description: domain/bacteria

full scientific name: Micromonospora chaiyaphumensis Jongrungruangchok et al. 2008

species: Micromonospora chaiyaphumensis

description: Micromonospora chaiyaphumensis gene for 16S rRNA, partial sequence, strain: MC7-1


Matching level: species

class: Actinomycetes

description: domain/bacteria

domain: Bacteria

family: Micromonosporaceae

genus: Micromonospora

keyword: phylum/actinomycetota

order: Micromonosporales

phylum: Actinomycetota

class: Actinobacteria

phylum: Actinobacteria

type strain: no

database: nuccore

description: Micromonospora chaiyaphumensis gene for 16S rRNA, partial sequence, strain: R1-1


class: Halobacteria

description: domain/archaea

domain: Archaea

family: Natrialbaceae

full scientific name: Natrinema saccharevitans (Xu et al. 2005) de la Haba et al. 2022

genus: Natrinema

keyword: phylum/methanobacteriota

order: Halobacteriales

phylum: Methanobacteriota

species: Natrinema saccharevitans

synonym: Natrinema saccharevitans

synonym: Haloterrigena saccharevitans

full scientific name: Haloterrigena saccharevitans Xu et al. 2005

genus: Haloterrigena

order: Natrialbales

phylum: Euryarchaeota

species: Haloterrigena saccharevitans

type strain: yes

description: Haloterrigena saccharevitans strain AB14 16S ribosomal RNA gene, partial sequence

description: Haloterrigena saccharevitans gene for 16S rRNA, complete sequence, strain: JCM 12889.


Matching level: strain

description: domain/archaea

full scientific name: Natrinema altunense Xu et al. 2005

species: Natrinema altunense

description: Natrinema altunense strain AJ2 16S ribosomal RNA gene, partial sequence

description: Natrinema altunense gene for 16S rRNA, complete sequence, strain: JCM 12890.

assembly level: contig

description: ASM33715v1 assembly for Natrinema altunense JCM 12890

description: ASM73198v1 assembly for Natrinema altunense AJ2


class: Bacilli

description: domain/bacteria

family: Bacillaceae

full scientific name: Geobacillus kaustophilus (Priest et al. 1989 ex Prickett 1928) Nazina et al. 2001

genus: Geobacillus

keyword: phylum/bacillota

order: Caryophanales

phylum: Bacillota

species: Geobacillus kaustophilus

synonym: Bacillus kaustophilus

full scientific name: Geobacillus kaustophilus (Priest et al. 1989) Nazina et al. 2001

phylum: Firmicutes

description: Low G+C Gram-positive bacterium HTA426 gene for 16S rRNA, partial sequence

assembly level: complete

description: ASM978v1 assembly for Geobacillus kaustophilus HTA426


description: domain/bacteria

full scientific name: Geobacillus stearothermophilus (Donk 1920) Nazina et al. 2001

species: Geobacillus stearothermophilus

synonym: Bacillus stearothermophilus

description: Low G+C Gram-positive bacterium HTA462 gene for 16S rRNA, partial sequence


class: Bacteroidia

description: domain/bacteria

family: Tannerellaceae

full scientific name: Parabacteroides distasonis (Eggerth and Gagnon 1933) Sakamoto and Benno 2006

genus: Parabacteroides

keyword: phylum/bacteroidota

order: Bacteroidales

phylum: Bacteroidota

species: Parabacteroides distasonis

synonym: Bacteroides distasonis

phylum: Bacteroidetes

description: Parabacteroides distasonis gene for 16S ribosomal RNA, partial sequence, strain: JCM 1294


description: domain/bacteria

family: Prevotellaceae

full scientific name: Prevotella multisaccharivorax Sakamoto et al. 2005

genus: Prevotella

species: Prevotella multisaccharivorax

synonym: Hallella multisaccharivorax


class: Clostridia

description: domain/bacteria

family: Oscillospiraceae

full scientific name: Ethanoligenens harbinense Xing et al. 2006

genus: Ethanoligenens

order: Eubacteriales

species: Ethanoligenens harbinense

description: Ethanoligenens harbinense strain W-1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Bacteroidaceae

full scientific name: Phocaeicola plebeius (Kitahara et al. 2005) García-López et al. 2020

genus: Phocaeicola

species: Phocaeicola plebeius

synonym: Bacteroides plebeius

full scientific name: Phocaeicola plebeius (Kitahara et al. 2005) Garc¡a-L¢pez et al. 2020

description: Bacteroides plebeius gene for 16S rRNA, partial sequence, strain: M14


description: domain/bacteria

description: Bacteroides plebeius gene for 16S rRNA, partial sequence, strain: M35


description: domain/bacteria

description: Bacteroides plebeius gene for 16S rRNA, partial sequence, strain: M122


description: domain/bacteria

description: Bacteroides plebeius gene for 16S rRNA, partial sequence, strain: M131


description: domain/bacteria

description: Bacteroides plebeius gene for 16S rRNA, partial sequence, strain: M132


description: domain/bacteria

full scientific name: Phocaeicola coprocola (Kitahara et al. 2005) García-López et al. 2020

species: Phocaeicola coprocola

synonym: Bacteroides coprocola

full scientific name: Phocaeicola coprocola (Kitahara et al. 2005) Garc¡a-L¢pez et al. 2020

description: Bacteroides coprocola gene for 16S rRNA, partial sequence, strain: M11


description: domain/bacteria

description: Bacteroides coprocola gene for 16S rRNA, partial sequence, strain: M158


description: domain/bacteria

full scientific name: <I>Candidatus</I> Bacteroides massiliensis corrig. Drancourt et al. 2004

genus: Bacteroides

species: Bacteroides massiliensis

synonym: Bacteroides massiliae

synonym: Bacteroides massiliensis

synonym: Phocaeicola massiliensis

full scientific name: Phocaeicola massiliensis (Fenner et al. 2005) Garc¡a-L¢pez et al. 2020

species: Phocaeicola massiliensis

description: Bacteroides massiliensis gene for 16S rRNA, partial sequence, strain: EG4-8-2

description: Bacteroides massiliensis strain JCM12982 16S ribosomal RNA gene, partial sequence.


description: domain/archaea

full scientific name: Natronobacterium lacisalsi (Xu et al. 2005) Dong et al. 2025

genus: Natronobacterium

species: Natronobacterium lacisalsi

synonym: Halobiforma lacisalsi

full scientific name: Halobiforma lacisalsi Xu et al. 2005

genus: Halobiforma

species: Halobiforma lacisalsi

description: Halobiforma lacisalsi strain AJ5 16S ribosomal RNA gene, partial sequence

description: Halobiforma lacisalsi gene for 16S rRNA, complete sequence, strain: JCM 12983.

description: ASM22697v3 assembly for Natronobacterium lacisalsi AJ5

description: ASM33665v1 assembly for Natronobacterium lacisalsi AJ5


class: Betaproteobacteria

description: domain/bacteria

family: Comamonadaceae

full scientific name: Comamonas testosteroni (Marcus and Talalay 1956) Tamaoka et al. 1987

genus: Comamonas

keyword: phylum/pseudomonadota

order: Burkholderiales

phylum: Pseudomonadota

species: Comamonas testosteroni

synonym: Pseudomonas testosteroni

phylum: Proteobacteria

description: Comamonas testosteroni JCM 13048 gene for 16S rRNA, partial sequence


class: Gammaproteobacteria

description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)

genus: Pseudomonas

order: Pseudomonadales

species: Pseudomonas aeruginosa

synonym: Pseudomonas paraeruginosa

synonym: Bacterium aeruginosum

description: Pseudomonas aeruginosa JCM 13050 gene for 16S rRNA, partial sequence


description: domain/bacteria

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900

description: Pseudomonas aeruginosa strain P-6 16S ribosomal RNA gene, partial sequence

description: Pseudomonas aeruginosa strain P6 16S ribosomal RNA gene, partial sequence

description: Pseudomonas aeruginosa JCM 13051 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 13052 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 13053 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 13054 gene for 16S rRNA, partial sequence

description: ASM1334357v1 assembly for Pseudomonas aeruginosa DVT401


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 13055 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 13056 gene for 16S rRNA, partial sequence


description: domain/bacteria

full scientific name: Pseudomonas fluorescens Migula 1895 (Approved Lists 1980)

species: Pseudomonas fluorescens

full scientific name: Pseudomonas fluorescens Migula 1895

description: Pseudomonas fluorescens gene for 16S rRNA, partial sequence, strain: NBRC 3507

description: Pseudomonas fluorescens JCM 13057 gene for 16S rRNA, partial sequence

description: Pseudomonas fluorescens 16S rRNA gene, partial sequence


description: domain/bacteria

description: Pseudomonas fluorescens JCM 13059 gene for 16S rRNA, partial sequence


Matching level: subspecies

description: domain/bacteria

full scientific name: Pseudomonas jessenii subsp. pseudoputida Kosina et al. 2013

full scientific name: Pseudomonas putida (Trevisan 1889) Migula 1895

species: Pseudomonas putida

description: Pseudomonas putida 16S ribosomal RNA gene, partial sequence

description: Pseudomonas putida JCM 13062 gene for 16S rRNA, partial sequence


description: domain/bacteria

family: Streptosporangiaceae

full scientific name: Sphaerisporangium melleum corrig. Ara and Kudo 2007

genus: Sphaerisporangium

order: Streptosporangiales

species: Sphaerisporangium melleum

synonym: Sphaerosporangium melleum

full scientific name: Sphaerisporangium melleum Ara and Kudo 2007

description: Sphaerisporangium melleum gene for 16S rRNA, partial sequence, strain: 4-20(13)


description: domain/bacteria

description: Sphaerisporangium melleum gene for 16S rRNA, partial sequence, strain: 3D-70(20)


description: domain/bacteria

description: Sphaerisporangium melleum gene for 16S rRNA, partial sequence, strain: 5-81(36)


description: domain/bacteria

family: Nocardiaceae

full scientific name: Rhodococcus hoagii (Morse 1912) Kämpfer et al. 2014

genus: Rhodococcus

order: Mycobacteriales

species: Rhodococcus hoagii

synonym: Corynebacterium hoagii

synonym: Bacillus hoagii

full scientific name: Rhodococcus hoagii (Morse 1912) K„mpfer et al. 2014


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 13199 gene for 16S rRNA, partial sequence


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium pseudodiphtheriticum Lehmann and Neumann 1896 (Approved Lists 1980)

genus: Corynebacterium

species: Corynebacterium pseudodiphtheriticum


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 13200 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 13201 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 13202 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 13203 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 13204 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 13205 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 13206 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 13207 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 13208 gene for 16S rRNA, partial sequence


class: Thermodesulfovibrionia

description: domain/bacteria

family: Thermodesulfovibrionaceae

full scientific name: Thermodesulfovibrio islandicus Sonne-Hansen and Ahring 2000

genus: Thermodesulfovibrio

keyword: phylum/nitrospirota

order: Thermodesulfovibrionales

phylum: Nitrospirota

species: Thermodesulfovibrio islandicus

class: Nitrospira

family: Nitrospiraceae

order: Nitrospirales

phylum: Nitrospirae

description: Thermodesulfovibrio islandicus gene for 16S rRNA


class: Not assigned to order

family: Not assigned to family

full scientific name: Streptomyces vayuensis

genus: Streptomyces

order: Not assigned to order

phylum: Not assigned to order

species: Streptomyces vayuensis

description: Streptomyces vayuensis strain N2 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Moraxellaceae

full scientific name: <I>Acinetobacter</I> Brisou and Prévot 1954 (Approved Lists 1980)

genus: Acinetobacter

species: Acinetobacter sp.

full scientific name: <I>Acinetobacter</I> sp.

description: Acinetobacter psychrotolerans gene for 16S rRNA, strain: Ths


description: domain/bacteria

full scientific name: Tepidimonas arfidensis Ko et al. 2005

genus: Tepidimonas

species: Tepidimonas arfidensis

full scientific name: Tepidimonas arfidensis Ko et al.

