description: domain/bacteria

full scientific name: Enterobacter cloacae (Jordan 1890) Hormaeche and Edwards 1960 (Approved Lists 1980)

genus: Enterobacter

order: Enterobacterales

species: Enterobacter cloacae

synonym: Bacillus cloacae

synonym: Bacterium cloacae

synonym: Cloaca cloacae


Matching level: species

class: Betaproteobacteria

description: domain/bacteria

domain: Bacteria

family: Comamonadaceae

full scientific name: Acidovorax avenae (Manns 1909) Willems et al. 1992

genus: Acidovorax

keyword: phylum/pseudomonadota

order: Burkholderiales

phylum: Pseudomonadota

species: Acidovorax avenae

synonym: Phytomonas rubrilineans

synonym: Paracidovorax avenae

synonym: Pseudomonas avenae

synonym: Pseudomonas rubrilineans

phylum: Proteobacteria

type strain: no

database: nuccore

description: Paracidovorax avenae gene for 16S rRNA, strain: ATCC 19307.


class: Clostridia

description: domain/bacteria

family: Clostridiaceae

full scientific name: Clostridium perfringens (Veillon and Zuber 1898) Hauduroy et al. 1937 (Approved Lists 1980)

genus: Clostridium

keyword: phylum/bacillota

order: Eubacteriales

phylum: Bacillota

species: Clostridium perfringens

synonym: Bacillus perfringens

synonym: Clostridioides perfringens

phylum: Firmicutes


class: Bacilli

description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus pyogenes Rosenbach 1884 (Approved Lists 1980)

genus: Streptococcus

order: Lactobacillales

species: Streptococcus pyogenes


class: Gammaproteobacteria

description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987

genus: Salmonella

species: Salmonella enterica

synonym: Bacillus typhimurium

synonym: Bacillus enteritidis

synonym: Salmonella enteritidis

synonym: Salmonella paratyphi

synonym: Salmonella typhi

synonym: Salmonella typhimurium

synonym: Bacillus typhi

synonym: Bacillus choleraesuis

synonym: Salmonella choleraesuis


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas fluorescens Migula 1895 (Approved Lists 1980)

genus: Pseudomonas

order: Pseudomonadales

species: Pseudomonas fluorescens

description: Pseudomonas fluorescens gene for 16S rRNA, partial sequence, strain: NBRC 3903

description: Pseudomonas fluorescens strain LMG 5822 16S ribosomal RNA gene, partial sequence

description: Pseudomonas fluorescens JCM 13058 gene for 16S rRNA, partial sequence

description: Pseudomonas fluorescens strain BCRC 10304 16S-23S ribosomal RNA intergenic spacer, complete sequence.

description: Pseudomonas fluorescens strain ATCC 948 16S ribosomal RNA gene, partial sequence.

assembly level: scaffold

description: ATCC948-2 assembly for Pseudomonas fluorescens ATCC 948 substr. 2

description: ATCC948-1 assembly for Pseudomonas fluorescens ATCC 948 substr. 1


description: domain/bacteria

full scientific name: Pseudomonas plecoglossicida Nishimori et al. 2000

species: Pseudomonas plecoglossicida

description: Pseudomonas plecoglossicida JCM 13296 gene for 16S rRNA, partial sequence


description: domain/bacteria

assembly level: contig

description: 50618_C02 assembly for Clostridium perfringens NCTC8359


description: domain/bacteria

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

species: Escherichia coli

synonym: Bacillus coli


description: domain/bacteria

full scientific name: Streptococcus pneumoniae (Klein 1884) Chester 1901 (Approved Lists 1980)

species: Streptococcus pneumoniae

synonym: Micrococcus pneumoniae

synonym: Staphylococcus pneumoniae

strain designation: SSISP 10B/2


description: domain/bacteria

strain designation: SSISP 10C/2


description: domain/bacteria

strain designation: SSISP 16 A/1


description: domain/bacteria

strain designation: SSISP 25 A/2


description: domain/bacteria

strain designation: SSISP 37/1


description: domain/bacteria

strain designation: SSISP 38/2


description: domain/bacteria

strain designation: SSISP 39/2


description: domain/bacteria

strain designation: SSISP 40/2


description: domain/bacteria

family: Alcaligenaceae

full scientific name: Bordetella holmesii Weyant et al. 1995

genus: Bordetella

species: Bordetella holmesii

strain designation: Hol B1


description: domain/bacteria


description: domain/bacteria

full scientific name: Klebsiella pneumoniae (Schroeter 1886) Trevisan 1887 (Approved Lists 1980)

genus: Klebsiella

species: Klebsiella pneumoniae

synonym: Hyalococcus pneumoniae


description: domain/bacteria

full scientific name: Citrobacter portucalensis Ribeiro et al. 2017

genus: Citrobacter

species: Citrobacter portucalensis


description: domain/bacteria


class: Actinomycetes

description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium genitalium (ex Furness and Evangelista 1976) Jaén-Luchoro et al. 2023

genus: Corynebacterium

keyword: phylum/actinomycetota

order: Mycobacteriales

phylum: Actinomycetota

species: Corynebacterium genitalium

synonym: Corynebacterium genitalium

class: Actinobacteria

phylum: Actinobacteria

description: Corynebacterium genitalium 16S ribosomal RNA gene, complete sequence.


description: domain/bacteria

family: Alteromonadaceae

full scientific name: Marinobacterium iners (Iizuka and Komagata 1964) Tindall 2020

genus: Marinobacterium

order: Alteromonadales

species: Marinobacterium iners

synonym: Pseudomonas iners

synonym: Marinobacterium georgiense

species: Marinobacterium georgiense

type strain: yes

description: Marinobacterium georgiense gene for 16S rRNA, strain: IAM 1419

description: Marinobacterium georgiense gene for 16S rRNA, partial sequence, strain: NBRC 102196


class: Not assigned to order

family: Not assigned to family

genus: Aerosphaera

order: Not assigned to order

phylum: Not assigned to order

species: Aerosphaera taetra


description: domain/bacteria


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980)

genus: Staphylococcus

order: Caryophanales

species: Staphylococcus aureus

synonym: Staphylococcus aureus subsp. anaerobius

synonym: Staphylococcus roterodami


description: domain/bacteria

family: Caryophanaceae

full scientific name: Lysinibacillus sphaericus (Meyer and Neide 1904) Ahmed et al. 2007

genus: Lysinibacillus

species: Lysinibacillus sphaericus

synonym: Lysinibacillus varians

synonym: Lysinibacillus mangiferihumi

synonym: Bacillus sphaericus

synonym: Lysinibacillus tabacifolii

synonym: Lysinibacillus mangiferahumi

family: Bacillaceae

strain designation: Army 87


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces hygroscopicus (Jensen 1931) Yüntsen et al. 1956 (Approved Lists 1980)

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces hygroscopicus

synonym: Streptomyces endus

synonym: Actinomyces hygroscopicus

order: Streptomycetales


class: Negativicutes

description: domain/bacteria

family: Veillonellaceae

full scientific name: Megasphaera geminata (Carlier et al. 2002) Heng et al. 2025

genus: Megasphaera

order: Veillonellales

species: Megasphaera geminata

synonym: Anaeroglobus geminatus

genus: Anaeroglobus

species: Anaeroglobus geminatus

description: Anaeroglobus geminatus 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Listeriaceae

full scientific name: Listeria monocytogenes (Murray et al. 1926) Pirie 1940 (Approved Lists 1980)

genus: Listeria

species: Listeria monocytogenes

synonym: Bacterium monocytogenes


class: Hydrogenophilia

description: domain/bacteria

family: Hydrogenophilaceae

full scientific name: Hydrogenophilus thermoluteolus Hayashi et al. 1999

genus: Hydrogenophilus

order: Hydrogenophilales

species: Hydrogenophilus thermoluteolus


description: domain/bacteria

family: Morganellaceae

full scientific name: Proteus vulgaris Hauser 1885 (Approved Lists 1980)

genus: Proteus

species: Proteus vulgaris


description: domain/bacteria

full scientific name: Clostridium spiroforme Kaneuchi et al. 1979 (Approved Lists 1980)

genus: Clostridium

species: Clostridium spiroforme

synonym: Thomasclavelia spiroformis


culture collection no.: CIP A83

description: domain/bacteria

family: Actinomycetaceae

full scientific name: Trueperella pyogenes (Glage 1903) Yassin et al. 2011

genus: Trueperella

order: Actinomycetales

species: Trueperella pyogenes

synonym: Actinomyces pyogenes

synonym: Corynebacterium pyogenes

synonym: Arcanobacterium pyogenes

synonym: Bacillus pyogenes


description: domain/bacteria

full scientific name: Providencia rettgeri (Hadley et al. 1918) Brenner et al. 1978 (Approved Lists 1980)

genus: Providencia

species: Providencia rettgeri

synonym: Proteus rettgeri

synonym: Rettgerella rettgeri

synonym: Bacterium rettgeri


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Leuconostoc mesenteroides (Tsenkovskii 1878) van Tieghem 1878 (Approved Lists 1980)

genus: Leuconostoc

species: Leuconostoc mesenteroides

synonym: Ascococcus mesenteroides

family: Leuconostocaceae

description: Leuconostoc mesenteroides subsp. mesenteroides gene for 16S ribosomal RNA, partial sequence, strain: JCM 11042


species: Corynebacterium segmentosum

description: Corynebacterium segmentosum partial 16S rRNA gene, strain CIP107068

description: Corynebacterium segmentosum partial 16S rRNA gene, strain NCTC 934

assembly level: complete

description: 52683_C03 assembly for Corynebacterium segmentosum NCTC934


class: Epsilonproteobacteria

description: domain/bacteria

family: Campylobacteraceae

full scientific name: Campylobacter lari corrig. Benjamin et al. 1984

genus: Campylobacter

order: Campylobacterales

species: Campylobacter lari

synonym: Campylobacter laridis


species: Corynebacterium oriphocae


description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus faecium (Orla-Jensen 1919) Schleifer and Kilpper-Bälz 1984

genus: Enterococcus

species: Enterococcus faecium

synonym: Streptococcus faecium


description: domain/bacteria

full scientific name: Bacillus subtilis (Ehrenberg 1835) Cohn 1872 (Approved Lists 1980)

genus: Bacillus

species: Bacillus subtilis

synonym: Vibrio subtilis

strain designation: PM 15


description: domain/bacteria

family: Moraxellaceae

full scientific name: Acinetobacter baumannii Bouvet and Grimont 1986

genus: Acinetobacter

species: Acinetobacter baumannii


description: domain/bacteria

family: Alcaligenaceae

full scientific name: Bordetella pertussis (Bergey et al. 1923) Moreno-López 1952 (Approved Lists 1980)

genus: Bordetella

species: Bordetella pertussis

synonym: Hemophilus pertussis


description: domain/bacteria

family: Neisseriaceae

full scientific name: Neisseria meningitidis (Albrecht and Ghon 1901) Murray 1929 (Approved Lists 1980)

genus: Neisseria

order: Neisseriales

species: Neisseria meningitidis

synonym: Micrococcus meningitidis


description: domain/bacteria

full scientific name: Listeria seeligeri Rocourt and Grimont 1983

species: Listeria seeligeri


description: domain/bacteria

family: Cytobacillaceae

full scientific name: Mesobacillus thioparans (Pérez-Ibarra et al. 2007) Patel and Gupta 2020

genus: Mesobacillus

species: Mesobacillus thioparans

synonym: Bacillus thioparus

synonym: Bacillus thioparans

species: Bacillus thioparans


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Pasteurella multocida (Lehmann and Neumann 1899) Rosenbusch and Merchant 1939 (Approved Lists 1980)

genus: Pasteurella

order: Pasteurellales

species: Pasteurella multocida

synonym: Micrococcus gallicidus

synonym: Pasteurella gallicida

synonym: Bacterium multocidum


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Shigella boydii Ewing 1949 (Approved Lists 1980)

genus: Shigella

order: Enterobacterales

species: Shigella boydii


class: Flavobacteriia

description: domain/bacteria

family: Weeksellaceae

full scientific name: Elizabethkingia meningoseptica (King 1959) Kim et al. 2005

genus: Elizabethkingia

keyword: phylum/bacteroidota

order: Flavobacteriales

phylum: Bacteroidota

species: Elizabethkingia meningoseptica

synonym: Flavobacterium meningosepticum

synonym: Chryseobacterium meningosepticum

family: Flavobacteriaceae

phylum: Bacteroidetes

description: Chryseobacterium meningosepticum partial 16S rRNA gene, strain ATCC 13255

description: Elizabethkingia meningoseptica strain ATCC 13255 16S-23S ribosomal RNA intergenic spacer, complete sequence.

