ncbi_isolation_source: ruminant gastrointestinal tract

ncbi_organism_name: Kiritimatiellia bacterium

ncbi_submitter: Nanjing Agricultural University


gtdb_representative: f

gtdb_type_species_of_genus: f

ncbi_assembly_level: Scaffold

ncbi_genome_category: derived from metagenome

ncbi_genome_representation: full

ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured Lachnospiraceae bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_assembly_level: Contig

ncbi_country: China

ncbi_organism_name: Diaminobutyricimonas sp. TR449

ncbi_submitter: Chinese Center for Disease Control and Prevention


ncbi_country: USA: Maywood; IL

ncbi_isolation_source: Urine

ncbi_organism_name: Lactobacillus iners

ncbi_submitter: Loyola University Chicago


ncbi_assembly_level: Complete Genome

ncbi_organism_name: Pantoea agglomerans

ncbi_submitter: USDA-ARS


ncbi_organism_name: Neisseria meningitidis

ncbi_submitter: Pfizer


ncbi_country: USA

ncbi_organism_name: Bifidobacterium animalis

ncbi_submitter: Icahn School of Medicine


ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: Noguchi Memorial Institute for Medical Research


ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: Delaware Public Health Lab


gtdb_representative: t

ncbi_isolation_source: human gut

ncbi_organism_name: uncultured bacterium

ncbi_submitter: EMG


ncbi_organism_name: Patescibacteria group bacterium

ncbi_submitter: Colorado State University

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;x__Patescibacteria group;x__unclassified Patescibacteria group;s__Patescibacteria group bacterium


ncbi_organism_name: Thomasclavelia sp.

ncbi_submitter: Washington University in Saint Louis


ncbi_submitter: Center for Microbial Communities


ncbi_organism_name: Dorea longicatena

ncbi_submitter: Federal Research and Clinical Centre of Physical-Chemical Medicine


ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: national health research institutes


ncbi_organism_name: Acinetobacter baumannii

ncbi_submitter: Shenzhen University


ncbi_isolate: AOP43_C2_surf _bin _12

ncbi_organism_name: Galactobacter sp.

ncbi_strain_identifiers: AOP43_C2_surf _bin _12

ncbi_submitter: Genoscope


ncbi_organism_name: Akkermansia muciniphila


ncbi_submitter: Centre for Microbiome Research


ncbi_organism_name: Parabacteroides distasonis

ncbi_submitter: The Edison Family Center of Genome Sciences and Systems Biology


ncbi_isolation_source: Caecum

ncbi_organism_name: uncultured Clostridia bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Clostridia;x__environmental samples;s__uncultured Clostridia bacterium


ncbi_organism_name: bacterium

ncbi_submitter: Institute of Clinical Molecular Biology, University of Kiel, Germany


ncbi_assembly_name: freshwater MAG --- Loc090907-8m_bin-552

ncbi_isolation_source: lake water

ncbi_submitter: BILS


ncbi_isolation_source: cold seep

ncbi_organism_name: Elusimicrobiota bacterium

ncbi_submitter: Third Institute of Oceanography, Ministry of Natural Resources


ncbi_assembly_name: freshwater MAG --- Umea1_bin-3824

ncbi_organism_name: uncultured Burkholderiales bacterium


ncbi_country: Pakistan

ncbi_isolation_source: stool

ncbi_organism_name: Escherichia coli

ncbi_submitter: University of Maryland, School of Medicine


ncbi_organism_name: uncultured Lachnospiraceae bacterium


ncbi_isolation_source: blood sample from patient with bacteremia

ncbi_submitter: University of Maryland

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus aureus;x__Staphylococcus aureus subsp. aureus CIG1214


ncbi_organism_name: uncultured Oscillospiraceae bacterium


ncbi_organism_name: Ruminococcus sp.

ncbi_submitter: Nanjing Agricultural University


ncbi_country: USA: Virginia

ncbi_isolation_source: urine

ncbi_submitter: Walter Reed Army Institute of Research


ncbi_country: China: Shenzhen

ncbi_isolation_source: feces

ncbi_organism_name: Ruminococcus sp. AM41-2AC

ncbi_submitter: BGI


ncbi_country: Japan

ncbi_isolation_source: Plant material

ncbi_organism_name: Pseudomonas syringae pv. castaneae

ncbi_strain_identifiers: CFBP 4217

ncbi_submitter: University of Edinburgh

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;x__Pseudomonas syringae group;x__Pseudomonas syringae group genomosp. 1;s__Pseudomonas syringae;x__Pseudomonas syringae group pathovars incertae sedis;x__Pseudomonas syringae pv. castaneae


ncbi_organism_name: uncultured Bacilli bacterium

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Bacilli;x__environmental samples;s__uncultured Bacilli bacterium


ncbi_organism_name: Helicobacter pullorum

ncbi_submitter: University of Antwerp, Belgium


ncbi_country: China: Zhejiang

ncbi_organism_name: Enterobacter hormaechei

ncbi_submitter: City University of Hong Kong Shenzhen Research Institute


ncbi_organism_name: uncultured Alistipes sp.


ncbi_country: USA:New York; Inwood

ncbi_isolation_source: household surface

ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: SC


ncbi_organism_name: uncultured Muribaculaceae bacterium


ncbi_submitter: University of California at Davis

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. houtenae;x__Salmonella enterica subsp. houtenae serovar 50:g,z51:-


ncbi_organism_name: Streptococcus pneumoniae

ncbi_submitter: WELLCOME SANGER INSTITUTE


ncbi_country: South Africa: Kwa-Zulu Natal

ncbi_organism_name: Mycobacterium tuberculosis

ncbi_submitter: Emory Rollins School of Public Health


ncbi_country: Brazil

ncbi_isolation_source: cerebrospinal fluid

ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: University of Pittsburgh School of Medicine


ncbi_country: Canada: Alberta

ncbi_isolation_source: food

ncbi_organism_name: Listeria monocytogenes

ncbi_submitter: University of British Columbia


ncbi_organism_name: uncultured Desulfovibrio sp.

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_country: South Africa: Bushbuckridge; Mpumalanga

ncbi_organism_name: Clostridia bacterium

ncbi_submitter: Stanford University School of Medicine


ncbi_isolation_source: marine metagenome

ncbi_organism_name: uncultured Ilumatobacter sp.

ncbi_submitter: European Bioinformatics Institute


ncbi_organism_name: Serratia grimesii

ncbi_submitter: Kazan (Volga region) Federal University


ncbi_country: USA:Florida; Stan Blum Boat Ramp

ncbi_organism_name: Micromonospora sp. WMMC241

ncbi_submitter: University of Wisconsin-Madison


ncbi_organism_name: Muribaculaceae bacterium

ncbi_submitter: Institute of Clinical Molecular Biology, University of Kiel, Germany


ncbi_isolation_source: sputum

ncbi_submitter: Toho university


ncbi_isolation_source: pus

ncbi_organism_name: Streptococcus canis

ncbi_submitter: Laboratory of Infectious Diseases, Kitasato Institute for Life Sciences, Kitasato University


ncbi_country: USA: Texas

ncbi_organism_name: Streptococcus equi

ncbi_submitter: Texas A&M University


ncbi_organism_name: Phocaeicola vulgatus

ncbi_submitter: University of Copenhagen


ncbi_isolation_source: NEUS_F2 leachate from a leachate well at an active municipal landfill in the North Eastern United States

ncbi_organism_name: Lentisphaeria bacterium

ncbi_submitter: University of Waterloo


ncbi_organism_name: Actinomycetales bacterium

ncbi_submitter: East China Normal University


ncbi_country: Ghana:Kassena Nankana District

ncbi_isolation_source: CSF

ncbi_organism_name: Neisseria meningitidis

ncbi_submitter: SC


ncbi_country: Netherlands: Oosterschelde estury; Lokkersnol

ncbi_organism_name: Alphaproteobacteria bacterium

ncbi_submitter: Uppsala University


ncbi_isolation_source: Faeces

ncbi_organism_name: Christensenellaceae bacterium


ncbi_country: USA: Boston; MA

ncbi_isolation_source: fluid

ncbi_organism_name: Staphylococcus aureus M1362

ncbi_submitter: Broad Institute


ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: Medical Mycology Research Center


