ncbi_country: Portugal: Grandola; Herdade da Barroca da Serra

ncbi_isolation_source: forest soil

ncbi_organism_name: Lelliottia aquatilis

ncbi_submitter: Universidade do Minho


gtdb_representative: f

gtdb_type_species_of_genus: f

ncbi_assembly_level: Contig

ncbi_country: USA

ncbi_genome_category: derived from metagenome

ncbi_genome_representation: full

ncbi_isolation_source: stool sample

ncbi_organism_name: Phocaeicola vulgatus

ncbi_submitter: Georgia Institute of Technology


ncbi_assembly_level: Scaffold

ncbi_organism_name: Bacillus licheniformis

ncbi_submitter: Rouen Normandy University


ncbi_country: Russia: Kulunda Steppe

ncbi_isolation_source: hypersaline soda lake sediment

ncbi_organism_name: Desulfobacteraceae bacterium

ncbi_submitter: Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam


gtdb_representative: t

ncbi_country: Australia: Sydney; NSW

ncbi_isolation_source: feces

ncbi_organism_name: Clostridiales bacterium

ncbi_submitter: University of Queensland


ncbi_organism_name: Candidatus Nealsonbacteria bacterium

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;x__Patescibacteria group;x__Parcubacteria group;p__Candidatus Nealsoniibacteriota;x__unclassified Candidatus Nealsonbacteria;s__Candidatus Nealsonbacteria bacterium


ncbi_country: USA: NY

ncbi_isolation_source: 2% fat milk

ncbi_organism_name: Streptococcus parauberis

ncbi_submitter: Norfolk State University


ncbi_country: Viet Nam

ncbi_isolation_source: Unknown

ncbi_organism_name: Streptococcus suis

ncbi_submitter: SC


ncbi_isolation_source: pig gut metagenome

ncbi_organism_name: uncultured Subdoligranulum sp.

ncbi_submitter: EMG


ncbi_country: Canada: Alberta

ncbi_isolation_source: Herd 116

ncbi_organism_name: Staphylococcus equorum

ncbi_strain_identifiers: SNUC 742

ncbi_submitter: University of Calgary


ncbi_assembly_name: freshwater MAG --- MJ1_bin-0047

ncbi_isolation_source: lake water

ncbi_organism_name: uncultured Actinomycetes bacterium

ncbi_submitter: BILS


ncbi_organism_name: Bacteroidota bacterium

ncbi_submitter: BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;x__Bacteroidota/Chlorobiota group;p__Bacteroidota;x__unclassified Bacteroidota;s__Bacteroidota bacterium


ncbi_isolation_source: mouse gut metagenome

ncbi_organism_name: Muribaculaceae bacterium

ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_country: USA: Boston; MA

ncbi_isolation_source: nares

ncbi_organism_name: Staphylococcus aureus M0834

ncbi_submitter: Broad Institute


ncbi_organism_name: uncultured Lachnospiraceae bacterium


ncbi_country: USA: Echo Lake; Montana

ncbi_organism_name: Candidatus Contendobacter sp.

ncbi_submitter: University of Montana

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;x__Gammaproteobacteria incertae sedis;f__Candidatus Competibacteraceae;g__Candidatus Contendibacter;x__unclassified Candidatus Contendobacter;s__Candidatus Contendobacter sp.


ncbi_organism_name: Klebsiella pneumoniae


ncbi_assembly_level: Complete Genome

ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: Technical University of Denmark


ncbi_organism_name: Acidobacteriaceae bacterium

ncbi_submitter: Zhejiang University


ncbi_country: Australia: Melbourne

ncbi_isolation_source: Rectal swab

ncbi_organism_name: Enterobacter hormaechei

ncbi_submitter: Monash University


ncbi_isolation_source: NEUS_F2 leachate from a leachate well at an active municipal landfill in the North Eastern United States

ncbi_organism_name: Petrimonas sp.

ncbi_submitter: University of Waterloo


ncbi_organism_name: Enterococcus faecalis

ncbi_submitter: the seqafrica consortium


ncbi_country: USA: Crystal Geyser near Green River; Utah

ncbi_isolation_source: groundwater

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;x__Patescibacteria group;x__Parcubacteria group;p__Candidatus Nealsoniibacteriota;s__Candidatus Nealsonbacteria bacterium CG_4_8_14_3_um_filter_34_13


ncbi_isolation_source: human gut

ncbi_organism_name: uncultured Collinsella sp.


ncbi_organism_name: uncultured Rhodospirillaceae bacterium

ncbi_submitter: Centre for Microbiome Research


ncbi_country: Australia: Orpheus Island

ncbi_organism_name: Acidimicrobiia bacterium

ncbi_submitter: Australian Centre for Ecogenomics


ncbi_organism_name: Pantoea dispersa

ncbi_submitter: University of Wisconsin-Madison


ncbi_country: South Korea: Wanju-Gun

ncbi_organism_name: Phocaeicola faecicola

ncbi_refseq_category: reference genome

ncbi_submitter: Korean Research Institute of Bioscience and Biotechnology

ncbi_type_material_designation: assembly from type material


ncbi_organism_name: uncultured Eggerthella sp.


ncbi_isolation_source: surface swab

ncbi_organism_name: Pantoea sp. GD03673

ncbi_submitter: Washington University in St. Louis School of Medicine


ncbi_country: China

ncbi_organism_name: Pseudomonas savastanoi pv. phaseolicola

ncbi_strain_identifiers: Pph #13

ncbi_submitter: KU Leuven

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;x__Pseudomonas syringae group;x__Pseudomonas syringae group genomosp. 2;s__Pseudomonas savastanoi;x__Pseudomonas savastanoi pv. phaseolicola


ncbi_country: Bangladesh

ncbi_isolation_source: stool

ncbi_organism_name: Shigella boydii

ncbi_submitter: University of Maryland, School of Medicine


ncbi_organism_name: Gammaproteobacteria bacterium

ncbi_submitter: Watershed Function Science Focus Area


ncbi_organism_name: uncultured Duncaniella sp.

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_isolate: Clostridium perfringens

ncbi_isolation_source: human faecal sample

ncbi_organism_name: Clostridium perfringens

ncbi_strain_identifiers: Clostridium perfringens;Q041.2

ncbi_submitter: Quadram Institute Bioscience


ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: Universiteit Gent


ncbi_organism_name: Coprobacillaceae bacterium

ncbi_submitter: Yonsei University


ncbi_country: China: Jiangxi

ncbi_isolation_source: rare earth elements-acid mine drainage (REEs-AMD) contaminated river water

ncbi_organism_name: Hyphomicrobiales bacterium

ncbi_submitter: Sun Yat-sen University


ncbi_organism_name: Acidaminococcus intestini

ncbi_submitter: Helmholtz Centre for Infection Research


ncbi_country: Australia

ncbi_isolation_source: urine

ncbi_organism_name: Escherichia coli

ncbi_submitter: Monash University


ncbi_isolation_source: Cleanroom

ncbi_organism_name: Bacillus subtilis

ncbi_submitter: Jet Propulsion Laboratory


ncbi_country: Hong Kong

ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: HKU


ncbi_organism_name: Lactococcus sp.

ncbi_submitter: Yunnan Agricultural University


ncbi_country: Atlantic Ocean: Mid-Atlantic Ridge; South

ncbi_isolation_source: marine hydrothermal sulfide sediment TVG12

ncbi_organism_name: Candidatus Kaiserbacteria bacterium

ncbi_submitter: Environmental Microbiology Lab

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;x__Patescibacteria group;x__Parcubacteria group;p__Candidatus Kaiseribacteriota;x__unclassified Candidatus Kaiserbacteria;s__Candidatus Kaiserbacteria bacterium


ncbi_organism_name: Pseudomonas viridiflava

ncbi_submitter: MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY


ncbi_isolation_source: urethra

ncbi_organism_name: Neisseria gonorrhoeae

ncbi_submitter: SC


ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured Lachnospiraceae bacterium


ncbi_organism_name: uncultured Blautia sp.

ncbi_submitter: EMG


ncbi_organism_name: Smithellaceae bacterium

ncbi_submitter: CLUE-TERRA


ncbi_organism_name: Prochlorococcaceae cyanobacterium

ncbi_submitter: The University of Texas at Austin


ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_isolation_source: sputum

ncbi_submitter: Ruijin Hospital


ncbi_country: Kenya: Nairobi

ncbi_submitter: Makerere University


ncbi_organism_name: Lonsdalea quercina

ncbi_submitter: Colorado State University


ncbi_organism_name: Verrucomicrobiia bacterium

ncbi_submitter: Watershed Function Science Focus Area


ncbi_country: South Africa

ncbi_organism_name: Mycobacterium tuberculosis TB_RSA32

ncbi_submitter: Broad Institute


ncbi_country: Poland

ncbi_isolation_source: blood

ncbi_organism_name: Corynebacterium diphtheriae bv. gravis

ncbi_submitter: National Institute of Public Health NIH - NRI


ncbi_organism_name: Marinobacter alexandrii

ncbi_submitter: WELLCOME SANGER INSTITUTE


ncbi_submitter: Institute of Clinical Molecular Biology, University of Kiel, Germany


ncbi_isolation_source: Proximal colon

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_isolation_source: homo

ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: ZHEJIANG UNIVERSITY


ncbi_country: Bulgaria: Black Sea

ncbi_isolation_source: Brackish water; Black Sea St. 307

ncbi_organism_name: Acidovorax sp.

