description: domain/bacteria

family: Lachnospiraceae

full scientific name: <I>Dorea</I> Taras et al. 2002

genus: Dorea

order: Eubacteriales

species: Dorea sp.

full scientific name: Dorea sp.


Matching level: species

class: Actinomycetes

description: domain/bacteria

domain: Bacteria

family: Micromonosporaceae

full scientific name: Micromonospora gifhornensis (Rheims et al. 1998) Nouioui et al. 2018

genus: Micromonospora

keyword: phylum/actinomycetota

order: Micromonosporales

phylum: Actinomycetota

species: Micromonospora gifhornensis

synonym: Verrucosispora gifhornensis

class: Actinobacteria

phylum: Actinobacteria

type strain: no


class: Desulfuromonadia

description: domain/bacteria

family: Geobacteraceae

full scientific name: <I>Geobacter</I> Lovley et al. 1995

genus: Geobacter

keyword: phylum/thermodesulfobacteriota

order: Geobacterales

phylum: Thermodesulfobacteriota

species: Geobacter sp.

synonym: Trichlorobacter

synonym: Geomobilibacter

class: Deltaproteobacteria

full scientific name: Geobacter sp.

order: Desulfuromonadales

phylum: Proteobacteria

database: nuccore

description: Geobacter sp. IFRC128 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium kalinowskii Schaffert et al. 2021

genus: Corynebacterium

order: Mycobacteriales

species: Corynebacterium kalinowskii

full scientific name: Corynebacterium kalinowskii Schaffert et al., 2021

type strain: yes

description: Corynebacterium kalinowskii strain 1959 16S ribosomal RNA gene, partial sequence

assembly level: complete

description: ASM973438v1 assembly for Corynebacterium kalinowskii 1959


class: Gammaproteobacteria

description: domain/bacteria

family: Piscirickettsiaceae

full scientific name: <I>Thiomicrospira</I> Kuenen and Veldkamp 1972 (Approved Lists 1980)

genus: Thiomicrospira

keyword: phylum/pseudomonadota

order: Beggiatoales

phylum: Pseudomonadota

species: Thiomicrospira sp.

synonym: Thialkalimicrobium

synonym: Thioalkalimicrobium

full scientific name: Thiomicrospira sp.

order: Thiotrichales

description: Thiomicrospira sp. V2501 gene for 16S rRNA, partial sequence


class: Methanosarcinia

description: domain/archaea

domain: Archaea

family: Methanosarcinaceae

full scientific name: Methanohalophilus profundi L'Haridon et al. 2021

genus: Methanohalophilus

keyword: phylum/methanobacteriota

order: Methanosarcinales

phylum: Methanobacteriota

species: Methanohalophilus profundi

class: Methanomicrobia

full scientific name: Methanohalophilus profundi L'Haridon et al. 2020

phylum: Euryarchaeota

strain designation: SLHTYRO, SLHTYROT

description: Methanohalophilus profundi strain SLHTYRO 16S ribosomal RNA gene, partial sequence

assembly level: scaffold

description: ASM413785v1 assembly for Methanohalophilus profundi SLHTYRO


class: Synergistia

description: domain/bacteria

family: Dethiosulfovibrionaceae

full scientific name: <I>Dethiosulfovibrio</I> Magot et al. 1997

genus: Dethiosulfovibrio

keyword: phylum/synergistota

order: Synergistales

phylum: Synergistota

species: Dethiosulfovibrio sp.

family: Synergistaceae

full scientific name: Dethiosulfovibrio sp.

phylum: Synergistetes


class: Alphaproteobacteria

description: domain/bacteria

family: Roseobacteraceae

full scientific name: Roseovarius tolerans Labrenz et al. 1999

genus: Roseovarius

order: Rhodobacterales

species: Roseovarius tolerans

family: Rhodobacteraceae

assembly level: contig

description: ASM124771v1 assembly for Roseovarius tolerans EL-164

description: ASM2888539v1 assembly for Roseovarius tolerans EL-164


class: Deinococci

description: domain/bacteria

family: Deinococcaceae

full scientific name: <I>Deinococcus</I> Brooks and Murray 1981

genus: Deinococcus

keyword: phylum/deinococcota

order: Deinococcales

phylum: Deinococcota

species: Deinococcus sp.

synonym: Deinobacter

full scientific name: Deinococcus sp.

phylum: Deinococcus-Thermus


class: Bacilli

description: domain/bacteria

family: Caryophanaceae

full scientific name: Metalysinibacillus saudimassiliensis Gupta and Patel 2020

genus: Metalysinibacillus

keyword: phylum/bacillota

order: Caryophanales

phylum: Bacillota

species: Metalysinibacillus saudimassiliensis

synonym: Lysinibacillus saudimassiliensis

phylum: Firmicutes

description: Lysinibacillus sp. 13S34_air partial 16S rRNA gene, isolate 13S34_air

description: PRJEB5506_assembly_1 assembly for Metalysinibacillus saudimassiliensis 13S34_air


description: domain/bacteria

family: Geodermatophilaceae

full scientific name: <I>Geodermatophilus</I> Luedemann 1968 (Approved Lists 1980)

genus: Geodermatophilus

order: Geodermatophilales

species: Geodermatophilus sp.

synonym: Petropleomorpha

synonym: Pleomorpha

full scientific name: Geodermatophilus sp.


description: domain/bacteria

strain designation: KB 42


description: domain/bacteria

description: Geodermatophilus sp. strain CPCC 203550 16S ribosomal RNA gene, partial sequence.

description: ASM1068674v1 assembly for Geodermatophilus normandii I12A-02606


description: domain/bacteria

full scientific name: <I>Modestobacter</I> Mevs et al. 2000

genus: Modestobacter

species: Modestobacter sp.

full scientific name: Modestobacter sp.


description: domain/bacteria

full scientific name: Corynebacterium occultum Schaffert et al. 2021

species: Corynebacterium occultum

full scientific name: Corynebacterium occultum Schaffert et al., 2021

description: Corynebacterium occultum strain 2039 16S ribosomal RNA gene, partial sequence

description: ASM973442v1 assembly for Corynebacterium occultum 2039


description: domain/bacteria

family: Bacillaceae

full scientific name: Oceanobacillus zhaokaii Zhu et al. 2020

genus: Oceanobacillus

species: Oceanobacillus zhaokaii

description: Oceanobacillus zhaokaii strain 160 16S ribosomal RNA gene, partial sequence

description: ASM335200v1 assembly for Oceanobacillus zhaokaii 160


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Longirhabdus pacifica Chen et al. 2019

genus: Longirhabdus

species: Longirhabdus pacifica

description: Longirhabdus pacifica strain SCSIO 06110 16S ribosomal RNA gene, partial sequence

description: ASM411508v1 assembly for Longirhabdus pacifica SCSIO 06110


description: domain/bacteria

family: Microbacteriaceae

full scientific name: <I>Leifsonia</I> Evtushenko et al. 2000

genus: Leifsonia

order: Micrococcales

species: Leifsonia sp.

synonym: Leifsonia

synonym: Diaminobutyricibacter

full scientific name: Leifsonia sp.

description: Microbacteriaceae bacterium 581 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Limosilactobacillus mucosae (Roos et al. 2000) Zheng et al. 2020

genus: Limosilactobacillus

order: Lactobacillales

species: Limosilactobacillus mucosae

synonym: Lactobacillus mucosae

description: Limosilactobacillus mucosae strain ClaCZ100 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Haemophilus pleuropneumoniae corrig. Shope 1964 (Approved Lists 1980)

genus: Haemophilus

order: Pasteurellales

species: Haemophilus pleuropneumoniae

synonym: Hemophilus pleuropneumoniae

synonym: Actinobacillus pleuropneumoniae

full scientific name: Actinobacillus pleuropneumoniae (Shope 1964) Pohl et al. 1983

genus: Actinobacillus

species: Actinobacillus pleuropneumoniae

description: ASM2195326v1 assembly for Actinobacillus pleuropneumoniae 16287-1


description: domain/bacteria

description: ASM2195308v1 assembly for Actinobacillus pleuropneumoniae 7311555


description: domain/bacteria


class: Planctomycetia

description: domain/bacteria

family: Lacipirellulaceae

full scientific name: Botrimarina mediterranea Wiegand et al. 2021

genus: Botrimarina

keyword: phylum/planctomycetota

order: Pirellulales

phylum: Planctomycetota

species: Botrimarina mediterranea

full scientific name: Botrimarina mediterranea Wiegand et al. 2020

phylum: Planctomycetes

description: Botrimarina mediterranea strain Spa11 16S ribosomal RNA gene, partial sequence

assembly level: chromosome

description: ASM775326v1 assembly for Botrimarina mediterranea Spa11


description: domain/bacteria

full scientific name: <I>Brevibacillus</I> Shida et al. 1996

genus: Brevibacillus

species: Brevibacillus sp.

full scientific name: Brevibacillus sp.

description: ASM1105913v1 assembly for Brevibacillus sp. SYP-B805


description: domain/bacteria


description: domain/bacteria

full scientific name: Geobacillus mahadia Mohtar et al. 2016

genus: Geobacillus

species: Geobacillus mahadia

full scientific name: Geobacillus sp.

species: Geobacillus sp.


description: domain/bacteria

family: Streptosporangiaceae

full scientific name: <I>Nonomuraea</I> corrig. Zhang et al. 1998

genus: Nonomuraea

order: Streptosporangiales

species: Nonomuraea sp.

synonym: Sebekia

synonym: Nonomuria

full scientific name: Nonomuraea sp.

description: Nonomuraea sp. CPCC202691 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Nonomuraea sp. 212202 16S ribosomal RNA gene, partial sequence


description: domain/bacteria


description: domain/bacteria

family: Actinomycetaceae

full scientific name: <I>Trueperella</I> Yassin et al. 2011

genus: Trueperella

order: Actinomycetales

species: Trueperella sp.

full scientific name: Trueperella sp.


description: domain/bacteria

full scientific name: Trueperella pecoris Schönecker et al. 2021

species: Trueperella pecoris

description: Trueperella pecoris strain 19M2397 16S ribosomal RNA gene, partial sequence

description: ASM1492638v1 assembly for Trueperella pecoris 19M2397


description: domain/bacteria

description: ASM1760360v1 assembly for Trueperella pecoris 15IMD0307


description: domain/bacteria

family: Pirellulaceae

full scientific name: Stieleria neptunia Sandargo et al. 2021

genus: Stieleria

species: Stieleria neptunia

full scientific name: Stieleria neptunia Sandargo et al. 2020


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces rhizosphaericus corrig. Sembiring et al. 2001

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces rhizosphaericus

synonym: Streptomyces rhizosphaerius

full scientific name: Streptomyces rhizosphaericus Sembiring et al. 2001

order: Streptomycetales


description: domain/bacteria

full scientific name: <I>Blastococcus</I> Ahrens and Moll 1970 (Approved Lists 1980)

genus: Blastococcus

species: Blastococcus sp.

full scientific name: Blastococcus sp.


description: domain/bacteria

description: Candidatus Blastococcus massiliensis AP3 16S ribosomal RNA gene, partial sequence

description: B.massiliensis assembly for Candidatus Blastococcus massiliensis AP3


description: domain/bacteria

family: Actinomycetales, not assigned to family

full scientific name: Aquiluna borgnonia Pitt et al. 2021

genus: Aquiluna

species: Aquiluna borgnonia

description: Aquiluna borgnonia strain 15G-AUS-rot 16S ribosomal RNA gene, partial sequence

description: ASM1328385v1 assembly for Aquiluna borgnonia 15G-AUS-rot


description: domain/bacteria

full scientific name: Paenibacillus phocaensis Tidjani Alou et al. 2017

genus: Paenibacillus

species: Paenibacillus phocaensis

description: Paenibacillus sp. MT24 partial 16S rRNA gene, strain MT24

description: Paenibacillus phoceensis assembly for Paenibacillus phocaensis mt24


description: domain/bacteria

family: Nocardiopsidaceae

genus: Nocardiopsis

species: Nocardiopsis xinjiangensis

synonym: Brachystreptospora xinjiangensis

family: Nocardiopsaceae

full scientific name: Nocardiopsis xinjiangensis Li et al. 2003 emend. Nouioui et al. 2018


description: domain/bacteria

full scientific name: Nocardiopsis xinjiangensis Li et al. 2003


description: domain/bacteria

full scientific name: <I>Streptomonospora</I> corrig. Cui et al. 2001

genus: Streptomonospora

species: Streptomonospora sp.

synonym: Streptimonospora

full scientific name: Streptomonospora sp.


description: domain/bacteria

full scientific name: Litoribacterium kuwaitense Mahmoud et al. 2021

genus: Litoribacterium

species: Litoribacterium kuwaitense

description: ASM1105815v1 assembly for Litoribacterium kuwaitense SIJ1


class: Clostridia

description: domain/bacteria

family: Lachnospiraceae

full scientific name: Anaerotignum lactatifermentans (van der Wielen et al. 2002) Ueki et al. 2017

genus: Anaerotignum

order: Eubacteriales

species: Anaerotignum lactatifermentans

synonym: Clostridium lactatifermentans

description: Anaerotignum lactatifermentans strain ClaCZ174 16S ribosomal RNA gene, partial sequence

description: ASM1498293v1 assembly for Anaerotignum lactatifermentans DSM 109233


description: domain/bacteria

family: Bartonellaceae

full scientific name: <I>Mesorhizobium</I> Jarvis et al. 1997

genus: Mesorhizobium

order: Hyphomicrobiales

species: Mesorhizobium sp.

synonym: Allomesorhizobium

synonym: Neomesorhizobium

family: Phyllobacteriaceae

full scientific name: Mesorhizobium sp.


