description: domain/bacteria

family: Sulfuricellaceae

full scientific name: Sulfurimicrobium lacus Kojima et al. 2021

genus: Sulfurimicrobium

order: Spirillales

species: Sulfurimicrobium lacus

full scientific name: Sulfurimicrobium lacus Kojima et al. 2020

order: Nitrosomonadales

description: Sulfurimicrobium lacus skT11 gene for 16S ribosomal RNA, partial sequence

description: ASM1176458v1 assembly for Sulfurimicrobium lacus skT11


Matching level: species

class: Clostridia

description: domain/bacteria

domain: Bacteria

family: Lachnospiraceae

full scientific name: Butyribacter intestini Zou et al. 2021

genus: Butyribacter

keyword: phylum/bacillota

order: Eubacteriales

phylum: Bacillota

species: Butyribacter intestini

phylum: Firmicutes

type strain: yes


class: Bacilli

description: domain/bacteria

family: Bacillaceae

full scientific name: Calidifontibacillus erzurumensis Adiguzel et al. 2020

genus: Calidifontibacillus

order: Caryophanales

species: Calidifontibacillus erzurumensis

assembly level: contig

description: ASM1330312v1 assembly for Calidifontibacillus erzurumensis P2


class: Fusobacteriia

description: domain/bacteria

family: Fusobacteriaceae

full scientific name: Fusobacterium plautii corrig. Séguin 1928 (Approved Lists 1980)

genus: Fusobacterium

keyword: phylum/fusobacteriota

order: Fusobacteriales

phylum: Fusobacteriota

species: Fusobacterium plautii

synonym: Fusobacterium plauti

synonym: Clostridium orbiscindens

synonym: Eubacterium plautii

synonym: Flavonifractor plautii

family: Oscillospiraceae

full scientific name: Flavonifractor plautii (Séguin 1928) Carlier et al. 2010

genus: Flavonifractor

species: Flavonifractor plautii

type strain: no

database: nuccore

description: Flavonifractor plautii strain ClaCZ140 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Eubacteriaceae

full scientific name: <I>Eubacterium</I> Prévot 1938 (Approved Lists 1980)

genus: Eubacterium

species: Eubacterium sp.

full scientific name: Eubacterium sp.

description: Clostridiales bacterium 65-2a 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Brevibacillus migulae Niu et al. 2020

genus: Brevibacillus

species: Brevibacillus migulae

description: Brevibacillus sp. CFH S0501 16S ribosomal RNA gene, partial sequence.

description: ASM452191v1 assembly for Brevibacillus migulae CFH S0501


class: Actinomycetes

description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: Bifidobacterium panos Neuzil-Bunesova et al. 2021

genus: Bifidobacterium

keyword: phylum/actinomycetota

order: Bifidobacteriales

phylum: Actinomycetota

species: Bifidobacterium panos

class: Actinobacteria

phylum: Actinobacteria

description: ASM1293244v1 assembly for Bifidobacterium panos DSM 109963


description: domain/bacteria

full scientific name: Bacillus coreaensis Chi et al. 2015

genus: Bacillus

species: Bacillus coreaensis

description: Bacillus sp. MS5 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Bifidobacterium saimiriisciurei Modesto et al. 2025

species: Bifidobacterium saimiriisciurei

synonym: Bifidobacterium saimiriisciurei

full scientific name: Bifidobacterium saimiriisciurei Modesto et al. 2020

description: Bifidobacterium saimiriisciurei strain SMA1 16S ribosomal RNA gene, partial sequence

assembly level: scaffold

description: ASM1066765v1 assembly for Bifidobacterium saimiriisciurei SMA1


class: Flavobacteriia

description: domain/bacteria

family: Flavobacteriaceae

full scientific name: <I>Flavobacterium</I> Bergey et al. 1923 (Approved Lists 1980)

genus: Flavobacterium

keyword: phylum/bacteroidota

order: Flavobacteriales

phylum: Bacteroidota

species: Flavobacterium sp.

full scientific name: Flavobacterium sp.

phylum: Bacteroidetes

description: ASM230400v1 assembly for Flavobacterium sp. ACN6


description: domain/bacteria

description: ASM230388v1 assembly for Flavobacterium sp. ACN2


class: Alphaproteobacteria

description: domain/bacteria

family: Roseobacteraceae

full scientific name: Litoreibacter roseus Kanamuro et al. 2021

genus: Litoreibacter

keyword: phylum/pseudomonadota

order: Rhodobacterales

phylum: Pseudomonadota

species: Litoreibacter roseus

family: Rhodobacteraceae

phylum: Proteobacteria

description: ASM981179v1 assembly for Litoreibacter roseus K6


description: domain/bacteria

full scientific name: Alloscardovia theropitheci Modesto et al. 2019

genus: Alloscardovia

species: Alloscardovia theropitheci

strain designation: GLDI 4/2, GLDI4/2

description: Alloscardovia theropitheci 16S ribosomal RNA gene, partial sequence

description: ASM433229v1 assembly for Alloscardovia theropitheci GLDI4/2


class: Erysipelotrichia

description: domain/bacteria

family: Erysipelotrichaceae

full scientific name: Amedibacterium intestinale Ikeyama et al. 2020

genus: Amedibacterium

order: Erysipelotrichales

species: Amedibacterium intestinale

synonym: Absiella argi

description: Amedibacterium intestinale 9CBEGH2 gene for 16S ribosomal RNA, partial sequence

assembly level: complete

description: ASM1053733v1 assembly for Amedibacterium intestinale 9CBEGH2


description: domain/bacteria

family: Clostridiaceae

full scientific name: Clostridium innocuum Smith and King 1962 (Approved Lists 1980)

genus: Clostridium

species: Clostridium innocuum

description: [Clostridium] innocuum strain ClaCZ133 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Clostridium paraputrificum (Bienstock 1906) Snyder 1936 (Approved Lists 1980)

species: Clostridium paraputrificum

synonym: Bacillus paraputrificus

description: Clostridium paraputrificum strain ClaCZ230 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: <I>Clostridium</I> Prazmowski 1880 (Approved Lists 1980)

species: Clostridium sp.

synonym: Pseudoclostridium

synonym: Lachnoclostridium

synonym: Anaerobacter

synonym: Inflabilis

synonym: Thomasclavelia

synonym: Erysipelatoclostridium

full scientific name: Clostridium sp.


description: domain/bacteria

description: Clostridium sp. TG60-1 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Clostridium sp. TG60-81 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

full scientific name: Clostridium muellerianum Doyle et al. 2022

species: Clostridium muellerianum

full scientific name: Clostridium muellerianum

description: Clostridium muellerianum strain P21 16S ribosomal RNA gene, partial sequence

description: ASM1292652v1 assembly for Clostridium muellerianum P21


description: domain/bacteria

full scientific name: Clostridium tertium (Henry 1917) Bergey et al. 1923 (Approved Lists 1980)

species: Clostridium tertium

synonym: Bacillus tertius

description: Clostridium tertium strain ClaCZ234 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Caldibacillus pasinlerensis (Baltaci et al. 2020) Gupta et al. 2020

genus: Caldibacillus

species: Caldibacillus pasinlerensis

synonym: Bacillus pasinlerensis

synonym: Pallidibacillus pasinlerensis

description: Pallidibacillus pasinlerensis strain P1 16S ribosomal RNA gene, partial sequence

description: ASM999684v1 assembly for Pallidibacillus pasinlerensis P1


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium glutamicum (Kinoshita et al. 1958) Abe et al. 1967 (Approved Lists 1980)

genus: Corynebacterium

order: Mycobacteriales

species: Corynebacterium glutamicum

synonym: Corynebacterium lilium

synonym: Brevibacterium divaricatum

synonym: Micrococcus glutamicus

full scientific name: Corynebacterium glutamicum (Kinoshita et al. 1958) Abe et al. 1967 emend. Nouioui et al. 2018


description: domain/bacteria

family: Micrococcaceae

full scientific name: Rothia nasisuis Schlattmann et al. 2018

genus: Rothia

order: Micrococcales

species: Rothia nasisuis

description: Rothia nasisuis strain 1a5R-CH16 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: <I>Corynebacterium</I> Lehmann and Neumann 1896 (Approved Lists 1980)

species: Corynebacterium sp.

synonym: Turicella

synonym: Bacterionema

synonym: Caseobacter

full scientific name: Corynebacterium sp.

description: Corynebacterium endometrii strain 2069/2 16S ribosomal RNA gene, partial sequence


Matching level: subspecies

description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lacticaseibacillus paracasei subsp. paracasei (Collins et al. 1989) Zheng et al. 2020

genus: Lacticaseibacillus

order: Lactobacillales

synonym: Lactobacillus paracasei subsp. paracasei

strain designation: GCRL 163


description: domain/bacteria

family: Paracoccaceae

full scientific name: Gemmobacter serpentinus Lim et al. 2020

genus: Gemmobacter

species: Gemmobacter serpentinus


description: domain/bacteria

family: Propionibacteriaceae

full scientific name: <I>Brooklawnia</I> Rainey et al. 2006

genus: Brooklawnia

order: Propionibacteriales

species: Brooklawnia sp.

full scientific name: Brooklawnia sp.

description: Propionibacteriaceae bacterium SH081 gene for 16S rRNA, partial sequence


culture collection no.: DSM 103343, Marseille-P2765

description: domain/bacteria

family: Peptoniphilaceae

full scientific name: Anaerococcus mediterraneensis Diop et al. 2017

genus: Anaerococcus

order: Tissierellales

species: Anaerococcus mediterraneensis

description: Anaerococcus mediterraneensis partial 16S rRNA gene, type strain Marseille-P2765T

description: PRJEB15655 assembly for Anaerococcus mediterraneensis Marseille-P2765


description: domain/bacteria

full scientific name: Anaerotruncus massiliensis Togo et al. 2019

genus: Anaerotruncus

species: Anaerotruncus massiliensis

description: Anaerotruncus sp. AT3 partial 16S rRNA gene, strain AT3

description: PRJEB19460 assembly for Anaerotruncus massiliensis (ex Togo et al. 2019) AT3


class: Desulfovibrionia

description: domain/bacteria

family: Desulfovibrionaceae

full scientific name: <I>Desulfovibrio</I> Kluyver and van Niel 1936 (Approved Lists 1980)

genus: Desulfovibrio

keyword: phylum/thermodesulfobacteriota

order: Desulfovibrionales

phylum: Thermodesulfobacteriota

species: Desulfovibrio sp.

synonym: Desulfomonas

synonym: Aminidesulfovibrio

synonym: Psychrodesulfovibrio

synonym: Frigididesulfovibrio

synonym: Alteridesulfovibrio

class: Deltaproteobacteria

full scientific name: Desulfovibrio sp.


description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus durans (ex Sherman and Wing 1937) Collins et al. 1984

genus: Enterococcus

species: Enterococcus durans

synonym: Streptococcus durans


description: domain/bacteria

full scientific name: Enterococcus faecalis (Andrewes and Horder 1906) Schleifer and Kilpper-Bälz 1984

species: Enterococcus faecalis

synonym: Streptococcus faecalis

description: Enterococcus faecalis strain ClaCZ94 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Enterococcus faecium (Orla-Jensen 1919) Schleifer and Kilpper-Bälz 1984

species: Enterococcus faecium

synonym: Streptococcus faecium

description: Enterococcus faecium strain ClaCZ117 16S ribosomal RNA gene, partial sequence


description: domain/bacteria


description: domain/bacteria

full scientific name: Enterococcus gallinarum (Bridge and Sneath 1982) Collins et al. 1984

species: Enterococcus gallinarum

synonym: Streptococcus gallinarum

description: Enterococcus gallinarum strain ClaCZ15 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Enterococcus hirae Farrow and Collins 1985

species: Enterococcus hirae

description: Enterococcus hirae strain ClaCZ137 16S ribosomal RNA gene, partial sequence


class: Gammaproteobacteria

description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

order: Enterobacterales

species: Escherichia coli

synonym: Bacillus coli


description: domain/bacteria

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919


description: domain/bacteria

strain designation: BL21(DE3) pRham hIL-10L-H Klon 2, BL21(DE3) pRham hIL-10L-H #1351


description: domain/bacteria

strain designation: BL21(DE3) pAZ1LT7 Klon 81, BL21(DE3) pAZ1LT7 #1308


description: domain/bacteria

strain designation: BWKH 235


description: domain/bacteria

strain designation: BWKH 288

description: 2848 assembly for Escherichia coli DSM 111506


description: domain/bacteria

strain designation: BWKH 350


description: domain/bacteria

strain designation: BWKH 336


description: domain/bacteria

strain designation: BWKH 368


description: domain/bacteria

family: Sporolactobacillaceae

full scientific name: <I>Sporolactobacillus</I> Kitahara and Suzuki 1963 (Approved Lists 1980)

genus: Sporolactobacillus

species: Sporolactobacillus sp.