ncbi_submitter: Evolutionary Genomics Group


ncbi_country: France: Landes

ncbi_isolation_source: Poultry Farm

ncbi_organism_name: Clostridium botulinum

ncbi_submitter: Anses


ncbi_country: USA: Pittsburgh

ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: University of Pittsburgh


ncbi_submitter: UNIVERSITY OF WARWICK

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Paratyphi A


ncbi_organism_name: Alistipes sp.

ncbi_submitter: Federal Research and Clinical Centre of Physical-Chemical Medicine


ncbi_organism_name: Aeromicrobium sp.

ncbi_submitter: Tang lab


ncbi_isolation_source: Interal medicine

ncbi_submitter: Guangzhou Medical University


ncbi_organism_name: Giesbergeria sp.

ncbi_submitter: CLUE-TERRA


ncbi_organism_name: uncultured Planctomycetaceae bacterium

ncbi_submitter: Centre for Microbiome Research


ncbi_country: China: Beijing

ncbi_submitter: Beijing Institute of Radiation Medicine


ncbi_country: Bangladesh: Dhaka

ncbi_isolation_source: household water source

ncbi_organism_name: Vibrio cholerae

ncbi_submitter: Univ. of Maryland


ncbi_organism_name: Stenotrophomonas sp.


ncbi_country: USA:Alaska; Seward Peninsula

ncbi_isolation_source: root nodule

ncbi_organism_name: Frankia alni

ncbi_submitter: Next generation Ecosystem Experiment Arctic


ncbi_country: Peru: Puno

ncbi_isolation_source: lungs of dead pneumonia animals

ncbi_organism_name: Pasteurella multocida subsp. multocida

ncbi_strain_identifiers: unmsm

ncbi_submitter: Universidad Nacional Mayor de San Marcos


gtdb_type_species_of_genus: t

ncbi_organism_name: Paenarthrobacter aurescens

ncbi_submitter: WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)


ncbi_organism_name: Serratia sp. root2

ncbi_submitter: Agriculture and Agri-Food Canada

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Serratia;x__unclassified Serratia (in: enterobacteria);s__Serratia sp. root2


ncbi_organism_name: Bdellovibrionales bacterium

ncbi_submitter: WELLCOME SANGER INSTITUTE


ncbi_isolate: metabat2_pooled_metaflye.1746 MAG

ncbi_organism_name: uncultured Blautia sp.

ncbi_strain_identifiers: metabat2_pooled_metaflye.1746 MAG

ncbi_submitter: the roslin institute (university of edinburgh)


ncbi_isolation_source: mouse gut metagenome

ncbi_organism_name: uncultured Porphyromonadaceae bacterium

ncbi_submitter: EMG


ncbi_isolation_source: human gut

ncbi_organism_name: uncultured Alistipes sp.


ncbi_organism_name: Ligaoa zhengdingensis

ncbi_submitter: Icahn School of Medicine at Mount Sinai


ncbi_country: United Kingdom

ncbi_isolation_source: Nasophaynx

ncbi_organism_name: Streptococcus pneumoniae

ncbi_submitter: SC


ncbi_organism_name: Streptococcus suis

ncbi_submitter: University of Zurich


ncbi_country: Philippines

ncbi_isolation_source: soil

ncbi_organism_name: Kibdelosporangium philippinense

ncbi_submitter: MacLea Laboratory


ncbi_organism_name: Bacteroidaceae bacterium

ncbi_submitter: Institute of Clinical Molecular Biology, University of Kiel, Germany


ncbi_isolation_source: chicken caecal content

ncbi_organism_name: uncultured Clostridia bacterium

ncbi_submitter: Institut National pour la Recherche Agronomique (FRANCE)

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Clostridia;x__environmental samples;s__uncultured Clostridia bacterium


ncbi_organism_name: uncultured Oscillospiraceae bacterium


ncbi_organism_name: uncultured Dehalococcoidales bacterium


ncbi_organism_name: Christensenellaceae bacterium

ncbi_submitter: University of British Columbia


ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: University Hospital Basel


ncbi_organism_name: Corallococcus soli

ncbi_submitter: Collection de l'Institut Pasteur


ncbi_organism_name: uncultured Limnohabitans sp.

ncbi_submitter: Centre for Microbiome Research


ncbi_organism_name: Microbacterium sp. u220240902

ncbi_submitter: Utah State University Logan


ncbi_organism_name: uncultured Chitinophagaceae bacterium

ncbi_submitter: Spribille Lab


ncbi_organism_name: Arenicellales bacterium

ncbi_submitter: University of Vienna


ncbi_isolation_source: human feces

ncbi_submitter: stanford university school of medicine


ncbi_country: Mexico: Guaymas Basin; Gulf of California

ncbi_isolation_source: deep-sea hydrothermal vent sediments from dive 4569_2 depth 12-15 cm

ncbi_organism_name: Deltaproteobacteria bacterium

ncbi_submitter: The University of Texas at Austin


ncbi_organism_name: Citrobacter youngae

ncbi_submitter: University Hospital Regensburg


ncbi_organism_name: uncultured Fibrobacter sp.


ncbi_organism_name: uncultured Nitrospiraceae bacterium


ncbi_country: Canada: Vancouver; Saanich Inlet

ncbi_isolation_source: hypoxic seawater

ncbi_organism_name: Gemmatimonadota bacterium

ncbi_submitter: The University of Melbourne


ncbi_organism_name: Terrimesophilobacter sp.

ncbi_submitter: Helmholtz Centre for Environmental Research - UFZ


ncbi_country: Germany

ncbi_isolation_source: dairy farm

ncbi_organism_name: Mammaliicoccus sp. P-M56

ncbi_submitter: German Federal Institute for Risk Assessment


ncbi_organism_name: Achromobacter insuavis

ncbi_submitter: Yunnan Agricultural University


ncbi_isolation_source: Colon

ncbi_organism_name: uncultured Lachnospiraceae bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_country: China: Jiangsu;Nanjing

ncbi_isolation_source: blood

ncbi_organism_name: Serratia marcescens

ncbi_submitter: Nanjing Drum Tower Hospital


ncbi_isolation_source: not known

ncbi_organism_name: Streptococcus agalactiae

ncbi_submitter: SC


ncbi_isolation_source: Blood

ncbi_organism_name: Klebsiella pneumoniae


ncbi_assembly_name: Rumen uncultured genome RUG10137

ncbi_isolation_source: cattle rumen

ncbi_organism_name: uncultured Bacteroidia bacterium

ncbi_submitter: THE ROSLIN INSTITUTE

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;x__Bacteroidota/Chlorobiota group;p__Bacteroidota;c__Bacteroidia;x__environmental samples;s__uncultured Bacteroidia bacterium


ncbi_country: USA: Pittsburgh; Magee-Womens Hospital of UPMC

ncbi_isolation_source: infant feces

ncbi_organism_name: Enterobacter sp.

ncbi_submitter: University of California, Berkeley


ncbi_isolation_source: feces

ncbi_organism_name: uncultured Streptococcus sp.


ncbi_organism_name: Paracoccaceae bacterium

ncbi_submitter: Tsinghua University


ncbi_country: Spain

ncbi_isolation_source: Hospital Universitario Lucus Augusti (Lugo)

ncbi_organism_name: Citrobacter koseri

ncbi_submitter: CNAG-CRG


ncbi_assembly_level: Chromosome

ncbi_organism_name: Bacillus amyloliquefaciens

ncbi_submitter: BIOPHYT

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;x__Bacillus subtilis group;x__Bacillus amyloliquefaciens group;s__Bacillus amyloliquefaciens


ncbi_organism_name: Pseudomonas sp. MM223

ncbi_submitter: center for biotechnology (cebitec), bielefeld university


ncbi_country: Pakistan

ncbi_isolation_source: alcohol foam dispenser in hospital intensive care unit

ncbi_organism_name: Stutzerimonas stutzeri

ncbi_submitter: Washington University in St. Louis School of Medicine


ncbi_organism_name: Candidatus Flavonifractor avicola

ncbi_submitter: Quadram Institutte


ncbi_isolation_source: sea water

ncbi_organism_name: uncultured Pseudomonadales bacterium

ncbi_submitter: MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY


ncbi_country: USA: Delaware Bay

ncbi_isolation_source: Bay warer

ncbi_organism_name: Flavobacteriaceae bacterium

ncbi_submitter: Clemson University


ncbi_isolation_source: human feces metagenome

ncbi_organism_name: Odoribacter splanchnicus

ncbi_submitter: EMG


ncbi_isolation_source: human gut metagenome

ncbi_organism_name: uncultured Bacteroidales bacterium

ncbi_submitter: European Bioinformatics Institute

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;x__Bacteroidota/Chlorobiota group;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;x__environmental samples;s__uncultured Bacteroidales bacterium