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

order: Enterobacterales

species: Escherichia coli

synonym: Bacillus coli

strain designation: PTC E017


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: Kibdelosporangium persicum Safaei et al. 2021

genus: Kibdelosporangium

order: Pseudonocardiales

species: Kibdelosporangium persicum

description: 4NS15_2019_02_14 assembly for Kibdelosporangium persicum 4NS15


description: domain/bacteria

full scientific name: Okibacterium fritillariae Evtushenko et al. 2002

genus: Okibacterium

species: Okibacterium fritillariae


description: domain/bacteria

family: Caryophanaceae

full scientific name: Psychrobacillus psychrodurans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011

genus: Psychrobacillus

species: Psychrobacillus psychrodurans

synonym: Bacillus psychrodurans


description: domain/bacteria

full scientific name: Psychrobacillus psychrotolerans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011

species: Psychrobacillus psychrotolerans

synonym: Bacillus psychrotolerans


description: domain/bacteria

full scientific name: Lactobacillus corticis Tohno et al. 2021

genus: Lactobacillus

species: Lactobacillus corticis

description: ASM1832764v1 assembly for Lactobacillus corticis B40


description: domain/bacteria

family: Erythrobacteraceae

full scientific name: Caenibius estronivorus (Qin et al. 2021) Wang et al. 2025

genus: Caenibius

order: Sphingomonadales

species: Caenibius estronivorus

synonym: Altererythrobacter estronivorus

synonym: Croceicoccus estronivorus

full scientific name: Croceicoccus estronivorus Kim et al. 2021

genus: Croceicoccus

species: Croceicoccus estronivorus

description: Croceicoccus estronivorus 16S ribosomal RNA gene, partial sequence

description: ASM162532v1 assembly for Croceicoccus estronivorus MH-B5


description: domain/bacteria

family: Roseobacteraceae

full scientific name: <I>Sulfitobacter</I> Sorokin 1996

genus: Sulfitobacter

order: Rhodobacterales

species: Sulfitobacter sp.

synonym: Staleya

synonym: Oceanibulbus

family: Rhodobacteraceae

full scientific name: Sulfitobacter sp.

description: Rhodobacteraceae bacterium D17 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Bacillaceae

full scientific name: Metabacillus sediminilitoris Mao et al. 2020

genus: Metabacillus

species: Metabacillus sediminilitoris


class: Bacteroidia

description: domain/bacteria

family: Prevotellaceae

full scientific name: <I>Prevotella</I> Shah and Collins 1990

genus: Prevotella

keyword: phylum/bacteroidota

order: Bacteroidales

phylum: Bacteroidota

species: Prevotella sp.

synonym: Leyella

synonym: Hoylesella

synonym: Xylanibacter

synonym: Segatella

full scientific name: Prevotella sp.

phylum: Bacteroidetes

description: Prevotella conceptionensis strain 9403948 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Prevotella lascolaii Diop et al. 2021

species: Prevotella lascolaii

synonym: Leyella lascolaii

class: Not assigned to order

family: Not assigned to family

full scientific name: Leyella lascolaii (Diop et al. 2021) Hitch et al. 2023

genus: Leyella

order: Not assigned to order

phylum: Not assigned to order

species: Leyella lascolaii

description: Prevotella sp. KHD1 partial 16S rRNA gene, strain KHD3

description: PRJEB13540 assembly for Leyella lascolaii khD1


description: domain/bacteria

full scientific name: Xylanibacter rodentium Hitch et al. 2023

genus: Xylanibacter

species: Xylanibacter rodentium

full scientific name: Xylanibacter rodentium

strain designation: spf1, PROD

description: ASM1316657v1 assembly for Xylanibacter rodentium PROD


description: domain/bacteria

full scientific name: Xylanibacter muris Hitch et al. 2023

species: Xylanibacter muris

full scientific name: Xylanibacter muris

strain designation: spf2, PMUR

description: ASM1316660v1 assembly for Xylanibacter muris PMUR


description: domain/bacteria

full scientific name: Palleniella intestinalis Hitch et al. 2023

genus: Palleniella

species: Palleniella intestinalis

full scientific name: Palleniella intestinalis

strain designation: Nlrp6High, PINT

description: ASM1316659v1 assembly for Palleniella intestinalis PINT


description: domain/bacteria

strain designation: PJ1A, Janvier 1a

description: ASM1316654v1 assembly for Prevotella sp. PJ1A


description: domain/bacteria

full scientific name: Xylanibacter caecicola Afrizal et al. 2025

species: Xylanibacter caecicola

full scientific name: Xylanibacter caecicola

strain designation: ChR, PCHR

description: ASM1316651v1 assembly for Xylanibacter caecicola PCHR


description: domain/bacteria

family: Micrococcaceae

full scientific name: <I>Kocuria</I> Stackebrandt et al. 1995

genus: Kocuria

phylum: Actinomycetota

species: Kocuria sp.

synonym: Pelczaria

full scientific name: Kocuria sp.

phylum: Actinobacteria


description: domain/bacteria

full scientific name: <I>Nesterenkonia</I> Stackebrandt et al. 1995

genus: Nesterenkonia

species: Nesterenkonia sp.

full scientific name: Nesterenkonia sp.


description: domain/bacteria

strain designation: Challenge test 838


description: domain/bacteria

family: Glycomycetaceae

full scientific name: <I>Glycomyces</I> Labeda et al. 1985

genus: Glycomyces

order: Glycomycetales

species: Glycomyces sp.

full scientific name: Glycomyces sp.


description: domain/bacteria

family: Nocardiaceae

full scientific name: Rhodococcus daqingensis Wang et al. 2019

genus: Rhodococcus

order: Mycobacteriales

species: Rhodococcus daqingensis

description: ASM4266561v1 assembly for Rhodococcus daqingensis CGMCC 1.13630


description: domain/bacteria

full scientific name: <I>Halobacillus</I> Spring et al. 1996

genus: Halobacillus

order: Caryophanales

species: Halobacillus sp.

full scientific name: Halobacillus sp.


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Limosilactobacillus ingluviei (Baele et al. 2003) Zheng et al. 2020

genus: Limosilactobacillus

order: Lactobacillales

species: Limosilactobacillus ingluviei

synonym: Lactobacillus ingluviei

synonym: Lactobacillus thermotolerans

description: Limosilactobacillus ingluviei strain ClaCZ22 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Ligilactobacillus saerimneri (Pedersen and Roos 2004) Zheng et al. 2020

genus: Ligilactobacillus

species: Ligilactobacillus saerimneri

synonym: Lactobacillus saerimneri

description: Ligilactobacillus saerimneri strain ClaCZ24 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Lacipirellulaceae

full scientific name: Posidoniimonas polymericola Wiegand et al. 2021

genus: Posidoniimonas

order: Pirellulales

species: Posidoniimonas polymericola

full scientific name: Posidoniimonas polymericola Wiegand et al. 2020

description: Posidoniimonas polymericola strain Pla123a 16S ribosomal RNA gene, partial sequence

description: ASM785993v1 assembly for Posidoniimonas polymericola Pla123a


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces mesophilus Tokatli et al. 2021

genus: Streptomyces

species: Streptomyces mesophilus

description: Streptomyces mesophilus strain YC504 16S ribosomal RNA gene, partial sequence

description: ASM1104499v1 assembly for Streptomyces mesophilus YC504


description: domain/bacteria

family: Streptosporangiaceae

full scientific name: Microbispora sitophila Guo et al. 2021

genus: Microbispora

order: Streptosporangiales

species: Microbispora sitophila

description: Microbispora sitophila 16S ribosomal RNA gene, partial sequence

description: ASM1489224v1 assembly for Microbispora sitophila NEAU-D428


Matching level: subspecies

description: domain/bacteria

full scientific name: Lactobacillus kefiranofaciens subsp. kefiranofaciens (Fujisawa et al. 1988) Vancanneyt et al. 2004

genus: Lactobacillus

strain designation: KR, SB-322b

description: ASM227656v1 assembly for Lactobacillus kefiranofaciens KR


class: Desulfovibrionia

description: domain/bacteria

family: Desulfovibrionaceae

full scientific name: Megalodesulfovibrio paquesii (van Houten et al. 2009) Waite et al. 2020

genus: Megalodesulfovibrio

order: Desulfovibrionales

phylum: Thermodesulfobacteriota

species: Megalodesulfovibrio paquesii

synonym: Desulfovibrio paquesii

phylum: Proteobacteria

strain designation: DvS


description: domain/bacteria

full scientific name: Lactobacillus kitasatonis Mukai et al. 2003

species: Lactobacillus kitasatonis

description: Lactobacillus kitasatonis strain ClaCZ130 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus urinalis Collins et al. 2000

genus: Streptococcus

species: Streptococcus urinalis

description: Streptococcus urinalis strain GHB 2807 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Microbacteriaceae

full scientific name: Herbiconiux daphnes corrig. Deng et al. 2024

genus: Herbiconiux

order: Micrococcales

species: Herbiconiux daphnes

synonym: Herbiconiux daphne

full scientific name: Herbiconiux daphnes Deng et al. 2024


description: domain/bacteria

full scientific name: Herbiconiux oxytropis Deng et al. 2024

species: Herbiconiux oxytropis


description: domain/bacteria

full scientific name: <I>Herbiconiux</I> Behrendt et al. 2011

species: Herbiconiux sp.

full scientific name: Herbiconiux sp.


description: domain/bacteria

description: Microbacteriaceae bacterium 772 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: <I>Marinococcus</I> Hao et al. 1985

genus: Marinococcus

species: Marinococcus sp.

full scientific name: Marinococcus sp.


description: domain/bacteria

full scientific name: <I>Virgibacillus</I> Heyndrickx et al. 1998

genus: Virgibacillus

species: Virgibacillus sp.

synonym: Salibacillus

synonym: Paracerasibacillus

full scientific name: Virgibacillus sp.

description: Virgibacillus sp. NCCP-134 gene for 16S rRNA, partial sequence.


description: domain/bacteria

description: Virgibacillus sp. SK1-1-8 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Virgibacillus sp. SKW19 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Virgibacillus sp. SK32 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Virgibacillus sp. SK39 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Virgibacillus sp. JSM 103043 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Virgibacillus sp. C4 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Halolactibacillus miurensis Ishikawa et al. 2005

genus: Halolactibacillus

species: Halolactibacillus miurensis

description: Halolactibacillus sp. 9G 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Paracoccaceae

full scientific name: Paracoccus tegillarcae Lee et al. 2019

genus: Paracoccus

phylum: Pseudomonadota

species: Paracoccus tegillarcae

description: Paracoccus tegillarcae strain BM15 16S ribosomal RNA gene, partial sequence

description: ASM284730v1 assembly for Paracoccus tegillarcae BM15


description: domain/bacteria

full scientific name: <I>Anoxybacillus</I> Pikuta et al. 2000

genus: Anoxybacillus

species: Anoxybacillus sp.

full scientific name: Anoxybacillus sp.

