description: domain/bacteria

full scientific name: Aequorivita vladivostokensis (Nedashkovskaya et al. 2003) Hahnke et al. 2017

species: Aequorivita vladivostokensis

synonym: Vitellibacter vladivostokensis

description: Vitellibacter vladivostokensis gene for 16S rRNA, partial sequence, strain: NBRC 16718.

description: ASM95285v1 assembly for Aequorivita vladivostokensis KMM 3516


Matching level: species

class: Gammaproteobacteria

description: domain/bacteria

domain: Bacteria

family: Enterobacteriaceae

full scientific name: Klebsiella aerogenes (Hormaeche and Edwards 1960) Tindall et al. 2017

genus: Klebsiella

keyword: phylum/pseudomonadota

order: Enterobacterales

phylum: Pseudomonadota

species: Klebsiella aerogenes

synonym: Klebsiella mobilis

synonym: Enterobacter aerogenes

phylum: Proteobacteria

type strain: no


class: Flavobacteriia

description: domain/bacteria

family: Flavobacteriaceae

full scientific name: <I>Aequorivita</I> Bowman and Nichols 2002

genus: Aequorivita

keyword: phylum/bacteroidota

order: Flavobacteriales

phylum: Bacteroidota

species: Aequorivita sp.

synonym: Vitellibacter

phylum: Bacteroidetes

assembly level: scaffold

description: Aequorivita CIP111184 annotated assembly for Aequorivita sp. CIP111184


description: domain/bacteria

family: Yersiniaceae

full scientific name: Serratia ureilytica Bhadra et al. 2005

genus: Serratia

species: Serratia ureilytica


description: domain/bacteria

full scientific name: Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987

genus: Salmonella

species: Salmonella enterica

synonym: Bacillus typhimurium

synonym: Bacillus enteritidis

synonym: Salmonella enteritidis

synonym: Salmonella paratyphi

synonym: Salmonella typhi

synonym: Salmonella typhimurium

synonym: Bacillus typhi

synonym: Bacillus choleraesuis

synonym: Salmonella choleraesuis

assembly level: complete

description: ASM48729v3 assembly for Salmonella enterica subsp. enterica serovar Choleraesuis str. ATCC 10708

description: ATCC_10708__202309 assembly for Salmonella enterica ETS 34

description: Salmonella enterica enterica sv. Choleraesuis ATCC 10708


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Aggregatibacter aphrophilus (Khairat 1940) Nørskov-Lauritsen and Kilian 2006

genus: Aggregatibacter

order: Pasteurellales

species: Aggregatibacter aphrophilus

synonym: Haemophilus paraphrophilus

synonym: Haemophilus aphrophilus


description: domain/bacteria

full scientific name: Aggregatibacter actinomycetemcomitans (Klinger 1912) Nørskov-Lauritsen and Kilian 2006

species: Aggregatibacter actinomycetemcomitans

synonym: Actinobacillus actinomycetemcomitans

synonym: Bacterium actinomycetemcomitans

synonym: Haemophilus actinomycetemcomitans


description: domain/bacteria

full scientific name: Shigella sonnei (Levine 1920) Weldin 1927 (Approved Lists 1980)

genus: Shigella

species: Shigella sonnei

synonym: Bacterium sonnei


description: domain/bacteria

full scientific name: Serratia marcescens Bizio 1823 (Approved Lists 1980)

species: Serratia marcescens

synonym: Serratia marcescens subsp. sakuensis


description: domain/bacteria

family: Vibrionaceae

full scientific name: Vibrio vulnificus (Reichelt et al. 1979) Farmer 1980

genus: Vibrio

order: Vibrionales

species: Vibrio vulnificus

synonym: Beneckea vulnifica


class: Bacilli

description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus dysgalactiae (ex Diernhofer 1932) Garvie et al. 1983

genus: Streptococcus

keyword: phylum/bacillota

order: Lactobacillales

phylum: Bacillota

species: Streptococcus dysgalactiae

phylum: Firmicutes

strain designation: C2, Austin

description: 41825_F01 assembly for Streptococcus dysgalactiae subsp. equisimilis NCTC8546


Matching level: subspecies

description: domain/bacteria

family: Aeromonadaceae

full scientific name: Aeromonas hydrophila subsp. hydrophila (Chester 1901) Schubert 1964 (Approved Lists 1980)

genus: Aeromonas

order: Aeromonadales

species: Aeromonas hydrophila subsp. hydrophila

full scientific name: Aeromonas hydrophila subsp. hydrophila (Chester 1901) Schubert 1964 emend. Huys et al. 2002


class: Actinomycetes

description: domain/bacteria

family: Micrococcaceae

full scientific name: <I>Arthrobacter</I> Conn and Dimmick 1947 (Approved Lists 1980)

genus: Arthrobacter

keyword: phylum/actinomycetota

order: Micrococcales

phylum: Actinomycetota

species: Arthrobacter sp.

synonym: Crystallibacter

class: Actinobacteria

full scientific name: Arthrobacter sp.

order: Actinomycetales

phylum: Actinobacteria


class: Alphaproteobacteria

description: domain/bacteria

family: Azospirillaceae

full scientific name: <I>Azospirillum</I> Tarrand et al. 1979 (Approved Lists 1980)

genus: Azospirillum

order: Rhodospirillales

species: Azospirillum sp.

synonym: Conglomeromonas

full scientific name: Azospirillum sp.

database: nuccore

description: Candidatus Azospirillum massiliensis strain URAM1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Bacillaceae

full scientific name: Bacillus cereus Frankland and Frankland 1887 (Approved Lists 1980)

genus: Bacillus

order: Caryophanales

species: Bacillus cereus

order: Bacillales


description: domain/bacteria

full scientific name: Bacillus cereus Frankland and Frankland 1887


description: domain/bacteria

full scientific name: Bacillus circulans Jordan 1890 (Approved Lists 1980)

species: Bacillus circulans

synonym: Niallia circulans

full scientific name: Niallia circulans (Jordan 1890) Gupta et al. 2020

genus: Niallia

species: Niallia circulans


description: domain/bacteria

full scientific name: Bacillus pumilus Meyer and Gottheil 1901 (Approved Lists 1980)

species: Bacillus pumilus


description: domain/bacteria

full scientific name: <I>Bacillus</I> Cohn 1872 (Approved Lists 1980)

species: Bacillus sp.

synonym: Quasibacillus

synonym: Weizmannia

synonym: Maribacillus

synonym: Niallia

full scientific name: Bacillus sp.


description: domain/bacteria

description: Bacillus baekryungensis 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Bacillus sp. BH052 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Bacillus sp. BH164 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Halobacillus sp. BH178 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Bacillus granadensis strain N30135 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Bacillaceae bacterium 20-5 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Bacillus sp. NHTS-47 partial 16S rRNA gene, strain NHTS-47


description: domain/bacteria

description: Bacillus sp. S3-R6TC-BA1 clone 6 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Bacillus thuringiensis Berliner 1915 (Approved Lists 1980)

species: Bacillus thuringiensis

full scientific name: Bacillus thuringiensis Berliner 1915


description: domain/bacteria

family: Brevibacteriaceae

full scientific name: <I>Brevibacterium</I> Breed 1953 (Approved Lists 1980)

genus: Brevibacterium

species: Brevibacterium sp.

full scientific name: Brevibacterium sp.


description: domain/bacteria

genus: Myroides

species: Myroides odoratus

synonym: Flavobacterium odoratum

full scientific name: Myroides odoratus (Stutzer 1929) Vancanneyt et al. 1996 emend. Hahnke et al. 2016


description: domain/bacteria

full scientific name: Myroides odoratus (Stutzer 1929) Vancanneyt et al. 1996


description: domain/bacteria

description: Myroides odoratus DSM 2801 strain ATCC 4651 16S ribosomal RNA, partial sequence


description: domain/bacteria

full scientific name: <I>Flavobacterium</I> Bergey et al. 1923 (Approved Lists 1980)

genus: Flavobacterium

species: Flavobacterium sp.

full scientific name: Flavobacterium sp.

description: Flavobacterium sp. YC6718 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Flavobacterium sp. S6-2b 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Flavobacterium sp. CGMCC 1.09702 16S ribosomal RNA gene, partial sequence


class: Clostridia

description: domain/bacteria

family: Clostridiaceae

full scientific name: Clostridium ramosum (Veillon and Zuber 1898) Holdeman et al. 1971 (Approved Lists 1980)

genus: Clostridium

order: Eubacteriales

species: Clostridium ramosum

synonym: Thomasclavelia ramosa

synonym: Erysipelatoclostridium ramosum

synonym: Bacillus ramosus

class: Erysipelotrichia

family: Coprobacillaceae

full scientific name: Thomasclavelia  ramosa

genus: Thomasclavelia

order: Erysipelotrichales

species: Thomasclavelia ramosa

description: ASM2009725v1 assembly for Thomasclavelia ramosa FDAARGOS_1519

description: Erysipelatoclostridium ramosum strain FDAARGOS_1519


description: domain/bacteria

full scientific name: <I>Clostridium</I> Prazmowski 1880 (Approved Lists 1980)

species: Clostridium sp.

synonym: Pseudoclostridium

synonym: Lachnoclostridium

synonym: Anaerobacter

synonym: Inflabilis

synonym: Thomasclavelia

synonym: Erysipelatoclostridium

full scientific name: Clostridium sp.

order: Anaeroplasmatales

description: Clostridium sp. U42 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: IMG-taxon 2671180031 annotated assembly for Clostridium sp. USBA 49


description: domain/bacteria


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium phoceense Cresci et al. 2016

genus: Corynebacterium

order: Mycobacteriales

species: Corynebacterium phoceense

description: Corynebacterium sp. MC1 partial 16S rRNA gene, strain MC1

description: PRJEB14666 assembly for Corynebacterium phoceense MC1


culture collection no.: DSM 103271, Marseille-P2948, CSUR P2948

description: domain/bacteria

full scientific name: Corynebacterium fournieri corrig. Diop et al. 2018

species: Corynebacterium fournieri

synonym: Corynebacterium fournierii

full scientific name: Corynebacterium fournieri Diop et al. 2018

type strain: yes

description: Corynebacterium sp. Marseille-P2948 partial 16S rRNA gene, strain Marseille-P2948

description: PRJEB20393 assembly for Corynebacterium fournieri Marseille-P2948

description: ASM3040877v1 assembly for Corynebacterium fournieri DSM 103271


description: domain/bacteria

full scientific name: Corynebacterium gottingense Atasayar et al. 2017

species: Corynebacterium gottingense

synonym: Corynebacterium godavarianum

synonym: Corynebacterium hadale

description: Corynebacterium gottingense strain 99221/2016 16S ribosomal RNA gene, partial sequence

description: Corynebacterium gottingense strain DSM 103494 16S ribosomal RNA gene, partial sequence.

assembly level: contig

description: ASM369326v1 assembly for Corynebacterium gottingense DSM 103494


class: Cytophagia

description: domain/bacteria

family: Cytophagaceae

full scientific name: <I>Cytophaga</I> Winogradsky 1929 (Approved Lists 1980)

genus: Cytophaga

order: Cytophagales

species: Cytophaga sp.

full scientific name: Cytophaga sp.

description: Candidatus Cytophaga massiliensis strain URCM1 16S ribosomal RNA gene, partial sequence


class: Desulfovibrionia

description: domain/bacteria

family: Desulfovibrionaceae

full scientific name: <I>Desulfovibrio</I> Kluyver and van Niel 1936 (Approved Lists 1980)

genus: Desulfovibrio

keyword: phylum/thermodesulfobacteriota

order: Desulfovibrionales

phylum: Thermodesulfobacteriota

species: Desulfovibrio sp.

synonym: Desulfomonas

synonym: Aminidesulfovibrio

synonym: Psychrodesulfovibrio

synonym: Frigididesulfovibrio

synonym: Alteridesulfovibrio

class: Deltaproteobacteria

full scientific name: Desulfovibrio sp.

description: Desulfovibrio sp. ds2-2 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

order: Enterobacterales

species: Escherichia coli

synonym: Bacillus coli

order: Enterobacteriales, not validated

strain designation: K-12 CL83 (JM83-recA56) with plasmid pCL1920


description: domain/bacteria

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919

description: ASM75055v1 assembly for Escherichia coli BW25113 K-12 substr. BW25113

description: assembly1 assembly for Escherichia coli


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lactiplantibacillus plantarum subsp. plantarum (Orla-Jensen 1919) Zheng et al. 2020

genus: Lactiplantibacillus

synonym: Lactobacillus plantarum subsp. plantarum


description: domain/bacteria

species: Lactiplantibacillus plantarum subsp. plantarum


description: domain/bacteria

full scientific name: <I>Lactobacillus</I> Beijerinck 1901 (Approved Lists 1980)

genus: Lactobacillus

species: Lactobacillus sp.