ncbi_organism_name: Staphylococcus capitis

ncbi_submitter: Loyola University Chicago


ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured Anaeroplasmataceae bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_country: USA: TX

ncbi_isolation_source: pork

ncbi_submitter: Texas A&M University

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Typhimurium


ncbi_country: Uganda

ncbi_isolation_source: Sputum

ncbi_organism_name: Mycobacterium tuberculosis UT0093

ncbi_submitter: Broad Institute


ncbi_country: Jersey

ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: University of Bath


ncbi_country: USA: Chicago

ncbi_isolation_source: human fecal sample

ncbi_organism_name: Bifidobacterium pseudocatenulatum

ncbi_submitter: University of Chicago


ncbi_country: China: Yunnan

ncbi_isolation_source: rice leaves

ncbi_organism_name: Xanthomonas oryzae pv. oryzae

ncbi_submitter: Huazhong Agricultural University


ncbi_organism_name: Dehalococcoidia bacterium

ncbi_submitter: WELLCOME SANGER INSTITUTE


ncbi_organism_name: Candidatus Cryptobacteroides sp.

ncbi_submitter: Embrapa Pecuaria Sudeste

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;x__Bacteroidota/Chlorobiota group;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;x__Bacteroidales incertae sedis;g__Candidatus Cryptobacteroides;x__unclassified Candidatus Cryptobacteroides;s__Candidatus Cryptobacteroides sp.


ncbi_country: Portugal: Island of Sco Miguel; Azores

ncbi_isolation_source: hot spings runoff

ncbi_organism_name: Truepera radiovictrix DSM 17093

ncbi_submitter: US DOE Joint Genome Institute (JGI-PGF)

ncbi_taxonomy_unfiltered: d__Bacteria;x__Thermotogati;p__Deinococcota;c__Deinococci;o__Trueperales;f__Trueperaceae;g__Truepera;s__Truepera radiovictrix;x__Truepera radiovictrix DSM 17093


ncbi_isolation_source: sputum

ncbi_organism_name: Neisseria sp. HMSC064F03

ncbi_submitter: The Genome Institute at Washington University


ncbi_country: China

ncbi_organism_name: Empedobacter falsenii

ncbi_submitter: The Hong Kong Polytechnic University


ncbi_isolation_source: Caecum

ncbi_organism_name: Lactococcus lactis


ncbi_isolation_source: human skin

ncbi_organism_name: uncultured Corynebacterium sp.

ncbi_submitter: NIH/NHGRI


ncbi_country: USA: Boston

ncbi_isolation_source: fecal material

ncbi_organism_name: Akkermansia muciniphila

ncbi_submitter: Massachusetts Institute of Technology


ncbi_country: Japan

ncbi_isolation_source: feces

ncbi_organism_name: Faecalibacterium sp.

ncbi_submitter: Yonsei University


ncbi_country: New Zealand: Canterbury

ncbi_isolation_source: Shellfish

ncbi_organism_name: Aliarcobacter cryaerophilus

ncbi_submitter: Lincoln University


ncbi_organism_name: Lachnospiraceae bacterium

ncbi_submitter: Helmholtz Centre for Environmental Research - UFZ


ncbi_country: Italy: Trento

ncbi_isolation_source: alpine spring water

ncbi_organism_name: Microbacteriaceae bacterium 3FA27C10

ncbi_submitter: University of Trento


ncbi_country: Russia: Moscow

ncbi_isolation_source: traumatic discharge

ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: Central Research Institute of Epidemiology


ncbi_isolation_source: Freshwater lake

ncbi_organism_name: Chitinophaga pinensis

ncbi_submitter: BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO


ncbi_country: USA: Connecticut; Hamden

ncbi_isolation_source: flower stigma

ncbi_organism_name: Pseudomonas sp. 15A4

ncbi_submitter: Connecticut Agricultural Experiment Station


ncbi_organism_name: Usitatibacter sp.

ncbi_submitter: Universidad Andres Bello, Castro Lab


ncbi_isolation_source: mouse gut metagenome

ncbi_organism_name: Parabacteroides distasonis

ncbi_submitter: EMG


ncbi_country: Germany: Zoo Saarbruecken

ncbi_organism_name: Dialister sp.

ncbi_submitter: Center for Bioinformatics


ncbi_organism_name: Escherichia coli

ncbi_submitter: Lanzhou Institute of Husbandry and Pharmaceutical Sciences of CAAS


ncbi_isolation_source: phyllosphere_metagenome_of_Oryza sativa

ncbi_organism_name: uncultured Sphingomonas sp.

ncbi_submitter: INSTITUTE OF ENVIRONMENTAL BIOTECHNOLOGY, GRAZ UNIVERSITY OF TECHNOLOGY


ncbi_country: Thailand

ncbi_organism_name: Staphylococcus argenteus

ncbi_submitter: SC


ncbi_country: Czech Republic: Prerov

ncbi_submitter: University of Veterinary Sciences


ncbi_organism_name: Vibrio parahaemolyticus

ncbi_submitter: Huzhou CDC


ncbi_country: Canada: Alberta

ncbi_isolation_source: groundwater

ncbi_organism_name: Sulfurimicrobium sp.

ncbi_submitter: University of Calgary


ncbi_organism_name: Salidesulfovibrio brasiliensis JCM 12178

ncbi_submitter: The University of Tokyo


ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured Alistipes sp.

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_isolation_source: ruminant gastrointestinal tract

ncbi_submitter: Nanjing Agricultural University


ncbi_country: Australia: Sydney

ncbi_isolation_source: clinical sample

ncbi_organism_name: Enterobacter hormaechei

ncbi_submitter: University of Oxford


ncbi_country: USA

ncbi_organism_name: Streptococcus suis

ncbi_submitter: University of Minnesota


ncbi_organism_name: Xanthomonas euvesicatoria

ncbi_submitter: Academia Sinica


ncbi_isolation_source: lake water

ncbi_organism_name: Flavobacteriaceae bacterium

ncbi_submitter: BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO


ncbi_organism_name: Escherichia marmotae

ncbi_submitter: Chinese Academy of Agric Sciences


ncbi_organism_name: Chitinophagaceae bacterium


ncbi_organism_name: Bacillota bacterium

ncbi_submitter: University of Waterloo


ncbi_isolation_source: marine water

ncbi_organism_name: uncultured Prochlorococcus sp.

ncbi_submitter: WOODS HOLE OCEANOGRAPHIC INSTITUTION


ncbi_isolation_source: patient

ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: The Second Affiliated Hospital of Zhejiang University School of Medicine


ncbi_country: United Kingdom

ncbi_strain_identifiers: BGSC 4K1

ncbi_submitter: University of Bath

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;x__Bacillus cereus group;s__Bacillus thuringiensis;x__Bacillus thuringiensis serovar morrisoni


ncbi_organism_name: Acidothermaceae bacterium

ncbi_submitter: Zhejiang University


ncbi_organism_name: Escherichia coli A35218R

ncbi_submitter: Washington University


ncbi_organism_name: Bacteriovoracaceae bacterium


ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: Chinese People's Liberation Army General Hospital


ncbi_organism_name: Turicimonas muris

ncbi_submitter: EMG


ncbi_organism_name: uncultured Oscillospiraceae bacterium

ncbi_submitter: Centre for Microbiome Research


ncbi_organism_name: Mycobacterium sp.

ncbi_submitter: The University of Hong Kong


ncbi_isolation_source: pig gut metagenome

ncbi_organism_name: uncultured Mollicutes bacterium

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Mycoplasmatota;c__Mollicutes;x__environmental samples;s__uncultured Mollicutes bacterium


ncbi_isolation_source: blood

ncbi_submitter: OHSU


ncbi_isolation_source: feces

ncbi_organism_name: Escherichia coli

ncbi_submitter: China Agricultural University


ncbi_country: USA: Texas

ncbi_organism_name: Halomonas sp. A11-A

ncbi_submitter: DOE Joint Genome Institute


ncbi_country: Spain: Hospital de Sabadell; Barcelona; Catalonia

ncbi_isolation_source: gastric biopsy

ncbi_organism_name: Helicobacter pylori

ncbi_submitter: Facultat de Farmacia i Ciencies de l'Alimentacio; Universitat de Barcelona


ncbi_organism_name: Methylocella sp.

