# claude-obsidian: Agent Instructions claude-obsidian is a local-first Agent Skills package for building source-cited, compounding Obsidian knowledge bases. It also ships a Claude Code plugin adapter. The portable workflow is implemented in `skills/` and the standard-library `claude_obsidian/` core; host hooks never define knowledge behavior. ## Product and vault boundaries - This repository is the product source. It is not the default user vault. - A user vault is the directory containing `.claude-obsidian.json`, `wiki/`, and `.raw/`. Mutable state always belongs there. - `templates/vault/` is the distributable seed. Root `wiki/`, `.raw/`, and `.vault-meta/` are contributor state and are excluded from public artifacts. - Never derive a user vault from the plugin cache or `${CLAUDE_PLUGIN_ROOT}`. - A checkout containing contributor-vault state has no marketplace catalog. `config/public-marketplace.json` is injected as `.claude-plugin/marketplace.json` only inside the audited release artifact. An extracted distribution-clean artifact may retain that exact manifest and rebuild idempotently. A public default branch must be populated from the clean artifact, never by pushing contributor-vault state. Resolve a vault in this order: explicit `--vault`, `CLAUDE_OBSIDIAN_VAULT`, nearest `.claude-obsidian.json`, then an unambiguous vault at or above the current directory. Fail closed when no vault is selected. ## Bootstrap 1. Read this file. In a development checkout, also read the host-only root `CLAUDE.md` when present; release artifacts intentionally omit it. 2. Read the selected skill completely. 3. Read only the references that skill routes to. 4. Resolve the user vault. If `wiki/hot.md` exists, read it silently. 5. For a new vault, run `python3 scripts/claude-obsidian.py init PATH` first; apply only after reviewing the dry run. Use `adopt` for an existing vault. ## Canonical skills All 15 skills live at `skills//SKILL.md`. They use the portable Agent Skills frontmatter subset: exactly `name` and `description`. Do not add mirrored files under `commands/`; Claude invokes plugin skills by namespaced names such as `/claude-obsidian:wiki`. Core workflows are `wiki`, `save`, `wiki-ingest`, `wiki-query`, and `wiki-lint`. Extensions are `autoresearch`, `canvas`, `defuddle`, `wiki-fold`, `wiki-mode`, `wiki-retrieve`, and `wiki-cli`. Reference skills are `obsidian-markdown`, `obsidian-bases`, and `think`. ## Mutation protocol One logical knowledge operation is one recoverable transaction: 1. Read targets and record expected SHA-256 values. 2. Let parallel workers return drafts and evidence only. 3. Merge drafts into one `claude-obsidian.transaction.v1` bundle. 4. Inspect the bundle, then apply it once through `scripts/claude-obsidian.py`. 5. Report the operation ID and exact changed paths. Do not use direct shared writes, the deprecated `wiki-lock.sh` helper, or generic lifecycle auto-commits. Git checkpointing is separate and explicit. Raw source payloads are create-only; `.raw/.manifest.json` is the only mutable legacy raw metadata file. Destructive repairs, remote egress, and canonical research merges require explicit consent. ## Vault conventions - `inbox/`: visible capture intake; never deleted automatically. - `.raw/`: immutable source payloads and legacy delta manifest. - `wiki/`: generated knowledge pages. - `wiki/meta/ledgers/`: source and claim provenance. - `wiki/hot.md`: bounded recent context, never a transcript. - `wiki/log.md`: operation history, newest first. - `.vault-meta/`: ignored runtime locks, journals, indexes, queues, and config. Use Obsidian Flavored Markdown: flat YAML properties, `YYYY-MM-DD` dates, wikilinks, embeds, and valid callouts. Never fabricate evidence locators, quotations, page numbers, or confidence. ## Verification Run `make test` after behavioral changes. It executes every Python and shell suite plus the product, capability, package, hook, and manifest contracts. Public artifacts are built locally with `release build` and audited without publishing. No agent may push, tag, open or mutate issues, or publish a release without explicit owner approval. Claude SessionStart context injection is disabled by default. Treat `CLAUDE_OBSIDIAN_SESSION_CONTEXT=1` as explicit user consent to place bounded `wiki/hot.md` data in the model context; never set it automatically. A workspace-configured vault outside the project also requires an exact `CLAUDE_OBSIDIAN_SESSION_CONTEXT_VAULT` path. ## Reference - Public canonical repository: https://github.com/AgriciDaniel/claude-obsidian - LLM Wiki pattern: https://gist.github.com/karpathy/442a6bf555914893e9891c11519de94f - Obsidian primitives: https://github.com/kepano/obsidian-skills