description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Klebsiella pneumoniae subsp. ozaenae (Abel 1893) Ørskov 1984

genus: Klebsiella

species: Klebsiella pneumoniae subsp. ozaenae

synonym: Klebsiella ozaenae

synonym: Bacillus ozaenae


Matching level: species

culture collection no.: CCUG 37236 A

class: Actinomycetes

description: domain/bacteria

domain: Bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium amycolatum Collins et al. 1988

genus: Corynebacterium

keyword: phylum/actinomycetota

order: Mycobacteriales

phylum: Actinomycetota

species: Corynebacterium amycolatum

class: Actinobacteria

phylum: Actinobacteria

type strain: no


class: Betaproteobacteria

description: domain/bacteria

family: Burkholderiaceae

full scientific name: Burkholderia multivorans Vandamme et al. 1997

genus: Burkholderia

keyword: phylum/pseudomonadota

order: Burkholderiales

phylum: Pseudomonadota

species: Burkholderia multivorans

phylum: Proteobacteria


Matching level: strain

description: domain/bacteria

database: nuccore

description: Burkholderia multivorans gene for 16S rRNA, partial sequence.

assembly level: complete

description: ASM1054v1 assembly for Burkholderia multivorans ATCC 17616

description: ASM1850v1 assembly for Burkholderia multivorans ATCC 17616


class: Bacilli

description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980)

genus: Staphylococcus

keyword: phylum/bacillota

order: Caryophanales

phylum: Bacillota

species: Staphylococcus aureus

synonym: Staphylococcus aureus subsp. anaerobius

synonym: Staphylococcus roterodami

phylum: Firmicutes

species: Staphylococcus aureus subsp. anaerobius


description: domain/bacteria

full scientific name: Staphylococcus coagulans (Igimi et al. 1990) Madhaiyan et al. 2020

species: Staphylococcus coagulans

synonym: Staphylococcus schleiferi subsp. coagulans


class: Gammaproteobacteria

description: domain/bacteria

family: Pasteurellaceae

full scientific name: Pasteurella multocida (Lehmann and Neumann 1899) Rosenbusch and Merchant 1939 (Approved Lists 1980)

genus: Pasteurella

order: Pasteurellales

species: Pasteurella multocida

synonym: Micrococcus gallicidus

synonym: Pasteurella gallicida

synonym: Bacterium multocidum


description: domain/bacteria

full scientific name: Corynebacterium jeikeium Jackman et al. 1988

species: Corynebacterium jeikeium


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas putida (Trevisan 1889) Migula 1895 (Approved Lists 1980)

genus: Pseudomonas

order: Pseudomonadales

species: Pseudomonas putida

synonym: Arthrobacter siderocapsulatus

synonym: Bacillus putidus


class: Flavobacteriia

description: domain/bacteria

family: Weeksellaceae

full scientific name: Elizabethkingia meningoseptica (King 1959) Kim et al. 2005

genus: Elizabethkingia

keyword: phylum/bacteroidota

order: Flavobacteriales

phylum: Bacteroidota

species: Elizabethkingia meningoseptica

synonym: Flavobacterium meningosepticum

synonym: Chryseobacterium meningosepticum

family: Flavobacteriaceae

phylum: Bacteroidetes


description: domain/bacteria

family: Propionibacteriaceae

full scientific name: Acidipropionibacterium acidipropionici (Orla-Jensen 1909) Scholz and Kilian 2016

genus: Acidipropionibacterium

order: Propionibacteriales

species: Acidipropionibacterium acidipropionici

synonym: Propionibacterium acidipropionici


description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus faecium (Orla-Jensen 1919) Schleifer and Kilpper-Bälz 1984

genus: Enterococcus

order: Lactobacillales

species: Enterococcus faecium

synonym: Streptococcus faecium


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lactobacillus rhamnosus (Hansen 1968) Collins et al. 1989

genus: Lactobacillus

species: Lactobacillus rhamnosus

synonym: Lacticaseibacillus rhamnosus

synonym: Lactobacillus casei subsp. rhamnosus


description: domain/bacteria

family: Bacillaceae

full scientific name: Bacillus subtilis (Ehrenberg 1835) Cohn 1872 (Approved Lists 1980)

genus: Bacillus

species: Bacillus subtilis

synonym: Vibrio subtilis


description: domain/bacteria

full scientific name: Leuconostoc lactis Garvie 1960 (Approved Lists 1980)

genus: Leuconostoc

species: Leuconostoc lactis

synonym: Leuconostoc argentinum

family: Leuconostocaceae


description: domain/bacteria

family: Brevibacteriaceae

full scientific name: Brevibacterium casei Collins et al. 1983

genus: Brevibacterium

order: Micrococcales

species: Brevibacterium casei


description: domain/bacteria

family: Lysobacteraceae

full scientific name: <I>Pseudoxanthomonas</I> Finkmann et al. 2000

genus: Pseudoxanthomonas

order: Lysobacterales

species: Pseudoxanthomonas sp.


description: domain/bacteria

family: Neisseriaceae

full scientific name: Kingella kingae (Henriksen and Bøvre 1968) Henriksen and Bøvre 1976 (Approved Lists 1980)

genus: Kingella

order: Neisseriales

species: Kingella kingae

synonym: Moraxella kingii


description: domain/bacteria

family: Gemellaceae

full scientific name: Gemella haemolysans (Thjøtta and Bøe 1938) Berger 1960 (Approved Lists 1980)

genus: Gemella

species: Gemella haemolysans

synonym: Neisseria haemolysans

family: Caryophanales, not assigned to family


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus pneumoniae (Klein 1884) Chester 1901 (Approved Lists 1980)

genus: Streptococcus

species: Streptococcus pneumoniae

synonym: Micrococcus pneumoniae

synonym: Staphylococcus pneumoniae


description: domain/bacteria

family: Microbacteriaceae

full scientific name: <I>Microbacterium</I> Orla-Jensen 1919 (Approved Lists 1980)

genus: Microbacterium

species: Microbacterium sp.

synonym: Aureobacterium

synonym: Paramicrobacterium


description: domain/bacteria

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)

species: Pseudomonas aeruginosa

synonym: Pseudomonas paraeruginosa

synonym: Bacterium aeruginosum


description: domain/bacteria

full scientific name: Pasteurella caballi Schlater et al. 1990

species: Pasteurella caballi


culture collection no.: CCUG 37286 A

class: Clostridia

description: domain/bacteria

family: Eubacteriaceae

full scientific name: <I>Eubacterium</I> Prévot 1938 (Approved Lists 1980)

genus: Eubacterium

order: Eubacteriales

species: Eubacterium sp.


culture collection no.: CCUG 37286 B

description: domain/bacteria

full scientific name: Cutibacterium acnes (Gilchrist 1900) Scholz and Kilian 2016

genus: Cutibacterium

species: Cutibacterium acnes

synonym: Propionibacterium acnes

synonym: Bacillus acnes


description: domain/bacteria

full scientific name: Lactobacillus iners Falsen et al. 1999

species: Lactobacillus iners


description: domain/bacteria

full scientific name: Streptococcus anginosus (Andrewes and Horder 1906) Smith and Sherman 1938 (Approved Lists 1980)

species: Streptococcus anginosus

synonym: Streptococcus anginosus


description: domain/bacteria

family: Actinomycetaceae

full scientific name: Schaalia odontolytica (Batty 1958) Nouioui et al. 2018

genus: Schaalia

order: Actinomycetales

species: Schaalia odontolytica

synonym: Actinomyces odontolyticus


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Haemophilus influenzae corrig. (Lehmann and Neumann 1896) Winslow et al. 1917 (Approved Lists 1980)

genus: Haemophilus

species: Haemophilus influenzae

synonym: Hemophilus influenzae

synonym: Bacterium influenzae


description: domain/bacteria

family: Alcaligenaceae

full scientific name: Bordetella parapertussis (Eldering and Kendrick 1938) Moreno-López 1952 (Approved Lists 1980)

genus: Bordetella

species: Bordetella parapertussis

synonym: Bacillus parapertussis


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Capnocytophaga canimorsus Brenner et al. 1990

genus: Capnocytophaga

species: Capnocytophaga canimorsus


description: domain/bacteria

full scientific name: Pasteurella multocida (Lehmann and Neumann 1899) Rosenbusch and Merchant 1939 (Approved Lists 1980)

genus: Pasteurella

species: Pasteurella multocida

synonym: Micrococcus gallicidus

synonym: Pasteurella gallicida

synonym: Bacterium multocidum


description: domain/bacteria

full scientific name: Achromobacter xylosoxidans (ex Yabuuchi and Ohyama 1971) Yabuuchi and Yano 1981

genus: Achromobacter

species: Achromobacter xylosoxidans

synonym: Achromobacter xylosoxidans

synonym: Alcaligenes xylosoxidans

synonym: Alcaligenes denitrificans subsp. xylosoxydans

synonym: Alcaligenes xylosoxydans


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Burkholderia cepacia (Palleroni and Holmes 1981 ex Burkholder 1950) Yabuuchi et al. 1993

genus: Burkholderia

species: Burkholderia cepacia

synonym: Pseudomonas cepacia


description: domain/bacteria

full scientific name: Streptococcus gordonii Kilian et al. 1989

species: Streptococcus gordonii


description: domain/bacteria

family: Vibrionaceae

full scientific name: Vibrio furnissii Brenner et al. 1984

genus: Vibrio

order: Vibrionales

species: Vibrio furnissii


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lactobacillus rhamnosus (Hansen 1968) Collins et al. 1989

genus: Lactobacillus

species: Lactobacillus rhamnosus

synonym: Lacticaseibacillus rhamnosus

synonym: Lactobacillus casei subsp. rhamnosus


description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus faecalis (Andrewes and Horder 1906) Schleifer and Kilpper-Bälz 1984

genus: Enterococcus

species: Enterococcus faecalis

synonym: Streptococcus faecalis


description: domain/bacteria

full scientific name: Streptococcus pneumoniae (Klein 1884) Chester 1901 (Approved Lists 1980)

species: Streptococcus pneumoniae

synonym: Micrococcus pneumoniae

synonym: Staphylococcus pneumoniae


description: domain/bacteria

full scientific name: Streptococcus mitis Andrewes and Horder 1906 (Approved Lists 1980)

species: Streptococcus mitis

synonym: Streptococcus hohhotensis

synonym: Streptococcus humanilactis

synonym: Streptococcus chosunense

synonym: Streptococcus gwangjuense

synonym: Streptococcus toyakuensis

synonym: Streptococcus gwangjuensis

synonym: Streptococcus chosunensis


description: domain/bacteria

full scientific name: Enterococcus gallinarum (Bridge and Sneath 1982) Collins et al. 1984

species: Enterococcus gallinarum

synonym: Streptococcus gallinarum


class: Fusobacteriia

description: domain/bacteria

family: Fusobacteriaceae

full scientific name: Fusobacterium necrophorum (Flügge 1886) Moore and Holdeman 1969 (Approved Lists 1980)

genus: Fusobacterium

keyword: phylum/fusobacteriota

order: Fusobacteriales

phylum: Fusobacteriota

species: Fusobacterium necrophorum

synonym: Fusobacterium necrophorum subsp. funduliforme

synonym: Bacillus necrophorus

phylum: Fusobacteria


description: domain/bacteria

full scientific name: Burkholderia cenocepacia Vandamme et al. 2003

species: Burkholderia cenocepacia


description: domain/bacteria

family: Brevibacteriaceae

full scientific name: Brevibacterium otitidis Pascual et al. 1996

genus: Brevibacterium

species: Brevibacterium otitidis


description: domain/bacteria

full scientific name: Brevibacterium mcbrellneri McBride et al. 1994

species: Brevibacterium mcbrellneri


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium tuberculostearicum Feurer et al. 2004

genus: Corynebacterium

species: Corynebacterium tuberculostearicum

synonym: Corynebacterium tuberculostearicum


description: domain/bacteria

family: Carnobacteriaceae

full scientific name: Granulicatella adiacens corrig. (Bouvet et al. 1989) Collins and Lawson 2000

genus: Granulicatella

species: Granulicatella adiacens

synonym: Streptococcus adiacens

synonym: Abiotrophia adiacens

synonym: Streptococcus adjacens


description: domain/bacteria

full scientific name: Streptococcus canis Devriese et al. 1986

genus: Streptococcus

species: Streptococcus canis


description: domain/bacteria

full scientific name: Trueperella bernardiae (Funke et al. 1995) Yassin et al. 2011

genus: Trueperella

species: Trueperella bernardiae

synonym: Arcanobacterium bernardiae

synonym: Actinomyces bernardiae


class: Alphaproteobacteria

description: domain/bacteria

family: Paracoccaceae

full scientific name: <I>Paracoccus</I> Davis 1969 (Approved Lists 1980)

genus: Paracoccus

order: Rhodobacterales

species: Paracoccus sp.

