description: domain/bacteria

family: Lawsonellaceae

full scientific name: Lawsonella clevelandensis Bell et al. 2016

genus: Lawsonella

order: Mycobacteriales

species: Lawsonella clevelandensis

order: Corynebacterineae, not assigned to order

description: Lawsonella clevelandensis strain X1036 16S ribosomal RNA gene, partial sequence

description: ASM129312v1 assembly for Lawsonella clevelandensis X1036


Matching level: species

class: Actinomycetes

description: domain/bacteria

domain: Bacteria

family: Propionibacteriaceae

full scientific name: Microlunatus kandeliicorticis Yang and Zhi 2020

genus: Microlunatus

keyword: phylum/actinomycetota

order: Propionibacteriales

phylum: Actinomycetota

species: Microlunatus kandeliicorticis

synonym: Friedmanniella endophytica

class: Actinobacteria

order: Actinomycetales

phylum: Actinobacteria

type strain: yes

database: nuccore

description: Microlunatus kandeliicorticis strain 4Q3S-3 16S ribosomal RNA gene, partial sequence

assembly level: contig

description: ASM1413785v1 assembly for Microlunatus kandeliicorticis DSM 100723


description: domain/bacteria

family: Micrococcaceae

full scientific name: Rothia aerolata Kämpfer et al. 2016

genus: Rothia

order: Micrococcales

species: Rothia aerolata

order: Pseudomonadales

description: Rothia aerolata strain 140917-MRSA-09 16S ribosomal RNA gene, partial sequence

description: Rothia aerolata strain CCM 8669 16S ribosomal RNA gene, partial sequence.

assembly level: scaffold

description: ASM1463558v1 assembly for Rothia aerolata CCM 8669


class: Vicinamibacteria

description: domain/bacteria

family: Vicinamibacteraceae

full scientific name: Vicinamibacter silvestris Huber et al. 2016

genus: Vicinamibacter

keyword: phylum/acidobacteriota

order: Vicinamibacterales

phylum: Acidobacteriota

species: Vicinamibacter silvestris

order: Acidobacteria, not assigned to order

phylum: Acidobacteria

description: Vicinamibacter silvestris strain Ac_5_C6 16S ribosomal RNA gene, partial sequence


class: Clostridia

description: domain/bacteria

family: Lachnospiraceae

full scientific name: Anaerotaenia torta Ueki et al. 2016

genus: Anaerotaenia

keyword: phylum/bacillota

order: Eubacteriales

phylum: Bacillota

species: Anaerotaenia torta

order: Clostridiales

phylum: Firmicutes

description: Anaerotaenia torta gene for 16S rRNA, partial sequence

description: ASM5043339v1 assembly for Anaerotaenia torta DSM 100431

assembly level: complete

description: Anaerotaenia torta DSM 100431


description: domain/bacteria

full scientific name: Anaerocolumna cellulosilytica Ueki et al. 2016

genus: Anaerocolumna

species: Anaerocolumna cellulosilytica

description: Anaerocolumna cellulosilytica gene for 16S rRNA, partial sequence

description: ASM1420287v1 assembly for Anaerocolumna cellulosilytica DSM 100423


class: Gammaproteobacteria

description: domain/bacteria

family: Pectobacteriaceae

full scientific name: Dickeya fangzhongdai Tian et al. 2016

genus: Dickeya

keyword: phylum/pseudomonadota

order: Enterobacterales

phylum: Pseudomonadota

species: Dickeya fangzhongdai

order: Enterobacteriales, not validated

phylum: Proteobacteria

description: Dickeya fangzhongdai strain JS5 16S ribosomal RNA gene, partial sequence

description: Dickeya fangzhongdai strain CGMCC 1.15464 16S ribosomal RNA gene, partial sequence.

description: ASM281248v1 assembly for Dickeya fangzhongdai DSM 101947

description: ASM1464295v1 assembly for Dickeya fangzhongdai CGMCC 1.15464


class: Halobacteria

description: domain/archaea

domain: Archaea

family: Natrialbaceae

full scientific name: Natrarchaeobaculum aegyptiacum (Zhao et al. 2018) Sorokin et al. 2020

genus: Natrarchaeobaculum

keyword: phylum/methanobacteriota

order: Halobacteriales

phylum: Methanobacteriota

species: Natrarchaeobaculum aegyptiacum

synonym: Natronolimnobius aegyptiacus

phylum: Euryarchaeota

strain designation: JW/NM-HA 15

description: Natronolimnobius sp. JW/NM-HA 15 16S ribosomal RNA gene, partial sequence

description: Natrarchaeobaculum aegyptiacum strain JW/NM-HA 15 16S ribosomal RNA gene, partial sequence

description: ASM215670v1 assembly for Natrarchaeobaculum aegyptiacum JW/NM-HA 15


class: Bacilli

description: domain/bacteria

family: Paenibacillaceae

full scientific name: Ammoniphilus resinae Lin et al. 2016

genus: Ammoniphilus

order: Caryophanales

species: Ammoniphilus resinae

order: Bacillales

strain designation: CC-RT-E

description: Ammoniphilus resinae strain CC-RT-E 16S ribosomal RNA gene, partial sequence

description: ASM1787396v1 assembly for Ammoniphilus resinae DSM 24738


description: domain/bacteria

family: Oscillospiraceae

full scientific name: Ruthenibacterium lactatiformans Shkoporov et al. 2016

genus: Ruthenibacterium

species: Ruthenibacterium lactatiformans

description: Ruthenibacterium lactatiformans strain 585-1 16S ribosomal RNA gene, partial sequence

description: ASM94945v1 assembly for Ruthenibacterium lactatiformans 585-1


description: domain/bacteria

full scientific name: Paenibacillus cisolokensis Yokota et al. 2016

genus: Paenibacillus

species: Paenibacillus cisolokensis

description: Paenibacillus cisolokensis gene for 16S ribosomal RNA, partial sequence

description: ASM1840366v1 assembly for Paenibacillus cisolokensis LC2-13A


description: domain/bacteria

family: Bacillaceae

full scientific name: Tepidibacillus infernus Podosokorskaya et al. 2016

genus: Tepidibacillus

species: Tepidibacillus infernus

strain designation: MBL-TLP

description: Tepidibacillus infernus strain MBL-TLP 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Actinomycetaceae

full scientific name: Varibaculum anthropi Glaeser et al. 2017

genus: Varibaculum

species: Varibaculum anthropi

description: Varibaculum anthropi strain CCUG 31793 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: <I>Varibaculum</I> Hall et al. 2003

species: Varibaculum sp.

full scientific name: Varibaculum sp.

type strain: no

description: Varibaculum anthropi strain CCUG 44993 16S ribosomal RNA gene, partial sequence

description: Varibaculum sp. CCUG 45271 16S ribosomal RNA gene, partial sequence.


culture collection no.: DSM 103074, CSUR P2802, Marseille-P2802

description: domain/bacteria

full scientific name: Varibaculum massiliense Niang et al. 2021

species: Varibaculum massiliense

synonym: Varibaculum massiliense

description: Varibaculum sp. Marseille-P2802 partial 16S rRNA gene, strain Marseille-P2802

description: PRJEB16532 assembly for Varibaculum massiliense Marseille-P2802


description: domain/bacteria

family: Yersiniaceae

full scientific name: <I>Rahnella</I> Izard et al. 1981

genus: Rahnella

species: Rahnella sp.

full scientific name: Rahnella sp.


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Thiopseudomonas alkaliphila (Drobish et al. 2016) Rudra and Gupta 2021

genus: Thiopseudomonas

species: Thiopseudomonas alkaliphila

synonym: Oblitimonas alkaliphila

full scientific name: Oblitimonas alkaliphila Drobish et al. 2016

genus: Oblitimonas

species: Oblitimonas alkaliphila

description: Oblitimonas alkaliphila strain B4199 16S ribosomal RNA gene, partial sequence

description: ASM126717v1 assembly for Thiopseudomonas alkaliphila B4199


description: domain/bacteria

family: Vibrionaceae

full scientific name: Vibrio algivorus Doi et al. 2016

genus: Vibrio

order: Vibrionales

species: Vibrio algivorus

order: Vibrionales, not validated

description: Vibrio algivorus gene for 16S ribosomal RNA, partial sequence, strain: SA2

description: ASM221800v2 assembly for Vibrio algivorus SA2

description: ASM3016121v1 assembly for Vibrio algivorus NBRC 111146


class: Chitinophagia

description: domain/bacteria

family: Chitinophagaceae

full scientific name: Pseudobacter ginsenosidimutans Siddiqi and Im 2016

genus: Pseudobacter

keyword: phylum/bacteroidota

order: Chitinophagales

phylum: Bacteroidota

species: Pseudobacter ginsenosidimutans

synonym: Pseudoflavitalea ginsenosidimutans

full scientific name: Pseudoflavitalea ginsenosidimutans (Siddiqi and Im 2016) Lawson et al. 2020

genus: Pseudoflavitalea

order: Sphingobacteriales

phylum: Bacteroidetes

species: Pseudoflavitalea ginsenosidimutans

description: Pseudobacter ginsenosidimutans strain Gsoil 221 16S ribosomal RNA gene, partial sequence

description: ASM429131v1 assembly for Pseudobacter ginsenosidimutans DSM 18116

description: ASM797018v1 assembly for Pseudobacter ginsenosidimutans Gsoil 221


class: Spirochaetia

description: domain/bacteria

family: Borreliaceae

full scientific name: Borrelia mayonii Pritt et al. 2016

genus: Borrelia

keyword: phylum/spirochaetota

order: Spirochaetales

phylum: Spirochaetota

species: Borrelia mayonii

synonym: Borreliella mayonii

phylum: Spirochaetes

description: Borreliella mayonii strain MN14-1420 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Micromonosporaceae

full scientific name: Dactylosporangium solaniradicis Fan et al. 2016

genus: Dactylosporangium

order: Micromonosporales

species: Dactylosporangium solaniradicis

order: Actinomycetales

description: Dactylosporangium solaniradicis strain NEAU-FJL2 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Photobacterium sanguinicancri Gomez-Gil et al. 2016

genus: Photobacterium

species: Photobacterium sanguinicancri

description: Photobacterium sanguinicancri strain Mj139 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Photobacterium sanguinicancri strain Mj110 16S ribosomal RNA gene, partial sequence

description: ASM226526v1 assembly for Photobacterium sanguinicancri CAIM 1827

description: ASM2434667v1 assembly for Photobacterium sanguinicancri CECT 7579


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Enterobacter mori Zhu et al. 2011

genus: Enterobacter

species: Enterobacter mori

synonym: Enterobacter tabaci

description: Enterobacter mori strain YIM Hb-3 16S ribosomal RNA gene, partial sequence.

description: Enterobacter tabaci strain YIM Hb-3 16S ribosomal RNA gene, partial sequence.

description: Enterobacter tabaci strain YIM Hb-3(T) 16S ribosomal RNA gene, partial sequence.

description: Enterobacter mori strain YIM Hb-3(T) 16S ribosomal RNA gene, partial sequence.

description: Enterobacter tabaci strain YIM-Hb-3 16S ribosomal RNA gene, partial sequence.

