culture collection no.: ACAM 179

description: domain/bacteria

family: Colwelliaceae

full scientific name: Colwellia psychrotropica Bowman et al. 1998

genus: Colwellia

species: Colwellia psychrotropica

description: Colwellia psychrotropica ACAM 179T 16S ribosomal RNA gene, partial sequence


Matching level: species

class: Mollicutes

description: domain/bacteria

domain: Bacteria

family: Mycoplasmataceae

full scientific name: Mycoplasma leopharyngis Hill 1992

genus: Mycoplasma

keyword: phylum/mycoplasmatota

order: Mycoplasmatales

phylum: Mycoplasmatota

species: Mycoplasma leopharyngis

synonym: Mycoplasmopsis leopharyngis

type strain: yes

database: nuccore

description: Mycoplasma leopharyngis 16S rRNA gene, complete sequence

description: Mycoplasma leopharyngis 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence.


class: Flavobacteriia

description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Lutibacter crassostreae Park et al. 2015

genus: Lutibacter

keyword: phylum/bacteroidota

order: Flavobacteriales

phylum: Bacteroidota

species: Lutibacter crassostreae

description: Lutibacter crassostreae strain TYO-8 16S ribosomal RNA gene, partial sequence


culture collection no.: UNIQEM 25, VKM B-2128

class: Alphaproteobacteria

description: domain/bacteria

family: Methylocystaceae

full scientific name: Methylocystis echinoides (ex Gal'chenko et al. 1977) Bowman et al. 1993

genus: Methylocystis

keyword: phylum/pseudomonadota

order: Hyphomicrobiales

phylum: Pseudomonadota

species: Methylocystis echinoides

synonym: Methylocystis echinoides

description: Methylocystis echinoides partial 16S rRNA gene, strain IMET 10491


Matching level: strain

description: domain/bacteria

full scientific name: Mesoplasma syrphidae Tully et al. 1994

genus: Mesoplasma

species: Mesoplasma syrphidae

synonym: Tullyiplasma syrphidae

synonym: Entomoplasma syrphidae

family: Entomoplasmataceae

order: Entomoplasmatales

strain designation: YJS

description: Mesoplasma syrphidae 16S ribosomal RNA gene, partial sequence

assembly level: scaffold

description: ASM68654v1 assembly for Mesoplasma syrphidae ATCC 51578

assembly level: complete

description: ASM284356v1 assembly for Mesoplasma syrphidae YJS


class: Gammaproteobacteria

description: domain/bacteria

family: Moraxellaceae

full scientific name: Acinetobacter populi Li et al. 2015

genus: Acinetobacter

order: Pseudomonadales

species: Acinetobacter populi

description: Acinetobacter populi strain PBJ7 16S ribosomal RNA gene, partial sequence

assembly level: contig

description: ASM217412v1 assembly for Acinetobacter populi PBJ7


class: Chlorobiia

description: domain/bacteria

family: Chlorobiaceae

full scientific name: Pelodictyon phaeoclathratiforme Overmann and Pfennig 1990

genus: Pelodictyon

keyword: phylum/chlorobiota

order: Chlorobiales

phylum: Chlorobiota

species: Pelodictyon phaeoclathratiforme

strain designation: BU 1


class: Cytophagia

description: domain/bacteria

family: Flammeovirgaceae

full scientific name: Tunicatimonas pelagia Yoon et al. 2016

genus: Tunicatimonas

order: Cytophagales

species: Tunicatimonas pelagia

description: Tunicatimonas pelagia gene for 16S rRNA, partial sequence

description: ASM3050632v1 assembly for Tunicatimonas pelagia NBRC 107804


description: domain/bacteria

family: Bartonellaceae

full scientific name: Mesorhizobium prunaredense Mohamad et al. 2018

genus: Mesorhizobium

species: Mesorhizobium prunaredense

family: Phyllobacteriaceae

description: Mesorhizobium prunaredense strain STM4891 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Azospirillaceae

full scientific name: Niveispirillum fermenti Lin et al. 2014

genus: Niveispirillum

order: Rhodospirillales

species: Niveispirillum fermenti

description: Niveispirillum fermenti collected-by Wen-Shao Yen 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Devosiaceae

full scientific name: Devosia nitrariae corrig. Xu et al. 2018

genus: Devosia

species: Devosia nitrariae

synonym: Devosia nitraria

full scientific name: Devosia nitrariae Xu et al. 2018

description: Devosia nitrariae 16S ribosomal RNA gene, partial sequence

description: ASM3016011v1 assembly for Devosia nitrariae NBRC 112416

description: ASM4243186v1 assembly for Devosia nitrariae NBRC 112416


class: Chitinophagia

description: domain/bacteria

family: Chitinophagaceae

full scientific name: Ferruginibacter yonginensis Lee et al. 2014

genus: Ferruginibacter

order: Chitinophagales

species: Ferruginibacter yonginensis

description: Ferruginibacter yonginensis strain CECT 8289 16S ribosomal RNA gene, partial sequence

description: ASM4265146v1 assembly for Ferruginibacter yonginensis CECT 8289


description: domain/bacteria

family: Ectothiorhodospiraceae

full scientific name: Ectothiorhodospira haloalkaliphila Imhoff and Süling 1997

genus: Ectothiorhodospira

order: Chromatiales

species: Ectothiorhodospira haloalkaliphila

description: Ectothiorhodospira haloalkaliphila 16S rRNA gene, strain BN 9903

description: Ectothiorhodospira haloalkaliphila partial 16S rRNA gene, strain 9903 = ATCC 51935

description: ASM63393v1 assembly for Ectothiorhodospira haloalkaliphila ATCC 51935


description: domain/bacteria

family: Rhizobiaceae

full scientific name: Pararhizobium polonicum Pulawska et al. 2017

genus: Pararhizobium

species: Pararhizobium polonicum

description: Pararhizobium polonicum partial 16S rRNA gene, strain F5.1

description: ASM168736v1 assembly for Pararhizobium polonicum F5.1


description: domain/bacteria

family: Roseobacteraceae

full scientific name: Salipiger profundus (Li et al. 2015) Wirth and Whitman 2018

genus: Salipiger

order: Rhodobacterales

species: Salipiger profundus

synonym: Salipiger nanhaiensis

synonym: Thiobacimonas profunda

family: Rhodobacteraceae

description: Salipiger profundus strain JLT2016 16S ribosomal RNA gene, partial sequence

description: ASM196938v1 assembly for Salipiger profundus JLT2016

description: ASM1463726v1 assembly for Salipiger profundus CGMCC 1.12377


culture collection no.: KCTC 2386

class: Bacilli

description: domain/bacteria

family: Lactobacillaceae

full scientific name: Leuconostoc kimchii Kim et al. 2000

genus: Leuconostoc

keyword: phylum/bacillota

order: Lactobacillales

phylum: Bacillota

species: Leuconostoc kimchii

family: Leuconostocaceae

description: Leuconostoc kimchii 16S ribosomal RNA gene, partial sequence

description: ASM9250v1 assembly for Leuconostoc kimchii IMSNU 11154


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Seonamhaeicola aphaedonensis Park et al. 2014

genus: Seonamhaeicola

species: Seonamhaeicola aphaedonensis

description: Seonamhaeicola aphaedonensis strain AH-M5 from South Korea 16S ribosomal RNA gene, partial sequence

description: ASM338619v1 assembly for Seonamhaeicola aphaedonensis CECT 8487


class: Rhodothermia

description: domain/bacteria

family: Salinibacteraceae

full scientific name: Salinibacter altiplanensis Viver et al. 2018

genus: Salinibacter

keyword: phylum/rhodothermota

order: Rhodothermales

phylum: Rhodothermota

species: Salinibacter altiplanensis

description: Salinibacter sp. AN15 partial 16S rRNA gene, strain AN15

description: ASM289464v1 assembly for Salinibacter altiplanensis AN15


class: Spirochaetia

description: domain/bacteria

family: Brachyspiraceae

full scientific name: Brachyspira aalborgi Hovind-Hougen et al. 1983

genus: Brachyspira

keyword: phylum/spirochaetota

order: Brachyspirales

phylum: Spirochaetota

species: Brachyspira aalborgi

description: B.aalborgi 16S ribosomal RNA

description: ASM801645v1 assembly for Brachyspira aalborgi 513A


description: domain/bacteria

family: Sphingomonadaceae

full scientific name: Sphingobium algorifonticola Chen et al. 2020

genus: Sphingobium

order: Sphingomonadales

species: Sphingobium algorifonticola

description: Sphingobium sp. TLA-22 partial 16S rRNA gene, strain TLA-22, isolate stream

description: ASM400548v1 assembly for Sphingobium algorifonticola TLA-22


description: domain/bacteria

family: Idiomarinaceae

full scientific name: Idiomarina xiamenensis Wang et al. 2011

genus: Idiomarina

order: Alteromonadales

species: Idiomarina xiamenensis

description: Idiomarina xiamenensis culture-collection MCCC:1A01370 16S ribosomal RNA gene, partial sequence

description: ASM29989v1 assembly for Idiomarina xiamenensis 10-D-4


class: Actinomycetes

description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces caldifontis Amin et al. 2017

genus: Streptomyces

keyword: phylum/actinomycetota

order: Kitasatosporales

phylum: Actinomycetota

species: Streptomyces caldifontis

order: Streptomycetales

description: Streptomyces caldifontis gene for 16S ribosomal RNA, partial sequence

description: ASM1646467v1 assembly for Streptomyces caldifontis CPCC 204147


description: domain/bacteria

family: Bacillaceae

full scientific name: Ornithinibacillus halotolerans Lu et al. 2014

genus: Ornithinibacillus

order: Caryophanales

species: Ornithinibacillus halotolerans

description: Ornithinibacillus halotolerans strain CGMCC 1.12408 16S ribosomal RNA gene, partial sequence

description: ASM1463740v1 assembly for Ornithinibacillus halotolerans CGMCC 1.12408


description: domain/bacteria

family: Cyclobacteriaceae

full scientific name: Belliella marina Song et al. 2015

genus: Belliella

species: Belliella marina

description: Belliella marina strain SW112 16S ribosomal RNA gene, partial sequence

description: ASM4268244v1 assembly for Belliella marina CGMCC 1.15180


description: domain/bacteria

full scientific name: Taibaiella yonginensis Singh et al. 2015

genus: Taibaiella

species: Taibaiella yonginensis

description: Taibaiella yonginensis strain THG-SC4 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Bartonellaceae

full scientific name: Phyllobacterium ifriqiyense Mantelin et al. 2006

genus: Phyllobacterium

order: Hyphomicrobiales

species: Phyllobacterium ifriqiyense

family: Phyllobacteriaceae

description: Phyllobacterium ifriqiyense strain STM 370 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Pontibacillus yanchengensis Yang et al. 2011

genus: Pontibacillus

species: Pontibacillus yanchengensis

description: Pontibacillus yanchengensis strain Y32 16S ribosomal RNA gene, partial sequence

description: ASM77063v1 assembly for Pontibacillus yanchengensis Y32


description: domain/bacteria

family: Rhodoligotrophaceae

full scientific name: Rhodoligotrophos jinshengii Deng et al. 2014

genus: Rhodoligotrophos

species: Rhodoligotrophos jinshengii

family: Parvibaculaceae

description: Rhodoligotrophos jinshengii strain BUT-3 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Hyphomonadaceae

full scientific name: Hyphomonas beringensis Li et al. 2015

genus: Hyphomonas

order: Caulobacterales

species: Hyphomonas beringensis

description: Hyphomonas beringensis strain MCCC 1A07321 16S ribosomal RNA gene, partial sequence

description: SOAPdenovo v1.05 assembly for Hyphomonas beringensis 25B14_1


description: domain/bacteria

family: Mycoplasmataceae

full scientific name: Mycoplasma indiense Hill 1993

genus: Mycoplasma

order: Mycoplasmatales

species: Mycoplasma indiense

synonym: Metamycoplasma indiense

description: Mycoplasma indiense strain 3T(T) 16S ribosomal RNA gene, partial sequence

description: Mycoplasma indiense 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence.


class: Betaproteobacteria

description: domain/bacteria

family: Burkholderiaceae

full scientific name: Burkholderia mallei (Zopf 1885) Yabuuchi et al. 1993

genus: Burkholderia

order: Burkholderiales

species: Burkholderia mallei

synonym: Bacillus mallei

synonym: Malleomyces mallei

synonym: Pseudomonas mallei

description: Burkholderia mallei strain ATCC 23344 16S ribosomal RNA gene, complete sequence

description: Burkholderia mallei gene for 16S rRNA, partial sequence, strain: ATCC 23344 (= EY 2233, = RH 627, = NCTC 7383).