description: Tepidimonas arfidensis gene for 16S rRNA, partial sequence

description: Tepidimonas arfidensis 16S ribosomal RNA gene, partial sequence

description: Tepidimonas arfidensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 13232


class: Alphaproteobacteria

description: domain/bacteria

family: Rhizobiaceae

full scientific name: Rhizobium mesosinicum Lin et al. 2009

genus: Rhizobium

order: Hyphomicrobiales

species: Rhizobium mesosinicum

description: Rhizobium mesosinicum strain CCBAU 41044 16S ribosomal RNA gene, partial sequence

description: Rhizobium mesosinicum strain CCBAU 41044 16S-23S ribosomal RNA intergenic spacer and 23S ribosomal RNA gene, partial sequence.


description: domain/bacteria

full scientific name: Corynebacterium xerosis (Lehmann and Neumann 1896) Lehmann and Neumann 1899 (Approved Lists 1980)

species: Corynebacterium xerosis

synonym: Bacillus xerosis

full scientific name: Corynebacterium xerosis Lehmann and Neumann 1899


description: domain/bacteria

family: Micromonosporaceae

full scientific name: Luedemannella helvata Ara and Kudo 2007

genus: Luedemannella

species: Luedemannella helvata

description: Luedemannella helvata gene for 16S rRNA, partial sequence, strain:3-21(27)


description: domain/bacteria

full scientific name: <I>Corynebacterium</I> Lehmann and Neumann 1896 (Approved Lists 1980)

species: Corynebacterium sp.

synonym: Turicella

synonym: Bacterionema

synonym: Caseobacter

full scientific name: <I>Corynebacterium</I> sp.

description: 55064_G01 assembly for Corynebacterium striatum NCTC9755


description: domain/bacteria

full scientific name: Bacteroides intestinalis Bakir et al. 2006

species: Bacteroides intestinalis

description: Bacteroides intestinalis gene for 16S rRNA, partial sequence, strain:JCM 13266

description: Bacteroides intestinalis strain JCM13266 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Brevibacteriaceae

full scientific name: Brevibacterium linens (Wolff 1910) Breed 1953 (Approved Lists 1980)

genus: Brevibacterium

order: Micrococcales

species: Brevibacterium linens

synonym: Bacterium linens


description: domain/bacteria

full scientific name: Bacteroides uniformis Eggerth and Gagnon 1933 (Approved Lists 1980)

species: Bacteroides uniformis

description: Bacteroides uniformis gene for 16S rRNA, partial sequence, isolate:mat-276


description: domain/bacteria

full scientific name: Bacteroides uniformis Eggerth and Gagnon 1933

description: Bacteroides uniformis gene for 16S rRNA, partial sequence, isolate:mat-281


description: domain/bacteria

description: Bacteroides uniformis gene for 16S rRNA, partial sequence, isolate:mat-344

description: ASM1883152v1 assembly for Bacteroides uniformis JCM13288


description: domain/bacteria

full scientific name: Pseudomonas plecoglossicida Nishimori et al. 2000

species: Pseudomonas plecoglossicida

description: Pseudomonas plecoglossicida JCM 13298 gene for 16S rRNA, partial sequence


description: domain/bacteria

family: Paenibacillaceae

full scientific name: <I>Paenibacillus</I> Ash et al. 1994

genus: Paenibacillus

species: Paenibacillus sp.

synonym: Aerobacillus

full scientific name: <I>Paenibacillus</I> sp.

description: Paenibacillus sp. MCRI 9 gene for 16S rRNA, partial sequence


description: domain/bacteria

full scientific name: Paenibacillus odorifer Berge et al. 2002

species: Paenibacillus odorifer

description: Paenibacillus odorifer gene for 16S rRNA, partial sequence


description: domain/bacteria

full scientific name: Paenibacillus macerans (Schardinger 1905) Ash et al. 1994

species: Paenibacillus macerans

synonym: Paenibacillus thermophilus

synonym: Aerobacillus macerans

synonym: Bacillus macerans

description: Paenibacillus macerans gene for 16S rRNA, partial sequence, strain: MCRI 12


description: domain/bacteria

description: Paenibacillus sp. MCRI 90 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Paenibacillus sp. MCRI 122 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Paenibacillus sp. MCRI 337 gene for 16S rRNA, partial sequence


class: Syntrophomonadia

description: domain/bacteria

family: Syntrophomonadaceae

full scientific name: Syntrophomonas erecta subsp. sporosyntropha Wu et al. 2006

genus: Syntrophomonas

order: Syntrophomonadales

description: Syntrophomonas erecta subsp. sporosyntropha strain 5-3-Z 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Micrococcaceae

full scientific name: <I>Pseudarthrobacter</I> Busse 2016

genus: Pseudarthrobacter

species: Pseudarthrobacter sp.

full scientific name: <I>Pseudarthrobacter</I> sp.


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Mediterraneibacter glycyrrhizinilyticus (Sakuma et al. 2006) Togo et al. 2019

genus: Mediterraneibacter

species: Mediterraneibacter glycyrrhizinilyticus

synonym: Clostridium glycyrrhizinilyticum

description: ASM131103v1 assembly for Mediterraneibacter glycyrrhizinilyticus JCM 13369


description: domain/bacteria

family: Tannerellaceae

full scientific name: Parabacteroides distasonis (Eggerth and Gagnon 1933) Sakamoto and Benno 2006

genus: Parabacteroides

species: Parabacteroides distasonis

synonym: Bacteroides distasonis

description: Parabacteroides distasonis gene for 16S ribosomal RNA, partial sequence, strain: JCM 13400


description: domain/bacteria

description: Parabacteroides distasonis gene for 16S ribosomal RNA, partial sequence, strain: JCM 13401


description: domain/bacteria

description: Parabacteroides distasonis gene for 16S ribosomal RNA, partial sequence, strain: JCM 13402


description: domain/bacteria

description: Parabacteroides distasonis gene for 16S ribosomal RNA, partial sequence, strain: JCM 13403


description: domain/bacteria

description: Parabacteroides distasonis gene for 16S ribosomal RNA, partial sequence, strain: JCM 13404


description: domain/bacteria

full scientific name: Parabacteroides merdae (Johnson et al. 1986) Sakamoto and Benno 2006

species: Parabacteroides merdae

synonym: Bacteroides merdae

description: Parabacteroides merdae gene for 16S ribosomal RNA, partial sequence, strain: JCM 13405


full scientific name: <I>Kiloninella</I> sp.

genus: Kiloninella

species: Kiloninella sp.

description: Kopriimonas byunsanensis strain KOPRI 13522 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Piscirickettsiaceae

full scientific name: Sulfurivirga caldicuralii Takai et al. 2006

genus: Sulfurivirga

order: Beggiatoales

species: Sulfurivirga caldicuralii

order: Thiotrichales

description: Sulfurivirga caldicuralii gene for 16S rRNA, partial sequence, strain: VW1


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium arupense Cloud et al. 2006

genus: Mycobacterium

species: Mycobacterium arupense

synonym: Mycolicibacter arupensis

full scientific name: Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018

genus: Mycolicibacter

species: Mycolicibacter arupensis

description: Mycobacterium arupense gene for 16S rRNA, partial sequence, strain:CST7052 (= GTC2730)


description: domain/bacteria

family: Microbacteriaceae

full scientific name: Curtobacterium citreum (Komagata and Iizuka 1964) Yamada and Komagata 1972 (Approved Lists 1980)

genus: Curtobacterium

species: Curtobacterium citreum

synonym: Curtobacterium albidum

synonym: Brevibacterium citreum

synonym: Brevibacterium albidum


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas marginalis (Brown 1918) Stevens 1925 (Approved Lists 1980)

genus: Pseudomonas

species: Pseudomonas marginalis

synonym: Bacterium marginale

synonym: Pseudomonas panacis

description: Pseudomonas marginalis partial 16S rRNA gene, strain LMG 2238

description: Pseudomonas marginalis JCM 13460 gene for 16S rRNA, partial sequence


description: domain/bacteria

family: Prevotellaceae

full scientific name: Prevotella copri Hayashi et al. 2007

genus: Prevotella

species: Prevotella copri

synonym: Segatella copri

description: Prevotella copri gene for 16S ribosomal RNA, partial sequence, strain: CB18


description: domain/bacteria

description: Prevotella copri gene for 16S ribosomal RNA, partial sequence, strain: CB23


description: domain/bacteria

description: Prevotella copri gene for 16S ribosomal RNA, partial sequence, strain: CB26


description: domain/bacteria

description: Prevotella copri gene for 16S ribosomal RNA, partial sequence, strain: CB28


description: domain/bacteria

full scientific name: <I>Microbacterium</I> Orla-Jensen 1919 (Approved Lists 1980)

genus: Microbacterium

species: Microbacterium sp.

synonym: Aureobacterium

synonym: Paramicrobacterium

full scientific name: <I>Microbacterium</I> sp.


description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: Alloscardovia criceti (Okamoto et al. 2007) Killer et al. 2013

genus: Alloscardovia

order: Bifidobacteriales

species: Alloscardovia criceti

synonym: Metascardovia criceti

description: Alloscardovia criceti gene for 16S ribosomal RNA, partial sequence, strain: JCM 13492


description: domain/bacteria

description: Alloscardovia criceti gene for 16S ribosomal RNA, partial sequence, strain: JCM 13494


description: domain/bacteria

family: Oxalobacteraceae

full scientific name: <I>Massilia</I> La Scola et al. 2000

genus: Massilia

species: Massilia sp.

synonym: Mokoshia

synonym: Naxibacter

full scientific name: <I>Massilia</I> sp.


description: domain/bacteria

family: Comamonadaceae

full scientific name: <I>Variovorax</I> Willems et al. 1991

genus: Variovorax

species: Variovorax sp.

full scientific name: <I>Variovorax</I> sp.


class: Thermoprotei

description: domain/archaea

family: Desulfurococcales, not assigned to family

full scientific name: Caldococcus noboribetus Aoshima et al. 1996

genus: Caldococcus

keyword: phylum/thermoproteota

order: Desulfurococcales

phylum: Thermoproteota

species: Caldococcus noboribetus

full scientific name: Caldococcus noboribetus

phylum: Crenarchaeota

description: Caldococcus noboribetus DNA for 16S rRNA, complete sequence


class: Thermococci

description: domain/archaea

family: Thermococcaceae

full scientific name: Thermococcus onnurineus Bae et al. 2006

genus: Thermococcus

order: Thermococcales

species: Thermococcus onnurineus

full scientific name: Thermococcus onnurineus Bae et al.

description: Thermococcus onnurineus strain NA1 16S ribosomal RNA gene, partial sequence

description: ASM1836v1 assembly for Thermococcus onnurineus NA1


description: domain/bacteria

family: Aeromonadaceae

full scientific name: Zobellella denitrificans Lin and Shieh 2006

genus: Zobellella

order: Aeromonadales

species: Zobellella denitrificans

description: Oceanimonas denitrificans strain F13-1 16S ribosomal RNA gene, partial sequence

description: ASM240748v1 assembly for Zobellella denitrificans F13-1


description: domain/bacteria

family: Chromatiaceae

full scientific name: <I>Marichromatium</I> Imhoff et al. 1998

genus: Marichromatium

order: Chromatiales

species: Marichromatium sp.

full scientific name: <I>Marichromatium</I> sp.


description: domain/bacteria

full scientific name: Microbacterium testaceum (Komagata and Iizuka 1964) Takeuchi and Hatano 1998

species: Microbacterium testaceum

synonym: Aureobacterium testaceum

synonym: Brevibacterium testaceum

synonym: Curtobacterium testaceum


description: domain/archaea

family: Halococcaceae

full scientific name: Halococcus thailandensis Namwong et al. 2007

genus: Halococcus

order: Halobacteriales

species: Halococcus thailandensis

description: Halococcus thailandensis gene for 16S rRNA, partial sequence

description: Halococcus thailandensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 13552.

description: Halococcus thailandensis gene for 16S rRNA, complete sequence, strain: JCM 13552.

description: ASM33671v1 assembly for Halococcus thailandensis JCM 13552


description: domain/archaea

description: Halococcus thailandensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 13553.


description: domain/archaea

family: Haloarculaceae

full scientific name: Haloarcula amylolytica Yang et al. 2007

genus: Haloarcula

species: Haloarcula amylolytica

description: Haloarcula amylolytica strain BD-3 16S ribosomal RNA (rrnA) gene, partial sequence

description: Haloarcula amylolytica strain BD-3 16S ribosomal RNA (rrnB) gene, partial sequence

description: Haloarcula amylolytica strain BD-3 16S ribosomal RNA (rrnC) gene, partial sequence

description: Haloarcula amylolytica gene for 16S ribosomal RNA, partial sequence, strain: JCM 13557.