full scientific name: Lactobacillus sp.


description: domain/bacteria

family: Oscillospiraceae

full scientific name: Faecalibacterium langellae Plomp and Harmsen 2024

genus: Faecalibacterium

species: Faecalibacterium langellae

description: Lactobacillus mobilis gene for 16S rRNA, partial sequence


description: domain/bacteria

strain designation: DI 71

description: Lactobacillus sp. DI71 gene for 16S ribosomal RNA, partial sequence


class: Not assigned to order

family: Not assigned to family

full scientific name: unclassified bacterium

genus: unclassified

order: Clostridiales

phylum: Not assigned to order

species: unclassified bacterium


description: domain/bacteria

family: Promicromonosporaceae

full scientific name: <I>Cellulosimicrobium</I> Schumann et al. 2001

genus: Cellulosimicrobium

species: Cellulosimicrobium sp.

full scientific name: Cellulosimicrobium sp.


description: Chryseobacterium sp. WR21 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Bartonellaceae

full scientific name: <I>Aliihoeflea</I> Roh et al. 2025

genus: Aliihoeflea

order: Hyphomicrobiales

species: Aliihoeflea sp.

family: Phyllobacteriaceae

full scientific name: Aliihoeflea sp.

description: Aliihoeflea aestuarii partial 16S rRNA gene, isolate 2WW

description: Alii2WW1 assembly for Aliihoeflea sp. 2WW


class: Betaproteobacteria

description: domain/bacteria

family: Neisseriaceae

full scientific name: Neisseria zalophi Volokhov et al. 2018

genus: Neisseria

order: Neisseriales

species: Neisseria zalophi

description: Neisseria zalophi 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence

description: ASM880701v1 assembly for Neisseria zalophi ATCC BAA-2455


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Burkholderia puraquae Martina et al. 2018

genus: Burkholderia

order: Burkholderiales

species: Burkholderia puraquae

strain designation: HST 245

description: Burkholderia puraquae strain CAMPA 1040 16S ribosomal RNA gene, partial sequence

description: LMG 29660 assembly for Burkholderia puraquae LMG 29660

description: ASM209919v1 assembly for Burkholderia puraquae CAMPA 1040


description: domain/bacteria

family: Comamonadaceae

full scientific name: Lampropedia puyangensis Li et al. 2015

genus: Lampropedia

species: Lampropedia puyangensis

description: Lampropedia puyangensis strain 2-bin 16S ribosomal RNA gene, partial sequence

description: ASM483328v1 assembly for Lampropedia puyangensis 2-bin


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Catenibacillus scindens Braune and Blaut 2018

genus: Catenibacillus

species: Catenibacillus scindens

description: Intestinal bacterium CG19-1 16S ribosomal RNA gene, partial sequence

description: ASM1420211v1 assembly for Catenibacillus scindens DSM 106146


description: domain/bacteria

family: Methylobacteriaceae

full scientific name: <I>Methylobacterium</I> Patt et al. 1976 (Approved Lists 1980)

genus: Methylobacterium

species: Methylobacterium sp.

full scientific name: Methylobacterium sp.

order: Rhizobiales


description: domain/bacteria

description: Methylobacterium sp. 92d gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Methylobacterium sp. z92a gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Leaf399 assembly for Methylobacterium sp. Leaf399


description: domain/bacteria

family: Micrococcaceae

full scientific name: <I>Micrococcus</I> Cohn 1872 (Approved Lists 1980)

genus: Micrococcus

order: Micrococcales

species: Micrococcus sp.

full scientific name: Micrococcus sp.

order: Actinomycetales


description: domain/bacteria

description: Uncultured Micrococcus sp. partial 16S rRNA gene, isolate LTB-37


Matching level: strain

class: Bacteroidia

description: domain/bacteria

family: Prevotellaceae

genus: Prevotella

order: Bacteroidales

species: Prevotella dentalis

synonym: Mitsuokella dentalis

full scientific name: Prevotella dentalis (Haapasalo et al. 1986) Willems and Collins 1995 emend. Hahnke et al. 2016

description: P.dentalis 16S rRNA gene

description: Prevotella dentalis DSM 3688 16S ribosomal RNA, partial sequence

description: Prevotella dentalis gene for 16S ribosomal RNA, partial sequence, strain: JCM 13448

description: Prevotella dentalis DSM 3688 16S ribosomal RNA gene, partial sequence.

description: ASM24233v3 assembly for Prevotella dentalis DSM 3688

description: ASM22021v1 assembly for Prevotella dentalis DSM 3688

description: Prevotella dentalis DSM 3688


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium icosiumassiliensis Djouadi et al. 2016

genus: Mycobacterium

species: Mycobacterium icosiumassiliensis

synonym: Mycolicibacter icosiumassiliensis


description: domain/bacteria

family: Nocardiaceae

full scientific name: <I>Nocardia</I> Trevisan 1889 (Approved Lists 1980)

genus: Nocardia

species: Nocardia sp.

synonym: Micropolyspora

full scientific name: Nocardia sp.

description: Nocardia sp. YIM 65645 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Paracoccaceae

full scientific name: Paracoccus denitrificans (Beijerinck and Minkman 1910) Davis 1969 (Approved Lists 1980)

genus: Paracoccus

order: Rhodobacterales

species: Paracoccus denitrificans

synonym: Micrococcus denitrificans

family: Rhodobacteraceae

full scientific name: Paracoccus denitrificans (Beijerinck and Minkman 1910) Davis 1969 emend. Rainey et al. 1999

order: Not assigned to order

description: ASM20389v1 assembly for Paracoccus denitrificans PD1222

description: ASM1419971v1 assembly for Paracoccus denitrificans DSM 104981


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Pediococcus acidilactici Lindner 1887 (Approved Lists 1980)

genus: Pediococcus

order: Lactobacillales

species: Pediococcus acidilactici

synonym: Pediococcus lolii

full scientific name: Pediococcus acidilactici Lindner 1887 emend. Judicial Commission 1996

description: ASM16309v1 assembly for Pediococcus acidilactici 7_4


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)

genus: Pseudomonas

order: Pseudomonadales

species: Pseudomonas aeruginosa

synonym: Pseudomonas paraeruginosa

synonym: Bacterium aeruginosum

strain designation: NN2, clone C40A


description: domain/bacteria

full scientific name: Pseudomonas fluorescens Migula 1895 (Approved Lists 1980)

species: Pseudomonas fluorescens

full scientific name: Pseudomonas fluorescens Migula 1895


description: domain/bacteria

full scientific name: <I>Pseudomonas</I> Migula 1894 (Approved Lists 1980)

species: Pseudomonas sp.

synonym: Metapseudomonas

synonym: Zestomonas

synonym: Caenipseudomonas

synonym: Phytopseudomonas

synonym: Ectopseudomonas

synonym: Aquipseudomonas

synonym: Geopseudomonas

synonym: Flavimonas

synonym: Chryseomonas

full scientific name: Pseudomonas sp.

strain designation: Isolate B

description: Pseudomonas monteilii partial 16S rRNA gene, isolate B


description: domain/bacteria

strain designation: Isolate C

description: Pseudomonas plecoglossicida partial 16S rRNA gene, isolate C


description: domain/bacteria

strain designation: Isolate Sigma

description: Pseudomonas sp. Sigma partial 16S rRNA gene, isolate Sigma


description: domain/bacteria

full scientific name: Rhodococcus erythropolis (Gray and Thornton 1928) Goodfellow and Alderson 1979 (Approved Lists 1980)

genus: Rhodococcus

order: Mycobacteriales

species: Rhodococcus erythropolis

synonym: Rhodococcus jialingiae

synonym: Rhodococcus degradans

synonym: Rhodococcus qingshengii

synonym: Nocardia erythropolis

synonym: Rhodococcus enclensis

synonym: Mycobacterium erythropolis

synonym: Rhodococcus baikonurensis

synonym: Nocardia calcarea

synonym: Arthrobacter picolinophilus

full scientific name: Rhodococcus erythropolis (Gray and Thornton 1928) Goodfellow and Alderson 1979 emend. Nouioui et al. 2018

description: ASM230387v1 assembly for Rhodococcus erythropolis ACN1


class: Negativicutes

description: domain/bacteria

family: Sporomusaceae

full scientific name: <I>Sporomusa</I> Möller et al. 1985

genus: Sporomusa

order: Selenomonadales

species: Sporomusa sp.

full scientific name: Sporomusa sp.

description: Sporomusa sp. An4 16S ribosomal RNA gene, partial sequence

description: spAn4DRAFT_v1 assembly for Sporomusa ovata


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus epidermidis (Winslow and Winslow 1908) Evans 1916 (Approved Lists 1980)

genus: Staphylococcus

order: Caryophanales

species: Staphylococcus epidermidis

synonym: Albococcus epidermidis

order: Bacillales


description: domain/bacteria

full scientific name: Staphylococcus haemolyticus Schleifer and Kloos 1975 (Approved Lists 1980)

species: Staphylococcus haemolyticus


description: domain/bacteria

full scientific name: Staphylococcus lugdunensis Freney et al. 1988

species: Staphylococcus lugdunensis


description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus cecorum (Devriese et al. 1983) Williams et al. 1989

genus: Enterococcus

species: Enterococcus cecorum

synonym: Streptococcus cecorum


description: domain/bacteria

family: Streptococcaceae

full scientific name: <I>Streptococcus</I> Rosenbach 1884 (Approved Lists 1980)

genus: Streptococcus

species: Streptococcus sp.

synonym: Okadaella

full scientific name: Streptococcus sp.

description: Streptococcus sp. NUM 1428 gene for 16S rRNA, partial sequence


description: domain/bacteria

full scientific name: Streptococcus varani Bakour et al. 2016

species: Streptococcus varani

description: Streptococcus sp. FF10 partial 16S rRNA gene, strain FF10

description: PRJEB8936_assembly_1 assembly for Streptococcus varani FF10


culture collection no.: DSM 103349, CSUR P2915, Marseille-P2915

description: domain/bacteria

full scientific name: Streptococcus timonensis Ricaboni et al. 2017

species: Streptococcus timonensis

description: Streptococcus sp. Marseille-P2915 partial 16S rRNA gene, strain Marseille-P2915

description: PRJEB15309 assembly for Streptococcus timonensis Marseille-P2915


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces flavovirens (Waksman 1923) Waksman and Henrici 1948 (Approved Lists 1980)

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces flavovirens

synonym: Actinomyces flavogriseus

synonym: Streptomyces flavogriseus

synonym: Actinomyces flavovirens

synonym: Streptomyces nigrifaciens

full scientific name: Streptomyces flavovirens (Waksman 1923) Waksman and Henrici 1948 emend. Lanoot et al. 2005

strain designation: I. A. F. 45 CD

description: ASM17611v1 assembly for Streptomyces pratensis ATCC 33331


description: domain/bacteria

family: Vibrionaceae

full scientific name: Vibrio aphrogenes Tanaka et al. 2018

genus: Vibrio

order: Vibrionales

species: Vibrio aphrogenes

order: Vibrionales, not validated

description: Vibrio aphrogenes strain CA-1004 16S ribosomal RNA gene, partial sequence

description: ASM215773v2 assembly for Vibrio aphrogenes CA-1004

description: Vibrio aphrogenes CA-1004


description: domain/bacteria

full scientific name: Vibrio gangliei Meng et al. 2018

species: Vibrio gangliei

description: Vibrio gangliei strain SZDIS-1 16S ribosomal RNA gene, partial sequence

description: ASM293404v1 assembly for Vibrio gangliei SZDIS-1

description: ASM2600192v1 assembly for Vibrio gangliei DSM 104291


description: domain/bacteria

family: Moraxellaceae

full scientific name: <I>Acinetobacter</I> Brisou and Prévot 1954 (Approved Lists 1980)

genus: Acinetobacter

species: Acinetobacter sp.

full scientific name: Acinetobacter sp.