synonym: Thiosphaera

family: Rhodobacteraceae


culture collection no.: CCUG 37327 A

description: domain/bacteria

family: Christensenellaceae

full scientific name: Catabacter hongkongensis Lau et al. 2014

genus: Catabacter

species: Catabacter hongkongensis

synonym: Catabacter hongkongensis

synonym: Christensenella hongkongensis

family: Catabacteriaceae


description: domain/bacteria

full scientific name: Oligella urethralis (Lautrop et al. 1970) Rossau et al. 1987

genus: Oligella

species: Oligella urethralis

synonym: Moraxella urethralis


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus epidermidis (Winslow and Winslow 1908) Evans 1916 (Approved Lists 1980)

genus: Staphylococcus

species: Staphylococcus epidermidis

synonym: Albococcus epidermidis


description: domain/bacteria

family: Listeriaceae

full scientific name: Listeria monocytogenes (Murray et al. 1926) Pirie 1940 (Approved Lists 1980)

genus: Listeria

species: Listeria monocytogenes

synonym: Bacterium monocytogenes


description: domain/bacteria

family: Bacillaceae

full scientific name: Bacillus cereus Frankland and Frankland 1887 (Approved Lists 1980)

genus: Bacillus

species: Bacillus cereus


description: domain/bacteria

family: Moraxellaceae

full scientific name: Moraxella osloensis Bøvre and Henriksen 1967 (Approved Lists 1980)

genus: Moraxella

species: Moraxella osloensis

synonym: Faucicola osloensis


description: domain/bacteria

full scientific name: <I>Exiguobacterium</I> Collins et al. 1984

genus: Exiguobacterium

species: Exiguobacterium sp.

family: Caryophanales, not assigned to family


description: domain/bacteria

full scientific name: Listeria ivanovii Seeliger et al. 1984

species: Listeria ivanovii


description: domain/bacteria

family: Weeksellaceae

full scientific name: <I>Chryseobacterium</I> Vandamme et al. 1994

genus: Chryseobacterium

species: Chryseobacterium sp.

synonym: Soonwooa

synonym: Halpernia

synonym: Epilithonimonas

synonym: Kaistella

synonym: Planobacterium

synonym: Sejongia

family: Flavobacteriaceae


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Plesiomonas shigelloides corrig. (Bader 1954) Habs and Schubert 1962 (Approved Lists 1980)

genus: Plesiomonas

order: Enterobacterales

species: Plesiomonas shigelloides

synonym: Pseudomonas shigelloides

synonym: Proteus shigelloides

synonym: Pleisomonas shigelloides

family: Enterobacterales, not assigned to family


description: domain/bacteria

full scientific name: Moraxella nonliquefaciens (Scarlett 1916) Lwoff 1939 (Approved Lists 1980)

species: Moraxella nonliquefaciens

description: Moraxella nonliquefaciens strain CCUG 37351 16S-23S ribosomal RNA intergenic spacer, complete sequence.


description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: Gardnerella vaginalis (Gardner and Dukes 1955) Greenwood and Pickett 1980

genus: Gardnerella

order: Bifidobacteriales

species: Gardnerella vaginalis

synonym: Corynebacterium vaginale

synonym: Haemophilus vaginalis


description: domain/bacteria

family: Micrococcaceae

full scientific name: Rothia mucilaginosa (Bergan and Kocur 1982 ex Migula 1900) Collins et al. 2000

genus: Rothia

species: Rothia mucilaginosa

synonym: Stomatococcus mucilaginosus


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium tuberculosis (Zopf 1883) Lehmann and Neumann 1896 (Approved Lists 1980)

genus: Mycobacterium

order: Mycobacteriales

species: Mycobacterium tuberculosis

synonym: Bacterium tuberculosis

synonym: Mycobacterium africanum

synonym: Mycobacterium bovis subsp. caprae

synonym: Mycobacterium pinnipedii

synonym: Mycobacterium tuberculosis subsp. caprae

synonym: Mycobacterium microti

synonym: Mycobacterium caprae

synonym: Mycobacterium bovis

species: Mycobacterium bovis


description: domain/bacteria

full scientific name: Acinetobacter lwoffii (Audureau 1940) Brisou and Prévot 1954 (Approved Lists 1980)

genus: Acinetobacter

species: Acinetobacter lwoffii

synonym: Moraxella lwoffi

synonym: Acinetobacter mesopotamicus


description: domain/bacteria


description: domain/bacteria

family: Methylobacteriaceae

full scientific name: <I>Methylobacterium</I> Patt et al. 1976 (Approved Lists 1980)

genus: Methylobacterium

order: Hyphomicrobiales

species: Methylobacterium sp.


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus gallolyticus Osawa et al. 1996

genus: Streptococcus

species: Streptococcus gallolyticus

synonym: Streptococcus caprinus


description: domain/bacteria

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

species: Escherichia coli

synonym: Bacillus coli


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)

genus: Pseudomonas

species: Pseudomonas aeruginosa

synonym: Pseudomonas paraeruginosa

synonym: Bacterium aeruginosum


description: domain/bacteria

full scientific name: Klebsiella pneumoniae (Schroeter 1886) Trevisan 1887 (Approved Lists 1980)

genus: Klebsiella

species: Klebsiella pneumoniae

synonym: Hyalococcus pneumoniae


description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus faecalis (Andrewes and Horder 1906) Schleifer and Kilpper-Bälz 1984

genus: Enterococcus

species: Enterococcus faecalis

synonym: Streptococcus faecalis


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: <I>Corynebacterium</I> Lehmann and Neumann 1896 (Approved Lists 1980)

genus: Corynebacterium

species: Corynebacterium sp.

synonym: Turicella

synonym: Bacterionema

synonym: Caseobacter


description: domain/bacteria

family: Actinomycetaceae

full scientific name: Schaalia odontolytica (Batty 1958) Nouioui et al. 2018

genus: Schaalia

species: Schaalia odontolytica

synonym: Actinomyces odontolyticus


description: domain/bacteria

family: Carnobacteriaceae

full scientific name: Granulicatella adiacens corrig. (Bouvet et al. 1989) Collins and Lawson 2000

genus: Granulicatella

species: Granulicatella adiacens

synonym: Streptococcus adiacens

synonym: Abiotrophia adiacens

synonym: Streptococcus adjacens


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Aggregatibacter actinomycetemcomitans (Klinger 1912) Nørskov-Lauritsen and Kilian 2006

genus: Aggregatibacter

order: Pasteurellales

species: Aggregatibacter actinomycetemcomitans

synonym: Actinobacillus actinomycetemcomitans

synonym: Bacterium actinomycetemcomitans

synonym: Haemophilus actinomycetemcomitans


description: domain/bacteria

full scientific name: Actinomyces gerencseriae Johnson et al. 1990

genus: Actinomyces

species: Actinomyces gerencseriae


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Latilactobacillus curvatus (Troili-Petersson 1903) Zheng et al. 2020

genus: Latilactobacillus

species: Latilactobacillus curvatus

synonym: Lactobacillus curvatus

synonym: Bacterium curvatum

genus: Lactobacillus

species: Lactobacillus curvatus


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus sciuri Kloos et al. 1976 (Approved Lists 1980)

genus: Staphylococcus

order: Caryophanales

species: Staphylococcus sciuri

synonym: Staphylococcus sciuri subsp. rodentium

synonym: Mammaliicoccus sciuri

synonym: Staphylococcus sciuri subsp. carnaticus


description: domain/bacteria

family: Aerococcaceae

full scientific name: Facklamia languida Lawson et al. 1999

genus: Facklamia

species: Facklamia languida


description: domain/bacteria

family: Bacillaceae

full scientific name: Bacillus licheniformis (Weigmann 1898) Chester 1901 (Approved Lists 1980)

genus: Bacillus

species: Bacillus licheniformis

synonym: Clostridium licheniforme


description: domain/bacteria

family: Paenibacillaceae

full scientific name: <I>Paenibacillus</I> Ash et al. 1994

genus: Paenibacillus

species: Paenibacillus sp.

synonym: Aerobacillus


description: domain/bacteria

family: Moraxellaceae

full scientific name: Moraxella osloensis Bøvre and Henriksen 1967 (Approved Lists 1980)

genus: Moraxella

order: Pseudomonadales

species: Moraxella osloensis

synonym: Faucicola osloensis


culture collection no.: CCUG 37427 A

description: domain/bacteria

full scientific name: Leuconostoc lactis Garvie 1960 (Approved Lists 1980)

genus: Leuconostoc

species: Leuconostoc lactis

synonym: Leuconostoc argentinum

family: Leuconostocaceae


description: domain/bacteria

full scientific name: Streptococcus agalactiae Lehmann and Neumann 1896 (Approved Lists 1980)

genus: Streptococcus

species: Streptococcus agalactiae

synonym: Streptococcus difficile

synonym: Streptococcus difficilis

assembly level: contig

description: ASM28873v1 assembly for Streptococcus agalactiae CCUG 37430


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Burkholderia cepacia (Palleroni and Holmes 1981 ex Burkholder 1950) Yabuuchi et al. 1993

genus: Burkholderia

order: Burkholderiales

species: Burkholderia cepacia

synonym: Pseudomonas cepacia


description: domain/bacteria

full scientific name: Burkholderia cenocepacia Vandamme et al. 2003

species: Burkholderia cenocepacia


description: domain/bacteria

full scientific name: Trueperella bernardiae (Funke et al. 1995) Yassin et al. 2011

genus: Trueperella

species: Trueperella bernardiae

synonym: Arcanobacterium bernardiae

synonym: Actinomyces bernardiae


description: domain/bacteria

full scientific name: Corynebacterium tuberculostearicum Feurer et al. 2004

species: Corynebacterium tuberculostearicum

synonym: Corynebacterium tuberculostearicum


description: domain/bacteria

family: Micrococcaceae

full scientific name: Rothia mucilaginosa (Bergan and Kocur 1982 ex Migula 1900) Collins et al. 2000

genus: Rothia

species: Rothia mucilaginosa

synonym: Stomatococcus mucilaginosus


description: domain/bacteria

family: Listeriaceae

full scientific name: Listeria monocytogenes (Murray et al. 1926) Pirie 1940 (Approved Lists 1980)

genus: Listeria

species: Listeria monocytogenes

synonym: Bacterium monocytogenes


description: domain/bacteria

family: Streptococcaceae

full scientific name: <I>Streptococcus</I> Rosenbach 1884 (Approved Lists 1980)

order: Lactobacillales

species: Streptococcus sp.

synonym: Okadaella


description: domain/bacteria

full scientific name: Lactobacillus iners Falsen et al. 1999

species: Lactobacillus iners


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Klebsiella terrigena Izard et al. 1981

genus: Klebsiella

species: Klebsiella terrigena

synonym: Raoultella terrigena

genus: Raoultella

species: Raoultella terrigena


description: domain/bacteria

full scientific name: Burkholderia vietnamiensis Gillis et al. 1995

species: Burkholderia vietnamiensis


description: domain/bacteria

full scientific name: Corynebacterium diphtheriae (Kruse 1886) Lehmann and Neumann 1896 (Approved Lists 1980)

genus: Corynebacterium

species: Corynebacterium diphtheriae

synonym: Bacillus diphtheriae


description: domain/bacteria

full scientific name: Streptococcus gallolyticus Osawa et al. 1996

species: Streptococcus gallolyticus

synonym: Streptococcus caprinus


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium abscessus (Moore and Frerichs 1953) Kusunoki and Ezaki 1992

genus: Mycobacterium

species: Mycobacterium abscessus

synonym: Mycobacterium chelonae subsp. abscessus

synonym: Mycobacterium abscessus

synonym: Mycobacteroides abscessus

synonym: Mycobacterium chelonei subsp. abscessus


class: Not assigned to order

family: Not assigned to family

genus: Haemophilus

order: Not assigned to order

phylum: Not assigned to order

species: Haemophilus somnus


description: domain/bacteria

family: Aeromonadaceae

full scientific name: Aeromonas sobria Popoff and Véron 1981

genus: Aeromonas

order: Aeromonadales

species: Aeromonas sobria


description: domain/bacteria

full scientific name: Mycobacterium tuberculosis (Zopf 1883) Lehmann and Neumann 1896 (Approved Lists 1980)

species: Mycobacterium tuberculosis

synonym: Mycobacterium africanum

synonym: Mycobacterium bovis subsp. caprae

synonym: Bacterium tuberculosis

synonym: Mycobacterium pinnipedii

synonym: Mycobacterium caprae

synonym: Mycobacterium microti

synonym: Mycobacterium tuberculosis subsp. caprae

synonym: Mycobacterium bovis

species: Mycobacterium bovis

assembly level: scaffold

description: ASM2582266v1 assembly for Mycobacterium tuberculosis variant bovis CCUG 37460


description: domain/bacteria

family: Methylobacteriaceae

full scientific name: <I>Methylobacterium</I> Patt et al. 1976 (Approved Lists 1980)

genus: Methylobacterium

species: Methylobacterium sp.


