description: domain/bacteria

family: Thermoactinomycetaceae

full scientific name: <I>Laceyella</I> Yoon et al. 2005

genus: Laceyella

order: Caryophanales

species: Laceyella sp.


Matching level: species

class: Gammaproteobacteria

description: domain/bacteria

domain: Bacteria

family: Enterobacteriaceae

full scientific name: Shigella sonnei (Levine 1920) Weldin 1927 (Approved Lists 1980)

genus: Shigella

keyword: phylum/pseudomonadota

order: Enterobacterales

phylum: Pseudomonadota

species: Shigella sonnei

synonym: Bacterium sonnei

phylum: Proteobacteria

type strain: no


class: Betaproteobacteria

description: domain/bacteria

family: Neisseriaceae

full scientific name: Neisseria meningitidis (Albrecht and Ghon 1901) Murray 1929 (Approved Lists 1980)

genus: Neisseria

order: Neisseriales

species: Neisseria meningitidis

synonym: Micrococcus meningitidis


class: Actinomycetes

description: domain/bacteria

family: Actinomycetaceae

full scientific name: Gleimia hominis (Funke et al. 2010) Nouioui et al. 2018

genus: Gleimia

keyword: phylum/actinomycetota

order: Actinomycetales

phylum: Actinomycetota

species: Gleimia hominis

synonym: Actinomyces hominis

class: Actinobacteria

phylum: Actinobacteria


class: Sphingobacteriia

description: domain/bacteria

family: Sphingobacteriaceae

full scientific name: Mucilaginibacter calamicampi Yoon et al. 2013

genus: Mucilaginibacter

keyword: phylum/bacteroidota

order: Sphingobacteriales

phylum: Bacteroidota

species: Mucilaginibacter calamicampi

phylum: Bacteroidetes

type strain: yes

assembly level: contig

description: ASM4267676v1 assembly for Mucilaginibacter calamicampi CCUG 63418


class: Epsilonproteobacteria

description: domain/bacteria

family: Campylobacteraceae

full scientific name: Campylobacter upsaliensis Sandstedt and Ursing 1991

genus: Campylobacter

order: Campylobacterales

species: Campylobacter upsaliensis


description: domain/bacteria

family: Erwiniaceae

full scientific name: Mixta calida (Popp et al. 2010) Palmer et al. 2018

genus: Mixta

species: Mixta calida

synonym: Pantoea calida

genus: Pantoea

species: Pantoea calida


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium glucuronolyticum Funke et al. 1995

genus: Corynebacterium

order: Mycobacteriales

species: Corynebacterium glucuronolyticum

synonym: Corynebacterium seminale


class: Bacilli

description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lactobacillus catenaformis corrig. (Eggerth 1935) Moore and Holdeman 1970 (Approved Lists 1980)

genus: Lactobacillus

keyword: phylum/bacillota

order: Lactobacillales

phylum: Bacillota

species: Lactobacillus catenaformis

synonym: Lactobacillus catenaforme

synonym: Eggerthia catenaformis

synonym: Catenabacterium catenaforme

synonym: Bacteroides catenaformis

class: Erysipelotrichia

family: Erysipelotrichaceae

genus: Eggerthia

phylum: Firmicutes

species: Eggerthia catenaformis


description: domain/bacteria

family: Moraxellaceae

full scientific name: Acinetobacter variabilis Krizova et al. 2015

genus: Acinetobacter

order: Pseudomonadales

species: Acinetobacter variabilis

synonym: Acinetobacter refrigeratoris

synonym: Acinetobacter refrigeratorensis


description: domain/bacteria

full scientific name: Corynebacterium pyruviciproducens Tong et al. 2010

species: Corynebacterium pyruviciproducens


description: domain/bacteria

full scientific name: Corynebacterium coyleae Funke et al. 1997

species: Corynebacterium coyleae


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus infantarius Schlegel et al. 2000

genus: Streptococcus

species: Streptococcus infantarius

synonym: Streptococcus infantarius


class: Alphaproteobacteria

description: domain/bacteria

family: Roseobacteraceae

full scientific name: Rhodovulum salis Srinivas et al. 2014

genus: Rhodovulum

order: Rhodobacterales

species: Rhodovulum salis

family: Rhodobacteraceae

database: nuccore

description: Rhodovulum salis partial 16S rRNA gene, type strain JA746T


description: domain/bacteria

family: Caryophanaceae

full scientific name: Savagea faecisuis Whitehead et al. 2015

genus: Savagea

species: Savagea faecisuis

family: Planococcaceae

assembly level: scaffold

description: ASM4267560v1 assembly for Savagea faecisuis CCUG 63563


description: domain/bacteria

full scientific name: Kingella kingae (Henriksen and Bøvre 1968) Henriksen and Bøvre 1976 (Approved Lists 1980)

genus: Kingella

species: Kingella kingae

synonym: Moraxella kingii


class: Clostridia

description: domain/bacteria

family: Clostridiaceae

full scientific name: Clostridium novyi (Migula 1900) Bergey et al. 1923 (Approved Lists 1980)

genus: Clostridium

order: Eubacteriales

species: Clostridium novyi

synonym: Bacillus novyi


class: Bacteroidia

description: domain/bacteria

family: Bacteroidaceae

full scientific name: Bacteroides pyogenes Benno et al. 1983

genus: Bacteroides

order: Bacteroidales

species: Bacteroides pyogenes

synonym: Bacteroides suis

synonym: Bacteroides tectus

synonym: Bacteroides tectum


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980)

genus: Staphylococcus

species: Staphylococcus aureus

synonym: Staphylococcus aureus subsp. anaerobius

synonym: Staphylococcus roterodami

assembly level: complete

description: 40415_D02 assembly for Staphylococcus aureus NCTC13552


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Salmonella bongori (Le Minor et al. 1985) Reeves et al. 1989

genus: Salmonella

species: Salmonella bongori

synonym: Salmonella enterica subsp. bongori

synonym: Salmonella choleraesuis subsp. bongori


Matching level: subspecies

description: domain/bacteria

full scientific name: Salmonella enterica subsp. arizonae (Borman 1957) Le Minor and Popoff 1987

species: Salmonella enterica subsp. arizonae

synonym: Salmonella arizonae

synonym: Salmonella choleraesuis subsp. arizonae

synonym: Paracolobactrum arizonae


description: domain/bacteria

full scientific name: Salmonella enterica subsp. diarizonae (Le Minor et al. 1985) Le Minor and Popoff 1987

species: Salmonella enterica subsp. diarizonae

synonym: Salmonella choleraesuis subsp. diarizonae

synonym: Salmonella diarizonae


description: domain/bacteria

family: Actinomycetaceae

full scientific name: Actinomyces urogenitalis Nikolaitchouk et al. 2000

genus: Actinomyces

species: Actinomyces urogenitalis


class: Fusobacteriia

description: domain/bacteria

family: Leptotrichiaceae

full scientific name: Leptotrichia wadei Eribe et al. 2004

genus: Leptotrichia

keyword: phylum/fusobacteriota

order: Fusobacteriales

phylum: Fusobacteriota

species: Leptotrichia wadei

phylum: Fusobacteria


description: domain/bacteria

full scientific name: Streptococcus pneumoniae (Klein 1884) Chester 1901 (Approved Lists 1980)

species: Streptococcus pneumoniae

synonym: Micrococcus pneumoniae

synonym: Staphylococcus pneumoniae

description: ASM164284v1 assembly for Streptococcus pneumoniae CCUG 63665


class: Flavobacteriia

description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Tenacibaculum halocynthiae Kim et al. 2013

genus: Tenacibaculum

order: Flavobacteriales

species: Tenacibaculum halocynthiae


description: domain/bacteria

full scientific name: Geojedonia litorea Park et al. 2013

genus: Geojedonia

species: Geojedonia litorea

description: ASM4265452v1 assembly for Geojedonia litorea CCUG 63682


description: domain/bacteria

full scientific name: Streptococcus mitis Andrewes and Horder 1906 (Approved Lists 1980)

species: Streptococcus mitis

synonym: Streptococcus hohhotensis

synonym: Streptococcus humanilactis

synonym: Streptococcus chosunense

synonym: Streptococcus gwangjuense

synonym: Streptococcus toyakuensis

synonym: Streptococcus gwangjuensis

synonym: Streptococcus chosunensis

description: ASM201479v1 assembly for Streptococcus mitis CCUG 63687


description: domain/bacteria

family: Peptostreptococcaceae

full scientific name: Paeniclostridium sordellii (Hall and Scott 1927) Sasi Jyothsna et al. 2016

genus: Paeniclostridium

order: Peptostreptococcales

species: Paeniclostridium sordellii

synonym: Bacillus sordellii

synonym: Clostridium sordellii

synonym: Paraclostridium sordellii


description: domain/bacteria

family: Tannerellaceae

full scientific name: Parabacteroides goldsteinii (Song et al. 2006) Sakamoto and Benno 2006

genus: Parabacteroides

species: Parabacteroides goldsteinii

synonym: Bacteroides goldsteinii


description: domain/bacteria

full scientific name: Bacteroides cellulosilyticus Robert et al. 2007

species: Bacteroides cellulosilyticus


description: domain/bacteria

full scientific name: Streptococcus pseudopneumoniae Arbique et al. 2005

species: Streptococcus pseudopneumoniae

description: ASM201495v1 assembly for Streptococcus pseudopneumoniae CCUG 63747


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Haemophilus parahaemolyticus Pittman 1953 (Approved Lists 1980)

genus: Haemophilus

order: Pasteurellales

species: Haemophilus parahaemolyticus

synonym: Pseudohaemophilus parahaemolyticus


description: domain/bacteria

full scientific name: Trueperella pyogenes (Glage 1903) Yassin et al. 2011

genus: Trueperella

species: Trueperella pyogenes

synonym: Actinomyces pyogenes

synonym: Corynebacterium pyogenes

synonym: Arcanobacterium pyogenes

synonym: Bacillus pyogenes


description: domain/bacteria

full scientific name: Moraxella nonliquefaciens (Scarlett 1916) Lwoff 1939 (Approved Lists 1980)

genus: Moraxella

species: Moraxella nonliquefaciens


culture collection no.: CCUG 63759 A

description: domain/bacteria

full scientific name: Actinobaculum massiliense corrig. Greub and Raoult 2002

genus: Actinobaculum

species: Actinobaculum massiliense

synonym: Actinobaculum massiliae


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Ligilactobacillus murinus (Hemme et al. 1982) Zheng et al. 2020

genus: Ligilactobacillus

species: Ligilactobacillus murinus

synonym: Lactobacillus murinus

genus: Lactobacillus

species: Lactobacillus murinus


description: domain/bacteria

family: Alteromonadaceae

full scientific name: Marinobacter piscis corrig. Hedi et al. 2025

genus: Marinobacter

order: Alteromonadales

species: Marinobacter piscis

synonym: Marinobacter piscensis

full scientific name: Marinobacter piscensis

species: Marinobacter piscensis

strain designation: Abdou 3, Abdou3

description: Marinobacter sp. Abdou3 16S ribosomal RNA gene, partial sequence

description: ASM767165v1 assembly for Marinobacter piscensis Abdou3


description: domain/bacteria

family: Weeksellaceae

full scientific name: Empedobacter falsenii (Kämpfer et al. 2006) Zhang et al. 2014

genus: Empedobacter

species: Empedobacter falsenii

synonym: Wautersiella falsenii

genus: Wautersiella

species: Wautersiella falsenii


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus pyogenes Rosenbach 1884 (Approved Lists 1980)

genus: Streptococcus

species: Streptococcus pyogenes


description: domain/bacteria

full scientific name: Lysinibacillus sphaericus (Meyer and Neide 1904) Ahmed et al. 2007

genus: Lysinibacillus

order: Caryophanales

species: Lysinibacillus sphaericus

synonym: Lysinibacillus varians

synonym: Lysinibacillus mangiferihumi

synonym: Bacillus sphaericus

synonym: Lysinibacillus tabacifolii

synonym: Lysinibacillus mangiferahumi

family: Bacillaceae


description: domain/bacteria

family: Nocardiaceae

full scientific name: Nocardia farcinica Trevisan 1889 (Approved Lists 1980)

genus: Nocardia

species: Nocardia farcinica


description: domain/bacteria

description: ASM1171483v1 assembly for Streptococcus pseudopneumoniae CCUG 63793


description: domain/bacteria

family: Paracoccaceae

full scientific name: Paracoccus communis Poroshina et al. 2014

genus: Paracoccus

species: Paracoccus communis

family: Rhodobacteraceae


culture collection no.: CCUG 63811 A

description: domain/bacteria

family: Prevotellaceae

full scientific name: Prevotella disiens (Holdeman and Johnson 1977) Shah and Collins 1990

