# MetalAA route settings; declare method=metalaa in #parmfit(...) and reference this file via input= # Only non-default entries are listed; the generated parmfitrun.in shows every resolved value. ion_resids=A462 ion_charges=3 ion_mults=6 lig_resids=A461 lig_charges=-4 bonded=seminario chg_level=PBE1PBE/def2SV # Wider automatic environment: residues with any atom within 5.0 A of the metal # join the large model as RESP/MLIP context; core and site model stay unchanged cluster_cutoff=5.0 # ILE401 (axial-loop heme-pocket neighbor) built through the native NCAA flow and renamed ILE->ILM; # its charges are frozen into the site RESP ncaa_resids=ILE401 ncaa_charges=0 ncaa_resnames=ILM ncaa_mults=1