description: domain/bacteria

full scientific name: Methylobacterium organophilum Patt et al. 1976 (Approved Lists 1980)

species: Methylobacterium organophilum


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Pasteurella multocida (Lehmann and Neumann 1899) Rosenbusch and Merchant 1939 (Approved Lists 1980)

genus: Pasteurella

species: Pasteurella multocida

synonym: Micrococcus gallicidus

synonym: Pasteurella gallicida

synonym: Bacterium multocidum


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Limosilactobacillus reuteri (Kandler et al. 1982) Zheng et al. 2020

genus: Limosilactobacillus

species: Limosilactobacillus reuteri

synonym: Lactobacillus reuteri

genus: Lactobacillus

species: Lactobacillus reuteri


description: domain/bacteria

full scientific name: Aggregatibacter aphrophilus (Khairat 1940) Nørskov-Lauritsen and Kilian 2006

genus: Aggregatibacter

species: Aggregatibacter aphrophilus

synonym: Haemophilus paraphrophilus

synonym: Haemophilus aphrophilus


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus epidermidis (Winslow and Winslow 1908) Evans 1916 (Approved Lists 1980)

genus: Staphylococcus

species: Staphylococcus epidermidis

synonym: Albococcus epidermidis


description: domain/bacteria

full scientific name: Haemophilus influenzae corrig. (Lehmann and Neumann 1896) Winslow et al. 1917 (Approved Lists 1980)

species: Haemophilus influenzae

synonym: Hemophilus influenzae

synonym: Bacterium influenzae


description: domain/bacteria

family: Clostridiaceae

full scientific name: Clostridium perfringens (Veillon and Zuber 1898) Hauduroy et al. 1937 (Approved Lists 1980)

genus: Clostridium

species: Clostridium perfringens

synonym: Clostridioides perfringens

synonym: Bacillus perfringens


culture collection no.: CCUG 37486 C

description: domain/bacteria

family: Actinomycetaceae

full scientific name: Actinomyces israelii corrig. (Kruse 1896) Lachner-Sandoval 1898 (Approved Lists 1980)

genus: Actinomyces

species: Actinomyces israelii

synonym: Streptothrix israelii

synonym: Actinobacterium israelii

synonym: Actinomyces israeli

synonym: Streptothrix israeli

synonym: Actinobacterium israeli


culture collection no.: CCUG 37488 B

class: Bacteroidia

description: domain/bacteria

family: Porphyromonadaceae

full scientific name: <I>Porphyromonas</I> Shah and Collins 1988

genus: Porphyromonas

order: Bacteroidales

species: Porphyromonas sp.

synonym: Oribaculum


description: domain/bacteria

family: Neisseriaceae

full scientific name: <I>Neisseria</I> Trevisan 1885 (Approved Lists 1980)

genus: Neisseria

order: Neisseriales

species: Neisseria sp.


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium cystitidis Yanagawa and Honda 1978 (Approved Lists 1980)

species: Corynebacterium cystitidis


description: domain/bacteria

order: Actinomycetales


description: domain/bacteria

full scientific name: Streptococcus canis Devriese et al. 1986

genus: Streptococcus

species: Streptococcus canis


description: domain/bacteria

family: Alcaligenaceae

full scientific name: Oligella urethralis (Lautrop et al. 1970) Rossau et al. 1987

genus: Oligella

species: Oligella urethralis

synonym: Moraxella urethralis


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Burkholderia vietnamiensis Gillis et al. 1995

genus: Burkholderia

species: Burkholderia vietnamiensis


description: domain/bacteria

full scientific name: Streptococcus anginosus (Andrewes and Horder 1906) Smith and Sherman 1938 (Approved Lists 1980)

species: Streptococcus anginosus

synonym: Streptococcus anginosus


description: domain/bacteria

full scientific name: Lactiplantibacillus plantarum (Orla-Jensen 1919) Zheng et al. 2020

genus: Lactiplantibacillus

species: Lactiplantibacillus plantarum

synonym: Streptobacterium plantarum

synonym: Lactobacillus plantarum

synonym: Lactobacillus arizonensis

species: Lactobacillus plantarum


description: domain/bacteria

full scientific name: Varibaculum cambriense corrig. Hall et al. 2003

genus: Varibaculum

species: Varibaculum cambriense

synonym: Varibaculum cambriensis


description: domain/bacteria

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

species: Escherichia coli

synonym: Bacillus coli


description: domain/bacteria

full scientific name: <I>Weissella</I> Collins et al. 1994

genus: Weissella

species: Weissella sp.

family: Leuconostocaceae


description: domain/bacteria

family: Vibrionaceae

full scientific name: Vibrio cholerae Pacini 1854 (Approved Lists 1980)

genus: Vibrio

order: Vibrionales

species: Vibrio cholerae

synonym: Vibrio albensis


description: domain/bacteria

full scientific name: Neisseria gonorrhoeae (Zopf 1885) Trevisan 1885 (Approved Lists 1980)

species: Neisseria gonorrhoeae

synonym: Merismopedia gonorrhoeae


description: domain/bacteria

full scientific name: Pediococcus pentosaceus Mees 1934 (Approved Lists 1980)

genus: Pediococcus

species: Pediococcus pentosaceus


description: domain/bacteria

full scientific name: Clostridium botulinum (van Ermengem 1896) Bergey et al. 1923 (Approved Lists 1980)

order: Eubacteriales

species: Clostridium botulinum

synonym: Bacillus botulinus


genus: Wautersia

species: Wautersia 'reducta'


description: domain/bacteria

family: Moraxellaceae

full scientific name: Moraxella nonliquefaciens (Scarlett 1916) Lwoff 1939 (Approved Lists 1980)

genus: Moraxella

species: Moraxella nonliquefaciens


description: domain/bacteria

family: Acetobacteraceae

full scientific name: <I>Roseomonas</I> Rihs et al. 1998

genus: Roseomonas

order: Rhodospirillales

species: Roseomonas sp.

synonym: Pseudoroseomonas


description: domain/bacteria

full scientific name: Latilactobacillus curvatus (Troili-Petersson 1903) Zheng et al. 2020

genus: Latilactobacillus

species: Latilactobacillus curvatus

synonym: Lactobacillus curvatus

synonym: Bacterium curvatum

genus: Lactobacillus

species: Lactobacillus curvatus


description: domain/bacteria

full scientific name: Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980)

genus: Staphylococcus

species: Staphylococcus aureus

synonym: Staphylococcus aureus subsp. anaerobius

synonym: Staphylococcus roterodami


description: domain/bacteria

family: Bacillaceae

full scientific name: <I>Bacillus</I> Cohn 1872 (Approved Lists 1980)

genus: Bacillus

species: Bacillus sp.

synonym: Quasibacillus

synonym: Weizmannia

synonym: Maribacillus

synonym: Niallia


description: domain/bacteria

family: Micrococcaceae

full scientific name: Rothia mucilaginosa (Bergan and Kocur 1982 ex Migula 1900) Collins et al. 2000

genus: Rothia

order: Micrococcales

species: Rothia mucilaginosa

synonym: Stomatococcus mucilaginosus


description: domain/bacteria

full scientific name: Neisseria sicca (von Lingelsheim 1908) Bergey et al. 1923 (Approved Lists 1980)

genus: Neisseria

species: Neisseria sicca

synonym: Diplococcus siccus


description: domain/bacteria

family: Streptococcaceae

genus: Streptococcus

species: Streptococcus anginosus

synonym: Streptococcus anginosus


description: domain/bacteria

full scientific name: Clostridium perfringens (Veillon and Zuber 1898) Hauduroy et al. 1937 (Approved Lists 1980)

genus: Clostridium

species: Clostridium perfringens

synonym: Clostridioides perfringens

synonym: Bacillus perfringens


description: domain/bacteria

full scientific name: Staphylococcus saprophyticus (Fairbrother 1940) Shaw et al. 1951 (Approved Lists 1980)

species: Staphylococcus saprophyticus

synonym: Staphylococcus saprophyticus subsp. bovis

synonym: Staphylococcus saprophyticus


description: domain/bacteria

full scientific name: Lactobacillus amylovorus Nakamura 1981

species: Lactobacillus amylovorus

synonym: Lactobacillus sobrius


description: domain/bacteria

full scientific name: Moraxella canis Jannes et al. 1993

species: Moraxella canis


description: domain/bacteria

full scientific name: Bacillus cereus Frankland and Frankland 1887 (Approved Lists 1980)

species: Bacillus cereus


description: domain/bacteria

family: Chromobacteriaceae

full scientific name: Chromobacterium violaceum Bergonzini 1880 (Approved Lists 1980)

genus: Chromobacterium

species: Chromobacterium violaceum

synonym: Chromobacterium pseudoviolaceum


description: domain/bacteria

family: Succinivibrionaceae

full scientific name: Anaerobiospirillum succiniciproducens Davis et al. 1976 (Approved Lists 1980)

genus: Anaerobiospirillum

species: Anaerobiospirillum succiniciproducens


class: Epsilonproteobacteria

description: domain/bacteria

family: Campylobacteraceae

full scientific name: Campylobacter sputorum (Prévot 1940) Véron and Chatelain 1973 (Approved Lists 1980)

genus: Campylobacter

order: Campylobacterales

species: Campylobacter sputorum

synonym: Vibrio sputorum


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium alvei Ausina et al. 1992

genus: Mycobacterium

order: Mycobacteriales

species: Mycobacterium alvei

synonym: Mycolicibacterium alvei

type strain: yes

description: Mycobacterium alvei 16S ribosomal RNA gene, complete sequence

description: Mycobacterium alvei strain CIP 103464 16S ribosomal RNA gene, partial sequence.

description: Mycolicibacterium alvei strain JCM 12272 16S ribosomal RNA gene, partial sequence.

description: ASM1072732v1 assembly for Mycolicibacterium alvei JCM 12272

description: ASM2582236v1 assembly for Mycolicibacterium alvei CCUG 37585

description: ASM3952754v1 assembly for Mycolicibacterium alvei JCM 12272


culture collection no.: CCUG 37589 B

description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus warneri Kloos and Schleifer 1975 (Approved Lists 1980)

species: Staphylococcus warneri


description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus faecium (Orla-Jensen 1919) Schleifer and Kilpper-Bälz 1984

genus: Enterococcus

species: Enterococcus faecium

synonym: Streptococcus faecium


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Klebsiella pneumoniae (Schroeter 1886) Trevisan 1887 (Approved Lists 1980)

genus: Klebsiella

order: Enterobacterales

species: Klebsiella pneumoniae

synonym: Hyalococcus pneumoniae


description: domain/bacteria

family: Neisseriaceae

full scientific name: Neisseria weaveri Holmes et al. 1993

species: Neisseria weaveri

synonym: Neisseria weaveri


description: domain/bacteria

family: Actinomycetaceae

full scientific name: Actinomyces naeslundii corrig. Thompson and Lovestedt 1951 (Approved Lists 1980)

genus: Actinomyces

species: Actinomyces naeslundii

synonym: Actinomyces naeslundi

description: Actinomyces naeslundii strain WE7B1 16S ribosomal RNA gene, partial sequence.

description: Actinomyces naeslundii strain CCUG 37599 16S ribosomal RNA gene, partial sequence.