description: 58833_E01 assembly for Elizabethkingia anophelis NCTC10586


description: domain/bacteria

full scientific name: Klebsiella pneumoniae (Schroeter 1886) Trevisan 1887 (Approved Lists 1980)

genus: Klebsiella

species: Klebsiella pneumoniae

synonym: Hyalococcus pneumoniae


description: domain/bacteria

full scientific name: Campylobacter fetus (Smith and Taylor 1919) Sebald and Véron 1963 (Approved Lists 1980)

species: Campylobacter fetus

synonym: Vibrio fetus


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Ralstonia pickettii (Ralston et al. 1973) Yabuuchi et al. 1996

genus: Ralstonia

order: Burkholderiales

species: Ralstonia pickettii

synonym: Pseudomonas pickettii

synonym: Burkholderia pickettii

strain designation: Jammet

description: Ralstonia pickettii 16S rRNA gene, strain RAL01, LMG 7160


culture collection no.: CIP A10

description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)

genus: Pseudomonas

species: Pseudomonas aeruginosa

synonym: Pseudomonas paraeruginosa

synonym: Bacterium aeruginosum

strain designation: pyocyanique race F


culture collection no.: CIP A25

description: domain/bacteria

family: Bacillaceae

full scientific name: Bacillus cereus Frankland and Frankland 1887 (Approved Lists 1980)

species: Bacillus cereus


description: domain/bacteria

family: Clostridiaceae

full scientific name: Clostridium perfringens (Veillon and Zuber 1898) Hauduroy et al. 1937 (Approved Lists 1980)

genus: Clostridium

order: Eubacteriales

species: Clostridium perfringens

synonym: Clostridioides perfringens

synonym: Bacillus perfringens


Matching level: strain

class: Alphaproteobacteria

description: domain/bacteria

family: Acetobacteraceae

full scientific name: Komagataeibacter saccharivorans (Lisdiyanti et al. 2006) Yamada et al. 2013

genus: Komagataeibacter

order: Rhodospirillales

species: Komagataeibacter saccharivorans

synonym: Komagatabacter saccharivorans

synonym: Gluconacetobacter saccharivorans

description: Gluconacetobacter saccharivorans gene for 16S rRNA, partial sequence, strain: LMG 1582

description: Gluconacetobacter saccharivorans gene for 16S rRNA, partial sequence, strain: JCM 25121

description: Gluconacetobacter saccharivorans 16S rRNA gene, type strain LMG 1582T

description: Gluconacetobacter saccharivorans strain LMG 1582 16S ribosomal RNA gene, partial sequence.

description: ASM320782v1 assembly for Komagataeibacter saccharivorans LMG 1582

description: ASM2599455v1 assembly for Komagataeibacter saccharivorans NRIC 0614


culture collection no.: CIP A28

description: domain/bacteria


description: domain/bacteria

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

species: Escherichia coli

synonym: Bacillus coli


description: domain/bacteria

family: Yersiniaceae

full scientific name: Yersinia enterocolitica (Schleifstein and Coleman 1939) Frederiksen 1964 (Approved Lists 1980)

genus: Yersinia

species: Yersinia enterocolitica

synonym: Bacterium enterocoliticum


culture collection no.: CIP A85

description: domain/bacteria

family: Actinomycetaceae

full scientific name: Trueperella pyogenes (Glage 1903) Yassin et al. 2011

genus: Trueperella

species: Trueperella pyogenes

synonym: Actinomyces pyogenes

synonym: Corynebacterium pyogenes

synonym: Arcanobacterium pyogenes

synonym: Bacillus pyogenes


description: domain/bacteria

full scientific name: Citrobacter youngae Brenner et al. 1993

genus: Citrobacter

species: Citrobacter youngae


description: domain/bacteria

full scientific name: Serratia ureilytica Bhadra et al. 2005

genus: Serratia

species: Serratia ureilytica


description: domain/bacteria

full scientific name: Serratia nevei Cho et al. 2020

species: Serratia nevei

strain designation: HOM SH59


description: domain/bacteria

family: Morganellaceae

full scientific name: Proteus mirabilis Hauser 1885 (Approved Lists 1980)

genus: Proteus

species: Proteus mirabilis


culture collection no.: CIP A86

description: domain/bacteria


description: domain/bacteria

family: Rhizobiaceae

full scientific name: Agrobacterium larrymoorei Bouzar and Jones 2001

genus: Agrobacterium

order: Hyphomicrobiales

species: Agrobacterium larrymoorei

synonym: Rhizobium larrymoorei

description: Agrobacterium larrymoorei strain ATCC 51759 16S ribosomal RNA gene, partial sequence.

description: ASM514504v1 assembly for Agrobacterium larrymoorei CFBP5473

description: ASM51858v1 assembly for Agrobacterium larrymoorei AF3.10 = ATCC 51759


description: domain/bacteria

strain designation: Mich 7


description: domain/bacteria

full scientific name: Pseudomonas rhodesiae Coroler et al. 1997

order: Pseudomonadales

species: Pseudomonas rhodesiae


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces hygroscopicus (Jensen 1931) Yüntsen et al. 1956 (Approved Lists 1980)

genus: Streptomyces

species: Streptomyces hygroscopicus

synonym: Streptomyces endus

synonym: Actinomyces hygroscopicus

description: Streptomyces hygroscopicus subsp. crystallogenes gene for 16S rRNA, partial sequence, strain: NBRC 16551


description: domain/bacteria

family: Shewanellaceae

full scientific name: Shewanella livingstonensis Bozal et al. 2002

genus: Shewanella

order: Alteromonadales

species: Shewanella livingstonensis

description: Shewanella livingstonensis strain LMG 19866 16S ribosomal RNA gene, partial sequence.

description: ASM385539v1 assembly for Shewanella livingstonensis LMG 19866


description: domain/bacteria

family: Nocardiaceae

full scientific name: Rhodococcus erythropolis (Gray and Thornton 1928) Goodfellow and Alderson 1979 (Approved Lists 1980)

genus: Rhodococcus

order: Mycobacteriales

species: Rhodococcus erythropolis

synonym: Rhodococcus jialingiae

synonym: Rhodococcus degradans

synonym: Rhodococcus qingshengii

synonym: Nocardia erythropolis

synonym: Rhodococcus enclensis

synonym: Mycobacterium erythropolis

synonym: Rhodococcus baikonurensis

synonym: Nocardia calcarea

synonym: Arthrobacter picolinophilus

strain designation: TA 57


description: domain/bacteria

family: Moraxellaceae

full scientific name: Moraxella nonliquefaciens (Scarlett 1916) Lwoff 1939 (Approved Lists 1980)

genus: Moraxella

species: Moraxella nonliquefaciens


description: domain/bacteria

family: Cryomorphaceae

full scientific name: Cryomorpha ignava Bowman et al. 2003

genus: Cryomorpha

species: Cryomorpha ignava

description: UTAS_Cryign_v1.0 assembly for Cryomorpha ignava QSSC 1-22


description: domain/bacteria

family: Crocinitomicaceae

full scientific name: Brumimicrobium glaciale Bowman et al. 2003

genus: Brumimicrobium

species: Brumimicrobium glaciale

description: Brumimicrobium glaciale strain ACAM 645 16S ribosomal RNA gene, partial sequence.

description: ASM415293v1 assembly for Brumimicrobium glaciale IC156


culture collection no.: CIP A114

description: domain/bacteria

family: Pasteurellaceae

full scientific name: Pasteurella multocida (Lehmann and Neumann 1899) Rosenbusch and Merchant 1939 (Approved Lists 1980)

genus: Pasteurella

species: Pasteurella multocida

synonym: Bacterium multocidum

synonym: Micrococcus gallicidus

synonym: Pasteurella gallicida


description: domain/bacteria

full scientific name: Ectobacillus funiculus (Ajithkumar et al. 2002) Gupta et al. 2020

genus: Ectobacillus

order: Caryophanales

species: Ectobacillus funiculus

synonym: Bacillus funiculus

genus: Bacillus

species: Bacillus funiculus


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium diphtheriae (Kruse 1886) Lehmann and Neumann 1896 (Approved Lists 1980)

genus: Corynebacterium

species: Corynebacterium diphtheriae

synonym: Bacillus diphtheriae


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987

genus: Salmonella

species: Salmonella enterica

synonym: Bacillus typhimurium

synonym: Bacillus enteritidis

synonym: Salmonella enteritidis

synonym: Salmonella paratyphi

synonym: Salmonella typhi

synonym: Salmonella typhimurium

synonym: Bacillus typhi

synonym: Bacillus choleraesuis

synonym: Salmonella choleraesuis

description: PA145 assembly for Salmonella enterica subsp. enterica serovar Paratyphi A


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Burkholderia tropicalis Magalhães Cruz et al. 2001

genus: Burkholderia

species: Burkholderia tropicalis


description: domain/bacteria

family: Alcaligenaceae

full scientific name: Bordetella parapertussis (Eldering and Kendrick 1938) Moreno-López 1952 (Approved Lists 1980)

genus: Bordetella

species: Bordetella parapertussis

synonym: Bacillus parapertussis


class: Bacteroidia

description: domain/bacteria

family: Prevotellaceae

full scientific name: <I>Candidatus</I> Prevotella massiliensis Drancourt et al. 2004

genus: Prevotella

order: Bacteroidales

species: Prevotella massiliensis

synonym: Prevotella massiliensis


description: domain/bacteria

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

species: Escherichia coli

synonym: Bacillus coli


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Stutzerimonas stutzeri (Lehmann and Neumann 1896) Lalucat et al. 2022

genus: Stutzerimonas

species: Stutzerimonas stutzeri

synonym: Bacterium stutzeri

synonym: Pseudomonas stutzeri

genus: Pseudomonas

species: Pseudomonas stutzeri

description: ASM26754v1 assembly for Stutzerimonas stutzeri CCUG 29243


description: domain/bacteria

description: ASM289095v1 assembly for Stutzerimonas decontaminans ST27MN3


description: domain/bacteria

family: Bartonellaceae

full scientific name: Bartonella rattimassiliensis Gundi et al. 2004

genus: Bartonella

species: Bartonella rattimassiliensis


description: domain/bacteria

family: Bacillaceae

full scientific name: Terribacillus saccharophilus An et al. 2007

genus: Terribacillus

species: Terribacillus saccharophilus

synonym: Pelagibacillus goriensis

synonym: Terribacillus goriensis


culture collection no.: CIP A91

description: domain/bacteria

family: Actinomycetaceae

full scientific name: Trueperella pyogenes (Glage 1903) Yassin et al. 2011

genus: Trueperella

species: Trueperella pyogenes

synonym: Actinomyces pyogenes

synonym: Corynebacterium pyogenes

synonym: Arcanobacterium pyogenes

synonym: Bacillus pyogenes


description: domain/bacteria

family: Vibrionaceae

full scientific name: Vibrio gallicus Sawabe et al. 2004

genus: Vibrio

order: Vibrionales

species: Vibrio gallicus

description: Vibrio gallicus strain CIP 107864 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Vibrio gallicus strain CIP 107865 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Comamonadaceae

full scientific name: Giesbergeria anulus (Williams and Rittenberg 1957) Grabovich et al. 2006

genus: Giesbergeria

species: Giesbergeria anulus

synonym: Aquaspirillum anulus

synonym: Spirillum anulus

description: Aquaspirillum anulus gene for 16S rRNA, partial sequence

description: Giesbergeria anulus gene for 16S rRNA, partial sequence, strain: NBRC 14917.