description: domain/bacteria

full scientific name: Pseudomonas lundensis Molin et al. 1986

species: Pseudomonas lundensis

description: ASM102072v3 assembly for Pseudomonas lundensis AU1044


class: Rubrobacteria

description: domain/bacteria

family: Rubrobacteraceae

full scientific name: Rubrobacter spartanus Norman et al. 2017

genus: Rubrobacter

order: Rubrobacterales

species: Rubrobacter spartanus

description: Rubrobacter spartanus 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Xanthobacteraceae

full scientific name: Roseixanthobacter psychrophilus Soltysiak et al. 2025

genus: Roseixanthobacter

order: Hyphomicrobiales

species: Roseixanthobacter psychrophilus

full scientific name: Roseixanthobacter psychrophilus

genus: Xanthobacter

description: Xanthobacter sp. W30 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Hyphomicrobiaceae

full scientific name: Hyphomicrobium zavarzinii Hirsch 1989

genus: Hyphomicrobium

species: Hyphomicrobium zavarzinii

order: Rhizobiales

description: Hyphomicrobium zavarzinii strain ATCC 27495, 16S rRNA gene


description: domain/bacteria

family: Bacillaceae

full scientific name: Aeribacillus pallidus (Scholz et al. 1988) Miñana-Galbis et al. 2010

genus: Aeribacillus

species: Aeribacillus pallidus

synonym: Geobacillus pallidus

synonym: Bacillus pallidus

strain designation: Yugo, Yugo 65


description: domain/bacteria

family: Nocardioidaceae

full scientific name: <I>Nocardioides</I> Prauser 1976 (Approved Lists 1980)

genus: Nocardioides

order: Propionibacteriales

species: Nocardioides sp.

synonym: Pimelobacter

synonym: Marmoricola

full scientific name: Nocardioides sp.


description: domain/bacteria

order: Actinomycetales

description: Nocardioides sp. RP-B31 partial 16S rRNA gene, strain RP-B31


description: domain/bacteria

description: Nocardioides maritimus partial 16S rRNA gene, type strain SST-40


description: domain/bacteria

description: Nocardioides sp. LnR5-15 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Nocardioides sp. BX5-6 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Nocardioides sp. KV-833 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Nocardioides sp. GT-L17 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Cellulomonadaceae

full scientific name: <I>Cellulomonas</I> Bergey et al. 1923 (Approved Lists 1980)

genus: Cellulomonas

order: Micrococcales

species: Cellulomonas sp.

full scientific name: Cellulomonas sp.

strain designation: Xbu-a


description: domain/bacteria


description: domain/bacteria

family: Promicromonosporaceae

full scientific name: <I>Promicromonospora</I> Krassilnikov et al. 1961 (Approved Lists 1980)

genus: Promicromonospora

species: Promicromonospora sp.

full scientific name: Promicromonospora sp.

description: Promicromonospora sp. CPCC100077 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Promicromonospora sp. 06-Be-009 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Promicromonospora vindobonensis Busse et al. 2003

species: Promicromonospora vindobonensis

description: Promicromonospora sp. I10A-02180 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Beggiatoaceae

full scientific name: Beggiatoa leptomitoformis Dubinina et al. 2017

genus: Beggiatoa

order: Beggiatoales

species: Beggiatoa leptomitoformis

order: Thiotrichales

description: ASM284975v2 assembly for Beggiatoa leptomitoformis D-401


description: domain/bacteria

family: Caulobacteraceae

full scientific name: <I>Caulobacter</I> Henrici and Johnson 1935 (Approved Lists 1980)

genus: Caulobacter

order: Caulobacterales

species: Caulobacter sp.

full scientific name: Caulobacter sp.

strain designation: PMMR 1, PMMR1


description: domain/bacteria

family: Microbacteriaceae

full scientific name: <I>Microbacterium</I> Orla-Jensen 1919 (Approved Lists 1980)

genus: Microbacterium

species: Microbacterium sp.

synonym: Aureobacterium

synonym: Paramicrobacterium

full scientific name: Microbacterium sp.


description: domain/bacteria

family: Nitrobacteraceae

full scientific name: <I>Rhodopseudomonas</I> Czurda and Maresch 1937 (Approved Lists 1980)

genus: Rhodopseudomonas

species: Rhodopseudomonas sp.

full scientific name: Rhodopseudomonas sp.


class: Sphingobacteriia

description: domain/bacteria

family: Sphingobacteriaceae

full scientific name: Sphingobacterium nematocida Liu et al. 2012

genus: Sphingobacterium

order: Sphingobacteriales

species: Sphingobacterium nematocida

full scientific name: Sphingobacterium sp.

order: Flavobacteriales


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980)

genus: Staphylococcus

species: Staphylococcus aureus

synonym: Staphylococcus aureus subsp. anaerobius

synonym: Staphylococcus roterodami

full scientific name: Staphylococcus aureus Rosenbach 1884


class: Thermotogae

description: domain/bacteria

family: Fervidobacteriaceae

full scientific name: <I>Thermosipho</I> Huber et al. 1989

genus: Thermosipho

keyword: phylum/thermotogota

order: Thermotogales

phylum: Thermotogota

species: Thermosipho sp.

full scientific name: Thermosipho sp.

phylum: Thermotogae

description: Thermosipho sp. 2F70-1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Thermosipho sp. G60 partial 16S rRNA gene, strain G60


class: Gammaproteobacteria

description: domain/bacteria

family: Alteromonadaceae

full scientific name: <I>Alteromonas</I> Baumann et al. 1972 (Approved Lists 1980)

genus: Alteromonas

order: Alteromonadales

species: Alteromonas sp.

synonym: Paralteromonas

synonym: Salinimonas

synonym: Neoalteromonas

full scientific name: Alteromonas sp.

description: Alteromonas sp. U70 partial 16S rRNA gene


description: domain/bacteria

description: Alteromonas sp. TK-46(2) 16S ribosomal RNA gene, partial sequence

description: ASM363428v1 assembly for Alteromonas sp. TK-46(2)

description: Alteromonas sp. DSM 26665


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Burkholderia catarinensis Bach et al. 2019

genus: Burkholderia

order: Burkholderiales

species: Burkholderia catarinensis

full scientific name: Burkholderia catarinensis Bach et al. 2017

description: Burkholderia catarinensis strain 89 16S ribosomal RNA gene, partial sequence

description: ASM188370v2 assembly for Burkholderia catarinensis 89


description: domain/bacteria

family: Kaistiaceae

full scientific name: <I>Prosthecomicrobium</I> Staley 1968 (Approved Lists 1980)

genus: Prosthecomicrobium

species: Prosthecomicrobium sp.

full scientific name: Prosthecomicrobium sp.

description: Prosthecomicrobium sp. ATCC 27825 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Acidothermaceae

genus: Acidothermus

order: Acidothermales

species: Acidothermus cellulolyticus

full scientific name: Acidothermus cellulolyticus Mohagheghi et al. 1986 emend. Nouioui et al. 2018

description: Acidothermus cellulolyticus 16S rRNA, partial

description: Acidothermus cellulolyticus 11B strain ATCC 43068 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

full scientific name: Prosthecomicrobium pneumaticum Staley 1968 (Approved Lists 1980)

species: Prosthecomicrobium pneumaticum

description: Prosthecomicrobium pneumaticum gene for 16S rRNA, partial sequence


description: domain/bacteria

family: Sulfobacillaceae

full scientific name: Sulfobacillus thermosulfidooxidans Golovacheva and Karavaiko 1991

genus: Sulfobacillus

order: Eubacteriales

species: Sulfobacillus thermosulfidooxidans

class: Bacilli

family: Alicyclobacillaceae

order: Clostridiales

strain designation: CBAR 13

description: Sulfobacillus sp. CBAR13 gene for 16S rRNA, partial sequence


description: domain/bacteria

full scientific name: <I>Rhodoplanes</I> Hiraishi and Ueda 1994

genus: Rhodoplanes

species: Rhodoplanes sp.

full scientific name: Rhodoplanes sp.


description: domain/bacteria

family: Clostridiaceae

full scientific name: <I>Caloramator</I> Collins et al. 1994

genus: Caloramator

species: Caloramator sp.

full scientific name: Caloramator sp.

description: Caloramator sp. 29R 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Hyphomicrobiaceae

full scientific name: <I>Dichotomicrobium</I> Hirsch and Hoffmann 1989

genus: Dichotomicrobium

species: Dichotomicrobium sp.

full scientific name: Dichotomicrobium sp.


class: Actinomycetes

description: domain/bacteria

family: Intrasporangiaceae

full scientific name: <I>Terrabacter</I> Collins et al. 1989

genus: Terrabacter

species: Terrabacter sp.

full scientific name: Terrabacter sp.


description: domain/bacteria

family: Comamonadaceae

full scientific name: Acidovorax carolinensis Singleton et al. 2020

genus: Acidovorax

species: Acidovorax carolinensis

description: Acidovorax sp. NA3 16S ribosomal RNA gene, partial sequence

description: ASM215714v1 assembly for Acidovorax carolinensis NA3


description: domain/bacteria

family: Tsukamurellaceae

genus: Tsukamurella

order: Mycobacteriales

species: Tsukamurella tyrosinosolvens

synonym: Tsukamurella carboxydivorans

class: Actinobacteria

full scientific name: Tsukamurella tyrosinosolvens Yassin et al. 1997 emend. Teng et al. 2016

description: ASM286978v1 assembly for Tsukamurella tyrosinosolvens MH1


description: domain/bacteria

family: Paenibacillaceae

full scientific name: <I>Paenibacillus</I> Ash et al. 1994

genus: Paenibacillus

order: Caryophanales

species: Paenibacillus sp.

synonym: Aerobacillus

full scientific name: Paenibacillus sp.

order: Bacillales

description: Paenibacillus ginsengagri gene for 16S rRNA, partial sequence, strain: Gsoil 3125


description: domain/bacteria

strain designation: TR 16


description: domain/bacteria


description: domain/bacteria

description: Paenibacillus sp. FH2071 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Paenibacillus caespitis partial 16S rRNA gene, type strain LMG 23879T


description: domain/bacteria

description: Paenibacillus telluris partial 16S rRNA gene, type strain LMG 23881T


description: domain/bacteria

full scientific name: Paenibacillus apiarius (ex Katznelson 1955) Nakamura 1996

species: Paenibacillus apiarius

strain designation: SBUG 1947


description: domain/bacteria

full scientific name: <I>Marinobacter</I> Gauthier et al. 1992

genus: Marinobacter

species: Marinobacter sp.

full scientific name: Marinobacter sp.

description: Marinobacter sp. 908115 16S ribosomal RNA gene, partial sequence


description: domain/bacteria


description: domain/bacteria

description: Marinobacter sp. TT1 16S ribosomal RNA gene, partial sequence

description: IMG-taxon 2619618959 annotated assembly for Marinobacter salarius DSM 26291


description: domain/bacteria

description: Marinobacter sp. TK-36 16S ribosomal RNA gene, partial sequence

description: IMG-taxon 2619618958 annotated assembly for Marinobacter sp. DSM 26671


class: Deinococci

description: domain/bacteria

family: Thermaceae

full scientific name: Thermus oshimai Williams et al. 1996

genus: Thermus

keyword: phylum/deinococcota

order: Thermales

phylum: Deinococcota

species: Thermus oshimai

phylum: Deinococcus-Thermus

description: ASM30988v1 assembly for Thermus oshimai JL-2


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: Pseudonocardia antimicrobica Zhao et al. 2021

genus: Pseudonocardia

order: Pseudonocardiales

species: Pseudonocardia antimicrobica

full scientific name: Pseudonocardia antimicrobica Zhao et al. 2012

order: Actinomycetales

description: Pseudonocardia antimicrobica 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

full scientific name: <I>Pseudonocardia</I> Henssen 1957 (Approved Lists 1980)

species: Pseudonocardia sp.

synonym: Amycolata

synonym: Pseudoamycolata

synonym: Actinobispora

full scientific name: Pseudonocardia sp.

description: Pseudonocardia sp. YIM 65235 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Piscirickettsiaceae

full scientific name: Thiomicrorhabdus frisia (Brinkhoff et al. 1999) Boden et al. 2017

genus: Thiomicrorhabdus

order: Beggiatoales

species: Thiomicrorhabdus frisia

synonym: Thiomicrospira frisia


description: domain/bacteria

family: Deinococcaceae

full scientific name: <I>Deinococcus</I> Brooks and Murray 1981

genus: Deinococcus

order: Deinococcales

species: Deinococcus sp.

synonym: Deinobacter

full scientific name: Deinococcus sp.

