--- api_key: admin galaxy_instance: http://localhost:8080 install_resolver_dependencies: true install_tool_dependencies: false tools: # amplicon_sequence_processing - name: 'suite_mothur' owner: 'iuc' tool_panel_section_id: 'amplicon_sequence_processing' install_resolver_dependencies: false - name: 'suite_qiime' owner: 'iuc' tool_panel_section_id: 'amplicon_sequence_processing' install_resolver_dependencies: false - name: 'data_manager_qiime_database_downloader' owner: 'iuc' tool_panel_section_id: 'amplicon_sequence_processing' install_resolver_dependencies: false # metagenomics_manipulation - name: 'vsearch' owner: 'iuc' tool_panel_section_id: 'metagenomics_manipulation' - name: 'nonpareil' owner: 'iuc' tool_panel_section_id: 'metagenomics_manipulation' install_resolver_dependencies: false # assembly - name: 'megahit' owner: 'iuc' tool_panel_section_id: 'assembly' install_resolver_dependencies: false - name: 'metaspades' owner: 'nml' tool_panel_section_id: 'assembly' install_resolver_dependencies: false - name: 'quast' owner: 'iuc' tool_panel_section_id: 'assembly' install_resolver_dependencies: false - name: 'valet' owner: 'iuc' tool_panel_section_id: 'assembly' install_resolver_dependencies: false # wgs_taxonomic_assignations - name: 'suite_metaphlan2' owner: 'iuc' tool_panel_section_id: 'wgs_taxonomic_assignations' - name: 'format_metaphlan2_output' owner: 'bebatut' tool_panel_section_id: 'wgs_taxonomic_assignations' - name: 'suite_kraken_0_10_5' owner: 'devteam' tool_panel_section_id: 'wgs_taxonomic_assignations' install_resolver_dependencies: false