full scientific name: Sporolactobacillus sp.

description: Sporolactobacillus sp. 2-1-A gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Sporolactobacillus sp. 22-1-A gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Sporolactobacillus sp. 30-1 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Anaerostipes hadrus (Moore et al. 1976) Allen-Vercoe et al. 2013

genus: Anaerostipes

species: Anaerostipes hadrus

synonym: Eubacterium hadrum

description: Anaerostipes hadrus 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Bacillaceae

full scientific name: Bacillus alkalisoli Liu et al. 2019

genus: Bacillus

species: Bacillus alkalisoli

description: Bacillus solitudinis strain FJAT-45086 16S ribosomal RNA gene, partial sequence


class: Halobacteria

description: domain/archaea

domain: Archaea

family: Haloferacaceae

full scientific name: Haloferax gibbonsii Juez et al. 1986

genus: Haloferax

keyword: phylum/methanobacteriota

order: Halobacteriales

phylum: Methanobacteriota

species: Haloferax gibbonsii

order: Haloferacales

phylum: Euryarchaeota

description: Haloferax sp. strain LR2-5 16S ribosomal RNA gene, partial sequence

description: ASM1496974v1 assembly for Haloferax gibbonsii LR2-5


description: domain/bacteria

family: Nocardiaceae

full scientific name: Antrihabitans cavernicola (Lee et al. 2020) Val-Calvo and Vázquez-Boland 2024

genus: Antrihabitans

species: Antrihabitans cavernicola

synonym: Rhodococcus cavernicola

synonym: Spelaeibacter cavernicola

full scientific name: Rhodococcus cavernicola Lee et al. 2020

genus: Rhodococcus

species: Rhodococcus cavernicola

description: ASM829797v1 assembly for Antrihabitans cavernicola C1-24


description: domain/bacteria

full scientific name: Ligilactobacillus agilis (Weiss et al. 1982) Zheng et al. 2020

genus: Ligilactobacillus

species: Ligilactobacillus agilis

synonym: Lactobacillus agilis

description: Ligilactobacillus agilis strain ClaCZ26 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Lactobacillus rhamnosus (Hansen 1968) Collins et al. 1989

genus: Lactobacillus

species: Lactobacillus rhamnosus

synonym: Lacticaseibacillus rhamnosus

synonym: Lactobacillus casei subsp. rhamnosus

full scientific name: Lacticaseibacillus rhamnosus (Hansen 1968) Zheng et al. 2020

species: Lacticaseibacillus rhamnosus


description: domain/bacteria

full scientific name: Lactobacillus crispatus (Brygoo and Aladame 1953) Moore and Holdeman 1970 (Approved Lists 1980)

species: Lactobacillus crispatus

synonym: Eubacterium crispatum

full scientific name: Lactobacillus crispatus (Brygoo and Aladame 1953) Moore and Holdeman 1970 emend. Cato et al. 1983

description: Lactobacillus crispatus strain ClaCZ47 16S ribosomal RNA gene, partial sequence

description: ASM1498290v1 assembly for Lactobacillus crispatus DSM 108970


description: domain/bacteria

full scientific name: Lentilactobacillus kefiri (Kandler and Kunath 1983) Zheng et al. 2020

genus: Lentilactobacillus

species: Lentilactobacillus kefiri

synonym: Lactobacillus kefir

synonym: Lactobacillus kefiri

strain designation: SB 227a


description: domain/bacteria


description: domain/bacteria

full scientific name: Limosilactobacillus oris (Farrow and Collins 1988) Zheng et al. 2020

genus: Limosilactobacillus

species: Limosilactobacillus oris

synonym: Lactobacillus oris

description: ASM1523416v1 assembly for Limosilactobacillus oris DSM 108973


description: domain/bacteria

full scientific name: Limosilactobacillus reuteri subsp. murium Li et al. 2021

description: ASM17945v1 assembly for Limosilactobacillus reuteri subsp. murium lpuph1


description: domain/bacteria

full scientific name: <I>Lactobacillus</I> Beijerinck 1901 (Approved Lists 1980)

species: Lactobacillus sp.

full scientific name: Lactobacillus sp.


description: domain/bacteria

description: Lactobacillus sp. YIT 11364 gene for 16S rRNA, partial sequence.


description: domain/bacteria

description: Lactobacillus sp. YIT 11469 gene for 16S rRNA, partial sequence


description: domain/bacteria

family: Streptococcaceae

full scientific name: Lactococcus lactis (Lister 1873) Schleifer et al. 1986

genus: Lactococcus

species: Lactococcus lactis

synonym: Lactobacillus xylosus

synonym: Bacterium lactis

synonym: Streptococcus lactis

synonym: Streptococcus lactis subsp. diacetilactis


description: domain/bacteria

strain designation: SB 17


description: domain/bacteria

family: Listeriaceae

full scientific name: Listeria monocytogenes (Murray et al. 1926) Pirie 1940 (Approved Lists 1980)

genus: Listeria

species: Listeria monocytogenes

synonym: Bacterium monocytogenes

strain designation: FFH

description: ASM937733v1 assembly for Listeria monocytogenes FFH


description: domain/bacteria

full scientific name: Listeria monocytogenes (Murray et al. 1926) Pirie 1940

strain designation: FFL 1


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces scabichelini Gencbay et al. 2021

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces scabichelini

order: Streptomycetales

description: Streptomyces sp. strain HC44 16S ribosomal RNA gene, partial sequence

description: ASM1104501v1 assembly for Streptomyces scabichelini HC44


description: domain/bacteria

full scientific name: Nocardia bovistercoris Zhang et al. 2021

genus: Nocardia

species: Nocardia bovistercoris

description: Nocardia bovistercoris strain NEAU-351 16S ribosomal RNA gene, partial sequence

description: ASM1567485v1 assembly for Nocardia bovistercoris NEAU-351


description: domain/bacteria

family: Streptosporangiaceae

full scientific name: Microbispora rosea subsp. rosea (Nonomura and Ohara 1957) Miyadoh et al. 1991

genus: Microbispora

order: Streptosporangiales

species: Microbispora rosea subsp. rosea

synonym: Microbispora amethystogenes subsp. amethystogenes

strain designation: Belal Act3


description: domain/bacteria

family: Micrococcaceae

full scientific name: Micrococcus luteus (Schroeter 1872) Cohn 1872 (Approved Lists 1980)

genus: Micrococcus

species: Micrococcus luteus

synonym: Micrococcus yunnanensis

synonym: Bacteridium luteum

synonym: Micrococcus aloeverae

full scientific name: Micrococcus luteus (Schroeter 1872) Cohn 1872 emend. Nouioui et al. 2018

strain designation: WS 7


description: domain/bacteria

strain designation: SB 200b


description: domain/bacteria


description: domain/bacteria

full scientific name: Kocuria rosea subsp. rosea (Flügge 1886) Ghodhbane-Gtari et al. 2024

genus: Kocuria

species: Kocuria rosea subsp. rosea


description: domain/bacteria

family: Micromonosporaceae

full scientific name: <I>Micromonospora</I> Ørskov 1923 (Approved Lists 1980)

genus: Micromonospora

order: Micromonosporales

species: Micromonospora sp.

synonym: Jishengella

synonym: Xiangella

synonym: Verrucosispora

full scientific name: Micromonospora sp.


description: domain/bacteria

strain designation: SCRIPP CNS 326


description: domain/bacteria

description: Micromonospora sp. 2806702 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Micromonospora sp. EL055 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Plantactinospora alkalitolerans Carro et al. 2023

genus: Plantactinospora

species: Plantactinospora alkalitolerans


class: Kiritimatiellia

description: domain/bacteria

family: Pontiellaceae

full scientific name: Pontiella desulfatans van Vliet et al. 2020

genus: Pontiella

keyword: phylum/kiritimatiellota

order: Kiritimatiellales

phylum: Kiritimatiellota

species: Pontiella desulfatans

class: Kiritimatiellae

phylum: Kiritimatiellaeota


description: domain/bacteria

full scientific name: Pontiella sulfatireligans van Vliet et al. 2020

species: Pontiella sulfatireligans


class: Planctomycetia

description: domain/bacteria

family: Lacipirellulaceae

full scientific name: Aeoliella mucimassa Wiegand et al. 2021

genus: Aeoliella

keyword: phylum/planctomycetota

order: Pirellulales

phylum: Planctomycetota

species: Aeoliella mucimassa

full scientific name: Aeoliella mucimassa Wiegand et al. 2020

phylum: Planctomycetes

description: Aeoliella mucimassa strain Pan181 16S ribosomal RNA gene, partial sequence

description: ASM774803v1 assembly for Aeoliella mucimassa Pan181


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium helveticum Ghielmetti et al. 2021

genus: Mycobacterium

species: Mycobacterium helveticum

description: Mycobacterium helveticum strain 16-83 16S ribosomal RNA gene, partial sequence

description: ASM771420v1 assembly for Mycobacterium helveticum 16-83


description: domain/bacteria

full scientific name: <I>Nocardia</I> Trevisan 1889 (Approved Lists 1980)

species: Nocardia sp.

synonym: Micropolyspora

full scientific name: Nocardia sp.


description: domain/bacteria

family: Kineosporiaceae

full scientific name: Kineococcus indalonis Molina-Menor et al. 2021

genus: Kineococcus

order: Kineosporiales

species: Kineococcus indalonis

full scientific name: Kineococcus indalonis Molina-Menor et al. 2020

description: Kineococcus indalonis strain T90 16S ribosomal RNA gene, partial sequence

description: ASM990639v1 assembly for Kineococcus indalonis T90


description: domain/bacteria

family: Ruaniaceae

full scientific name: Occultella aeris Schumann et al. 2021

genus: Occultella

species: Occultella aeris

full scientific name: Occultella aeris

description: Occultella aeris strain F300 16S ribosomal RNA gene, partial sequence

description: F300 assembly for Occultella aeris CIP 111667


description: domain/bacteria

family: Pirellulaceae

full scientific name: Stieleria varia Surup et al. 2021

genus: Stieleria

species: Stieleria varia

full scientific name: Stieleria varia Surup et al. 2020

strain designation: Pla52n, Pla52neu

description: ASM786004v1 assembly for Stieleria varia Pla52n


description: domain/bacteria

full scientific name: Pseudobythopirellula maris Wiegand et al. 2021

genus: Pseudobythopirellula

species: Pseudobythopirellula maris

full scientific name: Pseudobythopirellula maris Wiegand et al. 2020

strain designation: Malle 64, Mal64

description: Pseudobythopirellula maris strain Mal64 16S ribosomal RNA gene, partial sequence

description: ASM785994v1 assembly for Pseudobythopirellula maris Mal64


description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: Bifidobacterium olomucense Neuzil-Bunesova et al. 2021

genus: Bifidobacterium

order: Bifidobacteriales

species: Bifidobacterium olomucense

description: Bifidobacterium sp. VB26 strain VB26 = DSM 109959 16S ribosomal RNA gene, partial sequence.

description: ASM1293237v1 assembly for Bifidobacterium olomucense DSM 109959


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)

genus: Pseudomonas

order: Pseudomonadales

species: Pseudomonas aeruginosa

synonym: Pseudomonas paraeruginosa

synonym: Bacterium aeruginosum


description: domain/bacteria

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900


description: domain/bacteria

description: 239_10Pc_1_contigs_500 assembly for Pseudomonas aeruginosa


description: domain/bacteria

description: 275_10Pc_4_contigs_500 assembly for Pseudomonas aeruginosa


description: domain/bacteria

strain designation: Q1278 BWKH 7


description: domain/bacteria

full scientific name: Pseudolactococcus paracarnosus (Hilgarth et al. 2020) Abe et al. 2025

genus: Pseudolactococcus

species: Pseudolactococcus paracarnosus

synonym: Lactococcus paracarnosus

full scientific name: Lactococcus paracarnosus Hilgarth et al. 2020

genus: Lactococcus

species: Lactococcus paracarnosus

description: ASM4671887v1 assembly for Pseudolactococcus paracarnosus DSM 111017


description: domain/bacteria

family: Oscillospiraceae

full scientific name: Pseudoflavonifractor gallinarum Zenner et al. 2021

genus: Pseudoflavonifractor

order: Eubacteriales

species: Pseudoflavonifractor gallinarum

full scientific name: Pseudoflavonifractor sp.