description: IMG-taxon 2597490351 annotated assembly for Giesbergeria anulus ATCC 35958


description: domain/bacteria

family: Peptostreptococcaceae

full scientific name: Clostridioides difficile (Hall and O'Toole 1935) Lawson et al. 2016

genus: Clostridioides

order: Peptostreptococcales

species: Clostridioides difficile

synonym: Peptoclostridium difficile

synonym: Bacillus difficilis

synonym: Clostridium difficile

description: ASM8522v1 assembly for Clostridioides difficile CD196

assembly level: chromosome

description: cdeaa assembly for Clostridioides difficile CIP 107932

description: ASM44960v2 assembly for Clostridioides difficile CD196

description: ASM2137841v1 assembly for Clostridioides difficile CD196


family: Not assigned to family

genus: Mycobacterium

order: Not assigned to order

species: Mycobacterium reunionae


culture collection no.: CIP A92

description: domain/bacteria

order: Actinomycetales

strain designation: Géo


description: domain/bacteria

family: Moraxellaceae

full scientific name: Moraxella lacunata (Eyre 1900) Lwoff 1939 (Approved Lists 1980)

genus: Moraxella

species: Moraxella lacunata

synonym: Bacillus lacunatus


description: domain/bacteria

family: Rhizobiaceae

full scientific name: Ensifer meliloti (Dangeard 1926) Young 2003

genus: Ensifer

species: Ensifer meliloti

synonym: Sinorhizobium kummerowiae

synonym: Rhizobium meliloti

synonym: Sinorhizobium meliloti

synonym: Ensifer kummerowiae

species: Ensifer kummerowiae

description: Sinorhizobium kummerowiae strain CCBAU 71714 16S ribosomal RNA gene, partial sequence.

description: Sinorhizobium kummerowiae 16S ribosomal RNA gene, partial sequence.

description: ASM3532684v1 assembly for Sinorhizobium kummerowiae CIP 108026

description: ASM3006458v1 assembly for Sinorhizobium kummerowiae CCBAU 71714


description: domain/bacteria

family: Nitrobacteraceae

full scientific name: Bradyrhizobium yuanmingense Yao et al. 2002

genus: Bradyrhizobium

species: Bradyrhizobium yuanmingense

family: Bradyrhizobiaceae

description: Bradyrhizobium yuanmingense strain CCBAU 10071 16S-23S intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence.

description: IMG-taxon 2617270741 annotated assembly for Bradyrhizobium yuanmingense CCBAU 10071


culture collection no.: CIP 108072, YIM KN2

genus: Halobacillus

species: Halobacillus opalescens


class: Spirochaetia

description: domain/bacteria

family: Treponemataceae

full scientific name: Treponema socranskii Smibert et al. 1984

genus: Treponema

keyword: phylum/spirochaetota

order: Spirochaetales

phylum: Spirochaetota

species: Treponema socranskii

phylum: Spirochaetes

description: ASM5093801v1 assembly for Treponema socranskii ATCC 700335 (OMZ 682)


species: Treponema agilis


description: domain/bacteria

family: Clostridiaceae

full scientific name: Clostridium tetanomorphum (ex Bulloch et al. 1919) Wilde et al. 1989

genus: Clostridium

species: Clostridium tetanomorphum


genus: Paenibacillus

species: Paenibacillus lolii


species: Paenibacillus salicis


description: domain/bacteria

family: Bacteroidaceae

full scientific name: Bacteroides ovatus Eggerth and Gagnon 1933 (Approved Lists 1980)

genus: Bacteroides

species: Bacteroides ovatus

synonym: Bacteroides koreensis

synonym: Bacteroides kribbi


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces scabiei corrig. (ex Thaxter 1891) Lambert and Loria 1989

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces scabiei

synonym: Streptomyces scabies

order: Streptomycetales


genus: Afipia

species: Afipia saintantoinensis


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Paenibacillus koreensis Chung et al. 2000

species: Paenibacillus koreensis

description: Paenibacillus koreensis 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Segniliparaceae

full scientific name: Segniliparus rotundus Butler et al. 2005

genus: Segniliparus

species: Segniliparus rotundus


description: domain/bacteria

family: Microbacteriaceae

full scientific name: Microcella putealis Tiago et al. 2005

genus: Microcella

order: Micrococcales

species: Microcella putealis


description: domain/bacteria

family: Micrococcaceae

full scientific name: Micrococcus luteus (Schroeter 1872) Cohn 1872 (Approved Lists 1980)

genus: Micrococcus

species: Micrococcus luteus

synonym: Micrococcus yunnanensis

synonym: Bacteridium luteum

synonym: Micrococcus aloeverae


genus: Halomonas

species: Halomonas phocea


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

order: Enterobacterales

species: Escherichia coli

synonym: Bacillus coli

strain designation: DH5? ?pir


description: domain/bacteria

family: Shewanellaceae

full scientific name: Shewanella decolorationis Xu et al. 2005

genus: Shewanella

species: Shewanella decolorationis

description: Shewanella decolorationis partial 16S rRNA gene, type strain CCTCC M 203093T

description: Shewanella decolorationis gene for 16S rRNA, partial sequence, strain: NBRC 103170.

description: ASM3016049v1 assembly for Shewanella decolorationis NBRC 103170


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Flavobacterium psychrophilum (Bernardet and Grimont 1989 ex Borg 1960) Bernardet et al. 1996

genus: Flavobacterium

order: Flavobacteriales

species: Flavobacterium psychrophilum

synonym: Cytophaga psychrophila

synonym: Flexibacter psychrophilus

description: JIP08_99 assembly for Flavobacterium psychrophilum JIP 08/99


culture collection no.: CIP A93

description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium pseudotuberculosis (Buchanan 1911) Eberson 1918 (Approved Lists 1980)

genus: Corynebacterium

species: Corynebacterium pseudotuberculosis

synonym: Bacillus pseudotuberculosis


description: domain/bacteria

family: Bacillaceae

full scientific name: Bacillus subtilis (Ehrenberg 1835) Cohn 1872 (Approved Lists 1980)

genus: Bacillus

species: Bacillus subtilis

synonym: Vibrio subtilis

strain designation: AA 56


description: domain/bacteria

family: Alcanivoracaceae

full scientific name: Alcanivorax venustensis Fernández-Martínez et al. 2003

genus: Alcanivorax

order: Oceanospirillales

species: Alcanivorax venustensis

synonym: Alloalcanivorax venustensis


description: domain/bacteria

family: Peptostreptococcaceae

full scientific name: Clostridioides difficile (Hall and O'Toole 1935) Lawson et al. 2016

genus: Clostridioides

species: Clostridioides difficile

synonym: Peptoclostridium difficile

synonym: Bacillus difficilis

synonym: Clostridium difficile

order: Eubacteriales


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium rutilum Hennessee et al. 2009

genus: Mycobacterium

species: Mycobacterium rutilum

synonym: Mycolicibacterium rutilum


description: domain/bacteria

family: Peptoniphilaceae

full scientific name: <I>Candidatus</I> Anaerococcus massiliensis Fenollar et al. 2006

genus: Anaerococcus

order: Tissierellales

species: Anaerococcus massiliensis


description: domain/bacteria

family: Moraxellaceae

full scientific name: Acinetobacter baumannii Bouvet and Grimont 1986

genus: Acinetobacter

order: Pseudomonadales

species: Acinetobacter baumannii

description: Acin_baum_NIPH_70_V1 assembly for Acinetobacter baumannii NIPH 70


description: domain/bacteria

full scientific name: Priestia megaterium (de Bary 1884) Gupta et al. 2020

genus: Priestia

species: Priestia megaterium

synonym: Bacillus megaterium

species: Bacillus megaterium

strain designation: Ma


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Azotobacter chroococcum Beijerinck 1901 (Approved Lists 1980)

genus: Azotobacter

species: Azotobacter chroococcum

strain designation: Ag


description: domain/bacteria

full scientific name: Bacillus cereus Frankland and Frankland 1887 (Approved Lists 1980)

species: Bacillus cereus


description: domain/bacteria

family: Weeksellaceae

full scientific name: Chryseobacterium indologenes (Yabuuchi et al. 1983) Vandamme et al. 1994

genus: Chryseobacterium

species: Chryseobacterium indologenes

synonym: Flavobacterium indologenes

strain designation: Carton


Matching level: subspecies

description: domain/bacteria

full scientific name: Chryseobacterium aquaticum subsp. greenlandense (Loveland-Curtze et al. 2010) García-López et al. 2020

synonym: Chryseobacterium greenlandense

species: Chryseobacterium greenlandense

description: ASM150732v1 assembly for Chryseobacterium aquaticum subsp. greenlandense UMB34


description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus faecalis (Andrewes and Horder 1906) Schleifer and Kilpper-Bälz 1984

genus: Enterococcus

order: Lactobacillales

species: Enterococcus faecalis

synonym: Streptococcus faecalis


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Enterocloster clostridioformis (Burri and Ankersmit 1906) Haas and Blanchard 2020

genus: Enterocloster

species: Enterocloster clostridioformis

synonym: Clostridium clostridioforme

synonym: Bacteroides clostridiiformis

synonym: Bacterium clostridiiforme

synonym: Clostridium clostridiiforme

family: Clostridiaceae

genus: Clostridium

species: Clostridium clostridioforme


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lactobacillus gasseri Lauer and Kandler 1980

genus: Lactobacillus

species: Lactobacillus gasseri


description: domain/bacteria

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

species: Escherichia coli

synonym: Bacillus coli


description: domain/bacteria

full scientific name: Acinetobacter parvus Nemec et al. 2003

species: Acinetobacter parvus


description: domain/bacteria

description: Acin_baum_NIPH_146_V1 assembly for Acinetobacter baumannii NIPH 146


description: domain/bacteria

description: Acin_baum_NIPH_190_V1 assembly for Acinetobacter baumannii NIPH 190


description: domain/bacteria

full scientific name: Acinetobacter lwoffii (Audureau 1940) Brisou and Prévot 1954 (Approved Lists 1980)

species: Acinetobacter lwoffii

synonym: Moraxella lwoffi

synonym: Acinetobacter mesopotamicus

description: Acin_lwof_NIPH_478_V1 assembly for Acinetobacter lwoffii NIPH 478


description: domain/bacteria

family: Propionibacteriaceae

full scientific name: Cutibacterium acnes (Gilchrist 1900) Scholz and Kilian 2016

genus: Cutibacterium

order: Propionibacteriales

species: Cutibacterium acnes

synonym: Propionibacterium acnes

synonym: Bacillus acnes


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus salivarius Andrewes and Horder 1906 (Approved Lists 1980)

genus: Streptococcus

species: Streptococcus salivarius


description: domain/bacteria

description: Acin_baum_NIPH_410_V1 assembly for Acinetobacter baumannii NIPH 410


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Shigella boydii Ewing 1949 (Approved Lists 1980)

genus: Shigella

species: Shigella boydii


description: domain/bacteria

full scientific name: Streptococcus pyogenes Rosenbach 1884 (Approved Lists 1980)

species: Streptococcus pyogenes

description: 42969_F01 assembly for Streptococcus pyogenes NCTC8330


description: domain/bacteria


culture collection no.: CIP A106

description: domain/bacteria

family: Listeriaceae

full scientific name: Listeria monocytogenes (Murray et al. 1926) Pirie 1940 (Approved Lists 1980)

genus: Listeria

order: Caryophanales

species: Listeria monocytogenes

synonym: Bacterium monocytogenes


culture collection no.: CIP A109

description: domain/bacteria


description: domain/bacteria

full scientific name: Streptococcus pneumoniae (Klein 1884) Chester 1901 (Approved Lists 1980)

species: Streptococcus pneumoniae

synonym: Micrococcus pneumoniae

synonym: Staphylococcus pneumoniae


description: domain/bacteria

full scientific name: Enterobacter cloacae (Jordan 1890) Hormaeche and Edwards 1960 (Approved Lists 1980)

genus: Enterobacter

species: Enterobacter cloacae

synonym: Bacillus cloacae

synonym: Bacterium cloacae

synonym: Cloaca cloacae


description: domain/bacteria

full scientific name: Geobacillus stearothermophilus (Donk 1920) Nazina et al. 2001

genus: Geobacillus

species: Geobacillus stearothermophilus

synonym: Bacillus stearothermophilus


description: domain/bacteria

family: Bartonellaceae

full scientific name: Bartonella bacilliformis (Strong et al. 1913) Strong et al. 1915 (Approved Lists 1980)

genus: Bartonella

order: Hyphomicrobiales

species: Bartonella bacilliformis

synonym: Bartonia bacilliformis


description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: Gardnerella vaginalis (Gardner and Dukes 1955) Greenwood and Pickett 1980

genus: Gardnerella

order: Bifidobacteriales

species: Gardnerella vaginalis

synonym: Corynebacterium vaginale

synonym: Haemophilus vaginalis


description: domain/bacteria

family: Neisseriaceae

full scientific name: Neisseria meningitidis (Albrecht and Ghon 1901) Murray 1929 (Approved Lists 1980)