ncbi_organism_name: Bifidobacterium longum

ncbi_submitter: Beijing YuGen Pharmaceutical Co., Ltd


ncbi_organism_name: Enterobacter cloacae

ncbi_submitter: Temasek Life Sciences Laboratory Limited


ncbi_country: China: Malan

ncbi_organism_name: Rufibacter sp. LB8

ncbi_submitter: BGI-Qingdao


ncbi_country: USA: PA

ncbi_isolation_source: intestine mouse

ncbi_submitter: Center for Food Safety and Applied Nutrition

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Enteritidis


ncbi_isolation_source: marinated quail leg

ncbi_organism_name: Salmonella enterica subsp. enterica

ncbi_submitter: ANSES


ncbi_organism_name: Aeromonas salmonicida

ncbi_submitter: University of Chinese Academy of Sciences


ncbi_organism_name: Lysobacteraceae bacterium

ncbi_submitter: Helmholtz Centre for Environmental Research - UFZ


ncbi_country: China: Shanghai

ncbi_organism_name: Stenotrophomonas maltophilia

ncbi_strain_identifiers: DHHJ

ncbi_submitter: Donghua University


ncbi_organism_name: Candidatus Krumholzibacteriia bacterium

ncbi_submitter: Rutgers University

ncbi_taxonomy_unfiltered: d__Bacteria;p__Candidatus Krumholzibacteriota;c__Candidatus Krumholzibacteriia;x__unclassified Candidatus Krumholzibacteriia;s__Candidatus Krumholzibacteriia bacterium


ncbi_assembly_name: freshwater MAG --- Ki2-D3_bin-0835

ncbi_isolation_source: lake water

ncbi_organism_name: uncultured Opitutia bacterium

ncbi_submitter: BILS

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__PVC group;p__Verrucomicrobiota;c__Opitutia;x__environmental samples;s__uncultured Opitutia bacterium


ncbi_organism_name: uncultured Opitutaceae bacterium

ncbi_submitter: EMG


ncbi_country: India

ncbi_isolation_source: soil

ncbi_organism_name: Streptomyces sp. Ru73

ncbi_submitter: Institute of Genomics and Integrative Biology


ncbi_country: Canada: Cariboo Plateau

ncbi_isolation_source: alkaline salt lake

ncbi_organism_name: Planctomycetaceae bacterium

ncbi_submitter: University of Calgary


ncbi_country: Japan: Niigata

ncbi_isolation_source: river sediment

ncbi_organism_name: Oryzomonas rubra

ncbi_refseq_category: reference genome

ncbi_submitter: The University of Tokyo

ncbi_type_material_designation: assembly from type material


ncbi_isolation_source: mouse gut metagenome

ncbi_organism_name: uncultured Muribaculum sp.

ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_organism_name: Chitinophagaceae bacterium

ncbi_submitter: Stockholm University


ncbi_country: China: Xizang

ncbi_isolation_source: fresh feces

ncbi_organism_name: Oscillospiraceae bacterium

ncbi_submitter: Tibet Agricultural and Animal Husbandry College


ncbi_organism_name: Oxalobacteraceae bacterium AB_14

ncbi_submitter: DOE Joint Genome Institute


ncbi_organism_name: Acetobacter fabarum

ncbi_submitter: Cornell University


ncbi_isolation_source: sheep gut metagenome

ncbi_organism_name: uncultured Prevotellaceae bacterium


ncbi_organism_name: Gemmatimonadales bacterium

ncbi_submitter: Zhejiang University


ncbi_organism_name: Stellaceae bacterium


ncbi_assembly_name: Campylobacter jejuni CVM N9095 v1.0

ncbi_country: USA: CO

ncbi_isolation_source: Chicken Breast

ncbi_organism_name: Campylobacter jejuni

ncbi_strain_identifiers: CVM N9095

ncbi_submitter: FDA


ncbi_isolate: metabat2_XCR1_HOM_7857_bwa.137 MAG

ncbi_strain_identifiers: metabat2_XCR1_HOM_7857_bwa.137 MAG

ncbi_submitter: the roslin institute (university of edinburgh)

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;x__Cyanobacteriota/Melainabacteria group;p__Candidatus Melainabacteria;o__Candidatus Gastranaerophilales;x__unclassified Candidatus Gastranaerophilales;s__Candidatus Gastranaerophilales bacterium


ncbi_country: Iran: Caspian Sea near Babolsar

ncbi_isolation_source: Caspian sea 150 m depth

ncbi_organism_name: Pseudomonadota bacterium

ncbi_submitter: University of Tehran


ncbi_isolation_source: nasopharynx

ncbi_organism_name: Streptococcus pneumoniae

ncbi_submitter: SC


ncbi_country: USA: NY

ncbi_organism_name: Bordetella parapertussis

ncbi_submitter: Centers for Disease Control and Prevention


ncbi_organism_name: uncultured Muribaculaceae bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_country: China: Beijing

ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: Beijing Institute of Genomics


ncbi_organism_name: Bradyrhizobium diazoefficiens

ncbi_strain_identifiers: USDA 142


ncbi_organism_name: uncultured Acidobacteriota bacterium

ncbi_submitter: Center for Microbial Communities

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Acidobacteriota;x__environmental samples;s__uncultured Acidobacteriota bacterium


ncbi_country: Ghana

ncbi_organism_name: Salmonella enterica

ncbi_submitter: University of Copenhagen


ncbi_country: Canada: Lacombe

ncbi_isolation_source: feces

ncbi_organism_name: Clostridiales bacterium

ncbi_submitter: AAFC


ncbi_country: USA

ncbi_organism_name: Escherichia coli TW10119

ncbi_submitter: Institute for Genome Sciences


ncbi_isolation_source: ruminant gastrointestinal tract

ncbi_organism_name: Lachnospiraceae bacterium

ncbi_submitter: Nanjing Agricultural University


ncbi_country: China: Nanjing

ncbi_isolate: new MAG-135

ncbi_isolation_source: bioreactor sludge

ncbi_organism_name: Rhizobiaceae bacterium

ncbi_strain_identifiers: new MAG-135

ncbi_submitter: Micoorganism


ncbi_organism_name: uncultured Atopobiaceae bacterium

ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_organism_name: Motiliproteus sp.

ncbi_submitter: Second Institute Of Oceanography,MNR


ncbi_country: France

ncbi_isolation_source: dairy product

ncbi_organism_name: Escherichia coli

ncbi_submitter: Anses


ncbi_isolation_source: Sludge ENVO:00002044

ncbi_organism_name: Chelatococcus asaccharovorans

ncbi_submitter: Helmholtz Centre for Environmental Research


ncbi_organism_name: Paracoccus sp. (in: a-proteobacteria)

ncbi_submitter: The University of Texas at Austin

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhodobacterales;f__Paracoccaceae;g__Paracoccus;x__unclassified Paracoccus (in: a-proteobacteria);s__Paracoccus sp. (in: a-proteobacteria)


ncbi_organism_name: Acutalibacteraceae bacterium

ncbi_submitter: Institute of Clinical Molecular Biology, University of Kiel, Germany


ncbi_organism_name: Spirochaetales bacterium

ncbi_submitter: Helmholtz Centre for Environmental Research - UFZ


ncbi_country: United Kingdom

ncbi_isolation_source: environment

ncbi_submitter: SC


ncbi_country: Thailand

ncbi_isolation_source: stool

ncbi_organism_name: Escherichia coli K-12

ncbi_submitter: JCVI


ncbi_country: Italy: PonteRosarolo

ncbi_isolation_source: Superficial water

ncbi_submitter: IZSAM

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Typhimurium


ncbi_isolation_source: anaerobic digestion of organic wastes under variable temperature conditions and feedstocks

ncbi_organism_name: Syntrophomonadaceae bacterium

ncbi_submitter: Technical University of Denmark


ncbi_organism_name: uncultured delta proteobacterium

ncbi_submitter: Center for Microbial Communities

ncbi_taxonomy_unfiltered: d__Bacteria;x__delta/epsilon subdivisions;c__Deltaproteobacteria;x__environmental samples;s__uncultured delta proteobacterium


ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: University Hospital Muenster


ncbi_submitter: Centre for Microbiome Research


ncbi_organism_name: Enterobacter sp. 01-M-03-SI-ECC_S142

ncbi_submitter: Institut Pasteur de la Guadeloupe


ncbi_organism_name: Streptococcus pyogenes

ncbi_submitter: Fondazione IRCCS Policlinico San Matteo


ncbi_organism_name: Pseudonocardia sp.

ncbi_submitter: University of Waterloo


ncbi_organism_name: uncultured Oscillospiraceae bacterium


ncbi_submitter: National Centre for Infectious Diseases


ncbi_organism_name: uncultured Verrucomicrobiae bacterium

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__PVC group;p__Verrucomicrobiota;c__Verrucomicrobiia;x__environmental samples;s__uncultured Verrucomicrobiae bacterium


ncbi_organism_name: Lachnospiraceae bacterium

ncbi_submitter: Federal Research and Clinical Centre of Physical-Chemical Medicine


ncbi_isolation_source: human gut

ncbi_organism_name: uncultured Eubacteriales bacterium

ncbi_submitter: EBI


ncbi_organism_name: uncultured Chloroflexia bacterium

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Chloroflexota;c__Chloroflexia;x__environmental samples;s__uncultured Chloroflexia bacterium


ncbi_organism_name: Salmonella sp. 741265056_HSA

ncbi_submitter: TEL AVIV MEDICAL CENTER


ncbi_organism_name: Streptococcus suis

ncbi_submitter: Chulalongkorn University


ncbi_organism_name: Lysobacteraceae bacterium

ncbi_submitter: The University of Texas at Austin


ncbi_organism_name: Streptococcus salivarius

ncbi_submitter: Icahn School of Medicine at Mount Sinai


ncbi_organism_name: Enterococcus faecalis

ncbi_submitter: Shenzhen Centre for Disease Control and Prevention


ncbi_organism_name: Mitsuokella jalaludinii

ncbi_submitter: Helmholtz Centre for Infection Research


ncbi_country: China: Wuyi Polymetallic Mine; Guangxi Province

ncbi_isolation_source: acid mine drainage sediment

ncbi_organism_name: Planctomycetota bacterium

ncbi_submitter: Sun Yat-sen University, Guangzhou


ncbi_country: Republic of the Congo: Pointe-Noire

ncbi_isolation_source: P3 gut compartment

ncbi_organism_name: Bacteroidales bacterium

ncbi_submitter: Max Planck Institute for Terrestrial Microbiology


ncbi_isolation_source: human gut metagenome

ncbi_organism_name: uncultured Dialister sp.

ncbi_submitter: European Bioinformatics Institute


ncbi_organism_name: Klebsiella pneumoniae


ncbi_organism_name: Pseudomonas viridiflava

ncbi_submitter: MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY


ncbi_isolation_source: mouse gut metagenome

ncbi_organism_name: uncultured Ruminococcus sp.

ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_country: Antarctica

ncbi_isolation_source: soil

ncbi_organism_name: Bacillus sp. PAMC26543

ncbi_submitter: Korea University

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;x__unclassified Bacillus (in: firmicutes);s__Bacillus sp. PAMC26543


ncbi_country: Belize: Mesoamerican Barrier Reef; Blue Ground

ncbi_isolation_source: sponge tissue

ncbi_organism_name: Nitrospirales bacterium

ncbi_submitter: Stony Brook University


ncbi_isolation_source: low methane producing sheep

ncbi_organism_name: Clostridiales bacterium UBA4304

ncbi_submitter: University of Queensland


ncbi_organism_name: Patescibacteria group bacterium

ncbi_submitter: Collaborative Research Centre AquaDiva

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;x__Patescibacteria group;x__unclassified Patescibacteria group;s__Patescibacteria group bacterium


ncbi_organism_name: Niallia sp. FSL K6-0077

ncbi_submitter: Penn State

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Niallia;x__unclassified Niallia;s__Niallia sp. FSL K6-0077


ncbi_organism_name: Dehalococcoidia bacterium

ncbi_submitter: Karlsruhe Institute of Technology


ncbi_country: Canada

ncbi_isolation_source: Imported Shrimp

ncbi_organism_name: Vibrio parahaemolyticus

ncbi_submitter: Health Canada


ncbi_assembly_name: freshwater MAG --- AM-lipid-01-D8_bin-1043

ncbi_isolation_source: lake water

ncbi_submitter: BILS


ncbi_country: Tanzania

ncbi_isolation_source: Not known

ncbi_submitter: SC

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Typhi


ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured Muribaculaceae bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_organism_name: Vibrio atypicus

ncbi_submitter: Institute of Oceanology, Chinese Academy of Sciences


ncbi_organism_name: Prevotella sp.

ncbi_submitter: Helmholtz Centre for Infection Research


ncbi_country: Norway

ncbi_isolation_source: raw chicken

ncbi_organism_name: Pseudomonas haemolytica

ncbi_submitter: Nofima


ncbi_country: Japan: Hiroshima

ncbi_isolation_source: Sediment

ncbi_organism_name: Marinobacterium iners

ncbi_submitter: The University of Tokyo


ncbi_isolation_source: cold seep

ncbi_organism_name: Candidatus Aminicenantes bacterium

ncbi_submitter: Third Institute of Oceanography, Ministry of Natural Resources

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;p__Candidatus Aminicenantota;x__unclassified Candidatus Aminicenantes;s__Candidatus Aminicenantes bacterium


ncbi_country: Poland

ncbi_organism_name: Hafnia paralvei

ncbi_submitter: nankai university


ncbi_organism_name: Gemmatimonadaceae bacterium

ncbi_submitter: Zhejiang University


ncbi_organism_name: Mesoplasma entomophilum

ncbi_strain_identifiers: TAC

ncbi_submitter: Ginkgo Bioworks Inc.


ncbi_country: China: Beijing

ncbi_isolation_source: rice leaves

ncbi_organism_name: Xanthomonas oryzae pv. oryzae

ncbi_submitter: Huazhong Agricultural University


ncbi_isolation_source: feces

ncbi_organism_name: Campylobacter jejuni


ncbi_organism_name: Flavobacterium sp. DT2-2

ncbi_submitter: Institute of Tibetan Plateau Research


ncbi_organism_name: Streptomyces virens

ncbi_submitter: WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)


ncbi_isolation_source: human feces metagenome

ncbi_organism_name: uncultured Coriobacteriaceae bacterium

ncbi_submitter: EMG


ncbi_organism_name: Escherichia coli

ncbi_submitter: University of Oxford


ncbi_country: China: Hong Kong Special Administrative Region

ncbi_isolation_source: activated sludge from Hong Kong Shatin wastewater treatment plant

ncbi_organism_name: Candidatus Nomurabacteria bacterium

ncbi_submitter: The University of Hong Kong

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;x__Patescibacteria group;x__Parcubacteria group;p__Candidatus Nomuraibacteriota;x__unclassified Candidatus Nomurabacteria;s__Candidatus Nomurabacteria bacterium