species: Pseudoflavonifractor sp.

description: Pseudoflavonifractor gallinarum strain Cla-CZ-98 16S ribosomal RNA gene, partial sequence

description: ASM1498285v1 assembly for Pseudoflavonifractor gallinarum DSM 107456


description: domain/bacteria

full scientific name: Mycobacterium numidiamassiliense Bouam et al. 2018

order: Mycobacteriales

species: Mycobacterium numidiamassiliense

description: PRJEB19151 assembly for Mycobacterium numidiamassiliense AB215


culture collection no.: DSM 103407, Marseille-P2849

class: Coriobacteriia

description: domain/bacteria

family: Eggerthellaceae

full scientific name: Raoultibacter massiliensis Traore et al. 2022

genus: Raoultibacter

order: Eggerthellales

species: Raoultibacter massiliensis

full scientific name: Raoultibacter massiliensis Traore et al. 2016

description: Eggerthellaceae bacterium Marseille-P2849 partial 16S rRNA gene, strain Marseille-P2849

description: PRJEB21863 assembly for Raoultibacter massiliensis Marseille-P2849


description: domain/bacteria

family: Atopobiaceae

full scientific name: <I>Olsenella</I> Dewhirst et al. 2001

genus: Olsenella

order: Coriobacteriales

species: Olsenella sp.

synonym: Parafannyhessea

full scientific name: Olsenella sp.


culture collection no.: DSM 102072, Marseille-P2300

description: domain/bacteria

full scientific name: Olsenella timonensis Ndongo et al. 2019

species: Olsenella timonensis

description: Olsenella sp. Marseille-P2300 partial 16S rRNA gene, strain Marseille-P2300

description: PRJEB16351 assembly for Olsenella timonensis Marseille-P2300


description: domain/bacteria

full scientific name: Thermophilibacter gallinarum (Zenner et al. 2021) Lu et al. 2021

genus: Thermophilibacter

species: Thermophilibacter gallinarum

synonym: Olsenella gallinarum

full scientific name: Thermophilibacter gallinarum

description: Thermophilibacter gallinarum strain Cla-CZ-62 16S ribosomal RNA gene, partial sequence

description: ASM1498272v1 assembly for Thermophilibacter gallinarum DSM 107455


description: domain/bacteria

family: Alicyclobacillaceae

full scientific name: Alicyclobacillus fructus Roth et al. 2021

genus: Alicyclobacillus

order: Caryophanales

species: Alicyclobacillus fructus

description: ASM1732960v1 assembly for Alicyclobacillus fructus FSL-W10-0059


description: domain/bacteria

full scientific name: Pirellulimonas nuda Wiegand et al. 2021

genus: Pirellulimonas

species: Pirellulimonas nuda

full scientific name: Pirellulimonas nuda Wiegand et al. 2020

description: Pirellulimonas nuda strain Pla175 16S ribosomal RNA gene, partial sequence

description: ASM775085v1 assembly for Pirellulimonas nuda Pla175


description: domain/bacteria

family: Rhizobiaceae

full scientific name: <I>Rhizobium</I> Frank 1889 (Approved Lists 1980)

genus: Rhizobium

order: Hyphomicrobiales

species: Rhizobium sp.

synonym: Velazquezella

synonym: Arminella

synonym: Martinezella

synonym: Limnomicrobium

synonym: Phytoamicus

synonym: Metarhizobium

synonym: Paenirhizobium

synonym: Peteryoungia

full scientific name: Rhizobium sp.


description: domain/bacteria

description: ASM434233v1 assembly for Rhizobium sp. PP-F2F-G48


description: domain/bacteria

description: F03_1.2 assembly for Rhizobium sp. Khangiran2


description: domain/bacteria

full scientific name: Pseudorhizobium banfieldiae Lassalle et al. 2021

genus: Pseudorhizobium

species: Pseudorhizobium banfieldiae

description: Pseudorhizobium banfieldiae strain NT-26 16S ribosomal RNA gene, partial sequence

description: ASM96742v1 assembly for Pseudorhizobium banfieldiae NT-26


description: domain/bacteria

full scientific name: Galactobacter caseinivorans Hahne et al. 2019

genus: Galactobacter

order: Micrococcales

species: Galactobacter caseinivorans

description: Galactobacter caseinivorans strain JZ R-183 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Nocardiaceae

full scientific name: Rhodococcus erythropolis (Gray and Thornton 1928) Goodfellow and Alderson 1979 (Approved Lists 1980)

genus: Rhodococcus

species: Rhodococcus erythropolis

synonym: Rhodococcus jialingiae

synonym: Rhodococcus degradans

synonym: Rhodococcus qingshengii

synonym: Nocardia erythropolis

synonym: Rhodococcus enclensis

synonym: Mycobacterium erythropolis

synonym: Rhodococcus baikonurensis

synonym: Nocardia calcarea

synonym: Arthrobacter picolinophilus

full scientific name: Rhodococcus erythropolis (Gray and Thornton 1928) Goodfellow and Alderson 1979 emend. Nouioui et al. 2018

strain designation: CCMMB1294, GK12

description: Rhodococcus erythropolis strain GK12 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Gordoniaceae

full scientific name: Gordonia rubripertincta corrig. (Hefferan 1904) Stackebrandt et al. 1989

genus: Gordonia

species: Gordonia rubripertincta

synonym: Gordonia rubropertinctus

synonym: Bacillus rubropertinctus

synonym: Gordona rubra

synonym: Rhodococcus rubropertinctus

synonym: Gordona rubropertinctus

synonym: Serratia corallina

synonym: Rhodococcus corallinus

synonym: Gordona rubripertincta

full scientific name: Gordonia rubripertincta (Hefferan 1904) Stackebrandt et al. 1989 emend. Nouioui et al. 2018

description: ASM356862v1 assembly for Gordonia rubripertincta CWB2


description: domain/bacteria

full scientific name: Agrobacterium bohemicum Zahradnik et al. 2018

genus: Agrobacterium

species: Agrobacterium bohemicum

description: ASM289671v1 assembly for Agrobacterium bohemicum R90


description: domain/bacteria

full scientific name: Rhizobium rhizophilum Gao et al. 2020

species: Rhizobium rhizophilum

synonym: Peteryoungia rhizophila

description: Rhizobium rhizophilum strain 7209-2 16S ribosomal RNA gene, partial sequence

description: ASM491214v1 assembly for Rhizobium rhizophilum 7209-2


description: domain/bacteria

full scientific name: <I>Rhodococcus</I> Zopf 1891 (Approved Lists 1980)

species: Rhodococcus sp.

synonym: Prescottella

synonym: Rhodococcoides

synonym: Prescottia

full scientific name: Rhodococcus sp.


class: Negativicutes

description: domain/bacteria

family: Selenomonadaceae

full scientific name: <I>Selenomonas</I> von Prowazek 1913 (Approved Lists 1980)

genus: Selenomonas

order: Selenomonadales

species: Selenomonas sp.

synonym: Ancyromonas

full scientific name: Selenomonas sp.

description: Selenomonas sp. FOBRC6 16S ribosomal RNA gene, partial sequence

description: SspFOBRC6v1.0 assembly for Selenomonas sp. FOBRC6


description: domain/bacteria

description: Selenomonas sp. FOBRC9 16S ribosomal RNA gene, partial sequence

description: SspFOBRC9v1.0 assembly for Selenomonas sp. FOBRC9


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Paenibacillus apii Tong et al. 2020

genus: Paenibacillus

species: Paenibacillus apii

description: Paenibacillus apii strain 7124 16S ribosomal RNA gene, partial sequence

description: ASM1104368v1 assembly for Paenibacillus apii 7124


class: Clostridia

description: domain/bacteria

family: Natronincolaceae

full scientific name: Alkaliphilus serpentinus Postec et al. 2022

genus: Alkaliphilus

order: Peptostreptococcales

species: Alkaliphilus serpentinus

family: Clostridiaceae

full scientific name: Alkaliphilus serpentinus Postec et al. 2020

strain designation: LacT

description: Alkaliphilus serpentinus strain LacT 16S ribosomal RNA gene, partial sequence

description: ASM901725v1 assembly for Alkaliphilus serpentinus LacT


class: Bacilli

description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus capitis Kloos and Schleifer 1975 (Approved Lists 1980)

genus: Staphylococcus

species: Staphylococcus capitis


description: domain/bacteria

full scientific name: Staphylococcus epidermidis (Winslow and Winslow 1908) Evans 1916 (Approved Lists 1980)

species: Staphylococcus epidermidis

synonym: Albococcus epidermidis


description: domain/bacteria

full scientific name: Ructibacterium gallinarum Zenner et al. 2021

genus: Ructibacterium

species: Ructibacterium gallinarum

full scientific name: Ructibacterium gallinarum

description: Ructibacterium gallinarum strain Cla-CZ-49 16S ribosomal RNA gene, partial sequence

description: ASM1498278v1 assembly for Ructibacterium gallinarum DSM 107454


description: domain/bacteria

full scientific name: Staphylococcus simulans Kloos and Schleifer 1975 (Approved Lists 1980)

species: Staphylococcus simulans


description: domain/bacteria

full scientific name: Staphylococcus warneri Kloos and Schleifer 1975 (Approved Lists 1980)

species: Staphylococcus warneri


description: domain/bacteria

full scientific name: Staphylococcus warneri Kloos and Schleifer 1975


description: domain/bacteria

family: Bacillaceae

full scientific name: <I>Peribacillus</I> Patel and Gupta 2020

genus: Peribacillus

species: Peribacillus sp.

synonym: Paraperibacillus

full scientific name: Peribacillus sp.


description: domain/bacteria

full scientific name: Gemmiger gallinarum Zenner et al. 2021

genus: Gemmiger

species: Gemmiger gallinarum

family: Hyphomicrobiaceae

full scientific name: Gemmiger sp.

species: Gemmiger sp.

description: Gemmiger gallinarum strain Cla-CZ-245 16S ribosomal RNA gene, partial sequence

description: ASM1498280v1 assembly for Gemmiger gallinarum DSM 109015


description: domain/bacteria

family: Peptoniphilaceae

full scientific name: Urinicoccus massiliensis Yimagou et al. 2019

genus: Urinicoccus

order: Tissierellales

species: Urinicoccus massiliensis

synonym: Urinacoccus massiliensis

description: Peptoniphilaceae bacterium FC2 partial 16S rRNA gene, strain FC2

description: PRJEB18034 assembly for Urinicoccus massiliensis FC2


description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus cecorum (Devriese et al. 1983) Williams et al. 1989

genus: Enterococcus

order: Lactobacillales

species: Enterococcus cecorum

synonym: Streptococcus cecorum

description: Enterococcus cecorum strain ClaCZ2 16S ribosomal RNA gene, partial sequence


culture collection no.: DSM 103272, CSUR P2799, Marseille-P2799

description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium urinipleomorphum corrig. Niang et al. 2021

genus: Corynebacterium

species: Corynebacterium urinipleomorphum

synonym: Corynebacterium urinapleomorphum

full scientific name: Corynebacterium urinapleomorphum Niang et al. 2019

species: Corynebacterium urinapleomorphum

description: Corynebacterium sp. Marseille-P2799 partial 16S rRNA gene, strain Marseille-P2799

description: ASM90015553v1 assembly for Corynebacterium urinipleomorphum Marseille-P2799


description: domain/bacteria

family: Lachnospiraceae

full scientific name: <I>Extibacter</I> Lagkouvardos et al. 2017

genus: Extibacter

species: Extibacter sp.

full scientific name: Extibacter sp.

order: Not assigned to order


class: Desulfobacteria

description: domain/bacteria

family: Desulfobacteraceae

full scientific name: <I>Desulforegula</I> Rees and Patel 2001

genus: Desulforegula

order: Desulfobacterales

species: Desulforegula sp.

full scientific name: Desulforegula sp.


class: Not assigned to order

family: Not assigned to family

full scientific name: unclassified bacterium

genus: unclassified

phylum: Not assigned to order

species: unclassified bacterium

strain designation: KNH

description: Sulfate-reducing bacterium KNH gene for 16S rRNA, partial sequence


description: domain/bacteria

full scientific name: <I>Lacrimispora</I> Haas and Blanchard 2020

genus: Lacrimispora

phylum: Bacillota

species: Lacrimispora sp.