description: ASM360620v2 assembly for Enterobacter mori CCUG 72520

description: ASM4264860v1 assembly for Enterobacter mori KCTC 42694


description: domain/bacteria

family: Nocardioidaceae

full scientific name: Mumia xiangluensis Zhou et al. 2016

genus: Mumia

order: Propionibacteriales

species: Mumia xiangluensis

description: Mumia xiangluensis strain NEAU-KD1 16S ribosomal RNA gene, partial sequence

description: ASM1099409v1 assembly for Mumia xiangluensis NEAU-KD1 T

description: ASM4265838v1 assembly for Mumia xiangluensis CGMCC 4.7305


description: domain/bacteria

family: Tsukamurellaceae

full scientific name: Tsukamurella serpentis Tang et al. 2016

genus: Tsukamurella

order: Mycobacteriales

species: Tsukamurella serpentis

description: Tsukamurella serpentis strain HKU54 16S ribosomal RNA gene, partial sequence

description: Tsukamurella serpentis strain JCM 31017 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Propionibacteriaceae

full scientific name: Cutibacterium namnetense (Aubin et al. 2016) Nouioui et al. 2018

genus: Cutibacterium

species: Cutibacterium namnetense

synonym: Propionibacterium namnetense

description: Cutibacterium namnetense strain NTS 31307302 16S ribosomal RNA gene, partial sequence

description: ASM164202v1 assembly for Cutibacterium namnetense NTS 31307302


description: domain/bacteria

full scientific name: Micromonospora ureilytica Carro et al. 2016

genus: Micromonospora

species: Micromonospora ureilytica

description: Micromonospora sp. GUI23 partial 16S rRNA gene, isolate GUI23

description: ASM1575176v1 assembly for Micromonospora ureilytica DSM 101692


description: domain/bacteria

full scientific name: Micromonospora noduli Carro et al. 2016

species: Micromonospora noduli

description: Micromonospora sp. GUI43 partial 16S rRNA gene, isolate GUI43

description: ASM326436v1 assembly for Micromonospora noduli GUI43


description: domain/bacteria

full scientific name: Micromonospora vinacea Carro et al. 2016

species: Micromonospora vinacea

description: Micromonospora sp. GUI63 partial 16S rRNA gene, isolate GUI63

description: ASM1575178v1 assembly for Micromonospora vinacea DSM 101695


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium pollutisoli Negi et al. 2016

genus: Corynebacterium

species: Corynebacterium pollutisoli

description: Corynebacterium pollutisoli strain VDS11 16S ribosomal RNA gene, partial sequence

description: IMG-taxon 2708742385 annotated assembly for Corynebacterium pollutisoli VDS11


class: Thermoprotei

description: domain/archaea

family: Pyrodictiaceae

full scientific name: Pyrodictium delaneyi Lin et al. 2016

genus: Pyrodictium

keyword: phylum/thermoproteota

order: Desulfurococcales

phylum: Thermoproteota

species: Pyrodictium delaneyi

phylum: Crenarchaeota

description: Pyrodictium delaneyi strain Su06 16S ribosomal RNA gene, partial sequence

description: ASM141261v1 assembly for Pyrodictium delaneyi Su06


description: domain/bacteria

family: Microbacteriaceae

full scientific name: Agromyces aureus Corretto et al. 2016

genus: Agromyces

order: Micrococcales

species: Agromyces aureus

description: Agromyces aureus strain AR33 16S ribosomal RNA variant 1 gene, complete sequence

description: Agromyces aureus strain AR33 16S ribosomal RNA variant 2 gene, complete sequence

description: ASM166048v1 assembly for Agromyces aureus AR33

description: ASM974936v1 assembly for Agromyces aureus JCM 32431


description: domain/bacteria

full scientific name: Microlunatus nigridraconis Zhang et al. 2016

genus: Microlunatus

species: Microlunatus nigridraconis

description: Microlunatus nigridraconis strain CPCC 203993 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium lutetiense Konjek et al. 2016

genus: Mycobacterium

species: Mycobacterium lutetiense

synonym: Mycolicibacterium lutetiense

description: Mycolicibacterium lutetiense strain 071 16S ribosomal RNA gene, partial sequence

description: ASM1787677v1 assembly for Mycolicibacterium lutetiense DSM 46713


description: domain/bacteria

full scientific name: Mycobacterium montmartrense Konjek et al. 2016

species: Mycobacterium montmartrense

synonym: Mycolicibacterium montmartrense

strain designation: 196, ParisRGMnew_2

description: Mycolicibacterium montmartrense strain 196 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Mycobacterium arcueilense Konjek et al. 2016

species: Mycobacterium arcueilense

synonym: Mycolicibacterium arcueilense

description: Mycolicibacterium arcueilense strain 269 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Bacillus oryzisoli Zhang et al. 2016

genus: Bacillus

species: Bacillus oryzisoli

synonym: Niallia oryzisoli

full scientific name: Niallia oryzisoli (Zhang et al. 2016) Gupta et al. 2020

genus: Niallia

species: Niallia oryzisoli

description: Niallia oryzisoli strain 1DS3-10 16S ribosomal RNA gene, partial sequence

description: ASM3667002v1 assembly for Niallia oryzisoli DSM 29761


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Phocicoccus schoeneichii (Glaeser et al. 2016) Bello et al. 2024

genus: Phocicoccus

species: Phocicoccus schoeneichii

synonym: Jeotgalicoccus schoeneichii

full scientific name: Jeotgalicoccus schoeneichii Glaeser et al. 2016

genus: Jeotgalicoccus

species: Jeotgalicoccus schoeneichii

description: Phocicoccus schoeneichii strain 140805-STR-02 16S ribosomal RNA gene, partial sequence

description: ASM1463556v1 assembly for Phocicoccus schoeneichii CCM 8667

description: CIP111030 assembly for Phocicoccus schoeneichii CIP 111030


description: domain/bacteria

family: Oscillospiraceae

full scientific name: Agathobaculum butyriciproducens Ahn et al. 2016

genus: Agathobaculum

order: Eubacteriales

species: Agathobaculum butyriciproducens

order: Clostridiales

description: Agathobaculum butyriciproducens strain SR79 16S ribosomal RNA gene, partial sequence

description: ASM309653v1 assembly for Agathobaculum butyriciproducens DSM 100391


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Paenibacillus segetis Huang et al. 2016

genus: Paenibacillus

species: Paenibacillus segetis

description: Paenibacillus segetis strain DB13260 16S ribosomal RNA gene, partial sequence

description: ASM1463915v1 assembly for Paenibacillus segetis CGMCC 1.12769


class: Blastocatellia

description: domain/bacteria

family: Arenimicrobiaceae

full scientific name: Brevitalea aridisoli Wüst et al. 2016

genus: Brevitalea

order: Blastocatellales

species: Brevitalea aridisoli

description: Brevitalea aridisoli strain Ac_11_E3 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Brevitalea deliciosa Wüst et al. 2016

species: Brevitalea deliciosa

description: Brevitalea deliciosa strain Ac_16_C4 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Arenimicrobium luteum Wüst et al. 2016

genus: Arenimicrobium

species: Arenimicrobium luteum

description: Arenimicrobium luteum strain Ac_12_G8 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Granulosicoccaceae

full scientific name: Sulfuriflexus mobilis Kojima and Fukui 2016

genus: Sulfuriflexus

order: Chromatiales

species: Sulfuriflexus mobilis

description: Sulfuriflexus mobilis gene for 16S ribosomal RNA, partial sequence


class: Alphaproteobacteria

description: domain/bacteria

family: Thalassospiraceae

full scientific name: Varunaivibrio sulfuroxidans Patwardhan and Vetriani 2016

genus: Varunaivibrio

order: Rhodospirillales

species: Varunaivibrio sulfuroxidans

description: Varunaivibrio sulfuroxidans strain TC8 16S ribosomal RNA gene, partial sequence

description: ASM434172v1 assembly for Varunaivibrio sulfuroxidans DSM 101688

description: ASM2931863v1 assembly for Varunaivibrio sulfuroxidans TC8


class: Betaproteobacteria

description: domain/bacteria

family: Neisseriaceae

full scientific name: Neisseria musculi Weyand et al. 2016

genus: Neisseria

order: Neisseriales

species: Neisseria musculi

description: ASM4264980v1 assembly for Neisseria musculi CCUG 68283


description: domain/bacteria

family: Oxalobacteraceae

full scientific name: Affinundibacterium danionis (Kämpfer et al. 2016) Lu et al. 2026

genus: Affinundibacterium

order: Burkholderiales

species: Affinundibacterium danionis

synonym: Undibacterium danionis

full scientific name: Undibacterium danionis Kämpfer et al. 2016

genus: Undibacterium

species: Undibacterium danionis

description: Undibacterium danionis strain E3/4 16S ribosomal RNA gene, partial sequence

description: Undibacterium danionis strain CCM 8677 16S ribosomal RNA gene, partial sequence.

description: ASM4243246v1 assembly for Undibacterium danionis CCM 8677


description: domain/bacteria

family: Sphingomonadaceae

full scientific name: Sphingomonas zeicaulis Gao et al. 2016

genus: Sphingomonas

order: Sphingomonadales

species: Sphingomonas zeicaulis

synonym: Alteriyabuuchia zeicaulis

order: Pseudomonadales

description: Sphingomonas zeicaulis strain 541 16S ribosomal RNA gene, complete sequence

description: ASM5043322v1 assembly for Sphingomonas zeicaulis DSM 100587

description: Sphingomonas zeicaulis DSM 100587


description: domain/bacteria

family: Piscirickettsiaceae

full scientific name: Thiomicrorhabdus hydrogeniphila (Watsuji et al. 2016) Boden et al. 2017

genus: Thiomicrorhabdus

order: Beggiatoales

species: Thiomicrorhabdus hydrogeniphila

synonym: Thiomicrospira hydrogeniphila

order: Thiotrichales

description: Thiomicrorhabdus hydrogeniphila gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

family: Geodermatophilaceae

genus: Geodermatophilus

order: Geodermatophilales

species: Geodermatophilus pulveris

full scientific name: Geodermatophilus pulveris Hezbri et al. 2016 emend. Montero-Calasanz et al. 2017

description: Geodermatophilus sp. BMG 825 partial 16S rRNA gene, strain BMG 825

description: IMG-taxon 2700988693 annotated assembly for Geodermatophilus pulveris DSM 46839


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces camponoticapitis Li et al. 2016

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces camponoticapitis

order: Actinomycetales

description: Streptomyces camponoticapitis strain 2H-TWYE14 16S ribosomal RNA gene, partial sequence

description: ASM1464611v1 assembly for Streptomyces camponoticapitis CGMCC 4.7275


description: domain/bacteria

family: Jatrophihabitantaceae

genus: Jatrophihabitans

order: Jatrophihabitantales

species: Jatrophihabitans huperziae

full scientific name: Jatrophihabitans huperziae Gong et al. 2016 emend. Lee et al. 2018

description: Jatrophihabitans huperziae strain I13A-01604 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Nocardiopsidaceae

full scientific name: Lipingzhangella halophila Zhang et al. 2016

genus: Lipingzhangella

order: Streptosporangiales

species: Lipingzhangella halophila

family: Nocardiopsaceae

description: Lipingzhangella halophila strain EGI 80537 16S ribosomal RNA gene, partial sequence

description: ASM1420380v1 assembly for Lipingzhangella halophila DSM 102030


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: Herbihabitans rhizosphaerae Zhang et al. 2016

genus: Herbihabitans

order: Pseudonocardiales

species: Herbihabitans rhizosphaerae

description: Herbihabitans rhizosphaerae strain CPCC 204279 16S ribosomal RNA gene, partial sequence

description: ASM421655v1 assembly for Herbihabitans rhizosphaerae DSM 101727


description: domain/bacteria

family: Dermacoccaceae

full scientific name: Yimella radicis Yang et al. 2016

genus: Yimella

order: Micrococcales

species: Yimella radicis

description: Yimella radicis strain py1292 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Nocardioidaceae

full scientific name: Nocardioides baekrokdamisoli Lee et al. 2016

genus: Nocardioides

order: Propionibacteriales

species: Nocardioides baekrokdamisoli

description: Nocardioides baekrokdamisoli gene for 16S rRNA, partial sequence

description: ASM394532v1 assembly for Nocardioides baekrokdamisoli KCTC 39748


class: Cytophagia

description: domain/bacteria

family: Spirosomataceae

full scientific name: Dyadobacter endophyticus Gao et al. 2016

genus: Dyadobacter

order: Cytophagales

species: Dyadobacter endophyticus

family: Spirosomaceae

description: Dyadobacter endophyticus strain 65 16S ribosomal RNA gene, partial sequence

description: Dyadobacter endophyticus strain CGMCC 1.15288 16S ribosomal RNA gene, partial sequence.

description: ASM1464159v1 assembly for Dyadobacter endophyticus CGMCC 1.15288


description: domain/bacteria

family: Chitinophagaceae

full scientific name: Panacibacter ginsenosidivorans Siddiqi et al. 2016

genus: Panacibacter

order: Chitinophagales

species: Panacibacter ginsenosidivorans

order: Sphingobacteriales

description: Panacibacter ginsenosidivorans strain Gsoil 1550 16S ribosomal RNA gene, partial sequence

description: ASM797122v1 assembly for Panacibacter ginsenosidivorans Gsoil1550


Matching level: subspecies

description: domain/bacteria

family: Streptococcaceae

full scientific name: Lactococcus formosensis subsp. bovis (Varsha and Nampoothiri 2016) Zhang et al. 2021

genus: Lactococcus

order: Lactobacillales

species: Lactococcus formosensis subsp. bovis

synonym: Lactococcus garvieae subsp. bovis

full scientific name: Lactococcus garvieae subsp. bovis Varsha and Nampoothiri 2016

species: Lactococcus garvieae subsp. bovis

description: Lactococcus formosensis subsp. bovis strain BSN307 16S ribosomal RNA gene, partial sequence

description: ASM4268288v1 assembly for Lactococcus formosensis subsp. bovis KCTC 21083


class: Negativicutes

description: domain/bacteria

family: Sporomusaceae

full scientific name: Anaerosporomusa subterranea Choi et al. 2016

genus: Anaerosporomusa

order: Selenomonadales

species: Anaerosporomusa subterranea

strain designation: FRC-RU4, RU4

description: Anaerosporomusa subterranea strain RU4 16S ribosomal RNA gene, partial sequence

description: Bacterium FRC-RU4 16S ribosomal RNA gene, partial sequence

description: ASM161155v1 assembly for Anaerosporomusa subterranea RU4


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Paenibacillus silagei Tohno et al. 2016

genus: Paenibacillus

order: Caryophanales

species: Paenibacillus silagei

order: Bacillales

description: Paenibacillus silagei gene for 16S ribosomal RNA, partial sequence

description: ASM1787473v1 assembly for Paenibacillus silagei DSM 101953


description: domain/bacteria

family: Bartonellaceae

full scientific name: <I>Brucella</I> Meyer and Shaw 1920 (Approved Lists 1980)

genus: Brucella

order: Hyphomicrobiales

species: Brucella sp.