ncbi_submitter: The Microflora Danica Consortium


ncbi_isolation_source: soil

ncbi_organism_name: Cupriavidus pauculus

ncbi_submitter: Department of Engineering, Graduate School of Integrated Science and Technology, Shizuoka University


ncbi_organism_name: uncultured Lachnospiraceae bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_country: China: Yunnan

ncbi_isolation_source: rice leaves

ncbi_organism_name: Xanthomonas oryzae pv. oryzae

ncbi_submitter: Huazhong Agricultural University


ncbi_country: Australia: Heron Island

ncbi_isolation_source: Coral skeleton

ncbi_organism_name: Clostridia bacterium

ncbi_submitter: The University of Melbourne


ncbi_isolation_source: marine metagenome

ncbi_organism_name: uncultured Pelagibacteraceae bacterium

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Alphaproteobacteria;o__Candidatus Pelagibacterales;f__Candidatus Pelagibacteraceae;x__environmental samples;s__uncultured Pelagibacteraceae bacterium


ncbi_submitter: Kyoto University


ncbi_organism_name: Melissococcus plutonius

ncbi_submitter: Michigan State University


ncbi_organism_name: Vibrio cholerae

ncbi_submitter: University of Central Florida


ncbi_organism_name: uncultured Actinomycetota bacterium

ncbi_submitter: Center for Microbial Communities

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Actinomycetota;x__environmental samples;s__uncultured Actinomycetota bacterium


ncbi_organism_name: Enterobacter intestinihominis

ncbi_submitter: Institut Pasteur


ncbi_organism_name: Miniphocaeibacter sp.


ncbi_organism_name: Citrobacter freundii

ncbi_submitter: University Medicine Greifswald


ncbi_submitter: EMG


ncbi_submitter: Centre for Microbiome Research

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;p__Candidatus Saccharimonadota;x__environmental samples;s__uncultured Candidatus Saccharibacteria bacterium


ncbi_organism_name: Faecalibacterium prausnitzii

ncbi_submitter: Federal Research and Clinical Centre of Physical-Chemical Medicine


ncbi_organism_name: Oscillospiraceae bacterium


ncbi_organism_name: Erwinia amylovora

ncbi_submitter: University of Minho


ncbi_organism_name: Enterococcus lactis

ncbi_submitter: University of Chinese Academy of Sciences


ncbi_organism_name: Brevibacillus laterosporus

ncbi_submitter: USDA-ARS-NCAUR


ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: University of Veterinary Medicine Vienna


ncbi_organism_name: Enterococcus faecalis

ncbi_strain_identifiers: Enterococcus sp.

ncbi_submitter: The First Affiliated Hospital of Zhengzhou University, Zhengzhou, China


ncbi_organism_name: bacterium

ncbi_submitter: Helmholtz Centre for Infection Research


ncbi_organism_name: Solirubrobacterales bacterium

ncbi_submitter: University of South Africa


ncbi_isolation_source: cold seep

ncbi_organism_name: Pirellulales bacterium

ncbi_submitter: Third Institute of Oceanography, Ministry of Natural Resources


ncbi_country: Netherlands

ncbi_isolation_source: CSF

ncbi_organism_name: Haemophilus influenzae

ncbi_submitter: SC


ncbi_isolation_source: mouse gut metagenome

ncbi_organism_name: Bacteroidales bacterium

ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_country: USA: OH

ncbi_isolation_source: environment

ncbi_organism_name: Listeria monocytogenes

ncbi_submitter: FDA/CFSAN


ncbi_country: Pacific Ocean

ncbi_isolation_source: sediment from ferromanganese module field

ncbi_organism_name: Alphaproteobacteria bacterium

ncbi_submitter: Huazhong Agricultural University


ncbi_country: Germany: Greifswald

ncbi_isolation_source: wastewater

ncbi_organism_name: Gemmiger sp.

ncbi_submitter: Genomic and Applied Microbiology & Goettingen Genomics Laboratory

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Clostridia;o__Eubacteriales;x__Eubacteriales incertae sedis;g__Gemmiger;x__unclassified Gemmiger;s__Gemmiger sp.


ncbi_assembly_name: Rumen uncultured genome RUG13602

ncbi_organism_name: uncultured Prevotella sp.

ncbi_submitter: THE ROSLIN INSTITUTE


ncbi_submitter: University of California Davis


ncbi_organism_name: Lachnospiraceae bacterium


ncbi_organism_name: Rubrivivax sp.


ncbi_isolation_source: not known


ncbi_country: South Africa

ncbi_isolation_source: Blood culture

ncbi_submitter: National Institute for Communicable Diseases


ncbi_organism_name: uncultured Hungatella sp.

ncbi_submitter: EMG


ncbi_country: USA: MN

ncbi_organism_name: Bordetella hinzii

ncbi_submitter: Centers for Disease Control and Prevention


ncbi_organism_name: Caldifermentibacillus hisashii

ncbi_submitter: Penn State


ncbi_country: Canada

ncbi_organism_name: Escherichia coli

ncbi_submitter: University of Guelph


ncbi_country: USA: IA

ncbi_organism_name: Bacillus wiedmannii

ncbi_submitter: UNC Chapel Hill


ncbi_country: Japan

ncbi_submitter: Microbiology, Graduate School of Medical Sciences, Kyushu University


ncbi_organism_name: Pseudomonadota bacterium

ncbi_submitter: GEOMAR Helmholtz Centre for Ocean Research


ncbi_country: USA: Rifle; CO

ncbi_isolation_source: Rifle well FP-101 under low O2 conditions; 1.2 micron filter; full assembly

ncbi_submitter: Banfield Lab, University of California, Berkeley


ncbi_organism_name: Providencia rettgeri


ncbi_country: China

ncbi_isolation_source: paddy soil

ncbi_organism_name: Geotalea sp. SG265

ncbi_submitter: Key Laboratory of Soil Environmental Health and Regulation, College of Resources and Environment


ncbi_organism_name: Anaerovoracaceae bacterium

ncbi_submitter: Zhejiang University


ncbi_organism_name: Streptococcus mutans

ncbi_submitter: Peking University School of Stomatology


ncbi_organism_name: Clostridia bacterium

ncbi_submitter: University of Chinese Academy of Sciences


ncbi_organism_name: Rhodobacterales bacterium

ncbi_submitter: University of Michigan


ncbi_organism_name: Bacillus subtilis

ncbi_submitter: Korea Food Research Institute


ncbi_submitter: Centre for Microbiome Research


ncbi_organism_name: Cyanobacteriota bacterium

ncbi_submitter: CSIR-Centre for Cellular and Molecular Biology


ncbi_assembly_name: Unknown Methylococcaceae AM_0244

ncbi_organism_name: Methylococcaceae bacterium

ncbi_submitter: Universidade Federal de Sao Carlos - UFSCar


ncbi_organism_name: Muribaculaceae bacterium

ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_country: South Korea: Seoul

ncbi_isolation_source: blood sample from a 51 year old man who was hospitalized in ICU

ncbi_organism_name: Acinetobacter baumannii

ncbi_submitter: Korea Research Institute of Bioscience and Biotechnology (KRIBB)


ncbi_organism_name: Chthoniobacterales bacterium

ncbi_submitter: East China Normal University


ncbi_country: China: Henan

ncbi_isolation_source: nasal swab

ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: China Agriculture University


ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: Sir Run Run Shaw Hospital


ncbi_organism_name: Prevotella corporis

ncbi_submitter: EMG


ncbi_country: China: Liaoning

ncbi_isolation_source: lung

ncbi_organism_name: Escherichia coli

ncbi_submitter: Institute of Special Animal and Plant Sciences, The Chinese Academy of Agricultural Sciences,


ncbi_isolation_source: Environmental; soil

ncbi_organism_name: Burkholderia ambifaria

ncbi_submitter: CARDIFF SCHOOL OF BIOSCIENCES


ncbi_isolation_source: ruminant gastrointestinal tract

ncbi_organism_name: Alphaproteobacteria bacterium

ncbi_submitter: Nanjing Agricultural University


ncbi_isolation_source: rumen

ncbi_organism_name: Prevotella sp. UBA2878

ncbi_submitter: University of Queensland


ncbi_organism_name: Bacteroides stercoris

ncbi_submitter: Helmholtz Centre for Infection Research


ncbi_country: China: South China Sea

ncbi_isolation_source: deep sea sediment

ncbi_organism_name: Paracoccaceae bacterium

ncbi_submitter: Institute of Oceanology, Chinese Academy of Sciences


ncbi_country: USA: California; Dairy

ncbi_isolate: swab isolate 1

ncbi_isolation_source: nasopharyngeal

ncbi_organism_name: Pasteurella multocida

ncbi_strain_identifiers: 2297PM;swab isolate 1

ncbi_submitter: University of California, Davis


ncbi_organism_name: Xanthomonas nasturtii

ncbi_strain_identifiers: WHRI 10051B

ncbi_submitter: The Xanthomonas Threats project


ncbi_isolation_source: cold seep

ncbi_submitter: Third Institute of Oceanography, Ministry of Natural Resources


ncbi_assembly_name: Rumen uncultured genome RUG11293

ncbi_isolation_source: cattle rumen

ncbi_organism_name: uncultured Lachnospiraceae bacterium

ncbi_submitter: THE ROSLIN INSTITUTE


ncbi_isolation_source: pig gut metagenome

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;x__Cyanobacteriota/Melainabacteria group;p__Candidatus Melainabacteria;x__environmental samples;s__uncultured Candidatus Melainabacteria bacterium


ncbi_isolation_source: Vegetable

ncbi_submitter: SC

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Weltevreden


ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured Muribaculum sp.