description: ASM1170v1 assembly for Burkholderia mallei ATCC 23344

description: 58116_D01 assembly for Burkholderia mallei NCTC12938

description: ASM3395606v1 assembly for Burkholderia mallei ATCC 23344


Matching level: subspecies

description: domain/bacteria

family: Microbacteriaceae

full scientific name: Leifsonia xyli (Davis et al. 1984) Evtushenko et al. 2000

genus: Leifsonia

order: Micrococcales

species: Leifsonia xyli

synonym: Clavibacter xyli

strain designation: PDDCC 7127, L1A


description: domain/bacteria

full scientific name: Algitalea ulvae Yoon et al. 2015

genus: Algitalea

order: Flavobacteriales

species: Algitalea ulvae

description: Algitalea ulvae gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

full scientific name: Lacinutrix jangbogonensis Lee et al. 2015

genus: Lacinutrix

species: Lacinutrix jangbogonensis

description: Lacinutrix jangbogonensis strain PAMC 27137 16S ribosomal RNA gene, partial sequence

description: ASM79744v1 assembly for Lacinutrix jangbogonensis PAMC 27137


description: domain/bacteria

full scientific name: Flavobacterium gyeonganense Kim et al. 2014

genus: Flavobacterium

species: Flavobacterium gyeonganense

description: Flavobacterium gyeonganense strain CECT 8365 16S ribosomal RNA gene, partial sequence

description: ASM2962529v1 assembly for Flavobacterium gyeonganense KACC 17688

description: ASM4242746v1 assembly for Flavobacterium gyeonganense CECT 8365


description: domain/bacteria

full scientific name: Flavobacterium ureilyticum Dahal and Kim 2019

species: Flavobacterium ureilyticum

description: Flavobacterium ureilyticum strain S-42 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Flavobacterium oryzae Chen et al. 2014

species: Flavobacterium oryzae

description: Flavobacterium oryzae partial 16S rRNA gene, type strain Jyi-05T


description: domain/bacteria

family: Paracoccaceae

full scientific name: Roseicitreum antarcticum Yu et al. 2011

genus: Roseicitreum

species: Roseicitreum antarcticum

family: Rhodobacteraceae

description: Roseicitreum antarcticum strain ZS2-28 16S ribosomal RNA gene, partial sequence

description: ASM1468176v1 assembly for Roseicitreum antarcticum ZS2-28

description: IMG-taxon 2617270912 annotated assembly for Roseicitreum antarcticum CGMCC 1.8894


description: domain/bacteria

family: Gammaproteobacteria, not assigned to family

full scientific name: Litorivivens lipolytica Park et al. 2015

genus: Litorivivens

order: Gammaproteobacteria, not assigned to order

species: Litorivivens lipolytica

description: Litorivivens lipolytica strain HJTF-7 16S ribosomal RNA gene, partial sequence

description: ASM1419171v1 assembly for Litorivivens lipolytica CECT 8654


description: domain/bacteria

full scientific name: Mesoplasma corruscae Tully et al. 1994

genus: Mesoplasma

species: Mesoplasma corruscae

synonym: Entomoplasma corruscae

family: Entomoplasmataceae

order: Entomoplasmatales

description: Mesoplasma corruscae 16S ribosomal RNA gene, partial sequence

description: meso03.02 assembly for Mesoplasma corruscae ELCA-2


description: domain/bacteria

family: Vibrionaceae

full scientific name: Vibrio hannami Lee et al. 2019

genus: Vibrio

order: Vibrionales

species: Vibrio hannami

description: Vibrio hannami 16S ribosomal RNA gene, partial sequence

description: ASM2958905v1 assembly for Vibrio hannami KACC 19277


class: Methanobacteria

description: domain/archaea

domain: Archaea

family: Methanobacteriaceae

full scientific name: Methanobacterium uliginosum König 1985

genus: Methanobacterium

keyword: phylum/methanobacteriota

order: Methanobacteriales

phylum: Methanobacteriota

species: Methanobacterium uliginosum

phylum: Euryarchaeota

strain designation: OCM 176, P2St

description: Methanobacterium uliginosum gene for 16S rRNA, partial sequence, strain: NBRC 105232


description: domain/bacteria

family: Oxalobacteraceae

full scientific name: Paraherbaspirillum soli Anandham et al. 2013

genus: Paraherbaspirillum

species: Paraherbaspirillum soli

description: Paraherbaspirillum soli 16S ribosomal RNA gene, partial sequence

description: ASM4265498v1 assembly for Paraherbaspirillum soli KACC 12633


description: domain/bacteria

family: Roseobacteraceae

full scientific name: Palleronia abyssalis Albuquerque et al. 2015

genus: Palleronia

order: Rhodobacterales

species: Palleronia abyssalis

description: Palleronia abyssalis strain 221-F1 16S ribosomal RNA gene, partial sequence

description: P.abyssalisCECT8504_Spades_Prokka assembly for Palleronia abyssalis CECT 8504


description: domain/bacteria

family: Methylobacteriaceae

full scientific name: Microvirga flavescens Zhang et al. 2019

genus: Microvirga

species: Microvirga flavescens

description: Microvirga flavescens 16S ribosomal RNA gene, partial sequence

description: ASM329012v1 assembly for Microvirga flavescens c27j1


description: domain/bacteria

family: Bartonellaceae

full scientific name: Bartonella clarridgeiae Lawson and Collins 1996

genus: Bartonella

species: Bartonella clarridgeiae

strain designation: Houston-2 cat

description: Bartonella sp. DNA for 16S ribosomal RNA

description: ASM51818v1 assembly for Bartonella clarridgeiae ATCC 51734


class: Vampirovibrionophyceae

description: domain/bacteria

family: Vampirovibrionaceae

full scientific name: Vampirovibrio chlorellavorus (ex Gromov and Mamkayeva 1972) Gromov and Mamkayeva 1980

genus: Vampirovibrio

keyword: phylum/cyanobacteriota

order: Vampirovibrionales

phylum: Cyanobacteriota

species: Vampirovibrio chlorellavorus

synonym: Bdellovibrio chlorellavorus

class: Oligoflexia

family: Bdellovibrionaceae

order: Bdellovibrionales

description: Vampirovibrio chlorellavorus ATCC:29753 16S ribosomal RNA gene, partial sequence

description: ASM185852v1 assembly for Vampirovibrio chlorellavorus


description: domain/bacteria

family: Bacillaceae

full scientific name: Aquibacillus halophilus Amoozegar et al. 2014

genus: Aquibacillus

species: Aquibacillus halophilus

description: Aquibacillus halophilus strain B6B 16S ribosomal RNA gene, partial sequence

description: ASM964974v1 assembly for Aquibacillus halophilus B6B


description: domain/bacteria

family: Ectothiorhodospiraceae

full scientific name: Spiribacter salinus León et al. 2014

genus: Spiribacter

order: Chromatiales

species: Spiribacter salinus

description: ASM31957v2 assembly for Spiribacter salinus M19-40


description: domain/archaea

full scientific name: Methanobrevibacter acididurans Savant et al. 2002

genus: Methanobrevibacter

species: Methanobrevibacter acididurans

strain designation: ATM, MCM B 613, OCM 804

description: Methanobrevibacter sp. ATM 16S ribosomal RNA gene, partial sequence

description: 117775 assembly for Methanobrevibacter acididurans DSM 15163


description: domain/bacteria

full scientific name: Thiorhodospira sibirica Bryantseva et al. 1999

genus: Thiorhodospira

species: Thiorhodospira sibirica

strain designation: Gorlenko: A12

description: Thiorhodospira sibirica 16S rRNA gene

description: ASM22772v3 assembly for Thiorhodospira sibirica ATCC 700588

description: Thiorhodospira sibirica ATCC 700588


description: domain/bacteria

full scientific name: Ruegeria meonggei Kim et al. 2014

genus: Ruegeria

species: Ruegeria meonggei

description: Ruegeria meonggei strain MA-E2-3 16S ribosomal RNA gene, partial sequence

description: R.meonggei_CECT8411_Spades_Prokka assembly for Ruegeria meonggei CECT 8411


description: domain/bacteria

family: Sphingomonadaceae

full scientific name: Sphingomonas fonticola Sheu et al. 2015

genus: Sphingomonas

order: Sphingomonadales

species: Sphingomonas fonticola

description: Sphingomonas sp. TNR-2 partial 16S rRNA gene, type strain TNR-2T


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Mesonia sediminis Wang et al. 2016

genus: Mesonia

species: Mesonia sediminis

description: Mesonia sediminis strain MF326 16S ribosomal RNA gene, partial sequence

description: ASM4268470v1 assembly for Mesonia sediminis KCTC 42255


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Paenibacillus xanthinilyticus Kim et al. 2015

genus: Paenibacillus

species: Paenibacillus xanthinilyticus

description: Paenibacillus xanthinilyticus strain 11N27 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Nitrobacteraceae

full scientific name: Bradyrhizobium guangdongense Li et al. 2015

genus: Bradyrhizobium

species: Bradyrhizobium guangdongense

description: Bradyrhizobium guangdongense strain CGMCC 1.15034 16S ribosomal RNA gene, partial sequence

description: Bradyrhizobium guangdongense strain CCBAU 51649 16S ribosomal RNA gene, partial sequence.

description: ASM411497v1 assembly for Bradyrhizobium guangdongense CCBAU 51649

description: ASM1464051v1 assembly for Bradyrhizobium guangdongense CGMCC 1.15034


class: Sphingobacteriia

description: domain/bacteria

family: Sphingobacteriaceae

full scientific name: Sphingobacterium antarcticum corrig. Shivaji et al. 1992

genus: Sphingobacterium

order: Sphingobacteriales

species: Sphingobacterium antarcticum

synonym: Sphingobacterium antarcticus

synonym: Pedobacter antarcticus

synonym: Pedobacter piscium

synonym: Sphingobacterium piscium

full scientific name: Pedobacter antarcticus (Shivaji et al. 1992) Farfán et al. 2014

genus: Pedobacter

species: Pedobacter antarcticus

description: Sphingobacterium antarcticum strain 4BY 16S ribosomal RNA gene, partial sequence

description: ASM72288v1 assembly for Pedobacter antarcticus 4BY

description: IMG-taxon 2597490344 annotated assembly for Pedobacter antarcticus ATCC 51969


description: domain/bacteria

family: Zoogloeaceae

full scientific name: Azoarcus toluclasticus Song et al. 1999

genus: Azoarcus

order: Rhodocyclales

species: Azoarcus toluclasticus

synonym: Aromatoleum toluclasticum

description: Azoarcus toluclasticus strain MF63 16S ribosomal RNA, partial sequence

description: ASM37824v1 assembly for Aromatoleum toluclasticum ATCC 700605 MF63


description: domain/bacteria

full scientific name: Tenacibaculum caenipelagi Park and Yoon 2014

genus: Tenacibaculum

species: Tenacibaculum caenipelagi

description: Tenacibaculum caenipelagi strain HJ-26M from South Korea 16S ribosomal RNA gene, partial sequence

description: ASM436300v1 assembly for Tenacibaculum caenipelagi CECT 8283


description: domain/bacteria

full scientific name: Vibrio hyugaensis Urbanczyk et al. 2015

genus: Vibrio

species: Vibrio hyugaensis

description: Vibrio hyugaensis gene for 16S ribosomal RNA, partial sequence, strain: 090810a

description: ASM81843v1 assembly for Vibrio hyugaensis 090810a

description: ASM290665v1 assembly for Vibrio hyugaensis 090810a


description: domain/bacteria

family: Erythrobacteraceae

full scientific name: Altererythrobacter aquiaggeris Jung et al. 2017

genus: Altererythrobacter

species: Altererythrobacter aquiaggeris

synonym: Aestuarierythrobacter aquiaggeris

description: Altererythrobacter aquiaggeris 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Sphingobacterium corticibacter Li et al. 2019

species: Sphingobacterium corticibacter

description: Sphingobacterium corticibacter strain 2c-3 16S ribosomal RNA gene, partial sequence

description: ASM307663v1 assembly for Sphingobacterium corticibacter 2c-3


description: domain/bacteria

family: Paracoccaceae

full scientific name: Paracoccus lutimaris Jung et al. 2014

genus: Paracoccus

species: Paracoccus lutimaris

family: Rhodobacteraceae

description: Paracoccus lutimaris strain HDM-25 16S ribosomal RNA gene, partial sequence

