description: domain/bacteria

description: ASM3040887v1 assembly for Corynebacterium gottingense DSM 108986


Matching level: species

class: Actinomycetes

description: domain/bacteria

domain: Bacteria

family: Frankiaceae

full scientific name: Frankia discariae Nouioui et al. 2017

genus: Frankia

keyword: phylum/actinomycetota

order: Frankiales

phylum: Actinomycetota

species: Frankia discariae

synonym: Parafrankia discariae

class: Actinobacteria

order: Actinomycetales

phylum: Actinobacteria

type strain: yes

database: nuccore

description: Parafrankia discariae strain BCU110501 16S ribosomal RNA gene, partial sequence

assembly level: scaffold

description: ASM37336v1 assembly for Parafrankia discariae BCU110501


class: Gammaproteobacteria

description: domain/bacteria

family: Orbaceae

full scientific name: Gilliamella mensalis Praet et al. 2017

genus: Gilliamella

keyword: phylum/pseudomonadota

order: Orbales

phylum: Pseudomonadota

species: Gilliamella mensalis

phylum: Proteobacteria

description: Gilliamella mensalis strain LMG 29880 16S ribosomal RNA, partial sequence

description: Gilliamella sp. R-54852 partial 16S rRNA gene, strain LMG29880, isolate R-54852


class: Alphaproteobacteria

description: domain/bacteria

family: Erythrobacteraceae

full scientific name: Novosphingobium pokkalii Krishnan et al. 2017

genus: Novosphingobium

order: Sphingomonadales

species: Novosphingobium pokkalii

family: Sphingomonadaceae

description: ASM1465285v1 assembly for Novosphingobium pokkalii KCTC 42224

description: ASM4264882v1 assembly for Novosphingobium pokkalii KCTC 42224

assembly level: contig

description: ASM4268576v1 assembly for Novosphingobium pokkalii KCTC 42224


description: domain/bacteria

family: Kineosporiaceae

full scientific name: Angustibacter speluncae Ko and Lee 2017

genus: Angustibacter

order: Kineosporiales

species: Angustibacter speluncae

type strain: no

description: Angustibacter sp. YC2-19 partial 16S rRNA gene, strain YC2-19


class: Bacilli

description: domain/bacteria

family: Listeriaceae

full scientific name: <I>Listeria</I> Pirie 1940 (Approved Lists 1980)

genus: Listeria

keyword: phylum/bacillota

order: Caryophanales

phylum: Bacillota

species: Listeria sp.

synonym: Murraya

synonym: Mesolisteria

synonym: Paenilisteria

full scientific name: Listeria sp.

order: Bacillales

phylum: Firmicutes

strain designation: Kiel-L1, L1

description: ASM336992v1 assembly for Listeria kieliensis Kiel-L1


class: Betaproteobacteria

description: domain/bacteria

family: Alcaligenaceae

full scientific name: Pigmentiphaga aceris Lee 2017

genus: Pigmentiphaga

order: Burkholderiales

species: Pigmentiphaga aceris

description: Pigmentiphaga sp. SAP-36 partial 16S rRNA gene, strain SAP-36


description: domain/bacteria

family: Roseobacteraceae

full scientific name: <I>Marinibacterium</I> Li et al. 2015

genus: Marinibacterium

order: Rhodobacterales

species: Marinibacterium sp.

family: Rhodobacteraceae

full scientific name: Marinibacterium sp.

description: Marine alpha proteobacterium SD7 16S ribosomal RNA gene, partial sequence


class: Flavobacteriia

description: domain/bacteria

family: Flavobacteriaceae

full scientific name: <I>Winogradskyella</I> Nedashkovskaya et al. 2005

genus: Winogradskyella

keyword: phylum/bacteroidota

order: Flavobacteriales

phylum: Bacteroidota

species: Winogradskyella sp.

full scientific name: Winogradskyella sp.

phylum: Bacteroidetes

description: Winogradskyella sp. U1368-101106-SW102 16S ribosomal RNA gene, partial sequence


class: Bacteroidia

description: domain/bacteria

family: Prolixibacteraceae

full scientific name: <I>Draconibacterium</I> Du et al. 2014

genus: Draconibacterium

order: Bacteroidales

species: Draconibacterium sp.

full scientific name: Draconibacterium sp.


class: Halobacteria

description: domain/archaea

domain: Archaea

family: Haloferacaceae

full scientific name: <I>Halobellus</I> Cui et al. 2011

genus: Halobellus

keyword: phylum/methanobacteriota

order: Halobacteriales

phylum: Methanobacteriota

species: Halobellus sp.

full scientific name: Halobellus sp.

phylum: Euryarchaeota

description: Halobellus sp. A1FP7 16S ribosomal RNA gene, partial sequence


class: Balneolia

description: domain/bacteria

family: Balneolaceae

full scientific name: <I>Fodinibius</I> Wang et al. 2012

genus: Fodinibius

keyword: phylum/balneolota

order: Balneolales

phylum: Balneolota

species: Fodinibius sp.

synonym: Aliifodinibius

full scientific name: Aliifodinibius sp.

genus: Aliifodinibius

order: Bacteroidetes, not assigned to order

phylum: Balneolaeota

species: Aliifodinibius sp.


class: Sphingobacteriia

description: domain/bacteria

family: Sphingobacteriaceae

full scientific name: <I>Parapedobacter</I> Kim et al. 2007

genus: Parapedobacter

order: Sphingobacteriales

species: Parapedobacter sp.

full scientific name: Parapedobacter sp.

description: Bacteroidetes bacterium AK43 6.1 16S ribosomal RNA gene, partial sequence


class: Chitinophagia

description: domain/bacteria

family: Chitinophagaceae

full scientific name: <I>Flavisolibacter</I> Yoon and Im 2007

genus: Flavisolibacter

order: Chitinophagales

species: Flavisolibacter sp.

full scientific name: Flavisolibacter sp.

description: Flavisolibacter sp. Gsoil 439 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: <I>Flagellimonas</I> Bae et al. 2007

genus: Flagellimonas

species: Flagellimonas sp.

synonym: Spongiibacterium

synonym: Allomuricauda

synonym: Muricauda

full scientific name: Flagellimonas sp.

description: Flavobacteriaceae bacterium A9 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: <I>Wenyingzhuangia</I> Liu et al. 2014

genus: Wenyingzhuangia

species: Wenyingzhuangia sp.

full scientific name: Wenyingzhuangia sp.

description: Flavobacteriaceae bacterium KLE1008 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Halieaceae

full scientific name: <I>Haliea</I> Urios et al. 2008

genus: Haliea

order: Cellvibrionales

species: Haliea sp.

full scientific name: Haliea sp.

order: Alteromonadales

description: Haliea sp. SY02 16S ribosomal RNA gene, partial sequence


class: Phycisphaerae

description: domain/bacteria

family: Sedimentisphaeraceae

full scientific name: Sedimentisphaera salicampi Spring et al. 2018

genus: Sedimentisphaera

keyword: phylum/planctomycetota

order: Sedimentisphaerales

phylum: Planctomycetota

species: Sedimentisphaera salicampi

phylum: Planctomycetes

description: Sedimentisphaera salicampi strain SM-PulAB-D3 16S ribosomal RNA gene, partial sequence

description: ASM223962v1 assembly for Sedimentisphaera salicampi SM-PulAB-D3


description: domain/bacteria

description: Sedimentisphaera salicampi strain ST-PulAB-D4 16S ribosomal RNA gene, partial sequence

assembly level: complete

description: ASM211700v1 assembly for Sedimentisphaera salicampi ST-PulAB-D4


description: domain/bacteria

full scientific name: Sedimentisphaera cyanobacteriorum Spring et al. 2018

species: Sedimentisphaera cyanobacteriorum

description: Sedimentisphaera cyanobacteriorum strain L21-RPul-D3 16S ribosomal RNA gene, partial sequence

description: ASM199738v1 assembly for Sedimentisphaera cyanobacteriorum L21-RPul-D3


description: domain/bacteria

family: Steroidobacteraceae

full scientific name: Steroidobacter cummioxidans Sharma et al. 2018

genus: Steroidobacter

order: Nevskiales

species: Steroidobacter cummioxidans

full scientific name: Steroidobacter cummioxidans

order: Xanthomonadales

description: ASM310495v1 assembly for Steroidobacter cummioxidans 35Y


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: Pseudonocardia lutea Gao et al. 2018

genus: Pseudonocardia

order: Pseudonocardiales

species: Pseudonocardia lutea

order: Actinomycetales

description: Pseudonocardia lutea strain NEAU-G57 16S ribosomal RNA gene, partial sequence

description: ASM4265805v1 assembly for Pseudonocardia lutea CGMCC 4.7397


description: domain/bacteria

family: Streptosporangiaceae

full scientific name: Nonomuraea insulae Saricaoglu et al. 2019

genus: Nonomuraea

order: Streptosporangiales

species: Nonomuraea insulae

description: Nonomuraea insulae 16S ribosomal RNA gene, partial sequence

description: ASM4265624v1 assembly for Nonomuraea insulae CGMCC 4.7338


description: domain/bacteria

family: Acetobacteraceae

full scientific name: Acidocella aquatica Okamoto et al. 2017

genus: Acidocella

order: Rhodospirillales

species: Acidocella aquatica

order: Rhizobiales

description: Acidocella aquatica gene for 16S ribosomal RNA, partial sequence

description: ASM3016063v1 assembly for Acidocella aquatica NBRC 112502


description: domain/bacteria

family: Xanthobacteraceae

full scientific name: Ancylobacter pratisalsi Suarez et al. 2017

genus: Ancylobacter

order: Hyphomicrobiales

species: Ancylobacter pratisalsi

description: Ancylobacter pratisalsi strain E130 16S ribosomal RNA gene, partial sequence

description: ASM1066912v1 assembly for Ancylobacter pratisalsi DSM 102029


description: domain/bacteria

family: Micrococcaceae

full scientific name: Arthrobacter silviterrae Lee et al. 2017

genus: Arthrobacter

order: Micrococcales

species: Arthrobacter silviterrae

description: Arthrobacter silviterrae strain KIS14-16 16S ribosomal RNA gene, partial sequence

description: ASM1104516v1 assembly for Arthrobacter silviterrae DSM 27180

description: ASM3081393v1 assembly for Arthrobacter silviterrae DSM 27180


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces roietensis Kaewkla and Franco 2017

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces roietensis

description: Streptomyces roietensis strain WES2 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Bacillaceae

full scientific name: Gottfriedia solisilvae (Pan et al. 2017) Gupta et al. 2020

genus: Gottfriedia

order: Caryophanales

species: Gottfriedia solisilvae

synonym: Bacillus solisilvae

order: Bacillales

description: Gottfriedia solisilvae strain NEAU-cbsb5 16S ribosomal RNA gene, partial sequence

description: Bacillus solisilvae strain CGMCC 1.14993 16S ribosomal RNA gene, partial sequence.

description: ASM212840v1 assembly for Gottfriedia solisilvae NEAU-cbsb5

description: ASM1464049v1 assembly for Gottfriedia solisilvae CGMCC 1.14993


description: domain/bacteria

family: Cytobacillaceae

full scientific name: Cytobacillus solani (Liu et al. 2015) Patel and Gupta 2020

genus: Cytobacillus

species: Cytobacillus solani

synonym: Bacillus ciccensis

synonym: Cytobacillus ciccensis

synonym: Bacillus solani

full scientific name: Cytobacillus ciccensis (Liu et al. 2017) Gupta et al. 2020

species: Cytobacillus ciccensis

description: Cytobacillus solani strain 5L6 16S ribosomal RNA gene, partial sequence

description: Bacillus ciccensis strain CICC 23855 16S ribosomal RNA gene, partial sequence.

description: ASM670420v1 assembly for Cytobacillus solani 5L6

description: ASM4243370v1 assembly for Cytobacillus solani CICC 23855


description: domain/bacteria

family: Chelatococcaceae

full scientific name: Chelatococcus thermostellatus Ibrahim et al. 2016

genus: Chelatococcus

species: Chelatococcus thermostellatus

full scientific name: Chelatococcus thermostellatus

description: Chelatococcus thermostellatus strain MW9 16S ribosomal RNA gene, partial sequence


class: Bacillota, not assigned to class

description: domain/bacteria

family: Bacillota, not assigned to family

full scientific name: Caecibacterium sporoformans Oren et al. 2019

genus: Caecibacterium

order: Bacillota, not assigned to order

species: Caecibacterium sporoformans

synonym: Caecibacterium sporoformans

class: Firmicutes, not assigned to class

family: Firmicutes, not assigned to family

order: Firmicutes, not assigned to order

description: Caecibacterium sporoformans 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Caecibacterium sporoformans strain 77-5d 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium grossiae Paniz-Mondolfi et al. 2017

genus: Mycobacterium

order: Mycobacteriales

species: Mycobacterium grossiae

synonym: Mycolicibacterium grossiae

description: Mycolicibacterium grossiae 16S ribosomal RNA gene, partial sequence

description: ASM832964v1 assembly for Mycolicibacterium grossiae DSM 104744


description: domain/bacteria

full scientific name: <I>Halalkalibacillus</I> Echigo et al. 2007

genus: Halalkalibacillus

species: Halalkalibacillus sp.