genus: Prevotella

species: Prevotella disiens

synonym: Bacteroides disiens


culture collection no.: CCUG 63811 B

description: domain/bacteria

full scientific name: Schaalia turicensis (Wüst et al. 1995) Nouioui et al. 2018

genus: Schaalia

species: Schaalia turicensis

synonym: Actinomyces turicensis


description: domain/bacteria

family: Clostridiaceae

full scientific name: Clostridium tertium (Henry 1917) Bergey et al. 1923 (Approved Lists 1980)

genus: Clostridium

species: Clostridium tertium

synonym: Bacillus tertius


description: domain/bacteria

family: Roseobacteraceae

full scientific name: Aestuariihabitans beolgyonensis Yoon et al. 2014

genus: Aestuariihabitans

species: Aestuariihabitans beolgyonensis


description: domain/bacteria

full scientific name: Jejudonia soesokkakensis Park et al. 2013

genus: Jejudonia

species: Jejudonia soesokkakensis

description: Jejudonia soesokkakensis strain SSK1-1 16S ribosomal RNA gene, partial sequence

description: ASM4266479v1 assembly for Jejudonia soesokkakensis CCUG 63830


description: domain/bacteria

full scientific name: Flaviramulus multivorans (Park et al. 2014) Liu et al. 2023

genus: Flaviramulus

species: Flaviramulus multivorans

synonym: Sabulilitoribacter multivorans

genus: Sabulilitoribacter

species: Sabulilitoribacter multivorans

description: ASM4267554v1 assembly for Flaviramulus multivorans CCUG 63831


description: domain/bacteria

full scientific name: Winogradskyella undariae Park and Yoon 2014

genus: Winogradskyella

species: Winogradskyella undariae

description: ASM1328515v1 assembly for Winogradskyella undariae CCUG 63832


description: domain/bacteria

family: Moraxellaceae

full scientific name: Acinetobacter bohemicus Krizova et al. 2015

genus: Acinetobacter

species: Acinetobacter bohemicus

synonym: Acinetobacter pakistanensis

description: Acinetobacter sp. ANC 4253 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria


culture collection no.: CCUG 63870 Q

description: domain/bacteria

full scientific name: Clostridium frigidicarnis Broda et al. 1999

species: Clostridium frigidicarnis


description: domain/bacteria

full scientific name: Paraglaciecola chathamensis (Matsuyama et al. 2006) Shivaji and Reddy 2014

genus: Paraglaciecola

species: Paraglaciecola chathamensis

synonym: Paraglaciecola oceanifecundans

synonym: Glaciecola chathamensis

synonym: Glaciecola agarilytica

synonym: Paraglaciecola agarilytica

species: Paraglaciecola oceanifecundans

description: Paraglaciecola agarilytica strain 162Z-12 16S ribosomal RNA gene, partial sequence

description: ASM1465259v1 assembly for Paraglaciecola chathamensis KCTC 32337


culture collection no.: CCUG 63897 Q

description: domain/bacteria

family: Burkholderiaceae

full scientific name: Burkholderia gladioli (Severini 1913) Yabuuchi et al. 1993

genus: Burkholderia

order: Burkholderiales

species: Burkholderia gladioli

synonym: Burkholderia cocovenenans

synonym: Pseudomonas cocovenenans

synonym: Pseudomonas antimicrobica

synonym: Pseudomonas gladioli


culture collection no.: CCUG 63914 Q

description: domain/bacteria

family: Dermabacteraceae

full scientific name: Brachybacterium conglomeratum (ex Migula 1900) Takeuchi et al. 1995

genus: Brachybacterium

order: Micrococcales

species: Brachybacterium conglomeratum


description: domain/bacteria

family: Alcaligenaceae

full scientific name: Achromobacter ruhlandii (Packer and Vishniac 1955) Yabuuchi et al. 1998

genus: Achromobacter

species: Achromobacter ruhlandii

synonym: Alcaligenes ruhlandii

synonym: Hydrogenomonas ruhlandii


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

order: Enterobacterales

species: Escherichia coli

synonym: Bacillus coli


description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus faecalis (Andrewes and Horder 1906) Schleifer and Kilpper-Bälz 1984

genus: Enterococcus

species: Enterococcus faecalis

synonym: Streptococcus faecalis


description: domain/bacteria

full scientific name: Klebsiella pneumoniae (Schroeter 1886) Trevisan 1887 (Approved Lists 1980)

genus: Klebsiella

species: Klebsiella pneumoniae

synonym: Hyalococcus pneumoniae


description: domain/bacteria

full scientific name: Streptococcus agalactiae Lehmann and Neumann 1896 (Approved Lists 1980)

genus: Streptococcus

species: Streptococcus agalactiae

synonym: Streptococcus difficile

synonym: Streptococcus difficilis


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus simulans Kloos and Schleifer 1975 (Approved Lists 1980)

genus: Staphylococcus

species: Staphylococcus simulans


description: domain/bacteria

family: Morganellaceae

full scientific name: Proteus mirabilis Hauser 1885 (Approved Lists 1980)

genus: Proteus

species: Proteus mirabilis


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)

genus: Pseudomonas

species: Pseudomonas aeruginosa

synonym: Pseudomonas paraeruginosa

synonym: Bacterium aeruginosum


class: Coriobacteriia

description: domain/bacteria

family: Eggerthellaceae

full scientific name: Slackia exigua (Poco et al. 1996) Wade et al. 1999

genus: Slackia

order: Eggerthellales

species: Slackia exigua

synonym: Eubacterium exiguum


description: domain/bacteria

full scientific name: Enterococcus raffinosus Collins et al. 1989

species: Enterococcus raffinosus


description: domain/bacteria

family: Micrococcaceae

full scientific name: Rothia amarae Fan et al. 2002

genus: Rothia

species: Rothia amarae


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Aggregatibacter segnis (Kilian 1977) Nørskov-Lauritsen and Kilian 2006

genus: Aggregatibacter

species: Aggregatibacter segnis

synonym: Haemophilus segnis


culture collection no.: CCUG 64020 Q

description: domain/bacteria

family: Leptotrichiaceae

full scientific name: Streptobacillus moniliformis Levaditi et al. 1925 (Approved Lists 1980)

genus: Streptobacillus

species: Streptobacillus moniliformis


description: domain/bacteria

family: Lysobacteraceae

full scientific name: Stenotrophomonas maltophilia (Hugh 1981 ex Hugh and Ryschenkow 1961) Palleroni and Bradbury 1993

genus: Stenotrophomonas

order: Lysobacterales

species: Stenotrophomonas maltophilia

synonym: Stenotrophomonas africana

synonym: Xanthomonas maltophilia

synonym: Pseudomonas maltophilia


description: domain/bacteria

full scientific name: Moraxella catarrhalis (Frosch and Kolle 1896) Henriksen and Bøvre 1968 (Approved Lists 1980)

genus: Moraxella

species: Moraxella catarrhalis

synonym: Branhamella catarrhalis

synonym: Moraxella veridica

synonym: Mikrokokkus catarrhalis


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus pneumoniae (Klein 1884) Chester 1901 (Approved Lists 1980)

species: Streptococcus pneumoniae

synonym: Micrococcus pneumoniae

synonym: Staphylococcus pneumoniae


description: domain/bacteria

full scientific name: Haemophilus influenzae corrig. (Lehmann and Neumann 1896) Winslow et al. 1917 (Approved Lists 1980)

genus: Haemophilus

species: Haemophilus influenzae

synonym: Hemophilus influenzae

synonym: Bacterium influenzae


description: domain/bacteria

full scientific name: Haemophilus parainfluenzae Rivers 1922 (Approved Lists 1980)

species: Haemophilus parainfluenzae

synonym: Parahaemophilus parainfluenzae


description: domain/bacteria

full scientific name: <I>Streptococcus</I> Rosenbach 1884 (Approved Lists 1980)

species: Streptococcus sp.

synonym: Okadaella


description: domain/bacteria

family: Neisseriaceae

full scientific name: Neisseria sicca (von Lingelsheim 1908) Bergey et al. 1923 (Approved Lists 1980)

genus: Neisseria

order: Neisseriales

species: Neisseria sicca

synonym: Diplococcus siccus


description: domain/bacteria

family: Aerococcaceae

full scientific name: Aerococcus urinae Aguirre and Collins 1992

genus: Aerococcus

order: Lactobacillales

species: Aerococcus urinae


description: domain/bacteria

full scientific name: Streptococcus pseudopneumoniae Arbique et al. 2005

species: Streptococcus pseudopneumoniae

description: ASM1171485v1 assembly for Streptococcus pseudopneumoniae CCUG 64062


description: domain/bacteria

family: Actinomycetaceae

full scientific name: Actinobaculum massiliense corrig. Greub and Raoult 2002

genus: Actinobaculum

order: Actinomycetales

species: Actinobaculum massiliense

synonym: Actinobaculum massiliae


description: domain/bacteria

full scientific name: Staphylococcus schleiferi Freney et al. 1988

species: Staphylococcus schleiferi


description: domain/bacteria

full scientific name: Staphylococcus pettenkoferi Trülzsch et al. 2007

species: Staphylococcus pettenkoferi

synonym: Staphylococcus pettenkoferi


description: domain/bacteria

family: Paracoccaceae

full scientific name: Paracoccus yeei corrig. Daneshvar et al. 2003

genus: Paracoccus

order: Rhodobacterales

species: Paracoccus yeei

synonym: Paracoccus yeeii

family: Rhodobacteraceae


description: domain/bacteria

full scientific name: Aerococcus sanguinicola corrig. Lawson et al. 2001

species: Aerococcus sanguinicola

synonym: Aerococcus sanguicola


description: domain/bacteria

family: Acetobacteraceae

full scientific name: Roseomonas mucosa Han et al. 2003

genus: Roseomonas

order: Rhodospirillales

species: Roseomonas mucosa


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium diphtheriae (Kruse 1886) Lehmann and Neumann 1896 (Approved Lists 1980)

genus: Corynebacterium

order: Mycobacteriales

species: Corynebacterium diphtheriae

synonym: Bacillus diphtheriae


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Capnocytophaga sputigena Leadbetter et al. 1982

genus: Capnocytophaga

species: Capnocytophaga sputigena


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980)

genus: Staphylococcus

species: Staphylococcus aureus

synonym: Staphylococcus aureus subsp. anaerobius

synonym: Staphylococcus roterodami


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

species: Escherichia coli

synonym: Bacillus coli


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Enterocloster bolteae (Song et al. 2003) Haas and Blanchard 2020

genus: Enterocloster

order: Eubacteriales

species: Enterocloster bolteae

synonym: Clostridium bolteae

synonym: Lachnoclostridium bolteae

family: Clostridiaceae

genus: Clostridium

species: Clostridium bolteae


description: domain/bacteria

full scientific name: Actinomyces israelii corrig. (Kruse 1896) Lachner-Sandoval 1898 (Approved Lists 1980)

genus: Actinomyces

species: Actinomyces israelii

synonym: Streptothrix israelii

synonym: Actinobacterium israelii

synonym: Actinomyces israeli

synonym: Streptothrix israeli

synonym: Actinobacterium israeli


description: domain/bacteria

family: Comamonadaceae

full scientific name: Variovorax paradoxus (Davis 1969) Willems et al. 1991

genus: Variovorax

species: Variovorax paradoxus

synonym: Alcaligenes paradoxus


description: domain/bacteria

full scientific name: Actinomyces radicidentis Collins et al. 2001

species: Actinomyces radicidentis


description: domain/bacteria

family: Peptoniphilaceae

full scientific name: Anaerococcus tetradius (Ezaki et al. 1983 ex Choukévitch 1911) Ezaki et al. 2001

genus: Anaerococcus

order: Tissierellales

species: Anaerococcus tetradius

synonym: Peptostreptococcus tetradius


description: domain/bacteria

family: Nocardiopsidaceae

full scientific name: Nocardiopsis synnemataformans Yassin et al. 1997

genus: Nocardiopsis

order: Streptosporangiales

species: Nocardiopsis synnemataformans

family: Nocardiopsaceae


description: domain/bacteria

full scientific name: Staphylococcus caprae Devriese et al. 1983

species: Staphylococcus caprae


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lactobacillus jensenii Gasser et al. 1970 (Approved Lists 1980)

genus: Lactobacillus

species: Lactobacillus jensenii


description: domain/bacteria

family: Nocardiaceae

full scientific name: Nocardia asteroides (Eppinger 1891) Blanchard 1896 (Approved Lists 1980)