description: Deinococcus sp. B.E4-4 gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Deinococcus sp. DaeR-4 gene for 16S rRNA, partial sequence


description: domain/bacteria

family: Pasteurellaceae

full scientific name: <I>Pasteurella</I> Trevisan 1887 (Approved Lists 1980)

genus: Pasteurella

order: Pasteurellales

species: Pasteurella sp.

full scientific name: Pasteurella sp.


description: domain/bacteria

family: Microbacteriaceae

full scientific name: <I>Leifsonia</I> Evtushenko et al. 2000

genus: Leifsonia

order: Micrococcales

species: Leifsonia sp.

synonym: Leifsonia

synonym: Diaminobutyricibacter

full scientific name: Leifsonia sp.

description: Leifsonia sp. YIM C813 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Leifsonia sp. MSL 02 16S ribosomal RNA gene, partial sequence


class: Planctomycetia

description: domain/bacteria

family: Gemmataceae

full scientific name: <I>Gemmata</I> Franzmann and Skerman 1985

genus: Gemmata

keyword: phylum/planctomycetota

order: Gemmatales

phylum: Planctomycetota

species: Gemmata sp.

full scientific name: Gemmata sp.

order: Planctomycetales

phylum: Planctomycetes


description: domain/bacteria

family: Beutenbergiaceae

full scientific name: Salana multivorans von Wintzingerode et al. 2001

genus: Salana

species: Salana multivorans


description: domain/bacteria

family: Bacillaceae

full scientific name: <I>Geobacillus</I> Nazina et al. 2001

genus: Geobacillus

species: Geobacillus sp.

full scientific name: Geobacillus sp.


description: domain/bacteria

description: Geobacillus thermoparaffinivorans strain DM2 16S ribosomal RNA gene, complete sequence


description: domain/bacteria

family: Fervidobacteriaceae

full scientific name: <I>Fervidobacterium</I> Patel et al. 1985

genus: Fervidobacterium

order: Thermotogales

species: Fervidobacterium sp.

full scientific name: Fervidobacterium sp.

description: Fervidobacterium sp. R8 partial 16S rRNA gene, strain R8


class: Spirochaetia

description: domain/bacteria

family: Spirochaetaceae

full scientific name: <I>Spirochaeta</I> Ehrenberg 1835 (Approved Lists 1980)

genus: Spirochaeta

keyword: phylum/spirochaetota

order: Spirochaetales

phylum: Spirochaetota

species: Spirochaeta sp.

synonym: Winmispira

full scientific name: Spirochaeta sp.

phylum: Spirochaetes

strain designation: WS


description: domain/bacteria

family: Vibrionaceae

full scientific name: Vibrio cholerae Pacini 1854 (Approved Lists 1980)

genus: Vibrio

order: Vibrionales

phylum: Pseudomonadota

species: Vibrio cholerae

synonym: Vibrio albensis

full scientific name: Vibrio cholerae Pacini 1854

order: Vibrionales, not validated

phylum: Proteobacteria

description: ASM1794828v1 assembly for Vibrio cholerae A1552

description: ASM309769v1 assembly for Vibrio cholerae A1552

description: ASM289285v1 assembly for Vibrio cholerae A1552

description: ASM299721v1 assembly for Vibrio cholerae A1552


description: domain/bacteria

full scientific name: <I>Thiomonas</I> Moreira and Amils 1997

genus: Thiomonas

order: Burkholderiales

species: Thiomonas sp.

full scientific name: Thiomonas sp.


full scientific name: Thiomonas metallidurans

species: Thiomonas metallidurans

strain designation: FB-cd

description: Thiomonas sp. FB-Cd 16S ribosomal RNA gene, partial sequence

description: ASM73377v1 assembly for Thiomonas sp. FB-Cd


full scientific name: Thiomonas ferrovorans

species: Thiomonas ferrovorans

description: Thiomonas sp. FB-6 16S ribosomal RNA gene, partial sequence

description: ASM37764v1 assembly for Thiomonas sp. FB-6


class: Cytophagia

family: Spirosomaceae

full scientific name: Flectobacillus speluncae Denner et al.

genus: Flectobacillus

order: Cytophagales

phylum: Bacteroidetes

species: Flectobacillus speluncae

description: Flectobacillus sp. GWF20A partial 16S rRNA gene, isolate GWF20A


description: domain/bacteria

family: Pseudoalteromonadaceae

full scientific name: <I>Pseudoalteromonas</I> Gauthier et al. 1995

genus: Pseudoalteromonas

order: Alteromonadales

species: Pseudoalteromonas sp.

full scientific name: Pseudoalteromonas sp.

description: Pseudoalteromonas sp. NW 4327 partial 16S rRNA gene, strain NW 4327

description: PseNW1.0 assembly for Pseudoalteromonas agarivorans NW 4327


description: domain/bacteria

description: Pseudoalteromonas sp. TK-34(2) 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Pseudoalteromonas sp. TK-105 16S ribosomal RNA gene, partial sequence

description: IMG-taxon 2619619023 annotated assembly for Pseudoalteromonas sp. DSM 26666


description: domain/bacteria


class: Alphaproteobacteria

description: domain/bacteria

family: Roseobacteraceae

full scientific name: <I>Ruegeria</I> Uchino et al. 1999

genus: Ruegeria

order: Rhodobacterales

species: Ruegeria sp.

synonym: Silicibacter

synonym: Thalassovita

synonym: Falsiruegeria

family: Rhodobacteraceae

full scientific name: Ruegeria sp.


description: domain/bacteria

family: Bartonellaceae

full scientific name: Aminobacter ciceronei McDonald et al. 2005

genus: Aminobacter

order: Hyphomicrobiales

species: Aminobacter ciceronei

family: Phyllobacteriaceae

order: Rhizobiales


description: domain/bacteria

family: Azospirillaceae

full scientific name: Inquilinus limosus Coenye et al. 2002

genus: Inquilinus

order: Rhodospirillales

species: Inquilinus limosus


description: domain/bacteria

family: Xanthobacteraceae

full scientific name: <I>Ancylobacter</I> Raj 1983

genus: Ancylobacter

species: Ancylobacter sp.

synonym: Starkeya

synonym: Microcyclus

synonym: Angulomicrobium

synonym: Methylorhabdus

full scientific name: Angulomicrobium sp.

genus: Angulomicrobium

species: Angulomicrobium sp.


description: domain/bacteria

full scientific name: Caldibacillus debilis (Banat et al. 2004) Coorevits et al. 2012

genus: Caldibacillus

order: Caryophanales

phylum: Bacillota

species: Caldibacillus debilis

synonym: Geobacillus debilis

order: Bacillales


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium intracellulare subsp. chimaera (Tortoli et al. 2004) Nouioui et al. 2018

genus: Mycobacterium

order: Mycobacteriales

synonym: Mycobacterium intracellulare subsp. yongonense

synonym: Mycobacterium chimaera

synonym: Mycobacterium yongonense

order: Actinomycetales

description: ASM221926v1 assembly for Mycobacterium intracellulare subsp. chimaera ZUERICH-1


family: Alteromonadaceae

full scientific name: Marinobacter australis

genus: Marinobacter

species: Marinobacter australis

description: Marinobacter sp. DG980 small subunit ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Viridibacillus arvi (Heyrman et al. 2005) Albert et al. 2007

genus: Viridibacillus

species: Viridibacillus arvi

synonym: Bacillus arvi

phylum: Firmicutes

description: Viridibacillus arvi 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Piscirickettsiaceae

full scientific name: Hydrogenovibrio thermophilus (Takai et al. 2004) Boden et al. 2017

genus: Hydrogenovibrio

order: Beggiatoales

species: Hydrogenovibrio thermophilus

synonym: Thiomicrospira thermophila

order: Thiotrichales


description: domain/bacteria

full scientific name: <I>Exiguobacterium</I> Collins et al. 1984

genus: Exiguobacterium

species: Exiguobacterium sp.

family: Bacilli, not assigned to family

full scientific name: Exiguobacterium sp.


description: domain/bacteria

strain designation: BS3 jbg


description: domain/bacteria

family: Microbacteriaceae

full scientific name: <I>Curtobacterium</I> Yamada and Komagata 1972 (Approved Lists 1980)

genus: Curtobacterium

order: Micrococcales

phylum: Actinomycetota

species: Curtobacterium sp.

full scientific name: Curtobacterium sp.

description: Flavobacterium sp. I10A-02067 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Bacillaceae

full scientific name: <I>Marinococcus</I> Hao et al. 1985

genus: Marinococcus

species: Marinococcus sp.

full scientific name: Marinococcus sp.


description: domain/bacteria

family: Idiomarinaceae

full scientific name: <I>Idiomarina</I> Ivanova et al. 2000

genus: Idiomarina

species: Idiomarina sp.

full scientific name: Idiomarina sp.


description: domain/bacteria

description: Gamma proteobacterium E-034 16S ribosomal RNA gene, partial sequence


culture collection no.: DSM 15861, YIM KN3

description: domain/bacteria

full scientific name: <I>Virgibacillus</I> Heyndrickx et al. 1998

genus: Virgibacillus

species: Virgibacillus sp.

synonym: Salibacillus

synonym: Paracerasibacillus

full scientific name: Virgibacillus sp.


culture collection no.: DSM 15864, YIM KN 16

description: domain/bacteria


description: domain/bacteria

description: Virgibacillus sp. BH187 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Bacillus permians 16S ribosomal RNA gene, complete sequence


class: Halobacteria

description: domain/archaea

domain: Archaea

family: Natrialbaceae

full scientific name: Natronorubrum thiooxidans Sorokin et al. 2005

genus: Natronorubrum

keyword: phylum/methanobacteriota

order: Halobacteriales

phylum: Methanobacteriota

species: Natronorubrum thiooxidans

full scientific name: Natronorubrum thiooxidans

phylum: Euryarchaeota

description: Natronorubrum thiooxidans 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: <I>Anoxybacillus</I> Pikuta et al. 2000

genus: Anoxybacillus

species: Anoxybacillus sp.

full scientific name: Anoxybacillus sp.

description: Anoxybacillus beppuensis gene for 16S rRNA, partial sequence


description: domain/bacteria

family: Colwelliaceae

full scientific name: <I>Colwellia</I> Deming et al. 1988

genus: Colwellia

species: Colwellia sp.

synonym: Cognaticolwellia

full scientific name: Colwellia sp.

description: Colwellia sp. MN1-44 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

full scientific name: <I>Filobacillus</I> Schlesner et al. 2001

genus: Filobacillus

species: Filobacillus sp.

full scientific name: Filobacillus sp.

description: Filobacillus sp. SL2-1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Nocardioidaceae

full scientific name: Aeromicrobium panacisoli Siddiqi et al. 2019

genus: Aeromicrobium

order: Propionibacteriales

species: Aeromicrobium panacisoli

phylum: Actinobacteria

description: Aeromicrobium ginsengisoli gene for 16S rRNA, partial sequence, strain: Gsoil 137


description: domain/bacteria

full scientific name: <I>Aeromicrobium</I> Miller et al. 1991

species: Aeromicrobium sp.

full scientific name: Aeromicrobium sp.

description: Aeromicrobium sp. E12 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Aeromicrobium sp. L16 16S ribosomal RNA gene, partial sequence


family: Methylocystaceae

full scientific name: Methylosinus acidophilus

genus: Methylosinus

species: Methylosinus acidophilus

description: Methylosinus acidophilus 16S ribosomal RNA gene, complete sequence


description: domain/bacteria

full scientific name: <I>Subtercola</I> Männistö et al. 2000

genus: Subtercola

species: Subtercola sp.

full scientific name: Subtercola sp.


description: domain/bacteria

family: Jonesiaceae

full scientific name: <I>Sanguibacter</I> Fernández-Garayzábal et al. 1995

genus: Sanguibacter

species: Sanguibacter sp.

full scientific name: Sanguibacter sp.


