description: domain/bacteria

family: Microbacteriaceae

full scientific name: <I>Pseudoclavibacter</I> Manaia et al. 2004

genus: Pseudoclavibacter

species: Pseudoclavibacter sp.

synonym: Caespitibacter

synonym: Zimmermannella

full scientific name: Pseudoclavibacter sp.

strain designation: Sa 8a


Matching level: species

class: Actinomycetes

description: domain/bacteria

domain: Bacteria

keyword: phylum/actinomycetota

order: Micrococcales

phylum: Actinomycetota

class: Actinobacteria

phylum: Actinobacteria

type strain: no


description: domain/bacteria

database: nuccore

description: Pseudoclavibacter sp. JSM 2175001 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

full scientific name: Microbacterium pullorum Pallen 2024

genus: Microbacterium

species: Microbacterium pullorum

synonym: Microbacterium pullorum

full scientific name: Microbacterium pullorum

assembly level: scaffold

description: ASM1483653v1 assembly for Microbacterium pullorum Sa4CUA7


description: domain/bacteria

full scientific name: <I>Subtercola</I> Männistö et al. 2000

genus: Subtercola

species: Subtercola sp.

full scientific name: Subtercola sp.


description: domain/bacteria

family: Demequinaceae

full scientific name: <I>Demequina</I> Yi et al. 2007

genus: Demequina

species: Demequina sp.

synonym: Lysinimicrobium

full scientific name: Demequina sp.

description: Demequina sp. EGI 80499 16S ribosomal RNA gene, partial sequence.


class: Bacteroidia

description: domain/bacteria

family: Bacteroidaceae

full scientific name: Phocaeicola dorei (Bakir et al. 2006) García-López et al. 2020

genus: Phocaeicola

keyword: phylum/bacteroidota

order: Bacteroidales

phylum: Bacteroidota

species: Phocaeicola dorei

synonym: Bacteroides dorei

phylum: Bacteroidetes


class: Bacilli

description: domain/bacteria

family: Bacillaceae

full scientific name: <I>Gracilibacillus</I> Wainø et al. 1999

genus: Gracilibacillus

keyword: phylum/bacillota

order: Caryophanales

phylum: Bacillota

species: Gracilibacillus sp.

full scientific name: Gracilibacillus sp.

phylum: Firmicutes


class: Flavobacteriia

description: domain/bacteria

family: Flavobacteriaceae

full scientific name: <I>Cellulophaga</I> Johansen et al. 1999

genus: Cellulophaga

order: Flavobacteriales

species: Cellulophaga sp.

synonym: Paracellulophaga

full scientific name: Cellulophaga sp.

assembly level: contig

description: ASM79956v1 assembly for Cellulophaga sp. Hel_I_12


description: domain/bacteria

assembly level: complete

description: ASM1927856v1 assembly for Cellulophaga sp. HaHa_2_95


description: domain/bacteria

description: ASM1927858v1 assembly for Cellulophaga sp. HaHa_2_1


description: domain/bacteria

description: ASM1902192v1 assembly for Cellulophaga sp. HaHaR_3_176


class: Desulfobulbia

description: domain/bacteria

family: Desulfocapsaceae

full scientific name: Desulfofustis limnaeus Watanabe et al. 2025

genus: Desulfofustis

keyword: phylum/thermodesulfobacteriota

order: Desulfobulbales

phylum: Thermodesulfobacteriota

species: Desulfofustis limnaeus

class: Deltaproteobacteria

family: Desulfobulbaceae

full scientific name: Desulfofustis limnaeus

order: Desulfobacterales

phylum: Proteobacteria

strain designation: PPLL

type strain: yes

description: Desulfobulbaceae bacterium PPLL gene for 16S ribosomal RNA, partial sequence


class: Alphaproteobacteria

description: domain/bacteria

family: Caulobacteraceae

full scientific name: <I>Brevundimonas</I> Segers et al. 1994

genus: Brevundimonas

keyword: phylum/pseudomonadota

order: Caulobacterales

phylum: Pseudomonadota

species: Brevundimonas sp.

full scientific name: Brevundimonas sp.


description: domain/bacteria

full scientific name: <I>Thalassobacillus</I> García et al. 2005

genus: Thalassobacillus

species: Thalassobacillus sp.

full scientific name: Thalassobacillus sp.


class: Gammaproteobacteria

description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Kosakonia cowanii (Inoue et al. 2001) Brady et al. 2013

genus: Kosakonia

order: Enterobacterales

species: Kosakonia cowanii

synonym: Enterobacter cowanii

description: Kosakonia cowanii strain DSM 111930 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Prevotellaceae

full scientific name: Prevotella copri Hayashi et al. 2007

genus: Prevotella

species: Prevotella copri

synonym: Segatella copri

class: Not assigned to order

family: Not assigned to family

full scientific name: Segatella copri (Hayashi et al. 2007) Hitch et al. 2023

genus: Segatella

order: Not assigned to order

phylum: Not assigned to order

species: Segatella copri

strain designation: P4E5, HDE04

description: P4E assembly for Segatella copri HDE04


description: domain/bacteria

strain designation: P3A, HDA03

description: ASM1924985v1 assembly for Segatella copri


description: domain/bacteria

strain designation: P1B, HDB01

description: ASM1924982v1 assembly for Segatella copri


description: domain/bacteria

strain designation: P1C, HDC01

assembly level: chromosome

description: P1C_raw assembly for Segatella copri HDC01


description: domain/bacteria

strain designation: P4D, HDD04

description: P4D assembly for Segatella copri HDD04


description: domain/bacteria

description: ASM1924986v1 assembly for Segatella copri HDA04


description: domain/bacteria


description: domain/bacteria

description: ASM1924965v2 assembly for Segatella copri HDE06


description: domain/bacteria

description: ASM1924971v1 assembly for Segatella copri RPA01


description: domain/bacteria

description: ASM1924963v1 assembly for Segatella copri RHA03


description: domain/bacteria

description: HDD05 assembly for Segatella copri HDD05


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: <I>Saccharopolyspora</I> Lacey and Goodfellow 1975 (Approved Lists 1980)

genus: Saccharopolyspora

order: Pseudonocardiales

species: Saccharopolyspora sp.

synonym: Faenia

full scientific name: Saccharopolyspora sp.


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Macrococcus armenti Keller et al. 2022

genus: Macrococcus

species: Macrococcus armenti

synonym: Macrococcoides armenti

description: ASM2280801v1 assembly for Macrococcus armenti CCM 2609


description: domain/bacteria

full scientific name: Microbacterium gallinarum Pallen 2024

species: Microbacterium gallinarum

synonym: Microbacterium gallinarum

full scientific name: Microbacterium commune

species: Microbacterium commune


class: Betaproteobacteria

description: domain/bacteria

family: Alcaligenaceae

full scientific name: <I>Pigmentiphaga</I> Blümel et al. 2001

genus: Pigmentiphaga

order: Burkholderiales

species: Pigmentiphaga sp.

full scientific name: Pigmentiphaga sp.


description: domain/bacteria

family: Propionibacteriaceae

full scientific name: <I>Microlunatus</I> Nakamura et al. 1995

genus: Microlunatus

order: Propionibacteriales

species: Microlunatus sp.

synonym: Friedmanniella

full scientific name: Microlunatus sp.

description: Microlunatus sp. strain YIM 130686 16S ribosomal RNA gene, partial sequence.


culture collection no.: DSM 103939, Marseille P3245

class: Coriobacteriia

description: domain/bacteria

family: Coriobacteriaceae

full scientific name: Collinsella phocaeensis Ndongo et al. 2017

genus: Collinsella

order: Coriobacteriales

species: Collinsella phocaeensis

description: Collinsella phocaeensis partial 16S rRNA gene, type strain Marseille-P3245T

description: PRJEB18019 assembly for Collinsella phocaeensis Marseille-P3245


Matching level: subspecies

class: Spirochaetia

family: Treponemataceae

full scientific name: Treponema medium subsp. bovis

genus: Treponema

phylum: Spirochaetes

species: Treponema medium subsp. bovis


description: domain/bacteria

family: Cellulomonadaceae

full scientific name: <I>Actinotalea</I> Yi et al. 2007

genus: Actinotalea

species: Actinotalea sp.

full scientific name: Actinotalea sp.


class: Nanobdellia

description: domain/archaea

domain: Archaea

family: Nanobdellaceae

full scientific name: Nanobdella aerobiophila Kato et al. 2022

genus: Nanobdella

keyword: phylum/nanobdellota

order: Nanobdellales

phylum: Nanobdellota

species: Nanobdella aerobiophila

full scientific name: Nanobdella aerobiophila

description: ASM2316954v1 assembly for Nanobdella aerobiophila MJ1


description: domain/bacteria

full scientific name: <I>Gillisia</I> Van Trappen et al. 2004

genus: Gillisia

species: Gillisia sp.

full scientific name: Gillisia sp.

description: ASM74427v1 assembly for Gillisia sp. Hel_I_29


description: domain/bacteria

description: ASM782727v1 assembly for Gillisia sp. Hel_I_86


description: domain/bacteria

family: Vibrionaceae

full scientific name: Vibrio splendidus (Beijerinck 1900) Baumann et al. 1981

genus: Vibrio

order: Vibrionales

species: Vibrio splendidus

synonym: Photobacter splendidum

synonym: Beneckea splendida

synonym: Vibrio hemicentroti

description: ASM287646v1 assembly for Vibrio splendidus 10N.222.46.C2


description: domain/bacteria

description: ASM287509v1 assembly for Vibrio splendidus 10N.222.46.B6


description: domain/bacteria

description: ASM287277v2 assembly for Vibrio splendidus 10N.286.45.B3


description: domain/bacteria

description: ASM287599v1 assembly for Vibrio splendidus 10N.261.48.B5


description: domain/bacteria

description: ASM287752v1 assembly for Vibrio splendidus 10N.286.45.A10


description: domain/bacteria

description: ASM287719v2 assembly for Vibrio splendidus 10N.261.52.F2


culture collection no.: DSM 103636, Marseille-P3108

description: domain/bacteria

family: Bacteroidaceae

full scientific name: Bacteroides mediterraneensis Andrieu et al. 2018

genus: Bacteroides

species: Bacteroides mediterraneensis

synonym: Bacteroides mediterraneensis

full scientific name: Bacteroides ndongoniae Andrieu et al. 2018

species: Bacteroides ndongoniae


culture collection no.: DSM 103033, Marseille-P2644

description: domain/bacteria


description: domain/bacteria

full scientific name: <I>Propioniciclava</I> Sugawara et al. 2011

genus: Propioniciclava

species: Propioniciclava sp.

synonym: Brevilactibacter

full scientific name: Propioniciclava sp.

description: Propioniciclava sp. SCSIO 13291 16S ribosomal RNA gene, partial sequence.


class: Synergistia

description: domain/bacteria

family: Dethiosulfovibrionaceae

full scientific name: Dethiosulfovibrio faecalis Grabowski et al. 2022

genus: Dethiosulfovibrio

keyword: phylum/synergistota

order: Synergistales

phylum: Synergistota

species: Dethiosulfovibrio faecalis

family: Synergistaceae

full scientific name: Dethiosulfovibrio faecalis

phylum: Synergistetes

description: Dethiosulfovibrio sp. F2B 16S ribosomal RNA gene, partial sequence

description: ASM2156879v1 assembly for Dethiosulfovibrio faecalis F2B


class: Chroococcophyceae

description: domain/bacteria

family: Oculatellaceae

full scientific name: Toxifilum mysidocida Zimba et al. 2017

genus: Toxifilum

keyword: phylum/cyanobacteriota

order: Oculatellales

phylum: Cyanobacteriota

species: Toxifilum mysidocida

class: Cyanophyceae

family: Pseudanabaenaceae

order: Synechococcales

phylum: Cyanobacteria

description: ASM1688813v1 assembly for Leptolyngbya sp. CCY15150


class: Chlamydiia

description: domain/bacteria

family: Chlamydiaceae

full scientific name: <I>Chlamydia</I> Jones et al. 1945 (Approved Lists 1980)

genus: Chlamydia

keyword: phylum/chlamydiota

order: Chlamydiales

phylum: Chlamydiota

species: Chlamydia sp.

synonym: Chlamydophila

full scientific name: Chlamydia sp.