synonym: Ochrobactrum

family: Brucellaceae

full scientific name: Brucella sp.

order: Rhizobiales

description: BR141012304v1 assembly for Brucella inopinata 141012304

description: Brucella sp. DSM 103976

description: Brucella sp. DSM 103976


class: Desulfovibrionia

description: domain/bacteria

family: Desulfovibrionaceae

full scientific name: Pseudodesulfovibrio indicus Cao et al. 2016

genus: Pseudodesulfovibrio

keyword: phylum/thermodesulfobacteriota

order: Desulfovibrionales

phylum: Thermodesulfobacteriota

species: Pseudodesulfovibrio indicus

class: Deltaproteobacteria

description: Pseudodesulfovibrio indicus strain J2 16S ribosomal RNA gene, partial sequence

description: ASM436559v1 assembly for Pseudodesulfovibrio indicus DSM 101483

description: ASM156322v1 assembly for Pseudodesulfovibrio indicus J2


description: domain/bacteria

family: Bacillaceae

full scientific name: Tepidibacillus decaturensis Dong et al. 2016

genus: Tepidibacillus

species: Tepidibacillus decaturensis

description: Tepidibacillus decaturensis strain Z9 16S ribosomal RNA gene, partial sequence

description: ASM156191v1 assembly for Tepidibacillus decaturensis Z9


description: domain/bacteria

family: Oscillospiraceae

full scientific name: Harryflintia acetispora Petzoldt et al. 2016

genus: Harryflintia

order: Eubacteriales

species: Harryflintia acetispora

order: Clostridia, not assigned to order

description: Harryflintia acetispora strain V20-281a 16S ribosomal RNA gene, partial sequence

description: ASM434012v1 assembly for Harryflintia acetispora DSM 100433


description: domain/bacteria

full scientific name: Butyricicoccus faecihominis Takada et al. 2016

genus: Butyricicoccus

species: Butyricicoccus faecihominis

order: Clostridiales

description: Butyricicoccus faecihominis gene for 16S ribosomal RNA, partial sequence

description: ASM1464801v1 assembly for Butyricicoccus faecihominis JCM 31056

description: ASM1658637v1 assembly for Butyricicoccus faecihominis JCM 31056


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Herbinix luporum Koeck et al. 2016

genus: Herbinix

species: Herbinix luporum

description: Herbinix sp. SD1D partial 16S rRNA gene, isolate SD1D

description: SD1D assembly for Herbinix luporum SD1D


class: Thermodesulfobacteria

description: domain/bacteria

family: Thermodesulfobacteriaceae

full scientific name: Thermodesulfatator autotrophicus Lai et al. 2016

genus: Thermodesulfatator

order: Thermodesulfobacteriales

species: Thermodesulfatator autotrophicus

phylum: Thermodesulfobacteria

description: Thermodesulfatator autotrophicus strain S606 16S ribosomal RNA gene, partial sequence

description: ASM164232v1 assembly for Thermodesulfatator autotrophicus S606


description: domain/bacteria

family: Lysobacteraceae

full scientific name: Lysobacter firmicutimachus Miess et al. 2016

genus: Lysobacter

order: Lysobacterales

species: Lysobacter firmicutimachus

order: Pseudomonadales

description: Lysobacter firmicutimachus strain PB-6250 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Halopseudomonas oceani (Wang and Sun 2016) Rudra and Gupta 2021

genus: Halopseudomonas

species: Halopseudomonas oceani

synonym: Pseudomonas oceani

synonym: Neopseudomonas oceani

full scientific name: Pseudomonas oceani Wang and Sun 2016

genus: Pseudomonas

species: Pseudomonas oceani

strain designation: KX 20

description: Halopseudomonas oceani strain DSM 100277 16S ribosomal RNA gene, partial sequence

description: ASM290316v1 assembly for Halopseudomonas oceani DSM 100277

description: ASM1464129v1 assembly for Halopseudomonas oceani CGMCC 1.15195


description: domain/bacteria

family: Sphingomonadaceae

full scientific name: Sphingomonas prati Manandhar et al. 2016

genus: Sphingomonas

order: Sphingomonadales

species: Sphingomonas prati

synonym: Pararhizorhabdus prati

description: Sphingomonas prati strain W18RD 16S ribosomal RNA gene, partial sequence

description: ASM975580v1 assembly for Sphingomonas prati W18RD

description: ASM1464351v1 assembly for Sphingomonas prati CGMCC 1.15645

description: ASM1419940v1 assembly for Sphingomonas prati DSM 103336


class: Endomicrobiia

description: domain/bacteria

family: Endomicrobiaceae

full scientific name: Endomicrobium proavitum Zheng et al. 2018

genus: Endomicrobium

keyword: phylum/elusimicrobiota

order: Endomicrobiales

phylum: Elusimicrobiota

species: Endomicrobium proavitum

class: Endomicrobia

phylum: Elusimicrobia

description: ASM102754v1 assembly for Endomicrobium proavitum Rsa215


class: Actinomycetes

description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces bryophytorum Li et al. 2016

genus: Streptomyces

order: Kitasatosporales

phylum: Actinomycetota

species: Streptomyces bryophytorum

synonym: Actinacidiphila bryophytorum

class: Actinobacteria

order: Actinomycetales

phylum: Actinobacteria

description: Actinacidiphila bryophytorum strain NEAU-HZ10 16S ribosomal RNA gene, partial sequence

description: ASM1691683v1 assembly for Actinacidiphila bryophytorum DSM 42138

description: ASM1716473v1 assembly for Actinacidiphila bryophytorum DSM 42138

description: Scock-DSM42063-v1 assembly for Actinacidiphila cocklensis

description: SBRY-DSM42138-v2 assembly for Actinacidiphila bryophytorum

description: ASM4265592v1 assembly for Actinacidiphila bryophytorum CGMCC 4.7151


class: Gammaproteobacteria

description: domain/bacteria

full scientific name: Lysobacter cavernae Chen et al. 2016

species: Lysobacter cavernae

description: Lysobacter cavernae strain YIM C01544 16S ribosomal RNA gene, partial sequence

description: ASM4264850v1 assembly for Lysobacter cavernae KCTC 42875


description: domain/bacteria

family: Microbacteriaceae

full scientific name: Microbacterium gilvum Chen et al. 2016

genus: Microbacterium

order: Micrococcales

species: Microbacterium gilvum

description: Microbacterium gilvum strain YIM 100951 16S ribosomal RNA gene, complete sequence

description: ASM3954386v1 assembly for Microbacterium gilvum JCM 18537


class: Erysipelotrichia

description: domain/bacteria

family: Erysipelotrichaceae

full scientific name: Breznakia blatticola Tegtmeier et al. 2016

genus: Breznakia

order: Erysipelotrichales

phylum: Bacillota

species: Breznakia blatticola

phylum: Firmicutes

strain designation: ErySL

description: Breznakia blatticola strain ErySL 16S ribosomal RNA gene, partial sequence

description: ASM436581v1 assembly for Breznakia blatticola DSM 28867


description: domain/bacteria

full scientific name: Breznakia pachnodae Tegtmeier et al. 2016

species: Breznakia pachnodae

description: Eubacterium sp. Pei061 16S rRNA gene, isolate Pei061

description: ASM3081422v1 assembly for Breznakia pachnodae DSM 16784


class: Clostridia

description: domain/bacteria

full scientific name: Eisenbergiella massiliensis Togo et al. 2016

genus: Eisenbergiella

species: Eisenbergiella massiliensis

synonym: Eisenbergiella massiliensis

description: Eisenbergiella sp. AT9 partial 16S rRNA gene, strain AT11

description: PRJEB14662 assembly for Eisenbergiella massiliensis AT11


description: domain/bacteria

full scientific name: Neglectibacter timonensis Zgheib et al. 2024

genus: Neglectibacter

species: Neglectibacter timonensis

synonym: Neglecta timonensis

family: Clostridia, not assigned to family

full scientific name: Neglecta timonensis Bessis et al. 2016

genus: Neglecta

species: Neglecta timonensis

description: Clostridium sp. SN17 partial 16S rRNA gene, strain SN17


description: domain/bacteria

family: Nocardiaceae

full scientific name: Hoyosella rhizosphaerae Li et al. 2016

genus: Hoyosella

order: Mycobacteriales

species: Hoyosella rhizosphaerae

description: Hoyosella rhizosphaerae strain J12GA03 16S ribosomal RNA gene, partial sequence

description: ASM1464317v1 assembly for Hoyosella rhizosphaerae CGMCC 1.15478

description: ASM1715202v1 assembly for Hoyosella rhizosphaerae J12GA03


description: domain/bacteria

full scientific name: Microbacterium faecale Chen et al. 2016

species: Microbacterium faecale

description: Microbacterium faecale strain YIM 101168 16S ribosomal RNA gene, partial sequence

description: ASM1464097v1 assembly for Microbacterium faecale CGMCC 1.15152


description: domain/bacteria

family: Dermabacteraceae

full scientific name: Brachybacterium aquaticum Kaur et al. 2016

genus: Brachybacterium

species: Brachybacterium aquaticum

description: Brachybacterium aquaticum strain KWS1 16S ribosomal RNA gene, partial sequence

description: ASM1420475v1 assembly for Brachybacterium aquaticum DSM 28796


description: domain/bacteria

full scientific name: Nocardia jiangsuensis Bai et al. 2016

genus: Nocardia

species: Nocardia jiangsuensis

description: Nocardia jiangsuensis strain KLBMP S0027 16S ribosomal RNA gene, partial sequence

description: ASM4265038v1 assembly for Nocardia jiangsuensis CGMCC 4.7330


description: domain/bacteria

family: Gordoniaceae

full scientific name: Williamsia herbipolensis Kämpfer et al. 2016

genus: Williamsia

species: Williamsia herbipolensis

description: Williamsia herbipolensis strain ARP1 16S ribosomal RNA gene, partial sequence

description: WiARP1.0 assembly for Williamsia herbipolensis ARP1


description: domain/bacteria

full scientific name: Microbacterium diaminobutyricum Fidalgo et al. 2016

species: Microbacterium diaminobutyricum

description: Microbacterium diaminobutyricum strain RZ63 16S ribosomal RNA gene, partial sequence


class: Methanomicrobia

description: domain/archaea

family: Methanomicrobiaceae

full scientific name: Methanoeremita antiquus (Mochimaru et al. 2016) Zhou et al. 2024

genus: Methanoeremita

order: Methanomicrobiales

species: Methanoeremita antiquus

synonym: Methanomicrobium antiquum

full scientific name: Methanomicrobium antiquum Mochimaru et al. 2016

genus: Methanomicrobium

species: Methanomicrobium antiquum

strain designation: MobH

description: Methanoplanus sp. MobH gene for 16S ribosomal RNA, partial sequence

description: ASM2963391v1 assembly for Methanomicrobium antiquum DSM 21220


description: domain/bacteria

family: Micromonosporaceae

full scientific name: Micromonospora profundi Veyisoglu et al. 2016

genus: Micromonospora

order: Micromonosporales

species: Micromonospora profundi

description: Micromonospora profundi strain DS3010 16S ribosomal RNA gene, partial sequence

description: ASM1192778v1 assembly for Micromonospora profundi DSM 45981


description: domain/bacteria

family: Geodermatophilaceae

full scientific name: Blastococcus capsensis Hezbri et al. 2016

genus: Blastococcus

order: Geodermatophilales

species: Blastococcus capsensis

description: Blastococcus sp. BMG 804 partial 16S rRNA gene, strain BMG 804

description: ASM3016500v1 assembly for Blastococcus capsensis BMG 804


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: Actinocrispum wychmicini Hatano et al. 2016

genus: Actinocrispum

order: Pseudonocardiales

species: Actinocrispum wychmicini

description: Kibdelosporangium sp. MI503-A4 gene for 16S ribosomal RNA, partial sequence

description: ASM434564v1 assembly for Actinocrispum wychmicini DSM 45934


description: domain/bacteria

full scientific name: Saccharothrix isguenensis Bouznada et al. 2016

genus: Saccharothrix

species: Saccharothrix isguenensis

description: Saccharothrix isguenensis 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Streptomyces ovatisporus Veyisoglu et al. 2016

