ncbi_country: China: Sichuan

ncbi_isolation_source: goat

ncbi_organism_name: Mesomycoplasma ovipneumoniae

ncbi_submitter: Southwest University for Nationalities


gtdb_representative: f

gtdb_type_species_of_genus: f

ncbi_assembly_level: Scaffold

ncbi_genome_category: derived from metagenome

ncbi_genome_representation: full

ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured Muribaculaceae bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_assembly_level: Contig

ncbi_country: USA: Knoxville; TN

ncbi_isolation_source: feces extracted directly from colon

ncbi_organism_name: Lawsonibacter sp.

ncbi_submitter: Oak Ridge National Laboratory


ncbi_country: USA: FL; Keys FRRP 1177

ncbi_isolation_source: coral surface mucus layer and tissue

ncbi_organism_name: Pseudoalteromonas sp. Cn5-37

ncbi_submitter: Meyer Microbes Lab


ncbi_country: India: Puttaparthi; CTVS ICU

ncbi_isolation_source: sputum

ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: Sri Sathya Sai Institute of Higher Learning


ncbi_organism_name: Raoultella planticola

ncbi_submitter: Weifang People's Hospital


ncbi_country: Chile: Libertador Bernando O Higgins

ncbi_submitter: Ponitificia Universidad Catolica de Chile

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Enteritidis


gtdb_representative: t

ncbi_country: Sweden: Stordalen Mire

ncbi_isolation_source: permafrost active layer soil

ncbi_organism_name: Syntrophaceae bacterium

ncbi_submitter: Australian Centre for Ecogenomics, The University of Queensland


ncbi_organism_name: Bifidobacterium bifidum

ncbi_submitter: Icahn School of Medicine at Mount Sinai


ncbi_isolation_source: wastewater metagenome

ncbi_organism_name: uncultured Polymorphobacter sp.

ncbi_submitter: European Bioinformatics Institute


ncbi_assembly_level: Chromosome

ncbi_country: USA: Los Angeles

ncbi_isolation_source: feces

ncbi_organism_name: Bacteroides thetaiotaomicron

ncbi_submitter: Washington University in St Louis


ncbi_organism_name: uncultured Clostridia bacterium

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Clostridia;x__environmental samples;s__uncultured Clostridia bacterium


ncbi_country: USA: Wyoming

ncbi_isolation_source: Rumen fluid

ncbi_organism_name: Dialister sp. UBA7259

ncbi_submitter: University of Queensland


ncbi_isolation_source: ruminant gastrointestinal tract

ncbi_organism_name: Prevotella sp.

ncbi_submitter: Nanjing Agricultural University


ncbi_isolation_source: human gut

ncbi_submitter: UNIVERSITY OF NEW SOUTH WALES

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia;s__Blautia massiliensis (ex Durand et al. 2017)


ncbi_country: China

ncbi_isolation_source: Human

ncbi_submitter: University of California at Davis

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Kentucky


ncbi_country: Pakistan: Rawalpindi

ncbi_isolation_source: polluted environment

ncbi_organism_name: Bacillus subtilis

ncbi_submitter: Fatima Jinnah Women University


ncbi_country: Tanzania

ncbi_isolation_source: stool

ncbi_organism_name: Escherichia coli 2-005-03_S1_C1

ncbi_submitter: IGS


ncbi_isolation_source: saline water (ENVO:00002010); including plankton (ENVO:xxxxxxxx)

ncbi_organism_name: Gemmatimonadales bacterium UBA2981


gtdb_type_species_of_genus: t

ncbi_isolation_source: seawater

ncbi_organism_name: Moritella marina ATCC 15381

ncbi_submitter: Iowa State University

ncbi_type_material_designation: assembly from type material


ncbi_isolation_source: mouse gut metagenome

ncbi_organism_name: uncultured Lachnospiraceae bacterium

ncbi_submitter: EMG


ncbi_organism_name: Clostridioides difficile

ncbi_submitter: Toho University


ncbi_organism_name: uncultured Collinsella sp.


ncbi_organism_name: Alphaproteobacteria bacterium

ncbi_submitter: Dekas Lab, Stanford University


ncbi_organism_name: bacterium

ncbi_submitter: CLUE-TERRA


ncbi_organism_name: uncultured Flavobacteriales bacterium

ncbi_submitter: Centre for Microbiome Research

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;x__Bacteroidota/Chlorobiota group;p__Bacteroidota;c__Flavobacteriia;o__Flavobacteriales;x__environmental samples;s__uncultured Flavobacteriales bacterium


ncbi_organism_name: Curtobacterium sp. LFS079

ncbi_submitter: Rutgers University


ncbi_organism_name: Micromonospora sp. NPDC048868

ncbi_submitter: The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology


ncbi_organism_name: Candidatus Fimenecus sp.

ncbi_submitter: Federal Research and Clinical Centre of Physical-Chemical Medicine

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Clostridia;x__Clostridia incertae sedis;g__Candidatus Fimenecus;x__unclassified Candidatus Fimenecus;s__Candidatus Fimenecus sp.


ncbi_assembly_level: Complete Genome

ncbi_organism_name: Roseburia faecis

ncbi_submitter: University of Guelph


ncbi_organism_name: uncultured Gemmatimonadales bacterium

ncbi_submitter: Center for Microbial Communities


ncbi_organism_name: uncultured Peptococcaceae bacterium


ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: ASCENSION


ncbi_organism_name: Trueperella pyogenes

ncbi_submitter: University of Bern


ncbi_organism_name: Burkholderiales bacterium

ncbi_submitter: The Microflora Danica Consortium


ncbi_organism_name: uncultured Planctomycetales bacterium


ncbi_organism_name: Aliarcobacter cryaerophilus

ncbi_submitter: Chinese Center for Disease Control and Prevention


ncbi_organism_name: uncultured Terriglobus sp.

ncbi_submitter: Spribille Lab


ncbi_organism_name: Flavobacterium sp. GSP11

ncbi_submitter: Institute of Microbiology, Chinese Academy of Sciences


ncbi_organism_name: Terriglobia bacterium

ncbi_submitter: Zhejiang University


ncbi_country: China: Shenzhen

ncbi_isolation_source: sediment

ncbi_organism_name: Bacillus timonensis

ncbi_submitter: Peking University Shenzhen Institute


ncbi_assembly_name: freshwater MAG --- KR2_bin-0277

ncbi_isolation_source: lake water

ncbi_organism_name: uncultured Pseudomonadota bacterium

ncbi_submitter: BILS

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;x__environmental samples;s__uncultured Pseudomonadota bacterium


ncbi_assembly_name: freshwater MAG --- Loc090519-8-7m_bin-1584

ncbi_organism_name: uncultured beta proteobacterium


ncbi_organism_name: Lachnospiraceae bacterium

ncbi_submitter: University of Chinese Academy of Sciences


ncbi_organism_name: uncultured Acidobacteriaceae bacterium


ncbi_organism_name: Anaerolineae bacterium

ncbi_submitter: Karlsruhe Institute of Technology


ncbi_country: USA: California; Dairy

ncbi_isolate: swab isolate 1

ncbi_isolation_source: nasopharyngeal

ncbi_organism_name: Mycoplasmopsis bovis

ncbi_strain_identifiers: 2612MB;swab isolate 1

ncbi_submitter: University of California, Davis


ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured Lachnospiraceae bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_isolation_source: blood