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_organism_name: Corynebacterium argentoratense


ncbi_country: USA: San Francisco; California

ncbi_isolation_source: Estuarine surface sediment

ncbi_submitter: University of Texas - Austin, Baker Lab


ncbi_organism_name: Plantibacter sp. MPB07

ncbi_submitter: UAEU


ncbi_organism_name: uncultured Streptococcus sp.


ncbi_country: Italy

ncbi_isolation_source: dairy products

ncbi_organism_name: Lacticaseibacillus zeae

ncbi_submitter: University of Udine


ncbi_country: Brazil: Anavilhanas; AM

ncbi_isolation_source: Trachymyrmex fungus garden

ncbi_organism_name: Comamonas sp. Tr-654

ncbi_submitter: UW-Madison


ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: Tarim University


ncbi_organism_name: Bacillus sonorensis

ncbi_submitter: USDA-ARS-NCAUR


ncbi_country: Sweden: Baltic Sea coastal region; Kalmar Sound

ncbi_isolation_source: seawater

ncbi_submitter: Linnaeus University


ncbi_isolation_source: not provided

ncbi_organism_name: uncultured Wolbachia sp.

ncbi_submitter: Centre for Integrative Biology (CIBIO), University of Trento


ncbi_assembly_name: Rumen uncultured genome RUG10849


ncbi_country: USA

ncbi_isolation_source: eye

ncbi_organism_name: Staphylococcus pseudintermedius

ncbi_submitter: University of Tennessee


ncbi_country: France

ncbi_isolation_source: Pericardial fluid

ncbi_organism_name: Mycoplasmoides pneumoniae

ncbi_submitter: Centre for genomic regulation (CRG)


ncbi_country: United Kingdom

ncbi_isolation_source: feces

ncbi_organism_name: Campylobacter jejuni


ncbi_isolation_source: mouse gut metagenome

ncbi_submitter: EMG


ncbi_organism_name: uncultured Muribaculaceae bacterium

ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_organism_name: Paracoccaceae bacterium

ncbi_submitter: Australian Centre for Ecogenomics


ncbi_isolation_source: BLOOD

ncbi_organism_name: Streptococcus pneumoniae


ncbi_country: Cameroon: Ebogo I; Mbalmayo

ncbi_isolation_source: termite gut

ncbi_organism_name: Heliobacteriaceae bacterium

ncbi_submitter: Max Planck Institute for Terrestrial Microbiology


ncbi_strain_identifiers: ILEF 120 MK

ncbi_submitter: NATIONAL VETERINARY RESEARCH INSTITUTE

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Larochelle


ncbi_isolation_source: rice leaf

ncbi_organism_name: Xanthomonas oryzae

ncbi_submitter: Institute of crop sciences, Chinese academy of agricultural sciences


ncbi_country: Brazil

ncbi_organism_name: Campylobacter jejuni subsp. jejuni

ncbi_submitter: FDA/CFSAN


ncbi_country: USA: Molokai Island

ncbi_organism_name: Candidatus Karelsulcia muelleri

ncbi_strain_identifiers: MIMY

ncbi_submitter: University of California Merced

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;x__Bacteroidota/Chlorobiota group;p__Bacteroidota;c__Flavobacteriia;o__Flavobacteriales;x__Flavobacteriales incertae sedis;g__Candidatus Karelsulcia;s__Candidatus Karelsulcia muelleri


ncbi_organism_name: uncultured Lachnospiraceae bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: University of Pittsburgh School of Medicine


ncbi_isolation_source: Feces

ncbi_submitter: Center for Food Safety and Applied Nutrition

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Enteritidis


ncbi_organism_name: Nitrospinota bacterium

ncbi_submitter: Zhejiang University


ncbi_country: Spain: Cadiz

ncbi_isolation_source: Urine

ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: Hospital Universitario Puerta del Mar


ncbi_organism_name: Brevibacillus porteri

ncbi_submitter: USDA-ARS-NCAUR


ncbi_country: South Africa

ncbi_organism_name: Mycobacterium tuberculosis TB_RSA84

ncbi_submitter: Broad Institute


ncbi_isolate: Stool culture

ncbi_organism_name: Shigella sonnei

ncbi_strain_identifiers: Stool culture

ncbi_submitter: Philipps-Universitat Marburg Center for Synthetic Microbiology (Synmikro) Becker lab


ncbi_country: Canada: Gault Nature Reserve

ncbi_isolation_source: pond H1 freshwater mesocosm in the Large Experimental Array of Ponds platform

ncbi_organism_name: bacterium

ncbi_submitter: University of Montreal


ncbi_submitter: Tel Aviv Sourasky Medical Center


ncbi_organism_name: Eubacteriales bacterium

ncbi_submitter: University of Chinese Academy of Sciences


ncbi_organism_name: Pseudomonas palleroniana

ncbi_submitter: Unversidad Michoacana de San Nicolas de Hidalgo


ncbi_organism_name: uncultured Actinomycetota bacterium

ncbi_submitter: Center for Microbial Communities


ncbi_organism_name: Clostridia bacterium


ncbi_organism_name: Bifidobacterium longum

ncbi_submitter: Federal Research and Clinical Centre of Physical-Chemical Medicine


ncbi_organism_name: Flavobacterium ponti

ncbi_submitter: Institution of Microbiology, Chinese Academy of Science(WDCM)


ncbi_organism_name: Enterobacter hormaechei

ncbi_submitter: Miguel Servet University Hospital


ncbi_submitter: Tibet Agricultural and Animal Husbandry College

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Dublin


ncbi_submitter: Puyang Oil Field General Hospital


ncbi_organism_name: Acinetobacter baumannii

ncbi_submitter: Institut Pasteur


ncbi_organism_name: Arenicellales bacterium

ncbi_submitter: WELLCOME SANGER INSTITUTE


ncbi_isolation_source: marine metagenome

ncbi_organism_name: uncultured Pseudomonadota bacterium

ncbi_submitter: EMG

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;x__environmental samples;s__uncultured Pseudomonadota bacterium


ncbi_country: Brazil: Blumenau

ncbi_organism_name: Pseudomonadota bacterium

ncbi_submitter: LNCC


ncbi_country: Pacific Ocean: Mariana Trench

ncbi_isolation_source: marine sediment

ncbi_organism_name: Chloroflexota bacterium

ncbi_submitter: Shanghai Ocean university


ncbi_organism_name: uncultured Chitinophagaceae bacterium


ncbi_organism_name: uncultured Bacillota bacterium

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;x__environmental samples;s__uncultured Bacillota bacterium


ncbi_isolation_source: marine water

ncbi_organism_name: uncultured SAR86 cluster bacterium

ncbi_submitter: WOODS HOLE OCEANOGRAPHIC INSTITUTION

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;x__Gammaproteobacteria incertae sedis;x__SAR86 cluster;x__environmental samples;s__uncultured SAR86 cluster bacterium


ncbi_isolation_source: lake water

ncbi_organism_name: Anaerolineales bacterium

ncbi_submitter: University of Zurich


ncbi_genome_category: derived from single cell

ncbi_isolation_source: single cell amplified by MDA; feces

ncbi_organism_name: Lachnospiraceae bacterium

ncbi_submitter: Haruko Takeyama Lab., Waseda University


ncbi_country: South Korea: South Sea

ncbi_isolation_source: seawater

ncbi_organism_name: Alphaproteobacteria bacterium HT1-32

ncbi_submitter: Chungbuk national university


ncbi_organism_name: Parcubacteria group bacterium

ncbi_submitter: Linnaeus University

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;x__Patescibacteria group;x__Parcubacteria group;x__unclassified Parcubacteria group;s__Parcubacteria group bacterium


ncbi_organism_name: Aeromonas hydrophila

ncbi_submitter: Shanghai Fisheries Research Institute


ncbi_country: China: Lishu

ncbi_isolation_source: fetilized topsoil

ncbi_organism_name: Chthoniobacterales bacterium

ncbi_submitter: CAU


ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: The University of Hong Kong


ncbi_isolation_source: not known

ncbi_organism_name: Mycobacterium tuberculosis

ncbi_submitter: SC


ncbi_isolation_source: Mariane macroalgea Ulva sp.

ncbi_organism_name: uncultured Roseiflexus sp.

ncbi_submitter: marine college, shandong university


ncbi_country: Spain: Madrid

ncbi_isolation_source: respiratory secretion

ncbi_organism_name: Stenotrophomonas maltophilia

ncbi_submitter: Spanish National Centre for Biotechnology


ncbi_isolation_source: other

ncbi_organism_name: Streptococcus pyogenes


ncbi_organism_name: Salmonella enterica subsp. enterica


ncbi_country: Canada: Alberta

ncbi_isolation_source: groundwater

ncbi_organism_name: Hydrogenophaga sp.

