description: domain/bacteria

family: Caldicellulosiruptoraceae

full scientific name: Caldicellulosiruptor changbaiensis Bing et al. 2015

genus: Caldicellulosiruptor

order: Caldicellulosiruptorales

phylum: Bacillota

species: Caldicellulosiruptor changbaiensis

synonym: Caldicellulosiruptor saccharolyticus subsp. changbaiensis

family: Clostridia, not assigned to family

order: Clostridia, not assigned to order

strain designation: CBS-Z

description: Caldicellulosiruptor changbaiensis strain CBS-Z 16S ribosomal RNA gene, partial sequence

description: ASM399925v1 assembly for Caldicellulosiruptor changbaiensis CBS-Z


Matching level: species

class: Clostridia

description: domain/bacteria

domain: Bacteria

family: Fusibacteraceae

full scientific name: Fusibacter bizertensis Smii et al. 2015

genus: Fusibacter

keyword: phylum/bacillota

order: Eubacteriales

species: Fusibacter bizertensis

phylum: Firmicutes

type strain: yes

database: nuccore

description: Fusibacter bizertensis strain LTF Kr01 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Halanaerobiales, not assigned to family

full scientific name: Anoxybacter fermentans Zeng et al. 2015

genus: Anoxybacter

order: Halanaerobiales

species: Anoxybacter fermentans

description: Anoxybacter fermentans strain DY22613 16S ribosomal RNA gene, partial sequence

assembly level: complete

description: ASM399113v1 assembly for Anoxybacter fermentans DY22613


description: domain/bacteria

family: Peptoniphilaceae

full scientific name: Ezakiella peruensis Patel et al. 2015

genus: Ezakiella

order: Tissierellales

species: Ezakiella peruensis

full scientific name: Ezakiella peruensis Patel et al. 2015 emend. Patel et al. 2019

description: Ezakiella peruensis strain M6.X2 16S ribosomal RNA gene, partial sequence

assembly level: scaffold

description: PRJEB22476 assembly for Ezakiella peruensis M6.X2


class: Bacilli

description: domain/bacteria

family: Bacillaceae

full scientific name: Exiguobacterium indicum Chaturvedi and Shivaji 2006

genus: Exiguobacterium

order: Caryophanales

species: Exiguobacterium indicum

synonym: Exiguobacterium enclense

family: Bacilli, not assigned to family

full scientific name: Exiguobacterium enclense Dastager et al. 2015

order: Bacilli, not assigned to order

species: Exiguobacterium enclense

description: Exiguobacterium enclense strain NIO-1109 16S ribosomal RNA gene, partial sequence

assembly level: contig

description: IMG-taxon 2616645037 annotated assembly for Exiguobacterium indicum NIO-1109

description: ASM145689v1 assembly for Exiguobacterium indicum NIO-1109


class: Epsilonproteobacteria

description: domain/bacteria

family: Helicobacteraceae

full scientific name: Sulfurovum aggregans Mino et al. 2014

genus: Sulfurovum

keyword: phylum/pseudomonadota

order: Campylobacterales

phylum: Pseudomonadota

species: Sulfurovum aggregans

order: Epsilonproteobacteria, not assigned to order

phylum: Proteobacteria

description: Sulfurovum aggregans gene for 16S ribosomal RNA, partial sequence


class: Deltaproteobacteria

description: domain/bacteria

family: Polyangiaceae

full scientific name: Minicystis rosea Garcia et al. 2014

genus: Minicystis

order: Polyangiales

species: Minicystis rosea

order: Deltaproteobacteria, not assigned to order

description: Minicystis rosea strain SBNa008 16S ribosomal RNA gene, complete sequence

description: ASM193153v1 assembly for Minicystis rosea DSM 24000


class: Betaproteobacteria

description: domain/bacteria

family: Chitinibacteraceae

full scientific name: Iodobacter arcticus Srinivas et al. 2013

genus: Iodobacter

order: Neisseriales

species: Iodobacter arcticus

family: Chromobacteriaceae

order: Chromobacteriaceae, not assigned to order

description: Iodobacter arcticus 16S rRNA gene, type strain Asd M4-16T

description: ASM4266489v1 assembly for Iodobacter arcticus CCUG 62945


description: domain/bacteria

full scientific name: Vogesella alkaliphila Subhash et al. 2013

genus: Vogesella

species: Vogesella alkaliphila

description: Vogesella alkaliphila partial 16S rRNA gene, type strain JC141T, isolate B4

description: ASM1465247v1 assembly for Vogesella alkaliphila KCTC 32041


description: domain/bacteria

full scientific name: Paludibacterium paludis Sheu et al. 2014

genus: Paludibacterium

species: Paludibacterium paludis

description: Paludibacterium paludis partial 16S rRNA gene, type strain KBP-21T

description: ASM1880260v1 assembly for Paludibacterium paludis BCRC 80514

description: ASM1465249v1 assembly for Paludibacterium paludis KCTC 32182


class: Coriobacteriia

description: domain/bacteria

family: Atopobiaceae

full scientific name: Atopobium deltae Cools et al. 2014

genus: Atopobium

keyword: phylum/actinomycetota

order: Coriobacteriales

phylum: Actinomycetota

species: Atopobium deltae

phylum: Actinobacteria

description: Atopobium deltae strain HHRM1715 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Tractidigestivibacter scatoligenes (Li et al. 2015) Zgheib et al. 2021

genus: Tractidigestivibacter

species: Tractidigestivibacter scatoligenes

synonym: Olsenella scatoligenes

description: Tractidigestivibacter scatoligenes strain SK9K4 16S ribosomal RNA gene, partial sequence

description: Tractidigestivibacter scatoligenes JCM 19907 gene for 16S rRNA, partial sequence.

description: ASM149463v1 assembly for Tractidigestivibacter scatoligenes SK9K4


class: Bacteroidia

description: domain/bacteria

family: Prolixibacteraceae

full scientific name: Mariniphaga anaerophila Iino et al. 2014

genus: Mariniphaga

keyword: phylum/bacteroidota

order: Bacteroidales

phylum: Bacteroidota

species: Mariniphaga anaerophila

phylum: Bacteroidetes

description: Mariniphaga anaerophila gene for 16S ribosomal RNA, partial sequence

description: IMG-taxon 2695420943 annotated assembly for Mariniphaga anaerophila DSM 26910


class: Thermotogae

description: domain/bacteria

family: Petrotogaceae

full scientific name: Defluviitoga tunisiensis Ben Hania et al. 2012

genus: Defluviitoga

keyword: phylum/thermotogota

order: Petrotogales

phylum: Thermotogota

species: Defluviitoga tunisiensis

order: Thermotogales

phylum: Thermotogae

type strain: no

description: DTL3 assembly for Defluviitoga tunisiensis


description: domain/bacteria

full scientific name: Tangfeifania diversioriginum Liu et al. 2014

genus: Tangfeifania

species: Tangfeifania diversioriginum

description: Tangfeifania diversioriginum strain G22 16S ribosomal RNA gene, partial sequence

description: IMG-taxon 2700988694 annotated assembly for Tangfeifania diversioriginum DSM 27063


class: Alphaproteobacteria

description: domain/bacteria

family: Roseiarcaceae

full scientific name: Roseiarcus fermentans Kulichevskaya et al. 2014

genus: Roseiarcus

order: Hyphomicrobiales

species: Roseiarcus fermentans

order: Rhizobiales

description: Roseiarcus fermentans strain Pf56 16S ribosomal RNA gene, partial sequence

description: ASM331513v1 assembly for Roseiarcus fermentans DSM 24875


description: domain/bacteria

family: Symbiobacteriaceae

full scientific name: Symbiobacterium ostreiconchae Shiratori-Takano et al. 2014

genus: Symbiobacterium

order: Eubacteriales

species: Symbiobacterium ostreiconchae

order: Lactobacillales

description: Symbiobacterium ostreiconchae gene for 16S rRNA, partial sequence


description: domain/bacteria

full scientific name: Symbiobacterium turbinis Shiratori-Takano et al. 2014

species: Symbiobacterium turbinis

description: Symbiobacterium turbinis gene for 16S rRNA, partial sequence


description: domain/bacteria

full scientific name: Symbiobacterium terraclitae Shiratori-Takano et al. 2014

species: Symbiobacterium terraclitae

description: Symbiobacterium terraclitae gene for 16S rRNA, partial sequence

description: ASM1787431v1 assembly for Symbiobacterium terraclitae DSM 27138


description: domain/bacteria

full scientific name: Anaerococcus provencensis corrig. Pagnier et al. 2017

genus: Anaerococcus

order: Tissierellales

species: Anaerococcus provencensis

synonym: Anaerococcus provenciensis

full scientific name: Anaerococcus provencensis Pagnier et al. 2017

order: Clostridiales

description: Anaerococcus provencensis strain 9402080 16S ribosomal RNA gene, partial sequence

description: ASM31236v2 assembly for Anaerococcus provencensis 9402080


description: domain/bacteria

full scientific name: Peptoniphilus stercorisuis Johnson et al. 2014

genus: Peptoniphilus

species: Peptoniphilus stercorisuis

description: Peptoniphilus stercorisuis strain DSM 27563 16S ribosomal RNA gene, partial sequence

description: ASM1787439v1 assembly for Peptoniphilus stercorisuis DSM 27563


description: domain/bacteria

family: Vulgatibacteraceae

full scientific name: Vulgatibacter incomptus Yamamoto et al. 2014

genus: Vulgatibacter

order: Myxococcales

species: Vulgatibacter incomptus

description: Vulgatibacter incomptus gene for 16S ribosomal RNA, partial sequence

description: ASM126317v1 assembly for Vulgatibacter incomptus DSM 27710


description: domain/bacteria

full scientific name: Labilithrix luteola Yamamoto et al. 2014

genus: Labilithrix

species: Labilithrix luteola

family: Labilitrichaceae

description: Labilithrix luteola gene for 16S ribosomal RNA, partial sequence

description: ASM126320v1 assembly for Labilithrix luteola DSM 27648

description: Labilithrix luteola strain DSM 27648


culture collection no.: DSM 24538, UNIQEM U887

class: Chitinivibrionia

description: domain/bacteria

family: Chitinivibrionaceae

full scientific name: Chitinivibrio alkaliphilus Sorokin et al. 2014

genus: Chitinivibrio

keyword: phylum/fibrobacterota

order: Chitinivibrionales

phylum: Fibrobacterota

species: Chitinivibrio alkaliphilus

order: Chitinivibrionaceae, not assigned to order

phylum: Fibrobacteres

description: Chitinivibrio alkaliphilus ACht1 16S ribosomal RNA gene, partial sequence

description: Acht1_1 assembly for Chitinivibrio alkaliphilus ACht1


culture collection no.: DSM 26620, UNIQEM U895

description: domain/bacteria

description: Haloalkaliphilic bacterium ACht7 16S ribosomal RNA gene, partial sequence


class: Gammaproteobacteria

description: domain/bacteria

family: Arenicellaceae

full scientific name: Arenicella chitinivorans Nedashkovskaya et al. 2013

genus: Arenicella

order: Arenicellales

species: Arenicella chitinivorans

description: Arenicella chitinivorans strain KMM 6208 16S ribosomal RNA gene, partial sequence

description: Arenicella chitinivorans strain KCTC 12711 16S ribosomal RNA gene, partial sequence.

description: ASM1465151v1 assembly for Arenicella chitinivorans KCTC 12711


description: domain/bacteria

family: Thorselliaceae

full scientific name: Thorsellia kenyensis Kämpfer et al. 2015

genus: Thorsellia

order: Gammaproteobacteria, not assigned to order

species: Thorsellia kenyensis

order: Enterobacteriales, not validated

description: Thorsellia kenyensis strain T2.1 16S ribosomal RNA gene, partial sequence

description: Thorsellia kenyensis strain CCM 8545 16S ribosomal RNA gene, partial sequence.

description: ASM4243244v1 assembly for Thorsellia kenyensis CCM 8545


description: domain/bacteria

full scientific name: Thorsellia kandunguensis Kämpfer et al. 2015

species: Thorsellia kandunguensis

description: Thorsellia kandunguensis strain W5.1.1 16S ribosomal RNA gene, partial sequence


Matching level: strain

class: Halobacteria

description: domain/archaea

domain: Archaea

family: Natrialbaceae

full scientific name: Natrialba hulunbeirensis Xu et al. 2001

genus: Natrialba

keyword: phylum/methanobacteriota

order: Halobacteriales

phylum: Methanobacteriota

species: Natrialba hulunbeirensis

phylum: Euryarchaeota

description: Natrialba hulunbeirensis AS1.1986 16S ribosomal RNA gene, partial sequence

description: Natrialba hulunbeirensis gene for 16S rRNA, complete sequence, strain: JCM 10989.

description: ASM33757v1 assembly for Natrialba hulunbeirensis JCM 10989


description: domain/archaea

full scientific name: Natrialba chahannaoensis Xu et al. 2001

species: Natrialba chahannaoensis

description: Natronobacterium chahannaoensis mRNA for 16S ribosomal RNA

description: Natrialba chahannaoensis gene for 16S rRNA, complete sequence, strain: JCM 10990.

