description: domain/bacteria

family: Bacillaceae

full scientific name: Peribacillus cavernae (Feng et al. 2016) Patel and Gupta 2020

genus: Peribacillus

species: Peribacillus cavernae

synonym: Bacillus cavernae

description: Bacillus cavernae strain L5 16S ribosomal RNA gene, partial sequence

description: ASM398913v1 assembly for Peribacillus cavernae L5

description: ASM3081318v1 assembly for Peribacillus cavernae DSM 105484


Matching level: species

class: Betaproteobacteria

description: domain/bacteria

domain: Bacteria

family: Chromobacteriaceae

full scientific name: Vogesella facilis Sheu et al. 2016

genus: Vogesella

keyword: phylum/pseudomonadota

order: Neisseriales

phylum: Pseudomonadota

species: Vogesella facilis

phylum: Proteobacteria

type strain: yes

database: nuccore

description: Vogesella sp. TTM-24 partial 16S rRNA gene, strain TTM-24

assembly level: scaffold

description: ASM4264852v1 assembly for Vogesella facilis KCTC 42742


class: Clostridia

description: domain/bacteria

family: Oscillospiraceae

full scientific name: <I>Flavonifractor</I> Carlier et al. 2010

genus: Flavonifractor

keyword: phylum/bacillota

order: Eubacteriales

phylum: Bacillota

species: Flavonifractor sp.

full scientific name: Flavonifractor sp.

order: Clostridia, not assigned to order

phylum: Firmicutes

type strain: no


class: Bacteroidia

description: domain/bacteria

family: Dysgonomonadaceae

full scientific name: Proteiniphilum saccharofermentans Hahnke et al. 2016

genus: Proteiniphilum

keyword: phylum/bacteroidota

order: Bacteroidales

phylum: Bacteroidota

species: Proteiniphilum saccharofermentans

phylum: Bacteroidetes

description: Proteiniphilum saccharofermentans strain M3/6 16S ribosomal RNA gene, partial sequence

assembly level: complete

description: M36 assembly for Proteiniphilum saccharofermentans M3/6


description: domain/bacteria

full scientific name: Fermentimonas caenicola Hahnke et al. 2016

genus: Fermentimonas

species: Fermentimonas caenicola

description: Fermentimonas caenicola strain ING2-E5B 16S ribosomal RNA gene, partial sequence

description: E5B assembly for Fermentimonas caenicola


description: domain/bacteria

family: Clostridiaceae

full scientific name: Desnuesiella massiliensis Hadjadj et al. 2016

genus: Desnuesiella

species: Desnuesiella massiliensis

description: Clostridiaceae bacterium mt10 partial 16S rRNA gene, strain mt10

description: Desnusiella massiliensis assembly for Desnuesiella massiliensis mt10


class: Cytophagia

description: domain/bacteria

family: Hymenobacteraceae

full scientific name: Pontibacter amylolyticus Wu et al. 2016

genus: Pontibacter

order: Cytophagales

species: Pontibacter amylolyticus

description: Pontibacter amylolyticus strain 9-2 16S ribosomal RNA gene, partial sequence

description: ASM1463884v1 assembly for Pontibacter amylolyticus CGMCC 1.12749


class: Chroococcophyceae

description: domain/bacteria

family: Aphanizomenaceae

full scientific name: <I>Aphanizomenon</I> Morren ex Bornet and Flahault 1886

genus: Aphanizomenon

keyword: phylum/cyanobacteriota

order: Nostocales

phylum: Cyanobacteriota

species: Aphanizomenon sp.

synonym: Limnochlide

class: Cyanobacteria, not assigned to class

family: Cyanobacteria, not assigned to family

full scientific name: Aphanizomenon sp.

phylum: Cyanobacteria


description: domain/bacteria

family: Pseudanabaenaceae

full scientific name: <I>Pseudanabaena</I> Lauterborn 1915

genus: Pseudanabaena

order: Pseudanabaenales

species: Pseudanabaena sp.

synonym: Anabaenella

class: Cyanophyceae

full scientific name: Pseudanabaena sp.

order: Synechococcales


class: Actinomycetes

description: domain/bacteria

family: Microbacteriaceae

full scientific name: Leucobacter margaritiformis Lee and Lee 2012

genus: Leucobacter

keyword: phylum/actinomycetota

order: Micrococcales

phylum: Actinomycetota

species: Leucobacter margaritiformis

class: Actinobacteria

order: Actinomycetales

phylum: Actinobacteria

description: Leucobacter margaritiformis strain A23 16S ribosomal RNA gene, partial sequence


class: Gammaproteobacteria

description: domain/bacteria

family: Methylococcaceae

full scientific name: Methylovulum psychrotolerans Oshkin et al. 2016

genus: Methylovulum

order: Methylococcales

species: Methylovulum psychrotolerans

description: Methylovulum psychrotolerans strain Sph1 16S ribosomal RNA gene, partial sequence

description: ASM292375v1 assembly for Methylovulum psychrotolerans Sph1


class: Alphaproteobacteria

description: domain/bacteria

family: Bartonellaceae

full scientific name: Brucella endophytica (Li et al. 2016) Hördt et al. 2020

genus: Brucella

order: Hyphomicrobiales

species: Brucella endophytica

synonym: Ochrobactrum endophyticum

synonym: Paramesorhizobium endophyticum

family: Brucellaceae

order: Rhizobiales

description: Brucella endophytica strain EGI 60010 16S ribosomal RNA gene, partial sequence

description: ASM1464061v1 assembly for Brucella endophytica CGMCC 1.15082

description: ASM4193012v1 assembly for Brucella endophytica DSM 29930


culture collection no.: DSM 24539, UNIQEM U893

class: Chitinispirillia

description: domain/bacteria

family: Chitinispirillaceae

full scientific name: Chitinispirillum alkaliphilum Sorokin et al. 2016

genus: Chitinispirillum

keyword: phylum/fibrobacterota

order: Chitinispirillales

phylum: Fibrobacterota

species: Chitinispirillum alkaliphilum

phylum: Fibrobacteres

description: Chitinispirillum alkaliphilum strain ACht6-1 16S ribosomal RNA gene, partial sequence

assembly level: contig

description: ASM104552v1 assembly for Chitinispirillum alkaliphilum ACht6-1


class: Halobacteria

description: domain/archaea

domain: Archaea

family: Haloarculaceae

full scientific name: Halorhabdus rudnickae Albuquerque et al. 2016

genus: Halorhabdus

keyword: phylum/methanobacteriota

order: Halobacteriales

phylum: Methanobacteriota

species: Halorhabdus rudnickae

phylum: Euryarchaeota

description: Halorhabdus rudnickae strain WSM-64 16S ribosomal RNA gene, partial sequence


class: Flavobacteriia

description: domain/bacteria

family: Weeksellaceae

full scientific name: Moheibacter stercoris Schauss et al. 2016

genus: Moheibacter

order: Flavobacteriales

species: Moheibacter stercoris

description: Moheibacter stercoris strain 784B1_12E-Caso 16S ribosomal RNA gene, partial sequence

description: ASM4054580v1 assembly for Moheibacter stercoris DSM 29388


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Winogradskyella sediminis Zhang et al. 2016

genus: Winogradskyella

species: Winogradskyella sediminis

description: Winogradskyella sediminis strain S5-23-3 16S ribosomal RNA gene, partial sequence

description: ASM338735v1 assembly for Winogradskyella sediminis DSM 28134


class: Opitutia

description: domain/bacteria

family: Opitutaceae

full scientific name: Cephaloticoccus capnophilus Lin et al. 2016

genus: Cephaloticoccus

keyword: phylum/verrucomicrobiota

order: Opitutales

phylum: Verrucomicrobiota

species: Cephaloticoccus capnophilus

class: Opitutae

phylum: Verrucomicrobia

description: Cephaloticoccus capnophilus strain CV41 16S ribosomal RNA gene, partial sequence

description: ASM158004v1 assembly for Cephaloticoccus capnophilus CV41


description: domain/bacteria

family: Microcoleaceae

full scientific name: Kamptonema formosum (Bory ex Gomont 1892) Strunecký et al. 2014

genus: Kamptonema

order: Oscillatoriales

species: Kamptonema formosum

synonym: Phormidium formosum

synonym: Oscillatoria formosa

family: Phormidiaceae

full scientific name: Phormidium formosum

genus: Phormidium

species: Phormidium formosum


description: domain/bacteria

family: Microcystaceae

full scientific name: Aphanothece stagnina (Sprengel 1807) Braun 1863

genus: Aphanothece

order: Chroococcales

species: Aphanothece stagnina

synonym: Coccochloris stagnina

family: Aphanothecaceae

full scientific name: Aphanothece stagnina

order: Not assigned to order


description: domain/bacteria

family: Tolypotrichaceae

full scientific name: <I>Tolypothrix</I> Kützing ex Bornet and Flahault 1886

genus: Tolypothrix

species: Tolypothrix sp.

synonym: Hassallia

family: Tolypothrichaceae

full scientific name: Tolypothrix sp.


description: domain/bacteria

family: Synechococcaceae

full scientific name: Cyanobium rubescens (Chang 1980) Komárek et al. 1999

genus: Cyanobium

species: Cyanobium rubescens

synonym: Synechococcus rubescens

full scientific name: Synechococcus rubescens

genus: Synechococcus

species: Synechococcus rubescens


description: domain/bacteria

family: Spirulinaceae

full scientific name: <I>Spirulina</I> Turpin ex Gomont 1892

genus: Spirulina

order: Spirulinales

species: Spirulina sp.

synonym: Paraspirulina

family: Cyanobacteria, not assigned to family

full scientific name: Spirulina sp.


description: domain/bacteria

full scientific name: Spirulina subsalsa Oersted ex Gomont 1892

species: Spirulina subsalsa

synonym: Paraspirulina subsalsa

synonym: Oscillatoria subsalsa

full scientific name: Spirulina subsalsa


description: domain/bacteria

family: Nodulariaceae

full scientific name: <I>Nodularia</I> Mertens ex Bornet and Flahault 1886

genus: Nodularia

species: Nodularia sp.

full scientific name: Nodularia sp.


description: domain/bacteria

family: Oscillatoriaceae

full scientific name: <I>Oscillatoria</I> Vaucher ex Gomont 1892

genus: Oscillatoria

species: Oscillatoria sp.

synonym: Oscillatoriella

synonym: Xanthotrichum

synonym: Trichophorus

full scientific name: Oscillatoria sp.


description: domain/bacteria

full scientific name: Perforafilum tunnellii corrig. Zimba et al. 2021

genus: Perforafilum

species: Perforafilum tunnellii

synonym: Perforafilum tunnelli

full scientific name: Perforafilum tunnellii Zimba et al. 2021


description: domain/bacteria

full scientific name: Microcoleus anatoxicus Stancheva and Conklin 2020

genus: Microcoleus

species: Microcoleus anatoxicus


description: domain/bacteria

full scientific name: Baaleninema simplex Samylina et al. 2021

genus: Baaleninema

species: Baaleninema simplex

full scientific name: Baaleninema simplex


description: domain/bacteria

family: Chroococcaceae

full scientific name: <I>Chroococcus</I> Nägeli 1849

genus: Chroococcus

species: Chroococcus sp.

synonym: Rhodococcus

full scientific name: Chroococcus sp.


