description: domain/bacteria

family: Micrococcaceae

full scientific name: Micrococcus luteus (Schroeter 1872) Cohn 1872 (Approved Lists 1980)

genus: Micrococcus

order: Micrococcales

species: Micrococcus luteus

synonym: Micrococcus yunnanensis

synonym: Bacteridium luteum

synonym: Micrococcus aloeverae

full scientific name: Micrococcus luteus (Schroeter 1872) Cohn 1872 emend. Nouioui et al. 2018


Matching level: species

class: Actinomycetes

description: domain/bacteria

domain: Bacteria

family: Dermacoccaceae

full scientific name: Dermacoccus nishinomiyaensis (Oda 1935) Stackebrandt et al. 1995

genus: Dermacoccus

keyword: phylum/actinomycetota

phylum: Actinomycetota

species: Dermacoccus nishinomiyaensis

synonym: Micrococcus nishinomiyaensis

class: Actinobacteria

order: Actinomycetales

phylum: Actinobacteria

type strain: no


description: domain/bacteria

full scientific name: Micrococcus sp.

species: Micrococcus sp.

assembly level: contig

description: ASM1487416v1 assembly for Micrococcus yunnanensis DSM 24531


description: domain/bacteria

full scientific name: <I>Micrococcus</I> Cohn 1872 (Approved Lists 1980)

strain designation: Stevenage 150518_C6


description: domain/bacteria

family: Micromonosporaceae

full scientific name: <I>Micromonospora</I> Ørskov 1923 (Approved Lists 1980)

genus: Micromonospora

order: Micromonosporales

species: Micromonospora sp.

synonym: Jishengella

synonym: Xiangella

synonym: Verrucosispora

full scientific name: Micromonospora sp.

description: ASM317671v1 assembly for Micromonospora sp. S4605


description: domain/bacteria

database: nuccore

description: Micromonospora sp. S2510 16S ribosomal RNA gene, partial sequence


class: Deltaproteobacteria

description: domain/bacteria

family: Nannocystaceae

full scientific name: Nannocystis exedens Reichenbach 1970 (Approved Lists 1980)

genus: Nannocystis

keyword: phylum/pseudomonadota

order: Myxococcales

phylum: Pseudomonadota

species: Nannocystis exedens

full scientific name: Nannocystis exedens Reichenbach 1970

phylum: Proteobacteria

strain designation: Na e146


description: domain/bacteria

family: Nocardiaceae

full scientific name: <I>Nocardia</I> Trevisan 1889 (Approved Lists 1980)

genus: Nocardia

order: Mycobacteriales

species: Nocardia sp.

synonym: Micropolyspora

full scientific name: Nocardia sp.


description: domain/bacteria

description: Nocardia sp. YIM 48789 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Nocardia sp. CPCC202701 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Nocardia sp. CPCC202725 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Nocardia sp. CPCC202726 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Propionibacteriaceae

genus: Cutibacterium

order: Propionibacteriales

species: Cutibacterium acnes

synonym: Propionibacterium acnes

synonym: Bacillus acnes

full scientific name: Cutibacterium acnes (Gilchrist 1900) Scholz and Kilian 2016 emend. Nouioui et al. 2018


description: domain/bacteria

species: Cutibacterium avidum

synonym: Bacteroides avidus

synonym: Propionibacterium avidum

full scientific name: Cutibacterium avidum (Eggerth 1935) Scholz and Kilian 2016 emend. Nouioui et al. 2018

strain designation: Stevenage 150518_C11


description: domain/bacteria

full scientific name: Cutibacterium avidum (Eggerth 1935) Scholz and Kilian 2016

description: ASM169296v1 assembly for Cutibacterium avidum UCD-PD2


class: Gammaproteobacteria

description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)

genus: Pseudomonas

order: Pseudomonadales

species: Pseudomonas aeruginosa

synonym: Pseudomonas paraeruginosa

synonym: Bacterium aeruginosum

order: Burkholderiales

strain designation: MH 29

assembly level: complete

description: 1257 assembly for Pseudomonas aeruginosa DSM 22043


description: domain/bacteria

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900


description: domain/bacteria

full scientific name: Pseudomonas fluorescens Migula 1895 (Approved Lists 1980)

species: Pseudomonas fluorescens

full scientific name: Pseudomonas fluorescens Migula 1895

assembly level: chromosome

description: ASM162352v1 assembly for Pseudomonas fluorescens FW300-N2E2


description: domain/bacteria

description: ASM162545v1 assembly for Pseudomonas fluorescens FW300-N1B4


description: domain/bacteria

description: ASM130727v1 assembly for Pseudomonas fluorescens FW300-N2C3


description: domain/bacteria

assembly level: scaffold

description: ASM144032v1 assembly for Pseudomonas fluorescens GW456-L13


description: domain/bacteria

description: ASM130715v1 assembly for Pseudomonas fluorescens FW300-N2E3

description: Pseudomonas fluorescens FW300-N2E3


description: domain/bacteria

full scientific name: Pseudomonas fragi (Eichholz 1902) Gruber 1905 (Approved Lists 1980)

species: Pseudomonas fragi

synonym: Bacterium fragi


description: domain/bacteria

full scientific name: <I>Pseudomonas</I> Migula 1894 (Approved Lists 1980)

species: Pseudomonas sp.

synonym: Metapseudomonas

synonym: Zestomonas

synonym: Caenipseudomonas

synonym: Phytopseudomonas

synonym: Ectopseudomonas

synonym: Aquipseudomonas

synonym: Geopseudomonas

synonym: Flavimonas

synonym: Chryseomonas

full scientific name: Pseudomonas sp.

strain designation: AZ10, AZ10 UPM

description: Pseudomonas sp. BND-B4 16S ribosomal RNA gene, partial sequence


description: domain/bacteria


description: domain/bacteria

description: Pseudomonas sp. MR7 partial 16S rRNA gene, strain MR7


description: domain/bacteria

full scientific name: Pseudomonas asiatica Tohya et al. 2019

species: Pseudomonas asiatica

synonym: Pseudomonas shirazica

strain designation: RYU-5, RYU5

type strain: yes

description: Pseudomonas sp. strain RYU5 16S ribosomal RNA gene, partial sequence

description: ASM993233v1 assembly for Pseudomonas asiatica RYU5


description: domain/bacteria

strain designation: Stevenage 150518_C8


description: domain/bacteria

strain designation: Stevenage 150518_C10


description: domain/bacteria

strain designation: Stevenage 150518_C14


description: domain/bacteria

full scientific name: Rhodococcus hoagii (Morse 1912) Kämpfer et al. 2014

genus: Rhodococcus

species: Rhodococcus hoagii

synonym: Corynebacterium hoagii

synonym: Bacillus hoagii

family: Corynebacteriaceae

full scientific name: Corynebacterium hoagii (Morse 1912) Eberson 1918

genus: Corynebacterium

species: Corynebacterium hoagii

description: ASM19669v1 assembly for Prescottella equi 103S


description: domain/bacteria

full scientific name: Rhodococcus erythropolis (Gray and Thornton 1928) Goodfellow and Alderson 1979 (Approved Lists 1980)

species: Rhodococcus erythropolis

synonym: Rhodococcus jialingiae

synonym: Rhodococcus degradans

synonym: Rhodococcus qingshengii

synonym: Nocardia erythropolis

synonym: Rhodococcus enclensis

synonym: Mycobacterium erythropolis

synonym: Rhodococcus baikonurensis

synonym: Nocardia calcarea

synonym: Arthrobacter picolinophilus

full scientific name: Rhodococcus erythropolis (Gray and Thornton 1928) Goodfellow and Alderson 1979 emend. Nouioui et al. 2018

description: Rhodococcus sp. BG43 16S ribosomal RNA gene, partial sequence

description: ASM97517v1 assembly for Rhodococcus erythropolis BG43


description: domain/bacteria

strain designation: Stevenage 150518_C15


description: domain/bacteria

full scientific name: <I>Rhodococcus</I> Zopf 1891 (Approved Lists 1980)

species: Rhodococcus sp.

synonym: Prescottella

synonym: Rhodococcoides

synonym: Prescottia

full scientific name: Rhodococcus sp.


description: domain/bacteria

description: Rhodococcus sp. SCSIO 00026 16S ribosomal RNA gene, partial sequence.


Matching level: subspecies

description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Salmonella enterica subsp. enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987

genus: Salmonella

order: Enterobacterales

species: Salmonella enterica subsp. enterica

synonym: Salmonella choleraesuis subsp. choleraesuis

order: Enterobacteriales, not validated

strain designation: strain 6

description: ASM311793v1 assembly for Salmonella enterica subsp. enterica serovar Newport 6

description: ASM300593v1 assembly for Salmonella enterica subsp. enterica serovar Typhi 6

description: ASM1487814v1 assembly for Salmonella enterica subsp. enterica serovar Typhimurium 6


description: domain/bacteria

strain designation: strain 45

description: ASM312117v1 assembly for Salmonella enterica subsp. enterica serovar Cerro 45

description: ASM1486167v1 assembly for Salmonella enterica subsp. enterica serovar Derby 45


description: domain/bacteria

strain designation: strain 104

description: ASM311999v1 assembly for Salmonella enterica subsp. enterica serovar Braenderup 104

description: ASM1423025v1 assembly for Salmonella enterica subsp. enterica serovar Enteritidis 104


description: domain/bacteria

strain designation: strain 117

description: ASM311975v1 assembly for Salmonella enterica subsp. enterica serovar Mbandaka 117

description: ASM1486166v1 assembly for Salmonella enterica subsp. enterica serovar Typhimurium 117


description: domain/bacteria

strain designation: strain 191

description: ASM1486171v1 assembly for Salmonella enterica subsp. enterica serovar Enteritidis 191

description: ASM311723v1 assembly for Salmonella enterica subsp. enterica serovar Javiana 191


description: domain/bacteria

strain designation: strain 232

description: ASM1486164v1 assembly for Salmonella enterica subsp. enterica serovar Enteritidis 232

description: ASM307737v1 assembly for Salmonella enterica subsp. enterica serovar Freetown 232


description: domain/bacteria

strain designation: strain 240

description: ASM307723v1 assembly for Salmonella enterica subsp. enterica serovar Anatum 240

description: ASM1486168v1 assembly for Salmonella enterica subsp. enterica serovar Enteritidis 240


description: domain/bacteria

strain designation: strain 241

description: ASM1486186v1 assembly for Salmonella enterica subsp. enterica serovar Reading 241


description: domain/bacteria

strain designation: strain 256

description: ASM1486178v1 assembly for Salmonella enterica subsp. enterica serovar Reading 256


description: domain/bacteria

strain designation: strain 261

description: ASM1486177v1 assembly for Salmonella enterica subsp. enterica serovar Enteritidis 261


description: domain/bacteria

strain designation: strain 310

description: ASM1486176v1 assembly for Salmonella enterica subsp. enterica serovar Kottbus 310


description: domain/bacteria

strain designation: strain 311

description: ASM1423022v1 assembly for Salmonella enterica subsp. enterica serovar Typhimurium 311


description: domain/bacteria

strain designation: strain 375

description: ASM1486182v1 assembly for Salmonella enterica subsp. enterica serovar Dublin 375


description: domain/bacteria

strain designation: strain 386

description: ASM1486174v1 assembly for Salmonella enterica subsp. enterica serovar Typhimurium 386


description: domain/bacteria

strain designation: strain 399

description: ASM1486161v1 assembly for Salmonella enterica subsp. enterica serovar Enteritidis 399


description: domain/bacteria

strain designation: strain 407

description: ASM1486156v1 assembly for Salmonella enterica subsp. enterica serovar Enteritidis 407


description: domain/bacteria

strain designation: strain 422

description: ASM1486184v1 assembly for Salmonella enterica subsp. enterica serovar Typhimurium 422


description: domain/bacteria

strain designation: strain 641

description: ASM1486160v1 assembly for Salmonella enterica subsp. enterica serovar Typhimurium 641


description: domain/bacteria

strain designation: strain 765

description: ASM1486155v1 assembly for Salmonella enterica subsp. enterica serovar Enteritidis 765


description: domain/bacteria

strain designation: strain 1150

description: ASM1423026v1 assembly for Salmonella enterica subsp. enterica serovar Typhimurium 1150


description: domain/bacteria

strain designation: strain 164

description: ASM311877v1 assembly for Salmonella enterica subsp. enterica serovar Montevideo 164


description: domain/bacteria

strain designation: strain 259


class: Bacilli

description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus capitis Kloos and Schleifer 1975 (Approved Lists 1980)

genus: Staphylococcus

keyword: phylum/bacillota

order: Caryophanales

phylum: Bacillota

species: Staphylococcus capitis

order: Bacillales

phylum: Firmicutes

description: ASM165047v1 assembly for Staphylococcus capitis H36


description: domain/bacteria

full scientific name: Staphylococcus capitis Kloos and Schleifer 1975


description: domain/bacteria

strain designation: Stevenage 150518_C7


description: domain/bacteria

full scientific name: Staphylococcus epidermidis (Winslow and Winslow 1908) Evans 1916 (Approved Lists 1980)

species: Staphylococcus epidermidis

synonym: Albococcus epidermidis


description: domain/bacteria

full scientific name: Staphylococcus epidermidis (Winslow and Winslow 1908) Evans 1916


description: domain/bacteria

full scientific name: Staphylococcus haemolyticus Schleifer and Kloos 1975 (Approved Lists 1980)

species: Staphylococcus haemolyticus


description: domain/bacteria

full scientific name: Staphylococcus lugdunensis Freney et al. 1988

species: Staphylococcus lugdunensis


description: domain/bacteria

strain designation: Stevenage 150518_C21


description: domain/bacteria

full scientific name: <I>Staphylococcus</I> Rosenbach 1884 (Approved Lists 1980)

species: Staphylococcus sp.

