##################################################################################### ##################################################################################### set(THIS_TEST_NAME ANTS_EXP) set(OUTPUT_PREFIX ${CMAKE_BINARY_DIR}/TEST_${THIS_TEST_NAME} ) set(WARP ${OUTPUT_PREFIX}Warp.nii.gz ${OUTPUT_PREFIX}Affine.txt ) set(INVERSEWARP -i ${OUTPUT_PREFIX}Affine.txt ${OUTPUT_PREFIX}InverseWarp.nii.gz ) set(WARP_IMAGE ${CMAKE_BINARY_DIR}/${THIS_TEST_NAME}_warped.nii.gz) set(INVERSEWARP_IMAGE ${CMAKE_BINARY_DIR}/${THIS_TEST_NAME}_inversewarped.nii.gz) add_test(NAME ${THIS_TEST_NAME} COMMAND ANTS 2 -m PR[${R16_IMAGE},${R64_IMAGE},1,4] -r Gauss[0.5,0.25] -t Exp[0.5,2,0.5] -i 50x50x50 -o ${OUTPUT_PREFIX}.nii.gz ) add_test(NAME ${THIS_TEST_NAME}_WARP COMMAND WarpImageMultiTransform 2 ${R64_IMAGE} ${WARP_IMAGE} ${WARP} -R ${R16_IMAGE} ) set_property(TEST ${THIS_TEST_NAME}_WARP APPEND PROPERTY DEPENDS ${THIS_TEST_NAME}) add_test(NAME ${THIS_TEST_NAME}_JPG COMMAND ConvertToJpg ${WARP_IMAGE} ${THIS_TEST_NAME}.jpg) set_property(TEST ${THIS_TEST_NAME}_JPG APPEND PROPERTY DEPENDS ${THIS_TEST_NAME}_WARP) # add_test(NAME ${THIS_TEST_NAME}_WARP_METRIC_0 COMMAND MeasureImageSimilarity 2 0 # ${R16_IMAGE} ${WARP_IMAGE} # ${OUTPUT_PREFIX}log.txt ${OUTPUT_PREFIX}metric.nii.gz # 14.3283 0.05) # set_property(TEST ${THIS_TEST_NAME}_WARP_METRIC_0 APPEND PROPERTY DEPENDS ${THIS_TEST_NAME}_WARP) # # add_test(NAME ${THIS_TEST_NAME}_WARP_METRIC_1 COMMAND MeasureImageSimilarity 2 1 # ${R16_IMAGE} ${WARP_IMAGE} ${OUTPUT_PREFIX}log.txt # ${OUTPUT_PREFIX}metric.nii.gz # 0.996139 0.05) # set_property(TEST ${THIS_TEST_NAME}_WARP_METRIC_1 APPEND PROPERTY DEPENDS ${THIS_TEST_NAME}_WARP) # # add_test(NAME ${THIS_TEST_NAME}_WARP_METRIC_2 COMMAND MeasureImageSimilarity 2 2 # ${R16_IMAGE} ${WARP_IMAGE} ${OUTPUT_PREFIX}log.txt # ${OUTPUT_PREFIX}metric.nii.gz # -1.14716 0.05) # set_property(TEST ${THIS_TEST_NAME}_WARP_METRIC_2 APPEND PROPERTY DEPENDS ${THIS_TEST_NAME}_WARP) add_test(NAME ${THIS_TEST_NAME}_INVERSEWARP COMMAND WarpImageMultiTransform 2 ${R16_IMAGE} ${INVERSEWARP_IMAGE} ${INVERSEWARP} -R ${R16_IMAGE} ) set_property(TEST ${THIS_TEST_NAME}_INVERSEWARP APPEND PROPERTY DEPENDS ${THIS_TEST_NAME}) # add_test(NAME ${THIS_TEST_NAME}_INVERSEWARP_METRIC_0 COMMAND MeasureImageSimilarity 2 0 ${R64_IMAGE} # ${INVERSEWARP_IMAGE} ${OUTPUT_PREFIX}log.txt ${OUTPUT_PREFIX}metric.nii.gz # 50.4483 0.05) # set_property(TEST ${THIS_TEST_NAME}_INVERSEWARP_METRIC_0 APPEND PROPERTY DEPENDS ${THIS_TEST_NAME}_INVERSEWARP) # # add_test(NAME ${THIS_TEST_NAME}_INVERSEWARP_METRIC_1 COMMAND MeasureImageSimilarity 2 1 ${R64_IMAGE} # ${INVERSEWARP_IMAGE} ${OUTPUT_PREFIX}log.txt ${OUTPUT_PREFIX}metric.nii.gz # 1.0 0.05) # set_property(TEST ${THIS_TEST_NAME}_INVERSEWARP_METRIC_1 APPEND PROPERTY DEPENDS ${THIS_TEST_NAME}_INVERSEWARP) # # add_test(NAME ${THIS_TEST_NAME}_INVERSEWARP_METRIC_2 COMMAND MeasureImageSimilarity 2 2 ${R64_IMAGE} # ${INVERSEWARP_IMAGE} ${OUTPUT_PREFIX}log.txt ${OUTPUT_PREFIX}metric.nii.gz # 0.379897 0.05) # set_property(TEST ${THIS_TEST_NAME}_INVERSEWARP_METRIC_2 APPEND PROPERTY DEPENDS ${THIS_TEST_NAME}_INVERSEWARP)