full scientific name: Halalkalibacillus sp.

strain designation: CH 6


description: domain/bacteria

family: Ornithinimicrobiaceae

full scientific name: Ornithinimicrobium flavum Fang et al. 2017

genus: Ornithinimicrobium

species: Ornithinimicrobium flavum

description: Ornithinimicrobium flavum 16S ribosomal RNA gene, partial sequence

description: Ornithinimicrobium flavum strain CPCC 203535 16S ribosomal RNA gene, partial sequence.

description: ASM452634v1 assembly for Ornithinimicrobium flavum CPCC 203535


description: domain/bacteria

full scientific name: Amycolatopsis oliviviridis Penkhrue et al. 2018

genus: Amycolatopsis

species: Amycolatopsis oliviviridis

description: Amycolatopsis oliviviridis gene for 16S rRNA, partial sequence

description: Amycolatopsis sp. SCM_MK2-4 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

family: Bartonellaceae

full scientific name: <I>Phyllobacterium</I> (ex Knösel 1962) Knösel 1984

genus: Phyllobacterium

species: Phyllobacterium sp.

synonym: Paramesorhizobium

family: Phyllobacteriaceae

full scientific name: Phyllobacterium sp.

strain designation: Uhl-5, URh-5

description: Phyllobacterium sp. DSM 17640 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

full scientific name: Saccharopolyspora hattusasensis Veyisoglu et al. 2018

genus: Saccharopolyspora

species: Saccharopolyspora hattusasensis

description: Saccharopolyspora hattusasensis strain CR3506 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Caryophanaceae

full scientific name: Psychrobacillus lasiicapitis Shen et al. 2017

genus: Psychrobacillus

species: Psychrobacillus lasiicapitis

description: Psychrobacillus lasiicapitis strain NEAU-3TGS17 16S ribosomal RNA gene, partial sequence

description: ASM686179v1 assembly for Psychrobacillus lasiicapitis NEAU-3TGS17

description: ASM1464167v1 assembly for Psychrobacillus lasiicapitis CGMCC 1.15308


description: domain/bacteria

family: Marinifilaceae

full scientific name: Labilibaculum manganireducens Vandieken et al. 2019

genus: Labilibaculum

order: Bacteroidales

species: Labilibaculum manganireducens

synonym: Marinifilum manganireducens

description: Bacteroidota bacterium strain 59.10-2M 16S ribosomal RNA gene, partial sequence

description: ASM284338v1 assembly for Labilibaculum manganireducens 59.10-2M

description: Labilibaculum manganireducens 59.10-2M


description: domain/bacteria

full scientific name: Labilibaculum filiforme Vandieken et al. 2019

species: Labilibaculum filiforme

synonym: Marinifilum filiforme

description: Bacteroidota bacterium strain 59.16B 16S ribosomal RNA gene, partial sequence

description: ASM284331v1 assembly for Labilibaculum filiforme 59.16B


description: domain/bacteria

family: Rhodanobacteraceae

full scientific name: Frateuria defendens Lidor et al. 2019

genus: Frateuria

order: Lysobacterales

species: Frateuria defendens

strain designation: DLB, Dho

description: Frateuria defendens strain Dho 16S ribosomal RNA gene, partial sequence

description: ASM118289v1 assembly for Frateuria defendens DHo


description: domain/bacteria

family: Paracoccaceae

full scientific name: Thioclava sediminum Liu et al. 2017

genus: Thioclava

order: Rhodobacterales

species: Thioclava sediminum

synonym: Thioclava electrotropha

family: Rhodobacteraceae

strain designation: ElOx 9

description: Thioclava sp. ElOx 9 16S ribosomal RNA gene, partial sequence

description: Thioclava electrotropha strain ELOx9 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Roseobacteraceae

full scientific name: Phaeobacter piscinae Sonnenschein et al. 2017

genus: Phaeobacter

species: Phaeobacter piscinae

description: Phaeobacter sp. 27-4 partial 16S rRNA gene, isolate 27-4


description: domain/bacteria

family: Rhizobiaceae

full scientific name: Gellertiella hungarica Tóth et al. 2017

genus: Gellertiella

species: Gellertiella hungarica

description: Sinorhizobium sp. RAM11 partial 16S rRNA gene, strain RAM11, isolate 60

description: Gellertiella hungarica strain NCAIM B.02618 16S ribosomal RNA gene, partial sequence.

description: ASM1419714v1 assembly for Gellertiella hungarica DSM 29853

description: ASM4243362v1 assembly for Gellertiella hungarica NCAIM B.02618


description: domain/bacteria

family: Vibrionaceae

full scientific name: Photobacterium carnosum Hilgarth et al. 2018

genus: Photobacterium

order: Vibrionales

species: Photobacterium carnosum

order: Vibrionales, not validated

description: ASM2792334v1 assembly for Photobacterium carnosum CECT 9394


description: domain/bacteria

family: Neisseriaceae

full scientific name: Neisseria dumasiana Wroblewski et al. 2017

genus: Neisseria

order: Neisseriales

species: Neisseria dumasiana

description: Neisseria dumasiana strain 93087 16S ribosomal RNA gene, partial sequence

description: ASM210850v1 assembly for Neisseria dumasiana 93087

description: ASM2287088v1 assembly for Neisseria dumasiana LMG 30012


description: domain/bacteria

family: Caulobacteraceae

full scientific name: Phenylobacterium deserti Khan et al. 2017

genus: Phenylobacterium

order: Caulobacterales

species: Phenylobacterium deserti

description: Phenylobacterium sp. YIM 73061 gene for 16S ribosomal RNA, partial sequence

description: ASM325470v1 assembly for Phenylobacterium deserti YIM 73061


description: domain/bacteria

full scientific name: Aliiroseovarius lamellibrachiae (Nogi et al. 2017) Zhang et al. 2023

genus: Aliiroseovarius

species: Aliiroseovarius lamellibrachiae

synonym: Planktotalea lamellibrachiae

order: Not assigned to order

description: Planktotalea lamellibrachiae gene for 16S ribosomal RNA, partial sequence

description: Planktotalea lamellibrachiae strain DSM 104669 16S ribosomal RNA gene, partial sequence.

description: ASM1859924v1 assembly for Aliiroseovarius lamellibrachiae DSM 104669


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Polynucleobacter aenigmaticus Hahn et al. 2017

genus: Polynucleobacter

order: Burkholderiales

species: Polynucleobacter aenigmaticus

description: ASM220663v1 assembly for Polynucleobacter aenigmaticus MWH-K35W1


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Izhakiella australiensis Ji et al. 2017

genus: Izhakiella

order: Enterobacterales

species: Izhakiella australiensis

description: Izhakiella australiensis strain D4N98 16S ribosomal RNA gene, partial sequence

description: ASM200699v1 assembly for Izhakiella australiensis D4N98


description: domain/bacteria

family: Kineosporiaceae

full scientific name: Kineococcus terrestris corrig. Xu et al. 2017

genus: Kineococcus

order: Kineosporiales

species: Kineococcus terrestris

synonym: Kineococcus terreus

synonym: Kineococcus aureolus

full scientific name: Kineococcus aureolus Xu et al. 2017

order: Actinomycetales

species: Kineococcus aureolus

description: Kineococcus aureolus strain YIM 121940 16S ribosomal RNA gene, partial sequence

description: Kineococcus aureolus strain KCTC 39739 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

full scientific name: Kineococcus terrestris Xu et al. 2017

description: Kineococcus terrestris strain YIM 121936 16S ribosomal RNA gene, partial sequence

description: Kineococcus terrestris strain KCTC 39738 16S ribosomal RNA gene, partial sequence.

description: ASM4102076v1 assembly for Kineococcus terrestris KCTC 39738


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: Lentzea rhizosphaerae (Zhao et al. 2017) Yang and Zhi 2020

genus: Lentzea

order: Pseudonocardiales

species: Lentzea rhizosphaerae

synonym: Lechevalieria rhizosphaerae

full scientific name: Lechevalieria rhizosphaerae Zhao et al. 2017

genus: Lechevalieria

species: Lechevalieria rhizosphaerae

description: Lentzea rhizosphaerae strain NEAU-A2 16S ribosomal RNA gene, partial sequence

description: ASM4264951v1 assembly for Lentzea rhizosphaerae CGMCC 4.7405


class: Clostridia

description: domain/bacteria

family: Halanaerobiaceae

full scientific name: <I>Halanaerobium</I> corrig. Zeikus et al. 1984

genus: Halanaerobium

order: Halanaerobiales

species: Halanaerobium sp.

synonym: Haloincola

synonym: Haloanaerobium

full scientific name: Halanaerobium sp.


description: domain/bacteria

full scientific name: <I>Buttiauxella</I> Ferragut et al. 1982

genus: Buttiauxella

species: Buttiauxella sp.

full scientific name: Buttiauxella sp.

order: Enterobacteriales, not validated


description: domain/bacteria

family: Hafniaceae

full scientific name: <I>Hafnia</I> Møller 1954 (Approved Lists 1980)

genus: Hafnia

species: Hafnia sp.

full scientific name: Hafnia sp.


description: domain/bacteria

family: Pectobacteriaceae

full scientific name: Pectobacterium polare corrig. Dees et al. 2017

genus: Pectobacterium

species: Pectobacterium polare

synonym: Pectobacterium polaris

full scientific name: Pectobacterium polaris Dees et al. 2017

species: Pectobacterium polaris

description: ASM230735v1 assembly for Pectobacterium polaris NIBIO1006

description: ASM4022513v1 assembly for Pectobacterium polaris DSM 105255


description: domain/bacteria

full scientific name: Lentzea pudingi Cao et al. 2017

species: Lentzea pudingi

description: Lentzea pudingi strain DHS C021 16S ribosomal RNA gene, partial sequence

description: ASM1464625v1 assembly for Lentzea pudingi CGMCC 4.7319


description: domain/bacteria

family: Streptosporangiaceae

full scientific name: Nonomuraea cavernae Fang et al. 2017

genus: Nonomuraea

order: Streptosporangiales

species: Nonomuraea cavernae

description: Nonomuraea cavernae strain SYSU K10005 16S ribosomal RNA gene, partial sequence

description: ASM1464635v1 assembly for Nonomuraea cavernae CGMCC 4.7368

description: ASM4266042v1 assembly for Nonomuraea cavernae CGMCC 4.7368

description: ASM2021590v1 assembly for Nonomuraea cavernae SYSU K10005


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Paenibacillus arcticus Cha et al. 2017

genus: Paenibacillus

order: Caryophanales

species: Paenibacillus arcticus

order: Bacillales

description: Paenibacillus arcticus strain MME2_R6 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Acidiferrobacteraceae

full scientific name: <I>Acidiferrobacter</I> Hallberg et al. 2011

genus: Acidiferrobacter

order: Acidiferrobacterales

species: Acidiferrobacter sp.

full scientific name: Acidiferrobacter sp.

order: Chromatiales

description: Acidiferrobacter sp. SPIII_3 16S ribosomal RNA gene, partial sequence

description: ASM318426v1 assembly for Acidiferrobacter sp. SPIII_3


description: domain/bacteria

family: Bacillaceae

full scientific name: Salirhabdus salicampi Lee and Whang 2017

genus: Salirhabdus

species: Salirhabdus salicampi

description: Salirhabdus salicampi strain BH128 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Nocardiaceae

full scientific name: Nocardia tengchongensis Li et al. 2017

genus: Nocardia

order: Mycobacteriales

species: Nocardia tengchongensis

description: Nocardia tengchongensis strain CFH S0057 16S ribosomal RNA gene, partial sequence

description: ASM1836297v1 assembly for Nocardia tengchongensis CFH S0057


description: domain/bacteria

description: Nocardia tengchongensis strain CFH S0065 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Rhodococcus gannanensis Ma et al. 2017

genus: Rhodococcus

species: Rhodococcus gannanensis

description: Rhodococcus gannanensis strain M1 16S ribosomal RNA gene, partial sequence

description: ASM4268117v1 assembly for Rhodococcus gannanensis CGMCC 1.15992


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Alitiscatomonas aceti Hitch et al. 2022

genus: Alitiscatomonas

order: Eubacteriales

species: Alitiscatomonas aceti

full scientific name: Alitiscatomonas aceti


description: domain/bacteria

full scientific name: <I>Lachnospira</I> Bryant and Small 1956 (Approved Lists 1980)

genus: Lachnospira

species: Lachnospira sp.

