Diffusion.Diffusion Data Conversion Version 1.0 http://wiki.slicer.org/slicerWiki/index.php/Documentation/4.1/Modules/DWIConverter https://www.nitrc.org/svn/brains/BuildScripts/trunk/License.txt Vince Magnotta (UIowa), Hans Johnson (UIowa), Joy Matsui (UIowa), Kent Williams (UIowa), Mark Scully (Uiowa), Xiaodong Tao (GE) Conversion Options conversionMode --conversionMode DicomToNrrd DicomToNrrd DicomToFSL NrrdToFSL FSLToNrrd inputVolume --inputVolume Input DWI Volume file input outputVolume -o --outputVolume Output DWI Volume file output Dicom To Nrrd Conversion Parameters inputDicomDirectory -i --inputDicomDirectory Input Dicom Data Directory input NiftiFSL To Nrrd Conversion Parameters inputBValues --inputBValues Input bval file input inputBVectors --inputBVectors Input bvec file input Nrrd To NiftiFSL Conversion Parameters outputBValues --outputBValues Output bval file output .bval)]]> outputBVectors --outputBVectors Output bvec file output .bvec)]]> Advanced Conversion Parameters fMRIOutput --fMRI Output fMRI file Output a NRRD file, but without gradients writeProtocolGradientsFile --writeProtocolGradientsFile Write Protocol Gradients File false useIdentityMeaseurementFrame --useIdentityMeaseurementFrame Use Identity Measurement Frame false useBMatrixGradientDirections --useBMatrixGradientDirections Use BMatrix Gradient Directions false outputDirectory --outputDirectory Output Directory output . gradientVectorFile --gradientVectorFile Gradient Vector File output smallGradientThreshold --smallGradientThreshold Small Gradient Threshold 0.2