genus: Nocardia

species: Nocardia asteroides

synonym: Cladothrix asteroides


description: domain/bacteria

family: Kytococcaceae

full scientific name: Kytococcus schroeteri Becker et al. 2002

genus: Kytococcus

species: Kytococcus schroeteri


description: domain/bacteria

family: Actinomycetaceae

full scientific name: Actinomyces naeslundii corrig. Thompson and Lovestedt 1951 (Approved Lists 1980)

species: Actinomyces naeslundii

synonym: Actinomyces naeslundi


description: domain/bacteria

full scientific name: Corynebacterium ureicelerivorans Yassin 2007

species: Corynebacterium ureicelerivorans


description: domain/bacteria

full scientific name: Nocardia veterana Gürtler et al. 2001

species: Nocardia veterana


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus anginosus (Andrewes and Horder 1906) Smith and Sherman 1938 (Approved Lists 1980)

genus: Streptococcus

species: Streptococcus anginosus

synonym: Streptococcus anginosus


description: domain/bacteria

full scientific name: Anaerostipes caccae Schwiertz et al. 2002

genus: Anaerostipes

species: Anaerostipes caccae


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Paenibacillus barengoltzii Osman et al. 2006

genus: Paenibacillus

species: Paenibacillus barengoltzii


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium salmoniphilum (ex Ross 1960) Whipps et al. 2007

genus: Mycobacterium

species: Mycobacterium salmoniphilum

synonym: Mycobacterium salmoniphilum

synonym: Mycobacteroides salmoniphilum


description: domain/bacteria

full scientific name: Anaerococcus hydrogenalis (Ezaki et al. 1990) Ezaki et al. 2001

species: Anaerococcus hydrogenalis

synonym: Peptostreptococcus hydrogenalis


description: domain/bacteria

full scientific name: Streptococcus pyogenes Rosenbach 1884 (Approved Lists 1980)

species: Streptococcus pyogenes


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium durum Riegel et al. 1997

genus: Corynebacterium

species: Corynebacterium durum


description: domain/bacteria

family: Aerococcaceae

full scientific name: Facklamia languida Lawson et al. 1999

genus: Facklamia

species: Facklamia languida


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Pasteurella bettyae corrig. Sneath and Stevens 1990

genus: Pasteurella

order: Pasteurellales

species: Pasteurella bettyae

synonym: Pasteurella bettii


description: domain/bacteria

family: Rhizobiaceae

full scientific name: Neorhizobium huautlense (Wang et al. 1998) Mousavi et al. 2015

genus: Neorhizobium

order: Hyphomicrobiales

species: Neorhizobium huautlense

synonym: Rhizobium huautlense


description: domain/bacteria

family: Weeksellaceae

full scientific name: Empedobacter falsenii (Kämpfer et al. 2006) Zhang et al. 2014

genus: Empedobacter

order: Flavobacteriales

species: Empedobacter falsenii

synonym: Wautersiella falsenii

family: Flavobacteriaceae

genus: Wautersiella

species: Wautersiella falsenii


class: Desulfovibrionia

description: domain/bacteria

family: Desulfovibrionaceae

full scientific name: Desulfovibrio desulfuricans (Beijerinck 1895) Kluyver and van Niel 1936 (Approved Lists 1980)

genus: Desulfovibrio

keyword: phylum/thermodesulfobacteriota

order: Desulfovibrionales

phylum: Thermodesulfobacteriota

species: Desulfovibrio desulfuricans

synonym: Spirillum desulfuricans

class: Deltaproteobacteria


culture collection no.: CCUG 64306 A

description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas citronellolis Seubert 1960 (Approved Lists 1980)

genus: Pseudomonas

order: Pseudomonadales

species: Pseudomonas citronellolis

synonym: Pseudomonas humi


description: domain/bacteria

family: Turicibacteraceae

full scientific name: Turicibacter sanguinis Bosshard et al. 2002

genus: Turicibacter

order: Erysipelotrichales

species: Turicibacter sanguinis

family: Erysipelotrichaceae


description: domain/bacteria

full scientific name: Mycobacterium abscessus (Moore and Frerichs 1953) Kusunoki and Ezaki 1992

species: Mycobacterium abscessus

synonym: Mycobacterium chelonae subsp. abscessus

synonym: Mycobacterium abscessus

synonym: Mycobacteroides abscessus

synonym: Mycobacterium chelonei subsp. abscessus


description: domain/bacteria

family: Caryophanaceae

full scientific name: Ureibacillus thermosphaericus (Andersson et al. 1996) Fortina et al. 2001

genus: Ureibacillus

order: Caryophanales

species: Ureibacillus thermosphaericus

synonym: Bacillus thermosphaericus

family: Planococcaceae


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Caballeronia cordobensis (Draghi et al. 2014) Dobritsa and Samadpour 2016

genus: Caballeronia

order: Burkholderiales

species: Caballeronia cordobensis

synonym: Burkholderia cordobensis

description: Burkholderia cordobensis partial 16S rRNA gene, type strain LMG 27620T, isolate R-50210

description: ASM154457v2 assembly for Caballeronia cordobensis

description: ASM127853v1 assembly for Caballeronia cordobensis LMG 27620

description: Burkholderia cordobensis strain LMG 27620


description: domain/bacteria

family: Leptotrichiaceae

full scientific name: Sneathia amnii Harwich et al. 2012

genus: Sneathia

order: Fusobacteriales

species: Sneathia amnii


description: domain/bacteria

family: Legionellaceae

full scientific name: Legionella longbeachae McKinney et al. 1982

genus: Legionella

order: Legionellales

species: Legionella longbeachae


description: domain/bacteria

full scientific name: Corynebacterium freneyi Renaud et al. 2001

species: Corynebacterium freneyi


description: domain/bacteria

family: Rhodocyclaceae

full scientific name: Azospira oryzae Reinhold-Hurek and Hurek 2000

genus: Azospira

order: Rhodocyclales

species: Azospira oryzae

synonym: Dechloromonas suillum

synonym: Dechlorisoma suillus

synonym: Dechlorosoma suillum


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Klebsiella pneumoniae (Schroeter 1886) Trevisan 1887 (Approved Lists 1980)

genus: Klebsiella

order: Enterobacterales

species: Klebsiella pneumoniae

synonym: Hyalococcus pneumoniae


culture collection no.: CCUG 64463 B

description: domain/bacteria

family: Sphingobacteriaceae

full scientific name: Sphingobacterium spiritivorum (Holmes et al. 1982) Yabuuchi et al. 1983

genus: Sphingobacterium

order: Sphingobacteriales

species: Sphingobacterium spiritivorum

synonym: Flavobacterium yabuuchiae

synonym: Flavobacterium spiritivorum


description: domain/bacteria

family: Alcaligenaceae

full scientific name: Pelistega suis Vela et al. 2015

genus: Pelistega

species: Pelistega suis


description: domain/bacteria

family: Lysobacteraceae

full scientific name: Stenotrophomonas maltophilia (Hugh 1981 ex Hugh and Ryschenkow 1961) Palleroni and Bradbury 1993

genus: Stenotrophomonas

order: Lysobacterales

species: Stenotrophomonas maltophilia

synonym: Stenotrophomonas africana

synonym: Xanthomonas maltophilia

synonym: Pseudomonas maltophilia

description: Stenotrophomonas maltophilia 16S rRNA gene, strain LMG 10877


description: domain/bacteria

family: Actinomycetaceae

full scientific name: Trueperella bernardiae (Funke et al. 1995) Yassin et al. 2011

genus: Trueperella

order: Actinomycetales

species: Trueperella bernardiae

synonym: Arcanobacterium bernardiae

synonym: Actinomyces bernardiae


description: domain/bacteria

family: Cytobacillaceae

full scientific name: Robertmurraya siralis (Pettersson et al. 2000) Gupta et al. 2020

genus: Robertmurraya

species: Robertmurraya siralis

synonym: Bacillus siralis

family: Bacillaceae

genus: Bacillus

species: Bacillus siralis


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Vespertiliibacter pulmonis Mühldorfer et al. 2014

genus: Vespertiliibacter

species: Vespertiliibacter pulmonis


description: domain/bacteria

full scientific name: <I>Vespertiliibacter</I> Mühldorfer et al. 2014

species: Vespertiliibacter sp.


description: domain/bacteria

family: Neisseriaceae

full scientific name: Neisseria elongata Bøvre and Holten 1970 (Approved Lists 1980)

genus: Neisseria

order: Neisseriales

species: Neisseria elongata


description: domain/bacteria

full scientific name: Actinomyces oris Henssge et al. 2009

genus: Actinomyces

species: Actinomyces oris


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus oralis subsp. tigurinus (Zbinden et al. 2012) Jensen et al. 2016

genus: Streptococcus

order: Lactobacillales

species: Streptococcus oralis subsp. tigurinus

synonym: Streptococcus tigurinus


description: domain/bacteria

full scientific name: Ralstonia pickettii (Ralston et al. 1973) Yabuuchi et al. 1996

genus: Ralstonia

species: Ralstonia pickettii

synonym: Pseudomonas pickettii

synonym: Burkholderia pickettii


description: domain/bacteria

family: Atopobiaceae

full scientific name: Lancefieldella parvula (Weinberg et al. 1937) Nouioui et al. 2018

genus: Lancefieldella

order: Coriobacteriales

species: Lancefieldella parvula

synonym: Atopobium parvulum

synonym: Peptostreptococcus parvulus

synonym: Streptococcus parvulus


description: domain/bacteria

full scientific name: Enterobacter ludwigii Hoffmann et al. 2005

genus: Enterobacter

species: Enterobacter ludwigii


culture collection no.: CCUG 64653 Q

description: domain/bacteria

family: Campylobacteraceae

full scientific name: Campylobacter rectus (Tanner et al. 1981) Vandamme et al. 1991

genus: Campylobacter

order: Campylobacterales

species: Campylobacter rectus

synonym: Wolinella recta


description: domain/bacteria

family: Yersiniaceae

full scientific name: Yersinia enterocolitica (Schleifstein and Coleman 1939) Frederiksen 1964 (Approved Lists 1980)

genus: Yersinia

species: Yersinia enterocolitica

synonym: Bacterium enterocoliticum


description: domain/bacteria

full scientific name: Citrobacter freundii (Braak 1928) Werkman and Gillen 1932 (Approved Lists 1980)

genus: Citrobacter

species: Citrobacter freundii

synonym: Bacterium freundii

synonym: Bethesda ballerupensis


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium sundsvallense Collins et al. 1999

genus: Corynebacterium

order: Mycobacteriales

species: Corynebacterium sundsvallense


description: domain/bacteria

full scientific name: Corynebacterium timonense Merhej et al. 2009

species: Corynebacterium timonense


description: domain/bacteria

family: Micrococcaceae

full scientific name: <I>Auritidibacter</I> Yassin et al. 2011

genus: Auritidibacter

order: Micrococcales

species: Auritidibacter sp.