description: ASM33713v1 assembly for Natrialba chahannaoensis JCM 10990


description: domain/archaea

full scientific name: <I>Natrialba</I> Kamekura and Dyall-Smith 1996

species: Natrialba sp.

full scientific name: Natrialba sp.

description: Natrialba sp. SSL1 SSL1 ATCC 43988 DNA for 16S rRNA

description: ASM186135v1 assembly for Natrialba sp. SSL1


description: domain/bacteria

family: Rhodanobacteraceae

full scientific name: Dyella kyungheensis Son et al. 2013

genus: Dyella

order: Lysobacterales

species: Dyella kyungheensis

order: Xanthomonadales

description: Dyella kyungheensis strain THG-B117 16S ribosomal RNA gene, partial sequence

description: ASM1690500v1 assembly for Dyella kyungheensis THG-B117


description: domain/bacteria

full scientific name: Fulvimonas yonginensis Ahn et al. 2014

genus: Fulvimonas

species: Fulvimonas yonginensis

description: Fulvimonas yonginensis strain 5GHs31-2 16S ribosomal RNA gene, partial sequence

description: ASM3713705v1 assembly for Fulvimonas yonginensis KACC 16952


description: domain/bacteria

full scientific name: Rhodanobacter caeni Woo et al. 2012

genus: Rhodanobacter

species: Rhodanobacter caeni

description: Rhodanobacter caeni strain MJ01 16S ribosomal RNA gene, partial sequence

description: ASM3952357v1 assembly for Rhodanobacter caeni JCM 16242


description: domain/bacteria

family: Sulfuricellaceae

full scientific name: Sulfuriferula multivorans Watanabe et al. 2015

genus: Sulfuriferula

order: Spirillales

species: Sulfuriferula multivorans

order: Hydrogenophilales

strain designation: TTN

description: Sulfuriferula multivorans gene for 16S ribosomal RNA, partial sequence

description: ASM385112v1 assembly for Sulfuriferula multivorans TTN


description: domain/bacteria

family: Bacillaceae

full scientific name: Alkalilactibacillus ikkensis Schmidt et al. 2016

genus: Alkalilactibacillus

order: Caryophanales

species: Alkalilactibacillus ikkensis

synonym: Alkalilactibacillus ikkense

description: Alkalilactibacillus ikkensis strain GCM68 16S ribosomal RNA gene, partial sequence


class: Not assigned to order

family: Not assigned to family

full scientific name: Barnettozyma vustinii Yurkov, Schäfer & Begerow 2010

genus: Barnettozyma

order: Not assigned to order

phylum: Not assigned to order

species: Barnettozyma vustinii


description: domain/bacteria

family: Alcaligenaceae

full scientific name: Achromobacter xylosoxidans (ex Yabuuchi and Ohyama 1971) Yabuuchi and Yano 1981

genus: Achromobacter

order: Burkholderiales

species: Achromobacter xylosoxidans

synonym: Achromobacter xylosoxidans

synonym: Alcaligenes xylosoxidans

synonym: Alcaligenes denitrificans subsp. xylosoxydans

synonym: Alcaligenes xylosoxydans

full scientific name: Achromobacter xylosoxidans subsp. xylosoxidans (ex Yabuuchi and Ohyama 1971) Yabuuchi et al. 1998

description: Achromobacter xylosoxidans strain JP-22 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Moraxellaceae

full scientific name: Acinetobacter lwoffii (Audureau 1940) Brisou and Prévot 1954 (Approved Lists 1980)

genus: Acinetobacter

order: Pseudomonadales

species: Acinetobacter lwoffii

synonym: Moraxella lwoffi

synonym: Acinetobacter mesopotamicus

full scientific name: Acinetobacter lwoffii (Audureau 1940) Brisou and Prévot 1954 emend. Nemec et al. 2019

description: Acinetobacter lwoffii strain 2A 16S ribosomal RNA gene, partial sequence

description: ASM1904852v1 assembly for Acinetobacter lwoffii FDAARGOS 1394


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Azomonas macrocytogenes (Jensen 1955) New and Tchan 1982

genus: Azomonas

species: Azomonas macrocytogenes

synonym: Azomonotrichon macrocytogenes

synonym: Azotobacter macrocytogenes


description: domain/bacteria

full scientific name: Bacillus cereus Frankland and Frankland 1887 (Approved Lists 1980)

genus: Bacillus

species: Bacillus cereus

order: Bacillales


description: domain/bacteria

full scientific name: Bacillus cereus Frankland and Frankland 1887


description: domain/bacteria

full scientific name: Bacillus licheniformis (Weigmann 1898) Chester 1901 (Approved Lists 1980)

species: Bacillus licheniformis

synonym: Clostridium licheniforme

description: Bacillus licheniformis strain D2411 16S ribosomal RNA gene, partial sequence

description: ASM2462309v1 assembly for Bacillus paralicheniformis DSM 28591

description: ASM2953703v2 assembly for Bacillus paralicheniformis DSM 28591


description: domain/bacteria

full scientific name: Bacillus licheniformis (Weigmann 1898) Chester 1901


description: domain/bacteria

full scientific name: Bacillus pumilus Meyer and Gottheil 1901 (Approved Lists 1980)

species: Bacillus pumilus


description: domain/bacteria

full scientific name: Bacillus pumilus Meyer and Gottheil 1901


description: domain/bacteria

full scientific name: Peribacillus simplex (Priest et al. 1989 ex Meyer and Gottheil 1901) Patel and Gupta 2020

genus: Peribacillus

species: Peribacillus simplex

synonym: Bacillus simplex

full scientific name: Peribacillus simplex (Priest et al. 1989) Patel and Gupta 2020


description: domain/bacteria

full scientific name: Alkalihalophilus lindianensis (Dou et al. 2016) Joshi et al. 2022

genus: Alkalihalophilus

species: Alkalihalophilus lindianensis

synonym: Bacillus lindianensis

synonym: Alkalihalobacillus lindianensis

description: Alkalihalophilus lindianensis strain 12-3 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Bacillus dielmonensis corrig. Lo et al. 2021

species: Bacillus dielmonensis

synonym: Bacillus dielmoensis

synonym: Neobacillus dielmonensis

full scientific name: Neobacillus dielmonensis (Lo et al. 2021) Kämpfer et al. 2022

genus: Neobacillus

species: Neobacillus dielmonensis

description: Bacillus sp. FF4 partial 16S rRNA gene, strain FF4

description: FF4 assembly for Neobacillus dielmonensis FF4


description: domain/bacteria

family: Cytobacillaceae

full scientific name: Neobacillus jeddahensis (Bittar et al. 2017) Patel and Gupta 2020

species: Neobacillus jeddahensis

synonym: Bacillus jeddahensis

strain designation: JCE

description: Bacillus sp. JCE partial 16S rRNA gene, isolate JCE

description: JCE assembly for Neobacillus jeddahensis JCE


description: domain/bacteria

description: Bacillus sp. NRDAF21 16S ribosomal RNA gene, partial sequence

description: ASM2462314v1 assembly for Bacillus cereus DSM 28590


description: domain/bacteria

full scientific name: <I>Bacillus</I> Cohn 1872 (Approved Lists 1980)

species: Bacillus sp.

synonym: Quasibacillus

synonym: Weizmannia

synonym: Maribacillus

synonym: Niallia

full scientific name: Bacillus sp.


description: domain/bacteria

full scientific name: Bacillus subtilis (Ehrenberg 1835) Cohn 1872 (Approved Lists 1980)

species: Bacillus subtilis

synonym: Vibrio subtilis

description: Bacillus sp. Amp-T18 16S ribosomal RNA gene, partial sequence

description: ASM2462308v1 assembly for Bacillus subtilis DSM 28592


description: domain/bacteria

full scientific name: Bacillus subtilis (Ehrenberg 1835) Cohn 1872


description: domain/bacteria

family: Tannerellaceae

genus: Parabacteroides

order: Bacteroidales

species: Parabacteroides distasonis

synonym: Bacteroides distasonis

full scientific name: Parabacteroides distasonis (Eggerth and Gagnon 1933) Sakamoto and Benno 2006 emend. Hahnke et al. 2016

description: Parabacteroides distasonis strain SAB-131-CoC-3 16S ribosomal RNA gene, partial sequence

description: ASM2462210v1 assembly for Parabacteroides distasonis DSM 29491


description: domain/bacteria

family: Bacteroidaceae

full scientific name: Phocaeicola vulgatus (Eggerth and Gagnon 1933) García-López et al. 2020

genus: Phocaeicola

species: Phocaeicola vulgatus

synonym: Bacteroides vulgatus

description: Phocaeicola vulgatus strain 39a-cc-B-5824-ARE 16S ribosomal RNA gene, partial sequence

description: ASM2462203v1 assembly for Phocaeicola vulgatus DSM 28735

assembly level: chromosome

description: ASM1676693v1 assembly for Phocaeicola vulgatus FDAARGOS_1099


class: Actinomycetes

description: domain/bacteria

family: Brevibacteriaceae

full scientific name: Brevibacterium casei Collins et al. 1983

genus: Brevibacterium

order: Micrococcales

species: Brevibacterium casei

class: Actinobacteria

order: Actinomycetales

description: Brevibacterium casei strain JV801 16S ribosomal RNA gene, partial sequence

description: ASM1672624v1 assembly for Brevibacterium casei FDAARGOS_1100


description: domain/bacteria

family: Enterobacteriaceae

genus: Buttiauxella

order: Enterobacterales

species: Buttiauxella agrestis

full scientific name: Buttiauxella agrestis Ferragut et al. 1982 emend. Müller et al. 1996


description: domain/bacteria

family: Campylobacteraceae

full scientific name: Campylobacter coli (Doyle 1948) Véron and Chatelain 1973 (Approved Lists 1980)

genus: Campylobacter

order: Campylobacterales

species: Campylobacter coli

synonym: Campylobacter hyoilei

synonym: Vibrio coli


description: domain/bacteria

full scientific name: Campylobacter coli (Doyle 1948) Véron and Chatelain 1973


description: domain/bacteria

description: Campylobacter coli strain FDAARGOS_1464

description: ASM2014972v1 assembly for Campylobacter jejuni FDAARGOS_1464


description: domain/bacteria

full scientific name: Campylobacter coli (Doyle 1948) Veron and Chatelain 1973

description: ASM1973475v1 assembly for Campylobacter coli 13


description: domain/bacteria

strain designation: CNET063, CS46T


description: domain/bacteria

full scientific name: Campylobacter jejuni (Jones et al. 1931) Véron and Chatelain 1973 (Approved Lists 1980)

species: Campylobacter jejuni

synonym: Vibrio jejuni

description: ASM1790v1 assembly for Campylobacter jejuni subsp. jejuni 81116 81116; NCTC 11828

description: ASM2073614v1 assembly for Campylobacter jejuni FDAARGOS_1546

description: Campylobacter jejuni strain FDAARGOS_1546


description: domain/bacteria

strain designation: CNET082, OK1A


description: domain/bacteria

description: ASM1993098v1 assembly for Campylobacter coli FDAARGOS_1465

description: Campylobacter coli strain FDAARGOS_1465

description: Campylobacter coli strain FDAARGOS_1465

description: Campylobacter coli strain FDAARGOS_1465


description: domain/bacteria

strain designation: CNET069, CPR1


description: domain/bacteria

description: ASM1993086v1 assembly for Campylobacter coli FDAARGOS_1466

description: Campylobacter coli strain FDAARGOS_1466

description: Campylobacter coli strain FDAARGOS_1466

description: Campylobacter coli strain FDAARGOS_1466


description: domain/bacteria

description: ASM3951754v1 assembly for Campylobacter coli CCS 17341-20


description: domain/bacteria


description: domain/bacteria

description: ASM3951836v1 assembly for Campylobacter coli CCS 249 07 / 13784


description: domain/bacteria

family: Promicromonosporaceae

full scientific name: Cellulosimicrobium cellulans (Metcalfe and Brown 1957) Schumann et al. 2001

genus: Cellulosimicrobium

species: Cellulosimicrobium cellulans

synonym: Brevibacterium lyticum

synonym: Nocardia cellulans

synonym: Cellulomonas cellulans

synonym: Cellulomonas cartalyticum

synonym: Brevibacterium fermentans

synonym: Oerskovia xanthineolytica

synonym: Cellulomonas cartae

description: Cellulosimicrobium sp. BL204R1 16S ribosomal RNA gene, partial sequence

description: ASM2462294v1 assembly for Cellulosimicrobium cellulans DSM 29131


description: domain/bacteria

full scientific name: Citrobacter amalonaticus (Young et al. 1971) Brenner and Farmer 1982

genus: Citrobacter

species: Citrobacter amalonaticus

synonym: Levinea amalonatica

strain designation: G


description: domain/bacteria

full scientific name: Citrobacter freundii (Braak 1928) Werkman and Gillen 1932 (Approved Lists 1980)

species: Citrobacter freundii

synonym: Bacterium freundii

synonym: Bethesda ballerupensis


class: Fusobacteriia

description: domain/bacteria

family: Fusobacteriaceae

full scientific name: Fusobacterium plautii corrig. Séguin 1928 (Approved Lists 1980)

genus: Fusobacterium

keyword: phylum/fusobacteriota

order: Fusobacteriales

phylum: Fusobacteriota

species: Fusobacterium plautii

synonym: Fusobacterium plauti

synonym: Clostridium orbiscindens

synonym: Eubacterium plautii

synonym: Flavonifractor plautii

family: Oscillospiraceae

full scientific name: Flavonifractor plautii (Séguin 1928) Carlier et al. 2010

genus: Flavonifractor

order: Clostridia, not assigned to order

species: Flavonifractor plautii

description: Flavonifractor plautii strain DSM 29136 16S ribosomal RNA gene, partial sequence

description: ASM2462261v1 assembly for Flavonifractor plautii DSM 29136


description: domain/bacteria

description: Flavonifractor plautii strain mOs-SRB-10A-2011 16S ribosomal RNA gene, partial sequence

description: ASM2462252v1 assembly for Flavonifractor plautii DSM 29137


description: domain/bacteria

description: Flavonifractor plautii strain YL31 16S ribosomal RNA gene, partial sequence

description: ASM168862v2 assembly for Flavonifractor plautii YL31

description: ASM1669680v1 assembly for Flavonifractor plautii YL31

description: ASM222164v1 assembly for Flavonifractor plautii YL31

description: ASM2327788v1 assembly for Flavonifractor plautii YL31


description: domain/bacteria

family: Eubacteriaceae

full scientific name: <I>Eubacterium</I> Prévot 1938 (Approved Lists 1980)

genus: Eubacterium

order: Eubacteriales

species: Eubacterium sp.