species: Streptomyces ovatisporus

description: Streptomyces ovatisporus strain S4702 16S ribosomal RNA gene, partial sequence

description: ASM4265388v1 assembly for Streptomyces ovatisporus CGMCC 4.7357


class: Crenarchaeota

family: Crenarchaeota, not assigned to family

full scientific name: Candidatus Nitrososphaera gargensis

genus: Candidatus Nitrososphaera

order: Crenarchaeota, not assigned to order

species: Candidatus Nitrososphaera gargensis


description: domain/bacteria

full scientific name: Streptacidiphilus torunensis corrig. Golinska et al. 2018

genus: Streptacidiphilus

species: Streptacidiphilus torunensis

synonym: Streptacidiphilus toruniensis

full scientific name: Streptacidiphilus torunensis Golinska et al. 2018

description: Streptacidiphilus torunensis strain NF37 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Nocardia lasii Liu et al. 2017

species: Nocardia lasii

description: Nocardia lasii strain 3C-HV12 16S ribosomal RNA gene, partial sequence

description: ASM4265854v1 assembly for Nocardia lasii CGMCC 4.7279


description: domain/bacteria

full scientific name: Saccharopolyspora griseoalba Jiang et al. 2016

genus: Saccharopolyspora

species: Saccharopolyspora griseoalba

description: Saccharopolyspora sp. AFM 10238 16S ribosomal RNA gene, partial sequence

description: ASM4266527v1 assembly for Saccharopolyspora griseoalba CGMCC 4.7124


description: domain/bacteria

full scientific name: Amycolatopsis jiguanensis Huang et al. 2021

genus: Amycolatopsis

species: Amycolatopsis jiguanensis

full scientific name: Amycolatopsis jiguanensis Huang et al. 2016

description: Amycolatopsis jiguanensis strain CFHS01580 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Peptococcaceae

full scientific name: Desulforamulus aquiferis (Berlendis et al. 2016) Watanabe et al. 2021

genus: Desulforamulus

order: Eubacteriales

species: Desulforamulus aquiferis

synonym: Desulfotomaculum aquiferis

full scientific name: Desulforamulus aquiferis

description: Desulforamulus aquiferis strain Bs105 16S ribosomal RNA gene, partial sequence

description: ASM414360v1 assembly for Desulforamulus aquiferis Bs105


description: domain/bacteria

full scientific name: Desulforamulus profundi (Berlendis et al. 2016) Watanabe et al. 2021

species: Desulforamulus profundi

synonym: Desulfotomaculum profundi

full scientific name: Desulforamulus profundi

description: Desulforamulus profundi strain Bs107 16S ribosomal RNA gene, partial sequence

description: ASM260785v1 assembly for Desulforamulus profundi Bs107


description: domain/bacteria

family: Caminicellaceae

full scientific name: Wukongibacter baidiensis Li et al. 2016

genus: Wukongibacter

order: Peptostreptococcales

species: Wukongibacter baidiensis

family: Peptostreptococcaceae

order: Clostridiales

description: Wukongibacter baidiensis strain DY30321 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Oscillospiraceae

full scientific name: Acetivibrio saccincola (Koeck et al. 2016) Tindall 2019

genus: Acetivibrio

species: Acetivibrio saccincola

synonym: Herbivorax saccincola

synonym: Hungateiclostridium saccincola

description: Clostridium sp. GGR1 partial 16S rRNA gene, isolate GGR1

description: ASM284439v1 assembly for Acetivibrio saccincola GGR1


description: domain/bacteria

family: Natronincolaceae

full scientific name: Serpentinicella alkaliphila Mei et al. 2016

genus: Serpentinicella

species: Serpentinicella alkaliphila

family: Clostridiaceae

description: Serpentinicella alkaliphila strain 3b 16S ribosomal RNA gene, partial sequence

assembly level: chromosome

description: ASM1814140v1 assembly for Serpentinicella alkaliphila 3B

description: ASM434590v1 assembly for Serpentinicella alkaliphila DSM 100013


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Falcatimonas natans Watanabe et al. 2016

genus: Falcatimonas

species: Falcatimonas natans

description: Falcatimonas natans gene for 16S rRNA, partial sequence


description: domain/bacteria

family: Francisellaceae

full scientific name: Allofrancisella inopinata Qu et al. 2016

genus: Allofrancisella

order: Beggiatoales

phylum: Pseudomonadota

species: Allofrancisella inopinata

order: Thiotrichales

phylum: Proteobacteria

description: Allofrancisella inopinata strain SYSU YG23 16S ribosomal RNA gene, partial sequence

description: ASM436555v1 assembly for Allofrancisella inopinata DSM 101834

description: ASM1222296v1 assembly for Allofrancisella inopinata SYSU YG23


description: domain/bacteria

full scientific name: Allofrancisella frigidaquae Qu et al. 2016

species: Allofrancisella frigidaquae

description: Allofrancisella frigidaquae strain SYSU 10HL1970 16S ribosomal RNA gene, partial sequence

description: ASM1222282v1 assembly for Allofrancisella frigidaquae SYSU 10HL1970


description: domain/bacteria

full scientific name: Allofrancisella guangzhouensis (Qu et al. 2013) Qu et al. 2016

species: Allofrancisella guangzhouensis

synonym: Francisella guangzhouensis

description: Francisella guangzhouensis strain 08HL01032 16S ribosomal RNA gene, partial sequence

description: ASM81522v1 assembly for Allofrancisella guangzhouensis 08HL01032


class: Acidithiobacillia

description: domain/bacteria

family: Acidithiobacillaceae

full scientific name: Acidithiobacillus thiooxidans (Waksman and Joffe 1922) Kelly and Wood 2000

genus: Acidithiobacillus

order: Acidithiobacillales

species: Acidithiobacillus thiooxidans

synonym: Acidithiobacillus concretivorus

synonym: Thiobacillus thiooxidans

synonym: Thiobacillus concretivorus

strain designation: CLST

description: Acidithiobacillus thiooxidans strain CL 16S ribosomal RNA gene, partial sequence

description: ASM207986v1 assembly for Acidithiobacillus thiooxidans CLST


description: domain/bacteria

family: Comamonadaceae

full scientific name: <I>Acidovorax</I> Willems et al. 1990

genus: Acidovorax

order: Burkholderiales

species: Acidovorax sp.

synonym: Paenacidovorax

synonym: Paracidovorax

full scientific name: Acidovorax sp.


Matching level: strain

culture collection no.: DSM 105126, ATCC 17978, CIP 53.77, LMG 1025, NCDC KC755, Bouvet and Grimont 8

description: domain/bacteria

family: Moraxellaceae

full scientific name: Acinetobacter baumannii Bouvet and Grimont 1986

genus: Acinetobacter

order: Pseudomonadales

species: Acinetobacter baumannii

strain designation: Piéchaud 5377, Piéchaud strain Rochefort

description: Acinetobacter baumannii ATCC 17978 strain HODAZ1 16S ribosomal RNA gene, partial sequence.

description: ASM1467277v1 assembly for Acinetobacter baumannii ATCC 17978

description: ASM159342v2 assembly for Acinetobacter baumannii ATCC 17978-VU

description: ASM107767v1 assembly for Acinetobacter baumannii ATCC 17978-mff

description: ASM1106706v1 assembly for Acinetobacter baumannii ATCC 17978

description: ASM1337208v1 assembly for Acinetobacter baumannii ATCC 17978

description: Acinetobacter baumannii ATCC17978 assembly for Acinetobacter baumannii ATCC 17978

description: ASM1542v1 assembly for Acinetobacter baumannii ATCC 17978

description: ASM2091200v1 assembly for Acinetobacter baumannii ATCC 17978

description: ASM2246713v1 assembly for Acinetobacter baumannii ATCC17978-VUB

description: ASM2616778v1 assembly for Acinetobacter baumannii ATCC 17978

description: ASM2616780v1 assembly for Acinetobacter baumannii ATCC 17978

description: ASM2945961v1 assembly for Acinetobacter baumannii ATCC17978 TnAraC-H0N27_12600

description: ASM4505602v1 assembly for Acinetobacter baumannii ATCC 17978

description: ASM1935621v1 assembly for Acinetobacter baumannii 17978UN

description: ASM479427v2 assembly for Acinetobacter baumannii ATCC 17978 ATCC 17978 substr. PMR-Low

description: ASM479715v2 assembly for Acinetobacter baumannii ATCC 17978 ATCC 17978 substr. PMR-High

description: ASM479423v2 assembly for Acinetobacter baumannii ATCC 17978 ATCC 17978 substr. Lab-WT

description: ASM194176v1 assembly for Acinetobacter baumannii AB042

description: ASM863089v1 assembly for Acinetobacter baumannii AB043

description: ASM172144v1 assembly for Acinetobacter baumannii XH181

description: ASM172142v1 assembly for Acinetobacter baumannii XH182

description: ASM172146v1 assembly for Acinetobacter baumannii XH183

description: ASM172147v1 assembly for Acinetobacter baumannii XH184

description: ASM172145v1 assembly for Acinetobacter baumannii XH191

description: ASM172138v1 assembly for Acinetobacter baumannii XH192

description: ASM172136v1 assembly for Acinetobacter baumannii XH193

description: ASM172137v1 assembly for Acinetobacter baumannii XH198


description: domain/bacteria

full scientific name: <I>Acinetobacter</I> Brisou and Prévot 1954 (Approved Lists 1980)

species: Acinetobacter sp.

full scientific name: Acinetobacter sp.

description: Root1280 assembly for Acinetobacter sp. Root1280


description: domain/bacteria

description: Leaf130 assembly for Acinetobacter sp. Leaf130


description: domain/bacteria

family: Alteromonadaceae

full scientific name: Alteromonas macleodii Baumann et al. 1972 (Approved Lists 1980)

genus: Alteromonas

order: Alteromonadales

species: Alteromonas macleodii

full scientific name: Alteromonas macleodii Baumann et al. 1972 emend. Yi et al. 2004 emend. Vandecandelaere et al. 2008

description: ASM80859v1 assembly for Alteromonas macleodii AD006


description: domain/bacteria

description: ASM80863v1 assembly for Alteromonas macleodii AD037


description: domain/bacteria

family: Thermomonosporaceae

full scientific name: Actinomadura alkaliterrae Ay et al. 2017

genus: Actinomadura

order: Streptosporangiales

species: Actinomadura alkaliterrae

order: Actinomycetales

description: Actinomadura alkaliterrae strain D310AT 16S ribosomal RNA gene, partial sequence


class: Archaeoglobi

description: domain/archaea

family: Archaeoglobaceae

full scientific name: Archaeoglobus fulgidus Stetter 1988

genus: Archaeoglobus

order: Archaeoglobales

phylum: Methanobacteriota

species: Archaeoglobus fulgidus

phylum: Euryarchaeota

description: ASM73403v1 assembly for Archaeoglobus fulgidus DSM 8774

description: Archaeoglobus fulgidus 7324


description: domain/bacteria

family: Micrococcaceae

full scientific name: Arthrobacter rhombi Osorio et al. 1999

genus: Arthrobacter

order: Micrococcales

species: Arthrobacter rhombi

description: Arthrobacter rhombi 16S rRNA gene, strain F58.3CB57

description: Arthrobacter rhombi 16S rRNA gene, strain F98.3HR69

description: ASM4167928v1 assembly for Arthrobacter rhombi DSM 15838

description: ASM3952624v1 assembly for Arthrobacter rhombi JCM 11678


description: domain/bacteria

full scientific name: <I>Arthrobacter</I> Conn and Dimmick 1947 (Approved Lists 1980)

species: Arthrobacter sp.

synonym: Crystallibacter

full scientific name: Arthrobacter sp.


class: Bacilli

description: domain/bacteria

family: Bacillaceae

full scientific name: Bacillus thuringiensis Berliner 1915 (Approved Lists 1980)

genus: Bacillus

order: Caryophanales

species: Bacillus thuringiensis

full scientific name: Bacillus thuringiensis Berliner 1915

order: Bacillales

strain designation: Bt GOE1


description: domain/bacteria

strain designation: Bt GOE2


description: domain/bacteria

strain designation: Bt GOE3


description: domain/bacteria

strain designation: Bt GOE4


description: domain/bacteria

strain designation: Bt GOE5


description: domain/bacteria

strain designation: Bt GOE6


description: domain/bacteria

strain designation: Bt GOE7


description: domain/bacteria

full scientific name: Bacillus mycoides Flügge 1886 (Approved Lists 1980)

species: Bacillus mycoides

synonym: Bacillus weihenstephanensis

synonym: Bacillus cereus subsp. mycoides

synonym: Bacillus hominis

full scientific name: Bacillus mycoides Flügge 1886 emend. Liu et al. 2018

strain designation: Bw GOE12


description: domain/bacteria

strain designation: Bw GOE1


description: domain/bacteria

strain designation: Bw GOE2


description: domain/bacteria

strain designation: Bw GOE3


description: domain/bacteria

strain designation: Bw GOE4


description: domain/bacteria

strain designation: Bw GOE5


description: domain/bacteria

strain designation: Bw GOE6


description: domain/bacteria

strain designation: Bw GOE7


description: domain/bacteria

strain designation: Bw GOE8


description: domain/bacteria

strain designation: Bw GOE9


description: domain/bacteria

strain designation: Bw GOE10


description: domain/bacteria

strain designation: Bw GOE11


description: domain/bacteria

strain designation: Bw GOE13


description: domain/bacteria

family: Geodermatophilaceae

full scientific name: Blastococcus colisei Hezbri et al. 2017

genus: Blastococcus

order: Geodermatophilales

species: Blastococcus colisei

description: Blastococcus colisei partial 16S rRNA gene, strain BMG 822

description: ASM671709v1 assembly for Blastococcus colisei DSM 46837


class: Betaproteobacteria

description: domain/bacteria

family: Alcaligenaceae

full scientific name: <I>Bordetella</I> Moreno-López 1952 (Approved Lists 1980)

genus: Bordetella

species: Bordetella sp.