description: domain/bacteria

full scientific name: Corynebacterium pyruviciproducens Tong et al. 2010

species: Corynebacterium pyruviciproducens


description: domain/bacteria

full scientific name: Cronobacter sakazakii (Farmer et al. 1980) Iversen et al. 2008

genus: Cronobacter

species: Cronobacter sakazakii

synonym: Enterobacter sakazakii

synonym: Cronobacter sakazakii


description: domain/bacteria

full scientific name: Neisseria weaveri Holmes et al. 1993

species: Neisseria weaveri

synonym: Neisseria weaveri

order: Not assigned to order


description: domain/bacteria

family: Roseobacteraceae

full scientific name: Roseovarius aquimarinus Kang et al. 2015

genus: Roseovarius

order: Rhodobacterales

species: Roseovarius aquimarinus

family: Rhodobacteraceae

description: ASM4267556v1 assembly for Roseovarius aquimarinus CCUG 64792


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Salegentibacter chungangensis Siamphan and Kim 2014

genus: Salegentibacter

order: Flavobacteriales

species: Salegentibacter chungangensis

description: ASM4267840v1 assembly for Salegentibacter chungangensis CCUG 64793


description: domain/bacteria

full scientific name: Salinimicrobium soli Kim et al. 2016

genus: Salinimicrobium

species: Salinimicrobium soli

description: Salinimicrobium soli 16S ribosomal RNA gene, partial sequence

description: ASM4832365v1 assembly for Salinimicrobium soli KCTC 32163


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Lacrimispora xylanolytica (Rogers and Baecker 1991) Haas and Blanchard 2020

genus: Lacrimispora

order: Eubacteriales

species: Lacrimispora xylanolytica

synonym: Clostridium xylanolyticum

family: Clostridiaceae

genus: Clostridium

species: Clostridium xylanolyticum


description: domain/bacteria

family: Comamonadaceae

full scientific name: Delftia acidovorans (den Dooren de Jong 1926) Wen et al. 1999

genus: Delftia

order: Burkholderiales

species: Delftia acidovorans

synonym: Comamonas acidovorans

synonym: Pseudomonas acidovorans


description: domain/bacteria

family: Aerococcaceae

full scientific name: Aerococcus sanguinicola corrig. Lawson et al. 2001

genus: Aerococcus

species: Aerococcus sanguinicola

synonym: Aerococcus sanguicola


description: domain/bacteria

family: Weeksellaceae

full scientific name: Chryseobacterium indologenes (Yabuuchi et al. 1983) Vandamme et al. 1994

genus: Chryseobacterium

species: Chryseobacterium indologenes

synonym: Flavobacterium indologenes


description: domain/bacteria

family: Coriobacteriaceae

full scientific name: Collinsella aerofaciens (Eggerth 1935) Kageyama et al. 1999

genus: Collinsella

species: Collinsella aerofaciens

synonym: Eubacterium aerofaciens

synonym: Bacteroides aerofaciens


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas citronellolis Seubert 1960 (Approved Lists 1980)

genus: Pseudomonas

order: Pseudomonadales

species: Pseudomonas citronellolis

synonym: Pseudomonas humi


description: domain/bacteria

family: Rikenellaceae

full scientific name: Alistipes onderdonkii Song et al. 2006

genus: Alistipes

order: Bacteroidales

species: Alistipes onderdonkii


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980)

genus: Staphylococcus

order: Caryophanales

species: Staphylococcus aureus

synonym: Staphylococcus aureus subsp. anaerobius

synonym: Staphylococcus roterodami


description: domain/bacteria

full scientific name: Staphylococcus epidermidis (Winslow and Winslow 1908) Evans 1916 (Approved Lists 1980)

species: Staphylococcus epidermidis

synonym: Albococcus epidermidis


description: domain/bacteria

full scientific name: Campylobacter corcagiensis Koziel et al. 2014

genus: Campylobacter

species: Campylobacter corcagiensis


description: domain/bacteria

family: Bartonellaceae

full scientific name: Brucella anthropi (Holmes et al. 1988) Hördt et al. 2020

genus: Brucella

order: Hyphomicrobiales

species: Brucella anthropi

synonym: Ochrobactrum anthropi

family: Brucellaceae

genus: Ochrobactrum

species: Ochrobactrum anthropi


description: domain/bacteria

family: Sneathiellaceae

full scientific name: Sneathiella chungangensis Siamphan et al. 2014

genus: Sneathiella

order: Sneathiellales

species: Sneathiella chungangensis

description: Sneathiella chungangensis strain CECT 8513 16S ribosomal RNA gene, partial sequence.

description: ASM988293v1 assembly for Sneathiella chungangensis KCTC 32476

description: ASM1272012v1 assembly for Sneathiella chungangensis KCTC32476

description: ASM4265154v1 assembly for Sneathiella chungangensis CECT 8513


description: domain/bacteria

family: Helicobacteraceae

full scientific name: Helicobacter pylori (Marshall et al. 1985) Goodwin et al. 1989

genus: Helicobacter

species: Helicobacter pylori

synonym: Campylobacter pylori

synonym: Campylobacter pyloridis

synonym: Helicobacter nemestrinae


description: domain/bacteria

family: Actinomycetaceae

full scientific name: Actinomyces oris Henssge et al. 2009

genus: Actinomyces

order: Actinomycetales

species: Actinomyces oris


description: domain/bacteria

family: Peptostreptococcaceae

full scientific name: Clostridioides difficile (Hall and O'Toole 1935) Lawson et al. 2016

genus: Clostridioides

order: Peptostreptococcales

species: Clostridioides difficile

synonym: Peptoclostridium difficile

synonym: Bacillus difficilis

synonym: Clostridium difficile


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Cupriavidus pauculus (Vandamme et al. 1999) Vandamme and Coenye 2004

genus: Cupriavidus

species: Cupriavidus pauculus

synonym: Wautersia paucula

synonym: Ralstonia paucula


description: domain/bacteria

family: Neisseriaceae

full scientific name: Kingella kingae (Henriksen and Bøvre 1968) Henriksen and Bøvre 1976 (Approved Lists 1980)

genus: Kingella

order: Neisseriales

species: Kingella kingae

synonym: Moraxella kingii


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus pneumoniae (Klein 1884) Chester 1901 (Approved Lists 1980)

genus: Streptococcus

order: Lactobacillales

species: Streptococcus pneumoniae

synonym: Micrococcus pneumoniae

synonym: Staphylococcus pneumoniae


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Actinobacillus ureae (Jones 1962) Mutters et al. 1986

genus: Actinobacillus

order: Pasteurellales

species: Actinobacillus ureae

synonym: Pasteurella ureae


description: domain/bacteria

family: Aeromonadaceae

full scientific name: Aeromonas caviae (Scherago 1936) Popoff 1984

genus: Aeromonas

order: Aeromonadales

species: Aeromonas caviae

synonym: Aeromonas punctata

synonym: Aeromonas hydrophila subsp. anaerogenes

synonym: Aeromonas punctata subsp. caviae

synonym: Bacillus punctatus

synonym: Pseudomonas caviae


description: domain/bacteria

full scientific name: Streptococcus cuniculi Vela et al. 2014

species: Streptococcus cuniculi

description: ASM192184v1 assembly for Streptococcus cuniculi CCUG 65085


description: domain/bacteria

family: Oscillospiraceae

full scientific name: Anaerotruncus colihominis Lawson et al. 2004

genus: Anaerotruncus

species: Anaerotruncus colihominis

family: Ruminococcaceae


description: domain/bacteria

family: Aerococcaceae

full scientific name: Globicatella sanguinis corrig. Collins et al. 1995

genus: Globicatella

species: Globicatella sanguinis

synonym: Globicatella sanguis


class: Negativicutes

description: domain/bacteria

family: Veillonellaceae

full scientific name: Dialister micraerophilus Jumas-Bilak et al. 2005

genus: Dialister

order: Veillonellales

species: Dialister micraerophilus


description: domain/bacteria

full scientific name: Abiotrophia defectiva (Bouvet et al. 1989) Kawamura et al. 1995

genus: Abiotrophia

species: Abiotrophia defectiva

synonym: Streptococcus defectivus


description: domain/bacteria

full scientific name: <I>Streptococcus</I> Rosenbach 1884 (Approved Lists 1980)

species: Streptococcus sp.

synonym: Okadaella


culture collection no.: CCUG 65111 Q

description: domain/bacteria


class: Not assigned to order

family: Not assigned to family

genus: Massilia

order: Not assigned to order

phylum: Not assigned to order

species: Massilia licheniformis


description: domain/bacteria

family: Prevotellaceae

full scientific name: Prevotella melaninogenica (Oliver and Wherry 1921) Shah and Collins 1990

genus: Prevotella

species: Prevotella melaninogenica

synonym: Bacteroides melaninogenicus

synonym: Bacterium melaninogenicum


class: Gammaproteobacteria

description: domain/bacteria

family: Moraxellaceae

full scientific name: Moraxella lacunata (Eyre 1900) Lwoff 1939 (Approved Lists 1980)

genus: Moraxella

species: Moraxella lacunata

synonym: Bacillus lacunatus

description: ASM167926v1 assembly for Moraxella lacunata CCUG 65142


class: Betaproteobacteria

description: domain/bacteria

full scientific name: Neisseria sicca (von Lingelsheim 1908) Bergey et al. 1923 (Approved Lists 1980)

genus: Neisseria

species: Neisseria sicca

synonym: Diplococcus siccus


class: Actinomycetes

description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: Alloscardovia omnicolens Huys et al. 2007

genus: Alloscardovia

order: Bifidobacteriales

species: Alloscardovia omnicolens

class: Actinobacteria


description: domain/bacteria

full scientific name: Veillonella atypica (Rogosa 1965) Mays et al. 1982

genus: Veillonella

species: Veillonella atypica

synonym: Veillonella parvula subsp. atypica


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Robinsoniella peoriensis Cotta et al. 2009

genus: Robinsoniella

species: Robinsoniella peoriensis


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus saccharolyticus (Foubert and Douglas 1948) Kilpper-Bälz and Schleifer 1984

genus: Staphylococcus

species: Staphylococcus saccharolyticus

synonym: Peptococcus saccharolyticus

synonym: Micrococcus saccharolyticus


description: domain/bacteria

full scientific name: Pasteurella canis Mutters et al. 1985

genus: Pasteurella

species: Pasteurella canis


description: domain/bacteria

family: Micrococcaceae

full scientific name: Micrococcus lylae Kloos et al. 1974 (Approved Lists 1980)

genus: Micrococcus

order: Micrococcales

species: Micrococcus lylae


description: domain/bacteria

family: Gemellaceae

full scientific name: Gemella bergeri corrig. Collins et al. 1998

genus: Gemella

species: Gemella bergeri

synonym: Gemella bergeriae

family: Caryophanales, not assigned to family


description: domain/bacteria

full scientific name: Streptococcus pyogenes Rosenbach 1884 (Approved Lists 1980)

genus: Streptococcus

species: Streptococcus pyogenes


description: domain/bacteria

family: Peptostreptococcaceae

full scientific name: Peptostreptococcus stomatis Downes and Wade 2006

genus: Peptostreptococcus

species: Peptostreptococcus stomatis

order: Eubacteriales


description: domain/bacteria

family: Microbacteriaceae

full scientific name: Agromyces mediolanus (ex Mamoli 1939) Suzuki et al. 1996

genus: Agromyces

species: Agromyces mediolanus


description: domain/bacteria

full scientific name: Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980)

species: Staphylococcus aureus

synonym: Staphylococcus aureus subsp. anaerobius

synonym: Staphylococcus roterodami


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lactobacillus catenaformis corrig. (Eggerth 1935) Moore and Holdeman 1970 (Approved Lists 1980)

genus: Lactobacillus

species: Lactobacillus catenaformis

synonym: Lactobacillus catenaforme

synonym: Eggerthia catenaformis

synonym: Catenabacterium catenaforme

synonym: Bacteroides catenaformis

family: Erysipelotrichaceae

genus: Eggerthia

species: Eggerthia catenaformis


class: Synergistia

description: domain/bacteria

family: Dethiosulfovibrionaceae

full scientific name: Rarimicrobium hominis Jumas-Bilak et al. 2015

genus: Rarimicrobium

keyword: phylum/synergistota

order: Synergistales

phylum: Synergistota

species: Rarimicrobium hominis

family: Synergistetes, not assigned to family

order: Synergistetes, not assigned to order

phylum: Synergistetes


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium nasicanis Baumgardt et al. 2015

genus: Corynebacterium

order: Mycobacteriales

species: Corynebacterium nasicanis

description: Corynebacterium nasicanis partial 16S rRNA gene, type strain 2673/12T

description: ASM4265816v1 assembly for Corynebacterium nasicanis CCUG 65455


description: domain/bacteria

full scientific name: Corynebacterium tapiri Baumgardt et al. 2015

species: Corynebacterium tapiri

description: Corynebacterium tapiri partial 16S rRNA gene, type strain 2385/12T

description: ASM633492v1 assembly for Corynebacterium tapiri LMG 28165


description: domain/bacteria

family: Oxalobacteraceae

full scientific name: Massilia norwichensis Orthová et al. 2015

genus: Massilia

order: Burkholderiales

species: Massilia norwichensis

synonym: Telluria norwichensis

description: ASM2475324v1 assembly for Massilia norwichensis LMG 28164

description: ASM4267658v1 assembly for Massilia norwichensis CCUG 65457


class: Epsilonproteobacteria

description: domain/bacteria

family: Helicobacteraceae

full scientific name: Helicobacter canis Stanley et al. 1994

genus: Helicobacter

order: Campylobacterales

species: Helicobacter canis


description: domain/bacteria

family: Tannerellaceae

full scientific name: Parabacteroides distasonis (Eggerth and Gagnon 1933) Sakamoto and Benno 2006

genus: Parabacteroides

order: Bacteroidales

species: Parabacteroides distasonis

synonym: Bacteroides distasonis


culture collection no.: CCUG 65498 Q

class: Bacilli

description: domain/bacteria

full scientific name: Limosilactobacillus fermentum (Beijerinck 1901) Zheng et al. 2020