full scientific name: Eubacterium sp.

order: Clostridiales

description: Peptostreptococcaceae bacterium AS15 16S ribosomal RNA gene, partial sequence


class: Flavobacteriia

description: domain/bacteria

family: Flavobacteriaceae

full scientific name: <I>Flavobacterium</I> Bergey et al. 1923 (Approved Lists 1980)

genus: Flavobacterium

order: Flavobacteriales

species: Flavobacterium sp.

full scientific name: Flavobacterium sp.


description: domain/bacteria

description: Flavobacterium sp. N2 16S ribosomal RNA gene, partial sequence


class: Clostridia

description: domain/bacteria

family: Peptostreptococcaceae

genus: Paraclostridium

order: Peptostreptococcales

species: Paraclostridium bifermentans

synonym: Bacillus bifermentans

synonym: Clostridium bifermentans

family: Clostridiaceae

full scientific name: Paraclostridium bifermentans (Weinberg and Séguin 1918) Sasi Jyothsna et al. 2016 emend. Kutsuna et al. 2018

description: Clostridium sp. G7K1R3-PYG-90 16S ribosomal RNA gene, partial sequence

description: ASM2462208v1 assembly for Paraclostridium bifermentans DSM 29423


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Enterocloster clostridioformis (Burri and Ankersmit 1906) Haas and Blanchard 2020

genus: Enterocloster

species: Enterocloster clostridioformis

synonym: Clostridium clostridioforme

synonym: Bacteroides clostridiiformis

synonym: Bacterium clostridiiforme

synonym: Clostridium clostridiiforme

description: Enterocloster clostridioformis strain YL32 16S ribosomal RNA gene, partial sequence

description: ASM222154v1 assembly for Enterocloster clostridioformis YL32

description: ASM1020618v1 assembly for Enterocloster clostridioformis YL32

description: ASM1669678v1 assembly for Enterocloster clostridioformis YL32


description: domain/bacteria

full scientific name: Blautia pseudococcoides Maturana and Cárdenas 2022

genus: Blautia

species: Blautia pseudococcoides

full scientific name: Blautia pseudococcoides

description: Blautia sp. A-C6-0 16S ribosomal RNA gene, partial sequence

description: ASM2462300v1 assembly for Blautia pseudococcoides DSM 28737


description: domain/bacteria

full scientific name: Blautia producta (Prévot 1941) Liu et al. 2008

species: Blautia producta

synonym: Peptostreptococcus productus

synonym: Ruminococcus productus

synonym: Clostridium coccoides

synonym: Blautia coccoides

synonym: Streptococcus productus

full scientific name: Blautia coccoides (Kaneuchi et al. 1976) Liu et al. 2008

species: Blautia coccoides

description: Blautia coccoides strain DSM 29138 16S ribosomal RNA gene, partial sequence

description: ASM2462304v1 assembly for Blautia producta DSM 29138


description: domain/bacteria

description: Blautia pseudococcoides strain YL58 16S ribosomal RNA gene, partial sequence

description: ASM168912v2 assembly for Blautia pseudococcoides YL58

description: ASM222155v2 assembly for Blautia pseudococcoides YL58

description: ASM1669674v1 assembly for Blautia pseudococcoides YL58


description: domain/bacteria

full scientific name: Clostridium cochlearium (Douglas et al. 1919) Bergey et al. 1923 (Approved Lists 1980)

genus: Clostridium

species: Clostridium cochlearium

synonym: Clostridium lentoputrescens

synonym: Bacillus cochlearius

description: Clostridium sp. G7K4R3-PYG-96 16S ribosomal RNA gene, partial sequence

description: ASM2462286v1 assembly for Clostridium cochlearium DSM 29358


description: domain/bacteria

full scientific name: Clostridium innocuum Smith and King 1962 (Approved Lists 1980)

species: Clostridium innocuum

description: [Clostridium] innocuum strain A-C3-1 16S ribosomal RNA gene, partial sequence

description: ASM2462296v1 assembly for [Clostridium] innocuum DSM 29132


description: domain/bacteria

full scientific name: Clostridium innocuum Smith and King 1962

description: [Clostridium] innocuum strain I46 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Metaclostridioides mangenotii (Prévot and Zimmès-Chaverou 1947) Bello et al. 2024

genus: Metaclostridioides

species: Metaclostridioides mangenotii

synonym: Inflabilis mangenoti

synonym: Clostridium mangenotii

synonym: Clostridioides mangenotii

full scientific name: Clostridioides mangenotii (Prévot and Zimmès-Chaverou 1947) Lawson et al. 2016

genus: Clostridioides

species: Clostridioides mangenotii

description: Metaclostridioides mangenotii strain G10-CCK1R4-PYG-100 16S ribosomal RNA gene, partial sequence

description: ASM2462292v1 assembly for Metaclostridioides mangenotii DSM 29133


description: domain/bacteria

full scientific name: Clostridium perfringens (Veillon and Zuber 1898) Hauduroy et al. 1937 (Approved Lists 1980)

species: Clostridium perfringens

synonym: Clostridioides perfringens

synonym: Bacillus perfringens

description: Clostridium perfringens strain WCA-an-CC-1-3a 16S ribosomal RNA gene, partial sequence

description: ASM2462284v1 assembly for Clostridium perfringens DSM 29991

description: ASM1602667v1 assembly for Clostridium perfringens FDAARGOS_931


description: domain/bacteria

full scientific name: Clostridium perfringens (Veillon and Zuber 1898) Hauduroy et al. 1937

description: 44310_G02 assembly for Clostridium perfringens NCTC13170


description: domain/bacteria

full scientific name: Clostridium ramosum (Veillon and Zuber 1898) Holdeman et al. 1971 (Approved Lists 1980)

species: Clostridium ramosum

synonym: Thomasclavelia ramosa

synonym: Erysipelatoclostridium ramosum

synonym: Bacillus ramosus

class: Erysipelotrichia

family: Coprobacillaceae

full scientific name: Thomasclavelia  ramosa

genus: Thomasclavelia

order: Erysipelotrichales

species: Thomasclavelia ramosa

description: Thomasclavelia ramosa strain DSM 29355 16S ribosomal RNA gene, partial sequence

description: ASM2462278v1 assembly for Thomasclavelia ramosa DSM 29355

description: ASM1672878v1 assembly for Thomasclavelia ramosa FDAARGOS_1105


description: domain/bacteria

description: Thomasclavelia ramosa strain SRB509-5-F-B 16S ribosomal RNA gene, partial sequence

description: ASM2462280v1 assembly for Thomasclavelia ramosa DSM 29357

description: ASM1676685v1 assembly for Thomasclavelia ramosa FDAARGOS_1106


description: domain/bacteria

full scientific name: Paeniclostridium sordellii (Hall and Scott 1927) Sasi Jyothsna et al. 2016

genus: Paeniclostridium

species: Paeniclostridium sordellii

synonym: Bacillus sordellii

synonym: Clostridium sordellii

synonym: Paraclostridium sordellii

description: Paraclostridium sordellii strain MJJ0609-3-1 16S ribosomal RNA gene, partial sequence

description: ASM2462213v1 assembly for Paraclostridium sordellii DSM 29974


description: domain/bacteria

full scientific name: Clostridium tepidum Dobritsa et al. 2017

species: Clostridium tepidum

strain designation: PE

description: Clostridium sporogenes subsp. tusciae partial 16S rRNA gene, type strain PE

description: ASM200826v1 assembly for Clostridium tepidum PE


description: domain/bacteria

full scientific name: Clostridium mucosae Afrizal et al. 2025

species: Clostridium mucosae

full scientific name: Clostridium mucosae

description: Clostridium mucosae strain PG-426-IM-1 16S ribosomal RNA gene, partial sequence

description: ASM2462276v1 assembly for Clostridium sp. DSM 100503


description: domain/bacteria

description: Clostridium sp. B-CC-163-3B 16S ribosomal RNA gene, partial sequence

description: ASM2462282v1 assembly for Clostridium tepidum DSM 29420


description: domain/bacteria

full scientific name: Clostridium sporogenes (Metchnikoff 1908) Bergey et al. 1923 (Approved Lists 1980)

species: Clostridium sporogenes

synonym: Bacillus sporogenes

description: Clostridium sporogenes strain DSM 29422 16S ribosomal RNA gene, partial sequence

description: ASM2462288v1 assembly for Clostridium sporogenes DSM 29422


description: domain/bacteria

full scientific name: Clostridium symbiosum (Stevens 1956) Kaneuchi et al. 1976 (Approved Lists 1980)

species: Clostridium symbiosum

synonym: Bacteroides symbiosus

description: [Clostridium] symbiosum strain SRB539-5-G-R 16S ribosomal RNA gene, partial sequence

description: ASM2462270v1 assembly for [Clostridium] symbiosum DSM 29356


Matching level: subspecies

description: domain/bacteria

family: Thermoanaerobacteraceae

full scientific name: Thermoanaerobacter ethanolicus subsp. indiensis Bing 2026

genus: Thermoanaerobacter

order: Thermoanaerobacterales

synonym: Thermoanaerobacter indiensis

full scientific name: Thermoanaerobacter thermohydrosulfuricus (Klaushofer and Parkkinen 1965) Lee et al. 1993

description: Thermoanaerobacter sp. BSB-33 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Corynebacteriaceae

full scientific name: Corynebacterium glutamicum (Kinoshita et al. 1958) Abe et al. 1967 (Approved Lists 1980)

genus: Corynebacterium

order: Mycobacteriales

species: Corynebacterium glutamicum

synonym: Corynebacterium lilium

synonym: Brevibacterium divaricatum

synonym: Micrococcus glutamicus

full scientific name: Corynebacterium glutamicum (Kinoshita et al. 1958) Abe et al. 1967 emend. Nouioui et al. 2018

description: ASM44501v1 assembly for Corynebacterium glutamicum MB001


description: domain/bacteria


description: domain/bacteria

full scientific name: Corynebacterium uropygiale Braun et al. 2016

species: Corynebacterium uropygiale

description: Corynebacterium uropygiale strain Iso10 16S ribosomal RNA gene, partial sequence

description: ASM2156831v1 assembly for Corynebacterium uropygiale JCM 32435


class: Desulfovibrionia

description: domain/bacteria

family: Desulfovibrionaceae

full scientific name: <I>Desulfovibrio</I> Kluyver and van Niel 1936 (Approved Lists 1980)

genus: Desulfovibrio

keyword: phylum/thermodesulfobacteriota

order: Desulfovibrionales

phylum: Thermodesulfobacteriota

species: Desulfovibrio sp.

synonym: Desulfomonas

synonym: Aminidesulfovibrio

synonym: Psychrodesulfovibrio

synonym: Frigididesulfovibrio

synonym: Alteridesulfovibrio

full scientific name: Desulfovibrio sp.


description: domain/bacteria

full scientific name: Enterobacter hormaechei subsp. hoffmannii Sutton et al. 2018

genus: Enterobacter

synonym: Enterobacter hoffmannii

order: Enterobacteriales, not validated

description: Enterobacter hormaechei subsp. hoffmannii strain DSM 14563 16S ribosomal RNA gene, partial sequence.

description: ASM172974v1 assembly for Enterobacter hormaechei subsp. hoffmannii DSM 14563


description: domain/bacteria

full scientific name: Enterobacter roggenkampii Sutton et al. 2018

species: Enterobacter roggenkampii

description: Enterobacter roggenkampii strain DSM 16690 16S ribosomal RNA gene, partial sequence.