full scientific name: Lachnospira sp.

order: Clostridiales

strain designation: f-EEL


class: Epsilonproteobacteria

description: domain/bacteria

family: Nautiliaceae

full scientific name: Lebetimonas natsushimae Nagata et al. 2017

genus: Lebetimonas

order: Nautiliales

species: Lebetimonas natsushimae

description: Lebetimonas natsushimae gene for 16S ribosomal RNA, partial sequence

description: ASM233544v1 assembly for Lebetimonas natsushimae HS1857


class: Actinomycetes

description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces polaris Kamjam et al. 2025

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces polaris

full scientific name: Streptomyces polaris

description: Streptomyces polaris 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Streptomyces septentrionalis Kamjam et al. 2025

species: Streptomyces septentrionalis

class: Actinobacteria

full scientific name: Streptomyces septentrionalis

description: Streptomyces septentrionalis 16S ribosomal RNA gene, partial sequence


class: Terriglobia

description: domain/bacteria

family: Acidobacteriaceae

full scientific name: Tunturiibacter lichenicola corrig. (Belova et al. 2018) Messyasz et al. 2024

genus: Tunturiibacter

keyword: phylum/acidobacteriota

order: Terriglobales

phylum: Acidobacteriota

species: Tunturiibacter lichenicola

synonym: Tunturibacter lichenicola

synonym: Edaphobacter lichenicola

class: Acidobacteriia

full scientific name: Edaphobacter lichenicola Belova et al. 2018

genus: Edaphobacter

order: Acidobacteriales

phylum: Acidobacteria

species: Edaphobacter lichenicola

description: Edaphobacter lichenicola strain SBC68 16S ribosomal RNA gene, partial sequence

description: ASM2526464v1 assembly for Tunturiibacter lichenicola DSM 104462


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Winogradskyella haliclonae Schellenberg et al. 2017

genus: Winogradskyella

order: Flavobacteriales

species: Winogradskyella haliclonae

description: Winogradskyella haliclonae strain M1A16 16S ribosomal RNA gene, partial sequence

description: Winogradskyella haliclonae strain CCM 8681 16S ribosomal RNA gene, partial sequence.

description: ASM1463586v1 assembly for Winogradskyella haliclonae CCM 8681


description: domain/bacteria

family: Oscillospiraceae

full scientific name: Monoglobus pectinilyticus Kim et al. 2017

genus: Monoglobus

species: Monoglobus pectinilyticus

description: Monoglobus pectinilyticus strain 14 16S ribosomal RNA gene, partial sequence

assembly level: chromosome

description: ASM287477v1 assembly for Monoglobus pectinilyticus 14


description: domain/bacteria

family: Clostridiaceae

full scientific name: Clostridium pabulibutyricum Kobayashi et al. 2017

genus: Clostridium

species: Clostridium pabulibutyricum

order: Anaeroplasmatales

description: Clostridium pabulibutyricum gene for 16S ribosomal RNA, partial sequence


class: Desulfovibrionia

description: domain/bacteria

family: Desulfonatronaceae

full scientific name: Desulfonatronum parangueonense Pérez Bernal et al. 2017

genus: Desulfonatronum

keyword: phylum/thermodesulfobacteriota

order: Desulfovibrionales

phylum: Thermodesulfobacteriota

species: Desulfonatronum parangueonense

class: Deltaproteobacteria

description: Desulfonatronum parangueonense strain PAR180 16S ribosomal RNA gene, partial sequence


class: Bacilli

description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus wangshanyuanii Jin et al. 2017

genus: Enterococcus

order: Lactobacillales

species: Enterococcus wangshanyuanii

description: Enterococcus wangshanyuanii strain MN05 16S ribosomal RNA gene, partial sequence

description: ASM219764v1 assembly for Enterococcus wangshanyuanii MN05

description: ASM1464425v1 assembly for Enterococcus wangshanyuanii CGMCC 1.15942


class: Betaproteobacteria

description: domain/bacteria

family: Burkholderiaceae

full scientific name: Caballeronia mineralivorans Uroz and Oger 2019

genus: Caballeronia

order: Burkholderiales

species: Caballeronia mineralivorans

description: ASM102817v1 assembly for Caballeronia mineralivorans PML1(12)


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium kyogaense Nouioui et al. 2018

genus: Mycobacterium

phylum: Actinomycetota

species: Mycobacterium kyogaense

order: Actinomycetales

description: Mycobacterium kyogaense strain NCTC 11659 16S ribosomal RNA gene, partial sequence

description: ASM325457v1 assembly for Mycobacterium kyogaense NCTC 11659

description: Mycobacterium sp. NCTC 11659


class: Gammaproteobacteria

description: domain/bacteria

family: Shewanellaceae

full scientific name: Shewanella carassii Fang et al. 2017

genus: Shewanella

order: Alteromonadales

species: Shewanella carassii

description: Shewanella carassii strain 08MAS2251 16S ribosomal RNA gene, partial sequence

description: ASM1464437v1 assembly for Shewanella carassii CGMCC 1.16033

description: ASM277797v1 assembly for Shewanella carassii 08MAS2251


full scientific name: Streptomyces myrophorea

phylum: Actinobacteria

species: Streptomyces myrophorea

strain designation: McG#1, McG1


description: domain/bacteria

family: Nocardioidaceae

full scientific name: Nocardioides houyundeii Wang et al. 2018

genus: Nocardioides

order: Propionibacteriales

species: Nocardioides houyundeii

description: Nocardioides houyundeii 16S ribosomal RNA gene, partial sequence

description: ASM286558v1 assembly for Nocardioides houyundeii 78


description: domain/bacteria

full scientific name: Streptomyces tritici Zhao et al. 2018

species: Streptomyces tritici

description: Streptomyces tritici strain NEAU-A4 16S ribosomal RNA gene, partial sequence

description: ASM4850066v1 assembly for Streptomyces tritici CGMCC 4.7393


description: domain/bacteria

full scientific name: Streptacidiphilus monticola Song et al. 2018

genus: Streptacidiphilus

species: Streptacidiphilus monticola

description: Streptacidiphilus monticola strain NEAU-SW11 16S ribosomal RNA gene, partial sequence

description: ASM4265850v1 assembly for Streptacidiphilus monticola CGMCC 4.7427

description: ASM4267506v1 assembly for Streptacidiphilus monticola CGMCC 4.7427


description: domain/bacteria

family: Streptosporangiaceae

full scientific name: Nonomuraea lycopersici Zheng et al. 2018

genus: Nonomuraea

order: Streptosporangiales

species: Nonomuraea lycopersici

description: Nonomuraea lycopersici 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Glycomycetaceae

full scientific name: Glycomyces tritici Li et al. 2024

genus: Glycomyces

order: Glycomycetales

species: Glycomyces tritici

full scientific name: Glycomyces tritici Li et al. 2018

description: Glycomyces tritici 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Glycomyces rhizosphaerae Li et al. 2018

species: Glycomyces rhizosphaerae

description: Glycomyces rhizosphaerae strain NEAU-C11 16S ribosomal RNA gene, partial sequence

description: ASM4264786v1 assembly for Glycomyces rhizosphaerae CGMCC 4.7396


description: domain/bacteria

full scientific name: Streptomyces flavalbus Cao et al. 2018

species: Streptomyces flavalbus

description: Streptomyces flavalbus 16S ribosomal RNA gene, partial sequence

description: ASM4267462v1 assembly for Streptomyces flavalbus CGMCC 4.7400


description: domain/bacteria

family: Micromonosporaceae

full scientific name: Plantactinospora solaniradicis Li et al. 2018

genus: Plantactinospora

order: Micromonosporales

species: Plantactinospora solaniradicis

description: Plantactinospora solaniradicis strain NEAU-FJL1 16S ribosomal RNA gene, partial sequence

description: ASM4265808v1 assembly for Plantactinospora solaniradicis CGMCC 4.7284


class: Alphaproteobacteria

description: domain/bacteria

family: Roseobacteraceae

full scientific name: Tritonibacter horizontis Klotz et al. 2018

genus: Tritonibacter

order: Rhodobacterales

phylum: Pseudomonadota

species: Tritonibacter horizontis

synonym: Epibacterium horizontis

family: Rhodobacteraceae

description: ASM151801v1 assembly for Tritonibacter horizontis O3.65


description: domain/bacteria

family: Nocardiaceae

full scientific name: Nocardia rhizosphaerihabitans Ding et al. 2018

genus: Nocardia

order: Mycobacteriales

species: Nocardia rhizosphaerihabitans

description: Nocardia rhizosphaerihabitans strain KLBMP S0039 16S ribosomal RNA gene, partial sequence

description: ASM1464629v1 assembly for Nocardia rhizosphaerihabitans CGMCC 4.7329


description: domain/bacteria

family: Acetobacteraceae

full scientific name: Teichococcus globiformis (Fang et al. 2018) Liu and Xin 2025

genus: Teichococcus

order: Rhodospirillales

species: Teichococcus globiformis

synonym: Roseomonas globiformis

synonym: Pseudoroseomonas globiformis

full scientific name: Roseomonas globiformis Fang et al. 2018

genus: Roseomonas

order: Rhizobiales

phylum: Proteobacteria

species: Roseomonas globiformis

description: Pseudoroseomonas globiformis strain CPCC100847 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Thermostaphylospora grisealba Wu et al. 2018

genus: Thermostaphylospora

species: Thermostaphylospora grisealba

description: Thermostaphylospora grisealba strain 3-12X 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Palleronia pontilimi (Lee 2018) Barnier et al. 2022

genus: Palleronia

species: Palleronia pontilimi

synonym: Tranquillimonas pontilimi

synonym: Maribius pontilimi

full scientific name: Maribius pontilimi Lee 2018

genus: Maribius

species: Maribius pontilimi

description: Maribius sp. GH1-23 partial 16S rRNA gene, strain GH1-23

description: ASM1641287v1 assembly for Palleronia pontilimi KCTC 52957


Matching level: strain

class: Chroococcophyceae

description: domain/bacteria

family: Calotrichaceae

full scientific name: Dulcicalothrix desertica (Schwabe 1960) Saraf et al. 2019

genus: Dulcicalothrix

keyword: phylum/cyanobacteriota

order: Nostocales

phylum: Cyanobacteriota

species: Dulcicalothrix desertica

synonym: Calothrix desertica

class: Cyanophyceae

full scientific name: Dulcicalothrix desertica Saraf A et al.

phylum: Cyanobacteria

description: Dulcicalothrix desertica PCC 7102 16S ribosomal RNA gene, partial sequence

description: Calothrix desertica PCC 7102 gene for 16S rRNA, partial sequence.

description: Calothrix desertica PCC 7102 partial 16S rRNA gene, strain PCC 7102

description: ASM783087v1 assembly for Dulcicalothrix desertica PCC 7102

description: ASM399190v1 assembly for Dulcicalothrix desertica PCC 7102


description: domain/bacteria

family: Chroococcidiopsidaceae

full scientific name: Chroococcidiopsis cubana Komárek and Hindák 1975

genus: Chroococcidiopsis

order: Chroococcidiopsidales

species: Chroococcidiopsis cubana

full scientific name: Chroococcidiopsis cubana

description: Chroococcidiopsis cubana partial 16S rRNA gene, strain SAG 39.79

description: Chroococcidiopsis cubana SAG 39.79 16S ribosomal RNA gene, partial sequence.

description: ASM399189v1 assembly for Chroococcidiopsis cubana SAG 39.79


description: domain/bacteria

family: Thiobacteraceae

full scientific name: <I>Thiobacter</I> Hirayama et al. 2005

genus: Thiobacter

species: Thiobacter sp.

family: Burkholderiales, not assigned to family

full scientific name: Thiobacter sp.

description: Thiobacter sp. SL-1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Eubacteriales, not assigned to family

full scientific name: <I>Fenollaria</I> Pagnier et al. 2018

genus: Fenollaria

order: Eubacteriales

phylum: Bacillota

species: Fenollaria sp.

full scientific name: Fenollaria sp.

phylum: Firmicutes

description: Sporobacterium sp. WAL 1855D 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Clostridiaceae

full scientific name: <I>Lutispora</I> Shiratori et al. 2008

genus: Lutispora

species: Lutispora sp.