Matching level: strain

description: domain/bacteria

family: Gomontiellaceae

full scientific name: Crinalium epipsammum De Winder et al. 1990

genus: Crinalium

order: Gomontiellales

species: Crinalium epipsammum

full scientific name: Crinalium epipsammum De Winder et al. 1991

description: Crinalium epipsammum SAG 22.89 gene for 16S ribosomal RNA, partial sequence.

description: ASM31749v1 assembly for Crinalium epipsammum PCC 9333


description: domain/bacteria

full scientific name: Cyanocohniella crotaloides Jung et al. 2020

genus: Cyanocohniella

order: Nostocales

species: Cyanocohniella crotaloides

family: Nostocaceae

full scientific name: Cyanocohniella crotaloides


description: domain/bacteria

full scientific name: <I>Nostoc</I> Vaucher ex Bornet and Flahault 1886

genus: Nostoc

species: Nostoc sp.

synonym: Polycoccus

synonym: Amorphonostoc

synonym: Stratonostoc

full scientific name: Nostoc sp.


description: domain/bacteria

family: Aphanizomenaceae

full scientific name: <I>Raphidiopsis</I> Fritsch and Rich 1929

genus: Raphidiopsis

species: Raphidiopsis sp.

synonym: Cylindrospermopsis

full scientific name: Cylindrospermopsis sp.

genus: Cylindrospermopsis

species: Cylindrospermopsis sp.


description: domain/bacteria

full scientific name: Sodalinema stali Samylina et al. 2021

genus: Sodalinema

species: Sodalinema stali

family: Coleofasciculaceae

full scientific name: Sodalinema stali Samylina, O. S., Sinetova, M. A., Kupriyanova, E. V., Starikov, A. Y., Sukhacheva, M. V., Dziuba, M. V., and Tourova, T. P. (2021).  FEMS Microbiology Ecology 97, fiab104.


description: domain/bacteria

full scientific name: Sodalinema stali Samylina, O. S., Sinetova, M. A., Kupriyanova, E. V., Starikov, A. Y., Sukhacheva, M. V., Dziuba, M. V., and Tourova, T. P. (2021). FEMS Microbiology Ecology 97, fiab104.

description: Sodalinema stali CCY9619 16S ribosomal RNA gene, partial sequence.

description: Sodalinema stali CCY9619 16S ribosomal RNA gene, partial sequence and 16S-23S ribosomal RNA intergenic spacer tRNA-Ile and tRNA-Ala genes, complete sequence.


description: domain/bacteria

full scientific name: Blennothrix cantharidosma (Gomont ex Gomont 1892) Anagnostidis and Komárek 1988

genus: Blennothrix

species: Blennothrix cantharidosma

synonym: Hydrocoleum cantharidosmum

full scientific name: Hydrocoleum cantharidosmum Gomont M., 1892

genus: Hydrocoleum

species: Hydrocoleum cantharidosmum


description: domain/bacteria

full scientific name: Lyngbya aestuarii Liebman ex Gomont 1892

genus: Lyngbya

species: Lyngbya aestuarii

synonym: Capillus aestuarii

full scientific name: Lyngbya aestuarii Gomont M., 1892


description: domain/bacteria

full scientific name: <I>Lyngbya</I> Agardh ex Gomont 1892

species: Lyngbya sp.

synonym: Rheamaris

full scientific name: Lyngbya sp.


description: domain/bacteria

strain designation: "Oscillatoria limosa" 23

description: ASM16909v1 assembly for Lyngbya sp. PCC 8106


description: domain/bacteria

family: Leptolyngbyaceae

full scientific name: <I>Leptolyngbya</I> Anagnostidis and Komárek 1988

genus: Leptolyngbya

order: Leptolyngbyales

species: Leptolyngbya sp.

synonym: Spirocoleus

synonym: Radiculonema

full scientific name: Leptolyngbya sp.


full scientific name: Cyanobacteria sp.

genus: Cyanobacteria

species: Cyanobacteria sp.


description: domain/bacteria

full scientific name: Nostoc punctiforme (Kützing 1841) Hariot 1891

species: Nostoc punctiforme

synonym: Polycoccus punctiformis

synonym: Amorphonostoc punctiforme

synonym: Microcystis punctiformis

full scientific name: Nostoc punctiforme


description: domain/bacteria

family: Nodosilineaceae

full scientific name: <I>Halomicronema</I> Abed et al. 2002

genus: Halomicronema

order: Nodosilineales

species: Halomicronema sp.

full scientific name: Halomicronema sp.

order: Synechococcales


description: domain/bacteria

full scientific name: Cyanobium gracile Rippka and Cohen-Bazire 1983

genus: Cyanobium

species: Cyanobium gracile

full scientific name: Cyanobium gracile


full scientific name: Coleofasciculus chtonoplastes

genus: Coleofasciculus

species: Coleofasciculus chtonoplastes

strain designation: CHI


strain designation: EDA


strain designation: STO


strain designation: LZW


description: domain/bacteria

full scientific name: <I>Coleofasciculus</I> Siegesmund et al. 2008

order: Coleofasciculales

species: Coleofasciculus sp.

full scientific name: Coleofasciculus sp.

description: Coleofasciculus chthonoplastes SAG 2208 16S ribosomal RNA gene, partial sequence 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence and 23S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Cyclobacteriaceae

full scientific name: Algoriphagus roseus Kohli et al. 2016

genus: Algoriphagus

order: Cytophagales

species: Algoriphagus roseus

description: Algoriphagus roseus strain W29 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Aequorivita aquimaris (Thevarajoo et al. 2016) García-López et al. 2020

genus: Aequorivita

species: Aequorivita aquimaris

synonym: Aequorivita aquimaris

synonym: Vitellibacter aquimaris

description: Aequorivita aquimaris strain D-24 16S ribosomal RNA gene, partial sequence

description: ASM157315v1 assembly for Aequorivita aquimaris D-24


class: Bacilli

description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus pantholopis Bai et al. 2016

genus: Streptococcus

order: Lactobacillales

species: Streptococcus pantholopis

description: Streptococcus pantholopis strain TA 26 16S ribosomal RNA gene, complete sequence


class: Mollicutes

description: domain/bacteria

family: Metamycoplasmataceae

full scientific name: Mycoplasmopsis ciconiae (Möller Palau-Ribes et al. 2016) Gupta et al. 2018

genus: Mycoplasmopsis

keyword: phylum/mycoplasmatota

order: Mycoplasmoidales

phylum: Mycoplasmatota

species: Mycoplasmopsis ciconiae

synonym: Mycoplasma ciconiae

order: Mycoplasmatales

phylum: Tenericutes

strain designation: ST 57

description: Mycoplasmopsis ciconiae strain ST 57 16S ribosomal RNA gene, partial sequence

description: Mycoplasma sp. ST 57 16S ribosomal RNA gene, partial sequence

description: ASM3635006v1 assembly for Mycoplasmopsis ciconiae DSM 25251


description: domain/bacteria

strain designation: ST 24

description: Mycoplasmopsis ciconiae strain ST 24 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

strain designation: ST 99

description: Mycoplasmopsis ciconiae strain ST 99 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Mycoplasmopsis ciconiae strain ST 102 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

strain designation: ST 56 clone 1

description: Mycoplasmopsis ciconiae strain ST 56 16S ribosomal RNA gene, partial sequence


description: domain/bacteria


class: Epsilonproteobacteria

description: domain/bacteria

family: Campylobacteraceae

full scientific name: Campylobacter geochelonis Piccirillo et al. 2016

genus: Campylobacter

order: Campylobacterales

phylum: Pseudomonadota

species: Campylobacter geochelonis

phylum: Proteobacteria

description: ASM1320168v1 assembly for Campylobacter geochelonis LMG 29375

description: 16473_4#69 assembly for Campylobacter geochelonis RC20


description: domain/bacteria

description: 16473_4#68 assembly for Campylobacter geochelonis RC7


description: domain/bacteria

description: 16473_4#70 assembly for Campylobacter geochelonis RC11


class: Betaproteobacteria

description: domain/bacteria

family: Burkholderiaceae

full scientific name: <I>Paraburkholderia</I> Sawana et al. 2015

genus: Paraburkholderia

order: Burkholderiales

species: Paraburkholderia sp.

full scientific name: Paraburkholderia sp.


class: Sphingobacteriia

description: domain/bacteria

family: Sphingobacteriaceae

full scientific name: Mucilaginibacter phyllosphaerae Aydogan et al. 2016

genus: Mucilaginibacter

order: Sphingobacteriales

species: Mucilaginibacter phyllosphaerae


description: domain/bacteria

family: Aurantimonadaceae

full scientific name: Aurantimonas endophytica Liu et al. 2016

genus: Aurantimonas

order: Hyphomicrobiales

species: Aurantimonas endophytica

order: Rhizobiales


class: Spirochaetia

description: domain/bacteria

family: Brachyspiraceae

full scientific name: Brachyspira suanatina Mushtaq et al. 2016

genus: Brachyspira

keyword: phylum/spirochaetota

order: Brachyspirales

phylum: Spirochaetota

species: Brachyspira suanatina

synonym: Brachyspira suanatina

order: Spirochaetales

phylum: Spirochaetes

description: Brachyspira suanatina strain AN4859/03 16S ribosomal RNA gene, partial sequence

description: BRSU_AN4859/03 assembly for Brachyspira suanatina AN4859/03


description: domain/bacteria

family: Chelatococcaceae

full scientific name: Chelatococcus reniformis Gu et al. 2016

genus: Chelatococcus

species: Chelatococcus reniformis


description: domain/bacteria

family: Aeromonadaceae

full scientific name: <I>Oceanisphaera</I> Romanenko et al. 2003

genus: Oceanisphaera

order: Aeromonadales

species: Oceanisphaera sp.

full scientific name: Oceanisphaera sp.


description: domain/bacteria

family: Paracoccaceae

full scientific name: <I>Thioclava</I> Sorokin et al. 2005

genus: Thioclava

order: Rhodobacterales

species: Thioclava sp.

family: Rhodobacteraceae

full scientific name: Thioclava sp.


description: domain/bacteria

family: Cellvibrionaceae

full scientific name: Gilvimarinus japonicus Kouzui et al. 2016

genus: Gilvimarinus

order: Cellvibrionales

species: Gilvimarinus japonicus

order: Alteromonadales


description: domain/bacteria

family: Alcaligenaceae

full scientific name: Bordetella pseudohinzii Ivanov et al. 2016

genus: Bordetella

species: Bordetella pseudohinzii


description: domain/bacteria

family: Nevskiaceae

full scientific name: Polycyclovorans algicola Gutiérrez et al. 2021

genus: Polycyclovorans

order: Nevskiales

species: Polycyclovorans algicola

full scientific name: Polycyclovorans algicola Gutierrez et al. 2013

description: Polycyclovorans algicola strain TG408 16S ribosomal RNA gene, partial sequence

description: ASM71124v1 assembly for Polycyclovorans algicola TG408


Matching level: subspecies

description: domain/bacteria

full scientific name: Advenella kashmirensis subsp. methylica Shmareva et al. 2017

genus: Advenella

species: Advenella kashmirensis subsp. methylica

description: Advenella kashmirensis subsp. methylica strain PK1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Allobogoriellaceae

full scientific name: <I>Georgenia</I> Altenburger et al. 2002

genus: Georgenia

order: Micrococcales

species: Georgenia sp.

synonym: Oceanitalea

family: Bogoriellaceae

full scientific name: Georgenia sp.

order: Actinomycetales

description: Georgenia sp. YIM 80691 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Dermacoccaceae

full scientific name: Flexivirga oryzae Hyeon et al. 2017

genus: Flexivirga

species: Flexivirga oryzae

description: Flexivirga oryzae strain R1 16S ribosomal RNA gene, partial sequence

description: ASM1419080v1 assembly for Flexivirga oryzae DSM 105369


description: domain/bacteria

full scientific name: Pedobacter zeae Gao et al. 2017

genus: Pedobacter

phylum: Bacteroidota

species: Pedobacter zeae

phylum: Bacteroidetes

description: Pedobacter zeae strain 22 16S ribosomal RNA gene, partial sequence

description: Pedobacter zeae strain CGMCC 1.15287 16S ribosomal RNA gene, partial sequence.

description: ASM1464157v1 assembly for Pedobacter zeae CGMCC 1.15287

description: ASM1419671v1 assembly for Pedobacter zeae DSM 100774


class: Cytophagia

description: domain/bacteria

family: Cyclobacteriaceae

full scientific name: Algoriphagus iocasae Sun and Sun 2017

genus: Algoriphagus

order: Cytophagales

species: Algoriphagus iocasae


class: Fusobacteriia

description: domain/bacteria

family: Fusobacteriaceae

full scientific name: Fusobacterium gastrosuis De Witte et al. 2017

genus: Fusobacterium

keyword: phylum/fusobacteriota

order: Fusobacteriales

phylum: Fusobacteriota

species: Fusobacterium gastrosuis

order: Clostridiales

phylum: Fusobacteria

strain designation: CDW1, P6 Po

description: Fusobacterium gastrosuis partial 16S rRNA gene, type strain CDW1T, isolate P6 Po


description: domain/bacteria

family: Helicobacteraceae

full scientific name: Helicobacter ailurogastricus Joosten et al. 2017

genus: Helicobacter

order: Campylobacterales

species: Helicobacter ailurogastricus

description: gastric feline helicobacters assembly for Helicobacter ailurogastricus


description: domain/bacteria


description: domain/bacteria

family: Devosiaceae

full scientific name: Devosia lucknowensis Dua et al. 2013

genus: Devosia

species: Devosia lucknowensis

family: Hyphomicrobiaceae

full scientific name: Devosia lucknowensis Dua et al. 2017

description: Devosia lucknowensis strain L15 16S ribosomal RNA gene, partial sequence

description: IMG-taxon 2708742467 annotated assembly for Devosia lucknowensis L15


class: Clostridia

description: domain/bacteria

family: Thermohalobacteraceae

full scientific name: Sporosalibacterium tautonense Podosokorskaya et al. 2017

genus: Sporosalibacterium

order: Tissierellales

phylum: Bacillota

species: Sporosalibacterium tautonense

family: Clostridiaceae

phylum: Firmicutes

description: Sporosalibacterium tautonense strain MRo-4 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Thermodesulfobiaceae