synonym: Mammaliicoccus

full scientific name: Staphylococcus sp.


description: domain/bacteria

full scientific name: Staphylococcus warneri Kloos and Schleifer 1975 (Approved Lists 1980)

species: Staphylococcus warneri


description: domain/bacteria

full scientific name: Staphylococcus warneri Kloos and Schleifer 1975


description: domain/bacteria

family: Streptomycetaceae

full scientific name: <I>Streptomyces</I> Waksman and Henrici 1943 (Approved Lists 1980)

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces sp.

synonym: Chainia

synonym: Actinacidiphila

synonym: Kitasatoa

synonym: Actinopycnidium

synonym: Elytrosporangium

synonym: Microellobosporia

synonym: Actinosporangium

synonym: Streptoverticillium

synonym: Microechinospora

synonym: Carbonactinospora

full scientific name: Streptomyces sp.


description: domain/bacteria

full scientific name: Streptomyces coryli Saygin et al. 2020

species: Streptomyces coryli


description: domain/bacteria

full scientific name: Streptomyces roseifaciens van der Aart et al. 2019

species: Streptomyces roseifaciens

description: ASM144565v1 assembly for Streptomyces roseifaciens MBT76


description: domain/bacteria

family: Vibrionaceae

full scientific name: Vibrio alginolyticus (Miyamoto et al. 1961) Sakazaki 1968 (Approved Lists 1980)

genus: Vibrio

order: Vibrionales

species: Vibrio alginolyticus

synonym: Beneckea alginolytica

synonym: Oceanomonas alginolytica

order: Vibrionales, not validated


description: domain/bacteria

full scientific name: Vibrio eleionomae Enciso-Ibarra et al. 2023

species: Vibrio eleionomae

full scientific name: Vibrio sp.

species: Vibrio sp.

description: Vibrio sp. CAIM 722 16S ribosomal RNA gene, partial sequence.

description: ASM987454v1 assembly for Vibrio eleionomae CAIM 722


description: domain/bacteria

full scientific name: Vibrio zhanjiangensis Jin et al. 2012

species: Vibrio zhanjiangensis

description: Vibrio zhanjiangensis strain E414 16S ribosomal RNA gene, partial sequence

description: ASM3016123v1 assembly for Vibrio zhanjiangensis NBRC 108723


description: domain/bacteria

full scientific name: <I>Vibrio</I> Pacini 1854 (Approved Lists 1980)

synonym: Allomonas

synonym: Beneckea

synonym: Lucibacterium


description: domain/bacteria

description: Vibrio sp. R5 partial 16S rRNA gene, isolate R5


description: domain/bacteria

family: Lysobacteraceae

full scientific name: Stenotrophomonas maltophilia (Hugh 1981 ex Hugh and Ryschenkow 1961) Palleroni and Bradbury 1993

genus: Stenotrophomonas

order: Lysobacterales

species: Stenotrophomonas maltophilia

synonym: Stenotrophomonas africana

synonym: Xanthomonas maltophilia

synonym: Pseudomonas maltophilia

full scientific name: Stenotrophomonas maltophilia (Hugh 1981) Palleroni and Bradbury 1993


description: domain/bacteria

family: Nocardiopsidaceae

full scientific name: Marinitenerispora sediminis Ng et al. 2019

genus: Marinitenerispora

order: Streptosporangiales

species: Marinitenerispora sediminis

family: Nocardiopsaceae

description: Marinitenerispora sediminis strain TPS16 16S ribosomal RNA gene, partial sequence

description: ASM333642v1 assembly for Marinitenerispora sediminis TPS16


description: domain/bacteria

full scientific name: Staphylococcus capitis subsp. urealyticus corrig. Bannerman and Kloos 1991

synonym: Staphylococcus capitis subsp. ureolyticus

full scientific name: Staphylococcus capitis subsp. urealyticus Bannerman and Kloos 1991

description: ASM165039v1 assembly for Staphylococcus capitis H65


description: domain/bacteria

family: Moraxellaceae

full scientific name: <I>Acinetobacter</I> Brisou and Prévot 1954 (Approved Lists 1980)

genus: Acinetobacter

species: Acinetobacter sp.

full scientific name: Acinetobacter sp.

description: Acinetobacter sp. MR5 partial 16S rRNA gene, strain MR5


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Paenibacillus glucanolyticus (Alexander and Priest 1989) Shida et al. 1997

genus: Paenibacillus

species: Paenibacillus glucanolyticus

synonym: Bacillus glucanolyticus

strain designation: P073 TypA


description: domain/bacteria


culture collection no.: DSM 105457, BAC RE RSCIC 7

class: Alphaproteobacteria

description: domain/bacteria

family: Sphingomonadaceae

full scientific name: Sphingomonas turrisvirgatae Thaller et al. 2018

genus: Sphingomonas

order: Sphingomonadales

species: Sphingomonas turrisvirgatae

synonym: Alteristakelama turrisvirgatae

description: Sphingomonas turrisvirgatae strain MCT13 16S ribosomal RNA gene, partial sequence

description: ASM172129v1 assembly for Sphingomonas turrisvirgatae MCT13


class: Thermotogae

description: domain/bacteria

family: Thermotogaceae

full scientific name: <I>Thermotoga</I> Stetter and Huber 1986

genus: Thermotoga

keyword: phylum/thermotogota

order: Thermotogales

phylum: Thermotogota

species: Thermotoga sp.

full scientific name: Thermotoga sp.

phylum: Thermotogae

strain designation: 1864 opik

description: Thermotoga sp. 1864opik 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Acetobacteraceae

full scientific name: Teichococcus wenyumeiae (Tian et al. 2019) Liu and Xin 2025

genus: Teichococcus

order: Rhodospirillales

species: Teichococcus wenyumeiae

synonym: Pseudoroseomonas wenyumeiae

synonym: Roseomonas wenyumeiae

full scientific name: Roseomonas wenyumeiae Tian et al., 2019

genus: Roseomonas

order: Rhizobiales

species: Roseomonas wenyumeiae

description: Pseudoroseomonas wenyumeiae strain Z23 16S ribosomal RNA gene, partial sequence

description: ASM369634v1 assembly for Teichococcus wenyumeiae Z23


class: Bacillota, not assigned to class

description: domain/bacteria

family: Bacillota, not assigned to family

full scientific name: Desulfosporomusa polytropa Sass et al. 2004

genus: Desulfosporomusa

order: Bacillota, not assigned to order

species: Desulfosporomusa polytropa

class: Firmicutes, not assigned to class

family: Firmicutes, not assigned to family

order: Firmicutes, not assigned to order

description: Desulfosporomusa polytropa partial 16S rRNA gene, strain STP3


description: domain/bacteria

full scientific name: Acinetobacter baumannii Bouvet and Grimont 1986

order: Pseudomonadales

species: Acinetobacter baumannii

description: 7468_2#95 assembly for Acinetobacter baumannii G7

description: ASM4506451v1 assembly for Acinetobacter baumannii DSM 25645


description: domain/bacteria

description: ASM4506449v1 assembly for Acinetobacter baumannii DSM 101993


description: domain/bacteria

strain designation: Phage host

description: ASM4506443v1 assembly for Acinetobacter baumannii DSM 106838


description: domain/bacteria

family: Erwiniaceae

full scientific name: <I>Pantoea</I> Gavini et al. 1989

genus: Pantoea

species: Pantoea sp.

synonym: Kalamiella

full scientific name: Pantoea sp.


description: domain/bacteria

family: Sphingosinicellaceae

full scientific name: Pacificimonas aurantia corrig. Li et al. 2025

genus: Pacificimonas

species: Pacificimonas aurantia

synonym: Pacificimonas aurantium

full scientific name: Pacificimonas aurantium Li et al. 2016

order: Clostridiales

species: Pacificimonas aurantium

description: Alpha proteobacterium JLT2012 16S ribosomal RNA gene, partial sequence

description: ASM2009290v1 assembly for Pacificimonas aurantium DSM 107782


class: Epsilonproteobacteria

description: domain/bacteria

family: Arcobacteraceae

full scientific name: Arcobacter butzleri (Kiehlbauch et al. 1991) Vandamme et al. 1992

genus: Arcobacter

order: Campylobacterales

species: Arcobacter butzleri

synonym: Aliarcobacter butzleri

synonym: Campylobacter butzleri


description: domain/bacteria

full scientific name: Arcobacter skirrowii Vandamme et al. 1992

species: Arcobacter skirrowii

synonym: Aliarcobacter skirrowii


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Klebsiella pneumoniae (Schroeter 1886) Trevisan 1887 (Approved Lists 1980)

genus: Klebsiella

order: Enterobacterales

species: Klebsiella pneumoniae

synonym: Hyalococcus pneumoniae

order: Enterobacteriales, not validated

description: ASM190243v1 assembly for Klebsiella pneumoniae Kp_Goe_33208


description: domain/bacteria

full scientific name: Klebsiella pneumoniae (Schroeter 1886) Trevisan 1887

description: ASM190239v1 assembly for Klebsiella pneumoniae Kp_Goe_39795


description: domain/bacteria

description: ASM190235v1 assembly for Klebsiella pneumoniae Kp_Goe_62629


description: domain/bacteria

description: ASM190251v1 assembly for Klebsiella pneumoniae Kp_Goe_71070


description: domain/bacteria

description: ASM190889v1 assembly for Klebsiella pneumoniae Kp_Goe_821588


description: domain/bacteria

description: ASM188525v2 assembly for Klebsiella pneumoniae Kp_Goe_822579


description: domain/bacteria

description: ASM190241v1 assembly for Klebsiella pneumoniae Kp_Goe_822917


description: domain/bacteria

description: ASM195696v1 assembly for Klebsiella pneumoniae 825795-1


description: domain/bacteria

description: ASM190862v1 assembly for Klebsiella pneumoniae Kp_Goe_827024


description: domain/bacteria

description: ASM190865v1 assembly for Klebsiella pneumoniae Kp_Goe_827026


description: domain/bacteria

description: ASM190869v1 assembly for Klebsiella pneumoniae KP_Goe_828304


description: domain/bacteria

description: ASM191317v1 assembly for Klebsiella pneumoniae Kp_Goe_121641


description: domain/bacteria

description: ASM190859v1 assembly for Klebsiella pneumoniae Kp_Goe_149473


description: domain/bacteria

description: ASM190887v1 assembly for Klebsiella pneumoniae Kp_Goe_149832


description: domain/bacteria

description: ASM190867v1 assembly for Klebsiella pneumoniae Kp_Goe_152021


description: domain/bacteria

description: ASM190233v1 assembly for Klebsiella pneumoniae


description: domain/bacteria

family: Promicromonosporaceae

full scientific name: Oerskovia turbata (Erikson 1954) Prauser et al. 1970 (Approved Lists 1980)

genus: Oerskovia

order: Micrococcales

species: Oerskovia turbata

synonym: Nocardia turbata

synonym: Cellulomonas turbata

full scientific name: Oerskovia turbata (Erikson 1954) Prauser et al. 1970 emend. Nouioui et al. 2018

order: Actinomycetales


description: domain/bacteria

family: Caulobacteraceae

full scientific name: Brevundimonas vesicularis (Büsing et al. 1953) Segers et al. 1994

genus: Brevundimonas

order: Caulobacterales

species: Brevundimonas vesicularis

synonym: Corynebacterium vesiculare

synonym: Pseudomonas vesicularis


description: domain/bacteria

family: Polyangiaceae

full scientific name: <I>Sorangium</I> (ex Jahn 1924) Reichenbach 2007

genus: Sorangium

order: Polyangiales

species: Sorangium sp.

