ncbi_organism_name: Phycisphaerae bacterium

ncbi_submitter: University of Illinois Urbana-Champaign


gtdb_representative: f

gtdb_type_species_of_genus: f

ncbi_assembly_level: Scaffold

ncbi_country: USA: Rifle; CO

ncbi_genome_category: derived from metagenome

ncbi_genome_representation: full

ncbi_isolation_source: Rifle well CD01 at time point 3 / C; 5m depth; 0.2 filter

ncbi_organism_name: Elusimicrobia bacterium GWC2_51_8

ncbi_submitter: Banfield Lab, University of California, Berkeley

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Elusimicrobiota;x__unclassified Elusimicrobiota;s__Elusimicrobia bacterium GWC2_51_8


ncbi_assembly_level: Contig

ncbi_country: Canada: Edmonton

ncbi_isolation_source: feces day 7 after weanning

ncbi_organism_name: Clostridiales bacterium

ncbi_submitter: University of Alberta


ncbi_organism_name: Pseudomonadales bacterium

ncbi_submitter: Second Institute Of Oceanography,MNR


gtdb_representative: t

ncbi_organism_name: uncultured Pseudomonadota bacterium

ncbi_submitter: Center for Microbial Communities

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;x__environmental samples;s__uncultured Pseudomonadota bacterium


ncbi_assembly_name: gabuh8407 v01

ncbi_country: USA

ncbi_isolation_source: blood

ncbi_organism_name: Acinetobacter baumannii UH8407

ncbi_submitter: J. Craig Venter Institute


ncbi_country: USA:New York City

ncbi_isolation_source: metal

ncbi_organism_name: Leclercia adecarboxylata

ncbi_submitter: University of Queensland


ncbi_isolation_source: mouse gut metagenome

ncbi_organism_name: Akkermansia muciniphila

ncbi_submitter: EMG


ncbi_organism_name: Campylobacter molothri

ncbi_submitter: USDA, ARS, WRRC


ncbi_country: South Korea

ncbi_isolation_source: feces

ncbi_organism_name: Escherichia coli

ncbi_submitter: Korea Zoonosis Research Institute


ncbi_organism_name: Brevibacillus formosus

ncbi_submitter: USDA-ARS-NCAUR


ncbi_submitter: National Institute of Technology and Evaluation

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Nocardiaceae;g__Rhodococcus;s__Rhodococcus pyridinivorans;x__Rhodococcus pyridinivorans JCM 10940 = NBRC 100608

ncbi_type_material_designation: assembly from type material


ncbi_country: Canada: Alberta

ncbi_organism_name: Pseudomonas savastanoi pv. phaseolicola

ncbi_submitter: University of Toronto

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;x__Pseudomonas syringae group;x__Pseudomonas syringae group genomosp. 2;s__Pseudomonas savastanoi;x__Pseudomonas savastanoi pv. phaseolicola


ncbi_assembly_level: Complete Genome

ncbi_isolation_source: biological product [ENVO:02000043]

ncbi_submitter: Broad Institute

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;x__Bacteroidota/Chlorobiota group;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;x__unclassified Prevotella;s__Prevotella sp. oral taxon 299;x__Prevotella sp. oral taxon 299 str. F0039


ncbi_country: Guadeloupe: Pointe de la Grande Vigie; Guadeloupe; France

ncbi_isolation_source: termite gut

ncbi_organism_name: Treponema sp.

ncbi_submitter: Max Planck Institute for Terrestrial Microbiology


ncbi_country: China: Wei hai

ncbi_isolation_source: Holothurian pool

ncbi_organism_name: Marinospirillum perlucidum

ncbi_refseq_category: reference genome

ncbi_submitter: Shandong University


ncbi_organism_name: Bacteroidota bacterium

ncbi_submitter: Helmholtz Centre for Environmental Research - UFZ

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;x__Bacteroidota/Chlorobiota group;p__Bacteroidota;x__unclassified Bacteroidota;s__Bacteroidota bacterium


ncbi_organism_name: Candidatus Fervidifonticultor sextus

ncbi_submitter: Sun Yat-Sen University

ncbi_taxonomy: d__Bacteria;p__Candidatus Sysuimicrobiota;c__Candidatus Sysuimicrobiia;o__Candidatus Sysuimicrobiales;f__Candidatus Humicultoraceae;g__Candidatus Fervidifonticultor;s__Candidatus Fervidifonticultor sextus

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Candidatus Sysuimicrobiota;c__Candidatus Sysuimicrobiia;o__Candidatus Sysuimicrobiales;f__Candidatus Humicultoraceae;g__Candidatus Fervidifonticultor;s__Candidatus Fervidifonticultor sextus


ncbi_country: Viet Nam: Hanoi

ncbi_isolation_source: pus

ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: National Institute of Infectious Diseases


ncbi_country: China: Hangzhou

ncbi_submitter: Sir Run Run Shaw Hospital, Zhejiang University School of Medicine


ncbi_organism_name: Acidimicrobiales bacterium

ncbi_submitter: Tang lab


ncbi_assembly_name: freshwater MAG --- MJ110927B_bin-045

ncbi_isolation_source: lake water

ncbi_organism_name: uncultured beta proteobacterium

ncbi_submitter: BILS


ncbi_country: Peru

ncbi_organism_name: Mycobacterium tuberculosis

ncbi_submitter: SC


ncbi_country: Russia: Moscow

ncbi_isolation_source: urine

ncbi_submitter: SRCAMB


ncbi_country: United Kingdom

ncbi_organism_name: Enterobacter hormaechei


ncbi_organism_name: Prevotella sp.

ncbi_submitter: Agriculture and Agri-Food Canada


ncbi_organism_name: Christensenellales bacterium


ncbi_country: Malaysia

ncbi_organism_name: Mitsuokella jalaludinii DSM 13811

ncbi_submitter: DOE Joint Genome Institute


ncbi_country: China

ncbi_isolation_source: food

ncbi_organism_name: Cronobacter sakazakii

ncbi_submitter: Guangdong Institute of Microbiology, Guangzhou city, China


ncbi_isolation_source: surface swab

ncbi_organism_name: Stenotrophomonas sp. GD04032

ncbi_submitter: Washington University in St. Louis School of Medicine


ncbi_isolation_source: human feces metagenome

ncbi_organism_name: uncultured Lentisphaeria bacterium

ncbi_submitter: EMG

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__PVC group;p__Lentisphaerota;c__Lentisphaeria;x__environmental samples;s__uncultured Lentisphaeria bacterium


ncbi_isolation_source: nasopharynx

ncbi_organism_name: Streptococcus pneumoniae


ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured Duncaniella sp.

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_isolation_source: Nasophaynx


ncbi_organism_name: Escherichia coli

ncbi_submitter: Zhejiang Agriculture and Forestry University


ncbi_organism_name: Desulfovibrio sp.

ncbi_submitter: Helmholtz Centre for Infection Research


ncbi_organism_name: Bacteroidales bacterium

ncbi_submitter: XINJIANG INSTITUTE OF ECOLOGY AND GEOGRAPHY


ncbi_assembly_name: freshwater MAG --- ErkenSummer_bin-2066

ncbi_organism_name: uncultured Bacteroidota bacterium

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;x__Bacteroidota/Chlorobiota group;p__Bacteroidota;x__environmental samples;s__uncultured Bacteroidota bacterium


ncbi_isolation_source: metagenome

ncbi_organism_name: Rosenbergiella nectarea

ncbi_submitter: European Bioinformatics Institute


ncbi_isolation_source: chicken gut metagenome

ncbi_organism_name: uncultured Bacillales bacterium

ncbi_submitter: UNIVERSITY OF COPENHAGEN


ncbi_assembly_level: Chromosome

ncbi_assembly_name: IMG-taxon 2623620567 annotated assembly

ncbi_organism_name: Micromonospora echinofusca

ncbi_submitter: DOE - JOINT GENOME INSTITUTE


ncbi_country: Belgium: Namur

ncbi_isolation_source: Testicle

ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: Cliniques Universitaires Saint-Luc


ncbi_isolation_source: human skin

ncbi_organism_name: uncultured Porphyromonas sp.

ncbi_submitter: NIH/NHGRI


ncbi_organism_name: uncultured Actinomyces sp.


ncbi_organism_name: Parabacteroides distasonis


ncbi_country: Slovenia: River Sava

ncbi_isolation_source: Sava Riverbank; Slovenia

ncbi_organism_name: Bacillus subtilis

ncbi_submitter: University of Ljubljana, Biotechnical faculty


ncbi_country: China: Dashan; Guangxi Province

ncbi_isolation_source: acid mine drainage sediment

ncbi_organism_name: Gammaproteobacteria bacterium

ncbi_submitter: South china normal university


ncbi_country: Australia: Perth

ncbi_organism_name: Helicobacter pylori

ncbi_submitter: University of Western Australia


ncbi_submitter: UNIVERSITY HOSPITAL TUEBINGEN


ncbi_submitter: SC


ncbi_organism_name: Cyanobacteriota bacterium

ncbi_submitter: Israel Oceanographic and Limnological Research


ncbi_isolate: Sphingomonadales sp. RBC054

ncbi_isolation_source: wastewater biofilm

ncbi_organism_name: uncultured Sphingomonadales bacterium

ncbi_strain_identifiers: Sphingomonadales sp. RBC054

ncbi_submitter: UNIVERSITY OF WATERLOO


ncbi_country: China: Wuyi Polymetallic Mine; Guangxi Province

ncbi_organism_name: Bacteroidota bacterium

ncbi_submitter: Sun Yat-sen University, Guangzhou


ncbi_country: China: Xiabancheng town; Chengde city; Hebei province

ncbi_isolation_source: cellar mud pit (Jiaochi in Chinese)

ncbi_organism_name: Caproicibacterium sp. BJN0003

ncbi_submitter: Beijing Technology and Business University


ncbi_organism_name: uncultured Muribaculaceae bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_isolation_source: human saliva metagenome

ncbi_organism_name: uncultured Catonella sp.

ncbi_submitter: Antimicrobial Resistance Research Center, National Institute of Infectious Diseases


ncbi_organism_name: Acinetobacter variabilis

ncbi_submitter: Helmholtz Centre for Environmental Research - UFZ


ncbi_country: India: Wyanad Meppadi

ncbi_isolation_source: leaves

ncbi_organism_name: Ralstonia pseudosolanacearum CaRs-Mep

ncbi_strain_identifiers: CaRs-Mep

ncbi_submitter: ICAR

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Ralstonia;x__Ralstonia solanacearum species complex;s__Ralstonia pseudosolanacearum;x__Ralstonia pseudosolanacearum CaRs-Mep


ncbi_isolation_source: sheep gut metagenome

ncbi_organism_name: uncultured Bacteroidales bacterium

ncbi_submitter: EMG

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;x__Bacteroidota/Chlorobiota group;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;x__environmental samples;s__uncultured Bacteroidales bacterium


ncbi_country: Brazil: Dourados

ncbi_isolation_source: feces

ncbi_submitter: LNCC


ncbi_organism_name: Lachnospiraceae bacterium

ncbi_submitter: University of Queensland


ncbi_organism_name: Streptococcus salivarius


ncbi_organism_name: Kineosporiaceae bacterium

ncbi_submitter: Zhejiang University


ncbi_organism_name: uncultured Alistipes sp.


ncbi_country: USA: Pennsylvania; Centralia

ncbi_isolation_source: soil

ncbi_organism_name: Armatimonadota bacterium

ncbi_submitter: Michigan State University


ncbi_organism_name: uncultured bacterium


ncbi_organism_name: Blastocatellia bacterium

ncbi_submitter: Nanjing University


ncbi_isolation_source: mouse gut metagenome

ncbi_organism_name: uncultured Bacillota bacterium

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;x__environmental samples;s__uncultured Bacillota bacterium


ncbi_organism_name: Pantoea agglomerans

ncbi_submitter: University of Georgia


ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: Instituto de Pesquisa Pele Pequeno Principe


ncbi_organism_name: Bacillus pacificus

ncbi_submitter: Swedish University of Agricultural Sciences


ncbi_organism_name: Fidelibacterota bacterium

ncbi_submitter: WELLCOME SANGER INSTITUTE


ncbi_organism_name: Pseudohongiellaceae bacterium

ncbi_submitter: University of Southern California


ncbi_organism_name: Bacteroidales bacterium


ncbi_organism_name: Saprospiraceae bacterium

ncbi_submitter: Iowa State University


ncbi_organism_name: Ruthenibacterium lactatiformans

ncbi_submitter: Washington University in Saint Louis


ncbi_organism_name: Acetobacteraceae bacterium


ncbi_organism_name: Raoultella ornithinolytica

ncbi_submitter: Zhengzhou University


ncbi_organism_name: Barnesiella intestinihominis

ncbi_submitter: Federal Research and Clinical Centre of Physical-Chemical Medicine


ncbi_country: Czech Republic: Rimov Reservoir

ncbi_isolation_source: freshwater

ncbi_organism_name: Actinomycetota bacterium

ncbi_submitter: Institute of Hydrobiology, Department of Aquatic Microbial Ecology, Biology Centre, CAS


ncbi_country: Tanzania: Lake Tanganyika; Mahale

ncbi_isolation_source: freshwater lake

ncbi_organism_name: Chloroflexota bacterium

ncbi_submitter: University of Wisconsin - Madison


ncbi_organism_name: Bacillota bacterium

ncbi_submitter: CLUE-TERRA


ncbi_isolation_source: marine metagenome

ncbi_organism_name: uncultured Fidelibacterota bacterium

ncbi_submitter: EMG

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;p__Fidelibacterota;x__environmental samples;s__uncultured Fidelibacterota bacterium


ncbi_submitter: Center for Microbial Communities


ncbi_organism_name: Acinetobacter baumannii

ncbi_submitter: University of Birmingham


ncbi_country: Russia: Sakhalin; Daginskiye Thermal Springs

ncbi_isolation_source: enrichment culture from terrestrial mud volcano

ncbi_organism_name: Armatimonadota bacterium

ncbi_submitter: Research Center of Biotechnology RAS


ncbi_isolation_source: Faeces

ncbi_organism_name: Bacteroides acidifaciens

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_isolation_source: fish gut metagenome

ncbi_organism_name: uncultured Hyphomicrobium sp.


ncbi_organism_name: uncultured Pseudomonas sp.


ncbi_assembly_name: freshwater MAG --- Loc090519-5m_bin-0419

ncbi_isolation_source: lake water

ncbi_organism_name: uncultured beta proteobacterium

ncbi_submitter: BILS


ncbi_organism_name: uncultured Angelakisella sp.

ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_country: Colombia: Cali

ncbi_organism_name: Bacillus tropicus

ncbi_strain_identifiers: INS 041

ncbi_submitter: Instituto Nacional de Salud


ncbi_organism_name: Aphanothece sp.

ncbi_submitter: Stockholm University


ncbi_country: Italy: Florence

ncbi_isolation_source: bronchoaspiration material

ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: University of Trento


ncbi_country: China: Guangdong

ncbi_organism_name: Mycoplasmopsis anatis

ncbi_submitter: WENS Foodstuff Group Co., Ltd. Rsearch Institute


ncbi_isolation_source: metagenome

ncbi_organism_name: uncultured Lachnospiraceae bacterium

ncbi_submitter: addis ababa university


ncbi_country: Canada: Alberta

ncbi_isolation_source: groundwater

ncbi_organism_name: Gemmatimonadales bacterium

ncbi_submitter: University of Calgary


ncbi_organism_name: Escherichia coli

ncbi_submitter: Hangzhou Medical College


ncbi_country: South Africa

ncbi_isolation_source: oropharynx

ncbi_organism_name: Streptococcus oralis

ncbi_submitter: University of Kaiserslautern


ncbi_country: Belgium: Merelbeke

ncbi_organism_name: Curtobacterium flaccumfaciens pv. oortii

ncbi_strain_identifiers: GBBC 3345

ncbi_submitter: Institute for Agricultural, Fisheries and Food Research (ILVO)


ncbi_organism_name: uncultured Alistipes sp.


ncbi_isolation_source: nasopharynx

ncbi_organism_name: Streptococcus pneumoniae

ncbi_submitter: SC


ncbi_country: Russia: Rostov-on-Don

ncbi_isolation_source: laboratory sample

ncbi_organism_name: Vibrio parahaemolyticus

ncbi_submitter: Research Institute for Plague Control


ncbi_isolation_source: lung

ncbi_organism_name: Stenotrophomonas maltophilia


ncbi_submitter: Centre for Microbiome Research


ncbi_organism_name: Lysinibacillus fusiformis


ncbi_submitter: EMG


ncbi_country: Gambia

ncbi_isolation_source: stool

ncbi_submitter: University of Maryland, School of Medicine


ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_organism_name: Pseudolactococcus raffinolactis

ncbi_submitter: The Microflora Danica Consortium


ncbi_country: Netherlands

ncbi_isolation_source: CSF

ncbi_organism_name: Haemophilus influenzae


ncbi_isolation_source: Freshwater lake

ncbi_organism_name: Chitinophaga pinensis

ncbi_submitter: BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO


ncbi_isolation_source: hepatopancreas

ncbi_submitter: Liaocheng University


ncbi_organism_name: Flavobacteriaceae bacterium

ncbi_submitter: Helmholtz Centre for Environmental Research - UFZ


ncbi_isolation_source: Drinking water distribution network

ncbi_organism_name: Chryseobacterium fistulae

ncbi_submitter: UVEG


ncbi_organism_name: Candidatus Eiseniibacteriota bacterium

ncbi_submitter: Zhejiang University

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;p__Candidatus Eiseniibacteriota;s__Candidatus Eiseniibacteriota bacterium


ncbi_country: France

ncbi_isolation_source: feces

ncbi_submitter: Anses


ncbi_organism_name: Rhodoferax sp.

ncbi_submitter: University of Duisburg Essen


ncbi_isolation_source: ruminant gastrointestinal tract

ncbi_organism_name: Campylobacter sp.

ncbi_submitter: Nanjing Agricultural University


ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured Odoribacter sp.


ncbi_organism_name: Mycobacterium tuberculosis NCGM2209

ncbi_submitter: National Center for Global Health and Medicine


ncbi_isolation_source: marine water

ncbi_organism_name: uncultured Bacteroidota bacterium

ncbi_submitter: WOODS HOLE OCEANOGRAPHIC INSTITUTION


ncbi_isolation_source: oral swab from large female adult hippo

ncbi_organism_name: Pasteurellaceae bacterium LFhippo2

ncbi_submitter: University of Copenhagen


ncbi_submitter: TIGR

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Yersinia;x__Yersinia pseudotuberculosis complex;s__Yersinia pestis;sb__Yersinia pestis subsp. pestis;x__Yersinia pestis subsp. pestis bv. Orientalis;x__Yersinia pestis biovar Orientalis str. IP275


ncbi_country: Mexico

ncbi_organism_name: Vibrio cholerae CP1030(3)

ncbi_submitter: Institute for Genome Sciences


ncbi_organism_name: uncultured Muribaculaceae bacterium


ncbi_isolation_source: mouse gut metagenome

ncbi_organism_name: uncultured Eubacterium sp.

ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_organism_name: uncultured Lachnospiraceae bacterium


ncbi_country: Japan

ncbi_isolation_source: soil

ncbi_organism_name: Caulobacter segnis

ncbi_submitter: University of South Carolina


ncbi_country: Pacific Ocean: Western Pacific

ncbi_isolation_source: seawater

ncbi_organism_name: Flagellimonas oceanensis

ncbi_submitter: Second Institute of Oceanography, State Oceanic Administration


ncbi_isolation_source: not provided

ncbi_organism_name: uncultured Wolbachia sp.

ncbi_submitter: Centre for Integrative Biology (CIBIO), University of Trento


ncbi_isolation_source: human gut

ncbi_organism_name: uncultured Bacillota bacterium

ncbi_submitter: EMG


ncbi_country: China: Jilin

ncbi_organism_name: Mycobacterium avium

ncbi_strain_identifiers: HJW

ncbi_submitter: Jilin Agricultural University


ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_organism_name: Bacillota bacterium


ncbi_organism_name: Pseudomonas putida

ncbi_submitter: Graduate School of Regional Development and Creativity, Utsunomiya University


ncbi_organism_name: uncultured Streptococcus sp.


ncbi_organism_name: Micromonospora sp. NPDC049891

ncbi_submitter: The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology


ncbi_organism_name: Salmonella enterica

ncbi_submitter: Huzhou center for disease control and prevention


ncbi_country: Canada: Edmonton

ncbi_isolation_source: feces day 0 after weanning

ncbi_organism_name: Ruminococcus sp.

ncbi_submitter: University of Alberta


ncbi_organism_name: uncultured Peptoniphilaceae bacterium


ncbi_organism_name: uncultured Alistipes sp.


ncbi_country: Australia: Davies Reef

ncbi_organism_name: Gammaproteobacteria bacterium

ncbi_submitter: Australian Centre for Ecogenomics


ncbi_organism_name: Flavobacteriales bacterium

ncbi_submitter: East China Normal University


ncbi_country: Russia: Kulunda Steppe

ncbi_isolation_source: hypersaline soda lake sediment

ncbi_organism_name: Thiorhodovibrio sp.

ncbi_submitter: Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam


ncbi_organism_name: Ralstonia pseudosolanacearum

ncbi_submitter: NIVIP


ncbi_isolation_source: Ileo-caecum

ncbi_organism_name: Mucispirillum schaedleri


ncbi_organism_name: Listeria monocytogenes

ncbi_submitter: Oregon State University


ncbi_organism_name: Bacillus velezensis

ncbi_submitter: Pusan National University

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;x__Bacillus subtilis group;x__Bacillus amyloliquefaciens group;s__Bacillus velezensis


ncbi_organism_name: Ralstonia sp. NT80

ncbi_submitter: Genome Research Center, NODAI Research Institute, Tokyo University of Agriculture


ncbi_organism_name: Lactobacillus johnsonii

ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_isolation_source: metagenome

ncbi_organism_name: uncultured Phascolarctobacterium sp.

ncbi_submitter: addis ababa university


ncbi_country: China: Nanjing

ncbi_isolate: new MAG-216

ncbi_isolation_source: bioreactor sludge

ncbi_organism_name: Rubrivivax sp.

ncbi_strain_identifiers: new MAG-216

ncbi_submitter: Micoorganism


ncbi_country: China: Guangxi; Dashan

ncbi_isolation_source: sediment

ncbi_organism_name: Thiomonas sp.

ncbi_submitter: an eLibrary of Microbial Systematics and Genomics

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Betaproteobacteria;o__Burkholderiales;x__Burkholderiales genera incertae sedis;g__Thiomonas;x__unclassified Thiomonas;s__Thiomonas sp.


ncbi_country: Malaysia: Selangor

ncbi_organism_name: Kitasatospora sp. SUK 42

ncbi_strain_identifiers: SUK 42

ncbi_submitter: National University of Malaysia


ncbi_organism_name: Chloroflexota bacterium

ncbi_submitter: Zhejiang University


ncbi_organism_name: uncultured Lachnospiraceae bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_country: Southern Ocean

ncbi_isolation_source: ground

ncbi_organism_name: Rhodococcus erythropolis

ncbi_strain_identifiers: IEGM 1399

ncbi_submitter: INSTITUTE OF ECOLOGY AND GENETICS OF MICROORGANISMS, URAL BRANCH OF THE RUSSIAN ACADEMY OF SCIENCES


ncbi_country: USA: Texas

ncbi_isolation_source: Endocarditis

ncbi_organism_name: Streptococcus intermedius

ncbi_submitter: The University of Texas at Dallas


ncbi_country: India: Tamil Nadu

ncbi_isolation_source: stool

ncbi_organism_name: Solobacterium sp.

ncbi_submitter: SAHMRI


ncbi_organism_name: Paracoccaceae bacterium

ncbi_submitter: Xiamen University


ncbi_organism_name: Bacillus sp. FSL K6-1012

ncbi_submitter: Penn State

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;x__unclassified Bacillus (in: firmicutes);s__Bacillus sp. FSL K6-1012


ncbi_country: Switzerland: Zurich

ncbi_isolation_source: joint of pelvis

ncbi_organism_name: Cutibacterium avidum

ncbi_submitter: University of California, Los Angeles


ncbi_organism_name: Bacteroidales bacterium

ncbi_submitter: CLUE-TERRA


ncbi_country: China: Shandong

ncbi_organism_name: Escherichia coli

ncbi_submitter: China Aricultural University


ncbi_country: Norway

ncbi_isolation_source: FRDC_Fjaler soil; pH 3.7

ncbi_organism_name: Rhodanobacter sp. C03

ncbi_submitter: Norwegian University of Life Sciences (NMBU)


ncbi_country: China: Zhangshu City; Jiangxi Province

ncbi_submitter: South China Agricultural University


ncbi_isolation_source: unknown

ncbi_organism_name: uncultured Pantoea sp.

ncbi_submitter: ROTHAMSTED RESEARCH


ncbi_organism_name: Christensenellales bacterium

ncbi_submitter: Federal Research and Clinical Centre of Physical-Chemical Medicine


ncbi_organism_name: Thermodesulfobacteriota bacterium

ncbi_submitter: Monash University


ncbi_organism_name: Hominenteromicrobium sp.


ncbi_organism_name: Bryobacterales bacterium

ncbi_submitter: Center for Microbial Communities


ncbi_organism_name: Enterococcus faecium

ncbi_submitter: University of Bern


ncbi_organism_name: Hyphomonas sp.