full scientific name: Thermodesulfobium acidiphilum Frolov et al. 2017

genus: Thermodesulfobium

order: Thermoanaerobacterales

species: Thermodesulfobium acidiphilum

description: Thermodesulfobium acidiphilum strain 3127-1 16S ribosomal RNA gene, partial sequence

description: ASM305796v1 assembly for Thermodesulfobium acidiphilum 3127-1


culture collection no.: DSM 102819, TISTR 2371, Cavy grass 6

description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus caviae Palakawong Na Ayudthaya et al. 2017

genus: Streptococcus

order: Lactobacillales

species: Streptococcus caviae

description: Streptococcus caviae partial 16S rRNA gene, strain Cavy grass 6


description: domain/bacteria

family: Bacillaceae

full scientific name: Alkalicoccus halolimnae Zhao et al. 2017

genus: Alkalicoccus

order: Caryophanales

species: Alkalicoccus halolimnae

order: Bacillales

description: Bacillus sp. (in: firmicutes) 16S ribosomal RNA gene, partial sequence

description: ASM801477v2 assembly for Alkalicoccus halolimnae BZ-SZ-XJ29


description: domain/bacteria

family: Defluviitaleaceae

full scientific name: Defluviitalea raffinosedens Ma et al. 2017

genus: Defluviitalea

order: Eubacteriales

species: Defluviitalea raffinosedens

description: Defluviitalea raffinosedens strain A6 16S ribosomal RNA gene, partial sequence

description: ASM1690877v1 assembly for Defluviitalea raffinosedens DSM 28090


description: domain/bacteria

family: Cytobacillaceae

full scientific name: Mesobacillus zeae (Kämpfer et al. 2017) Patel and Gupta 2020

genus: Mesobacillus

species: Mesobacillus zeae

synonym: Bacillus zeae

description: Mesobacillus zeae strain JJ-247 16S ribosomal RNA gene, partial sequence

description: ASM1361894v1 assembly for Mesobacillus zeae JJ-247

description: ASM357070v1 assembly for Mesobacillus zeae JJ-247

description: Mesobacillus zeae strain DSM 103964

description: Mesobacillus zeae DSM 103964


description: domain/bacteria

family: Oscillospiraceae

full scientific name: Allofournierella massiliensis (Togo et al. 2017) Oren and Molinari Novoa 2024

genus: Allofournierella

species: Allofournierella massiliensis

synonym: Fournierella massiliensis

full scientific name: Fournierella massiliensis Togo et al. 2017

genus: Fournierella

species: Fournierella massiliensis

description: Ruminococcaceae bacterium AT2 partial 16S rRNA gene, strain AT2

description: ASM434526v1 assembly for Allofournierella massiliensis DSM 100451


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Faecalimonas umbilicata Sakamoto et al. 2017

genus: Faecalimonas

species: Faecalimonas umbilicata

description: Faecalimonas umbilicata gene for 16S ribosomal RNA, partial sequence, strain: EGH7

description: ASM340261v1 assembly for Faecalimonas umbilicata EGH7

description: ASM434609v1 assembly for Faecalimonas umbilicata DSM 103426


culture collection no.: DSM 103668, ATCC TSD-63

class: Erysipelotrichia

description: domain/bacteria

family: Erysipelotrichaceae

full scientific name: Ileibacterium valens Cox et al. 2017

genus: Ileibacterium

order: Erysipelotrichales

species: Ileibacterium valens

description: Ileibacterium valens strain NYU-BL-A3 16S ribosomal RNA gene, partial sequence

description: ASM194552v1 assembly for Ileibacterium valens NYU-BL-A3


culture collection no.: DSM 103457, ATCC TSD-64

description: domain/bacteria

full scientific name: Dubosiella newyorkensis Cox et al. 2017

genus: Dubosiella

species: Dubosiella newyorkensis

description: Dubosiella newyorkensis strain NYU-BL-A4 16S ribosomal RNA gene, partial sequence

description: ASM194560v1 assembly for Dubosiella newyorkensis NYU-BL-A4


class: Calditrichota, not assigned to class

description: domain/bacteria

family: Calditrichota, not assigned to family

full scientific name: Calorithrix insularis Kompantseva et al. 2017

genus: Calorithrix

keyword: phylum/calditrichota

order: Calditrichota, not assigned to order

phylum: Calditrichota

species: Calorithrix insularis

class: Calditrichaeota, not assigned to class

family: Calditrichaeota, not assigned to family

order: Calditrichaeota, not assigned to order

phylum: Calditrichaeota

strain designation: KR

description: Calorithrix insularis strain KR 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Treponemataceae

full scientific name: Rectinema cohabitans Koelschbach et al. 2017

genus: Rectinema

order: Spirochaetales

species: Rectinema cohabitans

strain designation: HM

description: Rectinema cohabitans strain HM 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Treponema ruminis Newbrook et al. 2017

genus: Treponema

species: Treponema ruminis

description: Treponema ruminis strain Ru1 16S ribosomal RNA gene, partial sequence

description: ASM1716130v1 assembly for Treponema ruminis RU1

description: ASM1420197v1 assembly for Treponema ruminis DSM 103462


description: domain/bacteria

family: Peptostreptococcaceae

full scientific name: <I>Romboutsia</I> Gerritsen et al. 2014

genus: Romboutsia

order: Peptostreptococcales

species: Romboutsia sp.

full scientific name: Romboutsia sp.

strain designation: A6c, LA1

description: Romboutsia sp. LA1 16S ribosomal RNA gene, partial sequence


class: Vicinamibacteria

description: domain/bacteria

family: Vicinamibacteraceae

full scientific name: Luteitalea pratensis Vieira et al. 2017

genus: Luteitalea

keyword: phylum/acidobacteriota

order: Vicinamibacterales

phylum: Acidobacteriota

species: Luteitalea pratensis

phylum: Acidobacteria

description: Luteitalea pratensis strain HEG_-6_39 16S ribosomal RNA gene, partial sequence

description: ASM161886v1 assembly for Luteitalea pratensis DSM 100886; HEG_-6_39


class: Gammaproteobacteria

description: domain/bacteria

family: Halomonadaceae

full scientific name: Halomonas alkalicola Tang et al. 2017

genus: Halomonas

order: Oceanospirillales

species: Halomonas alkalicola

description: Halomonas alkalicola strain CICC 11012S 16S ribosomal RNA gene, partial sequence.

description: Halomonas alkalicola strain CICC 11012s 16S ribosomal RNA gene, partial sequence.

description: ASM3070420v1 assembly for Halomonas alkalicola CICC 11012s

description: ASM4243048v1 assembly for Halomonas alkalicola CICC 11012s

description: ASM4243342v1 assembly for Halomonas alkalicola CICC 11012S


description: domain/bacteria

family: Yersiniaceae

full scientific name: Rouxiella silvae Le Flèche-Matéos et al. 2017

genus: Rouxiella

order: Enterobacterales

species: Rouxiella silvae

order: Enterobacteriales, not validated

description: Rouxiella silvae strain 213 16S ribosomal RNA gene, partial sequence

description: ASM209362v1 assembly for Rouxiella silvae 213


description: domain/bacteria

family: Natronincolaceae

full scientific name: Alkaliphilus hydrothermalis Ben Aissa et al. 2017

genus: Alkaliphilus

species: Alkaliphilus hydrothermalis

order: Clostridiales

description: Alkaliphilus hydrothermalis strain FatMR1 16S ribosomal RNA gene, partial sequence

description: ASM1690855v1 assembly for Alkaliphilus hydrothermalis DSM 25890


culture collection no.: DSM 103136, ATCC TSD-57

description: domain/bacteria

family: Neisseriaceae

full scientific name: Neisseria arctica Hansen et al. 2017

genus: Neisseria

order: Neisseriales

species: Neisseria arctica

description: Neisseria arctica strain KH1479 16S ribosomal RNA gene, partial sequence

description: Neisseria arctica strain KH1503 16S ribosomal RNA gene, partial sequence

description: ASM102786v1 assembly for Neisseria arctica KH1503

description: ASM2287090v1 assembly for Neisseria arctica KH1503


description: domain/bacteria

family: Comamonadaceae

full scientific name: Tibeticola sediminis Khan et al. 2017

genus: Tibeticola

order: Burkholderiales

species: Tibeticola sediminis

description: Tibeticola sediminis strain YIM 73013 16S ribosomal RNA gene, partial sequence

description: ASM384383v1 assembly for Tibeticola sediminis DSM 101684


description: domain/bacteria

family: Thiobacillaceae

full scientific name: Sulfuritortus calidifontis Kojima et al. 2017

genus: Sulfuritortus

order: Spirillales

species: Sulfuritortus calidifontis

family: Betaproteobacteria, not assigned to family

order: Betaproteobacteria, not assigned to order

description: Sulfuritortus calidifontis gene for 16S ribosomal RNA, partial sequence, strain: J1A

description: ASM396727v1 assembly for Sulfuritortus calidifontis J1A

description: ASM434608v1 assembly for Sulfuritortus calidifontis DSM 103923


class: Deltaproteobacteria

description: domain/bacteria

family: Archangiaceae

full scientific name: Vitiosangium subalbum Awal et al. 2017

genus: Vitiosangium

order: Myxococcales

species: Vitiosangium subalbum

description: Vitiosangium subalbum strain MCy10944 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Vitiosangium cumulatum Awal et al. 2017

species: Vitiosangium cumulatum

description: Vitiosangium cumulatum strain MCy10943 16S ribosomal RNA gene, partial sequence


class: Actinomycetes

description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium virginiense Vasireddy et al. 2017

genus: Mycobacterium

order: Mycobacteriales

phylum: Actinomycetota

species: Mycobacterium virginiense

synonym: Mycolicibacter virginiensis

class: Actinobacteria

order: Actinomycetales

phylum: Actinobacteria

description: Mycolicibacter virginiensis strain MO-233 16S ribosomal RNA gene, complete sequence

description: ASM2237493v2 assembly for Mycolicibacter virginiensis DSM 100883


class: Alphaproteobacteria

description: domain/bacteria

family: Roseobacteraceae

full scientific name: Rubricella aquisinus Yang et al. 2017

genus: Rubricella

order: Rhodobacterales

species: Rubricella aquisinus

family: Rhodobacteraceae

description: Rubricella aquisinus strain J82 16S ribosomal RNA gene, partial sequence

description: ASM1419944v1 assembly for Rubricella aquisinus DSM 103377


class: Bacilli

description: domain/bacteria

family: Enterococcaceae

full scientific name: Vagococcus teuberi Wullschleger et al. 2018

genus: Vagococcus

order: Lactobacillales

species: Vagococcus teuberi

description: ASM187020v1 assembly for Vagococcus teuberi DSM 21459


description: domain/bacteria

family: Actinomycetaceae

full scientific name: Actinomyces vulturis Meng et al. 2017

genus: Actinomyces

species: Actinomyces vulturis

description: Actinomyces vulturis strain VUL7 16S ribosomal RNA gene, partial sequence

description: ASM168730v1 assembly for Actinomyces vulturis VUL7


description: domain/bacteria

full scientific name: Mycobacterium persicum Shahraki et al. 2017

species: Mycobacterium persicum

description: Mycobacterium persicum strain AFPC-000227 16S ribosomal RNA gene, partial sequence

description: ASM208667v1 assembly for Mycobacterium persicum AFPC-000227


description: domain/bacteria

family: Propionibacteriaceae

full scientific name: Naumannella huperziae Sun et al. 2017

genus: Naumannella

order: Propionibacteriales

species: Naumannella huperziae

description: Naumannella huperziae strain CPCC 204135 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Boudabousia liubingyangii (Meng et al. 2017) Yang et al. 2021

genus: Boudabousia

species: Boudabousia liubingyangii

synonym: Actinomyces liubingyangii

description: Boudabousia liubingyangii strain VUL4_1 16S ribosomal RNA gene, partial sequence

description: ASM190724v1 assembly for Boudabousia liubingyangii VUL4_1


culture collection no.: DSM 103086, ATCC TSD-56

class: Thermoprotei

description: domain/archaea

family: Thermoproteaceae

full scientific name: Pyrobaculum igneiluti Lee et al. 2017

genus: Pyrobaculum

keyword: phylum/thermoproteota

order: Thermoproteales

phylum: Thermoproteota

species: Pyrobaculum igneiluti

phylum: Crenarchaeota

description: Pyrobaculum igneiluti strain 521 16S ribosomal RNA gene, partial sequence


class: Chitinophagia

description: domain/bacteria

family: Chitinophagaceae

full scientific name: Flaviaestuariibacter luteus corrig. Pascual et al. 2017

genus: Flaviaestuariibacter

order: Chitinophagales

species: Flaviaestuariibacter luteus

synonym: Flaviaesturariibacter luteus

full scientific name: Flaviaesturariibacter luteus Pascual et al. 2017

genus: Flaviaesturariibacter

order: Sphingobacteriales

species: Flaviaesturariibacter luteus

description: Flaviaesturariibacter sp. DSM 100282 partial 16S rRNA gene, type strain AW305 = DSM 100282T