description: Anoxybacillus sp. SCSIO 15096 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Anoxybacillus flavithermus strain AK1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Anoxybacillus sp. DT3-1 16S ribosomal RNA gene, partial sequence

description: DT3-1dn assembly for Anoxybacillus gonensis DT3-1


description: domain/bacteria

description: Anoxybacillus sp. SK3-4 16S ribosomal RNA gene, partial sequence

description: SK3-4dn assembly for Anoxybacillus ayderensis SK3-4


description: domain/bacteria

family: Peptoniphilaceae

full scientific name: Peptoniphilus vaginalis Diop et al. 2016

genus: Peptoniphilus

order: Tissierellales

species: Peptoniphilus vaginalis

synonym: Peptoniphilus vaginalis

description: Peptoniphilus sp. KHD2 partial 16S rRNA gene, strain KHD2


description: domain/bacteria

full scientific name: <I>Filobacillus</I> Schlesner et al. 2001

genus: Filobacillus

species: Filobacillus sp.

full scientific name: Filobacillus sp.


description: domain/bacteria

full scientific name: Microbacterium algeriense Lenchi et al. 2020

genus: Microbacterium

species: Microbacterium algeriense

description: ASM886800v1 assembly for Microbacterium algeriense G1


description: domain/bacteria

full scientific name: Streptomyces yanii Liu et al. 2005

order: Kitasatosporales

species: Streptomyces yanii

order: Streptomycetales

description: Streptomyces sp. MV14 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Ectothiorhodospiraceae

full scientific name: Acidihalobacter yilgarnensis Khaleque et al. 2020

genus: Acidihalobacter

order: Chromatiales

species: Acidihalobacter yilgarnensis

description: Acidihalobacter yilgarnensis strain F5 16S ribosomal RNA gene, partial sequence

description: ASM175324v1 assembly for Acidihalobacter yilgarnensis F5


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: <I>Actinopolyspora</I> Gochnauer et al. 1975 (Approved Lists 1980)

genus: Actinopolyspora

order: Pseudonocardiales

species: Actinopolyspora sp.

family: Actinopolysporaceae

full scientific name: Actinopolyspora sp.

order: Actinopolysporales


description: domain/bacteria

family: Enterobacteriaceae

genus: Enterobacter

order: Enterobacterales

species: Enterobacter asburiae

synonym: Enterobacter muelleri

full scientific name: Enterobacter asburiae Brenner et al. 1988 emend. Hoffmann et al. 2005


description: domain/bacteria

family: Dermacoccaceae

full scientific name: <I>Dermacoccus</I> Stackebrandt et al. 1995

genus: Dermacoccus

species: Dermacoccus sp.

full scientific name: Dermacoccus sp.

description: Dermacoccus sp. SST-20 partial 16S rRNA gene, strain SST-20


description: domain/bacteria

full scientific name: <I>Plantibacter</I> Behrendt et al. 2002

genus: Plantibacter

species: Plantibacter sp.

full scientific name: Plantibacter sp.


description: domain/bacteria

full scientific name: <I>Subtercola</I> Männistö et al. 2000

genus: Subtercola

species: Subtercola sp.

full scientific name: Subtercola sp.

strain designation: FB 10


description: domain/bacteria

family: Bacteroidaceae

full scientific name: Phocaeicola dorei (Bakir et al. 2006) García-López et al. 2020

genus: Phocaeicola

order: Bacteroidales

species: Phocaeicola dorei

synonym: Bacteroides dorei

description: Phocaeicola dorei strain ClaCZ110 16S ribosomal RNA gene, partial sequence

description: ASM1498296v1 assembly for Phocaeicola dorei DSM 108974


description: domain/bacteria

family: Bacillaceae

full scientific name: <I>Gracilibacillus</I> Wainø et al. 1999

genus: Gracilibacillus

species: Gracilibacillus sp.

full scientific name: Gracilibacillus sp.

description: Gracilibacillus sp. NCCP-170 gene for 16S rRNA, partial sequence.

description: ASM131530v1 assembly for Gracilibacillus sp. JCM 18860


description: domain/bacteria

strain designation: CXB 14


description: domain/bacteria

full scientific name: Paraliobacillus salinarum Yin et al. 2021

genus: Paraliobacillus

species: Paraliobacillus salinarum

description: Paraliobacillus sp. G6-18 16S ribosomal RNA gene, partial sequence

description: ASM1408386v1 assembly for Paraliobacillus salinarum G6-18


description: domain/bacteria

full scientific name: <I>Paraliobacillus</I> Ishikawa et al. 2003

species: Paraliobacillus sp.

full scientific name: Paraliobacillus sp.


description: domain/bacteria

family: Muribaculaceae

full scientific name: Sodaliphilus pleomorphus Wylensek et al. 2021

genus: Sodaliphilus

species: Sodaliphilus pleomorphus

full scientific name: Sodaliphilus pleomorphus

description: Sodaliphilus pleomorphus strain Oil-RF-744-WCA-WT-10 16S ribosomal RNA gene, partial sequence

description: ASM967695v1 assembly for Sodaliphilus pleomorphus Oil-RF-744-WCA-WT-10

description: ASM969656v1 assembly for Sodaliphilus pleomorphus Oil-RF-744-WCA-WT-10


class: Thermococci

description: domain/archaea

family: Thermococcaceae

full scientific name: <I>Pyrococcus</I> Fiala and Stetter 1986

genus: Pyrococcus

order: Thermococcales

phylum: Methanobacteriota

species: Pyrococcus sp.

full scientific name: Pyrococcus sp.

phylum: Euryarchaeota


class: Actinomycetes

description: domain/bacteria

full scientific name: Saccharopolyspora halophila Tang et al. 2009

genus: Saccharopolyspora

species: Saccharopolyspora halophila


description: domain/bacteria

family: Propionibacteriaceae

full scientific name: <I>Microlunatus</I> Nakamura et al. 1995

genus: Microlunatus

order: Propionibacteriales

species: Microlunatus sp.

synonym: Friedmanniella

class: Actinobacteria

full scientific name: Microlunatus sp.


description: domain/bacteria


description: domain/bacteria

family: Oscillospiraceae

full scientific name: <I>Ruminococcus</I> Sijpesteijn 1948 (Approved Lists 1980)

genus: Ruminococcus

order: Eubacteriales

species: Ruminococcus sp.

full scientific name: Ruminococcus sp.

description: Ruminococcus sp. Pei041 16S genomic RNA gene, isolate Pei041


description: domain/bacteria

full scientific name: Ruminococcoides bili Molinero et al. 2021

genus: Ruminococcoides

species: Ruminococcoides bili


description: domain/bacteria

full scientific name: <I>Frigoribacterium</I> Kämpfer et al. 2000

genus: Frigoribacterium

species: Frigoribacterium sp.

full scientific name: Frigoribacterium sp.


description: domain/bacteria

family: Rikenellaceae

full scientific name: Gallalistipes aquisgranensis Zenner et al. 2021

genus: Gallalistipes

species: Gallalistipes aquisgranensis

full scientific name: Gallalistipes aquisgranensis

description: Gallalistipes aquisgranensis strain Cla-CZ-119 16S ribosomal RNA gene, partial sequence

description: ASM1498271v1 assembly for Gallalistipes aquisgranensis DSM 108975


description: domain/bacteria

family: Cellulomonadaceae

full scientific name: <I>Actinotalea</I> Yi et al. 2007

genus: Actinotalea

species: Actinotalea sp.

full scientific name: Actinotalea sp.


description: domain/bacteria

family: Salaquimonadaceae

full scientific name: Salaquimonas pukyongi Kim et al. 2019

genus: Salaquimonas

order: Hyphomicrobiales

species: Salaquimonas pukyongi

family: Phyllobacteriaceae

description: Salaquimonas pukyongi strain RR3-28 16S ribosomal RNA gene, partial sequence

description: ASM195305v1 assembly for Salaquimonas pukyongi RR3-28


description: domain/bacteria

full scientific name: Pseudonocardia abyssalis Parra et al. 2021

genus: Pseudonocardia

species: Pseudonocardia abyssalis

full scientific name: Pseudonocardia abyssalis Parra J, Soldatou S, Rooney LM, Duncan KR, 2021

description: Pseudonocardia abyssalis strain KRD168 16S ribosomal RNA gene, partial sequence

description: ASM1926370v2 assembly for Pseudonocardia abyssalis KRD168


description: domain/bacteria

family: Peptostreptococcaceae

full scientific name: Criibacterium bergeronii Maheux et al. 2021

genus: Criibacterium

order: Peptostreptococcales

species: Criibacterium bergeronii

full scientific name: Criibacterium bergeronii Maheux et al. 2016

description: Criibacterium bergeronii strain CCRI-22567 16S ribosomal RNA gene, partial sequence

description: ASM169377v2 assembly for Criibacterium bergeronii CCRI-22567


class: Culicoidibacteria

description: domain/bacteria

family: Culicoidibacteraceae

full scientific name: Culicoidibacter larvae Neupane et al. 2020

genus: Culicoidibacter

order: Culicoidibacterales

species: Culicoidibacter larvae

description: Culicoidibacter larvae strain CS-1 16S ribosomal RNA gene, partial sequence

description: ASM577163v1 assembly for Culicoidibacter larvae CS-1


class: Cytophagia

description: domain/bacteria

family: Spirosomataceae

full scientific name: Spirosoma endbachense Rojas et al. 2021

genus: Spirosoma

order: Cytophagales

species: Spirosoma endbachense

family: Spirosomaceae

description: ASM1023358v1 assembly for Spirosoma endbachense I-24


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Blautia obeum (Moore et al. 1976) Lawson and Finegold 2015

genus: Blautia

species: Blautia obeum

synonym: Ruminococcus obeum


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium liangguodongii Zhu et al. 2020

genus: Corynebacterium

order: Mycobacteriales

species: Corynebacterium liangguodongii

description: ASM307086v1 assembly for Corynebacterium liangguodongii 2184


description: domain/bacteria

family: Pirellulaceae

full scientific name: Bremerella volcania Rensink et al. 2021

genus: Bremerella

order: Pirellulales

species: Bremerella volcania

full scientific name: Bremerella volcania Rensink et al. 2020

strain designation: Pan 97, Pan97

description: Bremerella volcania 16S ribosomal RNA gene, partial sequence

description: ASM774811v1 assembly for Bremerella volcania Pan97


description: domain/bacteria

family: Eubacteriaceae

full scientific name: Gallibacter intestinalis Zenner et al. 2021

genus: Gallibacter

species: Gallibacter intestinalis

full scientific name: Gallibacter intestinalis

description: Clostridiales bacterium strain ClaCZ54 16S ribosomal RNA gene, partial sequence

description: ASM1498274v1 assembly for Gallibacter intestinalis DSM 108706


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Ligilactobacillus aviarius (Fujisawa et al. 1985) Zheng et al. 2020

genus: Ligilactobacillus

order: Lactobacillales

species: Ligilactobacillus aviarius

synonym: Lactobacillus aviarius

description: Ligilactobacillus aviarius strain ClaCZ67 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Clostridiaceae

full scientific name: Clostridium thermarum Liu et al. 2021

genus: Clostridium

species: Clostridium thermarum

full scientific name: Clostridium thermarum Liu et al. 2020

description: Clostridium thermarum strain SYSU GA15002 16S ribosomal RNA gene, partial sequence

description: ASM635192v1 assembly for Clostridium thermarum SYSU GA15002

description: ASM1036760v1 assembly for Clostridium thermarum SYSU GA15002


description: domain/bacteria

family: Desulfovibrionaceae

full scientific name: Desulfolutivibrio sulfoxidireducens Thiel et al. 2021

genus: Desulfolutivibrio

order: Desulfovibrionales

species: Desulfolutivibrio sulfoxidireducens

class: Deltaproteobacteria

full scientific name: Desulfolutivibrio sulfoxidireducens Thiel et al. 2020

description: Desulfolutivibrio sulfoxidireducens strain DSM 106783 16S ribosomal RNA gene, partial sequence

description: ASM1337649v1 assembly for Desulfolutivibrio sulfoxidireducens DSM 106783


description: domain/bacteria

description: Desulfolutivibrio sulfoxidireducens strain DSM 107105 16S ribosomal RNA gene, partial sequence

description: ASM1337647v1 assembly for Desulfolutivibrio sulfoxidireducens DSM 107105