ncbi_submitter: HELMHOLTZ CENTRE FOR INFECTION RESEARCH


ncbi_organism_name: uncultured Oscillospiraceae bacterium


ncbi_organism_name: uncultured Lachnospiraceae bacterium


ncbi_organism_name: Christensenellaceae bacterium


ncbi_submitter: University of Maryland, School of Medicine


ncbi_country: China:Hong Kong SAR; Shatin waste water treatment plant

ncbi_isolation_source: activated sludge from Shatin waste water treatment plant collected monthly from 2007 through 2015

ncbi_organism_name: Hyphomicrobiaceae bacterium

ncbi_submitter: The University Hong Kong


ncbi_organism_name: Duncaniella freteri


ncbi_organism_name: Planomicrobium okeanokoites

ncbi_submitter: marine college, shandong university


ncbi_organism_name: Campylobacter volucris LMG 24379

ncbi_submitter: USDA, ARS, WRRC


ncbi_organism_name: Helicobacter cinaedi


ncbi_country: Ukraine: Chokrak sulfur springs

ncbi_isolation_source: microbial mat from saline sulfide-rich spring

ncbi_organism_name: Candidatus Viridilinea halotolerans

ncbi_submitter: Research Center of Biotechnology RAS


ncbi_organism_name: Akkermansia muciniphila


ncbi_country: USA: Rifle; CO

ncbi_isolation_source: Rifle well FP-101 under high O2 conditions; 1.2 micron filter; full assembly

ncbi_submitter: Banfield Lab, University of California, Berkeley

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;x__Patescibacteria group;x__Microgenomates group;p__Candidatus Levyibacteriota;x__unclassified Candidatus Levyibacteriota;s__Candidatus Levybacteria bacterium RIFCSPHIGHO2_12_FULL_38_12


ncbi_country: USA

ncbi_organism_name: Bacteroides thetaiotaomicron

ncbi_submitter: Icahn School of Medicine


ncbi_isolation_source: Hospital Universitario Son de Espases (Palma de Mallorca)

ncbi_organism_name: Klebsiella oxytoca

ncbi_submitter: CNAG-CRG


ncbi_country: China

ncbi_isolation_source: tissue

ncbi_organism_name: Citrobacter braakii

ncbi_submitter: Qingdao Municipal Hospital


ncbi_country: Switzerland: Zurich

ncbi_isolation_source: homogenate

ncbi_organism_name: Francisella tularensis subsp. holarctica

ncbi_submitter: Spiez Laboratory


ncbi_organism_name: Methylotenera sp.

ncbi_submitter: EPFL


ncbi_organism_name: Eubacterium sp. CAG:38

ncbi_submitter: Institute of Clinical Molecular Biology, University of Kiel, Germany

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Clostridia;o__Eubacteriales;f__Eubacteriaceae;g__Eubacterium;x__unclassified Eubacterium (in: firmicutes);s__Eubacterium sp. CAG:38


ncbi_country: Brazil: Sao Paulo

ncbi_organism_name: Clostridioides difficile

ncbi_submitter: University of Sao Paulo


ncbi_country: Denmark

ncbi_isolation_source: blood

ncbi_organism_name: Escherichia coli HVH 1 (4-6876161)

ncbi_submitter: Broad Institute

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;x__Escherichia coli HVH 1 (4-6876161)


ncbi_country: Canada: Ontario

ncbi_isolation_source: Environment - Litter/Manure

ncbi_submitter: LFZ

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Enteritidis;x__Salmonella enterica subsp. enterica serovar Enteritidis str. SA20082034


ncbi_country: China: Zhejiang

ncbi_organism_name: Elizabethkingia meningoseptica

ncbi_submitter: The First Affiliated Hospital of Medical College, Zhejiang University


ncbi_country: Thailand: Lamphun

ncbi_isolation_source: Rectal swab

ncbi_organism_name: Escherichia coli

ncbi_submitter: JCVI


ncbi_organism_name: Megasphaera micronuciformis

ncbi_submitter: EMG


ncbi_country: Russia

ncbi_isolation_source: aborted fetus

ncbi_organism_name: Brucella abortus

ncbi_submitter: Rosselkhoznadzor The Russian State Center for Animal Feed and Drug Standardization and Quality


ncbi_country: Ireland

ncbi_submitter: University of Galway


ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured Alistipes sp.

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_organism_name: Paenibacillus sp.

ncbi_submitter: The University of Texas at Austin


ncbi_country: China: Xinjiang Guertu

ncbi_isolation_source: Citellus undulatus

ncbi_organism_name: Yersinia pestis

ncbi_submitter: Beijing Institute of Microbiology and Epidemiology


ncbi_organism_name: Vicinamibacterales bacterium

ncbi_submitter: Zhejiang University


ncbi_organism_name: uncultured Lachnospiraceae bacterium


ncbi_country: Spain

ncbi_isolation_source: Nasal swab

ncbi_organism_name: Mycoplasmopsis bovis

ncbi_submitter: Universidad de Murcia


ncbi_country: Finland

ncbi_organism_name: Campylobacter jejuni

ncbi_submitter: University of Helsinki


ncbi_organism_name: uncultured Balneolaceae bacterium

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;x__Bacteroidota/Chlorobiota group;p__Balneolota;c__Balneolia;o__Balneolales;f__Balneolaceae;x__environmental samples;s__uncultured Balneolaceae bacterium


ncbi_isolation_source: Distal colon

ncbi_organism_name: uncultured Dorea sp.


ncbi_organism_name: Streptococcus pyogenes serotype M18

ncbi_submitter: IZLSLER


ncbi_organism_name: Halobacillus karajensis

ncbi_submitter: URMITE


ncbi_country: Japan

ncbi_isolation_source: River

ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: International Pseudomonas aeruginosa Consortium


ncbi_submitter: Sichuan University


ncbi_organism_name: Roseitalea porphyridii

ncbi_submitter: Leibniz-Institut DSMZ - German Collection of Microorganisms and Cell Cultures GmbH


ncbi_isolation_source: ruminant gastrointestinal tract

ncbi_organism_name: Ruminiclostridium sp.

ncbi_submitter: Nanjing Agricultural University


ncbi_organism_name: uncultured Eubacteriales bacterium


ncbi_organism_name: Staphylococcus pseudintermedius

ncbi_submitter: Laboratory of Veterinary Bacteriology UFRGS


ncbi_isolation_source: metagenome

ncbi_organism_name: uncultured bacterium

ncbi_submitter: European Bioinformatics Institute


ncbi_organism_name: Aerosakkonema sp. BLCC-F183

ncbi_submitter: University of Florida


ncbi_organism_name: Acinetobacter baumannii

ncbi_submitter: Laval University


ncbi_organism_name: uncultured Gemmatimonadaceae bacterium

ncbi_submitter: Centre for Microbiome Research


ncbi_organism_name: uncultured Flavobacteriaceae bacterium


ncbi_submitter: West African Centre for Cell Biology of Infectious Pathogens

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Infantis


ncbi_organism_name: Candidatus Fimivicinus sp.

ncbi_submitter: Federal Research and Clinical Centre of Physical-Chemical Medicine

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Clostridia;o__Eubacteriales;f__Oscillospiraceae;x__Oscillospiraceae incertae sedis;g__Candidatus Fimivicinus;x__unclassified Candidatus Fimivicinus;s__Candidatus Fimivicinus sp.