full scientific name: Lacrimispora sp.

strain designation: CP 19

description: Clostridiaceae bacterium CP19 16S ribosomal RNA gene, partial sequence


class: Chitinophagia

description: domain/bacteria

family: Chitinophagaceae

full scientific name: <I>Thermoflavifilum</I> Anders et al. 2014

genus: Thermoflavifilum

order: Chitinophagales

species: Thermoflavifilum sp.

synonym: Crenotalea

full scientific name: Thermoflavifilum sp.

strain designation: NYFB

description: Chitinophagaceae bacterium NYFB 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Anaeropeptidivorans aminofermentans Köller et al. 2022

genus: Anaeropeptidivorans

species: Anaeropeptidivorans aminofermentans

full scientific name: Anaeropeptidivorans aminofermentans

description: Anaeropeptidivorans aminofermentans strain M3/9 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Streptococcaceae

full scientific name: <I>Streptococcus</I> Rosenbach 1884 (Approved Lists 1980)

genus: Streptococcus

species: Streptococcus sp.

synonym: Okadaella

full scientific name: Streptococcus sp.

phylum: Firmicutes

description: Streptococcus sp. NK-2013-c gene for 16S ribosomal RNA, partial sequence.


description: domain/bacteria

full scientific name: Streptococcus hillyeri MacFadyen et al. 2019

species: Streptococcus hillyeri

description: Streptococcus hillyeri 16S ribosomal RNA gene, partial sequence

description: ASM368695v1 assembly for Streptococcus hillyeri 28462


class: Actinomycetes

description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces albidoflavus (Rossi Doria 1891) Waksman and Henrici 1948 (Approved Lists 1980)

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces albidoflavus

synonym: Streptomyces felleus

synonym: Actinomyces sampsonii

synonym: Streptomyces sampsonii

synonym: Streptotrix albidoflava

synonym: Streptomyces globisporus subsp. caucasicus

synonym: Actinomyces globisporus subsp. caucasicus

synonym: Streptomyces odorifer

synonym: Streptothrix coelicolor

synonym: Streptomyces limosus

synonym: Streptomyces champavatii

synonym: Streptomyces coelicolor

synonym: Streptomyces griseus subsp. solvifaciens

synonym: Cladothrix odorifera

synonym: Streptomyces canescens

class: Actinobacteria

full scientific name: Streptomyces albidoflavus (Rossi Doria 1891) Waksman and Henrici 1948 emend. Nouioui et al. 2018

order: Streptomycetales

strain designation: M145, Streptomyces coelicolor M145 - derivative of A3(2)


description: domain/bacteria

full scientific name: Salicibibacter cibarius Oh et al. 2021

genus: Salicibibacter

species: Salicibibacter cibarius

description: ASM1649572v1 assembly for Salicibibacter cibarius NKC5-3


class: Bacteroidia

description: domain/bacteria

family: Barnesiellaceae

full scientific name: Coprobacter secundus subsp. similis Sakamoto et al. 2021

genus: Coprobacter

order: Bacteroidales

species: Coprobacter secundus subsp. similis

description: Coprobacter secundus subsp. similis 2CBH44 gene for 16S rRNA, partial sequence

description: ASM1509727v1 assembly for Coprobacter secundus subsp. similis 2CBH44


description: domain/bacteria

family: Oscillospiraceae

full scientific name: Solibaculum mannosilyticum Sakamoto et al. 2021

genus: Solibaculum

order: Eubacteriales

species: Solibaculum mannosilyticum

description: Solibaculum mannosilyticum 12CBH8 gene for 16S rRNA, partial sequence

description: ASM1514023v1 assembly for Solibaculum mannosilyticum 12CBH8


description: domain/bacteria

family: Microbacteriaceae

full scientific name: <I>Labedella</I> Lee 2007

genus: Labedella

species: Labedella sp.

full scientific name: Labedella sp.


description: domain/bacteria

full scientific name: Streptomyces atroolivaceus (Preobrazhenskaya et al. 1957) Pridham et al. 1958 (Approved Lists 1980)

species: Streptomyces atroolivaceus

synonym: Actinomyces atroolivaceus

synonym: Actinomyces olivoviridis

synonym: Streptomyces olivoviridis

full scientific name: Streptomyces atroolivaceus (Preobrazhenskaya et al. 1957) Pridham et al. 1958 emend. Nouioui et al. 2018

strain designation: BCRU MITI 12


description: domain/bacteria

full scientific name: Streptomyces cellulosae (Krainsky 1914) Waksman and Henrici 1948 (Approved Lists 1980)

species: Streptomyces cellulosae

synonym: Actinomyces cellulosae


description: domain/bacteria

full scientific name: Anaerocolumna sedimenticola Kim et al. 2022

genus: Anaerocolumna

species: Anaerocolumna sedimenticola

full scientific name: Anaerocolumna sedimenticola Kim et al. 2021

description: ASM993169v1 assembly for Anaerocolumna sedimenticola CBA3638


description: domain/bacteria

full scientific name: Streptomyces clavuligerus Higgens and Kastner 1971 (Approved Lists 1980)

species: Streptomyces clavuligerus

full scientific name: Streptomyces clavuligerus Higgens and Kastner 1971 emend. Nouioui et al. 2018


class: Alphaproteobacteria

description: domain/bacteria

family: Rhizobiaceae

full scientific name: <I>Neorhizobium</I> Mousavi et al. 2015

genus: Neorhizobium

species: Neorhizobium sp.

full scientific name: Neorhizobium sp.


description: domain/bacteria

family: Halomonadaceae

full scientific name: Halomonas maris Qiu et al. 2024

genus: Halomonas

order: Oceanospirillales

species: Halomonas maris

synonym: Vreelandella maris

full scientific name: Halomonas maris

description: Halomonas maris strain QX-1 16S ribosomal RNA gene, partial sequence

description: ASM1337108v1 assembly for Vreelandella maris QX-1


description: domain/bacteria

full scientific name: Streptomyces finlayi (Szabó et al. 1963) Pridham 1970 (Approved Lists 1980)

species: Streptomyces finlayi

synonym: Actinomyces finlayi

strain designation: BCRU MITI 15


description: domain/bacteria

full scientific name: Streptomyces flavovirens (Waksman 1923) Waksman and Henrici 1948 (Approved Lists 1980)

species: Streptomyces flavovirens

synonym: Actinomyces flavogriseus

synonym: Streptomyces flavogriseus

synonym: Actinomyces flavovirens

synonym: Streptomyces nigrifaciens

full scientific name: Streptomyces flavovirens (Waksman 1923) Waksman and Henrici 1948 emend. Lanoot et al. 2005


description: domain/bacteria

full scientific name: Pseudolactococcus carnosus (Hilgarth et al. 2020) Abe et al. 2025

genus: Pseudolactococcus

species: Pseudolactococcus carnosus

synonym: Lactococcus carnosus

full scientific name: Lactococcus carnosus Hilgarth et al. 2020

genus: Lactococcus

species: Lactococcus carnosus


description: domain/bacteria

family: Micrococcaceae

full scientific name: Galactobacter valiniphilus Hahne et al. 2019

genus: Galactobacter

species: Galactobacter valiniphilus

description: Galactobacter valiniphilus strain JZ R-35 16S ribosomal RNA gene, partial sequence

description: ASM357597v1 assembly for Galactobacter valiniphilus JZ R-35


description: domain/bacteria

family: Roseobacteraceae

full scientific name: Marimonas lutisalis Lee et al. 2020

genus: Marimonas

order: Rhodobacterales

species: Marimonas lutisalis

family: Rhodobacteraceae

description: ASM543496v1 assembly for Marimonas lutisalis GH1-19


description: domain/bacteria

family: Caulobacteraceae

full scientific name: Brevundimonas pondensis Friedrich et al. 2021

genus: Brevundimonas

order: Caulobacterales

species: Brevundimonas pondensis

full scientific name: Brevundimonas pondensis

description: ASM1748734v1 assembly for Brevundimonas pondensis LVF1


description: domain/bacteria

full scientific name: <I>Cryobacterium</I> Suzuki et al. 1997

genus: Cryobacterium

species: Cryobacterium sp.

full scientific name: Cryobacterium sp.

strain designation: FB 3


description: domain/bacteria


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lactobacillus nasalidis Suzuki-Hashido et al. 2021

genus: Lactobacillus

species: Lactobacillus nasalidis

description: Lactobacillus nasalidis YZ01 gene for 16S ribosomal RNA, partial sequence

description: ASM1658777v1 assembly for Lactobacillus nasalidis YZ01


description: domain/bacteria

full scientific name: Limosilactobacillus rudii Li et al. 2021

genus: Limosilactobacillus

species: Limosilactobacillus rudii

description: ASM1414545v1 assembly for Limosilactobacillus rudii STM3_1


description: domain/bacteria

full scientific name: Limosilactobacillus agrestis Li et al. 2021

species: Limosilactobacillus agrestis

description: ASM1414558v1 assembly for Limosilactobacillus agrestis WF-MT5-A


description: domain/bacteria

full scientific name: Limosilactobacillus albertensis Li et al. 2021

species: Limosilactobacillus albertensis

description: ASM1414555v1 assembly for Limosilactobacillus albertensis Lr3000


description: domain/bacteria

full scientific name: Limosilactobacillus balticus Li et al. 2021

species: Limosilactobacillus balticus

description: ASM1414561v1 assembly for Limosilactobacillus balticus BG-AF3-A


description: domain/bacteria

full scientific name: Limosilactobacillus fastidiosus Li et al. 2021

species: Limosilactobacillus fastidiosus

description: ASM1414550v1 assembly for Limosilactobacillus fastidiosus WF-MO7-1


class: Desulfovibrionia

description: domain/bacteria

family: Desulfovibrionaceae

full scientific name: Desulfovibrio subterraneus Ueno et al. 2021

genus: Desulfovibrio

order: Desulfovibrionales

species: Desulfovibrio subterraneus

synonym: Psychrodesulfovibrio subterraneus

class: Deltaproteobacteria

description: Desulfovibrio subterraneus HN2 gene for 16S rRNA, partial sequence

description: ASM1334028v1 assembly for Desulfovibrio subterraneus HN2


description: domain/bacteria

full scientific name: Desulfovibrio diazotrophicus corrig. Sayavedra et al. 2021

species: Desulfovibrio diazotrophicus

synonym: Desulfovibrio diazotrophica

full scientific name: Desulfovibrio diazotrophicus Sayavedra et al. 2021


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Claveliimonas monacensis (Zenner et al. 2021) Hisatomi et al. 2023

genus: Claveliimonas

species: Claveliimonas monacensis

synonym: Sellimonas monacensis

full scientific name: Sellimonas monacensis

genus: Sellimonas

species: Sellimonas monacensis

description: Claveliimonas monacensis strain Cla-CZ-80 16S ribosomal RNA gene, partial sequence

description: ASM1498297v1 assembly for Claveliimonas monacensis DSM 108991


description: domain/bacteria

family: Nocardioidaceae

full scientific name: Aeromicrobium chenweiae Li et al. 2020

genus: Aeromicrobium

order: Propionibacteriales

species: Aeromicrobium chenweiae

description: ASM306560v1 assembly for Aeromicrobium chenweiae 592


description: domain/bacteria

full scientific name: Streptomyces gibsoniae Nouioui et al. 2025

genus: Streptomyces

species: Streptomyces gibsoniae

full scientific name: Streptomyces gibsoniae  Nouioui et al. 2024


description: domain/bacteria

full scientific name: <I>Streptomyces</I> Waksman and Henrici 1943 (Approved Lists 1980)

species: Streptomyces sp.

synonym: Chainia

synonym: Actinacidiphila

synonym: Kitasatoa

synonym: Actinopycnidium

synonym: Elytrosporangium

synonym: Microellobosporia

synonym: Actinosporangium

synonym: Streptoverticillium

synonym: Microechinospora

synonym: Carbonactinospora

full scientific name: Streptomyces sp.