phylum: Chlamydiae


description: domain/bacteria

full scientific name: Chlamydia serpentis Staub et al. 2018

species: Chlamydia serpentis

description: Chlamydia sp. nov. H15-1957-10C assembly for Chlamydia serpentis H15-1957-10C


class: Actinomycetes

description: domain/bacteria

family: Allobogoriellaceae

full scientific name: Oceanitalea stevensii Pallen 2024

genus: Oceanitalea

order: Micrococcales

phylum: Actinomycetota

species: Oceanitalea stevensii

synonym: Oceanitalea stevensii

class: Actinobacteria

family: Bogoriellaceae

full scientific name: Oceanitalea stevensii

phylum: Actinobacteria

description: ASM1483710v1 assembly for Oceanitalea stevensii Sa1BUA1


class: Deferribacteres

description: domain/bacteria

family: Deferribacteraceae

full scientific name: Mucispirillum schaedleri Robertson et al. 2005

genus: Mucispirillum

keyword: phylum/deferribacterota

order: Deferribacterales

phylum: Deferribacterota

species: Mucispirillum schaedleri

phylum: Deferribacteres

description: Mucispirillum schaedleri strain DSM 104751 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Mycobacteriaceae

genus: Mycobacterium

order: Mycobacteriales

synonym: Mycobacteroides abscessus subsp. massiliense

synonym: Mycobacterium massiliense

full scientific name: Mycobacterium abscessus subsp. massiliense (Adékambi et al. 2006) Tortoli et al. 2016 emend. Nouioui et al. 2018


description: domain/bacteria

full scientific name: Mycobacterium abscessus subsp. massiliense (Adékambi et al. 2006) Tortoli et al. 2016


class: Bacteroidia

description: domain/bacteria

family: Tannerellaceae

full scientific name: Parabacteroides goldsteinii (Song et al. 2006) Sakamoto and Benno 2006

genus: Parabacteroides

order: Bacteroidales

phylum: Bacteroidota

species: Parabacteroides goldsteinii

synonym: Bacteroides goldsteinii

phylum: Bacteroidetes

description: Parabacteroides goldsteinii strain DSM 111136 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

full scientific name: Photobacterium ganghwense Park et al. 2006

genus: Photobacterium

species: Photobacterium ganghwense

phylum: Proteobacteria

description: ASM1732954v1 assembly for Photobacterium ganghwense C2.2


description: domain/bacteria

family: Propionibacteriaceae

full scientific name: <I>Luteococcus</I> Tamura et al. 1994

genus: Luteococcus

species: Luteococcus sp.

full scientific name: Luteococcus sp.


class: Bacilli

description: domain/bacteria

family: Bacillaceae

full scientific name: Bacillus safensis subsp. safensis (Satomi et al. 2006) Abril et al. 2019

genus: Bacillus

order: Caryophanales

phylum: Bacillota

species: Bacillus safensis subsp. safensis

phylum: Firmicutes


family: Pseudomonadaceae

full scientific name: Pseudomonas ibbmi

genus: Pseudomonas

species: Pseudomonas ibbmi


family: Rhodobacteraceae

full scientific name: Rhodobacteraceae (not further classified)

genus: Rhodobacteraceae


species: Rhodobacteraceae (not further classified)


family: Not assigned to family

full scientific name: Flavobacteriaceae not further classified

genus: Flavobacteriaceae

phylum: Not assigned to order


species: Flavobacteriaceae not further classified


culture collection no.: DSM 29156, JXJ CY24

description: domain/bacteria

family: Micrococcaceae

full scientific name: <I>Citricoccus</I> Altenburger et al. 2002

genus: Citricoccus

species: Citricoccus sp.

full scientific name: Citricoccus sp.


family: Actinobacteria, not assigned to family

full scientific name: Actinobacteria sp.

genus: Actinobacteria

species: Actinobacteria sp.


description: domain/bacteria

family: Staphylococcaceae

full scientific name: <I>Jeotgalicoccus</I> Yoon et al. 2003

genus: Jeotgalicoccus

species: Jeotgalicoccus sp.

full scientific name: Jeotgalicoccus sp.

description: Jeotgalicoccus sp. 13MG44_air partial 16S rRNA gene, isolate 13MG44_air


culture collection no.: DSM 103061, Marseille-P2731

description: domain/bacteria

family: Microbacteriaceae

full scientific name: <I>Agrococcus</I> Groth et al. 1996

genus: Agrococcus

species: Agrococcus sp.

full scientific name: Agrococcus sp.

description: Agrococcus sp. Marseille-P2731 partial 16S rRNA gene, strain Marseille-P2731

description: Agrococcus sp. strain Marseille-P2731 16S ribosomal RNA gene, partial sequence.

description: PRJEB17684 assembly for Agrococcus sp. Marseille-P2731


description: domain/bacteria

family: Treponemataceae

full scientific name: Treponema phagedenis (ex Brumpt 1922) Kuhnert et al. 2020

genus: Treponema

keyword: phylum/spirochaetota

order: Spirochaetales

phylum: Spirochaetota

species: Treponema phagedenis

full scientific name: Treponema phagedenis (ex Brumpt 1922) Smibert 1984

phylum: Spirochaetes


class: Flavobacteriia

description: domain/bacteria

family: Flavobacteriaceae

full scientific name: <I>Salegentibacter</I> McCammon and Bowman 2000

genus: Salegentibacter

order: Flavobacteriales

species: Salegentibacter sp.

full scientific name: Salegentibacter sp.

strain designation: Hel_I_6, Hel1_6

description: ASM74531v1 assembly for Salegentibacter sp. Hel_I_6


description: domain/bacteria

full scientific name: <I>Amnibacterium</I> Kim and Lee 2011

genus: Amnibacterium

species: Amnibacterium sp.

full scientific name: Amnibacterium sp.


class: Alphaproteobacteria

description: domain/bacteria

family: Acetobacteraceae

full scientific name: <I>Roseomonas</I> Rihs et al. 1998

genus: Roseomonas

order: Rhodospirillales

phylum: Pseudomonadota

species: Roseomonas sp.

synonym: Pseudoroseomonas

full scientific name: Roseomonas sp.


description: domain/bacteria

family: Paracoccaceae

full scientific name: Thermohalobaculum xanthum Pan et al. 2024

genus: Thermohalobaculum

order: Rhodobacterales

species: Thermohalobaculum xanthum

full scientific name: Thermohalobaculum xanthum Pan et al.

description: ASM1662349v1 assembly for Thermohalobaculum xanthum M0105


class: Gammaproteobacteria

description: domain/bacteria

family: Legionellaceae

full scientific name: Legionella bononiensis Girolamini et al. 2022

genus: Legionella

order: Legionellales

species: Legionella bononiensis

full scientific name: Legionella sp.

species: Legionella sp.


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Limosilactobacillus urinaemulieris Ksiezarek et al. 2021

genus: Limosilactobacillus

order: Lactobacillales

species: Limosilactobacillus urinaemulieris

description: Limosilactobacillus urinaemulieris strain DSM 106190 16S ribosomal RNA gene, partial sequence.


class: Mollicutes

description: domain/bacteria

family: Mycoplasmataceae

full scientific name: Mycoplasma zalophi Haulena et al. 2006

genus: Mycoplasma

keyword: phylum/mycoplasmatota

order: Mycoplasmatales

phylum: Mycoplasmatota

species: Mycoplasma zalophi

phylum: Tenericutes

description: Mycoplasma zalophi strain CSL 4296 16S ribosomal RNA gene, partial sequence 16S-23S ribosomal RNA intergenic spacer, complete sequence and 23S ribosomal RNA gene, partial sequence.

description: ASM2548633v1 assembly for Mycoplasma zalophi CSL 4296


description: domain/bacteria


description: domain/bacteria

full scientific name: <I>Pontibacillus</I> Lim et al. 2005

genus: Pontibacillus

species: Pontibacillus sp.

full scientific name: Pontibacillus sp.


description: domain/bacteria

full scientific name: <I>Lacinutrix</I> Bowman and Nichols 2005

genus: Lacinutrix

species: Lacinutrix sp.

synonym: Flavirhabdus

full scientific name: Lacinutrix sp.

description: ASM93468v1 assembly for Lacinutrix sp. Hel_I_90 Hel_I _90


class: Planctomycetia

description: domain/bacteria

family: Planctomycetaceae

full scientific name: Gimesia panareensis Wiegand et al. 2021

genus: Gimesia

keyword: phylum/planctomycetota

order: Planctomycetales

phylum: Planctomycetota

species: Gimesia panareensis

full scientific name:
Gimesia panareensis Wiegand et al. 2020
Oren and Garrity 2021

phylum: Planctomycetes

description: ASM774801v1 assembly for Gimesia panareensis Pan110


description: domain/bacteria

family: Nocardiaceae

full scientific name: Rhodococcus erythropolis (Gray and Thornton 1928) Goodfellow and Alderson 1979 (Approved Lists 1980)

genus: Rhodococcus

phylum: Actinomycetota

species: Rhodococcus erythropolis

synonym: Rhodococcus jialingiae

synonym: Rhodococcus degradans

synonym: Rhodococcus qingshengii

synonym: Nocardia erythropolis

synonym: Rhodococcus enclensis

synonym: Mycobacterium erythropolis

synonym: Rhodococcus baikonurensis

synonym: Nocardia calcarea

synonym: Arthrobacter picolinophilus

full scientific name: Rhodococcus qingshengii Xu et al. 2007 emend. Nouioui et al. 2018

order: Not assigned to order

species: Rhodococcus qingshengii


description: domain/bacteria

full scientific name: Mycoplasma phocoeninasale Volokhov et al. 2022

species: Mycoplasma phocoeninasale

full scientific name: Mycoplasma phocoeninasale

description: Mycoplasma phocoeninasale strain CSL7498 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence


description: domain/bacteria

full scientific name: <I>Mycoplasma</I> Nowak 1929 (Approved Lists 1980)

species: Mycoplasma sp.

full scientific name: Mycoplasma sp.


description: domain/bacteria

full scientific name: Mycoplasma miroungigenitalium Volokhov et al. 2022

species: Mycoplasma miroungigenitalium


description: domain/bacteria

family: Shewanellaceae

full scientific name: <I>Shewanella</I> MacDonell and Colwell 1986

genus: Shewanella

order: Alteromonadales

species: Shewanella sp.

full scientific name: Shewanella sp.


description: domain/bacteria

description: ASM287361v1 assembly for Shewanella sp. 10N.286.51.B7


description: domain/bacteria

description: ASM287435v2 assembly for Shewanella sp. 10N.286.48.B5


description: domain/bacteria

description: ASM287454v1 assembly for Shewanella sp. 10N.286.52.C2


description: domain/bacteria

family: Bacteroidaceae

full scientific name: Bacteroides xylanisolvens Chassard et al. 2008

genus: Bacteroides

species: Bacteroides xylanisolvens

description: Bacteroides xylanisolvens strain DSM 110079 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Ignatzschineriaceae

full scientific name: Wohlfahrtiimonas chitiniclastica Tóth et al. 2008

genus: Wohlfahrtiimonas

order: Cardiobacteriales

species: Wohlfahrtiimonas chitiniclastica

family: Gammaproteobacteria, not assigned to family

description: ASM1841573v1 assembly for Wohlfahrtiimonas chitiniclastica DSM 105708


description: domain/bacteria

description: ASM1841579v1 assembly for Wohlfahrtiimonas chitiniclastica DSM 105712


description: domain/bacteria

description: ASM1841572v1 assembly for Wohlfahrtiimonas chitiniclastica DSM 105838


description: domain/bacteria

description: ASM1841576v1 assembly for Wohlfahrtiimonas chitiniclastica DSM 105839


description: domain/bacteria

description: ASM1841564v1 assembly for Wohlfahrtiimonas chitiniclastica DSM 105984


description: domain/bacteria

description: ASM1841567v1 assembly for Wohlfahrtiimonas chitiniclastica DSM 108045


description: domain/bacteria

description: ASM1841562v1 assembly for Wohlfahrtiimonas chitiniclastica DSM 108048


description: domain/bacteria

description: ASM1841563v1 assembly for Wohlfahrtiimonas chitiniclastica DSM 110179


description: domain/bacteria

description: ASM1841566v1 assembly for Wohlfahrtiimonas chitiniclastica DSM 110473


class: Betaproteobacteria

description: domain/bacteria

family: Sutterellaceae

full scientific name: Parasutterella muris Afrizal et al. 2025

genus: Parasutterella

order: Burkholderiales

species: Parasutterella muris

full scientific name: Parasutterella excrementihominis Nagai et al. 2009

species: Parasutterella excrementihominis

description: Parasutterella_sp_nov_DSM111000 assembly for Parasutterella muris DSM 111000


description: domain/bacteria

family: Promicromonosporaceae

full scientific name: Paraoerskovia marina Khan et al. 2009

genus: Paraoerskovia

order: Micrococcales

species: Paraoerskovia marina

synonym: Koreibacter algae

full scientific name: Paraoerskovia marina Khan et al. 2009 emend. Schumann et al. 2013

phylum: Actinobacteria


description: domain/bacteria

full scientific name: Phocaeicola sartorii (Clavel et al. 2010) García-López et al. 2020

genus: Phocaeicola

species: Phocaeicola sartorii

synonym: Phocaeicola chinchillae

synonym: Bacteroides sartorii

synonym: Bacteroides chinchillae

description: Phocaeicola sartorii strain DSM 110081 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

full scientific name: Antrihabitans stalagmiti Kim et al. 2022

genus: Antrihabitans

species: Antrihabitans stalagmiti

full scientific name: Antrihabitans stalagmiti Kim, S.-M. et al., 2022

description: ASM1648282v1 assembly for Antrihabitans stalagmiti YC3-6


description: domain/bacteria

family: Tannerellaceae

full scientific name: <I>Parabacteroides</I> Sakamoto and Benno 2006

genus: Parabacteroides

species: Parabacteroides sp.