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Paenibacillus dendritiformis Tcherpakov et al. 1999

genus: Paenibacillus

order: Caryophanales

species: Paenibacillus dendritiformis

description: Paenibacillus dendritiformis strain ClaCZ203 16S ribosomal RNA gene, partial sequence


class: Gammaproteobacteria

description: domain/bacteria

family: Halomonadaceae

full scientific name: Halomonas sedimenti Qiu et al. 2024

genus: Halomonas

order: Oceanospirillales

species: Halomonas sedimenti

synonym: Vreelandella sedimenti

full scientific name: Halomonas sedimenti Qiu et al. 2021

description: Halomonas sedimenti strain QX-2 16S ribosomal RNA gene, partial sequence

description: ASM1341632v1 assembly for Vreelandella sedimenti QX-2


description: domain/bacteria

family: Dermacoccaceae

full scientific name: Leekyejoonella antrihumi Lee et al. 2020

genus: Leekyejoonella

order: Micrococcales

species: Leekyejoonella antrihumi

description: Dermacoccaceae bacterium C5-26 partial 16S rRNA gene, strain C5-26

description: ASM784564v1 assembly for Leekyejoonella antrihumi C5-26


culture collection no.: DSM 102091, Marseille-P2384

description: domain/bacteria

family: Bacillaceae

full scientific name: Bacillus mediterraneensis Cadoret et al. 2017

genus: Bacillus

species: Bacillus mediterraneensis

synonym: Bacillus mediterraneensis


description: domain/bacteria

family: Planctomycetaceae

full scientific name: Gimesia alba Wiegand et al. 2021

genus: Gimesia

order: Planctomycetales

species: Gimesia alba

full scientific name: Gimesia alba

strain designation: Pan241weiss, Pan241w

description: Gimesia alba strain Pan241w 16S ribosomal RNA gene, partial sequence

description: ASM774467v1 assembly for Gimesia alba Pan241w


description: domain/bacteria

family: Rikenellaceae

full scientific name: Alistipes onderdonkii Song et al. 2006

genus: Alistipes

species: Alistipes onderdonkii

description: Alistipes onderdonkii strain ClaCZ125 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Bacillus salis Seck et al. 2023

species: Bacillus salis

full scientific name: Bacillus salis Seck et al. 2018

description: Bacillus sp. ES3(2015) partial 16S rRNA gene, strain ES3


description: domain/bacteria

full scientific name: Ligilactobacillus salivarius (Rogosa et al. 1953) Zheng et al. 2020

species: Ligilactobacillus salivarius

synonym: Lactobacillus salivarius

synonym: Lactobacillus salivarius subsp. salicinius

description: Ligilactobacillus salivarius strain ClaCZ11 16S ribosomal RNA gene, partial sequence

description: ASM1498291v1 assembly for Ligilactobacillus salivarius DSM 108969


family: Rhizobiaceae

full scientific name: Rhizobiaceae not further classified

genus: Rhizobiaceae

order: Not assigned to order

species: Rhizobiaceae not further classified


description: domain/bacteria

family: Micromonosporaceae

full scientific name: Micromonospora saelicesensis Trujillo et al. 2007

genus: Micromonospora

order: Micromonosporales

species: Micromonospora saelicesensis


description: domain/bacteria

family: Sporolactobacillaceae

full scientific name: <I>Scopulibacillus</I> Lee and Lee 2015

genus: Scopulibacillus

species: Scopulibacillus sp.

full scientific name: Scopulibacillus sp.


class: Negativicutes

description: domain/bacteria

family: Selenomonadaceae

full scientific name: Megamonas funiformis Sakon et al. 2008

genus: Megamonas

order: Selenomonadales

species: Megamonas funiformis

description: Megamonas funiformis strain ClaCZ129 16S ribosomal RNA gene, partial sequence

description: ASM1498287v1 assembly for Megamonas funiformis DSM 110965


description: domain/bacteria

full scientific name: Bacillus solitudinis Liu et al. 2019

species: Bacillus solitudinis

description: Bacillus alkalisoli strain FJAT-45122 16S ribosomal RNA gene, partial sequence


culture collection no.: DSM 103120, Marseille-P2653

description: domain/bacteria

family: Bacteroidaceae

full scientific name: Bacteroides bouchesdurhonensis Ndongo et al. 2019

genus: Bacteroides

order: Bacteroidales

species: Bacteroides bouchesdurhonensis

description: Bacteroides sp. Marseille-P2653 partial 16S rRNA gene, strain Marseille-P2653

description: PRJEB18812 assembly for Bacteroides bouchesdurhonensis Marseille-P2653


description: domain/bacteria

family: Caryophanaceae

full scientific name: <I>Jeotgalibacillus</I> Yoon et al. 2001

genus: Jeotgalibacillus

species: Jeotgalibacillus sp.

synonym: Marinibacillus

full scientific name: Jeotgalibacillus sp.

description: Jeotgalibacillus sp. SCSIO 04151 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

full scientific name: <I>Pontibacillus</I> Lim et al. 2005

genus: Pontibacillus

species: Pontibacillus sp.

full scientific name: Pontibacillus sp.

description: Pontibacillus sp. BH87004 16S ribosomal RNA gene, partial sequence


description: domain/bacteria


description: domain/bacteria

full scientific name: Oceanobacillus jeddahense Khelaifia et al. 2016

genus: Oceanobacillus

species: Oceanobacillus jeddahense

description: PRJEB5524_assembly_1 assembly for Oceanobacillus jeddahense S5


description: domain/bacteria

full scientific name: Paenibacillus tyrphae corrig. Aw et al. 2025

species: Paenibacillus tyrphae

synonym: Paenibacillus tyrfis

full scientific name: Paenibacillus tyrphae Aw et al. 2025

description: Paenibacillus tyrfis strain MSt1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Planococcus dechangensis Wang et al. 2026

genus: Planococcus

species: Planococcus dechangensis

full scientific name: Planococcus dechangensis Wang et al. 2015

description: Planococcus dechangensis strain NEAU-ST10-9 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Micromonospora tulbaghiae Kirby and Meyers 2010

species: Micromonospora tulbaghiae


description: domain/bacteria

full scientific name: Gimesia panareensis Wiegand et al. 2021

species: Gimesia panareensis

full scientific name:
Gimesia panareensis Wiegand et al. 2020
Oren and Garrity 2021

strain designation: Enrichment 10, Enr10

description: Gimesia panareensis strain Enr10 16S ribosomal RNA gene, partial sequence

description: ASM774815v1 assembly for Gimesia panareensis Enr10


description: domain/bacteria

family: Micrococcaceae

full scientific name: Kocuria tytonicola Braun et al. 2019

genus: Kocuria

species: Kocuria tytonicola

description: Kocuria tytonicola strain 473 16S ribosomal RNA gene, partial sequence

description: ASM368717v1 assembly for Kocuria tytonicola 473


description: domain/bacteria

description: Kocuria tytonicola strain 489 16S ribosomal RNA gene, partial sequence

description: ASM368745v1 assembly for Kocuria tytonicola DSM 104133


class: Betaproteobacteria

description: domain/bacteria

family: Comamonadaceae

full scientific name: Variovorax boronicumulans Miwa et al. 2008

genus: Variovorax

order: Burkholderiales

species: Variovorax boronicumulans

description: ASM230395v1 assembly for Variovorax boronicumulans ACN3


Matching level: strain

class: Alphaproteobacteria

description: domain/bacteria

full scientific name: Rhizobium selenitireducens corrig. Hunter et al. 2008

genus: Rhizobium

order: Hyphomicrobiales

species: Rhizobium selenitireducens

synonym: Paenirhizobium selenitireducens

synonym: Rhizobium selenireducens

synonym: Ciceribacter selenitireducens

full scientific name: Rhizobium selenitireducens Hunter et al. 2008

description: Rhizobium selenitireducens strain B1 16S ribosomal RNA gene, partial sequence

description: Rhizobium selenitireducens genes for 16S rRNA, 16S-23S rRNA intergenic spacer, 23S rRNA, partial and complete sequence, strain: LMG 24075.

description: Ciceribacter selenitireducens 16S ribosomal RNA gene, partial sequence.

description: ASM51878v1 assembly for Ciceribacter selenitireducens ATCC BAA-1503


description: domain/bacteria

family: Veillonellaceae

full scientific name: Veillonella magna Kraatz and Taras 2008

genus: Veillonella

order: Veillonellales

species: Veillonella magna

description: Veillonella magna strain ClaCZ101 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Thermomonosporaceae

full scientific name: Actinomadura miaoliensis Tseng et al. 2009

genus: Actinomadura

order: Streptosporangiales

species: Actinomadura miaoliensis


description: domain/bacteria

full scientific name: Rummeliibacillus stabekisii Vaishampayan et al. 2009

genus: Rummeliibacillus

species: Rummeliibacillus stabekisii


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces mayteni Chen et al. 2009

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces mayteni

order: Streptomycetales

description: Streptomyces mayteni strain YIM 60475 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Jiangellaceae

full scientific name: <I>Jiangella</I> Song et al. 2005

genus: Jiangella

order: Jiangellales

species: Jiangella sp.

full scientific name: Jiangella sp.


description: domain/bacteria

family: Propionibacteriaceae

full scientific name: Friedmanniella luteola Iwai et al. 2010

genus: Friedmanniella

order: Propionibacteriales

species: Friedmanniella luteola

synonym: Microlunatus luteolus


description: domain/bacteria

full scientific name: <I>Rothia</I> Georg and Brown 1967 (Approved Lists 1980)

genus: Rothia

species: Rothia sp.

synonym: Stomatococcus

full scientific name: Rothia sp.


description: domain/bacteria

full scientific name: <I>Lysinibacillus</I> Ahmed et al. 2007

genus: Lysinibacillus

species: Lysinibacillus sp.

full scientific name: Lysinibacillus sp.


description: domain/bacteria

description: ASM148248v1 assembly for Lysinibacillus sp. F5


description: domain/bacteria

family: Nocardiaceae

full scientific name: Antrihabitans stalactiti Lee et al. 2020

genus: Antrihabitans

order: Mycobacteriales

species: Antrihabitans stalactiti

full scientific name: Antrihabitans stalactiti

description: Antrihabitans stalactiti strain YC2-7 16S ribosomal RNA gene, partial sequence

description: ASM1293291v1 assembly for Antrihabitans stalactiti YC2-7


description: domain/bacteria

family: Alicyclobacillaceae

full scientific name: Alicyclobacillus mali Roth et al. 2021

genus: Alicyclobacillus

order: Caryophanales

species: Alicyclobacillus mali


description: domain/bacteria

full scientific name: Alicyclobacillus suci Roth et al. 2021

species: Alicyclobacillus suci

description: ASM1732961v1 assembly for Alicyclobacillus suci VF-FSL-W10-0049


class: Coriobacteriia

description: domain/bacteria

family: Coriobacteriaceae

full scientific name: Collinsella tanakaei Nagai et al. 2010

genus: Collinsella

order: Coriobacteriales

species: Collinsella tanakaei

description: Collinsella tanakaei gene for 16S rRNA, partial sequence, strain: YIT 12064

description: Collinsella tanakaei gene for 16S ribosomal RNA, partial sequence, strain: JCM 16103


class: Bacilli

description: domain/bacteria

family: Thermoactinomycetaceae

full scientific name: <I>Desmospora</I> Yassin et al. 2009

genus: Desmospora

species: Desmospora sp.

full scientific name: Desmospora sp.