genus: Neisseria

order: Neisseriales

species: Neisseria meningitidis

synonym: Micrococcus meningitidis


description: domain/bacteria

full scientific name: Shigella dysenteriae (Shiga 1897) Castellani and Chalmers 1919 (Approved Lists 1980)

species: Shigella dysenteriae

synonym: Bacillus dysentericus

synonym: Escherichia coli subsp. shigellae


description: domain/bacteria

description: ASM3166583v1 assembly for Shigella dysenteriae CIP 58-28


description: domain/bacteria

strain designation: Mana


description: domain/bacteria

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)

genus: Pseudomonas

species: Pseudomonas aeruginosa

synonym: Pseudomonas paraeruginosa

synonym: Bacterium aeruginosum


description: domain/bacteria

family: Morganellaceae

full scientific name: Providencia rustigianii Hickman-Brenner et al. 1983

genus: Providencia

species: Providencia rustigianii

synonym: Providencia friedericiana


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Histophilus somni Angen et al. 2003

genus: Histophilus

order: Pasteurellales

species: Histophilus somni


description: domain/bacteria

family: Campylobacteraceae

full scientific name: Campylobacter fetus (Smith and Taylor 1919) Sebald and Véron 1963 (Approved Lists 1980)

genus: Campylobacter

order: Campylobacterales

species: Campylobacter fetus

synonym: Vibrio fetus

strain designation: Lebeau


description: domain/bacteria

family: Rhizobiaceae

full scientific name: Agrobacterium radiobacter (Beijerinck and van Delden 1902) Conn 1942 (Approved Lists 1980)

genus: Agrobacterium

species: Agrobacterium radiobacter

synonym: Beijerinckia fluminensis

synonym: Bacillus radiobacter

synonym: Rhizobium radiobacter

strain designation: B6 Tr


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas savastanoi (Janse 1982 ex Smith 1908) Gardan et al. 1992

species: Pseudomonas savastanoi

synonym: Pseudomonas syringae subsp. savastanoi

strain designation: CDAO 682


description: domain/bacteria

family: Brevibacteriaceae

full scientific name: Brevibacterium iodinum (ex Davis 1939) Collins et al. 1981

genus: Brevibacterium

species: Brevibacterium iodinum

synonym: Arthrobacter iodinum

description: 55312_A01 assembly for Brevibacterium iodinum NCTC9742


culture collection no.: CIP A124

class: Erysipelotrichia

description: domain/bacteria

family: Erysipelotrichaceae

full scientific name: Erysipelothrix rhusiopathiae (Migula 1900) Buchanan 1918 (Approved Lists 1980)

genus: Erysipelothrix

order: Erysipelotrichales

species: Erysipelothrix rhusiopathiae

synonym: Bacterium rhusiopathiae


description: domain/bacteria

full scientific name: Neisseria mucosa Véron et al. 1959 (Approved Lists 1980)

species: Neisseria mucosa


description: domain/bacteria

strain designation: Pat


description: domain/bacteria

family: Microbacteriaceae

full scientific name: Microbacterium oxydans (Chatelain and Second 1966) Schumann et al. 1999

genus: Microbacterium

species: Microbacterium oxydans

synonym: Brevibacterium oxydans


description: domain/bacteria

family: Peptostreptococcaceae

full scientific name: Paraclostridium bifermentans (Weinberg and Séguin 1918) Sasi Jyothsna et al. 2016

genus: Paraclostridium

order: Peptostreptococcales

species: Paraclostridium bifermentans

synonym: Bacillus bifermentans

synonym: Clostridium bifermentans

family: Clostridiaceae

strain designation: Tissier

description: Paraclostridium bifermentans gene for 16S ribosomal RNA, partial sequence, strain: JCM 7832

description: ASM45222v2 assembly for Paraclostridium bifermentans ATCC 19299


description: domain/bacteria

full scientific name: Clostridium haemolyticum corrig. (Hall 1929) Scott et al. 1935 (Approved Lists 1980)

genus: Clostridium

species: Clostridium haemolyticum

synonym: Clostridium hemolyticum

synonym: Bacillus hemolyticus


description: domain/bacteria

full scientific name: Clostridium septicum (Macé 1889) Ford 1927 (Approved Lists 1980)

species: Clostridium septicum

synonym: Bacillus septicus

strain designation: chevaux


description: domain/bacteria

full scientific name: Clostridium novyi (Migula 1900) Bergey et al. 1923 (Approved Lists 1980)

species: Clostridium novyi

synonym: Bacillus novyi


description: domain/bacteria

full scientific name: Pseudomonas fragi (Eichholz 1902) Gruber 1905 (Approved Lists 1980)

species: Pseudomonas fragi

synonym: Bacterium fragi


description: domain/bacteria

full scientific name: Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987

genus: Salmonella

species: Salmonella enterica

synonym: Salmonella choleraesuis

synonym: Bacillus typhimurium

synonym: Salmonella enteritidis

synonym: Salmonella paratyphi

synonym: Salmonella typhi

synonym: Bacillus enteritidis

synonym: Bacillus typhi

synonym: Bacillus choleraesuis

synonym: Salmonella typhimurium


description: domain/bacteria

strain designation: mutant try 3


description: domain/bacteria

strain designation: mutant try 4


description: domain/bacteria

full scientific name: Klebsiella pneumoniae (Schroeter 1886) Trevisan 1887 (Approved Lists 1980)

genus: Klebsiella

species: Klebsiella pneumoniae

synonym: Hyalococcus pneumoniae


description: domain/bacteria

full scientific name: Haemophilus parahaemolyticus Pittman 1953 (Approved Lists 1980)

genus: Haemophilus

species: Haemophilus parahaemolyticus

synonym: Pseudohaemophilus parahaemolyticus

strain designation: Volle


description: domain/bacteria

family: Alcaligenaceae

full scientific name: Bordetella parapertussis (Eldering and Kendrick 1938) Moreno-López 1952 (Approved Lists 1980)

genus: Bordetella

order: Burkholderiales

species: Bordetella parapertussis

synonym: Bacillus parapertussis


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Paenibacillus larvae (White 1906) Ash et al. 1994

genus: Paenibacillus

species: Paenibacillus larvae

synonym: Bacillus larvae

synonym: Paenibacillus pulvifaciens

synonym: Bacillus pulvifaciens

synonym: Paenibacillus larvae subsp. pulvifaciens


description: domain/bacteria

family: Vibrionaceae

full scientific name: Vibrio cholerae Pacini 1854 (Approved Lists 1980)

genus: Vibrio

order: Vibrionales

species: Vibrio cholerae

synonym: Vibrio albensis


description: domain/bacteria


description: domain/bacteria

family: Moraxellaceae

full scientific name: Acinetobacter bereziniae Nemec et al. 2010

genus: Acinetobacter

species: Acinetobacter bereziniae

description: Acin_bere_NIPH_3_V1 assembly for Acinetobacter bereziniae NIPH 3


description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus durans (ex Sherman and Wing 1937) Collins et al. 1984

genus: Enterococcus

species: Enterococcus durans

synonym: Streptococcus durans


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Shigella sonnei (Levine 1920) Weldin 1927 (Approved Lists 1980)

genus: Shigella

order: Enterobacterales

species: Shigella sonnei

synonym: Bacterium sonnei


description: domain/bacteria

family: Aeromonadaceae

full scientific name: Aeromonas salmonicida (Lehmann and Neumann 1896) Griffin et al. 1953 (Approved Lists 1980)

genus: Aeromonas

order: Aeromonadales

species: Aeromonas salmonicida

synonym: Bacterium salmonicida

description: Aeromonas salmonicida JCM 8062 gene for 16S ribosomal RNA, partial sequence

description: 53550_E01 assembly for Aeromonas salmonicida NCTC10402


description: domain/bacteria

full scientific name: Pseudomonas fluorescens Migula 1895 (Approved Lists 1980)

genus: Pseudomonas

species: Pseudomonas fluorescens


description: domain/bacteria

family: Comamonadaceae

full scientific name: Comamonas terrigena (ex Hugh 1962) De Vos et al. 1985

genus: Comamonas

species: Comamonas terrigena

synonym: Pseudomonas terrigena

synonym: Comamonas terrigena

synonym: Comamonas percolans

description: Comamonas terrigena gene for 16S rRNA, partial sequence, strain: JCM 6235

description: Comamonas terrigena partial 16S rRNA gene, strain LMG 1249


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Actinobacillus equuli (van Straaten 1918) Haupt 1934 (Approved Lists 1980)

genus: Actinobacillus

species: Actinobacillus equuli

synonym: Bacillus equuli


description: domain/bacteria

family: Nitrobacteraceae

full scientific name: Bradyrhizobium lupini Peix et al. 2015

genus: Bradyrhizobium

species: Bradyrhizobium lupini

family: Bradyrhizobiaceae


description: domain/bacteria

full scientific name: Aggregatibacter aphrophilus (Khairat 1940) Nørskov-Lauritsen and Kilian 2006

genus: Aggregatibacter

species: Aggregatibacter aphrophilus

synonym: Haemophilus paraphrophilus

synonym: Haemophilus aphrophilus

strain designation: X100, Caraton


description: domain/bacteria

full scientific name: Moraxella nonliquefaciens (Scarlett 1916) Lwoff 1939 (Approved Lists 1980)

genus: Moraxella

species: Moraxella nonliquefaciens


description: domain/bacteria

full scientific name: Acinetobacter baumannii Bouvet and Grimont 1986

species: Acinetobacter baumannii

description: Acin_baum_NIPH_528_V1 assembly for Acinetobacter baumannii NIPH 528

description: ASM4505617v1 assembly for Acinetobacter baumannii RUH 134


description: domain/bacteria

full scientific name: Moraxella bovis (Hauduroy et al. 1937) Murray 1948 (Approved Lists 1980)

species: Moraxella bovis

synonym: Haemophilus bovis


culture collection no.: CIP A156, NCTC 6816

description: domain/bacteria

family: Bacillaceae

full scientific name: Bacillus licheniformis (Weigmann 1898) Chester 1901 (Approved Lists 1980)

genus: Bacillus

species: Bacillus licheniformis

synonym: Clostridium licheniforme

description: ASM783203v1 assembly for Bacillus licheniformis NCTC 6816


description: domain/bacteria

full scientific name: Delftia acidovorans (den Dooren de Jong 1926) Wen et al. 1999

genus: Delftia

species: Delftia acidovorans

synonym: Comamonas acidovorans

synonym: Pseudomonas acidovorans

description: Delftia acidovorans gene for 16S rRNA, partial sequence, strain: NBRC 13582.