ncbi_submitter: University of Calgary


ncbi_organism_name: Escherichia marmotae

ncbi_submitter: University of Veterinary Sciences Brno


ncbi_country: USA: Florida; Summerland Key

ncbi_isolation_source: sponge tissue

ncbi_organism_name: Anaerolineae bacterium

ncbi_submitter: Stony Brook University


ncbi_country: Australia: Great Barrier Reef

ncbi_organism_name: Gammaproteobacteria bacterium

ncbi_submitter: University of Queensland


ncbi_isolation_source: human feces metagenome

ncbi_organism_name: uncultured Ruminococcus sp.

ncbi_submitter: EMG


ncbi_country: Australia

ncbi_isolation_source: Bean Sprouts

ncbi_organism_name: Lactococcus lactis

ncbi_submitter: The University of Queensland


ncbi_country: China: Jiangxi

ncbi_isolation_source: rare earth elements-acid mine drainage (REEs-AMD) contaminated river water

ncbi_organism_name: Lysobacteraceae bacterium

ncbi_submitter: Sun Yat-sen University


ncbi_country: Slovenia: pig farm Ihan

ncbi_isolation_source: feces from large intestine

ncbi_organism_name: Prevotella sp. P5-126

ncbi_submitter: University of Ljubljana


ncbi_isolation_source: intestinal content

ncbi_organism_name: Muribaculaceae bacterium

ncbi_submitter: ChinaCDC


ncbi_country: United Kingdom

ncbi_isolation_source: feces

ncbi_organism_name: Campylobacter jejuni


ncbi_country: USA

ncbi_isolation_source: commercial nano-particles

ncbi_submitter: NCTR/FDA


ncbi_organism_name: Acinetobacter baumannii

ncbi_submitter: University of Pretoria


ncbi_isolation_source: mouse gut metagenome

ncbi_organism_name: uncultured Lachnospiraceae bacterium


ncbi_country: China: Hubei

ncbi_isolation_source: Rice wine Koji

ncbi_organism_name: Enterococcus lactis

ncbi_submitter: Inner Mongolia Agricultural University


ncbi_organism_name: Bacillus velezensis

ncbi_submitter: Tianjin Agricultural University

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;x__Bacillus subtilis group;x__Bacillus amyloliquefaciens group;s__Bacillus velezensis


ncbi_country: China: Shandong Province

ncbi_isolation_source: soil sample

ncbi_organism_name: Escherichia coli

ncbi_submitter: The First Affiliated Hospital, School of Medicine, Zhejiang University


ncbi_organism_name: Micrococcus luteus

ncbi_submitter: The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology


ncbi_organism_name: uncultured Rhodoferax sp.

ncbi_submitter: WELLCOME SANGER INSTITUTE


ncbi_country: USA: Altavista; VA

ncbi_isolation_source: PCB contaminated wastewater treatment lagoon sediment microcosms

ncbi_organism_name: Parachlamydia sp.

ncbi_submitter: University of Iowa


ncbi_organism_name: Spirillospora sp. NBC_00431

ncbi_submitter: Technical University of Denmark


ncbi_isolation_source: fish gut metagenome

ncbi_organism_name: uncultured Mycoplasma sp.


ncbi_country: Malaysia: Kedah

ncbi_isolation_source: CSF

ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: Institute for medical research


ncbi_country: Indian Ocean

ncbi_isolation_source: deep-sea hydrothermal vent

ncbi_organism_name: Sulfurovum sp.

ncbi_submitter: HKUST


ncbi_organism_name: Polyangiaceae bacterium

ncbi_submitter: CLUE-TERRA


ncbi_organism_name: Bacillus toyonensis

ncbi_submitter: Lycoming College


ncbi_country: China

ncbi_isolation_source: cave

ncbi_organism_name: Domibacillus antri

ncbi_submitter: CSIR-Institute of Microbial Technology


ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured Muribaculum sp.

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_country: Norway: Tautra underwater ridge at Trondheim Fjord

ncbi_organism_name: Streptomyces sp. ADI92-24

ncbi_submitter: Bielefeld University


ncbi_country: Taiwan

ncbi_isolation_source: Nose

ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: Chang Gung Memorial Hospital


ncbi_country: Pakistan

ncbi_isolation_source: dairy Farm

ncbi_submitter: Institute of microbiology University of Agriculture Faisalabad

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;x__Klebsiella/Raoultella group;g__Klebsiella;x__Klebsiella pneumoniae complex;s__Klebsiella quasipneumoniae;sb__Klebsiella quasipneumoniae subsp. similipneumoniae


ncbi_organism_name: Citrobacter sp. S55_ASV_140

ncbi_submitter: Washington University in St. Louis


ncbi_country: Mozambique

ncbi_isolation_source: stool sample

ncbi_organism_name: Megasphaera sp.

ncbi_submitter: Georgia Institute of Technology


ncbi_organism_name: Treponema pallidum

ncbi_submitter: University of Washington Laboratory Medicine


ncbi_country: Israel

ncbi_organism_name: Shigella sonnei

ncbi_submitter: SC


ncbi_isolation_source: stool specimen from a Guillain-Barre syndrome patient

ncbi_organism_name: Campylobacter jejuni HB-CJGB-XWM

ncbi_strain_identifiers: HB-CJGB-XWM

ncbi_submitter: State Key Laboratory for Infectious Disease Prevention and Control, and National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China


ncbi_country: South Korea: Gyeonggi;Yongin

ncbi_isolation_source: rhizosphere of the flower mugunghwa

ncbi_organism_name: Flavobacterium hibisci

ncbi_submitter: Shandong University of Technology


ncbi_organism_name: uncultured Muribaculaceae bacterium


ncbi_organism_name: Streptococcus pyogenes

ncbi_strain_identifiers: Isolate 23

ncbi_submitter: University of Siena


ncbi_country: USA: Minnesota

ncbi_isolation_source: ileum

ncbi_organism_name: Pediococcus acidilactici

ncbi_submitter: University of Minnesota


ncbi_country: South Africa: North West University farm

ncbi_organism_name: Escherichia coli

ncbi_submitter: NORTH-WEST UNIVERSITY


ncbi_isolation_source: ruminant gastrointestinal tract

ncbi_organism_name: Bacteroidaceae bacterium

ncbi_submitter: Nanjing Agricultural University


ncbi_country: South Korea

ncbi_isolation_source: Fermented soybean product

ncbi_organism_name: Ureibacillus chungkukjangi

ncbi_submitter: Virginia Polytechnic Institute and State University


ncbi_country: China: Beijing

ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: Beijing Institute of Genomics


ncbi_country: France: Manche

ncbi_isolation_source: urethral fossa

ncbi_organism_name: Taylorella equigenitalis

ncbi_submitter: Anses, Dozule Laboratory for Equine Diseases


ncbi_isolation_source: mesocosm experiment

ncbi_organism_name: Burkholderiaceae bacterium

ncbi_submitter: biology centre of the czech academy of sciences, institute of hydrobiology


ncbi_organism_name: Flavobacterium cheonhonense

ncbi_submitter: WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)


ncbi_isolation_source: mouse gut metagenome

ncbi_organism_name: uncultured Oscillospiraceae bacterium

ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_organism_name: Rectinema sp.

ncbi_submitter: CLUE-TERRA


ncbi_organism_name: uncultured Candidatus Saccharibacteria bacterium

ncbi_submitter: Centre for Microbiome Research


ncbi_country: USA: Pennsylvania; Pittsburgh

ncbi_isolation_source: Rectal swab

ncbi_organism_name: Citrobacter freundii

ncbi_submitter: University of Pittsburgh School of Medicine


ncbi_isolation_source: Microflora from the gut of a living turban shell

ncbi_organism_name: Vibrio algivorus


ncbi_organism_name: Butyricimonas faecihominis


ncbi_organism_name: Streptosporangiaceae bacterium

ncbi_submitter: Zhejiang University


ncbi_organism_name: Providencia manganoxydans

ncbi_submitter: University of Oxford


ncbi_country: Italy: Panarea

ncbi_isolation_source: red biofilm from hot lake

ncbi_organism_name: Crateriforma conspicua

ncbi_submitter: Radboud Universiteit Nijmegen


ncbi_organism_name: Escherichia coli O121

ncbi_submitter: Department of Bacteriology I, National Institute of Infectious Diseases


ncbi_organism_name: Alistipes sp.


ncbi_country: Finland: Karttula

ncbi_isolation_source: root nodule

ncbi_organism_name: Frankia sp. AiPa1

ncbi_submitter: Texas State University


ncbi_organism_name: uncultured Lachnospiraceae bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_country: Russia: Ussuriysk; Primorsky Krai

ncbi_organism_name: Francisella tularensis subsp. holarctica

ncbi_submitter: Federal Service on Customers’ Rights Protection and Human Well-Being Surveillance


ncbi_isolation_source: human feces metagenome

ncbi_organism_name: uncultured Alistipes sp.