description: domain/bacteria

strain designation: ca 2/3 Streptos 0601-12.7, Strepto 1


description: domain/bacteria

strain designation: Agent 'Z'


description: domain/bacteria

full scientific name: Streptomyces johnsoniae Nouioui et al. 2025

species: Streptomyces johnsoniae

full scientific name: Streptomyces johnsoniae  Nouioui et al. 2024


description: domain/bacteria

full scientific name: Streptomyces dubilierae Nouioui et al. 2025

species: Streptomyces dubilierae

full scientific name: Streptomyces dubilierae  Nouioui et al. 2024


description: domain/bacteria

strain designation: Igact1, Igact1-B5


description: domain/bacteria

strain designation: Md6w, Md6w(G2)


description: domain/bacteria

description: ASM129359v1 assembly for Streptomyces sp. TP-A0875


description: domain/bacteria

full scientific name: Streptomyces doudnae Nouioui et al. 2025

species: Streptomyces doudnae

full scientific name: Streptomyces doudnae  Nouioui et al. 2024


description: domain/bacteria

description: Streptomyces sp. CM-23 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Streptomyces sp. 061337 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Streptomyces sp. PP14 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Streptomyces albidus Kaewkla and Franco 2022

species: Streptomyces albidus

full scientific name: Streptomyces albidus

description: Streptomyces sp. CAP 215 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Streptomyces coryli Saygin et al. 2020

species: Streptomyces coryli

description: Streptomyces coryli strain A7024 16S ribosomal RNA gene, partial sequence

description: ASM1104497v1 assembly for Streptomyces coryli A7024


description: domain/bacteria

description: Streptomyces sp. MS-1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Streptomyces sp. MW-2 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Streptomyces sp. MW-8 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Streptomyces sp. MS-9 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Streptomyces sp. M77 16S ribosomal RNA gene, partial sequence


description: domain/bacteria


description: domain/bacteria

strain designation: ERV 7, Ethiopian Rift Valley 7

description: Streptomyces sp. ERV7 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Streptomyces sp. DSM 42119 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Streptomyces sp. S601 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Streptomyces sp. UTMC 2189 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

strain designation: UofK 6


description: domain/bacteria

strain designation: UofK 7


description: domain/bacteria

strain designation: BCRU MITI 11


description: domain/bacteria

full scientific name: Streptomyces solincola Lee et al. 2022

species: Streptomyces solincola

description: Streptomyces solincola 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Streptomyces sp. TPS3 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: ASM331164v1 assembly for Streptomyces sp. PT12


description: domain/bacteria

description: Streptomyces sp. SBT349 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

strain designation: NTD 23


description: domain/bacteria

full scientific name: Streptomyces bathyalis Risdian et al. 2021

species: Streptomyces bathyalis

description: ASM1591044v1 assembly for Streptomyces bathyalis ASO4wet


description: domain/bacteria

full scientific name: Streptomyces griseiscabiei Nguyen et al. 2022

species: Streptomyces griseiscabiei

description: ASM2001092v1 assembly for Streptomyces griseiscabiei NRRL B-2795

description: ASM215607v1 assembly for Streptomyces griseiscabiei NRRL B-2795


description: domain/bacteria

full scientific name: Streptomyces venezuelae Ehrlich et al. 1948 (Approved Lists 1980)

species: Streptomyces venezuelae

full scientific name: Streptomyces venezuelae Ehrlich et al. 1948 emend. Nouioui et al. 2018

description: ASM188659v1 assembly for Streptomyces venezuelae NRRL B-65442

description: ASM2143222v1 assembly for Streptomyces venezuelae NRRL B-65442


description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: Bifidobacterium canis Neuzil-Bunesova et al. 2020

genus: Bifidobacterium

order: Bifidobacteriales

species: Bifidobacterium canis

description: Bifidobacterium canis strain GSD1FS 16S ribosomal RNA gene, partial sequence

description: ASM972706v1 assembly for Bifidobacterium canis GSD1FS


class: Betaproteobacteria

description: domain/bacteria

family: Burkholderiaceae

full scientific name: Chitinasiproducens palmae Madhaiyan et al. 2020

genus: Chitinasiproducens

order: Burkholderiales

species: Chitinasiproducens palmae

description: Chitinasiproducens palmae strain JS23 16S ribosomal RNA gene, partial sequence

description: IMG-taxon 2651870115 annotated assembly for Chitinasiproducens palmae JS23


class: Gammaproteobacteria

description: domain/bacteria

family: Lysobacteraceae

full scientific name: Luteimonas chenhongjianii Zhang et al. 2020

genus: Luteimonas

order: Lysobacterales

species: Luteimonas chenhongjianii

description: Luteimonas chenhongjianii 16S ribosomal RNA gene, partial sequence

description: ASM232710v1 assembly for Luteimonas chenhongjianii 100111


class: Desulfuromonadia

description: domain/bacteria

family: Syntrophotaleaceae

full scientific name: Syntrophotalea acetylenivorans Baesman et al. 2021

genus: Syntrophotalea

order: Desulfuromonadales

species: Syntrophotalea acetylenivorans

description: Syntrophotalea acetylenivorans 16S ribosomal RNA gene, partial sequence

description: ASM188777v1 assembly for Syntrophotalea acetylenivorans SFB93


description: domain/bacteria

family: Sphaerotilaceae

full scientific name: <I>Roseateles</I> Suyama et al. 1999

genus: Roseateles

species: Roseateles sp.

synonym: Pelomonas

synonym: Paucibacter

synonym: Kinneretia

synonym: Mitsuaria

family: Comamonadaceae

full scientific name: Kinneretia sp.

genus: Kinneretia

species: Kinneretia sp.

description: ASM1562442v1 assembly for Roseateles sp. DAIF2


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces lavenduligriseus (Locci et al. 1969) Witt and Stackebrandt 1991

species: Streptomyces lavenduligriseus

synonym: Streptoverticillium lavenduligriseum

description: Streptomyces lavendulae lavendulae ATCC 11924


description: domain/bacteria

full scientific name: Bifidobacterium erythrocebi Neuzil-Bunesova et al. 2021

species: Bifidobacterium erythrocebi

description: Bifidobacterium sp. VB31 strain VB31 = DSM 109960 16S ribosomal RNA gene, partial sequence.

description: ASM1293267v1 assembly for Bifidobacterium erythrocebi DSM 109960


description: domain/bacteria

full scientific name: Bifidobacterium platyrrhinorum Modesto et al. 2025

species: Bifidobacterium platyrrhinorum

synonym: Bifidobacterium platyrrhinorum

full scientific name: Bifidobacterium platyrrhinorum Modesto et al. 2020

description: Bifidobacterium platyrrhinorum strain SMA15 16S ribosomal RNA gene, partial sequence

description: ASM1066764v1 assembly for Bifidobacterium platyrrhinorum SMA15


description: domain/bacteria

family: Thermoactinomycetaceae

full scientific name: Thermoactinomyces vulgaris Tsiklinsky 1899 (Approved Lists 1980)

genus: Thermoactinomyces

order: Caryophanales

species: Thermoactinomyces vulgaris

synonym: Thermoactinomyces candidus

full scientific name: Thermoactinomyces vulgaris Tsilinsky 1899

strain designation: TK 10


description: domain/bacteria

family: Azospirillaceae

full scientific name: Skermanella rubra Zhang et al. 2015

genus: Skermanella

order: Rhodospirillales

species: Skermanella rubra

description: Actinoalloteichus cyanogriseus strain K111 16S ribosomal RNA gene, partial sequence.


class: Planctomycetia

description: domain/bacteria

family: Planctomycetaceae

full scientific name: Gimesia aquarii Wiegand et al. 2021

genus: Gimesia

order: Planctomycetales

species: Gimesia aquarii

full scientific name: Gimesia aquarii

description: Gimesia aquarii strain V144 16S ribosomal RNA gene, partial sequence

assembly level: chromosome

description: ASM774819v1 assembly for Gimesia aquarii V144


description: domain/bacteria

description: ASM774817v1 assembly for Gimesia aquarii V202


class: Bacillota, not assigned to class

description: domain/bacteria

family: Bacillota, not assigned to family

full scientific name: Capillibacterium thermochitinicola Ungkulpasvich et al. 2021

genus: Capillibacterium

order: Bacillota, not assigned to order

species: Capillibacterium thermochitinicola

class: Firmicutes, not assigned to class

family: Firmicutes, not assigned to family

order: Firmicutes, not assigned to order

description: Capillibacterium thermochitinicola strain UUS1-1 16S ribosomal RNA gene, partial sequence

description: ASM1366468v1 assembly for Capillibacterium thermochitinicola UUS1-1


description: domain/bacteria

family: Microbacteriaceae

full scientific name: <I>Salinibacterium</I> Han et al. 2003

genus: Salinibacterium

order: Micrococcales

species: Salinibacterium sp.

full scientific name: Salinibacterium sp.

description: Microbacteriaceae bacterium NMR2-II61 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus cohnii subsp. ureilyticus corrig. Kloos and Wolfshohl 1991

genus: Staphylococcus

synonym: Staphylococcus cohnii subsp. urealyticum

synonym: Staphylococcus ureilyticus

synonym: Staphylococcus urealyticus

full scientific name: Staphylococcus ureilyticus (Kloos and Wolfshohl 1991) Madhaiyan et al. 2020

species: Staphylococcus ureilyticus


description: domain/bacteria

species: Staphylococcus cohnii subsp. ureilyticus


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Limosilactobacillus vaginalis (Embley et al. 1989) Zheng et al. 2020

genus: Limosilactobacillus

order: Lactobacillales

species: Limosilactobacillus vaginalis

synonym: Lactobacillus vaginalis

description: Limosilactobacillus vaginalis strain ClaCZ13 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Moraxellaceae

full scientific name: <I>Acinetobacter</I> Brisou and Prévot 1954 (Approved Lists 1980)

genus: Acinetobacter

order: Pseudomonadales

species: Acinetobacter sp.

full scientific name: Acinetobacter sp.

strain designation: BWKH 175


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium rhizamassiliense Bouam et al. 2018

genus: Mycobacterium

order: Mycobacteriales

species: Mycobacterium rhizamassiliense

description: PRJEB19165 assembly for Mycobacterium rhizamassiliense AB57


description: domain/bacteria

family: Micrococcaceae

full scientific name: Citricoccus lacusdiani Zhang et al. 2021

genus: Citricoccus

species: Citricoccus lacusdiani

full scientific name: Citricoccus lacusdiani Zhang et al. 2016

description: Citricoccus lacusdiani strain JXJ CY 21 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Streptomyces rubrogriseus (ex Krassilnikov 1970) Terekhova 1986

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces rubrogriseus

order: Streptomycetales

strain designation: CNQ 702


description: domain/bacteria

family: Bacillaceae

full scientific name: Rubeoparvulum massiliense Tidjani Alou et al. 2017

genus: Rubeoparvulum

species: Rubeoparvulum massiliense

description: Bacillaceae bacterium mt6 partial 16S rRNA gene, strain mt6

description: Rubeoparvulum massiliensis assembly for Rubeoparvulum massiliense mt6


description: domain/bacteria

full scientific name: Sediminibacillus terrae Wu et al. 2020

genus: Sediminibacillus

species: Sediminibacillus terrae

description: Sediminibacillus sp. JSM 102062 16S ribosomal RNA gene, partial sequence

description: ASM960243v1 assembly for Sediminibacillus terrae JSM 102062


description: domain/bacteria

full scientific name: Laceyella putida (Lacey and Cross 1989) Yoon et al. 2005

genus: Laceyella

species: Laceyella putida

synonym: Thermoactinomyces putidus


description: domain/bacteria

family: Gordoniaceae

full scientific name: Gordonia pseudamarae Riesco et al. 2022

genus: Gordonia

species: Gordonia pseudamarae

synonym: Gordonia pseudoamarae

description: ASM2527367v1 assembly for Gordonia pseudamarae CON9


culture collection no.: DSM 101074, Marseille-P2161, SN 15, CSUR P2161

description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium provencense Lo et al. 2019

genus: Corynebacterium

species: Corynebacterium provencense

synonym: Corynebacterium provencense


description: domain/bacteria

family: Nocardiaceae

full scientific name: Rhodococcus oryzae Li et al. 2020

genus: Rhodococcus

species: Rhodococcus oryzae

description: Rhodococcus oryzae 16S ribosomal RNA gene, partial sequence

description: ASM504923v1 assembly for Rhodococcus oryzae NEAU-CX67


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas hydrolytica Zhou et al. 2020

genus: Pseudomonas

species: Pseudomonas hydrolytica

synonym: Ectopseudomonas hydrolytica

description: ASM412373v1 assembly for Ectopseudomonas hydrolytica DSWY01

description: ASM2149534v2 assembly for Ectopseudomonas hydrolytica DSWY01


description: domain/bacteria

family: Dermabacteraceae

full scientific name: Dermabacter porcinasus Schlattmann et al. 2018

genus: Dermabacter

species: Dermabacter porcinasus

description: Dermabacter porcinasus strain 2a1I-BL09 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Rhodococcus spelaei Lee and Kim 2021

species: Rhodococcus spelaei

full scientific name: Rhodococcus spelaei Lee, S. D., Kim, I. S.