description: Delftia acidovorans ATCC:9355 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980)

genus: Staphylococcus

species: Staphylococcus aureus

synonym: Staphylococcus aureus subsp. anaerobius

synonym: Staphylococcus roterodami


description: domain/bacteria

full scientific name: Psychrobacter phenylpyruvicus (Bøvre and Henriksen 1967) Bowman et al. 1996

genus: Psychrobacter

species: Psychrobacter phenylpyruvicus

synonym: Moraxella phenylpyruvica


class: Oligoflexia

description: domain/bacteria

family: Pseudobdellovibrionaceae

full scientific name: Bdellovibrio bacteriovorus Stolp and Starr 1963 (Approved Lists 1980)

genus: Bdellovibrio

order: Bdellovibrionales

species: Bdellovibrio bacteriovorus

class: Deltaproteobacteria

family: Bdellovibrionaceae


description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: Bifidobacterium breve Reuter 1963 (Approved Lists 1980)

genus: Bifidobacterium

species: Bifidobacterium breve


description: domain/bacteria

description: 41665_B01 assembly for Staphylococcus aureus NCTC6131


description: domain/bacteria

strain designation: MS 69

description: 40798_D01 assembly for Staphylococcus aureus NCTC6134


description: domain/bacteria

full scientific name: Klebsiella oxytoca (Flügge 1886) Lautrop 1956 (Approved Lists 1980)

genus: Klebsiella

species: Klebsiella oxytoca

synonym: Bacillus oxytocus

strain designation: Sobeaut


description: domain/bacteria

strain designation: Belloni


description: domain/bacteria

full scientific name: Actinobacillus ureae (Jones 1962) Mutters et al. 1986

species: Actinobacillus ureae

synonym: Pasteurella ureae

strain designation: Martin


description: domain/bacteria

full scientific name: Pasteurella haemolytica corrig. Newsom and Cross 1932 (Approved Lists 1980)

genus: Pasteurella

species: Pasteurella haemolytica

synonym: Pasteurella hemolytica

synonym: Mannheimia haemolytica

genus: Mannheimia

species: Mannheimia haemolytica


description: domain/bacteria

family: Promicromonosporaceae

full scientific name: Cellulosimicrobium cellulans (Metcalfe and Brown 1957) Schumann et al. 2001

genus: Cellulosimicrobium

order: Micrococcales

species: Cellulosimicrobium cellulans

synonym: Brevibacterium lyticum

synonym: Nocardia cellulans

synonym: Cellulomonas cellulans

synonym: Cellulomonas cartalyticum

synonym: Brevibacterium fermentans

synonym: Oerskovia xanthineolytica

synonym: Cellulomonas cartae


description: domain/bacteria

full scientific name: Actinobacillus suis van Dorssen and Jaartsveld 1962 (Approved Lists 1980)

species: Actinobacillus suis


description: domain/bacteria

family: Hafniaceae

full scientific name: Hafnia alvei Møller 1954 (Approved Lists 1980)

genus: Hafnia

species: Hafnia alvei

strain designation: mutant 11


description: domain/bacteria

strain designation: mutant 2


culture collection no.: CIP A172

description: domain/bacteria

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

species: Escherichia coli

synonym: Bacillus coli


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus thermophilus Orla-Jensen 1919 (Approved Lists 1980)

genus: Streptococcus

species: Streptococcus thermophilus

synonym: Streptococcus salivarius subsp. thermophilus

strain designation: TJ


description: domain/bacteria

full scientific name: Shigella flexneri Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Shigella

species: Shigella flexneri

strain designation: Bagdad 30/66


class: Betaproteobacteria

description: domain/bacteria

family: Neisseriaceae

full scientific name: Kingella kingae (Henriksen and Bøvre 1968) Henriksen and Bøvre 1976 (Approved Lists 1980)

genus: Kingella

species: Kingella kingae

synonym: Moraxella kingii

description: ASM1161270v1 assembly for Kingella kingae ATCC 23331


description: domain/bacteria


description: domain/bacteria

family: Listeriaceae

full scientific name: Brochothrix thermosphacta (McLean and Sulzbacher 1953) Sneath and Jones 1976 (Approved Lists 1980)

genus: Brochothrix

species: Brochothrix thermosphacta

synonym: Microbacterium thermosphactum


description: domain/bacteria

synonym: Staphylococcus aureus subsp. anaerobius

synonym: Staphylococcus roterodami


description: domain/bacteria

family: Vibrionaceae

full scientific name: Vibrio metschnikovii Gamaleia 1888 (Approved Lists 1980)

genus: Vibrio

species: Vibrio metschnikovii

description: 52592_B01 assembly for Vibrio metschnikovii NCTC8563


culture collection no.: CIP A186

description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus faecalis (Andrewes and Horder 1906) Schleifer and Kilpper-Bälz 1984

genus: Enterococcus

species: Enterococcus faecalis

synonym: Streptococcus faecalis

strain designation: T


description: domain/bacteria

family: Shewanellaceae

full scientific name: Shewanella putrefaciens (Lee et al. 1981 ex Derby and Hammer 1931) MacDonell and Colwell 1986

genus: Shewanella

order: Alteromonadales

species: Shewanella putrefaciens

synonym: Alteromonas putrefaciens


description: domain/bacteria

full scientific name: Shewanella baltica Ziemke et al. 1998

species: Shewanella baltica


description: domain/bacteria

full scientific name: Photobacterium leiognathi Boisvert et al. 1967 (Approved Lists 1980)

genus: Photobacterium

species: Photobacterium leiognathi

description: Photobacterium leiognathi ATCC 25587 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Campylobacteraceae

full scientific name: Campylobacter fetus (Smith and Taylor 1919) Sebald and Véron 1963 (Approved Lists 1980)

genus: Campylobacter

species: Campylobacter fetus

synonym: Vibrio fetus


description: domain/bacteria

full scientific name: Campylobacter fetus subsp. venerealis (Florent 1959) Véron and Chatelain 1973 (Approved Lists 1980)

species: Campylobacter fetus subsp. venerealis

synonym: Vibrio fetus subsp. venerealis


description: domain/bacteria

family: Moraxellaceae

full scientific name: Acinetobacter haemolyticus (ex Stenzel and Mannheim 1963) Bouvet and Grimont 1986

genus: Acinetobacter

order: Pseudomonadales

species: Acinetobacter haemolyticus


description: domain/bacteria

full scientific name: Acinetobacter baumannii Bouvet and Grimont 1986

species: Acinetobacter baumannii


description: domain/bacteria

full scientific name: Acinetobacter johnsonii Bouvet and Grimont 1986

species: Acinetobacter johnsonii

synonym: Acinetobacter oryzae


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987

genus: Salmonella

species: Salmonella enterica

synonym: Bacillus typhimurium

synonym: Bacillus enteritidis

synonym: Salmonella enteritidis

synonym: Salmonella paratyphi

synonym: Salmonella typhi

synonym: Salmonella typhimurium

synonym: Bacillus typhi

synonym: Bacillus choleraesuis

synonym: Salmonella choleraesuis


description: domain/bacteria

full scientific name: Moraxella nonliquefaciens (Scarlett 1916) Lwoff 1939 (Approved Lists 1980)

genus: Moraxella

species: Moraxella nonliquefaciens


description: domain/bacteria

full scientific name: Moraxella lacunata (Eyre 1900) Lwoff 1939 (Approved Lists 1980)

species: Moraxella lacunata

synonym: Bacillus lacunatus

description: Moraxella lacunata 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Lactococcus lactis (Lister 1873) Schleifer et al. 1986

genus: Lactococcus

order: Lactobacillales

species: Lactococcus lactis

synonym: Lactobacillus xylosus

synonym: Bacterium lactis

synonym: Streptococcus lactis

synonym: Streptococcus lactis subsp. diacetilactis

strain designation: N34, RICE


description: domain/bacteria

full scientific name: Vibrio alginolyticus (Miyamoto et al. 1961) Sakazaki 1968 (Approved Lists 1980)

species: Vibrio alginolyticus

synonym: Beneckea alginolytica

synonym: Oceanomonas alginolytica


description: domain/bacteria

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

species: Escherichia coli

synonym: Bacillus coli


class: Mollicutes

description: domain/bacteria

family: Mycoplasmoidaceae

full scientific name: Mycoplasmoides gallisepticum (Edward and Kanarek 1960) Gupta et al. 2018

genus: Mycoplasmoides

keyword: phylum/mycoplasmatota

order: Mycoplasmoidales

phylum: Mycoplasmatota

species: Mycoplasmoides gallisepticum

synonym: Mycoplasma gallisepticum

genus: Mycoplasma

phylum: Tenericutes

species: Mycoplasma gallisepticum


description: domain/bacteria

full scientific name: Shewanella algae corrig. Simidu et al. 1990

species: Shewanella algae

synonym: Shewanella upenei

synonym: Shewanella alga

synonym: Shewanella haliotis


description: domain/bacteria

species: Shewanella putrefaciens

synonym: Alteromonas putrefaciens

strain designation: II 1 Ax


description: domain/bacteria

full scientific name: Kingella kingae (Henriksen and Bøvre 1968) Henriksen and Bøvre 1976 (Approved Lists 1980)

species: Kingella kingae

synonym: Moraxella kingii


description: domain/bacteria

family: Chromobacteriaceae

full scientific name: Chromobacterium violaceum Bergonzini 1880 (Approved Lists 1980)

genus: Chromobacterium

species: Chromobacterium violaceum

synonym: Chromobacterium pseudoviolaceum


description: domain/bacteria

full scientific name: Shigella boydii Ewing 1949 (Approved Lists 1980)

species: Shigella boydii


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Ralstonia pickettii (Ralston et al. 1973) Yabuuchi et al. 1996

genus: Ralstonia

species: Ralstonia pickettii

synonym: Pseudomonas pickettii

synonym: Burkholderia pickettii


description: domain/bacteria

family: Yersiniaceae

full scientific name: Serratia rubidaea (Stapp 1940) Ewing et al. 1973 (Approved Lists 1980)

genus: Serratia

species: Serratia rubidaea

synonym: Serratia marinorubra

synonym: Bacterium rubidaeum


description: domain/bacteria

family: Nocardiaceae

full scientific name: Rhodococcus equi (Magnusson 1923) Goodfellow and Alderson 1977 (Approved Lists 1980)

genus: Rhodococcus

order: Mycobacteriales

species: Rhodococcus equi

synonym: Prescottella equi

synonym: Corynebacterium equi

synonym: Nocardia restricta

synonym: Prescottia equi

synonym: Proactinomyces restrictus


description: domain/bacteria

full scientific name: Neisseria elongata Bøvre and Holten 1970 (Approved Lists 1980)

genus: Neisseria

species: Neisseria elongata


description: domain/bacteria

family: Alcaligenaceae

full scientific name: Oligella urethralis (Lautrop et al. 1970) Rossau et al. 1987

genus: Oligella

species: Oligella urethralis

synonym: Moraxella urethralis


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas mendocina Palleroni 1970 (Approved Lists 1980)

genus: Pseudomonas

species: Pseudomonas mendocina

synonym: Ectopseudomonas mendocina

strain designation: CH 67


description: domain/bacteria

full scientific name: Pseudomonas chlororaphis (Guignard and Sauvageau 1894) Bergey et al. 1930 (Approved Lists 1980)

species: Pseudomonas chlororaphis

synonym: Bacillus chlororaphis


description: domain/bacteria

family: Acholeplasmataceae

full scientific name: Acholeplasma laidlawii (Sabin 1941) Edward and Freundt 1970 (Approved Lists 1980)

genus: Acholeplasma

order: Acholeplasmatales

species: Acholeplasma laidlawii

synonym: Sapromyces laidlawii

synonym: Sapromyces laidlawi

synonym: Mycoplasma laidlawii


description: domain/bacteria

full scientific name: Citrobacter koseri Frederiksen 1970 (Approved Lists 1980)

genus: Citrobacter

species: Citrobacter koseri

synonym: Levinea malonatica

synonym: Citrobacter diversus

synonym: Aerobacter diversum

synonym: Citrobacter diversum


description: domain/bacteria

full scientific name: Neisseria meningitidis (Albrecht and Ghon 1901) Murray 1929 (Approved Lists 1980)

order: Neisseriales

species: Neisseria meningitidis

synonym: Micrococcus meningitidis


description: domain/bacteria

strain designation: LNP N 633, Boshard 6, M 112


culture collection no.: CIP A216

class: Bacilli

description: domain/bacteria

family: Streptococcaceae

full scientific name: Lactococcus lactis (Lister 1873) Schleifer et al. 1986

species: Lactococcus lactis

synonym: Lactobacillus xylosus

synonym: Bacterium lactis

synonym: Streptococcus lactis

synonym: Streptococcus lactis subsp. diacetilactis


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lactobacillus helveticus (Orla-Jensen 1919) Bergey et al. 1925 (Approved Lists 1980)

genus: Lactobacillus

species: Lactobacillus helveticus

synonym: Lactobacillus suntoryeus

synonym: Thermobacterium helveticum

description: Lactobacillus helveticus gene for 16S rRNA, partial sequence, strain: JCM 1003.

description: Lactobacillus helveticus strain LMG 11445 16S-23S ribosomal RNA intergenic spacer, complete sequence.