full scientific name: Sorangium sp.

order: Myxococcales

strain designation: So D 10


description: domain/bacteria

full scientific name: <I>Enterobacter</I> Hormaeche and Edwards 1960 (Approved Lists 1980)

genus: Enterobacter

species: Enterobacter sp.

synonym: Cloaca

full scientific name: Enterobacter sp.

strain designation: Stevenage 150518_C13


class: Planctomycetia

description: domain/bacteria

family: Planctomycetaceae

full scientific name: <I>Schlesneria</I> Kulichevskaya et al. 2007

genus: Schlesneria

keyword: phylum/planctomycetota

order: Planctomycetales

phylum: Planctomycetota

species: Schlesneria sp.

full scientific name: Schlesneria sp.

phylum: Planctomycetes


description: domain/bacteria

full scientific name: <I>Caulobacter</I> Henrici and Johnson 1935 (Approved Lists 1980)

genus: Caulobacter

species: Caulobacter sp.

full scientific name: Caulobacter sp.


class: Nitrososphaeria

description: domain/archaea

domain: Archaea

family: Nitrosopumilaceae

full scientific name: Nitrosopumilus adriaticus Bayer et al. 2019

genus: Nitrosopumilus

keyword: phylum/thermoproteota

order: Nitrosopumilales

phylum: Thermoproteota

species: Nitrosopumilus adriaticus

synonym: Nitrosopumilus adriaticus

phylum: Thaumarchaeota

description: Nitrosopumilus adriaticus strain NF5 16S ribosomal RNA gene, partial sequence

description: ASM95617v1 assembly for Nitrosopumilus adriaticus NF5


class: Clostridia

description: domain/bacteria

family: Peptococcaceae

full scientific name: Desulfofundulus salinus Nazina et al. 2025

genus: Desulfofundulus

order: Eubacteriales

species: Desulfofundulus salinus

synonym: Desulfotomaculum nigrificans subsp. salinus

synonym: Desulfotomaculum salinum

synonym: Desulfofundulus salinum

full scientific name: Desulfofundulus salinus Nazina et al. 2024

description: Desulfotomaculum salinum strain 781 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Piscirickettsiaceae

full scientific name: Methylophaga thalassica Janvier et al. 1985

genus: Methylophaga

order: Beggiatoales

species: Methylophaga thalassica

order: Thiotrichales


description: domain/bacteria

family: Microbacteriaceae

full scientific name: <I>Microbacterium</I> Orla-Jensen 1919 (Approved Lists 1980)

genus: Microbacterium

species: Microbacterium sp.

synonym: Aureobacterium

synonym: Paramicrobacterium

full scientific name: Microbacterium sp.

description: ASM165040v1 assembly for Microbacterium sp. H83


description: domain/bacteria


description: domain/bacteria

strain designation: Stevenage 150518_C1


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980)

genus: Staphylococcus

order: Caryophanales

species: Staphylococcus aureus

synonym: Staphylococcus aureus subsp. anaerobius

synonym: Staphylococcus roterodami

full scientific name: Staphylococcus aureus Rosenbach 1884

order: Bacillales

description: 1256 assembly for Staphylococcus aureus DSM 104437


description: domain/bacteria


description: domain/bacteria

full scientific name: Staphylococcus cohnii Schleifer and Kloos 1975 (Approved Lists 1980)

species: Staphylococcus cohnii

description: ASM165064v1 assembly for Staphylococcus cohnii H62


description: domain/bacteria

family: Actinomycetaceae

full scientific name: <I>Actinomyces</I> Harz 1877 (Approved Lists 1980)

genus: Actinomyces

species: Actinomyces sp.

synonym: Actinobacterium

synonym: Odontomyces

full scientific name: Actinomyces sp.

description: Actinomyces sp. AM4 partial 16S rRNA gene, strain Am4


description: domain/bacteria

description: Actinomyces ruminicola strain G10 16S ribosomal RNA gene, partial sequence

description: Acetnomyces glycerinotoleransG10 assembly for Actinomyces glycerinitolerans


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: <I>Amycolatopsis</I> Lechevalier et al. 1986

genus: Amycolatopsis

order: Pseudonocardiales

species: Amycolatopsis sp.

synonym: Yuhushiella

full scientific name: Amycolatopsis sp.


description: domain/bacteria

description: Amycolatopsis sp. YIM 92375 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

description: Amycolatopsis sp. C33 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Amycolatopsis sp. C65 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Amycolatopsis sp. C69 16S ribosomal RNA gene, partial sequence


class: Betaproteobacteria

description: domain/bacteria

family: Burkholderiaceae

full scientific name: <I>Burkholderia</I> Yabuuchi et al. 1993

genus: Burkholderia

order: Burkholderiales

species: Burkholderia sp.

full scientific name: Burkholderia sp.

description: Burkholderia sp. MAK1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria


description: domain/bacteria

family: Oscillospiraceae

full scientific name: Acetivibrio mesophilus (Rettenmaier et al. 2019) Tindall 2019

genus: Acetivibrio

species: Acetivibrio mesophilus

synonym: Hungateiclostridium mesophilum

order: Clostridiales

description: Acetivibrio mesophilus strain N2K1 16S ribosomal RNA gene, partial sequence

description: ASM410274v1 assembly for Acetivibrio mesophilus N2K1


description: domain/bacteria

family: Kaistiaceae

full scientific name: <I>Prosthecomicrobium</I> Staley 1968 (Approved Lists 1980)

genus: Prosthecomicrobium

order: Hyphomicrobiales

species: Prosthecomicrobium sp.

family: Hyphomicrobiaceae

full scientific name: Prosthecomicrobium sp.

order: Rhizobiales

description: Prosthecomicrobium hirschii strain 6 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Ancalomicrobiaceae

full scientific name: Prosthecodimorpha hirschii (Staley 1984) Vasilyeva et al. 2025

genus: Prosthecodimorpha

species: Prosthecodimorpha hirschii

synonym: Prosthecodimorpha hirschii

synonym: Prosthecomicrobium hirschii

full scientific name: Prosthecomicrobium hirschii Staley 1984

species: Prosthecomicrobium hirschii

description: Prosthecomicrobium hirschii ATCC:27832 16S ribosomal RNA gene, partial sequence

description: ASM130551v1 assembly for Prosthecodimorpha hirschii 16

description: Prosthecomicrobium hirschii ATCC 27832


class: Verrucomicrobiia

description: domain/bacteria

family: Verrucomicrobiaceae

full scientific name: Prosthecobacter fusiformis (ex Staley et al. 1976) Staley et al. 1980

genus: Prosthecobacter

keyword: phylum/verrucomicrobiota

order: Verrucomicrobiales

phylum: Verrucomicrobiota

species: Prosthecobacter fusiformis

class: Verrucomicrobiae

phylum: Verrucomicrobia

description: Prosthecobacter fusiformis 16S ribosomal RNA gene, partial sequence

description: ASM436434v1 assembly for Prosthecobacter fusiformis ATCC 25309


culture collection no.: DSM 45232, IMMIB L-24

description: domain/bacteria

full scientific name: Saccharopolyspora hordei Goodfellow et al. 1989

genus: Saccharopolyspora

species: Saccharopolyspora hordei

order: Actinomycetales


description: domain/bacteria

family: Streptosporangiaceae

full scientific name: Microbispora tritici Han et al. 2019

genus: Microbispora

order: Streptosporangiales

species: Microbispora tritici

description: Microbispora sp. strain NEAU-HRGS1-13 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Agrococcus jenensis Groth et al. 1996

genus: Agrococcus

order: Micrococcales

species: Agrococcus jenensis

strain designation: Stevenage 150518_ C3


description: domain/bacteria

family: Bacillaceae

full scientific name: Bacillus pseudalcaliphilus corrig. Nielsen et al. 1995

genus: Bacillus

species: Bacillus pseudalcaliphilus

synonym: Bacillus pseudalcalophilus

synonym: Alkalihalobacillus pseudalcaliphilus

full scientific name: Alkalihalobacillus pseudalcaliphilus (Nielsen et al. 1995) Patel and Gupta 2020

genus: Alkalihalobacillus

species: Alkalihalobacillus pseudalcaliphilus


description: domain/bacteria

family: Kribbellaceae

full scientific name: Kribbella jiaozuonensis Zhao et al. 2019

genus: Kribbella

order: Propionibacteriales

species: Kribbella jiaozuonensis

full scientific name: Kribbella jiaozuonensis Zhao et al., 2019

strain designation: NEAU-THZ 27, NEAU-THZ27

description: Kribbella jiaozuonensis strain NEAU-THZ27 16S ribosomal RNA gene, partial sequence

description: ASM523387v1 assembly for Kribbella jiaozuonensis NEAU-THZ27

description: ASM4265820v1 assembly for Kribbella jiaozuonensis CGMCC 4.7504


description: domain/bacteria

family: Nocardiaceae

full scientific name: Nocardia yunnanensis Zhang et al. 2019

genus: Nocardia

order: Mycobacteriales

species: Nocardia yunnanensis

full scientific name: Nocardia yunnanensis Zhang et al., 2019

description: Nocardia yunnanensis strain CFH S0054 16S ribosomal RNA gene, partial sequence

description: ASM362689v1 assembly for Nocardia yunnanensis CFH S0054


description: domain/bacteria

family: Micrococcaceae

full scientific name: Arthrobacter woluwensis Funke et al. 1997

genus: Arthrobacter

species: Arthrobacter woluwensis

description: ASM302447v1 assembly for Arthrobacter woluwensis NM-35


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Blautia hydrogenotrophica (Bernalier et al. 1997) Liu et al. 2008

genus: Blautia

species: Blautia hydrogenotrophica

synonym: Ruminococcus hydrogenotrophicus

order: Clostridia, not assigned to order

description: ASM5190393v1 assembly for Blautia hydrogenotrophica DSM 108220


description: domain/bacteria

family: Legionellaceae

full scientific name: Legionella longbeachae McKinney et al. 1982

genus: Legionella

order: Legionellales

species: Legionella longbeachae


description: domain/bacteria

full scientific name: <I>Ralstonia</I> Yabuuchi et al. 1996

genus: Ralstonia

species: Ralstonia sp.

full scientific name: Ralstonia sp.

strain designation: PBA

description: Ralstonia sp. PBA 16S ribosomal RNA gene, partial sequence

description: PBA_v2 assembly for Imbroritus primus PBA


description: domain/bacteria

family: Intrasporangiaceae

full scientific name: <I>Terrabacter</I> Collins et al. 1989

genus: Terrabacter

species: Terrabacter sp.

full scientific name: Terrabacter sp.


description: domain/bacteria

family: Comamonadaceae

full scientific name: <I>Acidovorax</I> Willems et al. 1990

genus: Acidovorax

species: Acidovorax sp.

synonym: Paenacidovorax

synonym: Paracidovorax

full scientific name: Acidovorax sp.


description: domain/bacteria

full scientific name: <I>Variovorax</I> Willems et al. 1991

genus: Variovorax

species: Variovorax sp.

full scientific name: Variovorax sp.


description: domain/bacteria

family: Paenibacillaceae

full scientific name: <I>Paenibacillus</I> Ash et al. 1994

genus: Paenibacillus

species: Paenibacillus sp.

synonym: Aerobacillus

full scientific name: Paenibacillus sp.

description: Paenibacillus kribbensis strain KRS4C-6 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Paenibacillus sp. MB 2039 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Paenibacillus sp. LMG 20245 partial 16S rRNA gene, strain LMG 20245


description: domain/bacteria

description: Paenibacillus sp. LnR-29 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Paenibacillus sp. BX7-16 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Paenibacillus sp. BF38 partial 16S rRNA gene, strain BF38


description: domain/bacteria


description: domain/bacteria

family: Bartonellaceae

full scientific name: Mesorhizobium ciceri (Nour et al. 1994) Jarvis et al. 1997

genus: Mesorhizobium

species: Mesorhizobium ciceri

synonym: Rhizobium ciceri

family: Phyllobacteriaceae

description: Mesorhizobium ciceri gene for 16S rRNA, partial sequence, strain: NBRC 100389

description: Mesorhizobium ciceri strain LMG 14989 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA, partial sequence

description: Mesorhizobium ciceri strain LMG 14989 16S ribosomal RNA gene, partial sequence.