full scientific name: Bordetella sp.


class: Alphaproteobacteria

description: domain/bacteria

family: Nitrobacteraceae

full scientific name: <I>Bradyrhizobium</I> Jordan 1982

genus: Bradyrhizobium

order: Hyphomicrobiales

species: Bradyrhizobium sp.

synonym: Agromonas

full scientific name: Bradyrhizobium sp.

order: Rhizobiales


description: domain/bacteria

family: Bradyrhizobiaceae


description: domain/bacteria

family: Caulobacteraceae

full scientific name: Brevundimonas nasdae Li et al. 2004

genus: Brevundimonas

order: Caulobacterales

species: Brevundimonas nasdae


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Burkholderia paludis Ong et al. 2025

genus: Burkholderia

species: Burkholderia paludis

full scientific name: Burkholderia paludis

strain designation: MSh1, MSh1T

description: Burkholderia paludis strain MSh1 16S ribosomal RNA gene, partial sequence

description: ASM73261v1 assembly for Burkholderia paludis MSh1


description: domain/bacteria

full scientific name: <I>Burkholderia</I> Yabuuchi et al. 1993

species: Burkholderia sp.

full scientific name: Burkholderia sp.

description: Leaf1773 assembly for Burkholderia sp. Leaf177


class: Epsilonproteobacteria

description: domain/bacteria

family: Campylobacteraceae

full scientific name: Campylobacter jejuni subsp. jejuni (Jones et al. 1931) Steele and Owen 1988

genus: Campylobacter

order: Campylobacterales

species: Campylobacter jejuni subsp. jejuni


class: Flavobacteriia

description: domain/bacteria

family: Weeksellaceae

full scientific name: <I>Chryseobacterium</I> Vandamme et al. 1994

genus: Chryseobacterium

order: Flavobacteriales

phylum: Bacteroidota

species: Chryseobacterium sp.

synonym: Soonwooa

synonym: Halpernia

synonym: Epilithonimonas

synonym: Kaistella

synonym: Planobacterium

synonym: Sejongia

full scientific name: Chryseobacterium sp.

phylum: Bacteroidetes


class: Desulfovibrionia

description: domain/bacteria

family: Desulfovibrionaceae

full scientific name: Desulfovibrio intestinalis Fröhlich et al. 1999

genus: Desulfovibrio

order: Desulfovibrionales

species: Desulfovibrio intestinalis

class: Deltaproteobacteria

description: Desulfovibrio intestinalis strain K62 16S ribosomal RNA gene, partial sequence


class: Thermoprotei

description: domain/archaea

family: Desulfurococcaceae

genus: Desulfurococcus

order: Desulfurococcales

species: Desulfurococcus amylolyticus

synonym: Desulfurococcus fermentans

synonym: Desulfurococcus kamchatkensis

full scientific name: Desulfurococcus amylolyticus Bonch-Osmolovskaya et al. 2001 emend. Perevalova et al. 2016

description: Desulfurococcus amylolyticus 16S ribosomal RNA gene, partial sequence

description: Desulfurococcus amylolyticus gene for 16S rRNA, partial sequence, strain: JCM 9188

description: ASM51385v1 assembly for Desulfurococcus amylolyticus Z-533


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: <I>Enterobacter</I> Hormaeche and Edwards 1960 (Approved Lists 1980)

genus: Enterobacter

order: Enterobacterales

species: Enterobacter sp.

synonym: Cloaca

full scientific name: Enterobacter sp.

order: Enterobacteriales, not validated

description: ASM214862v1 assembly for Enterobacter sp. J49


description: domain/bacteria

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

species: Escherichia coli

synonym: Bacillus coli

description: ASM2088351v1 assembly for Escherichia coli E2

description: ASM1888406v1 assembly for Escherichia coli E2

description: 50624_F01 assembly for Escherichia coli NCTC13846

description: E2 assembly for Escherichia coli

description: ASM332809v1 assembly for Escherichia coli E2

description: 15.TR.002_2OXA_OXA-48 assembly for Escherichia coli

description: ASM150965v1 assembly for Escherichia coli E2

description: ASM1716247v1 assembly for Escherichia coli E2

description: ASM169355v1 assembly for Escherichia coli E2

description: ASM227713v1 assembly for Escherichia coli E2

description: ASM2055658v1 assembly for Escherichia coli E2

description: ASM2536967v1 assembly for Escherichia coli E2


class: Actinomycetes

description: domain/bacteria

family: Bifidobacteriaceae

genus: Gardnerella

order: Bifidobacteriales

species: Gardnerella vaginalis

synonym: Corynebacterium vaginale

synonym: Haemophilus vaginalis

full scientific name: Gardnerella vaginalis (Gardner and Dukes 1955) Greenwood and Pickett 1980 emend. Nouioui et al. 2018 emend. Vaneechoutte et al. 2019


description: domain/bacteria

full scientific name: Gardnerella vaginalis (Gardner and Dukes 1955) Greenwood and Pickett 1980

class: Actinobacteria


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: <I>Flavobacterium</I> Bergey et al. 1923 (Approved Lists 1980)

genus: Flavobacterium

species: Flavobacterium sp.

full scientific name: Flavobacterium sp.

description: Flavobacterium sp. FB7 partial 16S rRNA gene, isolate FB7


description: domain/bacteria


description: domain/bacteria

family: Frankiaceae

full scientific name: Frankia inefficax Nouioui et al. 2017

genus: Frankia

order: Frankiales

species: Frankia inefficax

synonym: Pseudofrankia inefficax

description: Pseudofrankia inefficax strain EuI1c 16S ribosomal RNA gene, partial sequence

description: ASM16613v1 assembly for Pseudofrankia inefficax EuI1c


description: domain/bacteria

full scientific name: <I>Geobacillus</I> Nazina et al. 2001

genus: Geobacillus

species: Geobacillus sp.

full scientific name: Geobacillus sp.


description: domain/bacteria

family: Comamonadaceae

full scientific name: Hydrogenophaga temperata Kim et al. 2010

genus: Hydrogenophaga

order: Burkholderiales

species: Hydrogenophaga temperata

full scientific name: Hydrogenophaga sp.

species: Hydrogenophaga sp.

description: Hydrogenophaga temperata gene for 16S rRNA, partial sequence


description: domain/bacteria

full scientific name: <I>Hydrogenophaga</I> Willems et al. 1989

description: Hydrogenophaga sp. TRS-05 gene for 16S rRNA, partial sequence


culture collection no.: DSM 15862, YIM KN4

description: domain/bacteria

full scientific name: <I>Gracilibacillus</I> Wainø et al. 1999

genus: Gracilibacillus

species: Gracilibacillus sp.

full scientific name: Gracilibacillus sp.


description: domain/bacteria

full scientific name: <I>Halobacillus</I> Spring et al. 1996

genus: Halobacillus

species: Halobacillus sp.

full scientific name: Halobacillus sp.


description: domain/bacteria

family: Micrococcaceae

full scientific name: <I>Kocuria</I> Stackebrandt et al. 1995

genus: Kocuria

species: Kocuria sp.

synonym: Pelczaria

full scientific name: Kocuria sp.

order: Actinomycetales


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lactobacillus delbrueckii (Leichmann 1896) Beijerinck 1901 (Approved Lists 1980)

genus: Lactobacillus

order: Lactobacillales

species: Lactobacillus delbrueckii

synonym: Bacillus delbruecki


class: Gammaproteobacteria

description: domain/bacteria

full scientific name: Klebsiella pneumoniae (Schroeter 1886) Trevisan 1887 (Approved Lists 1980)

genus: Klebsiella

species: Klebsiella pneumoniae

synonym: Hyalococcus pneumoniae


description: domain/bacteria

full scientific name: Klebsiella pneumoniae (Schroeter 1886) Trevisan 1887


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Lonepinella koalarum Osawa et al. 1996

genus: Lonepinella

order: Pasteurellales

species: Lonepinella koalarum


class: Not assigned to order

family: Not assigned to family

full scientific name: Lyalikoviella elongata

genus: Lyalikoviella

order: Not assigned to order

phylum: Not assigned to order

species: Lyalikoviella elongata

strain designation: SK 1


description: domain/bacteria

full scientific name: Maribacter sedimenticola Nedashkovskaya et al. 2004

genus: Maribacter

species: Maribacter sedimenticola


family: Chromatiaceae

full scientific name: Marichromatium imhoffii

genus: Marichromatium

order: Chromatiales

species: Marichromatium imhoffii


description: domain/bacteria

family: Alteromonadaceae

full scientific name: <I>Marinobacter</I> Gauthier et al. 1992

genus: Marinobacter

order: Alteromonadales

species: Marinobacter sp.

full scientific name: Marinobacter sp.

description: Marinobacter koreensis strain KGB22 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Oxalobacteraceae

full scientific name: <I>Massilia</I> La Scola et al. 2000

genus: Massilia

species: Massilia sp.

synonym: Mokoshia

synonym: Naxibacter

full scientific name: Massilia sp.


description: domain/bacteria

description: Root1485 assembly for Massilia sp. Root1485


description: domain/bacteria

description: Root335 assembly for Massilia sp. Root335


description: domain/bacteria

description: Leaf139 assembly for Massilia sp. Leaf139


description: domain/bacteria

family: Bartonellaceae

full scientific name: <I>Mesorhizobium</I> Jarvis et al. 1997

genus: Mesorhizobium

order: Hyphomicrobiales

species: Mesorhizobium sp.

synonym: Allomesorhizobium

synonym: Neomesorhizobium

family: Phyllobacteriaceae

full scientific name: Mesorhizobium sp.

order: Rhizobiales

description: Root102 assembly for Mesorhizobium sp. Root102


description: domain/bacteria

description: Root1471 assembly for Mesorhizobium sp. Root1471


description: domain/bacteria

description: Root172 assembly for Mesorhizobium sp. Root172


description: domain/bacteria

description: Root552 assembly for Mesorhizobium sp. Root552


description: domain/bacteria

description: Root554 assembly for Mesorhizobium sp. Root554


description: domain/bacteria

description: Root695 assembly for Mesorhizobium sp. Root695


description: domain/bacteria

family: Microbacteriaceae

full scientific name: <I>Microbacterium</I> Orla-Jensen 1919 (Approved Lists 1980)

genus: Microbacterium

order: Micrococcales

species: Microbacterium sp.

synonym: Aureobacterium

synonym: Paramicrobacterium

full scientific name: Microbacterium sp.


description: domain/bacteria

family: Propionibacteriaceae

full scientific name: <I>Microlunatus</I> Nakamura et al. 1995

genus: Microlunatus

order: Propionibacteriales

species: Microlunatus sp.

synonym: Friedmanniella

full scientific name: Microlunatus sp.

description: Propionibacterineae bacterium Gsoil 950 gene for 16S rRNA, partial sequence


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium vaccae Bönicke and Juhasz 1964 (Approved Lists 1980)

genus: Mycobacterium

order: Mycobacteriales

species: Mycobacterium vaccae

synonym: Mycolicibacterium vaccae

full scientific name: Mycobacterium vaccae Bönicke and Juhasz 1964 emend. Nouioui et al. 2018

description: Mycobacterium vaccae 16S ribosomal RNA gene, partial sequence

description: M.vaccae 16S ribosomal RNA, part

description: Mycolicibacterium vaccae strain CECT 3019 16S ribosomal RNA gene, partial sequence.

description: Mycobacterium vaccae strain CIP 105934 16S ribosomal RNA gene, partial sequence.

description: ASM155271v1 assembly for Mycolicibacterium vaccae NBRC 14118 = CIP 105934

description: ASM165524v1 assembly for Mycolicibacterium vaccae 95051

description: ASM2582120v1 assembly for Mycolicibacterium vaccae DSM 43292


description: domain/bacteria

full scientific name: <I>Nesterenkonia</I> Stackebrandt et al. 1995

genus: Nesterenkonia

species: Nesterenkonia sp.