full scientific name: Lutispora sp.

order: Clostridiales


description: domain/bacteria

full scientific name: Fenollaria massiliensis Pagnier et al. 2018

species: Fenollaria massiliensis

description: Fenollaria massiliensis strain 9401234 16S ribosomal RNA gene, partial sequence

description: Cb_9401234 assembly for Fenollaria massiliensis 9401234


description: domain/bacteria

family: Lachnospiraceae

full scientific name: <I>Faecalicatena</I> Sakamoto et al. 2017

genus: Faecalicatena

species: Faecalicatena sp.

synonym: Zymobacterium

full scientific name: Faecalicatena sp.

strain designation: PEH A

description: Eubacteriaceae bacterium PEH A 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Bovifimicola ammoniilytica Hitch et al. 2025

genus: Bovifimicola

species: Bovifimicola ammoniilytica


class: Methanomicrobia

description: domain/archaea

family: Methanomicrobiaceae

full scientific name: <I>Methanofollis</I> Zellner et al. 1999

genus: Methanofollis

order: Methanomicrobiales

phylum: Methanobacteriota

species: Methanofollis sp.

full scientific name: Methanofollis sp.

description: Methanofollis sp. YCM2 16S ribosomal RNA gene, partial sequence


class: Dictyoglomeria

description: domain/bacteria

family: Dictyoglomeraceae

full scientific name: <I>Dictyoglomus</I> Saiki et al. 1985

genus: Dictyoglomus

keyword: phylum/dictyoglomerota

order: Dictyoglomerales

phylum: Dictyoglomerota

species: Dictyoglomus sp.

class: Dictyoglomia

family: Dictyoglomaceae

full scientific name: Dictyoglomus sp.

order: Dictyoglomales

phylum: Dictyoglomi

description: Dictyoglomus sp. 1512 16S ribosomal RNA gene, partial sequence


class: Clostridia

description: domain/bacteria

family: Natronincolaceae

full scientific name: <I>Natronincola</I> corrig. Zhilina et al. 1999

genus: Natronincola

order: Peptostreptococcales

species: Natronincola sp.

synonym: Natronoincola

full scientific name: Natronincola sp.

description: Clostridiales bacterium AHT16 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Neomoorellaceae

full scientific name: <I>Thermanaeromonas</I> Mori et al. 2002

genus: Thermanaeromonas

order: Desulfitibacterales

species: Thermanaeromonas sp.

family: Thermoanaerobacteraceae

full scientific name: Thermanaeromonas sp.

order: Thermoanaerobacterales


culture collection no.: DSM 23046, ATCC BAA-1910, OCF 9

full scientific name: Anoxycellum osoensis

genus: Anoxycellum

order: Not assigned to order

species: Anoxycellum osoensis

description: Clostridiaceae bacterium OCF 9 16S ribosomal RNA gene, partial sequence


family: Ruminococcaceae

full scientific name: Massilimalia sp.

genus: Massilimalia

species: Massilimalia sp.

description: Clostridium sp. YIT 12070 gene for 16S rRNA, partial sequence


description: domain/bacteria

full scientific name: <I>Anaeromassilibacillus</I> Guilhot et al. 2016

genus: Anaeromassilibacillus

species: Anaeromassilibacillus sp.

full scientific name: Anaeromassilibacillus sp.

description: Clostridium sp. YIT 12069 gene for 16S rRNA, partial sequence


class: Methanonatronarchaeia

description: domain/archaea

family: Methanonatronarchaeaceae

full scientific name: Methanonatronarchaeum thermophilum Sorokin et al. 2018

genus: Methanonatronarchaeum

order: Methanonatronarchaeales

species: Methanonatronarchaeum thermophilum

phylum: Euryarchaeota

description: Methanonatronarchaeum thermophilum from Russia 16S ribosomal RNA gene, partial sequence

description: ASM215391v1 assembly for Methanonatronarchaeum thermophilum AMET1


description: domain/bacteria

family: Sphingomonadaceae

full scientific name: Sphingomonas montana Manandhar et al. 2018

genus: Sphingomonas

order: Sphingomonadales

species: Sphingomonas montana

synonym: Pararhizorhabdus montana

description: Sphingomonas montana strain W16RD 16S ribosomal RNA gene, partial sequence

description: ASM195631v1 assembly for Sphingomonas montana W16RD


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas silesiensis Kaminski et al. 2018

genus: Pseudomonas

order: Pseudomonadales

species: Pseudomonas silesiensis

order: Burkholderiales

description: Pseudomonas silesiensis strain A3 16S ribosomal RNA gene, partial sequence

description: ASM166107v1 assembly for Pseudomonas silesiensis A3


description: domain/bacteria

family: Vibrionaceae

full scientific name: Thaumasiovibrio occultus Amin et al. 2018

genus: Thaumasiovibrio

order: Vibrionales

species: Thaumasiovibrio occultus

description: Thaumasiovibrio occultus strain C4II189 16S ribosomal RNA gene, partial sequence

description: ASM1970381v1 assembly for Thaumasiovibrio occultus C4II189


description: domain/bacteria

full scientific name: Thaumasiovibrio subtropicus Amin et al. 2018

species: Thaumasiovibrio subtropicus

description: Thaumasiovibrio subtropicus strain C4V358 16S ribosomal RNA gene, partial sequence

description: ASM1970383v1 assembly for Thaumasiovibrio subtropicus C4V358

description: ASM215775v1 assembly for Thaumasiovibrio subtropicus


description: domain/bacteria

family: Rhizobiaceae

full scientific name: Ciceribacter azotifigens Siddiqi et al. 2018

genus: Ciceribacter

order: Hyphomicrobiales

species: Ciceribacter azotifigens

order: Rhizobiales

description: Ciceribacter azotifigens strain A.Slu09 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Caviibacterium pharyngocola Adhikary et al. 2018

genus: Caviibacterium

order: Pasteurellales

species: Caviibacterium pharyngocola

description: Bisgaard Taxon 5 partial 16S rRNA gene, strain CCUG 16493

description: Caviibacterium pharyngocola strain CCUG 16493 16S ribosomal RNA gene, partial sequence.

description: ASM279540v1 assembly for Caviibacterium pharyngocola 7.3


description: domain/bacteria

full scientific name: Conservatibacter flavescens Adhikary et al. 2018

genus: Conservatibacter

species: Conservatibacter flavescens

description: Conservatibacter flavescens strain CCUG 24852 16S ribosomal RNA gene, partial sequence.

description: ASM279542v1 assembly for Conservatibacter flavescens 7.4


description: domain/bacteria

family: Desulfovibrionaceae

full scientific name: Maridesulfovibrio salinus (Ben Ali Gam et al. 2018) Galushko and Kuever 2021

genus: Maridesulfovibrio

order: Desulfovibrionales

species: Maridesulfovibrio salinus

synonym: Desulfovibrio salinus

full scientific name: Maridesulfovibrio salinus

description: Maridesulfovibrio salinus strain P1BSR 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Proteiniborus indolifex Hahnke et al. 2018

genus: Proteiniborus

order: Eubacteriales

species: Proteiniborus indolifex

order: Clostridiales

description: Proteiniborus indolifex strain BA2-13 16S ribosomal RNA gene, partial sequence


class: Methanosarcinia

description: domain/archaea

family: Methanosarcinaceae

full scientific name: Methanolobus psychrotolerans Chen et al. 2018

genus: Methanolobus

order: Methanosarcinales

species: Methanolobus psychrotolerans

description: Methanolobus psychrotolerans strain YSF-03 16S ribosomal RNA gene, partial sequence

description: ASM224304v1 assembly for Methanolobus psychrotolerans YSF-03


description: domain/bacteria

full scientific name: Desulfothermobacter acidiphilus Frolov et al. 2018

genus: Desulfothermobacter

species: Desulfothermobacter acidiphilus

description: Desulfothermobacter acidiphilus strain 3408-1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Vibrio fujianensis Fang et al. 2018

genus: Vibrio

species: Vibrio fujianensis

order: Vibrionales, not validated

description: Vibrio fujianensis strain FJ201301 16S ribosomal RNA gene, partial sequence

description: ASM274989v1 assembly for Vibrio fujianensis FJ201301


class: Flavobacteriia

description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Aestuariimonas insulae Park et al. 2018

genus: Aestuariimonas

order: Flavobacteriales

phylum: Bacteroidota

species: Aestuariimonas insulae

phylum: Bacteroidetes

description: Aestuariimonas insulae strain OITF-44 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Pseudodesulfovibrio hydrargyri Ranchou-Peyruse et al. 2018

genus: Pseudodesulfovibrio

species: Pseudodesulfovibrio hydrargyri

description: Desulfovibrio sp. BerOc1 16S ribosomal RNA gene, partial sequence

description: ASM187452v1 assembly for Pseudodesulfovibrio hydrargyri BerOc1


class: Spirochaetia

description: domain/bacteria

family: Sphaerochaetaceae

full scientific name: Pleomorphochaeta naphthae Arroua et al. 2018

genus: Pleomorphochaeta

keyword: phylum/spirochaetota

order: Spirochaetales

phylum: Spirochaetota

species: Pleomorphochaeta naphthae

phylum: Spirochaetes

description: Pleomorphochaeta naphthae strain SEBR 4209 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Peptostreptococcaceae

full scientific name: Romboutsia hominis Gerritsen et al. 2018

genus: Romboutsia

order: Peptostreptococcales

species: Romboutsia hominis

family: Clostridiaceae

strain designation: FRIFI

description: Romboutsia hominis 16S ribosomal RNA gene, partial sequence

description: FRIFI assembly for Romboutsia hominis FRIFI


class: Actinomycetes

description: domain/bacteria

family: Kribbellaceae

full scientific name: Kribbella podocarpi Curtis et al. 2018

genus: Kribbella

order: Propionibacteriales

species: Kribbella podocarpi

class: Actinobacteria

order: Actinomycetales

description: Kribbella podocarpi strain YPL1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Oscillospiraceae

full scientific name: Petroclostridium xylanilyticum Zhang et al. 2018

genus: Petroclostridium

species: Petroclostridium xylanilyticum

description: Petroclostridium xylanilyticum strain SK-Y3 16S ribosomal RNA gene, partial sequence

description: ASM225256v1 assembly for Petroclostridium xylanilyticum SK-Y3


description: domain/bacteria

full scientific name: Butyricicoccus porcorum Trachsel et al. 2018

genus: Butyricicoccus

species: Butyricicoccus porcorum

description: Butyricicoccus porcorum strain BB10 16S ribosomal RNA gene, partial sequence

description: ASM215746v1 assembly for Butyricicoccus porcorum BB10


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces capitiformicae Jiang et al. 2018