ncbi_submitter: EMG


ncbi_assembly_name: Rumen uncultured genome RUG13834

ncbi_isolation_source: cattle rumen

ncbi_organism_name: uncultured Eubacteriales bacterium

ncbi_submitter: THE ROSLIN INSTITUTE


ncbi_isolation_source: Clinical

ncbi_organism_name: Legionella pneumophila

ncbi_submitter: SC


ncbi_isolation_source: feces

ncbi_organism_name: uncultured Muribaculum sp.


ncbi_country: China: Guangdong

ncbi_isolation_source: Fankou acid mine drainage sediment Core B

ncbi_organism_name: Actinomycetota bacterium

ncbi_submitter: Sun Yat-Sen University


ncbi_country: Brazil: Dourados

ncbi_organism_name: Bacillota bacterium

ncbi_submitter: LNCC


ncbi_organism_name: uncultured Verrucomicrobiota bacterium

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__PVC group;p__Verrucomicrobiota;x__environmental samples;s__uncultured Verrucomicrobiota bacterium


ncbi_organism_name: Yersinia enterocolitica

ncbi_submitter: University of Zurich


ncbi_organism_name: Streptococcus agalactiae

ncbi_submitter: Loyola University Chicago


ncbi_organism_name: Streptomyces sp. NPDC048018

ncbi_submitter: The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology


ncbi_organism_name: Escherichia coli

ncbi_submitter: Lanzhou Institute of Husbandry and Pharmaceutical Sciences, Chinese Academy of Agricultural Sciences


ncbi_organism_name: Agathobaculum butyriciproducens

ncbi_submitter: Federal Research and Clinical Centre of Physical-Chemical Medicine


ncbi_organism_name: Citrobacter amalonaticus

ncbi_submitter: National Centre for Infectious Diseases


ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: University Hospital Basel


ncbi_organism_name: Bifidobacterium adolescentis

ncbi_submitter: The Microflora Danica Consortium


ncbi_organism_name: Agrobacterium sp. ES01

ncbi_submitter: SHANGHAI OCEAN UNIVERSITY


ncbi_submitter: University of British Columbia


ncbi_organism_name: Enterococcus faecalis

ncbi_submitter: Chungbuk National University


ncbi_organism_name: Endozoicomonadaceae bacterium

ncbi_submitter: WELLCOME SANGER INSTITUTE


ncbi_organism_name: Neisseria meningitidis

ncbi_submitter: Los Angeles County Public Health Lab microbial pathogen submission group


ncbi_country: Germany: Zoo of Hamburg

ncbi_isolation_source: Feces of six-years-old elephant

ncbi_organism_name: Firmicutes bacterium UBA1764

ncbi_submitter: University of Queensland

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;x__unclassified Bacillota;s__Firmicutes bacterium UBA1764


ncbi_organism_name: Hyphomonas atlantica

ncbi_submitter: Xiamen University


ncbi_organism_name: uncultured bacterium

ncbi_submitter: EMG


ncbi_country: USA: Tennessee

ncbi_isolation_source: groundwater

ncbi_organism_name: Gammaproteobacteria bacterium

ncbi_submitter: University of Oklahoma


ncbi_country: China

ncbi_organism_name: Lactobacillus helveticus

ncbi_submitter: Inner Mongolia Agricultural University


ncbi_assembly_name: Rumen uncultured genome RUG12195

ncbi_organism_name: uncultured Eubacteriales bacterium

ncbi_submitter: THE ROSLIN INSTITUTE


ncbi_organism_name: Acinetobacter baumannii

ncbi_submitter: MRSN BI Team


ncbi_assembly_name: freshwater MAG --- AM-lipid-01-D3_bin-1021

ncbi_isolation_source: lake water

ncbi_organism_name: uncultured Candidatus Saccharibacteria bacterium

ncbi_submitter: BILS


ncbi_country: USA: Corvallis; Oregon

ncbi_isolation_source: Endosphere of plant Populus trichocarpa BESC137

ncbi_organism_name: Actinobacteria bacterium OV450

ncbi_submitter: Oak Ridge National Lab


ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: CARDIFF UNIVERSITY


ncbi_isolation_source: human gut

ncbi_organism_name: uncultured Veillonellaceae bacterium


ncbi_organism_name: Akkermansia muciniphila


ncbi_organism_name: Lactococcus cremoris

ncbi_submitter: University of Groningen


ncbi_isolation_source: Distal colon

ncbi_organism_name: Bacteroides thetaiotaomicron

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_organism_name: Listeria monocytogenes

ncbi_submitter: University of California at Davis


ncbi_organism_name: Chitinophagaceae bacterium

ncbi_submitter: EPFL


ncbi_assembly_name: PMEN

ncbi_organism_name: Streptococcus pneumoniae

ncbi_submitter: UNIVERSITY OF MANCHESTER


ncbi_country: Japan

ncbi_organism_name: Klebsiella pneumoniae subsp. pneumoniae

ncbi_submitter: Toho University

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;x__Klebsiella/Raoultella group;g__Klebsiella;x__Klebsiella pneumoniae complex;s__Klebsiella pneumoniae;sb__Klebsiella pneumoniae subsp. pneumoniae


ncbi_organism_name: Candidatus Aminicenantia bacterium

ncbi_submitter: Watershed Function Science Focus Area

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;p__Candidatus Aminicenantota;c__Candidatus Aminicenantia;x__unclassified Candidatus Aminicenantia;s__Candidatus Aminicenantia bacterium


ncbi_country: Atlantic Ocean

ncbi_isolation_source: deep sea sediment

ncbi_organism_name: Pseudooceanicola atlanticus

ncbi_submitter: The Third Institute of State Oceanic Administration (SOA)


ncbi_organism_name: Staphylococcus ureilyticus

ncbi_submitter: The First Affiliated Hospital of Zhengzhou University


ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured Lachnospiraceae bacterium


ncbi_country: USA

ncbi_isolation_source: Subhepatic Aspirate

ncbi_submitter: U.S. Food and Drug Administration

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Schwarzengrund


ncbi_organism_name: Vibrio cholerae

ncbi_submitter: University of Abuja


ncbi_isolation_source: sputum

ncbi_organism_name: Acinetobacter baumannii

ncbi_submitter: State Key Laboratory of Pathogen and Biosecurity


ncbi_organism_name: Staphylococcus epidermidis

ncbi_submitter: NEOSTAR_Indo-UK Project on AMR


ncbi_isolation_source: metagenome

ncbi_organism_name: uncultured Pseudomonadota bacterium

ncbi_submitter: addis ababa university


ncbi_country: Thailand

ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: SC


ncbi_country: Canada: Vancouver

ncbi_isolation_source: maternal vaginal swab fluid of a 32 year-old woman on Bifidus selective media agar

ncbi_organism_name: Bifidobacterium breve

ncbi_submitter: University of Saskatchewan


ncbi_isolation_source: Caecum


ncbi_country: USA: Crystal Geyser near Green River; Utah

ncbi_isolation_source: groundwater filtered through a 3.0 um filter

ncbi_organism_name: Candidatus Aquicultor secundus

ncbi_submitter: Banfield Lab, University of California, Berkeley

ncbi_taxonomy: d__Bacteria;p__Actinomycetota;c__Candidatus Aquicultoria;o__Candidatus Aquicultorales;f__Candidatus Aquicultoraceae;g__Candidatus Aquicultor;s__Candidatus Aquicultor secundus

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Actinomycetota;c__Candidatus Aquicultoria;o__Candidatus Aquicultorales;f__Candidatus Aquicultoraceae;g__Candidatus Aquicultor;s__Candidatus Aquicultor secundus


ncbi_organism_name: Pseudomonas viridiflava

ncbi_submitter: MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY


ncbi_country: United Kingdom: York

ncbi_isolation_source: Independently evolved isolated clone of PA01 monocultured in 8 g/ml imipenem treated Synthetic Cystic Fibrosis Media for 24 days

ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: University of Warwick


ncbi_country: China: Nanjing

ncbi_isolate: new MAG-199

ncbi_isolation_source: bioreactor sludge

ncbi_organism_name: Accumulibacter sp.

ncbi_strain_identifiers: new MAG-199

ncbi_submitter: Micoorganism

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Betaproteobacteria;x__Betaproteobacteria incertae sedis;g__Candidatus Accumulibacter;x__unclassified Candidatus Accumulibacter;s__Accumulibacter sp.


ncbi_country: Mozambique

ncbi_isolation_source: stool sample

ncbi_organism_name: Prevotella sp.

ncbi_submitter: Georgia Institute of Technology


ncbi_organism_name: Trinickia sp. EG282A

ncbi_submitter: The James Hutton Institute


ncbi_organism_name: Escherichia coli

ncbi_submitter: Jiangxi Academy of Agricultural Sciences


ncbi_submitter: Medical Mycology Research Center


ncbi_isolation_source: feces

ncbi_organism_name: uncultured Duncaniella sp.