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Paenibacillus pini Kim et al. 2011

genus: Paenibacillus

species: Paenibacillus pini

description: Paenibacillus pini strain S22 16S ribosomal RNA gene, partial sequence

description: ASM57630v1 assembly for Paenibacillus pini JCM 16418

description: ASM131512v1 assembly for Paenibacillus pini JCM 16418

description: Paenibacillus pini JCM 16418


description: domain/bacteria

full scientific name: Streptomyces malaysiensis subsp. samsunensis (Sazak et al. 2011) Komaki 2025

synonym: Streptomyces samsunensis

full scientific name: Streptomyces samsunensis Sazak et al. 2011

species: Streptomyces samsunensis


description: domain/bacteria

full scientific name: Streptomyces sanyensis Sui et al. 2011

species: Streptomyces sanyensis

description: Streptomyces sp. 219808 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Bacillaceae

full scientific name: Halalkalibacter alkalisediminis (Borsodi et al. 2011) Joshi et al. 2022

genus: Halalkalibacter

species: Halalkalibacter alkalisediminis

synonym: Alkalihalobacillus alkalisediminis

synonym: Bacillus alkalisediminis

description: Bacillus alkalisediminis partial 16S rRNA gene, strain H3-93


class: Epsilonproteobacteria

description: domain/bacteria

family: Arcobacteraceae

full scientific name: Arcobacter ellisii Figueras et al. 2011

genus: Arcobacter

order: Campylobacterales

species: Arcobacter ellisii

synonym: Pseudarcobacter ellisii

synonym: Pseudoarcobacter ellisii

description: Arcobacter sp. F79-6 partial 16S rRNA gene, type strain F79-6T

description: Arcobacter ellisii strain LMG 26155 16S ribosomal RNA gene, partial sequence.

description: ASM354491v1 assembly for Arcobacter ellisii LMG 26155

description: ASM411581v1 assembly for Arcobacter ellisii CECT 7837


description: domain/bacteria

family: Carnobacteriaceae

full scientific name: Alkalibacterium subtropicum Ishikawa et al. 2011

genus: Alkalibacterium

order: Lactobacillales

species: Alkalibacterium subtropicum


description: domain/bacteria

full scientific name: <I>Cohnella</I> Kämpfer et al. 2006

genus: Cohnella

species: Cohnella sp.

full scientific name: Cohnella sp.


description: domain/bacteria

full scientific name: Lysinibacillus macroides (ex Bennett and Canale-Parola 1965) Coorevits et al. 2012

species: Lysinibacillus macroides

strain designation: WS 26

description: Lysinibacillus macroides strain WS26 16S ribosomal RNA gene, partial sequence


class: Thermotogae

description: domain/bacteria

family: Kosmotogaceae

full scientific name: Mesotoga prima Nesbø et al. 2013

genus: Mesotoga

keyword: phylum/thermotogota

order: Kosmotogales

phylum: Thermotogota

species: Mesotoga prima

phylum: Thermotogae

strain designation: Phosphoac3, PhosAc3

description: Thermotogales bacterium PhosAc3 partial 16S rRNA gene, isolate PhosAc3, copy 1


description: domain/bacteria

family: Nocardiopsidaceae

full scientific name: Nocardiopsis terrae Chen et al. 2012

genus: Nocardiopsis

species: Nocardiopsis terrae

family: Nocardiopsaceae


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: Halosaccharopolyspora lacisalsi (Guan et al. 2013) Teo et al. 2021

genus: Halosaccharopolyspora

order: Pseudonocardiales

species: Halosaccharopolyspora lacisalsi

synonym: Saccharopolyspora lacisalsi

full scientific name: Saccharopolyspora lacisalsi Guan et al. 2013

genus: Saccharopolyspora

species: Saccharopolyspora lacisalsi


description: domain/bacteria

full scientific name: Geomicrobium sediminis Xiong et al. 2014

genus: Geomicrobium

species: Geomicrobium sediminis


description: domain/bacteria

genus: Actinopolyspora

species: Actinopolyspora saharensis

family: Actinopolysporaceae

full scientific name: Actinopolyspora saharensis Meklat et al. 2013 emend. Nouioui et al. 2018

order: Actinopolysporales


class: Bacteroidia

description: domain/bacteria

family: Dysgonomonadaceae

full scientific name: <I>Dysgonomonas</I> Hofstad et al. 2000

genus: Dysgonomonas

order: Bacteroidales

species: Dysgonomonas sp.

synonym: Indolivaga

full scientific name: Dysgonomonas sp.


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces wuyuanensis Zhang et al. 2013

genus: Streptomyces

species: Streptomyces wuyuanensis


description: domain/bacteria

family: Roseobacteraceae

full scientific name: Roseovarius litorisediminis (Park et al. 2013) Hördt et al. 2020

genus: Roseovarius

order: Rhodobacterales

species: Roseovarius litorisediminis

synonym: Pelagicola litorisediminis

family: Rhodobacteraceae

description: Pelagicola litorisediminis strain D1-W8 16S ribosomal RNA gene, partial sequence

description: P.litorisediminis_CECT8287_Spades_Prokka assembly for Roseovarius litorisediminis CECT 8287


description: domain/bacteria

family: Micromonosporaceae

full scientific name: Micromonospora schwarzwaldensis Vela Gurovic et al. 2013

genus: Micromonospora

order: Micromonosporales

species: Micromonospora schwarzwaldensis


description: domain/bacteria

full scientific name: Hazenella coriacea Buss et al. 2013

genus: Hazenella

species: Hazenella coriacea

description: Hazenella coriacea strain 1335 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Pseudooctadecabacter jejudonensis (Park and Yoon 2014) Billerbeck et al. 2015

genus: Pseudooctadecabacter

species: Pseudooctadecabacter jejudonensis

synonym: Octadecabacter jejudonensis

description: Pseudooctadecabacter jejudonensis strain SSK2-1 from South Korea 16S ribosomal RNA gene, partial sequence

description: P.jejudonensis_CECT8397_Spades_Prokka assembly for Pseudooctadecabacter jejudonensis CECT 8397


description: domain/archaea

family: Thermococcaceae

full scientific name: Thermococcus nautili Gorlas et al. 2022

genus: Thermococcus

order: Thermococcales

species: Thermococcus nautili

full scientific name: Thermococcus nautili Gorlas et al. 2014

description: Thermococcus nautili strain 30-1 16S ribosomal RNA gene, partial sequence

description: Thermococcus nautili strain 30-1 16S ribosomal RNA, complete sequence

description: ASM58549v1 assembly for Thermococcus nautili 30-1


description: domain/bacteria

full scientific name: Puniceibacterium antarcticum Liu et al. 2014

genus: Puniceibacterium

species: Puniceibacterium antarcticum

description: ASM276061v1 assembly for Puniceibacterium antarcticum SM1211


description: domain/bacteria

family: Helicobacteraceae

full scientific name: Helicobacter valdiviensis Collado et al. 2014

genus: Helicobacter

species: Helicobacter valdiviensis

description: Helicobacter valdiviensis strain WBE14 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Streptosporangiaceae

full scientific name: Sinosporangium siamense Suriyachadkun et al. 2014

genus: Sinosporangium

order: Streptosporangiales

species: Sinosporangium siamense

description: Sinosporangium siamense strain A-T 1946 16S ribosomal RNA gene, partial sequence

description: ASM1686343v1 assembly for Sinosporangium siamense NBRC 109515


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Paenibacillus selenii Xiang et al. 2014

genus: Paenibacillus

species: Paenibacillus selenii

description: Paenibacillus selenii strain W126 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Limimaricola variabilis (Park et al. 2014) Wirth and Whitman 2018

genus: Limimaricola

species: Limimaricola variabilis

synonym: Loktanella variabilis

description: Loktanella variabilis strain J-MR2-Y 16S ribosomal RNA gene, partial sequence

description: ASM1419554v1 assembly for Limimaricola variabilis CECT 8572


description: domain/bacteria

full scientific name: Pseudooceanicola algae Wolter et al. 2021

genus: Pseudooceanicola

species: Pseudooceanicola algae

full scientific name: Pseudooceanicola algae

description: ASM359014v2 assembly for Pseudooceanicola algae Lw-13e


description: domain/bacteria

full scientific name: Boseongicola aestuarii Park et al. 2014

genus: Boseongicola

species: Boseongicola aestuarii

description: Boseongicola aestuarii strain BS-W15 16S ribosomal RNA gene, partial sequence

description: B.aestuarii_CECT8489_Spades_Prokka assembly for Boseongicola aestuarii CECT 8489


description: domain/bacteria

family: Coriobacteriaceae

full scientific name: Collinsella massiliensis Padmanabhan et al. 2016

genus: Collinsella

species: Collinsella massiliensis

description: [Collinsella] massiliensis strain ClaCZ158 16S ribosomal RNA gene, partial sequence


class: Saprospiria

description: domain/bacteria

family: Lewinellaceae

full scientific name: Portibacter lacus Yoon et al. 2014

genus: Portibacter

order: Saprospirales

species: Portibacter lacus

description: ASM2153321v1 assembly for Portibacter lacus YM8-076

description: ASM3016041v1 assembly for Portibacter lacus NBRC 108769


description: domain/bacteria

full scientific name: Streptomyces panaciradicis Lee et al. 2014

order: Kitasatosporales

species: Streptomyces panaciradicis

order: Streptomycetales

description: Streptomyces panaciradicis strain 1MR-8 16S ribosomal RNA gene, partial sequence

description: ASM2351661v1 assembly for Streptomyces panaciradicis NBRC 109811


description: domain/bacteria

family: Nocardiaceae

full scientific name: Nocardia vulneris Lasker et al. 2015

genus: Nocardia

species: Nocardia vulneris


description: domain/bacteria

family: Promicromonosporaceae

full scientific name: Cellulosimicrobium composti Hu et al. 2021

genus: Cellulosimicrobium

order: Micrococcales

species: Cellulosimicrobium composti

synonym: Cellulosimicrobium fucosivorans

description: ASM1028790v1 assembly for Cellulosimicrobium composti SE3


description: domain/bacteria

full scientific name: Paenibacillus swuensis Lee et al. 2015

species: Paenibacillus swuensis

description: Paenibacillus swuensis strain DY6 16S ribosomal RNA gene, partial sequence

description: ASM164460v1 assembly for Paenibacillus swuensis DY6


description: domain/bacteria

full scientific name: Nonomuraea syzygii Rachniyom et al. 2015

genus: Nonomuraea

species: Nonomuraea syzygii

description: Nonomuraea syzygii strain GKU 164 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Streptomyces albiflavescens Han et al. 2015

genus: Streptomyces

species: Streptomyces albiflavescens

description: ASM1464583v1 assembly for Streptomyces albiflavescens CGMCC 4.7111


class: Chlamydiia

description: domain/bacteria

family: Chlamydiaceae

full scientific name: Chlamydia gallinacea Sachse et al. 2015

genus: Chlamydia

keyword: phylum/chlamydiota

order: Chlamydiales

phylum: Chlamydiota

species: Chlamydia gallinacea

phylum: Chlamydiae

description: Chlamydia gallinacea 08-1274/3 16S ribosomal RNA gene, partial sequence

description: ASM47102v2 assembly for Chlamydia gallinacea 08-1274/3

description: Chlamydia gallinacea 08-1274/3


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lactobacillus bombicola Praet et al. 2015

genus: Lactobacillus

phylum: Bacillota

species: Lactobacillus bombicola

phylum: Firmicutes


description: domain/bacteria

family: Nocardiopsidaceae

full scientific name: Streptomonospora nanhaiensis Zhang et al. 2013

genus: Streptomonospora

species: Streptomonospora nanhaiensis

synonym: Streptomonospora halotolerans

family: Nocardiopsaceae

full scientific name: Streptomonospora halotolerans Zhao et al. 2015

species: Streptomonospora halotolerans

description: Streptomonospora nanhaiensis strain NEAU-Jh2-17 16S ribosomal RNA gene, partial sequence

description: ASM1973327v1 assembly for Streptomonospora nanhaiensis NEAU-Jh2-17

description: ASM4264800v1 assembly for Streptomonospora nanhaiensis CGMCC 4.7218

description: ASM4265890v1 assembly for Streptomonospora nanhaiensis JCM 30347


description: domain/bacteria

family: Rhizobiaceae

full scientific name: <I>Ensifer</I> Casida 1982

genus: Ensifer

order: Hyphomicrobiales

species: Ensifer sp.

synonym: Sinorhizobium

full scientific name: Ensifer sp.


description: domain/bacteria

family: Caryophanaceae

full scientific name: Savagea faecisuis Whitehead et al. 2015

genus: Savagea

order: Caryophanales

species: Savagea faecisuis


description: domain/bacteria

family: Cytobacillaceae

full scientific name: Cytobacillus solani (Liu et al. 2015) Patel and Gupta 2020

genus: Cytobacillus

species: Cytobacillus solani

synonym: Bacillus ciccensis

synonym: Cytobacillus ciccensis

synonym: Bacillus solani

family: Bacillaceae

description: Cytobacillus solani strain FJAT-18043 16S ribosomal RNA gene, partial sequence

description: ASM142059v1 assembly for Cytobacillus solani FJAT-18043


description: domain/bacteria

full scientific name: Lysinibacillus louembei Ouoba et al. 2015

genus: Lysinibacillus

species: Lysinibacillus louembei

synonym: Metasolibacillus louembei

description: Lysinibacillus louembei partial 16S rRNA gene, type strain NM73T


description: domain/bacteria

family: Micromonosporaceae

full scientific name: Plantactinospora sonchi Ma et al. 2015

genus: Plantactinospora

species: Plantactinospora sonchi

description: Plantactinospora sonchi strain NEAU-QY2 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Microbacteriaceae

full scientific name: <I>Agromyces</I> Gledhill and Casida 1969 (Approved Lists 1980)

genus: Agromyces

species: Agromyces sp.

full scientific name: Agromyces sp.


description: domain/bacteria

family: Erythrobacteraceae

full scientific name: <I>Altererythrobacter</I> Kwon et al. 2007

genus: Altererythrobacter

order: Sphingomonadales

species: Altererythrobacter sp.

synonym: Aestuarierythrobacter

full scientific name: Altererythrobacter sp.


description: domain/bacteria

full scientific name: <I>Oerskovia</I> Prauser et al. 1970 (Approved Lists 1980)

genus: Oerskovia

species: Oerskovia sp.

full scientific name: Oerskovia sp.

description: Oerskovia sp. SB3 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Nakamurellaceae

full scientific name: <I>Nakamurella</I> Tao et al. 2004

genus: Nakamurella

order: Nakamurellales

species: Nakamurella sp.

synonym: Saxeibacter

synonym: Humicoccus

synonym: Microsphaera

full scientific name: Nakamurella sp.