full scientific name: Parabacteroides sp.


class: Caldilineae

description: domain/bacteria

family: Caldilineaceae

full scientific name: Caldilinea tarbellica Grégoire et al. 2011

genus: Caldilinea

keyword: phylum/chloroflexota

order: Caldilineales

phylum: Chloroflexota

species: Caldilinea tarbellica

phylum: Chloroflexi


description: domain/bacteria

family: Sphingomonadaceae

full scientific name: Binariimonas pacifica Zhao et al. 2025

genus: Binariimonas

order: Sphingomonadales

species: Binariimonas pacifica

full scientific name: Binariimonas pacifica Zhao et al. 2016


class: Clostridia

description: domain/bacteria

family: Clostridiaceae

full scientific name: Clostridium chromiireducens Inglett et al. 2011

genus: Clostridium

order: Eubacteriales

species: Clostridium chromiireducens

description: ASM976788v1 assembly for Clostridium chromiireducens NM79_F5


culture collection no.: DSM 103593, Marseille-P3087

description: domain/bacteria

family: Lachnospiraceae

full scientific name: <I>Blautia</I> Liu et al. 2008

genus: Blautia

species: Blautia sp.

full scientific name: Blautia sp.

description: Blautia sp. Marseille-P3087 partial 16S rRNA gene, strain Marseille-P3087

description: PRJEB18016 assembly for Blautia sp. Marseille-P3087


description: domain/bacteria

family: Microbacteriaceae

genus: Diaminobutyricimonas

species: Diaminobutyricimonas aerilata

full scientific name: Diaminobutyricimonas aerilata Jang et al. 2013 emend. Nouioui et al. 2018


description: domain/bacteria

full scientific name: Bacteroides faecichinchillae Kitahara et al. 2012

order: Bacteroidales

phylum: Bacteroidota

species: Bacteroides faecichinchillae

description: ASM480164v1 assembly for Bacteroides faecichinchillae NM45_B5


description: domain/bacteria

family: Porphyromonadaceae

full scientific name: Macellibacteroides fermentans Jabari et al. 2012

genus: Macellibacteroides

species: Macellibacteroides fermentans

phylum: Bacteroidetes

strain designation: HH-ZS BL40


description: domain/bacteria

family: Bacillaceae

full scientific name: Geomicrobium sediminis Xiong et al. 2014

genus: Geomicrobium

order: Caryophanales

species: Geomicrobium sediminis


description: domain/bacteria

family: Oscillospiraceae

full scientific name: Intestinimonas butyriciproducens Kläring et al. 2013

genus: Intestinimonas

species: Intestinimonas butyriciproducens

description: Intestinimonas butyriciproducens strain AF211 16S ribosomal RNA gene, partial sequence

description: ASM145494v1 assembly for Intestinimonas butyriciproducens AF211


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: <I>Dokdonia</I> Yoon et al. 2005

genus: Dokdonia

order: Flavobacteriales

species: Dokdonia sp.

synonym: Krokinobacter

full scientific name: Dokdonia sp.

description: ASM782728v1 assembly for Dokdonia sp. Hel_I_63


description: domain/bacteria

full scientific name: Hungatella effluvii Kaur et al. 2014

genus: Hungatella

species: Hungatella effluvii

strain designation: Cla-AA-1, AA1, Cell Pet-C-A

description: Hungatella effluvii strain DSM 107394 16S ribosomal RNA gene, partial sequence.


culture collection no.: DSM 103346, Marseille-P2932

description: domain/bacteria

family: Peptoniphilaceae

full scientific name: <I>Peptoniphilus</I> Ezaki et al. 2001

genus: Peptoniphilus

order: Tissierellales

species: Peptoniphilus sp.

synonym: Schleiferella

full scientific name: Peptoniphilus sp.

description: Peptoniphilus sp. Marseille-P2932 partial 16S rRNA gene, strain Marseille-P2932


culture collection no.: DSM 103468, Marseille-P3195

description: domain/bacteria

full scientific name: Aedoeadaptatus urinae Malhotra et al. 2024

genus: Aedoeadaptatus

species: Aedoeadaptatus urinae

synonym: Peptoniphilus urinimassiliensis

synonym: Peptoniphilus urinae


description: domain/bacteria

family: Cellulomonadaceae

full scientific name: Pseudactinotalea suaedae (Zhao et al. 2015) Cho et al. 2017

genus: Pseudactinotalea

species: Pseudactinotalea suaedae

synonym: Actinotalea suaedae


description: domain/bacteria

full scientific name: <I>Leucobacter</I> Takeuchi et al. 1996

genus: Leucobacter

species: Leucobacter sp.

full scientific name: Leucobacter sp.

description: Leucobacter sp. PH1c 16S ribosomal RNA gene, partial sequence

description: ASM63341v1 assembly for Leucobacter sp. PH1c


description: domain/bacteria

family: Propionibacteriaceae

full scientific name: <I>Tessaracoccus</I> Maszenan et al. 1999

genus: Tessaracoccus

order: Propionibacteriales

species: Tessaracoccus sp.

full scientific name: Tessaracoccus sp.


description: domain/bacteria

family: Erythrobacteraceae

full scientific name: <I>Croceicoccus</I> Xu et al. 2009

genus: Croceicoccus

species: Croceicoccus sp.

full scientific name: Croceicoccus sp.

phylum: Proteobacteria


culture collection no.: DSM 102308, Marseille-P2431

description: domain/bacteria

family: Rikenellaceae

full scientific name: Alistipes provencensis Bellali et al. 2019

genus: Alistipes

species: Alistipes provencensis

full scientific name: Alistipes sp.

species: Alistipes sp.


class: Coriobacteriia

description: domain/bacteria

family: Eggerthellaceae

full scientific name: Adlercreutzia muris (Lagkouvardos et al. 2016) Nouioui et al. 2018

genus: Adlercreutzia

order: Eggerthellales

species: Adlercreutzia muris

synonym: Enterorhabdus muris

description: Adlercreutzia muris strain DSM 110078 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria


description: domain/bacteria

full scientific name: <I>Agromyces</I> Gledhill and Casida 1969 (Approved Lists 1980)

genus: Agromyces

species: Agromyces sp.

full scientific name: Agromyces sp.


description: domain/bacteria

description: Agromyces sp. strain CFH S01066 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Agromyces sp. strain CFH S01110 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

full scientific name: <I>Rathayibacter</I> Zgurskaya et al. 1993

genus: Rathayibacter

species: Rathayibacter sp.

full scientific name: Rathayibacter sp.


description: domain/bacteria

family: Intrasporangiaceae

full scientific name: <I>Phycicoccus</I> Lee 2006

genus: Phycicoccus

species: Phycicoccus sp.

full scientific name: Phycicoccus sp.


description: domain/bacteria

family: Nakamurellaceae

full scientific name: <I>Nakamurella</I> Tao et al. 2004

genus: Nakamurella

order: Nakamurellales

species: Nakamurella sp.

synonym: Saxeibacter

synonym: Humicoccus

synonym: Microsphaera

full scientific name: Nakamurella sp.

description: Nakamurella sp. strain YIM 130705 16S ribosomal RNA gene, partial sequence.


class: Erysipelotrichia

description: domain/bacteria

family: Erysipelotrichaceae

genus: Faecalibaculum

order: Erysipelotrichales

phylum: Bacillota

species: Faecalibaculum rodentium

full scientific name: Faecalibaculum rodentium Chang et al. 2016 emend. Cox et al. 2017

description: Faecalibaculum rodentium strain DSM 110083 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

full scientific name: Microbacterium commune Pallen 2024

genus: Microbacterium

species: Microbacterium commune

synonym: Microbacterium commune

full scientific name: Microbacterium gallinarum

species: Microbacterium gallinarum


description: domain/bacteria

family: Moraxellaceae

full scientific name: Acinetobacter lactucae Rooney et al. 2016

genus: Acinetobacter

order: Pseudomonadales

species: Acinetobacter lactucae

synonym: Acinetobacter dijkshoorniae


description: domain/bacteria

full scientific name: <I>Sediminibacter</I> Khan et al. 2007

genus: Sediminibacter

species: Sediminibacter sp.

full scientific name: Sediminibacter sp.

description: ASM68833v1 assembly for Sediminibacter sp. Hel_I_10


class: Spirochaetia

description: domain/bacteria

family: Sphaerochaetaceae

full scientific name: <I>Sphaerochaeta</I> Ritalahti et al. 2012

genus: Sphaerochaeta

order: Spirochaetales

species: Sphaerochaeta sp.

synonym: Parasphaerochaeta

full scientific name: Sphaerochaeta sp.

strain designation: PS

description: Sphaerochaeta sp. DSM 26296 partial 16S rRNA gene, strain DSM 26296, PS, isolate PS


description: domain/bacteria

full scientific name: Puzihella rosea Sheu et al. 2017

genus: Puzihella

species: Puzihella rosea

description: Actinobacterium MWH-Ta3 partial 16S rRNA gene


family: Lachnospiraceae

full scientific name: Lachnospiraceae bacterium

genus: Lachnospiraceae

order: Not assigned to order

phylum: Firmicutes

species: Lachnospiraceae bacterium


description: domain/bacteria

full scientific name: Otoolea muris Afrizal et al. 2023

genus: Otoolea

species: Otoolea muris

full scientific name: Otoolea muris

strain designation: CLA-AA-M04, SCD101-BHI5-F9

description: Lachnospiraceae_gen_nov1_DSM111138 assembly for Otoolea muris DSM 111138


description: domain/bacteria

family: Sphingomonadaceae

full scientific name: Sphingomonas olei Chaudhary and Kim 2017

genus: Sphingomonas

species: Sphingomonas olei

description: ASM480165v1 assembly for Sphingomonas olei NM83_B4-11


description: domain/bacteria

full scientific name: <I>Polaribacter</I> Gosink et al. 1998

genus: Polaribacter

species: Polaribacter sp.

full scientific name: Polaribacter sp.

description: ASM68793v1 assembly for Polaribacter sp. Hel_I_88


description: domain/bacteria

description: ASM76680v1 assembly for Polaribacter sp. Hel1_33_49


description: domain/bacteria

description: ASM76679v1 assembly for Polaribacter sp. Hel1_85


description: domain/bacteria

description: ASM1927848v1 assembly for Polaribacter sp. R2A056_3_33


description: domain/bacteria

description: ASM1927852v1 assembly for Polaribacter sp. HaHaR_3_91


description: domain/bacteria

strain designation: AHE53.11, AHE13PA

description: ASM1927850v1 assembly for Polaribacter sp. AHE13PA


description: domain/bacteria

family: Caryophanaceae

full scientific name: <I>Planococcus</I> Migula 1894 (Approved Lists 1980)

genus: Planococcus

species: Planococcus sp.

synonym: Planomicrobium

full scientific name: Planococcus sp.

description: ASM970766v1 assembly for Planomicrobium sp. YIM 101495


description: domain/bacteria


description: domain/bacteria

family: Roseobacteraceae

full scientific name: <I>Hasllibacter</I> Kim et al. 2012

genus: Hasllibacter

order: Rhodobacterales

species: Hasllibacter sp.

family: Rhodobacteraceae

full scientific name: Hasllibacter sp.


description: domain/bacteria

family: Kineosporiaceae

full scientific name: <I>Quadrisphaera</I> Maszenan et al. 2005

genus: Quadrisphaera

order: Kineosporiales

species: Quadrisphaera sp.

full scientific name: Quadrisphaera sp.


description: domain/bacteria

full scientific name: <I>Palleronia</I> Martínez-Checa et al. 2005

genus: Palleronia

species: Palleronia sp.

synonym: Paenimaribius

synonym: Hwanghaeicola

synonym: Maribius

full scientific name: Palleronia sp.


description: domain/bacteria

full scientific name: <I>Leisingera</I> Schaefer et al. 2002

genus: Leisingera

species: Leisingera sp.

full scientific name: Leisingera sp.


description: domain/bacteria

full scientific name: <I>Thalassobius</I> Arahal et al. 2005

genus: Thalassobius

species: Thalassobius sp.

full scientific name: Thalassobius sp.