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Paraburkholderia terrae (Yang et al. 2006) Sawana et al. 2015

genus: Paraburkholderia

species: Paraburkholderia terrae

synonym: Burkholderia terrae


description: domain/bacteria

family: Ornithinimicrobiaceae

full scientific name: <I>Ornithinimicrobium</I> Groth et al. 2001

genus: Ornithinimicrobium

species: Ornithinimicrobium sp.

full scientific name: Ornithinimicrobium sp.


description: domain/bacteria

full scientific name: <I>Gracilibacillus</I> Wainø et al. 1999

genus: Gracilibacillus

species: Gracilibacillus sp.

full scientific name: Gracilibacillus sp.

description: Gracilibacillus sp. BH235 16S ribosomal RNA gene, partial sequence


description: domain/bacteria


description: domain/bacteria

full scientific name: <I>Oceanobacillus</I> Lu et al. 2002

genus: Oceanobacillus

species: Oceanobacillus sp.

full scientific name: Oceanobacillus sp.

strain designation: TH


description: domain/bacteria

strain designation: UH


culture collection no.: DSM 17859, YIM DH3

description: domain/bacteria

description: Oceanobacillus sp. YIM DH3 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Oxalobacteraceae

full scientific name: Massilia violaceinigra Wang et al. 2018

genus: Massilia

species: Massilia violaceinigra

synonym: Mokoshia violaceinigra

description: Duganella sp. B2 16S ribosomal RNA gene, partial sequence


class: Flavobacteriia

description: domain/bacteria

family: Weeksellaceae

full scientific name: <I>Chryseobacterium</I> Vandamme et al. 1994

genus: Chryseobacterium

order: Flavobacteriales

phylum: Bacteroidota

species: Chryseobacterium sp.

synonym: Soonwooa

synonym: Halpernia

synonym: Epilithonimonas

synonym: Kaistella

synonym: Planobacterium

synonym: Sejongia

full scientific name: Chryseobacterium sp.


description: domain/bacteria

description: Candidatus Chryseobacterium massiliensis strain URChM1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Flavobacteriaceae

description: Chryseobacterium taichungense strain JW2 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Alloboseaceae

full scientific name: <I>Allobosea</I> Deshmukh and Oren 2026

genus: Allobosea

species: Allobosea sp.

synonym: Bosea

family: Boseaceae

full scientific name: Bosea sp.

genus: Bosea

species: Bosea sp.

strain designation: WAO

description: Bosea sp. WAO 16S ribosomal RNA gene, partial sequence

description: ASM150983v1 assembly for Bosea sp. WAO

description: Bosea sp. DSM 102914

description: Bosea sp. DSM 102914


description: domain/bacteria

family: Caryophanaceae

full scientific name: <I>Sporosarcina</I> Kluyver and van Niel 1936 (Approved Lists 1980)

genus: Sporosarcina

species: Sporosarcina sp.

synonym: Filibacter

full scientific name: Sporosarcina sp.

description: Sporosarcina ginsengisoli gene for 16S rRNA, partial sequence, strain: Gsoil 1433


description: domain/bacteria


description: domain/bacteria

family: Promicromonosporaceae

full scientific name: <I>Isoptericola</I> Stackebrandt et al. 2004

genus: Isoptericola

species: Isoptericola sp.

full scientific name: Isoptericola sp.

description: Isoptericola sp. JSM 077025 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Isoptericola sp. BL-18 16S ribosomal RNA gene, partial sequence


description: domain/bacteria


class: Thermococci

description: domain/archaea

family: Thermococcaceae

full scientific name: <I>Pyrococcus</I> Fiala and Stetter 1986

genus: Pyrococcus

order: Thermococcales

species: Pyrococcus sp.

full scientific name: Pyrococcus sp.

description: ASM26373v1 assembly for Pyrococcus sp. ST04


description: domain/bacteria

family: Alcanivoracaceae

full scientific name: <I>Alcanivorax</I> Yakimov et al. 1998

genus: Alcanivorax

order: Oceanospirillales

species: Alcanivorax sp.

synonym: Isoalcanivorax

synonym: Fundibacter

synonym: Alloalcanivorax

full scientific name: Alcanivorax sp.

description: Alcanivorax sp. TY4 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Alcanivorax sp. TY5 16S ribosomal RNA gene, partial sequence

description: IMG-taxon 2634166299 annotated assembly for Alcanivorax sp. DSM 26293


description: domain/bacteria

description: Alcanivorax sp. TY6 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Alcanivorax sp. TK-40(1) 16S ribosomal RNA gene, partial sequence

description: IMG-taxon 2724679733 annotated assembly for Alcanivorax sp. DSM 26295


description: domain/bacteria

description: Alcanivorax sp. TK-23 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Levilactobacillus brevis (Orla-Jensen 1919) Zheng et al. 2020

genus: Levilactobacillus

order: Lactobacillales

species: Levilactobacillus brevis

synonym: Betabacterium breve

synonym: Lactobacillus brevis


description: domain/bacteria

family: Propionibacteriaceae

full scientific name: <I>Microlunatus</I> Nakamura et al. 1995

genus: Microlunatus

species: Microlunatus sp.

synonym: Friedmanniella

full scientific name: Microlunatus sp.

description: Microlunatus ginsengiterrae gene for 16S rRNA, partial sequence

description: ASM970736v1 assembly for Microlunatus sp. Gsoil 973


description: domain/bacteria

family: Rhodospirillales, not assigned to family

full scientific name: Dechlorospirillum anomalous Michaelidou et al. 2000

genus: Dechlorospirillum

species: Dechlorospirillum anomalous

family: Rhodospirillaceae

strain designation: WD

description: Dechlorospirillum sp. WD 16S ribosomal RNA gene, complete sequence

description: Magnetospirillum sp. WD


class: Fibrobacteria

description: domain/bacteria

family: Fibrobacteraceae

full scientific name: Fibrobacter intestinalis Montgomery et al. 1988

genus: Fibrobacter

keyword: phylum/fibrobacterota

order: Fibrobacterales

phylum: Fibrobacterota

species: Fibrobacter intestinalis

phylum: Fibrobacteres

strain designation: UW S1, UWS1

description: Fibrobacter intestinalis strain DSM 104696 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

strain designation: UW S2, UWS2


description: domain/bacteria

full scientific name: Hallerella succinigenes Wylensek et al. 2021

genus: Hallerella

species: Hallerella succinigenes

full scientific name: Hallerella succinigenes D. Wylensek

strain designation: UW S3, UWS3

description: Hallerella succinigenes strain UWS3 16S ribosomal RNA gene, partial sequence

description: ASM279767v1 assembly for Hallerella succinigenes UWS3


description: domain/bacteria

family: Francisellaceae

full scientific name: Francisella persica (Suitor and Weiss 1961) Larson et al. 2016

genus: Francisella

species: Francisella persica

synonym: Francisella persica

synonym: Wolbachia persica

description: [Wolbachia] persica strain ATCC VR-331 16S ribosomal RNA gene, partial sequence.

description: Wolbachia persica strain ATCC VR-331 16S ribosomal RNA gene, partial sequence.

description: ASM127536v1 assembly for Francisella persica ATCC VR-331 FSC845

description: ASM165395v1 assembly for Francisella persica ATCC VR-331


description: domain/bacteria

full scientific name: Loigolactobacillus coryniformis subsp. coryniformis (Abo-Elnaga and Kandler 1965) Zheng et al. 2020

genus: Loigolactobacillus

synonym: Lactobacillus coryniformis subsp. coryniformis


description: domain/bacteria

full scientific name: Myroides odoratimimus Vancanneyt et al. 1996

genus: Myroides

species: Myroides odoratimimus


description: domain/bacteria

family: Paracoccaceae

full scientific name: Amaricoccus macauensis Maszenan et al. 1997

genus: Amaricoccus

order: Rhodobacterales

species: Amaricoccus macauensis

family: Rhodobacteraceae

description: Amaricoccus macauensis 16S ribosomal RNA gene, complete sequence

description: ASM1420190v1 assembly for Amaricoccus macauensis DSM 101730


description: domain/bacteria

family: Pseudoalteromonadaceae

full scientific name: Pseudoalteromonas ruthenica Ivanova et al. 2002

genus: Pseudoalteromonas

order: Alteromonadales

species: Pseudoalteromonas ruthenica

description: Pseudoalteromonas ruthenica strain KMM300 16S ribosomal RNA gene, partial sequence

description: ASM880809v1 assembly for Pseudoalteromonas ruthenica LMG 19699


description: domain/bacteria

family: Bacillaceae

full scientific name: Peribacillus asahii (Yumoto et al. 2004) Patel and Gupta 2020

genus: Peribacillus

species: Peribacillus asahii

synonym: Bacillus asahii

description: Bacillus asahii gene for 16S rRNA, partial sequence

description: ASM357072v1 assembly for Peribacillus asahii MA001


class: Bacteroidia

description: domain/bacteria

family: Bacteroidaceae

full scientific name: Bacteroides nordii Song et al. 2005

genus: Bacteroides

order: Bacteroidales

species: Bacteroides nordii

description: Bacteroides sp. WAL 11050 16S ribosomal RNA gene, partial sequence

description: Bacteroides nordii gene for 16S ribosomal RNA, partial sequence, strain: JCM 12987

description: Bacteroides nordii strain JCM12987 16S ribosomal RNA gene, partial sequence.

description: ASM61346v1 assembly for Bacteroides nordii WAL 11050 = JCM 12987

description: ASM1993066v1 assembly for Bacteroides nordii FDAARGOS_1461

description: Bacteroides nordii strain FDAARGOS_1461

description: Bacteroides nordii strain FDAARGOS_1461

description: Bacteroides nordii strain FDAARGOS_1461


class: not assigned to class and not assigned to phylum

family: Not assigned to family

full scientific name: Rhodospirillaceae (not further classified)

genus: Rhodospirillaceae

order: Not assigned to order

phylum: not assigned to phylum

description: Rhodospirillaceae bacterium 03PA-Blue-76 gene for 16S ribosomal RNA, partial sequence


full scientific name: Rhodobacteraceae (not further classified)

genus: Rhodobacteraceae


description: domain/bacteria

family: Micrococcaceae

full scientific name: <I>Citricoccus</I> Altenburger et al. 2002

genus: Citricoccus

species: Citricoccus sp.

full scientific name: Citricoccus sp.


description: domain/bacteria

family: Thalassospiraceae

full scientific name: <I>Thalassospira</I> López-López et al. 2002

genus: Thalassospira

order: Rhodospirillales

species: Thalassospira sp.

full scientific name: Thalassospira sp.

description: Thalassospira sp. TK-13(2) 16S ribosomal RNA gene, partial sequence

description: ASM361021v1 assembly for Thalassospira sp. DSM 26710

description: Thalassospira sp. DSM 26710


description: domain/bacteria

family: Intrasporangiaceae

full scientific name: <I>Janibacter</I> Martin et al. 1997

genus: Janibacter

species: Janibacter sp.

full scientific name: Janibacter sp.

description: Janibacter sp. SST-36 partial 16S rRNA gene, strain SST-36


description: domain/bacteria

description: Janibacter sp. RC5-101 16S ribosomal RNA gene, partial sequence


description: domain/bacteria


description: domain/bacteria

family: Deinococcaceae

full scientific name: Deinococcus yunweiensis Zhang et al. 2007

genus: Deinococcus

order: Deinococcales

phylum: Deinococcota

species: Deinococcus yunweiensis

phylum: Deinococcus-Thermus


description: domain/bacteria

family: Microbulbiferaceae

full scientific name: <I>Microbulbifer</I> González et al. 1997

genus: Microbulbifer

order: Cellvibrionales

species: Microbulbifer sp.

full scientific name: Microbulbifer sp.


description: domain/bacteria

description: Microbulbifer gwangyangensis strain M9 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Halomonadaceae

full scientific name: <I>Halomonas</I> Vreeland et al. 1980

genus: Halomonas

species: Halomonas sp.

synonym: Volcaniella

synonym: Franzmannia

synonym: Onishia

synonym: Billgrantia

synonym: Vreelandella

synonym: Deleya

synonym: Litchfieldella

synonym: Bisbaumannia

full scientific name: Halomonas sp.


description: domain/bacteria

description: Chromohalobacter sp. LMC2-5 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Halomonas sp. H1(2012) 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Halomonas sp. GOS-1 16S ribosomal RNA gene, partial sequence

description: IMG-taxon 2619618960 annotated assembly for Vreelandella titanicae DSM 26667


description: domain/bacteria

family: Microbacteriaceae

full scientific name: <I>Agrococcus</I> Groth et al. 1996

genus: Agrococcus

species: Agrococcus sp.

full scientific name: Agrococcus sp.