full scientific name: Nesterenkonia sp.


description: domain/bacteria

family: Nocardioidaceae

full scientific name: <I>Nocardioides</I> Prauser 1976 (Approved Lists 1980)

genus: Nocardioides

species: Nocardioides sp.

synonym: Pimelobacter

synonym: Marmoricola

full scientific name: Nocardioides sp.

description: Nocardioides sp. NS/27 16S rRNA gene, strain NS/27


description: domain/bacteria


description: domain/bacteria

family: Paracoccaceae

full scientific name: Paracoccus ferrooxidans Kumaraswamy et al. 2006

genus: Paracoccus

order: Rhodobacterales

species: Paracoccus ferrooxidans

family: Rhodobacteraceae

description: Paracoccus ferrooxidans strain BDN-1 16S ribosomal RNA gene, partial sequence

description: ASM2990981v1 assembly for Paracoccus ferrooxidans NCCB 100066


description: domain/bacteria

full scientific name: <I>Paracoccus</I> Davis 1969 (Approved Lists 1980)

species: Paracoccus sp.

synonym: Thiosphaera

full scientific name: Paracoccus sp.

strain designation: SST


description: domain/bacteria


description: domain/bacteria

strain designation: E 1


description: domain/bacteria

description: Paracoccus sp. AMV7 partial 16S rRNA gene, strain AMV7


class: Sphingobacteriia

description: domain/bacteria

family: Sphingobacteriaceae

full scientific name: <I>Pedobacter</I> Steyn et al. 1998

genus: Pedobacter

order: Sphingobacteriales

species: Pedobacter sp.

synonym: Nubsella

synonym: Paradesertivirga

full scientific name: Pedobacter sp.

description: Pedobacter sp. PB46 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Hevizibacter sp. P2K-21 partial 16S rRNA gene, isolate P2K-21


description: domain/bacteria

family: Caulobacteraceae

full scientific name: Phenylobacterium immobile Lingens et al. 1985

genus: Phenylobacterium

order: Caulobacterales

species: Phenylobacterium immobile

synonym: Phenylobacterium immobilis


family: Erythrobacteraceae

full scientific name: Porphyrobacter meromictus ???

genus: Porphyrobacter

order: Sphingomonadales

species: Porphyrobacter meromictus

strain designation: ML 4

description: Alpha proteobacterium ML4 partial 16S rRNA gene, strain ML4


description: domain/bacteria

full scientific name: <I>Erythrobacter</I> Shiba and Simidu 1982

genus: Erythrobacter

species: Erythrobacter sp.

synonym: Porphyrobacter

synonym: Erythromicrobium

full scientific name: Porphyrobacter sp.

species: Porphyrobacter sp.

description: Erythromicrobium sp. BF8 partial 16S rRNA gene, strain BF8


description: domain/bacteria

family: Roseobacteraceae

full scientific name: Roseovarius pelophilus Koepke 2007

genus: Roseovarius

species: Roseovarius pelophilus

full scientific name: Roseovarius pelophilus

description: Roseovarius pelophilus partial 16S rRNA gene, type strain G5IIT


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)

genus: Pseudomonas

order: Pseudomonadales

species: Pseudomonas aeruginosa

synonym: Pseudomonas paraeruginosa

synonym: Bacterium aeruginosum

strain designation: RP1, clone OC2E


description: domain/bacteria

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900

order: Burkholderiales

strain designation: M41A.1 clone 478A, M41A.1, clone 478A


description: domain/bacteria

full scientific name: Pseudomonas putida (Trevisan 1889) Migula 1895 (Approved Lists 1980)

species: Pseudomonas putida

synonym: Arthrobacter siderocapsulatus

synonym: Bacillus putidus

strain designation: TEC1 91-delta 1


description: domain/bacteria

family: Moraxellaceae

full scientific name: Psychrobacter glacincola Bowman et al. 1997

genus: Psychrobacter

species: Psychrobacter glacincola

description: Psychrobacter immobilis strain BNF20 16S ribosomal RNA gene, partial sequence

description: Psyc_v1 assembly for Psychrobacter glacincola BNF20


description: domain/bacteria

full scientific name: Psychrobacter maritimus Romanenko et al. 2004

species: Psychrobacter maritimus

description: Psychrobacter maritimus strain 3ps 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Psychrobacter urativorans Bowman et al. 1996

species: Psychrobacter urativorans


description: domain/bacteria

family: Rhizobiaceae

full scientific name: <I>Rhizobium</I> Frank 1889 (Approved Lists 1980)

genus: Rhizobium

species: Rhizobium sp.

synonym: Velazquezella

synonym: Arminella

synonym: Martinezella

synonym: Limnomicrobium

synonym: Phytoamicus

synonym: Metarhizobium

synonym: Paenirhizobium

synonym: Peteryoungia

full scientific name: Rhizobium sp.

description: Root73 assembly for Rhizobium sp. Root73


description: domain/bacteria

description: Root708 assembly for Rhizobium sp. Root708


description: domain/bacteria

description: Root1203 assembly for Rhizobium sp. Root1203


description: domain/bacteria

description: Root1204 assembly for Rhizobium sp. Root1204


description: domain/bacteria

description: Root1240 assembly for Rhizobium sp. Root1240


description: domain/bacteria

description: Root1334 assembly for Rhizobium sp. Root1334


description: domain/bacteria

description: Root149 assembly for Rhizobium sp. Root149


description: domain/bacteria

description: Root274 assembly for Rhizobium sp. Root274


description: domain/bacteria


description: domain/bacteria

description: Root482 assembly for Rhizobium sp. Root482


description: domain/bacteria

description: Root483D2 assembly for Rhizobium sp. Root483D2


description: domain/bacteria

description: Root491 assembly for Rhizobium sp. Root491


description: domain/bacteria

description: Root564 assembly for Rhizobium sp. Root564


description: domain/bacteria

description: Root651 assembly for Rhizobium sp. Root651


description: domain/bacteria

description: Leaf453 assembly for Rhizobium sp. Leaf453


description: domain/bacteria

description: Leaf262 assembly for Rhizobium sp. Leaf262


description: domain/bacteria

description: Leaf311 assembly for Rhizobium sp. Leaf311


description: domain/bacteria

description: Leaf321 assembly for Rhizobium sp. Leaf321


description: domain/bacteria

description: Leaf391 assembly for Rhizobium sp. Leaf391


description: domain/bacteria

description: Leaf386 assembly for Rhizobium sp. Leaf386


description: domain/bacteria

description: Leaf384 assembly for Rhizobium sp. Leaf384


description: domain/bacteria

description: Leaf383 assembly for Rhizobium sp. Leaf383


description: domain/bacteria

description: Leaf371 assembly for Rhizobium sp. Leaf371


description: domain/bacteria

description: Leaf341 assembly for Rhizobium sp. Leaf341


description: domain/bacteria

description: Leaf306 assembly for Rhizobium sp. Leaf306


description: domain/bacteria

description: Leaf202 assembly for Rhizobium sp. Leaf202


description: domain/bacteria

description: Leaf155 assembly for Rhizobium sp. Leaf155


description: domain/bacteria

description: Leaf167_v1 assembly for Rhizobium sp. Leaf167


description: domain/bacteria

description: Leaf68 assembly for Rhizobium sp. Leaf68


description: domain/bacteria

full scientific name: <I>Rhodobacter</I> Imhoff et al. 1984

genus: Rhodobacter

species: Rhodobacter sp.

synonym: Stagnihabitans

synonym: Paenirhodobacter

synonym: Sinorhodobacter

synonym: Sinirhodobacter

synonym: Sedimentimonas

full scientific name: Rhodobacter sp.

description: Rhodobacter sp. Cr4-37 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Rhodobacter sp. Cr5-50 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Uncultured Rhodobacteraceae bacterium partial 16S rRNA gene, isolate BF9


description: domain/bacteria

family: Hyphomicrobiaceae

full scientific name: Rhodomicrobium vannielii Duchow and Douglas 1949 (Approved Lists 1980)

genus: Rhodomicrobium

species: Rhodomicrobium vannielii

description: Rhodomicrobium vannielii partial 16S rRNA gene, strain BF14


class: Rhodothermia

description: domain/bacteria

family: Rhodothermaceae

genus: Rhodothermus

keyword: phylum/rhodothermota

order: Rhodothermales

phylum: Rhodothermota

species: Rhodothermus marinus

synonym: Rhodothermus obamensis

full scientific name: Rhodothermus marinus Alfredsson et al. 1995 emend. Park et al. 2019

order: Cytophagales

phylum: Rhodothermaeota


family: Not assigned to family

full scientific name: Sanuguinoglea alkalitolerans

genus: Sanuguinoglea

species: Sanuguinoglea alkalitolerans

strain designation: Nu


description: domain/bacteria

full scientific name: <I>Sphingobacterium</I> Yabuuchi et al. 1983

genus: Sphingobacterium

species: Sphingobacterium sp.

synonym: Sphingobacterium

full scientific name: Sphingobacterium sp.

order: Flavobacteriales

description: Sphingobacterium sp. 35 16S ribosomal RNA gene, partial sequence


culture collection no.: DSM 15885, ATCC BAA-766

class: Cytophagia

family: Spirosomaceae

full scientific name: Spirosoma escalantus

genus: Spirosoma

species: Spirosoma escalantus

description: Spirosoma escalantus strain HDK201 16S ribosomal RNA gene, partial sequence


culture collection no.: DSM 15884, ATCC BAA-763

full scientific name: Spirosoma navajo

species: Spirosoma navajo

description: Spirosoma navajo strain HDK666 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces jeddahensis Röttig et al. 2017

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces jeddahensis

order: Actinomycetales

description: Streptomyces jeddahensis strain G25 16S ribosomal RNA gene, partial sequence

description: ASM164299v1 assembly for Streptomyces jeddahensis G25


description: domain/bacteria

family: Comamonadaceae

full scientific name: <I>Tepidimonas</I> Moreira et al. 2000

genus: Tepidimonas

species: Tepidimonas sp.

full scientific name: Tepidimonas sp.


class: Thermotogae

description: domain/bacteria

family: Fervidobacteriaceae

full scientific name: Thermosipho africanus Huber et al. 1989

genus: Thermosipho

keyword: phylum/thermotogota

order: Thermotogales

phylum: Thermotogota

species: Thermosipho africanus

full scientific name: Thermosipho africanus Huber et al. 1989 emend. Ravot et al. 1996

phylum: Thermotogae

description: Thermosipho africanus strain TCF52B 16S ribosomal RNA gene, partial sequence

description: ASM2128v1 assembly for Thermosipho africanus TCF52B


class: Deinococci

description: domain/bacteria

family: Thermaceae

full scientific name: Thermus rehai Lin et al. 2002

genus: Thermus

keyword: phylum/deinococcota

order: Thermales

phylum: Deinococcota

species: Thermus rehai

phylum: Deinococcus-Thermus

description: Thermus rehai 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Oxalobacteraceae

full scientific name: Janthinobacterium svalbardensis Ambroži? Avguštin et al. 2013

genus: Janthinobacterium

species: Janthinobacterium svalbardensis

order: Clostridiales


description: domain/bacteria

family: Streptosporangiaceae

full scientific name: Planomonospora algeriensis Chaabane Chaouch et al. 2017

genus: Planomonospora

order: Streptosporangiales

phylum: Actinomycetota

species: Planomonospora algeriensis

description: Planomonospora algeriensis strain PM3 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Geodermatophilaceae

full scientific name: Geodermatophilus daqingensis Wang et al. 2017

genus: Geodermatophilus

order: Geodermatophilales

species: Geodermatophilus daqingensis

synonym: Petropleomorpha daqingensis

synonym: Pleomorpha daqingensis

phylum: Actinobacteria

description: Petropleomorpha daqingensis strain WT-2-1 16S ribosomal RNA gene, partial sequence

description: ASM1340898v1 assembly for Petropleomorpha daqingensis DSM 104001


class: Bacilli

description: domain/bacteria

family: Bacillaceae

full scientific name: Virgibacillus ainsalahensis Amziane et al. 2017

genus: Virgibacillus

order: Caryophanales

phylum: Bacillota

species: Virgibacillus ainsalahensis

order: Bacillales

strain designation: MerV


description: domain/bacteria

family: Zymomonadaceae

full scientific name: Zymomonas mobilis corrig. (Lindner 1928) Kluyver and van Niel 1936 (Approved Lists 1980)