description: ASM195644v1 assembly for Actinomyces naeslundii CCUG 37599


description: domain/bacteria

full scientific name: Enterococcus casseliflavus (ex Vaughan et al. 1979) Collins et al. 1984

species: Enterococcus casseliflavus

synonym: Streptococcus casseliflavus

synonym: Enterococcus flavescens

synonym: Streptococcus faecium subsp. casseliflavus


description: domain/bacteria

full scientific name: Neisseria meningitidis (Albrecht and Ghon 1901) Murray 1929 (Approved Lists 1980)

species: Neisseria meningitidis

synonym: Micrococcus meningitidis


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Pediococcus pentosaceus Mees 1934 (Approved Lists 1980)

genus: Pediococcus

species: Pediococcus pentosaceus


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Burkholderia cepacia (Palleroni and Holmes 1981 ex Burkholder 1950) Yabuuchi et al. 1993

genus: Burkholderia

species: Burkholderia cepacia

synonym: Pseudomonas cepacia


description: domain/bacteria

full scientific name: Ralstonia mannitolilytica corrig. De Baere et al. 2001

genus: Ralstonia

species: Ralstonia mannitolilytica

synonym: Ralstonia mannitolytica


description: domain/bacteria

family: Aeromonadaceae

full scientific name: Aeromonas caviae (Scherago 1936) Popoff 1984

genus: Aeromonas

species: Aeromonas caviae

synonym: Aeromonas punctata

synonym: Aeromonas hydrophila subsp. anaerogenes

synonym: Aeromonas punctata subsp. caviae

synonym: Bacillus punctatus

synonym: Pseudomonas caviae


family: Not assigned to family

genus: Haemophilus

species: Haemophilus somnus


description: domain/bacteria

full scientific name: Streptococcus anginosus (Andrewes and Horder 1906) Smith and Sherman 1938 (Approved Lists 1980)

species: Streptococcus anginosus

synonym: Streptococcus anginosus


description: domain/bacteria

full scientific name: <I>Bacillus</I> Cohn 1872 (Approved Lists 1980)

genus: Bacillus

species: Bacillus sp.

synonym: Quasibacillus

synonym: Weizmannia

synonym: Maribacillus

synonym: Niallia


description: domain/bacteria

family: Listeriaceae

full scientific name: Listeria monocytogenes (Murray et al. 1926) Pirie 1940 (Approved Lists 1980)

genus: Listeria

species: Listeria monocytogenes

synonym: Bacterium monocytogenes


description: domain/bacteria

full scientific name: Staphylococcus lugdunensis Freney et al. 1988

genus: Staphylococcus

species: Staphylococcus lugdunensis


description: domain/bacteria

full scientific name: Actinomyces denticolens Dent and Williams 1984

species: Actinomyces denticolens


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium ulcerans (ex Gilbert and Stewart 1927) Riegel et al. 1995

genus: Corynebacterium

species: Corynebacterium ulcerans

synonym: Corynebacterium ramonii


description: domain/bacteria

full scientific name: Streptococcus pyogenes Rosenbach 1884 (Approved Lists 1980)

genus: Streptococcus

species: Streptococcus pyogenes


description: domain/bacteria

full scientific name: <I>Corynebacterium</I> Lehmann and Neumann 1896 (Approved Lists 1980)

species: Corynebacterium sp.

synonym: Caseobacter

synonym: Turicella

synonym: Bacterionema


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Aggregatibacter aphrophilus (Khairat 1940) Nørskov-Lauritsen and Kilian 2006

genus: Aggregatibacter

order: Pasteurellales

species: Aggregatibacter aphrophilus

synonym: Haemophilus paraphrophilus

synonym: Haemophilus aphrophilus


description: domain/bacteria

full scientific name: Lactobacillus iners Falsen et al. 1999

genus: Lactobacillus

species: Lactobacillus iners


description: domain/bacteria

family: Caryophanaceae

full scientific name: Kurthia gibsonii Shaw and Keddie 1983

genus: Kurthia

order: Caryophanales

species: Kurthia gibsonii

family: Planococcaceae


description: domain/bacteria

family: Bartonellaceae

full scientific name: Brucella anthropi (Holmes et al. 1988) Hördt et al. 2020

genus: Brucella

order: Hyphomicrobiales

species: Brucella anthropi

synonym: Ochrobactrum anthropi

family: Brucellaceae

genus: Ochrobactrum

species: Ochrobactrum anthropi


description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: Gardnerella vaginalis (Gardner and Dukes 1955) Greenwood and Pickett 1980

genus: Gardnerella

order: Bifidobacteriales

species: Gardnerella vaginalis

synonym: Corynebacterium vaginale

synonym: Haemophilus vaginalis


description: domain/bacteria

full scientific name: Enterococcus casseliflavus (ex Vaughan et al. 1979) Collins et al. 1984

genus: Enterococcus

order: Lactobacillales

species: Enterococcus casseliflavus

synonym: Streptococcus casseliflavus

synonym: Enterococcus flavescens

synonym: Streptococcus faecium subsp. casseliflavus


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: <I>Mycobacterium</I> Lehmann and Neumann 1896 (Approved Lists 1980)

genus: Mycobacterium

species: Mycobacterium sp.

synonym: Mycolicibacillus

synonym: Mycolicibacterium

synonym: Mycobacteroides

synonym: Mycolicibacter


culture collection no.: CCUG 37700 A

description: domain/bacteria

family: Bacillaceae

full scientific name: Bacillus amyloliquefaciens (ex Fukomoto 1943) Priest et al. 1987

species: Bacillus amyloliquefaciens


culture collection no.: CCUG 37700 B

description: domain/bacteria

synonym: Quasibacillus

synonym: Weizmannia

synonym: Maribacillus

synonym: Niallia


description: domain/bacteria

full scientific name: Pediococcus pentosaceus Mees 1934 (Approved Lists 1980)

genus: Pediococcus

species: Pediococcus pentosaceus


description: domain/bacteria

full scientific name: Corynebacterium urealyticum Pitcher et al. 1992

species: Corynebacterium urealyticum


description: domain/bacteria

family: Micrococcaceae

full scientific name: Rothia dentocariosa corrig. (Onishi 1949) Georg and Brown 1967 (Approved Lists 1980)

genus: Rothia

species: Rothia dentocariosa

synonym: Nocardia dentocariosus

synonym: Rothia dentocariosus

synonym: Actinomyces dentocariosus


description: domain/bacteria

full scientific name: Bibersteinia trehalosi (Sneath and Stevens 1990) Blackall et al. 2007

genus: Bibersteinia

species: Bibersteinia trehalosi

synonym: Pasteurella trehalosi


description: domain/bacteria

family: Gemellaceae

full scientific name: Gemella morbillorum (Prévot 1933) Kilpper-Bälz and Schleifer 1988

genus: Gemella

species: Gemella morbillorum

synonym: Peptostreptococcus morbillorum

synonym: Streptococcus morbillorum

synonym: Peptococcus morbillorum

synonym: Diplococcus morbillorum

family: Caryophanales, not assigned to family


description: domain/bacteria

full scientific name: Bacillus subtilis (Ehrenberg 1835) Cohn 1872 (Approved Lists 1980)

genus: Bacillus

species: Bacillus subtilis

synonym: Vibrio subtilis


description: domain/bacteria

full scientific name: Burkholderia vietnamiensis Gillis et al. 1995

genus: Burkholderia

order: Burkholderiales

species: Burkholderia vietnamiensis


description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus columbae Devriese et al. 1993

species: Enterococcus columbae


description: domain/bacteria

family: Dermabacteraceae

full scientific name: Dermabacter hominis corrig. Jones and Collins 1989

genus: Dermabacter

species: Dermabacter hominis

synonym: Dermabacter hominus


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus agalactiae Lehmann and Neumann 1896 (Approved Lists 1980)

species: Streptococcus agalactiae

synonym: Streptococcus difficile

synonym: Streptococcus difficilis

description: ASM31060v1 assembly for Streptococcus agalactiae CCUG 37736


description: domain/bacteria

description: ASM28875v1 assembly for Streptococcus agalactiae CCUG 37737


description: domain/bacteria

description: ASM28877v1 assembly for Streptococcus agalactiae CCUG 37738


description: domain/bacteria

description: ASM31156v1 assembly for Streptococcus agalactiae CCUG 37739


description: domain/bacteria

description: ASM31100v1 assembly for Streptococcus agalactiae CCUG 37740


description: domain/bacteria

description: ASM28879v1 assembly for Streptococcus agalactiae CCUG 37741


description: domain/bacteria

description: ASM28881v1 assembly for Streptococcus agalactiae CCUG 37742


description: domain/bacteria

family: Porphyromonadaceae

full scientific name: <I>Porphyromonas</I> Shah and Collins 1988

genus: Porphyromonas

species: Porphyromonas sp.

synonym: Oribaculum


description: domain/bacteria

family: Bacteroidaceae

full scientific name: Bacteroides fragilis (Veillon and Zuber 1898) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Bacteroides

species: Bacteroides fragilis

synonym: Bacteroides hominis

synonym: Bacillus fragilis


description: domain/bacteria

family: Microbacteriaceae

full scientific name: Leifsonia aquatica (ex Leifson 1962) Evtushenko et al. 2000

genus: Leifsonia

species: Leifsonia aquatica

synonym: Leifsonia aquatica

synonym: Corynebacterium aquaticum


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lacticaseibacillus paracasei (Collins et al. 1989) Zheng et al. 2020

genus: Lacticaseibacillus

species: Lacticaseibacillus paracasei

synonym: Lactobacillus paracasei

genus: Lactobacillus

species: Lactobacillus paracasei


description: domain/bacteria

family: Aerococcaceae

full scientific name: Aerococcus urinae Aguirre and Collins 1992

genus: Aerococcus

species: Aerococcus urinae


description: domain/bacteria

family: Peptostreptococcaceae

full scientific name: Clostridioides difficile (Hall and O'Toole 1935) Lawson et al. 2016

genus: Clostridioides

order: Peptostreptococcales

species: Clostridioides difficile

synonym: Peptoclostridium difficile

synonym: Bacillus difficilis

synonym: Clostridium difficile


description: domain/bacteria

description: Clostridium difficile 16S rRNA gene (partial), internal transcriber spacer 1 (ITS1) and 23S rRNA (partial)


description: domain/bacteria

description: ASM1906708v1 assembly for Clostridioides difficile CCUG37785


description: domain/bacteria

synonym: Nocardia dentocariosus

synonym: Rothia dentocariosus

synonym: Actinomyces dentocariosus


description: domain/bacteria

family: Morganellaceae

full scientific name: Proteus vulgaris Hauser 1885 (Approved Lists 1980)

genus: Proteus

species: Proteus vulgaris


description: domain/bacteria

full scientific name: Streptococcus gallolyticus subsp. pasteurianus (Poyart et al. 2002) Schlegel et al. 2003

genus: Streptococcus

synonym: Streptococcus pasteurianus


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Haemophilus influenzae corrig. (Lehmann and Neumann 1896) Winslow et al. 1917 (Approved Lists 1980)

genus: Haemophilus

species: Haemophilus influenzae

synonym: Hemophilus influenzae

synonym: Bacterium influenzae


description: domain/bacteria

full scientific name: Latilactobacillus curvatus (Troili-Petersson 1903) Zheng et al. 2020

genus: Latilactobacillus

species: Latilactobacillus curvatus

synonym: Lactobacillus curvatus

synonym: Bacterium curvatum

species: Lactobacillus curvatus


description: domain/bacteria

full scientific name: Actinobacillus capsulatus Arseculeratne 1962 (Approved Lists 1980)

genus: Actinobacillus

species: Actinobacillus capsulatus

description: Actinobacillus capsulatus strain CCUG 37798 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

species: Bacillus subtilis

synonym: Vibrio subtilis


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Capnocytophaga canimorsus Brenner et al. 1990

genus: Capnocytophaga

order: Flavobacteriales

species: Capnocytophaga canimorsus


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: <I>Corynebacterium</I> Lehmann and Neumann 1896 (Approved Lists 1980)

genus: Corynebacterium

species: Corynebacterium sp.

synonym: Turicella

synonym: Bacterionema

synonym: Caseobacter


description: domain/bacteria

full scientific name: Lactobacillus acidophilus (Moro 1900) Hansen and Mocquot 1970 (Approved Lists 1980)

species: Lactobacillus acidophilus

synonym: Bacillus acidophilus


description: domain/bacteria

full scientific name: Corynebacterium accolens Neubauer et al. 1991

species: Corynebacterium accolens


description: domain/bacteria

full scientific name: Streptococcus lutetiensis Poyart et al. 2002

species: Streptococcus lutetiensis


description: domain/bacteria

family: Actinomycetaceae

full scientific name: Actinomyces denticolens Dent and Williams 1984

genus: Actinomyces

species: Actinomyces denticolens


culture collection no.: CCUG 37815 A

description: domain/bacteria

family: Bacillaceae

full scientific name: Bacillus subtilis (Ehrenberg 1835) Cohn 1872 (Approved Lists 1980)

genus: Bacillus


culture collection no.: CCUG 37815 B

description: domain/bacteria


description: domain/bacteria

family: Yersiniaceae

full scientific name: Yersinia enterocolitica (Schleifstein and Coleman 1939) Frederiksen 1964 (Approved Lists 1980)

genus: Yersinia

species: Yersinia enterocolitica

synonym: Bacterium enterocoliticum


description: domain/bacteria

family: Gemellaceae

full scientific name: Gemella bergeri corrig. Collins et al. 1998

genus: Gemella

species: Gemella bergeri

synonym: Gemella bergeriae

family: Caryophanales, not assigned to family


description: domain/bacteria

full scientific name: Gemella sanguinis Collins et al. 1999

species: Gemella sanguinis


description: domain/bacteria

full scientific name: <I>Bacillus</I> Cohn 1872 (Approved Lists 1980)

species: Bacillus sp.