order: Actinomycetales

strain designation: BF 55

description: Leifsonia sp. BF55 partial 16S rRNA gene, isolate BF55


description: domain/bacteria

family: Bartonellaceae

full scientific name: Chelativorans multitrophicus Doronina et al. 2010

genus: Chelativorans

order: Hyphomicrobiales

species: Chelativorans multitrophicus

synonym: Chelativorans oligotrophicus

family: Phyllobacteriaceae

order: Rhizobiales

strain designation: ANF 1, BNC7


description: domain/bacteria


description: domain/bacteria

strain designation: ALN1, BNC5


description: domain/bacteria

strain designation: ANF2, BNC8


description: domain/bacteria

strain designation: ANF11, BNC3


description: domain/bacteria

full scientific name: Piezobacter thermophilus Takai et al. 2009

genus: Piezobacter

species: Piezobacter thermophilus

full scientific name: Piezobacter thermophila Takai et al. 2009

species: Piezobacter thermophila

description: Piezobacter thermophilus gene for 16S rRNA, partial sequence, strain: 108


description: domain/bacteria

family: Chromatiaceae

full scientific name: <I>Rheinheimera</I> Brettar et al. 2002

genus: Rheinheimera

order: Chromatiales

species: Rheinheimera sp.

synonym: Pararheinheimera

full scientific name: Rheinheimera sp.

description: Rheinheimera sp. BZ19 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Paenibacillaceae

full scientific name: <I>Paenibacillus</I> Ash et al. 1994

genus: Paenibacillus

order: Caryophanales

species: Paenibacillus sp.

synonym: Aerobacillus

full scientific name: Paenibacillus sp.

order: Bacillales

description: Paenibacillus glebae partial 16S rRNA gene, type strain LMG 23880T


class: Betaproteobacteria

description: domain/bacteria

family: Comamonadaceae

full scientific name: <I>Curvibacter</I> Ding and Yokota 2004

genus: Curvibacter

order: Burkholderiales

species: Curvibacter sp.

full scientific name: Curvibacter sp.


description: domain/bacteria

family: Hymenobacteraceae

full scientific name: <I>Adhaeribacter</I> Rickard et al. 2005

genus: Adhaeribacter

order: Cytophagales

species: Adhaeribacter sp.

full scientific name: Adhaeribacter sp.

description: Algoriphagus sp. I10B-02282 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Flammeovirgaceae

full scientific name: Rapidithrix thailandica Srisukchayakul et al. 2007

genus: Rapidithrix

species: Rapidithrix thailandica

description: Rapidithrix thailandica gene for 16S ribosomal RNA, partial sequence, strain: TISTR 1750

description: Rapidithrix thailandica gene for 16S ribosomal RNA, partial sequence, strain: JCM 23209

description: ASM3971035v1 assembly for Rapidithrix thailandica JCM 23209


class: Clostridia

description: domain/bacteria

family: Lachnospiraceae

full scientific name: Blautia wexlerae Liu et al. 2008

genus: Blautia

order: Eubacteriales

species: Blautia wexlerae

order: Clostridia, not assigned to order


class: Gammaproteobacteria

description: domain/bacteria

full scientific name: <I>Chromohalobacter</I> Ventosa et al. 1989

genus: Chromohalobacter

order: Oceanospirillales

species: Chromohalobacter sp.

full scientific name: Chromohalobacter sp.


class: Methanosarcinia

description: domain/archaea

family: Methanosarcinaceae

full scientific name: <I>Methanolobus</I> König and Stetter 1983

genus: Methanolobus

order: Methanosarcinales

species: Methanolobus sp.

class: Methanomicrobia

full scientific name: Methanolobus sp.

strain designation: Hig 11, HigM

description: Methanolobus sp. HigM gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

family: Paracoccaceae

full scientific name: Paracoccus marinus Khan et al. 2008

genus: Paracoccus

order: Rhodobacterales

species: Paracoccus marinus

family: Rhodobacteraceae


class: Mollicutes

description: domain/bacteria

family: Mycoplasmataceae

full scientific name: Mycoplasma tullyi Yavari et al. 2017

genus: Mycoplasma

keyword: phylum/mycoplasmatota

order: Mycoplasmatales

phylum: Mycoplasmatota

species: Mycoplasma tullyi

phylum: Tenericutes

description: Mycoplasma sp. 56A97 DNA containing 16S rRNA gene (partial) and 16S-23S intergenic spacer region, strain 56A97


description: domain/bacteria

family: Shewanellaceae

full scientific name: <I>Shewanella</I> MacDonell and Colwell 1986

genus: Shewanella

order: Alteromonadales

phylum: Pseudomonadota

species: Shewanella sp.

full scientific name: Shewanella sp.


class: Bacilli

description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lactiplantibacillus fabifermentans (De Bruyne et al. 2009) Zheng et al. 2020

genus: Lactiplantibacillus

order: Lactobacillales

species: Lactiplantibacillus fabifermentans

synonym: Lactobacillus fabifermentans

description: Lfabi1.0 assembly for Lactiplantibacillus fabifermentans T30PCM01


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Myroides profundi Zhang et al. 2009

genus: Myroides

order: Flavobacteriales

species: Myroides profundi

full scientific name: Myroides profundi Zhang et al. 2009 emend. Yan et al. 2012


description: domain/bacteria

family: Caryophanaceae

full scientific name: Rummeliibacillus stabekisii Vaishampayan et al. 2009

genus: Rummeliibacillus

species: Rummeliibacillus stabekisii

description: Rummeliibacillus stabekisii gene for 16S rRNA, partial sequence


description: domain/bacteria

family: Spongiibacteraceae

full scientific name: Spongiibacter tropicus Hwang and Cho 2009

genus: Spongiibacter

order: Cellvibrionales

species: Spongiibacter tropicus

order: Pseudomonadales

phylum: Proteobacteria

description: Gamma proteobacterium CL-CB467 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Borreliaceae

full scientific name: Borrelia americana Rudenko et al. 2010

genus: Borrelia

order: Spirochaetales

phylum: Spirochaetota

species: Borrelia americana

synonym: Borreliella americana

phylum: Spirochaetes

description: Borrelia americana strain SCW-41 16S ribosomal RNA (rrs) gene, partial sequence


description: domain/bacteria

family: Erwiniaceae

full scientific name: Pantoea septica Brady et al. 2010

genus: Pantoea

order: Enterobacterales

species: Pantoea septica

order: Enterobacteriales, not validated

description: Pantoea septica strain LMG 5345 16S ribosomal RNA gene, partial sequence.

description: ASM209557v1 assembly for Pantoea septica LMG 5345


class: Desulfovibrionia

description: domain/bacteria

family: Desulfonatronovibrionaceae

full scientific name: Desulfonatronovibrio thiodismutans Sorokin et al. 2011

genus: Desulfonatronovibrio

order: Desulfovibrionales

phylum: Thermodesulfobacteriota

species: Desulfonatronovibrio thiodismutans

class: Deltaproteobacteria

family: Desulfohalobiaceae

description: Desulfonatronovibrio thiodismutans strain AHT10 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Chromatiaceae

full scientific name: Rheinheimera nanhaiensis Li et al. 2011

genus: Rheinheimera

order: Chromatiales

species: Rheinheimera nanhaiensis

description: Rheinheimera nanhaiensis E407-8 16S ribosomal RNA gene, partial sequence

description: ASM29669v1 assembly for Rheinheimera nanhaiensis E407-8


class: Actinomycetes

description: domain/bacteria

family: Micrococcaceae

full scientific name: Neomicrococcus aestuarii (Baik et al. 2011) Prakash et al. 2015

genus: Neomicrococcus

order: Micrococcales

phylum: Actinomycetota

species: Neomicrococcus aestuarii

synonym: Zhihengliuella aestuarii

class: Actinobacteria

order: Actinomycetales

description: Zhihengliuella aestuarii strain DY66 16S ribosomal RNA gene, partial sequence

description: Neomicrococcus aestuarii gene for 16S ribosomal RNA, partial sequence.

description: ASM1420113v1 assembly for Neomicrococcus aestuarii DSM 105783

description: ASM3953209v1 assembly for Neomicrococcus aestuarii JCM 16364


class: Epsilonproteobacteria

description: domain/bacteria

family: Campylobacteraceae

full scientific name: Campylobacter jejuni (Jones et al. 1931) Véron and Chatelain 1973 (Approved Lists 1980)

genus: Campylobacter

order: Campylobacterales

species: Campylobacter jejuni

synonym: Vibrio jejuni


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas deceptionensis Carrión et al. 2011

genus: Pseudomonas

species: Pseudomonas deceptionensis

order: Burkholderiales

description: Pseudomonas deceptionensis partial 16S rRNA gene, isolate Isolate 9.1


description: domain/bacteria

full scientific name: Zhongshania borealis (Jang et al. 2011) Lo et al. 2014

genus: Zhongshania

species: Zhongshania borealis

synonym: Spongiibacter borealis

description: Spongiibacter borealis strain CL-AS9 16S ribosomal RNA gene, partial sequence

description: ASM3953962v1 assembly for Zhongshania borealis JCM 17304


class: Chroococcophyceae

description: domain/bacteria

family: Oscillatoriaceae

full scientific name: Planktothricoides raciborskii Suda et al. 2002

genus: Planktothricoides

keyword: phylum/cyanobacteriota

order: Oscillatoriales

phylum: Cyanobacteriota

species: Planktothricoides raciborskii

class: Cyanophyceae

family: Microcoleaceae

phylum: Cyanobacteria


description: domain/bacteria

family: Paenibacillaceae

full scientific name: <I>Cohnella</I> Kämpfer et al. 2006

genus: Cohnella

order: Caryophanales

phylum: Bacillota

species: Cohnella sp.

full scientific name: Cohnella sp.

order: Bacillales

phylum: Firmicutes

description: Cohnella soli strain 5GH36-9 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Lachnospiraceae

full scientific name: <I>Blautia</I> Liu et al. 2008

genus: Blautia

order: Eubacteriales

species: Blautia sp.

full scientific name: Blautia sp.

order: Clostridia, not assigned to order

description: Unknown acetogenic bacteria 16S rRNA gene


description: domain/bacteria

family: Cytobacillaceae

full scientific name: Cytobacillus kochii (Seiler et al. 2012) Patel and Gupta 2020

genus: Cytobacillus

species: Cytobacillus kochii

synonym: Bacillus kochii

family: Bacillaceae


description: domain/bacteria

family: Desulfurellaceae

full scientific name: <I>Hippea</I> Miroshnichenko et al. 1999

genus: Hippea

order: Desulfurellales

species: Hippea sp.

full scientific name: Hippea sp.

description: Hippea sp. KM1 partial 16S rRNA gene, strain KM1

description: ASM52619v1 assembly for Hippea sp. KM1


class: Methanobacteria

description: domain/archaea

family: Methanobacteriaceae

full scientific name: Methanobacterium lacus Borrel et al. 2012

genus: Methanobacterium

order: Methanobacteriales

phylum: Methanobacteriota

species: Methanobacterium lacus

phylum: Euryarchaeota


description: domain/bacteria

full scientific name: Peribacillus deserti (Zhang et al. 2012) Patel and Gupta 2020

genus: Peribacillus

species: Peribacillus deserti

synonym: Paraperibacillus deserti

synonym: Bacillus deserti

description: Bacillus deserti strain ZLD-8 16S ribosomal RNA gene, partial sequence

description: ASM1690917v1 assembly for Peribacillus deserti DSM 105482

description: ASM4268572v1 assembly for Peribacillus deserti KCTC 13246


class: Bacteroidia

description: domain/bacteria

family: Dysgonomonadaceae

full scientific name: Dysgonomonas oryzarvi Kodama et al. 2012

genus: Dysgonomonas

order: Bacteroidales

phylum: Bacteroidota

species: Dysgonomonas oryzarvi

phylum: Bacteroidetes

description: Dysgonomonas oryzarvi gene for 16S rRNA, partial sequence


description: domain/bacteria

family: Oceanospirillaceae

full scientific name: <I>Marinospirillum</I> Satomi et al. 1998

genus: Marinospirillum

order: Oceanospirillales

species: Marinospirillum sp.

full scientific name: Marinospirillum sp.

strain designation: ANL-isoa

description: Marinospirillum sp. ANL-isoa 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

strain designation: WF-S

description: Oceanospirillaceae bacterium WF-S 16S ribosomal RNA gene, partial sequence


description: domain/bacteria


description: domain/bacteria

description: Gamma proteobacterium E-292 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus danieliae Clavel et al. 2013

genus: Streptococcus

order: Lactobacillales

species: Streptococcus danieliae

description: Streptococcus danieliae 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Oscillospiraceae

full scientific name: Intestinimonas butyriciproducens Kläring et al. 2013

genus: Intestinimonas

species: Intestinimonas butyriciproducens

description: Intestinimonas butyriciproducens AP4 16S ribosomal RNA gene, partial sequence


class: Planctomycetia

description: domain/bacteria

family: Pirellulaceae

full scientific name: <I>Rhodopirellula</I> Schlesner et al. 2004

genus: Rhodopirellula

order: Pirellulales

phylum: Planctomycetota

species: Rhodopirellula sp.