description: ASM2926940v1 assembly for Mesorhizobium ciceri LMG 14989


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: Saccharopolyspora gregorii Goodfellow et al. 1989

species: Saccharopolyspora gregorii

strain designation: GoodfellowA85, LaceyA333

description: Saccharopolyspora gregorii strain NCIB 12823 16S ribosomal RNA, partial sequence

description: S.gregorii (NCIB 12823) 16S ribosomal RNA (partial)

description: Saccharopolyspora gregorii strain NCIMB 12823(T) 16S ribosomal RNA gene, partial sequence.

description: ASM3953618v1 assembly for Saccharopolyspora gregorii JCM 9687


description: domain/bacteria

family: Alteromonadaceae

full scientific name: <I>Marinobacter</I> Gauthier et al. 1992

genus: Marinobacter

order: Alteromonadales

species: Marinobacter sp.

full scientific name: Marinobacter sp.

description: Marinobacter sp. JSM 077031 16S ribosomal RNA gene, partial sequence.


class: Sphingobacteriia

description: domain/bacteria

family: Sphingobacteriaceae

full scientific name: <I>Pedobacter</I> Steyn et al. 1998

genus: Pedobacter

keyword: phylum/bacteroidota

order: Sphingobacteriales

phylum: Bacteroidota

species: Pedobacter sp.

synonym: Nubsella

synonym: Paradesertivirga

full scientific name: Pedobacter sp.

phylum: Bacteroidetes


class: Actinomycetes

description: domain/bacteria

full scientific name: <I>Pseudonocardia</I> Henssen 1957 (Approved Lists 1980)

genus: Pseudonocardia

species: Pseudonocardia sp.

synonym: Amycolata

synonym: Pseudoamycolata

synonym: Actinobispora

full scientific name: Pseudonocardia sp.

description: Pseudonocardia sp. YIM 61043 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

class: Actinobacteria

description: Pseudonocardia sp. CPCC202696 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Pseudonocardia tritici Song et al. 2024

species: Pseudonocardia tritici

full scientific name: Pseudonocardia tritici Maggi et al. 2013

description: Pseudonocardia tritici 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus hominis Kloos and Schleifer 1975 (Approved Lists 1980)

genus: Staphylococcus

order: Caryophanales

species: Staphylococcus hominis

full scientific name: Staphylococcus hominis Kloos and Schleifer 1975 emend. Kloos et al. 1998

description: ASM165065v1 assembly for Staphylococcus hominis H69


description: domain/bacteria

family: Roseobacteraceae

full scientific name: Phaeobacter gallaeciensis (Ruiz-Ponte et al. 1998) Martens et al. 2006

genus: Phaeobacter

order: Rhodobacterales

species: Phaeobacter gallaeciensis

synonym: Roseobacter gallaeciensis

family: Rhodobacteraceae

description: ASM238130v1 assembly for Phaeobacter gallaeciensis P11


description: domain/bacteria


description: domain/bacteria

family: Oxalobacteraceae

full scientific name: <I>Herbaspirillum</I> Baldani et al. 1986

genus: Herbaspirillum

species: Herbaspirillum sp.

full scientific name: Herbaspirillum sp.

description: Herbaspirillum sp. GT-L15 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Paracoccaceae

full scientific name: <I>Paracoccus</I> Davis 1969 (Approved Lists 1980)

genus: Paracoccus

species: Paracoccus sp.

synonym: Thiosphaera

full scientific name: Paracoccus sp.

description: Paracoccus sp. HB09002 16S ribosomal RNA gene, partial sequence


description: domain/bacteria


description: domain/bacteria

family: Micromonosporaceae

full scientific name: Actinoplanes sediminis Qu et al. 2018

genus: Actinoplanes

order: Micromonosporales

species: Actinoplanes sediminis

synonym: Paractinoplanes sediminis

description: Actinoplanes sediminis strain M4I47 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Caryophanaceae

full scientific name: Solibacillus silvestris (Rheims et al. 1999) Krishnamurthi et al. 2009

genus: Solibacillus

species: Solibacillus silvestris

synonym: Bacillus silvestris

order: Bacillales


description: domain/bacteria

family: Gordoniaceae

full scientific name: <I>Gordonia</I> corrig. (ex Tsukamura 1971) Stackebrandt et al. 1989

genus: Gordonia

species: Gordonia sp.

synonym: Gordona

full scientific name: Gordonia sp.


description: domain/bacteria

family: Campylobacteraceae

full scientific name: <I>Sulfurospirillum</I> Schumacher et al. 1993

genus: Sulfurospirillum

order: Campylobacterales

species: Sulfurospirillum sp.

synonym: Dehalospirillum

full scientific name: Sulfurospirillum sp.


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Cupriavidus basilensis (Steinle et al. 1999) Vandamme and Coenye 2004

genus: Cupriavidus

order: Burkholderiales

species: Cupriavidus basilensis

synonym: Ralstonia basilensis

synonym: Wautersia basilensis

description: ASM83230v1 assembly for Cupriavidus basilensis 4G11


class: Methanomicrobia

description: domain/archaea

family: Methanomicrobiaceae

full scientific name: Methanoculleus chikugoensis Dianou et al. 2001

genus: Methanoculleus

keyword: phylum/methanobacteriota

order: Methanomicrobiales

phylum: Methanobacteriota

species: Methanoculleus chikugoensis

phylum: Euryarchaeota

description: Methanoculleus chikugoensis strain L21-II-0 16S ribosomal RNA gene, partial sequence

description: L21 assembly for Methanoculleus chikugoensis


description: domain/bacteria

family: Bacillaceae

full scientific name: <I>Geobacillus</I> Nazina et al. 2001

genus: Geobacillus

species: Geobacillus sp.

full scientific name: Geobacillus sp.


description: domain/bacteria

description: Geobacillus stearothermophilus strain 95 16S ribosomal RNA gene, partial sequence


class: Gammaproteobacteria

description: domain/bacteria

family: Yersiniaceae

full scientific name: Yersinia enterocolitica subsp. palearctica Neubauer et al. 2000

genus: Yersinia

order: Enterobacterales

order: Enterobacteriales, not validated


description: domain/bacteria

species: Yersinia enterocolitica subsp. palearctica


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Citrobacter gillenii Brenner et al. 2000

genus: Citrobacter

species: Citrobacter gillenii


description: domain/bacteria

family: Nocardioidaceae

full scientific name: Nocardioides sambongensis Hwang et al. 2020

genus: Nocardioides

phylum: Actinomycetota

species: Nocardioides sambongensis

full scientific name: Nocardioides sambongensis Hwang et al., 2019

order: Actinomycetales

phylum: Actinobacteria

description: Nocardioides sp. strain KUDC5002 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Streptosporangiaceae

full scientific name: Nonomuraea cypriaca Veyisoglu 2021

genus: Nonomuraea

order: Streptosporangiales

species: Nonomuraea cypriaca

description: ASM1564544v1 assembly for Nonomuraea cypriaca K274


description: domain/bacteria

full scientific name: Sphaerimonospora triticiradicis Han et al. 2019

genus: Sphaerimonospora

species: Sphaerimonospora triticiradicis

full scientific name: Sphaerimonospora triticiradicis Han et al., 2018


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Dorea longicatena Taras et al. 2002

genus: Dorea

order: Eubacteriales

species: Dorea longicatena

order: Clostridiales

strain designation: f-DLO


description: domain/bacteria


description: domain/bacteria

full scientific name: Dorea amylophila Hitch et al. 2023

species: Dorea amylophila


Matching level: strain

description: domain/bacteria

family: Fervidobacteriaceae

full scientific name: Thermosipho geolei L'Haridon et al. 2001

genus: Thermosipho

order: Thermotogales

species: Thermosipho geolei

description: Thermosipho sp. DSM 13256 partial 16S rRNA gene for 16S ribosomal RNA


description: domain/bacteria

family: Sphingomonadaceae

full scientific name: Sphingobium yanoikuyae (Yabuuchi et al. 1990) Takeuchi et al. 2001

genus: Sphingobium

order: Sphingomonadales

phylum: Pseudomonadota

species: Sphingobium yanoikuyae

synonym: Sphingomonas yanoikuyae

order: Pseudomonadales

phylum: Proteobacteria

description: Sphingomonas sp. XLDN2-5 16S ribosomal RNA gene, partial sequence

description: ASM22469v2 assembly for Sphingobium yanoikuyae XLDN2-5


description: domain/bacteria

family: Geodermatophilaceae

full scientific name: <I>Blastococcus</I> Ahrens and Moll 1970 (Approved Lists 1980)

genus: Blastococcus

order: Geodermatophilales

species: Blastococcus sp.

full scientific name: Blastococcus sp.

description: Blastococcus sp. strain DSM 46790 16S ribosomal RNA gene, partial sequence.

description: Blastococcus sp. DSM 46790

description: Blastococcus sp. DSM 46790


class: Bacilli

description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus succinus Lambert et al. 1998

genus: Staphylococcus

order: Caryophanales

phylum: Bacillota

species: Staphylococcus succinus

phylum: Firmicutes


description: domain/bacteria

family: Pseudoalteromonadaceae

full scientific name: <I>Pseudoalteromonas</I> Gauthier et al. 1995

genus: Pseudoalteromonas

order: Alteromonadales

species: Pseudoalteromonas sp.

full scientific name: Pseudoalteromonas sp.


class: Bacteroidia

description: domain/bacteria

family: Prevotellaceae

full scientific name: Prevotella pectinovora Nograsek et al. 2015

genus: Prevotella

order: Bacteroidales

species: Prevotella pectinovora

description: ASM83401v1 assembly for Prevotella pectinovora P4-76


description: domain/bacteria

family: Micrococcaceae

full scientific name: <I>Kocuria</I> Stackebrandt et al. 1995

genus: Kocuria

order: Micrococcales

species: Kocuria sp.

synonym: Pelczaria

full scientific name: Kocuria sp.


culture collection no.: DSM 21182, YIM kkny15

description: domain/bacteria

full scientific name: <I>Halobacillus</I> Spring et al. 1996

genus: Halobacillus

species: Halobacillus sp.

full scientific name: Halobacillus sp.

order: Bacillales

description: Halobacillus sp. YIM-kkny15 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

species: Staphylococcus equorum

full scientific name: Staphylococcus equorum Schleifer et al. 1985 emend. Jeong et al. 2013

strain designation: Stevemage 150518_C16


description: domain/bacteria

family: Legionellaceae

full scientific name: Legionella bozemanae corrig. (Garrity et al. 1980) Brenner et al. 1980

genus: Legionella

order: Legionellales

species: Legionella bozemanae

synonym: Legionella bozemanii

synonym: Fluoribacter bozemanae

full scientific name: Legionella bozemanae Brenner et al. 1980


description: domain/bacteria

full scientific name: Pandoraea pnomenusa Coenye et al. 2000

genus: Pandoraea

order: Burkholderiales

species: Pandoraea pnomenusa

description: Pandoraea pnomenusa strain RB38 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Tissierellaceae

full scientific name: <I>Tepidimicrobium</I> Slobodkin et al. 2006

genus: Tepidimicrobium

order: Tissierellales

species: Tepidimicrobium sp.

class: Tissierellia

full scientific name: Tepidimicrobium sp.

description: Clostridiaceae bacterium acetate-1 partial 16S rRNA gene, strain acetate-1


description: domain/bacteria

full scientific name: Legionella gormanii Morris et al. 1980

species: Legionella gormanii

synonym: Fluoribacter gormanii


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas salomonii Gardan et al. 2002

genus: Pseudomonas

species: Pseudomonas salomonii

description: Pseudomonas salomonii 16S ribosomal RNA gene, partial sequence

description: Pseudomonas salomonii ICMP 14252 gene for 16S ribosomal RNA, partial sequence.

description: IMG-taxon 2663763605 annotated assembly for Pseudomonas salomonii ICMP 14252

description: ASM173064v1 assembly for Pseudomonas salomonii LMG 22120


class: Deltaproteobacteria

description: domain/bacteria

family: Nannocystaceae

full scientific name: <I>Nannocystis</I> Reichenbach 1970 (Approved Lists 1980)

genus: Nannocystis

order: Myxococcales

species: Nannocystis sp.

full scientific name: Nannocystis sp.

strain designation: Na T64


description: domain/bacteria

full scientific name: Roseburia inulinivorans Duncan et al. 2006

genus: Roseburia

species: Roseburia inulinivorans


description: domain/bacteria

family: Idiomarinaceae

full scientific name: <I>Idiomarina</I> Ivanova et al. 2000

genus: Idiomarina

species: Idiomarina sp.

full scientific name: Idiomarina sp.


description: domain/bacteria

family: Bacillaceae

full scientific name: <I>Virgibacillus</I> Heyndrickx et al. 1998

genus: Virgibacillus

species: Virgibacillus sp.

synonym: Salibacillus

synonym: Paracerasibacillus

full scientific name: Virgibacillus sp.