synonym: Quasibacillus

synonym: Weizmannia

synonym: Maribacillus

synonym: Niallia


description: domain/bacteria

full scientific name: Muribacter muris (Bisgaard 1988) Nicklas et al. 2015

genus: Muribacter

species: Muribacter muris

synonym: Actinobacillus muris


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium chelonae corrig. Bergey et al. 1923 (Approved Lists 1980)

genus: Mycobacterium

species: Mycobacterium chelonae

synonym: Mycobacterium chelonei

synonym: Mycobacteroides chelonae


description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus hirae Farrow and Collins 1985

genus: Enterococcus

species: Enterococcus hirae


description: domain/bacteria

full scientific name: Corynebacterium minutissimum (ex Sarkany et al. 1962) Collins and Jones 1983

species: Corynebacterium minutissimum


description: domain/bacteria

full scientific name: Aggregatibacter aphrophilus (Khairat 1940) Nørskov-Lauritsen and Kilian 2006

genus: Aggregatibacter

species: Aggregatibacter aphrophilus

synonym: Haemophilus paraphrophilus

synonym: Haemophilus aphrophilus


description: domain/bacteria

full scientific name: Enterococcus faecium (Orla-Jensen 1919) Schleifer and Kilpper-Bälz 1984

species: Enterococcus faecium

synonym: Streptococcus faecium


description: domain/bacteria

family: Gordoniaceae

full scientific name: Gordonia terrae corrig. (Tsukamura 1971) Stackebrandt et al. 1989

genus: Gordonia

species: Gordonia terrae

synonym: Gordona terrae

synonym: Rhodococcus terrae


description: domain/bacteria

full scientific name: Ignavigranum ruoffiae Collins et al. 1999

genus: Ignavigranum

species: Ignavigranum ruoffiae


description: domain/bacteria

family: Nocardiaceae

full scientific name: Nocardia farcinica Trevisan 1889 (Approved Lists 1980)

genus: Nocardia

species: Nocardia farcinica


class: Erysipelotrichia

description: domain/bacteria

family: Erysipelotrichaceae

full scientific name: Erysipelothrix rhusiopathiae (Migula 1900) Buchanan 1918 (Approved Lists 1980)

genus: Erysipelothrix

order: Erysipelotrichales

species: Erysipelothrix rhusiopathiae

synonym: Bacterium rhusiopathiae


description: domain/bacteria

full scientific name: Actinomyces oris Henssge et al. 2009

order: Actinomycetales

species: Actinomyces oris


description: domain/bacteria

full scientific name: Enterococcus durans (ex Sherman and Wing 1937) Collins et al. 1984

species: Enterococcus durans

synonym: Streptococcus durans


description: domain/bacteria

full scientific name: Enterococcus malodoratus (ex Pette 1955) Collins et al. 1984

species: Enterococcus malodoratus


description: domain/bacteria

full scientific name: Enterococcus mundtii Collins et al. 1986

species: Enterococcus mundtii


description: domain/bacteria

full scientific name: Enterococcus devriesei Švec et al. 2005

species: Enterococcus devriesei


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus hyovaginalis Devriese et al. 1997

genus: Streptococcus

species: Streptococcus hyovaginalis


description: domain/bacteria

full scientific name: Streptococcus thoraltensis Devriese et al. 1997

species: Streptococcus thoraltensis


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Enterocloster clostridioformis (Burri and Ankersmit 1906) Haas and Blanchard 2020

genus: Enterocloster

species: Enterocloster clostridioformis

synonym: Clostridium clostridioforme

synonym: Bacteroides clostridiiformis

synonym: Bacterium clostridiiforme

synonym: Clostridium clostridiiforme

family: Clostridiaceae

genus: Clostridium

species: Clostridium clostridioforme


description: domain/bacteria

family: Micrococcaceae

full scientific name: Rothia mucilaginosa (Bergan and Kocur 1982 ex Migula 1900) Collins et al. 2000

genus: Rothia

species: Rothia mucilaginosa

synonym: Stomatococcus mucilaginosus


description: domain/bacteria

full scientific name: Actinobaculum suis (Wegienek and Reddy 1982 ex Soltys and Spratling 1957) Lawson et al. 1997

genus: Actinobaculum

species: Actinobaculum suis

synonym: Eubacterium suis

synonym: Actinomyces suis


description: domain/bacteria

full scientific name: Yersinia enterocolitica (Schleifstein and Coleman 1939) Frederiksen 1964 (Approved Lists 1980)

species: Yersinia enterocolitica

synonym: Bacterium enterocoliticum


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987

genus: Salmonella

species: Salmonella enterica

synonym: Salmonella choleraesuis

synonym: Bacillus typhimurium

synonym: Salmonella enteritidis

synonym: Salmonella paratyphi

synonym: Salmonella typhi

synonym: Bacillus enteritidis

synonym: Bacillus typhi

synonym: Bacillus choleraesuis

synonym: Salmonella typhimurium


description: domain/bacteria


description: domain/bacteria

full scientific name: Shigella dysenteriae (Shiga 1897) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Shigella

species: Shigella dysenteriae

synonym: Bacillus dysentericus

synonym: Escherichia coli subsp. shigellae


description: domain/bacteria

full scientific name: Shigella flexneri Castellani and Chalmers 1919 (Approved Lists 1980)

species: Shigella flexneri


description: domain/bacteria

full scientific name: Shigella boydii Ewing 1949 (Approved Lists 1980)

species: Shigella boydii


description: domain/bacteria

full scientific name: Shigella sonnei (Levine 1920) Weldin 1927 (Approved Lists 1980)

species: Shigella sonnei

synonym: Bacterium sonnei


description: domain/bacteria

full scientific name: Yersinia pseudotuberculosis (Pfeiffer 1889) Smith and Thal 1965 (Approved Lists 1980)

genus: Yersinia

species: Yersinia pseudotuberculosis

synonym: Bacillus pseudotuberkulosis

synonym: Pasteurella lymphangitidis


description: domain/bacteria

full scientific name: Streptococcus lutetiensis Poyart et al. 2002

species: Streptococcus lutetiensis


description: domain/bacteria

full scientific name: Streptococcus gordonii Kilian et al. 1989

species: Streptococcus gordonii


description: domain/bacteria

full scientific name: <I>Mycobacterium</I> Lehmann and Neumann 1896 (Approved Lists 1980)

species: Mycobacterium sp.

synonym: Mycolicibacillus

synonym: Mycolicibacterium

synonym: Mycobacteroides

synonym: Mycolicibacter


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Pediococcus parvulus Günther and White 1961 (Approved Lists 1980)

genus: Pediococcus

species: Pediococcus parvulus


description: domain/bacteria

full scientific name: Lactiplantibacillus plantarum (Orla-Jensen 1919) Zheng et al. 2020

genus: Lactiplantibacillus

species: Lactiplantibacillus plantarum

synonym: Streptobacterium plantarum

synonym: Lactobacillus plantarum

synonym: Lactobacillus arizonensis

genus: Lactobacillus

species: Lactobacillus plantarum


description: domain/bacteria

full scientific name: Schaalia odontolytica (Batty 1958) Nouioui et al. 2018

genus: Schaalia

species: Schaalia odontolytica

synonym: Actinomyces odontolyticus


description: domain/bacteria

family: Tannerellaceae

full scientific name: <I>Parabacteroides</I> Sakamoto and Benno 2006

genus: Parabacteroides

order: Bacteroidales

species: Parabacteroides sp.


description: domain/bacteria

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

species: Escherichia coli

synonym: Bacillus coli


description: domain/bacteria

family: Campylobacteraceae

full scientific name: Campylobacter jejuni (Jones et al. 1931) Véron and Chatelain 1973 (Approved Lists 1980)

genus: Campylobacter

species: Campylobacter jejuni

synonym: Vibrio jejuni


description: domain/bacteria

family: Peptostreptococcaceae

full scientific name: Clostridioides difficile (Hall and O'Toole 1935) Lawson et al. 2016

genus: Clostridioides

species: Clostridioides difficile

synonym: Peptoclostridium difficile

synonym: Bacillus difficilis

synonym: Clostridium difficile

order: Eubacteriales


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus sciuri Kloos et al. 1976 (Approved Lists 1980)

genus: Staphylococcus

species: Staphylococcus sciuri

synonym: Staphylococcus sciuri subsp. rodentium

synonym: Mammaliicoccus sciuri

synonym: Staphylococcus sciuri subsp. carnaticus


description: domain/bacteria

full scientific name: Enterococcus faecium (Orla-Jensen 1919) Schleifer and Kilpper-Bälz 1984

genus: Enterococcus

species: Enterococcus faecium

synonym: Streptococcus faecium


description: domain/bacteria

full scientific name: Kocuria varians (Migula 1900) Stackebrandt et al. 1995

genus: Kocuria

species: Kocuria varians

synonym: Micrococcus varians


description: domain/bacteria

full scientific name: Lactobacillus rhamnosus (Hansen 1968) Collins et al. 1989

species: Lactobacillus rhamnosus

synonym: Lacticaseibacillus rhamnosus

synonym: Lactobacillus casei subsp. rhamnosus


description: domain/bacteria

full scientific name: Staphylococcus saprophyticus (Fairbrother 1940) Shaw et al. 1951 (Approved Lists 1980)

species: Staphylococcus saprophyticus

synonym: Staphylococcus saprophyticus subsp. bovis

synonym: Staphylococcus saprophyticus


description: domain/bacteria

full scientific name: Leuconostoc lactis Garvie 1960 (Approved Lists 1980)

genus: Leuconostoc

species: Leuconostoc lactis

synonym: Leuconostoc argentinum

family: Leuconostocaceae


description: domain/bacteria

full scientific name: Weissella confusa (Holzapfel and Kandler 1969) Collins et al. 1994

genus: Weissella

species: Weissella confusa

synonym: Lactobacillus coprophilus subsp. confusus

synonym: Lactobacillus confusus

description: ASM476608v1 assembly for Weissella confusa CCUG 37938

description: ASM1646608v1 assembly for Weissella confusa CCUG 37938


culture collection no.: CCUG 37939 A

description: domain/bacteria

full scientific name: Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980)

species: Staphylococcus aureus

synonym: Staphylococcus aureus subsp. anaerobius

synonym: Staphylococcus roterodami


culture collection no.: CCUG 37939 C

description: domain/bacteria


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Haemophilus influenzae corrig. (Lehmann and Neumann 1896) Winslow et al. 1917 (Approved Lists 1980)

genus: Haemophilus

species: Haemophilus influenzae

synonym: Hemophilus influenzae

synonym: Bacterium influenzae


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: <I>Corynebacterium</I> Lehmann and Neumann 1896 (Approved Lists 1980)

genus: Corynebacterium

species: Corynebacterium sp.