ncbi_submitter: The University of Texas at Austin


ncbi_submitter: UMR PIMIT - Processus infectieux en milieu insulaire tropical


ncbi_organism_name: Xanthomonas euvesicatoria pv. euvesicatoria

ncbi_submitter: Kasetsart University


ncbi_isolate: aBcum

ncbi_organism_name: Arsenophonus apicola

ncbi_strain_identifiers: aBcum

ncbi_submitter: University of Liverpool


ncbi_organism_name: Prevotella sp.


ncbi_organism_name: Candidatus Azotimanducaceae bacterium

ncbi_submitter: German Federation for Biological Data


ncbi_organism_name: uncultured Acidobacteriota bacterium

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Acidobacteriota;x__environmental samples;s__uncultured Acidobacteriota bacterium


ncbi_organism_name: Streptomyces griseorubiginosus

ncbi_submitter: The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology


ncbi_submitter: University of Chinese Academy of Sciences

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;p__Candidatus Absconditibacteriota;o__Candidatus Absconditabacterales;x__unclassified Candidatus Absconditabacterales;s__Candidatus Absconditabacterales bacterium


ncbi_organism_name: Mycobacterium sp.

ncbi_submitter: University of Fribourg


ncbi_organism_name: Sutterella wadsworthensis


ncbi_organism_name: Enterococcus faecalis

ncbi_submitter: The British University in Egypt


ncbi_organism_name: uncultured Chromatiales bacterium

ncbi_submitter: Centre for Microbiome Research


ncbi_organism_name: Klebsiella aerogenes

ncbi_submitter: University of Wisconsin-Madison


ncbi_country: Hungary: Szeged biogas plant

ncbi_isolation_source: Anaerobic sludge from Szeged Biogas Plant

ncbi_organism_name: Bacillota bacterium

ncbi_submitter: University of Szeged


ncbi_organism_name: Pseudomonadota bacterium

ncbi_submitter: GEOMAR Helmholtz Centre for Ocean Research


ncbi_assembly_name: freshwater MAG --- Loclat_bin-05004

ncbi_isolation_source: lake water

ncbi_organism_name: uncultured Pseudomonadota bacterium

ncbi_submitter: BILS

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;x__environmental samples;s__uncultured Pseudomonadota bacterium


ncbi_country: Japan: Okinawa Trough; Pacific Ocean

ncbi_isolation_source: hydrothermal vent sediment

ncbi_organism_name: Actinomycetes bacterium

ncbi_submitter: Institute of Oceanology, Chinese Academy of Sciences


ncbi_isolation_source: Colon

ncbi_organism_name: uncultured Clostridia bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Clostridia;x__environmental samples;s__uncultured Clostridia bacterium


ncbi_organism_name: Escherichia coli

ncbi_submitter: University of Sheffield


ncbi_organism_name: Jeotgalibaca sp. A122

ncbi_submitter: China CDC


ncbi_organism_name: Coprobacter fastidiosus

ncbi_submitter: Federal Research and Clinical Centre of Physical-Chemical Medicine


ncbi_country: China: Qinghai

ncbi_isolation_source: sediments

ncbi_organism_name: SAR324 cluster bacterium

ncbi_submitter: Institute of Geology and Geophysics, Chinese Academy of Sciences

ncbi_taxonomy_unfiltered: d__Bacteria;x__delta/epsilon subdivisions;c__Deltaproteobacteria;x__Deltaproteobacteria incertae sedis;x__SAR324 cluster;s__SAR324 cluster bacterium


ncbi_country: China: Guangzhou

ncbi_isolation_source: soil

ncbi_organism_name: Betaproteobacteria bacterium SCN2

ncbi_submitter: South China University of Technology (SCUT)


ncbi_country: USA: New York

ncbi_isolation_source: fecal sample

ncbi_organism_name: Bifidobacterium adolescentis

ncbi_submitter: University of Chicago


ncbi_submitter: Helmholtz Centre for Infection Research


ncbi_isolation_source: human gut

ncbi_organism_name: uncultured Oscillospiraceae bacterium

ncbi_submitter: EMG


ncbi_country: Japan

ncbi_isolation_source: feces

ncbi_organism_name: Roseburia sp.

ncbi_submitter: Yonsei University


ncbi_organism_name: Atlantibacter hermannii


ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: University of Pretoria


ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured Muribaculaceae bacterium


ncbi_organism_name: Gallionella sp.

ncbi_submitter: University of Waterloo


ncbi_country: Spain

ncbi_isolation_source: joint

ncbi_organism_name: Streptococcus suis

ncbi_submitter: National Institute for Communicable Disease Control and Prevention


ncbi_isolation_source: respiratory

ncbi_organism_name: Enterobacter hormaechei

ncbi_submitter: NYU Grossman School of Medicine


ncbi_country: Chile: San Felipe; Valparaiso

ncbi_isolation_source: nasal from older adult

ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: Universidad de Valparaiso


ncbi_assembly_name: Rumen uncultured genome RUG14661

ncbi_isolation_source: cattle rumen

ncbi_organism_name: uncultured Bacteroidales bacterium

ncbi_submitter: THE ROSLIN INSTITUTE


ncbi_isolation_source: Rectal swab

ncbi_organism_name: Enterococcus faecium

ncbi_submitter: Geogentics


ncbi_country: France

ncbi_organism_name: Escherichia coli

ncbi_submitter: Microbiology, Graduate School of Medical Sciences, Kyushu University


ncbi_country: Czech Republic: Brno

ncbi_isolation_source: wound swab

ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: Charles University in Prague


ncbi_country: USA: Seattle

ncbi_isolation_source: wound right preskin

ncbi_organism_name: Cutibacterium avidum

ncbi_submitter: University of Washington


ncbi_country: Ghana:Kassena Nankana District

ncbi_isolation_source: pharynx

ncbi_organism_name: Neisseria meningitidis

ncbi_submitter: SC


ncbi_submitter: LNCC

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Typhi


ncbi_country: United Kingdom

ncbi_isolation_source: Human


ncbi_organism_name: Citrobacter freundii

ncbi_submitter: CHU Bicetre


ncbi_country: Argentina

ncbi_organism_name: Clostridium botulinum

ncbi_submitter: Northern Arizona University


gtdb_type_species_of_genus: t

ncbi_assembly_name: IMG-taxon 2630968301 annotated assembly

ncbi_organism_name: Gardnerella vaginalis

ncbi_submitter: DOE - JOINT GENOME INSTITUTE


ncbi_organism_name: Streptomyces sp. NPDC007189

ncbi_submitter: The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology


ncbi_country: China: Ningxia; Yinchuan

ncbi_submitter: The Second Affiliated Hospital of Soochow University

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Enterobacter;x__Enterobacter cloacae complex;s__Enterobacter hormaechei;sb__Enterobacter hormaechei subsp. xiangfangensis


ncbi_country: USA: Irvine; CA

ncbi_isolation_source: Nares

ncbi_organism_name: Staphylococcus aureus T66632

ncbi_submitter: Broad Institute


ncbi_organism_name: Caldilineaceae bacterium

ncbi_submitter: The University of Hong Kong


ncbi_isolation_source: chicken gut metagenome

ncbi_organism_name: uncultured Clostridium sp.

ncbi_submitter: UNIVERSITY OF COPENHAGEN


ncbi_organism_name: Pseudolabrys sp.

ncbi_submitter: The Microflora Danica Consortium


ncbi_organism_name: uncultured Muribaculaceae bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_organism_name: Intestinibacter bartlettii

ncbi_submitter: EMG


ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: Hospital Universitario Ramon y Cajal (IRYCIS)


ncbi_country: China: Hunan

ncbi_isolation_source: anal swab

ncbi_organism_name: Campylobacter coli

ncbi_submitter: Zhejiang Academy of Agricultural Sciences


ncbi_isolation_source: chicken caecal content

ncbi_submitter: Institut National pour la Recherche Agronomique (FRANCE)

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;x__Cyanobacteriota/Melainabacteria group;p__Candidatus Melainabacteria;o__Candidatus Gastranaerophilales;x__unclassified Candidatus Gastranaerophilales;s__Candidatus Gastranaerophilales bacterium


ncbi_submitter: The First Affiliated Hospital, Zhejiang University School of Medicine


ncbi_organism_name: Enterococcus faecalis

ncbi_submitter: The Second Affiliated Hospital of Zhejiang University School of Medicine, Zhejiang University


ncbi_country: China: Hangzhou

ncbi_isolation_source: blood

ncbi_submitter: Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University


ncbi_country: USA: Texas Panhandle

ncbi_organism_name: Aeromonas veronii

ncbi_submitter: Texas Tech University


ncbi_country: USA: Brookings; South Dakota State University

ncbi_organism_name: Segatella hominis

ncbi_submitter: South Dakota State University


ncbi_country: China: Jiangsu

ncbi_organism_name: Escherichia coli

ncbi_submitter: China Agricultural University


ncbi_organism_name: Streptococcus agalactiae

ncbi_submitter: Universidad Autonoma de Nuevo Leon


ncbi_isolation_source: Culture Collection

ncbi_organism_name: Bacillus cereus

ncbi_submitter: AARHUS UNIVERSITY, DEPARTMENT OF FOOD SCIENCE


ncbi_assembly_name: freshwater MAG --- C24_bin-1864

ncbi_isolation_source: pond

ncbi_organism_name: Candidatus Adlerbacteria bacterium

ncbi_submitter: BILS

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;x__Patescibacteria group;x__Parcubacteria group;p__Candidatus Adleribacteriota;x__unclassified Candidatus Adlerbacteria;s__Candidatus Adlerbacteria bacterium


ncbi_isolation_source: mouse gut metagenome

ncbi_organism_name: Mucispirillum schaedleri ASF457

ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_country: Germany

ncbi_isolation_source: rectal swab

ncbi_organism_name: Acinetobacter baumannii

ncbi_submitter: Universitaetsklinikum Freiburg


ncbi_country: USA

ncbi_submitter: Duke University


ncbi_country: USA: Pittsburgh; Pennsylvania

ncbi_isolation_source: wound

ncbi_organism_name: Proteus penneri

ncbi_submitter: University of Pittsburgh


ncbi_organism_name: Streptococcus suis A7

ncbi_submitter: Huazhong Agricultural University


ncbi_country: Russia

ncbi_isolation_source: clinical sample

ncbi_submitter: University of Tartu


ncbi_organism_name: Serratia marcescens

ncbi_submitter: Cardiff University School of Medicine


ncbi_isolation_source: Throat

ncbi_organism_name: Streptococcus pyogenes

ncbi_submitter: SC


ncbi_submitter: Walter Reed Army Institute of Research


ncbi_country: China: Shijiazhuang

ncbi_submitter: The Fourth Hospital of Hebei Medical University


ncbi_organism_name: Salmonella enterica

ncbi_submitter: Jiangxi Province Center for Disease Control and Prevention


ncbi_organism_name: Candidatus Phytoplasma stylosanthis

ncbi_submitter: Agriculture Victoria

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Mycoplasmatota;c__Mollicutes;o__Acholeplasmatales;f__Acholeplasmataceae;g__Candidatus Phytoplasma;x__16SrVIII (Loofah witches'-broom group);s__Candidatus Phytoplasma stylosanthis


ncbi_submitter: University of Manchester


ncbi_country: China: Heilongjiang

ncbi_isolation_source: soil

ncbi_organism_name: Trinickia diaoshuihuensis

ncbi_submitter: School of life science


ncbi_isolation_source: sputum

ncbi_organism_name: Burkholderia ambifaria

ncbi_submitter: University of Michigan


ncbi_organism_name: uncultured Alistipes sp.

ncbi_submitter: EMG


ncbi_organism_name: Campylobacter upsaliensis

ncbi_submitter: Chinese Center for Disease Control and Prevention


ncbi_organism_name: Ralstonia pseudosolanacearum

ncbi_strain_identifiers: Lallmahomed 16

ncbi_submitter: Wageningen Plant Research


ncbi_organism_name: Mycobacteriales bacterium

ncbi_submitter: Center for Nuclear Energy in Agriculture - University of Sao Paulo


ncbi_country: Hungary: Pecs

ncbi_organism_name: Shigella sonnei

ncbi_submitter: University of Pecs


ncbi_country: Denmark

ncbi_isolation_source: trachea

ncbi_organism_name: Gallibacterium anatis

ncbi_submitter: University of Copenhagen


ncbi_country: Brazil

ncbi_isolation_source: feces

ncbi_organism_name: Campylobacter jejuni subsp. jejuni

ncbi_submitter: FDA/CFSAN


ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured Muribaculaceae bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: the seqafrica consortium


ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;x__Bacteroidota/Chlorobiota group;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;x__unclassified Muribaculaceae;s__Muribaculaceae bacterium Isolate-043 (Harlan)


ncbi_country: Germany: Braunschweig

ncbi_organism_name: Streptococcus lutetiensis

ncbi_submitter: US Food and Drug Administration


ncbi_organism_name: Cytobacillus firmus NBRC 15306

ncbi_submitter: National Institute of Technology and Evaluation

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Cytobacillus;s__Cytobacillus firmus;x__Cytobacillus firmus NBRC 15306


ncbi_organism_name: Aeromonas dhakensis

ncbi_submitter: University of Connecticut Graf Lab


ncbi_isolation_source: Caecum

ncbi_organism_name: uncultured Oscillospiraceae bacterium


ncbi_isolation_source: nasopharynx

ncbi_organism_name: Streptococcus pneumoniae

ncbi_submitter: SC


ncbi_country: Poland: Koszalin

ncbi_organism_name: Streptococcus sp. 53

ncbi_submitter: National Medicines Institute


ncbi_organism_name: Borreliella garinii

ncbi_submitter: S. Gallicano Institute, IRCCS


ncbi_country: USA: Guaymas Basin

ncbi_isolation_source: Guaymas Basin Hydrothermal plume metagenome

ncbi_organism_name: Gammaproteobacteria bacterium

ncbi_submitter: University of Wisconsin-Madison


ncbi_organism_name: Neglectibacter sp. 59


ncbi_country: Tanzania: MARA

ncbi_isolation_source: stool

ncbi_organism_name: Vibrio cholerae

ncbi_submitter: Univ. of Maryland


ncbi_isolation_source: metagenome

ncbi_organism_name: uncultured Magnetospirillum sp.

ncbi_submitter: European Bioinformatics Institute


ncbi_country: China: Sichuan; Dujiangyan; Xiange

ncbi_organism_name: Pseudomonas syringae pv. actinidiae

ncbi_submitter: Novogene

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;x__Pseudomonas syringae group;x__Pseudomonas syringae group genomosp. 1;s__Pseudomonas syringae;x__Pseudomonas syringae group pathovars incertae sedis;x__Pseudomonas syringae pv. actinidiae


ncbi_country: Spain: Mallorca

ncbi_isolation_source: blood

ncbi_submitter: University of Balearic Islands


ncbi_organism_name: Pasteurella multocida

ncbi_submitter: Universidad Complutense de Madrid


ncbi_country: France

ncbi_isolation_source: root nodule

ncbi_organism_name: Rhizobium leguminosarum bv. viciae

ncbi_submitter: IRD


ncbi_country: South Africa: Bushbuckridge; Mpumalanga

ncbi_organism_name: Christensenellaceae bacterium

ncbi_submitter: Stanford University School of Medicine


ncbi_country: USA: Texas;Huntsville

ncbi_isolation_source: soil adjacent to human cadaver hip

ncbi_organism_name: Candidatus Elarobacter sp.

ncbi_submitter: Colorado State University


ncbi_country: Iran: Karaj

ncbi_isolation_source: rumen

ncbi_organism_name: Treponema sp.

ncbi_submitter: Baqiyatallah University of Medical Sciences


ncbi_isolation_source: mouse gut metagenome

ncbi_organism_name: uncultured Lachnospiraceae bacterium

ncbi_submitter: National Key Laboratory of Agricultural Microbiology


ncbi_organism_name: Xanthobacteraceae bacterium

ncbi_submitter: Zhejiang University


ncbi_organism_name: Bacteroides acidifaciens

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_country: China: Tengchong

ncbi_isolation_source: hot spring

ncbi_submitter: Key Laboratory of Genome Science and Information, Beijing Institute of Genomics, Chinese Academy of Sciences

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Bacilli;o__Bacillales;f__Alicyclobacillaceae;g__Alicyclobacillus;s__Alicyclobacillus acidocaldarius;sb__Alicyclobacillus acidocaldarius subsp. acidocaldarius;x__Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1


ncbi_organism_name: Streptomyces sp. Alain-F2R5

ncbi_submitter: UAE University


ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: Sir Run Run Shaw Hospital, School of Medicine, Zhejiang University


ncbi_isolation_source: ruminant gastrointestinal tract

ncbi_organism_name: Bacteroidales bacterium

ncbi_submitter: Nanjing Agricultural University


ncbi_isolation_source: lake water

ncbi_organism_name: Burkholderiaceae bacterium

ncbi_submitter: biology centre of the czech academy of sciences, institute of hydrobiology


ncbi_organism_name: uncultured bacterium

ncbi_submitter: addis ababa university


ncbi_isolation_source: human gut

ncbi_submitter: UNIVERSITY OF NEW SOUTH WALES


ncbi_organism_name: Erythrobacter sanguineus

ncbi_submitter: Biology Centre CAS


ncbi_organism_name: Streptomyces abikoensis

ncbi_submitter: The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology


ncbi_organism_name: uncultured Flavobacteriales bacterium

ncbi_submitter: Centre for Microbiome Research

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;x__Bacteroidota/Chlorobiota group;p__Bacteroidota;c__Flavobacteriia;o__Flavobacteriales;x__environmental samples;s__uncultured Flavobacteriales bacterium


ncbi_organism_name: Solirubrobacterales bacterium

ncbi_submitter: University of California Davis


ncbi_organism_name: Acidaminococcus intestini

ncbi_submitter: Federal Research and Clinical Centre of Physical-Chemical Medicine


ncbi_organism_name: Serratia bockelmannii

ncbi_submitter: McMaster University


ncbi_organism_name: Serratia marcescens

ncbi_submitter: University of Antwerp


ncbi_organism_name: Salmonella sp. NW49

ncbi_submitter: Sichuan University


ncbi_organism_name: Escherichia coli

ncbi_submitter: Hopital Robert Debre, APHP - Universite Paris Cite, IAME, INSERM, Paris, France


ncbi_organism_name: Acutalibacteraceae bacterium


ncbi_organism_name: Streptomyces sp. NPDC101206


ncbi_organism_name: Mycobacterium sp.

ncbi_submitter: The University of Texas at Austin


ncbi_organism_name: Corynebacterium evansiae

ncbi_submitter: Toho university


ncbi_organism_name: Acinetobacter baumannii

ncbi_submitter: ANSES


ncbi_organism_name: Acidobacteriota bacterium

ncbi_submitter: Stockholm University


ncbi_country: Malaysia: Sungkai; Perak

ncbi_isolation_source: brown biofilm from alkaline hot spring

ncbi_submitter: Universiti Teknologi Malaysia


ncbi_submitter: Center for Microbial Communities


ncbi_organism_name: Salmonella enterica subsp. enterica

ncbi_submitter: KEMRI


ncbi_organism_name: Gammaproteobacteria bacterium

ncbi_submitter: Institut de Ciencies del Mar


ncbi_country: China: Shandong

ncbi_organism_name: Vibrio fluvialis

ncbi_submitter: South China Agricultural University


ncbi_country: South Korea:Iksan

ncbi_isolation_source: Doenjang

ncbi_organism_name: Bacillus amyloliquefaciens

ncbi_submitter: Microbial Institute for Fermentation Industry

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;x__Bacillus subtilis group;x__Bacillus amyloliquefaciens group;s__Bacillus amyloliquefaciens


ncbi_isolation_source: sour milk

ncbi_organism_name: Lactococcus lactis subsp. lactis

ncbi_submitter: university of ljubljana, biotechnical faculty


ncbi_country: China: Shenzhen

ncbi_isolation_source: Patient5 sputum

ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: Shenzhen People Hospital


ncbi_organism_name: uncultured Saprospirales bacterium

ncbi_submitter: EMG

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;x__Bacteroidota/Chlorobiota group;p__Bacteroidota;c__Saprospiria;o__Saprospirales;x__environmental samples;s__uncultured Saprospirales bacterium


ncbi_country: Botswana

ncbi_isolation_source: nasal swab from healthy carrier

ncbi_organism_name: Staphylococcus pseudintermedius

ncbi_submitter: University of Tennessee


ncbi_assembly_name: IMG-taxon 2622736590 annotated assembly

ncbi_organism_name: Desulfomicrobium apsheronum

ncbi_submitter: DOE - JOINT GENOME INSTITUTE


ncbi_country: Brazil

ncbi_organism_name: Pseudomonas coronafaciens pv. garcae

ncbi_strain_identifiers: ICMP 4323

ncbi_submitter: University of Toronto

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;x__Pseudomonas syringae group;s__Pseudomonas coronafaciens;x__Pseudomonas coronafaciens pv. garcae


ncbi_organism_name: Streptomyces sp. AK08-01A

ncbi_submitter: Oregon State University


ncbi_country: China

ncbi_organism_name: Elizabethkingia meningoseptica

ncbi_submitter: The Hong Kong Polytechnic University


ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured Muribaculaceae bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_organism_name: uncultured Lachnospiraceae bacterium


ncbi_country: Saudi Arabia: Jeddah

ncbi_isolation_source: desert soil

ncbi_organism_name: Streptomyces jeddahensis

ncbi_submitter: Goettingen Genomics Laboratory


ncbi_country: Cambodia

ncbi_organism_name: Salmonella enterica subsp. enterica serovar Typhi

ncbi_submitter: SC


ncbi_organism_name: Christensenellaceae bacterium


ncbi_isolation_source: xylene contaminated groundwater

ncbi_organism_name: Azovibrio restrictus

ncbi_submitter: Duisburg-Essen University


ncbi_organism_name: Porphyromonadaceae bacterium UBA7088

ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_country: USA

ncbi_isolation_source: BLOOD

ncbi_organism_name: Streptococcus pneumoniae


ncbi_country: Ireland

ncbi_isolation_source: post continuous fermentation

ncbi_organism_name: Eggerthella lenta

ncbi_submitter: University College Cork


ncbi_organism_name: Methylophilaceae bacterium

ncbi_submitter: Australian Centre for Ecogenomics


ncbi_organism_name: Tateyamaria sp.

ncbi_submitter: University of Southern California


ncbi_assembly_name: Campylobacter jejuni CVM 41975 v1.0

ncbi_isolation_source: clinical

ncbi_organism_name: Campylobacter jejuni CVM 41975

ncbi_submitter: FDA/CVM


ncbi_organism_name: uncultured Nitrospira sp.

ncbi_submitter: European Institute of the Sea (IUEM) - France


ncbi_isolation_source: soil

ncbi_organism_name: Streptomyces thermodiastaticus

ncbi_submitter: University of Tuebingen


ncbi_organism_name: Neisseria gonorrhoeae

ncbi_submitter: Toho university


ncbi_isolation_source: chicken caecal content

ncbi_organism_name: uncultured Ruthenibacterium sp.

ncbi_submitter: Institut National pour la Recherche Agronomique (FRANCE)


ncbi_organism_name: Pseudomonas sp. PDM19

ncbi_submitter: University of Chicago


ncbi_country: Canada: Lacombe

ncbi_isolation_source: feces

ncbi_organism_name: Flavonifractor plautii

ncbi_submitter: AAFC


ncbi_organism_name: uncultured Lachnospiraceae bacterium


ncbi_organism_name: Acutalibacter muris


ncbi_country: USA: Georgia

ncbi_isolation_source: Imported Fresh Produce 17

ncbi_organism_name: Serratia liquefaciens

ncbi_submitter: University of Wyoming


ncbi_assembly_name: IMG-taxon 2616644941 annotated assembly

ncbi_organism_name: Streptomyces atratus

ncbi_submitter: DOE - JOINT GENOME INSTITUTE


ncbi_country: USA: Florida

ncbi_isolation_source: dental plaque

ncbi_organism_name: Streptococcus intermedius

ncbi_submitter: Clemson University


ncbi_organism_name: Escherichia coli

ncbi_submitter: Jeonbuk National University


ncbi_country: Russia: Moscow

ncbi_organism_name: Streptomyces fradiae

ncbi_submitter: Vavilov Institute of General Genetics


ncbi_isolation_source: Mariane sediment

ncbi_organism_name: uncultured Chloracidobacterium sp.

ncbi_submitter: marine college, shandong university


ncbi_isolation_source: mouse gut metagenome

ncbi_organism_name: Blautia producta

ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_organism_name: Stenotrophomonas sp. TWI273

ncbi_submitter: University of Technology Sydney


ncbi_country: USA: New York

ncbi_isolation_source: fecal sample

ncbi_organism_name: Bifidobacterium animalis


ncbi_organism_name: Vibrio parahaemolyticus

ncbi_submitter: University of New Hampshire


ncbi_isolation_source: lake water

ncbi_organism_name: Burkholderiaceae bacterium

ncbi_submitter: University of Zurich


ncbi_country: USA: California; Pasadena; JPL; Building 179

ncbi_isolation_source: cleanroom floor

ncbi_organism_name: Virgibacillus pantothenticus

ncbi_submitter: Jet Propulsion Laboratory, California Institute of Technology


ncbi_country: Arctic Ocean

ncbi_isolation_source: sediment core

ncbi_organism_name: Pseudoalteromonas sp. HL-AS1

ncbi_submitter: Seoul National University


ncbi_isolation_source: Lake Lanier 2;4-D mesocosm

ncbi_organism_name: Burkholderia sp. KK1

ncbi_submitter: Georgia Institute of Technology


ncbi_organism_name: Duncaniella muris

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_isolation_source: human gut

ncbi_organism_name: uncultured Bifidobacterium sp.