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces capitiformicae

description: Streptomyces capitiformicae strain 1H-SSA4 16S ribosomal RNA gene, partial sequence

description: ASM221418v1 assembly for Streptomyces capitiformicae 1H-SSA4

description: ASM1465385v1 assembly for Streptomyces capitiformicae CGMCC 4.7403


description: domain/bacteria

family: Frankiaceae

full scientific name: Frankia saprophytica Nouioui et al. 2018

genus: Frankia

order: Frankiales

species: Frankia saprophytica

synonym: Pseudofrankia saprophytica

description: Pseudofrankia saprophytica strain CN3 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Glycomycetaceae

full scientific name: Glycomyces anabasis Zhang et al. 2018

genus: Glycomyces

order: Glycomycetales

species: Glycomyces anabasis

description: Glycomyces anabasis strain EGI 6500139 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Glycomyces paridis Fang et al. 2018

species: Glycomyces paridis

description: Glycomyces paridis strain CPCC204354 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Glycomyces paridis strain CPCC204355 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Glycomyces paridis strain CPCC204357 16S ribosomal RNA gene, partial sequence

description: ASM491215v1 assembly for Glycomyces paridis CPCC 204357


description: domain/bacteria

full scientific name: Glycomyces sediminimaris Mohammadipanah et al. 2018

species: Glycomyces sediminimaris

description: Glycomyces sediminimaris 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Streptosporangiaceae

full scientific name: Sphaerisporangium rhizosphaerae Mu et al. 2018

genus: Sphaerisporangium

order: Streptosporangiales

species: Sphaerisporangium rhizosphaerae

description: Sphaerisporangium rhizosphaerae strain NEAU-mq3 16S ribosomal RNA gene, partial sequence

description: ASM4266515v1 assembly for Sphaerisporangium rhizosphaerae CGMCC 4.7429


description: domain/bacteria

full scientific name: Glycomyces dulcitolivorans Mu et al. 2018

species: Glycomyces dulcitolivorans

description: Glycomyces dulcitolivorans strain SJ-25 16S ribosomal RNA gene, partial sequence

description: ASM326535v1 assembly for Glycomyces dulcitolivorans SJ-25


description: domain/bacteria

full scientific name: Frankia canadensis Normand et al. 2018

species: Frankia canadensis

strain designation: ARgP5AG, ARgP5

description: Frankia sp. (strain argp5) 16S ribosomal RNA (16S rRNA) gene


description: domain/bacteria

full scientific name: Frankia irregularis Nouioui et al. 2018

species: Frankia irregularis

synonym: Parafrankia irregularis

description: Parafrankia irregularis strain G2 16S ribosomal RNA gene, partial sequence

description: IMG-taxon 2634166352 annotated assembly for Parafrankia irregularis DSM 45899


description: domain/bacteria

family: Thermomonosporaceae

full scientific name: Actinomadura barringtoniae Rachniyom et al. 2018

genus: Actinomadura

species: Actinomadura barringtoniae

description: Actinomadura sp. GKU 128 16S ribosomal RNA gene, partial sequence

description: ASM1757350v1 assembly for Actinomadura barringtoniae GKU 128


description: domain/bacteria

full scientific name: Actinomadura rhizosphaerae Malisorn et al. 2018

species: Actinomadura rhizosphaerae

description: Actinomadura rhizosphaerae SDA37 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

family: Micromonosporaceae

full scientific name: Micromonospora azadirachtae Kuncharoen et al. 2019

genus: Micromonospora

order: Micromonosporales

species: Micromonospora azadirachtae

description: Micromonospora azadirachtae AZ1-19 gene for 16S ribosomal RNA, partial

description: ASM4267664v1 assembly for Micromonospora azadirachtae JCM 32148


description: domain/bacteria

family: Anaerovoracaceae

full scientific name: Aminipila butyrica Ueki et al. 2018

genus: Aminipila

species: Aminipila butyrica

family: Eubacteriales, not assigned to family

description: Aminipila butyrica gene for 16S rRNA, partial sequence

description: ASM1066930v1 assembly for Aminipila butyrica DSM 103574


description: domain/bacteria

family: Carnobacteriaceae

full scientific name: Trichococcus paludicola Dai et al. 2018

genus: Trichococcus

order: Lactobacillales

species: Trichococcus paludicola

description: Trichococcus paludicola strain B7-2 16S ribosomal RNA gene, partial sequence

description: ASM305229v1 assembly for Trichococcus paludicola B7-2


description: domain/bacteria

full scientific name: Trichococcus alkaliphilus Dai et al. 2018

species: Trichococcus alkaliphilus

description: Trichococcus alkaliphilus strain B5 16S ribosomal RNA gene, partial sequence

description: ASM300869v1 assembly for Trichococcus alkaliphilus B5


description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: Bifidobacterium callitrichidarum Modesto et al. 2018

genus: Bifidobacterium

order: Bifidobacteriales

species: Bifidobacterium callitrichidarum

description: Bifidobacterium callitrichidarum strain TRI 5 16S ribosomal RNA gene, partial sequence

description: ASM312990v1 assembly for Bifidobacterium callitrichidarum TRI 5


description: domain/bacteria

family: Bacillaceae

full scientific name: Alteribacter populi (Liu et al. 2018) Gupta et al. 2020

genus: Alteribacter

order: Caryophanales

species: Alteribacter populi

synonym: Bacillus populi

order: Bacillales

description: Alteribacter populi strain FJAT-45347 16S ribosomal RNA gene, partial sequence

description: ASM235276v2 assembly for Alteribacter populi FJAT-45347


description: domain/bacteria

family: Microbacteriaceae

full scientific name: Leucobacter triazinivorans Sun et al. 2018

genus: Leucobacter

order: Micrococcales

species: Leucobacter triazinivorans

description: Leucobacter triazinivorans strain JW-1 16S ribosomal RNA gene, partial sequence

description: ASM420863v1 assembly for Leucobacter triazinivorans JW-1


description: domain/bacteria

full scientific name: Microbacterium album Yang et al. 2018

genus: Microbacterium

species: Microbacterium album

description: Microbacterium album strain SYSU D8007 16S ribosomal RNA gene, partial sequence

description: ASM1464369v1 assembly for Microbacterium album CGMCC 1.15794


description: domain/bacteria

family: Halomonadaceae

full scientific name: Halomonas nigrificans Oguntoyinbo et al. 2018

genus: Halomonas

order: Oceanospirillales

species: Halomonas nigrificans

synonym: Vreelandella nigrificans

description: Halomonas nigrificans strain MBT G8648 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Streptomyces davaonensis Landwehr et al. 2018

species: Streptomyces davaonensis

description: Streptomyces davawensis strain JCM 4913 16S ribosomal RNA gene, partial sequence.

description: ASM34932v1 assembly for Streptomyces davaonensis JCM 4913


description: domain/bacteria

full scientific name: Streptomyces cinnabarigriseus Landwehr et al. 2018

species: Streptomyces cinnabarigriseus

description: Streptomyces cinnabarigriseus strain JS360 16S ribosomal RNA gene, partial sequence

description: Streptomyces cinnabarigriseus JS360


description: domain/bacteria

full scientific name: Bifidobacterium catulorum Modesto et al. 2018

species: Bifidobacterium catulorum

description: Bifidobacterium catulorum strain MRM 8.19 16S ribosomal RNA gene, partial sequence

description: ASM312992v1 assembly for Bifidobacterium catulorum MRM 8.19


description: domain/bacteria

family: Streptococcaceae

full scientific name: Lactococcus reticulitermitis Yuki et al. 2018

genus: Lactococcus

species: Lactococcus reticulitermitis

synonym: Pseudolactococcus reticulitermitis

description: ASM226084v1 assembly for Pseudolactococcus reticulitermitis Rs-Y01


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Xylanibacillus composti Kukolya et al. 2018

genus: Xylanibacillus

species: Xylanibacillus composti

description: Xylanibacillus composti strain K13 sequence

description: ASM1840368v1 assembly for Xylanibacillus composti K13


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lactobacillus panisapium Wang et al. 2018

genus: Lactobacillus

species: Lactobacillus panisapium

description: Lactobacillus panisapium strain Bb 2-3 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Listeriaceae

full scientific name: Listeria costaricensis Núñez-Montero et al. 2018

genus: Listeria

species: Listeria costaricensis

synonym: Mesolisteria costaricensis

description: Listeria costaricensis strain CLIP 2016/00682 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Micrococcaceae

full scientific name: Rothia uropygialis (Braun et al. 2018) Ghodhbane-Gtari et al. 2024

genus: Rothia

species: Rothia uropygialis

synonym: Kocuria uropygialis

full scientific name: Kocuria uropygialis Braun et al. 2018

genus: Kocuria

species: Kocuria uropygialis

strain designation: Isolate 36

description: Kocuria uropygialis strain 36 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Rothia uropygioeca (Braun et al. 2018) Ghodhbane-Gtari et al. 2024

species: Rothia uropygioeca

synonym: Kocuria uropygioeca

full scientific name: Kocuria uropygioeca Braun et al. 2018

species: Kocuria uropygioeca

description: Kocuria uropygioeca strain 257 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Peptoniphilaceae

full scientific name: Peptoniphilus lacydonensis Beye et al. 2018

genus: Peptoniphilus

order: Tissierellales

species: Peptoniphilus lacydonensis

synonym: Peptoniphilus rhinitidis

order: Clostridiales

strain designation: ED1, EL1

description: Peptoniphilus sp. EL1 partial 16S rRNA gene, strain EL1

description: PRJEB16530 assembly for Peptoniphilus lacydonensis EL1


description: domain/bacteria

full scientific name: Marinicrinis lubricantis Kämpfer et al. 2018

genus: Marinicrinis

species: Marinicrinis lubricantis

description: Marinicrinis lubricantis strain KSS164-79 16S ribosomal RNA gene, partial sequence

description: ASM4265866v1 assembly for Marinicrinis lubricantis CCM 8749


description: domain/bacteria

family: Allobogoriellaceae

full scientific name: Georgenia deserti Hozzein et al. 2018

genus: Georgenia

species: Georgenia deserti

family: Bogoriellaceae

description: Georgenia deserti strain SYSU D8004 16S ribosomal RNA gene, partial sequence

description: ASM4268060v1 assembly for Georgenia deserti CGMCC 1.15793


class: Coriobacteriia

description: domain/bacteria

family: Atopobiaceae

full scientific name: Parolsenella catena Sakamoto et al. 2018

genus: Parolsenella

order: Coriobacteriales

species: Parolsenella catena

strain designation: 2CBE6H3, 2CBEGH3

description: Parolsenella catena gene for 16S ribosomal RNA, partial sequence

description: ASM396695v1 assembly for Parolsenella catena JCM 31932


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium gottingense Atasayar et al. 2017

genus: Corynebacterium

order: Mycobacteriales

species: Corynebacterium gottingense

synonym: Corynebacterium godavarianum

synonym: Corynebacterium hadale

order: Burkholderiales

description: Corynebacterium hadale 16S ribosomal RNA gene, partial sequence

description: ASM3044030v1 assembly for Corynebacterium hadale DSM 105365

description: ASM227300v1 assembly for Corynebacterium hadale NBT06-6


culture collection no.: DSM 104101, ATCC TSD-78

description: domain/bacteria

full scientific name: Rathayibacter agropyri Schroeder et al. 2018

genus: Rathayibacter

species: Rathayibacter agropyri

full scientific name: Rathayibacter agropyri (non O'Gara 1916) Schroeder et al. 2018

order: Actinomycetales

description: Rathayibacter sp. CA4 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Eggerthellaceae

full scientific name: Rubneribacter badeniensis Danylec et al. 2018

genus: Rubneribacter

order: Eggerthellales

species: Rubneribacter badeniensis

description: Rubneribacter badeniensis strain ResAG-85 16S ribosomal RNA gene, partial sequence

description: ASM289969v1 assembly for Rubneribacter badeniensis ResAG-85


description: domain/bacteria

full scientific name: Enteroscipio rubneri Danylec et al. 2018

genus: Enteroscipio

species: Enteroscipio rubneri

description: Enteroscipio rubneri strain ResAG-96 16S ribosomal RNA gene, partial sequence

description: ASM289971v1 assembly for Enteroscipio rubneri ResAG-96


class: Bacilli

description: domain/bacteria

full scientific name: Carnobacterium antarcticum Zhu et al. 2018

genus: Carnobacterium

species: Carnobacterium antarcticum

description: Carnobacterium antarcticum strain CP1 16S ribosomal RNA gene, partial sequence

description: ASM4265836v1 assembly for Carnobacterium antarcticum CGMCC 1.15643

description: ASM4268116v1 assembly for Carnobacterium antarcticum CGMCC 1.15643


description: domain/bacteria

full scientific name: Ellagibacter isourolithinifaciens Beltrán et al. 2018

genus: Ellagibacter

species: Ellagibacter isourolithinifaciens

description: Ellagibacter isourolithinifaciens strain CEBAS 4A 16S ribosomal RNA gene, partial sequence

description: ASM883103v1 assembly for Ellagibacter isourolithinifaciens DSM 104140


class: Betaproteobacteria

description: domain/bacteria

family: Burkholderiaceae

full scientific name: Polynucleobacter campilacus Hahn et al. 2018

genus: Polynucleobacter

species: Polynucleobacter campilacus

description: Polynucleobacter campilacus strain MWH-Feld-100 16S ribosomal RNA gene, partial sequence

description: ASM220662v1 assembly for Polynucleobacter campilacus MWH-Feld-100


description: domain/bacteria

full scientific name: Polynucleobacter hirudinilacicola Hahn et al. 2018

species: Polynucleobacter hirudinilacicola

description: Polynucleobacter necessarius subsp. asymbioticus partial 16S rRNA gene and ITS1, strain MWH-EgelM1-30-B4

description: ASM219253v1 assembly for Polynucleobacter hirudinilacicola MWH-EgelM1-30-B4


description: domain/bacteria

full scientific name: Paenibacillus elymi Hwang et al. 2018

genus: Paenibacillus

species: Paenibacillus elymi

description: Paenibacillus elymi strain KUDC6143 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Oxalobacteraceae