ncbi_organism_name: Streptococcus agalactiae

ncbi_submitter: UTHSC/McGovern Medical School


ncbi_organism_name: Yersinia mollaretii

ncbi_submitter: INSTITUT PASTEUR


ncbi_country: Austria: Austrian Alps; Pond-1

ncbi_isolation_source: freshwater

ncbi_organism_name: Polynucleobacter asymbioticus

ncbi_submitter: University of Innsbruck


ncbi_country: Australia: Orange

ncbi_isolation_source: urine

ncbi_organism_name: Escherichia coli

ncbi_submitter: Ausgem


ncbi_organism_name: Neisseria meningitidis

ncbi_strain_identifiers: 22818;Neisseria meningitidis

ncbi_submitter: UNIVERSITY OF LEICESTER


ncbi_assembly_name: freshwater MAG --- Loclat_bin-18414

ncbi_organism_name: Candidatus Falkowbacteria bacterium

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;x__Patescibacteria group;x__Parcubacteria group;p__Candidatus Falkowiibacteriota;x__unclassified Candidatus Falkowbacteria;s__Candidatus Falkowbacteria bacterium


ncbi_country: South Korea: Yeonggwang

ncbi_isolation_source: Potato bacterial wilt

ncbi_organism_name: Ralstonia solanacearum

ncbi_submitter: National Institute of Agricultural Sciences, RDA


ncbi_country: USA:New York City

ncbi_isolation_source: plastic

ncbi_organism_name: Enterobacteriaceae bacterium UBA1640

ncbi_submitter: University of Queensland


ncbi_country: USA: WA

ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: University of Washington


ncbi_country: Canada: Toronto

ncbi_isolation_source: sputum

ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: University of Toronto


ncbi_country: Australia: NSW

ncbi_isolation_source: feces

ncbi_submitter: Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology


ncbi_isolation_source: human feces metagenome

ncbi_organism_name: Phocaeicola coprophilus

ncbi_submitter: EMG


ncbi_isolation_source: throat swab

ncbi_submitter: bioMerieux - La Balme-Les Grottes


ncbi_country: USA: MD

ncbi_organism_name: Bacteroides eggerthii

ncbi_submitter: US Food and Drug Administration


ncbi_organism_name: Chiayiivirga flava

ncbi_refseq_category: reference genome

ncbi_submitter: DOE Joint Genome Institute


ncbi_country: Pacific Ocean: Brothers volcano

ncbi_isolation_source: marine hydrothermal vent

ncbi_organism_name: Helicobacteraceae bacterium

ncbi_submitter: Portland State University


ncbi_organism_name: uncultured Kineothrix sp.


ncbi_country: Australia: Port Phillip Bay

ncbi_isolation_source: Beach sand

ncbi_organism_name: Maribacter sp.

ncbi_submitter: Monash University


ncbi_country: USA: Madison; WI

ncbi_isolation_source: anaerobic bioreactor effluent; solid retention time of 6 days

ncbi_organism_name: Limosilactobacillus oris


ncbi_isolation_source: human feces

ncbi_organism_name: uncultured Roseburia sp.

ncbi_submitter: stanford university school of medicine


ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: Huzhou CDC


ncbi_assembly_name: freshwater MAG --- MJ-time_bin-2460

ncbi_organism_name: uncultured bacterium

ncbi_submitter: BILS


ncbi_organism_name: Bacteroidota bacterium

ncbi_submitter: Watershed Function Science Focus Area

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;x__Bacteroidota/Chlorobiota group;p__Bacteroidota;x__unclassified Bacteroidota;s__Bacteroidota bacterium


ncbi_organism_name: Escherichia coli

ncbi_submitter: Second Affiliated Hospital of Zhejiang University, School of Medicine


ncbi_isolation_source: human gut

ncbi_organism_name: uncultured Bacteroides sp.


ncbi_isolation_source: pig gut metagenome

ncbi_organism_name: uncultured Lachnospiraceae bacterium


ncbi_country: Taiwan

ncbi_submitter: Zhejiang University School of Medicine

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Panama


ncbi_organism_name: Candidatus Eremiobacteraceae bacterium

ncbi_submitter: Zhejiang University

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Vulcanimicrobiota;c__Vulcanimicrobiia;o__Candidatus Eremiobacterales;f__Candidatus Eremiobacteraceae;x__unclassified Candidatus Eremiobacteraceae;s__Candidatus Eremiobacteraceae bacterium


ncbi_organism_name: Vibrio cholerae

ncbi_submitter: Freie Universitaet Berlin


ncbi_organism_name: uncultured Dehalococcoidia bacterium

ncbi_submitter: Centre for Microbiome Research


ncbi_country: Puerto Rico: saltern

ncbi_isolation_source: Filtrate 34% NaCl Saltern Water

ncbi_organism_name: Halobacillus litoralis

ncbi_submitter: UC Davis


ncbi_country: Netherlands

ncbi_submitter: Dutch CPE surveillance study group


ncbi_submitter: German Federal Institute for Risk Assessment


ncbi_isolation_source: Caecum

ncbi_organism_name: uncultured Alistipes sp.

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_country: USA: Knoxville; TN

ncbi_isolation_source: feces extracted directly from colon

ncbi_organism_name: Clostridia bacterium

ncbi_submitter: Oak Ridge National Laboratory


ncbi_organism_name: Candidatus Brevifilum fermentans

ncbi_submitter: CLUE-TERRA


ncbi_organism_name: Turicimonas muris


ncbi_country: Japan

ncbi_isolation_source: gastric biopsies

ncbi_organism_name: Helicobacter pylori

ncbi_submitter: Oita University


ncbi_country: USA: Rifle; CO

ncbi_isolation_source: Rifle well FP-101 under low O2 conditions; 0.2 micron filter; full assembly

ncbi_submitter: Banfield Lab, University of California, Berkeley

ncbi_taxonomy_unfiltered: d__Bacteria;x__delta/epsilon subdivisions;c__Deltaproteobacteria;x__unclassified Deltaproteobacteria;s__Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_42_39


ncbi_country: Spain: Madrid

ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: Hospital Universitario 12 de Octubre


ncbi_submitter: Genomik Solidaritas Indonesia


ncbi_isolation_source: Nakabusa hot spring

ncbi_organism_name: Thermosynechococcus sp. NK55a

ncbi_submitter: PNNL


ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured Treponema sp.


