# file: S_gen.txt # date: 2024-04-10 # version: IPD-IMGT/HLA 3.56.0 # origin: https://github.com/ANHIG/IMGTHLA/blob/Latest/alignments/S_gen.txt # repository: https://raw.githubusercontent.com/ANHIG/IMGTHLA/Latest/alignments/S_gen.txt # author: Steven G. E. Marsh (steven.marsh@ucl.ac.uk) gDNA 1 | S*01:01:01:01 CACCAAAGAC CAAAGCTAAC TTTGTATCTA CTATGTACCA AGTATGTCTT TACATACCGT GCAGTTGGTT CAGTCCTCAC ACCTGCTTTC TTCATGTTTC S*01:01:01:02 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- S*01:02:01:01 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- C--------- S*01:02:01:02 ********** ********** ********** ********** ********** ********** ********** ********** ********** ********** S*01:02:01:03 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- C--------- S*01:03 ---------- ---------- ---------- --------A- ---------- ---------- ---------- ---------- ---------- C--------- S*01:04 ---------- ---------- ---------- --------A- ---------- ---------- ---------- ---------- ---------- C--------- gDNA 101 | S*01:01:01:01 CTGCGCTGGG TCTGCAGTCA CAGTTTTGGA AACTTCTCTG GGGTCCAAGA CTAGGGGGTT CCTCTAGGAC CTCATGGCCC TGTCTCTTCC CTAGCCCCTC S*01:01:01:02 ----C----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- S*01:02:01:01 ----C----- -----C---- ---------- ---------- ---------- ---------- ---------- ---------- ------C--- ---------- S*01:02:01:02 ********** ********** ********** ********** ********** ****------ ----CTA--- ---------- ------C--- ---------- S*01:02:01:03 ----C----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ------C--- ---------- S*01:03 ----C----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ------C--- ---------- S*01:04 ----C----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ------C--- ---------- gDNA 201 | S*01:01:01:01 ACAGGATGAT TTCTTCCCAG AG | GCAGAGAA GGAGGTGCTC AGGCTGTGT | G TAACTATGGG AGACAGATGT GGAGGAGCTC ACCTATGCCA TAATTCCTCC S*01:01:01:02 ---------- ---------- -- | -------- ---------- --------- | - ---------- ----G----- ---------- ---------- ---------- S*01:02:01:01 ---------- ---------- -- | -------- ---------- --------- | - ---------- ----G----- ---------- ---------- ---------- S*01:02:01:02 ---------- ---------- -- | -------- ---------- --------- | - ---------- ----G----- ---------- ---------- ---------- S*01:02:01:03 ---------- ---------- -- | -------- ---------- --------- | - ---------- ----G----- ---------- ---------- ---------- S*01:03 ---------- ---------- -- | -------- ---------- --------- | - ---------- ----G----- ---------- ---------- ---------- S*01:04 ---------- ---------- -- | -------- ---------- --------- | - ---------- ----G----- ---------- ---------- ---------- gDNA 301 | S*01:01:01:01 TCTCCCACAT CTCCTGCAGG CTCTGACCGG GTCCTGTTTT TGTTCTACCC CAG | GCAGTGA CAGTGACCAG GGCTGTGATG TGTCTCTCAC AGCTTGTAAA S*01:01:01:02 ---------- ---------- ---------- ---------- ---------- --- | ------- ---------- ---------- ---------- ---------- S*01:02:01:01 ---------- ---------- --------A- ---------- ---------- --- | ------- ---------- ---------- ---------- ---------- S*01:02:01:02 ---------- ---------- --------A- ---------- ---------- --- | ------- ---------- ---------- ---------- ---------- S*01:02:01:03 ---------- ---------- --------A- ---------- ---------- --- | ------- ---------- ---------- ---------- ---------- S*01:03 ---------- ---------- --------A- ---------- ---------- --- | ------- ---------- ---------- ---------- ---------- S*01:04 ---------- ---------- --------A- ---------- ---------- --- | ------- ---------- ---------- ---------- ---------- gDNA 401 | S*01:01:01:01 G | GTGGCGTCC TGGAGGGCCT TATGTGGAAG GGGGATGGGG TACAGGGGAC AAGACTGGAT TACGGTGATT CTTTGGGACA