description: ASM172980v1 assembly for Enterobacter roggenkampii DSM 16690

description: ASM2439099v1 assembly for Enterobacter roggenkampii DSM 16690

description: ASM1904702v1 assembly for Enterobacter roggenkampii FDAARGOS 1430


description: domain/bacteria

full scientific name: Kluyvera intermedia (Izard et al. 1980) Pavan et al. 2005

genus: Kluyvera

species: Kluyvera intermedia

synonym: Enterobacter intermedius

synonym: Enterobacter intermedium

synonym: Kluyvera cochleae


class: Bacilli

description: domain/bacteria

family: Enterococcaceae

full scientific name: Enterococcus faecalis (Andrewes and Horder 1906) Schleifer and Kilpper-Bälz 1984

genus: Enterococcus

order: Lactobacillales

phylum: Bacillota

species: Enterococcus faecalis

synonym: Streptococcus faecalis

description: Enterococcus sp. BL6J-x-F-MMA-1-1 16S ribosomal RNA gene, partial sequence

description: ASM2462272v1 assembly for Enterococcus faecalis DSM 29488


description: domain/bacteria

phylum: Firmicutes

description: Enterococcus faecalis strain KB1 16S ribosomal RNA gene, partial sequence

description: ASM168905v2 assembly for Enterococcus faecalis KB1

description: ASM222162v2 assembly for Enterococcus faecalis KB1

description: ASM1669682v1 assembly for Enterococcus faecalis KB1


description: domain/bacteria

full scientific name: Enterococcus gallinarum (Bridge and Sneath 1982) Collins et al. 1984

species: Enterococcus gallinarum

synonym: Streptococcus gallinarum

description: Enterococcus sp. JM20 16S ribosomal RNA gene, partial sequence

description: ASM2462268v1 assembly for Enterococcus gallinarum DSM 28564


description: domain/bacteria

description: Enterococcus sp. A-C2-0b 16S ribosomal RNA gene, partial sequence

description: ASM2462265v1 assembly for Enterococcus gallinarum DSM 28565


description: domain/bacteria

description: Enterococcus gallinarum strain DSM 100110 16S ribosomal RNA gene, partial sequence

description: ASM2462262v1 assembly for Enterococcus gallinarum DSM 100110


description: domain/bacteria

full scientific name: Enterococcus hirae Farrow and Collins 1985

species: Enterococcus hirae

strain designation: SB

description: Enterococcus sp. SB 16S ribosomal RNA gene, partial sequence

description: ASM2462260v1 assembly for Enterococcus hirae DSM 28619

description: ASM1672726v1 assembly for Enterococcus hirae FDAARGOS_1125


description: domain/bacteria

family: Pectobacteriaceae

full scientific name: Pectobacterium atrosepticum (van Hall 1902) Gardan et al. 2003

genus: Pectobacterium

phylum: Pseudomonadota

species: Pectobacterium atrosepticum

synonym: Pectobacterium carotovorum subsp. atrosepticum

synonym: Bacillus atrosepticus

synonym: Erwinia carotovora subsp. atroseptica


description: domain/bacteria

full scientific name: Pectobacterium carotovorum (Jones 1901) Waldee 1945 (Approved Lists 1980)

species: Pectobacterium carotovorum

synonym: Bacillus carotovorus

synonym: Erwinia carotovora

full scientific name: Pectobacterium carotovorum (Jones 1901) Waldee 1945 emend. Gardan et al. 2003

phylum: Proteobacteria

description: Pectobacterium carotovorum subsp. carotovorum strain C150 note sequence type I 16S ribosomal RNA gene, complete sequence

description: Pectobacterium carotovorum subsp. carotovorum strain C150 note sequence type II 16S ribosomal RNA gene, complete sequence


description: domain/bacteria

description: Pectobacterium carotovorum subsp. carotovorum strain C267 note sequence type I 16S ribosomal RNA gene, complete sequence

description: Pectobacterium carotovorum subsp. carotovorum strain C267 note sequence type II 16S ribosomal RNA gene, complete sequence


description: domain/bacteria


description: domain/bacteria

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

genus: Escherichia

species: Escherichia coli

synonym: Bacillus coli

description: Escherichia coli partial 16S rRNA gene, strain Mt1B1

description: ASM305262v1 assembly for Escherichia coli Mt1B1

description: ASM1020613v1 assembly for Escherichia coli Mt1B1


description: domain/bacteria

family: Hafniaceae

full scientific name: Hafnia alvei Møller 1954 (Approved Lists 1980)

genus: Hafnia

species: Hafnia alvei

full scientific name: Hafnia alvei Møller 1954

description: ASM2045028v1 assembly for Hafnia paralvei FDAARGOS_1502

description: Hafnia paralvei strain FDAARGOS_1502

description: Hafnia paralvei strain FDAARGOS_1502


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Klebsiella oxytoca (Flügge 1886) Lautrop 1956 (Approved Lists 1980)

genus: Klebsiella

species: Klebsiella oxytoca

synonym: Bacillus oxytocus


description: domain/bacteria

full scientific name: Kluyvera cryocrescens Farmer et al. 1981

species: Kluyvera cryocrescens


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Ligilactobacillus murinus (Hemme et al. 1982) Zheng et al. 2020

genus: Ligilactobacillus

species: Ligilactobacillus murinus

synonym: Lactobacillus murinus

description: Ligilactobacillus murinus strain DSM 28690 16S ribosomal RNA gene, partial sequence

description: ASM2462232v1 assembly for Ligilactobacillus murinus DSM 28690


description: domain/bacteria

description: Lactobacillus sp. M-6244-3B 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Ligilactobacillus murinus strain DSM 100193 16S ribosomal RNA gene, partial sequence

description: ASM2462238v1 assembly for Ligilactobacillus murinus DSM 100193


description: domain/bacteria

description: Ligilactobacillus murinus strain DSM 100194 16S ribosomal RNA gene, partial sequence

description: ASM2462236v1 assembly for Ligilactobacillus murinus DSM 100194


description: domain/bacteria

full scientific name: Lactiplantibacillus plantarum subsp. plantarum (Orla-Jensen 1919) Zheng et al. 2020

genus: Lactiplantibacillus

synonym: Lactobacillus plantarum subsp. plantarum

strain designation: Enolab 4606, J16


description: domain/bacteria

full scientific name: Limosilactobacillus reuteri (Kandler et al. 1982) Zheng et al. 2020

genus: Limosilactobacillus

species: Limosilactobacillus reuteri

synonym: Lactobacillus reuteri

description: Limosilactobacillus reuteri strain M-6220-5A 16S ribosomal RNA gene, partial sequence

description: ASM2462228v1 assembly for Limosilactobacillus reuteri DSM 28673


description: domain/bacteria

description: Limosilactobacillus reuteri strain DSM 100191 16S ribosomal RNA gene, partial sequence

description: ASM2462231v1 assembly for Limosilactobacillus reuteri DSM 100191


description: domain/bacteria

description: Limosilactobacillus reuteri strain DSM 100192 16S ribosomal RNA gene, partial sequence

description: ASM2462230v1 assembly for Limosilactobacillus reuteri DSM 100192


description: domain/bacteria

description: Limosilactobacillus reuteri strain I49 16S ribosomal RNA gene, partial sequence

description: ASM168868v2 assembly for Limosilactobacillus reuteri I49

description: ASM1669704v1 assembly for Limosilactobacillus reuteri I49

description: ASM222165v1 assembly for Limosilactobacillus reuteri I49


description: domain/bacteria

family: Streptococcaceae

full scientific name: Lactococcus garvieae (Collins et al. 1984) Schleifer et al. 1986

genus: Lactococcus

species: Lactococcus garvieae

synonym: Enterococcus seriolicida

synonym: Lactobacillus garvieae

synonym: Streptococcus garvieae

description: Lactococcus garvieae partial 16S rRNA gene, strain M14

description: PRJEB6736_assembly_1 assembly for Lactococcus garvieae M14

description: ASM1612737v1 assembly for Lactococcus garvieae FDAARGOS_1002


family: Not assigned to family

full scientific name: unclassified bacterium

genus: unclassified

species: unclassified bacterium

strain designation: CHL6 7


strain designation: CHL6 8


class: Sphingobacteriia

description: domain/bacteria

family: Sphingobacteriaceae

full scientific name: Anseongella ginsenosidimutans Siddiqi et al. 2016

genus: Anseongella

order: Sphingobacteriales

species: Anseongella ginsenosidimutans

description: Anseongella ginsenosidimutans strain Gsoil 524 16S ribosomal RNA gene, partial sequence

description: ASM434613v1 assembly for Anseongella ginsenosidimutans DSM 21100

description: ASM803323v1 assembly for Anseongella ginsenosidimutans Gsoil 524


family: Actinobacteria, not assigned to family

genus: Actinobacteria

order: Not assigned to order

species: Actinobacteria sp.

description: Actinorectispora indica strain YIM 75722 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Promicromonosporaceae

full scientific name: Promicromonospora kermanensis Mohammadipanah et al. 2017

genus: Promicromonospora

order: Micrococcales

phylum: Actinomycetota

species: Promicromonospora kermanensis

order: Actinomycetales

description: Promicromonospora kermanensis strain UTMC 533 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Bacteroidaceae

full scientific name: Bacteroides timonensis Ramasamy et al. 2014

genus: Bacteroides

order: Bacteroidales

species: Bacteroides timonensis

full scientific name: Bacteroides timonensis

description: Bacteroides timonensis AP1 16S ribosomal RNA gene, partial sequence

description: AP1 assembly for Bacteroides timonensis


description: domain/bacteria

full scientific name: Bacteroides neonati Cassir et al. 2014

species: Bacteroides neonati

full scientific name: Bacteroides neonati Cassir et al. 2017

description: Bacteroidaceae bacterium MS4 partial 16S rRNA gene, strain MS4


description: domain/bacteria

family: Erysipelotrichaceae

full scientific name: Erysipelothrix larvae Bang et al. 2016

genus: Erysipelothrix

species: Erysipelothrix larvae

strain designation: LV 19

description: Erysipelothrix larvae strain LV19 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Streptomycetaceae

full scientific name: Streptomyces thermoautotrophicus Gadkari et al. 1991

genus: Streptomyces

order: Kitasatosporales

species: Streptomyces thermoautotrophicus

synonym: Carbonactinospora thermoautotrophica

phylum: Actinobacteria


description: domain/bacteria

description: ASM154392v1 assembly for Carbonactinospora thermoautotrophica H1


description: domain/bacteria

family: Listeriaceae

full scientific name: Listeria monocytogenes (Murray et al. 1926) Pirie 1940 (Approved Lists 1980)

genus: Listeria

order: Caryophanales

species: Listeria monocytogenes

synonym: Bacterium monocytogenes

order: Bacillales


description: domain/bacteria

family: Methylobacteriaceae

full scientific name: <I>Methylobacterium</I> Patt et al. 1976 (Approved Lists 1980)

genus: Methylobacterium

order: Hyphomicrobiales

species: Methylobacterium sp.

full scientific name: Methylobacterium sp.

order: Rhizobiales

description: ASM2217968v1 assembly for Methylobacterium trifolii DSM 23632


description: domain/bacteria

description: ASM2217964v1 assembly for Methylobacterium thuringiense DSM 23674


description: domain/bacteria

family: Micrococcaceae

full scientific name: Micrococcus luteus (Schroeter 1872) Cohn 1872 (Approved Lists 1980)

genus: Micrococcus

species: Micrococcus luteus

synonym: Micrococcus yunnanensis

synonym: Bacteridium luteum

synonym: Micrococcus aloeverae

full scientific name: Micrococcus luteus (Schroeter 1872) Cohn 1872 emend. Nouioui et al. 2018


description: domain/bacteria

full scientific name: Pediococcus pentosaceus Mees 1934 (Approved Lists 1980)

genus: Pediococcus

species: Pediococcus pentosaceus

full scientific name: Pediococcus pentosaceus Mees 1934

description: Pediococcus sp. JM80 16S ribosomal RNA gene, partial sequence

description: ASM1561323v1 assembly for Pediococcus pentosaceus DSM 28628

description: ASM2462200v1 assembly for Pediococcus pentosaceus DSM 28628


description: domain/bacteria

family: Caulobacteraceae

full scientific name: Phenylobacterium immobile Lingens et al. 1985

genus: Phenylobacterium

order: Caulobacterales

species: Phenylobacterium immobile

synonym: Phenylobacterium immobilis

strain designation: N


description: domain/bacteria

family: Morganellaceae

full scientific name: Proteus mirabilis Hauser 1885 (Approved Lists 1980)

genus: Proteus

order: Enterobacterales

species: Proteus mirabilis

full scientific name: Proteus mirabilis Hauser 1885

description: Proteus sp. CD1-T1542 16S ribosomal RNA gene, partial sequence

description: ASM2462198v1 assembly for Proteus mirabilis DSM 28629


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)

genus: Pseudomonas

order: Pseudomonadales

species: Pseudomonas aeruginosa

synonym: Pseudomonas paraeruginosa

synonym: Bacterium aeruginosum


description: domain/bacteria

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900

description: Pseudomonas aeruginosa strain Z5 16S ribosomal RNA gene, complete sequence


description: domain/bacteria

description: Pseudomonas aeruginosa strain JP-11 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

strain designation: W

description: 35891_E01 assembly for Pseudomonas aeruginosa NCTC12951


description: domain/bacteria

full scientific name: Pseudomonas putida (Trevisan 1889) Migula 1895 (Approved Lists 1980)

species: Pseudomonas putida

synonym: Arthrobacter siderocapsulatus

synonym: Bacillus putidus

description: Pseudomonas putida strain Z2 16S ribosomal RNA gene, complete sequence


description: domain/bacteria

full scientific name: Pseudomonas putida (Trevisan 1889) Migula 1895


description: domain/bacteria

strain designation: TEC1 407.1-delta 2


description: domain/bacteria

strain designation: TEC1 407.3-delta2


description: domain/bacteria

strain designation: TEC1 407-delta1


class: Betaproteobacteria

description: domain/bacteria

family: Burkholderiaceae

genus: Ralstonia

order: Burkholderiales

species: Ralstonia solanacearum

synonym: Bacillus solanacearum

synonym: Burkholderia solanacearum

synonym: Pseudomonas solanacearum

full scientific name: Ralstonia solanacearum (Smith 1896) Yabuuchi et al. 1996 emend. Safni et al. 2014


description: domain/bacteria

full scientific name: <I>Pseudomonas</I> Migula 1894 (Approved Lists 1980)

species: Pseudomonas sp.