synonym: Neorhodopirellula

synonym: Aporhodopirellula

synonym: Allorhodopirellula

full scientific name: Rhodopirellula sp.

order: Planctomycetales

phylum: Planctomycetes

description: Rhodopirellula sp. 1ILRT 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Rhodopirellula sp. 1MLRT 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Rhodopirellula sp. 4ML30 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Rhodopirellula sp. 5IL30 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Microbacteriaceae

full scientific name: Galbitalea soli Kim et al. 2014

genus: Galbitalea

species: Galbitalea soli

phylum: Actinobacteria

description: Galbitalea soli strain KIS82-1 16S ribosomal RNA gene, partial sequence

description: ASM1341052v1 assembly for Galbitalea soli DSM 105515

description: ASM1068672v1 assembly for Galbitalea soli NBRC 108727


description: domain/bacteria

full scientific name: Frondihabitans sucicola Kim et al. 2014

genus: Frondihabitans

species: Frondihabitans sucicola

description: Frondihabitans sucicola strain GRS42 16S ribosomal RNA gene, partial sequence

description: ASM3029661v1 assembly for Frondihabitans sucicola NBRC 108728


description: domain/bacteria

family: Actinomycetaceae

full scientific name: Actinomyces haliotis Hyun et al. 2014

genus: Actinomyces

species: Actinomyces haliotis

description: Actinomyces haliotis strain WL80 from South Korea 16S ribosomal RNA gene, partial sequence

description: ASM1535576v1 assembly for Actinomyces haliotis JCM 18848


description: domain/bacteria

family: Promicromonosporaceae

full scientific name: Luteimicrobium xylanilyticum Kim et al. 2014

genus: Luteimicrobium

species: Luteimicrobium xylanilyticum

description: Luteimicrobium xylanilyticum strain W-15 16S ribosomal RNA gene, partial sequence

description: ASM3954262v1 assembly for Luteimicrobium xylanilyticum JCM 18090


description: domain/bacteria

family: Halomonadaceae

full scientific name: <I>Salinicola</I> Anan'ina et al. 2008

genus: Salinicola

phylum: Pseudomonadota

species: Salinicola sp.

full scientific name: Salinicola sp.


description: domain/bacteria

family: Nocardioidaceae

full scientific name: Nocardioides soli Sun et al. 2014

genus: Nocardioides

order: Propionibacteriales

species: Nocardioides soli

description: Nocardioides soli strain mbc-2 16S ribosomal RNA gene, partial sequence

description: ASM1419149v1 assembly for Nocardioides soli DSM 105498


description: domain/bacteria

full scientific name: Microbacterium kyungheense Kook et al. 2014

genus: Microbacterium

order: Micrococcales

species: Microbacterium kyungheense

description: Microbacterium kyungheense strain THG-C26 16S ribosomal RNA gene, partial sequence

description: ASM678390v1 assembly for Microbacterium kyungheense DSM 105492

description: ASM3954424v1 assembly for Microbacterium kyungheense JCM 18735


description: domain/bacteria

full scientific name: Microbacterium jejuense Kook et al. 2014

species: Microbacterium jejuense

order: Actinomycetales

description: Microbacterium jejuense strain THG-C31 16S ribosomal RNA gene, partial sequence

description: ASM3954422v1 assembly for Microbacterium jejuense JCM 18734


description: domain/bacteria

full scientific name: Conyzicola lurida Kim et al. 2014

genus: Conyzicola

species: Conyzicola lurida

full scientific name: Conyzicola lurida Kim et al. 2014 emend. Gu et al. 2017

description: Conyzicola lurida strain HWE2-01 16S ribosomal RNA gene, partial sequence

description: ASM1420493v1 assembly for Conyzicola lurida DSM 105784


description: domain/bacteria

family: Caryophanaceae

full scientific name: Chryseomicrobium aureum Deng et al. 2014

genus: Chryseomicrobium

species: Chryseomicrobium aureum

description: Chryseomicrobium aureum strain BUT-2 16S ribosomal RNA gene, partial sequence

description: ASM1690915v1 assembly for Chryseomicrobium aureum DSM 105437


class: Alphaproteobacteria

description: domain/bacteria

family: Parvularculaceae

full scientific name: Amphiplicatus metriothermophilus Zhang et al. 2014

genus: Amphiplicatus

order: Parvularculales

species: Amphiplicatus metriothermophilus

phylum: Proteobacteria

description: Amphiplicatus metriothermophilus strain GU51 16S ribosomal RNA gene, partial sequence

description: IMG-taxon 2737472027 annotated assembly for Amphiplicatus metriothermophilus CGMCC 1.12710

description: ASM1419949v1 assembly for Amphiplicatus metriothermophilus DSM 105738


description: domain/bacteria

family: Campylobacteraceae

full scientific name: Campylobacter corcagiensis Koziel et al. 2014

genus: Campylobacter

order: Campylobacterales

species: Campylobacter corcagiensis

description: Campylobacter corcagiensis strain CIT 045 16S ribosomal RNA gene, partial sequence

description: ASM1320164v1 assembly for Campylobacter corcagiensis LMG 27932

description: Ccorc1.0 assembly for Campylobacter corcagiensis CIT 045


description: domain/bacteria

family: Odoribacteraceae

genus: Butyricimonas

species: Butyricimonas paravirosa

full scientific name: Butyricimonas paravirosa Sakamoto et al. 2014 emend. Le Roy et al. 2019

description: Butyricimonas paravirosa gene for 16S ribosomal RNA, partial sequence, strain: 214-4

description: ASM1464735v1 assembly for Butyricimonas paravirosa JCM 18677

description: ASM1192784v1 assembly for Butyricimonas paravirosa DSM 105722

assembly level: chromosome

description: ASM3287895v1 assembly for Butyricimonas paravirosa DSM 105722


description: domain/bacteria

full scientific name: Butyricimonas faecihominis Sakamoto et al. 2014

species: Butyricimonas faecihominis


description: domain/bacteria

full scientific name: Campylobacter fetus subsp. testudinum Fitzgerald et al. 2014

species: Campylobacter fetus subsp. testudinum

description: ASM2073558v1 assembly for Campylobacter fetus subsp. testudinum FDAARGOS_1591

description: Campylobacter fetus subsp. testudinum strain FDAARGOS_1591


description: domain/bacteria

family: Dermabacteraceae

full scientific name: Brachybacterium ginsengisoli Hoang et al. 2014

genus: Brachybacterium

species: Brachybacterium ginsengisoli

description: Brachybacterium ginsengisoli strain DCY80 16S ribosomal RNA gene, partial sequence

description: ASM240706v1 assembly for Brachybacterium ginsengisoli DCY80


description: domain/bacteria

family: Bacillaceae

full scientific name: Peribacillus huizhouensis (Li et al. 2014) Patel and Gupta 2020

genus: Peribacillus

species: Peribacillus huizhouensis

synonym: Bacillus huizhouensis

description: Peribacillus huizhouensis strain GSS03 16S ribosomal RNA gene, partial sequence

description: ASM1413860v1 assembly for Peribacillus huizhouensis DSM 105481


description: domain/bacteria

family: Yersiniaceae

full scientific name: <I>Serratia</I> Bizio 1823 (Approved Lists 1980)

genus: Serratia

order: Enterobacterales

species: Serratia sp.

full scientific name: Serratia sp.

order: Enterobacteriales, not validated


description: domain/bacteria

description: Serratia sp. S119(2009) 16S ribosomal RNA gene, partial sequence

description: ASM198456v1 assembly for Serratia sp. S119


description: domain/bacteria

full scientific name: Salimicrobium jeotgali Choi et al. 2014

genus: Salimicrobium

order: Caryophanales

species: Salimicrobium jeotgali

order: Bacillales

description: Salimicrobium jeotgali strain MJ3 16S ribosomal RNA gene, partial sequence

description: ASM168543v3 assembly for Salimicrobium jeotgali MJ3

description: ASM1690909v1 assembly for Salimicrobium jeotgali DSM 105371

description: ASM29929v2 assembly for Salimicrobium jeotgali MJ3


description: domain/bacteria

family: Methylococcaceae

full scientific name: Methyloprofundus sedimenti Tavormina et al. 2015

genus: Methyloprofundus

order: Methylococcales

species: Methyloprofundus sedimenti

strain designation: WF1, whale fall 1

description: Methyloprofundus sedimenti strain WF1 16S ribosomal RNA gene, partial sequence

description: ASM207295v1 assembly for Methyloprofundus sedimenti WF1


description: domain/bacteria

family: Nitrobacteraceae

full scientific name: <I>Tardiphaga</I> De Meyer et al. 2012

genus: Tardiphaga

order: Hyphomicrobiales

species: Tardiphaga sp.

full scientific name: Tardiphaga sp.

order: Rhizobiales


description: domain/bacteria

family: Vibrionaceae

full scientific name: Photobacterium piscicola Figge et al. 2015

genus: Photobacterium

order: Vibrionales

species: Photobacterium piscicola

order: Vibrionales, not validated

description: Photobacterium sp. NCCB 100098 16S ribosomal RNA gene, complete sequence

description: P.piscicola_NCCB100098T_SPAdes_Prokka_EMBL assembly for Photobacterium piscicola type strain: NCCB 100098


class: Betaproteobacteria

description: domain/bacteria

family: Rhodocyclaceae

full scientific name: Propionivibrio militaris Thrash et al. 2025

genus: Propionivibrio

order: Rhodocyclales

species: Propionivibrio militaris

full scientific name: Propionivibrio militaris Thrash et al. 2010

strain designation: MP

description: Propionivibrio militaris strain MP 16S ribosomal RNA gene, partial sequence

description: Propionivibrio militaris MP


description: domain/bacteria

family: Roseobacteraceae

full scientific name: Phaeobacter porticola Breider et al. 2017

genus: Phaeobacter

order: Rhodobacterales

species: Phaeobacter porticola

family: Rhodobacteraceae

description: Phaeobacter porticola strain P97 16S ribosomal RNA gene, partial sequence

description: ASM188818v1 assembly for Phaeobacter porticola P97


description: domain/bacteria

description: Phaeobacter porticola strain P100 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Phaeobacter porticola strain P104 16S ribosomal RNA gene, partial sequence


class: Clostridia

description: domain/bacteria

family: Thermoanaerobacteraceae

full scientific name: Thermoanaerobacterium butyriciformans López et al. 2019

genus: Thermoanaerobacterium

order: Thermoanaerobacterales

species: Thermoanaerobacterium butyriciformans

order: Clostridiales

description: Thermoanaerobacterium sp. USBA-019 16S ribosomal RNA gene, partial sequence

description: ASM1787454v1 assembly for Thermoanaerobacterium butyriciformans DSM 101588


description: domain/bacteria

family: Pleomorphomonadaceae

full scientific name: Methylobrevis pamukkalensis Poroshina et al. 2015

genus: Methylobrevis

species: Methylobrevis pamukkalensis

description: Methylobrevis pamukkalensis strain PK2 16S ribosomal RNA gene, partial sequence

description: MpPK2_01 assembly for Methylobrevis pamukkalensis PK2


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus cameli Kadri et al. 2015

genus: Streptococcus

order: Lactobacillales

species: Streptococcus cameli

strain designation: Vandamme R-51051, Zaina MR-1951

description: Streptococcus cameli strain CCMM B834 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Mameliella alba Zheng et al. 2010

genus: Mameliella

species: Mameliella alba

synonym: Mameliella atlantica

synonym: Ponticoccus lacteus

synonym: Alkalimicrobium pacificum

synonym: Antarctobacter alba

synonym: Mameliella phaeodactyli

full scientific name: Mameliella alba Zheng et al. 2010 emend. Liu et al. 2018

description: Mameliella alba strain KD53 16S ribosomal RNA gene, partial sequence

description: ASM221115v1 assembly for Mameliella alba KD53

description: Mameliella alba strain DSM 106184

description: Mameliella phaeodactyli DSM 106184


description: domain/bacteria

full scientific name: Roseovarius antarcticus Deng et al. 2015

genus: Roseovarius

species: Roseovarius antarcticus

description: Roseovarius antarcticus strain DSM 102249 type 16S ribosomal RNA gene, partial sequence

description: Roseovarius antarcticus strain M-S13-148 16S ribosomal RNA gene, partial sequence

description: Roseovarius sp. M-S13-148 16S ribosomal RNA gene, partial sequence


class: Sphingobacteriia

description: domain/bacteria

family: Sphingobacteriaceae

full scientific name: Sphingobacterium cellulitidis Huys et al. 2017

genus: Sphingobacterium

order: Sphingobacteriales

species: Sphingobacterium cellulitidis

synonym: Sphingobacterium soli

full scientific name: Sphingobacterium soli Fu et al. 2017

order: Flavobacteriales

species: Sphingobacterium soli

description: Sphingobacterium sp. NCCP-698 gene for 16S ribosomal RNA, partial sequence

description: ASM1413855v1 assembly for Sphingobacterium cellulitidis DSM 101679

description: ASM1464433v1 assembly for Sphingobacterium cellulitidis CGMCC 1.15966


class: Flavobacteriia

description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Mesonia hippocampi Kolberg et al. 2015

genus: Mesonia

species: Mesonia hippocampi

description: Mesonia hippocampi strain 96_Hippo_TS_3/13 16S ribosomal RNA gene, partial sequence

description: Mesonia hippocampi strain CCM 8557 16S ribosomal RNA gene, partial sequence.