description: ASM333756v1 assembly for Paracoccus lutimaris CECT 8525


description: domain/bacteria

family: Nitrosomonadaceae

full scientific name: Nitrosomonas stercoris Nakagawa and Takahashi 2017

genus: Nitrosomonas

order: Spirillales

species: Nitrosomonas stercoris

order: Nitrosomonadales

strain designation: KYUHI-S

description: Nitrosomonas stercoris gene for 16S ribosomal RNA, partial sequence

description: ASM674278v1 assembly for Nitrosomonas stercoris KYUHI-S


description: domain/bacteria

family: Caulobacteraceae

full scientific name: Phenylobacterium parvum Baek et al. 2019

genus: Phenylobacterium

order: Caulobacterales

species: Phenylobacterium parvum

description: Phenylobacterium parvum strain HYN0004 16S ribosomal RNA gene, partial sequence

description: ASM315083v1 assembly for Phenylobacterium parvum HYN0004


description: domain/bacteria

family: Pectobacteriaceae

full scientific name: Brenneria roseae subsp. americana Brady et al. 2015

genus: Brenneria

order: Enterobacterales

species: Brenneria roseae subsp. americana

strain designation: FRB 223

description: Brenneria roseae subsp. americana strain FRB 223 16S ribosomal RNA gene, partial sequence

description: ASM311581v1 assembly for Brenneria roseae subsp. americana LMG 27715


description: domain/bacteria

family: Colwelliaceae

full scientific name: Thalassotalea sediminis Xu et al. 2017

genus: Thalassotalea

order: Alteromonadales

species: Thalassotalea sediminis

description: Thalassotalea sediminis strain N211 16S ribosomal RNA gene, partial sequence

description: ASM3029591v1 assembly for Thalassotalea sediminis KCTC 42588


description: domain/bacteria

family: Aeromonadaceae

full scientific name: Aeromonas hydrophila (Chester 1901) Stanier 1943 (Approved Lists 1980)

genus: Aeromonas

order: Aeromonadales

species: Aeromonas hydrophila

synonym: Pseudomonas hydrophila

synonym: Bacillus hydrophilus

full scientific name: Aeromonas hydrophila (Chester 1901) Stanier 1943 emend. Beaz-Hidalgo et al. 2013

phylum: Proteobacteria

strain designation: LUHS TK-19-2

type strain: no


description: domain/bacteria

full scientific name: Aeromonas media Allen et al. 1983

species: Aeromonas media


description: domain/bacteria

family: Comamonadaceae

full scientific name: Variovorax paradoxus (Davis 1969) Willems et al. 1991

genus: Variovorax

order: Burkholderiales

species: Variovorax paradoxus

synonym: Alcaligenes paradoxus


description: domain/bacteria

full scientific name: Sphingobacterium paramultivorum Wang et al. 2021

species: Sphingobacterium paramultivorum

full scientific name: Sphingobacterium paramultivorum

phylum: Bacteroidetes

description: ASM966035v1 assembly for Sphingobacterium paramultivorum w15


description: domain/bacteria

family: Micrococcaceae

full scientific name: <I>Arthrobacter</I> Conn and Dimmick 1947 (Approved Lists 1980)

genus: Arthrobacter

order: Micrococcales

species: Arthrobacter sp.

synonym: Crystallibacter

class: Actinobacteria

full scientific name: Arthrobacter sp.

phylum: Actinobacteria

description: Arthrobacter sp. 11W110_air partial 16S rRNA gene, isolate 11W110_air

description: PRJEB5507_assembly_1 assembly for Arthrobacter saudimassiliensis 11W110_air


description: domain/bacteria


description: domain/bacteria

description: Arthrobacter sp. JSM 2215039 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Arthrobacter sp. 68b partial 16S rRNA gene


description: domain/bacteria

full scientific name: Arthrobacter gallicola Pallen 2024

species: Arthrobacter gallicola

synonym: Arthrobacter gallicola

full scientific name: Arthrobacter gallicola


description: domain/bacteria

full scientific name: Arthrobacter pullicola Pallen 2024

species: Arthrobacter pullicola

synonym: Arthrobacter pullicola

full scientific name: Arthrobacter pullicola


class: Clostridia

description: domain/bacteria

family: Peptoniphilaceae

full scientific name: Lagierella massiliensis Traore et al. 2021

genus: Lagierella

order: Tissierellales

species: Lagierella massiliensis

synonym: Lagierella massiliensis

full scientific name: Lagierella massiliensis Traore et al. 2016

order: Eubacteriales

phylum: Firmicutes


description: domain/bacteria

family: Caryophanaceae

full scientific name: Lysinibacillus fusiformis (Priest et al. 1989 ex Meyer and Gottheil 1901) Ahmed et al. 2007

genus: Lysinibacillus

order: Caryophanales

species: Lysinibacillus fusiformis

synonym: Bacillus fusiformis

full scientific name: Lysinibacillus fusiformis (Priest et al. 1989) Ahmed et al. 2007

description: Lysinibacillus fusiformis strain H1k 16S ribosomal RNA gene, partial sequence

description: ASM63327v1 assembly for Lysinibacillus fusiformis H1k


description: domain/bacteria

full scientific name: Paenibacillus lautus (Nakamura 1984 ex Batchelor 1919) Heyndrickx et al. 1996

genus: Paenibacillus

species: Paenibacillus lautus

synonym: Bacillus lautus

full scientific name: Paenibacillus lautus (Nakamura 1984) Heyndrickx et al. 1996


description: domain/bacteria

family: Bacillaceae

full scientific name: Bacillus licheniformis (Weigmann 1898) Chester 1901 (Approved Lists 1980)

genus: Bacillus

species: Bacillus licheniformis

synonym: Clostridium licheniforme


description: domain/bacteria

full scientific name: Bacillus licheniformis (Weigmann 1898) Chester 1901

description: Bacillus licheniformis strain DSM 111625 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria


description: domain/bacteria

strain designation: Turin4- S28


description: domain/bacteria

full scientific name: Priestia megaterium (de Bary 1884) Gupta et al. 2020

genus: Priestia

species: Priestia megaterium

synonym: Bacillus megaterium


description: domain/bacteria

strain designation: Turin11- W18


description: domain/bacteria

full scientific name: Peribacillus simplex (Priest et al. 1989 ex Meyer and Gottheil 1901) Patel and Gupta 2020

genus: Peribacillus

species: Peribacillus simplex

synonym: Bacillus simplex

full scientific name: Peribacillus simplex (Priest et al. 1989) Patel and Gupta 2020


description: domain/bacteria

full scientific name: <I>Bacillus</I> Cohn 1872 (Approved Lists 1980)

species: Bacillus sp.

synonym: Quasibacillus

synonym: Weizmannia

synonym: Maribacillus

synonym: Niallia

full scientific name: Bacillus sp.


description: domain/bacteria

strain designation: B-jedd

description: PRJEB5955_assembly_1 assembly for Bacillus sp. B-jedd


description: domain/bacteria

strain designation: SJS

description: Bacillus sp. SJS 16S ribosomal RNA gene, partial sequence.

description: ASM73248v2 assembly for Bacillus sp. SJS


description: domain/bacteria

description: Bacillus sp. B15-48 partial 16S rRNA gene, strain B15-48

description: ASM1687975v1 assembly for Bacillus sp. B15-48


description: domain/bacteria

strain designation: AP, LEP1448


description: domain/bacteria

strain designation: SP


description: domain/bacteria

full scientific name: Bacillus norwichensis Pallen 2024

species: Bacillus norwichensis

synonym: Bacillus norwichensis

full scientific name: Bacillus norwichensis


class: Phycisphaerae

description: domain/bacteria

family: Phycisphaeraceae

full scientific name: Mucisphaera calidilacus Kallscheuer et al. 2022

genus: Mucisphaera

keyword: phylum/planctomycetota

order: Phycisphaerales

phylum: Planctomycetota

species: Mucisphaera calidilacus

full scientific name: Mucisphaera calidilacus

phylum: Planctomycetes

description: ASM774807v1 assembly for Mucisphaera calidilacus Pan265


description: domain/bacteria

full scientific name: <I>Domibacillus</I> Seiler et al. 2013

genus: Domibacillus

species: Domibacillus sp.

full scientific name: Domibacillus sp.

description: Domibacillus sp. GBT21-2 16S ribosomal RNA gene, partial sequence


class: Bacteroidia

description: domain/bacteria

family: Tannerellaceae

genus: Parabacteroides

order: Bacteroidales

species: Parabacteroides distasonis

synonym: Bacteroides distasonis

full scientific name: Parabacteroides distasonis (Eggerth and Gagnon 1933) Sakamoto and Benno 2006 emend. Hahnke et al. 2016


description: domain/bacteria

full scientific name: Parabacteroides distasonis (Eggerth and Gagnon 1933) Sakamoto and Benno 2006

description: Parabacteroides distasonis strain DSM 111137 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Bacteroidaceae

full scientific name: <I>Bacteroides</I> Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Bacteroides

species: Bacteroides sp.

synonym: Capsularis

full scientific name: Bacteroides sp.


description: domain/bacteria

description: Bact_sp_1_1_6_V2 assembly for Bacteroides thetaiotaomicron 1_1_6


description: domain/bacteria

description: Bacteroides_sp_1_1_30_V1 assembly for Bacteroides sp. 1_1_30

description: ASM2098271v1 assembly for Bacteroides sp. 1_1_30


description: domain/bacteria

description: ASM16255v1 assembly for Bacteroides sp. 3_1_23


description: domain/bacteria

description: ASM16253v1 assembly for Parabacteroides sp. 20_3


description: domain/bacteria

full scientific name: Bacteroides muris Fokt et al. 2023

species: Bacteroides muris

synonym: Bacteroides muris

full scientific name: Bacteroides muris


description: domain/bacteria

full scientific name: Bacteroides thetaiotaomicron (Distaso 1912) Castellani and Chalmers 1919 (Approved Lists 1980)

species: Bacteroides thetaiotaomicron

synonym: Bacteroides fragilis subsp. thetaiotaomicron

synonym: Bacillus thetaiotaomicron

full scientific name: Bacteroides thetaiotaomicron (Distaso 1912) Castellani and Chalmers 1919 emend. Hahnke et al. 2016


description: domain/bacteria

family: Bifidobacteriaceae

genus: Bifidobacterium

order: Bifidobacteriales

species: Bifidobacterium globosum

full scientific name: Bifidobacterium globosum (ex Scardovi et al. 1969) Biavati et al. 1982 emend. Nouioui et al. 2018

description: Bifidobacterium pseudolongum subsp. globosum strain DSM 105315 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Brevibacteriaceae

full scientific name: Brevibacterium casei Collins et al. 1983

genus: Brevibacterium

species: Brevibacterium casei


description: domain/bacteria

full scientific name: <I>Brevibacterium</I> Breed 1953 (Approved Lists 1980)

species: Brevibacterium sp.

full scientific name: Brevibacterium sp.


description: domain/bacteria

full scientific name: Brevibacterium gallinarum Pallen 2024

species: Brevibacterium gallinarum

synonym: Brevibacterium gallinarum

full scientific name: Brevibacterium gallinarum


culture collection no.: DSM 104007, Marseille-P3078

class: Coriobacteriia

description: domain/bacteria

family: Eggerthellaceae

full scientific name: Arabiibacter massiliensis Lo et al. 2023

genus: Arabiibacter

order: Eggerthellales

species: Arabiibacter massiliensis

full scientific name: Arabiibacter massiliensis Lo et al. 2022

description: Gordonibacter sp. Marseille-P3078 partial 16S rRNA gene, strain Marseille-P3078

description: PRJEB19971 assembly for Arabiibacter massiliensis Marseille-P3078


class: Flavobacteriia

description: domain/bacteria

family: Flavobacteriaceae

full scientific name: <I>Flavobacterium</I> Bergey et al. 1923 (Approved Lists 1980)

genus: Flavobacterium

order: Flavobacteriales

species: Flavobacterium sp.

full scientific name: Flavobacterium sp.

strain designation: JRM

description: ASM81298v1 assembly for Flavobacterium sp. JRM


description: domain/bacteria

family: Clostridiaceae

full scientific name: Clostridium butyricum Prazmowski 1880 (Approved Lists 1980)

genus: Clostridium

species: Clostridium butyricum

full scientific name: Clostridium butyricum Prazmowski 1880

description: Clostridium butyricum strain DSM 107392 16S ribosomal RNA gene, partial sequence.