synonym: Metapseudomonas

synonym: Zestomonas

synonym: Caenipseudomonas

synonym: Phytopseudomonas

synonym: Ectopseudomonas

synonym: Aquipseudomonas

synonym: Geopseudomonas

synonym: Flavimonas

synonym: Chryseomonas

full scientific name: Pseudomonas sp.

description: Pseudomonas nitroreducens strain SN2 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Pseudomonas oleovorans Lee and Chandler 1941 (Approved Lists 1980)

species: Pseudomonas oleovorans

synonym: Ectopseudomonas pseudoalcaligenes

synonym: Pseudomonas pseudoalcaligenes

synonym: Ectopseudomonas oleovorans

full scientific name: Pseudomonas oleovorans Lee and Chandler 1941 emend. Saha et al. 2010

description: Pseudomonas sp. 230G 16S ribosomal RNA gene, partial sequence

description: ASM2462196v1 assembly for Ectopseudomonas oleovorans DSM 28630


description: domain/bacteria

description: Pseudomonas sp. SBV1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Stutzerimonas stutzeri (Lehmann and Neumann 1896) Lalucat et al. 2022

genus: Stutzerimonas

species: Stutzerimonas stutzeri

synonym: Bacterium stutzeri

synonym: Pseudomonas stutzeri

full scientific name: Pseudomonas stutzeri (Lehmann and Neumann 1896) Sijderius 1946

species: Pseudomonas stutzeri

description: Pseudomonas sp. DSM 24582 partial 16S rRNA gene, strain DSM 24582, isolate ST-9

description: ASM98286v1 assembly for Stutzerimonas stutzeri ST-9


description: domain/bacteria

description: Pseudomonas stutzeri strain SN1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Nocardiaceae

full scientific name: Rhodococcus rhodochrous (Zopf 1891) Tsukamura 1974 (Approved Lists 1980)

genus: Rhodococcus

order: Mycobacteriales

species: Rhodococcus rhodochrous

synonym: Staphylococcus rhodochrous

synonym: Rhodococcus roseus

full scientific name: Rhodococcus rhodochrous (Zopf 1891) Tsukamura 1974 emend. Nouioui et al. 2018

description: Rhodococcus sp. PY11 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Yersiniaceae

full scientific name: Serratia marcescens Bizio 1823 (Approved Lists 1980)

genus: Serratia

species: Serratia marcescens

synonym: Serratia marcescens subsp. sakuensis

full scientific name: Serratia marcescens Bizio 1823

order: Enterobacteriales, not validated


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus capitis Kloos and Schleifer 1975 (Approved Lists 1980)

genus: Staphylococcus

species: Staphylococcus capitis


description: domain/bacteria

full scientific name: Staphylococcus capitis Kloos and Schleifer 1975


description: domain/bacteria

full scientific name: Staphylococcus lentus (Kloos et al. 1976) Schleifer et al. 1983

species: Staphylococcus lentus

synonym: Staphylococcus sciuri subsp. lentus

synonym: Mammaliicoccus lentus

full scientific name: Mammaliicoccus lentus (Kloos et al. 1976) Madhaiyan et al. 2020

genus: Mammaliicoccus

species: Mammaliicoccus lentus

description: Staphylococcus sp. WCA-CC-3-1 16S ribosomal RNA gene, partial sequence

description: ASM2462222v1 assembly for Mammaliicoccus lentus DSM 100111


description: domain/bacteria

full scientific name: Staphylococcus lugdunensis Freney et al. 1988

species: Staphylococcus lugdunensis


description: domain/bacteria

full scientific name: Staphylococcus warneri Kloos and Schleifer 1975 (Approved Lists 1980)

species: Staphylococcus warneri

description: Staphylococcus warneri strain JM8 16S ribosomal RNA gene, partial sequence

description: ASM2462192v1 assembly for Staphylococcus warneri DSM 28567


description: domain/bacteria

full scientific name: Staphylococcus warneri Kloos and Schleifer 1975


description: domain/bacteria

full scientific name: Staphylococcus xylosus Schleifer and Kloos 1975 (Approved Lists 1980)

species: Staphylococcus xylosus

description: Staphylococcus sp. ERD13C 16S ribosomal RNA gene, partial sequence

description: ASM2462188v1 assembly for Staphylococcus xylosus DSM 28566


description: domain/bacteria

full scientific name: Streptomyces lonarensis Sharma et al. 2016

species: Streptomyces lonarensis

description: Streptomyces lonarensis strain NCL 716 16S ribosomal RNA gene, partial sequence

description: ASM3624614v1 assembly for Streptomyces lonarensis DSM 42084

description: ASM1203373v1 assembly for Streptomyces lonarensis NCL716


description: domain/bacteria

full scientific name: Streptomyces formicae Bai et al. 2016

species: Streptomyces formicae

description: Streptomyces formicae strain 1H-GS9 16S ribosomal RNA gene, partial sequence

description: ASM2264766v1 assembly for Streptomyces formicae 1H-GS9

description: ASM4265586v1 assembly for Streptomyces formicae CGMCC 4.7277


class: Deinococci

description: domain/bacteria

family: Thermaceae

full scientific name: <I>Thermus</I> Brock and Freeze 1969 (Approved Lists 1980)

genus: Thermus

keyword: phylum/deinococcota

order: Thermales

phylum: Deinococcota

species: Thermus sp.

full scientific name: Thermus sp.

phylum: Deinococcus-Thermus

description: Thermus sp. AA/04 partial 16S rRNA gene


description: domain/bacteria

family: Vibrionaceae

full scientific name: Vibrio parahaemolyticus (Fujino et al. 1951) Sakazaki et al. 1963 (Approved Lists 1980)

genus: Vibrio

order: Vibrionales

species: Vibrio parahaemolyticus

synonym: Beneckea parahaemolytica

synonym: Pasteurella parahaemolytica

full scientific name: Vibrio parahaemolyticus (Fujino et al. 1951) Sakazaki et al. 1963 emend. West et al. 1986

order: Vibrionales, not validated


description: domain/bacteria

family: Lysobacteraceae

full scientific name: Stenotrophomonas maltophilia (Hugh 1981 ex Hugh and Ryschenkow 1961) Palleroni and Bradbury 1993

genus: Stenotrophomonas

order: Lysobacterales

species: Stenotrophomonas maltophilia

synonym: Stenotrophomonas africana

synonym: Xanthomonas maltophilia

synonym: Pseudomonas maltophilia

full scientific name: Stenotrophomonas maltophilia (Hugh 1981) Palleroni and Bradbury 1993

order: Lysobacteraceae, not assigned to order


description: domain/bacteria

full scientific name: Stenotrophomonas muris Afrizal et al. 2025

species: Stenotrophomonas muris

full scientific name: Stenotrophomonas muris

description: Stenotrophomonas sp. pT2-440Y 16S ribosomal RNA gene, partial sequence

description: ASM2462193v1 assembly for Stenotrophomonas muris DSM 28631


culture collection no.: DSM 14017, PROIMI A1

description: domain/bacteria

family: Zymomonadaceae

full scientific name: Zymomonas mobilis corrig. (Lindner 1928) Kluyver and van Niel 1936 (Approved Lists 1980)

genus: Zymomonas

order: Sphingomonadales

species: Zymomonas mobilis

synonym: Zymomonas mobile

synonym: Thermobacterium mobile

full scientific name: Zymomonas mobilis (Lindner 1928) Kluyver and van Niel 1936

description: Zymomonas mobilis 16S ribosomal RNA gene, partial sequence

description: Zymomonas mobilis strain PROIMI A1 16S-23S internal transcribed spacer, complete sequence.

description: ASM671596v1 assembly for Zymomonas mobilis

description: Zymomonas mobilis mobilis DSM 14017


culture collection no.: DSM 22795, ATCC BAA-749

description: domain/bacteria

family: Bartonellaceae

full scientific name: Brucella anthropi (Holmes et al. 1988) Hördt et al. 2020

genus: Brucella

species: Brucella anthropi

synonym: Ochrobactrum anthropi

family: Brucellaceae

full scientific name: Ochrobactrum anthropi Holmes et al. 1988

genus: Ochrobactrum

species: Ochrobactrum anthropi


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lactobacillus johnsonii Fujisawa et al. 1992

genus: Lactobacillus

order: Lactobacillales

species: Lactobacillus johnsonii

description: Lactobacillus johnsonii strain DSM 100219 16S ribosomal RNA gene, partial sequence

description: ASM2462248v1 assembly for Lactobacillus johnsonii DSM 100219


description: domain/bacteria

family: Bifidobacteriaceae

full scientific name: Bifidobacterium animalis (Mitsuoka 1969) Scardovi and Trovatelli 1974 (Approved Lists 1980)

genus: Bifidobacterium

order: Bifidobacteriales

species: Bifidobacterium animalis

synonym: Bifidobacterium longum subsp. animalis

full scientific name: Bifidobacterium animalis (Mitsuoka 1969) Scardovi and Trovatelli 1974 emend. Masco et al. 2004

description: Bifidobacterium animalis strain SJ19 16S ribosomal RNA gene, partial sequence

description: ASM2462301v1 assembly for Bifidobacterium animalis subsp. animalis DSM 28736


description: domain/bacteria

description: Bifidobacterium animalis strain YL2 16S ribosomal RNA gene, partial sequence

description: ASM168864v2 assembly for Bifidobacterium animalis subsp. animalis YL2

description: ASM1669672v1 assembly for Bifidobacterium animalis YL2

description: ASM2327865v1 assembly for Bifidobacterium animalis YL2

description: ASM222156v2 assembly for Bifidobacterium animalis subsp. animalis YL2


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Klebsiella pneumoniae (Schroeter 1886) Trevisan 1887 (Approved Lists 1980)

genus: Klebsiella

species: Klebsiella pneumoniae

synonym: Hyalococcus pneumoniae

description: Klebsiella pneumoniae partial 16S rRNA gene


description: domain/bacteria

full scientific name: <I>Klebsiella</I> Trevisan 1885 (Approved Lists 1980)

species: Klebsiella sp.

synonym: Raoultella

synonym: Calymmatobacterium

full scientific name: Klebsiella sp.

description: ASM148234v1 assembly for Klebsiella pneumoniae J1


description: domain/bacteria

family: Pectobacteriaceae

full scientific name: Pectobacterium carotovorum (Jones 1901) Waldee 1945 (Approved Lists 1980)

genus: Pectobacterium

species: Pectobacterium carotovorum

synonym: Bacillus carotovorus

synonym: Erwinia carotovora

full scientific name: Pectobacterium carotovorum (Jones 1901) Waldee 1945 emend. Gardan et al. 2003


description: domain/bacteria

family: Methylophilaceae

full scientific name: <I>Methylobacillus</I> Yordy and Weaver 1977 (Approved Lists 1980)

genus: Methylobacillus

order: Spirillales

species: Methylobacillus sp.

full scientific name: Methylobacillus sp.


description: domain/bacteria

description: Aminomonas aminovorus C2A1 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Methylophilus glucosoxydans Doronina et al. 2012

genus: Methylophilus

species: Methylophilus glucosoxydans

strain designation: B


description: domain/bacteria

family: Nocardiopsidaceae

full scientific name: <I>Nocardiopsis</I> (Brocq-Rousseau 1904) Meyer 1976 (Approved Lists 1980)

genus: Nocardiopsis

order: Streptosporangiales

species: Nocardiopsis sp.

synonym: Brachystreptospora

family: Nocardiopsaceae

full scientific name: Nocardiopsis sp.