description: ASM670412v1 assembly for Rhodococcus spelaei C9-5


description: domain/bacteria

full scientific name: Mycobacterium vicinigordonae Liu et al. 2021

species: Mycobacterium vicinigordonae

full scientific name: Mycobacterium vicinigordonae Liu, G., Yu, X., Luo, J., Hu, Y., Dong, L., Jiang, G., Huo, F., Wang, F., Liang, Q., Huang, H.

description: Mycobacterium vicinigordonae 16S ribosomal RNA gene, partial sequence

description: ASM1346642v1 assembly for Mycobacterium vicinigordonae 24


description: domain/bacteria

family: Morganellaceae

full scientific name: <I>Proteus</I> Hauser 1885 (Approved Lists 1980)

genus: Proteus

order: Enterobacterales

species: Proteus sp.

synonym: Cosenzaea

full scientific name: Proteus sp.


class: Atribacteria

description: domain/bacteria

family: Atribacteraceae

full scientific name: Atribacter laminatus Katayama et al. 2021

genus: Atribacter

keyword: phylum/atribacterota

order: Atribacterales

phylum: Atribacterota

species: Atribacter laminatus

full scientific name: Atribacter laminatus Katayama et al. 2020

description: ASM1577551v1 assembly for Atribacter laminatus RT761


description: domain/bacteria

family: Kineosporiaceae

full scientific name: Kineococcus rubinsiae Mhatre et al. 2021

genus: Kineococcus

order: Kineosporiales

phylum: Actinomycetota

species: Kineococcus rubinsiae

full scientific name: Kineococcus rubinsiae Mhatre et al. 2020

description: Kineococcus rubinsiae strain B12 16S ribosomal RNA gene, partial sequence

description: ASM1183980v1 assembly for Kineococcus rubinsiae B12


description: domain/bacteria

full scientific name: Kineococcus siccus Molina-Menor et al. 2021

species: Kineococcus siccus

full scientific name: Kineococcus siccus Molina-Menor et al. 2020

phylum: Actinobacteria

description: Kineococcus siccus strain R8 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Kineococcus vitellinus Molina-Menor et al. 2021

species: Kineococcus vitellinus

full scientific name: Kineococcus vitellinus Molina-Menor et al. 2020

description: Kineococcus vitellinus strain T13 16S ribosomal RNA gene, partial sequence

description: Kineococcus sp. strain T13 16S ribosomal RNA gene, partial sequence

description: ASM990631v1 assembly for Kineococcus vitellinus T13


description: domain/bacteria

family: Pectobacteriaceae

full scientific name: Acerihabitans arboris Lee et al. 2021

genus: Acerihabitans

species: Acerihabitans arboris

description: Acerihabitans arboris strain SAP-6 16S ribosomal RNA gene, partial sequence

description: ASM1013153v1 assembly for Acerihabitans arboris SAP-6


description: domain/bacteria

family: Lacipirellulaceae

full scientific name: Botrimarina hoheduenensis Wiegand et al. 2022

genus: Botrimarina

order: Pirellulales

species: Botrimarina hoheduenensis

full scientific name: Botrimarina hoheduenensis Wiegand et al. 2020

description: Botrimarina hoheduenensis strain Pla111 16S ribosomal RNA gene, partial sequence

description: ASM785981v1 assembly for Botrimarina hoheduenensis Pla111


description: domain/bacteria

family: Ruaniaceae

full scientific name: Occultella glacieicola (Wang et al. 2019) Schumann et al. 2021

genus: Occultella

species: Occultella glacieicola

synonym: Haloactinobacterium glacieicola

description: Occultella glacieicola strain T3246-1 16S ribosomal RNA gene, partial sequence

description: ASM435382v1 assembly for Occultella glacieicola T3246-1


description: domain/bacteria

family: Mariprofundales, not assigned to family

full scientific name: Ghiorsea bivora Mori et al. 2017

genus: Ghiorsea

order: Mariprofundales

species: Ghiorsea bivora

class: Zetaproteobacteria

family: Zetaproteobacteria, not assigned to family

order: Zetaproteobacteria, not assigned to order

description: Ghiorsea bivora strain TAG-1 16S ribosomal RNA gene, partial sequence

description: ASM74441v1 assembly for Ghiorsea bivora TAG-1


description: domain/bacteria

family: Propionibacteriaceae

full scientific name: Tessaracoccus nasisuum Schlattmann et al. 2018

genus: Tessaracoccus

order: Propionibacteriales

species: Tessaracoccus nasisuum

description: Tessaracoccus nasisuum strain 1a6R-CH11an 16S ribosomal RNA gene, partial sequence


class: Ktedonobacteria

description: domain/bacteria

family: Ktedonobacteraceae

full scientific name: Ktedonobacter robiniae Yabe et al. 2021

genus: Ktedonobacter

keyword: phylum/chloroflexota

order: Ktedonobacterales

phylum: Chloroflexota

species: Ktedonobacter robiniae

full scientific name: Ktedonobacter robiniae Yabe et al.

phylum: Chloroflexi

description: Bacterium SOSP1-30 partial 16S rRNA gene

description: ASM1658737v1 assembly for Ktedonobacter robiniae SOSP1-30


description: domain/bacteria

family: Micromonosporaceae

full scientific name: <I>Actinoplanes</I> Couch 1950 (Approved Lists 1980)

genus: Actinoplanes

order: Micromonosporales

species: Actinoplanes sp.

synonym: Ampullaria

synonym: Symbioplanes

synonym: Winogradskya

synonym: Amorphosporangium

synonym: Amorphoplanes

synonym: Paractinoplanes

synonym: Ampullariella

full scientific name: Actinoplanes sp.

strain designation: RP-Ac 34


description: domain/bacteria

strain designation: RP-Ac 33


description: domain/bacteria

family: Moraxellaceae

full scientific name: Acinetobacter baumannii Bouvet and Grimont 1986

genus: Acinetobacter

phylum: Pseudomonadota

species: Acinetobacter baumannii


description: domain/bacteria

full scientific name: Corynebacterium yudongzhengii Zhu et al. 2020

species: Corynebacterium yudongzhengii

description: ASM306540v1 assembly for Corynebacterium yudongzhengii 2183


class: Bacilli

description: domain/bacteria

family: Paenibacillaceae

full scientific name: Brevibacillus thermoruber (Manachini et al. 1985 ex Guicciardi et al. 1968) Shida et al. 1996

genus: Brevibacillus

order: Caryophanales

species: Brevibacillus thermoruber

synonym: Bacillus thermoruber

full scientific name: Brevibacillus thermoruber (Manachini et al. 1985) Shida et al. 1996

description: ASM74463v1 assembly for Brevibacillus thermoruber PM1


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lactobacillus johnsonii Fujisawa et al. 1992

genus: Lactobacillus

species: Lactobacillus johnsonii

description: Lactobacillus johnsonii strain ClaCZ4 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Caulobacteraceae

full scientific name: Brevundimonas goettingensis Friedrich et al. 2021

genus: Brevundimonas

order: Caulobacterales

species: Brevundimonas goettingensis

full scientific name: Brevundimonas goettingensis

phylum: Proteobacteria

description: ASM1748740v1 assembly for Brevundimonas goettingensis LVF2


description: domain/bacteria

full scientific name: Limosilactobacillus reuteri subsp. kinnaridis Li et al. 2021

genus: Limosilactobacillus

description: ASM1414544v1 assembly for Limosilactobacillus reuteri AP3

description: ASM2078601v1 assembly for Limosilactobacillus reuteri AP3


description: domain/bacteria

full scientific name: Limosilactobacillus reuteri subsp. suis Li et al. 2021

species: Limosilactobacillus reuteri subsp. suis

description: Limosilactobacillus reuteri ATCC 53608 16S ribosomal RNA gene, partial sequence.

description: ASM23645v2 assembly for Limosilactobacillus reuteri subsp. suis ATCC 53608

description: ASM288865v1 assembly for Limosilactobacillus reuteri 20-2


description: domain/bacteria

family: Glycomycetaceae

full scientific name: Natronoglycomyces albus Sorokin et al. 2021

genus: Natronoglycomyces

order: Glycomycetales

species: Natronoglycomyces albus

full scientific name: Natronoglycomyces albus

description: Natronoglycomyces albus strain ACPA22 16S ribosomal RNA gene, partial sequence

description: ASM1692553v1 assembly for Natronoglycomyces albus DSM 106290


description: domain/bacteria

full scientific name: Companilactobacillus halodurans Zheng et al. 2020

genus: Companilactobacillus

order: Lactobacillales

species: Companilactobacillus halodurans

synonym: Lactobacillus halodurans

description: Lactobacillus sp. strain TMW 1.2172 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces ureilyticus Tokatli et al. 2021

genus: Streptomyces

species: Streptomyces ureilyticus

description: Streptomyces ureilyticus strain YC419 16S ribosomal RNA gene, partial sequence

description: ASM1104502v1 assembly for Streptomyces ureilyticus YC419


description: domain/bacteria

full scientific name: Companilactobacillus mishanensis (Wei and Gu 2019) Zheng et al. 2020

species: Companilactobacillus mishanensis

synonym: Companilactobacillus salsicarnum

synonym: Lactobacillus salsicarnum

synonym: Lactobacillus mishanensis

full scientific name: Companilactobacillus salsicarnum Zheng et al. 2020

species: Companilactobacillus salsicarnum

description: Lactobacillus sp. strain TMW 1.2098 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium terramassiliense Bouam et al. 2018

genus: Mycobacterium

species: Mycobacterium terramassiliense

description: PRJEB19184 assembly for Mycobacterium terramassiliense AB308


class: Flavobacteriia

description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Flagellimonas pacifica (Gao et al. 2015) Choi et al. 2018

genus: Flagellimonas

order: Flavobacteriales

phylum: Bacteroidota

species: Flagellimonas pacifica

synonym: Muricauda parva

synonym: Allomuricauda parva

synonym: Spongiibacterium pacificum

family: Staphylococcaceae

full scientific name: Staphylococcus piscifermentans Tanasupawat et al. 1992

genus: Staphylococcus

species: Staphylococcus piscifermentans


class: Actinomycetes

description: domain/bacteria

family: Microbacteriaceae

full scientific name: Microbacterium caowuchunii Tian et al. 2021

genus: Microbacterium

order: Micrococcales

species: Microbacterium caowuchunii

description: Microbacterium caowuchunii strain ST-M6 16S ribosomal RNA gene, partial sequence

description: ASM872775v1 assembly for Microbacterium caowuchunii ST-M6


description: domain/bacteria

family: Cellulomonadaceae

full scientific name: <I>Cellulomonas</I> Bergey et al. 1923 (Approved Lists 1980)

genus: Cellulomonas

species: Cellulomonas sp.

class: Actinobacteria

full scientific name: Cellulomonas sp.


description: domain/bacteria

description: Cellulomonas sp. ZY-1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Enterococcaceae

full scientific name: <I>Enterococcus</I> (ex Thiercelin and Jouhaud 1903) Schleifer and Kilpper-Bälz 1984

genus: Enterococcus

species: Enterococcus sp.

full scientific name: Enterococcus sp.

description: Enterococcus sp. CJ-1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: <I>Escherichia</I> Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

species: Escherichia sp.

synonym: Atlantibacter

full scientific name: Escherichia sp.