description: Lactobacillus helveticus strain LMG 11445 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Bacillaceae

full scientific name: Bacillus subtilis (Ehrenberg 1835) Cohn 1872 (Approved Lists 1980)

genus: Bacillus

order: Caryophanales

species: Bacillus subtilis

synonym: Vibrio subtilis


description: domain/bacteria

strain designation: PM 43


culture collection no.: CIP A224

class: Gammaproteobacteria

description: domain/bacteria

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

species: Escherichia coli

synonym: Bacillus coli


description: domain/bacteria

strain designation: FS 32


description: domain/bacteria

strain designation: AA 77


description: domain/bacteria

strain designation: AA 79


description: domain/bacteria

strain designation: AA 92


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus intermedius Hájek 1976 (Approved Lists 1980)

genus: Staphylococcus

species: Staphylococcus intermedius


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Pasteurella multocida (Lehmann and Neumann 1899) Rosenbusch and Merchant 1939 (Approved Lists 1980)

genus: Pasteurella

order: Pasteurellales

species: Pasteurella multocida

synonym: Bacterium multocidum

synonym: Micrococcus gallicidus

synonym: Pasteurella gallicida


class: Actinomycetes

description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium diphtheriae (Kruse 1886) Lehmann and Neumann 1896 (Approved Lists 1980)

genus: Corynebacterium

species: Corynebacterium diphtheriae

synonym: Bacillus diphtheriae


description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: Gardnerella vaginalis (Gardner and Dukes 1955) Greenwood and Pickett 1980

genus: Gardnerella

order: Bifidobacteriales

species: Gardnerella vaginalis

synonym: Corynebacterium vaginale

synonym: Haemophilus vaginalis

class: Actinobacteria


description: domain/bacteria

family: Hafniaceae

full scientific name: Edwardsiella hoshinae Grimont et al. 1981

genus: Edwardsiella

species: Edwardsiella hoshinae


description: domain/bacteria

family: Weeksellaceae

full scientific name: Elizabethkingia meningoseptica (King 1959) Kim et al. 2005

genus: Elizabethkingia

order: Flavobacteriales

species: Elizabethkingia meningoseptica

synonym: Flavobacterium meningosepticum

synonym: Chryseobacterium meningosepticum

family: Flavobacteriaceae

description: Chryseobacterium meningosepticum CIP 79.5 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Enterobacteriaceae


culture collection no.: CIP A241

description: domain/bacteria

full scientific name: Streptococcus pyogenes Rosenbach 1884 (Approved Lists 1980)

genus: Streptococcus

species: Streptococcus pyogenes


description: domain/bacteria

family: Cardiobacteriaceae

full scientific name: Suttonella indologenes (Snell and Lapage 1976) Dewhirst et al. 1990

genus: Suttonella

order: Cardiobacteriales

species: Suttonella indologenes

synonym: Kingella indologenes


description: domain/bacteria

full scientific name: Actinobacillus lignieresii Brumpt 1910 (Approved Lists 1980)

genus: Actinobacillus

species: Actinobacillus lignieresii


culture collection no.: CIP A256

description: domain/bacteria

family: Vibrionaceae

full scientific name: Vibrio cholerae Pacini 1854 (Approved Lists 1980)

genus: Vibrio

order: Vibrionales

species: Vibrio cholerae

synonym: Vibrio albensis

strain designation: B2 (Berne 2)


description: domain/bacteria

family: Listeriaceae

full scientific name: Listeria monocytogenes (Murray et al. 1926) Pirie 1940 (Approved Lists 1980)

genus: Listeria

species: Listeria monocytogenes

synonym: Bacterium monocytogenes


description: domain/bacteria

family: Neisseriaceae

genus: Neisseria

synonym: Micrococcus meningitidis


description: domain/bacteria

full scientific name: Listeria welshimeri Rocourt and Grimont 1983

species: Listeria welshimeri


culture collection no.: CIP A255

description: domain/bacteria

full scientific name: Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987

genus: Salmonella

order: Enterobacterales

species: Salmonella enterica

synonym: Bacillus typhimurium

synonym: Bacillus enteritidis

synonym: Salmonella enteritidis

synonym: Salmonella paratyphi

synonym: Salmonella typhi

synonym: Salmonella typhimurium

synonym: Bacillus typhi

synonym: Bacillus choleraesuis

synonym: Salmonella choleraesuis


description: domain/bacteria

full scientific name: Bacillus licheniformis (Weigmann 1898) Chester 1901 (Approved Lists 1980)

species: Bacillus licheniformis

synonym: Clostridium licheniforme


description: domain/bacteria

full scientific name: Corynebacterium glutamicum (Kinoshita et al. 1958) Abe et al. 1967 (Approved Lists 1980)

species: Corynebacterium glutamicum

synonym: Corynebacterium lilium

synonym: Brevibacterium divaricatum

synonym: Micrococcus glutamicus


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Brevibacillus brevis (Migula 1900) Shida et al. 1996

genus: Brevibacillus

species: Brevibacillus brevis

synonym: Bacillus brevis


description: domain/bacteria

family: Lysobacteraceae

full scientific name: Stenotrophomonas maltophilia (Hugh 1981 ex Hugh and Ryschenkow 1961) Palleroni and Bradbury 1993

genus: Stenotrophomonas

order: Lysobacterales

species: Stenotrophomonas maltophilia

synonym: Stenotrophomonas africana

synonym: Xanthomonas maltophilia

synonym: Pseudomonas maltophilia


description: domain/bacteria

full scientific name: Aggregatibacter actinomycetemcomitans (Klinger 1912) Nørskov-Lauritsen and Kilian 2006

genus: Aggregatibacter

species: Aggregatibacter actinomycetemcomitans

synonym: Actinobacillus actinomycetemcomitans

synonym: Bacterium actinomycetemcomitans

synonym: Haemophilus actinomycetemcomitans


description: domain/bacteria

full scientific name: Lactobacillus rhamnosus (Hansen 1968) Collins et al. 1989

genus: Lactobacillus

species: Lactobacillus rhamnosus

synonym: Lacticaseibacillus rhamnosus

synonym: Lactobacillus casei subsp. rhamnosus


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas oryzihabitans Kodama et al. 1985

genus: Pseudomonas

species: Pseudomonas oryzihabitans

synonym: Flavimonas oryzihabitans

synonym: Chryseomonas oryzihabitans


description: domain/bacteria

full scientific name: Corynebacterium striatum (Chester 1901) Eberson 1918 (Approved Lists 1980)

species: Corynebacterium striatum

synonym: Bacterium striatum


description: domain/bacteria

full scientific name: Gardnerella vaginalis (Gardner and Dukes 1955) Greenwood and Pickett 1980

species: Gardnerella vaginalis

synonym: Corynebacterium vaginale

synonym: Haemophilus vaginalis


description: domain/bacteria

family: Caulobacteraceae

full scientific name: Brevundimonas diminuta (Leifson and Hugh 1954) Segers et al. 1994

genus: Brevundimonas

order: Caulobacterales

species: Brevundimonas diminuta

synonym: Pseudomonas diminuta


description: domain/bacteria

family: Cellulomonadaceae

full scientific name: Cellulomonas bibula Bergey et al. 1923

genus: Cellulomonas

order: Micrococcales

species: Cellulomonas bibula


description: domain/bacteria

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

species: Escherichia coli

synonym: Bacillus coli


class: Chitinophagia

description: domain/bacteria

family: Chitinophagaceae

full scientific name: Chitinophaga costaii Proença et al. 2014

genus: Chitinophaga

order: Chitinophagales

species: Chitinophaga costaii

class: Sphingobacteriia

description: Chitinophaga costaii strain A37T2 from Portugal 16S ribosomal RNA gene, partial sequence

description: ASM307138v1 assembly for Chitinophaga costaii A37T2

description: IMG-taxon 2671180112 annotated assembly for Chitinophaga costaii A37T2


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Haemophilus parahaemolyticus Pittman 1953 (Approved Lists 1980)

genus: Haemophilus

species: Haemophilus parahaemolyticus

synonym: Pseudohaemophilus parahaemolyticus


description: domain/bacteria

family: Campylobacteraceae

full scientific name: Campylobacter fetus (Smith and Taylor 1919) Sebald and Véron 1963 (Approved Lists 1980)

genus: Campylobacter

order: Campylobacterales

species: Campylobacter fetus

synonym: Vibrio fetus


description: domain/bacteria

full scientific name: Haemophilus parainfluenzae Rivers 1922 (Approved Lists 1980)

species: Haemophilus parainfluenzae

synonym: Parahaemophilus parainfluenzae


description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus faecalis (Andrewes and Horder 1906) Schleifer and Kilpper-Bälz 1984

genus: Enterococcus

order: Lactobacillales

species: Enterococcus faecalis

synonym: Streptococcus faecalis


description: domain/bacteria

full scientific name: Pasteurella multocida (Lehmann and Neumann 1899) Rosenbusch and Merchant 1939 (Approved Lists 1980)

genus: Pasteurella

species: Pasteurella multocida

synonym: Micrococcus gallicidus

synonym: Pasteurella gallicida

synonym: Bacterium multocidum


description: domain/bacteria

family: Moraxellaceae

full scientific name: Acinetobacter lwoffii (Audureau 1940) Brisou and Prévot 1954 (Approved Lists 1980)

genus: Acinetobacter

order: Pseudomonadales

species: Acinetobacter lwoffii

synonym: Moraxella lwoffi

synonym: Acinetobacter mesopotamicus


description: domain/bacteria

family: Yersiniaceae

full scientific name: Serratia marcescens Bizio 1823 (Approved Lists 1980)

genus: Serratia

species: Serratia marcescens

synonym: Serratia marcescens subsp. sakuensis


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium urealyticum Pitcher et al. 1992

genus: Corynebacterium

order: Mycobacteriales

species: Corynebacterium urealyticum


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Ralstonia pickettii (Ralston et al. 1973) Yabuuchi et al. 1996

genus: Ralstonia

order: Burkholderiales

species: Ralstonia pickettii

synonym: Pseudomonas pickettii

synonym: Burkholderia pickettii


description: domain/bacteria

family: Bacillaceae

full scientific name: Exiguobacterium acetylicum (Levine and Soppeland 1926) Farrow et al. 1994

genus: Exiguobacterium

species: Exiguobacterium acetylicum

synonym: Flavobacterium acetylicum

synonym: Brevibacterium acetylicum

family: Caryophanales, not assigned to family


description: domain/bacteria

full scientific name: Pseudomonas oryzihabitans Kodama et al. 1985

species: Pseudomonas oryzihabitans

synonym: Flavimonas oryzihabitans

synonym: Chryseomonas oryzihabitans


description: domain/bacteria

family: Comamonadaceae

full scientific name: Delftia acidovorans (den Dooren de Jong 1926) Wen et al. 1999

genus: Delftia

species: Delftia acidovorans

synonym: Comamonas acidovorans

synonym: Pseudomonas acidovorans


description: domain/bacteria

full scientific name: Moraxella osloensis Bøvre and Henriksen 1967 (Approved Lists 1980)

genus: Moraxella

species: Moraxella osloensis

synonym: Faucicola osloensis


description: domain/bacteria

full scientific name: Psychrobacter phenylpyruvicus (Bøvre and Henriksen 1967) Bowman et al. 1996

genus: Psychrobacter

species: Psychrobacter phenylpyruvicus

synonym: Moraxella phenylpyruvica


description: domain/bacteria

full scientific name: Aggregatibacter actinomycetemcomitans (Klinger 1912) Nørskov-Lauritsen and Kilian 2006

genus: Aggregatibacter

species: Aggregatibacter actinomycetemcomitans

synonym: Actinobacillus actinomycetemcomitans

synonym: Bacterium actinomycetemcomitans

synonym: Haemophilus actinomycetemcomitans


description: domain/bacteria

full scientific name: Actinobacillus ureae (Jones 1962) Mutters et al. 1986

genus: Actinobacillus

species: Actinobacillus ureae

synonym: Pasteurella ureae


description: domain/bacteria

full scientific name: Acinetobacter kyonggiensis Lee and Lee 2010

species: Acinetobacter kyonggiensis

description: Acinetobacter kyonggiensis strain KSL5401-037 16S ribosomal RNA gene, partial sequence

description: Acinetobacter kyonggiensis JCM 17071 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

species: Escherichia coli

synonym: Bacillus coli


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Paenibacillus telluris Lee et al. 2012

genus: Paenibacillus

species: Paenibacillus telluris

description: Paenibacillus telluris strain PS38 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Alcaligenaceae

full scientific name: Achromobacter dolens Vandamme et al. 2014

genus: Achromobacter

species: Achromobacter dolens

description: Achromobacter dolens partial 16S rRNA gene, type strain LMG 26840T

description: LMG 26840 assembly for Achromobacter dolens LMG 26840


description: domain/bacteria

full scientific name: Shigella boydii Ewing 1949 (Approved Lists 1980)

genus: Shigella

species: Shigella boydii


description: domain/bacteria

full scientific name: Acinetobacter nosocomialis Nemec et al. 2011

species: Acinetobacter nosocomialis


description: domain/bacteria


description: domain/bacteria

full scientific name: Acinetobacter pittii Nemec et al. 2011

species: Acinetobacter pittii


description: domain/bacteria

full scientific name: Acinetobacter ursingii Nemec et al. 2001

species: Acinetobacter ursingii

synonym: Acinetobacter septicus


description: domain/bacteria

description: ASM3050057v1 assembly for Acinetobacter pittii NIPH 76


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Limosilactobacillus fermentum (Beijerinck 1901) Zheng et al. 2020

genus: Limosilactobacillus

species: Limosilactobacillus fermentum

synonym: Lactobacillus fermentum

synonym: Lactobacillus cellobiosus

genus: Lactobacillus

species: Lactobacillus fermentum


description: domain/bacteria

family: Zoogloeaceae

full scientific name: Zoogloea ramigera Itzigsohn 1868 (Approved Lists 1980)

genus: Zoogloea

order: Rhodocyclales

species: Zoogloea ramigera

description: Zoogloea ramigera gene for 16S ribosomal RNA.