family: Weeksellaceae

full scientific name: Kaistella zaccaria

genus: Kaistella

order: Not assigned to order

species: Kaistella zaccaria

strain designation: JJC

description: Flavobacteriaceae bacterium JJC 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: <I>Corynebacterium</I> Lehmann and Neumann 1896 (Approved Lists 1980)

genus: Corynebacterium

order: Mycobacteriales

species: Corynebacterium sp.

synonym: Turicella

synonym: Bacterionema

synonym: Caseobacter

full scientific name: Corynebacterium sp.


class: Desulfovibrionia

description: domain/bacteria

family: Desulfovibrionaceae

full scientific name: <I>Desulfovibrio</I> Kluyver and van Niel 1936 (Approved Lists 1980)

genus: Desulfovibrio

keyword: phylum/thermodesulfobacteriota

order: Desulfovibrionales

phylum: Thermodesulfobacteriota

species: Desulfovibrio sp.

synonym: Desulfomonas

synonym: Aminidesulfovibrio

synonym: Psychrodesulfovibrio

synonym: Frigididesulfovibrio

synonym: Alteridesulfovibrio

class: Deltaproteobacteria

full scientific name: Desulfovibrio sp.

description: Desulfovibrio multispirans strain L5 16S ribosomal RNA gene, partial sequence


class: Bacilli

description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus avium (ex Nowlan and Deibel 1967) Collins et al. 1984

genus: Enterococcus

order: Lactobacillales

species: Enterococcus avium

description: Enterococcus avium strain DSM 106040 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

full scientific name: Enterococcus faecalis (Andrewes and Horder 1906) Schleifer and Kilpper-Bälz 1984

species: Enterococcus faecalis

synonym: Streptococcus faecalis

description: Enterococcus faecalis strain DSM 106192 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Enterococcus faecalis strain DSM 110077 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

full scientific name: Enterococcus gallinarum (Bridge and Sneath 1982) Collins et al. 1984

species: Enterococcus gallinarum

synonym: Streptococcus gallinarum

description: Enterococcus gallinarum strain DSM 106191 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Enterococcus gallinarum strain DSM 111134 16S ribosomal RNA gene, partial sequence.


class: Gammaproteobacteria

description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

order: Enterobacterales

species: Escherichia coli

synonym: Bacillus coli

strain designation: APEC 5211


description: domain/bacteria

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919

strain designation: BWKH 314


description: domain/bacteria

description: Escherichia coli strain DSM 112109 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Escherichia coli strain DSM 112110 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Escherichia coli strain DSM 112111 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Escherichia coli strain DSM 112112 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

strain designation: CLA-AP-10, Cla-AP10, Cla_AP_10

description: Escherichia coli strain DSM 112113 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Escherichia coli strain DSM 112114 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Escherichia coli strain DSM 112116 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Escherichia coli strain DSM 112117 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Escherichia coli strain DSM 112118 16S ribosomal RNA gene, partial sequence.

description: ASM1516073v1 assembly for Escherichia coli EC_550


description: domain/bacteria

description: Escherichia coli strain DSM 112119 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Escherichia coli strain DSM 112120 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Escherichia coli strain DSM 112121 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Escherichia coli strain DSM 112122 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Escherichia coli strain DSM 112123 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Escherichia coli strain DSM 112124 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

strain designation: EcSiggi

description: Escherichia coli strain DSM 112125 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

strain designation: Janvier 1a

description: Escherichia coli strain DSM 112126 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

strain designation: Charles River B11

description: Escherichia coli strain DSM 112127 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria


class: Alphaproteobacteria

description: domain/bacteria

family: Erythrobacteraceae

full scientific name: Alteriqipengyuania abyssalis Tareen et al. 2022

genus: Alteriqipengyuania

order: Sphingomonadales

species: Alteriqipengyuania abyssalis

description: ASM1985718v1 assembly for Alteriqipengyuania abyssalis NZ-12B


description: domain/bacteria

full scientific name: <I>Tenacibaculum</I> Suzuki et al. 2001

genus: Tenacibaculum

phylum: Bacteroidota

species: Tenacibaculum sp.

full scientific name: Tenacibaculum sp.

description: IMG-taxon 2634166900 annotated assembly for Tenacibaculum sp. MAR_2010_89 Mar_2010_89


description: domain/bacteria

description: ASM1927844v1 assembly for Tenacibaculum sp. AHE15PA


description: domain/bacteria

description: ASM1927846v1 assembly for Tenacibaculum sp. AHE14PA


description: domain/bacteria

family: Lactobacillaceae

full scientific name: <I>Lactobacillus</I> Beijerinck 1901 (Approved Lists 1980)

genus: Lactobacillus

species: Lactobacillus sp.

full scientific name: Lactobacillus sp.


description: domain/bacteria

description: Lactobacillus sp. C1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Lactobacillus sp. C4 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Streptococcaceae

full scientific name: Lactococcus lactis (Lister 1873) Schleifer et al. 1986

genus: Lactococcus

species: Lactococcus lactis

synonym: Lactobacillus xylosus

synonym: Bacterium lactis

synonym: Streptococcus lactis

synonym: Streptococcus lactis subsp. diacetilactis

description: Lactococcus lactis strain DSM 110082 16S ribosomal RNA gene, partial sequence.


class: Chroococcophyceae

description: domain/bacteria

family: Gomontiellaceae

full scientific name: Crinalium magnum Fritsch and John 1942

genus: Crinalium

order: Gomontiellales

species: Crinalium magnum

class: Cyanophyceae

full scientific name: Crinalium magnum

phylum: Cyanobacteria


description: domain/bacteria

family: Oculatellaceae

full scientific name: Timaviella edaphica (Elenkin 1949) Vinogradova and Mikhailyuk 2018

genus: Timaviella

order: Oculatellales

species: Timaviella edaphica

synonym: Chroakolemma edaphicum

synonym: Leptolyngbya edaphica

synonym: Pseudophormidium edaphicum

synonym: Chroakolemma edaphica

full scientific name: Timaviella edaphica


description: domain/bacteria


class: Betaproteobacteria

description: domain/bacteria

family: Neisseriaceae

full scientific name: Paralysiella testudinis Busse et al. 2021

genus: Paralysiella

order: Neisseriales

phylum: Pseudomonadota

species: Paralysiella testudinis

full scientific name: Paralysiella testudinis

description: ASM1689434v1 assembly for Paralysiella testudinis 26B

description: ASM4267928v1 assembly for Paralysiella testudinis CCM 9137


description: domain/bacteria

family: Roseobacteraceae

full scientific name: <I>Pseudosulfitobacter</I> Liang et al. 2022

genus: Pseudosulfitobacter

order: Rhodobacterales

species: Pseudosulfitobacter sp.

family: Rhodobacteraceae

full scientific name: Pseudosulfitobacter sp.

description: ASM333554v1 assembly for Pseudosulfitobacter sp. DSM 107133 PIC-76

description: ASM2278869v1 assembly for Pseudosulfitobacter sp. DSM 107133


class: Actinomycetes

description: domain/bacteria

family: Micrococcaceae

full scientific name: Micrococcus luteus (Schroeter 1872) Cohn 1872 (Approved Lists 1980)

genus: Micrococcus

order: Micrococcales

species: Micrococcus luteus

synonym: Micrococcus yunnanensis

synonym: Bacteridium luteum

synonym: Micrococcus aloeverae

full scientific name: Micrococcus luteus (Schroeter 1872) Cohn 1872 emend. Nouioui et al. 2018


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: <I>Mycobacterium</I> Lehmann and Neumann 1896 (Approved Lists 1980)

genus: Mycobacterium

species: Mycobacterium sp.

synonym: Mycolicibacterium

synonym: Mycolicibacillus

synonym: Mycobacteroides

synonym: Mycolicibacter

full scientific name: Mycobacterium sp.


description: domain/bacteria

full scientific name: Mycobacterium simulans Tortoli et al. 2010

species: Mycobacterium simulans

description: Mycobacterium simulans strain FI-09026 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Mycobacterium sp. A6 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Mycobacterium sp. strain GESEQ-9 16S ribosomal RNA gene, partial sequence

description: ASM1794846v1 assembly for Mycolicibacterium sp. GESEQ-9


description: domain/bacteria

family: Oscillospiraceae

full scientific name: Vescimonas fastidiosa Kitahara et al. 2021

genus: Vescimonas

order: Eubacteriales

phylum: Bacillota

species: Vescimonas fastidiosa

full scientific name: Vescimonas fastidiosa

description: Vescimonas fastidiosa MM35 gene for 16S rRNA, partial sequence

description: ASM1832630v1 assembly for Vescimonas fastidiosa MM35


description: domain/bacteria

family: Nocardiaceae

full scientific name: <I>Nocardia</I> Trevisan 1889 (Approved Lists 1980)

genus: Nocardia

species: Nocardia sp.

synonym: Micropolyspora

full scientific name: Nocardia sp.

strain designation: Isolat Dez 1982


description: domain/bacteria


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: <I>Flavimarina</I> Nedashkovskaya et al. 2015

genus: Flavimarina

species: Flavimarina sp.

full scientific name: Flavimarina sp.

description: ASM73394v1 assembly for Flavimarina sp. Hel_I_48


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Mediterraneibacter catenae Wongkuna et al. 2021

genus: Mediterraneibacter

species: Mediterraneibacter catenae

full scientific name: Mediterraneibacter sp.

species: Mediterraneibacter sp.

description: ASM869104v1 assembly for Mediterraneibacter catenae SW178


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)

genus: Pseudomonas

order: Pseudomonadales

species: Pseudomonas aeruginosa

synonym: Pseudomonas paraeruginosa

synonym: Bacterium aeruginosum

strain designation: PAO1 algC


description: domain/bacteria

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900


description: domain/bacteria

description: ASM2382230v1 assembly for Pseudomonas aeruginosa US449


description: domain/bacteria

family: Atopobiaceae

full scientific name: <I>Olsenella</I> Dewhirst et al. 2001

genus: Olsenella

order: Coriobacteriales

species: Olsenella sp.

synonym: Parafannyhessea

full scientific name: Olsenella sp.


description: domain/bacteria

full scientific name: <I>Pseudomonas</I> Migula 1894 (Approved Lists 1980)

species: Pseudomonas sp.

synonym: Metapseudomonas

synonym: Zestomonas

synonym: Caenipseudomonas

synonym: Phytopseudomonas

synonym: Ectopseudomonas

synonym: Aquipseudomonas

synonym: Geopseudomonas

synonym: Flavimonas

synonym: Chryseomonas

full scientific name: Pseudomonas sp.

description: ASM965961v1 assembly for Pseudomonas haemolytica DSM 108988


description: domain/bacteria


description: domain/bacteria

family: Rhizobiaceae

full scientific name: <I>Rhizobium</I> Frank 1889 (Approved Lists 1980)

genus: Rhizobium

order: Hyphomicrobiales

species: Rhizobium sp.

synonym: Velazquezella

synonym: Arminella

synonym: Martinezella

synonym: Limnomicrobium

synonym: Phytoamicus

synonym: Metarhizobium

synonym: Paenirhizobium

synonym: Peteryoungia

full scientific name: Rhizobium sp.


description: domain/bacteria

full scientific name: Rhodococcus rhodochrous (Zopf 1891) Tsukamura 1974 (Approved Lists 1980)

genus: Rhodococcus

species: Rhodococcus rhodochrous

synonym: Staphylococcus rhodochrous

synonym: Rhodococcus roseus

full scientific name: Rhodococcus rhodochrous (Zopf 1891) Tsukamura 1974 emend. Nouioui et al. 2018

description: Rhodococcus rhodochrous strain G38GP 16S ribosomal RNA gene, partial sequence

description: ASM1535141v1 assembly for Rhodococcus rhodochrous G38GP


description: domain/bacteria

full scientific name: <I>Rhodococcus</I> Zopf 1891 (Approved Lists 1980)

species: Rhodococcus sp.

synonym: Prescottella

synonym: Rhodococcoides

synonym: Prescottia

full scientific name: Rhodococcus sp.