genus: Limosilactobacillus

species: Limosilactobacillus fermentum

synonym: Lactobacillus fermentum

synonym: Lactobacillus cellobiosus

species: Lactobacillus fermentum


culture collection no.: CCUG 65520 Q

description: domain/bacteria

family: Veillonellaceae

full scientific name: Dialister micraerophilus Jumas-Bilak et al. 2005

genus: Dialister

species: Dialister micraerophilus


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Paenibacillus contaminans Chou et al. 2009

genus: Paenibacillus

order: Caryophanales

species: Paenibacillus contaminans


description: domain/bacteria

family: Bacteroidaceae

full scientific name: Bacteroides pyogenes Benno et al. 1983

genus: Bacteroides

species: Bacteroides pyogenes

synonym: Bacteroides suis

synonym: Bacteroides tectus

synonym: Bacteroides tectum


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus simulans Kloos and Schleifer 1975 (Approved Lists 1980)

genus: Staphylococcus

species: Staphylococcus simulans


description: domain/bacteria

full scientific name: Staphylococcus epidermidis (Winslow and Winslow 1908) Evans 1916 (Approved Lists 1980)

species: Staphylococcus epidermidis

synonym: Albococcus epidermidis


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

order: Enterobacterales

species: Escherichia coli

synonym: Bacillus coli


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)

genus: Pseudomonas

order: Pseudomonadales

species: Pseudomonas aeruginosa

synonym: Pseudomonas paraeruginosa

synonym: Bacterium aeruginosum


description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus faecalis (Andrewes and Horder 1906) Schleifer and Kilpper-Bälz 1984

genus: Enterococcus

order: Lactobacillales

species: Enterococcus faecalis

synonym: Streptococcus faecalis


description: domain/bacteria

family: Moraxellaceae

full scientific name: Acinetobacter baumannii Bouvet and Grimont 1986

genus: Acinetobacter

species: Acinetobacter baumannii


description: domain/bacteria

full scientific name: Klebsiella oxytoca (Flügge 1886) Lautrop 1956 (Approved Lists 1980)

genus: Klebsiella

species: Klebsiella oxytoca

synonym: Bacillus oxytocus


description: domain/bacteria

full scientific name: Corynebacterium genitalium (ex Furness and Evangelista 1976) Jaén-Luchoro et al. 2023

species: Corynebacterium genitalium

synonym: Corynebacterium genitalium


description: domain/bacteria

full scientific name: Franconibacter pulveris (Stephan et al. 2008) Stephan et al. 2014

genus: Franconibacter

species: Franconibacter pulveris

synonym: Cronobacter pulveris

synonym: Enterobacter pulveris


description: domain/bacteria

family: Yersiniaceae

full scientific name: Serratia marcescens Bizio 1823 (Approved Lists 1980)

genus: Serratia

species: Serratia marcescens

synonym: Serratia marcescens subsp. sakuensis


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Burkholderia singularis Vandamme et al. 2017

genus: Burkholderia

species: Burkholderia singularis

description: Burkholderia sp. LMG 28154 partial 16S rRNA gene, strain LMG 28154

description: LMG28154v1 assembly for Burkholderia singularis LMG 28154


description: domain/bacteria

full scientific name: Burkholderia stagnalis De Smet et al. 2015

species: Burkholderia stagnalis

description: Burkholderia stagnalis partial 16S rRNA gene, type strain LMG 28156T

description: ASM90283027v1 assembly for Burkholderia stagnalis LMG 28156

description: ASM880212v1 assembly for Burkholderia stagnalis CCUG 65686

description: ASM90249915v1 assembly for Burkholderia stagnalis


description: domain/bacteria

full scientific name: Burkholderia territorii De Smet et al. 2015

species: Burkholderia territorii

description: Burkholderia territorii partial 16S rRNA gene, type strain LMG 28158T

description: Paenibacillus polymyxa strain LSU1 16S ribosomal RNA gene, partial sequence.

description: Burkholderia territorii strain LMG 28158 16S ribosomal RNA gene, partial sequence.

description: ASM90283305v1 assembly for Burkholderia territorii LMG 28158

description: ASM90249903v1 assembly for Burkholderia territorii

description: ASM880211v1 assembly for Burkholderia territorii CCUG 65687

description: ASM1683674v1 assembly for Burkholderia territorii DSM 107636


description: domain/bacteria

family: Neisseriaceae

full scientific name: Neisseria perflava Bergey et al. 1923 (Approved Lists 1980)

genus: Neisseria

order: Neisseriales

species: Neisseria perflava


description: domain/bacteria

family: Clostridiaceae

full scientific name: Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014

genus: Hungatella

species: Hungatella hathewayi

synonym: Clostridium hathewayi


description: domain/bacteria

full scientific name: Neisseria mucosa Véron et al. 1959 (Approved Lists 1980)

species: Neisseria mucosa


family: Not assigned to family

genus: Prevotella

species: Prevotella imum


description: domain/bacteria

family: Actinomycetaceae

full scientific name: Actinomyces oris Henssge et al. 2009

genus: Actinomyces

order: Actinomycetales

species: Actinomyces oris


genus: Prauserella

species: Prauserella kuwaitensis


description: domain/bacteria

full scientific name: Kingella kingae (Henriksen and Bøvre 1968) Henriksen and Bøvre 1976 (Approved Lists 1980)

genus: Kingella

species: Kingella kingae

synonym: Moraxella kingii


description: domain/bacteria

full scientific name: Acinetobacter schindleri Nemec et al. 2001

species: Acinetobacter schindleri


description: domain/bacteria

family: Comamonadaceae

full scientific name: Variovorax paradoxus (Davis 1969) Willems et al. 1991

genus: Variovorax

species: Variovorax paradoxus

synonym: Alcaligenes paradoxus


class: Alphaproteobacteria

description: domain/bacteria

family: Bartonellaceae

full scientific name: Phyllobacterium myrsinacearum (ex Knösel 1962) Knösel 1984

genus: Phyllobacterium

order: Hyphomicrobiales

species: Phyllobacterium myrsinacearum

synonym: Phyllobacterium rubiacearum

family: Phyllobacteriaceae


description: domain/bacteria

family: Cytobacillaceae

full scientific name: Robertmurraya korlensis (Zhang et al. 2009) Gupta et al. 2020

genus: Robertmurraya

species: Robertmurraya korlensis

synonym: Bacillus korlensis

family: Bacillaceae

genus: Bacillus

species: Bacillus korlensis


description: domain/bacteria

family: Aerococcaceae

full scientific name: Facklamia sourekii Collins et al. 1999

genus: Facklamia

species: Facklamia sourekii

synonym: Hutsoniella sourekii


description: domain/bacteria

family: Carnobacteriaceae

full scientific name: Dolosigranulum pigrum Aguirre et al. 1994

genus: Dolosigranulum

species: Dolosigranulum pigrum


description: domain/bacteria

full scientific name: Dolosicoccus paucivorans Collins et al. 1999

genus: Dolosicoccus

species: Dolosicoccus paucivorans


description: domain/bacteria

full scientific name: Ignavigranum ruoffiae Collins et al. 1999

genus: Ignavigranum

species: Ignavigranum ruoffiae


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus gallolyticus subsp. pasteurianus (Poyart et al. 2002) Schlegel et al. 2003

genus: Streptococcus

synonym: Streptococcus pasteurianus


description: domain/bacteria

family: Nocardiaceae

full scientific name: Rhodococcus erythropolis (Gray and Thornton 1928) Goodfellow and Alderson 1979 (Approved Lists 1980)

genus: Rhodococcus

species: Rhodococcus erythropolis

synonym: Arthrobacter picolinophilus

synonym: Rhodococcus qingshengii

synonym: Nocardia erythropolis

synonym: Rhodococcus enclensis

synonym: Mycobacterium erythropolis

synonym: Rhodococcus baikonurensis

synonym: Rhodococcus degradans

synonym: Nocardia calcarea

synonym: Rhodococcus jialingiae


description: domain/bacteria

full scientific name: Actinotignum schaalii (Lawson et al. 1997) Yassin et al. 2015

genus: Actinotignum

species: Actinotignum schaalii

synonym: Actinobaculum schaalii


description: domain/bacteria

family: Caryophanaceae

full scientific name: Lysinibacillus macroides (ex Bennett and Canale-Parola 1965) Coorevits et al. 2012

genus: Lysinibacillus

species: Lysinibacillus macroides


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Paenibacillus alvei (Cheshire and Cheyne 1885) Ash et al. 1994

genus: Paenibacillus

species: Paenibacillus alvei

synonym: Bacillus alvei


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas simiae Vela et al. 2006

genus: Pseudomonas

species: Pseudomonas simiae


description: domain/bacteria

family: Leptotrichiaceae

full scientific name: Sneathia sanguinegens Collins et al. 2002

genus: Sneathia

order: Fusobacteriales

species: Sneathia sanguinegens


description: domain/bacteria

full scientific name: Nocardia veterana Gürtler et al. 2001

genus: Nocardia

species: Nocardia veterana


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Franconibacter helveticus (Stephan et al. 2007) Stephan et al. 2014

genus: Franconibacter

species: Franconibacter helveticus

synonym: Enterobacter helveticus

synonym: Cronobacter helveticus


description: domain/bacteria

family: Moraxellaceae

full scientific name: Moraxella atlantae Bøvre et al. 1976 (Approved Lists 1980)

genus: Moraxella

species: Moraxella atlantae

synonym: Faucicola atlantae

description: ASM167906v1 assembly for Faucicola atlantae CCUG 66109


description: domain/bacteria

full scientific name: Brucella anthropi (Holmes et al. 1988) Hördt et al. 2020

genus: Brucella

species: Brucella anthropi

synonym: Ochrobactrum anthropi

family: Brucellaceae

genus: Ochrobactrum

species: Ochrobactrum anthropi


description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: Bifidobacterium mellis Olofsson et al. 2023

genus: Bifidobacterium

order: Bifidobacteriales

species: Bifidobacterium mellis

order: Not assigned to order


family: Not assigned to family

species: Bifidobacterium melliventris


description: domain/bacteria

family: Prevotellaceae

full scientific name: Prevotella nanceiensis Alauzet et al. 2007

genus: Prevotella

species: Prevotella nanceiensis

synonym: Hoylesella nanceiensis


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Capnocytophaga canimorsus Brenner et al. 1990

genus: Capnocytophaga

order: Flavobacteriales

species: Capnocytophaga canimorsus


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium diphtheriae (Kruse 1886) Lehmann and Neumann 1896 (Approved Lists 1980)

genus: Corynebacterium

species: Corynebacterium diphtheriae

synonym: Bacillus diphtheriae


description: domain/bacteria

family: Vibrionaceae

full scientific name: Vibrio cholerae Pacini 1854 (Approved Lists 1980)

genus: Vibrio

order: Vibrionales

species: Vibrio cholerae

synonym: Vibrio albensis


description: domain/bacteria

full scientific name: Acinetobacter pittii Nemec et al. 2011

genus: Acinetobacter

species: Acinetobacter pittii


description: domain/bacteria

family: Aerococcaceae

full scientific name: Aerococcus sanguinicola corrig. Lawson et al. 2001

genus: Aerococcus

species: Aerococcus sanguinicola

synonym: Aerococcus sanguicola


description: domain/bacteria

full scientific name: <I>Streptococcus</I> Rosenbach 1884 (Approved Lists 1980)

genus: Streptococcus

species: Streptococcus sp.