description: Z.ramigera gene for 16S rRNA (ATCC 19544)

description: ASM812506v1 assembly for Zoogloea ramigera ATCC 19544


description: domain/bacteria

full scientific name: Bacillus pumilus Meyer and Gottheil 1901 (Approved Lists 1980)

genus: Bacillus

order: Caryophanales

species: Bacillus pumilus


description: domain/bacteria

full scientific name: Bacillus licheniformis (Weigmann 1898) Chester 1901 (Approved Lists 1980)

species: Bacillus licheniformis

synonym: Clostridium licheniforme


description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: Gardnerella vaginalis (Gardner and Dukes 1955) Greenwood and Pickett 1980

genus: Gardnerella

species: Gardnerella vaginalis

synonym: Corynebacterium vaginale

synonym: Haemophilus vaginalis


description: domain/bacteria

full scientific name: Corynebacterium jeikeium Jackman et al. 1988

species: Corynebacterium jeikeium


description: domain/bacteria

full scientific name: Pasteurella dagmatis Mutters et al. 1985

genus: Pasteurella

order: Pasteurellales

species: Pasteurella dagmatis


description: domain/bacteria

family: Actinomycetaceae

full scientific name: Arcanobacterium haemolyticum (ex MacLean et al. 1946) Collins et al. 1983

genus: Arcanobacterium

order: Actinomycetales

species: Arcanobacterium haemolyticum


description: domain/bacteria

full scientific name: Moraxella nonliquefaciens (Scarlett 1916) Lwoff 1939 (Approved Lists 1980)

species: Moraxella nonliquefaciens


description: domain/bacteria

full scientific name: Bacillus cereus Frankland and Frankland 1887 (Approved Lists 1980)

species: Bacillus cereus


description: domain/bacteria

full scientific name: Rouxiella chamberiensis Le Flèche-Matéos et al. 2015

genus: Rouxiella

species: Rouxiella chamberiensis


description: domain/bacteria

full scientific name: Acinetobacter parvus Nemec et al. 2003

genus: Acinetobacter

species: Acinetobacter parvus


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Haemophilus influenzae corrig. (Lehmann and Neumann 1896) Winslow et al. 1917 (Approved Lists 1980)

genus: Haemophilus

species: Haemophilus influenzae

synonym: Hemophilus influenzae

synonym: Bacterium influenzae


description: domain/bacteria

family: Weeksellaceae

full scientific name: Elizabethkingia meningoseptica (King 1959) Kim et al. 2005

genus: Elizabethkingia

order: Flavobacteriales

species: Elizabethkingia meningoseptica

synonym: Flavobacterium meningosepticum

synonym: Chryseobacterium meningosepticum

family: Flavobacteriaceae


description: domain/bacteria

full scientific name: Lactobacillus jensenii Gasser et al. 1970 (Approved Lists 1980)

species: Lactobacillus jensenii


description: domain/bacteria

full scientific name: Aggregatibacter aphrophilus (Khairat 1940) Nørskov-Lauritsen and Kilian 2006

species: Aggregatibacter aphrophilus

synonym: Haemophilus paraphrophilus

synonym: Haemophilus aphrophilus


description: domain/bacteria

full scientific name: Shigella flexneri Castellani and Chalmers 1919 (Approved Lists 1980)

species: Shigella flexneri


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)

genus: Pseudomonas

species: Pseudomonas aeruginosa

synonym: Pseudomonas paraeruginosa

synonym: Bacterium aeruginosum


description: domain/bacteria

full scientific name: Bacillus benzoevorans Pichinoty et al. 1987

species: Bacillus benzoevorans


description: domain/bacteria

full scientific name: Limosilactobacillus fermentum (Beijerinck 1901) Zheng et al. 2020

species: Limosilactobacillus fermentum

species: Lactobacillus fermentum


description: domain/bacteria

full scientific name: Corynebacterium striatum (Chester 1901) Eberson 1918 (Approved Lists 1980)

genus: Corynebacterium

species: Corynebacterium striatum

synonym: Bacterium striatum


description: domain/bacteria

full scientific name: Bacillus circulans Jordan 1890 (Approved Lists 1980)

species: Bacillus circulans

synonym: Niallia circulans


description: domain/bacteria

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

species: Escherichia coli

synonym: Bacillus coli


description: domain/bacteria

full scientific name: Chryseobacterium indologenes (Yabuuchi et al. 1983) Vandamme et al. 1994

genus: Chryseobacterium

species: Chryseobacterium indologenes

synonym: Flavobacterium indologenes


description: domain/bacteria

full scientific name: Pseudomonas putida (Trevisan 1889) Migula 1895 (Approved Lists 1980)

species: Pseudomonas putida

synonym: Arthrobacter siderocapsulatus

synonym: Bacillus putidus

description: ASM593054v1 assembly for Pseudomonas putida NRRL B-252

description: PDT001638956.1 assembly for Pseudomonas putida JCM 20187


description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus casseliflavus (ex Vaughan et al. 1979) Collins et al. 1984

genus: Enterococcus

species: Enterococcus casseliflavus

synonym: Streptococcus casseliflavus

synonym: Enterococcus flavescens

synonym: Streptococcus faecium subsp. casseliflavus


description: domain/bacteria

family: Moraxellaceae

full scientific name: Acinetobacter baumannii Bouvet and Grimont 1986

species: Acinetobacter baumannii

description: Acin_baum_NIPH_601_V1 assembly for Acinetobacter baumannii NIPH 601


description: domain/bacteria

full scientific name: Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987

genus: Salmonella

species: Salmonella enterica

synonym: Bacillus typhimurium

synonym: Bacillus enteritidis

synonym: Salmonella enteritidis

synonym: Salmonella paratyphi

synonym: Salmonella typhi

synonym: Salmonella typhimurium

synonym: Bacillus typhi

synonym: Bacillus choleraesuis

synonym: Salmonella choleraesuis


description: domain/bacteria

full scientific name: Klebsiella oxytoca (Flügge 1886) Lautrop 1956 (Approved Lists 1980)

genus: Klebsiella

species: Klebsiella oxytoca

synonym: Bacillus oxytocus


description: domain/bacteria

full scientific name: Moraxella osloensis Bøvre and Henriksen 1967 (Approved Lists 1980)

genus: Moraxella

species: Moraxella osloensis

synonym: Faucicola osloensis


description: domain/bacteria

full scientific name: Pasteurella bettyae corrig. Sneath and Stevens 1990

species: Pasteurella bettyae

synonym: Pasteurella bettii


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus hominis Kloos and Schleifer 1975 (Approved Lists 1980)

genus: Staphylococcus

species: Staphylococcus hominis


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Burkholderia cepacia (Palleroni and Holmes 1981 ex Burkholder 1950) Yabuuchi et al. 1993

genus: Burkholderia

species: Burkholderia cepacia

synonym: Pseudomonas cepacia


description: domain/bacteria

family: Rhizobiaceae

full scientific name: Agrobacterium radiobacter (Beijerinck and van Delden 1902) Conn 1942 (Approved Lists 1980)

genus: Agrobacterium

order: Hyphomicrobiales

species: Agrobacterium radiobacter

synonym: Beijerinckia fluminensis

synonym: Bacillus radiobacter

synonym: Rhizobium radiobacter


description: domain/bacteria

full scientific name: Arcanobacterium haemolyticum (ex MacLean et al. 1946) Collins et al. 1983

species: Arcanobacterium haemolyticum


description: domain/bacteria

family: Neisseriaceae

full scientific name: Neisseria subflava (Flügge 1886) Trevisan 1889 (Approved Lists 1980)

genus: Neisseria

order: Neisseriales

species: Neisseria subflava

synonym: Micrococcus subflavus


description: domain/bacteria

family: Cardiobacteriaceae

full scientific name: Cardiobacterium hominis Slotnick and Dougherty 1964 (Approved Lists 1980)

genus: Cardiobacterium

order: Cardiobacteriales

species: Cardiobacterium hominis


description: domain/bacteria

full scientific name: Enterococcus faecalis (Andrewes and Horder 1906) Schleifer and Kilpper-Bälz 1984

species: Enterococcus faecalis

synonym: Streptococcus faecalis


description: domain/bacteria

family: Paracoccaceae

full scientific name: Amaricoccus veronensis Maszenan et al. 1997

genus: Amaricoccus

order: Rhodobacterales

species: Amaricoccus veronensis

family: Rhodobacteraceae


description: domain/bacteria

full scientific name: Amaricoccus tamworthensis Maszenan et al. 1997

species: Amaricoccus tamworthensis


description: domain/bacteria

full scientific name: Aggregatibacter actinomycetemcomitans (Klinger 1912) Nørskov-Lauritsen and Kilian 2006

genus: Aggregatibacter

species: Aggregatibacter actinomycetemcomitans

synonym: Actinobacillus actinomycetemcomitans

synonym: Bacterium actinomycetemcomitans

synonym: Haemophilus actinomycetemcomitans


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Levilactobacillus brevis (Orla-Jensen 1919) Zheng et al. 2020

genus: Levilactobacillus

species: Levilactobacillus brevis

synonym: Betabacterium breve

synonym: Lactobacillus brevis

genus: Lactobacillus

species: Lactobacillus brevis


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium urealyticum Pitcher et al. 1992

species: Corynebacterium urealyticum


description: domain/bacteria

full scientific name: Corynebacterium amycolatum Collins et al. 1988

species: Corynebacterium amycolatum


description: domain/bacteria

family: Aeromonadaceae

full scientific name: Aeromonas hydrophila (Chester 1901) Stanier 1943 (Approved Lists 1980)

genus: Aeromonas

order: Aeromonadales

species: Aeromonas hydrophila

synonym: Pseudomonas hydrophila

synonym: Bacillus hydrophilus


description: domain/bacteria

full scientific name: Moraxella nonliquefaciens (Scarlett 1916) Lwoff 1939 (Approved Lists 1980)

species: Moraxella nonliquefaciens


description: domain/bacteria

full scientific name: Branhamella caviae Marrs and Weir 1990

genus: Branhamella

species: Branhamella caviae

strain designation: GP 16


description: domain/bacteria

full scientific name: Leuconostoc lactis Garvie 1960 (Approved Lists 1980)

genus: Leuconostoc

species: Leuconostoc lactis

synonym: Leuconostoc argentinum

family: Leuconostocaceae


description: domain/bacteria

full scientific name: Amaricoccus macauensis Maszenan et al. 1997

species: Amaricoccus macauensis


description: domain/bacteria

full scientific name: Amaricoccus kaplicensis Maszenan et al. 1997

species: Amaricoccus kaplicensis


description: domain/bacteria

family: Bacillaceae

full scientific name: Bacillus cereus Frankland and Frankland 1887 (Approved Lists 1980)

genus: Bacillus

species: Bacillus cereus


description: domain/bacteria

family: Lysobacteraceae

full scientific name: Stenotrophomonas maltophilia (Hugh 1981 ex Hugh and Ryschenkow 1961) Palleroni and Bradbury 1993

genus: Stenotrophomonas

order: Lysobacterales

species: Stenotrophomonas maltophilia

synonym: Stenotrophomonas africana

synonym: Xanthomonas maltophilia

synonym: Pseudomonas maltophilia


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987

genus: Salmonella

order: Enterobacterales

species: Salmonella enterica

synonym: Bacillus typhimurium

synonym: Bacillus enteritidis

synonym: Salmonella enteritidis

synonym: Salmonella paratyphi

synonym: Salmonella typhi

synonym: Salmonella typhimurium

synonym: Bacillus typhi

synonym: Bacillus choleraesuis

synonym: Salmonella choleraesuis


description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: Gardnerella vaginalis (Gardner and Dukes 1955) Greenwood and Pickett 1980

genus: Gardnerella

order: Bifidobacteriales

species: Gardnerella vaginalis

synonym: Corynebacterium vaginale

synonym: Haemophilus vaginalis


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)

genus: Pseudomonas

species: Pseudomonas aeruginosa

synonym: Pseudomonas paraeruginosa

synonym: Bacterium aeruginosum


description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus villorum Vancanneyt et al. 2001

genus: Enterococcus

order: Lactobacillales

species: Enterococcus villorum

synonym: Enterococcus porcinus

description: Enterococcus villorum 16S rRNA gene, strain LMG 12287

description: Enterococcus villorum gene for 16S ribosomal RNA, partial sequence, strain: JCM 11557

description: Enterococcus villorum gene for 16S rRNA, partial sequence, strain: NBRC 100699.