ncbi_organism_name: Streptomyces sp. DT197

ncbi_submitter: University of Liege


ncbi_organism_name: Oerskovia paurometabola

ncbi_submitter: Institution of Microbiology, Chinese Academy of Science(WDCM)


ncbi_organism_name: Alistipes onderdonkii


ncbi_organism_name: Miltoncostaeaceae bacterium

ncbi_submitter: Center for Microbial Communities


ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;p__Candidatus Saccharimonadota;x__environmental samples;s__uncultured Candidatus Saccharibacteria bacterium


ncbi_organism_name: Salmonella sp. NW780


ncbi_organism_name: Candidatus Nanopelagicales bacterium

ncbi_submitter: University of Southern California

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Actinomycetota;c__Actinomycetes;o__Candidatus Nanopelagicales;x__unclassified Candidatus Nanopelagicales;s__Candidatus Nanopelagicales bacterium


ncbi_organism_name: uncultured Bacteroidaceae bacterium


ncbi_submitter: Anqing First People's Hospital of Anhui Medical University


ncbi_organism_name: Coxiella-like endosymbiont

ncbi_submitter: Beijing Institute of Microbiology and Epidemiology


ncbi_organism_name: Enterococcus faecalis

ncbi_submitter: The University of Adelaide


ncbi_organism_name: Clostridia bacterium


ncbi_isolation_source: human gut

ncbi_submitter: EBI


ncbi_organism_name: Terriglobia bacterium

ncbi_submitter: Watershed Function Science Focus Area


ncbi_country: Atlantic Ocean: Mid Cayman Rise

ncbi_isolation_source: Dilute Hydrothermal Plume

ncbi_organism_name: Dehalococcoidia bacterium

ncbi_submitter: The University of Hong Kong


ncbi_country: Canada: Lacombe

ncbi_isolation_source: feces

ncbi_organism_name: Spirochaetia bacterium

ncbi_submitter: AAFC


ncbi_organism_name: Candidatus Acidiferrales bacterium

ncbi_submitter: The Microflora Danica Consortium

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Acidobacteriota;c__Terriglobia;o__Candidatus Acidiferrales;x__unclassified Candidatus Acidiferrales;s__Candidatus Acidiferrales bacterium


ncbi_submitter: WELLCOME SANGER INSTITUTE


ncbi_organism_name: uncultured Oscillospiraceae bacterium


ncbi_country: USA:Madison; Wisconsin

ncbi_isolation_source: activated sludge from EBPR Bioreactor

ncbi_organism_name: Pseudomonadota bacterium

ncbi_submitter: University of Wisconsin-Madison


ncbi_isolation_source: anaerobic digestion of organic wastes under variable temperature conditions and feedstocks

ncbi_organism_name: Clostridiales bacterium

ncbi_submitter: Technical University of Denmark


ncbi_organism_name: Sphingomicrobium sp.

ncbi_submitter: Universidad Andres Bello, Castro Lab


ncbi_isolation_source: marine metagenome

ncbi_organism_name: uncultured Rhodobiaceae bacterium

ncbi_submitter: EMG


ncbi_country: Portugal: Oporto

ncbi_isolation_source: Raw-frozen dog food

ncbi_submitter: Faculdade de Farmacia, Universidad do Porto


ncbi_assembly_name: IMG-taxon 2671180223 annotated assembly

ncbi_organism_name: Shouchella lonarensis

ncbi_submitter: DOE - JOINT GENOME INSTITUTE


ncbi_organism_name: Paenibacillus sp. PastH-4

ncbi_submitter: DOE Joint Genome Institute


ncbi_country: United Kingdom:Scotland

ncbi_isolation_source: blood

ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: SC


ncbi_isolation_source: human feces metagenome


ncbi_country: China

ncbi_isolation_source: chicken carcass

ncbi_submitter: China National Center for Food Safety Risk Assessment

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Indiana


ncbi_country: New Zealand: Hamilton

ncbi_isolation_source: Bovine rumen

ncbi_organism_name: Clostridiales bacterium FE2010

ncbi_submitter: AgResearch Ltd


ncbi_country: Saudi Arabia: KAUST

ncbi_isolation_source: marine ANAMMOX bioreactor

ncbi_submitter: KAUST


ncbi_assembly_name: freshwater MAG --- VK3_bin-0716

ncbi_isolation_source: lake water

ncbi_submitter: BILS

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__PVC group;p__Verrucomicrobiota;c__Verrucomicrobiia;o__Limisphaerales;x__environmental samples;s__uncultured Verrucomicrobia subdivision 3 bacterium


ncbi_isolation_source: Dental biofilm

ncbi_organism_name: Porphyromonas gingivalis

ncbi_submitter: Health Sciences University of Hokkaido


ncbi_country: Bangladesh

ncbi_isolation_source: stool

ncbi_organism_name: Shigella boydii

ncbi_submitter: University of Maryland, School of Medicine


ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured Acetatifactor sp.

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_organism_name: Acidobacteriota bacterium

ncbi_submitter: EPFL


ncbi_isolation_source: sheep gut metagenome

ncbi_organism_name: uncultured Bacteroidales bacterium

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;x__FCB group;x__Bacteroidota/Chlorobiota group;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;x__environmental samples;s__uncultured Bacteroidales bacterium


ncbi_isolation_source: human feces

ncbi_organism_name: uncultured Bacilli bacterium

ncbi_submitter: stanford university school of medicine

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Bacilli;x__environmental samples;s__uncultured Bacilli bacterium


ncbi_isolation_source: not known

ncbi_organism_name: Klebsiella pneumoniae


ncbi_country: China: Chengdu; Sichuan

ncbi_isolation_source: environmental surface

ncbi_submitter: West China Hospital, Sichuan University


ncbi_submitter: Center for Microbial Communities


ncbi_isolation_source: feces

ncbi_organism_name: uncultured Duncaniella sp.


ncbi_organism_name: uncultured Eubacteriales bacterium


ncbi_organism_name: Clostridium tanneri

ncbi_submitter: University of Oklahoma


ncbi_country: USA

ncbi_isolation_source: retroauricular crease

ncbi_organism_name: Staphylococcus epidermidis NIHLM040

ncbi_submitter: NISC - NIH Intramural Sequencing Center


ncbi_country: China: Xizang

ncbi_isolation_source: fresh feces

ncbi_organism_name: Treponema sp.

ncbi_submitter: Tibet Agricultural and Animal Husbandry College


ncbi_organism_name: Proteus mirabilis

ncbi_submitter: Comenius University Science Park


ncbi_assembly_name: Rumen uncultured genome RUG12510

ncbi_isolation_source: cattle rumen

ncbi_organism_name: uncultured Sarcina sp.

ncbi_submitter: THE ROSLIN INSTITUTE


ncbi_organism_name: Baekduia sp.

ncbi_submitter: Zhejiang University


ncbi_organism_name: Escherichia coli

ncbi_submitter: China Agricultural University


ncbi_country: USA: WA

ncbi_isolation_source: environmental swab

ncbi_organism_name: Vibrio vulnificus

ncbi_submitter: FDA


ncbi_organism_name: Muribaculum intestinale


ncbi_organism_name: uncultured Ruminiclostridium sp.


ncbi_organism_name: Agathobacter sp.

ncbi_submitter: AAFC


ncbi_country: South Korea

ncbi_submitter: Seoul National University


ncbi_organism_name: Victivallaceae bacterium


ncbi_isolation_source: human gut metagenome

ncbi_organism_name: uncultured Clostridium sp.

ncbi_submitter: European Bioinformatics Institute


ncbi_country: Brazil

ncbi_isolation_source: urine

ncbi_organism_name: Enterococcus faecium

ncbi_submitter: University of Sao Paulo


ncbi_organism_name: Lacticaseibacillus paracasei

ncbi_submitter: Shandong University (Qingdao Campus)


ncbi_organism_name: Maricaulis sp.