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces bambusae Nguyen and Kim 2016

species: Streptomyces bambusae

description: Streptomyces bambusae strain T110 16S ribosomal RNA gene, partial sequence

description: ASM2053264v1 assembly for Streptomyces bambusae T110


description: domain/bacteria

full scientific name: Streptomyces siamensis Sripreechasak et al. 2016

species: Streptomyces siamensis

description: Streptomyces siamensis gene for 16S ribosomal RNA, partial sequence, strain: KC-038

description: ASM3954360v1 assembly for Streptomyces siamensis JCM 18409


class: Clostridia

description: domain/bacteria

family: Lachnospiraceae

full scientific name: <I>Roseburia</I> Stanton and Savage 1983

genus: Roseburia

order: Eubacteriales

species: Roseburia sp.

full scientific name: Roseburia sp.


class: Actinomycetes

description: domain/bacteria

family: Nocardioidaceae

full scientific name: Nocardioides massiliensis Dubourg et al. 2016

genus: Nocardioides

order: Propionibacteriales

species: Nocardioides massiliensis


description: domain/bacteria

full scientific name: Catellatospora vulcania Jia et al. 2016

genus: Catellatospora

species: Catellatospora vulcania

class: Actinobacteria

description: Catellatospora vulcania strain NEAU-JM1 16S ribosomal RNA gene, partial sequence

description: ASM972038v1 assembly for Catellatospora vulcania NEAU-JM1


description: domain/bacteria

family: Eubacteriales, not assigned to family

full scientific name: Kallipyga massiliensis Hugon et al. 2016

genus: Kallipyga

species: Kallipyga massiliensis

description: Kallipyga massiliensis ph2 16S ribosomal RNA gene, partial sequence

description: ASM31198v1 assembly for Kallipyga massiliensis ph2


description: domain/bacteria

family: Eggerthellaceae

full scientific name: Hugonella massiliensis Elsawi et al. 2017

genus: Hugonella

order: Eggerthellales

species: Hugonella massiliensis

description: Eggerthellaceae bacterium AT8 partial 16S rRNA gene, strain AT8

description: Hugonella massiliensis assembly for Hugonella massiliensis AT8


class: Flavobacteriia

description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Lutibacter oceani Sundararaman and Lee 2017

genus: Lutibacter

order: Flavobacteriales

species: Lutibacter oceani

description: Lutibacter oceani strain 325-5 16S ribosomal RNA gene, partial sequence

description: ASM342687v1 assembly for Lutibacter oceani JCM30924

description: ASM338493v1 assembly for Lutibacter oceani 325-5


description: domain/bacteria

full scientific name: Alkalicoccus halolimnae Zhao et al. 2017

genus: Alkalicoccus

species: Alkalicoccus halolimnae


description: domain/bacteria

full scientific name: Faecalimonas umbilicata Sakamoto et al. 2017

genus: Faecalimonas

species: Faecalimonas umbilicata


description: domain/bacteria

full scientific name: <I>Marinactinospora</I> Tian et al. 2009

genus: Marinactinospora

species: Marinactinospora sp.

full scientific name: Marinactinospora sp.


description: domain/bacteria

full scientific name: Coprococcus phoceensis Bonnet et al. 2025

genus: Coprococcus

species: Coprococcus phoceensis


description: domain/bacteria

family: Dermabacteraceae

full scientific name: Brachybacterium massiliense Mekhalif et al. 2019

genus: Brachybacterium

species: Brachybacterium massiliense

synonym: Brachybacterium massiliense

full scientific name: Brachybacterium massiliense Tidjani Alou et al. 2017

description: PRJEB13137 assembly for Brachybacterium massiliense mt5


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: <I>Goodfellowiella</I> Labeda et al. 2008

genus: Goodfellowiella

order: Pseudonocardiales

species: Goodfellowiella sp.

synonym: Goodfellowia

full scientific name: Goodfellowiella sp.


description: domain/bacteria

family: Listeriaceae

full scientific name: <I>Listeria</I> Pirie 1940 (Approved Lists 1980)

genus: Listeria

species: Listeria sp.

synonym: Murraya

synonym: Mesolisteria

synonym: Paenilisteria

full scientific name: Listeria sp.

description: Listeria valentina strain CLIP 2019/00570 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Listeria valentina Quereda et al. 2020

species: Listeria valentina

synonym: Mesolisteria valentina

strain designation: LISVAL112, LISVAL 112

description: Listeria valentina strain CLIP 2019/00574 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: <I>Ornithinibacillus</I> Mayr et al. 2006

genus: Ornithinibacillus

species: Ornithinibacillus sp.

full scientific name: Ornithinibacillus sp.

description: Ornithinibacillus sp. SCSIO 04143 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Micrococcaceae

full scientific name: <I>Zhihengliuella</I> Zhang et al. 2007

genus: Zhihengliuella

species: Zhihengliuella sp.

full scientific name: Zhihengliuella sp.


description: domain/bacteria

family: Caryophanaceae

full scientific name: <I>Planococcus</I> Migula 1894 (Approved Lists 1980)

genus: Planococcus

species: Planococcus sp.

synonym: Planomicrobium

full scientific name: Planococcus sp.

description: Planococcus sp. DLS-81 partial 16S rRNA gene, strain DLS-81


description: domain/bacteria

full scientific name: <I>Mycetocola</I> Tsukamoto et al. 2001

genus: Mycetocola

species: Mycetocola sp.

full scientific name: Mycetocola sp.

description: Actinobacterium A7 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Mycetocola sp. CPCC 203514 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Streptosporangiaceae

full scientific name: <I>Thermopolyspora</I> (ex Krassilnikov and Agre 1964) Goodfellow et al. 2005

genus: Thermopolyspora

species: Thermopolyspora sp.

full scientific name: Thermopolyspora sp.

description: Thermopolyspora sp. YIM 75076 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Geodermatophilaceae

full scientific name: Klenkia marina Montero-Calasanz et al. 2018

genus: Klenkia

order: Geodermatophilales

species: Klenkia marina

description: Klenkia marina partial 16S rRNA gene, strain YIM M13156, DSM 45722

description: IMG-taxon 2602042045 annotated assembly for Klenkia marina DSM 45722


description: domain/bacteria

full scientific name: Rubneribacter badeniensis Danylec et al. 2018

genus: Rubneribacter

species: Rubneribacter badeniensis

description: Coriobacteriaceae bacterium strain ClaCZ151 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Methylophilaceae

full scientific name: Novimethylophilus kurashikiensis Lv et al. 2018

genus: Novimethylophilus

order: Spirillales

species: Novimethylophilus kurashikiensis

order: Nitrosomonadales

description: ASM311243v1 assembly for Novimethylophilus kurashikiensis La2-4


culture collection no.: DSM 103637, Marseille-P3166

description: domain/bacteria

family: Bacteroidaceae

full scientific name: Bacteroides togonis Andrieu et al. 2018

genus: Bacteroides

order: Bacteroidales

species: Bacteroides togonis

description: Bacteroides sp. Marseille-P3166 partial 16S rRNA gene, strain Marseille-P3166

description: PRJEB18269 assembly for Bacteroides togonis Marseille-P3166


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Cohnella massiliensis Abou Abdallah et al. 2019

genus: Cohnella

species: Cohnella massiliensis

description: Cohnella sp. 6021052837 partial 16S rRNA gene, strain 6021052837

description: PRJEB19972 assembly for Cohnella massiliensis 6021052837


culture collection no.: DSM 103304, Marseille-P2911

description: domain/bacteria

family: Veillonellaceae

full scientific name: Megasphaera coli Heng et al. 2025

genus: Megasphaera

order: Veillonellales

species: Megasphaera coli

synonym: Colibacter massiliensis

full scientific name: Colibacter massiliensis Mailhe et al. 2017

genus: Colibacter

species: Colibacter massiliensis

description: Colibacter massiliensis partial 16S rRNA gene, type strain Marseille-P2911T

description: PRJEB15308 assembly for Colibacter massiliensis Marseille-P2911


description: domain/bacteria

family: Coriobacteriaceae

full scientific name: Collinsella aerofaciens subsp. shenzhenensis Qin et al. 2019

genus: Collinsella

order: Coriobacteriales

description: Collinsella sp. strain TF06-26 16S ribosomal RNA gene, partial sequence


class: Deinococci

description: domain/bacteria

family: Deinococcaceae

full scientific name: Deinococcus populi Li et al. 2018

genus: Deinococcus

order: Deinococcales

phylum: Deinococcota

species: Deinococcus populi

phylum: Deinococcus-Thermus

description: Deinococcus populi gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

family: Propionibacteriaceae

full scientific name: Desertihabitans aurantiacus Sun et al. 2019

genus: Desertihabitans

species: Desertihabitans aurantiacus

description: Desertihabitans aurantiacus strain CPCC 204711 16S ribosomal RNA gene, partial sequence

description: ASM334463v1 assembly for Desertihabitans aurantiacus CPCC 204711


description: domain/bacteria

family: Muribaculaceae

full scientific name: Duncaniella dubosii Miyake et al. 2020

genus: Duncaniella

phylum: Bacteroidota

species: Duncaniella dubosii

phylum: Bacteroidetes

description: Duncaniella dubosii 16S ribosomal RNA gene, partial sequence

description: ASM480391v1 assembly for Duncaniella dubosii H5


description: domain/bacteria

full scientific name: Duncaniella freteri Miyake et al. 2020

species: Duncaniella freteri

strain designation: 25E, TLL-A3

description: Duncaniella freteri 16S ribosomal RNA gene, partial sequence

description: ASM476612v1 assembly for Duncaniella freteri TLL-A3


culture collection no.: DSM 103942, Marseille P3109

description: domain/bacteria

family: Actinomycetaceae

full scientific name: Actinomyces oralis Fonkou et al. 2018

genus: Actinomyces

order: Actinomycetales

phylum: Actinomycetota

species: Actinomyces oralis

synonym: Actinomyces oralis


description: domain/bacteria

full scientific name: <I>Actinokineospora</I> Hasegawa 1988

genus: Actinokineospora

species: Actinokineospora sp.

synonym: Alloactinosynnema

full scientific name: Actinokineospora sp.

phylum: Actinobacteria


description: domain/bacteria

family: Aestuariivirgaceae

full scientific name: Aestuariivirga litoralis Li et al. 2019

genus: Aestuariivirga

order: Hyphomicrobiales

species: Aestuariivirga litoralis

description: Aestuariivirga litoralis strain SYSU M10001 16S ribosomal RNA gene, partial sequence

description: ASM323496v1 assembly for Aestuariivirga litoralis KCTC 52945


description: domain/bacteria

family: Psittacicellaceae

full scientific name: Psittacicella hinzii Xin et al. 2019

genus: Psittacicella

order: Pasteurellales

species: Psittacicella hinzii

description: Psittacicella hinzii 16S ribosomal RNA gene, partial sequence

description: ASM358593v1 assembly for Psittacicella hinzii 111

description: ASM4265964v1 assembly for Psittacicella hinzii CCM 8842


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces griseus subsp. griseus (Krainsky 1914) Pridham 1970 (Approved Lists 1980)

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces griseus subsp. griseus

order: Streptomycetales


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus durrellii Fountain et al. 2021

genus: Staphylococcus

order: Caryophanales

species: Staphylococcus durrellii

description: ASM1559454v1 assembly for Staphylococcus durrellii 27_4_6_LY


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: Alloactinosynnema sp.

genus: Alloactinosynnema

species: Alloactinosynnema sp.

description: Alloactinosynnema sp. CNBC1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Alloactinosynnema sp. CNBC2 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Thermoactinomycetaceae

full scientific name: <I>Melghirimyces</I> Addou et al. 2012

genus: Melghirimyces

species: Melghirimyces sp.

full scientific name: Melghirimyces sp.


description: domain/bacteria

full scientific name: <I>Kroppenstedtia</I> von Jan et al. 2011

genus: Kroppenstedtia

species: Kroppenstedtia sp.