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: <I>Winogradskyella</I> Nedashkovskaya et al. 2005

genus: Winogradskyella

species: Winogradskyella sp.

full scientific name: Winogradskyella sp.

description: ASM1927842v1 assembly for Winogradskyella sp. HaHa_3_26


description: domain/bacteria

family: Streptosporangiaceae

full scientific name: <I>Thermopolyspora</I> (ex Krassilnikov and Agre 1964) Goodfellow et al. 2005

genus: Thermopolyspora

order: Streptosporangiales

species: Thermopolyspora sp.

full scientific name: Thermopolyspora sp.

description: Thermopolyspora sp. Gyg-3 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Streptococcaceae

full scientific name: Lactococcus petauri Goodman et al. 2017

genus: Lactococcus

order: Lactobacillales

species: Lactococcus petauri

description: Lactococcus petauri strain DSM 109777 16S ribosomal RNA gene, partial sequence.


culture collection no.: DSM 101080, Marseille-P2133

description: domain/bacteria

family: Eubacteriales, not assigned to family

full scientific name: Fenollaria timonensis Lo et al. 2023

genus: Fenollaria

species: Fenollaria timonensis

synonym: Fenollaria timonensis


description: domain/bacteria

full scientific name: <I>Christiangramia</I> Deshmukh and Oren 2023

genus: Christiangramia

species: Christiangramia sp.

synonym: Gramella

full scientific name: Gramella sp.

genus: Gramella

species: Gramella sp.

description: ASM671489v1 assembly for Gramella sp. Hel_I_59


description: domain/bacteria

family: Micromonosporaceae

full scientific name: <I>Micromonospora</I> Ørskov 1923 (Approved Lists 1980)

genus: Micromonospora

order: Micromonosporales

species: Micromonospora sp.

synonym: Jishengella

synonym: Xiangella

synonym: Verrucosispora

full scientific name: Verrucosispora sp.

genus: Verrucosispora

species: Verrucosispora sp.


description: domain/bacteria

family: Aerococcaceae

full scientific name: Fundicoccus ignavus Siebert et al. 2020

genus: Fundicoccus

species: Fundicoccus ignavus


description: domain/bacteria

family: Comamonadaceae

full scientific name: <I>Limnohabitans</I> Hahn et al. 2010

genus: Limnohabitans

order: Burkholderiales

species: Limnohabitans sp.

full scientific name: Limnohabitans sp. Kasalický et al. 2013

description: ASM277831v1 assembly for Limnohabitans sp. JirII-31


description: domain/bacteria

description: ASM29386v2 assembly for Limnohabitans sp. Rim28


description: domain/bacteria

description: ASM277827v1 assembly for Limnohabitans sp. G3-2


description: domain/bacteria


description: domain/bacteria

description: ASM277828v1 assembly for Limnohabitans sp. 15K


description: domain/bacteria

family: Coriobacteriaceae

full scientific name: Collinsella ihumii Ben Khedher et al. 2022

genus: Collinsella

order: Coriobacteriales

species: Collinsella ihumii

synonym: Collinsella ihuae

full scientific name: Collinsella ihumii Khedher et al. 2022


description: domain/bacteria

full scientific name: <I>Kurthia</I> Trevisan 1885 (Approved Lists 1980)

genus: Kurthia

order: Caryophanales

species: Kurthia sp.

full scientific name: Kurthia sp.


culture collection no.: DSM 103121, Marseille-P2698

description: domain/bacteria

family: Porphyromonadaceae

full scientific name: Culturomica massiliensis Ndongo et al. 2016

genus: Culturomica

order: Bacteroidales

species: Culturomica massiliensis

description: Odoribacter sp. Marseille-P2698 partial 16S rRNA gene, strain Marseille-P2698

description: PRJEB14541 assembly for Culturomica massiliensis Marseille-P2698


description: domain/bacteria

family: Caulobacteraceae

full scientific name: Brevundimonas guildfordensis Pallen 2024

genus: Brevundimonas

order: Caulobacterales

species: Brevundimonas guildfordensis

synonym: Brevundimonas guildfordensis

full scientific name: Brevundimonas guildfordensis

description: ASM1483640v1 assembly for Brevundimonas guildfordensis Sa3CVA3


class: Desulfovibrionia

description: domain/bacteria

family: Desulfovibrionaceae

full scientific name: Fundidesulfovibrio magnetotacticus Shimoshige et al. 2022

genus: Fundidesulfovibrio

order: Desulfovibrionales

phylum: Thermodesulfobacteriota

species: Fundidesulfovibrio magnetotacticus

class: Deltaproteobacteria

full scientific name: Fundidesulfovibrio magnetotacticus

description: Desulfovibrio sp. gene for 16S rRNA, partial sequence, strain: FSS-1

description: ASM1301910v1 assembly for Fundidesulfovibrio magnetotacticus FSS-1


class: Actinomycetes

description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium ostraviense Jagielski et al. 2019

genus: Mycobacterium

order: Mycobacteriales

species: Mycobacterium ostraviense

class: Actinobacteria

description: ASM270592v1 assembly for Mycobacterium ostraviense 241/15


description: domain/bacteria

family: Eggerthellaceae

full scientific name: Adlercreutzia agrestimuris Afrizal et al. 2023

genus: Adlercreutzia

order: Eggerthellales

species: Adlercreutzia agrestimuris

full scientific name: Adlercreutzia agrestimuris

strain designation: CLA-SR-6, SR6

description: Adlercreutzia_sp_nov2_DSM109821 assembly for Adlercreutzia agrestimuris DSM 109821


description: domain/bacteria

family: Mycoplasmataceae

full scientific name: Mycoplasma marinum Ramírez et al. 2020

genus: Mycoplasma

order: Mycoplasmatales

species: Mycoplasma marinum

strain designation: PE

description: Mycoplasma sp. PE partial 16S rRNA gene, strain PE

description: ASM433597v1 assembly for Mycoplasma marinum PE


description: domain/bacteria

family: Pirellulaceae

full scientific name: Rosistilla oblonga Waqqas et al. 2021

genus: Rosistilla

order: Pirellulales

species: Rosistilla oblonga

full scientific name: Rosistilla oblonga Waqqas et al. 2020

strain designation: Mal33, Malle 33

description: ASM775275v1 assembly for Rosistilla oblonga Mal33


description: domain/bacteria

family: Oscillospiraceae

full scientific name: Bittarella massiliensis Durand et al. 2017

genus: Bittarella

order: Eubacteriales

species: Bittarella massiliensis

description: Bittarella massiliensis assembly for Bittarella massiliensis (ex Durand et al. 2017) GD6


description: domain/bacteria

full scientific name: Gorbachella massiliensis Durand et al. 2017

genus: Gorbachella

species: Gorbachella massiliensis


description: domain/bacteria

family: Bacillaceae

full scientific name: <I>Alteribacillus</I> Didari et al. 2012

genus: Alteribacillus

species: Alteribacillus sp.

full scientific name: Alteribacillus sp.


description: domain/bacteria


description: domain/bacteria

full scientific name: Anoxybacillus karvacharensis Panosyan et al. 2021

genus: Anoxybacillus

species: Anoxybacillus karvacharensis

description: ASM199628v1 assembly for Anoxybacillus kestanbolensis K1


description: domain/bacteria

full scientific name: <I>Priestia</I> Gupta et al. 2020

genus: Priestia

species: Priestia sp.

full scientific name: Priestia sp.


description: domain/bacteria

full scientific name: <I>Polygonibacillus</I> Hirota et al. 2016

genus: Polygonibacillus

species: Polygonibacillus sp.

full scientific name: Polygonibacillus sp.


description: domain/bacteria

full scientific name: <I>Thalassorhabdus</I> Sultanpuram and Mothe 2018

genus: Thalassorhabdus

species: Thalassorhabdus sp.

full scientific name: Thalassorhabdus sp.


description: domain/bacteria

full scientific name: <I>Alkalihalobacillus</I> Patel and Gupta 2020

genus: Alkalihalobacillus

species: Alkalihalobacillus sp.

full scientific name: Alkalihalobacillus sp.


description: domain/bacteria

full scientific name: <I>Pradoshia</I> Saha et al. 2019

genus: Pradoshia

species: Pradoshia sp.

full scientific name: Pradoshia sp.


class: Bacteroidia

description: domain/bacteria

family: Bacteroidaceae

full scientific name: Phocaeicola faecicola Choi et al. 2021

genus: Phocaeicola

species: Phocaeicola faecicola


description: domain/bacteria

family: Acetobacteraceae

full scientific name: <I>Roseococcus</I> Yurkov et al. 1994

genus: Roseococcus

order: Rhodospirillales

species: Roseococcus sp.

full scientific name: Roseococcus sp.

description: ASM433674v1 assembly for Roseococcus sp. SYP-B2431


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas crudilactis Schlusselhuber et al. 2022

genus: Pseudomonas

order: Pseudomonadales

species: Pseudomonas crudilactis

full scientific name: Pseudomonas crudilactis Schlusselhuber et al. 2021

description: ASM1343331v1 assembly for Pseudomonas crudilactis UCMA 17988


description: domain/bacteria

full scientific name: Mycobacterium mengxiangliae corrig. (Cheng et al. 2021) Göker et al. 2025

species: Mycobacterium mengxiangliae

synonym: Mycolicibacterium mengxianglii

synonym: Mycolicibacterium mengxiangliae

full scientific name: Mycolicibacterium mengxianglii Cheng et al., 2021

genus: Mycolicibacterium

species: Mycolicibacterium mengxianglii

description: ASM1571057v2 assembly for Mycolicibacterium mengxianglii Z-34


description: domain/bacteria

family: Nocardiaceae

full scientific name: Nocardia albiluteola Shan et al. 2022

genus: Nocardia

species: Nocardia albiluteola

description: ASM1886015v1 assembly for Nocardia albiluteola NEAU-G5


description: domain/bacteria

family: Bartonellaceae

full scientific name: Mesorhizobium onobrychidis Ashrafi et al. 2023

genus: Mesorhizobium

order: Hyphomicrobiales

species: Mesorhizobium onobrychidis

family: Phyllobacteriaceae

full scientific name: Mesorhizobium onobrychidis Ashrafi et al., 2022

description: Mesorhizobium sp. OM4 16S ribosomal RNA gene, partial sequence.

description: ASM2470754v1 assembly for Mesorhizobium onobrychidis OM4


description: domain/bacteria

family: Erythrobacteraceae

full scientific name: Qipengyuania pacifica Tareen et al. 2022

genus: Qipengyuania

order: Sphingomonadales

species: Qipengyuania pacifica

synonym: Qipengyuania aerophila

full scientific name: Qipengyuania pacifica Tareen et al.

description: ASM1985720v1 assembly for Qipengyuania pacifica NZ-96


description: domain/bacteria

family: Weeksellaceae

full scientific name: Chryseobacterium capnotolerans Heidler von Heilborn et al. 2022

genus: Chryseobacterium

order: Flavobacteriales

species: Chryseobacterium capnotolerans

full scientific name: Chryseobacterium capnotolerans Heidler von Heilbron et al.

description: ASM2127896v1 assembly for Chryseobacterium capnotolerans


description: domain/bacteria

family: Alcaligenaceae

full scientific name: Paenalcaligenes niemegkensis Mitzscherling et al. 2022

genus: Paenalcaligenes

species: Paenalcaligenes niemegkensis

description: ASM2223088v1 assembly for Paenalcaligenes niemegkensis NGK35


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: <I>Candidatus</I> Arcticimaribacter forsetii Priest et al. 2022

genus: Arcticimaribacter

species: Arcticimaribacter forsetii

family: Bacteroidia, not assigned to family

order: Not assigned to order


description: domain/bacteria

family: Morganellaceae

full scientific name: Arsenophonus apicola Nadal-Jiménez et al. 2022

genus: Arsenophonus

order: Enterobacterales

species: Arsenophonus apicola

full scientific name: Arsenophonus apicola

strain designation: ArsBeeUS

description: ASM2026860v1 assembly for Arsenophonus apicola ArsBeeUS


class: Deferribacteres

description: domain/bacteria

family: Geovibrionaceae

full scientific name: Limisalsivibrio acetivorans Spring et al. 2022

genus: Limisalsivibrio

order: Deferribacterales

phylum: Deferribacterota

species: Limisalsivibrio acetivorans

full scientific name: Limisalsivibrio acetivorans

description: Bacterium L21-Ace-BES 16S ribosomal RNA gene, partial sequence

description: ASM42110v1 assembly for Limisalsivibrio acetivorans L21-Ace-BES


description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: Bifidobacterium phasiani Lugli et al. 2022

genus: Bifidobacterium

order: Bifidobacteriales

species: Bifidobacterium phasiani

description: ASM1933177v1 assembly for Bifidobacterium phasiani 6T3


description: domain/bacteria

family: Rhizobiaceae

full scientific name: Agrobacterium burrii Mafakheri et al. 2022

genus: Agrobacterium

species: Agrobacterium burrii

full scientific name: Agrobacterium burrii Mafakheri et al., 2022

strain designation: Rnr


description: domain/bacteria

full scientific name: Agrobacterium shirazense Mafakheri et al. 2022

species: Agrobacterium shirazense

full scientific name: Agrobacterium shirazense Mafakheri et al., 2022


description: domain/bacteria

full scientific name: Onobrychidicola muellerharveyae Ashrafi et al. 2023

genus: Onobrychidicola

species: Onobrychidicola muellerharveyae

full scientific name: Onobrychidicola muellerharveyae Ashrafi et al., 2022

description: Rhizobiaceae bacterium TH2 16S ribosomal RNA gene, partial sequence.