description: ASM33661v1 assembly for Haloarcula amylolytica JCM 13557


description: domain/archaea

family: Halobacteriaceae

full scientific name: Halobacterium jilantaiense Yang et al. 2006

genus: Halobacterium

species: Halobacterium jilantaiense

description: Halobacterium jilantaiense gene for 16S ribosomal RNA, partial sequence, strain: JCM 13558

description: Halobacterium jilantaiense 16S ribosomal RNA gene, partial sequence

description: Halobacterium jilantaiense gene for 16S rRNA, complete sequence, strain: JCM 13558.

description: IMG-taxon 2617270915 annotated assembly for Halobacterium jilantaiense CGMCC 1.5337


description: domain/archaea

full scientific name: Halococcus qingdaonensis Wang et al. 2007

species: Halococcus qingdaonensis

description: Halococcus qingdaonensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 13587

description: Halococcus qingdaogense 16S ribosomal RNA gene, complete sequence

description: Halococcus qingdaonensis gene for 16S rRNA, complete sequence, strain: JCM 13587.

description: ASM2450823v1 assembly for Halococcus qingdaonensis CGMCC 1.4243


description: domain/bacteria

full scientific name: <I>Curtobacterium</I> Yamada and Komagata 1972 (Approved Lists 1980)

species: Curtobacterium sp.

full scientific name: <I>Curtobacterium</I> sp.


description: domain/bacteria

family: Bacteroidaceae

full scientific name: Phocaeicola barnesiae (Lan et al. 2006) García-López et al. 2020

genus: Phocaeicola

order: Bacteroidales

species: Phocaeicola barnesiae

synonym: Bacteroides barnesiae

full scientific name: Phocaeicola barnesiae (Lan et al. 2006) Garc¡a-L¢pez et al. 2020

description: Bacteroides barnesiae gene for 16S ribosomal RNA, partial seuqnece, strain: JCM 13653


description: domain/bacteria

description: Bacteroides barnesiae gene for 16S ribosomal RNA, partial seuqnece, strain: JCM 13654


description: domain/bacteria

description: Bacteroides barnesiae gene for 16S ribosomal RNA, partial seuqnece, strain: JCM 13655


description: domain/bacteria

description: Bacteroides barnesiae gene for 16S ribosomal RNA, partial seuqnece, strain: JCM 13656


description: domain/bacteria

full scientific name: Bacteroides gallinarum Lan et al. 2006

genus: Bacteroides

species: Bacteroides gallinarum

description: Bacteroides gallinarum gene for 16S ribosomal RNA, partial seuqnece, strain: JCM 13659.


description: domain/bacteria

family: Barnesiellaceae

full scientific name: Barnesiella viscericola Sakamoto et al. 2007

genus: Barnesiella

species: Barnesiella viscericola


description: domain/bacteria

family: Nocardioidaceae

full scientific name: Nocardioides simplex (Jensen 1934) O'Donnell et al. 1983

genus: Nocardioides

order: Propionibacteriales

species: Nocardioides simplex

synonym: Pimelobacter simplex

synonym: Arthrobacter simplex

synonym: Corynebacterium simplex

description: Nocardioides simplex 16S ribosomal RNA gene, partial sequence

description: Nocardioides simplex strain JCM 1367 16S-23S internal transcribed spacer, complete sequence


description: domain/bacteria

full scientific name: Clavibacter michiganensis subsp. michiganensis corrig. (Smith 1910) Davis et al. 1984

genus: Clavibacter

synonym: Clavibacter michiganense subsp. michiganense

synonym: Corynebacterium michiganense subsp. michiganense

full scientific name: Clavibacter michiganensis subsp. michiganensis (Smith 1910) Davis et al. 1984

description: Clavibacter michiganensis subsp. michiganensis gene for 16S rRNA, partial sequence


description: domain/bacteria

species: Clavibacter michiganensis subsp. michiganensis


description: domain/bacteria

full scientific name: <I>Plantibacter</I> Behrendt et al. 2002

genus: Plantibacter

species: Plantibacter sp.

full scientific name: <I>Plantibacter</I> sp.


family: Not assigned to family

full scientific name: Unidentified bacterium

genus: Not assigned to family

species: Unidentified bacterium

description: Brucella sp. HJ114 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Phocaeicola coprophilus (Hayashi et al. 2007) García-López et al. 2020

species: Phocaeicola coprophilus

synonym: Bacteroides coprophilus

full scientific name: Phocaeicola coprophilus (Hayashi et al. 2007) Garc¡a-L¢pez et al. 2020

description: Bacteroides coprophilus gene for 16S rRNA, partial sequence, strain: CB40 (= JCM 13816)

description: ASM131574v1 assembly for Phocaeicola coprophilus JCM 13816


description: domain/bacteria

description: Bacteroides coprophilus gene for 16S ribosomal RNA, partial sequence, strain: CB41 (= JCM 13817)

description: ASM131576v1 assembly for Phocaeicola coprophilus JCM 13817


class: Flavobacteriia

description: domain/bacteria

family: Crocinitomicaceae

full scientific name: Lishizhenia caseinilytica Lau et al. 2006

genus: Lishizhenia

order: Flavobacteriales

species: Lishizhenia caseinilytica

description: Lishizhenia caseinilytica gene for 16S rRNA, partial sequence


description: domain/bacteria

family: Shewanellaceae

full scientific name: Parashewanella spongiae (Yang et al. 2006) Xu et al. 2019

genus: Parashewanella

order: Alteromonadales

species: Parashewanella spongiae

synonym: Shewanella spongiae

description: Parashewanella spongiae strain HJ039 16S ribosomal RNA gene, partial sequence

assembly level: scaffold

description: ASM367633v1 assembly for Parashewanella spongiae KCTC 22492

description: ASM2328374v1 assembly for Parashewanella spongiae KCTC 22492

description: ASM435834v1 assembly for Parashewanella spongiae HJ039


description: domain/bacteria

family: Micrococcaceae

full scientific name: <I>Micrococcus</I> Cohn 1872 (Approved Lists 1980)

genus: Micrococcus

species: Micrococcus sp.

full scientific name: <I>Micrococcus</I> sp.

description: Micrococcus sp. B5W22-1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Streptomycetaceae

full scientific name: <I>Streptomyces</I> Waksman and Henrici 1943 (Approved Lists 1980)

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces sp.

synonym: Chainia

synonym: Actinacidiphila

synonym: Kitasatoa

synonym: Actinopycnidium

synonym: Elytrosporangium

synonym: Microellobosporia

synonym: Actinosporangium

synonym: Streptoverticillium

synonym: Microechinospora

synonym: Carbonactinospora

full scientific name: <I>Streptomyces</I> sp.

order: Streptomycetales

description: Streptomyces sp. B5W22-2 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: <I>Arthrobacter</I> Conn and Dimmick 1947 (Approved Lists 1980)

genus: Arthrobacter

species: Arthrobacter sp.

synonym: Crystallibacter

full scientific name: <I>Arthrobacter</I> sp.

description: Arthrobacter sp. ON14 partial 16S rRNA gene, isolate ON14


description: domain/bacteria

family: Sphaerotilaceae

full scientific name: <I>Aquabacterium</I> Kalmbach et al. 1999

genus: Aquabacterium

order: Burkholderiales

species: Aquabacterium sp.

full scientific name: <I>Aquabacterium</I> sp.

description: Aquabacterium hongkongensis strain CA5 16S ribosomal RNA gene, partial sequence

description: Aquabacterium sp. JCM 13878 gene for 16S rRNA, partial sequence


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas marginalis (Brown 1918) Stevens 1925 (Approved Lists 1980)

genus: Pseudomonas

order: Pseudomonadales

species: Pseudomonas marginalis

synonym: Bacterium marginale

synonym: Pseudomonas panacis

description: Pseudomonas marginalis JCM 13886 gene for 16S rRNA, partial sequence


description: domain/bacteria

full scientific name: Pseudomonas marginalis (Brown 1918) Stevens 1925

description: Pseudomonas marginalis JCM 13887 gene for 16S rRNA, partial sequence


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lactiplantibacillus plantarum subsp. plantarum (Orla-Jensen 1919) Zheng et al. 2020

genus: Lactiplantibacillus

order: Lactobacillales

description: Lactobacillus plantarum subsp. plantarum gene for 16S ribosomal RNA, partial sequence, strain: JCM 13898


description: domain/bacteria

species: Lactiplantibacillus plantarum subsp. plantarum

description: Lactobacillus plantarum subsp. plantarum gene for 16S ribosomal RNA, partial sequence, strain: JCM 13899


description: domain/bacteria

full scientific name: <I>Pseudomonas</I> Migula 1894 (Approved Lists 1980)

species: Pseudomonas sp.

synonym: Metapseudomonas

synonym: Zestomonas

synonym: Caenipseudomonas

synonym: Phytopseudomonas

synonym: Ectopseudomonas

synonym: Aquipseudomonas

synonym: Geopseudomonas

synonym: Flavimonas

synonym: Chryseomonas

full scientific name: <I>Pseudomonas</I> sp.

description: Pseudomonas sp. PE-2 gene for 16S rRNA, partial sequence


description: domain/bacteria

family: Sphingomonadaceae

full scientific name: <I>Sphingobium</I> Takeuchi et al. 2001

genus: Sphingobium

order: Sphingomonadales

species: Sphingobium sp.

synonym: Parasphingobium

synonym: Alterisphingobium

synonym: Yabuuchia

full scientific name: <I>Sphingobium</I> sp.

description: Sphingomonas sp. EK-1 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Sphingomonas sp. P3 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Sphingomonas sp. PW-1 gene for 16S rRNA, partial sequence


description: domain/bacteria

full scientific name: Sphingopyxis macrogoltabida (Takeuchi et al. 1993) Takeuchi et al. 2001

genus: Sphingopyxis

species: Sphingopyxis macrogoltabida

synonym: Sphingomonas macrogoltabida

synonym: Sphingomonas macrogoltabidus

synonym: Sphingomonas macrogolitabida

description: Sphingopyxis macrogoltabida gene for 16S rRNA, partial sequence

description: ASM130729v1 assembly for Sphingopyxis macrogoltabida EY-1


description: domain/bacteria

family: Lysobacteraceae

full scientific name: Stenotrophomonas maltophilia (Hugh 1981 ex Hugh and Ryschenkow 1961) Palleroni and Bradbury 1993

genus: Stenotrophomonas

order: Lysobacterales

species: Stenotrophomonas maltophilia

synonym: Stenotrophomonas africana

synonym: Xanthomonas maltophilia

synonym: Pseudomonas maltophilia

full scientific name: Stenotrophomonas maltophilia (Hugh 1981) Palleroni and Bradbury 1993

description: Stenotrophomonas maltophilia gene for 16S rRNA, partial sequence


description: domain/bacteria

family: Thermomonosporaceae

full scientific name: Actinomadura maheshkhaliensis Ara et al. 2008

genus: Actinomadura

order: Streptosporangiales

species: Actinomadura maheshkhaliensis

description: Actinomadura maheshkhaliensis gene for 16S rRNA, partial sequence


full scientific name: Planococcus bengal Chowdhury et al.