description: Aquibacillus sediminis strain BH258 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Virgibacillus sp. JSM 078061 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

family: Polyangiaceae

full scientific name: <I>Polyangium</I> Link 1809 (Approved Lists 1980)

genus: Polyangium

order: Polyangiales

species: Polyangium sp.

synonym: Haploangium

full scientific name: Polyangium sp.


description: domain/bacteria

strain designation: PlVo 24


description: domain/bacteria

strain designation: PlHE 4


description: domain/bacteria

full scientific name: <I>Filobacillus</I> Schlesner et al. 2001

genus: Filobacillus

species: Filobacillus sp.

full scientific name: Filobacillus sp.


description: domain/bacteria

family: Bacteroidaceae

genus: Bacteroides

species: Bacteroides intestinalis

full scientific name: Bacteroides intestinalis Bakir et al. 2006 emend. Hahnke et al. 2016

description: ASM336367v2 assembly for Bacteroides intestinalis APC919/174


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Paraburkholderia phytofirmans (Sessitsch et al. 2005) Sawana et al. 2015

genus: Paraburkholderia

species: Paraburkholderia phytofirmans

synonym: Burkholderia phytofirmans

description: Burkholderia sp. BS115 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium tuberculostearicum Feurer et al. 2004

genus: Corynebacterium

order: Mycobacteriales

species: Corynebacterium tuberculostearicum

synonym: Corynebacterium tuberculostearicum


class: Flavobacteriia

description: domain/bacteria

family: Flavobacteriaceae

full scientific name: <I>Bizionia</I> Nedashkovskaya et al. 2005

genus: Bizionia

order: Flavobacteriales

species: Bizionia sp.

synonym: Algorimicrobium

full scientific name: Bizionia sp.

description: Bizionia palithoae strain KMM 6214 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Bacteroides finegoldii Bakir et al. 2006

species: Bacteroides finegoldii


description: domain/bacteria

family: Microbacteriaceae

full scientific name: <I>Plantibacter</I> Behrendt et al. 2002

genus: Plantibacter

species: Plantibacter sp.

full scientific name: Plantibacter sp.

order: Actinomycetales

description: ASM165045v1 assembly for Plantibacter sp. H53


description: domain/bacteria

family: Jonesiaceae

full scientific name: <I>Sanguibacter</I> Fernández-Garayzábal et al. 1995

genus: Sanguibacter

species: Sanguibacter sp.

full scientific name: Sanguibacter sp.


culture collection no.: DSM 21179, YIM kkny13

description: domain/bacteria

full scientific name: <I>Gracilibacillus</I> Wainø et al. 1999

genus: Gracilibacillus

species: Gracilibacillus sp.

full scientific name: Gracilibacillus sp.

description: Gracilibacillus sp. YIM-kkny13 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Gracilibacillus sp. JSM 078103 16S ribosomal RNA gene, partial sequence.


description: domain/bacteria

full scientific name: Pseudomonas mandelii Verhille et al. 1999

species: Pseudomonas mandelii

description: Pseudomonas mandelii strain 7HK4 16S ribosomal RNA gene, partial sequence


class: Alphaproteobacteria

description: domain/bacteria

family: Caulobacteraceae

full scientific name: <I>Brevundimonas</I> Segers et al. 1994

genus: Brevundimonas

order: Caulobacterales

species: Brevundimonas sp.

full scientific name: Brevundimonas sp.

order: Rhizobiales


description: domain/bacteria

full scientific name: Peribacillus alkalitolerans (Liu et al. 2018) Gupta et al. 2020

genus: Peribacillus

species: Peribacillus alkalitolerans

synonym: Bacillus alkalitolerans

description: Peribacillus alkalitolerans strain T3-209 16S ribosomal RNA gene, partial sequence

description: ASM1088212v1 assembly for Peribacillus alkalitolerans KCTC 33631


description: domain/bacteria

full scientific name: <I>Cupriavidus</I> Makkar and Casida 1987

genus: Cupriavidus

species: Cupriavidus sp.

full scientific name: Cupriavidus sp.

description: Cupriavidus sp. USMAA2-4 16S ribosomal RNA gene, complete sequence

description: ASM185430v1 assembly for Cupriavidus sp. USMAA2-4


description: domain/bacteria

full scientific name: Cupriavidus malaysiensis Ramachandran et al. 2026

species: Cupriavidus malaysiensis

full scientific name: Cupriavidus malaysiensis Ramachandran et al. 2018

strain designation: USMAA 1020

description: Cupriavidus malaysiensis 16S ribosomal RNA gene, complete sequence


description: domain/bacteria

description: Cupriavidus sp. USMAHM13 16S ribosomal RNA gene, complete sequence

description: ASM185428v1 assembly for Cupriavidus sp. USMAHM13


class: Halobacteria

description: domain/archaea

family: Haloferacaceae

full scientific name: <I>Halorubrum</I> McGenity and Grant 1996

genus: Halorubrum

order: Halobacteriales

species: Halorubrum sp.

synonym: Halorubrobacterium

family: Halorubraceae

full scientific name: Halorubrum sp.

description: Halorubrum sp. YIM 93749 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Roseobacteraceae

genus: Phaeobacter

order: Rhodobacterales

species: Phaeobacter inhibens

family: Rhodobacteraceae

full scientific name: Phaeobacter inhibens Martens et al. 2006 emend. Vandecandelaere et al. 2008 emend. Dogs et al. 2013

description: ASM288868v1 assembly for Phaeobacter inhibens P10


description: domain/bacteria

family: Erythrobacteraceae

full scientific name: <I>Erythrobacter</I> Shiba and Simidu 1982

genus: Erythrobacter

order: Sphingomonadales

species: Erythrobacter sp.

synonym: Porphyrobacter

synonym: Erythromicrobium

full scientific name: Erythrobacter sp.

description: Erythrobacter jejuensis strain BL170 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Erythrobacter sp. U1369-101122-SW159 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Erythrobacter sp. U1370-101126-SW186 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Oscillospiraceae

full scientific name: Porcipelethomonas ammoniilytica Hitch et al. 2025

genus: Porcipelethomonas

order: Eubacteriales

species: Porcipelethomonas ammoniilytica

order: Clostridiales


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Faecalicatena acetigenes Hitch et al. 2022

genus: Faecalicatena

species: Faecalicatena acetigenes

description: ASM2556717v1 assembly for Faecalicatena acetigenes H2_18


description: domain/bacteria

full scientific name: <I>Ruminococcus</I> Sijpesteijn 1948 (Approved Lists 1980)

genus: Ruminococcus

species: Ruminococcus sp.

full scientific name: Ruminococcus sp.


description: domain/bacteria

family: Methylocystaceae

full scientific name: <I>Methylosinus</I> (ex Whittenbury et al. 1970) Bowman et al. 1993

genus: Methylosinus

order: Hyphomicrobiales

species: Methylosinus sp.

full scientific name: Methylosinus sp.

description: Methylosinus sp. LW3 16S ribosomal RNA gene, partial sequence

description: ASM52711v1 assembly for Methylosinus sp. LW3


description: domain/bacteria

description: Methylosinus sp. LW4 16S ribosomal RNA gene, partial sequence

description: ASM37912v1 assembly for Methylosinus sp. LW4


description: domain/bacteria

description: Methylocystis sp. LW5 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Methylosinus sp. PW1 16S ribosomal RNA gene, partial sequence

description: ASM74521v1 assembly for Methylosinus sp. PW1


description: domain/bacteria

family: Yersiniaceae

full scientific name: Yersinia intermedia Brenner et al. 1981

genus: Yersinia

order: Enterobacterales

species: Yersinia intermedia

order: Enterobacteriales, not validated


class: Cytophagia

description: domain/bacteria

family: Hymenobacteraceae

full scientific name: Hymenobacter gelipurpurascens Buczolits et al. 2006

genus: Hymenobacter

order: Cytophagales

species: Hymenobacter gelipurpurascens


description: domain/bacteria

full scientific name: <I>Maribacter</I> Nedashkovskaya et al. 2004

genus: Maribacter

species: Maribacter sp.

synonym: Maripseudobacter

full scientific name: Maribacter sp.

description: Marinobacter sp. DQHS-13 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus saprophyticus (Fairbrother 1940) Shaw et al. 1951 (Approved Lists 1980)

genus: Staphylococcus

order: Caryophanales

species: Staphylococcus saprophyticus

synonym: Staphylococcus saprophyticus

full scientific name: Staphylococcus saprophyticus subsp. bovis Hájek et al. 1996

order: Bacillales


description: domain/bacteria

synonym: Staphylococcus saprophyticus subsp. bovis


description: domain/bacteria

full scientific name: Marinibacterium anthonyi Howat et al. 2018

genus: Marinibacterium

species: Marinibacterium anthonyi

full scientific name: Marinibacterium anthonyi Petersen et al., 2019

order: Not assigned to order

description: ASM321773v2 assembly for Marinibacterium anthonyi La 6


description: domain/bacteria

strain designation: La 6


class: Clostridia

description: domain/bacteria

full scientific name: Coprococcus aceti Hitch et al. 2025

genus: Coprococcus

species: Coprococcus aceti

full scientific name: Coprococcus eutactus Holdeman and Moore 1974

species: Coprococcus eutactus

description: ASM1658641v1 assembly for Coprococcus eutactus JCM 31265


description: domain/bacteria

full scientific name: Mediterraneibacter gnavus (Moore et al. 1976) Togo et al. 2023

genus: Mediterraneibacter

species: Mediterraneibacter gnavus

synonym: Ruminococcus gnavus


description: domain/bacteria

family: Legionellaceae

full scientific name: Legionella quinlivanii Benson et al. 1990

genus: Legionella

order: Legionellales

species: Legionella quinlivanii


culture collection no.: DSM 9415, NCIMB 848

description: domain/bacteria

family: Pseudoalteromonadaceae

full scientific name: Pseudoalteromonas piscicida (ex Bein 1954) Gauthier et al. 1995

genus: Pseudoalteromonas

order: Alteromonadales

species: Pseudoalteromonas piscicida

synonym: Pseudomonas piscicida

synonym: Flavobacterium piscicida


class: Spirochaetia

description: domain/bacteria

family: Borreliaceae

full scientific name: Borrelia lusitaniae Le Fleche et al. 1997

genus: Borrelia

keyword: phylum/spirochaetota

order: Spirochaetales

phylum: Spirochaetota

species: Borrelia lusitaniae

synonym: Borreliella lusitaniae

phylum: Spirochaetes

description: Borreliella lusitaniae strain Poti B2 16S ribosomal RNA, partial sequence


description: domain/bacteria

family: Paracoccaceae

full scientific name: Paracoccus yeei corrig. Daneshvar et al. 2003

genus: Paracoccus

species: Paracoccus yeei

synonym: Paracoccus yeeii

full scientific name: Paracoccus yeei Daneshvar et al. 2003


description: domain/bacteria

family: Acetobacteraceae

full scientific name: Roseomonas gilardii Rihs et al. 1998

genus: Roseomonas

order: Rhodospirillales

species: Roseomonas gilardii

full scientific name: Roseomonas gilardii Rihs et al. 1998 emend. Sánchez-Porro et al. 2009

description: ASM3225161v1 assembly for Roseomonas gilardii DSM 103800


description: domain/bacteria

full scientific name: Roseomonas mucosa Han et al. 2003

species: Roseomonas mucosa

full scientific name: Roseomonas mucosa Han et al. 2003 emend. Sánchez-Porro et al. 2009

order: Rhizobiales

description: ASM3225201v1 assembly for Roseomonas mucosa DSM 102829


description: domain/bacteria


description: domain/bacteria

description: ASM3225153v1 assembly for Roseomonas mucosa DSM 103585


description: domain/bacteria

description: ASM3225163v1 assembly for Roseomonas mucosa DSM 103586


description: domain/bacteria

description: ASM3225165v1 assembly for Roseomonas mucosa DSM 103799


description: domain/bacteria

description: ASM3225157v1 assembly for Roseomonas mucosa DSM 103801


description: domain/bacteria

description: ASM3225159v1 assembly for Roseomonas mucosa DSM 103802


description: domain/bacteria

description: ASM3225155v1 assembly for Roseomonas mucosa DSM 105836


description: domain/bacteria

family: Bacillaceae

full scientific name: Bacillus safensis subsp. safensis (Satomi et al. 2006) Abril et al. 2019

genus: Bacillus

species: Bacillus safensis subsp. safensis


description: domain/bacteria

family: Rikenellaceae

full scientific name: Alistipes onderdonkii subsp. onderdonkii (Song et al. 2006) Sakamoto et al. 2020