ncbi_organism_name: uncultured Muribaculaceae bacterium


ncbi_isolation_source: sheep gut metagenome

ncbi_organism_name: uncultured Bacteroidales bacterium

ncbi_submitter: EMG

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;x__Bacteroidota/Chlorobiota group;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;x__environmental samples;s__uncultured Bacteroidales bacterium


ncbi_country: France: Besancon

ncbi_isolation_source: Catheter

ncbi_organism_name: Acinetobacter baumannii

ncbi_submitter: University Hospital of Besancon


ncbi_isolation_source: ruminant gastrointestinal tract

ncbi_organism_name: Lachnospiraceae bacterium

ncbi_submitter: Nanjing Agricultural University


ncbi_organism_name: Mesomycoplasma ovipneumoniae

ncbi_submitter: Institute of Microbiology


ncbi_isolation_source: anaerobic bioreactor effluent

ncbi_submitter: DOE Joint Genome Institute


ncbi_isolation_source: sputum

ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: University of Trento


ncbi_isolation_source: chicken caecal content

ncbi_organism_name: Alistipes dispar

ncbi_submitter: Institut National pour la Recherche Agronomique (FRANCE)


ncbi_country: USA: International Space Station

ncbi_isolation_source: PROTECT experiment; Tray 1; Comp 2; dark layer

ncbi_organism_name: Bacillus pumilus

ncbi_submitter: Jet Propulsion Laboratory, California Institute of Technology


ncbi_organism_name: Bacteroides faecis

ncbi_submitter: University of Copenhagen


ncbi_organism_name: Anaerolineae bacterium

ncbi_submitter: Karlsruhe Institute of Technology


ncbi_country: United Kingdom

ncbi_isolation_source: Clinical

ncbi_organism_name: Legionella pneumophila

ncbi_submitter: SC


ncbi_organism_name: Methyloceanibacter sp.

ncbi_submitter: Zhejiang University


ncbi_country: Argentina

ncbi_isolation_source: blood

ncbi_submitter: Universidad El Bosque


ncbi_country: Russia: Baikal lake

ncbi_isolation_source: bottom sediments of Lake Baikal

ncbi_organism_name: Thermaerobacter sp. PB12/4term

ncbi_submitter: ICBFM SB RAS

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Clostridia;o__Eubacteriales;x__Eubacteriales incertae sedis;f__Clostridiales Family XVII. Incertae Sedis;g__Thermaerobacter;x__unclassified Thermaerobacter;s__Thermaerobacter sp. PB12/4term


ncbi_organism_name: Salmonella sp. s29873

ncbi_submitter: Zhejiang university


ncbi_organism_name: Oscillibacter sp.

ncbi_submitter: Oak Ridge National Laboratory


ncbi_organism_name: Streptomyces hydrogenans

ncbi_submitter: The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology


ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_organism_name: Micrococcus yunnanensis

ncbi_strain_identifiers: IEGM 1325

ncbi_submitter: INSTITUTE OF ECOLOGY AND GENETICS OF MICROORGANISMS, URAL BRANCH OF THE RUSSIAN ACADEMY OF SCIENCES


ncbi_organism_name: Yersinia pestis 7338

ncbi_submitter: Beijing Genomics Institute

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Yersinia;x__Yersinia pseudotuberculosis complex;s__Yersinia pestis;x__Yersinia pestis 7338


ncbi_country: Ireland: Cork

ncbi_isolation_source: milk

ncbi_organism_name: Macrococcoides caseolyticum

ncbi_submitter: Teagasc Food research


ncbi_organism_name: Nitrospira sp.


ncbi_organism_name: Clostridioides difficile

ncbi_submitter: Banfield Lab, University of California, Berkeley


ncbi_country: South Korea: Seoul

ncbi_isolation_source: hospital

ncbi_organism_name: Escherichia coli

ncbi_submitter: Seoul Metropolitan Government Research Institute of Public Health and Environment


ncbi_organism_name: Legionella micdadei

ncbi_submitter: Los Angeles County Public Health Lab microbial pathogen submission group


ncbi_isolation_source: mouse gut metagenome

ncbi_organism_name: Bacteroidales bacterium

ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_isolation_source: not available

ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: WTSI


ncbi_country: USA: Wyndmoor; PA

ncbi_isolation_source: Retail chicken

ncbi_organism_name: Campylobacter coli

ncbi_submitter: USDA


ncbi_organism_name: Streptomyces werraensis


ncbi_organism_name: Litchfieldella rifensis

ncbi_strain_identifiers: CECT 7698

ncbi_submitter: Institution of Microbiology, Chinese Academy of Science(WDCM)


ncbi_organism_name: Micromonospora sp. NBC_01405

ncbi_submitter: Technical University of Denmark


ncbi_organism_name: Salmonella sp. NW809

ncbi_submitter: Sichuan University


ncbi_organism_name: Ilumatobacter sp.

ncbi_submitter: German Federation for Biological Data


ncbi_organism_name: Klebsiella sp. K5-312

ncbi_submitter: Institute of Marine research


ncbi_organism_name: Variovorax paradoxus

ncbi_submitter: Aarhus University


ncbi_organism_name: Gemmiger qucibialis

ncbi_submitter: Federal Research and Clinical Centre of Physical-Chemical Medicine


ncbi_organism_name: Brachymonas sp.

ncbi_submitter: University of Waterloo


ncbi_organism_name: Candidatus Adlerbacteria bacterium

ncbi_submitter: EPFL

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;x__Patescibacteria group;x__Parcubacteria group;p__Candidatus Adleribacteriota;x__unclassified Candidatus Adlerbacteria;s__Candidatus Adlerbacteria bacterium


ncbi_country: Pacific Ocean

ncbi_isolation_source: sediment from ferromanganese module field

ncbi_organism_name: Pseudomonadota bacterium

ncbi_submitter: Huazhong Agricultural University


ncbi_organism_name: uncultured Clostridia bacterium

ncbi_submitter: Institut National pour la Recherche Agronomique (FRANCE)


ncbi_organism_name: Anaerolineae bacterium

ncbi_submitter: Karlsruhe Institute of Technology


ncbi_isolation_source: human feces

ncbi_organism_name: uncultured Bacilli bacterium

ncbi_submitter: stanford university school of medicine

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Bacilli;x__environmental samples;s__uncultured Bacilli bacterium


ncbi_country: Australia: Great Barrier Reef

ncbi_organism_name: Gemmatimonadota bacterium

ncbi_submitter: University of Queensland


ncbi_organism_name: Isosphaeraceae bacterium

ncbi_submitter: Research Center of Biotechnology RAS


ncbi_country: Canada: Alberta

ncbi_isolation_source: groundwater

ncbi_organism_name: Actinomycetota bacterium

ncbi_submitter: University of Calgary


ncbi_country: China: Shuikoushan Lead-Zinc Mine; Hunan Province

ncbi_isolation_source: acid mine drainage sediment

ncbi_organism_name: Chloroflexota bacterium

ncbi_submitter: Sun Yat-sen University, Guangzhou


ncbi_organism_name: Pantoea agglomerans

ncbi_submitter: Agriculture and Agri-Food Canada


ncbi_country: Spain: Asturias

ncbi_organism_name: Enterobacter hormaechei

ncbi_submitter: Hospital Universitario Central de Asturias


ncbi_isolation_source: rabbit gut

ncbi_organism_name: uncultured Lachnospiraceae bacterium


ncbi_organism_name: Vibrio parahaemolyticus

ncbi_submitter: University of Southampton


ncbi_isolation_source: human stool

ncbi_organism_name: uncultured Oscillospiraceae bacterium

ncbi_submitter: DOE JGI


ncbi_country: USA: PA

ncbi_isolation_source: intestine mouse

ncbi_submitter: Center for Food Safety and Applied Nutrition

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Enteritidis


ncbi_isolation_source: Faeces

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_isolation_source: not known

ncbi_organism_name: Yersinia enterocolitica

ncbi_submitter: SC


ncbi_country: Canada

ncbi_isolation_source: environmental watersal

ncbi_organism_name: Campylobacter jejuni

ncbi_submitter: Swansea University


ncbi_country: USA: HI

ncbi_isolation_source: Municipal wastewater; Sand Island WWTP

ncbi_submitter: Water Quality and Environmental Biotechnology Lab

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Paratyphi B;x__Salmonella enterica subsp. enterica serovar Java


ncbi_organism_name: uncultured bacterium

ncbi_submitter: Center for Microbial Communities


ncbi_country: Canada: Lacombe

ncbi_isolation_source: feces

ncbi_organism_name: Prevotella sp.