CTTTGAGTGT GTAGTGGGGA S*01:01:01:02 - | --------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- S*01:02:01:01 - | --------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- S*01:02:01:02 - | --------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- S*01:02:01:03 - | --------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- S*01:03 - | --------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ------A--- S*01:04 - | --------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ------A--- gDNA 501 | S*01:01:01:01 GTTCAGAGTG TTACGCTTTA TGGCCACTGA CCTGAATTTG TTCATGACTA TTGTTTTCTG TAG | CCTGAGG CAGCTGTCTT GTGAGGGACT GAGATGCAGG S*01:01:01:02 ---------- ---------- ---------- ---------- ---------- ---------- --- | ------- ---------- ---------- ---------- S*01:02:01:01 ---------- ---------- ---------- ---------- ---------- ---------- --- | ------- ---------- ---------- ---------T S*01:02:01:02 ---------- ---------- ---------- ---------- ---------- ---------- --- | ------- ---------- ---------- ---------T S*01:02:01:03 ---------- ---------- ---------- ---------- ---------- ---------- --- | ------- ---------- ---------- ---------T S*01:03 ---------- ---------- ---------- ---------- ---------- ---------- --- | ------- ---------- ---------- ---------- S*01:04 ---------- ---------- ---------- ---------- ---------- ---------- --- | ------- ---------- ---------- ---------- gDNA 601 | S*01:01:01:01 ATTTCTTCAT GCCGCCCCTT TGTGACTTCA GGAGCCTCTG GTGTCTCTTT CTGCAAAGGC ATCTGAATGT GTCTGTGTCC CTGTTAGCCT AGTGTGAGGA S*01:01:01:02 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- S*01:02:01:01 ---------- ---T------ ---------- A--------- ---------- ---------- ---------- -----C---- ---------- -A------A- S*01:02:01:02 ---------- ---T------ ---------- A--------- ---------- ---------- ---------- -----C---- ---------- -A------A- S*01:02:01:03 ---------- ---T------ ---------- A--------- ---------- ---------- ---------- -----C---- ---------- -A------A- S*01:03 ---------C ---T------ ---------- A--------- ---------- ---------- ---------- -----C---- ---------- -A------A- S*01:04 ---------- ---T------ ---------- A--------- ---------- ---------- ---------- -----C---- ---------- -A------A- gDNA 701 | S*01:01:01:01 GGTGGAGAGA CCAGCCCTCC CCCATGTCTA CCATGACCCC CTTCCCCATG CTGA | ATTAGC TGACTTTACA AAAAGAAAAT TACCATCAAT AATGTGGATG S*01:01:01:02 ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- ---------- ---------- ---------- S*01:02:01:01 ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- ---------- ---------- ---------- S*01:02:01:02 ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- ---------- ---------- ---------- S*01:02:01:03 ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- ---------- ---------- ---------- S*01:03 ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- ---------- ---------- ---------- S*01:04 ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- ---------- ---------- ---------- gDNA 801 | S*01:01:01:01 GGCCTCATCC GATCAGTAGA AGACTCTGAG AGCAGAAACT GAGGTTTCCC AGAGAAGAAG AAATCCTGCC TCAG S*01:01:01:02 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---- S*01:02:01:01 ---T---C-- ---------- ---------- ---------- ---------- ---------- ---------- ---- S*01:02:01:02 ---T---C-- ---------- ---------- ---------- ---------- ---------- ---------- ---- S*01:02:01:03 ---T---C-- ---------- ---------- ---------- ---------- ---------- ---------- ---- S*01:03 ---T---C-- ---------- ---------- ---------- ---------- ---------- --------** **** S*01:04 ---T---C-- ---------- ---------- ---------- ---------- ---------- --------** **** Please see http://hla.alleles.org/terms.html for terms of use.