ncbi_submitter: EMG


ncbi_organism_name: Fusicatenibacter saccharivorans

ncbi_submitter: Helmholtz Centre for Infection Research


ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: University of Verona, Italy


ncbi_organism_name: Weissella paramesenteroides

ncbi_submitter: Qingdao Agricultural University


ncbi_country: USA: Seattle

ncbi_isolation_source: urine

ncbi_submitter: Broad Institute


ncbi_country: France

ncbi_isolation_source: blood

ncbi_organism_name: Francisella salimarina

ncbi_submitter: CHU Grenoble Alpes


ncbi_country: France: Fontainebleau

ncbi_isolation_source: feces from endurance ride Fontainebleau

ncbi_organism_name: Lachnospiraceae bacterium

ncbi_submitter: INRA


ncbi_country: China: Zhongshan Station

ncbi_isolation_source: abdominal contents from Antarctic fish

ncbi_organism_name: Serratia myotis

ncbi_submitter: Shanghai Ocean University


ncbi_assembly_name: IMG-taxon 2599185248 annotated assembly

ncbi_organism_name: Pseudomonas sp. NFACC08-1

ncbi_submitter: DOE - JOINT GENOME INSTITUTE


ncbi_country: USA: MI

ncbi_isolation_source: clinical isolate

ncbi_organism_name: Klebsiella variicola

ncbi_submitter: US Food and Drug Administration


ncbi_country: USA: East Boothbay ME

ncbi_genome_category: derived from single cell

ncbi_isolation_source: single cell amplified by WGA-X; Bigelow Laboratory Dock

ncbi_organism_name: Octadecabacter sp.

ncbi_submitter: Bigelow Laboratory for Ocean Sciences


ncbi_country: Canada: North Alberta

ncbi_isolation_source: Suncor tailing pond sample

ncbi_organism_name: Syntrophaceae bacterium UBA4797

ncbi_submitter: University of Queensland


ncbi_organism_name: uncultured Lachnospiraceae bacterium


ncbi_country: Germany

ncbi_organism_name: Mycobacterium avium subsp. hominissuis

ncbi_submitter: Robert Koch Institute

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium;x__Mycobacterium avium complex (MAC);s__Mycobacterium avium;sb__Mycobacterium avium subsp. hominissuis


ncbi_country: USA: Maywood; IL

ncbi_isolation_source: Urine

ncbi_submitter: Loyola University Chicago


ncbi_country: China: Hubei

ncbi_isolation_source: fish

ncbi_organism_name: Vibrio parahaemolyticus

ncbi_submitter: Beijing Institute of Microbiology and Epidemiology


ncbi_isolation_source: sheep gut metagenome

ncbi_submitter: EMBL-EBI


ncbi_organism_name: Acinetobacter baumannii

ncbi_submitter: HUN-REN Biological Research Centre, Szeged


ncbi_organism_name: bacterium

ncbi_submitter: Institute of Clinical Molecular Biology, University of Kiel, Germany


ncbi_assembly_name: freshwater MAG --- Umea_bin-07145

ncbi_organism_name: uncultured beta proteobacterium

ncbi_submitter: BILS


ncbi_isolation_source: feces

ncbi_organism_name: uncultured Duncaniella sp.

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_isolation_source: mouse gut metagenome

ncbi_organism_name: uncultured Alistipes sp.

ncbi_submitter: Geneva University Hospitals


ncbi_isolation_source: Faeces


ncbi_country: United Kingdom

ncbi_isolation_source: food

ncbi_organism_name: Campylobacter coli

ncbi_submitter: INSTITUTE OF FOOD RESEARCH


ncbi_organism_name: Helicobacter japonicus


ncbi_organism_name: Ligilactobacillus murinus


ncbi_organism_name: uncultured Muribaculaceae bacterium


ncbi_organism_name: Limosilactobacillus reuteri


ncbi_country: North Sea

ncbi_isolation_source: Subsurface seawater

ncbi_organism_name: Flavobacteriales bacterium UBA4445


ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: Medical Mycology Research Center


ncbi_isolation_source: Freshwater lake

ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO


ncbi_organism_name: Sphingopyxis terrae subsp. ummariensis

ncbi_submitter: Institution of Microbiology, Chinese Academy of Science(WDCM)


ncbi_organism_name: Faecalibacterium prausnitzii

ncbi_submitter: Washington University in Saint Louis


ncbi_organism_name: uncultured Lachnospiraceae bacterium

ncbi_submitter: EMG


ncbi_country: China: Shenzhen

ncbi_isolation_source: fecal material [ENVO:00002003]

ncbi_submitter: BGI-Shenzhen

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Anaerostipes;s__Anaerostipes hominis (ex Lee et al. 2021)


ncbi_country: Russia

ncbi_isolation_source: not known

ncbi_organism_name: Mycobacterium tuberculosis

ncbi_submitter: SC


ncbi_isolation_source: not provided

ncbi_organism_name: uncultured Wolbachia sp.

ncbi_submitter: Centre for Integrative Biology (CIBIO), University of Trento


ncbi_isolation_source: pig gut metagenome

ncbi_organism_name: uncultured Clostridium sp.


ncbi_organism_name: Christensenellaceae bacterium


ncbi_isolation_source: faecal

ncbi_organism_name: Enterococcus faecalis


ncbi_country: China

ncbi_isolation_source: CICC

ncbi_organism_name: Streptomyces noursei

ncbi_submitter: Huaibei Normal University


ncbi_organism_name: Pseudomonas sp. SIMBA_021

ncbi_submitter: SIMBA


ncbi_organism_name: Shigella sonnei


ncbi_organism_name: Streptococcus pneumoniae PNI0008

ncbi_submitter: Washington University


ncbi_country: Russia: Moscow region

ncbi_isolation_source: genitourinary system

ncbi_submitter: SRCAMB


ncbi_country: USA

ncbi_isolation_source: hide

ncbi_organism_name: Escherichia coli

ncbi_submitter: Kansas State University


ncbi_submitter: UNIVERSITY OF WARWICK

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Paratyphi A


ncbi_organism_name: Terracidiphilus sp.

ncbi_submitter: The Microflora Danica Consortium


ncbi_organism_name: Phocaeicola vulgatus

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_organism_name: Enterococcus faecium

ncbi_submitter: National Clinical Research Center for Infectious Diseases


ncbi_organism_name: Muribaculaceae bacterium Isolate-043 (Harlan)

ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_country: Ethiopia: Amhara

ncbi_isolation_source: Health Facility

ncbi_organism_name: Mycobacterium simiae

ncbi_submitter: Bahir Dar University


ncbi_country: Bangladesh: Mathbaria

ncbi_isolation_source: water

ncbi_organism_name: Vibrio cholerae

ncbi_submitter: University of Alberta


ncbi_isolation_source: human gut metagenome

ncbi_organism_name: uncultured Prevotella sp.

ncbi_submitter: European Bioinformatics Institute


ncbi_organism_name: bacterium

ncbi_submitter: Helmholtz Centre for Infection Research


ncbi_assembly_name: Boreal Moss Metagenome Coassembled MAG Brown_K_3

ncbi_organism_name: uncultured Mucilaginibacter sp.

ncbi_submitter: Universite de Sherbrooke


ncbi_organism_name: Paenibacillus solisilvae

ncbi_submitter: Institution of Microbiology, Chinese Academy of Science(WDCM)


ncbi_organism_name: Enterobacter hormaechei

ncbi_submitter: National Centre for Infectious Diseases


ncbi_organism_name: uncultured Planctomycetia bacterium

ncbi_submitter: Centre for Microbiome Research

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__PVC group;p__Planctomycetota;c__Planctomycetia;x__environmental samples;s__uncultured Planctomycetia bacterium


ncbi_organism_name: uncultured Oscillospiraceae bacterium


ncbi_organism_name: Staphylococcus saprophyticus

ncbi_submitter: Chung-Ang university


ncbi_organism_name: Klebsiella grimontii

ncbi_submitter: University of Veterinary Sciences Brno


ncbi_organism_name: Paraburkholderia xenovorans

ncbi_submitter: University of Illinois at Chicago


ncbi_submitter: WELLCOME SANGER INSTITUTE

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;x__Rickettsieae;g__Candidatus Tisiphia;x__unclassified Candidatus Tisiphia;s__Candidatus Tisiphia endosymbiont of Neophilaenus lineatus


ncbi_organism_name: Rhizobium paknamense

ncbi_strain_identifiers: TBRC 4640


ncbi_isolation_source: human gut

ncbi_organism_name: uncultured Eubacteriales bacterium

ncbi_submitter: EMG


ncbi_country: South Korea: Seoul

ncbi_isolation_source: Pus

ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: Yonsei university college of medicine


ncbi_organism_name: Salmonella enterica

ncbi_submitter: Huzhou center for disease control and prevention


ncbi_organism_name: Campylobacter jejuni

ncbi_submitter: Texas A&M University


ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_organism_name: Acinetobacter baumannii 25253_3

ncbi_submitter: Institute for Genome Sciences


ncbi_country: USA: Chattahoochee River

ncbi_isolation_source: water samples from lakes and estuaries along the Chattahoochee River collected between June/2010 and December/2014

ncbi_organism_name: Rhodobacterales bacterium

ncbi_submitter: Georgia Institute of Technology


ncbi_country: USA: Ohio

ncbi_isolation_source: urine

ncbi_organism_name: Klebsiella pneumoniae subsp. pneumoniae

ncbi_submitter: JCVI

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;x__Klebsiella/Raoultella group;g__Klebsiella;x__Klebsiella pneumoniae complex;s__Klebsiella pneumoniae;sb__Klebsiella pneumoniae subsp. pneumoniae


ncbi_organism_name: Actinomadura kijaniata NBRC 14229

ncbi_submitter: National Institute of Technology and Evaluation


ncbi_country: Netherlands

ncbi_isolation_source: Blood

ncbi_organism_name: Streptococcus pneumoniae

ncbi_submitter: SC


ncbi_isolation_source: Urine

ncbi_organism_name: Enterococcus faecalis

ncbi_submitter: Loyola University Chicago


ncbi_organism_name: Shigella flexneri

ncbi_submitter: RIVM - National Institute for Public Health and the Environment


ncbi_isolation_source: mouse gut metagenome

ncbi_organism_name: uncultured Lachnospiraceae bacterium

ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_isolation_source: sputum

ncbi_organism_name: Acinetobacter bereziniae

ncbi_submitter: Shenzhen University


ncbi_isolation_source: ruminant gastrointestinal tract

ncbi_organism_name: Lachnospiraceae bacterium

ncbi_submitter: Nanjing Agricultural University


ncbi_country: China: Guangzhou

ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: GUANGZHOU CDC,China


ncbi_country: China: Wuxi

ncbi_isolation_source: Cooling tower water

ncbi_organism_name: Legionella pneumophila

ncbi_submitter: National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr


ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured Alistipes sp.


ncbi_organism_name: Lactobacillus intestinalis


ncbi_organism_name: uncultured Muribaculaceae bacterium


ncbi_country: Peru: Lima

ncbi_isolation_source: patient

ncbi_organism_name: Mycobacterium tuberculosis

ncbi_submitter: CETR, HSPH, Megan Murray, director


ncbi_assembly_name: freshwater MAG --- Loc090907-5m_bin-395

ncbi_isolation_source: lake water

ncbi_organism_name: Candidatus Falkowbacteria bacterium

ncbi_submitter: BILS

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;x__Patescibacteria group;x__Parcubacteria group;p__Candidatus Falkowiibacteriota;x__unclassified Candidatus Falkowbacteria;s__Candidatus Falkowbacteria bacterium


ncbi_country: Tonga: Lau Basin

ncbi_isolation_source: gill tissue; hydrothermal vent

ncbi_organism_name: Thiolapillus sp.