ncbi_organism_name: Catenibacterium sp.

ncbi_submitter: Washington University School of Medicine


ncbi_country: Thailand

ncbi_organism_name: Staphylococcus argenteus


ncbi_country: New Zealand: Waiwera River; Auckland

ncbi_isolation_source: Water column

ncbi_organism_name: Formosa sp.

ncbi_submitter: Handley Lab, University of Auckland


ncbi_organism_name: Holophagae bacterium

ncbi_submitter: Stockholm University


ncbi_isolation_source: human skin

ncbi_organism_name: uncultured Pasteurella sp.

ncbi_submitter: NIH/NHGRI


ncbi_organism_name: Shewanella algae

ncbi_submitter: Sanya Peoples Hospital


ncbi_organism_name: Crocinitomicaceae bacterium

ncbi_submitter: Australian Centre for Ecogenomics


ncbi_country: China: Hunan; Shuikoushan

ncbi_isolation_source: sediment

ncbi_organism_name: Chthoniobacterales bacterium

ncbi_submitter: an eLibrary of Microbial Systematics and Genomics


ncbi_organism_name: Enterococcus faecium T110

ncbi_submitter: SRM University


ncbi_organism_name: Sphingomonadales bacterium

ncbi_submitter: East China Normal University


ncbi_country: Ghana: Pakro

ncbi_isolation_source: wound

ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: Noguchi Memorial Institute for Medical Research, University of Ghana


ncbi_isolation_source: Ocean cavity beneath Ross Ice Shelf

ncbi_organism_name: uncultured Pelagibacteraceae bacterium

ncbi_submitter: UNIVERSITY OF VIENNA

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Alphaproteobacteria;o__Candidatus Pelagibacterales;f__Candidatus Pelagibacteraceae;x__environmental samples;s__uncultured Pelagibacteraceae bacterium


ncbi_assembly_name: Rumen uncultured genome RUG14644

ncbi_isolation_source: cattle rumen

ncbi_organism_name: uncultured Prevotellaceae bacterium

ncbi_submitter: THE ROSLIN INSTITUTE


ncbi_organism_name: Flavobacterium johnsoniae UW101

ncbi_submitter: US DOE Joint Genome Institute


ncbi_organism_name: Corynebacterium pseudotuberculosis

ncbi_submitter: DOE Joint Genome Institute


ncbi_organism_name: uncultured Muribaculaceae bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_isolation_source: human gut

ncbi_organism_name: uncultured Ruminococcus sp.

ncbi_submitter: EMG


ncbi_isolation_source: Freshwater lake

ncbi_organism_name: Akkermansia muciniphila

ncbi_submitter: BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO


ncbi_country: Israel

ncbi_isolation_source: Pond water

ncbi_organism_name: Legionella israelensis

ncbi_strain_identifiers: Bercovier 4

ncbi_submitter: Tel Aviv University


ncbi_isolation_source: soil

ncbi_organism_name: Bacillus atrophaeus

ncbi_submitter: USDA-ARS-NCAUR


ncbi_isolation_source: stool

ncbi_organism_name: Escherichia coli

ncbi_submitter: Yonsei University


ncbi_country: Haiti

ncbi_organism_name: Vibrio cholerae HC-50A2

ncbi_submitter: Institute for Genome Sciences


ncbi_country: Finland

ncbi_isolation_source: Human

ncbi_organism_name: Campylobacter jejuni

ncbi_submitter: University of Helsinki


ncbi_isolation_source: Faeces


ncbi_country: China: Yunnan

ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: The Second Affiliated Hospital of Zhejiang University


ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: United Kingdom Health Security Agency


ncbi_country: USA

ncbi_isolation_source: Human vagina

ncbi_organism_name: Lactobacillus jensenii

ncbi_submitter: Vaginal Microbiome Research Consortium


ncbi_submitter: Centre for Microbiome Research


ncbi_country: Australia: Melbourne

ncbi_isolation_source: BAL

ncbi_organism_name: Enterobacter hormaechei

ncbi_submitter: Monash University


ncbi_country: China: Haizhou Bay Resort; Haitou Town; Ganyu District; Lianyungang City; Jiangsu Province

ncbi_isolation_source: surface water

ncbi_organism_name: Actibacterium sp. XHP0104

ncbi_submitter: Hohai University


ncbi_country: Italy

ncbi_isolation_source: oropharyngeal swab

ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: Istituto Zooprofilattico Sperimentale del Piemonte Liguria e Valle d'Aosta


ncbi_organism_name: Haemophilus parainfluenzae


ncbi_organism_name: Staphylococcus epidermidis

ncbi_submitter: Liverpool School of Tropical Medicine


ncbi_organism_name: uncultured Anaerolineales bacterium


ncbi_isolation_source: respiratory

ncbi_submitter: Walter Reed Army Institute of Research


ncbi_isolation_source: homo

ncbi_submitter: ZHEJIANG UNIVERSITY


ncbi_country: Canada: Waterloo

ncbi_isolation_source: leachate from a composite leachate cistern at an active municipal landfill in Southern Ontario

ncbi_organism_name: Candidatus Cloacimonas sp.

ncbi_submitter: University of Waterloo

ncbi_taxonomy: d__Bacteria;p__Candidatus Cloacimonadota;c__Candidatus Cloacimonadia;o__Candidatus Cloacimonadales;f__Candidatus Cloacimonadaceae;g__Candidatus Cloacimonas;s__

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;p__Candidatus Cloacimonadota;c__Candidatus Cloacimonadia;o__Candidatus Cloacimonadales;f__Candidatus Cloacimonadaceae;g__Candidatus Cloacimonas;x__unclassified Candidatus Cloacimonas;s__Candidatus Cloacimonas sp.


ncbi_country: Australia: Clermont; QLD

ncbi_isolation_source: feces

ncbi_organism_name: Planctomycetaceae bacterium

ncbi_submitter: University of Queensland


ncbi_country: China: Qinghai

ncbi_isolation_source: intestinal content of marmot

ncbi_organism_name: Arthrobacter zhangbolii

ncbi_submitter: Chinese Center For Disease Control And Prevention


ncbi_organism_name: Clostridium sp.

ncbi_submitter: Banfield Lab, University of California, Berkeley


ncbi_organism_name: Nostoc sp.

ncbi_submitter: Duke University


ncbi_country: Italy: Udine

ncbi_isolation_source: blood

ncbi_submitter: Pseudomonas Italian work group


ncbi_organism_name: Shigella sonnei

ncbi_submitter: SC


ncbi_isolation_source: unknown

ncbi_organism_name: uncultured Algibacter sp.

ncbi_submitter: marine college, shandong university


ncbi_isolation_source: Distal colon

ncbi_organism_name: uncultured Alistipes sp.