genus: Alistipes

order: Bacteroidales


description: domain/bacteria

species: Alistipes onderdonkii subsp. onderdonkii


class: Not assigned to order

family: Not assigned to family

full scientific name: Rhizobiales (not further classified)

genus: Rhizobiales

phylum: Not assigned to order

species: Rhizobiales (not further classified)

description: Thermophilic bacterium Matomo55 gene for 16S rRNA, partial sequence


full scientific name: Rhodobacteraceae (not further classified)

genus: Rhodobacteraceae

description: Phaeobacter sp. G8 16S ribosomal RNA gene, partial sequence


species: Rhodobacteraceae (not further classified)

description: Roseobacter sp. U1368-101106-SW101 16S ribosomal RNA gene, partial sequence


description: Thalassolituus sp. H61 16S ribosomal RNA gene, partial sequence


family: Rhizobiaceae

full scientific name: Rhizobiaceae not further classified

genus: Rhizobiaceae

species: Rhizobiaceae not further classified

description: Rhizobiales bacterium CL-DNM10 16S ribosomal RNA gene, partial sequence


class: Betaproteobacteria

description: domain/bacteria

family: Zoogloeaceae

full scientific name: Aromatoleum bremense Rabus et al. 2019

genus: Aromatoleum

order: Rhodocyclales

species: Aromatoleum bremense

description: ASM1789436v1 assembly for Aromatoleum bremense PbN1

description: ASM1291092v1 assembly for Aromatoleum bremense PbN1


description: domain/bacteria

full scientific name: Aromatoleum aromaticum Rabus et al. 2019

species: Aromatoleum aromaticum

description: ASM1291091v1 assembly for Aromatoleum aromaticum pCyN1

description: ASM2370419v1 assembly for Aromatoleum aromaticum pCyN1


description: domain/bacteria

description: ASM2596v1 assembly for Aromatoleum aromaticum EbN1


description: domain/bacteria

full scientific name: Aromatoleum petrolei Rabus et al. 2019

species: Aromatoleum petrolei

description: ASM1789438v1 assembly for Aromatoleum petrolei ToN1

description: ASM1291098v1 assembly for Aromatoleum petrolei ToN1


description: domain/bacteria

family: Halomonadaceae

full scientific name: <I>Halomonas</I> Vreeland et al. 1980

genus: Halomonas

order: Oceanospirillales

species: Halomonas sp.

synonym: Volcaniella

synonym: Franzmannia

synonym: Onishia

synonym: Billgrantia

synonym: Vreelandella

synonym: Deleya

synonym: Litchfieldella

synonym: Bisbaumannia

full scientific name: Halomonas sp.

description: Halomonas sp. G5-11 16S ribosomal RNA gene, partial sequence

description: ASM1206284v1 assembly for Halomonas salinarum G5-11

description: Halomonas sp. G5-11


description: domain/bacteria

full scientific name: Halomonas urmiana Khan et al. 2020

species: Halomonas urmiana

strain designation: Tabriz3, TBZ3

description: Halomonas sp. TBZ3 16S ribosomal RNA gene, partial sequence

description: ASM578018v1 assembly for Halomonas urmiana TBZ3


description: domain/bacteria

description: Halomonas sp. YCSA31-1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Halomonas sp. BH047 16S ribosomal RNA gene, partial sequence


culture collection no.: DSM 103116, Marseille-P2426

description: domain/bacteria

full scientific name: Vreelandella massiliensis de la Haba et al. 2024

genus: Vreelandella

species: Vreelandella massiliensis

synonym: Halomonas massiliensis

full scientific name: Vreelandella massiliensis

description: Halomonas sp. Marseille-P2426 partial 16S rRNA gene, strain Marseille-P2426T

description: PRJEB18749 assembly for Vreelandella massiliensis Marseille-P2426


description: domain/bacteria

family: Microbacteriaceae

full scientific name: <I>Agrococcus</I> Groth et al. 1996

genus: Agrococcus

order: Micrococcales

species: Agrococcus sp.

full scientific name: Agrococcus sp.

order: Actinomycetales


description: domain/bacteria

family: Bacteroidaceae

genus: Bacteroides

species: Bacteroides cellulosilyticus

full scientific name: Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016


description: domain/bacteria

family: Spongiibacteraceae

full scientific name: <I>Spongiibacter</I> Graeber et al. 2008

genus: Spongiibacter

order: Cellvibrionales

species: Spongiibacter sp.

full scientific name: Spongiibacter sp.

description: Gamma proteobacterium CL-SK8 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Alcanivoracaceae

full scientific name: Pelagibaculum spongiae Knobloch et al. 2019

genus: Pelagibaculum

species: Pelagibaculum spongiae

description: Pelagibaculum spongiae strain Hp12 16S ribosomal RNA gene, partial sequence

description: ASM309731v1 assembly for Pelagibaculum spongiae Hp12


description: domain/bacteria

family: Caryophanaceae

full scientific name: <I>Jeotgalibacillus</I> Yoon et al. 2001

genus: Jeotgalibacillus

species: Jeotgalibacillus sp.

synonym: Marinibacillus

full scientific name: Jeotgalibacillus sp.


description: domain/bacteria

family: Bartonellaceae

full scientific name: Brucella haematophila (Kämpfer et al. 2007) Hördt et al. 2020

genus: Brucella

order: Hyphomicrobiales

species: Brucella haematophila

synonym: Ochrobactrum haematophilum

family: Brucellaceae


description: domain/bacteria

full scientific name: <I>Chromohalobacter</I> Ventosa et al. 1989

genus: Chromohalobacter

species: Chromohalobacter sp.

full scientific name: Chromohalobacter sp.


description: domain/bacteria

family: Erythrobacteraceae

full scientific name: <I>Novosphingobium</I> Takeuchi et al. 2001

genus: Novosphingobium

order: Sphingomonadales

species: Novosphingobium sp.

synonym: Flavinovosphingobium

synonym: Pseudonovosphingobium

synonym: Agrinovosphingobium

synonym: Paranovosphingobium

synonym: Alterinovosphingobium

full scientific name: Novosphingobium sp.

description: ASM434130v1 assembly for Novosphingobium sp. ST904

description: ASM129810v1 assembly for Novosphingobium sp. ST904


description: domain/bacteria

family: Comamonadaceae

full scientific name: Variovorax boronicumulans Miwa et al. 2008

genus: Variovorax

order: Burkholderiales

species: Variovorax boronicumulans


class: Mollicutes

description: domain/bacteria

family: Mycoplasmataceae

full scientific name: Mycoplasma enhydrae Volokhov et al. 2019

genus: Mycoplasma

keyword: phylum/mycoplasmatota

order: Mycoplasmatales

phylum: Mycoplasmatota

species: Mycoplasma enhydrae

phylum: Tenericutes

description: Mycoplasma enhydrae strain 6243-11 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Mycoplasma enhydrae strain 6803-13 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Mycoplasma enhydrae strain 6207-11 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: <I>Mycoplasma</I> Nowak 1929 (Approved Lists 1980)

species: Mycoplasma sp.

full scientific name: Mycoplasma sp.

description: Mycoplasma enhydrae strain 6182-11 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Mycoplasma enhydrae strain 3839-13 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Shewanellaceae

full scientific name: <I>Shewanella</I> MacDonell and Colwell 1986

genus: Shewanella

species: Shewanella sp.

full scientific name: Shewanella sp.


description: domain/bacteria

family: Stappiaceae

full scientific name: <I>Stappia</I> Uchino et al. 1999

genus: Stappia

species: Stappia sp.

full scientific name: Stappia sp.

order: Rhodobacterales


description: domain/bacteria

family: Yersiniaceae

genus: Yersinia

order: Enterobacterales

species: Yersinia massiliensis

full scientific name: Yersinia massiliensis Merhej et al. 2008 emend. Souza et al. 2011

order: Enterobacteriales, not validated


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Robinsoniella peoriensis Cotta et al. 2009

genus: Robinsoniella

order: Eubacteriales

species: Robinsoniella peoriensis

description: ASM551999v1 assembly for Robinsoniella peoriensis DSM 106044


class: Actinomycetes

description: domain/bacteria

family: Micrococcaceae

full scientific name: Sinomonas albida (Ding et al. 2009) Zhou et al. 2012

genus: Sinomonas

species: Sinomonas albida

synonym: Arthrobacter albidus


description: domain/bacteria

full scientific name: Sinomonas echigonensis (Ding et al. 2009) Zhou et al. 2012

species: Sinomonas echigonensis

synonym: Arthrobacter echigonensis

class: Actinobacteria


description: domain/bacteria

full scientific name: <I>Lysinibacillus</I> Ahmed et al. 2007

genus: Lysinibacillus

order: Caryophanales

species: Lysinibacillus sp.

full scientific name: Lysinibacillus sp.

order: Bacillales

description: Lysinibacillus sp. CL1.22 partial 16S rRNA gene, strain CL1.22


description: domain/bacteria

family: Kineosporiaceae

full scientific name: <I>Angustibacter</I> Tamura et al. 2010

genus: Angustibacter

order: Kineosporiales

species: Angustibacter sp.

full scientific name: Angustibacter sp.

description: Oryzihumus sp. KO_CM103 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Tannerellaceae

full scientific name: <I>Parabacteroides</I> Sakamoto and Benno 2006

genus: Parabacteroides

order: Bacteroidales

species: Parabacteroides sp.

full scientific name: Parabacteroides sp.


description: domain/bacteria

species: Parabacteroides merdae

synonym: Bacteroides merdae

full scientific name: Parabacteroides merdae (Johnson et al. 1986) Sakamoto and Benno 2006 emend. Hahnke et al. 2016


description: domain/bacteria

family: Moraxellaceae

full scientific name: Acinetobacter pittii Nemec et al. 2011

genus: Acinetobacter

order: Pseudomonadales

species: Acinetobacter pittii

description: ASM174343v1 assembly for Acinetobacter pittii IIF1SW-P1


description: domain/bacteria

family: Peptostreptococcaceae

full scientific name: <I>Clostridioides</I> Lawson et al. 2016

genus: Clostridioides

order: Peptostreptococcales

species: Clostridioides sp.

full scientific name: Clostridioides sp.

order: Clostridiales


class: Negativicutes

description: domain/bacteria

family: Acidaminococcaceae

full scientific name: Phascolarctobacterium succinatutens Watanabe et al. 2012

genus: Phascolarctobacterium

order: Acidaminococcales

species: Phascolarctobacterium succinatutens

order: Selenomonadales

description: Phascolarctobacterium succinatutens gene for 16S rRNA, partial sequence


description: domain/bacteria

description: Phascolarctobacterium succinatutens YIT 12067 gene for 16S rRNA, partial sequence

description: ASM18817v1 assembly for Phascolarctobacterium succinatutens YIT 12067

description: Phascolarctobacterium succinatutens 82G5 assembly for Phascolarctobacterium faecium


description: domain/bacteria

full scientific name: Blautia brookingsii Ghimire et al. 2020

genus: Blautia

species: Blautia brookingsii

description: Blautia brookingsii strain SG772 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: <I>Blautia</I> Liu et al. 2008

species: Blautia sp.

full scientific name: Blautia sp.

order: Clostridia, not assigned to order

strain designation: f-ROB


description: domain/bacteria


description: domain/bacteria

family: Carnobacteriaceae

full scientific name: <I>Trichococcus</I> Scheff et al. 1984

genus: Trichococcus

order: Lactobacillales

species: Trichococcus sp.

synonym: Lactosphaera

full scientific name: Trichococcus sp.


description: domain/bacteria

family: Streptosporangiaceae

full scientific name: Nonomuraea thailandensis Sripreechasak et al. 2013

genus: Nonomuraea

order: Streptosporangiales

species: Nonomuraea thailandensis

order: Actinomycetales

description: Nonomuraea thailandensis gene for 16S rRNA, partial sequence, strain: KC-061

description: ASM2417216v1 assembly for Nonomuraea thailandensis DSM 46694

description: ASM3954358v1 assembly for Nonomuraea thailandensis JCM 18408

description: ASM4266056v1 assembly for Nonomuraea thailandensis JCM 18408

description: ASM4267472v1 assembly for Nonomuraea thailandensis JCM 18408


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces hundungensis Nimaichand et al. 2013