description: Enterococcus villorum strain LMG 12287 16S ribosomal RNA gene, partial sequence.

description: Enterococcus villorum strain LMG 12287 16S ribosomal RNA gene, partial sequence 16S-23S ribosomal RNA intergenic spacer, complete sequence and 23S ribosomal RNA gene, partial sequence.

description: ASM799022v1 assembly for Enterococcus villorum NBRC 100699

description: ASM4243346v1 assembly for Enterococcus villorum CCM 4887


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Aggregatibacter aphrophilus (Khairat 1940) Nørskov-Lauritsen and Kilian 2006

species: Aggregatibacter aphrophilus

synonym: Haemophilus paraphrophilus

synonym: Haemophilus aphrophilus


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium bohemicum Reischl et al. 1998

genus: Mycobacterium

species: Mycobacterium bohemicum


description: domain/bacteria

full scientific name: Corynebacterium jeikeium Jackman et al. 1988

genus: Corynebacterium

species: Corynebacterium jeikeium


description: domain/bacteria

full scientific name: Corynebacterium striatum (Chester 1901) Eberson 1918 (Approved Lists 1980)

species: Corynebacterium striatum

synonym: Bacterium striatum


description: domain/bacteria

family: Nocardiaceae

full scientific name: Rhodococcus equi (Magnusson 1923) Goodfellow and Alderson 1977 (Approved Lists 1980)

genus: Rhodococcus

species: Rhodococcus equi

synonym: Prescottella equi

synonym: Corynebacterium equi

synonym: Nocardia restricta

synonym: Prescottia equi

synonym: Proactinomyces restrictus


description: domain/bacteria

full scientific name: Pasteurella bettyae corrig. Sneath and Stevens 1990

genus: Pasteurella

species: Pasteurella bettyae

synonym: Pasteurella bettii


description: domain/bacteria

full scientific name: Haemophilus parahaemolyticus Pittman 1953 (Approved Lists 1980)

genus: Haemophilus

species: Haemophilus parahaemolyticus

synonym: Pseudohaemophilus parahaemolyticus


description: domain/bacteria

full scientific name: Aggregatibacter actinomycetemcomitans (Klinger 1912) Nørskov-Lauritsen and Kilian 2006

genus: Aggregatibacter

species: Aggregatibacter actinomycetemcomitans

synonym: Actinobacillus actinomycetemcomitans

synonym: Bacterium actinomycetemcomitans

synonym: Haemophilus actinomycetemcomitans


description: domain/bacteria

family: Dietziaceae

full scientific name: Dietzia maris (Nesterenko et al. 1982 ex Harrison 1929) Rainey et al. 1995

genus: Dietzia

species: Dietzia maris

synonym: Rhodococcus maris

synonym: Dietzia cinnamea


description: domain/bacteria

full scientific name: Haemophilus influenzae corrig. (Lehmann and Neumann 1896) Winslow et al. 1917 (Approved Lists 1980)

species: Haemophilus influenzae

synonym: Hemophilus influenzae

synonym: Bacterium influenzae


description: domain/bacteria

family: Comamonadaceae

full scientific name: Giesbergeria giesbergeri (Williams and Rittenberg 1957) Grabovich et al. 2006

genus: Giesbergeria

species: Giesbergeria giesbergeri

synonym: Aquaspirillum giesbergeri

synonym: Spirillum giesbergeri


description: domain/bacteria

full scientific name: Enterococcus faecium (Orla-Jensen 1919) Schleifer and Kilpper-Bälz 1984

species: Enterococcus faecium

synonym: Streptococcus faecium


class: Clostridia

description: domain/bacteria

family: Anaerovoracaceae

full scientific name: Mogibacterium diversum Nakazawa et al. 2002

genus: Mogibacterium

order: Peptostreptococcales

species: Mogibacterium diversum

family: Eubacteriales, not assigned to family

order: Eubacteriales

description: Mogibacterium diversum gene for 16S rRNA

description: Mogibacterium diversum gene for 16S ribosomal RNA, partial sequence, strain: JCM 11205

description: Mogibacterium diversum strain HM-7 16S ribosomal RNA, partial sequence

description: ASM299892v1 assembly for Mogibacterium diversum CCUG 47132


description: domain/bacteria

full scientific name: Corynebacterium diphtheriae (Kruse 1886) Lehmann and Neumann 1896 (Approved Lists 1980)

order: Mycobacteriales

species: Corynebacterium diphtheriae

synonym: Bacillus diphtheriae


culture collection no.: CIP A88

description: domain/bacteria

family: Actinomycetaceae

full scientific name: Trueperella pyogenes (Glage 1903) Yassin et al. 2011

genus: Trueperella

species: Trueperella pyogenes

synonym: Actinomyces pyogenes

synonym: Corynebacterium pyogenes

synonym: Arcanobacterium pyogenes

synonym: Bacillus pyogenes


class: Not assigned to order

family: Not assigned to family

genus: Virgibacillus

order: Not assigned to order

species: Virgibacillus qinghaiensis


description: domain/bacteria

family: Thermoanaerobacteraceae

full scientific name: Gelria glutamica Plugge et al. 2002

genus: Gelria

order: Thermoanaerobacterales

species: Gelria glutamica

strain designation: TGO

description: Gelria glutamica strain TGO 16S ribosomal RNA gene, complete sequence


description: domain/bacteria

family: Nocardiopsidaceae

genus: Nocardiopsis

order: Streptosporangiales

species: Nocardiopsis xinjiangensis

synonym: Brachystreptospora xinjiangensis

family: Nocardiopsaceae

full scientific name: Nocardiopsis xinjiangensis Li et al. 2003 emend. Nouioui et al. 2018

description: Nocardiopsis xinjiangensis 16S ribosomal RNA gene, partial sequence

description: SOAPdenovo v1.06 assembly for Nocardiopsis xinjiangensis YIM 90004


description: domain/bacteria

family: Bartonellaceae

full scientific name: Bartonella rattimassiliensis Gundi et al. 2004

genus: Bartonella

species: Bartonella rattimassiliensis


class: Epsilonproteobacteria

description: domain/bacteria

family: Helicobacteraceae

full scientific name: Helicobacter typhlonius Franklin et al. 2002

genus: Helicobacter

order: Campylobacterales

species: Helicobacter typhlonius

description: Helicobacter typhlonius strain MIT 97-6810 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Neisseriaceae

full scientific name: Neisseria lactamica corrig. Hollis et al. 1969 (Approved Lists 1980)

genus: Neisseria

species: Neisseria lactamica

synonym: Neisseria lactamicus


description: domain/bacteria

full scientific name: Streptomonospora alba Li et al. 2003

genus: Streptomonospora

species: Streptomonospora alba

full scientific name: Streptomonospora alba Li et al. 2003 emend. Nouioui et al. 2018

order: Actinomycetales

description: Streptomonospora albus 16S ribosomal RNA gene, partial sequence

description: ASM82668v1 assembly for Streptomonospora alba YIM 90003


class: Alphaproteobacteria

description: domain/bacteria

family: Paracoccaceae

full scientific name: Paracoccus kondratievae Doronina and Trotsenko 2001

genus: Paracoccus

species: Paracoccus kondratievae

family: Rhodobacteraceae

strain designation: GB

description: ASM2792224v1 assembly for Paracoccus kondratievae VKM B-2222

description: ASM4268392v1 assembly for Paracoccus kondratievae VKM B-2222


description: domain/bacteria

family: Halomonadaceae

full scientific name: Cobetia marina (Cobet et al. 1970) Arahal et al. 2002

genus: Cobetia

order: Oceanospirillales

species: Cobetia marina

synonym: Halomonas halodurans

synonym: Cobetia pacifica

synonym: Deleya marina

synonym: Arthrobacter marinus

synonym: Pseudomonas marina

synonym: Halomonas marina


description: domain/bacteria

family: Yersiniaceae

full scientific name: Serratia bockelmannii Cho et al. 2020

genus: Serratia

species: Serratia bockelmannii


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

species: Escherichia coli

synonym: Bacillus coli


class: Halobacteria

description: domain/archaea

domain: Archaea

family: Haloarculaceae

full scientific name: Halosimplex carlsbadense Vreeland et al. 2003

genus: Halosimplex

keyword: phylum/methanobacteriota

order: Halobacteriales

phylum: Methanobacteriota

species: Halosimplex carlsbadense

phylum: Euryarchaeota

description: Halosimplex carlsbadense 16S small subunit ribosomal RNA A gene, partial sequence

description: Halosimplex carlsbadense 16S small subunit ribosomal RNA B gene, partial sequence

description: Halosimplex carlsbadense 16S small subunit ribosomal RNA C gene, partial sequence

description: Halosimplex carlsbadense gene for 16S rRNA, complete sequence, strain: JCM 11222.

description: ASM33745v1 assembly for Halosimplex carlsbadense 2-9-1


description: domain/bacteria

family: Moraxellaceae

full scientific name: Acinetobacter pittii Nemec et al. 2011

genus: Acinetobacter

order: Pseudomonadales

species: Acinetobacter pittii


description: domain/bacteria

family: Psychromonadaceae

full scientific name: Psychromonas profunda Xu et al. 2003

genus: Psychromonas

order: Alteromonadales

species: Psychromonas profunda

description: Psychromonas profunda 16S rRNA gene


description: domain/bacteria

family: Alteromonadaceae

full scientific name: Alteromonas marina Yoon et al. 2003

genus: Alteromonas

species: Alteromonas marina

description: Alteromonas marina strain SW-47 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Clostridiaceae

full scientific name: Clostridium tetani (Flügge 1886) Bergey et al. 1923 (Approved Lists 1980)

genus: Clostridium

species: Clostridium tetani

synonym: Bacillus tetani


description: domain/bacteria

family: Nocardiaceae

full scientific name: Nocardia inohanensis Kageyama et al. 2004

genus: Nocardia

species: Nocardia inohanensis

strain designation: IMIB RIN-622


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Paenibacillus terrae Yoon et al. 2003

genus: Paenibacillus

order: Caryophanales

species: Paenibacillus terrae

description: Paenibacillus terrae strain AM141 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Parvularculaceae

full scientific name: Parvularcula bermudensis Cho and Giovannoni 2003

genus: Parvularcula

order: Parvularculales

species: Parvularcula bermudensis


description: domain/bacteria

family: Acetobacteraceae

full scientific name: Roseomonas gilardii subsp. rosea Han et al. 2003

genus: Roseomonas

order: Rhodospirillales

species: Roseomonas gilardii subsp. rosea

description: Roseomonas gilardii subsp. rosea 16S ribosomal RNA gene, partial sequence.

description: Roseomonas gilardii subsp. rosea strain ATCC BAA-691 16S ribosomal RNA gene, partial sequence.

description: 50618_A01 assembly for Roseomonas gilardii subsp. rosea NCTC13290

description: ASM51862v1 assembly for Roseomonas gilardii subsp. rosea ATCC BAA-691


description: domain/bacteria

full scientific name: Roseomonas mucosa Han et al. 2003

species: Roseomonas mucosa

description: Roseomonas mucosa strain MDA5527 16S ribosomal RNA gene, partial sequence.

description: 50624_C01 assembly for Roseomonas mucosa NCTC13291

description: ASM62222v1 assembly for Roseomonas mucosa ATCC BAA-692


description: domain/bacteria

family: Devosiaceae

full scientific name: Devosia neptuniae Rivas et al. 2003

genus: Devosia

order: Hyphomicrobiales

species: Devosia neptuniae

family: Hyphomicrobiaceae