strain designation: NEAU-Alotilan


description: domain/bacteria


description: domain/bacteria

description: ASM400601v1 assembly for Rhodococcus sp. X156


description: domain/bacteria

description: Rhodococcus sp. (in: high G+C Gram-positive bacteria) strain PC20 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Rhodococcus sp. 3HYL 16S ribosomal RNA gene, partial sequence


culture collection no.: DSM 126, Pfennig 1850

description: domain/bacteria

family: Nitrobacteraceae

full scientific name: Rhodopseudomonas palustris (Molisch 1907) van Niel 1944 (Approved Lists 1980)

genus: Rhodopseudomonas

species: Rhodopseudomonas palustris

synonym: Rhodopseudomonas rutila

synonym: Rhodobacillus palustris

full scientific name: Rhodopseudomonas palustris (Molisch 1907) van Niel 1944 emend. Venkata Ramana et al. 2012

description: R.palustris 16S rRNA gene

description: R.palustris 16S rRNA gene

description: ASM293715v1 assembly for Rhodopseudomonas palustris DSM 126


description: domain/bacteria

family: Bacillaceae

full scientific name: Sutcliffiella rhizosphaerae Kämpfer et al. 2022

genus: Sutcliffiella

order: Caryophanales

species: Sutcliffiella rhizosphaerae

description: JJ-125 assembly for Sutcliffiella rhizosphaerae CIP 111883

description: Bacillus sp. JJ-125 strain CIP111883

description: Bacillus sp. JJ-125 strain CIP111883


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987

genus: Salmonella

species: Salmonella enterica

synonym: Bacillus typhimurium

synonym: Bacillus enteritidis

synonym: Salmonella enteritidis

synonym: Salmonella paratyphi

synonym: Salmonella typhi

synonym: Salmonella typhimurium

synonym: Bacillus typhi

synonym: Bacillus choleraesuis

synonym: Salmonella choleraesuis


description: domain/bacteria

description: 47972_E02 assembly for Salmonella enterica NCTC10436


description: domain/bacteria


description: domain/bacteria

family: Carnobacteriaceae

full scientific name: <I>Marinilactibacillus</I> Ishikawa et al. 2003

genus: Marinilactibacillus

species: Marinilactibacillus sp.

full scientific name: Marinilactibacillus sp.


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus capitis Kloos and Schleifer 1975 (Approved Lists 1980)

genus: Staphylococcus

species: Staphylococcus capitis

description: ASM2527269v1 assembly for Staphylococcus capitis subsp. capitis K1-2-2-23


description: domain/bacteria

full scientific name: Staphylococcus capitis Kloos and Schleifer 1975

description: ASM2527281v1 assembly for Staphylococcus capitis subsp. capitis H17


description: domain/bacteria

full scientific name: <I>Staphylococcus</I> Rosenbach 1884 (Approved Lists 1980)

species: Staphylococcus sp.

synonym: Mammaliicoccus

full scientific name: Staphylococcus sp.


description: domain/bacteria

full scientific name: Staphylococcus argenteus Tong et al. 2015

species: Staphylococcus argenteus

synonym: Staphylococcus singaporensis


description: domain/bacteria

full scientific name: Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980)

species: Staphylococcus aureus

synonym: Staphylococcus aureus subsp. anaerobius

synonym: Staphylococcus roterodami

description: EMCR19.fasta.gz assembly for Staphylococcus roterodami


culture collection no.: DSM 102861, Marseille-P2600

description: domain/bacteria

full scientific name: Peribacillus massiliglaciei Patel and Gupta 2020

genus: Peribacillus

species: Peribacillus massiliglaciei

synonym: Bacillus massiliglaciei

full scientific name: Peribacillus sp.

species: Peribacillus sp.

description: Bacillus sp. Marseille-P2600 partial 16S rRNA gene, strain Marseille-P2600T

description: PRJEB15625 assembly for Bacillus massiliglaciei Marseille-P2600


description: domain/bacteria

full scientific name: <I>Peribacillus</I> Patel and Gupta 2020

synonym: Paraperibacillus


description: domain/bacteria

full scientific name: Staphylococcus xylosus Schleifer and Kloos 1975 (Approved Lists 1980)

species: Staphylococcus xylosus

description: Staphylococcus xylosus 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus acidominimus Ayers and Mudge 1922 (Approved Lists 1980)

genus: Streptococcus

species: Streptococcus acidominimus

strain designation: S128, BM1-BWCA-si-MA-A, CLA-TS-S128

description: Streptococcus acidominimus strain DSM 108490 16S ribosomal RNA gene, partial sequence.


class: Not assigned to order

family: Not assigned to family

full scientific name: unclassified bacterium

genus: unclassified

phylum: Not assigned to order

species: unclassified bacterium


description: domain/bacteria

family: Desulfitobacteriaceae

full scientific name: Desulfosporosinus metallidurans Panova et al. 2021

genus: Desulfosporosinus

species: Desulfosporosinus metallidurans

family: Peptococcaceae

full scientific name: Desulfosporosinus metallidurans

strain designation: OL

description: Desulfosporosinus metallidurans strain OL 16S ribosomal RNA gene, partial sequence


description: Caproiciproducens sp. strain 7D4C2 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces albidoflavus (Rossi Doria 1891) Waksman and Henrici 1948 (Approved Lists 1980)

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces albidoflavus

synonym: Streptomyces griseus subsp. solvifaciens

synonym: Cladothrix odorifera

synonym: Streptomyces canescens

synonym: Streptomyces felleus

synonym: Actinomyces sampsonii

synonym: Streptomyces sampsonii

synonym: Streptomyces globisporus subsp. caucasicus

synonym: Actinomyces globisporus subsp. caucasicus

synonym: Streptomyces champavatii

synonym: Streptomyces odorifer

synonym: Streptothrix coelicolor

synonym: Streptomyces limosus

synonym: Streptomyces coelicolor

synonym: Streptotrix albidoflava

full scientific name: Streptomyces albidoflavus (Rossi Doria 1891) Waksman and Henrici 1948 emend. Nouioui et al. 2018


description: domain/bacteria

full scientific name: Streptomyces cavourensis subsp. cavourensis Skarbek and Brady 1978 (Approved Lists 1980)


description: domain/bacteria

family: Microbacteriaceae

full scientific name: <I>Cryobacterium</I> Suzuki et al. 1997

genus: Cryobacterium

species: Cryobacterium sp.

full scientific name: Cryobacterium sp.


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Paenibacillus allorhizoplanae Kämpfer et al. 2023

genus: Paenibacillus

species: Paenibacillus allorhizoplanae

full scientific name: Paenibacillus allorhizoplanae Kämpfer et al. 2022

description: CIP111891 assembly for Paenibacillus allorhizoplanae CIP 111891


class: Thermoleophilia

description: domain/bacteria

family: Capillimicrobiaceae

full scientific name: Capillimicrobium parvum Vieira et al. 2022

genus: Capillimicrobium

order: Solirubrobacterales

species: Capillimicrobium parvum

description: Capillimicrobium parvum strain 0166_1 16S ribosomal RNA gene, partial sequence.

description: ASM2117204v1 assembly for Capillimicrobium parvum 0166_1


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium gallinarum Pallen 2024

genus: Corynebacterium

order: Mycobacteriales

species: Corynebacterium gallinarum

synonym: Corynebacterium gallinarum

class: Actinobacteria

full scientific name: Corynebacterium gallinarum

description: ASM1483704v1 assembly for Corynebacterium gallinarum Sa1YVA5


description: domain/bacteria

full scientific name: <I>Streptomyces</I> Waksman and Henrici 1943 (Approved Lists 1980)

species: Streptomyces sp.

synonym: Chainia

synonym: Actinacidiphila

synonym: Kitasatoa

synonym: Actinopycnidium

synonym: Elytrosporangium

synonym: Microellobosporia

synonym: Actinosporangium

synonym: Streptoverticillium

synonym: Microechinospora

synonym: Carbonactinospora

full scientific name: Streptomyces sp.


description: domain/bacteria

full scientific name: Streptomyces typhae Peng et al. 2025

species: Streptomyces typhae

description: Streptomyces typhae strain p1417 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Sutterellaceae

full scientific name: Parasutterella muris Afrizal et al. 2025

genus: Parasutterella

order: Burkholderiales

species: Parasutterella muris

full scientific name: Parasutterella muris

strain designation: CLA-SR-PSM1-37, RA1, CLa-RA-1

description: Parasutterella_sp_nov_DSM108034 assembly for Parasutterella muris DSM 108034


description: domain/bacteria

description: ASM976791v1 assembly for Parasutterella muris NM82_D38


description: domain/bacteria

full scientific name: Phytobacter palmae Madhaiyan et al. 2020

genus: Phytobacter

species: Phytobacter palmae


description: domain/bacteria

description: Phytobacter palmae strain S29 16S ribosomal RNA gene, partial sequence

description: IMG-taxon 2651870173 annotated assembly for Phytobacter palmae S29


description: domain/bacteria

family: Lysobacteraceae

full scientific name: Lysobacter chengduensis Wen et al. 2016

genus: Lysobacter

order: Lysobacterales

species: Lysobacter chengduensis

description: Lysobacter sp. CF21 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Bacillus rhizoplanae Kämpfer et al. 2022

genus: Bacillus

species: Bacillus rhizoplanae

description: JJ-63 assembly for Bacillus rhizoplanae CIP 111899

description: Bacillus sp. JJ-63 strain CIP111899

description: Bacillus sp. JJ-63 strain CIP111899


description: domain/bacteria

family: Cytobacillaceae

full scientific name: Pseudoneobacillus rhizosphaerae Kämpfer et al. 2022

genus: Pseudoneobacillus

species: Pseudoneobacillus rhizosphaerae


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Furfurilactobacillus milii Simpson et al. 2022

genus: Furfurilactobacillus

order: Lactobacillales

species: Furfurilactobacillus milii


class: Deinococci

description: domain/bacteria

family: Thermaceae

full scientific name: <I>Thermus</I> Brock and Freeze 1969 (Approved Lists 1980)

genus: Thermus

keyword: phylum/deinococcota

order: Thermales

phylum: Deinococcota

species: Thermus sp.

full scientific name: Thermus sp.

phylum: Deinococcus-Thermus

description: Thermus sp. TH1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Cytobacillus stercorigallinarum Pallen 2024

genus: Cytobacillus

species: Cytobacillus stercorigallinarum

synonym: Cytobacillus stercorigallinarum

family: Bacillaceae

full scientific name: Cytobacillus stercorigallinarum

description: ASM1483649v1 assembly for Cytobacillus stercorigallinarum Sa5YUA1


class: Planctomycetia

description: domain/bacteria

family: Pirellulaceae

full scientific name: Crateriforma conspicua Peeters et al. 2021

genus: Crateriforma

order: Pirellulales

species: Crateriforma conspicua

family: Planctomycetaceae

full scientific name: Crateriforma conspicua Peeters et al. 2020

order: Not assigned to order

strain designation: Pan14r, pan14rosa

description: ASM785987v1 assembly for Crateriforma conspicua Pan14r


description: domain/bacteria

strain designation: AV4, V7

description: ASM786021v1 assembly for Crateriforma conspicua V7


description: domain/bacteria

family: Vibrionaceae

full scientific name: <I>Vibrio</I> Pacini 1854 (Approved Lists 1980)

genus: Vibrio

order: Vibrionales

species: Vibrio sp.

synonym: Allomonas

synonym: Beneckea

synonym: Lucibacterium

full scientific name: Vibrio sp.

description: ASM287691v1 assembly for Vibrio sp. 10N.261.49.E11


description: domain/bacteria

description: ASM287736v1 assembly for Vibrio sp. 10N.261.55.A7


description: domain/bacteria

full scientific name: <I>Salinibacterium</I> Han et al. 2003

genus: Salinibacterium

phylum: Actinomycetota

species: Salinibacterium sp.

full scientific name: Salinibacterium sp.

description: Salinibacterium sp. NCCP-695 gene for 16S ribosomal RNA, partial sequence.


description: domain/bacteria

family: Yersiniaceae

full scientific name: Yersinia enterocolitica (Schleifstein and Coleman 1939) Frederiksen 1964 (Approved Lists 1980)

genus: Yersinia

order: Enterobacterales

species: Yersinia enterocolitica

synonym: Bacterium enterocoliticum

description: Yersinia enterocolitica strain DSM 110076 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

full scientific name: Lactobacillus intestinalis (ex Hemme 1974) Fujisawa et al. 1990

genus: Lactobacillus

species: Lactobacillus intestinalis

description: Lactobacillus intestinalis strain DSM 107393 16S ribosomal RNA gene, partial sequence.