description: domain/bacteria

family: Clostridiaceae

full scientific name: Marinisporobacter balticus Vandieken et al. 2017

genus: Marinisporobacter

order: Eubacteriales

species: Marinisporobacter balticus

description: Marinisporobacter balticus strain 59.4M 16S ribosomal RNA gene, partial sequence

description: ASM434570v1 assembly for Marinisporobacter balticus DSM 102940


description: domain/bacteria

full scientific name: Alkaliphilus namsaraevii Zakharyuk et al. 2017

order: Peptostreptococcales

species: Alkaliphilus namsaraevii

description: Alkaliphilus namsaraevii strain X-07-2 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Desulfitobacteriaceae

full scientific name: Desulfosporosinus nitroreducens Vandieken et al. 2017

genus: Desulfosporosinus

species: Desulfosporosinus nitroreducens

family: Peptococcaceae

description: Desulfosporosinus nitroreducens strain 59.4F 16S ribosomal RNA gene, partial sequence

description: ASM2389701v1 assembly for Desulfosporosinus nitroreducens 59.4F


description: domain/bacteria

description: Desulfosporosinus nitroreducens strain 59.4B 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Desulfosporosinus fructosivorans Vandieken et al. 2017

species: Desulfosporosinus fructosivorans

description: Desulfosporosinus fructosivorans strain 63.6F 16S ribosomal RNA gene, partial sequence

description: ASM476604v1 assembly for Desulfosporosinus fructosivorans 63.6F


class: Aquificia

description: domain/bacteria

family: Desulfurobacteriaceae

full scientific name: Desulfurobacterium indicum Cao et al. 2017

genus: Desulfurobacterium

keyword: phylum/aquificota

order: Desulfurobacteriales

phylum: Aquificota

species: Desulfurobacterium indicum

class: Aquificae

order: Aquificales

phylum: Aquificae

description: Desulfurobacterium indicum strain K6013 16S ribosomal RNA gene, partial sequence

description: ASM196898v1 assembly for Desulfurobacterium indicum K6013


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas lactis von Neubeck et al. 2017

genus: Pseudomonas

order: Pseudomonadales

phylum: Pseudomonadota

species: Pseudomonas lactis

phylum: Proteobacteria

description: Pseudomonas lactis strain DSM 29167 16S ribosomal RNA gene, partial sequence.

description: MG336 assembly for Pseudomonas lactis DSM 29167


description: domain/bacteria

full scientific name: Pseudomonas paralactis von Neubeck et al. 2017

species: Pseudomonas paralactis

order: Burkholderiales

description: Pseudomonas paralactis strain DSM 29164 16S ribosomal RNA gene, partial sequence.

description: mG273 assembly for Pseudomonas paralactis DSM 29164


description: domain/bacteria

family: Pasteurellaceae

full scientific name: Rodentibacter ratti Adhikary et al. 2017

genus: Rodentibacter

order: Pasteurellales

species: Rodentibacter ratti

description: Rodentibacter ratti strain F75 16S ribosomal RNA gene, partial sequence

description: ASM200048v1 assembly for Rodentibacter ratti F75


description: domain/bacteria

full scientific name: Rodentibacter heidelbergensis Adhikary et al. 2017

species: Rodentibacter heidelbergensis

description: Rodentibacter heidelbergensis strain 1996025094 16S ribosomal RNA gene, partial sequence

description: ASM200012v1 assembly for Rodentibacter heidelbergensis Ac69


description: domain/bacteria

full scientific name: Rodentibacter trehalosifermentans Adhikary et al. 2017

species: Rodentibacter trehalosifermentans

description: Rodentibacter trehalosifermentans strain H1987082031 16S ribosomal RNA gene, partial sequence

description: ASM200054v1 assembly for Rodentibacter trehalosifermentans H1987082031


description: domain/bacteria

full scientific name: Rodentibacter rarus Adhikary et al. 2017

species: Rodentibacter rarus

description: Rodentibacter rarus strain CCUG 17206 16S ribosomal RNA gene, complete sequence

description: Bisgaard Taxon 17 genomic DNA containing 16S-23S intergenic spacer region, strain CCUG17206

description: Bisgaard Taxon 17 strain CCUG 17206 16S-23S ribosomal RNA intergenic spacer, partial sequence; and tRNA-Ile and tRNA-Ala genes, complete sequence.

description: Bisgaard Taxon 17 strain CCUG 17206 16S-23S ribosomal RNA intergenic spacer, partial sequence; and tRNA-Glu gene, complete sequence.

description: Rodentibacter rarus strain CCUG 17206 16S ribosomal RNA gene, partial sequence.

description: ASM199896v1 assembly for Rodentibacter rarus CCUG 17206


description: domain/bacteria

full scientific name: Rodentibacter mrazii Adhikary et al. 2017

species: Rodentibacter mrazii

description: Rodentibacter mrazii strain Ppn418 16S ribosomal RNA gene, partial sequence

description: ASM199882v1 assembly for Rodentibacter mrazii Ppn418


class: Betaproteobacteria

description: domain/bacteria

family: Alcaligenaceae

full scientific name: Paracandidimonas soli Kämpfer et al. 2017

genus: Paracandidimonas

species: Paracandidimonas soli

description: Paracandidimonas soli strain IMT-305 16S ribosomal RNA gene, partial sequence

description: Paracandidimonas soli strain CCM 8599 16S ribosomal RNA gene, partial sequence.

description: ASM434200v1 assembly for Paracandidimonas soli DSM 100048

description: ASM4264732v1 assembly for Paracandidimonas soli CCM 8599


description: domain/bacteria

full scientific name: Arcanobacterium wilhelmae Sammra et al. 2017

genus: Arcanobacterium

species: Arcanobacterium wilhelmae

description: Arcanobacterium sp. 647 partial 16S rRNA gene, isolate 647

description: Arcanobacterium wilhelmae strain DSM 102162 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence.

description: ASM2963276v1 assembly for Arcanobacterium wilhelmae DSM 102162

description: ASM3081150v1 assembly for Arcanobacterium wilhelmae DSM 102162


description: domain/bacteria

family: Dermatophilaceae

full scientific name: Mobilicoccus caccae Chen et al. 2017

genus: Mobilicoccus

order: Micrococcales

species: Mobilicoccus caccae

description: Mobilicoccus caccae strain YIM 101593 16S ribosomal RNA gene, partial sequence

description: ASM3016163v1 assembly for Mobilicoccus caccae NBRC 113072


description: domain/bacteria

family: Nocardioidaceae

full scientific name: Nocardioides litoris Lee et al. 2017

genus: Nocardioides

species: Nocardioides litoris

description: Nocardioides litoris strain 002-2 16S ribosomal RNA gene, partial sequence

description: ASM634631v1 assembly for Nocardioides litoris DSM 103718


description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: Bifidobacterium apri Pechar et al. 2017

genus: Bifidobacterium

order: Bifidobacteriales

species: Bifidobacterium apri

description: Bifidobacterium apri strain RP115 16S-23S ribosomal RNA intergenic spacer and 23S ribosomal RNA gene, partial sequence

description: Bifidobacterium apri strain RP115 16S ribosomal RNA gene, partial sequence

description: ASM929948v1 assembly for Bifidobacterium apri DSM 100238

description: ASM4243255v1 assembly for Bifidobacterium apri CCM 8605


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: Lentzea cavernae Fang et al. 2017

genus: Lentzea

order: Pseudonocardiales

species: Lentzea cavernae

description: Lentzea cavernae strain SYSU K10001 16S ribosomal RNA gene, partial sequence

description: ASM1465369v1 assembly for Lentzea cavernae CGMCC 4.7367


description: domain/bacteria

full scientific name: Galliscardovia ingluviei Pechar et al. 2017

genus: Galliscardovia

species: Galliscardovia ingluviei

description: Galliscardovia ingluviei strain RP51 16S-23S ribosomal RNA intergenic spacer and 23S ribosomal RNA gene, partial sequence

description: Galliscardovia ingluviei strain RP51 16S ribosomal RNA gene, partial sequence

description: Galliscardovia ingluviei strain CCM 8606 16S ribosomal RNA gene, partial sequence.

description: ASM1463568v1 assembly for Galliscardovia ingluviei CCM 8606


class: Desulfobacteria

description: domain/bacteria

family: Desulfobacteraceae

full scientific name: <I>Candidatus</I> Desulfamplus magnetomortis Lefèvre et al. 2011

genus: Desulfamplus

keyword: phylum/thermodesulfobacteriota

order: Desulfobacterales

phylum: Thermodesulfobacteriota

species: Desulfamplus magnetomortis

synonym: Desulfamplus magnetovallimortis

full scientific name: Desulfamplus magnetovallimortis Descamps et al. 2017

species: Desulfamplus magnetovallimortis

description: Delta proteobacterium BW-1 16S ribosomal RNA gene, partial sequence

description: Desulfamplus magnetomortis BW-1 assembly for Desulfamplus magnetovallimortis


description: domain/bacteria

family: Alteromonadaceae

full scientific name: Paraglaciecola hydrolytica Bech et al. 2017

genus: Paraglaciecola

order: Alteromonadales

species: Paraglaciecola hydrolytica

description: Paraglaciecola hydrolytica strain S66 16S ribosomal RNA gene, partial sequence

description: ASM156589v1 assembly for Paraglaciecola hydrolytica S66


class: Synergistia

description: domain/bacteria

family: Synergistaceae

full scientific name: <I>Thermanaerovibrio</I> Baena et al. 1999

genus: Thermanaerovibrio

keyword: phylum/synergistota

order: Synergistales

phylum: Synergistota

species: Thermanaerovibrio sp.

full scientific name: Thermanaerovibrio sp.

phylum: Synergistetes

description: Thermanaerovibrio sp. R101 partial 16S rRNA gene, strain R101


class: Clostridia

description: domain/bacteria

family: Lachnospiraceae

full scientific name: <I>Coprococcus</I> Holdeman and Moore 1974 (Approved Lists 1980)

genus: Coprococcus

phylum: Bacillota

species: Coprococcus sp.

full scientific name: Coprococcus sp.


description: domain/bacteria

full scientific name: Clostridium tepidum Dobritsa et al. 2017

genus: Clostridium

species: Clostridium tepidum

order: Anaeroplasmatales

phylum: Firmicutes

description: Clostridium tepidum strain IEH 97212 16S ribosomal RNA gene, partial sequence

description: ASM200834v1 assembly for Clostridium tepidum IEH 97212


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Paenibacillus konkukensis Im et al. 2017

genus: Paenibacillus

order: Caryophanales

species: Paenibacillus konkukensis

order: Bacillales

description: Paenibacillus konkukensis strain SK-3146 16S ribosomal RNA gene, partial sequence


class: Spirochaetia

description: domain/bacteria

family: Treponemataceae

full scientific name: Treponema rectale Staton et al. 2017

genus: Treponema

order: Spirochaetales

phylum: Spirochaetota

species: Treponema rectale

phylum: Spirochaetes

strain designation: CHPA

description: Treponema rectale strain CHPA 16S ribosomal RNA gene, partial sequence

description: ASM1420203v1 assembly for Treponema rectale DSM 103679

description: ASM1498418v1 assembly for Treponema rectale CHPA


description: domain/bacteria

family: Sphingomonadaceae

full scientific name: Sphingomonas spermidinifaciens Feng et al. 2017

genus: Sphingomonas

keyword: phylum/pseudomonadota

order: Sphingomonadales

species: Sphingomonas spermidinifaciens

synonym: Parastakelama spermidinifaciens

description: Sphingomonas spermidinifaciens strain 9NM-10 16S ribosomal RNA gene, partial sequence

description: ASM235148v1 assembly for Sphingomonas spermidinifaciens 9NM-10


description: domain/bacteria

family: Fastidiosibacteraceae

full scientific name: Cysteiniphilum litorale Liu et al. 2017

genus: Cysteiniphilum

order: Beggiatoales

species: Cysteiniphilum litorale

family: Francisellaceae

order: Thiotrichales

description: Cysteiniphilum litorale strain SYSU D3-2 16S ribosomal RNA gene, partial sequence

description: Cysteiniphilum litorale strain CGMCC 1.15758 16S ribosomal RNA gene, partial sequence.