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_country: Australia: St Marys STP; TAS

ncbi_isolation_source: freshwater

ncbi_organism_name: Microcystis aeruginosa CS-564/01

ncbi_submitter: Commonwealth Scientific and Industrial Research Organisation


ncbi_organism_name: Escherichia coli

ncbi_submitter: UMR PIMIT - Processus infectieux en milieu insulaire tropical


ncbi_organism_name: Winogradskyella sp. A2

ncbi_submitter: Shandong University at Weihai


ncbi_organism_name: uncultured Lachnospiraceae bacterium


ncbi_country: USA: Pittsburgh; Pennsylvania

ncbi_isolation_source: urine

ncbi_organism_name: Citrobacter koseri

ncbi_submitter: University of Pittsburgh


ncbi_organism_name: uncultured Chloroflexia bacterium

ncbi_submitter: Center for Microbial Communities

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Chloroflexota;c__Chloroflexia;x__environmental samples;s__uncultured Chloroflexia bacterium


ncbi_country: South Korea

ncbi_organism_name: Acidovorax sp. HDW3

ncbi_submitter: Kyung Hee University


ncbi_organism_name: Caldimonas sp.

ncbi_submitter: Zhejiang University


ncbi_organism_name: Prevotella sp.

ncbi_submitter: Helmholtz Centre for Infection Research


ncbi_isolation_source: mouse gut metagenome

ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_country: Philippines

ncbi_isolation_source: Not known

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Typhi


ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured Duncaniella sp.


ncbi_organism_name: uncultured Muribaculaceae bacterium


ncbi_organism_name: Anaerococcus vaginalis

ncbi_submitter: URMITE CNRS UMR 6236 IRD 198


ncbi_organism_name: uncultured Mailhella sp.


ncbi_country: USA: Pittsburgh

ncbi_organism_name: Acinetobacter baumannii


ncbi_isolation_source: not provided

ncbi_organism_name: uncultured Wolbachia sp.

ncbi_submitter: Centre for Integrative Biology (CIBIO), University of Trento


ncbi_organism_name: Magnetospirillum sp. UT-4

ncbi_submitter: CNRS


ncbi_country: China: Shanghai

ncbi_isolation_source: sputum

ncbi_organism_name: Mycobacteroides abscessus subsp. abscessus

ncbi_submitter: Shanghai Pulmonary Hospital, Tongji University School of Medicine


ncbi_isolation_source: mastitis

ncbi_submitter: KOlimastIR


ncbi_country: Canada: Toronto

ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: University of Toronto


ncbi_country: Brazil

ncbi_isolation_source: biological fluid or tissue

ncbi_submitter: Center for Food Safety and Applied Nutrition

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Dublin


ncbi_isolation_source: marine water

ncbi_organism_name: uncultured Candidatus Actinomarina sp.

ncbi_submitter: WOODS HOLE OCEANOGRAPHIC INSTITUTION

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Actinomycetota;c__Actinomycetes;x__Candidatus Actinomarinidae;o__Candidatus Actinomarinales;x__Candidatus Actinomarineae;f__Candidatus Actinomarinaceae;g__Candidatus Actinomarina;x__environmental samples;s__uncultured Candidatus Actinomarina sp.


ncbi_organism_name: Escherichia coli

ncbi_submitter: University of Galway


ncbi_organism_name: Citrobacter youngae

ncbi_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


ncbi_organism_name: Candidatus Promineifilaceae bacterium

ncbi_submitter: University of East Anglia

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Chloroflexota;c__Ardenticatenia;o__Candidatus Promineifilales;f__Candidatus Promineifilaceae;x__unclassified Candidatus Promineifilaceae;s__Candidatus Promineifilaceae bacterium


ncbi_isolate: SPRUCE 608

ncbi_organism_name: Minisyncoccia bacterium

ncbi_strain_identifiers: SPRUCE 608

ncbi_submitter: Georgia Institute of Technology

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;x__Patescibacteria group;x__Microgenomates group;p__Minisyncoccota;c__Minisyncoccia;x__unclassified Minisyncoccia;s__Minisyncoccia bacterium


ncbi_organism_name: uncultured Bacteroidaceae bacterium

ncbi_submitter: Centre for Microbiome Research


ncbi_organism_name: uncultured Eggerthella sp.

ncbi_submitter: EMG


ncbi_organism_name: Limosilactobacillus sp.

ncbi_submitter: Wilmar International Limited


ncbi_organism_name: Pandoraea pneumonica

ncbi_submitter: Hainan General Hospital


ncbi_organism_name: Clostridium sp.

ncbi_submitter: Washington University in Saint Louis


ncbi_organism_name: uncultured Alistipes sp.

ncbi_submitter: Christian-Albrechts-University Kiel


ncbi_organism_name: Parasutterella sp.

ncbi_submitter: Federal Research and Clinical Centre of Physical-Chemical Medicine


ncbi_organism_name: Streptomyces smyrnaeus

ncbi_submitter: The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology


ncbi_organism_name: Serratia marcescens

ncbi_submitter: McMaster University


ncbi_organism_name: Salmonella sp. NW205

ncbi_submitter: Sichuan University


ncbi_organism_name: Lachnospiraceae bacterium


ncbi_organism_name: Brevundimonas sp.

ncbi_submitter: Yantai University


ncbi_country: China: Fuxian Lake; Yuxi

ncbi_organism_name: Pseudomonadota bacterium

ncbi_submitter: Nanjing Institute of Geography & Limnology, Chinese Academy of Sciences


ncbi_isolation_source: sheep gut metagenome

ncbi_organism_name: uncultured Clostridia bacterium

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Clostridia;x__environmental samples;s__uncultured Clostridia bacterium


ncbi_organism_name: uncultured Planctomycetales bacterium


ncbi_organism_name: Verrucomicrobiota bacterium

ncbi_submitter: CLUE-TERRA


ncbi_organism_name: Rickettsia conorii subsp. raoultii

ncbi_submitter: Beijing Institute of Microbiology and Epidemiology

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;x__Rickettsieae;g__Rickettsia;x__spotted fever group;s__Rickettsia conorii;sb__Rickettsia conorii subsp. raoultii


ncbi_organism_name: Bacillus sp. NIO_002

ncbi_submitter: CSIR-National Institute of Oceanography

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;x__unclassified Bacillus (in: firmicutes);s__Bacillus sp. NIO_002


ncbi_isolation_source: gut metagenome

ncbi_submitter: European Bioinformatics Institute


ncbi_country: USA: California; Modesto

ncbi_isolation_source: groundwater

ncbi_organism_name: Planctomycetota bacterium

ncbi_submitter: Innovative Genomics Institute


ncbi_organism_name: Megamonas funiformis

ncbi_submitter: Helmholtz Centre for Infection Research


ncbi_organism_name: Phocaeicola vulgatus

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_organism_name: Eubacteriales bacterium

ncbi_submitter: University of Chinese Academy of Sciences


ncbi_organism_name: Sphingomonas sp. PvP055

ncbi_submitter: DOE Joint Genome Institute


ncbi_country: Brazil: Fortaleza

ncbi_isolation_source: feces

ncbi_submitter: LNCC


ncbi_country: China: Zhengzhou

ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: Zhengzhou University


ncbi_organism_name: uncultured Anaerovibrio sp.