class: Flavobacteriia

description: domain/bacteria

full scientific name: <I>Nonlabens</I> Lau et al. 2005

genus: Nonlabens

species: Nonlabens sp.

synonym: Persicivirga

synonym: Stenothermobacter

synonym: Sandarakinotalea

synonym: Donghaeana

full scientific name: Nonlabens sp.


description: domain/bacteria

full scientific name: <I>Zobellia</I> Barbeyron et al. 2001

genus: Zobellia

species: Zobellia sp.

full scientific name: Zobellia sp.


description: domain/bacteria

full scientific name: <I>Psychroserpens</I> Bowman et al. 1997

genus: Psychroserpens

species: Psychroserpens sp.

synonym: Flavihalobacter

synonym: Ichthyenterobacterium

synonym: Arcticiflavibacter

full scientific name: Psychroserpens sp.

description: ASM79946v1 assembly for Psychroserpens sp. Hel_I_66


description: domain/bacteria

family: Comamonadaceae

full scientific name: Serpentinimonas raichei Bird et al. 2021

genus: Serpentinimonas

order: Burkholderiales

species: Serpentinimonas raichei

description: ASM82889v1 assembly for Serpentinimonas raichei A1


description: domain/bacteria

full scientific name: <I>Dokdonia</I> Yoon et al. 2005

genus: Dokdonia

species: Dokdonia sp.

synonym: Krokinobacter

full scientific name: Krokinobacter sp.

genus: Krokinobacter

species: Krokinobacter sp.

description: ASM782746v1 assembly for Dokdonia sp. Hel_I_53


description: domain/bacteria

strain designation: Hel_I-5, Hel1-5


description: domain/bacteria

full scientific name: Serpentinimonas barnesii Bird et al. 2021

species: Serpentinimonas barnesii

description: ASM69622v1 assembly for Serpentinimonas barnesii H1


description: domain/bacteria

full scientific name: Serpentinimonas maccroryi Bird et al. 2021

species: Serpentinimonas maccroryi

description: ASM82891v1 assembly for Serpentinimonas maccroryi B1


class: Alphaproteobacteria

description: domain/bacteria

family: Maricaulaceae

full scientific name: Photocaulis sulfatitolerans Kuzyk et al. 2023

genus: Photocaulis

order: Caulobacterales

species: Photocaulis sulfatitolerans


description: domain/bacteria

full scientific name: Photocaulis rubescens Kuzyk et al. 2023

species: Photocaulis rubescens

full scientific name: Photocaulis rubescens Kuzyk et al.


description: domain/bacteria

family: Erysipelotrichaceae

full scientific name: Erysipelothrix anatis Eisenberg et al. 2022

genus: Erysipelothrix

order: Erysipelotrichales

species: Erysipelothrix anatis

description: ASM982874v1 assembly for Erysipelothrix anatis D17_0559-3-2-1


description: domain/bacteria

full scientific name: Erysipelothrix aquatica Eisenberg et al. 2022

species: Erysipelothrix aquatica

description: ASM982877v2 assembly for Erysipelothrix aquatica VA92-K48


description: domain/bacteria

full scientific name: Erysipelothrix urinaevulpis Eisenberg et al. 2022

species: Erysipelothrix urinaevulpis

description: ASM982883v1 assembly for Erysipelothrix urinaevulpis 165301687


description: domain/bacteria

family: Desulfovibrionaceae

full scientific name: Pseudodesulfovibrio sediminis Takahashi et al. 2022

genus: Pseudodesulfovibrio

order: Desulfovibrionales

species: Pseudodesulfovibrio sediminis

full scientific name: Pseudodesulfovibrio sediminis

description: ASM2088669v1 assembly for Pseudodesulfovibrio sediminis SF6


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Acetatifactor aquisgranensis Afrizal et al. 2024

genus: Acetatifactor

species: Acetatifactor aquisgranensis

full scientific name: Acetatifactor aquisgranensis

strain designation: CLA-AA-M01, SCP101-BHI2-D7

description: Acetatifactor_sp_nov_DSM110981 assembly for Acetatifactor aquisgranensis DSM 110981


description: domain/bacteria

family: Eggerthellaceae

full scientific name: Adlercreutzia aquisgranensis Afrizal et al. 2024

genus: Adlercreutzia

order: Eggerthellales

species: Adlercreutzia aquisgranensis

full scientific name: Adlercreutzia aquisgranensis

strain designation: Cla-RA-2, CLA-SR-PSM1-47, RA2

description: Adlercreutzia_sp_nov3_DSM108611 assembly for Adlercreutzia aquisgranensis


description: domain/bacteria

full scientific name: Adlercreutzia murintestinalis Afrizal et al. 2025

species: Adlercreutzia murintestinalis

full scientific name: Adlercreutzia murintestinalis

strain designation: SPF44-BHI-1, CLA-AA-M17

description: Adlercreutzia_sp_nov1_DSM112345 assembly for Adlercreutzia murintestinalis


description: domain/bacteria

family: Bacteroidaceae

full scientific name: Bacteroides muris Fokt et al. 2023

genus: Bacteroides

order: Bacteroidales

species: Bacteroides muris

synonym: Bacteroides muris

full scientific name: Bacteroides muris


description: domain/bacteria

family: Atopobiaceae

full scientific name: Caniella muris Afrizal et al. 2023

genus: Caniella

order: Coriobacteriales

species: Caniella muris

full scientific name: Caniella muris

description: Atopobiaceae_gen_nov2_DSM105314 assembly for Caniella muris DSM 105314


description: domain/bacteria

description: Atopobiaceae_gen_nov2_DSM110323 assembly for Caniella muris DSM 110323


description: domain/bacteria

description: Atopobiaceae_gen_nov2_DSM110983 assembly for Caniella muris DSM 110983


description: domain/bacteria

full scientific name: Dubosiella muris Afrizal et al. 2023

genus: Dubosiella

species: Dubosiella muris

full scientific name: Dubosiella muris


description: domain/bacteria

family: Oscillospiraceae

full scientific name: Flintibacter muris Afrizal et al. 2024

genus: Flintibacter

order: Eubacteriales

species: Flintibacter muris

class: Gammaproteobacteria

family: Gammaproteobacteria, not assigned to family

full scientific name: Flintibacter muris

order: Gammaproteobacteria, not assigned to order

description: Flintibacter_sp_nov_DSM110149 assembly for Flintibacter muris DSM 110149


class: Bacilli

description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lactobacillus agrestimuris Afrizal et al. 2023

genus: Lactobacillus

order: Lactobacillales

species: Lactobacillus agrestimuris

full scientific name: Lactobacillus agrestimuris

description: Lactobacillus_sp_nov_DSM110155 assembly for Lactobacillus agrestimuris DSM 110155


description: domain/bacteria

family: Streptococcaceae

full scientific name: Lactococcus ileimucosae Afrizal et al. 2023

genus: Lactococcus

species: Lactococcus ileimucosae

full scientific name: Lactococcus ileimucosae

description: Lactococcus_sp_nov2_DSM107391 assembly for Lactococcus ileimucosae DSM 107391


description: domain/bacteria

full scientific name: Lactococcus muris Afrizal et al. 2023

species: Lactococcus muris

synonym: Lactococcus intestinalis

full scientific name: Lactococcus muris

description: Lactococcus_sp_nov1_DSM109779 assembly for Lactococcus muris DSM 109779


description: domain/bacteria

family: Muribaculaceae

full scientific name: Muribaculum caecicola Afrizal et al. 2024

genus: Muribaculum

species: Muribaculum caecicola

full scientific name: Muribaculum caecicola

description: ASM480163v1 assembly for Muribaculum caecicola NM86_A22


description: domain/bacteria

family: Cytobacillaceae

full scientific name: Neobacillus muris Afrizal et al. 2023

genus: Neobacillus

order: Caryophanales

species: Neobacillus muris

family: Bacillaceae

full scientific name: Neobacillus muris

description: Neobacillus_sp_nov_DSM110989 assembly for Neobacillus muris DSM 110989


description: domain/bacteria

full scientific name: Weizmannia agrestimuris Afrizal et al. 2024

genus: Weizmannia

species: Weizmannia agrestimuris

full scientific name: Weizmannia agrestimuris

strain designation: S74, aMCA-6-a-A

description: Weizmannia_sp_nov_DSM106041 assembly for Weizmannia agrestimuris DSM 106041


class: Negativicutes

description: domain/bacteria

family: Veillonellaceae

full scientific name: Veillonella intestinalis Afrizal et al. 2023

genus: Veillonella

order: Veillonellales

species: Veillonella intestinalis

full scientific name: Veillonella intestinalis

strain designation: S17, Trib-3-CC-2C

description: Veillonella_sp_nov1_DSM105313 assembly for Veillonella intestinalis DSM 105313


description: domain/bacteria

description: Veillonella_sp_nov1_DSM110113 assembly for Veillonella intestinalis DSM 110113


description: domain/bacteria

full scientific name: Veillonella agrestimuris Afrizal et al. 2023

species: Veillonella agrestimuris

full scientific name: Veillonella agrestimuris

description: Veillonella_sp_nov2_DSM110088 assembly for Veillonella agrestimuris DSM 110888


description: domain/bacteria

full scientific name: Streptococcus caecimuris Afrizal et al. 2024

genus: Streptococcus

species: Streptococcus caecimuris

full scientific name: Streptococcus caecimuris

description: Streptococcus_sp_nov_DSM110150 assembly for Streptococcus caecimuris DSM 110150


description: domain/bacteria

family: Eubacteriaceae

full scientific name: Senimuribacter intestinalis Afrizal et al. 2025

genus: Senimuribacter

species: Senimuribacter intestinalis

full scientific name: Senimuribacter intestinalis

description: Eubacteriaceae_gen_nov1_DSM106208 assembly for Senimuribacter intestinalis DSM 106208


description: domain/bacteria

description: Eubacteriaceae_gen_nov1_DSM109599 assembly for Senimuribacter intestinalis DSM 109599


description: domain/bacteria

full scientific name: Petralouisia muris Afrizal et al. 2025

genus: Petralouisia

species: Petralouisia muris

full scientific name: Petralouisia muris


description: domain/bacteria

family: Prevotellaceae

full scientific name: Palleniella muris Afrizal et al. 2024

genus: Palleniella

species: Palleniella muris

full scientific name: Palleniella muris

description: ASM479265v1 assembly for Palleniella muris NM73_A23


description: domain/bacteria

full scientific name: Muricaecibacterium torontonense Afrizal et al. 2023

genus: Muricaecibacterium

species: Muricaecibacterium torontonense

full scientific name: Muricaecibacterium torontonense

description: ASM479392v1 assembly for Muricaecibacterium torontonense NM07_P-09


description: domain/bacteria

full scientific name: Lepagella muris Afrizal et al. 2023

genus: Lepagella

species: Lepagella muris

full scientific name: Lepagella muris

description: ASM479397v1 assembly for Lepagella muris NM04_E33


description: domain/bacteria

full scientific name: Hominisplanchenecus murintestinalis Afrizal et al. 2022

genus: Hominisplanchenecus

species: Hominisplanchenecus murintestinalis

full scientific name: Hominisplanchenecus murintestinalis

description: ASM479358v1 assembly for Hominisplanchenecus murintestinalis NM72_1-8


description: domain/bacteria

full scientific name: Vermiculatibacterium agrestimuris Afrizal et al. 2022

genus: Vermiculatibacterium

species: Vermiculatibacterium agrestimuris

full scientific name: Vermiculatibacterium agrestimuris

description: Oscillospiraceae_gen_nov_DSM112226 assembly for Vermiculatibacterium agrestimuris DSM 112226


class: Thermoprotei

description: domain/archaea

family: Sulfolobaceae

full scientific name: Metallosphaera javensis Hofmann et al. 2022

genus: Metallosphaera

keyword: phylum/thermoproteota

order: Sulfolobales

phylum: Thermoproteota

species: Metallosphaera javensis

full scientific name: Metallosphaera javensis

phylum: Crenarchaeota

description: Metallosphaera sp. strain J1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Variimorphobacter saccharofermentans Rettenmaier et al. 2021

genus: Variimorphobacter

species: Variimorphobacter saccharofermentans

full scientific name: Variimorphobacter saccharofermentans

description: Variimorphobacter saccharofermentans strain MD1 16S ribosomal RNA gene, partial sequence