description: ASM342816v1 assembly for Cysteiniphilum litorale DSM 101832

description: ASM1464357v1 assembly for Cysteiniphilum litorale CGMCC 1.15758


description: domain/bacteria

family: Roseobacteraceae

full scientific name: Roseobacter ponti Jung et al. 2017

genus: Roseobacter

order: Rhodobacterales

species: Roseobacter ponti

family: Rhodobacteraceae

description: Roseobacter ponti strain MM-7 16S ribosomal RNA gene, partial sequence

description: ASM1293221v1 assembly for Roseobacter ponti DSM 106830


description: domain/bacteria

family: Oscillospiraceae

full scientific name: Intestinimonas massiliensis Afouda et al. 2020

genus: Intestinimonas

keyword: phylum/bacillota

order: Eubacteriales

species: Intestinimonas massiliensis

synonym: Intestinimonas massiliensis

full scientific name: Intestinimonas massiliensis Durand et al. 2017

order: Clostridia, not assigned to order

description: Intestinimonas sp. GD2 partial 16S rRNA gene, strain GD2

description: Intestinimonas massiliensis assembly for Intestinimonas massiliensis (ex Afouda et al. 2020) GD2


culture collection no.: DSM 103514, CSUR P3110, Marseille-P3110

class: Erysipelotrichia

description: domain/bacteria

family: Erysipelotrichaceae

full scientific name: Traorella massiliensis Bonnet et al. 2019

genus: Traorella

order: Erysipelotrichales

species: Traorella massiliensis

synonym: Traorella massiliensis

full scientific name: Traorella massiliensis Mailhe et al. 2017

description: Traorella massiliensis partial 16S rRNA gene, type strain Marseille-P3110T

description: PRJEB16357 assembly for Traorella massiliensis Marseille-P3110


description: domain/bacteria

family: Peptoniphilaceae

full scientific name: Anaerococcus rubeinfantis corrig. Tidjani Alou et al. 2017

genus: Anaerococcus

order: Tissierellales

species: Anaerococcus rubeinfantis

synonym: Anaerococcus rubiinfantis

full scientific name: Anaerococcus rubeinfantis Tidjani Alou et al. 2017

order: Clostridiales

description: Anaerococcus rubiinfantis partial 16S rRNA gene, type strain mt16T

description: Anaerococcus rubiinfantis assembly for Anaerococcus rubeinfantis


class: Fibrobacteria

description: domain/bacteria

family: Fibrobacteraceae

full scientific name: Hallerella porci Wylensek et al. 2021

genus: Hallerella

order: Fibrobacterales

phylum: Fibrobacterota

species: Hallerella porci

full scientific name: Hallerella porci D. Wylensek

phylum: Fibrobacteres

strain designation: UW S4, UWS4

description: Hallerella porci strain UWS4 16S ribosomal RNA gene, partial sequence

description: ASM314888v1 assembly for Hallerella porci UWS4


description: domain/bacteria

family: Methylobacteriaceae

full scientific name: Enterovirga rhinocerotis Chen et al. 2017

genus: Enterovirga

order: Hyphomicrobiales

species: Enterovirga rhinocerotis

description: Enterovirga rhinocerotis strain YIM 100770 16S ribosomal RNA gene, partial sequence

description: ASM436395v1 assembly for Enterovirga rhinocerotis DSM 25903


class: Gammaproteobacteria

description: domain/bacteria

family: Pasteurellaceae

full scientific name: Haemophilus massiliensis Lo et al. 2017

genus: Haemophilus

order: Pasteurellales

species: Haemophilus massiliensis

description: Haemophilus massiliensis strain FF7 16S ribosomal RNA, partial sequence

description: ASM75299v2 assembly for Haemophilus massiliensis


description: domain/bacteria

family: Kribbellaceae

full scientific name: Kribbella soli Ozdemir-Kocak et al. 2017

genus: Kribbella

order: Propionibacteriales

phylum: Actinomycetota

species: Kribbella soli

order: Actinomycetales

description: Kribbella soli strain FMN22 16S ribosomal RNA gene, partial sequence

description: ASM433134v1 assembly for Kribbella soli KCTC 29219


class: Flavobacteriia

description: domain/bacteria

family: Weeksellaceae

full scientific name: Weeksella massiliensis Sankar et al. 2017

genus: Weeksella

keyword: phylum/bacteroidota

order: Flavobacteriales

phylum: Bacteroidota

species: Weeksella massiliensis

phylum: Bacteroidetes

description: Weeksella sp. FF8 partial 16S rRNA gene, isolate FF8

description: Weeksella massiliensis assembly for Weeksella massiliensis


class: Actinomycetes

description: domain/bacteria

family: Microbacteriaceae

full scientific name: Microbacterium lacusdiani Zhang et al. 2017

genus: Microbacterium

order: Micrococcales

species: Microbacterium lacusdiani

phylum: Actinobacteria

description: Microbacterium lacusdiani strain JXJ CY 01 16S ribosomal RNA, complete sequence

description: Microbacterium lacusdiani strain JXJ CY 01 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Rickettsiaceae

full scientific name: Occidentia massiliensis Mediannikov et al. 2017

genus: Occidentia

order: Rickettsiales

species: Occidentia massiliensis

description: Occidentia massiliensis strain Os18 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Kineosporiaceae

full scientific name: <I>Pseudokineococcus</I> Jurado et al. 2011

genus: Pseudokineococcus

order: Kineosporiales

species: Pseudokineococcus sp.

class: Actinobacteria

full scientific name: Pseudokineococcus sp.

description: Ornithinimicrobium sp. YIM KMY41 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Intrasporangiaceae

full scientific name: <I>Oryzihumus</I> Kageyama et al. 2005

genus: Oryzihumus

species: Oryzihumus sp.

full scientific name: Oryzihumus sp.

description: Oryzihumus sp. GT-L20 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: <I>Intrasporangium</I> Kalakoutskii et al. 1967 (Approved Lists 1980)

genus: Intrasporangium

species: Intrasporangium sp.

synonym: Humihabitans

synonym: Monashia

full scientific name: Intrasporangium sp.


description: domain/bacteria

full scientific name: Segeticoccus rhizosphaerae Lee and Whang 2020

genus: Segeticoccus

species: Segeticoccus rhizosphaerae

synonym: Ornithinicoccus soli

full scientific name: Ornithinicoccus sp.

description: Ornithinicoccus sp. YJ01 16S ribosomal RNA gene, partial sequence

description: ASM919272v1 assembly for Segeticoccus rhizosphaerae YJ01


class: Opitutia

description: domain/bacteria

family: Opitutaceae

full scientific name: Lacunisphaera limnophila Rast et al. 2025

genus: Lacunisphaera

order: Opitutales

phylum: Verrucomicrobiota

species: Lacunisphaera limnophila

class: Opitutae

full scientific name: Lacunisphaera limnophila Rast et al. 2017

phylum: Verrucomicrobia

description: Lacunisphaera limnophila strain IG16b 16S ribosomal RNA gene, partial sequence

description: ASM174683v1 assembly for Lacunisphaera limnophila IG16b


description: domain/bacteria

full scientific name: Lacunisphaera parvula Rast et al. 2025

species: Lacunisphaera parvula

full scientific name: Lacunisphaera parvula Rast et al. 2017

description: Lacunisphaera parvula strain IG15 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Lacunisphaera anatis Rast et al. 2017

species: Lacunisphaera anatis

description: Lacunisphaera anatis strain IG31 16S ribosomal RNA gene, partial sequence


family: Lachnospiraceae

full scientific name: Lachnospiraceae bacterium

genus: Lachnospiraceae

order: Not assigned to order

species: Lachnospiraceae bacterium


description: domain/bacteria

full scientific name: Leucobacter ruminantium Chun et al. 2017

genus: Leucobacter

species: Leucobacter ruminantium

description: Leucobacter ruminantium strain A2 16S ribosomal RNA gene, partial sequence

description: ASM1756570v1 assembly for Leucobacter ruminantium A2


description: domain/bacteria

family: Propionibacteriaceae

full scientific name: Naumannella cuiyingiana Tian et al. 2017

genus: Naumannella

species: Naumannella cuiyingiana

description: Naumannella cuiyingiana strain AFT2 16S ribosomal RNA gene, partial sequence

description: ASM1340830v1 assembly for Naumannella cuiyingiana DSM 103164


description: domain/bacteria

family: Nocardioidaceae

full scientific name: Nocardioides sonneratiae Li et al. 2017

genus: Nocardioides

species: Nocardioides sonneratiae

description: Nocardioides sonneratiae strain BGMRC0092 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium talmoniae Davidson et al. 2017

genus: Mycobacterium

order: Mycobacteriales

species: Mycobacterium talmoniae

description: Mycobacterium talmoniae strain NE-TNMC-100812 16S ribosomal RNA gene, partial sequence

description: ASM296700v1 assembly for Mycobacterium talmoniae ATCC BAA-2683


description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: Alloscardovia venturai Sechovcová et al. 2017

genus: Alloscardovia

order: Bifidobacteriales

species: Alloscardovia venturai

description: Alloscardovia venturai strain MOZIV/2 16S-23S ribosomal RNA intergenic spacer and 23S ribosomal RNA gene, partial sequence

description: Alloscardovia venturai strain MOZIV/2 16S ribosomal RNA gene, partial sequence

description: ASM4267660v1 assembly for Alloscardovia venturai CCM 8604


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: Pseudonocardia nigra Trujillo et al. 2017

genus: Pseudonocardia

order: Pseudonocardiales

species: Pseudonocardia nigra

description: Pseudonocardia nigra strain ATK03 16S ribosomal RNA gene, partial sequence

description: ASM1939635v1 assembly for Pseudonocardia nigra DSM 104088


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Mesonia maritima corrig. Sung et al. 2017

genus: Mesonia

species: Mesonia maritima

synonym: Mesonia maritimus

full scientific name: Mesonia maritima Sung et al. 2017

description: Mesonia maritima strain 15-S14-6 16S ribosomal RNA gene, partial sequence

description: Mesonia maritima strain NCAIM B.02633 16S ribosomal RNA gene, partial sequence.

description: ASM4243389v1 assembly for Mesonia maritima NCAIM B.02633

description: ASM4268396v1 assembly for Mesonia maritima NCAIM B.02633

description: ASM3145403v1 assembly for Mesonia maritima DSM 102814


description: domain/bacteria

family: Micrococcaceae

full scientific name: Micrococcoides hystricis Tóth et al. 2017

genus: Micrococcoides

species: Micrococcoides hystricis

description: Micrococcoides hystricis strain TSL3 16S ribosomal RNA gene, partial sequence

description: Micrococcoides hystricis strain NCAIM B.02604 16S ribosomal RNA gene, partial sequence.

description: ASM4243421v1 assembly for Micrococcoides hystricis NCAIM B.02604


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces sediminis Ay et al. 2018

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces sediminis

description: Streptomyces sediminis strain MKSP12 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Nocardiaceae

full scientific name: Rhodococcus psychrotolerans Silva et al. 2018

genus: Rhodococcus

species: Rhodococcus psychrotolerans

full scientific name: Rhodococcus psychrotolerans

description: Rhodococcus psychrotolerans 16S ribosomal RNA gene, partial sequence


class: Bacilli

description: domain/bacteria

family: Cytobacillaceae

full scientific name: Neobacillus notoginsengisoli (Zhang et al. 2017) Patel and Gupta 2020

genus: Neobacillus

order: Caryophanales

species: Neobacillus notoginsengisoli

synonym: Bacillus notoginsengisoli

family: Bacillaceae

order: Bacillales

description: Neobacillus notoginsengisoli strain SYP-B691 16S ribosomal RNA gene, partial sequence

description: ASM351568v1 assembly for Neobacillus notoginsengisoli JCM 30743


description: domain/bacteria

family: Peptococcaceae

full scientific name: Desulfocucumis palustris Watanabe et al. 2017

genus: Desulfocucumis

order: Eubacteriales

species: Desulfocucumis palustris

description: Desulfocucumis palustris gene for 16S ribosomal RNA, partial sequence, strain: NAW-5

description: ASM293387v1 assembly for Desulfocucumis palustris NAW-5


description: domain/bacteria

full scientific name: Pseudobacillus wudalianchiensis (Liu et al. 2017) Verma et al. 2024

genus: Pseudobacillus

species: Pseudobacillus wudalianchiensis

synonym: Bacillus wudalianchiensis

full scientific name: Bacillus wudalianchiensis Liu et al. 2017

genus: Bacillus

species: Bacillus wudalianchiensis

description: Bacillus wudalianchiensis strain FJAT-27215 16S ribosomal RNA gene, partial sequence

description: ASM168501v1 assembly for Pseudobacillus wudalianchiensis FJAT-27215


description: domain/bacteria

full scientific name: Cytobacillus praedii (Liu et al. 2017) Patel and Gupta 2020

genus: Cytobacillus

species: Cytobacillus praedii

synonym: Bacillus praedii

description: Cytobacillus praedii strain FJAT-25547 16S ribosomal RNA gene, partial sequence

description: ASM143960v1 assembly for Cytobacillus praedii FJAT-25547


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Limosilactobacillus caviae (Killer et al. 2017) Zheng et al. 2020

genus: Limosilactobacillus

order: Lactobacillales

species: Limosilactobacillus caviae

synonym: Lactobacillus caviae

description: Limosilactobacillus caviae strain MOZM2 16S ribosomal RNA gene, partial sequence

description: Lactobacillus caviae strain CCM 8609 16S ribosomal RNA gene, partial sequence.