synonym: Okadaella


description: domain/bacteria

full scientific name: Corynebacterium mastitidis Fernández-Garayzábal et al. 1997

species: Corynebacterium mastitidis


description: domain/bacteria

full scientific name: Klebsiella pneumoniae (Schroeter 1886) Trevisan 1887 (Approved Lists 1980)

genus: Klebsiella

species: Klebsiella pneumoniae

synonym: Hyalococcus pneumoniae


description: domain/bacteria

full scientific name: Acinetobacter bereziniae Nemec et al. 2010

species: Acinetobacter bereziniae


description: domain/bacteria

family: Bartonellaceae

full scientific name: Phyllobacterium myrsinacearum (ex Knösel 1962) Knösel 1984

genus: Phyllobacterium

species: Phyllobacterium myrsinacearum

synonym: Phyllobacterium rubiacearum

family: Phyllobacteriaceae


description: domain/bacteria

family: Weeksellaceae

full scientific name: Bergeyella zoohelcum (Holmes et al. 1987) Vandamme et al. 1994

genus: Bergeyella

species: Bergeyella zoohelcum

synonym: Weeksella zoohelcum


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus mutans Clarke 1924 (Approved Lists 1980)

species: Streptococcus mutans


description: domain/bacteria

family: Rikenellaceae

full scientific name: Alistipes finegoldii Rautio et al. 2003

genus: Alistipes

species: Alistipes finegoldii


description: domain/bacteria

family: Bacillaceae

full scientific name: Fictibacillus nanhaiensis (Chen et al. 2011) Glaeser et al. 2013

genus: Fictibacillus

species: Fictibacillus nanhaiensis

synonym: Bacillus nanhaiensis


description: domain/bacteria

full scientific name: Eudoraea chungangensis Siamphan et al. 2015

genus: Eudoraea

species: Eudoraea chungangensis

description: ASM2936066v1 assembly for Eudoraea chungangensis KCTC 42048


description: domain/bacteria

full scientific name: Shouchella oshimensis (Yumoto et al. 2005) Joshi et al. 2022

genus: Shouchella

species: Shouchella oshimensis

synonym: Alkalihalobacillus plakortidis

synonym: Bacillus oshimensis

synonym: Alkalicoccobacillus plakortidis

synonym: Bacillus lehensis

synonym: Bacillus plakortidis

synonym: Alkalihalobacillus lehensis

synonym: Alkalihalobacillus oshimensis

synonym: Shouchella lehensis

synonym: Shouchella plakortidis

genus: Bacillus

species: Bacillus lehensis


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: <I>Pseudomonas</I> Migula 1894 (Approved Lists 1980)

genus: Pseudomonas

species: Pseudomonas sp.

synonym: Metapseudomonas

synonym: Zestomonas

synonym: Caenipseudomonas

synonym: Phytopseudomonas

synonym: Ectopseudomonas

synonym: Aquipseudomonas

synonym: Geopseudomonas

synonym: Flavimonas

synonym: Chryseomonas


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus cohnii Schleifer and Kloos 1975 (Approved Lists 1980)

genus: Staphylococcus

species: Staphylococcus cohnii


description: domain/bacteria

full scientific name: Brucella anthropi (Holmes et al. 1988) Hördt et al. 2020

genus: Brucella

species: Brucella anthropi

synonym: Ochrobactrum anthropi

genus: Ochrobactrum

species: Ochrobactrum anthropi


description: domain/bacteria

full scientific name: Corynebacterium ureicelerivorans Yassin 2007

genus: Corynebacterium

species: Corynebacterium ureicelerivorans


description: domain/bacteria

full scientific name: Prevotella oralis (Loesche et al. 1964) Shah and Collins 1990

genus: Prevotella

species: Prevotella oralis

synonym: Bacteroides oralis

synonym: Hoylesella oralis


description: domain/bacteria

family: Acetobacteraceae

full scientific name: Roseomonas mucosa Han et al. 2003

genus: Roseomonas

order: Rhodospirillales

species: Roseomonas mucosa


description: domain/bacteria

family: Moraxellaceae

full scientific name: Acinetobacter ursingii Nemec et al. 2001

genus: Acinetobacter

species: Acinetobacter ursingii

synonym: Acinetobacter septicus


description: domain/bacteria

full scientific name: Staphylococcus nepalensis Spergser et al. 2003

species: Staphylococcus nepalensis


culture collection no.: CCUG 66328 Q

description: domain/bacteria

family: Neisseriaceae

full scientific name: Neisseria perflava Bergey et al. 1923 (Approved Lists 1980)

genus: Neisseria

species: Neisseria perflava


description: domain/bacteria

full scientific name: Acinetobacter bereziniae Nemec et al. 2010

species: Acinetobacter bereziniae


description: domain/bacteria

family: Campylobacteraceae

full scientific name: Campylobacter iguaniorum Gilbert et al. 2015

genus: Campylobacter

species: Campylobacter iguaniorum


description: domain/bacteria

family: Yersiniaceae

full scientific name: Serratia marcescens Bizio 1823 (Approved Lists 1980)

genus: Serratia

species: Serratia marcescens

synonym: Serratia marcescens subsp. sakuensis


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Klebsiella michiganensis Saha et al. 2013

genus: Klebsiella

species: Klebsiella michiganensis


description: domain/bacteria

family: Erwiniaceae

full scientific name: Mixta gaviniae (Popp et al. 2010) Palmer et al. 2018

genus: Mixta

species: Mixta gaviniae

synonym: Pantoea gaviniae

genus: Pantoea

species: Pantoea gaviniae


description: domain/bacteria

full scientific name: Pantoea septica Brady et al. 2010

species: Pantoea septica


description: domain/bacteria

family: Actinomycetaceae

full scientific name: Actinomyces naeslundii corrig. Thompson and Lovestedt 1951 (Approved Lists 1980)

genus: Actinomyces

species: Actinomyces naeslundii

synonym: Actinomyces naeslundi


description: domain/bacteria

family: Alcaligenaceae

full scientific name: Achromobacter aegrifaciens Vandamme et al. 2014

genus: Achromobacter

species: Achromobacter aegrifaciens


description: domain/bacteria

family: Prevotellaceae

full scientific name: Prevotella nanceiensis Alauzet et al. 2007

species: Prevotella nanceiensis

synonym: Hoylesella nanceiensis


description: domain/bacteria

family: Arcobacteraceae

full scientific name: Arcobacter faecis Whiteduck-Léveillée et al. 2019

genus: Arcobacter

species: Arcobacter faecis

synonym: Aliarcobacter faecis

description: ASM1320170v1 assembly for Aliarcobacter faecis CCUG 66484

description: ASM2458413v1 assembly for Aliarcobacter faecis LMG 28519


description: domain/bacteria

full scientific name: Arcobacter lanthieri Whiteduck-Léveillée et al. 2015

species: Arcobacter lanthieri

synonym: Aliarcobacter lanthieri

description: ASM1320162v1 assembly for Aliarcobacter lanthieri LMG 28516

description: ASM2458409v1 assembly for Aliarcobacter lanthieri LMG 28516


description: domain/bacteria


description: domain/bacteria

full scientific name: Streptococcus cuniculipharyngis Vela et al. 2022

genus: Streptococcus

species: Streptococcus cuniculipharyngis

synonym: Streptococcus pharyngis

species: Streptococcus pharyngis

description: ASM785919v1 assembly for Streptococcus cuniculipharyngis CCUG 66496


description: domain/bacteria

full scientific name: Flaviflexus salsibiostraticola Jin et al. 2014

genus: Flaviflexus

species: Flaviflexus salsibiostraticola

description: Flaviflexus salsibiostraticola strain EBR4-1-2 16S ribosomal RNA gene, partial sequence

description: ASM395226v1 assembly for Flaviflexus salsibiostraticola KCTC 33148


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Haemophilus haemolyticus Bergey et al. 1923 (Approved Lists 1980)

genus: Haemophilus

order: Pasteurellales

species: Haemophilus haemolyticus


description: domain/bacteria

family: Weeksellaceae

full scientific name: Elizabethkingia miricola (Li et al. 2004) Kim et al. 2005

genus: Elizabethkingia

species: Elizabethkingia miricola

synonym: Chryseobacterium miricola

family: Flavobacteriaceae


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium saopaulense Nogueira et al. 2015

genus: Mycobacterium

order: Mycobacteriales

species: Mycobacterium saopaulense

synonym: Mycobacteroides saopaulense

description: Mycobacteroides saopaulense strain EPM10906 16S ribosomal RNA gene, partial sequence

description: ASM145635v1 assembly for Mycobacteroides saopaulense EPM10906

description: ASM208671v1 assembly for Mycobacteroides saopaulense CCUG 66554


description: domain/bacteria

description: ASM167949v1 assembly for Haemophilus sp. CCUG 66565


description: domain/bacteria

full scientific name: Prevotella oralis (Loesche et al. 1964) Shah and Collins 1990

genus: Prevotella

species: Prevotella oralis


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Stutzerimonas balearica (Bennasar et al. 1996) Lalucat et al. 2022

genus: Stutzerimonas

species: Stutzerimonas balearica

synonym: Pseudomonas balearica

genus: Pseudomonas

species: Pseudomonas balearica

description: ASM157503v2 assembly for Stutzerimonas balearica LS401


description: domain/bacteria

description: ASM157502v2 assembly for Stutzerimonas balearica st101


description: domain/bacteria

family: Porphyromonadaceae

full scientific name: Porphyromonas pasteri Sakamoto et al. 2015

genus: Porphyromonas

species: Porphyromonas pasteri

description: Porphyromonas pasteri gene for 16S ribosomal RNA, partial sequence

description: Porphyromonas pasteri strain JCM 30531 16S ribosomal RNA gene, partial sequence.

description: ASM1464775v1 assembly for Porphyromonas pasteri JCM 30531


description: domain/bacteria

full scientific name: Scandinavium goeteborgense Marathe et al. 2020

genus: Scandinavium

species: Scandinavium goeteborgense

genus: Buttiauxella

species: Buttiauxella sp.

description: Scandinavium goeteborgense strain CCUG 66741 16S ribosomal RNA gene, partial sequence.

description: ASM393589v2 assembly for Scandinavium goeteborgense CCUG 66741

description: Enterobacteriaceae bacterium CCUG 66741


description: domain/bacteria

full scientific name: Mycobacterium abscessus (Moore and Frerichs 1953) Kusunoki and Ezaki 1992

species: Mycobacterium abscessus

synonym: Mycobacterium chelonae subsp. abscessus

synonym: Mycobacterium abscessus

synonym: Mycobacteroides abscessus

synonym: Mycobacterium chelonei subsp. abscessus


description: domain/bacteria

family: Bacillaceae

full scientific name: Bacillus pumilus Meyer and Gottheil 1901 (Approved Lists 1980)

genus: Bacillus

species: Bacillus pumilus


description: domain/bacteria

family: Sphingomonadaceae

full scientific name: Sphingobium yanoikuyae (Yabuuchi et al. 1990) Takeuchi et al. 2001

genus: Sphingobium

order: Sphingomonadales

species: Sphingobium yanoikuyae

synonym: Sphingomonas yanoikuyae


culture collection no.: CCUG 67000 Q

description: domain/bacteria

full scientific name: <I>Pseudomonas</I> Migula 1894 (Approved Lists 1980)

species: Pseudomonas sp.

synonym: Metapseudomonas

synonym: Zestomonas

synonym: Caenipseudomonas

synonym: Phytopseudomonas

synonym: Ectopseudomonas

synonym: Aquipseudomonas

synonym: Geopseudomonas

synonym: Flavimonas

synonym: Chryseomonas


description: domain/bacteria

full scientific name: Mixta calida (Popp et al. 2010) Palmer et al. 2018

genus: Mixta

species: Mixta calida

synonym: Pantoea calida

genus: Pantoea

species: Pantoea calida


description: domain/bacteria

family: Bacteroidaceae

full scientific name: Bacteroides cellulosilyticus Robert et al. 2007

genus: Bacteroides

order: Bacteroidales

species: Bacteroides cellulosilyticus


class: Clostridia

description: domain/bacteria

family: Christensenellaceae

full scientific name: Catabacter hongkongensis Lau et al. 2014

genus: Catabacter

order: Eubacteriales

species: Catabacter hongkongensis

synonym: Catabacter hongkongensis

synonym: Christensenella hongkongensis

family: Catabacteriaceae


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus pettenkoferi Trülzsch et al. 2007

genus: Staphylococcus

order: Caryophanales

species: Staphylococcus pettenkoferi

synonym: Staphylococcus pettenkoferi


description: domain/bacteria

family: Aerococcaceae

full scientific name: Aerococcus sanguinicola corrig. Lawson et al. 2001

genus: Aerococcus

species: Aerococcus sanguinicola

synonym: Aerococcus sanguicola


description: domain/bacteria

family: Aeromonadaceae

full scientific name: Aeromonas sobria Popoff and Véron 1981

genus: Aeromonas

order: Aeromonadales

species: Aeromonas sobria


description: domain/bacteria

family: Clostridiaceae

full scientific name: Clostridium paraputrificum (Bienstock 1906) Snyder 1936 (Approved Lists 1980)

genus: Clostridium

species: Clostridium paraputrificum

synonym: Bacillus paraputrificus


description: domain/bacteria

full scientific name: Staphylococcus pseudintermedius Devriese et al. 2005

species: Staphylococcus pseudintermedius


description: domain/bacteria

family: Brevibacteriaceae

full scientific name: Brevibacterium luteolum corrig. Wauters et al. 2003

genus: Brevibacterium

order: Micrococcales

species: Brevibacterium luteolum

synonym: Brevibacterium lutescens


description: domain/bacteria

family: Actinomycetaceae

full scientific name: Pauljensenia hongkongensis (Woo et al. 2004) Nouioui et al. 2018