class: Bacteroidia

description: domain/bacteria

family: Bacteroidaceae

full scientific name: Bacteroides uniformis Eggerth and Gagnon 1933 (Approved Lists 1980)

genus: Bacteroides

order: Bacteroidales

species: Bacteroides uniformis

full scientific name: Bacteroides uniformis Eggerth and Gagnon 1933 emend. Hahnke et al. 2016

description: Bacteroides uniformis strain DSM 110080 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

full scientific name: <I>Anaerobacillus</I> Zavarzina et al. 2010

genus: Anaerobacillus

species: Anaerobacillus sp.

full scientific name: Anaerobacillus sp.


description: domain/bacteria

family: Moraxellaceae

full scientific name: Acinetobacter pecorum Pallen 2024

genus: Acinetobacter

species: Acinetobacter pecorum

synonym: Acinetobacter pecorum

full scientific name: Acinetobacter pecorum


description: domain/bacteria

full scientific name: Moraxella osloensis Bøvre and Henriksen 1967 (Approved Lists 1980)

genus: Moraxella

species: Moraxella osloensis

synonym: Faucicola osloensis


description: domain/bacteria

family: Sphingomonadaceae

full scientific name: <I>Sphingomonas</I> Yabuuchi et al. 1990

genus: Sphingomonas

order: Sphingomonadales

species: Sphingomonas sp.

synonym: Alterirhizorhabdus

synonym: Paraquisediminimonas

synonym: Novistakelama

synonym: Parastakelama

synonym: Alteristakelama

synonym: Pseudostakelama

synonym: Alterisphingomonas

synonym: Solisphingomonas

synonym: Parayabuuchia

synonym: Humisphingomonas

synonym: Pseudosphingomonas

synonym: Neorhizorhabdus

synonym: Parasphingomonas

synonym: Flavisphingomonas

synonym: Edaphosphingomonas

synonym: Pararhizorhabdus

synonym: Alteriyabuuchia

synonym: Alterisphingopyxis

full scientific name: Sphingomonas sp.


description: domain/bacteria

family: Nitrobacteraceae

full scientific name: <I>Bradyrhizobium</I> Jordan 1982

genus: Bradyrhizobium

species: Bradyrhizobium sp.

synonym: Agromonas

full scientific name: Bradyrhizobium sp.

description: ASM2235474v1 assembly for Bradyrhizobium sp. I71


description: domain/bacteria

family: Bartonellaceae

full scientific name: Ochrobactrum gallinarum Pallen 2024

genus: Ochrobactrum

species: Ochrobactrum gallinarum

synonym: Ochrobactrum gallinarum

family: Brucellaceae

full scientific name: Ochrobactrum gallinarum


description: domain/bacteria

full scientific name: Luteimonas colneyensis Pallen 2024

genus: Luteimonas

species: Luteimonas colneyensis

synonym: Luteimonas colneyensis

full scientific name: Luteimonas colneyensis

description: ASM1483666v1 assembly for Luteimonas colneyensis Sa2BVA3


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Escherichia whittamii Pallen 2024

genus: Escherichia

species: Escherichia whittamii

synonym: Escherichia whittamii

full scientific name: Escherichia whittamii

description: ASM1483671v1 assembly for Escherichia whittamii Sa2BVA5


description: domain/bacteria

family: Caryophanaceae

full scientific name: <I>Psychrobacillus</I> Krishnamurthi et al. 2011

genus: Psychrobacillus

species: Psychrobacillus sp.

full scientific name: Psychrobacillus sp.


description: domain/bacteria

full scientific name: Acinetobacter baumannii Bouvet and Grimont 1986

order: Pseudomonadales

species: Acinetobacter baumannii


description: domain/bacteria

full scientific name: Acinetobacter radioresistens Nishimura et al. 1988

species: Acinetobacter radioresistens

description: ASM2313067v1 assembly for Acinetobacter radioresistens DSM 108289


description: domain/bacteria

description: ASM2313061v1 assembly for Acinetobacter radioresistens DSM 108290


description: domain/bacteria

description: ASM2313063v1 assembly for Acinetobacter radioresistens DSM 108291


description: domain/bacteria

description: ASM2313059v1 assembly for Acinetobacter radioresistens DSM 108292


description: domain/bacteria

description: ASM2313055v1 assembly for Acinetobacter radioresistens DSM 108293


description: domain/bacteria

description: ASM2313056v1 assembly for Acinetobacter radioresistens DSM 108294


description: domain/bacteria

description: ASM2312772v1 assembly for Acinetobacter radioresistens DSM 108295


description: domain/bacteria

description: ASM2313049v1 assembly for Acinetobacter radioresistens DSM 108296


description: domain/bacteria

description: ASM2312771v1 assembly for Acinetobacter radioresistens DSM 108297


description: domain/bacteria

description: ASM2312765v1 assembly for Acinetobacter radioresistens DSM 108349


description: domain/bacteria

description: ASM2312766v1 assembly for Acinetobacter radioresistens DSM 108719


description: domain/bacteria

description: ASM2312767v1 assembly for Acinetobacter radioresistens DSM 108820


description: domain/bacteria

description: ASM2622952v1 assembly for Acinetobacter radioresistens DSM 109999


description: domain/bacteria

description: ASM2622946v1 assembly for Acinetobacter radioresistens DSM 112286


description: domain/bacteria

description: ASM2622950v1 assembly for Acinetobacter radioresistens DSM 112285


description: domain/bacteria

family: Desulfovibrionaceae

full scientific name: Taurinivorans muris Ye et al. 2023

genus: Taurinivorans

order: Desulfovibrionales

species: Taurinivorans muris

full scientific name: Taurinivorans muris

description: Taurinivorans muris 16S ribosomal RNA gene, partial sequence


class: Clostridia

description: domain/bacteria

family: Peptococcaceae

full scientific name: Acididesulfobacillus acetoxydans Sánchez-Andrea et al. 2023

genus: Acididesulfobacillus

order: Eubacteriales

species: Acididesulfobacillus acetoxydans

full scientific name: Acididesulfobacillus acetoxydans

strain designation: INE

description: Peptococcaceae bacterium strain-l partial 16S rRNA gene, isolate strain-l

description: Peptococcaceae_bacterium_INE_assembly_1 assembly for Acididesulfobacillus acetoxydans INE


description: domain/bacteria

family: Cellulomonadaceae

full scientific name: <I>Cellulomonas</I> Bergey et al. 1923 (Approved Lists 1980)

genus: Cellulomonas

order: Micrococcales

species: Cellulomonas sp.

full scientific name: Cellulomonas sp.

description: ASM104086v1 assembly for Cellulomonas sp. A375-1


description: domain/bacteria

family: Enterococcaceae

full scientific name: <I>Enterococcus</I> (ex Thiercelin and Jouhaud 1903) Schleifer and Kilpper-Bälz 1984

genus: Enterococcus

species: Enterococcus sp.

full scientific name: Enterococcus sp.

strain designation: Ohori


description: domain/bacteria

full scientific name: Klebsiella pneumoniae (Schroeter 1886) Trevisan 1887 (Approved Lists 1980)

genus: Klebsiella

species: Klebsiella pneumoniae

synonym: Hyalococcus pneumoniae


description: domain/bacteria

full scientific name: Klebsiella pneumoniae (Schroeter 1886) Trevisan 1887


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Paraburkholderia solitsugae Wilhelm et al. 2020

genus: Paraburkholderia

species: Paraburkholderia solitsugae

description: Paraburkholderia sp. strain 1N 16S ribosomal RNA gene, partial sequence

description: ASM1317769v1 assembly for Paraburkholderia solitsugae 1N


class: Cytophagia

description: domain/bacteria

family: Spirosomataceae

full scientific name: <I>Spirosoma</I> Migula 1894 (Approved Lists 1980)

genus: Spirosoma

order: Cytophagales

species: Spirosoma sp.

family: Spirosomaceae

full scientific name: Spirosoma sp.


description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: <I>Bifidobacterium</I> Orla-Jensen 1924 (Approved Lists 1980)

genus: Bifidobacterium

order: Bifidobacteriales

species: Bifidobacterium sp.

full scientific name: Bifidobacterium sp.

description: Bifidobacterium sp. H6bp3N 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Bifidobacterium polysaccharolyticum Chen et al. 2022

species: Bifidobacterium polysaccharolyticum

description: Bifidobacterium sp. Hma3N 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Bifidobacterium mellis Olofsson et al. 2023

species: Bifidobacterium mellis

description: Bifidobacterium sp. Bin7N 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Bifidobacterium kimbladii Modesto et al. 2025

species: Bifidobacterium kimbladii

description: Bifidobacterium sp. H1HS10N 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Bifidobacterium sp. H6bp22N 16S ribosomal RNA gene, partial sequence


description: domain/bacteria


culture collection no.: DSM 103656, Marseille-P3242

class: Coriobacteriia

description: domain/bacteria

family: Coriobacteriaceae

full scientific name: Enorma phocaeensis Ndongo et al. 2017

genus: Enorma

order: Coriobacteriales

species: Enorma phocaeensis

description: Enorma phocaeensis partial 16S rRNA gene, type strain Marseille-P3242T

description: PRJEB21314 assembly for Enorma phocaeensis Marseille-P3242


culture collection no.: DSM 103035, Marseille-P2745

description: domain/bacteria

family: Prevotellaceae

full scientific name: Marseilla massiliensis Ricaboni et al. 2016

genus: Marseilla

species: Marseilla massiliensis

description: Prevotella sp. Marseille-P2745 partial 16S rRNA gene, strain Marseille-P2745


description: domain/bacteria

family: Microbacteriaceae

full scientific name: <I>Microbacterium</I> Orla-Jensen 1919 (Approved Lists 1980)

genus: Microbacterium

species: Microbacterium sp.

synonym: Aureobacterium

synonym: Paramicrobacterium

full scientific name: Microbacterium sp.


description: domain/bacteria

description: Microbacterium sp. NCCP-694 gene for 16S ribosomal RNA, partial sequence.


description: domain/bacteria

family: Planctomycetaceae

full scientific name: Gimesia maris (Bauld and Staley 1980 ex Bauld and Staley 1976) Scheuner et al. 2015

genus: Gimesia

order: Planctomycetales

species: Gimesia maris

synonym: Planctomyces maris

full scientific name: Gimesia maris (Bauld and Staley 1980) Scheuner et al. 2015

strain designation: Mal35, Malle 35

assembly level: chromosome

description: ASM774629v1 assembly for Gimesia maris Mal35


description: domain/bacteria

description: ASM774701v1 assembly for Gimesia maris CA11


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas amygdali Psallidas and Panagopoulos 1975 (Approved Lists 1980)

genus: Pseudomonas

species: Pseudomonas amygdali

synonym: Pseudomonas meliae

description: Pseudomonas syringae pv. loropetali strain G13-208 16S ribosomal RNA gene, partial sequence

description: ASM2282834v1 assembly for Pseudomonas amygdali pv. loropetali DSM 105780


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980)

genus: Staphylococcus

order: Caryophanales

species: Staphylococcus aureus

synonym: Staphylococcus aureus subsp. anaerobius

synonym: Staphylococcus roterodami

full scientific name: Staphylococcus aureus Rosenbach 1884

strain designation: BWKH 162


description: domain/bacteria

strain designation: BWKH 155

description: 1254 assembly for Staphylococcus aureus DSM 110897


description: domain/bacteria

description: 2698 assembly for Staphylococcus aureus DSM 110898


description: domain/bacteria

strain designation: BWKH 147


description: domain/bacteria

strain designation: BWKH 169


description: domain/bacteria

strain designation: BWKH 170


description: domain/bacteria

strain designation: BWKH 173


description: domain/bacteria

strain designation: BWKH 176


description: domain/bacteria

strain designation: BWKH 163


description: domain/bacteria

strain designation: BWKH 164


description: domain/bacteria

strain designation: BWKH 165


description: domain/bacteria

strain designation: BWKH 166


description: domain/bacteria

strain designation: BWKH 167


description: domain/bacteria

strain designation: BWKH 168


description: domain/bacteria

strain designation: BWKH 171


description: domain/bacteria

strain designation: BWKH 157


description: domain/bacteria

strain designation: BWKH 158


description: domain/bacteria

strain designation: BWKH 159


description: domain/bacteria

strain designation: BWKH 161


description: domain/bacteria

strain designation: BWKH 152


description: domain/bacteria

strain designation: BWKH 153


description: domain/bacteria

strain designation: BWKH 154


description: domain/bacteria

strain designation: BWKH 156


description: domain/bacteria


description: domain/bacteria

family: Lachnospiraceae

full scientific name: <I>Anaerostipes</I> Schwiertz et al. 2002

genus: Anaerostipes

species: Anaerostipes sp.

full scientific name: Anaerostipes sp.