synonym: Turicella

synonym: Bacterionema

synonym: Caseobacter


description: domain/bacteria

family: Morganellaceae

full scientific name: Proteus penneri Hickman et al. 1983

genus: Proteus

species: Proteus penneri


description: domain/bacteria

family: Weeksellaceae

full scientific name: Elizabethkingia meningoseptica (King 1959) Kim et al. 2005

genus: Elizabethkingia

species: Elizabethkingia meningoseptica

synonym: Flavobacterium meningosepticum

synonym: Chryseobacterium meningosepticum

family: Flavobacteriaceae


family: Not assigned to family

order: Not assigned to order

species: Lactobacillus casei-complex


description: domain/bacteria

full scientific name: Corynebacterium tuberculostearicum Feurer et al. 2004

species: Corynebacterium tuberculostearicum

synonym: Corynebacterium tuberculostearicum


description: domain/bacteria

family: Hafniaceae

full scientific name: Hafnia alvei Møller 1954 (Approved Lists 1980)

genus: Hafnia

species: Hafnia alvei


description: domain/bacteria

full scientific name: Actinobacillus capsulatus Arseculeratne 1962 (Approved Lists 1980)

genus: Actinobacillus

species: Actinobacillus capsulatus

description: Actinobacillus capsulatus strain CCUG 37956 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium abscessus (Moore and Frerichs 1953) Kusunoki and Ezaki 1992

genus: Mycobacterium

species: Mycobacterium abscessus

synonym: Mycobacterium chelonae subsp. abscessus

synonym: Mycobacterium abscessus

synonym: Mycobacteroides abscessus

synonym: Mycobacterium chelonei subsp. abscessus


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus salivarius Andrewes and Horder 1906 (Approved Lists 1980)

genus: Streptococcus

species: Streptococcus salivarius


Matching level: subspecies

description: domain/bacteria

full scientific name: Klebsiella pneumoniae subsp. ozaenae (Abel 1893) Ørskov 1984

genus: Klebsiella

species: Klebsiella pneumoniae subsp. ozaenae

synonym: Klebsiella ozaenae

synonym: Bacillus ozaenae


description: domain/bacteria

family: Gemellaceae

full scientific name: Gemella bergeri corrig. Collins et al. 1998

genus: Gemella

species: Gemella bergeri

synonym: Gemella bergeriae

family: Caryophanales, not assigned to family


description: domain/bacteria

full scientific name: Gemella sanguinis Collins et al. 1999

species: Gemella sanguinis


description: domain/bacteria

full scientific name: Gemella morbillorum (Prévot 1933) Kilpper-Bälz and Schleifer 1988

species: Gemella morbillorum

synonym: Peptostreptococcus morbillorum

synonym: Streptococcus morbillorum

synonym: Peptococcus morbillorum

synonym: Diplococcus morbillorum


description: domain/bacteria

family: Clostridiaceae

full scientific name: Clostridium tertium (Henry 1917) Bergey et al. 1923 (Approved Lists 1980)

genus: Clostridium

species: Clostridium tertium

synonym: Bacillus tertius


culture collection no.: CCUG 37978 B

description: domain/bacteria

family: Lactobacillaceae

full scientific name: <I>Lactobacillus</I> Beijerinck 1901 (Approved Lists 1980)

genus: Lactobacillus

species: Lactobacillus sp.


description: domain/bacteria

full scientific name: Clostridium perfringens (Veillon and Zuber 1898) Hauduroy et al. 1937 (Approved Lists 1980)

species: Clostridium perfringens

synonym: Clostridioides perfringens

synonym: Bacillus perfringens


description: domain/bacteria

full scientific name: Peptostreptococcus anaerobius (Natvig 1905) Kluyver and van Niel 1936 (Approved Lists 1980)

genus: Peptostreptococcus

species: Peptostreptococcus anaerobius

synonym: Streptococcus anaerobius


description: domain/bacteria

family: Fusobacteriaceae

full scientific name: Fusobacterium nucleatum subsp. polymorphum (ex Knorr 1922) Dzink et al. 1990

genus: Fusobacterium

order: Fusobacteriales

synonym: Fusobacterium polymorphum


description: domain/bacteria

family: Erysipelotrichaceae

full scientific name: Erysipelothrix rhusiopathiae (Migula 1900) Buchanan 1918 (Approved Lists 1980)

genus: Erysipelothrix

species: Erysipelothrix rhusiopathiae

synonym: Bacterium rhusiopathiae


description: domain/bacteria

family: Bacillaceae

full scientific name: <I>Bacillus</I> Cohn 1872 (Approved Lists 1980)

genus: Bacillus

species: Bacillus sp.

synonym: Quasibacillus

synonym: Weizmannia

synonym: Maribacillus

synonym: Niallia


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980)

genus: Staphylococcus

species: Staphylococcus aureus

synonym: Staphylococcus aureus subsp. anaerobius

synonym: Staphylococcus roterodami


description: domain/bacteria

full scientific name: Staphylococcus hominis Kloos and Schleifer 1975 (Approved Lists 1980)

species: Staphylococcus hominis


description: domain/bacteria

full scientific name: Corynebacterium afermentans subsp. lipophilum Riegel et al. 1993


description: domain/bacteria

full scientific name: Ligilactobacillus salivarius (Rogosa et al. 1953) Zheng et al. 2020

genus: Ligilactobacillus

species: Ligilactobacillus salivarius

synonym: Lactobacillus salivarius

synonym: Lactobacillus salivarius subsp. salicinius

species: Lactobacillus salivarius


description: domain/bacteria

full scientific name: Streptococcus equinus Andrewes and Horder 1906 (Approved Lists 1980)

species: Streptococcus equinus

synonym: Streptococcus bovis


description: domain/bacteria

full scientific name: Corynebacterium pseudodiphtheriticum Lehmann and Neumann 1896 (Approved Lists 1980)

genus: Corynebacterium

species: Corynebacterium pseudodiphtheriticum


description: domain/bacteria

family: Campylobacteraceae

full scientific name: Campylobacter ureolyticus (Jackson and Goodman 1978) Vandamme et al. 2010

genus: Campylobacter

order: Campylobacterales

species: Campylobacter ureolyticus

synonym: Bacteroides ureolyticus


description: domain/bacteria

full scientific name: Limosilactobacillus reuteri (Kandler et al. 1982) Zheng et al. 2020

genus: Limosilactobacillus

species: Limosilactobacillus reuteri

synonym: Lactobacillus reuteri

species: Lactobacillus reuteri


description: domain/bacteria

full scientific name: Lactobacillus gasseri Lauer and Kandler 1980

species: Lactobacillus gasseri


description: domain/bacteria

family: Helicobacteraceae

full scientific name: <I>Helicobacter</I> Goodwin et al. 1989

genus: Helicobacter

species: Helicobacter sp.

synonym: Pseudohelicobacter


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Enterobacter asburiae Brenner et al. 1988

genus: Enterobacter

species: Enterobacter asburiae

synonym: Enterobacter muelleri


description: domain/bacteria

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

species: Escherichia coli

synonym: Bacillus coli


description: domain/bacteria

full scientific name: Lactobacillus rhamnosus (Hansen 1968) Collins et al. 1989

species: Lactobacillus rhamnosus

synonym: Lacticaseibacillus rhamnosus

synonym: Lactobacillus casei subsp. rhamnosus


description: domain/bacteria

full scientific name: Bacillus amyloliquefaciens (ex Fukomoto 1943) Priest et al. 1987

species: Bacillus amyloliquefaciens


description: domain/bacteria

full scientific name: Staphylococcus saprophyticus (Fairbrother 1940) Shaw et al. 1951 (Approved Lists 1980)

species: Staphylococcus saprophyticus

synonym: Staphylococcus saprophyticus subsp. bovis

synonym: Staphylococcus saprophyticus


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Haemophilus influenzae corrig. (Lehmann and Neumann 1896) Winslow et al. 1917 (Approved Lists 1980)

genus: Haemophilus

species: Haemophilus influenzae

synonym: Hemophilus influenzae

synonym: Bacterium influenzae


description: domain/bacteria

family: Sphingomonadaceae

full scientific name: Sphingomonas paucimobilis (Holmes et al. 1977) Yabuuchi et al. 1990

genus: Sphingomonas

order: Sphingomonadales

species: Sphingomonas paucimobilis

synonym: Pseudomonas paucimobilis


description: domain/bacteria

family: Methylobacteriaceae

full scientific name: <I>Methylobacterium</I> Patt et al. 1976 (Approved Lists 1980)

genus: Methylobacterium

species: Methylobacterium sp.


description: domain/bacteria

family: Morganellaceae

full scientific name: Morganella morganii (Winslow et al. 1919) Fulton 1943 (Approved Lists 1980)

genus: Morganella

order: Enterobacterales

species: Morganella morganii

synonym: Proteus morganii

synonym: Bacillus morgani


description: domain/bacteria

full scientific name: Staphylococcus haemolyticus Schleifer and Kloos 1975 (Approved Lists 1980)

species: Staphylococcus haemolyticus


description: domain/bacteria

full scientific name: Lacticaseibacillus paracasei (Collins et al. 1989) Zheng et al. 2020

genus: Lacticaseibacillus

species: Lacticaseibacillus paracasei

synonym: Lactobacillus paracasei

genus: Lactobacillus

species: Lactobacillus paracasei


description: domain/bacteria

family: Neisseriaceae

full scientific name: Kingella kingae (Henriksen and Bøvre 1968) Henriksen and Bøvre 1976 (Approved Lists 1980)

genus: Kingella

order: Neisseriales

species: Kingella kingae

synonym: Moraxella kingii


description: domain/bacteria

full scientific name: Bacillus licheniformis (Weigmann 1898) Chester 1901 (Approved Lists 1980)

order: Caryophanales

species: Bacillus licheniformis

synonym: Clostridium licheniforme


description: domain/bacteria

full scientific name: Bacillus subtilis (Ehrenberg 1835) Cohn 1872 (Approved Lists 1980)

species: Bacillus subtilis

synonym: Vibrio subtilis


description: domain/bacteria

full scientific name: Weissella cibaria Björkroth et al. 2002

genus: Weissella

species: Weissella cibaria

synonym: Weissella kimchii

family: Leuconostocaceae


description: domain/bacteria

family: Moraxellaceae

full scientific name: Moraxella nonliquefaciens (Scarlett 1916) Lwoff 1939 (Approved Lists 1980)

genus: Moraxella

order: Pseudomonadales

species: Moraxella nonliquefaciens


description: domain/bacteria

full scientific name: Aggregatibacter aphrophilus (Khairat 1940) Nørskov-Lauritsen and Kilian 2006

genus: Aggregatibacter

order: Pasteurellales

species: Aggregatibacter aphrophilus

synonym: Haemophilus paraphrophilus

synonym: Haemophilus aphrophilus


description: domain/bacteria

family: Zoogloeaceae

full scientific name: <I>Azoarcus</I> Reinhold-Hurek et al. 1993

genus: Azoarcus

order: Rhodocyclales

species: Azoarcus sp.


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium abscessus (Moore and Frerichs 1953) Kusunoki and Ezaki 1992

genus: Mycobacterium

order: Mycobacteriales

species: Mycobacterium abscessus

synonym: Mycobacterium chelonae subsp. abscessus

synonym: Mycobacterium abscessus

synonym: Mycobacteroides abscessus

synonym: Mycobacterium chelonei subsp. abscessus


description: domain/bacteria

full scientific name: Acinetobacter pittii Nemec et al. 2011

genus: Acinetobacter

species: Acinetobacter pittii


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus anginosus (Andrewes and Horder 1906) Smith and Sherman 1938 (Approved Lists 1980)

genus: Streptococcus

order: Lactobacillales

species: Streptococcus anginosus

synonym: Streptococcus anginosus


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Paenibacillus amylolyticus (Nakamura 1984 ex Choukévitch 1911) Ash et al. 1994

genus: Paenibacillus

species: Paenibacillus amylolyticus

synonym: Bacillus amylolyticus


description: domain/bacteria

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

species: Escherichia coli

synonym: Bacillus coli


family: Not assigned to family

genus: Wautersia

species: Wautersia 'reducta'


description: domain/bacteria

full scientific name: Campylobacter jejuni (Jones et al. 1931) Véron and Chatelain 1973 (Approved Lists 1980)

genus: Campylobacter

species: Campylobacter jejuni

synonym: Vibrio jejuni


description: domain/bacteria

full scientific name: Klebsiella aerogenes (Hormaeche and Edwards 1960) Tindall et al. 2017

genus: Klebsiella

species: Klebsiella aerogenes

synonym: Klebsiella mobilis

synonym: Enterobacter aerogenes


description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus faecium (Orla-Jensen 1919) Schleifer and Kilpper-Bälz 1984

genus: Enterococcus

species: Enterococcus faecium

synonym: Streptococcus faecium


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Capnocytophaga canimorsus Brenner et al. 1990

genus: Capnocytophaga

order: Flavobacteriales

species: Capnocytophaga canimorsus


description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: Gardnerella vaginalis (Gardner and Dukes 1955) Greenwood and Pickett 1980

genus: Gardnerella

order: Bifidobacteriales

species: Gardnerella vaginalis

synonym: Corynebacterium vaginale

synonym: Haemophilus vaginalis


description: domain/bacteria

family: Bacillaceae

full scientific name: <I>Bacillus</I> Cohn 1872 (Approved Lists 1980)

genus: Bacillus

species: Bacillus sp.