genus: Planococcus

order: Not assigned to order

species: Planococcus bengal

description: Planococcus sp. KRPC10y 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)

species: Pseudomonas aeruginosa

synonym: Pseudomonas paraeruginosa

synonym: Bacterium aeruginosum

description: Pseudomonas aeruginosa gene for 16S rRNA, partial sequence, strain: Hugh1065

description: Pseudomonas aeruginosa JCM 13956 gene for 16S rRNA, partial sequence


description: domain/bacteria

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900

description: Pseudomonas aeruginosa gene for 16S rRNA, partial sequence, strain: Hugh1066

description: Pseudomonas aeruginosa JCM 13957 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa gene for 16S rRNA, partial sequence, strain: Hugh1067

description: Pseudomonas aeruginosa JCM 13958 gene for 16S rRNA, partial sequence


description: domain/bacteria

full scientific name: Pseudomonas alcaliphila Yumoto et al. 2001

species: Pseudomonas alcaliphila

synonym: Ectopseudomonas alcaliphila

description: Pseudomonas sp. Hugh648 gene for 16S rRNA, partial sequence, strain: Hugh648

description: Pseudomonas alcaliphila JCM 13959 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Pseudomonas sp. Hugh649 gene for 16S rRNA, partial sequence, strain: Hugh649

description: Pseudomonas alcaliphila JCM 13960 gene for 16S rRNA, partial sequence


description: domain/bacteria

full scientific name: Pseudomonas monteilii Elomari et al. 1997

species: Pseudomonas monteilii

description: Pseudomonas sp. Hugh2095 gene for 16S rRNA, partial sequence, strain: Hugh2095

description: Pseudomonas monteilii JCM 13961 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Pseudomonas sp. Hugh2769 gene for 16S rRNA, partial sequence, strain: Hugh2769

description: Pseudomonas monteilii JCM 13962 gene for 16S rRNA, partial sequence


description: domain/bacteria

full scientific name: Pseudomonas oleovorans Lee and Chandler 1941 (Approved Lists 1980)

species: Pseudomonas oleovorans

synonym: Ectopseudomonas pseudoalcaligenes

synonym: Pseudomonas pseudoalcaligenes

synonym: Ectopseudomonas oleovorans

description: Pseudomonas sp. Hugh212 gene for 16S rRNA, partial sequence, strain: Hugh212

description: Pseudomonas oleovorans JCM 13973 gene for 16S rRNA, partial sequence


description: domain/bacteria

full scientific name: Pseudomonas oleovorans Lee and Chandler 1941

description: Pseudomonas oleovorans JCM 13974 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Pseudomonas sp. Hugh2698 gene for 16S rRNA, partial sequence, strain: Hugh2698

description: Pseudomonas oleovorans JCM 13975 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Pseudomonas sp. Hugh2699 gene for 16S rRNA, partial sequence, strain: Hugh2699

description: Pseudomonas oleovorans JCM 13976 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Pseudomonas sp. Hugh2701 gene for 16S rRNA, partial sequence, strain: Hugh2701

description: Pseudomonas oleovorans JCM 13978 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Pseudomonas sp. Hugh2702 gene for 16S rRNA, partial sequence, strain: Hugh2702

description: Pseudomonas oleovorans JCM 13979 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Pseudomonas sp. Hugh2704 gene for 16S rRNA, partial sequence, strain: Hugh2704

description: Pseudomonas oleovorans JCM 13980 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Pseudomonas sp. Hugh2707 gene for 16S rRNA, partial sequence, strain: Hugh2707

description: Pseudomonas oleovorans JCM 13981 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Pseudomonas sp. Hugh2710 gene for 16S rRNA, partial sequence, strain: Hugh2710

description: Pseudomonas oleovorans JCM 13983 gene for 16S rRNA, partial sequence


description: domain/bacteria

full scientific name: Pseudomonas veronii Elomari et al. 1996

species: Pseudomonas veronii

description: Pseudomonas sp. Hugh2090 gene for 16S rRNA, partial sequence, strain: Hugh2090

description: Pseudomonas veronii JCM 13987 gene for 16S rRNA, partial sequence


description: domain/bacteria

full scientific name: Shewanella algae corrig. Simidu et al. 1990

genus: Shewanella

species: Shewanella algae

synonym: Shewanella upenei

synonym: Shewanella alga

synonym: Shewanella haliotis

full scientific name: Shewanella algae Simidu et al. 1990

description: Shewanella algae gene for 16S rRNA, partial sequence, strain: Hugh2630

description: Shewanella algae JCM 13988 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Shewanella algae gene for 16S rRNA, partial sequence, strain: Hugh2687

description: Shewanella algae JCM 13989 gene for 16S rRNA, partial sequence


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Marinitalea sucinacia Kim et al. 2011

genus: Marinitalea

species: Marinitalea sucinacia

full scientific name: Marinitalea sucinacia Kim et al.

description: Marinitalea sucinacia strain JC2131 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Sterolibacteriaceae

full scientific name: <I>Methyloversatilis</I> Kalyuzhnaya et al. 2006

genus: Methyloversatilis

order: Spirillales

species: Methyloversatilis sp.

full scientific name: <I>Methyloversatilis</I> sp.

order: Nitrosomonadales

description: Ultramicrobacter hongkongensis strain 5a1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Oscillospiraceae

full scientific name: Saccharofermentans acetigenes Chen et al. 2010

genus: Saccharofermentans

order: Eubacteriales

species: Saccharofermentans acetigenes

description: Saccharofermentans acetigenes gene for 16S ribosomal RNA, partial sequence

description: Clostridium sp. strain P6 16S ribosomal RNA gene, complete sequence


class: Cytophagia

description: domain/bacteria

family: Cyclobacteriaceae

full scientific name: Cyclobacterium lianum Ying et al. 2006

genus: Cyclobacterium

order: Cytophagales

species: Cyclobacterium lianum

description: Cyclobacterium lianum strain HY9 16S ribosomal RNA gene, partial sequence

description: IMG-taxon 2617270779 annotated assembly for Cyclobacterium lianum CGMCC 1.6102


description: domain/bacteria

family: Paracoccaceae

full scientific name: Paracoccus sulfuroxidans Liu et al. 2006

genus: Paracoccus

order: Rhodobacterales

species: Paracoccus sulfuroxidans

family: Rhodobacteraceae

description: Paracoccus sulfuroxidans strain LW36 16S ribosomal RNA gene, partial sequence

description: ASM783033v1 assembly for Paracoccus sulfuroxidans CGMCC 1.5364


description: domain/bacteria

full scientific name: Nonlabens antarcticus Kwon et al. 2014

genus: Nonlabens

species: Nonlabens antarcticus

description: Nonlabens antarcticus strain AKS622 16S ribosomal RNA gene, partial sequence

description: ASM1535675v1 assembly for Nonlabens antarcticus JCM 14068


description: domain/bacteria

family: Vibrionaceae

full scientific name: <I>Photobacterium</I> Beijerinck 1889 (Approved Lists 1980)

genus: Photobacterium

order: Vibrionales

species: Photobacterium sp.

full scientific name: <I>Photobacterium</I> sp.

description: Photobacterium sp. JCS285 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Syntrophomonadaceae

full scientific name: Syntrophomonas wolfei subsp. methylbutyratica Wu et al. 2007

genus: Syntrophomonas

order: Syntrophomonadales

description: Syntrophomonas wolfei subsp. methybutyica strain 4J5 16S ribosomal RNA gene, partial sequence

description: ASM157062v1 assembly for Syntrophomonas wolfei subsp. methylbutyratica JCM14075


class: Actinomycetes

description: domain/bacteria

full scientific name: Streptomyces lohii Fortman 2006

genus: Streptomyces

species: Streptomyces lohii

full scientific name: Streptomyces lohii

description: Streptomyces lohii strain CIT0036 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)

genus: Pseudomonas

description: Pseudomonas aeruginosa gene for 16S rRNA, partial sequence, strain: NBRC 3919

description: Pseudomonas aeruginosa JCM 14167 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900

description: Pseudomonas aeruginosa JCM 14168 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 14169 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 14170 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 14173 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 14175 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 14177 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 14178 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 14179 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 14180 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 14181 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 14182 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 14183 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 14184 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 14186 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 14187 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 14188 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

family: Shewanellaceae

full scientific name: <I>Shewanella</I> MacDonell and Colwell 1986

order: Alteromonadales

species: Shewanella sp.

full scientific name: <I>Shewanella</I> sp.

description: 'Shewanella arctica' Qoura et al. 2014 16S rRNA gene, type strain 40-3T


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 14235 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 14236 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Pseudomonas aeruginosa JCM 14237 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

full scientific name: Pseudomonas indoloxydans Manickam et al. 2008

species: Pseudomonas indoloxydans

description: Pseudomonas indoloxydans strain IPL-1 16S ribosomal RNA gene, partial sequence

description: ASM305260v1 assembly for Ectopseudomonas oleovorans JCM 14246


description: domain/bacteria

family: Yersiniaceae

full scientific name: Serratia rubidaea (Stapp 1940) Ewing et al. 1973 (Approved Lists 1980)

genus: Serratia

order: Enterobacterales

species: Serratia rubidaea

synonym: Serratia marinorubra

synonym: Bacterium rubidaeum

description: Serratia rubidaea JCM 14263 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

family: Thalassospiraceae

full scientific name: <I>Thalassospira</I> López-López et al. 2002

genus: Thalassospira

order: Rhodospirillales

species: Thalassospira sp.

full scientific name: <I>Thalassospira</I> sp.

description: Thalassospira sp. TN1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Pseudomonas syringae van Hall 1902 (Approved Lists 1980)

species: Pseudomonas syringae

full scientific name: Pseudomonas syringae van Hall et al. 1902

description: Pseudomonas syringae JCM 14314 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Pseudomonas syringae JCM 14317 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

full scientific name: Pseudomonas fluorescens Migula 1895 (Approved Lists 1980)

species: Pseudomonas fluorescens

full scientific name: Pseudomonas fluorescens Migula 1895

description: Pseudomonas fluorescens gene for 16S rRNA, partial sequence, strain: NBRC 15840

description: Pseudomonas fluorescens strain LMG 14675 16S ribosomal RNA gene, partial sequence

description: Pseudomonas fluorescens strain ATCC 14150 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

full scientific name: Pseudomonas putida (Trevisan 1889) Migula 1895 (Approved Lists 1980)

species: Pseudomonas putida

synonym: Arthrobacter siderocapsulatus

synonym: Bacillus putidus

description: ASM593060v1 assembly for Pseudomonas putida NRRL B-251

description: PDT001638953.1 assembly for Pseudomonas putida JCM 14351


description: domain/archaea

family: Thermoproteaceae

full scientific name: <I>Thermoproteus</I> Zillig and Stetter 1982

genus: Thermoproteus

order: Thermoproteales

species: Thermoproteus sp.

full scientific name: <I>Thermoproteus</I> sp.


description: domain/archaea

description: Thermoproteus sp. IC-033 gene for 16S rRNA, partial sequence


description: domain/archaea

description: Thermoproteus sp. IC-061 gene for 16S rRNA, partial sequence


description: domain/archaea

description: Thermoproteus sp. IC-062 genes for 16S rRNA, putative homing endonuclease, partial sequence and complete cds


description: domain/archaea

full scientific name: Vulcanisaeta distributa Itoh et al. 2002

genus: Vulcanisaeta

species: Vulcanisaeta distributa

description: Vulcanisaeta distributa gene for 16S rRNA, partial sequence, strain:IC-019


description: domain/archaea

description: Vulcanisaeta distributa gene for 16S rRNA, partial sequence, strain:IC-030


description: domain/archaea

description: Vulcanisaeta distributa gene for 16S rRNA, partial sequence, strain:IC-032


description: domain/archaea

description: Vulcanisaeta distributa gene for 16S rRNA, partial sequence, strain:IC-051


description: domain/archaea

description: Vulcanisaeta distributa gene for 16S rRNA, partial sequence, strain:IC-052


description: domain/archaea

description: Vulcanisaeta distributa gene for 16S rRNA, partial sequence, strain:IC-058


description: domain/archaea

description: Vulcanisaeta distributa gene for 16S rRNA, partial sequence, strain:IC-136


description: domain/archaea

description: Vulcanisaeta distributa gene for 16S rRNA, partial sequence, strain:IC-140


description: domain/archaea

full scientific name: Vulcanisaeta souniana Itoh et al. 2002

species: Vulcanisaeta souniana

description: Vulcanisaeta souniana gene for 16S rRNA, partial sequence, strain:IC-060


description: domain/archaea

full scientific name: <I>Vulcanisaeta</I> Itoh et al. 2002

species: Vulcanisaeta sp.

full scientific name: <I>Vulcanisaeta</I> sp.

description: ASM131624v1 assembly for Vulcanisaeta sp. JCM 14467


description: domain/bacteria

family: Roseobacteraceae

full scientific name: <I>Tateyamaria</I> Kurahashi and Yokota 2008

genus: Tateyamaria

species: Tateyamaria sp.

full scientific name: <I>Tateyamaria</I> sp.