ncbi_submitter: Tang lab


ncbi_organism_name: Streptococcus pyogenes ABC020046589

ncbi_submitter: Broad Institute


ncbi_country: United Kingdom

ncbi_organism_name: Shigella sonnei

ncbi_submitter: SC


ncbi_isolation_source: Clinical

ncbi_organism_name: Legionella pneumophila


ncbi_isolation_source: meat

ncbi_organism_name: Clostridium estertheticum

ncbi_submitter: University of Zurich


ncbi_assembly_name: freshwater MAG --- AM-lipid-02-D1_bin-0085

ncbi_isolation_source: lake water

ncbi_organism_name: uncultured Sphingomonadales bacterium

ncbi_submitter: BILS


ncbi_submitter: Washington University in Saint Louis


ncbi_organism_name: Senegalimassilia anaerobia

ncbi_submitter: Federal Research and Clinical Centre of Physical-Chemical Medicine


ncbi_country: Luxembourg: Schifflange

ncbi_isolation_source: water

ncbi_organism_name: Moraxellaceae bacterium UBA2032

ncbi_submitter: University of Queensland


ncbi_organism_name: Flavobacteriaceae bacterium

ncbi_submitter: Institute of Hydrobiology, Department of Aquatic Microbial Ecology, Biology Centre, CAS


ncbi_country: New Zealand: Wai-iti river; Nelson

ncbi_isolation_source: freshwater Microcoleus biofilm

ncbi_organism_name: Lysobacterales bacterium

ncbi_submitter: University of Auckland


ncbi_organism_name: Muribaculaceae bacterium

ncbi_submitter: Washington University School of Medicine


ncbi_organism_name: Escherichia coli

ncbi_submitter: The Hong Kong Polytechnic University


ncbi_isolation_source: Faeces

ncbi_organism_name: Akkermansia muciniphila

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_assembly_name: Salmonella enterica CVM N42232 v1.0

ncbi_country: USA: NM

ncbi_isolation_source: Ground Turkey

ncbi_submitter: FDA

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;sb__Salmonella enterica subsp. enterica;x__Salmonella enterica subsp. enterica serovar Senftenberg


ncbi_organism_name: Bosea sp. (in: a-proteobacteria)

ncbi_submitter: EPFL

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Alphaproteobacteria;o__Hyphomicrobiales;f__Boseaceae;g__Bosea;x__unclassified Bosea (in: a-proteobacteria);s__Bosea sp. (in: a-proteobacteria)


ncbi_isolation_source: mouse gut metagenome

ncbi_organism_name: uncultured Porphyromonadaceae bacterium

ncbi_submitter: EMG


ncbi_isolation_source: coastal sediment

ncbi_organism_name: uncultured Eudoraea sp.

ncbi_submitter: UNIVERSITY OF VIENNA


ncbi_organism_name: Streptococcus suis

ncbi_submitter: Huazhong Agricultural University


ncbi_organism_name: Burkholderia pseudomallei


ncbi_country: Austria

ncbi_isolation_source: wound

ncbi_organism_name: Corynebacterium diphtheriae bv. gravis

ncbi_submitter: AGES


ncbi_isolation_source: caecum

ncbi_organism_name: Massilimicrobiota timonensis

ncbi_submitter: Veterinary Research Institute


ncbi_country: USA: Granby; CT

ncbi_isolation_source: termite hindgut

ncbi_organism_name: Dysgonomonas sp. GY75

ncbi_submitter: University of Connecticut


ncbi_isolation_source: host stool sample

ncbi_organism_name: Robertmurraya massiliosenegalensis JC6

ncbi_submitter: laboratoire URMITE


ncbi_isolation_source: soil

ncbi_organism_name: Streptomyces tsukubensis

ncbi_submitter: zhejiang university


ncbi_country: China: Weifang

ncbi_isolation_source: chicken dung channel

ncbi_submitter: University College London (UCL)


ncbi_organism_name: Rhodopseudomonas sp.

ncbi_submitter: Joint Microbiome Facility


ncbi_organism_name: uncultured Muribaculaceae bacterium


ncbi_country: Belgium

ncbi_isolation_source: fecal incubation

ncbi_organism_name: Oscillospiraceae bacterium

ncbi_submitter: United States Department of Agriculture - ARS


ncbi_isolation_source: unknown

ncbi_organism_name: uncultured Rhodobacteraceae bacterium

ncbi_submitter: marine college, shandong university


ncbi_organism_name: Bacillus velezensis

ncbi_submitter: USDA-ARS-NCAUR

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;x__Bacillus subtilis group;x__Bacillus amyloliquefaciens group;s__Bacillus velezensis


ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: Los Angeles County Public Health Lab microbial pathogen submission group


ncbi_isolation_source: tertiary hospital; surgery

ncbi_organism_name: Escherichia coli

ncbi_submitter: University of Greifswald, Institute of Pharmacy


ncbi_organism_name: Erwinia aphidicola

ncbi_submitter: Collaborative Crop Resilience Program


ncbi_isolation_source: sputum

ncbi_organism_name: Burkholderia multivorans

ncbi_submitter: University of Michigan


ncbi_country: Peru: Lima

ncbi_isolation_source: patient

ncbi_organism_name: Mycobacterium tuberculosis

ncbi_submitter: CETR, HSPH, Megan Murray, director


ncbi_country: China: Shenzhen

ncbi_isolation_source: feces

ncbi_organism_name: Coprobacillus sp. AF24-1LB

ncbi_submitter: BGI


ncbi_isolation_source: fasting seabass

ncbi_organism_name: Akkermansiaceae bacterium UBA7331

ncbi_submitter: University of Queensland


ncbi_organism_name: uncultured Roseburia sp.

ncbi_submitter: EMG


ncbi_country: China: Shanghai

ncbi_isolation_source: urine

ncbi_organism_name: Pseudomonas aeruginosa

ncbi_submitter: Fudan University


ncbi_organism_name: Ilumatobacter coccineus YM16-304

ncbi_submitter: National Institute of Technology and Evaluation


ncbi_organism_name: Rothia dentocariosa


ncbi_organism_name: uncultured Streptobacillus sp.


ncbi_country: USA: North Carolina

ncbi_isolation_source: intra-abdominal

ncbi_submitter: JCVI


ncbi_isolation_source: cold seep

ncbi_organism_name: Candidatus Aminicenantes bacterium

ncbi_submitter: Third Institute of Oceanography, Ministry of Natural Resources

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;p__Candidatus Aminicenantota;x__unclassified Candidatus Aminicenantes;s__Candidatus Aminicenantes bacterium


ncbi_organism_name: Staphylococcus epidermidis

ncbi_submitter: NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE


ncbi_organism_name: Acinetobacter baumannii

ncbi_submitter: MRSN BI Team


ncbi_country: USA: NY

ncbi_organism_name: Bacillus thuringiensis

ncbi_submitter: UNC Chapel Hill


ncbi_organism_name: Caulobacteraceae bacterium

ncbi_submitter: Zhejiang University


ncbi_country: USA: Urbana; Illinois

ncbi_isolation_source: Full-scale anaerobic digester operated by the Champaign-Urbana Sanitary District treating a mixture of municipal and industrial waste activated sludge and municipal sewage

ncbi_organism_name: Candidatus Atribacter allofermentans

ncbi_submitter: University of Illinois


ncbi_country: USA

ncbi_isolation_source: Wound

ncbi_organism_name: Staphylococcus aureus

ncbi_strain_identifiers: MSSA

ncbi_submitter: SC


ncbi_isolation_source: human feces metagenome

ncbi_organism_name: uncultured Collinsella sp.