ncbi_submitter: EMG


ncbi_country: India

ncbi_isolation_source: blood

ncbi_submitter: Christian Medical College


ncbi_country: United Kingdom: Reading

ncbi_isolation_source: cheese

ncbi_organism_name: Lactiplantibacillus plantarum

ncbi_submitter: University of Reading


ncbi_isolation_source: human gut metagenome

ncbi_organism_name: Neglectibacter timonensis


ncbi_organism_name: Bacillus cytotoxicus

ncbi_strain_identifiers: CVUAS 35361

ncbi_submitter: German Federal Institute for Risk Assessment


ncbi_isolation_source: stool

ncbi_organism_name: Salmonella enterica

ncbi_submitter: California Department of Public Health


ncbi_organism_name: Micromonospora sp. NPDC047467

ncbi_submitter: The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology


ncbi_organism_name: uncultured Oscillospiraceae bacterium


ncbi_organism_name: Lachnospira sp. CLA-JM-H23

ncbi_submitter: RWTH Aachen University Hospital


ncbi_isolation_source: human gut

ncbi_organism_name: Clostridiales bacterium


ncbi_country: Switzerland

ncbi_organism_name: Francisella tularensis subsp. holarctica

ncbi_strain_identifiers: FT 88

ncbi_submitter: Spiez Laboratory


ncbi_organism_name: uncultured Lachnospiraceae bacterium


ncbi_organism_name: Salmonella enterica subsp. enterica serovar Enteritidis

ncbi_submitter: First Affiliated Hospital of Chinese PLA General Hospital


ncbi_country: Peru: Lima

ncbi_isolation_source: patient

ncbi_organism_name: Mycobacterium tuberculosis

ncbi_submitter: CETR, HSPH, Megan Murray, director


ncbi_isolation_source: mouse gut metagenome

ncbi_organism_name: uncultured Clostridium sp.


ncbi_isolation_source: not available: not collected

ncbi_organism_name: Enterococcus faecalis

ncbi_submitter: SC


ncbi_isolation_source: Bronchoalveolar lavage fluid

ncbi_organism_name: Mycobacteroides abscessus

ncbi_submitter: Shanghai Pulmonary Hospital, Tongji University School of Medicine


ncbi_country: China: Shenzhen

ncbi_organism_name: Collinsella sp. AF15-51

ncbi_submitter: BGI


ncbi_isolation_source: human feces metagenome


ncbi_organism_name: uncultured Acidimicrobiaceae bacterium

ncbi_submitter: Center for Microbial Communities


ncbi_country: China: Zhejiang

ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: City University of Hong Kong


ncbi_country: Colombia: Bogota

ncbi_isolation_source: Gastric tissue

ncbi_organism_name: Helicobacter pylori

ncbi_submitter: Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional


ncbi_isolation_source: skin sore / abscess / burns / IV Site

ncbi_organism_name: Streptococcus pyogenes


ncbi_country: Netherlands

ncbi_isolation_source: stable manure

ncbi_organism_name: Escherichia coli

ncbi_submitter: Wageningen University & Research


ncbi_country: Japan

ncbi_isolation_source: honey

ncbi_organism_name: Heyndrickxia oleronia

ncbi_submitter: National Agriculture and Food Research Organization


ncbi_organism_name: Puia sp.

ncbi_submitter: Zhejiang University


ncbi_submitter: Second Affiliated Hospital of Anhui Medical University


ncbi_country: Denmark: Aarhus

ncbi_organism_name: Mammaliicoccus sciuri

ncbi_submitter: Aarhus University


ncbi_organism_name: bacterium

ncbi_submitter: Helmholtz Centre for Infection Research


ncbi_isolation_source: microbes were collected at JL-Dive96-S01

ncbi_organism_name: Rhizobiaceae bacterium

ncbi_submitter: Institute of Deep-sea Science and Engineering, Chinese Academy of Sciences


ncbi_country: United Kingdom

ncbi_organism_name: Campylobacter jejuni


ncbi_organism_name: Prolixibacteraceae bacterium

ncbi_submitter: CLUE-TERRA


ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured Acetatifactor sp.

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_organism_name: Patescibacteria group bacterium

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;x__Patescibacteria group;x__unclassified Patescibacteria group;s__Patescibacteria group bacterium


ncbi_organism_name: Moraxella caprae


ncbi_organism_name: Enterobacter cloacae subsp. cloacae

ncbi_submitter: Faculte de Medecine, Universite Paris-Sud

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Enterobacter;x__Enterobacter cloacae complex;s__Enterobacter cloacae;sb__Enterobacter cloacae subsp. cloacae


ncbi_isolation_source: unknown

ncbi_organism_name: Ligilactobacillus murinus


ncbi_country: USA: Wyoming

ncbi_isolation_source: Aquatic Environment

ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: University of Wyoming


ncbi_country: USA

ncbi_isolation_source: Retail Deli

ncbi_organism_name: Listeria monocytogenes

ncbi_submitter: Cornell University


ncbi_isolation_source: human skin

ncbi_organism_name: uncultured Corynebacterium sp.

ncbi_submitter: NIH/NHGRI


ncbi_organism_name: Pseudomonas viridiflava

ncbi_submitter: MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY


ncbi_country: China

ncbi_isolation_source: blood

ncbi_organism_name: Acinetobacter baumannii

ncbi_submitter: The 6th Affiliated Hospital of Shenzhen University Health Center


ncbi_isolation_source: Unknown

ncbi_organism_name: Streptococcus suis

ncbi_strain_identifiers: LL-Y


ncbi_organism_name: Bordetella pertussis

ncbi_submitter: Centers for Disease Control and Prevention


ncbi_assembly_name: freshwater MAG --- Umea_bin-06477

ncbi_isolation_source: lake water

ncbi_organism_name: uncultured Rhodospirillales bacterium

ncbi_submitter: BILS


ncbi_organism_name: Faecalimonas umbilicata

ncbi_submitter: Washington University in Saint Louis


ncbi_organism_name: Lysobacteraceae bacterium

ncbi_submitter: Helmholtz Centre for Environmental Research - UFZ


ncbi_country: South Korea: Seoul

ncbi_isolation_source: soil from wetland

ncbi_organism_name: Flavobacterium sp. SM15

ncbi_submitter: Hankyong National University


ncbi_assembly_name: F. lacunae YT21-2

ncbi_country: Japan:Kanagawa; Fujisawa

ncbi_isolation_source: fresh water

ncbi_organism_name: Filimonas lacunae

ncbi_submitter: Life Science Reseach Center, College of Bioresource Sciences, Nihon University