full scientific name: Kroppenstedtia sp.


description: domain/bacteria

family: Nocardiopsidaceae

full scientific name: <I>Haloactinospora</I> Tang et al. 2008

genus: Haloactinospora

order: Streptosporangiales

species: Haloactinospora sp.

family: Nocardiopsaceae

full scientific name: Haloactinospora sp.


description: domain/bacteria

family: Bacillaceae

full scientific name: Fictibacillus iocasae Wang et al. 2025

genus: Fictibacillus

species: Fictibacillus iocasae

full scientific name: Fictibacillus iocasae Wang et al. 2018

description: Fictibacillus iocasae 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Aerococcaceae

full scientific name: Fundicoccus ignavus Siebert et al. 2020

genus: Fundicoccus

order: Lactobacillales

species: Fundicoccus ignavus

description: Fundicoccus ignavus strain DSM 109652 16S ribosomal RNA gene, partial sequence

description: ASM965937v1 assembly for Fundicoccus ignavus DSM 109652

description: ASM965949v1 assembly for Fundicoccus ignavus WS4759


description: domain/bacteria

description: Fundicoccus ignavus strain DSM 109653 16S ribosomal RNA gene, partial sequence

description: ASM965941v1 assembly for Fundicoccus ignavus DSM 109653


description: domain/bacteria

family: Morganellaceae

full scientific name: Proteus cibi Dai et al. 2019

genus: Proteus

order: Enterobacterales

species: Proteus cibi

description: Proteus cibi 16S ribosomal RNA gene, partial sequence

description: ASM314440v1 assembly for Proteus cibi FJ2001126-3


description: domain/bacteria

full scientific name: Proteus faecis Dai et al. 2019

species: Proteus faecis

description: Proteus faecis strain TJ1636 16S ribosomal RNA gene, partial sequence

description: ASM314439v1 assembly for Proteus faecis TJ1636


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Pandoraea fibrosis See-Too et al. 2019

genus: Pandoraea

order: Burkholderiales

species: Pandoraea fibrosis

description: Pandoraea fibrosis strain 6399 16S ribosomal RNA gene, partial sequence

description: ASM80777v2 assembly for Pandoraea fibrosis 6399


description: domain/bacteria

description: Pandoraea fibrosis strain 7641 16S ribosomal RNA gene, partial sequence

description: ASM80778v2 assembly for Pandoraea fibrosis 7641


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Brevibacillus sedimenti Patel et al. 2024

genus: Brevibacillus

species: Brevibacillus sedimenti

synonym: Anoxybacillus sediminis

full scientific name: Anoxybacillus sediminis Khan et al. 2019

genus: Anoxybacillus

species: Anoxybacillus sediminis

description: Anoxybacillus sediminis strain YIM 73012 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Aidingibacillus halophilus Wang et al. 2021

genus: Aidingibacillus

species: Aidingibacillus halophilus

full scientific name: Aidingibacillus halophilus Wang et al. 2018

description: Aidingibacillus halophilus strain YIM 98012 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Barnesiellaceae

full scientific name: Coprobacter secundus Shkoporov et al. 2015

genus: Coprobacter

species: Coprobacter secundus

synonym: Gabonia massiliensis

family: Porphyromonadaceae

full scientific name: Gabonia massiliensis Mourembou et al. 2016

genus: Gabonia

species: Gabonia massiliensis

description: Porphyromonadaceae bacterium GM3 partial 16S rRNA gene, strain GM3

description: Gabonia massiliensis assembly for Gabonia massiliensis GM3


class: Thermoprotei

description: domain/archaea

family: Desulfurococcaceae

full scientific name: Zestosphaera tikiterensis St John et al. 2021

genus: Zestosphaera

keyword: phylum/thermoproteota

order: Desulfurococcales

phylum: Thermoproteota

species: Zestosphaera tikiterensis

full scientific name: Zestosphaera tikiterensis St John et al. 2019

phylum: Crenarchaeota

description: Zestosphaera tikiterensis strain NZ3 16S ribosomal RNA gene, partial sequence

description: ASM305626v1 assembly for Zestosphaera tikiterensis


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Sellimonas caecigallum Wongkuna et al. 2020

genus: Sellimonas

order: Eubacteriales

species: Sellimonas caecigallum

description: Sellimonas sp. strain SW451 16S ribosomal RNA gene, partial sequence

description: ASM1975429v1 assembly for Sellimonas caecigallum SW451


description: domain/bacteria

full scientific name: Gracilibacillus aidingensis Guan et al. 2017

genus: Gracilibacillus

species: Gracilibacillus aidingensis

description: Gracilibacillus aidingensis strain YIM 98001 16S ribosomal RNA gene, partial sequence


class: Acidithiobacillia

description: domain/bacteria

family: Acidithiobacillaceae

full scientific name: Acidithiobacillus ferrianus Norris et al. 2020

genus: Acidithiobacillus

order: Acidithiobacillales

phylum: Pseudomonadota

species: Acidithiobacillus ferrianus

phylum: Proteobacteria

strain designation: MG

description: Acidithiobacillus sp. strain Milos 16S ribosomal RNA gene, partial sequence

description: Acidithiobacillus ferrianus strain MG 16S ribosomal RNA gene, partial sequence

description: MG_v5 assembly for Acidithiobacillus ferrianus MG


culture collection no.: DSM 103076, Marseille-P2481

description: domain/bacteria

full scientific name: Gracilibacillus timonensis Diop et al. 2023

species: Gracilibacillus timonensis

synonym: Gracilibacillus timonensis

full scientific name: Gracilibacillus timonensis Diop et al. 2019

description: Gracilibacillus timonensis partial 16S rRNA gene, type strain Marseille-P2481T

description: PRJEB13933 assembly for Gracilibacillus timonensis Marseille-P2481


description: domain/bacteria

family: Coriobacteriaceae

full scientific name: <I>Collinsella</I> Kageyama et al. 1999

genus: Collinsella

species: Collinsella sp.

full scientific name: Collinsella sp.


culture collection no.: DSM 103486, Marseille-P3115

description: domain/bacteria

family: Anaerovoracaceae

full scientific name: Alterileibacterium massiliense (Mailhe et al. 2017) Boxberger et al. 2019

genus: Alterileibacterium

order: Peptostreptococcales

species: Alterileibacterium massiliense

synonym: Ileibacterium massiliense

class: Erysipelotrichia

family: Erysipelotrichaceae

full scientific name: Ileibacterium massiliense Mailhe et al. 2017

genus: Ileibacterium

order: Erysipelotrichales

species: Ileibacterium massiliense

description: Ileibacterium massiliense partial 16S rRNA gene, type strain Marseille-P3115T

description: PRJEB16358 assembly for Alterileibacterium massiliense Marseille-P3115


class: Chroococcophyceae

description: domain/bacteria

family: Microcoleaceae

full scientific name: Planktothrix rubescens (De Candolle ex Gomont 1892) Anagnostidis and Komárek 1988

genus: Planktothrix

keyword: phylum/cyanobacteriota

order: Oscillatoriales

phylum: Cyanobacteriota

species: Planktothrix rubescens

synonym: Oscillatoria rubescens

class: Cyanophyceae

family: Oscillatoriaceae

full scientific name: Planktothrix rubescens Anagnostidis and Komárek 1988 emend. Suda et al. 2002

phylum: Cyanobacteria


class: Alphaproteobacteria

description: domain/bacteria

family: Rhizobiaceae

full scientific name: Agrobacterium arsenijevicii Kuzmanovic et al. 2019

genus: Agrobacterium

species: Agrobacterium arsenijevicii

full scientific name: Agrobacterium arsenijevicii Kuzmanovi? et al. 2019

description: Agrobacterium arsenijevicii strain KFB 330 16S ribosomal RNA gene, partial sequence.

description: ASM94989v1 assembly for Agrobacterium arsenijevicii KFB 330


description: domain/bacteria

full scientific name: Rhizobium tumorigenes Kuzmanovic et al. 2019

genus: Rhizobium

species: Rhizobium tumorigenes

synonym: Arminella tumorigenes

full scientific name: Rhizobium tumorigenes Kuzmanovi? et al. 2019

description: ASM324056v2 assembly for Rhizobium tumorigenes 1078


description: domain/bacteria


description: domain/bacteria

family: Micromonosporaceae

full scientific name: Micromonospora arida Carro et al. 2019

genus: Micromonospora

order: Micromonosporales

species: Micromonospora arida


class: Bacilli

description: domain/bacteria

family: Caryophanaceae

full scientific name: <I>Kurthia</I> Trevisan 1885 (Approved Lists 1980)

genus: Kurthia

species: Kurthia sp.

full scientific name: Kurthia sp.

strain designation: Dielmo

description: ASM30728v2 assembly for Kurthia sp. Dielmo type strain: Dielmo


description: domain/bacteria


description: domain/bacteria

family: Petrotogaceae

full scientific name: Tepiditoga spiralis Mori et al. 2021

genus: Tepiditoga

order: Petrotogales

phylum: Thermotogota

species: Tepiditoga spiralis

full scientific name: Tepiditoga spiralis Mori et al. 2020

phylum: Thermotogae

description: ASM1470119v1 assembly for Tepiditoga spiralis sy52


description: domain/bacteria

family: Eubacteriales, not assigned to family

full scientific name: Kallipyga gabonensis Mourembou et al. 2016

genus: Kallipyga

species: Kallipyga gabonensis

description: Kallipyga gabonensis assembly for Kallipyga gabonensis GM4


description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: Bifidobacterium oedipodis Neuzil-Bunesova et al. 2021

genus: Bifidobacterium

order: Bifidobacteriales

species: Bifidobacterium oedipodis

description: ASM1293242v1 assembly for Bifidobacterium oedipodis DSM 109957


description: domain/bacteria

family: Microbacteriaceae

full scientific name: Leucobacter massiliensis Leangapichart et al. 2018

genus: Leucobacter

order: Micrococcales

species: Leucobacter massiliensis

description: Leucobacter sp. 122RC15 partial 16S rRNA gene, strain 122RC15

description: ASM298231v1 assembly for Leucobacter massiliensis 122RC15


description: domain/bacteria

family: Streptosporangiaceae

full scientific name: Microbispora triticiradicis Han et al. 2018

genus: Microbispora

species: Microbispora triticiradicis

synonym: Microbispora fusca

full scientific name: Microbispora fusca Zhao et al. 2020

species: Microbispora fusca

description: Microbispora fusca strain NEAU-HEGS1-5 16S ribosomal RNA gene, partial sequence

description: ASM586406v1 assembly for Microbispora triticiradicis NEAU-HEGS1-5


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Cohnella zeiphila Johnson et al. 2022

genus: Cohnella

species: Cohnella zeiphila

full scientific name: Cohnella zeiphila Johnson et al. 2021

description: ASM1421205v1 assembly for Cohnella zeiphila CBP-2801


class: Thermoleophilia

description: domain/bacteria

family: Baekduiaceae

full scientific name: <I>Baekduia</I> An et al. 2019

genus: Baekduia

order: Solirubrobacterales

species: Baekduia sp.

full scientific name: Baekduia sp.

description: Conexibacter sp. 977 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Bifidobacterium moraviense Neuzil-Bunesova et al. 2021

species: Bifidobacterium moraviense

description: Bifidobacterium sp. VB25 strain VB25 = DSM 109958 16S ribosomal RNA gene, partial sequence.