description: Roseobacter sp. SPO804 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: <I>Vibrio</I> Pacini 1854 (Approved Lists 1980)

genus: Vibrio

species: Vibrio sp.

synonym: Allomonas

synonym: Beneckea

synonym: Lucibacterium

full scientific name: <I>Vibrio</I> sp.

description: Vibrio sp. TJD753 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Kitasatospora saccharophila Li et al. 2009

genus: Kitasatospora

order: Kitasatosporales

species: Kitasatospora saccharophila

class: Actinobacteria

order: Streptomycetales

description: Kitasatospora saccharophila gene for 16S rRNA, partial sequence

description: ASM3952992v1 assembly for Kitasatospora saccharophila JCM 14559

description: ASM4267494v1 assembly for Kitasatospora saccharophila JCM 14559


description: domain/bacteria

full scientific name: Kitasatospora kazusensis corrig. Li et al. 2009

species: Kitasatospora kazusensis

synonym: Kitasatospora kazusanensis

full scientific name: Kitasatospora kazusensis Li et al. 2009

strain designation: SK 60

description: Kitasatospora kazusensis gene for 16S rRNA, partial sequence

description: ASM3952994v1 assembly for Kitasatospora kazusensis JCM 14560


description: domain/archaea

family: Sulfolobaceae

full scientific name: <I>Sulfurisphaera</I> Kurosawa et al. 1998

genus: Sulfurisphaera

order: Sulfolobales

species: Sulfurisphaera sp.

full scientific name: <I>Sulfurisphaera</I> sp.


description: domain/bacteria

family: Comamonadaceae

full scientific name: <I>Polaromonas</I> Irgens et al. 1996

genus: Polaromonas

order: Burkholderiales

species: Polaromonas sp.

full scientific name: <I>Polaromonas</I> sp.

description: Polaromonas rhizosphaerae strain UMS-142 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Bartonellaceae

full scientific name: Bartonella tamiae Kosoy et al. 2024

genus: Bartonella

order: Hyphomicrobiales

species: Bartonella tamiae

synonym: Attibartonella tamiae

full scientific name: Bartonella tamiae Kosoy et al.

description: Bartonella tamiae strain Th239 16S ribosomal RNA gene, partial sequence

description: Bartonella tamiae strain Th239 16S-23S ribosomal RNA intergenic spacer, partial sequence

description: Bart_tami_Th239_V1 assembly for Bartonella tamiae Th239


description: domain/bacteria

family: Microbacteriaceae

full scientific name: Curtobacterium ammoniigenes Aizawa et al. 2007

genus: Curtobacterium

order: Micrococcales

species: Curtobacterium ammoniigenes

description: Curtobacterium ammoniigenes gene for 16S rRNA, partial sequence, strain: NBRC 101790


description: domain/bacteria

description: Curtobacterium ammoniigenes gene for 16S rRNA, partial sequence, strain: NBRC 101788


description: domain/bacteria

description: Curtobacterium ammoniigenes gene for 16S rRNA, partial sequence, strain: NBRC 101789


description: domain/bacteria

family: Sterolibacteriaceae

full scientific name: Georgfuchsia toluolica Weelink et al. 2011

genus: Georgfuchsia

order: Spirillales

species: Georgfuchsia toluolica

description: Georgfuchsia toluolica strain G5G6 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Acetobacteraceae

full scientific name: Falsiroseomonas tokyonensis (Furuhata et al. 2014) Rai et al. 2022

genus: Falsiroseomonas

species: Falsiroseomonas tokyonensis

synonym: Roseomonas tokyonensis

full scientific name: Roseomonas tokyonensis Furuhata et al. 2014

genus: Roseomonas

species: Roseomonas tokyonensis

description: Roseomonas tokyonensis gene for 16S rRNA, partial sequence


description: domain/bacteria

family: Bacteroidaceae

full scientific name: Bacteroides propionicifaciens Ueki et al. 2008

genus: Bacteroides

order: Bacteroidales

species: Bacteroides propionicifaciens

description: Bacteroides propionicifaciens gene for 16S ribosomal RNA, partial sequence, strain: JCM 14650


class: Halobacteria

description: domain/archaea

family: Natrialbaceae

full scientific name: Natrinema gari Tapingkae et al. 2008

genus: Natrinema

order: Halobacteriales

species: Natrinema gari

order: Natrialbales

description: Natrinema gari gene for 16S ribosomal RNA, partial sequence, strain: HDS3-1


family: Nocardiaceae

full scientific name: Nocardia roseoalba Jiang et al.

genus: Nocardia

order: Not assigned to order

species: Nocardia roseoalba

description: Nocardia roseoalba partial 16S rRNA gene, type strain YIM 36723


description: domain/bacteria

family: Dietziaceae

full scientific name: Dietzia natronolimnaea corrig. Duckworth et al. 1999

genus: Dietzia

order: Mycobacteriales

species: Dietzia natronolimnaea

synonym: Dietzia natronolimnaios

full scientific name: Dietzia natronolimnaea Duckworth et al. 1999


description: domain/bacteria

family: Methylobacteriaceae

full scientific name: <I>Methylobacterium</I> Patt et al. 1976 (Approved Lists 1980)

genus: Methylobacterium

species: Methylobacterium sp.

full scientific name: <I>Methylobacterium</I> sp.

description: Methylobacterium sp. B1 gene for 16S ribosomal RNA, partial sequence

description: ASM33325v1 assembly for Methylobacterium sp. B1


description: domain/bacteria

description: Methylobacterium sp. B34 gene for 16S ribosomal RNA, partial sequence

description: ASM33347v1 assembly for Methylobacterium sp. B34


description: domain/bacteria

family: Nitrobacteraceae

full scientific name: <I>Rhodopseudomonas</I> Czurda and Maresch 1937 (Approved Lists 1980)

genus: Rhodopseudomonas

species: Rhodopseudomonas sp.

full scientific name: <I>Rhodopseudomonas</I> sp.

description: Rhodopseudomonas sp. B29 gene for 16S ribosomal RNA

description: ASM33345v1 assembly for Rhodopseudomonas sp. B29


family: Not assigned to family

full scientific name: Unidentified bacterium

genus: Not assigned to family

species: Unidentified bacterium

description: Cytophagales str. B6 gene for 16S rRNA, partial sequence

description: ASM33329v1 assembly for Cytophagales bacterium B6


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: <I>Flavobacterium</I> Bergey et al. 1923 (Approved Lists 1980)

genus: Flavobacterium

order: Flavobacteriales

species: Flavobacterium sp.

full scientific name: <I>Flavobacterium</I> sp.

description: Flavobacterium sp. B17 gene for 16S ribosomal RNA

description: ASM33335v1 assembly for Flavobacterium sp. B17


description: domain/bacteria

family: Azospirillaceae

full scientific name: <I>Azospirillum</I> Tarrand et al. 1979 (Approved Lists 1980)

genus: Azospirillum

species: Azospirillum sp.

synonym: Conglomeromonas

full scientific name: <I>Azospirillum</I> sp.

description: Azospirillum sp. B506 gene for 16S rRNA, partial sequence

description: ASM33359v1 assembly for Azospirillum sp. B506


description: domain/bacteria

description: Azospirillum sp. B510 gene for 16S rRNA, partial sequence

description: ASM1072v1 assembly for Azospirillum sp. B510


description: domain/bacteria

family: Oxalobacteraceae

full scientific name: Herbaspirillum huttiense (Leifson 1962) Ding and Yokota 2004

genus: Herbaspirillum

species: Herbaspirillum huttiense

synonym: Pseudomonas huttiensis

description: Herbaspirillum sp. B39 gene for 16S ribosomal RNA

description: Herbaspirillum huttiense JCM:14681 gene for 16S rRNA, partial sequence

description: ASM33349v1 assembly for Herbaspirillum sp. B39


description: domain/bacteria

family: Erwiniaceae

full scientific name: Pantoea ananatis corrig. (Serrano 1928) Mergaert et al. 1993

genus: Pantoea

species: Pantoea ananatis

synonym: Pantoea ananas

synonym: Erwinia ananatis

synonym: Erwinia uredovora

synonym: Xanthomonas uredovorus

synonym: Erwinia ananas

full scientific name: Pantoea ananatis (Serrano 1928) Mergaert et al. 1993

description: Pantoea sp. B40 gene for 16S ribosomal RNA

description: Pantoea ananatis JCM:14682 gene for 16S rRNA, partial sequence

description: ASM33351v1 assembly for Pantoea sp. B40


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Kosakonia cowanii (Inoue et al. 2001) Brady et al. 2013

genus: Kosakonia

species: Kosakonia cowanii

synonym: Enterobacter cowanii

description: Klebsiella cf. planticola B43 gene for 16S ribosomal RNA

description: Klebsiella sp. JCM 14683 gene for 16S ribosomal RNA, partial sequence

description: ASM33353v1 assembly for Klebsiella cf. planticola B43


description: domain/bacteria

full scientific name: Herbaspirillum rubrisubalbicans (Christopher and Edgerton 1930) Baldani et al. 1996

species: Herbaspirillum rubrisubalbicans

synonym: Phytomonas rubrisubalbicans

synonym: Pseudomonas rubrisubalbicans

description: Herbaspirillum sp. B65 gene for 16S rRNA, partial sequence

description: ASM33355v1 assembly for Herbaspirillum sp. B65


description: domain/bacteria

description: Herbaspirillum sp. B501 gene for 16S rRNA, partial sequence

description: ASM33357v1 assembly for Herbaspirillum sp. B501


description: domain/bacteria

family: Sphaerotilaceae

full scientific name: <I>Ideonella</I> Malmqvist et al. 1994

genus: Ideonella

species: Ideonella sp.

family: Comamonadaceae

full scientific name: <I>Ideonella</I> sp.

description: Ideonella sp. B508-1 gene for 16S rRNA, partial sequence

description: ASM33361v1 assembly for Ideonella sp. B508-1


description: domain/bacteria

full scientific name: Enterobacter mori Zhu et al. 2011

genus: Enterobacter

species: Enterobacter mori

synonym: Enterobacter tabaci

description: Enterobacter sp. B509 gene for 16S rRNA, partial sequence

description: ASM33363v1 assembly for Enterobacter sp. B509


description: domain/bacteria

family: Microbacteriaceae

full scientific name: <I>Curtobacterium</I> Yamada and Komagata 1972 (Approved Lists 1980)

genus: Curtobacterium

species: Curtobacterium sp.

full scientific name: <I>Curtobacterium</I> sp.

description: Curtobacterium sp. B8 gene for 16S ribosomal RNA

description: ASM33331v1 assembly for Curtobacterium sp. B8


description: domain/bacteria

description: Curtobacterium sp. B18 gene for 16S ribosomal RNA

description: ASM33337v1 assembly for Curtobacterium sp. B18


description: domain/bacteria

full scientific name: <I>Microbacterium</I> Orla-Jensen 1919 (Approved Lists 1980)

genus: Microbacterium

species: Microbacterium sp.

synonym: Aureobacterium

synonym: Paramicrobacterium

full scientific name: <I>Microbacterium</I> sp.

description: Microbacterium sp. B19 gene for 16S ribosomal RNA

description: ASM33339v1 assembly for Microbacterium sp. B19


description: domain/bacteria

description: Microbacterium sp. B24 gene for 16S ribosomal RNA

description: ASM33341v1 assembly for Microbacterium sp. B24


full scientific name: Unidentified actinobacterium

species: Unidentified actinobacterium

description: Corynebacterium-like bacterium B27 gene for 16S ribosomal RNA

description: Microbacteriaceae bacterium JCM 14692 gene for 16S ribosomal RNA, partial sequence

description: ASM33343v1 assembly for Corynebacterium-like bacterium B27


description: domain/bacteria

family: Roseobacteraceae

full scientific name: <I>Salipiger</I> Martínez-Cánovas et al. 2004

genus: Salipiger

order: Rhodobacterales

species: Salipiger sp.

synonym: Citreicella

synonym: Pelagibaca

synonym: Paraphaeobacter

synonym: Thiobacimonas

family: Rhodobacteraceae

full scientific name: <I>Citreicella</I> sp.

genus: Citreicella

species: Citreicella sp.