full scientific name: Collimonas antrihumi Lee 2018

genus: Collimonas

species: Collimonas antrihumi

description: Collimonas sp. C3-17 partial 16S rRNA gene, strain C3-17

description: ASM1830496v1 assembly for Collimonas antrihumi DSM 104040


Matching level: subspecies

class: Gammaproteobacteria

description: domain/bacteria

family: Morganellaceae

full scientific name: Photorhabdus laumondii subsp. clarkei Machado et al. 2018

genus: Photorhabdus

order: Enterobacterales

species: Photorhabdus laumondii subsp. clarkei

order: Enterobacteriales, not validated

description: ASM328757v1 assembly for Photorhabdus laumondii subsp. clarkei BOJ-47


description: domain/bacteria

full scientific name: Photorhabdus bodei Machado et al. 2018

species: Photorhabdus bodei

description: Photorhabdus bodei strain LJ24-63 16S ribosomal RNA gene, partial sequence

description: ASM328773v1 assembly for Photorhabdus bodei LJ24-63


description: domain/bacteria

full scientific name: Apilactobacillus quenuiae (McFrederick et al. 2018) Zheng et al. 2020

genus: Apilactobacillus

species: Apilactobacillus quenuiae

synonym: Lactobacillus quenuiae

description: Apilactobacillus quenuiae strain HV_6 16S ribosomal RNA gene, partial sequence

description: ASM299400v1 assembly for Apilactobacillus quenuiae HV_6


description: domain/bacteria

full scientific name: Apilactobacillus timberlakei (McFrederick et al. 2018) Zheng et al. 2020

species: Apilactobacillus timberlakei

synonym: Lactobacillus timberlakei

description: Apilactobacillus timberlakei strain HV_12 16S ribosomal RNA gene, partial sequence

description: ASM299396v1 assembly for Apilactobacillus timberlakei HV_12


description: domain/bacteria

full scientific name: Apilactobacillus micheneri (McFrederick et al. 2018) Zheng et al. 2020

species: Apilactobacillus micheneri

synonym: Apilactobacillus kosoi

synonym: Lactobacillus micheneri

synonym: Lactobacillus kosoi

description: Apilactobacillus micheneri strain Hlig3 16S ribosomal RNA gene, partial sequence

description: ASM299397v1 assembly for Apilactobacillus micheneri Hlig3


description: domain/bacteria

full scientific name: Streptococcus respiraculi Niu et al. 2018

genus: Streptococcus

species: Streptococcus respiraculi

description: Streptococcus respiraculi strain HTS25 16S ribosomal RNA gene, partial sequence

description: ASM359552v1 assembly for Streptococcus respiraculi HTS25


description: domain/bacteria

full scientific name: Cohnella kolymensis Kudryashova et al. 2018

genus: Cohnella

species: Cohnella kolymensis

description: Paenibacillaceae bacterium VKM B-2846 16S ribosomal RNA gene, partial sequence

description: ASM82946v1 assembly for Cohnella kolymensis VKM B-2846


description: domain/bacteria

family: Bacillaceae

full scientific name: Peribacillus acanthi (Ma et al. 2018) Patel and Gupta 2020

genus: Peribacillus

species: Peribacillus acanthi

synonym: Bacillus acanthi

description: Peribacillus acanthi strain L28 16S ribosomal RNA gene, partial sequence

description: ASM307317v1 assembly for Peribacillus acanthi L28


culture collection no.: DSM 103122, Marseille-P2951

description: domain/bacteria

full scientific name: Ezakiella massiliensis Diop et al. 2018

genus: Ezakiella

species: Ezakiella massiliensis

order: Clostridia, not assigned to order

description: Ezakiella sp. Marseille-P2951 partial 16S rRNA gene, strain Marseille-P2951

description: PRJEB15652 assembly for Ezakiella massiliensis Marseille-P2951


description: domain/bacteria

family: Propionibacteriaceae

full scientific name: Arachnia rubra (Saito et al. 2018) Tindall 2019

genus: Arachnia

order: Propionibacteriales

species: Arachnia rubra

synonym: Pseudopropionibacterium rubrum

description: Pseudopropionibacterium rubrum gene for 16S ribosomal RNA, partial sequence

description: ASM1997373v1 assembly for Arachnia rubra SK-1


class: Cytophagia

description: domain/bacteria

family: Spirosomataceae

full scientific name: Spirosoma pollinicola Ambika Manirajan et al. 2018

genus: Spirosoma

order: Cytophagales

species: Spirosoma pollinicola

family: Spirosomaceae

description: Spirosoma sp. strain HA7 16S ribosomal RNA gene, partial sequence

description: ASM283156v1 assembly for Spirosoma pollinicola Ha7


description: domain/bacteria

full scientific name: Aestuariimicrobium soli Chen et al. 2018

genus: Aestuariimicrobium

species: Aestuariimicrobium soli

description: Aestuariimicrobium soli strain D6 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Acidipropionibacterium virtanenii Deptula et al. 2018

genus: Acidipropionibacterium

species: Acidipropionibacterium virtanenii

description: Acidipropionibacterium virtanenii strain JS278 16S ribosomal RNA gene, partial sequence

description: ASM332545v1 assembly for Acidipropionibacterium virtanenii JS278


description: domain/bacteria

full scientific name: Listeria goaensis Doijad et al. 2018

genus: Listeria

species: Listeria goaensis

synonym: Mesolisteria goaensis

description: Listeria goaensis strain ILCC801 16S ribosomal RNA gene, partial sequence

description: ILCC801.fasta assembly for Listeria goaensis ILCC801


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces durbertensis Yu et al. 2018

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces durbertensis

description: Streptomyces durbertensis strain NEAU-S1GS20 16S ribosomal RNA gene, partial sequence

description: ASM1415669v1 assembly for Streptomyces durbertensis DSM 104538

description: Streptomyces durbertensis strain DSM 104538


class: Acidimicrobiia

description: domain/bacteria

family: Ilumatobacteraceae

full scientific name: Desertimonas flava Asem et al. 2018

genus: Desertimonas

order: Acidimicrobiales

species: Desertimonas flava

description: Desertimonas flava 16S ribosomal RNA gene, partial sequence

description: ASM342681v1 assembly for Desertimonas flava SYSU D60003


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium decipiens Brown-Elliott et al. 2018

genus: Mycobacterium

species: Mycobacterium decipiens

description: Mycobacterium sp. TBL 1200985 16S ribosomal RNA gene, partial sequence

description: ASM210467v1 assembly for Mycobacterium decipiens TBL 1200985

description: MdecATCCTSD117v1 assembly for Mycobacterium decipiens ATCC TSD-117


class: Rubrobacteria

description: domain/bacteria

family: Rubrobacteraceae

full scientific name: Rubrobacter indicoceani Chen et al. 2018

genus: Rubrobacter

order: Rubrobacterales

species: Rubrobacter indicoceani

description: Rubrobacter indicoceani strain SCSIO 08198 16S ribosomal RNA gene, partial sequence

description: ASM356886v1 assembly for Rubrobacter indicoceani SCSIO 08198


description: domain/bacteria

family: Eubacteriaceae

full scientific name: Eubacterium maltosivorans Feng et al. 2018

genus: Eubacterium

order: Eubacteriales

species: Eubacterium maltosivorans

strain designation: YI

description: Eubacterium maltosivorans strain YI 16S ribosomal RNA gene, partial sequence

description: ASM244185v2 assembly for Eubacterium maltosivorans YI


class: Negativicutes

description: domain/bacteria

family: Veillonellaceae

full scientific name: Megasphaera stantonii Maki and Looft 2018

genus: Megasphaera

order: Veillonellales

species: Megasphaera stantonii

synonym: Megasphaera butyrica

order: Selenomonadales

description: Megasphaera stantonii strain AJH120 16S ribosomal RNA gene, partial sequence

description: ASM336790v1 assembly for Megasphaera stantonii AJH120

description: ASM303044v1 assembly for Megasphaera stantonii AJH120


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus cornubiensis Murray et al. 2018

genus: Staphylococcus

order: Caryophanales

species: Staphylococcus cornubiensis

order: Bacillales

description: SAMEA104055222 assembly for Staphylococcus cornubiensis NW1


description: domain/bacteria

family: Kribbellaceae

full scientific name: Kribbella monticola Song et al. 2018

genus: Kribbella

species: Kribbella monticola

description: Kribbella monticola 16S ribosomal RNA gene, partial sequence

description: ASM326163v1 assembly for Kribbella monticola NEAU-SW521


description: domain/bacteria

family: Microbacteriaceae

full scientific name: Subtercola vilae Villalobos et al. 2018

genus: Subtercola

order: Micrococcales

species: Subtercola vilae

description: Subtercola vilae strain DB165 16S ribosomal RNA gene, partial sequence

description: ASM492325v1 assembly for Subtercola vilae DB165


description: domain/bacteria

family: Vibrionaceae

full scientific name: Vibrio coralliirubri Poli et al. 2018

genus: Vibrio

order: Vibrionales

species: Vibrio coralliirubri

order: Vibrionales, not validated

description: Vibrio sp. CIP 110630 partial 16S rRNA gene, strain CIP 110630

description: ASM215645v1 assembly for Vibrio coralliirubri Corallo1

description: ASM2434737v1 assembly for Vibrio coralliirubri DSM 27495


description: domain/bacteria

family: Streptococcaceae

full scientific name: Lactococcus termiticola Noda et al. 2018

genus: Lactococcus

order: Lactobacillales

species: Lactococcus termiticola

description: Lactococcus termiticola NtB2 gene for 16S ribosomal RNA, partial sequence

description: ASM311683v1 assembly for Lactococcus termiticola NtB2


class: Alphaproteobacteria

description: domain/bacteria

family: Rhodospirillaceae

full scientific name: Indioceanicola profundi Chen et al. 2018

genus: Indioceanicola

order: Rhodospirillales

species: Indioceanicola profundi

description: Indioceanicola profundi strain SCSIO 08040 16S ribosomal RNA gene, partial sequence

description: ASM356884v1 assembly for Indioceanicola profundi SCSIO 08040


class: Bacteroidia

description: domain/bacteria

family: Prevotellaceae

full scientific name: Prevotella rara Efimov et al. 2018

genus: Prevotella

order: Bacteroidales

species: Prevotella rara

synonym: Xylanibacter rarus

synonym: Xylanibacter rara

full scientific name: Xylanibacter rarus (Efimov et al. 2018) Hitch et al. 2023

genus: Xylanibacter

species: Xylanibacter rarus

description: Xylanibacter rarus strain 109 16S ribosomal RNA gene, partial sequence

description: ASM127513v1 assembly for Xylanibacter rarus 109


description: domain/bacteria

family: Actinomycetaceae

full scientific name: Boudabousia tangfeifanii (Meng et al. 2018) Yang et al. 2021

genus: Boudabousia

order: Actinomycetales

species: Boudabousia tangfeifanii

synonym: Actinomyces tangfeifanii

description: Boudabousia tangfeifanii 16S ribosomal RNA gene, partial sequence

description: ASM185668v1 assembly for Boudabousia tangfeifanii VUL4_3


description: domain/bacteria

family: Alicyclobacillaceae

full scientific name: Kyrpidia spormannii Reiner et al. 2018

genus: Kyrpidia

species: Kyrpidia spormannii

description: ASM280406v1 assembly for Kyrpidia spormannii EA-1


description: domain/bacteria

family: Micrococcaceae

full scientific name: Arthrobacter silvisoli Yan et al. 2018

genus: Arthrobacter

species: Arthrobacter silvisoli

description: Arthrobacter silvisoli strain NEAU-SA1 16S ribosomal RNA gene, partial sequence

description: ASM336944v1 assembly for Arthrobacter silvisoli NEAU-SA1


culture collection no.: DSM 105112, ATCC TSD-89

description: domain/bacteria

full scientific name: Mycobacterium syngnathidarum Fogelson et al. 2018

order: Mycobacteriales

species: Mycobacterium syngnathidarum

description: Mycobacterium syngnathidarum strain 27335 16S ribosomal RNA gene, partial sequence

description: Mycobacterium sp. 27335 16S ribosomal RNA gene, complete sequence.