description: Escherichia sp. strain ClaCZ1 16S ribosomal RNA gene, partial sequence

description: ASM1498284v1 assembly for Escherichia sp. DSM 109009


description: domain/bacteria

full scientific name: Orlajensenia leifsoniae Gtari et al. 2025

genus: Orlajensenia

species: Orlajensenia leifsoniae

synonym: Leifsonia flava

description: Leifsonia flava strain SYP-B2174 16S ribosomal RNA gene, partial sequence

description: ASM457084v1 assembly for Orlajensenia leifsoniae SYP-B2174


description: domain/bacteria

family: Streptococcaceae

full scientific name: Pseudolactococcus insecticola (Noda et al. 2020) Abe et al. 2025

genus: Pseudolactococcus

species: Pseudolactococcus insecticola

synonym: Lactococcus insecticola

full scientific name: Lactococcus insecticola Noda et al. 2020

genus: Lactococcus

species: Lactococcus insecticola

description: Lactococcus insecticola Hs20B0_1 gene for 16S ribosomal RNA, partial sequence

description: ASM1117006v1 assembly for Pseudolactococcus insecticola Hs20B0-1


description: domain/bacteria

full scientific name: Streptomyces cyaneofuscatus (Kudrina 1957) Pridham et al. 1958 (Approved Lists 1980)

order: Kitasatosporales

species: Streptomyces cyaneofuscatus

synonym: Streptomyces cavourensis subsp. washingtonensis

synonym: Actinomyces cyaneofuscatus

full scientific name: Streptomyces cyaneofuscatus (Kudrina 1957) Pridham et al. 1958 emend. Nouioui et al. 2018

strain designation: Sg


description: domain/bacteria

family: Schleiferiaceae

full scientific name: Thermaurantimonas aggregans Iino et al. 2020

genus: Thermaurantimonas

species: Thermaurantimonas aggregans

phylum: Bacteroidetes

strain designation: LA

description: Thermaurantimonas aggregans LA gene for 16S ribosomal RNA, partial sequence

description: ASM385188v1 assembly for Thermaurantimonas aggregans LA


description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: <I>Bifidobacterium</I> Orla-Jensen 1924 (Approved Lists 1980)

genus: Bifidobacterium

order: Bifidobacteriales

species: Bifidobacterium sp.

full scientific name: Bifidobacterium sp.

description: Bifidobacterium sp. HM5-2 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria


culture collection no.: DSM 106015, TRE N

description: domain/bacteria


description: domain/bacteria

description: Bifidobacterium pullorum subsp. saeculare strain ClaCZ59 16S ribosomal RNA gene, partial sequence

description: ASM1498300v1 assembly for Bifidobacterium pullorum subsp. saeculare DSM 108971


class: Methanosarcinia

description: domain/archaea

family: Methanosarcinaceae

full scientific name: Methanolobus halotolerans Shen et al. 2020

genus: Methanolobus

order: Methanosarcinales

phylum: Methanobacteriota

species: Methanolobus halotolerans

class: Methanomicrobia

phylum: Euryarchaeota

description: Methanolobus halotolerans strain SY-01 16S ribosomal RNA gene, partial sequence

description: ASM474542v1 assembly for Methanolobus halotolerans SY-01


class: Spirochaetia

description: domain/bacteria

family: Spirochaetaceae

full scientific name: Oceanispirochaeta crateris Dubinina et al. 2020

genus: Oceanispirochaeta

keyword: phylum/spirochaetota

order: Spirochaetales

phylum: Spirochaetota

species: Oceanispirochaeta crateris

phylum: Spirochaetes

description: Spirochaeta sp. K2 16S ribosomal RNA gene, partial sequence

description: ASM832996v1 assembly for Oceanispirochaeta crateris K2


class: Clostridia

description: domain/bacteria

family: Natronincolaceae

full scientific name: Alkaliphilus pronyensis Postec et al. 2022

genus: Alkaliphilus

order: Peptostreptococcales

species: Alkaliphilus pronyensis

family: Clostridiaceae

full scientific name: Alkaliphilus pronyensis Postec et al. 2020

order: Eubacteriales

strain designation: LacV

description: Alkaliphilus pronyensis strain LacV 16S ribosomal RNA gene, partial sequence

description: ASM901727v1 assembly for Alkaliphilus pronyensis LacV


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Limosilactobacillus pontis (Vogel et al. 1994) Zheng et al. 2020

genus: Limosilactobacillus

species: Limosilactobacillus pontis

synonym: Lactobacillus pontis

description: Limosilactobacillus pontis strain ClaCZ76 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: <I>Microbacterium</I> Orla-Jensen 1919 (Approved Lists 1980)

species: Microbacterium sp.

synonym: Aureobacterium

synonym: Paramicrobacterium

full scientific name: Microbacterium sp.


description: domain/bacteria

description: Microbacterium sp. G5-77 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Microbacterium gubbeenense Brennan et al. 2001

species: Microbacterium gubbeenense


description: domain/bacteria

description: Microbacterium sp. DSM 27211 partial 16S rRNA gene, strain DSM 27211


description: domain/bacteria

family: Nocardiopsidaceae

full scientific name: <I>Nocardiopsis</I> (Brocq-Rousseau 1904) Meyer 1976 (Approved Lists 1980)

genus: Nocardiopsis

order: Streptosporangiales

species: Nocardiopsis sp.

synonym: Brachystreptospora

family: Nocardiopsaceae

full scientific name: Nocardiopsis sp.


description: domain/bacteria

strain designation: CNP 957


description: domain/bacteria

description: Nocardiopsis sp. CG3 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

full scientific name: Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980)

species: Staphylococcus aureus

synonym: Staphylococcus aureus subsp. anaerobius

synonym: Staphylococcus roterodami

full scientific name: Staphylococcus aureus Rosenbach 1884


description: domain/bacteria

description: SAWL001 assembly for Staphylococcus aureus SAWL001


description: domain/bacteria

strain designation: CC22-MRSA-IV, Barnim"(IsolateA257)


description: domain/bacteria

strain designation: CC22-MRSA-IV, Barnim" (Isolate B311)


description: domain/bacteria

strain designation: CC22-MSSA-IV (Isolate A161)


description: domain/bacteria

family: Thermoactinomycetaceae

full scientific name: <I>Thermoactinomyces</I> Tsiklinsky 1899 (Approved Lists 1980)

genus: Thermoactinomyces

species: Thermoactinomyces sp.

full scientific name: Thermoactinomyces sp.

strain designation: SCRIPP CNR 873


description: domain/bacteria


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: <I>Amycolatopsis</I> Lechevalier et al. 1986

genus: Amycolatopsis

order: Pseudonocardiales

species: Amycolatopsis sp.

synonym: Yuhushiella

full scientific name: Amycolatopsis sp.


description: domain/bacteria

family: Propionibacteriaceae

full scientific name: Propionibacterium westphaliense Schlattmann et al. 2018

genus: Propionibacterium

order: Propionibacteriales

species: Propionibacterium westphaliense

description: Propionibacterium westphaliense strain 1a7I-CH12an 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Oscillospiraceae

full scientific name: Faecalibacterium gallinarum Sakamoto et al. 2022

genus: Faecalibacterium

species: Faecalibacterium gallinarum

description: Bacterium ic1379 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: <I>Faecalibacterium</I> Duncan et al. 2002

species: Faecalibacterium sp.

full scientific name: Faecalibacterium sp.

description: Bacterium ic1340 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Faecalibacterium longum Zou et al. 2021

species: Faecalibacterium longum


description: domain/bacteria

full scientific name: Faecalibacterium butyricigenerans Zou et al. 2021

species: Faecalibacterium butyricigenerans


description: domain/bacteria

full scientific name: Clostridium fungisolvens Ueki et al. 2021

genus: Clostridium

species: Clostridium fungisolvens

description: Clostridium fungisolvens gene for 16S ribosomal RNA, partial sequence

description: ASM1419389v1 assembly for Clostridium fungisolvens TW1


description: domain/bacteria

full scientific name: Limosilactobacillus reuteri subsp. porcinus Li et al. 2021

description: Limosilactobacillus reuteri 3c6


description: domain/bacteria

family: Vibrionaceae

full scientific name: Listonella damselae corrig. (Love et al. 1982) MacDonell and Colwell 1986

genus: Listonella

order: Vibrionales

species: Listonella damselae

synonym: Listonella damsela

synonym: Photobacterium histaminum

synonym: Photobacterium damsela

synonym: Photobacterium damselae

synonym: Vibrio damselae

synonym: Vibrio damsela

full scientific name: Photobacterium damselae (Love et al. 1982) Smith et al. 1991

genus: Photobacterium

species: Photobacterium damselae


description: domain/bacteria

description: ASM1560244v1 assembly for Photobacterium damselae DSM 110634


description: domain/bacteria

full scientific name: Pseudolactococcus hodotermopsidis (Noda et al. 2020) Abe et al. 2025

species: Pseudolactococcus hodotermopsidis

synonym: Lactococcus hodotermopsidis

full scientific name: Lactococcus hodotermopsidis Noda et al. 2020

species: Lactococcus hodotermopsidis

description: Lactococcus hodotermopsidis Hs30E4_3 gene for 16S ribosomal RNA, partial sequence

description: ASM1117008v1 assembly for Pseudolactococcus hodotermopsidis Hs30E4-3


description: domain/bacteria

family: Microbacteriaceae

full scientific name: Leucobacter epilobiisoli Hou et al. 2018

genus: Leucobacter

species: Leucobacter epilobiisoli

description: Leucobacter sp. strain SYP-B2667 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Nocardiaceae

full scientific name: Rhodococcus opacus Klatte et al. 1995

genus: Rhodococcus

order: Mycobacteriales

species: Rhodococcus opacus

synonym: Rhodococcus percolatus

synonym: Rhodococcus imtechensis

description: R.opacus 16S rRNA gene, strain 1CP

description: ASM168560v1 assembly for Rhodococcus opacus 1CP


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus pacificus Volokhov et al. 2021

genus: Streptococcus

species: Streptococcus pacificus


description: domain/bacteria

family: Micromonosporaceae

full scientific name: Micromonospora matsumotoensis corrig. (Asano et al. 1989) Lee et al. 2000

genus: Micromonospora

order: Micromonosporales

species: Micromonospora matsumotoensis

synonym: Catellatospora matsumotoense

synonym: Micromonospora matsumotoense

synonym: Catellatospora matsumotoensis

full scientific name: Micromonospora matsumotoense (Asano et al. 1989) Lee et al. 2000

species: Micromonospora matsumotoense


description: domain/bacteria

family: Dermacoccaceae

full scientific name: <I>Barrientosiimonas</I> Lee et al. 2013

genus: Barrientosiimonas

species: Barrientosiimonas sp.

synonym: Tamlicoccus

full scientific name: Barrientosiimonas sp.


description: domain/bacteria

family: Thermoanaerobacteraceae

full scientific name: <I>Thermoanaerobacter</I> Wiegel and Ljungdahl 1982

genus: Thermoanaerobacter

order: Thermoanaerobacterales

species: Thermoanaerobacter sp.

synonym: Thermoanaerobium

synonym: Acetogenium

synonym: Thermobacteroides

full scientific name: Thermoanaerobacter sp.

strain designation: PCO

description: Thermoanaerobacter sp. PCO partial 16S rRNA gene, strain PCO


description: domain/bacteria

family: Actinomycetaceae

full scientific name: <I>Arcanobacterium</I> Collins et al. 1983

genus: Arcanobacterium

order: Actinomycetales

species: Arcanobacterium sp.

full scientific name: Arcanobacterium sp.


description: domain/bacteria

full scientific name: Streptococcus vicugnae Volokhov et al. 2021

order: Lactobacillales

species: Streptococcus vicugnae

description: ASM1646170v1 assembly for Streptococcus vicugnae SL1232


description: domain/bacteria

description: ASM435273v1 assembly for Streptococcus vicugnae KCJ4950


description: domain/bacteria

family: Bacillaceae

full scientific name: Alkalibacillus aidingensis Li et al. 2022

genus: Alkalibacillus

order: Caryophanales

species: Alkalibacillus aidingensis

description: ASM1459594v1 assembly for Alkalibacillus aidingensis YIM 98829


description: domain/bacteria

family: Sporolactobacillaceae

full scientific name: Pullulanibacillus naganoensis (Tomimura et al. 1990) Hatayama et al. 2006

genus: Pullulanibacillus

species: Pullulanibacillus naganoensis

synonym: Bacillus naganoensis

description: Pullulanibacillus sp. D' C-1 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lactobacillus gallinarum Fujisawa et al. 1992

genus: Lactobacillus

species: Lactobacillus gallinarum

description: Lactobacillus gallinarum strain ClaCZ63 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Lactobacillus parakefiri corrig. Takizawa et al. 1994

species: Lactobacillus parakefiri

synonym: Lactobacillus parakefir

synonym: Lentilactobacillus parakefiri

full scientific name: Lentilactobacillus parakefiri (Takizawa et al. 1994) Zheng et al. 2020

genus: Lentilactobacillus

species: Lentilactobacillus parakefiri


description: domain/bacteria

full scientific name: Rhodococcus xishaensis Zhang et al. 2021

species: Rhodococcus xishaensis

full scientific name: Rhodococcus xishaensis Zhang, D., Su, Z.-Y., Li, L., Tang, W.-Z.