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces hundungensis

description: Streptomyces hundungensis strain MBRL 251 16S ribosomal RNA gene, partial sequence

description: ASM3953810v1 assembly for Streptomyces hundungensis JCM 17577


description: domain/bacteria

full scientific name: Fusicatenibacter saccharivorans Takada et al. 2013

genus: Fusicatenibacter

species: Fusicatenibacter saccharivorans


description: domain/bacteria

full scientific name: Rothia endophytica Xiong et al. 2013

genus: Rothia

order: Micrococcales

species: Rothia endophytica


class: Gammaproteobacteria

description: domain/bacteria

family: Lysobacteraceae

full scientific name: Luteimonas abyssi Fan et al. 2014

genus: Luteimonas

order: Lysobacterales

species: Luteimonas abyssi

order: Xanthomonadales


description: domain/bacteria

family: Peptoniphilaceae

full scientific name: <I>Peptoniphilus</I> Ezaki et al. 2001

genus: Peptoniphilus

order: Tissierellales

species: Peptoniphilus sp.

synonym: Schleiferella

full scientific name: Peptoniphilus sp.

description: D1G assembly for Peptoniphilus sp. ING2-D1G


description: domain/bacteria

full scientific name: Aedoeadaptatus acetigenes Hitch et al. 2022

genus: Aedoeadaptatus

species: Aedoeadaptatus acetigenes

order: Eubacteriales

description: ASM2556698v1 assembly for Aedoeadaptatus acetigenes E51


description: domain/bacteria

family: Comamonadaceae

full scientific name: Xenophilus arseniciresistens Li et al. 2014

genus: Xenophilus

order: Burkholderiales

species: Xenophilus arseniciresistens

description: Xenophilus arseniciresistens strain YW8 16S ribosomal RNA gene, partial sequence

description: ASM2802387v1 assembly for Xenophilus arseniciresistens YW8


class: Bacilli

description: domain/bacteria

family: Alicyclobacillaceae

full scientific name: Alicyclobacillus cellulosilyticus Kusube et al. 2014

genus: Alicyclobacillus

order: Caryophanales

species: Alicyclobacillus cellulosilyticus

synonym: Paenalicyclobacillus cellulosilyticus

order: Bacillales

strain designation: Sueoka

description: Alicyclobacillus cellulosilyticus gene for 16S rRNA, partial sequence

description: ASM1464731v1 assembly for Alicyclobacillus cellulosilyticus JCM 18487

description: ASM2052133v1 assembly for Alicyclobacillus cellulosilyticus Sueoka


description: domain/bacteria

full scientific name: Streptosporangium jomthongense Intra et al. 2014

genus: Streptosporangium

species: Streptosporangium jomthongense

description: Streptosporangium jomthongense strain 30EHS 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Klebsiella quasipneumoniae subsp. similipneumoniae Brisse et al. 2014

genus: Klebsiella

order: Enterobacterales

synonym: Klebsiella alba

order: Enterobacteriales, not validated

description: ASM174345v1 assembly for Klebsiella quasipneumoniae IF3SW-P1

description: ASM2231341v2 assembly for Klebsiella quasipneumoniae subsp. similipneumoniae IF3SW-P1


description: domain/bacteria

family: Glycomycetaceae

full scientific name: Glycomyces artemisiae Zhang et al. 2014

genus: Glycomyces

order: Glycomycetales

species: Glycomyces artemisiae

description: Glycomyces artemisiae strain IXS4 16S ribosomal RNA gene, complete sequence

description: ASM300295v1 assembly for Glycomyces artemisiae CGMCC 4.7067


class: Saprospiria

description: domain/bacteria

family: Lewinellaceae

full scientific name: Phaeodactylibacter xiamenensis Chen et al. 2014

genus: Phaeodactylibacter

order: Saprospirales

species: Phaeodactylibacter xiamenensis

description: ASM75902v1 assembly for Phaeodactylibacter xiamenensis KD52


description: domain/bacteria

family: Acetobacteraceae

full scientific name: Neoroseomonas alkaliterrae (Dong et al. 2014) Rai et al. 2022

genus: Neoroseomonas

order: Rhodospirillales

species: Neoroseomonas alkaliterrae

synonym: Roseomonas alkaliterrae

full scientific name: Roseomonas alkaliterrae Dong et al. 2014

genus: Roseomonas

order: Rhizobiales

species: Roseomonas alkaliterrae

description: Neoroseomonas alkaliterrae strain YIM 78007 16S ribosomal RNA gene, partial sequence

description: ASM1419919v1 assembly for Neoroseomonas alkaliterrae DSM 25895


description: domain/bacteria

family: Roseobacteraceae

full scientific name: Roseovarius gaetbuli Park et al. 2014

genus: Roseovarius

order: Rhodobacterales

species: Roseovarius gaetbuli

family: Rhodobacteraceae

description: Roseovarius gaetbuli strain YM-20 16S ribosomal RNA gene, partial sequence

description: R.gaetbulli_CECT8370_Spades_Prokka assembly for Roseovarius gaetbuli CECT 8370


description: domain/bacteria

family: Spongiibacteraceae

full scientific name: Zhongshania aliphaticivorans Lo et al. 2014

genus: Zhongshania

order: Cellvibrionales

species: Zhongshania aliphaticivorans

order: Pseudomonadales

description: Zhongshania aliphaticivorans strain SM-2 16S ribosomal RNA gene, partial sequence

description: ASM158625v1 assembly for Zhongshania aliphaticivorans SM-2


description: domain/bacteria

family: Granulosicoccaceae

full scientific name: Granulosicoccus undariae Park et al. 2015

genus: Granulosicoccus

order: Chromatiales

species: Granulosicoccus undariae

description: Granulosicoccus undariae strain W-BA3 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Arenicellaceae

full scientific name: Perspicuibacter marinus Teramoto et al. 2015

genus: Perspicuibacter

order: Arenicellales

species: Perspicuibacter marinus

description: Perspicuibacter marinus gene for 16S ribosomal RNA, partial sequence


class: Erysipelotrichia

description: domain/bacteria

family: Erysipelotrichaceae

full scientific name: Catenisphaera adipataccumulans Kanno et al. 2015

genus: Catenisphaera

order: Erysipelotrichales

species: Catenisphaera adipataccumulans

description: Catenisphaera adipataccumulans gene for 16S rRNA, partial sequence

description: ASM1420275v1 assembly for Catenisphaera adipataccumulans DSM 25799


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Flavicella marina Teramoto and Nishijima 2015

genus: Flavicella

order: Flavobacteriales

species: Flavicella marina

description: Flavicella marina gene for 16S ribosomal RNA, partial sequence

description: ASM919321v1 assembly for Flavicella marina 2A-7


description: domain/bacteria

family: Paracoccaceae

full scientific name: Frigidibacter albus Li and Zhou 2015

genus: Frigidibacter

species: Frigidibacter albus

strain designation: SLM-1, SP32

description: Frigidibacter albus strain SLM-1 16S ribosomal RNA gene, partial sequence

description: ASM988109v1 assembly for Frigidibacter albus SP32

description: ASM1464039v1 assembly for Frigidibacter albus CGMCC 1.13995

description: ASM990816v1 assembly for Frigidibacter albus SP32

description: ASM1099379v1 assembly for Frigidibacter albus SP32


description: domain/bacteria

full scientific name: Siccibacter colletis Jackson et al. 2015

genus: Siccibacter

species: Siccibacter colletis

synonym: Siccibacter colletis

synonym: Cronobacter colletis

description: Siccibacter colletis partial 16S rRNA gene, type strain 1383T

description: C_colletis_1383 assembly for Siccibacter colletis 1383


description: domain/bacteria

family: Cellvibrionaceae

full scientific name: Simiduia aestuariiviva Park et al. 2015

genus: Simiduia

species: Simiduia aestuariiviva

order: Cellvibrionaceae, not assigned to order

description: Simiduia aestuariiviva strain J-MY2 16S ribosomal RNA gene, partial sequence

description: ASM1419247v1 assembly for Simiduia aestuariiviva CECT 8571


description: domain/bacteria

family: Micromonosporaceae

full scientific name: Micromonospora costi Thawai 2015

genus: Micromonospora

order: Micromonosporales

species: Micromonospora costi

order: Actinomycetales

description: Micromonospora costi gene for 16S ribosomal RNA, partial sequence

description: ASM362665v1 assembly for Micromonospora costi CS1-12


class: Chlamydiia

description: domain/bacteria

family: Chlamydiaceae

full scientific name: Chlamydia avium Sachse et al. 2015

genus: Chlamydia

keyword: phylum/chlamydiota

order: Chlamydiales

phylum: Chlamydiota

species: Chlamydia avium

phylum: Chlamydiae

description: Chlamydia avium 10DC88 16S ribosomal RNA gene, partial sequence

description: Chlamydia avium strain 12DC97 16S ribosomal RNA gene, partial sequence.

description: ASM58387v1 assembly for Chlamydia avium 10DC88


description: domain/bacteria

description: Chlamydia avium strain 11DC96 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Yersiniaceae

full scientific name: Rahnella variigena Brady et al. 2017

genus: Rahnella

order: Enterobacterales

species: Rahnella variigena


description: domain/bacteria

family: Leucotrichaceae

full scientific name: Leucothrix pacifica Zhang et al. 2015

genus: Leucothrix

order: Beggiatoales

species: Leucothrix pacifica

family: Thiotrichaceae

order: Thiotrichales

description: Leucothrix pacifica strain XH122 16S ribosomal RNA gene, partial sequence

description: Leucothrix sp. U1371-101227-XH122 16S ribosomal RNA gene, partial sequence

description: ASM317287v1 assembly for Leucothrix pacifica JCM 18388


description: domain/bacteria

full scientific name: Phaeodactylibacter luteus Lei et al. 2015

order: Saprospirales

phylum: Bacteroidota

species: Phaeodactylibacter luteus

description: Phaeodactylibacter luteus strain GYP20 16S ribosomal RNA gene, partial sequence

description: ASM799304v1 assembly for Phaeodactylibacter luteus KCTC 42180


description: domain/bacteria

family: Pseudonocardiaceae

full scientific name: <I>Actinophytocola</I> Indananda et al. 2010

genus: Actinophytocola

order: Pseudonocardiales

species: Actinophytocola sp.

full scientific name: Actinophytocola sp.


description: domain/bacteria

family: Dermabacteraceae

full scientific name: <I>Dermabacter</I> Jones and Collins 1989

genus: Dermabacter

order: Micrococcales

species: Dermabacter sp.

full scientific name: Dermabacter sp.


description: domain/bacteria

family: Kiloniellaceae

full scientific name: Limibacillus halophilus Kim et al. 2015

genus: Limibacillus

order: Rhodospirillales

species: Limibacillus halophilus

family: Rhodovibrionaceae

description: Limibacillus halophilus strain CAU 1121 16S ribosomal RNA gene, partial sequence

description: ASM1419177v1 assembly for Limibacillus halophilus CECT 8803


description: domain/bacteria

family: Erythrobacteraceae

full scientific name: <I>Croceicoccus</I> Xu et al. 2009

genus: Croceicoccus

order: Sphingomonadales

species: Croceicoccus sp.

full scientific name: Croceicoccus sp.


class: Bacteroidia

description: domain/bacteria

family: Muribaculaceae

full scientific name: Muribaculum intestinale Lagkouvardos et al. 2016

genus: Muribaculum

order: Bacteroidales

species: Muribaculum intestinale

order: Bacteroidia, not assigned to order

phylum: Bacteroidetes

description: Muribaculum intestinale strain YL5 16S ribosomal RNA gene, partial sequence

description: ASM302484v1 assembly for Muribaculum intestinale DSM 100739


description: domain/bacteria

description: Muribaculum intestinale strain YL7 16S ribosomal RNA gene, partial sequence

description: ASM302485v1 assembly for Muribaculum intestinale DSM 100746


class: Alphaproteobacteria

description: domain/bacteria

family: Rhizobiaceae

full scientific name: Pseudorhizobium marinum (Liu et al. 2015) Lassalle et al. 2021

genus: Pseudorhizobium

order: Hyphomicrobiales

species: Pseudorhizobium marinum

synonym: Rhizobium marinum

full scientific name: Rhizobium marinum Liu et al. 2015

genus: Rhizobium

order: Rhizobiales

species: Rhizobium marinum

description: Pseudorhizobium marinum strain MGL06 16S ribosomal RNA gene, partial sequence

description: SOAPdenovo for version 1.05 of Rhizobium marinus MGL06 assembly for Pseudorhizobium marinum MGL06


description: domain/bacteria

family: Promicromonosporaceae

full scientific name: <I>Oerskovia</I> Prauser et al. 1970 (Approved Lists 1980)

genus: Oerskovia

species: Oerskovia sp.

full scientific name: Oerskovia sp.

strain designation: Stevenage 150518_C18


description: domain/bacteria


description: domain/bacteria

family: Microbacteriaceae

full scientific name: <I>Microcella</I> Tiago et al. 2005

genus: Microcella

species: Microcella sp.