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: <I>Amycolatopsis</I> Lechevalier et al. 1986

genus: Amycolatopsis

order: Pseudonocardiales

species: Amycolatopsis sp.

synonym: Yuhushiella

full scientific name: Amycolatopsis sp.


description: domain/bacteria

description: ASM1946846v1 assembly for Amycolatopsis sp. DSM 110486


class: Holophagae

description: domain/bacteria

family: Holophagaceae

full scientific name: <I>Geothrix</I> Coates et al. 1999

genus: Geothrix

keyword: phylum/acidobacteriota

order: Holophagales

phylum: Acidobacteriota

species: Geothrix sp.

full scientific name: Geothrix sp.

phylum: Acidobacteria

description: Geothrix sp. strain B23 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Ancalomicrobiaceae

full scientific name: Prosthecodimorpha staleyi Vasilyeva et al. 2025

genus: Prosthecodimorpha

order: Hyphomicrobiales

species: Prosthecodimorpha staleyi

synonym: Prosthecodimorpha staleyi

family: Hyphomicrobiaceae

full scientific name: Prosthecomicrobium sp.

genus: Prosthecomicrobium

phylum: Proteobacteria

species: Prosthecomicrobium sp.

strain designation: Strain 22


description: domain/bacteria

family: Rikenellaceae

full scientific name: Alistipes muris Afrizal et al. 2025

genus: Alistipes

species: Alistipes muris

full scientific name: Alistipes muris

phylum: Bacteroidetes

strain designation: SPFB6_filt_col_31, CLA-AA-M12

description: Alistipes_sp_nov_DSM112343 assembly for Alistipes muris DSM 112343


description: domain/bacteria

family: Paracoccaceae

full scientific name: Neotabrizicola shimadae Muramatsu et al. 2022

genus: Neotabrizicola

order: Rhodobacterales

species: Neotabrizicola shimadae

description: ASM1962390v1 assembly for Neotabrizicola shimadae N10


description: domain/bacteria

family: Oxalobacteraceae

full scientific name: Massilia antarctica Sedlácek et al. 2022

genus: Massilia

order: Burkholderiales

species: Massilia antarctica

synonym: Mokoshia antarctica

full scientific name: Massilia antarctica

description: Massilia sp. strain CCM 8941 16S ribosomal RNA gene, partial sequence.

description: ASM1568933v1 assembly for Massilia antarctica P8398


description: domain/bacteria

full scientific name: Haloechinothrix aidingensis Yang et al. 2021

genus: Haloechinothrix

species: Haloechinothrix aidingensis

phylum: Actinobacteria

description: Haloechinothrix aidingensis strain YIM 98757 16S ribosomal RNA gene, partial sequence

description: ASM1345015v1 assembly for Haloechinothrix aidingensis YIM 98757


description: domain/bacteria

full scientific name: <I>Saccharomonospora</I> Nonomura and Ohara 1971 (Approved Lists 1980)

genus: Saccharomonospora

species: Saccharomonospora sp.

full scientific name: Saccharomonospora sp.

description: Saccharomonospora sp. strain LRS4.154 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium avium subsp. paratuberculosis (Bergey et al. 1923) Thorel et al. 1990

genus: Mycobacterium

order: Mycobacteriales

synonym: Mycobacterium paratuberculosis

description: ASM223200v2 assembly for Mycobacterium avium subsp. paratuberculosis JIII-386


class: Bacilli

description: domain/bacteria

family: Lactobacillaceae

full scientific name: Fructobacillus parabroussonetiae Lin et al. 2022

genus: Fructobacillus

order: Lactobacillales

species: Fructobacillus parabroussonetiae

family: Leuconostocaceae

order: Not assigned to order

phylum: Firmicutes


description: domain/bacteria

family: Muribaculaceae

full scientific name: Muribaculum gordoncarteri Miyake et al. 2020

genus: Muribaculum

order: Bacteroidales

species: Muribaculum gordoncarteri


description: domain/bacteria

family: Clostridiaceae

full scientific name: Clostridium gelidum Honma et al. 2022

genus: Clostridium

species: Clostridium gelidum

full scientific name: Clostridium gelidum

description: Clostridium gelidum gene for 16S ribosomal RNA, partial sequence

description: ASM1997765v1 assembly for Clostridium gelidum C5S11


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Gordoniibacillus kamchatkensis corrig. Kudryashova et al. 2024

genus: Gordoniibacillus

species: Gordoniibacillus kamchatkensis

synonym: Gordonibacillus kamchatkensis

full scientific name: Gordoniibacillus kamchatkensis Kudryashova et al. 2024

description: Paenibacillus sp. strain VKM B-2647 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

full scientific name: <I>Paenibacillus</I> Ash et al. 1994

genus: Paenibacillus

species: Paenibacillus sp.

synonym: Aerobacillus

full scientific name: Paenibacillus sp.

description: Paenibacillus maysiensis 16S ribosomal RNA gene, partial sequence


description: domain/bacteria


description: domain/bacteria

description: ASM127390v1 assembly for Paenibacillus sp. FJAT-27812


description: domain/bacteria

description: Paenibacillus sp. 7022-2 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Paenibacillus sp. 7038-1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Paenibacillus apii strain 7028 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Paenibacillus sp. DY2-1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Paenibacillus sp. C503-4 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Paenibacillus A9 assembly for Paenibacillus sp. A9


description: domain/bacteria

strain designation: Turin10- W06


description: domain/bacteria

family: Planctomycetaceae

full scientific name: Gimesia chilikensis Kumar et al. 2020

genus: Gimesia

phylum: Planctomycetota

species: Gimesia chilikensis

description: ASM774813v1 assembly for Gimesia chilikensis V6


description: domain/bacteria

phylum: Planctomycetes

description: ASM774407v1 assembly for Gimesia chilikensis HG66A1


description: domain/bacteria

description: ASM774653v1 assembly for Gimesia chilikensis MalM14


description: domain/bacteria

family: Micrococcaceae

full scientific name: Kocuria rhizophila Kovács et al. 1999

genus: Kocuria

species: Kocuria rhizophila


class: Sphingobacteriia

description: domain/bacteria

family: Sphingobacteriaceae

full scientific name: <I>Pedobacter</I> Steyn et al. 1998

genus: Pedobacter

order: Sphingobacteriales

species: Pedobacter sp.

synonym: Nubsella

synonym: Paradesertivirga

full scientific name: Pedobacter sp.


description: domain/bacteria

family: Comamonadaceae

full scientific name: Comamonas aquatica subsp. rana Zhao et al. 2019

genus: Comamonas

species: Comamonas aquatica subsp. rana


class: Desulfuromonadia

description: domain/bacteria

family: Geobacteraceae

full scientific name: <I>Geobacter</I> Lovley et al. 1995

genus: Geobacter

order: Geobacterales

phylum: Thermodesulfobacteriota

species: Geobacter sp.

synonym: Trichlorobacter

synonym: Geomobilibacter

class: Deltaproteobacteria

full scientific name: Geobacter sp.

order: Desulfuromonadales

strain designation: Ben

description: Geobacter sp. Ben 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus thoraltensis Devriese et al. 1997

genus: Streptococcus

species: Streptococcus thoraltensis

description: Streptococcus thoraltensis strain DSM 110086 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: <I>Pseudonocardia</I> Henssen 1957 (Approved Lists 1980)

genus: Pseudonocardia

species: Pseudonocardia sp.

synonym: Amycolata

synonym: Pseudoamycolata

synonym: Actinobispora

full scientific name: Pseudonocardia sp.


description: domain/bacteria

description: ASM1946856v1 assembly for Pseudonocardia sp. DSM 110487


description: domain/bacteria

description: ASM1426717v1 assembly for Pseudonocardia sp. C8


description: domain/bacteria

family: Deinococcaceae

full scientific name: <I>Deinococcus</I> Brooks and Murray 1981

genus: Deinococcus

order: Deinococcales

species: Deinococcus sp.

synonym: Deinobacter

full scientific name: Deinococcus sp.

description: Deinococcus sp. JSM 2215060 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria


description: domain/bacteria

family: Gordoniaceae

full scientific name: <I>Gordonia</I> corrig. (ex Tsukamura 1971) Stackebrandt et al. 1989

genus: Gordonia

species: Gordonia sp.

synonym: Gordona

full scientific name: Gordonia sp.


description: domain/bacteria

description: Gordonia sp. strain CFH 90619 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Bacteroidaceae

full scientific name: <I>Phocaeicola</I> Al Masalma et al. 2009

genus: Phocaeicola

phylum: Bacteroidota

species: Phocaeicola sp.

full scientific name: Phocaeicola sp.


description: domain/bacteria

full scientific name: Rhodoferax lithotrophicus Kato et al. 2024

genus: Rhodoferax

species: Rhodoferax lithotrophicus

full scientific name: Rhodoferax lithotrophicus

description: ASM1997361v1 assembly for Rhodoferax lithotrophicus MIZ03

description: Rhodoferax sp. MIZ03

description: Rhodoferax sp. MIZ03

description: Rhodoferax sp. MIZ03


class: Gammaproteobacteria

description: domain/bacteria

family: Leucotrichaceae

full scientific name: Thiothrix litoralis Ravin et al. 2022

genus: Thiothrix

order: Beggiatoales

species: Thiothrix litoralis

family: Thiotrichaceae

full scientific name: Thiothrix litoralis Ravin et al. 2021

strain designation: AS

description: ASM1790113v1 assembly for Thiothrix litoralis AS


culture collection no.: DSM 103610, Marseille-P3306

description: domain/bacteria

full scientific name: <I>Glutamicibacter</I> Busse 2016

genus: Glutamicibacter

order: Micrococcales

species: Glutamicibacter sp.

full scientific name: Glutamicibacter sp.


description: domain/bacteria

full scientific name: Arthrobacter polaris Vodickova et al. 2022

genus: Arthrobacter

species: Arthrobacter polaris

description: ASM2139821v2 assembly for Arthrobacter polaris C1-1


class: Thermococci

description: domain/archaea

family: Thermococcaceae

full scientific name: Thermococcus bergensis Birkeland et al. 2021

genus: Thermococcus

order: Thermococcales

phylum: Methanobacteriota

species: Thermococcus bergensis

full scientific name: Thermococcus bergensis Birkeland et al.

phylum: Euryarchaeota


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Mediterraneibacter agrestimuris Afrizal et al. 2022

genus: Mediterraneibacter

order: Eubacteriales

phylum: Bacillota

species: Mediterraneibacter agrestimuris

full scientific name: Mediterraneibacter agrestimuris

description: Mediterraneibacter_sp_nov_DSM111629 assembly for Mediterraneibacter agrestimuris DSM 111629


class: Negativicutes

description: domain/bacteria

family: Sporomusaceae

full scientific name: Pelorhabdus rhamnosifermentans Gräßle et al. 2022

genus: Pelorhabdus

order: Selenomonadales

species: Pelorhabdus rhamnosifermentans

full scientific name: Pelorhabdus rhamnosifermentans

strain designation: BoRhaA

description: Pelorhabdus rhamnosifermentans strain BoRhaA 16S ribosomal RNA gene, partial sequence

description: ASM1883558v1 assembly for Pelorhabdus rhamnosifermentans BoRhaA


description: domain/bacteria

family: Odoribacteraceae

full scientific name: Odoribacter lunatus Afrizal et al. 2024

genus: Odoribacter

species: Odoribacter lunatus

full scientific name: Odoribacter lunatus

strain designation: WM6_filt_col_13, CLA-AA-M09

description: Odoribacter_sp_nov_DSM112344 assembly for Odoribacter lunatus DSM 112344