description: ASM1293236v1 assembly for Bifidobacterium moraviense DSM 109958


culture collection no.: DSM 100642, Marseille-P1476, SIT 9, CSUR P1476

class: Coriobacteriia

description: domain/bacteria

family: Atopobiaceae

full scientific name: Olsenella massiliensis Zgheib et al. 2021

genus: Olsenella

order: Coriobacteriales

species: Olsenella massiliensis


description: domain/bacteria

family: Bartonellaceae

full scientific name: Mesorhizobium norvegicum Kabdullayeva et al. 2020

genus: Mesorhizobium

order: Hyphomicrobiales

species: Mesorhizobium norvegicum

family: Phyllobacteriaceae

description: Mesorhizobium norvegicum 16S ribosomal RNA gene, partial sequence

description: ASM491968v1 assembly for Mesorhizobium norvegicum 10.2.2


description: domain/bacteria

family: Propionibacteriaceae

full scientific name: Propionibacterium ruminifibrarum Vaidya et al. 2019

genus: Propionibacterium

order: Propionibacteriales

species: Propionibacterium ruminifibrarum

description: Propionibacterium ruminifibrarum strain JV5 16S ribosomal RNA gene, partial sequence

description: JV5 assembly for Propionibacterium ruminifibrarum


description: domain/bacteria

family: Erysipelotrichaceae

full scientific name: Massiliomicrobiota timonensis Ndongo et al. 2016

genus: Massiliomicrobiota

species: Massiliomicrobiota timonensis

synonym: Massilimicrobiota timonensis

full scientific name: Massilimicrobiota timonensis Tall et al. 2019

genus: Massilimicrobiota

species: Massilimicrobiota timonensis

description: Candidatus Stoquefichus sp. SN16 partial 16S rRNA gene, strain SN16


class: Bacteroidia

description: domain/bacteria

family: Bacteroidaceae

full scientific name: Massilibacteroides vaginae Jneid et al. 2018

genus: Massilibacteroides

order: Bacteroidales

species: Massilibacteroides vaginae

description: Porphyromonadaceae bacterium MV12 partial 16S rRNA gene, strain MV12

description: PRJEB20505 assembly for Massilibacteroides vaginae MV12


description: domain/bacteria

family: Nocardiopsidaceae

full scientific name: <I>Murinocardiopsis</I> Kämpfer et al. 2010

genus: Murinocardiopsis

order: Streptosporangiales

species: Murinocardiopsis sp.

family: Nocardiopsaceae

full scientific name: Murinocardiopsis sp.


description: domain/bacteria

family: Clostridiaceae

full scientific name: Massilioclostridium coli Lo et al. 2017

genus: Massilioclostridium

species: Massilioclostridium coli

description: Ruminococcus sp. Marseille-P2976 partial 16S rRNA gene, strain Marseille-P2976

description: PRJEB15310 assembly for Massilioclostridium coli Marseille-P2976


description: domain/bacteria

family: Christensenellaceae

full scientific name: Christensenella intestinihominis Zou et al. 2021

genus: Christensenella

species: Christensenella intestinihominis

description: Christensenella intestinihominis strain AF73-05CM02 16S ribosomal RNA gene, partial sequence

description: ASM167884v1 assembly for Christensenella intestinihominis AF73-05CM02

description: ASM2768051v1 assembly for Christensenella intestinihominis AF73-05CM02


description: domain/bacteria

full scientific name: Fontibacillus pullulanilyticus Inan Bektas et al. 2021

genus: Fontibacillus

order: Caryophanales

species: Fontibacillus pullulanilyticus

full scientific name: Fontibacillus pullulanilyticus Bektas et al. 2016

description: Fontibacillus pullulanilyticus strain DSHK107 16S ribosomal RNA gene, partial sequence


culture collection no.: DSM 103534, Marseille-P3114

description: domain/bacteria

family: Prevotellaceae

full scientific name: Metaprevotella massiliensis Ricaboni et al. 2017

genus: Metaprevotella

species: Metaprevotella massiliensis

description: Metaprevotella massiliensis partial 16S rRNA gene, type strain Marseille-P3114T


description: domain/bacteria

family: Blastochloridaceae

full scientific name: Blastochloris tepida Madigan et al. 2020

genus: Blastochloris

species: Blastochloris tepida

strain designation: GI

description: Blastochloris viridis strain GI 16S ribosomal RNA gene, partial sequence

description: ASM396671v1 assembly for Blastochloris tepida GI


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium urogenitale Ballas et al. 2020

genus: Corynebacterium

order: Mycobacteriales

species: Corynebacterium urogenitale

description: Corynebacterium urogenitale strain LMM-1652 16S ribosomal RNA gene, partial sequence

description: ASM902682v1 assembly for Corynebacterium urogenitale LMM-1652


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Limosilactobacillus reuteri (Kandler et al. 1982) Zheng et al. 2020

genus: Limosilactobacillus

order: Lactobacillales

species: Limosilactobacillus reuteri

synonym: Lactobacillus reuteri

description: Limosilactobacillus reuteri strain ClaCZ17 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Erysipelothrix piscisicarius Pomaranski et al. 2020

genus: Erysipelothrix

species: Erysipelothrix piscisicarius

description: Erysipelothrix sp. strain 15TAL0474 16S ribosomal RNA gene, partial sequence

description: ASM393179v1 assembly for Erysipelothrix piscisicarius 15TAL0474


class: Planctomycetia

description: domain/bacteria

family: Pirellulaceae

full scientific name: Blastopirellula retiformator Kallscheuer et al. 2021

genus: Blastopirellula

order: Pirellulales

phylum: Planctomycetota

species: Blastopirellula retiformator

full scientific name: Blastopirellula retiformator Kallscheuer et al. 2020

phylum: Planctomycetes

strain designation: Enrichment 8, Enr8

description: Blastopirellula retiformator 16S ribosomal RNA gene, partial sequence

description: ASM785975v1 assembly for Blastopirellula retiformator Enr8


description: domain/bacteria

family: Isosphaeraceae

full scientific name: Tautonia plasticadhaerens Jogler et al. 2021

genus: Tautonia

order: Isosphaerales

species: Tautonia plasticadhaerens

full scientific name: Tautonia plasticadhaerens Jogler et al. 2020

strain designation: El Plastico, ElP

description: ASM775253v1 assembly for Tautonia plasticadhaerens ElP


class: Epsilonproteobacteria

description: domain/bacteria

family: Nitratiruptoraceae

full scientific name: Nitratiruptor labii Fukushi et al. 2021

genus: Nitratiruptor

order: Epsilonproteobacteria, not assigned to order

species: Nitratiruptor labii

synonym: Nitrosophilus labii

full scientific name: Nitrosophilus labii Shiotani et al. 2020

genus: Nitrosophilus

species: Nitrosophilus labii

description: Nitrosophilus labii HRV44 gene for 16S ribosomal RNA, partial sequence

description: ASM1446698v1 assembly for Nitrosophilus labii HRV44


description: domain/bacteria

family: Streptomycetaceae

full scientific name: <I>Streptomyces</I> Waksman and Henrici 1943 (Approved Lists 1980)

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces sp.

synonym: Chainia

synonym: Actinacidiphila

synonym: Kitasatoa

synonym: Actinopycnidium

synonym: Elytrosporangium

synonym: Microellobosporia

synonym: Actinosporangium

synonym: Streptoverticillium

synonym: Microechinospora

synonym: Carbonactinospora

full scientific name: <I>Streptomyces</I> sp.

order: Streptomycetales


description: domain/bacteria

full scientific name: Lactobacillus delbrueckii subsp. bulgaricus (Orla-Jensen 1919) Weiss et al. 1984

genus: Lactobacillus

phylum: Bacillota

synonym: Lactobacillus bulgaricus

synonym: Thermobacterium bulgaricum

phylum: Firmicutes

description: Lactobacillus delbrueckii subsp. bulgaricus gene for 16S rRNA, partial sequence, strain: JCM 1001.


class: Methanococci

description: domain/archaea

family: Methanococcaceae

full scientific name: Methanococcus maripaludis Jones et al. 1984

genus: Methanococcus

order: Methanococcales

phylum: Methanobacteriota

species: Methanococcus maripaludis

synonym: Methanococcus deltae

phylum: Euryarchaeota

description: Methanococcus maripaludis 16S ribosomal RNA, complete sequence


description: domain/archaea

description: Methanococcus deltae 16S ribosomal RNA, complete sequence


class: Gammaproteobacteria

description: domain/bacteria

family: Pseudomonadaceae

full scientific name: <I>Pseudomonas</I> Migula 1894 (Approved Lists 1980)

genus: Pseudomonas

order: Pseudomonadales

species: Pseudomonas sp.

synonym: Metapseudomonas

synonym: Zestomonas

synonym: Caenipseudomonas

synonym: Phytopseudomonas

synonym: Ectopseudomonas

synonym: Aquipseudomonas

synonym: Geopseudomonas

synonym: Flavimonas

synonym: Chryseomonas

full scientific name: <I>Pseudomonas</I> sp.


class: Halobacteria

description: domain/archaea

family: Haloarculaceae

full scientific name: Haloarcula aidinensis Zhou et al. 1994

genus: Haloarcula

order: Halobacteriales

species: Haloarcula aidinensis

full scientific name: Haloarcula aidinensis

description: Haloarcula aidinensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 10024.


description: domain/archaea

description: Haloarcula aidinensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 10025.


class: Actinomycetes

description: domain/bacteria

family: Streptosporangiaceae

full scientific name: <I>Nonomuraea</I> corrig. Zhang et al. 1998

genus: Nonomuraea

species: Nonomuraea sp.

synonym: Sebekia

synonym: Nonomuria

class: Actinobacteria

full scientific name: <I>Nonomuraea</I> sp.


description: domain/bacteria

description: Nonomuraea sp. JCM 10028 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: <I>Amycolatopsis</I> Lechevalier et al. 1986

genus: Amycolatopsis

order: Pseudonocardiales

species: Amycolatopsis sp.

synonym: Yuhushiella

full scientific name: <I>Amycolatopsis</I> sp.


description: domain/bacteria

full scientific name: Streptomyces tsusimaensis Nishimura 1964

species: Streptomyces tsusimaensis

full scientific name: Streptomyces tsusimaensis Nishimura et al.

description: Streptomyces tsusimaensis gene for 16S rRNA, partial sequence, strain: NBRC 13782

description: Streptomyces tsusimaensis ATCC 15141


description: domain/bacteria

full scientific name: Streptomyces peucetius subsp. caesius Arcamone et al. 1969

species: Streptomyces peucetius subsp. caesius


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Brevibacillus brevis (Migula 1900) Shida et al. 1996

genus: Brevibacillus

species: Brevibacillus brevis

synonym: Bacillus brevis


description: domain/bacteria

full scientific name: Lactobacillus helveticus (Orla-Jensen 1919) Bergey et al. 1925 (Approved Lists 1980)

species: Lactobacillus helveticus

synonym: Lactobacillus suntoryeus

synonym: Thermobacterium helveticum

description: Lactobacillus helveticus gene for 16S rRNA, partial sequence, strain: JCM 1005.

description: ASM1569814v1 assembly for Lactobacillus helveticus JCM 1005


description: domain/bacteria

family: Microbacteriaceae

full scientific name: Agromyces cerinus subsp. cerinus (Zgurskaya et al. 1992) Zgurskaya et al. 1992

genus: Agromyces

order: Micrococcales

species: Agromyces cerinus subsp. cerinus

full scientific name: Agromyces cerinus subsp. cerinus Zgurskaya et al. 1992


description: domain/bacteria

full scientific name: <I>Agromyces</I> Gledhill and Casida 1969 (Approved Lists 1980)

species: Agromyces sp.

full scientific name: <I>Agromyces</I> sp.


description: domain/bacteria

full scientific name: Lactobacillus helveticus (Orla-Jensen 1919) Bergey et al. 1925

description: Lactobacillus helveticus gene for 16S rRNA, partial sequence, strain: JCM 1006.

description: ASM1569816v1 assembly for Lactobacillus helveticus JCM 1006


class: Betaproteobacteria

description: domain/bacteria

family: Comamonadaceae

full scientific name: <I>Acidovorax</I> Willems et al. 1990

genus: Acidovorax

order: Burkholderiales

species: Acidovorax sp.

synonym: Paenacidovorax

synonym: Paracidovorax

full scientific name: <I>Acidovorax</I> sp.

description: Acidovorax sp. JCM 10065 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

full scientific name: <I>Variovorax</I> Willems et al. 1991

genus: Variovorax

species: Variovorax sp.

full scientific name: <I>Variovorax</I> sp.

description: Variovorax sp. JCM 10066 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

full scientific name: Stutzerimonas stutzeri (Lehmann and Neumann 1896) Lalucat et al. 2022

genus: Stutzerimonas

species: Stutzerimonas stutzeri

synonym: Bacterium stutzeri

synonym: Pseudomonas stutzeri

full scientific name: Pseudomonas stutzeri (Lehmann and Neumann 1896) Sijderius 1946

species: Pseudomonas stutzeri


description: domain/bacteria

full scientific name: <I>Pseudomonas</I> Migula 1894 (Approved Lists 1980)

synonym: Metapseudomonas

synonym: Zestomonas

synonym: Caenipseudomonas

full scientific name: <I>Pseudomonas</I> sp.

description: Pseudomonas sp. JCM 10068 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Lactobacillus helveticus gene for 16S rRNA, partial sequence, strain: JCM 1007.

description: ASM1945593v1 assembly for Lactobacillus helveticus ATCC 10797

description: ASM1569818v1 assembly for Lactobacillus helveticus JCM 1007