description: Citreicella sp. 2-2A gene for 16S rRNA, partial sequence


description: domain/bacteria

family: Micromonosporaceae

full scientific name: <I>Pseudosporangium</I> Ara et al. 2008

genus: Pseudosporangium

order: Micromonosporales

species: Pseudosporangium sp.

full scientific name: <I>Pseudosporangium</I> sp.


class: Coriobacteriia

description: domain/bacteria

family: Atopobiaceae

full scientific name: Lancefieldella parvula (Weinberg et al. 1937) Nouioui et al. 2018

genus: Lancefieldella

order: Coriobacteriales

species: Lancefieldella parvula

synonym: Atopobium parvulum

synonym: Peptostreptococcus parvulus

synonym: Streptococcus parvulus

description: Atopobium parvulum gene for 16S ribosomal RNA, partial sequence, strain: JCM 1472


description: domain/bacteria

family: Sutterellaceae

full scientific name: Sutterella parvirubra Sakon et al. 2008

genus: Sutterella

species: Sutterella parvirubra


description: domain/bacteria

full scientific name: <I>Azospirillum</I> Tarrand et al. 1979 (Approved Lists 1980)

order: Rhodospirillales

synonym: Conglomeromonas

full scientific name: <I>Azospirillum</I> sp.

description: Azospirillum sp. B4 gene for 16S ribosomal RNA

description: ASM33327v1 assembly for Azospirillum sp. B4


description: domain/bacteria

family: Gallionellaceae

full scientific name: Sideroxydans lithotrophicus Emerson et al. 2007

genus: Sideroxydans

species: Sideroxydans lithotrophicus

full scientific name: Sideroxydans lithotrophicus

order: Nitrosomonadales

description: ASM2570v1 assembly for Sideroxydans lithotrophicus ES-1


description: domain/bacteria

full scientific name: Sideroxydans paludicola Weiss et al. 2007

species: Sideroxydans paludicola

full scientific name: Sideroxydans paludicola

description: Sideroxydans paludicola strain BrT 16S ribosomal RNA gene, complete sequence


description: domain/bacteria

family: Alcaligenaceae

full scientific name: Allopusillimonas ginsengisoli (Srinivasan et al. 2010) Babich et al. 2023

genus: Allopusillimonas

species: Allopusillimonas ginsengisoli

synonym: Pusillimonas ginsengisoli

full scientific name: Pusillimonas ginsengisoli Srinivasan et al. 2010

genus: Pusillimonas

species: Pusillimonas ginsengisoli

description: Pusillimonas ginsengisoli strain DCY28 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Sphingomonadaceae

full scientific name: <I>Sphingomonas</I> Yabuuchi et al. 1990

genus: Sphingomonas

order: Sphingomonadales

species: Sphingomonas sp.

synonym: Alterirhizorhabdus

synonym: Paraquisediminimonas

synonym: Novistakelama

synonym: Parastakelama

synonym: Alteristakelama

synonym: Pseudostakelama

synonym: Alterisphingomonas

synonym: Solisphingomonas

synonym: Parayabuuchia

synonym: Humisphingomonas

synonym: Pseudosphingomonas

synonym: Neorhizorhabdus

synonym: Parasphingomonas

synonym: Flavisphingomonas

synonym: Edaphosphingomonas

synonym: Pararhizorhabdus

synonym: Alteriyabuuchia

synonym: Alterisphingopyxis

full scientific name: <I>Sphingomonas</I> sp.

description: Sphingomonas sp. CW19 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

synonym: Alterirhizorhabdus

synonym: Paraquisediminimonas

description: Sphingomonas kwangyangensis strain CW37 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Intrasporangiaceae

full scientific name: <I>Intrasporangium</I> Kalakoutskii et al. 1967 (Approved Lists 1980)

genus: Intrasporangium

species: Intrasporangium sp.

synonym: Humihabitans

synonym: Monashia

full scientific name: <I>Intrasporangium</I> sp.


class: Bacilli

description: domain/bacteria

family: Bacillaceae

full scientific name: <I>Bacillus</I> Cohn 1872 (Approved Lists 1980)

genus: Bacillus

order: Caryophanales

species: Bacillus sp.

synonym: Quasibacillus

synonym: Weizmannia

synonym: Maribacillus

synonym: Niallia

full scientific name: <I>Bacillus</I> sp.

description: Bacillus megaterium isolate MC1 16S ribosomal RNA gene, partial sequence


culture collection no.: JCM 1484, IFM AU-38

description: domain/bacteria

family: Micrococcaceae

full scientific name: <I>Paeniglutamicibacter</I> Busse 2016

genus: Paeniglutamicibacter

species: Paeniglutamicibacter sp.

full scientific name: <I>Paeniglutamicibacter</I> sp.


description: domain/bacteria

family: Lysobacteraceae

full scientific name: <I>Stenotrophomonas</I> Palleroni and Bradbury 1993

genus: Stenotrophomonas

order: Lysobacterales

species: Stenotrophomonas sp.

synonym: Allostenotrophomonas

synonym: Pedostenotrophomonas

full scientific name: <I>Stenotrophomonas</I> sp.

description: Stenotrophomonas sp. DCY33 16S ribosomal RNA gene, partial sequence


culture collection no.: JCM 1485, IFM AU-28

description: domain/bacteria


culture collection no.: JCM 1486, IFM AU-44

description: domain/bacteria

full scientific name: <I>Glutamicibacter</I> Busse 2016

genus: Glutamicibacter

species: Glutamicibacter sp.

full scientific name: <I>Glutamicibacter</I> sp.


description: domain/bacteria

full scientific name: Glutamicibacter nicotianae (Giovannozzi-Sermanni 1959) Busse 2016

species: Glutamicibacter nicotianae

synonym: Glutamicibacter mysorens

synonym: Corynebacterium liquefaciens

synonym: Brevibacterium liquefaciens

synonym: Arthrobacter mysorens

synonym: Arthrobacter nicotianae


description: domain/bacteria


family: Not assigned to family

full scientific name: Thiocapsa subramanianensis

genus: Thiocapsa

species: Thiocapsa subramanianensis

description: Thiocapsa subramanianii partial 16S rRNA gene, type strain JA146T


description: domain/bacteria

full scientific name: Microbacterium deminutum Kageyama et al. 2006

species: Microbacterium deminutum

description: Microbacterium deminutum gene for 16S rRNA, partial sequence

description: ASM3953020v1 assembly for Microbacterium deminutum JCM 14901


description: domain/bacteria

full scientific name: Microbacterium terricola corrig. Kageyama et al. 2007

species: Microbacterium terricola

synonym: Microbacterium terricolae

full scientific name: Microbacterium terricola Kageyama et al. 2007

description: Microbacterium terricola gene for 16S rRNA, partial sequence

description: ASM2575839v1 assembly for Microbacterium terricola JCM 14903

description: ASM3953024v1 assembly for Microbacterium terricola JCM 14903


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lactobacillus amylovorus Nakamura 1981

genus: Lactobacillus

order: Lactobacillales

species: Lactobacillus amylovorus

synonym: Lactobacillus sobrius

description: Lactobacillus amylovorus gene for 16S ribosomal RNA, partial sequence, strain: JCM 14931


description: domain/bacteria

family: Moraxellaceae

full scientific name: <I>Acinetobacter</I> Brisou and Prévot 1954 (Approved Lists 1980)

genus: Acinetobacter

order: Pseudomonadales

species: Acinetobacter sp.

full scientific name: <I>Acinetobacter</I> sp.

description: Acinetobacter sp. J42 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Nitrobacteraceae

full scientific name: Bradyrhizobium oligotrophicum (Ohta and Hattori 1985) Ramírez-Bahena et al. 2013

genus: Bradyrhizobium

order: Hyphomicrobiales

species: Bradyrhizobium oligotrophicum

synonym: Agromonas oligotrophica

full scientific name: Bradyrhizobium oligotrophicum (Ohta and Hattori 1985) Ram¡rez-Bahena et al. 2013

description: Bradyrhizobium oligotrophicum gene for 16S rRNA, partial sequence, strain: JCM 1495


class: Elusimicrobia

description: domain/bacteria

family: Elusimicrobiaceae

full scientific name: Elusimicrobium minutum Geissinger et al. 2010

genus: Elusimicrobium

keyword: phylum/elusimicrobiota

order: Elusimicrobiales

phylum: Elusimicrobiota

species: Elusimicrobium minutum

phylum: Elusimicrobia

description: Elusimicrobium minutum partial 16S rRNA gene, type strain Pei191T

description: ASM2014v1 assembly for Elusimicrobium minutum Pei191


description: domain/bacteria

description: Bradyrhizobium oligotrophicum gene for 16S rRNA, partial sequence, strain: JCM 1496


description: domain/bacteria

family: Aeromonadaceae

full scientific name: <I>Zobellella</I> Lin and Shieh 2006

genus: Zobellella

order: Aeromonadales

species: Zobellella sp.

full scientific name: <I>Zobellella</I> sp.

description: Zobellella sp. J51 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Bradyrhizobium oligotrophicum gene for 16S rRNA, partial sequence, strain: JCM 1497


description: domain/bacteria

description: Bradyrhizobium oligotrophicum gene for 16S rRNA, partial sequence, strain: JCM 1498


class: Methanopyri

description: domain/archaea

family: Methanopyraceae

full scientific name: Methanopyrus kandleri Kurr et al. 1992

genus: Methanopyrus

order: Methanopyrales

species: Methanopyrus kandleri

description: Methanopyrus kandleri gene for 16S rRNA, partial sequence, strain: 116


class: Betaproteobacteria

description: domain/bacteria

family: Burkholderiaceae

full scientific name: <I>Burkholderia</I> Yabuuchi et al. 1993

genus: Burkholderia

order: Burkholderiales

species: Burkholderia sp.

full scientific name: <I>Burkholderia</I> sp.

description: Burkholderia sp. USM 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Chromobacteriaceae

full scientific name: <I>Chromobacterium</I> Bergonzini 1880 (Approved Lists 1980)

genus: Chromobacterium

order: Neisseriales

species: Chromobacterium sp.

full scientific name: <I>Chromobacterium</I> sp.

description: Chromobacterium sp. USM2 16S ribosomal RNA gene, partial sequence


class: Gammaproteobacteria

description: domain/bacteria

family: Erwiniaceae

full scientific name: Pantoea ananatis corrig. (Serrano 1928) Mergaert et al. 1993

genus: Pantoea

order: Enterobacterales

species: Pantoea ananatis

synonym: Pantoea ananas

synonym: Erwinia ananatis

synonym: Erwinia uredovora

synonym: Xanthomonas uredovorus

synonym: Erwinia ananas

full scientific name: Pantoea ananatis (Serrano 1928) Mergaert et al. 1993

description: Pantoea ananatis gene for 16S rRNA, partial sequence, strain: SK-1


description: domain/bacteria

family: Yersiniaceae

full scientific name: Serratia marcescens Bizio 1823 (Approved Lists 1980)

genus: Serratia

species: Serratia marcescens

synonym: Serratia marcescens subsp. sakuensis

full scientific name: Serratia marcescens Bizio 1823

description: Serratia marcescens gene for 16S rRNA, partial sequene, strain: AS-1

description: ASM396705v1 assembly for Serratia marcescens AS-1


description: domain/archaea

family: Haloferacaceae

full scientific name: <I>Haloquadratum</I> Burns et al. 2007

genus: Haloquadratum

order: Halobacteriales

species: Haloquadratum sp.

full scientific name: <I>Haloquadratum</I> sp.

order: Haloferacales

description: Haloarchaeon BJCX4_extB9.1 16S ribosomal RNA gene, partial sequence


class: Deinococci

description: domain/bacteria

family: Deinococcaceae

full scientific name: Deinococcus guangxiensis Sun et al. 2025

genus: Deinococcus

keyword: phylum/deinococcota

order: Deinococcales

phylum: Deinococcota

species: Deinococcus guangxiensis

full scientific name: Deinococcus guangxiensis Sun et al.