synonym: Chryseoglobus

synonym: Marinisubtilis

synonym: Yonghaparkia

full scientific name: Yonghaparkia sp.

genus: Yonghaparkia

species: Yonghaparkia sp.

strain designation: Stevenage 150518_C4


description: domain/bacteria

family: Acetobacteraceae

full scientific name: <I>Acidiphilium</I> Harrison 1981

genus: Acidiphilium

species: Acidiphilium sp.

full scientific name: Acidiphilium sp.

description: Acidiphilium sp. JA12-A1 ACIDI_244c, whole genome shotgun sequence

description: ASM72470v2 assembly for Acidiphilium sp. JA12-A1


description: domain/bacteria

family: Spongiibacteraceae

full scientific name: Sinobacterium norvegicum Diéguez et al. 2016

genus: Sinobacterium

order: Cellvibrionales

species: Sinobacterium norvegicum

order: Pseudomonadales

description: Sinobacterium norvegicum partial 16S rRNA gene, strain type strain: CM4

description: Sinobacterium_norvegicum_CECT_8267_Spades_Prokka assembly for Sinobacterium norvegicum CECT 8267, type strain


class: Flavobacteriia

description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Subsaxibacter arcticus Xu et al. 2016

genus: Subsaxibacter

order: Flavobacteriales

species: Subsaxibacter arcticus

description: Subsaxibacter arcticus 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Sphingosinicellaceae

full scientific name: Sphingoaurantiacus polygranulatus Kim et al. 2016

genus: Sphingoaurantiacus

species: Sphingoaurantiacus polygranulatus

description: Sphingoaurantiacus polygranulatus 16S ribosomal RNA gene, partial sequence


class: Epsilonproteobacteria

description: domain/bacteria

family: Arcobacteraceae

full scientific name: Malaciobacter pacificus corrig. (Zhang et al. 2016) Pérez-Cataluña et al. 2019

genus: Malaciobacter

order: Campylobacterales

species: Malaciobacter pacificus

synonym: Malacobacter pacificus

synonym: Arcobacter pacificus

full scientific name: Arcobacter pacificus Zhang et al. 2016

genus: Arcobacter

species: Arcobacter pacificus

description: Malaciobacter pacificus strain SW028 16S ribosomal RNA gene, partial sequence

description: ASM421479v1 assembly for Malaciobacter pacificus LMG 26638

description: ASM1463635v1 assembly for Malaciobacter pacificus CGMCC 1.11011


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Enterobacter bugandensis Doijad et al. 2016

genus: Enterobacter

species: Enterobacter bugandensis

order: Enterobacteriales, not validated

description: ASM289072v1 assembly for Enterobacter bugandensis IF2SW-P2


description: domain/bacteria

family: Bartonellaceae

full scientific name: Bartonella heixiaziensis Li et al. 2016

genus: Bartonella

species: Bartonella heixiaziensis

description: Bartonella heixiaziensis strain CR90HXZ 16S ribosomal RNA gene, partial sequence

description: ASM5043324v1 assembly for Bartonella heixiaziensis DSM 100695

description: Bartonella heixiaziensis DSM 100695


description: domain/bacteria

full scientific name: Bartonella fuyuanensis Li et al. 2016

species: Bartonella fuyuanensis

description: Bartonella fuyuanensis strain AA137HXZ 16S ribosomal RNA gene, partial sequence

description: ASM1419725v1 assembly for Bartonella fuyuanensis DSM 100694


description: domain/bacteria

full scientific name: Pacificimonas flava corrig. Liu et al. 2016

genus: Pacificimonas

species: Pacificimonas flava

synonym: Pacificamonas flava

full scientific name: Pacificimonas flava Liu et al. 2016

description: Pacificimonas flava strain JLT2015 16S ribosomal RNA gene, partial sequence

description: ASM1420220v1 assembly for Pacificimonas flava DSM 107612


description: domain/bacteria

full scientific name: Capnocytophaga canis Renzi et al. 2016

genus: Capnocytophaga

species: Capnocytophaga canis

description: Capnocytophaga canis 16S ribosomal RNA, partial sequence


description: domain/bacteria

family: Roseobacteraceae

full scientific name: Amylibacter ulvae Nedashkovskaya et al. 2016

genus: Amylibacter

order: Rhodobacterales

species: Amylibacter ulvae

synonym: Paramylibacter ulvae

family: Rhodobacteraceae

description: Amylibacter ulvae strain KMM 6515 16S ribosomal RNA gene, partial sequence

description: ASM1465265v1 assembly for Paramylibacter ulvae KCTC 32465


description: domain/bacteria

family: Micromonosporaceae

full scientific name: Micromonospora soli Thawai et al. 2016

genus: Micromonospora

order: Micromonosporales

species: Micromonospora soli

order: Actinomycetales

description: Micromonospora soli gene for 16S ribosomal RNA, partial sequence


description: domain/bacteria

family: Helicobacteraceae

full scientific name: Helicobacter apri Zanoni et al. 2016

genus: Helicobacter

species: Helicobacter apri


description: domain/bacteria

family: Tsukamurellaceae

full scientific name: Tsukamurella serpentis Tang et al. 2016

genus: Tsukamurella

order: Mycobacteriales

species: Tsukamurella serpentis

description: Tsukamurella serpentis strain HKU55 16S ribosomal RNA gene, partial sequence

description: Tsukamurella serpentis strain JCM 31018 16S ribosomal RNA gene, partial sequence.


class: Chroococcophyceae

description: domain/bacteria

family: Nodulariaceae

full scientific name: Trichormus variabilis (Kützing ex Bornet and Flahault 1886) Komárek and Anagnostidis 1989

genus: Trichormus

keyword: phylum/cyanobacteriota

order: Nostocales

phylum: Cyanobacteriota

species: Trichormus variabilis

synonym: Anabaena variabilis

class: Hormogoneae

family: Nostocaceae

full scientific name: Anabaena variabilis

genus: Anabaena

order: Lactobacillales

phylum: Cyanobacteria

species: Anabaena variabilis

strain designation: Utrecht P40

description: Trichormus variabilis SAG 1403-4b 16S ribosomal RNA gene, partial sequence 16S-23S ribosomal RNA intergenic spacer, complete sequence and 23S ribosomal RNA gene, partial sequence.

description: Trichormus variabilis SAG 1403-4b strain ATCC 29211 16S ribosomal RNA gene, partial sequence 16S-23S ribosomal RNA intergenic spacer, complete sequence and 23S ribosomal RNA gene, partial sequence.

description: Anabaena variabilis SAG 1403-4b strain ATCC 29211 16S ribosomal RNA gene, partial sequence.

description: ASM399193v1 assembly for Trichormus variabilis SAG 1403-4b


description: domain/bacteria

family: Synechococcaceae

full scientific name: Cyanobium rubescens (Chang 1980) Komárek et al. 1999

genus: Cyanobium

order: Synechococcales

species: Cyanobium rubescens

synonym: Synechococcus rubescens

class: Cyanophyceae

full scientific name: Synechococcus rubescens

genus: Synechococcus

species: Synechococcus rubescens


description: domain/bacteria

full scientific name: <I>Nostoc</I> Vaucher ex Bornet and Flahault 1886

genus: Nostoc

species: Nostoc sp.

synonym: Polycoccus

synonym: Amorphonostoc

synonym: Stratonostoc

full scientific name: Nostoc sp.

description: Nostoc sp. PCC 7120 = FACHB-418 16S ribosomal RNA gene, partial sequence

description: Nostoc sp. PCC 7120 16S ribosomal RNA gene, partial sequence.

description: Nostoc sp. 16S rRNA gene (strain NIVA-CYA 246/PCC 7120)

description: Nostoc sp. PCC 7120 16S-23S ribosomal RNA intergenic spacer, partial sequence tRNA-Ile and tRNA-Ala genes, complete sequence and 23S ribosomal RNA gene, partial sequence.

description: ASM970v1 assembly for Nostoc sp. PCC 7120 = FACHB-418

description: ASM1469673v1 assembly for Nostoc sp. PCC 7120 = FACHB-418

description: ASM399058v1 assembly for Nostoc sp. PCC 7120 = FACHB-418


class: Sphingobacteriia

description: domain/bacteria

family: Sphingobacteriaceae

full scientific name: Mucilaginibacter hankyongensis Liu et al. 2017

genus: Mucilaginibacter

order: Sphingobacteriales

species: Mucilaginibacter hankyongensis

description: Mucilaginibacter hankyongensis 16S ribosomal RNA gene, partial sequence


class: Cytophagia

description: domain/bacteria

family: Hymenobacteraceae

full scientific name: <I>Pontibacter</I> Nedashkovskaya et al. 2005

genus: Pontibacter

order: Cytophagales

species: Pontibacter sp.

synonym: Effluviibacter

full scientific name: Pontibacter sp.

strain designation: YJ 19

description: Pontibacter sp. YJ19 16S ribosomal RNA gene, partial sequence


class: Chitinophagia

description: domain/bacteria

family: Chitinophagaceae

full scientific name: Agriterribacter humi Lee and Whang 2020

genus: Agriterribacter

order: Chitinophagales

species: Agriterribacter humi

strain designation: YJ 03

description: Agriterribacter humi strain YJ03 16S ribosomal RNA gene, partial sequence


class: Betaproteobacteria

description: domain/bacteria

family: Alcaligenaceae

full scientific name: Pusillimonas caeni Jin et al. 2017

genus: Pusillimonas

order: Burkholderiales

species: Pusillimonas caeni

description: Pusillimonas caeni strain EBR-8-1 16S ribosomal RNA gene, partial sequence

description: ASM354581v1 assembly for Pusillimonas caeni KCTC 42353


description: domain/bacteria

family: Methylophilaceae

full scientific name: Methylophilus quaylei Doronina et al. 2017

genus: Methylophilus

order: Spirillales

species: Methylophilus quaylei

order: Methylococcales

strain designation: MT

description: Methylophilus quaylei strain MT 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Methylococcaceae

full scientific name: <I>Methylomonas</I> (ex Leadbetter 1974) Whittenbury and Krieg 1984

genus: Methylomonas

species: Methylomonas sp.

full scientific name: Methylomonas sp.

description: Methylomonas sp. LW13 16S ribosomal RNA gene, partial sequence

description: ASM1686525v1 assembly for Methylomonas sp. LW13

description: ASM70292v1 assembly for Methylomonas sp. LW13


description: domain/bacteria

full scientific name: Tropicimonas marinistellae (Zhang et al. 2017) Liang et al. 2022

genus: Tropicimonas

species: Tropicimonas marinistellae

synonym: Pseudoruegeria marinistellae

full scientific name: Pseudoruegeria marinistellae Zhang et al. 2017

genus: Pseudoruegeria

species: Pseudoruegeria marinistellae

description: Tropicimonas marinistellae strain SF-16 16S ribosomal RNA gene, partial sequence

description: ASM150958v1 assembly for Tropicimonas marinistellae SF-16


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas lactis von Neubeck et al. 2017

genus: Pseudomonas

order: Pseudomonadales

species: Pseudomonas lactis

description: MG775 assembly for Pseudomonas lactis DSM 29142


class: Clostridia

description: domain/bacteria

family: Lachnospiraceae

full scientific name: <I>Coprococcus</I> Holdeman and Moore 1974 (Approved Lists 1980)

genus: Coprococcus

order: Eubacteriales

species: Coprococcus sp.

full scientific name: Coprococcus sp.


description: domain/bacteria

full scientific name: Coprococcus ammoniilyticus Hitch et al. 2022

species: Coprococcus ammoniilyticus

full scientific name: Coprococcus ammoniilyticus


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Pararobbsia alpina (Weber and King 2017) Lin et al. 2020

genus: Pararobbsia

species: Pararobbsia alpina

synonym: Burkholderia alpina

description: Pararobbsia alpina strain PO-04-17-38 16S ribosomal RNA gene, partial sequence

description: LMG 28138 assembly for Pararobbsia alpina LMG 28138


class: Actinomycetes

description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces gamaensis Zhao et al. 2017

genus: Streptomyces

order: Kitasatosporales

phylum: Actinomycetota

species: Streptomyces gamaensis

class: Actinobacteria

description: Streptomyces gamaensis strain NEAU-Gz11 16S ribosomal RNA gene, partial sequence

description: ASM4265646v1 assembly for Streptomyces gamaensis CGMCC 4.7304


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium gottingense Atasayar et al. 2017

genus: Corynebacterium

species: Corynebacterium gottingense

synonym: Corynebacterium godavarianum

synonym: Corynebacterium hadale

phylum: Actinobacteria

description: ASM3040889v1 assembly for Corynebacterium gottingense DSM 108039