genus: Zymomonas

species: Zymomonas mobilis

synonym: Zymomonas mobile

synonym: Thermobacterium mobile

full scientific name: Zymomonas mobilis (Lindner 1928) Kluyver and van Niel 1936

strain designation: UVS 51

description: ASM671600v1 assembly for Zymomonas mobilis DSM 12494


description: domain/bacteria

strain designation: CU 1

description: ASM671598v1 assembly for Zymomonas mobilis DSM 12495


description: domain/bacteria


description: domain/bacteria

strain designation: CU 1 Rif 2

description: ASM782875v1 assembly for Zymomonas mobilis

description: Zymomonas mobilis mobilis DSM 12497


description: domain/bacteria

family: Acetobacteraceae

full scientific name: Acetobacter oeni Silva et al. 2006

genus: Acetobacter

order: Rhodospirillales

species: Acetobacter oeni

order: Rhizobiales


description: domain/bacteria

family: Alteromonadaceae

full scientific name: Alteromonas marina Yoon et al. 2003

genus: Alteromonas

order: Alteromonadales

species: Alteromonas marina

description: ASM80857v1 assembly for Alteromonas marina AD001


description: domain/bacteria

family: Campylobacteraceae

full scientific name: Campylobacter jejuni (Jones et al. 1931) Véron and Chatelain 1973 (Approved Lists 1980)

genus: Campylobacter

order: Campylobacterales

species: Campylobacter jejuni

synonym: Vibrio jejuni

description: Campylobacter jejuni subsp. jejuni strain ATCC 29428 16S ribosomal RNA (rrs) gene, partial sequence

description: Campylobacter jejuni subsp. jejuni JCM 2013 gene for 16S ribosomal RNA, partial sequence

description: ASM61481v1 assembly for Campylobacter jejuni subsp. jejuni JCM 2013


description: domain/bacteria

full scientific name: Campylobacter jejuni subsp. doylei Steele and Owen 1988

species: Campylobacter jejuni subsp. doylei

description: Campylobacter jejuni subsp. doylei strain LMG 8843 16S ribosomal RNA (rrs) gene, partial sequence

description: 50377_B01 assembly for Campylobacter jejuni subsp. doylei NCTC11951

description: ASM70174v1 assembly for Campylobacter jejuni subsp. doylei ATCC 49349


description: domain/bacteria

family: Aerococcaceae

full scientific name: Facklamia miroungae Hoyles et al. 2001

genus: Facklamia

order: Lactobacillales

species: Facklamia miroungae

phylum: Firmicutes

strain designation: strain A/G13/99/2

description: Facklamia sp. CCUG 42728 partial 16S rRNA gene

description: Facklamia miroungae strain CCUG 42728 16S-23S ribosomal RNA intergenic spacer, complete sequence.

description: ASM1239655v1 assembly for Facklamia miroungae CCUG 42728

description: IMG-taxon 2675903695 annotated assembly for Facklamia miroungae ATCC BAA-466


description: domain/bacteria

full scientific name: Facklamia sourekii Collins et al. 1999

species: Facklamia sourekii

synonym: Hutsoniella sourekii

description: Facklamia sourekii 16S rRNA gene, type strain SS 1019

description: ASM51820v1 assembly for Hutsoniella sourekii ATCC 700629


description: domain/bacteria

full scientific name: Ruoffia tabacinasalis (Collins et al. 1999) Fotedar et al. 2021

genus: Ruoffia

species: Ruoffia tabacinasalis

synonym: Facklamia tabacinasalis

full scientific name: Facklamia tabacinasalis Collins et al. 1999

species: Facklamia tabacinasalis

description: Facklamia sp. CCUG30090 16S rRNA gene

description: ASM1586328v1 assembly for Ruoffia tabacinasalis DSM 104272

description: ASM4265298v1 assembly for Ruoffia tabacinasalis CCUG 30090

description: Facklamia tabacinasalis strain DSM 104272

description: Facklamia tabacinasalis DSM 104272


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Formosa algae Ivanova et al. 2004

genus: Formosa

species: Formosa algae

full scientific name: Formosa algae Ivanova et al. 2004 emend. Nedashkovskaya et al. 2006

description: ASM1787293v1 assembly for Formosa algae DSM 15523


description: domain/bacteria

family: Roseobacteraceae

full scientific name: Jannaschia seosinensis Choi et al. 2006

genus: Jannaschia

order: Rhodobacterales

phylum: Pseudomonadota

species: Jannaschia seosinensis

family: Rhodobacteraceae

description: Jannaschia seosinensis strain CL-SP26 16S ribosomal RNA gene, partial sequence

description: J.seosinensisCECT7799_CISA_Prokka assembly for Jannaschia seosinensis CECT 7799


description: domain/bacteria

family: Moritellaceae

full scientific name: Moritella marina (Baumann et al. 1984 ex Russell 1892) Urakawa et al. 1999

genus: Moritella

species: Moritella marina

synonym: Vibrio marinus

full scientific name: Moritella marina (Baumann et al. 1984) Urakawa et al. 1999

phylum: Proteobacteria

description: Moritella marina gene for 16S rRNA, partial sequence

description: V.marinus 16S rRNA gene (NCIMB 1144T)

description: Vibrio marinus 16S rRNA.

description: Vibrio marinus 16S rRNA.

description: Vibrio marinus 16S rRNA.

description: ASM893180v1 assembly for Moritella marina ATCC 15381 MP-1

description: ASM38186v1 assembly for Moritella marina ATCC 15381 MP-1

description: ASM29168v1 assembly for Moritella marina ATCC 15381


class: Bacteroidia

description: domain/bacteria

family: Porphyromonadaceae

full scientific name: Porphyromonas cangingivalis Collins et al. 1994

genus: Porphyromonas

order: Bacteroidales

species: Porphyromonas cangingivalis

description: Porphyromonas cangingivalis gene for 16S ribosomal RNA, partial sequence, strain: JCM 15983

description: P.cangingivalis (VPB 4874) 16S rRNA gene

description: Porphyromonas cangingivalis strain NCTC 12856 16S-23S ribosomal RNA intergenic spacer, partial sequence.

description: 57043_C01 assembly for Porphyromonas cangingivalis NCTC12856

description: ASM61435v1 assembly for Porphyromonas cangingivalis JCM 15983

description: IMG-taxon 2585428082 annotated assembly for Porphyromonas cangingivalis ATCC 700135


description: domain/bacteria

species: Porphyromonas crevioricanis

synonym: Porphyromonas cansulci

full scientific name: Porphyromonas crevioricanis Hirasawa and Takada 1994 emend. Sakamoto and Ohkuma 2013

description: Porphyromonas cansulci gene for 16S ribosomal RNA, partial sequence, strain: JCM 13913

description: P.cansulci (VPB 4875) 16S rRNA gene

description: Porphyromonas cansulci strain NCTC 12858 16S-23S ribosomal RNA intergenic spacer, partial sequence.

description: 53750_A02 assembly for Porphyromonas crevioricanis NCTC12858

description: ASM50926v1 assembly for Porphyromonas crevioricanis JCM 13913


description: domain/bacteria

family: Moraxellaceae

full scientific name: Psychrobacter fozii Bozal et al. 2003

genus: Psychrobacter

order: Pseudomonadales

species: Psychrobacter fozii

description: Psychrobacter fozii 16S rRNA gene, strain LMG 21280

description: ASM321715v1 assembly for Psychrobacter fozii CECT 5889


description: domain/bacteria

full scientific name: Psychrobacter luti Bozal et al. 2003

species: Psychrobacter luti

description: Psychrobacter luti 16S rRNA gene, strain LMG 21276

description: ASM1419211v1 assembly for Psychrobacter luti CECT 5885


description: domain/bacteria

family: Psychromonadaceae

full scientific name: Psychromonas marina Kawasaki et al. 2002

genus: Psychromonas

species: Psychromonas marina

description: Psychromonas sp. 4-22 gene for 16S rRNA

description: Psychromonas marina gene for 16S rRNA, partial sequence, strain: NBRC 103166.

description: ASM3016111v1 assembly for Psychromonas marina NBRC 103166


description: domain/bacteria

family: Spirosomataceae

full scientific name: Arcicella rosea Kämpfer et al. 2009

genus: Arcicella

order: Cytophagales

species: Arcicella rosea

family: Spirosomaceae

full scientific name: Arcicella rosea Kämpfer et al. 2009 emend. Chen et al. 2013

description: Arcicella rosea partial 16S rRNA gene, type strain TW5T

description: Arcicella rosea strain CCM 7523 16S ribosomal RNA gene, partial sequence.

description: ASM4054380v1 assembly for Arcicella rosea DSM 21163


description: domain/bacteria

family: Halomonadaceae

full scientific name: <I>Halomonas</I> Vreeland et al. 1980

genus: Halomonas

order: Oceanospirillales

species: Halomonas sp.

synonym: Volcaniella

synonym: Franzmannia

synonym: Onishia

synonym: Billgrantia

synonym: Vreelandella

synonym: Deleya

synonym: Litchfieldella

synonym: Bisbaumannia

full scientific name: Halomonas sp.

description: Halomonas sp. BL-171 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Halomonas tabrizica Vahed et al. 2020

species: Halomonas tabrizica

full scientific name: Halomonas tabrizica Vahed et al. 2018

strain designation: TBZ21, Tabriz21

description: Halomonas tabrizica strain TBZ21 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Thermaceae

full scientific name: Thermus brockianus Williams et al. 1995

genus: Thermus

species: Thermus brockianus

description: ASM188032v1 assembly for Thermus brockianus GE-1


description: domain/bacteria

family: Weeksellaceae

genus: Chryseobacterium

order: Flavobacteriales

species: Chryseobacterium taiwanense

full scientific name: Chryseobacterium taiwanense Tai et al. 2006 emend. Wu et al. 2013 emend. Montero-Calasanz et al. 2014


class: Alphaproteobacteria

description: domain/bacteria

family: Rhodospirillaceae

full scientific name: Magnetospirillum sulfuroxidans Koziaeva et al. 2023

genus: Magnetospirillum

species: Magnetospirillum sulfuroxidans

full scientific name: Magnetospirillum sulfuroxidans

description: Alpha proteobacterium J10 16S ribosomal RNA gene, partial sequence

description: ASM1822492v1 assembly for Magnetospirillum sulfuroxidans J10


description: domain/bacteria

full scientific name: <I>Maribacter</I> Nedashkovskaya et al. 2004

genus: Maribacter

species: Maribacter sp.

synonym: Maripseudobacter

full scientific name: Maribacter sp.

description: Flavobacteriaceae str. SW268 16S ribosomal RNA gene, partial sequence


family: Xanthobacteraceae

full scientific name: Labrys ginsengisoli

genus: Labrys

species: Labrys ginsengisoli

description: Labrys ginsengisoli gene for 16S rRNA, partial sequence


class: Halobacteria

description: domain/archaea

family: Haloferacaceae

full scientific name: Halorubrum orientale Castillo et al. 2006

genus: Halorubrum

order: Halobacteriales

phylum: Methanobacteriota

species: Halorubrum orientale

family: Halorubraceae

description: Halorubrum orientale 16S rRNA gene, type strain EJ-52T

description: Halorubrum orientale gene for 16S rRNA, complete sequence, strain: CECT 7145.


description: domain/bacteria

family: Rhodanobacteraceae

full scientific name: <I>Dokdonella</I> Yoon et al. 2006

genus: Dokdonella

order: Lysobacterales

species: Dokdonella sp.

full scientific name: Dokdonella sp.

order: Xanthomonadales


full scientific name: Rhodobacter maritimus

genus: Rhodobacter

species: Rhodobacter maritimus

description: Rhodobacteraceae bacterium D5-41 partial 16S rRNA gene, isolate D5-41


description: domain/bacteria

family: Thalassospiraceae

full scientific name: <I>Thalassospira</I> López-López et al. 2002

genus: Thalassospira

species: Thalassospira sp.

full scientific name: Thalassospira sp.