description: ASM1463590v1 assembly for Limosilactobacillus caviae CCM 8609

description: ASM5043346v1 assembly for Limosilactobacillus caviae DSM 100239

description: Limosilactobacillus caviae DSM 100239


class: Oligoflexia

description: domain/bacteria

family: Silvanigrellaceae

full scientific name: Silvanigrella aquatica Hahn et al. 2017

genus: Silvanigrella

order: Silvanigrellales

phylum: Pseudomonadota

species: Silvanigrella aquatica

description: Silvanigrella aquatica strain MWH-Nonnen-W8red 16S ribosomal RNA gene, partial sequence.

assembly level: chromosome

description: ASM190797v2 assembly for Silvanigrella aquatica MWH-Nonnen-W8red


class: Alphaproteobacteria

description: domain/bacteria

family: Sphingomonadaceae

full scientific name: Blastomonas marina Meng et al. 2017

genus: Blastomonas

order: Sphingomonadales

species: Blastomonas marina

synonym: Pseudoblastomonas marina

phylum: Proteobacteria

description: Blastomonas marina strain SSR2A-4-2 16S ribosomal RNA gene, partial sequence

description: ASM1464165v1 assembly for Pseudoblastomonas marina CGMCC 1.15297


description: domain/bacteria

family: Lysobacteraceae

full scientific name: Stenotrophomonas bentonitica Sánchez-Castro et al. 2017

genus: Stenotrophomonas

order: Lysobacterales

species: Stenotrophomonas bentonitica

synonym: Pseudostenotrophomonas bentonitica

order: Pseudomonadales

description: Stenotrophomonas sp. BIIR7 partial 16S rRNA gene, isolate BIIR7

description: ASM1318591v1 assembly for Stenotrophomonas bentonitica DSM 103927


description: domain/bacteria

family: Desulfosarcinaceae

full scientific name: Desulfosarcina widdelii Watanabe et al. 2017

genus: Desulfosarcina

order: Desulfobacterales

phylum: Thermodesulfobacteriota

species: Desulfosarcina widdelii

class: Deltaproteobacteria

family: Desulfobacteraceae

description: Desulfosarcina widdelii gene for 16S rRNA, partial sequence

description: ASM968896v1 assembly for Desulfosarcina widdelii PP31


description: domain/bacteria

full scientific name: Desulfosarcina alkanivorans Watanabe et al. 2017

species: Desulfosarcina alkanivorans

description: Desulfosarcina alkanivorans gene for 16S ribosomal RNA, partial sequence

description: ASM968894v1 assembly for Desulfosarcina alkanivorans PL12


description: domain/bacteria

family: Kribbellaceae

full scientific name: Kribbella sindirgiensis Ozdemir-Kocak et al. 2018

genus: Kribbella

order: Propionibacteriales

species: Kribbella sindirgiensis

order: Actinomycetales

description: Kribbella sindirgiensis strain FSN23 16S ribosomal RNA gene, partial sequence

description: ASM433143v1 assembly for Kribbella sindirgiensis DSM 27082


description: domain/bacteria

family: Orbaceae

full scientific name: Gilliamella bombi Praet et al. 2017

genus: Gilliamella

order: Orbales

species: Gilliamella bombi

description: Gilliamella sp. R-54662 partial 16S rRNA gene, strain LMG29879, isolate R-54662


description: domain/bacteria

full scientific name: Gilliamella bombicola Praet et al. 2017

species: Gilliamella bombicola

description: Gilliamella sp. R-53248 partial 16S rRNA gene, strain LMG 28359, isolate R-53248

description: IMG-taxon 2617270739 annotated assembly for Gilliamella bombicola R-53248


description: domain/bacteria

full scientific name: Gilliamella intestini Praet et al. 2017

species: Gilliamella intestini

description: Gilliamella sp. R-53144 partial 16S rRNA gene, strain LMG 28358, isolate R-53144

description: IMG-taxon 2617270738 annotated assembly for Gilliamella intestini R-53144


description: domain/bacteria

family: Microbacteriaceae

full scientific name: Microbacterium zeae Gao et al. 2017

genus: Microbacterium

order: Micrococcales

species: Microbacterium zeae

description: Microbacterium zeae strain 1204 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Oceanospirillaceae

full scientific name: Neptuniibacter marinus Diéguez et al. 2017

genus: Neptuniibacter

order: Oceanospirillales

species: Neptuniibacter marinus

description: Neptuniibacter sp. CECT 8938 partial 16S rRNA gene, type strain CECT 8938T

description: ASM159772v1 assembly for Neptuniibacter marinus ATR 1.1


description: domain/bacteria

full scientific name: Neptuniibacter pectenicola Diéguez et al. 2017

species: Neptuniibacter pectenicola

description: Neptuniibacter sp. CECT 8936 partial 16S rRNA gene, type strain CECT 8936T

description: ASM159773v1 assembly for Neptuniibacter pectenicola LFT 1.8


description: domain/bacteria

family: Mycobacteriaceae

full scientific name: Mycobacterium eburneum Nouioui et al. 2017

genus: Mycobacterium

order: Mycobacteriales

species: Mycobacterium eburneum

description: Mycobacterium eburneum 16S ribosomal RNA gene, partial sequence

description: ASM435490v1 assembly for Mycobacterium eburneum DSM 44358


class: Thermoleophilia

description: domain/bacteria

family: Conexibacteraceae

full scientific name: Conexibacter stalactiti Lee 2017

genus: Conexibacter

order: Solirubrobacterales

species: Conexibacter stalactiti

description: Conexibacter sp. YC2-25 partial 16S rRNA gene, strain YC2-25

description: ASM3354207v1 assembly for Conexibacter stalactiti KCTC 39840

description: ASM3596776v1 assembly for Conexibacter stalactiti KCTC 39840


description: domain/bacteria

full scientific name: Mycobacterium aquaticum Hashemi Shahraki et al. 2017

species: Mycobacterium aquaticum

description: Mycobacterium aquaticum 16S ribosomal RNA gene, partial sequence

description: ASM208648v1 assembly for Mycobacterium aquaticum RW6

description: Mycobacterium sp. RW6 strain RW6


description: domain/bacteria

family: Actinomycetaceae

full scientific name: Actinomyces gaoshouyii Meng et al. 2017

genus: Actinomyces

species: Actinomyces gaoshouyii

description: Actinomyces gaoshouyii 16S ribosomal RNA gene, partial sequence

description: ASM1464649v1 assembly for Actinomyces gaoshouyii CGMCC 4.7372

description: ASM207217v1 assembly for Actinomyces gaoshouyii pika_113


description: domain/bacteria

family: Nocardiaceae

full scientific name: Nocardia heshunensis Huang et al. 2017

genus: Nocardia

species: Nocardia heshunensis

description: Nocardia sp. strain CFH S0067 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Promicromonosporaceae

full scientific name: Promicromonospora callitridis Kaewkla and Franco 2017

genus: Promicromonospora

species: Promicromonospora callitridis

description: Promicromonospora callitridis 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Saonia flava Fagervold et al. 2017

genus: Saonia

order: Flavobacteriales

species: Saonia flava

description: Flavobacteriaceae bacterium MOLA 117 partial 16S rRNA gene, culture collection MOLA:117

description: ASM1192779v1 assembly for Saonia flava DSM 29762


class: Chroococcophyceae

description: domain/bacteria

family: Microcystaceae

full scientific name: <I>Synechocystis</I> Sauvageau 1892

genus: Synechocystis

keyword: phylum/cyanobacteriota

order: Chroococcales

phylum: Cyanobacteriota

species: Synechocystis sp.

class: Cyanophyceae

family: Merismopediaceae

full scientific name: Synechocystis sp.

order: Synechococcales

phylum: Cyanobacteria


description: domain/bacteria

family: Nodulariaceae

full scientific name: Nodularia spumigena Mertens ex Bornet and Flahault 1886

genus: Nodularia

order: Nostocales

species: Nodularia spumigena

class: Cyanobacteria, not assigned to class

family: Cyanobacteria, not assigned to family

full scientific name: Nodularia spumigena

order: Not assigned to order


description: domain/bacteria

full scientific name: Flavobacterium gossypii Kämpfer et al. 2017

genus: Flavobacterium

species: Flavobacterium gossypii

description: Flavobacterium gossypii 16S ribosomal RNA gene, partial sequence

description: Flavobacterium gossypii strain CCM 8610 16S ribosomal RNA gene, partial sequence.

description: ASM1413849v1 assembly for Flavobacterium gossypii DSM 100397

description: ASM4265092v1 assembly for Flavobacterium gossypii CCM 8610


class: Cytophagia

description: domain/bacteria

family: Cyclobacteriaceae

full scientific name: Echinicola sediminis Lee et al. 2017

genus: Echinicola

order: Cytophagales

species: Echinicola sediminis

description: Echinicola sediminis 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Vibrionaceae

full scientific name: Vibrio zhuhaiensis Jin et al. 2013

genus: Vibrio

order: Vibrionales

species: Vibrio zhuhaiensis

order: Vibrionales, not validated

description: Vibrio sp. E20124 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Vibrio zhuhaiensis strain E20121 16S ribosomal RNA gene, partial sequence

description: Vibrio zhuhaiensis DSM 25602 gene for 16S ribosomal RNA, partial sequence.


description: domain/bacteria

description: Vibrio sp. E20122 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Piscirickettsiaceae

full scientific name: <I>Cycloclasticus</I> Dyksterhouse et al. 1995

genus: Cycloclasticus

order: Beggiatoales

species: Cycloclasticus sp.

full scientific name: Cycloclasticus sp.

order: Thiotrichales

description: Cycloclasticus sp. TK-8 16S ribosomal RNA gene, partial sequence

description: IMG-taxon 2695421048 annotated assembly for Cycloclasticus pugetii DSM 27168


class: Clostridia

description: domain/bacteria

family: Heliobacteriaceae

full scientific name: Heliorestis acidaminivorans Asao et al. 2021

genus: Heliorestis

order: Eubacteriales

phylum: Bacillota

species: Heliorestis acidaminivorans

full scientific name: Heliorestis acidaminivorans Asao et al. 2012

order: Clostridiales

strain designation: NCMAB119, HR10B

description: Heliorestis acidaminivorans strain HR10B 16S ribosomal RNA gene, partial sequence

description: ASM893395v1 assembly for Heliorestis acidaminivorans DSM 24790


description: domain/bacteria

full scientific name: Arenibacter algicola Gutiérrez et al. 2021

genus: Arenibacter

species: Arenibacter algicola

full scientific name: Arenibacter algicola Gutierrez et al. 2014

description: Arenibacter algicola strain TG409 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: <I>Gaetbulibacter</I> Jung et al. 2005

genus: Gaetbulibacter

species: Gaetbulibacter sp.

full scientific name: Gaetbulibacter sp.


description: domain/bacteria

full scientific name: <I>Cyclobacterium</I> Raj and Maloy 1990

genus: Cyclobacterium

species: Cyclobacterium sp.

full scientific name: Cyclobacterium sp.


description: domain/bacteria

full scientific name: <I>Polaribacter</I> Gosink et al. 1998

genus: Polaribacter

species: Polaribacter sp.

full scientific name: Polaribacter sp.

description: Bacterium W15S19a 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: <I>Marixanthomonas</I> Romanenko et al. 2007

genus: Marixanthomonas

species: Marixanthomonas sp.

full scientific name: Marixanthomonas sp.


description: domain/bacteria

full scientific name: <I>Mesonia</I> Nedashkovskaya et al. 2003

genus: Mesonia

species: Mesonia sp.

full scientific name: Mesonia sp.


description: domain/bacteria

family: Roseobacteraceae

full scientific name: <I>Roseivivax</I> Suzuki et al. 1999

genus: Roseivivax

order: Rhodobacterales

species: Roseivivax sp.

family: Rhodobacteraceae

full scientific name: Roseivivax sp.


description: domain/bacteria

family: Halomonadaceae

full scientific name: <I>Modicisalibacter</I> Ben Ali Gam et al. 2007

genus: Modicisalibacter

species: Modicisalibacter sp.

full scientific name: Modicisalibacter sp.


description: domain/bacteria

family: Kangiellaceae

full scientific name: <I>Kangiella</I> Yoon et al. 2004

genus: Kangiella

species: Kangiella sp.

full scientific name: Kangiella sp.


description: domain/bacteria

full scientific name: <I>Oceanicola</I> Cho and Giovannoni 2004

genus: Oceanicola

species: Oceanicola sp.

full scientific name: Oceanicola sp.