genus: Pauljensenia

species: Pauljensenia hongkongensis

synonym: Actinomyces hongkongensis


description: domain/bacteria

family: Veillonellaceae

full scientific name: Negativicoccus succinicivorans Marchandin et al. 2010

genus: Negativicoccus

order: Veillonellales

species: Negativicoccus succinicivorans


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

order: Enterobacterales

species: Escherichia coli

synonym: Bacillus coli


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus halichoeri subsp. hominis Shewmaker et al. 2025

genus: Streptococcus

order: Lactobacillales

species: Streptococcus halichoeri subsp. hominis

description: ASM987074v1 assembly for Streptococcus halichoeri CCUG67100


description: domain/bacteria

full scientific name: Virgibacillus halotolerans Seiler and Wenning 2013

genus: Virgibacillus

species: Virgibacillus halotolerans


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium kroppenstedtii Collins et al. 1998

genus: Corynebacterium

species: Corynebacterium kroppenstedtii

synonym: Corynebacterium parakroppenstedtii

synonym: Corynebacterium pseudokroppenstedtii


class: Bacteroidia

description: domain/bacteria

family: Tannerellaceae

full scientific name: Parabacteroides distasonis (Eggerth and Gagnon 1933) Sakamoto and Benno 2006

genus: Parabacteroides

species: Parabacteroides distasonis

synonym: Bacteroides distasonis


description: domain/bacteria

family: Erwiniaceae

full scientific name: Pantoea septica Brady et al. 2010

species: Pantoea septica


description: domain/bacteria

full scientific name: Facklamia hominis Collins et al. 1997

genus: Facklamia

species: Facklamia hominis


description: domain/bacteria

family: Propionibacteriaceae

full scientific name: Cutibacterium granulosum (Prévot 1938) Scholz and Kilian 2016

genus: Cutibacterium

order: Propionibacteriales

species: Cutibacterium granulosum

synonym: Propionibacterium granulosum

synonym: Corynebacterium granulosum


description: domain/bacteria

family: Prevotellaceae

full scientific name: Prevotella buccae (Holdeman et al. 1982) Shah and Collins 1990

genus: Prevotella

species: Prevotella buccae

synonym: Segatella buccae

synonym: Bacteroides pentosaceus

synonym: Bacteroides buccae

synonym: Bacteroides capillus


description: domain/bacteria

full scientific name: Parabacteroides gordonii Sakamoto et al. 2009

species: Parabacteroides gordonii


description: domain/bacteria

family: Cardiobacteriaceae

full scientific name: Cardiobacterium valvarum Han et al. 2004

genus: Cardiobacterium

order: Cardiobacteriales

species: Cardiobacterium valvarum


description: domain/bacteria

full scientific name: Streptococcus caprae Vela et al. 2016

species: Streptococcus caprae

description: Streptococcus caprae partial 16S rRNA gene, type strain DICM07-02790-1CT

description: ASM4264974v1 assembly for Streptococcus caprae CCUG 67170


description: domain/bacteria

description: P15-U63 assembly for Escherichia coli NCTC 13476

description: 33119_H01 assembly for Escherichia coli NCTC13476


description: domain/bacteria

family: Bacteroidaceae

full scientific name: Bacteroides uniformis Eggerth and Gagnon 1933 (Approved Lists 1980)

genus: Bacteroides

species: Bacteroides uniformis


description: domain/bacteria

family: Tissierellaceae

full scientific name: Tissierella praeacuta (Tissier 1908) Collins and Shah 1986

genus: Tissierella

order: Tissierellales

species: Tissierella praeacuta

synonym: Clostridium hastiforme

synonym: Coccobacillus praeacutus

synonym: Fusobacterium praeacutum

synonym: Bacteroides praeacutus

class: Tissierellia


description: domain/bacteria

family: Cytobacillaceae

full scientific name: Mesobacillus foraminis (Tiago et al. 2006) Patel and Gupta 2020

genus: Mesobacillus

species: Mesobacillus foraminis

synonym: Bacillus foraminis

family: Bacillaceae

genus: Bacillus

species: Bacillus foraminis


description: domain/bacteria

full scientific name: Phocaeicola dorei (Bakir et al. 2006) García-López et al. 2020

genus: Phocaeicola

species: Phocaeicola dorei

synonym: Bacteroides dorei

species: Bacteroides dorei


description: domain/bacteria

family: Moraxellaceae

full scientific name: Moraxella osloensis Bøvre and Henriksen 1967 (Approved Lists 1980)

genus: Moraxella

order: Pseudomonadales

species: Moraxella osloensis

synonym: Faucicola osloensis

description: ASM167927v1 assembly for Faucicola osloensis CCUG 67237


description: domain/bacteria

family: Desulfovibrionaceae

full scientific name: Desulfovibrio desulfuricans (Beijerinck 1895) Kluyver and van Niel 1936 (Approved Lists 1980)

genus: Desulfovibrio

order: Desulfovibrionales

species: Desulfovibrio desulfuricans

synonym: Spirillum desulfuricans


description: domain/bacteria

family: Rikenellaceae

full scientific name: Alistipes finegoldii Rautio et al. 2003

genus: Alistipes

species: Alistipes finegoldii


description: domain/bacteria

full scientific name: Acinetobacter albensis Krizova et al. 2015

genus: Acinetobacter

species: Acinetobacter albensis

description: Acinetobacter albensis strain ANC 4874 16S ribosomal RNA gene, partial sequence.

description: IMG-taxon 2671180230 annotated assembly for Acinetobacter albensis ANC 4874


description: domain/bacteria

family: Aeromonadaceae

full scientific name: Aeromonas hydrophila (Chester 1901) Stanier 1943 (Approved Lists 1980)

genus: Aeromonas

species: Aeromonas hydrophila

synonym: Pseudomonas hydrophila

synonym: Bacillus hydrophilus


culture collection no.: CCUG 67307 Q

description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus dispar Collins et al. 1991

genus: Enterococcus

species: Enterococcus dispar


description: domain/bacteria

family: Clostridiaceae

full scientific name: Clostridium sporogenes (Metchnikoff 1908) Bergey et al. 1923 (Approved Lists 1980)

genus: Clostridium

species: Clostridium sporogenes

synonym: Bacillus sporogenes


description: domain/bacteria

family: Caryophanaceae

full scientific name: Planococcus okeanokoites (ZoBell and Upham 1944) Nakagawa et al. 1996

genus: Planococcus

species: Planococcus okeanokoites

synonym: Flavobacterium okeanokoites

synonym: Planomicrobium okeanokoites

family: Planococcaceae

genus: Planomicrobium

species: Planomicrobium okeanokoites


culture collection no.: CCUG 67327 B

description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium thomssenii Zimmermann et al. 1998

genus: Corynebacterium

species: Corynebacterium thomssenii


culture collection no.: CCUG 67370 Q

description: domain/bacteria

family: Burkholderiaceae

full scientific name: Burkholderia cenocepacia Vandamme et al. 2003

genus: Burkholderia

order: Burkholderiales

species: Burkholderia cenocepacia


culture collection no.: CCUG 67382 Q

description: domain/bacteria

full scientific name: Sutcliffiella horikoshii (Nielsen et al. 1995) Gupta et al. 2020

genus: Sutcliffiella

species: Sutcliffiella horikoshii

synonym: Bacillus horikoshii

species: Bacillus horikoshii


culture collection no.: CCUG 67383 B

description: domain/bacteria

family: Porphyromonadaceae

full scientific name: Porphyromonas uenonis Finegold et al. 2005

genus: Porphyromonas

species: Porphyromonas uenonis


class: Flavobacteriia

description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Capnocytophaga canimorsus Brenner et al. 1990

genus: Capnocytophaga

order: Flavobacteriales

species: Capnocytophaga canimorsus


description: domain/bacteria

family: Erwiniaceae

full scientific name: Pantoea septica Brady et al. 2010

genus: Pantoea

species: Pantoea septica


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Phytobacter ursingii Pillonetto et al. 2018

genus: Phytobacter

species: Phytobacter ursingii


description: domain/bacteria

full scientific name: Pantoea agglomerans (Beijerinck 1888) Gavini et al. 1989

species: Pantoea agglomerans

synonym: Enterobacter agglomerans

synonym: Erwinia milletiae

synonym: Bacillus agglomerans

synonym: Bacillus milletiae

synonym: Erwinia herbicola

synonym: Bacterium herbicola


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Halopseudomonas gallaeciensis (Mulet et al. 2018) Rudra and Gupta 2021

genus: Halopseudomonas

species: Halopseudomonas gallaeciensis

synonym: Pseudomonas gallaeciensis

genus: Pseudomonas

species: Pseudomonas gallaeciensis


description: domain/bacteria

full scientific name: Mixta calida (Popp et al. 2010) Palmer et al. 2018

genus: Mixta

species: Mixta calida

synonym: Pantoea calida

species: Pantoea calida


description: domain/bacteria

full scientific name: Thiopseudomonas alkaliphila (Drobish et al. 2016) Rudra and Gupta 2021

genus: Thiopseudomonas

species: Thiopseudomonas alkaliphila

synonym: Oblitimonas alkaliphila

genus: Oblitimonas

species: Oblitimonas alkaliphila


culture collection no.: CCUG 67681 Q

description: domain/bacteria

family: Paenibacillaceae

full scientific name: Brevibacillus parabrevis (Takagi et al. 1993) Shida et al. 1996

genus: Brevibacillus

species: Brevibacillus parabrevis

synonym: Bacillus parabrevis


description: domain/bacteria

full scientific name: Corynebacterium ulcerans (ex Gilbert and Stewart 1927) Riegel et al. 1995

order: Mycobacteriales

species: Corynebacterium ulcerans

synonym: Corynebacterium ramonii


description: domain/bacteria

full scientific name: Acinetobacter haemolyticus (ex Stenzel and Mannheim 1963) Bouvet and Grimont 1986

genus: Acinetobacter

species: Acinetobacter haemolyticus


description: domain/bacteria

family: Aerococcaceae

full scientific name: Aerococcus sanguinicola corrig. Lawson et al. 2001

genus: Aerococcus

species: Aerococcus sanguinicola

synonym: Aerococcus sanguicola


description: domain/bacteria

family: Carnobacteriaceae

full scientific name: Carnobacterium divergens (Holzapfel and Gerber 1984) Collins et al. 1987

genus: Carnobacterium

species: Carnobacterium divergens

synonym: Lactobacillus divergens


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus pseudintermedius Devriese et al. 2005

genus: Staphylococcus

species: Staphylococcus pseudintermedius


family: Not assigned to family

genus: Facklamia

order: Not assigned to order

species: Facklamia porci


description: domain/bacteria

family: Actinomycetaceae

full scientific name: Actinomyces oris Henssge et al. 2009

genus: Actinomyces

order: Actinomycetales

species: Actinomyces oris


culture collection no.: CCUG 67839 Q

description: domain/bacteria

full scientific name: Burkholderia cenocepacia Vandamme et al. 2003

genus: Burkholderia

species: Burkholderia cenocepacia


culture collection no.: CCUG 67859 B

description: domain/bacteria


description: domain/bacteria

family: Weeksellaceae

full scientific name: Bergeyella porcorum Zamora et al. 2016

genus: Bergeyella

species: Bergeyella porcorum

description: Bergeyella porcorum strain CECT 9006 16S ribosomal RNA gene, partial sequence.

description: ASM4242757v1 assembly for Bergeyella porcorum CECT 9006


description: domain/bacteria


culture collection no.: CCUG 67940 Q

description: domain/bacteria

full scientific name: Paenibacillus barengoltzii Osman et al. 2006

genus: Paenibacillus

species: Paenibacillus barengoltzii


description: domain/bacteria

family: Moraxellaceae

full scientific name: Acinetobacter pseudolwoffii Nemec et al. 2019

species: Acinetobacter pseudolwoffii

description: Acinetobacter pseudolwoffii strain CCM 8638 16S ribosomal RNA gene, partial sequence.