description: Thalassospira sp. Bp123 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Thalassospira sp. G12-1 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

description: Thalassospira sp. N5EA13-1A gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

family: Sphingomonadaceae

full scientific name: Sphingomonas pseudosanguinis Kämpfer et al. 2007

genus: Sphingomonas

order: Sphingomonadales

species: Sphingomonas pseudosanguinis

strain designation: CBAS-MD 134, BRR J3604


description: domain/bacteria

strain designation: CBAS-MD 137, BRRJ 3531


class: Flavobacteriia

family: Cryomorphaceae

full scientific name: Salibacter luridus

genus: Salibacter

order: Not assigned to order

species: Salibacter luridus

description: Flavobacterium sp. KSW-1 partial 16S rRNA gene, strain KSW-1


description: domain/bacteria

family: Alteromonadaceae

full scientific name: Marinobacter kribbensis Zhu et al. 2010

genus: Marinobacter

species: Marinobacter kribbensis

full scientific name: Marinobacter kribbensis

description: Marinobacter kribbensis strain Iso17 16S ribosomal RNA gene, partial sequence


family: Sphingobacteriaceae

full scientific name: Pedobacter kribbensis

genus: Pedobacter

order: Sphingobacteriales

species: Pedobacter kribbensis

description: Pedobacter kribbensis strain PB93 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: Saccharothrix ghardaiensis Bouznada et al. 2017

genus: Saccharothrix

order: Pseudonocardiales

species: Saccharothrix ghardaiensis

order: Actinomycetales

description: Saccharothrix ghardaiensis strain MB46 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Erythrobacteraceae

full scientific name: Novosphingobium resinovorum (Delaporte and Daste 1956) Lim et al. 2007

genus: Novosphingobium

species: Novosphingobium resinovorum

synonym: Flavobacterium resinovorum

synonym: Pseudonovosphingobium resinovorum

synonym: Novosphingobium subarcticum

synonym: Sphingomonas subarctica

strain designation: SA1, SX

description: ASM174222v1 assembly for Novosphingobium resinovorum SA1


description: domain/bacteria

full scientific name: Chryseobacterium flavum Zhou et al. 2007

species: Chryseobacterium flavum

strain designation: CW-E 2

description: Chryseobacterium flavum strain CW-E 2 16S ribosomal RNA gene, partial sequence

description: ASM4054531v1 assembly for Chryseobacterium flavum DSM 18973


description: domain/bacteria

family: Cyclobacteriaceae

full scientific name: Algoriphagus ornithinivorans (Yi and Chun 2004) Nedashkovskaya et al. 2007

genus: Algoriphagus

species: Algoriphagus ornithinivorans

synonym: Hongiella ornithinivorans

description: Algoriphagus sp. IMSNU 14015 16S ribosomal RNA gene, partial sequence


description: domain/archaea

full scientific name: Halorubrum ejinorense Castillo et al. 2007

species: Halorubrum ejinorense

phylum: Euryarchaeota

strain designation: EJ 32

description: Halorubrum ejinorense 16S rRNA gene, type strain EJ-32T

description: Halorubrum ejinorense gene for 16S ribosomal RNA, partial sequence, strain: JCM 14265.

description: Halorubrum ejinorense gene for 16S rRNA, complete sequence, strain: JCM 14265.

description: ASM4137980v1 assembly for Halorubrum ejinorense DSM 18646

description: ASM4266240v1 assembly for Halorubrum ejinorense CGMCC 1.6782

description: ASM3952256v1 assembly for Halorubrum ejinorense JCM 14265


description: domain/bacteria

family: Methylobacteriaceae

full scientific name: Microvirga arabica Veyisoglu et al. 2017

genus: Microvirga

order: Hyphomicrobiales

species: Microvirga arabica

order: Rhizobiales

description: Microvirga arabica strain SV2184P 16S ribosomal RNA gene, partial sequence

description: ASM1681123v1 assembly for Microvirga arabica SV2184P

description: ASM4268294v1 assembly for Microvirga arabica KCTC 23864


description: domain/bacteria

full scientific name: Microvirga makkahensis Veyisoglu et al. 2017

species: Microvirga makkahensis

description: Microvirga makkahensis strain SV1470 16S ribosomal RNA gene, partial sequence

description: ASM983010v1 assembly for Microvirga makkahensis KCTC 23863


description: domain/bacteria

family: Ignatzschineriaceae

full scientific name: Wohlfahrtiimonas chitiniclastica Tóth et al. 2008

genus: Wohlfahrtiimonas

order: Cardiobacteriales

species: Wohlfahrtiimonas chitiniclastica

family: Gammaproteobacteria, not assigned to family

description: ASM1841592v1 assembly for Wohlfahrtiimonas chitiniclastica DSM 100374


description: domain/bacteria

description: ASM1841590v1 assembly for Wohlfahrtiimonas chitiniclastica DSM 100375


description: domain/bacteria

description: ASM1841587v1 assembly for Wohlfahrtiimonas chitiniclastica DSM 100676


description: domain/bacteria

description: ASM1841586v1 assembly for Wohlfahrtiimonas chitiniclastica DSM 100917


description: domain/bacteria

family: Dermabacteraceae

full scientific name: <I>Brachybacterium</I> Collins et al. 1988

genus: Brachybacterium

order: Micrococcales

species: Brachybacterium sp.

full scientific name: Brachybacterium sp.


description: domain/bacteria

full scientific name: Pedobacter agri Roh et al. 2008

phylum: Bacteroidota

species: Pedobacter agri


description: domain/bacteria

family: Halomonadaceae

full scientific name: Kushneria indalinina (Cabrera et al. 2007) Sánchez-Porro et al. 2009

genus: Kushneria

species: Kushneria indalinina

synonym: Halomonas indalinina

description: Halomonas indalinina partial 16S rRNA gene, type strain CG2.1T

description: ASM338584v1 assembly for Kushneria indalinina DSM 14324


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces nanshensis Tian et al. 2009

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces nanshensis


culture collection no.: DSM 17296, JCM xxxxx, JAMB 0156

full scientific name: Marinobacter profunda

order: Alteromonadales

species: Marinobacter profunda


description: domain/bacteria

species: Pedobacter glucosidilyticus

full scientific name: Pedobacter glucosidilyticus Luo et al. 2010 emend. Zhou et al. 2012 emend. Hahnke et al. 2016

phylum: Bacteroidetes

description: ASM79911v1 assembly for Pedobacter glucosidilyticus DD6b


class: Betaproteobacteria

description: domain/bacteria

family: Oxalobacteraceae

full scientific name: <I>Undibacterium</I> Kämpfer et al. 2007

genus: Undibacterium

order: Burkholderiales

species: Undibacterium sp.

full scientific name: Undibacterium sp.

strain designation: TR 48


class: Phycisphaerae

description: domain/bacteria

family: Phycisphaeraceae

full scientific name: Phycisphaera mikurensis Fukunaga et al. 2010

genus: Phycisphaera

keyword: phylum/planctomycetota

order: Phycisphaerales

phylum: Planctomycetota

species: Phycisphaera mikurensis

phylum: Planctomycetes

description: Phycisphaera mikurensis gene for 16S ribosomal RNA, partial sequence, strain: NBRC 102666

description: ASM28411v1 assembly for Phycisphaera mikurensis NBRC 102666

description: ASM1420739v1 assembly for Phycisphaera mikurensis DSM 103959

description: AE-24oct19-296 assembly for Phycisphaera mikurensis NBRC 102666

description: LE-05nov19-197 assembly for Phycisphaera mikurensis NBRC 102666

description: MsE-30jul19-209 assembly for Phycisphaera mikurensis NBRC 102666

description: ME-08apr19-305 assembly for Phycisphaera mikurensis NBRC 102666


description: domain/bacteria

full scientific name: Salinicola halophilus de la Haba et al. 2010

genus: Salinicola

order: Oceanospirillales

species: Salinicola halophilus

synonym: Chromohalobacter salarius

description: Chromohalobacter salarius partial 16S rRNA gene, type strain CG4.1T

description: ASM320615v1 assembly for Salinicola halophilus CECT 5903


description: domain/bacteria

family: Dysgonomonadaceae

full scientific name: Dysgonomonas hofstadii Lawson et al. 2010

genus: Dysgonomonas

order: Bacteroidales

species: Dysgonomonas hofstadii

description: Dysgonomonas hofstadii partial 16S rRNA gene, type strain MX 1040T

description: Dysgonomonas hofstadii gene for 16S ribosomal RNA, partial sequence, strain: JCM 17038

description: ASM1419691v1 assembly for Dysgonomonas hofstadii DSM 104969

description: ASM131252v1 assembly for Dysgonomonas hofstadii JCM 17038 = DSM 104969


class: Methanomicrobia

description: domain/archaea

family: Methanomicrobiaceae

full scientific name: Methanoculleus hydrogenitrophicus Tian et al. 2010

genus: Methanoculleus

order: Methanomicrobiales

species: Methanoculleus hydrogenitrophicus

strain designation: HC

description: Methanoculleus hydrogenitrophicus strain HC 16S ribosomal RNA gene, partial sequence

description: Methanoculleus hydrogenitrophicus DSM 25996


description: domain/bacteria

family: Nitrobacteraceae

full scientific name: <I>Afipia</I> Brenner et al. 1992

genus: Afipia

species: Afipia sp.

synonym: Oligotropha

full scientific name: Afipia sp.

description: Root123D2 assembly for Afipia sp. Root123D2


class: Epsilonproteobacteria

description: domain/bacteria

family: Arcobacteraceae

full scientific name: Arcobacter trophiarum De Smet et al. 2011

genus: Arcobacter

order: Campylobacterales

species: Arcobacter trophiarum

synonym: Aliarcobacter trophiarum

family: Campylobacteraceae

strain designation: 64, De Smet 64


description: domain/bacteria

family: Piscirickettsiaceae

full scientific name: Methylophaga muralis corrig. Doronina et al. 2011

genus: Methylophaga

order: Beggiatoales

species: Methylophaga muralis

synonym: Methylophaga murata

full scientific name: Methylophaga muralis Doronina et al. 2011

order: Thiotrichales

description: Methylophaga muralis strain Bur 1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Bacillaceae

full scientific name: Oceanobacillus kimchii Whon et al. 2011

genus: Oceanobacillus

order: Caryophanales

species: Oceanobacillus kimchii

order: Bacillales

description: Oceanobacillus kimchii strain X50 16S ribosomal RNA gene, partial sequence

description: ASM34047v1 assembly for Oceanobacillus kimchii X50

description: Oceanobacillus kimchii X50


description: domain/bacteria

family: Roseobacteraceae

full scientific name: Pacificibacter maritimus Romanenko et al. 2011

genus: Pacificibacter

order: Rhodobacterales

species: Pacificibacter maritimus

family: Rhodobacteraceae

description: Pacificibacter maritimus gene for 16S ribosomal RNA, partial sequence

description: ASM381491v1 assembly for Pacificibacter maritimus DSM 104731


description: domain/bacteria

full scientific name: Primorskyibacter sedentarius Romanenko et al. 2011

genus: Primorskyibacter

species: Primorskyibacter sedentarius

description: Primorskyibacter sedentarius gene for 16S ribosomal RNA, partial sequence, strain: KMM 9018

description: ASM434206v1 assembly for Primorskyibacter sedentarius DSM 104836


class: Clostridia

description: domain/bacteria

family: Lachnospiraceae

full scientific name: Blautia massiliensis Durand et al. 2017

genus: Blautia

order: Eubacteriales

species: Blautia massiliensis

order: Clostridia, not assigned to order

description: Blautia massiliensis1 assembly for Blautia massiliensis (ex Durand et al. 2017) GD9


description: domain/bacteria

family: Sphingomonadaceae

full scientific name: <I>Sphingobium</I> Takeuchi et al. 2001

genus: Sphingobium

order: Sphingomonadales

species: Sphingobium sp.

synonym: Parasphingobium

synonym: Alterisphingobium

synonym: Yabuuchia

full scientific name: Sphingobium sp.

order: Pseudomonadales

description: Sphingomonas sp. EGY1 16S ribosomal RNA gene, partial sequence


class: Gammaproteobacteria

description: domain/bacteria

family: Erwiniaceae

full scientific name: Pantoea rwandensis Brady et al. 2012

genus: Pantoea

order: Enterobacterales

species: Pantoea rwandensis

order: Enterobacteriales, not validated

description: Pantoea rwandensis strain LMG 26275 16S ribosomal RNA gene, complete sequence

description: ASM209547v1 assembly for Pantoea rwandensis LMG 26275


class: Actinomycetes

description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: Pseudonocardia sichuanensis Qin et al. 2012

genus: Pseudonocardia

order: Pseudonocardiales

species: Pseudonocardia sichuanensis

class: Actinobacteria

order: Actinomycetales

description: Pseudonocardia sichuanensis strain KLBMP 1115 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus rivorum Niemi et al. 2012

genus: Enterococcus

order: Lactobacillales

species: Enterococcus rivorum

description: Enterococcus rivorum strain S299 16S ribosomal RNA, partial sequence

description: Enterococcus rivorum partial 16S rRNA gene, type strain HAMBI 3055T

description: Enterococcus rivorum strain CCM 7986 16S ribosomal RNA gene, partial sequence.

description: ASM174228v1 assembly for Enterococcus rivorum LMG 25899

description: ASM1787489v1 assembly for Enterococcus rivorum DSM 104544

description: ASM4264830v1 assembly for Enterococcus rivorum CCM 7986

description: ASM4268382v1 assembly for Enterococcus rivorum CCM 7986


description: domain/bacteria

family: Alcaligenaceae

full scientific name: Advenella faeciporci Matsuoka et al. 2012

genus: Advenella

order: Burkholderiales

species: Advenella faeciporci

description: Advenella faeciporci gene for 16S rRNA, partial sequence

description: ASM1465239v1 assembly for Advenella faeciporci KCTC 23732

description: ASM3954129v1 assembly for Advenella faeciporci JCM 17746