ncbi_submitter: University of Rhode Island


ncbi_organism_name: Escherichia coli

ncbi_submitter: Central Research Institute of Epidemiology


ncbi_country: Portugal: Azores; Espalamaca

ncbi_isolation_source: Surface seawater

ncbi_organism_name: Nioella nitratireducens

ncbi_submitter: The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources


ncbi_country: Taiwan

ncbi_isolation_source: throat swabs

ncbi_organism_name: Mycoplasmoides pneumoniae

ncbi_submitter: Chang Gung University, Taiwan


ncbi_organism_name: Bifidobacterium adolescentis

ncbi_submitter: Institute of Clinical Molecular Biology, University of Kiel, Germany


ncbi_isolation_source: Abscess


ncbi_country: Costa Rica: Guanacaste

ncbi_isolation_source: cuticle

ncbi_organism_name: Saccharopolyspora sp. 7B

ncbi_submitter: Universidad de La Frontera


ncbi_isolation_source: sheep gut metagenome

ncbi_organism_name: uncultured Clostridia bacterium

ncbi_submitter: EMG

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Clostridia;x__environmental samples;s__uncultured Clostridia bacterium


ncbi_country: Mozambique

ncbi_isolation_source: stool sample

ncbi_submitter: Georgia Institute of Technology


ncbi_country: Germany: Tubingen

ncbi_isolation_source: leaf

ncbi_organism_name: Cellulomonas sp. Leaf334

ncbi_submitter: Max Planck Institute for Plant Breeding Research


ncbi_country: South Korea: Gyeongsang

ncbi_isolation_source: Chicken meats

ncbi_submitter: Chung-Ang University


ncbi_country: China: Changsha

ncbi_submitter: Xiangya hospital, Central South University


ncbi_submitter: Center for Microbial Communities


ncbi_organism_name: Streptococcus pneumoniae

ncbi_submitter: UNIVERSITY OF MANCHESTER


ncbi_country: USA

ncbi_isolation_source: feces

ncbi_organism_name: Clostridioides difficile

ncbi_submitter: Children's Hospital of Philadelphia


ncbi_country: Germany: Southern Germany

ncbi_isolation_source: raw milk

ncbi_organism_name: Pseudomonas haemolytica

ncbi_submitter: Technische Universitaet Muenchen


ncbi_organism_name: Burkholderia sp. ABCPW 14

ncbi_submitter: Northern Arizona University


ncbi_organism_name: Corynebacterium pseudotuberculosis

ncbi_submitter: Chemisches und Veterinaeruntersuchungsamt Stuttgart


ncbi_country: Turkey: Ankara

ncbi_isolation_source: Clinical patient

ncbi_organism_name: Mycobacteroides abscessus subsp. abscessus

ncbi_submitter: Pittsburgh Bacteriophage Institute


ncbi_organism_name: uncultured Arcobacteraceae bacterium


ncbi_isolation_source: chicken caecal content

ncbi_organism_name: uncultured Desulfovibrio sp.

ncbi_submitter: Institut National pour la Recherche Agronomique (FRANCE)


ncbi_organism_name: Shigella flexneri

ncbi_submitter: Helmholtz Centre for Infection Research


ncbi_country: France

ncbi_organism_name: Francisella tularensis

ncbi_submitter: ANSES


ncbi_organism_name: Sutterella wadsworthensis


ncbi_organism_name: Verrucomicrobiota bacterium

ncbi_submitter: University of Waterloo


ncbi_organism_name: Pseudomonadaceae bacterium

ncbi_submitter: Helmholtz Centre for Environmental Research - UFZ


ncbi_country: China:Hong Kong SAR; Shatin waste water treatment plant

ncbi_isolation_source: activated sludge from Shatin waste water treatment plant collected monthly from 2007 through 2015

ncbi_organism_name: Planctomycetales bacterium

ncbi_submitter: The University Hong Kong


ncbi_country: China: Guangxi; Longshenao

ncbi_isolation_source: sediment

ncbi_submitter: an eLibrary of Microbial Systematics and Genomics

ncbi_taxonomy_unfiltered: d__Bacteria;x__delta/epsilon subdivisions;c__Deltaproteobacteria;o__Candidatus Acidulodesulfobacterales;g__Candidatus Acididesulfobacter;s__Candidatus Acididesulfobacter diazotrophicus


ncbi_submitter: The University of Tokyo

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Clostridia;o__Eubacteriales;f__Oscillospiraceae;g__Thermoclostridium;s__Thermoclostridium stercorarium;sb__Thermoclostridium stercorarium subsp. thermolacticum;x__Thermoclostridium stercorarium subsp. thermolacticum JCM 9324


ncbi_organism_name: Alteromonas australica

ncbi_submitter: EMG


ncbi_isolation_source: mouse gut metagenome

ncbi_organism_name: uncultured Eubacteriaceae bacterium

ncbi_submitter: Insytitute of microbiology and epidemiology


ncbi_country: United Kingdom

ncbi_isolation_source: Unknown

ncbi_organism_name: Streptococcus suis

ncbi_submitter: SC


ncbi_country: South Korea

ncbi_organism_name: Polaribacter pectinis

ncbi_submitter: Kyung Hee University


ncbi_isolation_source: Faeces

ncbi_organism_name: Ligilactobacillus murinus

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_isolation_source: rhizosphere soil in ginger field

ncbi_organism_name: Serratia marcescens

ncbi_submitter: Sichuan University


ncbi_country: China: Beijing

ncbi_organism_name: Stenotrophomonas maltophilia

ncbi_submitter: Chinese PLA General Hospital


ncbi_country: Italy: Basilicata Region

ncbi_isolation_source: traditional fermented sausages

ncbi_organism_name: Pediococcus pentosaceus

ncbi_submitter: University of Basilicata


ncbi_organism_name: Streptomyces sp. NPDC013455

ncbi_submitter: The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology


ncbi_country: Panama: Bocas del Toro; Inner Solarte

ncbi_isolation_source: sponge tissue

ncbi_organism_name: Candidatus Binatia bacterium

ncbi_submitter: Stony Brook University

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;p__Candidatus Binatota;c__Candidatus Binatia;x__unclassified Candidatus Binatia;s__Candidatus Binatia bacterium


ncbi_isolation_source: Chicken Breast

ncbi_submitter: University of California at Davis

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Kentucky


ncbi_isolation_source: Lebeckia ambigua root nodules

ncbi_organism_name: Paraburkholderia fynbosensis

ncbi_submitter: GHENT UNIVERSITY


ncbi_organism_name: uncultured Alistipes sp.


ncbi_assembly_name: Salmonella enterica CVM N43825 v1.0

ncbi_country: USA: MD

ncbi_submitter: FDA

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Typhimurium


ncbi_country: China: Shenzhen

ncbi_isolation_source: fecal material [ENVO:00002003]

ncbi_organism_name: Intestinimonas butyriciproducens

ncbi_submitter: BGI-Shenzhen


ncbi_submitter: Arizona State University

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Typhimurium;x__Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1


ncbi_country: USA: East Boothbay ME

ncbi_isolation_source: single cell amplified by WGA-X; Bigelow Laboratory Dock

ncbi_organism_name: Methylophilaceae bacterium

ncbi_submitter: Bigelow Laboratory for Ocean Sciences


ncbi_organism_name: uncultured Muribaculaceae bacterium


ncbi_country: China: Guangdong; Yunfu

ncbi_organism_name: Sulfobacillus benefaciens

ncbi_submitter: an eLibrary of Microbial Systematics and Genomics

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Clostridia;o__Eubacteriales;x__Eubacteriales incertae sedis;f__Clostridiales Family XVII. Incertae Sedis;g__Sulfobacillus;s__Sulfobacillus benefaciens


ncbi_country: Baltic Sea

ncbi_isolation_source: water

ncbi_organism_name: Proteobacteria bacterium UBA4015

ncbi_submitter: University of Queensland

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;x__unclassified Pseudomonadota;s__Proteobacteria bacterium UBA4015


ncbi_organism_name: Streptomyces sp. NPDC126522


ncbi_country: Spain

ncbi_isolation_source: pork industry

ncbi_organism_name: Listeria monocytogenes

ncbi_submitter: ISCIII


ncbi_organism_name: Gallibacterium anatis

ncbi_submitter: Clinic for Poultry and Fish Medicine - Vetmeduni Vienna


ncbi_organism_name: Tepidisphaerales bacterium

ncbi_submitter: East China Normal University


ncbi_organism_name: Serratia fonticola

ncbi_submitter: DOE Joint Genome Institute


ncbi_country: USA: Boston; MA

ncbi_isolation_source: urine

ncbi_organism_name: Staphylococcus aureus M0969

ncbi_submitter: Broad Institute


ncbi_organism_name: Cupriavidus phytorum

ncbi_submitter: INSTITUT PASTEUR


ncbi_country: USA: Massachusetts; Ipswich

ncbi_isolation_source: Ixodes scapularis tick isolate by feeding on SCID mouse and isolated from blood sample in MKP-F culture

ncbi_organism_name: Borrelia miyamotoi

ncbi_submitter: AMC (Amsterdam, The Netherlands) and CRIE (Moscow, Russia)


ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: University Hospital of Besancon


ncbi_country: USA: Texas

ncbi_isolation_source: feces

ncbi_submitter: Keri Norman's shared submissions

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Anatum


ncbi_isolation_source: high severity burned soil

ncbi_organism_name: Mycetocola sp.

ncbi_submitter: Colorado State University


ncbi_organism_name: uncultured Helicobacter sp.

ncbi_submitter: stanford university school of medicine


ncbi_country: China: Jiangsu

ncbi_organism_name: Enterococcus faecium

ncbi_submitter: Yangzhou University


ncbi_isolation_source: human feces metagenome

ncbi_organism_name: uncultured Sutterella sp.

ncbi_submitter: EMG


ncbi_organism_name: Candidatus Nanopelagicales bacterium

ncbi_submitter: University of Waterloo

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Actinomycetota;c__Actinomycetes;o__Candidatus Nanopelagicales;x__unclassified Candidatus Nanopelagicales;s__Candidatus Nanopelagicales bacterium


ncbi_country: Russia

ncbi_isolation_source: not known

ncbi_organism_name: Mycobacterium tuberculosis

ncbi_submitter: SC


ncbi_organism_name: uncultured Muribaculaceae bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_submitter: Centre for Microbiome Research


ncbi_organism_name: uncultured Prevotella sp.


ncbi_isolation_source: mangrove

ncbi_organism_name: Mycolicibacterium moriokaense

ncbi_submitter: University of Macau


ncbi_country: USA: Sunset Cove; Odell Lake; Oregon

ncbi_isolation_source: freshwater lake cyanobacterial bloom; sample filtered onto 1.2 um poresize filter

ncbi_organism_name: Dolichospermum sp. OL01

ncbi_submitter: Oregon State University


ncbi_organism_name: uncultured Eggerthella sp.


ncbi_organism_name: Simonsiella muelleri


ncbi_country: USA: Wisconsin; Madison

ncbi_isolation_source: Alar crease Swab

ncbi_organism_name: Staphylococcus epidermidis

ncbi_submitter: University of Wisconsin - Madison


ncbi_organism_name: Elusimicrobiota bacterium

ncbi_submitter: Linnaeus University


ncbi_organism_name: uncultured Flavipsychrobacter sp.


ncbi_organism_name: Planctomycetota bacterium

ncbi_submitter: EPFL


ncbi_organism_name: Anaerostipes caccae

ncbi_submitter: Washington University in Saint Louis


ncbi_organism_name: Parabacteroides distasonis

ncbi_submitter: Federal Research and Clinical Centre of Physical-Chemical Medicine


ncbi_organism_name: [Kitasatospora] papulosa

ncbi_submitter: The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology


ncbi_organism_name: Polaromonas sp.

ncbi_submitter: The University of Texas at Austin


ncbi_organism_name: uncultured Coriobacteriaceae bacterium


ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: Miguel Servet University Hospital


ncbi_organism_name: uncultured Saprospiraceae bacterium


ncbi_organism_name: Lactiplantibacillus argentoratensis

ncbi_submitter: University of Copenhagen


ncbi_organism_name: Streptomyces cyaneofuscatus


ncbi_submitter: Center for Microbial Communities


ncbi_organism_name: Candidatus Brevifilum fermentans

ncbi_submitter: University of British Columbia


ncbi_organism_name: Aquabacterium sp.

ncbi_submitter: Tsinghua University

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Betaproteobacteria;o__Burkholderiales;x__Burkholderiales genera incertae sedis;g__Aquabacterium;x__unclassified Aquabacterium;s__Aquabacterium sp.


ncbi_organism_name: Roseivirga sp.

ncbi_submitter: University of East Anglia


ncbi_isolation_source: ruminant gastrointestinal tract

ncbi_organism_name: Clostridia bacterium

ncbi_submitter: Nanjing Agricultural University


ncbi_isolation_source: low severity burned soil

ncbi_organism_name: Chloroflexota bacterium

ncbi_submitter: Colorado State University


ncbi_country: China: Banpo Antimony Mine; Guizhou Province

ncbi_isolation_source: acid mine drainage sediment

ncbi_organism_name: Pseudomonadota bacterium

ncbi_submitter: Sun Yat-sen University, Guangzhou


ncbi_organism_name: uncultured Acidobacteriota bacterium

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Acidobacteriota;x__environmental samples;s__uncultured Acidobacteriota bacterium


ncbi_organism_name: Oscillospiraceae bacterium


ncbi_organism_name: Ruminococcus sp.