ncbi_organism_name: Solirubrobacterales bacterium

ncbi_submitter: Center for Nuclear Energy in Agriculture - University of Sao Paulo


ncbi_country: USA: IA

ncbi_isolation_source: environmental

ncbi_submitter: FDA

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Heidelberg;x__Salmonella enterica subsp. enterica serovar Heidelberg str. 607310-1


ncbi_country: Pacific Ocean: North Pacific Ocean

ncbi_isolation_source: marine water sample

ncbi_organism_name: Acidimicrobiaceae bacterium

ncbi_submitter: Tara Oceans Consortium


ncbi_country: USA: Boston

ncbi_isolation_source: fecal material

ncbi_organism_name: Bacteroides intestinalis

ncbi_submitter: Massachusetts Institute of Technology


ncbi_country: South Africa: THABO MOFUTSANYANA; Free State Province

ncbi_isolation_source: Cows Milk

ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: National Institute for Communicable Diseases


ncbi_submitter: Los Angeles County Public Health Lab microbial pathogen submission group


ncbi_country: Oman

ncbi_isolation_source: sputum

ncbi_organism_name: Mycobacterium tuberculosis

ncbi_submitter: Ministry of Health


ncbi_organism_name: Burkholderia pseudomallei

ncbi_submitter: SC


ncbi_organism_name: uncultured Odoribacter sp.

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_isolation_source: not available

ncbi_organism_name: Klebsiella quasipneumoniae

ncbi_submitter: WTSI


ncbi_organism_name: Escherichia coli

ncbi_submitter: Texas A&M University, College of Veterinary Medicine and Biomedical Sciences


ncbi_country: Norway: Oslofjord Tunnel

ncbi_isolation_source: subsea tunnel biofilm collected in 2016; 2017; 2019 and 2020

ncbi_organism_name: Deltaproteobacteria bacterium

ncbi_submitter: Lund University


ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured Muribaculaceae bacterium


ncbi_organism_name: Alloiococcus sp.

ncbi_submitter: Zhejiang University


ncbi_country: France: Nice

ncbi_isolation_source: Peritoneal fluid

ncbi_organism_name: Acinetobacter baumannii

ncbi_submitter: CHRU Besancon


ncbi_isolation_source: feces

ncbi_organism_name: uncultured Duncaniella sp.


ncbi_country: Switzerland

ncbi_isolation_source: milk

ncbi_organism_name: Lacticaseibacillus paracasei

ncbi_submitter: University of Bern


ncbi_assembly_name: Rumen uncultured genome RUG13893

ncbi_isolation_source: cattle rumen

ncbi_organism_name: uncultured Olsenella sp.

ncbi_submitter: THE ROSLIN INSTITUTE


ncbi_country: USA: Minnesota

ncbi_isolation_source: urine

ncbi_organism_name: Enterobacter hormaechei

ncbi_submitter: University of Minnesota


ncbi_organism_name: Chthoniobacteraceae bacterium


ncbi_country: Italy

ncbi_isolation_source: Laboratory strain

ncbi_submitter: Polytechnic University of Marche Medical School


ncbi_organism_name: Smithella sp.

ncbi_submitter: University of Iowa


ncbi_country: Iran: Karaj

ncbi_isolation_source: rumen

ncbi_organism_name: Prevotella sp.

ncbi_submitter: Baqiyatallah University of Medical Sciences


ncbi_organism_name: Staphylococcus aureus

ncbi_strain_identifiers: ISU 877

ncbi_submitter: USDA-ARS


ncbi_country: USA: NC

ncbi_isolation_source: soil

ncbi_organism_name: Bacillus thuringiensis

ncbi_submitter: UNC Chapel Hill


ncbi_country: Czech Republic

ncbi_isolation_source: puddle

ncbi_organism_name: Laspinema olomoucense D3a

ncbi_submitter: Palacky University in Olomouc


ncbi_isolation_source: marine water

ncbi_organism_name: uncultured Pelagibacteraceae bacterium

ncbi_submitter: WOODS HOLE OCEANOGRAPHIC INSTITUTION


ncbi_country: Germany: Heidelberg

ncbi_isolation_source: lab strain

ncbi_submitter: Heidelberg University Hospital


ncbi_country: China: Hangzhou

ncbi_isolation_source: contaminated soil

ncbi_organism_name: Daejeonella sp. H1SJ63

ncbi_submitter: Chinese Academy of Sciences


ncbi_country: USA: Chicago

ncbi_isolation_source: fecal sample

ncbi_organism_name: Hungatella sp. SL.1.14

ncbi_submitter: University of Chicago


ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: Hospital Universitario Ramon y Cajal (IRYCIS)


ncbi_organism_name: Lentzea sp. NPDC051838

ncbi_submitter: The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology


ncbi_organism_name: Xenorhabdus sp. KK7.4

ncbi_submitter: Goethe University


ncbi_organism_name: Pedobacter cryoconitis

ncbi_submitter: DOE Joint Genome Institute


ncbi_organism_name: uncultured Lachnospiraceae bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_country: South Korea

ncbi_isolation_source: slaughterhouse carcass

ncbi_organism_name: Listeria monocytogenes

ncbi_submitter: Animal and Plant Quarantine Agency


ncbi_country: USA: VA

ncbi_isolation_source: expectorated sputum

ncbi_organism_name: Gemella morbillorum

ncbi_submitter: US Food and Drug Administration


ncbi_country: China: Jiuzhaigou; Sichuan

ncbi_organism_name: Lysinibacillus sp. AR18-8

ncbi_submitter: New Mexico State University


ncbi_isolation_source: lake water

ncbi_organism_name: Actinomycetota bacterium

ncbi_submitter: Institute of Hydrobiology, Department of Aquatic Microbial Ecology, Biology Centre, CAS


ncbi_country: Saudi Arabia: Thuwal; RO plant located on Red Sea

ncbi_isolation_source: biofilm from LB_RO membrane3

ncbi_organism_name: Acidobacteriota bacterium

ncbi_submitter: King Abdullah University of Science and Technology


ncbi_organism_name: Anaerolineae bacterium

ncbi_submitter: Karlsruhe Institute of Technology


ncbi_assembly_name: freshwater MAG --- LaPlata-a_bin-0196

ncbi_organism_name: uncultured Actinomycetes bacterium

ncbi_submitter: BILS


ncbi_organism_name: Campylobacter coli

ncbi_submitter: National Institute for Communicable Disease Control and Prevention


ncbi_organism_name: Citrobacter freundii

ncbi_submitter: University Hospital Basel


ncbi_organism_name: Streptococcus agalactiae

ncbi_strain_identifiers: Pig 11

ncbi_submitter: The Chinese University of Hong Kong


ncbi_organism_name: uncultured delta proteobacterium

ncbi_submitter: Center for Microbial Communities

ncbi_taxonomy_unfiltered: d__Bacteria;x__delta/epsilon subdivisions;c__Deltaproteobacteria;x__environmental samples;s__uncultured delta proteobacterium


ncbi_organism_name: uncultured Pseudomonadota bacterium

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;x__environmental samples;s__uncultured Pseudomonadota bacterium


ncbi_organism_name: Escherichia coli

ncbi_submitter: Leibniz Institute of Photonic Technology


ncbi_organism_name: Mesorhizobium sp.