order: Actinomycetales

description: Nocardiopsis sp. AH63 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Thermoactinomycetaceae

full scientific name: Thermoactinomyces khenchelensis Mokrane et al. 2017

genus: Thermoactinomyces

order: Caryophanales

species: Thermoactinomyces khenchelensis

order: Bacillales

description: Thermoactinomyces khenchelensis strain T36 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Kaistiaceae

full scientific name: <I>Prosthecomicrobium</I> Staley 1968 (Approved Lists 1980)

genus: Prosthecomicrobium

order: Hyphomicrobiales

species: Prosthecomicrobium sp.

family: Hyphomicrobiaceae

full scientific name: Prosthecomicrobium sp.

order: Rhizobiales

strain designation: Strain 5


description: domain/bacteria


description: domain/bacteria

strain designation: strain 1


description: domain/bacteria

family: Devosiaceae

full scientific name: Devosia enhydra (Staley 1968) Park et al. 2016

genus: Devosia

species: Devosia enhydra

synonym: Vasilyevaea enhydra

synonym: Prosthecomicrobium enhydrum


description: domain/bacteria

full scientific name: Prosthecomicrobium pneumaticum Staley 1968 (Approved Lists 1980)

species: Prosthecomicrobium pneumaticum

description: ASM1419991v1 assembly for Prosthecomicrobium pneumaticum DSM 16268


description: domain/bacteria

family: Bacillaceae

full scientific name: Bacillus mojavensis Roberts et al. 1994

genus: Bacillus

species: Bacillus mojavensis

full scientific name: Bacillus mojavensis Roberts et al. 1994 emend. Wang et al. 2007


description: domain/bacteria

full scientific name: Buttiauxella ferragutiae Müller et al. 1996

genus: Buttiauxella

order: Enterobacterales

species: Buttiauxella ferragutiae


description: domain/bacteria

full scientific name: Buttiauxella gaviniae Müller et al. 1996

species: Buttiauxella gaviniae

order: Enterobacteriales, not validated


description: domain/bacteria

strain designation: EG59-like Z 2132


description: domain/bacteria

full scientific name: Buttiauxella brennerae Müller et al. 1996

species: Buttiauxella brennerae


description: domain/bacteria

full scientific name: Buttiauxella izardii Müller et al. 1996

species: Buttiauxella izardii


description: domain/bacteria

strain designation: EG 59-like NSW 155


description: domain/bacteria

strain designation: EG 59-like RA 144


description: domain/bacteria

full scientific name: Buttiauxella noackiae Müller et al. 1996

species: Buttiauxella noackiae

strain designation: EG 59-like RA 116


description: domain/bacteria


description: domain/bacteria

full scientific name: Buttiauxella warmboldiae Müller et al. 1996

species: Buttiauxella warmboldiae

strain designation: EG 59-like SA 420


description: domain/bacteria

family: Corynebacteriaceae

genus: Corynebacterium

order: Mycobacteriales

species: Corynebacterium glucuronolyticum

synonym: Corynebacterium seminale

full scientific name: Corynebacterium glucuronolyticum Funke et al. 1995 emend. Nouioui et al. 2018

description: ASM1672864v1 assembly for Corynebacterium glucuronolyticum FDAARGOS_1111

description: Corynebacterium glucuronolyticum strain FDAARGOS_1111


description: domain/bacteria

family: Micrococcaceae

full scientific name: Arthrobacter crygenae Vasil'eva et al. 1998

genus: Arthrobacter

order: Micrococcales

species: Arthrobacter crygenae


description: domain/bacteria

family: Staphylococcaceae

full scientific name: Staphylococcus pasteuri Chesneau et al. 1993

genus: Staphylococcus

species: Staphylococcus pasteuri

description: ASM1672528v1 assembly for Staphylococcus pasteuri FDAARGOS_1151


description: domain/bacteria

description: ASM1672520v1 assembly for Staphylococcus pasteuri FDAARGOS_1152


description: domain/bacteria

description: ASM1688860v1 assembly for Staphylococcus pasteuri FDAARGOS_1206


description: domain/bacteria

full scientific name: Staphylococcus saprophyticus (Fairbrother 1940) Shaw et al. 1951 (Approved Lists 1980)

species: Staphylococcus saprophyticus

synonym: Staphylococcus saprophyticus subsp. bovis

synonym: Staphylococcus saprophyticus

description: Staphylococcus saprophyticus subsp. saprophyticus strain DSM 100654 16S ribosomal RNA gene, partial sequence.

description: Staphylococcus saprophyticus subsp. saprophyticus strain DSM 100654 16S ribosomal RNA gene, partial sequence 16S-23S ribosomal RNA intergenic spacer, complete sequence and 23S ribosomal RNA gene, partial sequence.


description: domain/bacteria

full scientific name: Staphylococcus saprophyticus (Fairbrother 1940) Shaw et al. 1951


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas veronii Elomari et al. 1996

genus: Pseudomonas

order: Pseudomonadales

species: Pseudomonas veronii


description: domain/bacteria

family: Streptosporangiaceae

full scientific name: Microbispora bryophytorum subsp. camponoti (Han et al. 2016) Bouras and Machado 2025

genus: Microbispora

synonym: Microbispora camponoti

description: Microbispora camponoti strain 2C-HV3 16S ribosomal RNA gene, partial sequence

description: ASM1471274v1 assembly for Microbispora bryophytorum subsp. camponoti 2C-HV3


description: domain/bacteria

full scientific name: Kocuria palustris Kovács et al. 1999

genus: Kocuria

species: Kocuria palustris


description: domain/bacteria

family: Caryophanaceae

full scientific name: Sporosarcina limicola (Maiden and Jones 1985) Gupta and Patel 2020

genus: Sporosarcina

species: Sporosarcina limicola

synonym: Filibacter limicola


description: domain/bacteria

full scientific name: Staphylococcus hominis Kloos and Schleifer 1975 (Approved Lists 1980)

species: Staphylococcus hominis

full scientific name: Staphylococcus hominis Kloos and Schleifer 1975 emend. Kloos et al. 1998


description: domain/bacteria

family: Paracoccaceae

full scientific name: <I>Paracoccus</I> Davis 1969 (Approved Lists 1980)

genus: Paracoccus

order: Rhodobacterales

species: Paracoccus sp.

synonym: Thiosphaera

family: Rhodobacteraceae

full scientific name: Paracoccus sp.

description: Paracoccus sp. BD-d317 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Pseudomonas graminis Behrendt et al. 1999

species: Pseudomonas graminis


description: domain/bacteria

family: Gordoniaceae

full scientific name: Gordonia didemni de Menezes et al. 2016

genus: Gordonia

species: Gordonia didemni

description: Gordonia didemni strain B204 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: <I>Amaricoccus</I> Maszenan et al. 1997

genus: Amaricoccus

species: Amaricoccus sp.

full scientific name: Amaricoccus sp.

description: T.cechii 16S rRNA gene, Italian strain


description: domain/bacteria

full scientific name: Pseudomonas frederiksbergensis Andersen et al. 2000

species: Pseudomonas frederiksbergensis


description: domain/bacteria

family: Pseudoalteromonadaceae

full scientific name: Pseudoalteromonas distincta (Romanenko et al. 1995) Ivanova et al. 2000

genus: Pseudoalteromonas

order: Alteromonadales

species: Pseudoalteromonas distincta

synonym: Pseudoalteromonas elyakovii

synonym: Alteromonas elyakovii

synonym: Pseudoalteromonas paragorgicola

synonym: Alteromonas distincta

description: Alteromonas distincta 16S ribosomal RNA gene, partial sequence

description: Pseudoalteromonas distincta strain ATCC 700518 16S ribosomal RNA gene, partial sequence.

description: ASM81467v1 assembly for Pseudoalteromonas distincta ATCC 700518


description: domain/bacteria

full scientific name: Pseudoalteromonas elyakovii (Ivanova et al. 1997) Sawabe et al. 2000

species: Pseudoalteromonas elyakovii

description: Alteromonas elyakovii 16S ribosomal RNA gene, partial sequence

description: ASM81466v1 assembly for Pseudoalteromonas flavipulchra NCIMB 2033 = ATCC BAA-314 ATCC:BAA-314


description: domain/bacteria

species: Bacillus thermoamylovorans

synonym: Caldibacillus thermoamylovorans

full scientific name: Bacillus thermoamylovorans Combet-Blanc et al. 1995 emend. Coorevits et al. 2011

description: Caldibacillus thermoamylovorans strain Amp-choc19 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: <I>Geobacillus</I> Nazina et al. 2001

genus: Geobacillus

species: Geobacillus sp.

full scientific name: Geobacillus sp.


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Enterobacter kobei Kosako et al. 1997

genus: Enterobacter

species: Enterobacter kobei

full scientific name: Enterobacter kobei Kosako et al. 1997 emend. Hoffmann et al. 2005

description: Enterobacter kobei gene for 16S rRNA, partial sequence, strain: JCM 8580

description: Enterobacter kobei partial 16S rRNA gene, strain CIP 105566

description: Enterobacter kobei strain DSM 13645 16S ribosomal RNA gene, partial sequence.

description: ASM1832398v1 assembly for Enterobacter kobei JCM 8580

description: ASM172976v1 assembly for Enterobacter kobei DSM 13645

description: IMG-taxon 2681812896 annotated assembly for Enterobacter kobei ATCC BAA-260

description: Enterobacter_kobei_DSM27110T_ERS788665 assembly for Enterobacter kobei

description: ASM194029v1 assembly for Enterobacter kobei JCM 8580


description: domain/bacteria

family: Psychromonadaceae

full scientific name: Psychromonas ingrahamii Auman et al. 2006

genus: Psychromonas

species: Psychromonas ingrahamii

description: ASM1528v1 assembly for Psychromonas ingrahamii 37


description: domain/bacteria

full scientific name: Pseudomonas indica Pandey et al. 2002

species: Pseudomonas indica


description: domain/bacteria

family: Vibrionaceae

full scientific name: Vibrio cholerae Pacini 1854 (Approved Lists 1980)

genus: Vibrio

order: Vibrionales

species: Vibrio cholerae

synonym: Vibrio albensis

full scientific name: Vibrio cholerae Pacini 1854

order: Vibrionales, not validated


description: domain/bacteria

full scientific name: Enterobacter hormaechei subsp. oharae Hoffmann et al. 2016

species: Enterobacter hormaechei subsp. oharae

description: Enterobacter hormaechei subsp. oharae 16S rRNA gene, type strain EN-314T

description: ASM172970v1 assembly for Enterobacter hormaechei subsp. oharae DSM 16687

description: ASM2009719v1 assembly for Enterobacter hormaechei subsp. oharae FDAARGOS_1533

description: Enterobacter hormaechei subsp. oharae strain FDAARGOS_1533


description: domain/bacteria

family: Zoogloeaceae

full scientific name: Thauera aminoaromatica Mechichi et al. 2002

genus: Thauera

order: Rhodocyclales

species: Thauera aminoaromatica

description: Thauera sp. mz1t 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Morganellaceae

full scientific name: Arsenophonus nasoniae Gherna et al. 1991

genus: Arsenophonus

species: Arsenophonus nasoniae


description: domain/bacteria

family: Microbacteriaceae

full scientific name: Okibacterium fritillariae Evtushenko et al. 2002

genus: Okibacterium

species: Okibacterium fritillariae


description: domain/bacteria

family: Actinomycetaceae

full scientific name: Actinomyces bowdenii Pascual et al. 1999

genus: Actinomyces

species: Actinomyces bowdenii

description: Actinomyces sp. ERD15F 16S ribosomal RNA gene, partial sequence

description: ASM2462333v1 assembly for Actinomyces bowdenii DSM 28589


description: domain/bacteria

family: Acetobacteraceae

full scientific name: Craurococcus roseus Saitoh et al. 1998

genus: Craurococcus

order: Rhodospirillales

species: Craurococcus roseus

description: Craurococcus roseus gene for 16S rRNA, partial sequence, strain: NS130

description: Craurococcus roseus gene for 16S ribosomal RNA, partial sequence, strain: JCM 9933

description: Craurococcus roseus partial 16S rRNA gene, type strain DSM 15488T

description: ASM3952379v1 assembly for Craurococcus roseus JCM 9933


description: domain/bacteria

family: Lachnospiraceae

full scientific name: Enterocloster bolteae (Song et al. 2003) Haas and Blanchard 2020

genus: Enterocloster

order: Eubacteriales

species: Enterocloster bolteae

synonym: Clostridium bolteae

synonym: Lachnoclostridium bolteae

order: Clostridiales

description: Clostridium sp. MT10-315-CC-82 16S ribosomal RNA gene, partial sequence

description: ASM2462273v1 assembly for Enterocloster bolteae DSM 29485


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Paenibacillus lactis Scheldeman et al. 2004

genus: Paenibacillus

order: Caryophanales

species: Paenibacillus lactis

description: Paenibacillus sp. pT2-260P 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Pseudoalteromonas fuliginea (Romanenko et al. 1995) Machado et al. 2016