ncbi_submitter: Helmholtz Centre for Infection Research


ncbi_organism_name: Nocardia sp. NPDC059177


ncbi_country: USA: Pittsburgh; Magee-Womens Hospital of UPMC

ncbi_isolation_source: infant feces

ncbi_organism_name: Clostridiales bacterium

ncbi_submitter: University of California, Berkeley


ncbi_organism_name: Bacteroides thetaiotaomicron


ncbi_organism_name: Nitrospirota bacterium

ncbi_submitter: Biology Meets Subduction, Deep Carbon Observatory


ncbi_country: USA: Irvine; CA

ncbi_isolation_source: blood

ncbi_organism_name: Staphylococcus aureus PLAC6044

ncbi_submitter: Broad Institute


ncbi_country: New Zealand

ncbi_isolation_source: throat

ncbi_organism_name: Streptococcus pyogenes

ncbi_submitter: University of Melbourne


ncbi_organism_name: Actinomycetes bacterium

ncbi_submitter: North West University


ncbi_organism_name: uncultured Acidimicrobiia bacterium


ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: National Center of Infectious and Parasitic Diseases


ncbi_isolation_source: metagenome

ncbi_organism_name: uncultured Oscillospiraceae bacterium

ncbi_submitter: THE ROSLIN INSTITUTE


ncbi_organism_name: Acinetobacter johnsonii

ncbi_submitter: Yunnan Agricultural University


ncbi_organism_name: Prevotella sp.

ncbi_submitter: Washington University School of Medicine


ncbi_country: USA: MA

ncbi_isolation_source: shrimp

ncbi_organism_name: Escherichia coli

ncbi_submitter: FDA/CFSAN


ncbi_country: South Korea:Muan

ncbi_organism_name: Lactiplantibacillus plantarum

ncbi_submitter: Microbial Institute for Fermentation Industry


ncbi_country: USA: WA

ncbi_submitter: University of Washington


ncbi_submitter: National Institute of Technology and Evaluation

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Aerococcaceae;g__Aerococcus;s__Aerococcus urinae;x__Aerococcus urinae NBRC 15544 = CCUG 36881


ncbi_organism_name: Planctomycetota bacterium

ncbi_submitter: EPFL


ncbi_organism_name: Flavobacteriales bacterium

ncbi_submitter: University of California Davis


ncbi_organism_name: Streptococcus parasanguinis

ncbi_submitter: Banfield Lab, University of California, Berkeley


ncbi_organism_name: Lactococcus lactis

ncbi_strain_identifiers: VHProbi V60

ncbi_submitter: Nutrition &Health Technology Center


ncbi_organism_name: Anaplasma phagocytophilum

ncbi_submitter: INRA-MIG


ncbi_organism_name: uncultured bacterium

ncbi_submitter: EMG


ncbi_organism_name: Burkholderiales bacterium

ncbi_submitter: Second Institute Of Oceanography,MNR


ncbi_country: Denmark: Kalundborg

ncbi_isolation_source: activated sludge from Kalu_18-Q3-R12-55

ncbi_organism_name: Hahellaceae bacterium

ncbi_submitter: Aalborg University


ncbi_country: USA: St. Louis; Missori

ncbi_isolation_source: urine

ncbi_organism_name: Klebsiella variicola

ncbi_submitter: Washington University


ncbi_organism_name: Phocaeicola dorei


ncbi_isolation_source: Faeces

ncbi_organism_name: Lactobacillus johnsonii

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_country: USA: Buffalo; NY

ncbi_isolation_source: sputum

ncbi_organism_name: Haemophilus influenzae

ncbi_submitter: Institute for Genome Sciences, University of Maryland, Baltimore


ncbi_organism_name: Romboutsia timonensis

ncbi_submitter: Washington University in Saint Louis


ncbi_country: Denmark: Aalborg

ncbi_isolation_source: feces

ncbi_organism_name: Campylobacter concisus

ncbi_submitter: University of Bath


ncbi_country: USA: California

ncbi_isolation_source: water

ncbi_organism_name: Campylobacter lari

ncbi_submitter: USDA, ARS, WRRC


ncbi_organism_name: Desulfocapsaceae bacterium

ncbi_submitter: WELLCOME SANGER INSTITUTE


ncbi_country: Canada: Lacombe

ncbi_organism_name: Eubacterium sp.

ncbi_submitter: AAFC


ncbi_country: Germany

ncbi_isolation_source: bile duct of patients with Primary sclerosing cholangitis (PSC)

ncbi_organism_name: Staphylococcus sp. FR179

ncbi_submitter: Helmholtz Centre for Infection Research, HZI


ncbi_country: South Korea: Hwado-eup; Namyangju-si; Gyeonggi-do

ncbi_isolation_source: Homemade Cheese

ncbi_organism_name: Enterococcus lactis

ncbi_strain_identifiers: IDCC 2105

ncbi_submitter: Ildong Pharmaceutical


ncbi_country: USA

ncbi_isolation_source: marine aquarium; La Jolla; CA

ncbi_organism_name: Xenococcus sp. PCC 7305

ncbi_submitter: JGI

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;x__Cyanobacteriota/Melainabacteria group;p__Cyanobacteriota;c__Cyanophyceae;o__Pleurocapsales;f__Xenococcaceae;g__Xenococcus;x__unclassified Xenococcus (in: cyanobacteria);s__Xenococcus sp. PCC 7305


ncbi_organism_name: Citrifermentans bremense R1

ncbi_submitter: DOE Joint Genome Institute


ncbi_isolation_source: mouse gut metagenome


ncbi_organism_name: Acinetobacter sp. 85

ncbi_submitter: CHUAC (Centro Hospitalario Universitario de A Coruna)/INIBIC (Instituto Biomedico de A Coruna)


ncbi_country: Russia: Kulunda Steppe

ncbi_isolation_source: hypersaline soda lake sediment

ncbi_organism_name: Bacteroidales bacterium

ncbi_submitter: Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam


ncbi_organism_name: Chloroflexota bacterium

ncbi_submitter: Zhejiang University


ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: the seqafrica consortium


ncbi_country: Belgium

ncbi_organism_name: Escherichia coli

ncbi_submitter: Universiteit Gent


ncbi_organism_name: Pseudonocardiales bacterium

ncbi_submitter: Colorado State University


ncbi_country: USA: WI

ncbi_isolation_source: Young Turkeys

ncbi_organism_name: Enterococcus faecalis

ncbi_strain_identifiers: CVM N59896F

ncbi_submitter: FDA


ncbi_isolation_source: marine water

ncbi_organism_name: uncultured Candidatus Actinomarina sp.

ncbi_submitter: WOODS HOLE OCEANOGRAPHIC INSTITUTION

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Actinomycetota;c__Actinomycetes;x__Candidatus Actinomarinidae;o__Candidatus Actinomarinales;x__Candidatus Actinomarineae;f__Candidatus Actinomarinaceae;g__Candidatus Actinomarina;x__environmental samples;s__uncultured Candidatus Actinomarina sp.


ncbi_country: China

ncbi_organism_name: Salmonella enterica subsp. enterica

ncbi_strain_identifiers: SaB

ncbi_submitter: Southwest Medical University


ncbi_isolation_source: vaginal metagenome

ncbi_organism_name: Anaerococcus vaginalis

ncbi_submitter: EMG


ncbi_country: USA: California; Los Angeles County

ncbi_organism_name: Acinetobacter baumannii

ncbi_submitter: Los Angeles County Public Health Lab microbial pathogen submission group


ncbi_organism_name: Pseudomonas viridiflava

ncbi_submitter: MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY


ncbi_organism_name: Christensenellaceae bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_country: Atlantic Ocean: North Atlantic Ocean

ncbi_isolation_source: marine water sample

ncbi_organism_name: Flavobacteriaceae bacterium

ncbi_submitter: Tara Oceans Consortium


ncbi_organism_name: Clostridia bacterium

ncbi_submitter: University of Chinese Academy of Sciences


ncbi_organism_name: Varibaculum cambriense

ncbi_submitter: Banfield Lab, University of California, Berkeley


ncbi_country: Mali: Point G Hospital

ncbi_isolation_source: Bodily fluid

ncbi_submitter: Broad Institute

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium;x__Mycobacterium tuberculosis complex;s__Mycobacterium tuberculosis;x__Mycobacterium tuberculosis variant africanum;x__Mycobacterium tuberculosis variant africanum MAL010118


ncbi_organism_name: Escherichia coli O26:H11

ncbi_submitter: Microbiology, Graduate School of Medical Sciences, Kyushu University


ncbi_country: Nigeria

ncbi_isolation_source: Lizard faeces

ncbi_submitter: University of California at Davis

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Elizabethville


ncbi_country: China: Luzhou

ncbi_isolation_source: mud

ncbi_organism_name: Bacteroidales bacterium UBA5266

ncbi_submitter: University of Queensland

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;x__Bacteroidota/Chlorobiota group;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;x__unclassified Bacteroidales;s__Bacteroidales bacterium UBA5266


ncbi_country: Australia: Brisbane

ncbi_organism_name: Fusicatenibacter saccharivorans

ncbi_submitter: The University of Queensland


ncbi_country: Japan

ncbi_isolation_source: Bos taurus

ncbi_submitter: Laboratory of Bacterial Genomics, Pathogen Genomics Center, National Institute of Infectious Diseases

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


ncbi_assembly_name: Rumen uncultured genome RUG12204

ncbi_isolation_source: cattle rumen

ncbi_organism_name: uncultured Bacteroidia bacterium

ncbi_submitter: THE ROSLIN INSTITUTE

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;x__Bacteroidota/Chlorobiota group;p__Bacteroidota;c__Bacteroidia;x__environmental samples;s__uncultured Bacteroidia bacterium


ncbi_country: Thailand

ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: SC


ncbi_organism_name: Oscillospiraceae bacterium


ncbi_isolation_source: saline water (ENVO:00002010); including plankton (ENVO:xxxxxxxx)

ncbi_organism_name: Candidatus Neomicrothrix sp. UBA3522

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Actinomycetota;c__Acidimicrobiia;o__Acidimicrobiales;f__Microthrixaceae;g__Candidatus Neomicrothrix;x__unclassified Candidatus Neomicrothrix;s__Candidatus Neomicrothrix sp. UBA3522


ncbi_isolation_source: homo

ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: ZHEJIANG UNIVERSITY


ncbi_organism_name: Erwinia aphidicola

ncbi_submitter: Collaborative Crop Resilience Program


ncbi_organism_name: Burkholderia pseudomallei INT2-Bp184

ncbi_submitter: US Army Edgewood Chemical Biological Center


ncbi_organism_name: Pseudolabrys sp.

ncbi_submitter: The Microflora Danica Consortium


ncbi_organism_name: uncultured Candidatus Binatia bacterium

ncbi_submitter: WELLCOME SANGER INSTITUTE

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;p__Candidatus Binatota;c__Candidatus Binatia;x__environmental samples;s__uncultured Candidatus Binatia bacterium


ncbi_organism_name: Paenarthrobacter sp. TAF1

ncbi_submitter: CCRP


ncbi_country: Brazil

ncbi_isolation_source: blood

ncbi_submitter: Instituto Oswaldo Cruz


ncbi_country: China: Shanghai

ncbi_organism_name: Vibrio cholerae

ncbi_submitter: Shanghai ocean university


ncbi_isolation_source: Colon

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_organism_name: Coprococcus comes

ncbi_submitter: Institute of Clinical Molecular Biology, University of Kiel, Germany


ncbi_isolation_source: NEUS_F1 leachate from a leachate well at an active municipal landfill in the North Eastern United States

ncbi_organism_name: Patescibacteria group bacterium

ncbi_submitter: University of Waterloo

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;x__Patescibacteria group;x__unclassified Patescibacteria group;s__Patescibacteria group bacterium


ncbi_country: Germany: Leipzig

ncbi_isolation_source: environmental

ncbi_organism_name: Synechocystis sp. PCC 6803

ncbi_submitter: Helmholtz Centre for Environmental Research - UFZ


ncbi_organism_name: Rubrivivax sp.


ncbi_organism_name: Methylobacterium sp. AMS5

ncbi_submitter: Graduate school of life sciences, Tohoku University


ncbi_assembly_name: Rumen uncultured genome RUG13605

ncbi_organism_name: uncultured Ruminococcus sp.


ncbi_submitter: Fudan University


ncbi_submitter: JCVI


ncbi_country: USA: Boston; MA

ncbi_isolation_source: nares

ncbi_organism_name: Staphylococcus aureus M0338

ncbi_submitter: Broad Institute


ncbi_country: Poland: Warszawa

ncbi_isolation_source: hospital environment

ncbi_organism_name: Pseudomonas asiatica

ncbi_submitter: National Medicines Institute


ncbi_country: USA

ncbi_organism_name: Acinetobacter baumannii 26016_1

ncbi_submitter: Institute for Genome Sciences


ncbi_organism_name: Salmonella enterica

ncbi_submitter: University of the Philippines Diliman


ncbi_organism_name: Streptococcus canis

ncbi_submitter: FU berlin


ncbi_organism_name: Enterococcus entomosocium

ncbi_submitter: Technical University of Denmark


ncbi_organism_name: Staphylococcus aureus M0650


ncbi_organism_name: Enterococcus sp. E5-162

ncbi_submitter: Institute of Marine Research


ncbi_strain_identifiers: ATCC 7050

ncbi_submitter: American Type Culture Collection (ATCC)