description: ASM1419744v1 assembly for Mesonia hippocampi DSM 29568


description: domain/bacteria

family: Lacipirellulaceae

full scientific name: Bythopirellula goksoeyrii corrig. Storesund and Øvreås 2021

genus: Bythopirellula

order: Pirellulales

species: Bythopirellula goksoeyrii

synonym: Bythopirellula goksoyri

full scientific name:
Bythopirellula goksoeyrii J. E. Storesund
Lise Ovreas

description: Bythopirellula goksoyri strain Pr1d 16S ribosomal RNA gene, partial sequence

description: ASM806511v1 assembly for Bythopirellula goksoeyrii Pr1d


class: Spirochaetia

description: domain/bacteria

family: Spirochaetaceae

full scientific name: Spirochaeta lutea Shivani et al. 2015

genus: Spirochaeta

order: Spirochaetales

phylum: Spirochaetota

species: Spirochaeta lutea

class: Spirochaetes

description: Spirochaeta lutea partial 16S rRNA gene, type strain JC230T

description: Spiroch1.0 assembly for Spirochaeta lutea JC230


description: domain/bacteria

family: Aphanizomenaceae

full scientific name: <I>Anabaena</I> Bory ex Bornet and Flahault 1886

genus: Anabaena

order: Nostocales

species: Anabaena sp.

class: Hormogoneae

family: Nostocaceae

full scientific name: Anabaena sp.


full scientific name: Cyanocohniella  rudolphia

genus: Cyanocohniella

order: Not assigned to order

species: Cyanocohniella rudolphia


class: Deinococci

description: domain/bacteria

family: Deinococcaceae

full scientific name: Deinococcus metallilatus Kim et al. 2015

genus: Deinococcus

order: Deinococcales

phylum: Deinococcota

species: Deinococcus metallilatus

phylum: Deinococcus-Thermus

description: Deinococcus metallilatus strain MA1002 16S ribosomal RNA gene, partial sequence

description: ASM475860v1 assembly for Deinococcus metallilatus MA1002

description: ASM1420209v1 assembly for Deinococcus metallilatus DSM 105434

description: ASM411594v1 assembly for Deinococcus metallilatus MA1002


description: domain/bacteria

full scientific name: Deinococcus carri Kim et al. 2015

species: Deinococcus carri

description: Deinococcus carri strain MA1003 16S ribosomal RNA gene, partial sequence

description: ASM3954505v1 assembly for Deinococcus carri NBRC 110142


description: domain/bacteria

family: Weeksellaceae

full scientific name: Chryseobacterium limigenitum Kämpfer et al. 2015

genus: Chryseobacterium

species: Chryseobacterium limigenitum

description: Chryseobacterium limigenitum partial 16S rRNA gene, type strain SUR2T

description: IMG-taxon 2654587896 annotated assembly for Chryseobacterium limigenitum SUR2

description: ASM4054532v1 assembly for Chryseobacterium limigenitum DSM 100052


description: domain/bacteria

family: Sphaerotilaceae

full scientific name: Aquabacterium olei Pham et al. 2015

genus: Aquabacterium

order: Burkholderiales

species: Aquabacterium olei

family: Comamonadaceae

description: Aquabacterium olei strain NHI-1 16S ribosomal RNA gene, partial sequence

description: ASM310039v1 assembly for Aquabacterium olei NBRC 110486


class: Gammaproteobacteria

description: domain/bacteria

family: Cellvibrionaceae

full scientific name: <I>Pseudoteredinibacter</I> Chen et al. 2011

genus: Pseudoteredinibacter

order: Cellvibrionales

species: Pseudoteredinibacter sp.

full scientific name: Pseudoteredinibacter sp.

order: Alteromonadales


description: domain/bacteria

full scientific name: Empedobacter stercoris Schauss et al. 2015

genus: Empedobacter

species: Empedobacter stercoris

description: Empedobacter stercoris strain 990B6_12ER2A 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Beijerinckiaceae

full scientific name: Methylocapsa palsarum Dedysh et al. 2015

genus: Methylocapsa

order: Hyphomicrobiales

species: Methylocapsa palsarum

order: Rhizobiales

description: Methylocapsa palsarum strain NE2 16S ribosomal RNA gene, partial sequence

description: IMG-taxon 2675903028 annotated assembly for Methylocapsa palsarum NE2


class: Bacilli

description: domain/bacteria

family: Bacillaceae

full scientific name: Aureibacillus halotolerans Liu et al. 2015

genus: Aureibacillus

order: Caryophanales

species: Aureibacillus halotolerans

description: Aureibacillus halotolerans strain S1203 16S ribosomal RNA gene, partial sequence

description: ASM436304v1 assembly for Aureibacillus halotolerans DSM 28697


description: domain/bacteria

full scientific name: Chryseobacterium sediminis Kämpfer et al. 2015

species: Chryseobacterium sediminis

description: Chryseobacterium sediminis strain IMT-174 16S ribosomal RNA gene, partial sequence

description: ASM838650v1 assembly for Chryseobacterium sediminis IMT-174


description: domain/bacteria

family: Calotrichaceae

full scientific name: <I>Calothrix</I> Agardh ex Bornet and Flahault 1886

genus: Calothrix

species: Calothrix sp.

synonym: Calothrix

synonym: Rivulariopsis

full scientific name: Calothrix sp.


description: domain/bacteria

family: Rivulariaceae

full scientific name: Nunduva britannica Hauer 2018

genus: Nunduva

species: Nunduva britannica


description: domain/bacteria

family: Synechococcaceae

full scientific name: <I>Synechococcus</I> Nägeli 1849

genus: Synechococcus

order: Synechococcales

species: Synechococcus sp.

synonym: Synechococcus

full scientific name: Synechococcus sp.


description: domain/bacteria

full scientific name: Cyanobium gracile Rippka and Cohen-Bazire 1983

genus: Cyanobium

species: Cyanobium gracile

full scientific name: Cyanobium gracile

description: ASM1903846v1 assembly for Synechococcus sp. CCY 0621


description: domain/bacteria

family: Prochlorococcaceae

full scientific name: <I>Parasynechococcus</I> Coutinho et al. 2020

genus: Parasynechococcus

species: Parasynechococcus sp.

full scientific name: Parasynechococcus sp.


description: domain/bacteria

description: ASM1903841v1 assembly for Synechococcus sp. CCY 9618


description: domain/bacteria


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Paenibacillus ripae Sun et al. 2015

genus: Paenibacillus

species: Paenibacillus ripae

order: Bacillales

description: Paenibacillus ripae strain HZ1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Rikenellaceae

full scientific name: Alistipes inops Shkoporov et al. 2015

genus: Alistipes

order: Bacteroidales

species: Alistipes inops

description: ASM78657v1 assembly for Alistipes inops 627


description: domain/bacteria

family: Barnesiellaceae

full scientific name: Coprobacter secundus Shkoporov et al. 2015

genus: Coprobacter

species: Coprobacter secundus

synonym: Gabonia massiliensis

description: Coprobacter secundus strain 177 16S ribosomal RNA gene, partial sequence

description: ASM80310v2 assembly for Coprobacter secundus 177


class: Fusobacteriia

description: domain/bacteria

family: Fusobacteriaceae

full scientific name: Hypnocyclicus thermotrophus Roalkvam et al. 2015

genus: Hypnocyclicus

keyword: phylum/fusobacteriota

order: Fusobacteriales

phylum: Fusobacteriota

species: Hypnocyclicus thermotrophus

phylum: Fusobacteria

description: Hypnocyclicus thermotrophus strain IR-2 16S ribosomal RNA gene, partial sequence

description: ASM436557v1 assembly for Hypnocyclicus thermotrophus DSM 100055


description: domain/bacteria

family: Sphaerochaetaceae

full scientific name: Sphaerochaeta associata Troshina et al. 2015

genus: Sphaerochaeta

species: Sphaerochaeta associata

phylum: Spirochaetes

description: Sphaerochaeta associata strain GLS2 16S ribosomal RNA gene, partial sequence

description: ASM2286916v1 assembly for Sphaerochaeta associata GLS2T

description: IMG-taxon 2706794916 annotated assembly for Sphaerochaeta associata GLS2


description: domain/bacteria

family: Erythrobacteraceae

full scientific name: <I>Altererythrobacter</I> Kwon et al. 2007

genus: Altererythrobacter

order: Sphingomonadales

species: Altererythrobacter sp.

synonym: Aestuarierythrobacter

full scientific name: Altererythrobacter sp.

description: Erythromicrobium sp. AMV10 partial 16S rRNA gene, strain AMV10


description: domain/bacteria

family: Bartonellaceae

full scientific name: <I>Nitratireductor</I> Labbé et al. 2004

genus: Nitratireductor

species: Nitratireductor sp.

family: Phyllobacteriaceae

full scientific name: Nitratireductor sp.


description: domain/bacteria

description: Nitratireductor sp. SL014B-25A2 16S ribosomal RNA gene, partial sequence


class: Actinomycetes

description: domain/bacteria

family: Intrasporangiaceae

full scientific name: <I>Phycicoccus</I> Lee 2006

genus: Phycicoccus

order: Micrococcales

phylum: Actinomycetota

species: Phycicoccus sp.

class: Actinobacteria

full scientific name: Phycicoccus sp.

order: Actinomycetales

description: Phycicoccus aerolatum strain 5413S-25 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Phycicoccus sp. YC6719 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Phycicoccus sp. GT-36 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Microbacteriaceae

full scientific name: <I>Microterricola</I> Matsumoto et al. 2008

genus: Microterricola

species: Microterricola sp.

synonym: Phycicola

full scientific name: Phycicola sp.

genus: Phycicola

species: Phycicola sp.


description: domain/bacteria

full scientific name: <I>Nostocoides</I> Deshmukh and Oren 2024

genus: Nostocoides

species: Nostocoides sp.

synonym: Tetrasphaera

full scientific name: Tetrasphaera sp.

genus: Tetrasphaera

species: Tetrasphaera sp.

description: Tetrasphaera sp. YC6726 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus panodentis Okamoto et al. 2016

genus: Streptococcus

order: Lactobacillales

phylum: Bacillota

species: Streptococcus panodentis

phylum: Firmicutes

description: Streptococcus panodentis gene for 16S ribosomal RNA, partial sequence, strain: TKU50

description: ASM1788400v1 assembly for Streptococcus panodentis CCUG 70867


description: domain/bacteria

full scientific name: Streptococcus oricebi Saito et al. 2016

species: Streptococcus oricebi

description: Streptococcus oricebi gene for 16S ribosomal RNA, partial sequence

description: Streptococcus oricebi JCM 30719 gene for 16S rRNA, partial sequence.

description: ASM1788398v1 assembly for Streptococcus oricebi CCUG 70868


description: domain/bacteria

family: Zoogloeaceae

full scientific name: Niveibacterium umoris Chun et al. 2016

genus: Niveibacterium

order: Rhodocyclales

species: Niveibacterium umoris

family: Rhodocyclaceae

description: Niveibacterium umoris strain MIC2059 16S ribosomal RNA gene, partial sequence

description: ASM1731147v1 assembly for Niveibacterium umoris KACC 17062

description: ASM1419701v1 assembly for Niveibacterium umoris DSM 106739

description: ASM3954418v1 assembly for Niveibacterium umoris JCM 18716