ncbi_organism_name: Chitinophagaceae bacterium

ncbi_submitter: University of Illinois Urbana-Champaign


ncbi_isolation_source: community garden soil

ncbi_organism_name: Bacillus subtilis

ncbi_submitter: University of Dundee Data Analysis Group


ncbi_isolation_source: human feces

ncbi_organism_name: uncultured bacterium

ncbi_submitter: stanford university school of medicine


ncbi_organism_name: bacterium

ncbi_submitter: Institute of Clinical Molecular Biology, University of Kiel, Germany


ncbi_organism_name: Vibrio alginolyticus

ncbi_submitter: China National Center for Food Safety Risk Assessment


ncbi_organism_name: Alteromonas portus

ncbi_submitter: Nanyang Technological University


ncbi_organism_name: Bacillus velezensis

ncbi_submitter: Huizhou University


ncbi_submitter: University of Southern California


ncbi_organism_name: Sinorhizobium meliloti

ncbi_submitter: University of Illinois at Urbana Champaign


ncbi_organism_name: Mannheimia haemolytica

ncbi_submitter: Ruzzini Lab


ncbi_organism_name: Aliarcobacter sp. ERUVET-7

ncbi_submitter: Bursa Uludag University, Faculty of Veterinary Medicine


ncbi_organism_name: Escherichia coli

ncbi_submitter: The Second Affiliated Hospital of Zhejiang University


ncbi_organism_name: uncultured Hyphomicrobiales bacterium

ncbi_submitter: Centre for Microbiome Research


ncbi_organism_name: Clostridioides difficile

ncbi_submitter: Toho university


ncbi_organism_name: Cupriavidus pampae

ncbi_submitter: Institution of Microbiology, Chinese Academy of Science(WDCM)


ncbi_organism_name: Bacillus mycoides

ncbi_submitter: The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology


ncbi_isolation_source: chicken caecal content

ncbi_organism_name: uncultured Clostridia bacterium

ncbi_submitter: Institut National pour la Recherche Agronomique (FRANCE)

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;c__Clostridia;x__environmental samples;s__uncultured Clostridia bacterium


ncbi_organism_name: Chloroflexota bacterium

ncbi_submitter: Third Institute of Oceanography, Ministry of Natural Resources


ncbi_isolation_source: rabbit gut


ncbi_organism_name: Pseudomonadota bacterium

ncbi_submitter: Israel Oceanographic and Limnological Research


ncbi_country: Malaysia

ncbi_isolation_source: closed biodigester

ncbi_organism_name: Patescibacteria group bacterium UBA1449

ncbi_submitter: University of Queensland

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;x__Patescibacteria group;x__unclassified Patescibacteria group;s__Patescibacteria group bacterium UBA1449


ncbi_organism_name: Anaerolineae bacterium

ncbi_submitter: Karlsruhe Institute of Technology


ncbi_country: USA: MD

ncbi_isolation_source: semi soft cheese

ncbi_organism_name: Listeria monocytogenes

ncbi_submitter: FDA/CFSAN


ncbi_isolation_source: disease case

ncbi_organism_name: Neisseria meningitidis NM3223

ncbi_submitter: IGS


ncbi_country: USA: Pittsburgh; Pennsylvania

ncbi_organism_name: Citrobacter koseri

ncbi_submitter: University of Pittsburgh


ncbi_organism_name: Balneolales bacterium

ncbi_submitter: Centro de Astrobiologia


ncbi_country: India: Gulf of Khambhat

ncbi_isolation_source: Pelagic sediment

ncbi_organism_name: Hydrotalea flava

ncbi_submitter: Maharaja Krishnakumarsinhji Bhavnagar University


ncbi_isolation_source: water

ncbi_submitter: University of Siena

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium;x__Mycobacterium avium complex (MAC);s__Mycobacterium intracellulare;sb__Mycobacterium intracellulare subsp. chimaera


ncbi_organism_name: Megamonas funiformis


ncbi_isolation_source: Proximal colon

ncbi_organism_name: uncultured Oscillospiraceae bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_country: USA: Texas

ncbi_organism_name: Serratia symbiotica

ncbi_submitter: University of Texas at Austin


ncbi_country: USA: New York

ncbi_isolation_source: fecal sample

ncbi_organism_name: Phocaeicola vulgatus

ncbi_submitter: University of Chicago


ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: Shenzhen people's hospital


ncbi_organism_name: Burkholderia pseudomallei

ncbi_submitter: SC


ncbi_country: United Kingdom

ncbi_organism_name: Xanthomonas campestris

ncbi_strain_identifiers: NCPPB 4232

ncbi_submitter: University of Exeter


ncbi_country: Denmark: Odense NE

ncbi_isolation_source: activated sludge from OdNE_18-Q3-R46-58

ncbi_organism_name: Saprospiraceae bacterium

ncbi_submitter: Aalborg University


ncbi_isolation_source: Faeces

ncbi_organism_name: Christensenellaceae bacterium


ncbi_isolation_source: NEUS_B leachate from a leachate well at an active municipal landfill in the North Eastern United States

ncbi_organism_name: Dehalococcoidales bacterium

ncbi_submitter: University of Waterloo


ncbi_isolation_source: not provided; submitted under MIGS 2.1

ncbi_organism_name: Thiomicrospira aerophila AL3

ncbi_submitter: DOE Joint Genome Institute


ncbi_country: India: Mandapam

ncbi_isolation_source: Seaweed

ncbi_organism_name: Rhodopirellula halodulae

ncbi_submitter: The Institute of Microbiology of the Chinese Academy of Sciences


ncbi_isolation_source: human stool

ncbi_organism_name: uncultured Succiniclasticum sp.

ncbi_submitter: DOE JGI


ncbi_organism_name: Dehalococcoidaceae bacterium

ncbi_submitter: Karlsruhe Institute of Technology


ncbi_organism_name: Pseudomonas syringae pv. syringae

ncbi_submitter: Ohio State University

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;x__Pseudomonas syringae group;x__Pseudomonas syringae group genomosp. 1;s__Pseudomonas syringae;x__Pseudomonas syringae pv. syringae


ncbi_organism_name: Acinetobacter baumannii

ncbi_submitter: Zhejiang University


ncbi_organism_name: Guyparkeria sp.

ncbi_submitter: XINJIANG INSTITUTE OF ECOLOGY AND GEOGRAPHY


ncbi_assembly_name: Rumen uncultured genome RUG749

ncbi_organism_name: uncultured Prevotellaceae bacterium

ncbi_submitter: THE ROSLIN INSTITUTE


ncbi_organism_name: Bifidobacterium longum

ncbi_submitter: Icahn School of Medicine at Mount Sinai


ncbi_isolation_source: human gut

ncbi_organism_name: uncultured Desulfovibrio sp.

ncbi_submitter: EMG


ncbi_isolation_source: not available

ncbi_submitter: WTSI


ncbi_organism_name: Enterobacter hormaechei

ncbi_submitter: University hospital Lubeck


ncbi_country: China: Lake Taihu; Jiangsu

ncbi_isolation_source: Bloom Water

ncbi_organism_name: Bacillus cereus

ncbi_submitter: Duke Kunshan University


ncbi_isolation_source: kefir

ncbi_organism_name: Lentilactobacillus kefiri

ncbi_submitter: university of ljubljana, biotechnical faculty


ncbi_country: Vanuatu

ncbi_isolation_source: cutaneous ulcer

ncbi_organism_name: [Haemophilus] ducreyi

ncbi_submitter: Centers for Disease Control and Prevention


ncbi_country: Germany

ncbi_isolation_source: raw milk

ncbi_organism_name: Pseudomonas rhodesiae

ncbi_submitter: Technische Universitaet Muenchen


ncbi_organism_name: Blautia obeum


ncbi_country: Netherlands

ncbi_isolation_source: Blood

ncbi_organism_name: Streptococcus pneumoniae

ncbi_submitter: SC


ncbi_organism_name: Bifidobacterium bifidum

ncbi_submitter: Federal Research and Clinical Centre of Physical-Chemical Medicine


ncbi_isolation_source: blood

ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: The First Affiliated Hospital of Nanchang University


ncbi_country: USA: Kauai

ncbi_organism_name: Xanthomonas phaseoli pv. dieffenbachiae

ncbi_submitter: Wageningen University & Research


ncbi_organism_name: uncultured Muribaculaceae bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_assembly_name: Rumen uncultured genome RUG13736

ncbi_isolation_source: cattle rumen

ncbi_organism_name: uncultured Lachnospiraceae bacterium


ncbi_isolation_source: human gut metagenome

ncbi_organism_name: Eikenella corrodens

ncbi_submitter: European Bioinformatics Institute


ncbi_organism_name: Bacteroides sp.