description: ASM1417440v1 assembly for Variimorphobacter saccharofermentans MD1


description: domain/bacteria

family: Anaerovoracaceae

full scientific name: Aminipila terrae Kim et al. 2022

genus: Aminipila

order: Peptostreptococcales

species: Aminipila terrae

full scientific name: Aminipila terrae

description: ASM1012071v1 assembly for Aminipila terrae CBA3637


class: Betaproteobacteria

description: domain/bacteria

family: Gallionellaceae

full scientific name: Sideroxyarcus emersonii Kato et al. 2022

genus: Sideroxyarcus

order: Spirillales

phylum: Pseudomonadota

species: Sideroxyarcus emersonii

full scientific name: Sideroxyarcus emersonii

order: Nitrosomonadales

description: Sideroxyarcus emersonii MIZ01 gene for 16S ribosomal RNA

description: ASM2165433v1 assembly for Sideroxyarcus emersonii MIZ01


class: Thermodesulfovibrionia

description: domain/bacteria

family: Dissulfurispiraceae

full scientific name: Dissulfurispira thermophila Umezawa et al. 2021

genus: Dissulfurispira

keyword: phylum/nitrospirota

order: Thermodesulfovibrionales

phylum: Nitrospirota

species: Dissulfurispira thermophila

description: ASM1470123v1 assembly for Dissulfurispira thermophila T55J


class: Syntrophobacteria

description: domain/bacteria

family: Syntrophobacteraceae

full scientific name: Desulfoferrobacter suflitae Davidova et al. 2022

genus: Desulfoferrobacter

order: Syntrophobacterales

species: Desulfoferrobacter suflitae

full scientific name: Desulfoferrobacter suflitae

description: Desulfoferrobacter suflitae strain DRH4 16S ribosomal RNA gene, partial sequence

description: ASM2260339v1 assembly for Desulfoferrobacter suflitae DRH4


description: domain/bacteria

family: Treponemataceae

full scientific name: Brucepastera parasyntrophica Song et al. 2023

genus: Brucepastera

order: Spirochaetales

phylum: Spirochaetota

species: Brucepastera parasyntrophica

full scientific name: Brucepastera parasyntrophica

description: Brucepastera parasyntrophica strain RmG11 16S ribosomal RNA gene, partial sequence

description: ASM2237683v1 assembly for Brucepastera parasyntrophica RmG11


description: domain/bacteria

family: Promicromonosporaceae

full scientific name: Oerskovia douganii Pallen 2024

genus: Oerskovia

order: Micrococcales

species: Oerskovia douganii

synonym: Oerskovia douganii

full scientific name: Oerskovia douganii

description: ASM1514273v1 assembly for Oerskovia douganii Sa1BUA8


description: domain/bacteria

full scientific name: Oerskovia gallyi Pallen 2024

species: Oerskovia gallyi

synonym: Oerskovia gallyi

full scientific name: Oerskovia gallyi

description: ASM1483674v1 assembly for Oerskovia gallyi Sa2CUA8


description: domain/bacteria

full scientific name: Oerskovia merdavium Pallen 2024

species: Oerskovia merdavium

synonym: Oerskovia merdavium

full scientific name: Oerskovia merdavium

description: ASM1483675v1 assembly for Oerskovia merdavium Sa2CUA9


description: domain/bacteria

full scientific name: Oerskovia rustica Pallen 2024

species: Oerskovia rustica

synonym: Oerskovia rustica

full scientific name: Oerskovia rustica

description: ASM1483655v1 assembly for Oerskovia rustica Sa4CUA1


description: domain/bacteria

family: Caryophanaceae

full scientific name: Planococcus wigleyi Pallen 2024

genus: Planococcus

species: Planococcus wigleyi

synonym: Planococcus wigleyi

full scientific name: Planococcus wigleyi

description: ASM1483698v1 assembly for Planococcus wigleyi Sa1BUA13


description: domain/bacteria

family: Moraxellaceae

full scientific name: Psychrobacter communis Pallen 2024

genus: Psychrobacter

order: Pseudomonadales

species: Psychrobacter communis

synonym: Psychrobacter communis

full scientific name: Psychrobacter communis

description: ASM1483650v1 assembly for Psychrobacter communis Sa4CVA2


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Serpens gallinarum Pallen 2024

genus: Serpens

species: Serpens gallinarum

synonym: Serpens gallinarum

full scientific name: Serpens gallinarum

description: ASM1483676v1 assembly for Serpens gallinarum Sa2CUA2


description: domain/bacteria

full scientific name: Sporosarcina gallistercoris Pallen 2024

genus: Sporosarcina

species: Sporosarcina gallistercoris

synonym: Sporosarcina gallistercoris

full scientific name: Sporosarcina gallistercoris

description: ASM1483641v1 assembly for Sporosarcina gallistercoris Sa3CUA8


description: domain/bacteria

full scientific name: Ureibacillus galli Pallen 2024

genus: Ureibacillus

species: Ureibacillus galli

synonym: Ureibacillus galli

full scientific name: Ureibacillus galli

description: ASM1483684v1 assembly for Ureibacillus galli Re31


description: domain/bacteria

full scientific name: Sporosarcina quadrami Pallen 2024

species: Sporosarcina quadrami

synonym: Sporosarcina quadrami

full scientific name: Sporosarcina quadrami

description: ASM1483661v1 assembly for Sporosarcina quadrami Sa2YVA2


description: domain/bacteria

family: Weeksellaceae

full scientific name: Kaistella pullorum Pallen 2024

genus: Kaistella

order: Flavobacteriales

species: Kaistella pullorum

synonym: Kaistella pullorum


class: Fusobacteriia

description: domain/bacteria

family: Fusobacteriaceae

full scientific name: Fusobacterium hominis Liu et al. 2022

genus: Fusobacterium

keyword: phylum/fusobacteriota

order: Fusobacteriales

phylum: Fusobacteriota

species: Fusobacterium hominis

strain designation: NSJ 57


description: domain/bacteria

family: Actinomycetaceae

full scientific name: Actinomyces capricornis Saito et al. 2022

genus: Actinomyces

keyword: phylum/actinomycetota

order: Actinomycetales

phylum: Actinomycetota

species: Actinomyces capricornis

description: ASM1997413v1 assembly for Actinomyces capricornis MAS-1


description: domain/bacteria

full scientific name: Arcanobacterium buesumense Alssahen et al. 2022

genus: Arcanobacterium

species: Arcanobacterium buesumense

description: Arcanobacterium sp. 2701 16S ribosomal RNA gene, partial sequence

description: ASM1256354v1 assembly for Arcanobacterium buesumense 2701


description: domain/bacteria

family: Kineosporiaceae

full scientific name: Quadrisphaera setariae Kim et al. 2022

genus: Quadrisphaera

order: Kineosporiales

species: Quadrisphaera setariae

description: Quadrisphaera setariae strain DD2A 16S ribosomal RNA gene, partial sequence

description: ASM804193v1 assembly for Quadrisphaera setariae DD2A


description: domain/bacteria

family: Glycomycetaceae

full scientific name: Glycomyces salinus Li et al. 2022

genus: Glycomyces

order: Glycomycetales

species: Glycomyces salinus


description: domain/bacteria

family: Ruaniaceae

full scientific name: Occultella gossypii Ge et al. 2022

genus: Occultella

species: Occultella gossypii

description: Occultella gossypii 16S ribosomal RNA gene, partial sequence

description: ASM1994713v1 assembly for Occultella gossypii N2-46


description: domain/bacteria

full scientific name: Ruania halotolerans Xu et al. 2022

genus: Ruania

species: Ruania halotolerans

description: Ruania halotolerans strain M4N3S171 16S ribosomal RNA gene, partial sequence

description: ASM2104928v1 assembly for Ruania halotolerans M4N3S171


description: domain/bacteria

full scientific name: Ruania suaedae Xu et al. 2022

species: Ruania suaedae

description: Ruania suaedae strain LR1S40 16S ribosomal RNA gene, partial sequence

description: ASM2104926v1 assembly for Ruania suaedae LR1S40


description: domain/bacteria

family: Cellulomonadaceae

full scientific name: Cellulomonas algicola Yamamura et al. 2019

genus: Cellulomonas

species: Cellulomonas algicola

synonym: Cellulomonas aurantiaca

full scientific name: Cellulomonas aurantiaca Kim et al. 2020

species: Cellulomonas aurantiaca

strain designation: THG SMD2.3

description: Cellulomonas algicola 16S ribosomal RNA gene, partial sequence

description: ASM4265416v1 assembly for Cellulomonas algicola CGMCC 1.16303

description: ASM1902430v1 assembly for Cellulomonas algicola THG-SMD2.3


description: domain/bacteria

full scientific name: Cellulomonas palmilytica corrig. Siriatcharanon et al. 2022

species: Cellulomonas palmilytica

synonym: Cellulomonas palmilyticum

full scientific name: Cellulomonas palmilytica Siriatcharanon et al. 2022

description: Cellulomonas palmilytica 16S ribosomal RNA gene, partial sequence

description: ASM2159004v1 assembly for Cellulomonas palmilytica EW123


description: domain/bacteria

full scientific name: Cellulomonas dongxiuzhuiae Zhang et al. 2022

species: Cellulomonas dongxiuzhuiae

description: Cellulomonas dongxiuzhuiae strain zg-ZUI157 16S ribosomal RNA gene, partial sequence

description: ASM1758198v1 assembly for Cellulomonas dongxiuzhuiae zg-ZUI157

description: ASM1862303v1 assembly for Cellulomonas dongxiuzhuiae zg-ZUI157


description: domain/bacteria

full scientific name: Cellulomonas fengjieae Zhang et al. 2022

species: Cellulomonas fengjieae

description: Cellulomonas fengjieae strain zg-ZUI188 16S ribosomal RNA gene, partial sequence

description: ASM1758203v1 assembly for Cellulomonas fengjieae zg-ZUI188

description: ASM1838846v1 assembly for Cellulomonas fengjieae zg-ZUI188


description: domain/bacteria

full scientific name: Cellulomonas wangleii Zhang et al. 2022

species: Cellulomonas wangleii

description: Cellulomonas wangleii strain zg-ZUI222 16S ribosomal RNA gene, partial sequence

description: ASM1735355v1 assembly for Cellulomonas wangleii zg-ZUI222

description: ASM1838844v1 assembly for Cellulomonas wangleii zg-ZUI222


description: domain/bacteria

family: Micrococcaceae

full scientific name: Arthrobacter cavernae Fang et al. 2022

genus: Arthrobacter

species: Arthrobacter cavernae

description: Arthrobacter cavernae strain PO-11 16S ribosomal RNA gene, partial sequence

description: ASM1736879v1 assembly for Arthrobacter cavernae PO-11


description: domain/bacteria

family: Dermatophilaceae

full scientific name: Arsenicicoccus cauae Kweon et al. 2022

genus: Arsenicicoccus

species: Arsenicicoccus cauae

description: Arsenicicoccus cauae strain MKL-02 16S ribosomal RNA gene, partial sequence

description: ASM970712v1 assembly for Arsenicicoccus cauae MKL-02


description: domain/bacteria

family: Microbacteriaceae

full scientific name: Schumannella soli Li et al. 2022

genus: Schumannella

species: Schumannella soli

description: Schumannella soli strain 10F1D-1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Agromyces cavernae Fang et al. 2022

genus: Agromyces

species: Agromyces cavernae

description: Agromyces sp. strain SYSU K20354 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Leucobacter chinensis Zhu et al. 2022

genus: Leucobacter

species: Leucobacter chinensis

description: Leucobacter chinensis strain NC76-1 16S ribosomal RNA gene, partial sequence

description: ASM1904910v1 assembly for Leucobacter chinensis NC76-1


description: domain/bacteria

full scientific name: Pseudoclavibacter triregionum Vandamme et al. 2022

genus: Pseudoclavibacter

species: Pseudoclavibacter triregionum


description: domain/bacteria

full scientific name: Humibacter ginsenosidimutans Choi et al. 2022

genus: Humibacter

species: Humibacter ginsenosidimutans

description: Humibacter ginsenosidimutans strain WJ7-1 16S ribosomal RNA gene, partial sequence

description: ASM785967v1 assembly for Humibacter ginsenosidimutans WJ7-1


description: domain/bacteria

family: Thermomonosporaceae

full scientific name: Actinomadura parmotrematis Somphong et al. 2022

genus: Actinomadura

order: Streptosporangiales

species: Actinomadura parmotrematis

description: Actinomadura parmotrematis strain PM05-2 16S ribosomal RNA gene, partial sequence

description: ASM1945880v1 assembly for Actinomadura parmotrematis PM05-2


description: domain/bacteria

full scientific name: Actinomadura spongiicola Qin et al. 2022

species: Actinomadura spongiicola

description: Actinomadura spongiicola strain LHW52907 16S ribosomal RNA gene, partial sequence

description: ASM343248v1 assembly for Actinomadura spongiicola LHW52907


description: domain/bacteria

family: Streptosporangiaceae

full scientific name: Acrocarpospora catenulata Liu et al. 2022

genus: Acrocarpospora

species: Acrocarpospora catenulata

description: Acrocarpospora catenulata strain H8750 16S ribosomal RNA gene, partial sequence

description: ASM1847652v1 assembly for Acrocarpospora catenulata H8750


description: domain/bacteria

full scientific name: Nonomuraea phyllanthi Klykleung et al. 2020

genus: Nonomuraea

species: Nonomuraea phyllanthi

synonym: Nonomuraea nitratireducens

full scientific name: Nonomuraea nitratireducens Ou et al. 2020

species: Nonomuraea nitratireducens

description: Nonomuraea phyllanthi strain WYY166 16S ribosomal RNA gene, partial sequence