description: Mycobacterium syngnathidarum strain 27335 NODE_66_length_1543_cov_54.1773, whole genome shotgun sequence

description: ASM194262v1 assembly for Mycobacterium syngnathidarum 27335


description: domain/bacteria

family: Sutterellaceae

full scientific name: Sutterella megalosphaeroides Sakamoto et al. 2018

genus: Sutterella

order: Burkholderiales

species: Sutterella megalosphaeroides

description: Sutterella megalosphaeroides 6FBBBH3 gene for 16S ribosomal RNA, partial sequence

description: ASM360999v1 assembly for Sutterella megalosphaeroides 6FBBBH3


description: domain/bacteria

full scientific name: Mesosutterella multiformis Sakamoto et al. 2018

genus: Mesosutterella

species: Mesosutterella multiformis

description: Mesosutterella multiformis 4NBBH2 gene for 16S ribosomal RNA, partial sequence

description: ASM340257v1 assembly for Mesosutterella multiformis 4NBBH2


description: domain/bacteria

full scientific name: Microbacterium halophytorum Li et al. 2018

genus: Microbacterium

species: Microbacterium halophytorum

description: Microbacterium halophytorum 16S ribosomal RNA gene, partial sequence

description: ASM297097v1 assembly for Microbacterium halophytorum YJYP 303


description: domain/bacteria

description: Microbacterium halophytorum strain YZYP 518 16S ribosomal RNA gene, partial sequence

description: ASM297095v1 assembly for Microbacterium halophytorum YZYP 518


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium belfantii Dazas et al. 2018

genus: Corynebacterium

species: Corynebacterium belfantii

description: Corynebacterium diphtheriae partial 16S rRNA gene, strain FRC0043


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: Amycolatopsis cappadoca I??k et al. 2019

genus: Amycolatopsis

order: Pseudonocardiales

species: Amycolatopsis cappadoca

description: Amycolatopsis cappadoca strain AG28 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Prevotella phocaeensis Afouda et al. 2019

species: Prevotella phocaeensis

description: Prevotella sp. SN19 partial 16S rRNA gene, strain SN19


class: Clostridia

description: domain/bacteria

family: Oscillospiraceae

full scientific name: Tepidibaculum saccharolyticum Slobodkina et al. 2019

genus: Tepidibaculum

species: Tepidibaculum saccharolyticum

description: Tepidibaculum saccharolyticum 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Polynucleobacter paneuropaeus Hoetzinger et al. 2019

genus: Polynucleobacter

species: Polynucleobacter paneuropaeus

description: Polynucleobacter paneuropaeus strain FUKU-NW11 16S ribosomal RNA gene, partial sequence

description: ASM328954v1 assembly for Polynucleobacter paneuropaeus FUKU-NW11


description: domain/bacteria

description: Polynucleobacter paneuropaeus strain MG-25-Pas1-D2 16S ribosomal RNA gene, partial sequence

description: ASM326123v1 assembly for Polynucleobacter paneuropaeus MG-25-Pas1-D2


description: domain/bacteria

description: Polynucleobacter paneuropaeus strain MWH-CNW20-3 16S ribosomal RNA gene, partial sequence

description: ASM326127v1 assembly for Polynucleobacter paneuropaeus MWH-CNW20-3


description: domain/bacteria

description: Polynucleobacter necessarius subsp. asymbioticus partial 16S rRNA gene and ITS1, strain MWH-Creno-4B4

description: ASM326129v1 assembly for Polynucleobacter paneuropaeus MWH-Creno-4B4


description: domain/bacteria

family: Listeriaceae

full scientific name: Listeria thailandensis Leclercq et al. 2019

genus: Listeria

species: Listeria thailandensis

synonym: Mesolisteria thailandensis

description: Listeria thailandensis strain CLIP 2015/00305 16S ribosomal RNA gene, partial sequence

description: CLIP201500305T assembly for Listeria thailandensis


class: Armatimonadia

description: domain/bacteria

family: Capsulimonadaceae

full scientific name: Capsulimonas corticalis Li et al. 2019

genus: Capsulimonas

keyword: phylum/armatimonadota

order: Capsulimonadales

phylum: Armatimonadota

species: Capsulimonas corticalis

phylum: Armatimonadetes

description: Capsulimonas corticalis gene for 16S ribosomal RNA, partial sequence, strain: AX-7

description: ASM357431v2 assembly for Capsulimonas corticalis AX-7

description: Capsulimonas corticalis AX-7


description: domain/bacteria

family: Caulobacteraceae

full scientific name: Aquidulcibacter paucihalophilus Cai et al. 2018

genus: Aquidulcibacter

order: Caulobacterales

species: Aquidulcibacter paucihalophilus

description: Aquidulcibacter paucihalophilus strain TH1-2 16S ribosomal RNA gene, partial sequence

description: ASM210546v1 assembly for Aquidulcibacter paucihalophilus TH1-2


class: Cyanobacteria, not assigned to class

family: Cyanobacteria, not assigned to family

full scientific name: Cyanobacteria sp.

genus: Cyanobacteria

order: Not assigned to order

species: Cyanobacteria sp.


description: domain/bacteria

family: Barnesiellaceae

full scientific name: Barnesiella propionica Hitch et al. 2022

genus: Barnesiella

species: Barnesiella propionica

description: ASM2556704v1 assembly for Barnesiella propionica E21


description: domain/bacteria

family: Micromonosporaceae

full scientific name: Micromonospora craniellae Li et al. 2019

genus: Micromonospora

order: Micromonosporales

phylum: Actinomycetota

species: Micromonospora craniellae

phylum: Actinobacteria

description: Micromonospora craniellae strain LHW63014 16S ribosomal RNA gene, partial sequence

description: ASM1476440v1 assembly for Micromonospora craniellae LHW63014

description: ASM341994v1 assembly for Micromonospora craniellae LHW63014


class: Nitrospira

family: Nitrospiraceae

full scientific name: Candidatus Nitrospira inopinata

genus: Candidatus Nitrospira

order: Nitrospirales

phylum: Nitrospirae

species: Candidatus Nitrospira inopinata

description: NiCh1 assembly for Candidatus Nitrospira inopinata


description: domain/bacteria

family: Clostridiaceae

full scientific name: Clostridium ammoniilyticum Hitch et al. 2022

genus: Clostridium

order: Eubacteriales

species: Clostridium ammoniilyticum

class: Erysipelotrichia

family: Erysipelotrichaceae

full scientific name: Clostridium ammoniilyticum

order: Erysipelotrichales


class: Actinomycetes

description: domain/bacteria

full scientific name: Actinomycetospora callitridis Kaewkla and Franco 2019

genus: Actinomycetospora

species: Actinomycetospora callitridis

description: Actinomycetospora callitridis 16S ribosomal RNA gene, partial sequence.

description: ASM2873726v1 assembly for Actinomycetospora callitridis DSM 101857


description: domain/bacteria

full scientific name: Muriventricola aceti Hitch et al. 2022

genus: Muriventricola

species: Muriventricola aceti


description: domain/bacteria

description: ASM2556756v1 assembly for Muriventricola aceti H5_61


description: domain/bacteria

full scientific name: Prauserella flavalba Li et al. 2020

genus: Prauserella

species: Prauserella flavalba

class: Actinobacteria

full scientific name: Prauserella flavalba Li et al. 2019

description: Prauserella sp. YIM 121212 16S ribosomal RNA gene, partial sequence

description: ASM320223v1 assembly for Prauserella flavalba YIM 121212


description: domain/bacteria

full scientific name: <I>Prauserella</I> Kim and Goodfellow 1999

species: Prauserella sp.

full scientific name: Prauserella sp.

description: Prauserella sp. PE36 16S ribosomal RNA gene, partial sequence

description: ASM331165v1 assembly for Prauserella sp. PE36


description: domain/bacteria

full scientific name: Kocuria tytonis Braun et al. 2019

genus: Kocuria

order: Micrococcales

species: Kocuria tytonis

description: Kocuria tytonis 16S ribosomal RNA gene, partial sequence

description: ASM322689v2 assembly for Kocuria tytonis 442

description: Kocuria sp. 442


description: domain/bacteria

family: Microbacteriaceae

full scientific name: Microbacterium ureisolvens Cheng et al. 2019

genus: Microbacterium

species: Microbacterium ureisolvens

description: Microbacterium ureisolvens 16S ribosomal RNA gene, partial sequence

description: ASM312130v1 assembly for Microbacterium sp. KCTC 39802

description: ASM1527831v1 assembly for Microbacterium ureisolvens CFH S00084


description: domain/bacteria

family: Carnobacteriaceae

full scientific name: Trichococcus shcherbakoviae Parshina et al. 2019

genus: Trichococcus

species: Trichococcus shcherbakoviae

strain designation: Art 1

description: Trichococcus sp. ART1 partial 16S rRNA gene, strain ART1, isolate ART1


description: domain/bacteria

family: Streptosporangiaceae

full scientific name: Spongiactinospora rosea Li et al. 2019

genus: Spongiactinospora

order: Streptosporangiales

species: Spongiactinospora rosea

description: Spongiactinospora rosea strain LHW63015 16S ribosomal RNA gene, partial sequence

description: ASM331579v1 assembly for Spongiactinospora rosea LHW63015


description: domain/bacteria

family: Bacillaceae

full scientific name: Anaerobacillus alkaliphilus Borsodi et al. 2019

genus: Anaerobacillus

order: Caryophanales

species: Anaerobacillus alkaliphilus

order: Bacillales

description: Bacillus sp. B16-10 partial 16S rRNA gene, strain B16-10

description: ASM411626v1 assembly for Anaerobacillus alkaliphilus B16-10


description: domain/bacteria

description: Bacillus sp. Z23-18 partial 16S rRNA gene, strain Z23-18


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces inhibens Jin et al. 2019

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces inhibens

description: Streptomyces inhibens 16S ribosomal RNA gene, partial sequence

description: ASM338945v1 assembly for Streptomyces inhibens NEAU-D10


description: domain/bacteria

family: Odoribacteraceae

full scientific name: Butyricimonas faecalis Le Roy et al. 2019

genus: Butyricimonas

order: Bacteroidales

species: Butyricimonas faecalis

description: Butyricimonas faecalis strain H184 16S ribosomal RNA gene, partial sequence

description: ASM399156v1 assembly for Butyricimonas faecalis H184


description: domain/bacteria

family: Gammaproteobacteria, not assigned to family

full scientific name: Thiosocius teredinicola Altamia et al. 2019

genus: Thiosocius

order: Gammaproteobacteria, not assigned to order

phylum: Pseudomonadota

species: Thiosocius teredinicola

phylum: Proteobacteria

description: Thiosocius teredinicola strain PMS-2141T.STBD.0c.01a 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Actinoplanes deserti Habib et al. 2019

genus: Actinoplanes

species: Actinoplanes deserti

synonym: Paractinoplanes deserti

order: Actinomycetales

description: Actinoplanes deserti strain YIM CF22 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Aliibacillus thermotolerans Xu et al. 2019

genus: Aliibacillus

phylum: Bacillota

species: Aliibacillus thermotolerans

description: Aliibacillus thermotolerans strain BM62 16S ribosomal RNA gene, partial sequence

description: ASM2785323v1 assembly for Aliibacillus thermotolerans BM62

description: ASM4265654v1 assembly for Aliibacillus thermotolerans CGMCC 1.15790


description: domain/bacteria

family: Nocardiaceae

full scientific name: Nocardia zhihengii Huang et al. 2019

genus: Nocardia

order: Mycobacteriales

species: Nocardia zhihengii

description: Nocardia zhihengii strain YIM TG2190 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Thermoactinomycetaceae

full scientific name: Staphylospora marina Wang et al. 2019

genus: Staphylospora

species: Staphylospora marina

phylum: Firmicutes

description: Staphylospora marina strain SCSIO 07575 16S ribosomal RNA gene, partial sequence

description: ASM385649v1 assembly for Staphylospora marina SCSIO 07575


description: domain/bacteria

family: Thermomonosporaceae

full scientific name: Actinomadura craniellae Li et al. 2019

genus: Actinomadura

species: Actinomadura craniellae

description: Actinomadura craniellae 16S ribosomal RNA gene, partial sequence

description: ASM328964v1 assembly for Actinomadura craniellae LHW63021


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: Actinoalloteichus fjordicus Nouioui et al. 2025

genus: Actinoalloteichus

order: Pseudonocardiales

species: Actinoalloteichus fjordicus

full scientific name: Actinoalloteichus fjordicus

description: Actinoalloteichus sp. strain DSM 46855 16S ribosomal RNA gene, partial sequence

description: ASM194162v1 assembly for Actinoalloteichus fjordicus ADI127-7


description: domain/bacteria

description: Actinoalloteichus sp. strain DSM 46856 16S ribosomal RNA gene, partial sequence

description: ASM194164v1 assembly for Actinoalloteichus sp. GBA129-24


class: Terriglobia

description: domain/bacteria

family: Acidobacteriaceae

full scientific name: Granulicella sibirica Oshkin et al. 2019

genus: Granulicella

order: Terriglobales

phylum: Acidobacteriota

species: Granulicella sibirica

class: Acidobacteriia

order: Acidobacteriales

phylum: Acidobacteria

description: Granulicella sibirica strain AF10 16S ribosomal RNA gene, partial sequence