class: Alphaproteobacteria

description: domain/bacteria

family: Erythrobacteraceae

full scientific name: Croceicoccus bisphenolivorans Li et al. 2021

genus: Croceicoccus

order: Sphingomonadales

phylum: Pseudomonadota

species: Croceicoccus bisphenolivorans

description: ASM163462v1 assembly for Croceicoccus bisphenolivorans H4


description: domain/bacteria

family: Clostridiaceae

full scientific name: Clostridium gallinarum Pallen 2024

genus: Clostridium

species: Clostridium gallinarum

synonym: Clostridium gallinarum

full scientific name: Clostridium gallinarum

description: ASM1483632v1 assembly for Clostridium gallinarum Sa3CUN1


description: domain/bacteria

family: Lysobacteraceae

full scientific name: Stenotrophomonas rhizophila Wolf et al. 2002

genus: Stenotrophomonas

order: Lysobacterales

species: Stenotrophomonas rhizophila

description: ASM918435v1 assembly for Stenotrophomonas rhizophila IS26


description: domain/bacteria

family: Bacillaceae

full scientific name: Parageobacillus toebii (Sung et al. 2002) Aliyu et al. 2019

genus: Parageobacillus

order: Caryophanales

species: Parageobacillus toebii

synonym: Geobacillus toebii

synonym: Parageobacillus toebii

description: Geobacillus toebii strain E134 16S ribosomal RNA gene, partial sequence


class: Actinomycetes

description: domain/bacteria

family: Actinomycetaceae

full scientific name: Actinomyces provencensis Ndongo et al. 2017

genus: Actinomyces

order: Actinomycetales

species: Actinomyces provencensis


class: Cyanophyceae

family: Nostocaceae

full scientific name: Cyanocohniella rudolphia

genus: Cyanocohniella

phylum: Cyanobacteria

species: Cyanocohniella rudolphia


description: domain/bacteria

family: Paracoccaceae

full scientific name: Pikeienuella piscinae Park et al. 2022

genus: Pikeienuella

order: Rhodobacterales

species: Pikeienuella piscinae

family: Rhodobacteraceae

full scientific name: Pikeienuella piscinae Park et al. 2021

description: Pikeienuella piscinae strain RR4-56 16S ribosomal RNA gene, partial sequence

description: Halovulum sp. strain RR4-56 16S ribosomal RNA gene, partial sequence

description: ASM1104415v1 assembly for Pikeienuella piscinae RR4-56


description: domain/bacteria

family: Bartonellaceae

full scientific name: <I>Mesorhizobium</I> Jarvis et al. 1997

genus: Mesorhizobium

order: Hyphomicrobiales

species: Mesorhizobium sp.

synonym: Allomesorhizobium

synonym: Neomesorhizobium

family: Phyllobacteriaceae

full scientific name: Mesorhizobium sp.


description: domain/bacteria

family: Microbacteriaceae

genus: Microbacterium

species: Microbacterium paraoxydans

class: Actinobacteria

full scientific name: Microbacterium paraoxydans Laffineur et al. 2003 emend. Buczolits et al. 2008

description: Microbacterium paraoxydans strain DH1b 16S ribosomal RNA gene, partial sequence

description: ASM63321v1 assembly for Microbacterium paraoxydans DH1b


culture collection no.: DSM 103390, Marseille-P2770

class: Synergistia

description: domain/bacteria

family: Synergistaceae

full scientific name: Pacaella massiliensis Ndongo et al. 2017

genus: Pacaella

keyword: phylum/synergistota

order: Synergistales

phylum: Synergistota

species: Pacaella massiliensis

phylum: Synergistetes


description: domain/bacteria

full scientific name: Okibacterium fritillariae Evtushenko et al. 2002

genus: Okibacterium

phylum: Actinomycetota

species: Okibacterium fritillariae


description: domain/bacteria

family: Roseobacteraceae

full scientific name: <I>Ruegeria</I> Uchino et al. 1999

genus: Ruegeria

species: Ruegeria sp.

synonym: Silicibacter

synonym: Thalassovita

synonym: Falsiruegeria

full scientific name: Ruegeria sp.

order: Not assigned to order

description: CIP111611 assembly for Ruegeria sp. THAF57


description: domain/bacteria

family: Desulfitobacteriaceae

full scientific name: <I>Desulfosporosinus</I> Stackebrandt et al. 1997

genus: Desulfosporosinus

species: Desulfosporosinus sp.

family: Peptococcaceae

full scientific name: Desulfosporosinus sp.

strain designation: D


description: domain/bacteria

full scientific name: <I>Sulfitobacter</I> Sorokin 1996

genus: Sulfitobacter

species: Sulfitobacter sp.

synonym: Staleya

synonym: Oceanibulbus

full scientific name: Sulfitobacter sp.

description: ASM936355v1 assembly for Sulfitobacter sp. THAF37


description: domain/bacteria

description: ASM333558v1 assembly for Sulfitobacter sp. DFL-14


description: domain/bacteria

description: ASM333559v1 assembly for Sulfitobacter sp. DFL-23


description: domain/bacteria

description: ASM2278873v1 assembly for Sulfitobacter dubius DSM 109990


description: domain/bacteria

description: ASM2278871v1 assembly for Sulfitobacter sp. DSM 110093


description: domain/bacteria

description: ASM2278867v1 assembly for Sulfitobacter pontiacus DSM 110277


description: domain/bacteria

family: Paenibacillaceae

full scientific name: <I>Ammoniphilus</I> Zaitsev et al. 1998

genus: Ammoniphilus

species: Ammoniphilus sp.

full scientific name: Ammoniphilus sp.

description: Ammoniphilus sp. strain CFH 90114 16S ribosomal RNA gene, partial sequence.

description: ASM412319v1 assembly for Ammoniphilus sp. CFH 90114


description: domain/bacteria

family: Micrococcaceae

full scientific name: <I>Kocuria</I> Stackebrandt et al. 1995

genus: Kocuria

species: Kocuria sp.

synonym: Pelczaria

full scientific name: Kocuria sp.

description: Kocuria sp. strain CFH P0795 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria


description: domain/bacteria

full scientific name: <I>Nesterenkonia</I> Stackebrandt et al. 1995

genus: Nesterenkonia

species: Nesterenkonia sp.

full scientific name: Nesterenkonia sp.


description: domain/bacteria

description: Nesterenkonia sp. AN1 16S ribosomal RNA gene, partial sequence

description: NestAN1.1 assembly for Nesterenkonia sp. AN1


class: Betaproteobacteria

description: domain/bacteria

family: Burkholderiaceae

full scientific name: Paraburkholderia madseniana Wilhelm et al. 2020

genus: Paraburkholderia

order: Burkholderiales

species: Paraburkholderia madseniana

description: Burkholderia sp. strain RL16-012-BIC-B 16S ribosomal RNA gene, partial sequence

description: ASM1317771v1 assembly for Paraburkholderia madseniana RL16-012-BIC-B


class: Planctomycetia

description: domain/bacteria

family: Planctomycetaceae

full scientific name: Symmachiella dynata Salbreiter et al. 2021

genus: Symmachiella

order: Planctomycetales

species: Symmachiella dynata

description: ASM774497v1 assembly for Symmachiella dynata Pan258


description: domain/bacteria

family: Staphylococcaceae

genus: Staphylococcus

species: Staphylococcus equorum

full scientific name: Staphylococcus equorum Schleifer et al. 1985 emend. Jeong et al. 2013


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Limosilactobacillus antri (Roos et al. 2005) Zheng et al. 2020

genus: Limosilactobacillus

order: Lactobacillales

species: Limosilactobacillus antri

synonym: Lactobacillus antri

description: Limosilactobacillus antri strain DSM 106038 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Limosilactobacillus antri strain DSM 110087 16S ribosomal RNA gene, partial sequence.


culture collection no.: DSM 103528, Marseille-P3177

class: Clostridia

description: domain/bacteria

family: Lachnospiraceae

full scientific name: Lachnoclostridium phocaeense Brahimi et al. 2017

genus: Lachnoclostridium

species: Lachnoclostridium phocaeense

description: Eubacterium sp. Marseille-P3177 partial 16S rRNA gene, strain Marseille-P3177

description: PRJEB18024 assembly for Lachnoclostridium phocaeense Marseille-P3177


class: Chroococcophyceae

description: domain/bacteria

family: Oculatellaceae

full scientific name: Timaviella dunensis Mikhailyuk and Vynogradova 2022

genus: Timaviella

order: Oculatellales

phylum: Cyanobacteriota

species: Timaviella dunensis

full scientific name: Timaviella dunensis


description: domain/bacteria

family: Bacillaceae

full scientific name: <I>Exiguobacterium</I> Collins et al. 1984

genus: Exiguobacterium

species: Exiguobacterium sp.

full scientific name: Exiguobacterium sp.

strain designation: BJCHI


description: domain/bacteria


class: Flavobacteriia

family: Flavobacteriaceae

full scientific name: Flavobacteriaceae not further classified

genus: Flavobacteriaceae

order: Flavobacteriales

description: ASM173571v1 assembly for Formosa sp. Hel3_A1_48


class: Bacilli

description: domain/bacteria

full scientific name: Limosilactobacillus caecicola Afrizal et al. 2023

species: Limosilactobacillus caecicola

full scientific name: Limosilactobacillus caecicola

description: Limosilactobacillus sp. strain DSM 110982 16S ribosomal RNA gene, partial sequence.

description: Limosilactobacillus_sp_nov1_DSM110982 assembly for Limosilactobacillus caecicola DSM 110982


description: domain/bacteria

full scientific name: <I>Salinicoccus</I> Ventosa et al. 1990

genus: Salinicoccus

species: Salinicoccus sp.

synonym: Lacicoccus

full scientific name: Salinicoccus sp.

description: Salinicoccus roseus gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

family: Cellulomonadaceae

full scientific name: Cellulomonas avistercoris Pallen 2024

genus: Cellulomonas

order: Micrococcales

species: Cellulomonas avistercoris

synonym: Cellulomonas avistercoris

full scientific name: Cellulomonas avistercoris

description: ASM1483644v1 assembly for Cellulomonas avistercoris Sa3CUA2


description: domain/bacteria

full scientific name: Fructobacillus cardui Gallus et al. 2022

genus: Fructobacillus

species: Fructobacillus cardui

family: Leuconostocaceae

description: ASM2321893v1 assembly for Fructobacillus cardui M131


description: domain/bacteria

full scientific name: <I>Anoxybacillus</I> Pikuta et al. 2000

genus: Anoxybacillus

species: Anoxybacillus sp.

full scientific name: Anoxybacillus sp.


description: domain/bacteria

family: Nocardioidaceae

full scientific name: Nocardioides alcanivorans Mitzscherling et al. 2022

genus: Nocardioides

order: Propionibacteriales

species: Nocardioides alcanivorans

strain designation: Nocardioides sp. 2.3 65 (B1), NGK65

description: ASM2155517v1 assembly for Nocardioides alcanivorans NGK65


class: Methanobacteria

description: domain/archaea

family: Methanobacteriaceae

full scientific name: Methanobacterium alkalithermotolerans Mei et al. 2022

genus: Methanobacterium

order: Methanobacteriales

species: Methanobacterium alkalithermotolerans

full scientific name: Methanobacterium alkalithermotolerans

strain designation: CAN

description: Methanobacterium alkalithermotolerans strain CAN 16S ribosomal RNA gene, partial sequence

description: ASM1814118v1 assembly for Methanobacterium alkalithermotolerans CAN


description: domain/bacteria

family: Mycobacteriaceae

genus: Mycobacterium

order: Mycobacteriales

synonym: Mycobacteroides abscessus subsp. abscessus

full scientific name: Mycobacterium abscessus subsp. abscessus (Moore and Frerichs 1953) Leao et al. 2011 emend. Tortoli et al. 2016


description: domain/bacteria

family: Oscillospiraceae

full scientific name: Pusillibacter faecalis (Kitahara et al. 2021) Kitahara et al. 2022

genus: Pusillibacter

order: Eubacteriales

species: Pusillibacter faecalis

synonym: Pusillimonas faecalis

full scientific name: Pusillibacter faecalis

description: Pusillimonas faecalis MM59 gene for 16S rRNA, partial sequence

description: ASM1840870v1 assembly for Pusillibacter faecalis MM59


description: domain/bacteria

full scientific name: <I>Flagellimonas</I> Bae et al. 2007

genus: Flagellimonas

species: Flagellimonas sp.

synonym: Spongiibacterium

synonym: Allomuricauda

synonym: Muricauda

full scientific name: Muricauda sp.

genus: Muricauda

species: Muricauda sp.

description: ASM74518v1 assembly for Allomuricauda sp. MAR_2010_75


description: domain/bacteria

family: Oxalobacteraceae

full scientific name: Janthinobacterium psychrotolerans Gong et al. 2017

genus: Janthinobacterium

species: Janthinobacterium psychrotolerans

phylum: Proteobacteria

description: ASM167788v1 assembly for Janthinobacterium psychrotolerans S3-2