description: ASM949707v1 assembly for Nonomuraea phyllanthi WYY166


description: domain/bacteria

full scientific name: Nonomuraea aurantiaca Lin et al. 2022

species: Nonomuraea aurantiaca

strain designation: NEAU L178

description: Nonomuraea aurantiaca strain NEAU-L178 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Microbispora oryzae Muangham and Duangmal 2022

genus: Microbispora

species: Microbispora oryzae

description: Microbispora oryzae strain RL4-1S 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium tuberculosis (Zopf 1883) Lehmann and Neumann 1896 (Approved Lists 1980)

genus: Mycobacterium

order: Mycobacteriales

species: Mycobacterium tuberculosis

synonym: Mycobacterium africanum

synonym: Mycobacterium bovis subsp. caprae

synonym: Bacterium tuberculosis

synonym: Mycobacterium pinnipedii

synonym: Mycobacterium caprae

synonym: Mycobacterium microti

synonym: Mycobacterium tuberculosis subsp. caprae

synonym: Mycobacterium bovis

full scientific name: Mycobacterium bovis Karlson and Lessel 1970 (Approved Lists 1980)

species: Mycobacterium bovis

description: Mycobacterium bovis strain CIP 105234 16S ribosomal RNA gene, partial sequence

description: ASM298228v1 assembly for Mycobacterium tuberculosis variant bovis ATCC 19210


culture collection no.: NCTC 13288, ATCC BAA-688

description: domain/bacteria

full scientific name: Mycobacterium pinnipedii Cousins et al. 2003

species: Mycobacterium pinnipedii

description: Mycobacterium pinnipedii 16S ribosomal RNA gene, partial sequence

description: ASM298227v1 assembly for Mycobacterium tuberculosis variant pinnipedii ATCC BAA-688


description: domain/bacteria

full scientific name: Mycobacterium senriense Abe et al. 2022

species: Mycobacterium senriense

description: Mycobacterium sp. TY59 gene for 16S rRNA, complete sequence

description: ASM1966846v1 assembly for Mycobacterium senriense TY59


description: domain/bacteria

full scientific name: Mycobacterium baixiangningiae (Cheng et al. 2021) Göker et al. 2025

species: Mycobacterium baixiangningiae

synonym: Mycolicibacterium baixiangningiae

full scientific name: Mycolicibacterium baixiangningiae Cheng et al. 2021

genus: Mycolicibacterium

species: Mycolicibacterium baixiangningiae

description: Mycolicibacterium baixiangningiae strain LJ126 16S ribosomal RNA gene, partial sequence

description: ASM1489303v1 assembly for Mycolicibacterium baixiangningiae LJ126

description: ASM1631318v1 assembly for Mycolicibacterium baixiangningiae LJ126


description: domain/bacteria

full scientific name: Mycobacterium aurantiacum (Pan et al. 2022) Göker et al. 2025

species: Mycobacterium aurantiacum

synonym: Mycolicibacterium aurantiacum

full scientific name: Mycolicibacterium aurantiacum Pan et al. 2022

species: Mycolicibacterium aurantiacum

description: Mycolicibacterium aurantiacum strain B3033 16S ribosomal RNA gene, partial sequence

description: ASM1971059v1 assembly for Mycolicibacterium aurantiacum B3033


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium kroppenstedtii Collins et al. 1998

genus: Corynebacterium

species: Corynebacterium kroppenstedtii

synonym: Corynebacterium parakroppenstedtii

synonym: Corynebacterium pseudokroppenstedtii

full scientific name: Corynebacterium parakroppenstedtii Luo et al. 2022

species: Corynebacterium parakroppenstedtii

description: Corynebacterium parakroppenstedtii strain MC-26 16S ribosomal RNA gene, partial sequence

description: ASM1975493v1 assembly for Corynebacterium parakroppenstedtii MC-26


description: domain/bacteria

full scientific name: Corynebacterium pseudokroppenstedtii Luo et al. 2022

species: Corynebacterium pseudokroppenstedtii

description: Corynebacterium pseudokroppenstedtii strain MC-17X 16S ribosomal RNA gene, partial sequence

description: ASM1975494v1 assembly for Corynebacterium pseudokroppenstedtii MC-17X


description: domain/bacteria

family: Gordoniaceae

full scientific name: Gordonia liuliyuniae Huang et al. 2022

genus: Gordonia

species: Gordonia liuliyuniae

description: Gordonia liuliyuniae strain HY366 16S ribosomal RNA gene, partial sequence

description: ASM2173880v1 assembly for Gordonia liuliyuniae HY366


description: domain/bacteria

full scientific name: Gordonia zhenghanii Huang et al. 2022

species: Gordonia zhenghanii

description: ASM2173896v1 assembly for Gordonia zhenghanii HY002


description: domain/bacteria

family: Nocardiaceae

full scientific name: Nocardia rosealba Huang et al. 2022

genus: Nocardia

species: Nocardia rosealba

strain designation: NEAU G4

description: Nocardia rosealba strain NEAU-G4 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Rhodococcus erythropolis (Gray and Thornton 1928) Goodfellow and Alderson 1979 (Approved Lists 1980)

genus: Rhodococcus

species: Rhodococcus erythropolis

synonym: Arthrobacter picolinophilus

synonym: Rhodococcus qingshengii

synonym: Nocardia erythropolis

synonym: Rhodococcus enclensis

synonym: Mycobacterium erythropolis

synonym: Rhodococcus baikonurensis

synonym: Rhodococcus degradans

synonym: Nocardia calcarea

synonym: Rhodococcus jialingiae

full scientific name: Rhodococcus degradans Svec et al. 2015

species: Rhodococcus degradans

description: Rhodococcus qingshengii strain CCM 4446 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Rhodococcus yananensis Jiang et al. 2022

species: Rhodococcus yananensis

description: Rhodococcus yananensis strain FBM22-1 16S ribosomal RNA gene, partial sequence

description: ASM2051552v1 assembly for Rhodococcus yananensis FBM22-1


description: domain/bacteria

full scientific name: Rhodococcus oxybenzonivorans Baek et al. 2022

species: Rhodococcus oxybenzonivorans

description: Rhodococcus oxybenzonivorans strain S2-17 16S ribosomal RNA gene, partial sequence

description: ASM313070v1 assembly for Rhodococcus oxybenzonivorans S2-17


description: domain/bacteria

family: Micromonosporaceae

full scientific name: Nucisporomicrobium flavum Han et al. 2022

genus: Nucisporomicrobium

order: Micromonosporales

species: Nucisporomicrobium flavum

strain designation: NEAU 24


description: domain/bacteria

full scientific name: Micromonospora okii Komaki et al. 2022

genus: Micromonospora

species: Micromonospora okii

description: Micromonospora sp. TP-A0468

description: ASM2088479v1 assembly for Micromonospora okii TP-A0468


description: domain/bacteria

full scientific name: Micromonospora robiginosa Back et al. 2024

species: Micromonospora robiginosa

synonym: Micromonospora ferruginea

full scientific name: Micromonospora ferruginea Back et al. 2021

species: Micromonospora ferruginea


description: domain/bacteria

full scientific name: Micromonospora antibiotica Lee et al. 2022

species: Micromonospora antibiotica

description: Micromonospora antibiotica strain MMS20-R2-23 16S ribosomal RNA gene, partial sequence

description: ASM1759930v1 assembly for Micromonospora antibiotica MMS20-R2-23


description: domain/bacteria

full scientific name: Micromonospora humidisoli Lee et al. 2022

species: Micromonospora humidisoli

description: Micromonospora humidisoli strain MMS20-R2-29 16S ribosomal RNA gene, partial sequence

description: ASM1690095v1 assembly for Micromonospora humidisoli MMS20-R2-29


description: domain/bacteria

full scientific name: Catellatospora tritici Yang et al. 2022

genus: Catellatospora

species: Catellatospora tritici

strain designation: NEAU YM18

description: Catellatospora tritici strain NEAU-YM18 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: Bifidobacterium mizhiense Li et al. 2022

genus: Bifidobacterium

order: Bifidobacteriales

species: Bifidobacterium mizhiense

description: Bifidobacterium sp. S053-2 gene for 16S ribosomal RNA, partial sequence

description: ASM2088475v1 assembly for Bifidobacterium mizhiense S053-2


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: Pseudonocardia terrae Muangham and Duangmal 2022

genus: Pseudonocardia

order: Pseudonocardiales

species: Pseudonocardia terrae

description: Pseudonocardia terrae strain RS11V-5 16S ribosomal RNA gene, partial sequence

description: ASM2134399v1 assembly for Pseudonocardia terrae RS11V-5


description: domain/bacteria

full scientific name: Qaidamihabitans albus Tian et al. 2022

genus: Qaidamihabitans

species: Qaidamihabitans albus

description: Qaidamihabitans albus strain YIM S01255 16S ribosomal RNA gene, partial sequence

description: ASM1646470v1 assembly for Qaidamihabitans albus YIM S01255


description: domain/bacteria

full scientific name: Saccharothrix obliqua Azad et al. 2022

genus: Saccharothrix

species: Saccharothrix obliqua

strain designation: SC 76

description: Saccharothrix sp. SC076 gene for 16S rRNA gene, partial sequence


description: domain/bacteria

full scientific name: Saccharothrix luteola He et al. 2022

species: Saccharothrix luteola

strain designation: NEAU S10

description: Saccharothrix luteola strain NEAU-S10 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Amycolatopsis aidingensis Li et al. 2022

genus: Amycolatopsis

species: Amycolatopsis aidingensis

description: Amycolatopsis aidingensis strain YIM 96748 16S ribosomal RNA gene, partial sequence

description: ASM1888526v1 assembly for Amycolatopsis aidingensis YIM 96748


description: domain/bacteria

full scientific name: Saccharopolyspora soli Veyisoglu et al. 2022

genus: Saccharopolyspora

species: Saccharopolyspora soli

description: Saccharopolyspora soli strain K220 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Propionibacteriaceae

full scientific name: Propioniciclava soli Li et al. 2022

genus: Propioniciclava

order: Propionibacteriales

species: Propioniciclava soli

description: Propioniciclava soli strain YIM S02567 16S ribosomal RNA gene, partial sequence

description: ASM1485800v1 assembly for Propioniciclava soli YIM S02567


description: domain/bacteria

family: Nocardioidaceae

full scientific name: Aeromicrobium stalagmiti Byeon et al. 2022

genus: Aeromicrobium

species: Aeromicrobium stalagmiti

description: Aeromicrobium stalagmiti strain YC3-14 16S ribosomal RNA gene, partial sequence

description: ASM1328374v1 assembly for Aeromicrobium stalagmiti YC3-14


description: domain/bacteria

full scientific name: Nocardioides luti Yoon et al. 2022

genus: Nocardioides

species: Nocardioides luti

description: ASM1421231v1 assembly for Nocardioides luti KIGAM211


description: domain/bacteria

full scientific name: Nocardioides coralli Shi et al. 2022

species: Nocardioides coralli

strain designation: SCSIO 67246

description: Nocardioides coralli strain SCSIO 67246 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Nocardioides nematodiphilus Zhang et al. 2022

species: Nocardioides nematodiphilus

description: Nocardioides nematodiphilus strain R-N-C8 16S ribosomal RNA gene, partial sequence

description: ASM2021652v1 assembly for Nocardioides nematodiphilus R-N-C8


description: domain/bacteria

full scientific name: Nocardioides campestrisoli Zhou et al. 2022

species: Nocardioides campestrisoli

description: Nocardioides campestrisoli strain MC1495 16S ribosomal RNA gene, partial sequence

description: ASM1362443v2 assembly for Nocardioides campestrisoli MC1495


description: domain/bacteria

full scientific name: Nocardioides ochotonae Zhou et al. 2022

species: Nocardioides ochotonae

description: Nocardioides ochotonae strain ZJ1313 16S ribosomal RNA gene, partial sequence

description: ASM1142030v2 assembly for Nocardioides ochotonae ZJ1313


description: domain/bacteria

full scientific name: Nocardioides pantholopis Zhou et al. 2022

species: Nocardioides pantholopis

description: Nocardioides pantholopis strain 603 16S ribosomal RNA gene, partial sequence

description: ASM371008v1 assembly for Nocardioides pantholopis 603


description: domain/bacteria

full scientific name: Nocardioides panacis Park et al. 2022

species: Nocardioides panacis

description: Nocardioides panacis strain G188 16S ribosomal RNA gene, partial sequence

description: ASM1903925v1 assembly for Nocardioides panacis G188


description: domain/bacteria

family: Geodermatophilaceae

full scientific name: Geodermatophilus chilensis Castro et al. 2020

genus: Geodermatophilus

order: Geodermatophilales

species: Geodermatophilus chilensis

description: Geodermatophilus chilensis strain B12 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Blastococcus tunisiensis Louati et al. 2022

genus: Blastococcus

species: Blastococcus tunisiensis

strain designation: BMG 823

description: Blastococcus sp. BMG 823 partial 16S rRNA gene, strain BMG 823

description: IMG-taxon 2634166321 annotated assembly for Blastococcus tunisiensis DSM 46838


culture collection no.: NCIMB 15210, CCMM B1303

description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces sabulosicollis Kusuma et al. 2022