species: Pseudoalteromonas fuliginea

synonym: Alteromonas fuliginea


description: domain/bacteria

full scientific name: Pseudoalteromonas maricaloris Ivanova et al. 2002

species: Pseudoalteromonas maricaloris

synonym: Pseudoalteromonas flavipulchra

description: Pseudoalteromonas maricaloris 16S ribosomal RNA gene, partial sequence

description: ASM1264172v1 assembly for Pseudoalteromonas maricaloris LMG 19692

description: ASM3334401v1 assembly for Pseudoalteromonas maricaloris DSM 15914


description: domain/bacteria

family: Micrococcaceae

full scientific name: Rothia amarae Fan et al. 2002

genus: Rothia

species: Rothia amarae

order: Actinomycetales


class: Bacteroidia

description: domain/bacteria

family: Bacteroidaceae

full scientific name: Bacteroides acidifaciens Miyamoto and Itoh 2000

genus: Bacteroides

order: Bacteroidales

phylum: Bacteroidota

species: Bacteroides acidifaciens

phylum: Bacteroidetes

description: Bacteroides acidifaciens strain JJM0207-2 16S ribosomal RNA gene, partial sequence

description: ASM2462311v1 assembly for Bacteroides acidifaciens DSM 100502


description: domain/bacteria

family: Methylophilaceae

full scientific name: Methylobacillus pratensis Doronina et al. 2004

genus: Methylobacillus

order: Spirillales

species: Methylobacillus pratensis


description: domain/bacteria

family: Desulfovibrionaceae

full scientific name: Oleidesulfovibrio alaskensis (Feio et al. 2004) Waite et al. 2020

genus: Oleidesulfovibrio

order: Desulfovibrionales

species: Oleidesulfovibrio alaskensis

synonym: Desulfovibrio alaskensis

class: Deltaproteobacteria

description: Desulfovibrio alaskensis strain HEB223 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Maribacter ulvicola Nedashkovskaya et al. 2004

genus: Maribacter

order: Flavobacteriales

species: Maribacter ulvicola


description: domain/bacteria

family: Burkholderiaceae

full scientific name: Pandoraea pnomenusa Coenye et al. 2000

genus: Pandoraea

order: Burkholderiales

species: Pandoraea pnomenusa

description: Pandoraea pnomenusa strain B-356 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: <I>Curtobacterium</I> Yamada and Komagata 1972 (Approved Lists 1980)

genus: Curtobacterium

order: Micrococcales

species: Curtobacterium sp.

full scientific name: Curtobacterium sp.


description: domain/bacteria

full scientific name: Enterobacter hormaechei subsp. steigerwaltii Hoffmann et al. 2016

genus: Enterobacter

order: Enterobacterales

order: Enterobacteriales, not validated

description: Enterobacter hormaechei subsp. steigerwaltii 16S rRNA gene, type strain EN-562T

description: Enterobacter hormaechei subsp. steigerwaltii strain DSM 16691 16S ribosomal RNA gene, partial sequence.

description: Enterobacter hormaechei subsp. steigerwaltii strain DSM 16691(T) 16S ribosomal RNA gene, partial sequence.

description: ASM172972v1 assembly for Enterobacter hormaechei subsp. steigerwaltii DSM 16691

description: ASM1904794v1 assembly for Enterobacter hormaechei FDAARGOS 1434


description: domain/bacteria

family: Idiomarinaceae

full scientific name: <I>Idiomarina</I> Ivanova et al. 2000

genus: Idiomarina

order: Alteromonadales

species: Idiomarina sp.

full scientific name: Idiomarina sp.

description: Idiomarina sp. Y3 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Oscillospiraceae

full scientific name: Anaerotruncus colihominis Lawson et al. 2004

genus: Anaerotruncus

species: Anaerotruncus colihominis

description: Anaerotruncus colihominis strain JM4-15 16S ribosomal RNA gene, partial sequence

description: ASM1020619v1 assembly for Anaerotruncus colihominis JM4-15

description: ASM2462319v1 assembly for Anaerotruncus colihominis DSM 28734


description: domain/bacteria

family: Eubacteriaceae

full scientific name: Anaerofustis stercorihominis Finegold et al. 2004

genus: Anaerofustis

species: Anaerofustis stercorihominis

description: Anaerofustis stercorihominis strain WHC-424-CC-1 16S ribosomal RNA gene, partial sequence

description: ASM2462318v1 assembly for Anaerofustis stercorihominis DSM 28733


description: domain/bacteria

family: Bacillaceae

full scientific name: Exiguobacterium oxidotolerans Yumoto et al. 2004

genus: Exiguobacterium

species: Exiguobacterium oxidotolerans

family: Bacilli, not assigned to family

order: Bacilli, not assigned to order

description: Exiguobacterium oxidotolerans isolate AE3 16S ribosomal RNA gene, complete sequence


class: Alphaproteobacteria

description: domain/bacteria

family: Stappiaceae

full scientific name: Pseudovibrio denitrificans Shieh et al. 2004

genus: Pseudovibrio

order: Hyphomicrobiales

species: Pseudovibrio denitrificans

order: Rhodobacterales


description: domain/bacteria

full scientific name: <I>Flagellimonas</I> Bae et al. 2007

genus: Flagellimonas

species: Flagellimonas sp.

synonym: Spongiibacterium

synonym: Allomuricauda

synonym: Muricauda

full scientific name: Muricauda sp.

genus: Muricauda

species: Muricauda sp.


class: Gammaproteobacteria

description: domain/bacteria

family: Vibrionaceae

full scientific name: Vibrio halioticoli Sawabe et al. 1998

genus: Vibrio

order: Vibrionales

species: Vibrio halioticoli

order: Vibrionales, not validated


description: domain/bacteria

family: Dermacoccaceae

full scientific name: <I>Dermacoccus</I> Stackebrandt et al. 1995

genus: Dermacoccus

species: Dermacoccus sp.

full scientific name: Dermacoccus sp.


description: domain/bacteria

family: Enterobacteriaceae

full scientific name: Enterobacter cancerogenus (Urosevic 1966) Dickey and Zumoff 1988

species: Enterobacter cancerogenus

synonym: Erwinia cancerogena

synonym: Enterobacter taylorae

description: ASM77396v1 assembly for Enterobacter cancerogenus M004


description: domain/bacteria

family: Pseudomonadaceae

full scientific name: Pseudomonas alcaliphila Yumoto et al. 2001

genus: Pseudomonas

order: Pseudomonadales

species: Pseudomonas alcaliphila

synonym: Ectopseudomonas alcaliphila

description: Pseudomonas alcaliphila strain NE3B02 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

genus: Salegentibacter

species: Salegentibacter flavus

full scientific name: Salegentibacter flavus Ivanova et al. 2006 emend. Hahnke et al. 2016

strain designation: Fg 69


description: domain/bacteria

family: Rhodanobacteraceae

full scientific name: Rhodanobacter lindaniclasticus Nalin et al. 1999

genus: Rhodanobacter

order: Lysobacterales

species: Rhodanobacter lindaniclasticus

order: Xanthomonadales

description: Rhodanobacter lindaniclasticus gene for 16S rRNA, partial sequence, strain: Gsoil 549


description: domain/bacteria

description: Rhodanobacter lindaniclasticus gene for 16S rRNA, partial sequence

description: ASM479903v1 assembly for Rhodanobacter lindaniclasticus DSM 17932


description: domain/bacteria

description: Rhodanobacter lindaniclasticus gene for 16S rRNA, partial sequence, strain: Gsoil 3028


description: domain/bacteria

family: Caulobacteraceae

full scientific name: <I>Brevundimonas</I> Segers et al. 1994

genus: Brevundimonas

order: Caulobacterales

species: Brevundimonas sp.

full scientific name: Brevundimonas sp.

order: Rhizobiales

description: Psychrobacter sp. LFX-11D 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Weeksellaceae

full scientific name: <I>Chryseobacterium</I> Vandamme et al. 1994

genus: Chryseobacterium

species: Chryseobacterium sp.

synonym: Soonwooa

synonym: Halpernia

synonym: Epilithonimonas

synonym: Kaistella

synonym: Planobacterium

synonym: Sejongia

full scientific name: Chryseobacterium sp.

description: Chryseobacterium sp. B2 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

description: Chryseobacterium sp. S5 16S ribosomal RNA gene, partial sequence


class: Halobacteria

description: domain/archaea

family: Haloferacaceae

full scientific name: <I>Halorubrum</I> McGenity and Grant 1996

genus: Halorubrum

order: Halobacteriales

species: Halorubrum sp.

synonym: Halorubrobacterium

family: Halorubraceae

full scientific name: Halorubrum sp.

description: Halorubrum sp. D24 16S ribosomal RNA gene, partial sequence


class: Syntrophomonadia

description: domain/bacteria

family: Syntrophomonadaceae

full scientific name: <I>Candidatus</I> Contubernalis alkaliaceticus corrig. Zhilina et al. 2005

genus: Contubernalis

order: Syntrophomonadales

species: Contubernalis alkaliaceticus

synonym: Contubernalis alkalaceticum

full scientific name: Contubernalis alkalaceticum Zhilina et al. 2005

order: Eubacteriales

species: Contubernalis alkalaceticum

description: Candidatus Contubernalis alkalaceticum clone Z-7904 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Rhodospirillaceae

full scientific name: <I>Telmatospirillum</I> Sizova et al. 2007

genus: Telmatospirillum

order: Rhodospirillales

species: Telmatospirillum sp.

full scientific name: Telmatospirillum sp.


class: Thermococci

description: domain/archaea

family: Thermococcaceae

full scientific name: <I>Pyrococcus</I> Fiala and Stetter 1986

genus: Pyrococcus

order: Thermococcales

species: Pyrococcus sp.

full scientific name: Pyrococcus sp.

description: Pyrococcus sp. HT3 partial 16S rRNA gene, isolate HT3


description: domain/bacteria

family: Halomonadaceae

full scientific name: Halovibrio mesolongii Yan et al. 2022

genus: Halovibrio

order: Oceanospirillales

species: Halovibrio mesolongii

full scientific name: Halovibrio mesolongii

description: Halovibrio mesolongii partial 16S rRNA gene, type strain LSC2


description: domain/bacteria

full scientific name: Phenylobacterium falsum Tiago et al. 2005

genus: Phenylobacterium

species: Phenylobacterium falsum

description: Phenylobacterium falsum 16S rRNA gene, type strain AC-49T


culture collection no.: DSM 18585, WB VE1

class: Opitutae

family: Opitutaceae

full scientific name: Opitutus paludus

genus: Opitutus

order: Opitutales

phylum: Verrucomicrobia

species: Opitutus paludus


description: domain/bacteria

family: Sphingobacteriaceae

full scientific name: Pedobacter soli Kwon et al. 2011

genus: Pedobacter

order: Sphingobacteriales

species: Pedobacter soli


description: domain/bacteria

full scientific name: Pedobacter rhizosphaerae Kwon et al. 2011

species: Pedobacter rhizosphaerae


class: Thermomicrobia

description: domain/bacteria

family: Thermomicrobiaceae

full scientific name: Thermorudis peleae King and King 2014

genus: Thermorudis

keyword: phylum/thermomicrobiota

order: Thermomicrobiales

phylum: Thermomicrobiota

species: Thermorudis peleae

full scientific name: Thermorudis peleae King and King 2014 emend. Houghton et al. 2015

order: Thermomicrobia, not assigned to order

phylum: Thermomicrobia

description: Thermorudis peleae strain KI4 from USA 16S ribosomal RNA gene, partial sequence

description: ASM74477v1 assembly for Thermorudis peleae KI4


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lacticaseibacillus paracasei (Collins et al. 1989) Zheng et al. 2020

genus: Lacticaseibacillus

order: Lactobacillales

species: Lacticaseibacillus paracasei

synonym: Lactobacillus paracasei

full scientific name: Lactobacillus paracasei Collins et al. 1989

genus: Lactobacillus

species: Lactobacillus paracasei

description: Lactobacillus sp. 25 16S ribosomal RNA gene, partial sequence

description: ASM2462251v1 assembly for Lacticaseibacillus paracasei DSM 28675


description: domain/bacteria

family: Bartonellaceae

full scientific name: Bartonella doshiae Birtles et al. 1995

genus: Bartonella

order: Hyphomicrobiales

species: Bartonella doshiae

description: B.doshiae (R18 gene) for 16S ribosomal RNA

description: 57948_H01 assembly for Bartonella doshiae NCTC12862

description: ASM1420143v1 assembly for Bartonella doshiae DSM 102055

description: Bartonella_doshiae_CCUG50770 assembly for Bartonella doshiae CCUG 50770

description: Bart_dosh_NCTC_12862_R18_V1 assembly for Bartonella doshiae NCTC 12862 = ATCC 700133

description: ASM52689v1 assembly for Bartonella doshiae NCTC 12862 = ATCC 700133


description: domain/bacteria

family: Acetobacteraceae

full scientific name: Paracraurococcus ruber Saitoh et al. 1998

genus: Paracraurococcus

species: Paracraurococcus ruber

description: Paracraurococcus ruber gene for 16S ribosomal RNA, partial sequence, strain: JCM 9931

description: Paracraurococcus ruber gene for 16S rRNA, partial sequence, strain: NS89

description: ASM1658404v1 assembly for Paracraurococcus ruber DSM 15382

description: ASM435398v1 assembly for Paracraurococcus ruber JCM9931


class: Actinomycetes

description: domain/bacteria

family: Streptomycetaceae

genus: Kitasatospora

order: Kitasatosporales

species: Kitasatospora cheerisanensis

class: Actinobacteria

full scientific name: Kitasatospora cheerisanensis Chung et al. 1999 emend. Nouioui et al. 2018

order: Actinomycetales

strain designation: YC 75

description: Kitasatospora cheerisanensis 16S ribosomal RNA gene, partial sequence

description: ASM69618v1 assembly for Kitasatospora cheerisanensis KCTC 2395


class: Epsilonproteobacteria

description: domain/bacteria

family: Campylobacteraceae

full scientific name: Campylobacter lanienae Logan et al. 2000

genus: Campylobacter

order: Campylobacterales

species: Campylobacter lanienae

description: Campylobacter cf. lanienae UB 994 16S ribosomal RNA gene, partial sequence

description: Campylobacter lanienae strain NCTC 13004 16S ribosomal RNA gene, partial sequence.