phylum: Deinococcus-Thermus

description: Deinococcus sp. WGR700 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Brevibacillus panacihumi Kim et al. 2009

genus: Brevibacillus

species: Brevibacillus panacihumi

description: Brevibacillus panacihumi strain C17 16S ribosomal RNA gene, partial sequence


class: Methanomicrobia

description: domain/archaea

family: Methanomicrobiaceae

full scientific name: Methanofollis ethanolicus Imachi et al. 2009

genus: Methanofollis

order: Methanomicrobiales

phylum: Methanobacteriota

species: Methanofollis ethanolicus

description: Methanofollis ethanolicus gene for 16S rRNA, partial sequence

description: ASM157138v1 assembly for Methanofollis ethanolicus HASU


class: Alphaproteobacteria

description: domain/bacteria

family: Sphingomonadaceae

full scientific name: Sphingopyxis macrogoltabida (Takeuchi et al. 1993) Takeuchi et al. 2001

genus: Sphingopyxis

species: Sphingopyxis macrogoltabida

synonym: Sphingomonas macrogoltabida

synonym: Sphingomonas macrogoltabidus

synonym: Sphingomonas macrogolitabida

description: Sphingopyxis macrogoltabida gene for 16S ribosomal RNA, partial sequence, strain: IFO 15867


description: domain/bacteria

description: Sphingopyxis macrogoltabida gene for 16S ribosomal RNA, partial sequence, strain: IFO 15866


description: domain/bacteria

family: Chromatiaceae

full scientific name: Thiocystis cadagnonensis Peduzzi et al. 2011

genus: Thiocystis

order: Chromatiales

species: Thiocystis cadagnonensis

description: Thiocystis cadagnonensis 448.10 partial 16S rRNA gene, type strain Cad448T


description: domain/bacteria

full scientific name: Thiocystis chemoclinalis Peduzzi et al. 2011

species: Thiocystis chemoclinalis

description: Thiocystis chemoclinalis H1.1 partial 16S rRNA gene, type strain CadH11T


class: Bacteroidia

description: domain/bacteria

family: Prevotellaceae

full scientific name: Prevotella falsenii Sakamoto et al. 2009

genus: Prevotella

order: Bacteroidales

species: Prevotella falsenii

description: Prevotella falsenii gene for 16S ribosomal RNA, partial sequence, strain: 04013 (= JCM 15121)


description: domain/bacteria

description: Prevotella falsenii gene for 16S ribosomal RNA, partial sequence, strain: 04021 (= JCM 15122)


description: domain/bacteria

description: Prevotella falsenii gene for 16S ribosomal RNA, partial sequence, strain: 04043 (= JCM 15123)


description: domain/bacteria

description: Prevotella falsenii gene for 16S ribosomal RNA, partial sequence, strain: 0406 (= JCM 15125)


description: domain/bacteria

description: Prevotella falsenii gene for 16S ribosomal RNA, partial sequence, strain: 04113 (= JCM 15126)


description: domain/bacteria

description: Prevotella falsenii gene for 16S ribosomal RNA, partial sequence, strain: 04111 (= JCM 15127)


description: domain/bacteria

description: Prevotella falsenii gene for 16S ribosomal RNA, partial sequence, strain: 04161(= JCM 15128)


description: domain/bacteria

family: Alteromonadaceae

full scientific name: <I>Marinobacter</I> Gauthier et al. 1992

genus: Marinobacter

order: Alteromonadales

species: Marinobacter sp.

full scientific name: <I>Marinobacter</I> sp.

description: Marinobacter sp. BR-13 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Thermaceae

full scientific name: Meiothermus cateniformans Zhang et al. 2010

genus: Meiothermus

order: Thermales

species: Meiothermus cateniformans

description: Meiothermus cateniformans strain L462 16S ribosomal RNA (rrnA) gene, partial sequence


description: domain/bacteria

full scientific name: Thermus arciformis Zhang et al. 2010

genus: Thermus

species: Thermus arciformis

description: Thermus arciformis strain TH91 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Marinobacter mobilis Huo et al. 2008

species: Marinobacter mobilis

description: Marinobacter mobilis strain CN71 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Legionellaceae

full scientific name: Legionella nagasakiensis Yang et al. 2012

genus: Legionella

order: Legionellales

species: Legionella nagasakiensis

description: Legionella nagasakiensis strain CDC-5427-OH-H 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Halomonadaceae

full scientific name: Chromohalobacter israelensis (Huval et al. 1996) Arahal et al. 2001

genus: Chromohalobacter

order: Oceanospirillales

species: Chromohalobacter israelensis

synonym: Halomonas israelensis

synonym: Chromohalobacter salexigens

full scientific name: Chromohalobacter salexigens Arahal et al. 2001

species: Chromohalobacter salexigens

description: Chromohalobacter salexigens strain R5-7 16S ribosomal RNA gene, partial sequence


class: Thermotogae

description: domain/bacteria

family: Fervidobacteriaceae

full scientific name: <I>Thermosipho</I> Huber et al. 1989

genus: Thermosipho

keyword: phylum/thermotogota

order: Thermotogales

phylum: Thermotogota

species: Thermosipho sp.

full scientific name: <I>Thermosipho</I> sp.

phylum: Thermotogae


description: domain/bacteria

family: Bacillaceae

full scientific name: Virgibacillus siamensis Tanasupawat et al. 2011

genus: Virgibacillus

order: Caryophanales

phylum: Bacillota

species: Virgibacillus siamensis

phylum: Firmicutes

description: Virgibacillus siamensis gene for 16S rRNA, partial sequence, strain: MS3-4

description: ASM4268498v1 assembly for Virgibacillus siamensis TISTR 1957

description: ASM3952260v1 assembly for Virgibacillus siamensis JCM 15395


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium avium Chester 1901 (Approved Lists 1980)

genus: Mycobacterium

order: Mycobacteriales

phylum: Actinomycetota

species: Mycobacterium avium

synonym: Mycobacterium bouchedurhonense

full scientific name: Mycobacterium avium Chester 1901

phylum: Actinobacteria

description: Mycobacterium avium gene for 16S ribosomal RNA, partial sequence, strain: JCM 15429


description: domain/bacteria

description: Mycobacterium avium gene for 16S ribosomal RNA, partial sequence, strain: JCM 15430


description: domain/bacteria


description: domain/bacteria

full scientific name: <I>Candidatus</I> Thiodictyon syntrophicum Peduzzi et al. 2012

genus: Thiodictyon

phylum: Pseudomonadota

species: Thiodictyon syntrophicum

full scientific name: Thiodictyon syntrophicum Peduzzi et al.

phylum: Proteobacteria

description: Candidatus Thiodictyon syntrophicum str. Cad16 partial 16S rRNA gene, type strain Cad16(T)


description: domain/bacteria

full scientific name: <I>Anoxybacillus</I> Pikuta et al. 2000

genus: Anoxybacillus

species: Anoxybacillus sp.

full scientific name: <I>Anoxybacillus</I> sp.

description: Anoxybacillus sp. CBS-5 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: <I>Thiocapsa</I> Winogradsky 1888 (Approved Lists 1980)

genus: Thiocapsa

species: Thiocapsa sp.

synonym: Amoebobacter

synonym: Rhodothece

full scientific name: <I>Thiocapsa</I> sp.

description: Thiocapsa sp. KS1 gene for 16S ribosomal RNA, partial sequence

description: Thiocapsa sp. KS1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Sphingosinicellaceae

full scientific name: <I>Polymorphobacter</I> Fukuda et al. 2014

genus: Polymorphobacter

order: Sphingomonadales

species: Polymorphobacter sp.

full scientific name: <I>Polymorphobacter</I> sp.

description: Sandarakinorhabdus sp. JC2488 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: <I>Sphingomonas</I> Yabuuchi et al. 1990

genus: Sphingomonas

species: Sphingomonas sp.

synonym: Alterirhizorhabdus

synonym: Paraquisediminimonas

synonym: Novistakelama

synonym: Parastakelama

synonym: Alteristakelama

synonym: Pseudostakelama

synonym: Alterisphingomonas

synonym: Solisphingomonas

synonym: Parayabuuchia

synonym: Humisphingomonas

synonym: Pseudosphingomonas

synonym: Neorhizorhabdus

synonym: Parasphingomonas

synonym: Flavisphingomonas

synonym: Edaphosphingomonas

synonym: Pararhizorhabdus

synonym: Alteriyabuuchia

synonym: Alterisphingopyxis

full scientific name: <I>Sphingomonas</I> sp.

description: Sphingomonas sp. JC2489 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Acetobacteraceae

full scientific name: Commensalibacter intestini Roh et al. 2019

genus: Commensalibacter

order: Rhodospirillales

species: Commensalibacter intestini

description: Commensalibacter intestini strain A911 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Gluconobacter morbifer Roh et al. 2019

genus: Gluconobacter

species: Gluconobacter morbifer

description: Gluconobacter morbifer strain G707 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Lactobacillaceae

full scientific name: <I>Lactobacillus</I> Beijerinck 1901 (Approved Lists 1980)

genus: Lactobacillus

order: Lactobacillales

species: Lactobacillus sp.

full scientific name: <I>Lactobacillus</I> sp.

description: Lactobacillus sp. JCM 1552 gene for 16S rRNA, partial sequence, strain: JCM 1552.


class: Desulfovibrionia

description: domain/bacteria

family: Desulfovibrionaceae

full scientific name: Fundidesulfovibrio butyratiphilus (Suzuki et al. 2010) Galushko and Kuever 2021

genus: Fundidesulfovibrio

keyword: phylum/thermodesulfobacteriota

order: Desulfovibrionales

phylum: Thermodesulfobacteriota

species: Fundidesulfovibrio butyratiphilus

synonym: Desulfovibrio butyratiphilus

class: Deltaproteobacteria

full scientific name: Desulfovibrio butyratiphilus Suzuki et al. 2010

genus: Desulfovibrio

species: Desulfovibrio butyratiphilus


description: domain/bacteria

family: Moraxellaceae

full scientific name: Psychrobacter fulvigenes Romanenko et al. 2009

genus: Psychrobacter

order: Pseudomonadales

species: Psychrobacter fulvigenes

description: Psychrobacter fulvigenes gene for 16S ribosomal RNA, partial sequence, strain: KC65 (=KMM 3967)


description: domain/bacteria

full scientific name: Lactobacillus rhamnosus (Hansen 1968) Collins et al. 1989

species: Lactobacillus rhamnosus

synonym: Lacticaseibacillus rhamnosus

synonym: Lactobacillus casei subsp. rhamnosus

full scientific name: Lacticaseibacillus rhamnosus (Hansen 1968) Zheng et al. 2020

genus: Lacticaseibacillus

species: Lacticaseibacillus rhamnosus

description: Lactobacillus rhamnosus gene for 16S rRNA, partial sequence, strain: JCM 1553.

description: ASM343339v1 assembly for Lacticaseibacillus rhamnosus ATCC 11443


description: domain/bacteria

family: Alcaligenaceae

full scientific name: Bordetella hinzii Vandamme et al. 1995

genus: Bordetella

order: Burkholderiales

species: Bordetella hinzii

description: Bordetella hinzii JCM 15551 gene for 16S ribosomal RNA, partial sequence


description: domain/archaea

family: Haloferacaceae

full scientific name: Haloquadratum walsbyi Burns et al. 2007

genus: Haloquadratum

order: Halobacteriales

species: Haloquadratum walsbyi

order: Haloferacales

phylum: Euryarchaeota


description: domain/bacteria

family: Roseobacteraceae

full scientific name: <I>Amylibacter</I> Teramoto and Nishijima 2014

genus: Amylibacter

order: Rhodobacterales

species: Amylibacter sp.

synonym: Paramylibacter

family: Rhodobacteraceae

full scientific name: <I>Amylibacter</I> sp.

description: Rhodobacteraceae bacterium KS2 gene for 16S ribosomal RNA, partial sequence


class: Thermaerobacteria

description: domain/bacteria

family: Thermaerobacteraceae

full scientific name: <I>Thermaerobacter</I> Takai et al. 1999

genus: Thermaerobacter

order: Thermaerobacterales

species: Thermaerobacter sp.

class: Clostridia

family: Syntrophomonadaceae

full scientific name: <I>Thermaerobacter</I> sp.

order: Eubacteriales

description: Thermaerobacter sp. SS gene for 16S rRNA, partial sequence


description: domain/bacteria

full scientific name: <I>Tateyamaria</I> Kurahashi and Yokota 2008

genus: Tateyamaria

species: Tateyamaria sp.

full scientific name: <I>Tateyamaria</I> sp.