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Levilactobacillus cerevisiae (Koob et al. 2017) Zheng et al. 2020

genus: Levilactobacillus

order: Lactobacillales

species: Levilactobacillus cerevisiae

synonym: Lactobacillus cerevisiae

phylum: Firmicutes

description: Levilactobacillus cerevisiae 16S ribosomal RNA gene, partial sequence

description: ASM394624v1 assembly for Levilactobacillus cerevisiae DSM 100836


description: domain/bacteria

family: Bacillaceae

full scientific name: Halalkalibacter kiskunsagensis (Borsodi et al. 2017) Joshi et al. 2022

genus: Halalkalibacter

order: Caryophanales

species: Halalkalibacter kiskunsagensis

synonym: Bacillus kiskunsagensis

synonym: Alkalihalobacillus kiskunsagensis

description: Bacillus sp. B16-24 partial 16S rRNA gene, strain B16-24

description: Bacillus kiskunsagensis strain NCAIM B.02610 16S ribosomal RNA gene, partial sequence.

description: ASM3702755v1 assembly for Halalkalibacter kiskunsagensis DSM 29791

description: ASM4243375v1 assembly for Halalkalibacter kiskunsagensis NCAIM B.02610


description: domain/bacteria

family: Hymenobacteraceae

full scientific name: Pontibacter rhizosphera Raichand et al. 2011

genus: Pontibacter

species: Pontibacter rhizosphera

description: Pontibacter rhizosphera strain IMTB-1969 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Echinicola shivajiensis Srinivas et al. 2012

genus: Echinicola

species: Echinicola shivajiensis

description: Echinicola shivajiensis partial 16S rRNA gene, type strain AK12

description: ASM1864216v1 assembly for Echinicola shivajiensis AK12


description: domain/bacteria

full scientific name: Vreelandella lionensis de la Haba et al. 2024

genus: Vreelandella

order: Oceanospirillales

species: Vreelandella lionensis

synonym: Halomonas lionensis

full scientific name: Halomonas lionensis Gaboyer et al. 2014

genus: Halomonas

species: Halomonas lionensis

description: Halomonas lionensis strain RHS90 16S ribosomal RNA, partial sequence

description: ASM208729v1 assembly for Vreelandella lionensis RHS90


description: domain/bacteria

full scientific name: Metabacillus iocasae (Wang et al. 2017) Gupta et al. 2020

genus: Metabacillus

species: Metabacillus iocasae

synonym: Priestia iocasae

synonym: Bacillus iocasae

order: Bacillales

description: Metabacillus iocasae 16S ribosomal RNA gene, partial sequence

description: Bacillus iocasae strain CGMCC 1.16030 16S ribosomal RNA gene, partial sequence.

description: ASM1690907v1 assembly for Priestia iocasae DSM 104297


description: domain/bacteria

full scientific name: Secundilactobacillus silagincola (Tohno et al. 2017) Zheng et al. 2020

genus: Secundilactobacillus

species: Secundilactobacillus silagincola

synonym: Lactobacillus silagincola

description: Lactobacillus silagincola gene for 16S ribosomal RNA, partial sequence, strain: IWT5

description: ASM258340v1 assembly for Secundilactobacillus silagincola IWT5


description: domain/bacteria

full scientific name: Secundilactobacillus pentosiphilus (Tohno et al. 2017) Zheng et al. 2020

species: Secundilactobacillus pentosiphilus

synonym: Lactobacillus pentosiphilus

description: Lactobacillus pentosiphilus gene for 16S ribosomal RNA, partial sequence, strain: IWT25

description: ASM221798v1 assembly for Secundilactobacillus pentosiphilus IWT25


description: domain/bacteria

family: Streptococcaceae

full scientific name: Streptococcus ruminantium Tohya et al. 2017

genus: Streptococcus

species: Streptococcus ruminantium

description: Streptococcus ruminantium GUT-187 gene for 16S ribosomal RNA, partial sequence

description: ASM360997v1 assembly for Streptococcus ruminantium GUT187T


class: Spirochaetia

description: domain/bacteria

family: Spirochaetaceae

full scientific name: Oceanispirochaeta sediminicola Subhash and Lee 2017

genus: Oceanispirochaeta

order: Spirochaetales

phylum: Spirochaetota

species: Oceanispirochaeta sediminicola

description: Spirochaeta sp. SY2 partial 16S rRNA gene, strain SY2


class: Thermodesulfobacteriota, not assigned to class

description: domain/bacteria

family: Thermodesulfobacteriota, not assigned to family

full scientific name: Thermosulfuriphilus ammonigenes Slobodkina et al. 2017

genus: Thermosulfuriphilus

order: Thermodesulfobacteriota, not assigned to order

species: Thermosulfuriphilus ammonigenes

class: Thermodesulfobacteria

family: Thermodesulfobacteriaceae

order: Thermodesulfobacteria, not assigned to order

phylum: Thermodesulfobacteria

description: Thermosulfuriphilus ammonigenes 16S ribosomal RNA gene, partial sequence

description: ASM1120745v1 assembly for Thermosulfuriphilus ammonigenes ST65

description: ASM1376112v1 assembly for Thermosulfuriphilus ammonigenes DSM 102941


class: Desulfovibrionia

description: domain/bacteria

family: Desulfovibrionaceae

full scientific name: Pseudodesulfovibrio senegalensis (Thioye et al. 2017) Galushko and Kuever 2021

genus: Pseudodesulfovibrio

order: Desulfovibrionales

species: Pseudodesulfovibrio senegalensis

synonym: Salidesulfovibrio senegalensis

synonym: Desulfovibrio senegalensis

synonym: Paradesulfovibrio senegalensis

description: Pseudodesulfovibrio senegalensis strain BlaC1 16S ribosomal RNA gene, partial sequence

description: ASM883022v1 assembly for Pseudodesulfovibrio senegalensis DSM 101509


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Faecalimonas canis Yamamoto et al. 2026

genus: Faecalimonas

species: Faecalimonas canis

synonym: Glucerabacter canisensis

synonym: Gluceribacter canis

full scientific name: Glucerabacter canisensis Kawata et al. 2017

genus: Glucerabacter

species: Glucerabacter canisensis

description: Glucerabacter canisensis gene for 16S ribosomal RNA, partial sequence


culture collection no.: DSM 103669, Marseille-P2953

description: domain/bacteria

family: Clostridiaceae

full scientific name: Clostridium merdae Ndongo et al. 2017

genus: Clostridium

species: Clostridium merdae

synonym: Clostridium merdae

order: Anaeroplasmatales

description: Clostridium merdae partial 16S rRNA gene, type strain Marseille-P2953T

description: PRJEB20369 assembly for Clostridium merdae Marseille-P2953


description: domain/bacteria

family: Spirulinaceae

full scientific name: <I>Halospirulina</I> Nübel et al. 2000

genus: Halospirulina

order: Spirulinales

species: Halospirulina sp.

full scientific name: Halospirulina sp.


description: domain/bacteria

family: Paracoccaceae

full scientific name: <I>Albidovulum</I> Albuquerque et al. 2003

genus: Albidovulum

species: Albidovulum sp.

synonym: Defluviimonas

full scientific name: Albidovulum sp.

description: Albidovulum sp. S1K1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Pontivivens marinum (Chernikova et al. 2017) Huang et al. 2024

genus: Pontivivens

species: Pontivivens marinum

synonym: Monaibacterium marinum

full scientific name: Monaibacterium marinum Chernikova et al. 2017

genus: Monaibacterium

species: Monaibacterium marinum

description: Monaibacterium marinum strain C7 16S ribosomal RNA gene, partial sequence

description: IMG-taxon 2710264757 annotated assembly for Pontivivens marinum C7


class: Sphingobacteriia

description: domain/bacteria

family: Sphingobacteriaceae

full scientific name: Sphingobacterium rhinocerotis Li et al. 2015

genus: Sphingobacterium

order: Sphingobacteriales

species: Sphingobacterium rhinocerotis

full scientific name: Sphingobacterium rhinocerotis Li et al. 2017

order: Flavobacteriales

description: Sphingobacterium rhinocerotis strain YIM 101302 16S ribosomal RNA gene, partial sequence


class: Gammaproteobacteria

description: domain/bacteria

family: Thioprofundaceae

full scientific name: Sulfurivermis fontis Kojima et al. 2017

genus: Sulfurivermis

order: Chromatiales

species: Sulfurivermis fontis

description: Sulfurivermis fontis gene for 16S ribosomal RNA, partial sequence

description: ASM400124v1 assembly for Sulfurivermis fontis JG42


description: domain/bacteria

family: Hyphomonadaceae

full scientific name: <I>Litorimonas</I> Jung et al. 2011

genus: Litorimonas

order: Caulobacterales

species: Litorimonas sp.

full scientific name: Litorimonas sp.


description: domain/bacteria

description: Hyphomonadaceae bacterium GSW-26 partial 16S rRNA gene, strain GSW-26


description: domain/bacteria

full scientific name: <I>Ornithinibacillus</I> Mayr et al. 2006

genus: Ornithinibacillus

species: Ornithinibacillus sp.

full scientific name: Ornithinibacillus sp.


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Citrobacter portucalensis Ribeiro et al. 2017

genus: Citrobacter

order: Enterobacterales

species: Citrobacter portucalensis

order: Enterobacteriales, not validated

description: ASM204288v1 assembly for Citrobacter portucalensis A60


class: Halobacteria

description: domain/archaea

family: Haloarculaceae

full scientific name: <I>Halorhabdus</I> Wainø et al. 2000

genus: Halorhabdus

order: Halobacteriales

phylum: Methanobacteriota

species: Halorhabdus sp.

full scientific name: Halorhabdus sp.

phylum: Euryarchaeota

description: Halorhabdus sp. S21 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Halomonadaceae

full scientific name: <I>Aidingimonas</I> Wang et al. 2009

genus: Aidingimonas

species: Aidingimonas sp.

full scientific name: Aidingimonas sp.

description: Aidingimonas sp. YIM 95754 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Erythrobacteraceae

full scientific name: Alteraurantiacibacter lauratis (Yuan et al. 2017) Wang et al. 2025

genus: Alteraurantiacibacter

order: Sphingomonadales

species: Alteraurantiacibacter lauratis

synonym: Altererythrobacter lauratis

full scientific name: Altererythrobacter lauratis Yuan et al. 2017

genus: Altererythrobacter

species: Altererythrobacter lauratis

description: Altererythrobacter lauratis strain YIM 75003 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Alteraurantiacibacter palmitatis (Yuan et al. 2017) Wang et al. 2025

species: Alteraurantiacibacter palmitatis

synonym: Altererythrobacter palmitatis

full scientific name: Altererythrobacter palmitatis Yuan et al. 2017

species: Altererythrobacter palmitatis

description: Altererythrobacter palmitatis strain YIM 75004 16S ribosomal RNA gene, partial sequence


class: Actinomycetes

description: domain/bacteria

family: Micrococcaceae

full scientific name: <I>Zhihengliuella</I> Zhang et al. 2007

genus: Zhihengliuella

keyword: phylum/actinomycetota

order: Micrococcales

phylum: Actinomycetota

species: Zhihengliuella sp.

class: Actinobacteria

full scientific name: Zhihengliuella sp.

order: Actinomycetales


class: Alphaproteobacteria

family: Alphaproteobacteria, not assigned to family

full scientific name: Gottschalkia methylica Firsova et al. 2010

genus: Gottschalkia

order: Clostridiales

species: Gottschalkia methylica

description: Hyphomicrobiaceae bacterium DM15 16S ribosomal RNA gene, partial sequence


class: Flavobacteriia

description: domain/bacteria

family: Flavobacteriaceae

full scientific name: <I>Algibacter</I> Nedashkovskaya et al. 2004

genus: Algibacter

phylum: Bacteroidota

species: Algibacter sp.

synonym: Arenitalea

synonym: Pontirhabdus

full scientific name: Pontirhabdus sp.

genus: Pontirhabdus

species: Pontirhabdus sp.

description: Pontirhabdus sp. sw096 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Alteromonadaceae

full scientific name: <I>Marinobacterium</I> González et al. 1997

genus: Marinobacterium

order: Alteromonadales

species: Marinobacterium sp.

full scientific name: Marinobacterium sp.

description: Marinobacterium sp. KW44 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Roseobacteraceae

full scientific name: <I>Salipiger</I> Martínez-Cánovas et al. 2004

genus: Salipiger

order: Rhodobacterales

species: Salipiger sp.

synonym: Citreicella

synonym: Pelagibaca

synonym: Paraphaeobacter

synonym: Thiobacimonas

family: Rhodobacteraceae

full scientific name: Salipiger sp.

description: Salipiger sp. BH85027 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Spongiibacteraceae

full scientific name: <I>Spongiibacter</I> Graeber et al. 2008

genus: Spongiibacter

order: Cellvibrionales

species: Spongiibacter sp.

full scientific name: Spongiibacter sp.