description: ASM401182v1 assembly for Rhodococcus xishaensis LHW51113


description: domain/bacteria

full scientific name: Salicibibacter cibi Oh et al. 2021

genus: Salicibibacter

species: Salicibibacter cibi

description: ASM1649586v1 assembly for Salicibibacter cibi NKC21-4


description: domain/bacteria

family: Planctomycetaceae

full scientific name: Planctopirus ephydatiae Kohn et al. 2020

genus: Planctopirus

order: Planctomycetales

phylum: Planctomycetota

species: Planctopirus ephydatiae

phylum: Planctomycetes

description: Planctopirus ephydatiae strain spb1 16S ribosomal RNA gene, partial sequence

description: ASM775234v1 assembly for Planctopirus ephydatiae spb1


description: domain/bacteria

family: Listeriaceae

full scientific name: Listeria valentina Quereda et al. 2020

genus: Listeria

phylum: Bacillota

species: Listeria valentina

synonym: Mesolisteria valentina

strain designation: LISVAL109, LISVAL 109

description: Listeria valentina strain CLIP 2019/00642 16S ribosomal RNA gene, partial sequence

description: ASM1180075v1 assembly for Listeria valentina CLIP 2019/00642


description: domain/archaea

family: Methanomicrobiaceae

full scientific name: Methanofollis fontis Chen et al. 2020

genus: Methanofollis

order: Methanomicrobiales

species: Methanofollis fontis

description: Methanofollis fontis strain FWC-SCC2 16S ribosomal RNA gene, partial sequence

description: ASM429718v1 assembly for Methanofollis fontis FWC-SCC2


class: Desulfovibrionia

description: domain/bacteria

family: Desulfovibrionaceae

full scientific name: Nitratidesulfovibrio liaohensis (Wan et al. 2021) Park et al. 2023

genus: Nitratidesulfovibrio

order: Desulfovibrionales

phylum: Thermodesulfobacteriota

species: Nitratidesulfovibrio liaohensis

synonym: Cupidesulfovibrio liaohensis

class: Deltaproteobacteria

full scientific name: Cupidesulfovibrio liaohensis Wan et al. 2021

genus: Cupidesulfovibrio

species: Cupidesulfovibrio liaohensis

description: Nitratidesulfovibrio liaohensis strain XJ01 16S ribosomal RNA gene, partial sequence

description: ASM1168207v1 assembly for Nitratidesulfovibrio liaohensis XJ01


class: Gammaproteobacteria

description: domain/bacteria

family: Piscirickettsiaceae

full scientific name: Thiosulfativibrio zosterae Mochizuki et al. 2022

genus: Thiosulfativibrio

order: Beggiatoales

species: Thiosulfativibrio zosterae

full scientific name: Thiosulfativibrio zosterae Mochizuki et al. 2021

order: Thiotrichales

description: Thiosulfativibrio zosterae AkT22 gene for 16S ribosomal RNA, partial sequence

description: ASM1139815v1 assembly for Thiosulfativibrio zosterae AkT22


description: domain/bacteria

family: Oscillospiraceae

full scientific name: Ruminiclostridium herbifermentans Rettenmaier et al. 2021

genus: Ruminiclostridium

species: Ruminiclostridium herbifermentans

phylum: Firmicutes

description: Ruminiclostridium herbifermentans strain MA18 16S ribosomal RNA gene, partial sequence

description: ASM547390v2 assembly for Ruminiclostridium herbifermentans MA18


description: domain/bacteria

full scientific name: Rhodococcus spongiicola Zhang et al. 2021

genus: Rhodococcus

phylum: Actinomycetota

species: Rhodococcus spongiicola

full scientific name: Rhodococcus spongiicola Zhang, D., Su, Z.-Y., Li, L., Tang, W.-Z.

description: ASM401183v1 assembly for Rhodococcus spongiicola LHW50502


description: domain/bacteria

full scientific name: Pseudodesulfovibrio mercurii Gilmour et al. 2021

genus: Pseudodesulfovibrio

species: Pseudodesulfovibrio mercurii

description: Desulfovibrio desulfuricans strain ND132 16S ribosomal RNA gene, partial sequence

description: ASM18929v2 assembly for Pseudodesulfovibrio mercurii ND132


description: domain/bacteria

family: Clostridiaceae

full scientific name: Thermobrachium celere Engle et al. 1996

genus: Thermobrachium

species: Thermobrachium celere

synonym: Caloramator celer

strain designation: Kha Sph, Sph

description: Bacterium SPh 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: Pseudonocardia yunnanensis (Jiang et al. 1991) Huang et al. 2002

genus: Pseudonocardia

species: Pseudonocardia yunnanensis

synonym: Actinobispora yunnanensis

phylum: Actinobacteria

description: Actinobispora yunnanensis 16S ribosomal RNA gene, partial sequence

description: Actinobispora yunnanensis 16S rRNA gene, strain IMSNU 22019T

description: Pseudonocardia yunnanensis gene for 16S ribosomal RNA, partial sequence

description: Pseudonocardia yunnanensis strain YIM 11981 16S ribosomal RNA gene, partial sequence

description: ASM3953406v1 assembly for Pseudonocardia yunnanensis JCM 9330

description: ASM4267768v1 assembly for Pseudonocardia yunnanensis CGMCC 4.1542


description: domain/bacteria

family: Actinomycetales, not assigned to family

full scientific name: <I>Aquiluna</I> Pitt et al. 2021

genus: Aquiluna

species: Aquiluna sp.

class: Not assigned to order

full scientific name: Aquiluna sp.

order: Not assigned to order

phylum: Not assigned to order


description: domain/bacteria

family: Propionibacteriaceae

full scientific name: Microlunatus speluncae Xie et al. 2020

genus: Microlunatus

species: Microlunatus speluncae

description: Microlunatus speluncae 16S ribosomal RNA gene, partial sequence

description: ASM929983v1 assembly for Microlunatus speluncae SYSU K12189


description: domain/bacteria

family: Paenibacillaceae

full scientific name: <I>Paenibacillus</I> Ash et al. 1994

genus: Paenibacillus

species: Paenibacillus sp.

synonym: Aerobacillus

full scientific name: Paenibacillus sp.

description: ASM37418v1 assembly for Paenibacillus sp. HW567


description: domain/bacteria


description: domain/bacteria

description: Paenibacillus sp. BF92 partial 16S rRNA gene, strain BF92


description: domain/bacteria

description: Paenibacillus sp. YIM 110206 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

strain designation: CQ-X

description: Paenibacillus sp. CQ-X 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Paenibacillus sp. I12B-00842 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Paenibacillus sp. I12B-00753 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Paenibacillus sp. I12B-00846 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Paenibacillus sp. I12B-00767 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Paenibacillus sp. GD6 16S ribosomal RNA gene, partial sequence


culture collection no.: DSM 26193, SCSIO NO257

description: domain/bacteria


description: domain/bacteria

description: Paenibacillus sp. SCSIO 04123 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Paenibacillus sp. SCSIO 04534 16S ribosomal RNA gene, partial sequence.


culture collection no.: DSM 26478, SCSIO DS0031

description: domain/bacteria


description: domain/bacteria

description: Paenibacillus sp. DSM 27214 partial 16S rRNA gene, strain DSM 27214


description: domain/bacteria

description: Paenibacillus numidis assembly for Paenibacillus sp. GM2


description: domain/bacteria

description: Paenibacillus sp. TMCC 8228 16S rRNA gene, partial sequence.


description: domain/bacteria

full scientific name: Paenibacillus rubinfantis Pham et al. 2017

species: Paenibacillus rubinfantis

strain designation: mt 18


description: domain/bacteria


culture collection no.: DSM 102801, Marseille-P2472

description: domain/bacteria

full scientific name: Paenibacillus tuaregi Pham et al. 2017

species: Paenibacillus tuaregi

description: Paenibacillus sp. Marseille-P2472 partial 16S rRNA gene, strain Marseille-P2472T

description: PRJEB13948 assembly for Paenibacillus tuaregi Marseille-P2472


culture collection no.: DSM 103972, Marseille-P3071

description: domain/bacteria

full scientific name: Paenibacillus bouchesdurhonensis Pham et al. 2017

species: Paenibacillus bouchesdurhonensis

description: Paenibacillus sp. Marseille-P3071 partial 16S rRNA gene, strain Marseille-P3071

description: Paenibacillus bouchesdurhonensis assembly for Paenibacillus bouchesdurhonensis Marseille-P3071


description: domain/bacteria

description: Paenibacillus sp. strain 23TSA30-6 16S ribosomal RNA gene, partial sequence

description: ASM1485858v1 assembly for Paenibacillus sp. 23TSA30-6


description: domain/bacteria

description: Paenibacillus sp. 28ISP30-2 16S ribosomal RNA gene, partial sequence

description: ASM1485860v1 assembly for Paenibacillus sp. 28ISP30-2


class: Planctomycetia

description: domain/bacteria

full scientific name: Gimesia fumaroli Wiegand et al. 2021

genus: Gimesia

species: Gimesia fumaroli

full scientific name: Gimesia fumaroli

strain designation: Enrichment17, Enr17

description: Gimesia fumaroli strain Enr17 16S ribosomal RNA gene, partial sequence

description: ASM775442v1 assembly for Gimesia fumaroli Enr17


description: domain/bacteria

full scientific name: Bilophila wadsworthia Baron et al. 1990

genus: Bilophila

species: Bilophila wadsworthia

description: Desulfovibrionaceae bacterium strain ClaCZ104 16S ribosomal RNA gene, partial sequence


class: Aquificia

description: domain/bacteria

family: Desulfurobacteriaceae

full scientific name: Desulfurobacterium thermolithotrophum L'Haridon et al. 1998

genus: Desulfurobacterium

keyword: phylum/aquificota

order: Desulfurobacteriales

phylum: Aquificota

species: Desulfurobacterium thermolithotrophum

class: Aquificae

phylum: Aquificae

description: Desulfurobacterium sp. HR11 16S ribosomal RNA gene, partial sequence

description: ASM1058830v2 assembly for Desulfurobacterium thermolithotrophum HR11


class: Alphaproteobacteria

description: domain/bacteria

family: Sphingomonadaceae

full scientific name: Sphingomonas aliaeris Heidler von Heilborn et al. 2021

genus: Sphingomonas

order: Sphingomonadales

phylum: Pseudomonadota

species: Sphingomonas aliaeris

synonym: Parasphingomonas aliaeris

full scientific name: Sphingomonas aliaeris

phylum: Proteobacteria

description: ASM1674381v1 assembly for Sphingomonas aliaeris DH-S5


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium comes Schaffert et al. 2021

genus: Corynebacterium

species: Corynebacterium comes

full scientific name: Corynebacterium comes Schaffert et al., 2021

description: Corynebacterium comes strain 2019 16S ribosomal RNA gene, partial sequence

description: ASM973440v1 assembly for Corynebacterium comes 2019


description: domain/bacteria

family: Streptosporangiaceae

full scientific name: <I>Microbispora</I> Nonomura and Ohara 1957 (Approved Lists 1980)

genus: Microbispora

order: Streptosporangiales

species: Microbispora sp.

full scientific name: Microbispora sp.


description: domain/bacteria

full scientific name: Microbispora clausenae Kaewkla et al. 2020

species: Microbispora clausenae

full scientific name: Microbispora clausenae Kaewkla O, Koomsiri W, Thamchaipenet A, Franco CMM, 2020

description: Microbispora clausenae strain CLES2 16S ribosomal RNA gene, partial sequence

description: ASM1387060v1 assembly for Microbispora clausenae CLES2


description: domain/bacteria

family: Microbacteriaceae

full scientific name: <I>Humibacter</I> Vaz-Moreira et al. 2008

genus: Humibacter

order: Micrococcales

species: Humibacter sp.

full scientific name: Humibacter sp.


description: domain/bacteria

family: Alicyclobacillaceae

full scientific name: <I>Alicyclobacillus</I> Wisotzkey et al. 1992

genus: Alicyclobacillus

species: Alicyclobacillus sp.

synonym: Paenalicyclobacillus

full scientific name: Alicyclobacillus sp.

strain designation: KRSM 9503


description: domain/bacteria

description: Alicyclobacillus sp. FP1 16S ribosomal RNA gene, partial sequence