description: Campylobacter lanienae NCTC 13004 strain CCUG 44467 16S ribosomal RNA gene, partial sequence.

description: ASM213993v1 assembly for Campylobacter lanienae NCTC 13004


description: domain/bacteria

family: Paracoccaceae

full scientific name: Paracoccus yeei corrig. Daneshvar et al. 2003

genus: Paracoccus

order: Rhodobacterales

species: Paracoccus yeei

synonym: Paracoccus yeeii

family: Rhodobacteraceae

full scientific name: Paracoccus yeei Daneshvar et al. 2003


description: domain/bacteria

family: Vibrionaceae

full scientific name: Vibrio fortis Thompson et al. 2003

genus: Vibrio

order: Vibrionales

species: Vibrio fortis

order: Vibrionales, not validated

description: Vibrio sp. AN60

description: ASM875692v1 assembly for Vibrio fortis AN60


description: domain/bacteria

family: Methylobacteriaceae

full scientific name: Microvirga flocculans (Takeda et al. 2004) Weon et al. 2010

genus: Microvirga

species: Microvirga flocculans

synonym: Balneimonas flocculans

synonym: Balneomonas flocculans

order: Rhizobiales

strain designation: TFB

description: ASM1419614v1 assembly for Microvirga flocculans DSM 15743


class: Flavobacteriia

description: domain/bacteria

family: Flavobacteriaceae

full scientific name: Formosa algae Ivanova et al. 2004

genus: Formosa

order: Flavobacteriales

species: Formosa algae

full scientific name: Formosa algae Ivanova et al. 2004 emend. Nedashkovskaya et al. 2006

description: Formosa algae KMM 3553 16S ribosomal RNA gene, partial sequence

description: Formosa algae partial 16S rRNA gene, strain KMM 3553, isolate AB356f

description: ASM143966v1 assembly for Formosa algae KMM 3553

description: ASM3081428v1 assembly for Formosa algae DSM 16476


class: Verrucomicrobiia

description: domain/bacteria

family: Akkermansiaceae

genus: Akkermansia

keyword: phylum/verrucomicrobiota

order: Verrucomicrobiales

phylum: Verrucomicrobiota

species: Akkermansia muciniphila

class: Verrucomicrobiae

full scientific name: Akkermansia muciniphila Derrien et al. 2004 emend. Hahnke et al. 2016

description: Akkermansia muciniphila strain YL44 16S ribosomal RNA gene, partial sequence

description: ASM168876v2 assembly for Akkermansia muciniphila YL44

description: ASM220149v1 assembly for Akkermansia muciniphila YL44

description: ASM1669742v1 assembly for Akkermansia muciniphila YL44


description: domain/bacteria

full scientific name: Rhodovarius lipocyclicus Kämpfer et al. 2004

genus: Rhodovarius

order: Rhodospirillales

species: Rhodovarius lipocyclicus

description: Rhodovarius lipocyclicus partial 16S rRNA gene, type strain CCUG 44693T

description: ASM990076v1 assembly for Rhodovarius lipocyclicus CCUG 44693


description: domain/bacteria

family: Tannerellaceae

full scientific name: Parabacteroides goldsteinii (Song et al. 2006) Sakamoto and Benno 2006

genus: Parabacteroides

order: Bacteroidales

species: Parabacteroides goldsteinii

synonym: Bacteroides goldsteinii

description: Parabacteroides goldsteinii strain BS-C3-2 16S ribosomal RNA gene, partial sequence


class: Cytophagia

description: domain/bacteria

family: Flammeovirgaceae

full scientific name: Flammeovirga arenaria (ex Lewin 1969) Takahashi et al. 2006

genus: Flammeovirga

order: Cytophagales

species: Flammeovirga arenaria

description: Microscilla arenaria gene for 16S rRNA, strain:IFO 15982

description: Flammeovirga arenaria gene for 16S rRNA, partial sequence, strain: NBRC 15982.


full scientific name: Rhodobacteraceae (not further classified)

genus: Rhodobacteraceae

order: Not assigned to order


species: Rhodobacteraceae (not further classified)


class: Clostridia

family: Thermoanaerobacteraceae

full scientific name: Caldanaerobacter subterraneus subsp. uzonensis

genus: Caldanaerobacter

order: Thermoanaerobacterales

strain designation: JW/HL-KA 09, JW/HL-KA-09, JW/HL-KA09

description: Caldanaerobacter uzonensis strain JW/HL-KA 09 16S ribosomal RNA gene, partial sequence


family: Clostridiaceae

full scientific name: Clostridium thermoislandicum

genus: Clostridium

order: Clostridiales

species: Clostridium thermoislandicum

description: Clostridium islandicum strain AK1 16S ribosomal RNA gene, partial sequence


full scientific name: Clostridium hveragerdense

species: Clostridium hveragerdense

description: Clostridium hveragerdense strain AK14 16S ribosomal RNA gene, partial sequence


full scientific name: Thermoanaerobacterium islandicum

genus: Thermoanaerobacterium

order: Clostridia, not assigned to order

species: Thermoanaerobacterium islandicum

description: Thermoanaerobacterium islandicum strain AK17 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

family: Halomonadaceae

full scientific name: <I>Halomonas</I> Vreeland et al. 1980

genus: Halomonas

order: Oceanospirillales

species: Halomonas sp.

synonym: Volcaniella

synonym: Franzmannia

synonym: Onishia

synonym: Billgrantia

synonym: Vreelandella

synonym: Deleya

synonym: Litchfieldella

synonym: Bisbaumannia

full scientific name: Halomonas sp.


family: Halorubraceae

full scientific name: Halorubrum africanae

genus: Halorubrum

order: Halobacteriales

phylum: Euryarchaeota

species: Halorubrum africanae

description: Halorubrum africanae strain S7 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Sediminitomix flava Khan et al. 2007

genus: Sediminitomix

species: Sediminitomix flava

description: Sediminitomix flava gene for 16S rRNA, partial sequence, strain: NBRC 101625.

description: ASM314918v1 assembly for Sediminitomix flava DSM 28229


description: domain/bacteria

family: Pectobacteriaceae

full scientific name: <I>Dickeya</I> Samson et al. 2005

genus: Dickeya

order: Enterobacterales

species: Dickeya sp.

synonym: Musicola

full scientific name: Dickeya sp.

order: Enterobacteriales, not validated


description: domain/bacteria

family: Roseobacteraceae

full scientific name: Jannaschia donghaensis Yoon et al. 2007

genus: Jannaschia

order: Rhodobacterales

species: Jannaschia donghaensis

description: Jannaschia donghaensis strain DSW-17 16S ribosomal RNA gene, partial sequence

description: J.donghaensisCECT7802_Velvet_Prokka assembly for Jannaschia donghaensis CECT 7802


description: domain/bacteria

full scientific name: <I>Lacinutrix</I> Bowman and Nichols 2005

genus: Lacinutrix

species: Lacinutrix sp.

synonym: Flavirhabdus

full scientific name: Lacinutrix sp.


class: Bacilli

description: domain/bacteria

family: Bacillaceae

full scientific name: <I>Salinibacillus</I> Ren and Zhou 2005

genus: Salinibacillus

order: Caryophanales

species: Salinibacillus sp.

full scientific name: Salinibacillus sp.

order: Bacillales


description: domain/bacteria

family: Paenibacillaceae

full scientific name: Paenibacillus urinalis Roux et al. 2008

genus: Paenibacillus

species: Paenibacillus urinalis


class: Bacteroidia

description: domain/bacteria

family: Bacteroidaceae

full scientific name: Bacteroides xylanisolvens Chassard et al. 2008

genus: Bacteroides

species: Bacteroides xylanisolvens

description: Bacteroides sp. JJM0207-12 16S ribosomal RNA gene, partial sequence


description: domain/bacteria

full scientific name: Oceanobacillus caeni Nam et al. 2008

genus: Oceanobacillus

species: Oceanobacillus caeni

description: Oceanobacillus caeni strain Amp-T16 16S ribosomal RNA gene, partial sequence

description: ASM2462226v1 assembly for Oceanobacillus caeni DSM 28620


description: domain/bacteria

full scientific name: Halomonas lutea Wang et al. 2008

species: Halomonas lutea

synonym: Modicisalibacter luteus


class: Rhodothermia

description: domain/bacteria

family: Rhodothermaceae

full scientific name: <I>Rhodothermus</I> Alfredsson et al. 1995

genus: Rhodothermus

keyword: phylum/rhodothermota

order: Rhodothermales

phylum: Rhodothermota

species: Rhodothermus sp.

full scientific name: Rhodothermus sp.

phylum: Rhodothermaeota


class: Betaproteobacteria

description: domain/bacteria

family: Sphaerotilaceae

full scientific name: <I>Sphaerotilus</I> Kützing 1833 (Approved Lists 1980)

genus: Sphaerotilus

order: Burkholderiales

species: Sphaerotilus sp.

family: Comamonadaceae

full scientific name: Sphaerotilus sp.

order: Betaproteobacteria, not assigned to order

description: Sphaerotilus natans subsp. sulfidivorans strain D-507 16S ribosomal RNA gene, partial sequence

description: ASM832992v1 assembly for Sphaerotilus sulfidivorans D-507


class: Gammaproteobacteria

description: domain/bacteria

family: Saccharospirillaceae

full scientific name: Saccharospirillum salsuginis Chen et al. 2009

genus: Saccharospirillum

species: Saccharospirillum salsuginis

strain designation: YIM-Y25, CGMCC


description: domain/bacteria

family: Lactobacillaceae

full scientific name: Lactobacillus taiwanensis Wang et al. 2009

genus: Lactobacillus

order: Lactobacillales

phylum: Bacillota

species: Lactobacillus taiwanensis

description: Lactobacillus sp. ST-465-5-N 16S ribosomal RNA gene, partial sequence

description: ASM2462243v1 assembly for Lactobacillus taiwanensis DSM 28674


description: domain/bacteria

phylum: Firmicutes

description: Lactobacillus taiwanensis strain DSM 100220 16S ribosomal RNA gene, partial sequence

description: ASM2462244v1 assembly for Lactobacillus taiwanensis DSM 100220


class: Alphaproteobacteria

description: domain/bacteria

full scientific name: Yoonia maritima (Tanaka et al. 2014) Wirth and Whitman 2018

genus: Yoonia

phylum: Pseudomonadota

species: Yoonia maritima

synonym: Loktanella maritima

family: Rhodobacteraceae

description: Loktanella maritima gene for 16S ribosomal RNA, partial sequence

description: ASM300328v1 assembly for Yoonia maritima DSM 101533


description: domain/bacteria

family: Lysobacteraceae

full scientific name: Lysobacter panacisoli Choi et al. 2014

genus: Lysobacter

order: Lysobacterales

species: Lysobacter panacisoli

order: Lysobacteraceae, not assigned to order

phylum: Proteobacteria

description: Lysobacter panacisoli strain CJ29 16S ribosomal RNA gene, partial sequence

description: ASM976516v1 assembly for Lysobacter panacisoli JCM 19212

description: ASM3954406v1 assembly for Lysobacter panacisoli JCM 19212


description: domain/bacteria

full scientific name: Priestia megaterium (de Bary 1884) Gupta et al. 2020

genus: Priestia

species: Priestia megaterium

synonym: Bacillus megaterium


description: domain/bacteria

full scientific name: Anaerobacillus alkalilacustris corrig. Zavarzina et al. 2010

genus: Anaerobacillus

species: Anaerobacillus alkalilacustris

synonym: Anaerobacillus alkalilacustre

full scientific name: Anaerobacillus alkalilacustris Zavarzina et al. 2010

description: Anaerobacillus alkalilacustris strain Z-0521 16S ribosomal RNA gene, partial sequence

description: ASM186600v1 assembly for Anaerobacillus alkalilacustris DSM 18345