synonym: Quasibacillus

synonym: Weizmannia

synonym: Maribacillus

synonym: Niallia


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Burkholderia cenocepacia Vandamme et al. 2003

genus: Burkholderia

order: Burkholderiales

species: Burkholderia cenocepacia


description: domain/bacteria

family: Actinomycetaceae

full scientific name: Arcanobacterium haemolyticum (ex MacLean et al. 1946) Collins et al. 1983

genus: Arcanobacterium

order: Actinomycetales

species: Arcanobacterium haemolyticum


description: domain/bacteria

family: Micrococcaceae

full scientific name: Rothia dentocariosa corrig. (Onishi 1949) Georg and Brown 1967 (Approved Lists 1980)

genus: Rothia

order: Micrococcales

species: Rothia dentocariosa

synonym: Nocardia dentocariosus

synonym: Rothia dentocariosus

synonym: Actinomyces dentocariosus


description: domain/bacteria

full scientific name: Moraxella nonliquefaciens (Scarlett 1916) Lwoff 1939 (Approved Lists 1980)

genus: Moraxella

species: Moraxella nonliquefaciens


description: domain/bacteria

family: Sphingomonadaceae

full scientific name: Sphingomonas paucimobilis (Holmes et al. 1977) Yabuuchi et al. 1990

genus: Sphingomonas

species: Sphingomonas paucimobilis

synonym: Pseudomonas paucimobilis


description: domain/bacteria

full scientific name: <I>Sphingomonas</I> Yabuuchi et al. 1990

species: Sphingomonas sp.

synonym: Novistakelama

synonym: Parastakelama

synonym: Alteristakelama

synonym: Pseudostakelama

synonym: Parayabuuchia

synonym: Humisphingomonas

synonym: Pseudosphingomonas

synonym: Neorhizorhabdus

synonym: Alterisphingomonas

synonym: Solisphingomonas

synonym: Parasphingomonas

synonym: Flavisphingomonas

synonym: Alteriyabuuchia

synonym: Edaphosphingomonas

synonym: Alterisphingopyxis

synonym: Alterirhizorhabdus

synonym: Paraquisediminimonas

synonym: Pararhizorhabdus


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Enterobacter cloacae (Jordan 1890) Hormaeche and Edwards 1960 (Approved Lists 1980)

genus: Enterobacter

species: Enterobacter cloacae

synonym: Bacillus cloacae

synonym: Bacterium cloacae

synonym: Cloaca cloacae


description: domain/bacteria

full scientific name: Aneurinibacillus thermoaerophilus (Meier-Stauffer et al. 1996) Heyndrickx et al. 1997

genus: Aneurinibacillus

species: Aneurinibacillus thermoaerophilus

synonym: Bacillus thermoaerophilus


description: domain/bacteria

family: Aerococcaceae

full scientific name: Abiotrophia defectiva (Bouvet et al. 1989) Kawamura et al. 1995

genus: Abiotrophia

species: Abiotrophia defectiva

synonym: Streptococcus defectivus


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Haemophilus influenzae corrig. (Lehmann and Neumann 1896) Winslow et al. 1917 (Approved Lists 1980)

genus: Haemophilus

species: Haemophilus influenzae

synonym: Hemophilus influenzae

synonym: Bacterium influenzae


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lacticaseibacillus paracasei (Collins et al. 1989) Zheng et al. 2020

genus: Lacticaseibacillus

species: Lacticaseibacillus paracasei

synonym: Lactobacillus paracasei

genus: Lactobacillus

species: Lactobacillus paracasei


description: domain/bacteria

family: Weeksellaceae

full scientific name: Bergeyella zoohelcum (Holmes et al. 1987) Vandamme et al. 1994

genus: Bergeyella

species: Bergeyella zoohelcum

synonym: Weeksella zoohelcum


description: domain/bacteria

family: Clostridiaceae

full scientific name: Clostridium cadaveris (Klein 1899) McClung and McCoy 1957 (Approved Lists 1980)

genus: Clostridium

order: Eubacteriales

species: Clostridium cadaveris

synonym: Bacillus cadaveris


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium tuberculosis (Zopf 1883) Lehmann and Neumann 1896 (Approved Lists 1980)

genus: Mycobacterium

species: Mycobacterium tuberculosis

synonym: Mycobacterium africanum

synonym: Mycobacterium bovis subsp. caprae

synonym: Bacterium tuberculosis

synonym: Mycobacterium pinnipedii

synonym: Mycobacterium caprae

synonym: Mycobacterium microti

synonym: Mycobacterium tuberculosis subsp. caprae

synonym: Mycobacterium bovis

species: Mycobacterium africanum

description: Mycobacterium africanum 16S ribosomal RNA gene, partial sequence.

description: Mycobacterium africanum strain CIP 105147 16S ribosomal RNA gene, partial sequence.

description: ASM298233v1 assembly for Mycobacterium tuberculosis variant africanum ATCC 25420


description: domain/bacteria

family: Comamonadaceae

full scientific name: <I>Curvibacter</I> Ding and Yokota 2004

genus: Curvibacter

species: Curvibacter sp.


description: domain/bacteria

full scientific name: Pediococcus pentosaceus Mees 1934 (Approved Lists 1980)

genus: Pediococcus

species: Pediococcus pentosaceus


description: domain/bacteria

full scientific name: Leuconostoc lactis Garvie 1960 (Approved Lists 1980)

genus: Leuconostoc

species: Leuconostoc lactis

synonym: Leuconostoc argentinum

family: Leuconostocaceae


description: domain/bacteria

family: Leptotrichiaceae

full scientific name: Leptotrichia buccalis (Robin 1853) Trevisan 1879 (Approved Lists 1980)

genus: Leptotrichia

order: Fusobacteriales

species: Leptotrichia buccalis

synonym: Leptothrix buccalis


description: domain/bacteria

family: Neisseriaceae

full scientific name: <I>Neisseria</I> Trevisan 1885 (Approved Lists 1980)

genus: Neisseria

species: Neisseria sp.


description: domain/bacteria

family: Pseudoalteromonadaceae

full scientific name: <I>Pseudoalteromonas</I> Gauthier et al. 1995

genus: Pseudoalteromonas

order: Alteromonadales

species: Pseudoalteromonas sp.


description: domain/bacteria

family: Fusobacteriaceae

full scientific name: <I>Fusobacterium</I> Knorr 1922 (Approved Lists 1980)

genus: Fusobacterium

species: Fusobacterium sp.

synonym: Zandiella


description: domain/bacteria

family: Bacillaceae

full scientific name: <I>Bacillus</I> Cohn 1872 (Approved Lists 1980)

genus: Bacillus

species: Bacillus sp.

synonym: Quasibacillus

synonym: Weizmannia

synonym: Maribacillus

synonym: Niallia


description: domain/bacteria

full scientific name: Kingella kingae (Henriksen and Bøvre 1968) Henriksen and Bøvre 1976 (Approved Lists 1980)

genus: Kingella

species: Kingella kingae

synonym: Moraxella kingii


description: domain/bacteria

family: Helicobacteraceae

full scientific name: Helicobacter cholecystus Franklin et al. 1997

genus: Helicobacter

order: Campylobacterales

species: Helicobacter cholecystus


description: domain/bacteria

family: Alcaligenaceae

full scientific name: Bordetella pertussis (Bergey et al. 1923) Moreno-López 1952 (Approved Lists 1980)

genus: Bordetella

species: Bordetella pertussis

synonym: Hemophilus pertussis

description: ASM399109v1 assembly for Bordetella pertussis C927


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus anginosus (Andrewes and Horder 1906) Smith and Sherman 1938 (Approved Lists 1980)

genus: Streptococcus

species: Streptococcus anginosus

synonym: Streptococcus anginosus


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium riegelii Funke et al. 1998

genus: Corynebacterium

species: Corynebacterium riegelii


description: domain/bacteria

full scientific name: Corynebacterium bovis Bergey et al. 1923 (Approved Lists 1980)

species: Corynebacterium bovis


culture collection no.: CCUG 38188 B

description: domain/bacteria

full scientific name: Delftia acidovorans (den Dooren de Jong 1926) Wen et al. 1999

genus: Delftia

species: Delftia acidovorans

synonym: Comamonas acidovorans

synonym: Pseudomonas acidovorans


description: domain/bacteria

family: Actinomycetaceae

full scientific name: Actinotignum schaalii (Lawson et al. 1997) Yassin et al. 2015

genus: Actinotignum

species: Actinotignum schaalii

synonym: Actinobaculum schaalii


description: domain/bacteria

family: Nocardiaceae

full scientific name: Rhodococcus hoagii (Morse 1912) Kämpfer et al. 2014

genus: Rhodococcus

species: Rhodococcus hoagii

synonym: Corynebacterium hoagii

synonym: Bacillus hoagii


description: domain/bacteria

full scientific name: Schaalia odontolytica (Batty 1958) Nouioui et al. 2018

genus: Schaalia

species: Schaalia odontolytica

synonym: Actinomyces odontolyticus


description: domain/bacteria

family: Propionibacteriaceae

full scientific name: Cutibacterium acnes (Gilchrist 1900) Scholz and Kilian 2016

genus: Cutibacterium

order: Propionibacteriales

species: Cutibacterium acnes

synonym: Propionibacterium acnes

synonym: Bacillus acnes


description: domain/bacteria

full scientific name: Corynebacterium phocae Pascual et al. 1998

species: Corynebacterium phocae


description: domain/bacteria

full scientific name: Streptococcus infantarius Schlegel et al. 2000

species: Streptococcus infantarius

synonym: Streptococcus infantarius


description: domain/bacteria

family: Vibrionaceae

full scientific name: Vibrio parahaemolyticus (Fujino et al. 1951) Sakazaki et al. 1963 (Approved Lists 1980)

genus: Vibrio

order: Vibrionales

species: Vibrio parahaemolyticus

synonym: Beneckea parahaemolytica

synonym: Pasteurella parahaemolytica


description: domain/bacteria

full scientific name: <I>Streptococcus</I> Rosenbach 1884 (Approved Lists 1980)

species: Streptococcus sp.

synonym: Okadaella


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

order: Enterobacterales

species: Escherichia coli

synonym: Bacillus coli


description: domain/bacteria

family: Sphingomonadaceae

full scientific name: <I>Sphingomonas</I> Yabuuchi et al. 1990

genus: Sphingomonas

order: Sphingomonadales

species: Sphingomonas sp.

synonym: Alterirhizorhabdus

synonym: Paraquisediminimonas

synonym: Novistakelama

synonym: Parastakelama

synonym: Alteristakelama

synonym: Pseudostakelama

synonym: Alterisphingomonas

synonym: Solisphingomonas

synonym: Parayabuuchia

synonym: Humisphingomonas

synonym: Pseudosphingomonas

synonym: Neorhizorhabdus

synonym: Parasphingomonas

synonym: Flavisphingomonas

synonym: Edaphosphingomonas

synonym: Pararhizorhabdus

synonym: Alteriyabuuchia

synonym: Alterisphingopyxis


description: domain/bacteria

family: Moraxellaceae

full scientific name: Moraxella bovoculi Angelos et al. 2007

genus: Moraxella

order: Pseudomonadales

species: Moraxella bovoculi


description: domain/bacteria

full scientific name: Moraxella bovis (Hauduroy et al. 1937) Murray 1948 (Approved Lists 1980)

species: Moraxella bovis

synonym: Haemophilus bovis

description: Moraxella bovis strain CCUG 38236 16S-23S ribosomal RNA intergenic spacer, complete sequence.


description: domain/bacteria

full scientific name: Corynebacterium falsenii Sjödén et al. 1998

species: Corynebacterium falsenii


description: domain/bacteria

full scientific name: Vibrio cholerae Pacini 1854 (Approved Lists 1980)

species: Vibrio cholerae

synonym: Vibrio albensis


description: domain/bacteria

full scientific name: Neisseria sicca (von Lingelsheim 1908) Bergey et al. 1923 (Approved Lists 1980)

genus: Neisseria

order: Neisseriales

species: Neisseria sicca

synonym: Diplococcus siccus


description: domain/bacteria

full scientific name: <I>Corynebacterium</I> Lehmann and Neumann 1896 (Approved Lists 1980)

order: Mycobacteriales

species: Corynebacterium sp.