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Heyndrickxia;s__Heyndrickxia coagulans;x__Heyndrickxia coagulans DSM 1 = ATCC 7050


ncbi_submitter: Agriculture Victoria

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Mycoplasmatota;c__Mollicutes;o__Acholeplasmatales;f__Acholeplasmataceae;g__Candidatus Phytoplasma;x__16SrII (Peanut WB group);s__Candidatus Phytoplasma australasiaticum;sb__Candidatus Phytoplasma australasiaticum subsp. ipomoeae


ncbi_isolation_source: human gut metagenome

ncbi_organism_name: uncultured bacterium

ncbi_submitter: European Bioinformatics Institute


ncbi_organism_name: Acidimicrobiia bacterium

ncbi_submitter: Rutgers University


ncbi_isolation_source: human gut

ncbi_submitter: EMG


ncbi_submitter: Zhejiang University


ncbi_organism_name: Campylobacter lari

ncbi_submitter: Croatian Veterinary Institute, Zagreb


ncbi_organism_name: Mycobacterium sp. HOS86

ncbi_submitter: AIIMS, New Delhi


ncbi_organism_name: Rhodanobacter sp. Root179

ncbi_submitter: Max Planck Institute for Plant Breeding Research


ncbi_organism_name: Victivallis vadensis

ncbi_submitter: Federal Research and Clinical Centre of Physical-Chemical Medicine


ncbi_organism_name: Vicinamibacterales bacterium

ncbi_submitter: WELLCOME SANGER INSTITUTE


ncbi_organism_name: Ilyomonas sp.


ncbi_organism_name: Capnocytophaga canimorsus

ncbi_submitter: Bacterial Special Pathogens Branch (CDC)


ncbi_organism_name: Henriciella sp.

ncbi_submitter: Southern University of Science and Technology


ncbi_country: Canada: Vancouver; Saanich Inlet

ncbi_isolation_source: hypoxic seawater

ncbi_organism_name: bacterium

ncbi_submitter: The University of Melbourne


ncbi_isolation_source: chicken caecal content

ncbi_submitter: Institut National pour la Recherche Agronomique (FRANCE)


ncbi_country: USA: Angelo Coast Range Reserve; CA

ncbi_isolate: gp6 AA47

ncbi_isolation_source: meadow soil

ncbi_organism_name: Acidobacteriota bacterium

ncbi_strain_identifiers: gp6 AA47

ncbi_submitter: Jill Banfield's Lab at Berkeley


ncbi_isolation_source: human feces

ncbi_organism_name: uncultured Bacilli bacterium

ncbi_submitter: stanford university school of medicine

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Bacilli;x__environmental samples;s__uncultured Bacilli bacterium


ncbi_organism_name: Bacteroidia bacterium

ncbi_submitter: CLUE-TERRA

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;x__Bacteroidota/Chlorobiota group;p__Bacteroidota;c__Bacteroidia;x__unclassified Bacteroidia;s__Bacteroidia bacterium


ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: Centers for Disease Control and Prevention


ncbi_isolation_source: mouse gut metagenome

ncbi_organism_name: uncultured Eubacteriales bacterium

ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_isolation_source: feces

ncbi_organism_name: Duncaniella muris

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_country: China: Shihezi;Xinjiang

ncbi_isolation_source: Drumstick from retail market

ncbi_organism_name: Listeria monocytogenes

ncbi_submitter: Shihezi University


ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured Muribaculaceae bacterium


ncbi_country: South Africa: University of Cape Town; Rondebosch

ncbi_isolation_source: Cyanide and thiocyanate bioreactor

ncbi_organism_name: Niastella sp. SCN 39-18

ncbi_submitter: Banfield Lab, University of California, Berkeley

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;x__Bacteroidota/Chlorobiota group;p__Bacteroidota;c__Chitinophagia;o__Chitinophagales;f__Chitinophagaceae;g__Niastella;x__unclassified Niastella;s__Niastella sp. SCN 39-18


ncbi_organism_name: uncultured Ralstonia sp.

ncbi_submitter: EMG


ncbi_organism_name: Janibacter sp. LM

ncbi_strain_identifiers: LM

ncbi_submitter: Shandong University


ncbi_assembly_name: freshwater MAG --- MJ-2014-D1_bin-0608

ncbi_isolation_source: lake water

ncbi_organism_name: uncultured Burkholderiales bacterium

ncbi_submitter: BILS


ncbi_isolation_source: Human

ncbi_organism_name: Klebsiella pneumoniae subsp. pneumoniae

ncbi_submitter: Toho University

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;x__Klebsiella/Raoultella group;g__Klebsiella;x__Klebsiella pneumoniae complex;s__Klebsiella pneumoniae;sb__Klebsiella pneumoniae subsp. pneumoniae


ncbi_organism_name: Bacillus licheniformis

ncbi_submitter: USDA-ARS-NCAUR


ncbi_organism_name: Campylobacter coli

ncbi_submitter: Institute of Animal Husbandry and Veterinary, Hubei Academy of Agricultural Sciences


ncbi_organism_name: Lachnospiraceae bacterium OM04-12BH

ncbi_submitter: Institute of Clinical Molecular Biology, University of Kiel, Germany


ncbi_isolation_source: anaerobic digestion of organic wastes under variable temperature conditions and feedstocks

ncbi_organism_name: Syntrophomonadaceae bacterium

ncbi_submitter: Technical University of Denmark


ncbi_organism_name: Roseburia sp.

ncbi_submitter: Helmholtz Centre for Infection Research


ncbi_country: Russia: Dagestan

ncbi_isolation_source: fermented milk

ncbi_organism_name: Lactococcus lactis

ncbi_submitter: Research Center of Biotechnology RAS


ncbi_isolation_source: faecal

ncbi_organism_name: Enterococcus faecalis

ncbi_submitter: SC


ncbi_isolation_source: cecum

ncbi_organism_name: Bilophila wadsworthia

ncbi_submitter: Quadram Institutte


ncbi_organism_name: Raoultibacter timonensis

ncbi_submitter: Laboratory for Microbiome Sciences, Center for Integrative Medical Sciences, RIKEN


ncbi_country: USA: Tennessee

ncbi_isolation_source: Rectal

ncbi_organism_name: Escherichia coli

ncbi_submitter: St. Jude Children's Research Hospital


ncbi_organism_name: uncultured Acetatifactor sp.

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_organism_name: Rhodobacterales bacterium

ncbi_submitter: EPFL


ncbi_organism_name: Clostridia bacterium

ncbi_submitter: University of Chinese Academy of Sciences


ncbi_country: Denmark

ncbi_isolation_source: Vaginal-rectal

ncbi_organism_name: Streptococcus agalactiae

ncbi_submitter: Novartis Vaccines


ncbi_country: USA: California; Middletown

ncbi_isolation_source: groundwater

ncbi_organism_name: Candidatus Kerfeldbacteria bacterium

ncbi_submitter: Innovative Genomics Institute

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;x__Patescibacteria group;x__Parcubacteria group;p__Candidatus Kerfeldiibacteriota;x__unclassified Candidatus Kerfeldbacteria;s__Candidatus Kerfeldbacteria bacterium


ncbi_organism_name: Tistrella mobilis

ncbi_submitter: Shenzhen Bay Lab


ncbi_organism_name: Desulfovibrionaceae bacterium

ncbi_submitter: Institute of Soil Biology and Biogeochemistry, Biology Cenre, CAS


ncbi_organism_name: Bifidobacterium longum

ncbi_submitter: RWTH Aachen University Hospital


ncbi_country: South Korea: West Sea

ncbi_isolation_source: seawater

ncbi_organism_name: Alteromonadaceae bacterium BrNp21-10

ncbi_submitter: Chungbuk National University


ncbi_organism_name: Yoonia sp. 76

ncbi_submitter: Shenzhen Research Institute, The Chinese University of Hong Kong


ncbi_organism_name: Turicimonas muris


ncbi_organism_name: Candidatus Flavonifractor merdavium


ncbi_organism_name: uncultured Alistipes sp.


ncbi_organism_name: Epilithonimonas vandammei


ncbi_assembly_name: IMG-taxon 2700988693 annotated assembly

ncbi_isolation_source: desert limestone dust from grooves in limestone cliffs

ncbi_organism_name: Geodermatophilus pulveris

ncbi_submitter: DOE - JOINT GENOME INSTITUTE


ncbi_country: France

ncbi_organism_name: Francisella tularensis

ncbi_submitter: ANSES


ncbi_isolation_source: wastewater

ncbi_organism_name: Nitrospira sp.

ncbi_submitter: University of Queensland


ncbi_country: Germany

ncbi_isolation_source: flour/flour products

ncbi_organism_name: Escherichia coli

ncbi_submitter: German Federal Institute for Risk Assessment


ncbi_isolation_source: mouse gut metagenome

ncbi_organism_name: Parabacteroides distasonis

ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_country: France: Besancon

ncbi_isolation_source: Rectal swab

ncbi_organism_name: Acinetobacter baumannii

ncbi_submitter: University Hospital of Besancon


ncbi_organism_name: Streptomyces uncialis

ncbi_submitter: Technical University of Denmark


ncbi_isolation_source: blood sample from patient with bacteremia

ncbi_submitter: University of Maryland

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus aureus;x__Staphylococcus aureus subsp. aureus CIG1242


ncbi_organism_name: Nostoc sp.

ncbi_submitter: Duke University


ncbi_country: USA: South Carolina

ncbi_isolation_source: sputum

ncbi_organism_name: Mycobacterium kubicae

ncbi_submitter: University of Trento


ncbi_organism_name: Geobacteraceae bacterium

ncbi_submitter: The University of Hong Kong


ncbi_isolation_source: Wound; foot

ncbi_organism_name: Providencia rettgeri

ncbi_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


ncbi_country: Belgium: Brussels

ncbi_isolation_source: river water

ncbi_organism_name: Pseudomonas sp. W2Jun17

ncbi_submitter: Institut de Recherche LABIRIS


ncbi_country: USA: Santa Barbara Zoo

ncbi_isolation_source: feces

ncbi_organism_name: Prevotella sp.

ncbi_submitter: University of California, Santa Barbara


ncbi_organism_name: Bifidobacterium bifidum

ncbi_submitter: Federal Research and Clinical Centre of Physical-Chemical Medicine


ncbi_country: Japan

ncbi_isolation_source: Uriue

ncbi_organism_name: Enterobacter hormaechei

ncbi_submitter: Toho University


ncbi_isolation_source: lake water

ncbi_organism_name: Burkholderiaceae bacterium

ncbi_submitter: BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO


ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured Kineothrix sp.

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_country: Peru: Lima

ncbi_organism_name: Mycobacterium tuberculosis

ncbi_submitter: Universidad Peruana Cayetano Heredia


ncbi_organism_name: Anaerolineae bacterium

ncbi_submitter: Second Institute Of Oceanography,MNR


ncbi_organism_name: Salmonella sp. NW950

ncbi_submitter: Sichuan University


ncbi_country: USA: NC

ncbi_isolation_source: environment

ncbi_organism_name: Salmonella enterica

ncbi_submitter: FDA


ncbi_organism_name: Planomicrobium okeanokoites

ncbi_submitter: marine college, shandong university


ncbi_isolation_source: anammox granule sludge

ncbi_organism_name: Anaerolineales bacterium

ncbi_submitter: Chongqing university


ncbi_organism_name: uncultured Lachnospiraceae bacterium


ncbi_organism_name: Alistipes sp.

ncbi_submitter: United States Department of Agriculture - ARS


ncbi_country: USA: New York; Rochester

ncbi_isolation_source: nasopharyngeal

ncbi_organism_name: Streptococcus pneumoniae

ncbi_submitter: Drexel


ncbi_country: Saint Kitts and Nevis

ncbi_isolation_source: animal

ncbi_organism_name: Leptospira borgpetersenii

ncbi_submitter: INDICASAT AIP


ncbi_country: Estonia: Tartumaa; Laeva vald

ncbi_organism_name: Enterococcus faecalis


ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: Yangzhou University


ncbi_country: Switzerland: Kanton Zug

ncbi_organism_name: Escherichia coli

ncbi_submitter: University of Zurich


ncbi_country: USA: Massachusetts; Nahant; Canoe Cove

ncbi_isolation_source: Filtered Seawater; 0.2-1 micron fraction

ncbi_organism_name: Vibrio splendidus

ncbi_submitter: Massachusetts Institute of Technology


ncbi_country: Spain

ncbi_organism_name: Francisella tularensis

ncbi_submitter: ANSES