ncbi_submitter: The Microflora Danica Consortium


ncbi_organism_name: Bacillus velezensis

ncbi_submitter: University of Arizona

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;x__Bacillus subtilis group;x__Bacillus amyloliquefaciens group;s__Bacillus velezensis


ncbi_organism_name: Salmonella enterica subsp. enterica

ncbi_submitter: KEMRI


ncbi_organism_name: Chloroflexota bacterium

ncbi_submitter: Biology Meets Subduction, Deep Carbon Observatory


ncbi_isolation_source: Suspended Particulate Matter (SPM) from the Black Sea western gyre

ncbi_organism_name: Planctomycetota bacterium

ncbi_submitter: Utrecht University


ncbi_country: China: Anhui; Tongling

ncbi_isolation_source: sediment

ncbi_organism_name: Elusimicrobiota bacterium

ncbi_submitter: an eLibrary of Microbial Systematics and Genomics


ncbi_organism_name: Deltaproteobacteria bacterium

ncbi_submitter: Australian Centre for Ecogenomics


ncbi_country: New Zealand: Canterbury region

ncbi_isolation_source: groundwater

ncbi_submitter: The University of Auckland


ncbi_country: Czech Republic: Rimov Reservoir

ncbi_isolation_source: freshwater

ncbi_organism_name: Actinomycetota bacterium

ncbi_submitter: Institute of Hydrobiology, Department of Aquatic Microbial Ecology, Biology Centre, CAS


ncbi_organism_name: Anaerovoracaceae bacterium

ncbi_submitter: University of Chinese Academy of Sciences


ncbi_submitter: Lanzhou Institute of Husbandry and Pharmaceutical Sciences, Chinese Academy of Agricultural Sciences


ncbi_organism_name: Bacteroidota bacterium

ncbi_submitter: GEOMAR Helmholtz Centre for Ocean Research

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;x__Bacteroidota/Chlorobiota group;p__Bacteroidota;x__unclassified Bacteroidota;s__Bacteroidota bacterium


ncbi_isolation_source: mouse gut metagenome

ncbi_organism_name: uncultured Lachnospiraceae bacterium

ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_country: Bangladesh

ncbi_isolation_source: rectal swab

ncbi_organism_name: Enterobacter hormaechei

ncbi_submitter: Cardiff University


ncbi_country: Brazil: Blumenau

ncbi_isolation_source: feces

ncbi_organism_name: Pseudomonadota bacterium

ncbi_submitter: LNCC


ncbi_country: Russia: Kulunda Steppe

ncbi_isolation_source: hypersaline soda lake sediment

ncbi_organism_name: Caldisericota bacterium

ncbi_submitter: Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam


ncbi_country: Denmark: Ejby Moelle; Odense

ncbi_isolation_source: wastewater

ncbi_organism_name: Chitinophagaceae bacterium UBA4412

ncbi_submitter: University of Queensland


ncbi_organism_name: Thermoanaerobacterales bacterium

ncbi_submitter: Helmholtz Centre for Environmental Research - UFZ


ncbi_organism_name: uncultured Syntrophaceae bacterium

ncbi_submitter: Centre for Microbiome Research


ncbi_isolation_source: unknown

ncbi_organism_name: Nitrosomonadaceae bacterium

ncbi_submitter: UNIVERSITY OF JENA


ncbi_country: South Africa: Kwa-Zulu Natal

ncbi_organism_name: Mycobacterium tuberculosis

ncbi_submitter: Emory Rollins School of Public Health


ncbi_country: Ethiopia

ncbi_isolation_source: food

ncbi_submitter: University of California at Davis

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Amager


ncbi_organism_name: uncultured Mailhella sp.


ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: Translational Health Science and Technology Institute


ncbi_country: China: Wenchang

ncbi_isolation_source: estuarine mud [ENVO:00002160]

ncbi_organism_name: Pseudoruegeria sp. HB172150

ncbi_submitter: Hainan Tropical Ocean University


ncbi_organism_name: Acinetobacter pittii

ncbi_submitter: Chinese PLA General Hospital


ncbi_country: Sweden: Stordalen Mire

ncbi_isolation_source: permafrost active layer soil

ncbi_organism_name: Acidimicrobiaceae bacterium

ncbi_submitter: Australian Centre for Ecogenomics, The University of Queensland


ncbi_isolation_source: mangrove soil

ncbi_organism_name: Poseidonocella sp. HB161398

ncbi_submitter: Chinese Academy of Tropical Agricultural Sciences


ncbi_organism_name: Chitinophagales bacterium

ncbi_submitter: East China Normal University


ncbi_country: Mediterranean Sea

ncbi_isolation_source: seawater

ncbi_organism_name: Candidatus Thioglobus sp. TMED218

ncbi_submitter: Tara Oceans Consortium

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;x__Gammaproteobacteria incertae sedis;f__Candidatus Pseudothioglobaceae;g__Candidatus Thioglobus;x__unclassified Candidatus Thioglobus;s__Candidatus Thioglobus sp. TMED218


ncbi_organism_name: Lentisphaeria bacterium

ncbi_submitter: University of Pretoria


ncbi_isolation_source: Faeces

ncbi_organism_name: Bifidobacterium pseudolongum subsp. globosum

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_country: India: Mysore

ncbi_isolation_source: Chicken ceca

ncbi_organism_name: Escherichia coli

ncbi_submitter: University of Hyderabad


ncbi_country: Mexico: Gulf of California; Guaymas Basin

ncbi_isolation_source: microbial mat from hydrothermal sediment

ncbi_organism_name: Thermoanaerobaculales bacterium

ncbi_submitter: Harvard University


ncbi_organism_name: Paenibacillus apiarius

ncbi_submitter: USDA-ARS-NCAUR


ncbi_organism_name: Mycobacterium sp. UNCCL9

ncbi_submitter: DOE Joint Genome Institute


ncbi_country: Australia: Great Barrier Reef; Magnetic Island; Geoffrey Bay

ncbi_isolation_source: coral reef sponge

ncbi_organism_name: Gammaproteobacteria bacterium

ncbi_submitter: James Cook University


ncbi_organism_name: uncultured Muribaculaceae bacterium

ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_country: China: Shenzhen

ncbi_isolation_source: sediment

ncbi_organism_name: Microbacterium paraoxydans

ncbi_submitter: Peking University Shenzhen Institute


ncbi_country: Spain

ncbi_isolation_source: Medical

ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: Instituto de Investigacion Sanitaria y Biomedica de Alicante


ncbi_isolation_source: Feces

ncbi_organism_name: uncultured Muribaculum sp.


ncbi_isolation_source: human gut

ncbi_organism_name: uncultured Barnesiella sp.

ncbi_submitter: EMG


ncbi_country: USA: San Fransisco

ncbi_isolation_source: thermophilic anaerobic digester

ncbi_organism_name: Bacillota bacterium

ncbi_submitter: University of Illinois Urbana-Champaign


ncbi_submitter: U. S. Food and Drug Administraion/NCTR


ncbi_organism_name: Burkholderia ubonensis

ncbi_submitter: Northern Arizona University