description: ASM411515v1 assembly for Granulicella sibirica AF10


description: domain/bacteria

family: Roseobacteraceae

full scientific name: Profundibacter amoris Le Moine Bauer et al. 2019

genus: Profundibacter

order: Rhodobacterales

species: Profundibacter amoris

family: Rhodobacteraceae

strain designation: BAR1, strain M

description: Profundibacter amoris strain BAR1 16S ribosomal RNA gene, partial sequence

description: ASM354489v1 assembly for Profundibacter amoris BAR1


description: domain/bacteria

family: Jiangellaceae

full scientific name: Jiangella rhizosphaerae Han et al. 2019

genus: Jiangella

order: Jiangellales

species: Jiangella rhizosphaerae

description: Jiangella rhizosphaerae 16S ribosomal RNA gene, partial sequence

description: ASM357992v1 assembly for Jiangella rhizosphaerae NEAU-YY265


class: Desulfovibrionia

description: domain/bacteria

family: Desulfovibrionaceae

full scientific name: Desulfohalovibrio reitneri Spring et al. 2019

genus: Desulfohalovibrio

order: Desulfovibrionales

phylum: Thermodesulfobacteriota

species: Desulfohalovibrio reitneri

class: Deltaproteobacteria

description: Desulfovibrio sp. L21-Syr-AB 16S ribosomal RNA gene, partial sequence

description: ASM71129v1 assembly for Desulfohalovibrio reitneri L21-Syr-AB


class: Nitrososphaeria

description: domain/archaea

family: Nitrosopumilaceae

full scientific name: Nitrosopumilus piranensis Bayer et al. 2019

genus: Nitrosopumilus

keyword: phylum/thermoproteota

order: Nitrosopumilales

phylum: Thermoproteota

species: Nitrosopumilus piranensis

synonym: Nitrosopumilus piranensis

phylum: Thaumarchaeota

description: Nitrosopumilus piranensis strain D3C 16S ribosomal RNA gene, partial sequence

description: ASM87577v1 assembly for Nitrosopumilus piranensis D3C


class: Planctomycetia

description: domain/bacteria

family: Planctomycetaceae

full scientific name: Fuerstiella marisgermanici Kohn et al. 2020

genus: Fuerstiella

order: Planctomycetales

phylum: Planctomycetota

species: Fuerstiella marisgermanici

synonym: Fuerstia marisgermanicae

phylum: Planctomycetes

description: Fuerstiella marisgermanici strain NH11 16S ribosomal RNA gene, partial sequence

description: ASM198393v1 assembly for Fuerstiella marisgermanici NH11


description: domain/bacteria

family: Sporomusaceae

full scientific name: Lucifera butyrica Sánchez-Andrea et al. 2019

genus: Lucifera

order: Selenomonadales

species: Lucifera butyrica

synonym: Allolucifera butyrica

strain designation: ALE

description: Veillonellaceae bacterium ALE partial 16S rRNA gene, strain ALE, clone 3

description: Veillonellaceae bacterium ALE partial 16S rRNA gene, strain ALE, clone 4

description: Lucifera butyrica assembly for Lucifera butyrica


culture collection no.: DSM 103342, CSUR 2666, Marseille-P2666

class: Coriobacteriia

description: domain/bacteria

family: Coriobacteriaceae

full scientific name: Collinsella vaginalis Diop et al. 2019

genus: Collinsella

order: Coriobacteriales

species: Collinsella vaginalis

description: Collinsella sp. Marseille-P2666 partial 16S rRNA gene, strain Marseille-P2666

description: PRJEB20374 assembly for Collinsella vaginalis Marseille-P2666


description: domain/bacteria

family: Beutenbergiaceae

full scientific name: Litorihabitans aurantiacus Hamada et al. 2019

genus: Litorihabitans

order: Micrococcales

species: Litorihabitans aurantiacus

description: Serinibacter sp. HIsM16-52 gene for 16S ribosomal RNA, partial sequence

description: ASM3016159v1 assembly for Litorihabitans aurantiacus NBRC 112290


description: domain/bacteria

family: Microbacteriaceae

full scientific name: Salinibacterium hongtaonis Li et al. 2019

genus: Salinibacterium

species: Salinibacterium hongtaonis

synonym: Homoserinimonas hongtaonis

description: Salinibacterium hongtaonis strain 194 16S ribosomal RNA gene, partial sequence

description: ASM306548v1 assembly for Homoserinimonas hongtaonis CGMCC 1.16371


description: domain/bacteria

full scientific name: Mycetocola zhujimingii Li et al. 2019

genus: Mycetocola

species: Mycetocola zhujimingii

description: Mycetocola zhujimingii strain 449 16S ribosomal RNA gene, partial sequence

description: ASM306542v1 assembly for Mycetocola zhujimingii 449 = CGMCC 1.16372


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Peterkaempfera bronchialis (Nouioui et al. 2019) Madhaiyan et al. 2022

genus: Peterkaempfera

species: Peterkaempfera bronchialis

synonym: Streptacidiphilus bronchialis

full scientific name: Peterkaempfera  bronchialis

description: Streptacidiphilus sp. strain 15-057A 16S ribosomal RNA gene, partial sequence

description: Streptomyces sp. 15-057A 16S ribosomal RNA gene, partial sequence.

description: ASM325860v2 assembly for Peterkaempfera bronchialis DSM 106435

description: Streptacidiphilus sp. DSM 106435


description: domain/bacteria

family: Peptoniphilaceae

full scientific name: Citroniella saccharovorans Patel et al. 2019

genus: Citroniella

order: Tissierellales

species: Citroniella saccharovorans

order: Eubacteriales

description: Citroniella saccharovorans strain M6.X9 16S ribosomal RNA gene, partial sequence

description: ASM3548161v1 assembly for Citroniella saccharovorans DSM 29873

description: ASM4265187v1 assembly for Citroniella saccharovorans CCUG 66799


description: domain/bacteria

full scientific name: Desulfovibrio gilichinskyi Ryzhmanova et al. 2019

genus: Desulfovibrio

species: Desulfovibrio gilichinskyi

synonym: Maridesulfovibrio gilichinskyi

description: Desulfovibrio sp. K3S 16S ribosomal RNA gene, partial sequence

description: IMG-taxon 2708742538 annotated assembly for Desulfovibrio gilichinskyi K3S


class: Methanococci

description: domain/archaea

family: Methanococcaceae

full scientific name: Methanofervidicoccus abyssi Sakai et al. 2019

genus: Methanofervidicoccus

order: Methanococcales

phylum: Methanobacteriota

species: Methanofervidicoccus abyssi

phylum: Euryarchaeota

strain designation: HHB

description: ASM431039v1 assembly for Methanofervidicoccus abyssi HHB


class: Bacilli

description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus chenjunshii Tian et al. 2019

genus: Streptococcus

order: Lactobacillales

species: Streptococcus chenjunshii

description: Streptococcus chenjunshii 16S ribosomal RNA gene, partial sequence

description: ASM308635v2 assembly for Streptococcus chenjunshii Z15


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Ligilactobacillus salitolerans (Tohno et al. 2019) Zheng et al. 2020

genus: Ligilactobacillus

species: Ligilactobacillus salitolerans

synonym: Lactobacillus salitolerans

description: Lactobacillus salitolerans gene for 16S ribosomal RNA, partial sequence

description: ASM386441v1 assembly for Ligilactobacillus salitolerans YK43


description: domain/bacteria

family: Bacillaceae

full scientific name: Bacillus spongiae Lee et al. 2019

genus: Bacillus

order: Caryophanales

species: Bacillus spongiae

order: Bacillales

description: Bacillus spongiae 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Streptosporangiaceae

full scientific name: Spongiactinospora gelatinilytica (Saygin et al. 2019) Ay et al. 2020

genus: Spongiactinospora

order: Streptosporangiales

species: Spongiactinospora gelatinilytica

synonym: Desertactinospora gelatinilytica

synonym: Desertiactinospora gelatinilytica

description: Spongiactinospora gelatinilytica strain 7K107 16S ribosomal RNA gene, partial sequence

description: ASM323638v1 assembly for Spongiactinospora gelatinilytica 7K107


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium basiliense Seth-Smith et al. 2019

genus: Mycobacterium

order: Mycobacteriales

species: Mycobacterium basiliense

order: Actinomycetales

description: MB901379 assembly for Mycobacterium basiliense


description: domain/bacteria

full scientific name: Paraliobacillus zengyii Wang et al. 2019

genus: Paraliobacillus

species: Paraliobacillus zengyii

description: Paraliobacillus zengyii 16S ribosomal RNA gene, partial sequence

description: ASM326859v1 assembly for Paraliobacillus zengyii X-1125


description: domain/bacteria

family: Micrococcaceae

full scientific name: Specibacter cremeus Lee and Schumann 2019

genus: Specibacter

species: Specibacter cremeus

description: Micrococcaceae bacterium C1-50 partial 16S rRNA gene, strain C1-50

description: ASM394688v1 assembly for Specibacter cremeus C1-50


description: domain/bacteria

full scientific name: Halalkalibacter urbisdiaboli (Liu et al. 2019) Joshi et al. 2022

genus: Halalkalibacter

species: Halalkalibacter urbisdiaboli

synonym: Alkalihalobacillus urbisdiaboli

synonym: Bacillus urbisdiaboli

description: Halalkalibacter urbisdiaboli strain FJAT-45385 16S ribosomal RNA gene, partial sequence

description: ASM215638v1 assembly for Halalkalibacter urbisdiaboli FJAT-45385


class: Deinococci

description: domain/bacteria

family: Deinococcaceae

full scientific name: Deinococcus fonticola Makk et al. 2019

genus: Deinococcus

keyword: phylum/deinococcota

order: Deinococcales

phylum: Deinococcota

species: Deinococcus fonticola

phylum: Deinococcus-Thermus

description: Deinococcus sp. partial 16S rRNA gene, strain FeSDHB5-19

description: ASM463421v1 assembly for Deinococcus fonticola FeSDHB5-19


class: Bacteroidia

description: domain/bacteria

family: Prevotellaceae

full scientific name: Prevotella cerevisiae Nakata et al. 2019

genus: Prevotella

order: Bacteroidales

phylum: Bacteroidota

species: Prevotella cerevisiae

synonym: Segatella cerevisiae

class: Not assigned to order

family: Not assigned to family

full scientific name: Segatella cerevisiae (Nakata et al. 2019) Hitch et al. 2023

genus: Segatella

order: Not assigned to order

phylum: Not assigned to order

species: Segatella cerevisiae

description: Prevotella cerevisiae JCM 30867 gene for 16S rRNA, partial sequence

description: ASM2405455v1 assembly for Segatella cerevisiae DSM 100619


description: domain/bacteria

full scientific name: Leucobacter muris Benga et al. 2019

genus: Leucobacter

phylum: Actinomycetota

species: Leucobacter muris

phylum: Actinobacteria

description: Leucobacter sp. DSM 101948 partial 16S rRNA gene, strain DSM101948, clone 924/12

description: Leucobacter sp. DSM 101948 partial 16S rRNA gene, strain DSM101948, isolate 924/12

description: ASM402823v1 assembly for Leucobacter muris DSM 101948


description: domain/bacteria

full scientific name: Bailinhaonella thermotolerans Feng et al. 2019

genus: Bailinhaonella

species: Bailinhaonella thermotolerans

description: Bailinhaonella thermotolerans strain YIM 75507 16S ribosomal RNA gene, partial sequence

description: ASM359487v1 assembly for Bailinhaonella thermotolerans YIM 75507


class: Negativicutes

description: domain/bacteria

family: Acidaminococcaceae

full scientific name: Phascolarctobacterium wakonense Shigeno et al. 2019

genus: Phascolarctobacterium

order: Acidaminococcales

phylum: Bacillota

species: Phascolarctobacterium wakonense

description: Phascolarctobacterium wakonense MB11 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

phylum: Firmicutes

description: Phascolarctobacterium wakonense MB56 gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: Bifidobacterium aemilianum Alberoni et al. 2019

genus: Bifidobacterium

order: Bifidobacteriales

species: Bifidobacterium aemilianum

description: Bifidobacterium aemilianum strain XV10 16S ribosomal RNA gene, partial sequence

description: ASM331563v1 assembly for Bifidobacterium aemilianum XV10


description: domain/bacteria


description: domain/bacteria

full scientific name: Bifidobacterium xylocopae Alberoni et al. 2019

species: Bifidobacterium xylocopae

description: Bifidobacterium xylocopae strain XV2 16S ribosomal RNA gene, partial sequence

description: ASM331561v1 assembly for Bifidobacterium xylocopae XV2


description: domain/bacteria