# file: U_gen.txt # date: 2024-04-10 # version: IPD-IMGT/HLA 3.56.0 # origin: https://github.com/ANHIG/IMGTHLA/blob/Latest/alignments/U_gen.txt # repository: https://raw.githubusercontent.com/ANHIG/IMGTHLA/Latest/alignments/U_gen.txt # author: Steven G. E. Marsh (steven.marsh@ucl.ac.uk) gDNA 1 | U*01:01:01:01 AATCCTGTCC TGGTTATCTC CCCATTCTCT GTAAAAACGA TTCTCTGTAA A | AAGATTACA TCGCCCTAAA CGAGGACCTG AGCTCTTGGA CCGCGGCGGC U*01:01:01:02 ---------- ---------- ---------- ---------- ---------- - | --------- ---------- ---------- ---------- ---------- U*01:02 ---------- ---------- ---------- ---------- ---------- - | --------- ---------- ---------- ---------- ---------- U*01:03 ---------- ---------- ---------- -------G-- ---------- - | --------- ---------- G--------- ---------- ---------- U*01:04 ---------- ---------- ---------- -------G-- ---------- - | --------- ---------- -C-------- ---------- -T-------- U*01:05 ---------- ---------- ---------- -------G-- ---------- - | --------- ---------- ---------- ---------- ---------- U*01:06 ---------- ---------- ---------- ---------- ---------- - | --------- ---------- ---------- ---------- ---------- gDNA 101 | U*01:01:01:01 CATGGCGGCT CAGATTACCC AGCGCAAGTG GGAGGCGGCC CATGAGGCGG AGCAGCAGAG AGCCTACCTG GAGGGCACGT GCGTGGAGTG GCTCCGCAGA U*01:01:01:02 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- U*01:02 ---------- ---------- ---------- ---------- ---------- ---------- ---------A ---------- ---A------ ---------- U*01:03 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- U*01:04 ---------- ---------- ---------- ---------- ---------- ---------C ---------- -------G-- ---------- ---------- U*01:05 ---------- ---------- ---------- ---------- ---------- ---------C ---------- -------G-- ---------- ---------- U*01:06 ---------- ---------- ---------- ---------- ---------- ---------C ---------- ---------- --------A- ---------- gDNA 201 | U*01:01:01:01 TACCTGGAGA ACGGGAAGGA GACGCTGCAG CGCACTGGTA CCAGGGG | CCA CGGGGCGCCT CCCTGATCGC CTGTAGATCT CCCAGGCTGG CCTCCCACAA U*01:01:01:02 ---------- ---------- ---------- ---------- ------- | --- ---------- ---------- ---------- ---------- ---------- U*01:02 ---------- --A------- ---------- -------.-- ------- | --- ---------- ---------- ---------- -G-------- ---------- U*01:03 ---------- --A------- --T------- ---------- ------- | --- ---------- ---------- ---------- ---G------ ---------- U*01:04 ---------- --A------- ---A------ -A---CT--- ------A | --- -.-------- ---------- -----.---- ---G------ ---------- U*01:05 ---------- --A------- ---------- -A---CT--- ------A | --- -.-------- ---------- -----.---- ---G------ ---------- U*01:06 ---------- ---------- ---A------ ---------- -----A- | --- ---------- ---------- ---------- ---G------ ---------- gDNA 301 | U*01:01:01:01 GGAGAGGAGA CAGATGGGAC CAACACTAGA ATATCACCCT CCCTCTGGTC CTGAGGGAGA AGAATCCTCC TGGGTTTCCA GATCCTGTAC CAGAGAGTGA U*01:01:01:02 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- U*01:02 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- U*01:03 ----G----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- U*01:04 ---TG----- ---------- ---------- ---------- ---------- ---------- ---------- -CA------- ---------- ---------- U*01:05 ---TG----- ---------- ---------- ---------- --T------- ---------- ---------- --A------- ---------- ---------- U*01:06 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 401 | U*01:01:01:01 CTCTGAGGTT CCACCCTGCT CTCTGACA.. .......... .......... .......... .........T AATTAAGGGA TAAAATCTCT GAGGGAATGA U*01:01:01:02 ---------- ---------- --------CA ATTAAGGGAT AAAATCTCTG AGGCAATGAC GGGAAGACGC ---------- ---------- ---------- U*01:02 ---------- ---------- --------CA ATTAAGGGAT AAAATCTCTG AGGCAATGAC GGGAAGACGC ---------- ---------- ---------- U*01:03 ---------- ---------- --------CA ATTAAGGGAT AAAATCTCTG AGGCAATGAC GGGAAGACGC ---------- ---------- ---------- U*01:04 ---------- ----A----- --------CA ATTAAGGGAT AAAATCTCTG AGGCAATGAC GGGAAGACGC ---------- ---------- ---------- U*01:05 ---------- ---------- --------CA ATTAAGGGAT AAAATCTCTG AGGCAATGAC GGGAAGATGC ---------- ---------- ---------- U*01:06 ---------- ----A----- --------CA ATTAAGGGAT AAAATCTCTG AGGCAATGAC GGGAAGACTC ---------- ---------- ---------- gDNA 460 | U*01:01:01:01 CGGGAAGACG ATCCCTCATT TAGTGATCCC AAGTCACTAA ATTTGGGAGT AGTTTGTTAC ACAGCAATGG ATAACTAATG AAGCCCT*** ********** U*01:01:01:02 --------A- ---------- ---------- ---------- -------G-- ---------- ---------- ---------- -------*** ********** U*01:02 ---------- ---------- ---------- ---------- -------G-- ---------- ---------- ---------- -------*** ********** U*01:03 -T-------- ---------- ---------- ---------- -------G-- ---------- ---------- ---------- -------CTT ACATTTCCAT U*01:04 ------C--- ---------- ---------- ---------- ---------- ---------- ---------- ---------- -------CTT ACATTTCCAT U*01:05 ------C--- ---------- ---------- ---------- ---------- ---------- ---------- ---------- -------CTT ACATTTCCAT U*01:06 -T-----GT- ---------- ---------- ---------- -------G-- ---------- ---------- ---------- -------CTT ACATTTCCAT gDNA 560 | U*01:01:01:01 ********** ********** ********** ********** ********** ********** ********** ********** ********** ********** U*01:01:01:02 ********** ********** ********** ********** ********** ********** ********** ********** ********** ********** U*01:02 ********** ********** ********** ********** ********** ********** ********** ********** ********** ********** U*01:03 TATTCTCTAG AGGTTAACTA CATCTGTTTT ATTTTCTCCT ATTTTGATAA TATTAGCCAC ACATAGGTTT CTAGTTTCTC AACACCTATT CTTTTCTTTA U*01:04 TATTCTCTAG AGGTTAACTA CATCTGTTTT ATTTTCTCCT ATTTTGATAA TATTAGCCAC ACATAGGTTT CTAGTTTCTC AACACCTATT CTTTTCTTTA U*01:05 TATTCTCTAG AGGTTAACTA CATCTGTTTT ATTTTCTCCT ATTTTGATAA TATTAGCCAC ACAGAGGTTT CTAGTTTCTC AACACCTATT CTTTTCTTTA U*01:06 TATTCTCTAG AGGTTAACTA CATTTGTTTT ATTTTCTCCT ATTTTGATAA TATTAGCCAC ACATAGGTTT CTAGTTTCTC AACACCTATT CTTTTCTTTA gDNA 660 | U*01:01:01:01 ********** ********** ********** ** U*01:01:01:02 ********** ********** ********** ** U*01:02 ********** ********** ********** ** U*01:03 TTTTAGTTTC TTTTCTCCTT TGTTCCATCC TT U*01:04 TTTTAGTTTC TTTTCTCCTT TGTTCCATCC TT U*01:05 TTTTAGTTTC TTTTCTCCTT TGTTCCATCC TT U*01:06 TTTTAGTTTC TTTTCTCCTT TGTTCCATCC TT Please see http://hla.alleles.org/terms.html for terms of use.