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces sabulosicollis

order: Streptomycetales

strain designation: ICEBB-02, PRKS01-29

description: Streptomyces sabulosicollis strain PRKS01-29 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Streptomyces lydicamycinicus Komaki et al. 2022

species: Streptomyces lydicamycinicus

description: ASM82971v2 assembly for Streptomyces lydicamycinicus NBRC 110027

description: Streptomyces sp. NBRC 110027


description: domain/bacteria

full scientific name: Streptomyces marincola Shi et al. 2022

species: Streptomyces marincola

strain designation: SCSIO 64649

description: Streptomyces marincola strain SCSIO 64649 16S ribosomal RNA gene, partial sequence

description: ASM2041076v1 assembly for Streptomyces marincola SCSIO 64649


description: domain/bacteria

full scientific name: Streptomyces plumbidurans Jiao et al. 2022

species: Streptomyces plumbidurans

description: Streptomyces plumbidurans strain KC 17012 16S ribosomal RNA gene, partial sequence

description: ASM1985722v1 assembly for Streptomyces plumbidurans KC 17012


description: domain/bacteria

full scientific name: Streptomyces sennicomposti Duangupama et al. 2022

species: Streptomyces sennicomposti

description: Streptomyces sp. strain RCPT1-4 16S ribosomal RNA gene, partial sequence

description: ASM1989063v1 assembly for Streptomyces sennicomposti RCPT1-4


description: domain/bacteria

full scientific name: Streptomyces liliifuscus Li et al. 2022

species: Streptomyces liliifuscus

description: Streptomyces liliifuscus strain ZYC-3 16S ribosomal RNA gene, partial sequence

description: ASM1659861v1 assembly for Streptomyces liliifuscus ZYC-3


description: domain/bacteria

full scientific name: Streptomyces liliiviolaceus Li et al. 2022

species: Streptomyces liliiviolaceus

description: Streptomyces liliiviolaceus strain BH-SS-21 16S ribosomal RNA gene, partial sequence

description: ASM1807002v1 assembly for Streptomyces liliiviolaceus BH-SS-21


description: domain/bacteria

full scientific name: Streptomyces montanisoli Lee et al. 2022

species: Streptomyces montanisoli

description: Streptomyces montanisoli strain MMS17-BM035 16S ribosomal RNA gene, partial sequence

description: ASM1781324v1 assembly for Streptomyces montanisoli MMS17-BM035


description: domain/bacteria

full scientific name: Streptomyces barringtoniae Wai et al. 2022

species: Streptomyces barringtoniae

description: Streptomyces sp. JA03 gene for 16S rRNA, partial sequence

description: ASM2081959v1 assembly for Streptomyces barringtoniae JA03


description: domain/bacteria

full scientific name: Streptomyces durocortorensis Cassarini et al. 2022

species: Streptomyces durocortorensis

description: Streptomyces durocortorensis strain RHZ10 16S ribosomal RNA gene, partial sequence

description: ASM1690103v1 assembly for Streptomyces durocortorensis RHZ10


description: domain/bacteria

full scientific name: Kitasatospora humi Klaysubun et al. 2022

genus: Kitasatospora

species: Kitasatospora humi

description: Kitasatospora humi strain RB6PN24 16S ribosomal RNA gene, partial sequence

description: ASM2090798v1 assembly for Kitasatospora humi RB6PN24


class: Coriobacteriia

description: domain/bacteria

family: Eggerthellaceae

full scientific name: Xiamenia xianingshaonis Zhang et al. 2022

genus: Xiamenia

order: Eggerthellales

species: Xiamenia xianingshaonis

description: Xiamenia xianingshaonis strain zg-886 16S ribosomal RNA gene, partial sequence

description: ASM1139245v1 assembly for Xiamenia xianingshaonis zg-886

description: ASM1794586v1 assembly for Xiamenia xianingshaonis zg-886


description: domain/bacteria

full scientific name: Berryella wangjianweii Zhang et al. 2022

genus: Berryella

species: Berryella wangjianweii

description: Berryella wangjianweii strain zg-1050 16S ribosomal RNA gene, partial sequence

description: ASM1320115v1 assembly for Berryella wangjianweii zg-1050


culture collection no.: CSUR P3277, CCUG 70680, Marseille P3277

description: domain/bacteria

full scientific name: Raoultibacter timonensis Traore et al. 2022

genus: Raoultibacter

species: Raoultibacter timonensis

synonym: Raoultibacter timonensis

description: Raoultibacter sp. Marseille-P3277T partial 16S rRNA gene, strain Marseille-P3277T

description: PRJEB23748 assembly for Raoultibacter timonensis Marseille-P3277


description: domain/bacteria

family: Atopobiaceae

full scientific name: Granulimonas faecalis Morinaga et al. 2022

genus: Granulimonas

order: Coriobacteriales

species: Granulimonas faecalis

strain designation: OPF53, Atopobiaceae. Strains: 1, data from this study

description: Atopobiaceae bacterium OPF53 gene for 16S ribosomal RNA, partial sequence

description: ASM2283471v1 assembly for Granulimonas faecalis OPF53


description: domain/bacteria

full scientific name: Leptogranulimonas caecicola Morinaga et al. 2022

genus: Leptogranulimonas

species: Leptogranulimonas caecicola

description: Atopobiaceae bacterium TOC12 gene for 16S ribosomal RNA, partial sequence

description: ASM2316840v1 assembly for Leptogranulimonas caecicola TOC12


class: Acidimicrobiia

description: domain/bacteria

family: Iamiaceae

full scientific name: Rhabdothermincola salaria Gao et al. 2022

genus: Rhabdothermincola

order: Acidimicrobiales

species: Rhabdothermincola salaria

description: Rhabdothermincola salaria strain EGI L10124 16S ribosomal RNA gene, partial sequence

description: ASM2124644v1 assembly for Rhabdothermincola salaria EGI L10124


description: domain/bacteria

family: Veillonellaceae

full scientific name: Veillonella hominis Liu et al. 2022

genus: Veillonella

order: Veillonellales

species: Veillonella hominis

strain designation: NSJ 78


description: domain/bacteria

full scientific name: Megasphaera hominis Liu et al. 2022

genus: Megasphaera

species: Megasphaera hominis

strain designation: NSJ 59

description: Megasphaera hominis strain NSJ-59 16S ribosomal RNA gene, partial sequence


class: Clostridia

description: domain/bacteria

family: Oscillospiraceae

full scientific name: Ligaoa zhengdingensis Liu et al. 2022

genus: Ligaoa

order: Eubacteriales

species: Ligaoa zhengdingensis

strain designation: NSJ 31


description: domain/bacteria

full scientific name: Youxingia wuxianensis Liu et al. 2022

genus: Youxingia

species: Youxingia wuxianensis

strain designation: NSJ 64


description: domain/bacteria

full scientific name: Hydrogeniiclostridium hominis corrig. Liu et al. 2022

genus: Hydrogeniiclostridium

species: Hydrogeniiclostridium hominis

synonym: Hydrogeniiclostidium hominis

full scientific name: Hydrogeniiclostridium hominis Liu et al. 2022

strain designation: NSJ 41


description: domain/bacteria

full scientific name: Zongyangia hominis Liu et al. 2022

genus: Zongyangia

species: Zongyangia hominis

strain designation: NSJ 54


description: domain/bacteria

full scientific name: Fumia xinanensis Liu et al. 2022

genus: Fumia

species: Fumia xinanensis

strain designation: NSJ 33


description: domain/bacteria

full scientific name: Anaerofilum hominis Liu et al. 2022

genus: Anaerofilum

species: Anaerofilum hominis

description: ASM1428727v1 assembly for Anaerofilum hominis BX8


description: domain/bacteria

full scientific name: Oscillibacter hominis Liu et al. 2022

genus: Oscillibacter

species: Oscillibacter hominis

strain designation: NSJ 62


description: domain/bacteria

full scientific name: Pseudoflavonifractor hominis Liu et al. 2022

genus: Pseudoflavonifractor

species: Pseudoflavonifractor hominis


description: domain/bacteria

full scientific name: Lawsonibacter celer Liu et al. 2022

genus: Lawsonibacter

species: Lawsonibacter celer

strain designation: NSJ 47


description: domain/bacteria

full scientific name: Lawsonibacter faecis Liu et al. 2022

species: Lawsonibacter faecis

strain designation: NSJ 52


description: domain/bacteria

full scientific name: Lawsonibacter hominis Liu et al. 2022

species: Lawsonibacter hominis

strain designation: NSJ 51


description: domain/bacteria

full scientific name: Dysosmobacter hominis Liu et al. 2022

genus: Dysosmobacter

species: Dysosmobacter hominis

strain designation: NSJ 60


description: domain/bacteria

full scientific name: Acetivibrio cellulolyticus Patel et al. 1980

genus: Acetivibrio

species: Acetivibrio cellulolyticus

synonym: Acetivibrio cellulosolvens

synonym: Hungateiclostridium cellulolyticum

full scientific name: Acetivibrio cellulosolvens Khan et al. 1984

species: Acetivibrio cellulosolvens

strain designation: BAS, NRC 2936

description: Acetivibrio cellulosolvens (ATCC 35928) 16S ribosomal RNA (16S rRNA)


description: domain/bacteria

full scientific name: Agathobaculum faecis Liu et al. 2022

genus: Agathobaculum

species: Agathobaculum faecis

strain designation: NSJ 28


description: domain/bacteria

family: Alcaligenaceae

full scientific name: Pusillimonas minor Yao et al. 2022

genus: Pusillimonas

order: Burkholderiales

species: Pusillimonas minor

synonym: Neopusillimonas minor

description: ASM1423786v1 assembly for Pusillimonas minor YC-7-48


description: domain/bacteria

full scientific name: Mesopusillimonas faecipullorum (Lin et al. 2022) Babich et al. 2023

genus: Mesopusillimonas

species: Mesopusillimonas faecipullorum

synonym: Pusillimonas faecipullorum

full scientific name: Pusillimonas faecipullorum Lin et al. 2022

species: Pusillimonas faecipullorum

description: Pusillimonas sp. strain CC-YST705 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Neopusillimonas maritima (Li et al. 2020) Babich et al. 2023

genus: Neopusillimonas

species: Neopusillimonas maritima

synonym: Pusillimonas maritima

full scientific name: Pusillimonas maritima Li et al. 2020

species: Pusillimonas maritima

description: Neopusillimonas maritima strain 17-4A 16S ribosomal RNA gene, partial sequence

description: ASM357659v1 assembly for Neopusillimonas maritima 17-4A

description: ASM4093045v2 assembly for Neopusillimonas maritima KCTC 62121


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Anaerosacchariphilus hominis Liu et al. 2022

genus: Anaerosacchariphilus

species: Anaerosacchariphilus hominis

strain designation: NSJ 68


description: domain/bacteria

full scientific name: Roseburia difficilis Liu et al. 2022

genus: Roseburia

species: Roseburia difficilis

strain designation: NSJ 67


description: domain/bacteria

full scientific name: Roseburia zhanii Liu et al. 2022

species: Roseburia zhanii


description: domain/bacteria

full scientific name: Zhenhengia yiwuensis Liu et al. 2022

genus: Zhenhengia

species: Zhenhengia yiwuensis

strain designation: NSJ 12


description: domain/bacteria

full scientific name: Blautia celeris Liu et al. 2022

genus: Blautia

species: Blautia celeris

strain designation: NSJ 34


description: domain/bacteria

full scientific name: Coprococcus hominis Liu et al. 2022

genus: Coprococcus

species: Coprococcus hominis

synonym: Coprococcus hominis

strain designation: NSJ 10


description: domain/bacteria

full scientific name: Jutongia huaianensis Liu et al. 2022

genus: Jutongia

species: Jutongia huaianensis

strain designation: NSJ 37


description: domain/bacteria

full scientific name: Dorea hominis Liu et al. 2022

genus: Dorea

species: Dorea hominis

strain designation: NSJ 36


description: domain/bacteria

full scientific name: Mediterraneibacter hominis Liu et al. 2022

genus: Mediterraneibacter

species: Mediterraneibacter hominis

strain designation: NSJ 55


class: Erysipelotrichia

description: domain/bacteria

family: Erysipelotrichaceae

full scientific name: Hoskinsella hominis (Liu et al. 2022) Pudlo et al. 2026

genus: Hoskinsella

order: Erysipelotrichales

species: Hoskinsella hominis

synonym: Eubacterium hominis

synonym: Amedibacillus hominis

synonym: Hoskinsella hominifaecis

family: Eubacteriaceae

full scientific name: Eubacterium hominis Liu et al. 2022

genus: Eubacterium

species: Eubacterium hominis