synonym: Turicella

synonym: Bacterionema

synonym: Caseobacter


description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: Gardnerella vaginalis (Gardner and Dukes 1955) Greenwood and Pickett 1980

genus: Gardnerella

species: Gardnerella vaginalis

synonym: Corynebacterium vaginale

synonym: Haemophilus vaginalis


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980)

genus: Staphylococcus

order: Caryophanales

species: Staphylococcus aureus

synonym: Staphylococcus aureus subsp. anaerobius

synonym: Staphylococcus roterodami


description: domain/bacteria

full scientific name: Corynebacterium confusum Funke et al. 1998

species: Corynebacterium confusum


description: domain/bacteria

full scientific name: Streptococcus anginosus (Andrewes and Horder 1906) Smith and Sherman 1938 (Approved Lists 1980)

order: Lactobacillales

species: Streptococcus anginosus

synonym: Streptococcus anginosus


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Enterocloster clostridioformis (Burri and Ankersmit 1906) Haas and Blanchard 2020

genus: Enterocloster

species: Enterocloster clostridioformis

synonym: Clostridium clostridioforme

synonym: Bacteroides clostridiiformis

synonym: Bacterium clostridiiforme

synonym: Clostridium clostridiiforme

family: Clostridiaceae

genus: Clostridium

species: Clostridium clostridioforme


description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus faecalis (Andrewes and Horder 1906) Schleifer and Kilpper-Bälz 1984

genus: Enterococcus

species: Enterococcus faecalis

synonym: Streptococcus faecalis


class: Negativicutes

description: domain/bacteria

family: Veillonellaceae

full scientific name: Veillonella parvula (Veillon and Zuber 1898) Prévot 1933 (Approved Lists 1980)

genus: Veillonella

order: Veillonellales

species: Veillonella parvula

synonym: Staphylococcus parvulus

synonym: Veillonella alcalescens


description: domain/bacteria

full scientific name: Clostridium septicum (Macé 1889) Ford 1927 (Approved Lists 1980)

species: Clostridium septicum

synonym: Bacillus septicus


description: domain/bacteria

full scientific name: <I>Staphylococcus</I> Rosenbach 1884 (Approved Lists 1980)

species: Staphylococcus sp.

synonym: Mammaliicoccus


description: domain/bacteria

full scientific name: Streptococcus dysgalactiae subsp. equisimilis Vandamme et al. 1996

genus: Streptococcus


description: domain/bacteria

family: Fusobacteriaceae

full scientific name: <I>Fusobacterium</I> Knorr 1922 (Approved Lists 1980)

genus: Fusobacterium

species: Fusobacterium sp.

synonym: Zandiella


description: domain/bacteria

full scientific name: Lactococcus garvieae (Collins et al. 1984) Schleifer et al. 1986

genus: Lactococcus

species: Lactococcus garvieae

synonym: Enterococcus seriolicida

synonym: Lactobacillus garvieae

synonym: Streptococcus garvieae


description: domain/bacteria

full scientific name: Plesiomonas shigelloides corrig. (Bader 1954) Habs and Schubert 1962 (Approved Lists 1980)

genus: Plesiomonas

species: Plesiomonas shigelloides

synonym: Pseudomonas shigelloides

synonym: Proteus shigelloides

synonym: Pleisomonas shigelloides

family: Enterobacterales, not assigned to family


description: domain/bacteria

full scientific name: <I>Bifidobacterium</I> Orla-Jensen 1924 (Approved Lists 1980)

genus: Bifidobacterium

order: Bifidobacteriales

species: Bifidobacterium sp.


description: domain/bacteria

full scientific name: Vibrio alginolyticus (Miyamoto et al. 1961) Sakazaki 1968 (Approved Lists 1980)

species: Vibrio alginolyticus

synonym: Beneckea alginolytica

synonym: Oceanomonas alginolytica


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus pneumoniae (Klein 1884) Chester 1901 (Approved Lists 1980)

species: Streptococcus pneumoniae

synonym: Micrococcus pneumoniae

synonym: Staphylococcus pneumoniae


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Burkholderia cepacia (Palleroni and Holmes 1981 ex Burkholder 1950) Yabuuchi et al. 1993

genus: Burkholderia

order: Burkholderiales

species: Burkholderia cepacia

synonym: Pseudomonas cepacia


description: domain/bacteria

family: Carnobacteriaceae

full scientific name: Granulicatella adiacens corrig. (Bouvet et al. 1989) Collins and Lawson 2000

genus: Granulicatella

species: Granulicatella adiacens

synonym: Streptococcus adiacens

synonym: Abiotrophia adiacens

synonym: Streptococcus adjacens


description: domain/bacteria

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

species: Escherichia coli

synonym: Bacillus coli


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lactobacillus jensenii Gasser et al. 1970 (Approved Lists 1980)

genus: Lactobacillus

species: Lactobacillus jensenii


culture collection no.: CCUG 38292 A

description: domain/bacteria

full scientific name: Limosilactobacillus fermentum (Beijerinck 1901) Zheng et al. 2020

genus: Limosilactobacillus

species: Limosilactobacillus fermentum

synonym: Lactobacillus fermentum

synonym: Lactobacillus cellobiosus

species: Lactobacillus fermentum


culture collection no.: CCUG 38292 B

family: Not assigned to family

order: Not assigned to order

species: Lactobacillus casei-complex


description: domain/bacteria

family: Propionibacteriaceae

full scientific name: Cutibacterium acnes (Gilchrist 1900) Scholz and Kilian 2016

genus: Cutibacterium

species: Cutibacterium acnes

synonym: Propionibacterium acnes

synonym: Bacillus acnes


description: domain/bacteria

family: Vibrionaceae

full scientific name: Vibrio vulnificus (Reichelt et al. 1979) Farmer 1980

genus: Vibrio

species: Vibrio vulnificus

synonym: Beneckea vulnifica


description: domain/bacteria

full scientific name: Lactobacillus rhamnosus (Hansen 1968) Collins et al. 1989

species: Lactobacillus rhamnosus

synonym: Lacticaseibacillus rhamnosus

synonym: Lactobacillus casei subsp. rhamnosus


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Capnocytophaga canimorsus Brenner et al. 1990

genus: Capnocytophaga

order: Flavobacteriales

species: Capnocytophaga canimorsus


description: domain/bacteria

family: Neisseriaceae

full scientific name: Neisseria meningitidis (Albrecht and Ghon 1901) Murray 1929 (Approved Lists 1980)

genus: Neisseria

species: Neisseria meningitidis

synonym: Micrococcus meningitidis


description: domain/bacteria


description: domain/bacteria

full scientific name: Lactobacillus gasseri Lauer and Kandler 1980

species: Lactobacillus gasseri


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium bovis Bergey et al. 1923 (Approved Lists 1980)

genus: Corynebacterium

species: Corynebacterium bovis


description: domain/bacteria

full scientific name: Corynebacterium striatum (Chester 1901) Eberson 1918 (Approved Lists 1980)

species: Corynebacterium striatum

synonym: Bacterium striatum


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus felis Igimi et al. 1989

genus: Staphylococcus

species: Staphylococcus felis


description: domain/bacteria

family: Leptotrichiaceae

full scientific name: Sneathia sanguinegens Collins et al. 2002

genus: Sneathia

order: Fusobacteriales

species: Sneathia sanguinegens


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium farcinogenes Chamoiseau 1973 (Approved Lists 1980)

genus: Mycobacterium

species: Mycobacterium farcinogenes

synonym: Mycolicibacterium farcinogenes


description: domain/bacteria

full scientific name: Mycobacterium senegalense (Chamoiseau 1973) Chamoiseau 1979 (Approved Lists 1980)

species: Mycobacterium senegalense

synonym: Mycolicibacterium senegalense

synonym: Mycobacterium farcinogenes subsp. senegalense


description: domain/bacteria

full scientific name: <I>Mycobacterium</I> Lehmann and Neumann 1896 (Approved Lists 1980)

species: Mycobacterium sp.

synonym: Mycolicibacillus

synonym: Mycolicibacterium

synonym: Mycobacteroides

synonym: Mycolicibacter


description: domain/bacteria

family: Aeromonadaceae

full scientific name: Aeromonas hydrophila (Chester 1901) Stanier 1943 (Approved Lists 1980)

genus: Aeromonas

order: Aeromonadales

species: Aeromonas hydrophila

synonym: Pseudomonas hydrophila

synonym: Bacillus hydrophilus


culture collection no.: CCUG 38343 A

description: domain/bacteria

family: Lysobacteraceae

full scientific name: Stenotrophomonas maltophilia (Hugh 1981 ex Hugh and Ryschenkow 1961) Palleroni and Bradbury 1993

genus: Stenotrophomonas

order: Lysobacterales

species: Stenotrophomonas maltophilia

synonym: Stenotrophomonas africana

synonym: Xanthomonas maltophilia

synonym: Pseudomonas maltophilia


culture collection no.: CCUG 38343 B

description: domain/bacteria

full scientific name: <I>Leptotrichia</I> Trevisan 1879 (Approved Lists 1980)

genus: Leptotrichia

species: Leptotrichia sp.


description: domain/bacteria

full scientific name: Staphylococcus haemolyticus Schleifer and Kloos 1975 (Approved Lists 1980)

species: Staphylococcus haemolyticus


description: domain/bacteria

full scientific name: Staphylococcus saprophyticus (Fairbrother 1940) Shaw et al. 1951 (Approved Lists 1980)

species: Staphylococcus saprophyticus

synonym: Staphylococcus saprophyticus subsp. bovis

synonym: Staphylococcus saprophyticus


description: domain/bacteria

full scientific name: Neisseria elongata Bøvre and Holten 1970 (Approved Lists 1980)

species: Neisseria elongata


description: domain/bacteria

family: Micrococcaceae

full scientific name: Micrococcus luteus (Schroeter 1872) Cohn 1872 (Approved Lists 1980)

genus: Micrococcus

order: Micrococcales

species: Micrococcus luteus

synonym: Micrococcus yunnanensis

synonym: Bacteridium luteum

synonym: Micrococcus aloeverae


culture collection no.: CCUG 38353 A

description: domain/bacteria

full scientific name: Capnocytophaga canimorsus Brenner et al. 1990

species: Capnocytophaga canimorsus


culture collection no.: CCUG 38353 B

description: domain/bacteria


description: domain/bacteria

description: ASM1327626v1 assembly for Capnocytophaga canis CCUG 38354


culture collection no.: CCUG 38355 A

description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

species: Escherichia coli

synonym: Bacillus coli


description: domain/bacteria

full scientific name: <I>Corynebacterium</I> Lehmann and Neumann 1896 (Approved Lists 1980)

species: Corynebacterium sp.

synonym: Turicella

synonym: Bacterionema

synonym: Caseobacter


description: domain/bacteria

full scientific name: Staphylococcus sciuri Kloos et al. 1976 (Approved Lists 1980)

species: Staphylococcus sciuri

synonym: Staphylococcus sciuri subsp. rodentium

synonym: Mammaliicoccus sciuri

synonym: Staphylococcus sciuri subsp. carnaticus


description: domain/bacteria

full scientific name: Macrococcus carouselicus Kloos et al. 1998

genus: Macrococcus

species: Macrococcus carouselicus


description: domain/bacteria

full scientific name: Macrococcus equipercicus Kloos et al. 1998

species: Macrococcus equipercicus


description: domain/bacteria

full scientific name: Macrococcus bovicus Kloos et al. 1998

species: Macrococcus bovicus


description: domain/bacteria

full scientific name: Staphylococcus kloosii Schleifer et al. 1985

species: Staphylococcus kloosii


description: domain/bacteria

full scientific name: Staphylococcus caprae Devriese et al. 1983

species: Staphylococcus caprae


description: domain/bacteria

family: Peptostreptococcaceae

full scientific name: Peptostreptococcus anaerobius (Natvig 1905) Kluyver and van Niel 1936 (Approved Lists 1980)

genus: Peptostreptococcus

order: Peptostreptococcales

species: Peptostreptococcus anaerobius

synonym: Streptococcus anaerobius

order: Eubacteriales


culture collection no.: CCUG 38380 A

description: domain/bacteria

full scientific name: Lactobacillus jensenii Gasser et al. 1970 (Approved Lists 1980)

species: Lactobacillus jensenii


description: domain/bacteria

full scientific name: Lactobacillus rhamnosus (Hansen 1968) Collins et al. 1989

species: Lactobacillus rhamnosus

synonym: Lacticaseibacillus rhamnosus

synonym: Lactobacillus casei subsp. rhamnosus


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus agalactiae Lehmann and Neumann 1896 (Approved Lists 1980)

genus: Streptococcus

species: Streptococcus agalactiae

synonym: Streptococcus difficile

synonym: Streptococcus difficilis

description: ASM28883v1 assembly for Streptococcus agalactiae CCUG 38383