description: ASM4264798v1 assembly for Acinetobacter pseudolwoffii CCM 8638

description: ASM4265100v1 assembly for Acinetobacter pseudolwoffii CCM 8638

description: ASM280360v1 assembly for Acinetobacter pseudolwoffii ANC 5044


description: domain/bacteria

family: Caryophanaceae

full scientific name: Lysinibacillus macroides (ex Bennett and Canale-Parola 1965) Coorevits et al. 2012

genus: Lysinibacillus

species: Lysinibacillus macroides

family: Bacillaceae


description: domain/bacteria

species: Mixta calida

genus: Pantoea


description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: Alloscardovia omnicolens Huys et al. 2007

genus: Alloscardovia

order: Bifidobacteriales

species: Alloscardovia omnicolens


culture collection no.: CCUG 68097 Q

description: domain/bacteria

full scientific name: Sutcliffiella horikoshii (Nielsen et al. 1995) Gupta et al. 2020

genus: Sutcliffiella

order: Caryophanales

species: Sutcliffiella horikoshii

genus: Bacillus

species: Bacillus horikoshii


culture collection no.: CCUG 68098 Q

description: domain/bacteria

family: Micrococcaceae

full scientific name: Arthrobacter subterraneus Chang et al. 2008

genus: Arthrobacter

species: Arthrobacter subterraneus


description: domain/bacteria

family: Thermoactinomycetaceae

full scientific name: Kroppenstedtia sanguinis Bell et al. 2016

genus: Kroppenstedtia

species: Kroppenstedtia sanguinis


description: domain/bacteria

full scientific name: Acinetobacter baumannii Bouvet and Grimont 1986

species: Acinetobacter baumannii


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Limosilactobacillus vaginalis (Embley et al. 1989) Zheng et al. 2020

genus: Limosilactobacillus

species: Limosilactobacillus vaginalis

synonym: Lactobacillus vaginalis

genus: Lactobacillus

species: Lactobacillus vaginalis


description: domain/bacteria

full scientific name: Dolosigranulum pigrum Aguirre et al. 1994

genus: Dolosigranulum

species: Dolosigranulum pigrum


description: domain/bacteria

full scientific name: Aerococcus viridans Williams et al. 1953 (Approved Lists 1980)

genus: Aerococcus

species: Aerococcus viridans


culture collection no.: CCUG 68249 Q

description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: Pseudonocardia kongjuensis Lee et al. 2001

genus: Pseudonocardia

order: Pseudonocardiales

species: Pseudonocardia kongjuensis


description: domain/bacteria

full scientific name: Actinobaculum massiliense corrig. Greub and Raoult 2002

genus: Actinobaculum

species: Actinobaculum massiliense

synonym: Actinobaculum massiliae


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium appendicis Yassin et al. 2002

genus: Corynebacterium

species: Corynebacterium appendicis


description: domain/bacteria

family: Christensenellaceae

full scientific name: Catabacter hongkongensis Lau et al. 2014

genus: Catabacter

order: Eubacteriales

species: Catabacter hongkongensis

synonym: Catabacter hongkongensis

synonym: Christensenella hongkongensis

family: Catabacteriaceae


description: domain/bacteria

family: Prevotellaceae

full scientific name: Prevotella disiens (Holdeman and Johnson 1977) Shah and Collins 1990

genus: Prevotella

order: Bacteroidales

species: Prevotella disiens

synonym: Bacteroides disiens


description: domain/bacteria

family: Odoribacteraceae

full scientific name: Odoribacter splanchnicus (Werner et al. 1975) Hardham et al. 2008

genus: Odoribacter

species: Odoribacter splanchnicus

synonym: Bacteroides splanchnicus

family: Marinifilaceae


description: domain/bacteria

full scientific name: Ligilactobacillus animalis (Dent and Williams 1983) Zheng et al. 2020

genus: Ligilactobacillus

species: Ligilactobacillus animalis

synonym: Lactobacillus animalis

species: Lactobacillus animalis


description: domain/bacteria

full scientific name: Limosilactobacillus fermentum (Beijerinck 1901) Zheng et al. 2020

species: Limosilactobacillus fermentum

synonym: Lactobacillus fermentum

synonym: Lactobacillus cellobiosus

species: Lactobacillus fermentum


description: domain/bacteria

full scientific name: Actinomyces oris Henssge et al. 2009

genus: Actinomyces

species: Actinomyces oris


description: domain/bacteria

family: Gordoniaceae

full scientific name: Gordonia bronchialis corrig. (Tsukamura 1971) Stackebrandt et al. 1989

genus: Gordonia

species: Gordonia bronchialis

synonym: Rhodococcus bronchialis

synonym: Gordona bronchialis


Matching level: strain

description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Enterobacter soli Manter et al. 2011

genus: Enterobacter

order: Enterobacterales

species: Enterobacter soli

description: Enterobacter soli strain LMG 25861 16S ribosomal RNA gene, partial sequence.

description: Enterobacter soli ATCC BAA-2102 16S ribosomal RNA gene, partial sequence.

description: EsoBAA2102_DRAFTv1 assembly for Enterobacter soli ATCC BAA-2102


description: domain/bacteria

family: Weeksellaceae

full scientific name: Chryseobacterium arthrosphaerae Kämpfer et al. 2010

genus: Chryseobacterium

species: Chryseobacterium arthrosphaerae

family: Flavobacteriaceae


family: Not assigned to family

genus: Clostridium

species: Clostridium novel


description: domain/bacteria

full scientific name: <I>Prevotella</I> Shah and Collins 1990

species: Prevotella sp.

synonym: Leyella

synonym: Hoylesella

synonym: Xylanibacter

synonym: Segatella


description: domain/bacteria

family: Veillonellaceae

full scientific name: Dialister pneumosintes (Olitsky and Gates 1921) Moore and Moore 1994

genus: Dialister

order: Veillonellales

species: Dialister pneumosintes

synonym: Bacteroides pneumosintes

synonym: Bacterium pneumosintes


description: domain/bacteria

family: Bacteroidaceae

full scientific name: <I>Bacteroides</I> Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Bacteroides

species: Bacteroides sp.

synonym: Capsularis


description: domain/bacteria

family: Selenomonadaceae

full scientific name: <I>Mitsuokella</I> Shah and Collins 1983

genus: Mitsuokella

order: Selenomonadales

species: Mitsuokella sp.


genus: Butyricicoccus

species: Butyricicoccus novel


description: domain/bacteria

family: Tannerellaceae

full scientific name: Parabacteroides distasonis (Eggerth and Gagnon 1933) Sakamoto and Benno 2006

genus: Parabacteroides

species: Parabacteroides distasonis

synonym: Bacteroides distasonis


description: domain/bacteria

full scientific name: Corynebacterium mycetoides (ex Castellani 1942) Collins 1983

species: Corynebacterium mycetoides


description: domain/bacteria

family: Tissierellaceae

full scientific name: Tissierella praeacuta (Tissier 1908) Collins and Shah 1986

genus: Tissierella

species: Tissierella praeacuta

synonym: Clostridium hastiforme

synonym: Coccobacillus praeacutus

synonym: Fusobacterium praeacutum

synonym: Bacteroides praeacutus


description: domain/bacteria

full scientific name: Bacteroides finegoldii Bakir et al. 2006

species: Bacteroides finegoldii


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Lachnospira pectinoschiza Cornick et al. 1994

genus: Lachnospira

species: Lachnospira pectinoschiza


description: domain/bacteria

family: Clostridiaceae

full scientific name: Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014

genus: Hungatella

species: Hungatella hathewayi

synonym: Clostridium hathewayi


description: domain/bacteria

family: Campylobacteraceae

full scientific name: Campylobacter pinnipediorum subsp. caledonicus Gilbert et al. 2017

genus: Campylobacter

order: Campylobacterales

description: ASM202198v1 assembly for Campylobacter pinnipediorum subsp. caledonicus M302/10/6


description: domain/bacteria

full scientific name: <I>Parabacteroides</I> Sakamoto and Benno 2006

species: Parabacteroides sp.


description: domain/bacteria

full scientific name: Phocaeicola vulgatus (Eggerth and Gagnon 1933) García-López et al. 2020

genus: Phocaeicola

species: Phocaeicola vulgatus

synonym: Bacteroides vulgatus

species: Bacteroides vulgatus


description: domain/bacteria

full scientific name: Bacteroides thetaiotaomicron (Distaso 1912) Castellani and Chalmers 1919 (Approved Lists 1980)

species: Bacteroides thetaiotaomicron

synonym: Bacteroides fragilis subsp. thetaiotaomicron

synonym: Bacillus thetaiotaomicron


description: domain/bacteria

family: Micrococcaceae

full scientific name: Micrococcus lylae Kloos et al. 1974 (Approved Lists 1980)

genus: Micrococcus

order: Micrococcales

species: Micrococcus lylae


description: domain/bacteria

full scientific name: Klebsiella pneumoniae (Schroeter 1886) Trevisan 1887 (Approved Lists 1980)

genus: Klebsiella

species: Klebsiella pneumoniae

synonym: Hyalococcus pneumoniae

description: Klebsiella pneumoniae strain NCTC 13442 16S ribosomal RNA gene, partial sequence.

description: P13-U61 assembly for Klebsiella pneumoniae NCTC 13442

description: 32512_G01 assembly for Klebsiella pneumoniae NCTC13442


description: domain/bacteria

description: 32868_D02 assembly for Klebsiella pneumoniae NCTC13443


description: domain/bacteria

family: Kytococcaceae

full scientific name: Kytococcus sedentarius (ZoBell and Upham 1944) Stackebrandt et al. 1995

genus: Kytococcus

species: Kytococcus sedentarius

synonym: Micrococcus sedentarius


description: domain/bacteria

family: Erwiniaceae

full scientific name: Mixta calida (Popp et al. 2010) Palmer et al. 2018

genus: Mixta

species: Mixta calida

synonym: Pantoea calida

genus: Pantoea

species: Pantoea calida


culture collection no.: CCUG 68825 Q

class: Deinococci

description: domain/bacteria

family: Deinococcaceae

full scientific name: Deinococcus proteolyticus (ex Kobatake et al. 1973) Brooks and Murray 1981

genus: Deinococcus

keyword: phylum/deinococcota

order: Deinococcales

phylum: Deinococcota

species: Deinococcus proteolyticus

phylum: Deinococcus-Thermus


description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus saigonensis Harada et al. 2016

genus: Enterococcus

order: Lactobacillales

species: Enterococcus saigonensis

description: Enterococcus saigonensis gene for 16S ribosomal RNA, partial sequence, strain: VE116


description: domain/bacteria

family: Actinomycetaceae

full scientific name: Actinomyces oris Henssge et al. 2009

genus: Actinomyces

species: Actinomyces oris


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus mutans Clarke 1924 (Approved Lists 1980)

genus: Streptococcus

species: Streptococcus mutans


description: domain/bacteria

family: Helicobacteraceae

full scientific name: <I>Helicobacter</I> Goodwin et al. 1989

genus: Helicobacter

species: Helicobacter sp.

synonym: Pseudohelicobacter

full scientific name: Helicobacter sp.

description: Helicobacter sp. TUL 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Weeksellaceae

full scientific name: Chryseobacterium taklimakanense (Peng et al. 2009) Holmes et al. 2013

genus: Chryseobacterium

species: Chryseobacterium taklimakanense

synonym: Planobacterium taklimakanense

family: Flavobacteriaceae


description: domain/bacteria

family: Cytobacillaceae

full scientific name: Robertmurraya korlensis (Zhang et al. 2009) Gupta et al. 2020

genus: Robertmurraya

species: Robertmurraya korlensis

synonym: Bacillus korlensis

family: Bacillaceae

genus: Bacillus

species: Bacillus korlensis


culture collection no.: CCUG 69059 Q

description: domain/bacteria

family: Neisseriaceae

full scientific name: Neisseria perflava Bergey et al. 1923 (Approved Lists 1980)

genus: Neisseria

order: Neisseriales

species: Neisseria perflava


description: domain/bacteria

full scientific name: Chryseobacterium oranimense Hantsis-Zacharov et al. 2008

order: Flavobacteriales

species: Chryseobacterium oranimense


description: domain/bacteria

family: Yersiniaceae

full scientific name: Rouxiella chamberiensis Le Flèche-Matéos et al. 2015

genus: Rouxiella

species: Rouxiella chamberiensis


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Mediterraneibacter gnavus (Moore et al. 1976) Togo et al. 2023

genus: Mediterraneibacter

species: Mediterraneibacter gnavus

synonym: Ruminococcus gnavus

family: Ruminococcaceae

genus: Ruminococcus

species: Ruminococcus gnavus


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas taetrolens Haynes 1957 (Approved Lists 1980)

genus: Pseudomonas

order: Pseudomonadales

species: Pseudomonas taetrolens


description: domain/bacteria

family: Acetobacteraceae

full scientific name: Roseomonas mucosa Han et al. 2003

genus: Roseomonas

order: Rhodospirillales

species: Roseomonas mucosa