description: Rhodobacteraceae bacterium MEBiC05055 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Erythrobacteraceae

full scientific name: <I>Croceicoccus</I> Xu et al. 2009

genus: Croceicoccus

species: Croceicoccus sp.

full scientific name: <I>Croceicoccus</I> sp.

description: Erythrobacteraceae bacterium MEBiC05008 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: <I>Acinetobacter</I> Brisou and Prévot 1954 (Approved Lists 1980)

genus: Acinetobacter

species: Acinetobacter sp.

full scientific name: <I>Acinetobacter</I> sp.

description: Acinetobacter sp. HY-7 16S ribosomal RNA gene, partial sequence


class: Actinomycetes

description: domain/bacteria

family: Intrasporangiaceae

full scientific name: Phycicoccus jejuensis Lee 2006

genus: Phycicoccus

order: Micrococcales

species: Phycicoccus jejuensis

class: Actinobacteria

description: Phycicoccus jejuensis gene for 16S rRNA, partial sequence

description: Phycicoccus jejuensis strain KSW2-15 16S ribosomal RNA gene, partial sequence

description: ASM72092v1 assembly for Phycicoccus jejuensis NRRL B-24460


description: domain/bacteria

description: Lactobacillus rhamnosus gene for 16S rRNA, partial sequence, strain: JCM 1563.


description: domain/bacteria

family: Halomonadaceae

full scientific name: Halomonas jeotgali Kim et al. 2011

genus: Halomonas

species: Halomonas jeotgali

synonym: Vreelandella jeotgali

description: Halomonas jeotgali strain Hwa 16S ribosomal RNA gene, partial sequence

description: Hwa assembly for Vreelandella jeotgali Hwa


description: domain/bacteria

full scientific name: Thermaerobacter composti Yabe et al. 2010

species: Thermaerobacter composti

description: Thermaerobacter composti gene for 16S ribosomal RNA, partial sequence

description: ASM131196v1 assembly for Thermaerobacter composti JCM 15650


description: domain/bacteria

full scientific name: <I>Achromobacter</I> Yabuuchi and Yano 1981

genus: Achromobacter

species: Achromobacter sp.

synonym: Achromobacter

full scientific name: <I>Achromobacter</I> sp.

description: Achromobacter sp. TG-S244 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Acinetobacter sp. RS230 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Acinetobacter sp. RS206 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Burkholderiaceae

full scientific name: <I>Pandoraea</I> Coenye et al. 2000

genus: Pandoraea

species: Pandoraea sp.

full scientific name: <I>Pandoraea</I> sp.

description: Pandoraea sp. AI-S126 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Pandoraea sp. AI-S256 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Pandoraea sp. AI-S260 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Microbacteriaceae

full scientific name: Leifsonia soli Madhaiyan et al. 2010

genus: Leifsonia

species: Leifsonia soli

description: Leifsonia soli strain TG-S240 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Bacillaceae

full scientific name: <I>Bacillus</I> Cohn 1872 (Approved Lists 1980)

genus: Bacillus

species: Bacillus sp.

synonym: Quasibacillus

synonym: Weizmannia

synonym: Maribacillus

synonym: Niallia

full scientific name: <I>Bacillus</I> sp.

description: Bacillus sp. SJ-10 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Tannerellaceae

full scientific name: Parabacteroides gordonii Sakamoto et al. 2009

genus: Parabacteroides

order: Bacteroidales

phylum: Bacteroidota

species: Parabacteroides gordonii

phylum: Bacteroidetes

description: Parabacteroides gordonii gene for 16S ribosomal RNA, partial sequence, strain: JCM 15725


description: domain/bacteria

description: Parabacteroides gordonii gene for 16S ribosomal RNA, partial sequence, strain: JCM 15726


description: domain/bacteria

full scientific name: Secundilactobacillus paracollinoides (Suzuki et al. 2004) Zheng et al. 2020

genus: Secundilactobacillus

species: Secundilactobacillus paracollinoides

synonym: Lactobacillus paracollinoides

description: Lactobacillus paracollinoides gene for 16S ribosomal RNA, partial sequence, strain: JCM 15728


description: domain/bacteria

description: Lactobacillus paracollinoides gene for 16S ribosomal RNA, partial sequence, strain: JCM 15729


description: domain/bacteria

description: Lactobacillus paracollinoides gene for 16S ribosomal RNA, partial sequence, strain: JCM 15730


description: domain/bacteria

description: Lactobacillus paracollinoides gene for 16S ribosomal RNA, partial sequence, strain: JCM 15731


description: domain/bacteria

family: Prevotellaceae

full scientific name: Prevotella aurantiaca Sakamoto et al. 2010

genus: Prevotella

species: Prevotella aurantiaca

description: Prevotella aurantiaca gene for 16S ribosomal RNA, partial sequence


class: Thermoprotei

description: domain/archaea

family: Sulfolobaceae

full scientific name: Metallosphaera cuprina Liu et al. 2011

genus: Metallosphaera

order: Sulfolobales

phylum: Thermoproteota

species: Metallosphaera cuprina

phylum: Crenarchaeota

description: Metallosphaera cuprina Ar-4 partial 16S rRNA gene, type strain Ar-4T

description: ASM20492v1 assembly for Metallosphaera cuprina Ar-4


description: domain/bacteria

family: Propionibacteriaceae

full scientific name: Propioniciclava tarda Sugawara et al. 2011

genus: Propioniciclava

order: Propionibacteriales

species: Propioniciclava tarda

description: Propioniciclava tarda gene for 16S rRNA, partial sequence, strain: WR054


description: domain/bacteria

family: Acetobacteraceae

full scientific name: Acetobacter okinawensis Iino et al. 2013

genus: Acetobacter

species: Acetobacter okinawensis

description: Acetobacter okinawensis gene for 16S rRNA, partial sequence


description: domain/bacteria

full scientific name: <I>Asaia</I> Yamada et al. 2000

genus: Asaia

species: Asaia sp.

full scientific name: <I>Asaia</I> sp.


description: domain/bacteria

family: Nocardiaceae

full scientific name: Nocardia abscessus Yassin et al. 2000

genus: Nocardia

species: Nocardia abscessus


description: domain/bacteria

full scientific name: Nocardia nova Tsukamura 1983

species: Nocardia nova


description: domain/bacteria

full scientific name: Nocardia brasiliensis (Lindenberg 1909) Pinoy 1913 (Approved Lists 1980)

species: Nocardia brasiliensis

synonym: Discomyces brasiliensis


description: domain/bacteria

full scientific name: Nocardia farcinica Trevisan 1889 (Approved Lists 1980)

species: Nocardia farcinica

full scientific name: Nocardia farcinica Trevisan 1889


description: domain/bacteria

full scientific name: Nocardia transvalensis Pijper and Pullinger 1927 (Approved Lists 1980)

species: Nocardia transvalensis


description: domain/bacteria

full scientific name: <I>Nocardia</I> Trevisan 1889 (Approved Lists 1980)

species: Nocardia sp.

synonym: Micropolyspora

full scientific name: <I>Nocardia</I> sp.


description: domain/bacteria

full scientific name: Nocardia brasiliensis (Lindenberg 1909) Pinoy 1913


description: domain/bacteria

full scientific name: Nocardia carnea (Rossi Doria 1891) Castellani and Chalmers 1913 (Approved Lists 1980)

species: Nocardia carnea

synonym: Streptothrix carnea


description: domain/bacteria

full scientific name: Nocardia cyriacigeorgica corrig. Yassin et al. 2001

species: Nocardia cyriacigeorgica

synonym: Nocardia cyriacigeorgici

full scientific name: Nocardia cyriacigeorgica Yassin et al. 2001


description: domain/bacteria

full scientific name: Nocardia otitidiscaviarum corrig. Snijders 1924 (Approved Lists 1980)

species: Nocardia otitidiscaviarum

synonym: Nocardia caviae

full scientific name: Nocardia otitidiscaviarum Snijders 1924


description: domain/bacteria

full scientific name: Nocardia mikamii Jannat-Khah et al. 2010

species: Nocardia mikamii


description: domain/bacteria

full scientific name: Nocardia aobensis Kageyama et al. 2005

species: Nocardia aobensis


description: domain/bacteria

full scientific name: Nocardia exalbida Iida et al. 2006

species: Nocardia exalbida


description: domain/bacteria

full scientific name: Nocardia elegans Yassin and Brenner 2005

species: Nocardia elegans


description: domain/bacteria

description: ASM302386v1 assembly for Nocardia nova ATCC 33727


description: domain/bacteria

family: Alteromonadaceae

full scientific name: <I>Marinobacter</I> Gauthier et al. 1992

genus: Marinobacter

order: Alteromonadales

species: Marinobacter sp.

full scientific name: <I>Marinobacter</I> sp.


description: domain/bacteria

family: Promicromonosporaceae

full scientific name: Isoptericola salitolerans Guan et al. 2025

genus: Isoptericola

species: Isoptericola salitolerans

full scientific name: Isoptericola salitolerans Guan et al.

description: Isoptericola salitolerans strain TRM F109 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Porphyromonadaceae

full scientific name: Porphyromonas gingivicanis Hirasawa and Takada 1994

genus: Porphyromonas

species: Porphyromonas gingivicanis

description: Porphyromonas gingivicanis gene for 16S ribosomal RNA, partial sequence, strain: JCM 15907

description: Porphyromonas gingivicanis gene for 16S rRNA, partial sequence, strain: ATCC 55562.

description: Porphyromonas gingivicanis strain ATCC 55562 16S ribosomal RNA gene, partial sequence.

description: Porphyromonas gingivicanis strain ATCC 55562 16S-23S ribosomal RNA intergenic spacer, partial sequence.

description: ASM61458v1 assembly for Porphyromonas gingivicanis JCM 15907


description: domain/bacteria

family: Rikenellaceae

full scientific name: Alistipes indistinctus Nagai et al. 2010

genus: Alistipes

species: Alistipes indistinctus

description: Bacteroidetes bacterium Eg28 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Mediterraneibacter faecis (Kim et al. 2011) Togo et al. 2019

genus: Mediterraneibacter

species: Mediterraneibacter faecis

synonym: Ruminococcus faecis

description: Ruminococcus faecis JCM 15917 strain Eg2 16S ribosomal RNA gene, partial sequence

description: ASM131250v1 assembly for Mediterraneibacter faecis JCM 15917


description: domain/bacteria

family: Oceanospirillaceae

full scientific name: <I>Neptuniibacter</I> Arahal et al. 2007

genus: Neptuniibacter

order: Oceanospirillales

species: Neptuniibacter sp.

full scientific name: <I>Neptuniibacter</I> sp.

description: Neptuniibacter sp. CAR-SF gene for 16S rRNA, partial sequence


class: Flavobacteriia

description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Aquimarina litoralis Oh et al. 2025

genus: Aquimarina

order: Flavobacteriales

species: Aquimarina litoralis

full scientific name: Aquimarina litoralis Oh et al.

description: Aquimarina litoralis strain CNURIC011 16S ribosomal RNA gene, partial sequence

description: ASM3952399v1 assembly for Aquimarina litoralis JCM 15974


description: domain/bacteria

full scientific name: Tenacibaculum jejuense Oh et al. 2012

genus: Tenacibaculum

species: Tenacibaculum jejuense

description: Tenacibaculum jejuense strain CNURIC013 16S ribosomal RNA gene, partial sequence

description: Tjejuense_V1 assembly for Tenacibaculum jejuense type strain: KCTC 22618


description: domain/bacteria

full scientific name: Gaetbulibacter jejuensis Oh et al. 2025

genus: Gaetbulibacter

species: Gaetbulibacter jejuensis

full scientific name: Gaetbulibacter jejuensis Oh et al.

description: Gaetbulibacter jejuensis strain CNURIC014 16S ribosomal RNA gene, partial sequence

description: ASM3952401v1 assembly for Gaetbulibacter jejuensis JCM 15976


class: Bacilli

description: domain/bacteria

family: Lactobacillaceae

full scientific name: Fructilactobacillus florum (Endo et al. 2010) Zheng et al. 2020

genus: Fructilactobacillus

species: Fructilactobacillus florum

synonym: Lactobacillus florum

description: Lactobacillus florum gene for 16S rRNA, partial sequence, strain: F9-2