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_organism_name: uncultured Odoribacter sp.


ncbi_country: Netherlands

ncbi_isolation_source: stool

ncbi_strain_identifiers: STEC 2236

ncbi_submitter: University of Groningen, University Medical Center Groningen


ncbi_organism_name: Gammaproteobacteria bacterium

ncbi_submitter: concordia university


ncbi_assembly_name: SPADES assembly of Enterobacter cloacae ND8

ncbi_isolation_source: tissues

ncbi_submitter: JCVI

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Enterobacter;x__Enterobacter cloacae complex;s__Enterobacter hormaechei;sb__Enterobacter hormaechei subsp. xiangfangensis


ncbi_organism_name: Burkholderiales bacterium

ncbi_submitter: Tongji University


ncbi_organism_name: uncultured Lachnospiraceae bacterium


ncbi_submitter: Weifang People's Hospital


ncbi_organism_name: Enterobacter cloacae subsp. cloacae

ncbi_submitter: Faculte de Medecine, Universite Paris-Sud

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Enterobacter;x__Enterobacter cloacae complex;s__Enterobacter cloacae;sb__Enterobacter cloacae subsp. cloacae


ncbi_organism_name: Shewanella xiamenensis

ncbi_submitter: Soochow University


ncbi_assembly_name: freshwater MAG --- Umea3p2_bin-1342

ncbi_isolation_source: lake water

ncbi_organism_name: uncultured Ferrovum sp.

ncbi_submitter: BILS


ncbi_country: China: Hangzhou

ncbi_organism_name: Acinetobacter baumannii

ncbi_submitter: Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University


ncbi_organism_name: Lactobacillus taiwanensis


ncbi_isolation_source: sulfonamide-stimulated enrichment

ncbi_organism_name: Paenarthrobacter sp. SD-1

ncbi_submitter: Chinese Academy of Sciences


ncbi_organism_name: Marinobacter sp. 3-2

ncbi_submitter: DOE Joint Genome Institute


ncbi_organism_name: Streptomyces sp. NPDC057002

ncbi_submitter: The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology


ncbi_organism_name: Enterococcus sp. HY326

ncbi_submitter: Chinese Center for Disease Control and Prevention


ncbi_assembly_name: Isolate 16

ncbi_submitter: Kalmar county hospital


ncbi_organism_name: Prevotella sp.

ncbi_submitter: Helmholtz Centre for Infection Research


ncbi_country: Australia: Monaro; NSW

ncbi_organism_name: Oscillospiraceae bacterium

ncbi_submitter: University of Queensland


ncbi_isolation_source: mouse gut metagenome

ncbi_submitter: EMG


ncbi_country: China:Qinghai Province

ncbi_organism_name: Homoserinimonas hongtaonis

ncbi_submitter: Chinese center for disease control and prevention


ncbi_country: Lebanon

ncbi_isolation_source: clinical

ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: Lebanese American University


ncbi_isolation_source: anal swab

ncbi_organism_name: Escherichia coli

ncbi_submitter: The Second Affiliated Hospital of Zhejiang University School of Medicine


ncbi_country: Taiwan

ncbi_isolation_source: wound

ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: Chang Gung Memorial Hospital


ncbi_organism_name: Actinomycetota bacterium

ncbi_submitter: GEOMAR Helmholtz Centre for Ocean Research


ncbi_isolation_source: Blood

ncbi_organism_name: Streptococcus pneumoniae

ncbi_submitter: SC


ncbi_country: Denmark: Copenhagen

ncbi_isolation_source: blood

ncbi_organism_name: Streptococcus oralis

ncbi_submitter: Region Zealand


ncbi_organism_name: Enterococcus faecalis

ncbi_submitter: Technical University of Munich


ncbi_country: USA: IA

ncbi_isolation_source: environmental

ncbi_submitter: FDA

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Heidelberg;x__Salmonella enterica subsp. enterica serovar Heidelberg str. 622737-21


ncbi_organism_name: Shewanella sp.

ncbi_submitter: University of Waterloo


ncbi_country: China: Taiwan;Kueishan Island

ncbi_isolation_source: hydrothermal vent sediment

ncbi_organism_name: Bacteroidota bacterium

ncbi_submitter: Shanghai Ocean University

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;x__Bacteroidota/Chlorobiota group;p__Bacteroidota;x__unclassified Bacteroidota;s__Bacteroidota bacterium


ncbi_isolation_source: soil

ncbi_organism_name: Pseudomonas chlororaphis

ncbi_submitter: Henan Agricultural University


ncbi_organism_name: Neisseria subflava

ncbi_submitter: Wellcome Sanger Institute


ncbi_country: France

ncbi_submitter: Faculte de Medecine, Universite Paris-Sud


ncbi_organism_name: Spirochaetaceae bacterium

ncbi_submitter: Instituto de Ecologia (Universidad Nacional Autonoma de Mexico)


ncbi_organism_name: Acinetobacter sp.

ncbi_submitter: Yunnan Agricultural University


ncbi_country: China: Qujing; Yuan Province

ncbi_organism_name: Bradyrhizobium japonicum

ncbi_submitter: Institute of Agricultural Resources and Agricultural Regional Planning


ncbi_country: Australia: Ulupna; NSW

ncbi_organism_name: Bacillota bacterium

ncbi_submitter: University of Queensland


ncbi_organism_name: Acidimicrobiia bacterium

ncbi_submitter: Center for Genome Regulation (CRG)


ncbi_organism_name: Enterococcus sp. DIV1206

ncbi_submitter: Broad Institute


ncbi_organism_name: Streptomyces sp. NPDC001599

ncbi_submitter: The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology


ncbi_organism_name: Apilactobacillus kunkeei

ncbi_submitter: Technical University of Denmark


ncbi_organism_name: Rubripirellula sp.

ncbi_submitter: Monash University


ncbi_organism_name: Campylobacter coli

ncbi_submitter: Comenius University Science Park


ncbi_organism_name: Acinetobacter guillouiae

ncbi_submitter: Universidad de Leon


ncbi_organism_name: Escherichia coli

ncbi_submitter: Tokyo Medical and Dental University


ncbi_organism_name: uncultured Actinomycetes bacterium

ncbi_submitter: Center for Microbial Communities


ncbi_submitter: Centre for Microbiome Research


ncbi_organism_name: Rickettsia aeschlimannii

ncbi_submitter: Beijing Institute of Microbiology and Epidemiology


ncbi_organism_name: Nitrospinaceae bacterium

ncbi_submitter: Princeton University


ncbi_organism_name: Gemmatimonadales bacterium

ncbi_submitter: University of Waterloo


ncbi_organism_name: uncultured Hyphomicrobiaceae bacterium


ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;p__Candidatus Saccharimonadota;x__environmental samples;s__uncultured Candidatus Saccharibacteria bacterium


ncbi_organism_name: uncultured Nitrosomonas sp.


ncbi_organism_name: Enterococcus sp. G203Y

ncbi_submitter: Ondokuz Mayis University


ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: National Centre for Infectious Diseases


ncbi_organism_name: uncultured Draconibacterium sp.


ncbi_organism_name: Streptomyces sp. NPDC059474


ncbi_country: Brazil: Blumenau

ncbi_organism_name: Pseudomonadota bacterium

ncbi_submitter: LNCC


ncbi_isolation_source: human gut

ncbi_organism_name: uncultured bacterium

ncbi_submitter: EMG


ncbi_country: Russia: Kulunda Steppe

ncbi_isolation_source: hypersaline soda lake sediment

ncbi_organism_name: Dehalococcoidia bacterium

ncbi_submitter: Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam


ncbi_country: Australia: Davies Reef

ncbi_organism_name: Bacteroidota bacterium

ncbi_submitter: Australian Centre for Ecogenomics


ncbi_assembly_name: freshwater MAG --- LaPlata_bin-0274

ncbi_organism_name: uncultured Anaerolineae bacterium

ncbi_submitter: BILS

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Chloroflexota;c__Anaerolineae;x__environmental samples;s__uncultured Anaerolineae bacterium


ncbi_organism_name: uncultured Frigidibacter sp.


ncbi_submitter: Fujita Health University School of Medicine

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Enterobacter;x__Enterobacter cloacae complex;s__Enterobacter hormaechei;sb__Enterobacter hormaechei subsp. hoffmannii


ncbi_organism_name: Candidatus Puniceispirillales bacterium

ncbi_submitter: Southern University of Science and Technology

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Alphaproteobacteria;o__Candidatus Puniceispirillales;x__unclassified Candidatus Puniceispirillales;s__Candidatus Puniceispirillales bacterium


ncbi_submitter: Fudan University


ncbi_isolation_source: Faeces

ncbi_organism_name: Christensenellaceae bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_country: Canada

ncbi_organism_name: Escherichia coli

ncbi_submitter: Canadian Food Inspection Agency