order: Pseudomonadales

description: Bacteroidetes bacterium AKB-K1-255 partial 16S rRNA gene, type strain K1-255T


description: domain/bacteria


class: Chitinophagia

description: domain/bacteria

family: Chitinophagaceae

full scientific name: <I>Sediminibacterium</I> Qu and Yuan 2008

genus: Sediminibacterium

order: Chitinophagales

species: Sediminibacterium sp.

synonym: Asinibacterium

synonym: Vibrionimonas

full scientific name: Sediminibacterium sp.

phylum: Bacteroidetes

description: Sediminibacterium sp. I-32 partial 16S rRNA gene, strain I-32


description: domain/bacteria

family: Ectothiorhodospiraceae

full scientific name: <I>Alkalilimnicola</I> corrig. Yakimov et al. 2001

genus: Alkalilimnicola

species: Alkalilimnicola sp.

synonym: Alcalilimnicola

full scientific name: Alkalilimnicola sp.


description: domain/bacteria

full scientific name: Flavobacterium degerlachei Van Trappen et al. 2004

genus: Flavobacterium

species: Flavobacterium degerlachei

description: Flavobacterium degerlachei gene for 16S rRNA, partial sequence, strain: NBRC 102677.


description: domain/bacteria

family: Cellvibrionaceae

full scientific name: <I>Teredinibacter</I> Distel et al. 2002

genus: Teredinibacter

species: Teredinibacter sp.

synonym: Teredinobacter

full scientific name: Teredinibacter sp.

order: Cellvibrionaceae, not assigned to order


description: domain/bacteria

full scientific name: <I>Joostella</I> Quan et al. 2008

genus: Joostella

species: Joostella sp.

full scientific name: Joostella sp.

description: Flavobacteriaceae bacterium MDSW-26 partial 16S rRNA gene, strain MDSW-26


description: domain/bacteria

full scientific name: <I>Celeribacter</I> Ivanova et al. 2010

genus: Celeribacter

species: Celeribacter sp.

synonym: Huaishuia

synonym: Vadicella

full scientific name: Huaishuia sp.

genus: Huaishuia

species: Huaishuia sp.


description: domain/bacteria

family: Oceanospirillaceae

full scientific name: <I>Nitrincola</I> Dimitriu et al. 2005

genus: Nitrincola

order: Oceanospirillales

species: Nitrincola sp.

full scientific name: Nitrincola sp.

description: Nitrincola sp. E-038 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Nitrincola sp. E-048 16S ribosomal RNA gene, partial sequence


class: Opitutia

description: domain/bacteria

family: Cerasicoccaceae

full scientific name: Cerasicoccus maritimus Yoon et al. 2010

genus: Cerasicoccus

order: Puniceicoccales

species: Cerasicoccus maritimus

class: Opitutae

family: Puniceicoccaceae

description: Cerasicoccus maritimus gene for 16S rRNA, partial sequence, strain: YM31-114


description: domain/bacteria

family: Geodermatophilaceae

full scientific name: Blastococcus xanthinilyticus Hezbri et al. 2018

genus: Blastococcus

order: Geodermatophilales

species: Blastococcus xanthinilyticus

phylum: Actinobacteria

description: Blastococcus sp. BMG 862 partial 16S rRNA gene, strain BMG 862

description: ASM812483v1 assembly for Blastococcus xanthinilyticus DSM 46842


class: Verrucomicrobiia

description: domain/bacteria

family: Verrucomicrobiaceae

full scientific name: <I>Luteolibacter</I> Yoon et al. 2008

genus: Luteolibacter

order: Verrucomicrobiales

phylum: Verrucomicrobiota

species: Luteolibacter sp.

class: Verrucomicrobiae

full scientific name: Luteolibacter sp.

description: Verrucomicrobiaceae bacterium CHC12 partial 16S rRNA gene, strain CHC12


class: Verrucomicrobia, not assigned to class

family: Verrucomicrobia, not assigned to family

full scientific name: Candidatus Rhizospheria sp.

genus: Candidatus Rhizospheria

order: Not assigned to order

phylum: Verrucomicrobia

species: Candidatus Rhizospheria sp.

strain designation: CHC 8

description: Verrucomicrobiaceae bacterium CHC8 partial 16S rRNA gene, strain CHC8


description: domain/bacteria

family: Pseudoalteromonadaceae

full scientific name: Pseudoalteromonas xishaensis Luo et al. 2013

genus: Pseudoalteromonas

phylum: Pseudomonadota

species: Pseudoalteromonas xishaensis

description: Pseudoalteromonas sp. E418 16S ribosomal RNA gene, partial sequence


class: Clostridia

description: domain/bacteria

family: Halobacteroidaceae

full scientific name: Halanaerocella petrolearia Gales et al. 2025

genus: Halanaerocella

order: Halanaerobiales

species: Halanaerocella petrolearia

full scientific name: Halanaerocella petrolearia Gales et al. 2011

description: Halanaerocella petrolearia strain S200 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Cerasicoccus frondis Yoon et al. 2010

species: Cerasicoccus frondis

description: Cerasicoccus frondis gene for 16S rRNA, partial sequence, strain: YM31-066


class: Bacilli

description: domain/bacteria

family: Caryophanaceae

full scientific name: <I>Planococcus</I> Migula 1894 (Approved Lists 1980)

genus: Planococcus

order: Caryophanales

species: Planococcus sp.

synonym: Planomicrobium

full scientific name: Planococcus sp.

order: Bacillales


description: domain/bacteria

full scientific name: <I>Chryseomicrobium</I> Arora et al. 2011

genus: Chryseomicrobium

species: Chryseomicrobium sp.

full scientific name: Chryseomicrobium sp.


description: domain/bacteria

family: Microbacteriaceae

full scientific name: <I>Mycetocola</I> Tsukamoto et al. 2001

genus: Mycetocola

order: Micrococcales

species: Mycetocola sp.

full scientific name: Mycetocola sp.


description: domain/bacteria

family: Dermacoccaceae

full scientific name: <I>Yimella</I> Tang et al. 2010

genus: Yimella

species: Yimella sp.

full scientific name: Yimella sp.

order: Actinomycetales


description: domain/bacteria

family: Bacillaceae

full scientific name: Paraliobacillus sediminis Cao et al. 2017

genus: Paraliobacillus

species: Paraliobacillus sediminis

description: Paraliobacillus sediminis strain 126C4 16S ribosomal RNA gene, partial sequence

description: ASM342605v1 assembly for Paraliobacillus sediminis 126C4


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Paenibacillus lacus Chen et al. 2017

genus: Paenibacillus

species: Paenibacillus lacus

description: Paenibacillus sp. Agd-32 partial 16S rRNA gene, strain Agd-32


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Abyssicoccus albus Jiang et al. 2016

genus: Abyssicoccus

species: Abyssicoccus albus

synonym: Auricoccus indicus

genus: Auricoccus

species: Auricoccus indicus

description: Abyssicoccus albus strain S31 16S ribosomal RNA gene, partial sequence

description: ASM198957v1 assembly for Abyssicoccus albus S31


class: Planctomycetia

description: domain/bacteria

family: Pirellulaceae

full scientific name: Mariniblastus fucicola Lage et al. 2017

genus: Mariniblastus

keyword: phylum/planctomycetota

order: Pirellulales

phylum: Planctomycetota

species: Mariniblastus fucicola

phylum: Planctomycetes

description: Mariniblastus fucicola strain FC18 16S ribosomal RNA gene, partial sequence

description: ASM808766v1 assembly for Mariniblastus fucicola FC18

description: ASM164287v1 assembly for Mariniblastus fucicola FC18


class: Dehalococcoidia

description: domain/bacteria

family: Dehalococcoidaceae

full scientific name: Dehalogenimonas formicexedens Key et al. 2017

genus: Dehalogenimonas

keyword: phylum/chloroflexota

order: Dehalococcoidales

phylum: Chloroflexota

species: Dehalogenimonas formicexedens

phylum: Chloroflexi

description: Dehalogenimonas formicexedens strain NSZ-14 16S ribosomal RNA gene, partial sequence

description: ASM195317v1 assembly for Dehalogenimonas formicexedens NSZ-14


description: domain/bacteria

family: Lysobacteraceae

full scientific name: Lysobacter solanacearum Kim et al. 2017

genus: Lysobacter

order: Lysobacterales

species: Lysobacter solanacearum

phylum: Proteobacteria

description: Lysobacter solanacearum strain T20R-70 16S ribosomal RNA gene, complete sequence


description: domain/bacteria

family: Thioalkalispiraceae

full scientific name: Endothiovibrio diazotrophicus Bazylinski et al. 2017

genus: Endothiovibrio

order: Chromatiales

species: Endothiovibrio diazotrophicus

description: Endothiovibrio diazotrophicus strain S-1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Bartonellaceae

full scientific name: Manganibacter manganicus (Li et al. 2017) Li et al. 2025

genus: Manganibacter

order: Hyphomicrobiales

species: Manganibacter manganicus

synonym: Pseudaminobacter manganicus

family: Phyllobacteriaceae

genus: Pseudaminobacter

species: Pseudaminobacter manganicus

description: Pseudaminobacter manganicus strain JH-7 16S ribosomal RNA gene, partial sequence

description: ASM207588v1 assembly for Manganibacter manganicus JH-7


description: domain/bacteria

family: Morganellaceae

full scientific name: Xenorhabdus thuongxuanensis Kämpfer et al. 2017

genus: Xenorhabdus

order: Enterobacterales

species: Xenorhabdus thuongxuanensis

description: Xenorhabdus thuongxuanensis strain 30TX1 16S ribosomal RNA gene, complete sequence

description: ASM190809v1 assembly for Xenorhabdus thuongxuanensis 30TX1


description: domain/bacteria

full scientific name: Xenorhabdus eapokensis Kämpfer et al. 2017

species: Xenorhabdus eapokensis

description: Xenorhabdus eapokensis strain DL20 16S ribosomal RNA gene, complete sequence

description: ASM190810v1 assembly for Xenorhabdus eapokensis DL20


description: domain/bacteria

family: Maricaulaceae

full scientific name: Hyphobacterium vulgare Sun et al. 2017

genus: Hyphobacterium

order: Caulobacterales

species: Hyphobacterium vulgare

family: Hyphomonadaceae

description: Hyphobacterium vulgare strain WM6 16S ribosomal RNA gene, partial sequence

description: ASM4264333v1 assembly for Hyphobacterium vulgare KCTC 52487


description: domain/bacteria

family: Rhodanobacteraceae

full scientific name: Rhodanobacter humi Dahal and Kim 2017

genus: Rhodanobacter

species: Rhodanobacter humi

description: Rhodanobacter humi strain RS22 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Mangrovibacter phragmitis Behera et al. 2017

genus: Mangrovibacter

species: Mangrovibacter phragmitis

description: Mangrovibacter phragmitis strain MP23 16S ribosomal RNA gene, partial sequence

description: ASM165567v1 assembly for Mangrovibacter phragmitis MP23


description: domain/bacteria

family: Roseobacteraceae

full scientific name: Nioella sediminis Liu et al. 2017

genus: Nioella

order: Rhodobacterales

species: Nioella sediminis

family: Rhodobacteraceae

description: Nioella sediminis strain JS7-11 16S ribosomal RNA gene, partial sequence

description: ASM187969v1 assembly for Nioella sediminis JS7-11


description: domain/bacteria

family: Psychromonadaceae

full scientific name: Psychromonas aquatilis Kämpfer et al. 2017

genus: Psychromonas

order: Alteromonadales

species: Psychromonas aquatilis

description: Psychromonas aquatilis strain M1A1 16S ribosomal RNA gene, partial sequence


class: Betaproteobacteria

description: domain/bacteria

family: Aquaspirillaceae

full scientific name: Aquaspirillum soli Moya et al. 2017

genus: Aquaspirillum

order: Neisseriales

species: Aquaspirillum soli

family: Chromobacteriaceae

description: Aquaspirillum soli strain THG-SQE6 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Paenibacillus apis Yun et al. 2017

phylum: Bacillota

species: Paenibacillus apis

phylum: Firmicutes

description: Paenibacillus apis strain CBM1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Paenibacillus intestini Yun et al. 2017

species: Paenibacillus intestini

description: Paenibacillus intestini strain LAH16 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus crotali McLaughlin et al. 2017

genus: Enterococcus

order: Lactobacillales

species: Enterococcus crotali

description: Enterococcus crotali strain ETRF1 16S ribosomal RNA gene, partial sequence

description: NGEN (DNA Star) assembly for Enterococcus crotali ETRF1


description: domain/bacteria

family: Sphingomonadaceae

full scientific name: Sphingopyxis solisilvae Chaudhary et al. 2017

genus: Sphingopyxis

order: Sphingomonadales

species: Sphingopyxis solisilvae

description: Sphingopyxis solisilvae strain R366 16S ribosomal RNA gene, partial sequence

description: ASM1547587v1 assembly for Sphingopyxis solisilvae R366