ncbi_submitter: United States Department of Agriculture - ARS


ncbi_country: China: Beijing

ncbi_isolation_source: vaginal

ncbi_organism_name: Fannyhessea vaginae

ncbi_submitter: Institute Of Microbiology Chinese Academy of Sciences


ncbi_country: USA: Pacific Northwest

ncbi_isolation_source: blood from patient with bacteremia

ncbi_organism_name: Escherichia coli

ncbi_submitter: University of Washington


ncbi_country: USA: Delaware Bay

ncbi_isolation_source: bay water spring sample 30 PSU in less than .8 micron size fraction

ncbi_organism_name: Candidatus Pelagibacter communis

ncbi_submitter: DOE Joint Genome Institute

ncbi_taxonomy: d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Candidatus Pelagibacterales;f__Candidatus Pelagibacteraceae;g__Candidatus Pelagibacter;s__Candidatus Pelagibacter communis

ncbi_taxonomy_unfiltered: d__Bacteria;x__Pseudomonadati;p__Pseudomonadota;c__Alphaproteobacteria;o__Candidatus Pelagibacterales;f__Candidatus Pelagibacteraceae;g__Candidatus Pelagibacter;s__Candidatus Pelagibacter communis


ncbi_country: India: Chandigarh

ncbi_isolation_source: Female Behind the ears

ncbi_organism_name: Staphylococcus epidermidis

ncbi_submitter: CSIR-Institute of Microbial Technology


ncbi_isolation_source: metagenome

ncbi_submitter: THE ROSLIN INSTITUTE


ncbi_organism_name: Campylobacter jejuni

ncbi_submitter: Jeonbuk National University


ncbi_organism_name: Actinomycetota bacterium

ncbi_submitter: Kansas State University


ncbi_country: USA: Ohio; western Lake Erie

ncbi_isolation_source: Phytoplankton seston > 100 micron diameter

ncbi_organism_name: Sediminibacterium sp.

ncbi_submitter: University of Michigan


ncbi_isolation_source: Faeces


ncbi_country: China: Shenzhen

ncbi_isolation_source: fecal material [ENVO:00002003]

ncbi_organism_name: Proteus mirabilis

ncbi_submitter: BGI-Shenzhen


ncbi_country: China

ncbi_submitter: The Hong Kong Polytechnic University


ncbi_isolation_source: human feces

ncbi_organism_name: uncultured Clostridium sp.

ncbi_submitter: stanford university school of medicine


ncbi_country: USA

ncbi_isolation_source: ectocervical mucosa

ncbi_organism_name: Lactobacillus jensenii

ncbi_submitter: Massachusetts General Hospital


ncbi_organism_name: Staphylococcus warneri

ncbi_submitter: Universiteit Gent


ncbi_organism_name: Clostridiales bacterium

ncbi_submitter: Nanjing Agricultural University


ncbi_country: China: Hangzhou

ncbi_organism_name: Salmonella sp. S004_57391

ncbi_submitter: Zhejiang University


ncbi_organism_name: Bacteroides ovatus

ncbi_submitter: University of Copenhagen


ncbi_isolation_source: tree leaf

ncbi_organism_name: Mucilaginibacter sp. Bleaf8

ncbi_submitter: Research Institute of Forest Ecology Environment and Protection


ncbi_organism_name: Lactococcus lactis subsp. lactis

ncbi_submitter: World Institute of Kimchi


ncbi_country: Italy: Bologna

ncbi_isolation_source: Rectal swab

ncbi_organism_name: Klebsiella pneumoniae

ncbi_submitter: Policlinico Sant'Orsola-Malpighi


ncbi_isolation_source: animal

ncbi_submitter: National institute for communicable disease control and prevention


ncbi_isolation_source: Human

ncbi_organism_name: Salmonella enterica

ncbi_submitter: Department of Food and Agricultural Sciences, Alma Mater Studiorum - University of Bologna


ncbi_country: China: Fu River Wetland; Wuhan

ncbi_isolation_source: wood soil

ncbi_organism_name: Flavobacterium sp. YJ01

ncbi_submitter: Wuhan Polytechnic University


ncbi_organism_name: Thalassolituus sp.

ncbi_submitter: Tang lab


ncbi_isolation_source: human stool

ncbi_organism_name: uncultured Collinsella sp.

ncbi_submitter: DOE JGI


ncbi_organism_name: Escherichia coli

ncbi_submitter: South China Agricultural University


ncbi_isolation_source: sheep gut metagenome

ncbi_organism_name: uncultured Clostridia bacterium

ncbi_submitter: EMBL-EBI


ncbi_organism_name: Christensenellaceae bacterium

ncbi_submitter: UNIVERSITY OF CAMBRIDGE


ncbi_organism_name: Clostridium sp.


ncbi_organism_name: Muribaculaceae bacterium

ncbi_submitter: China Agricultural University


ncbi_organism_name: uncultured Lachnospiraceae bacterium


ncbi_organism_name: Salinicoccus roseus

ncbi_submitter: Al-Hussein Bin Talal University


ncbi_isolation_source: human gut

ncbi_submitter: EBI


ncbi_organism_name: Achromobacter insuavis

ncbi_submitter: Yunnan Agricultural University


ncbi_country: Sweden: Stordalen Mire

ncbi_isolation_source: permafrost active layer soil

ncbi_organism_name: Phycisphaerales bacterium

ncbi_submitter: Australian Centre for Ecogenomics, The University of Queensland


ncbi_country: Ghana: Accra

ncbi_isolation_source: Rectal swabs

ncbi_organism_name: Enterococcus faecium

ncbi_submitter: Noguchi Memorial Institute for Medical Research


ncbi_country: Japan

ncbi_isolation_source: feces

ncbi_organism_name: Oscillospiraceae bacterium

ncbi_submitter: Yonsei University


ncbi_organism_name: Staphylococcus aureus

ncbi_submitter: Universidad Autonoma de Nuevo Leon


ncbi_country: Atlantic Ocean

ncbi_genome_category: derived from single cell

ncbi_isolation_source: single cell amplified by WGA-X; seawater

ncbi_organism_name: Prochlorococcus sp. AG-355-A18

ncbi_submitter: Massachusetts Institute of Technology


ncbi_country: China: Shanghai


ncbi_submitter: Toho University


ncbi_country: Australia

ncbi_submitter: The ithree institute


ncbi_isolation_source: Glacier ice

ncbi_organism_name: Flavobacterium laiguense

ncbi_submitter: Institute of Microbiology, Chinese Academy of Sciences


ncbi_organism_name: Stenotrophomonas maltophilia

ncbi_submitter: Centro de Investigacion en Alimentacion y Desarrollo


ncbi_isolation_source: gut content

ncbi_submitter: RWTH Aachen University Hospital


ncbi_organism_name: Bifidobacterium longum

ncbi_submitter: Federal Research and Clinical Centre of Physical-Chemical Medicine


ncbi_isolation_source: Faeces

ncbi_organism_name: uncultured bacterium


ncbi_organism_name: Thalassotalea sp.

ncbi_submitter: Institut de Ciencies del Mar


ncbi_isolation_source: Switch grass fiber attached community in cow rumen; 72 hour post incubation

ncbi_organism_name: Firmicutes bacterium UBA1191

ncbi_submitter: University of Queensland

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacillati;p__Bacillota;x__unclassified Bacillota;s__Firmicutes bacterium UBA1191


ncbi_organism_name: Bifidobacterium bifidum

ncbi_submitter: Qingdao University


ncbi_organism_name: Thomasclavelia ramosa

ncbi_submitter: Laboratory for Microbiome Sciences Center for Integrative Medical Sciences, RIKEN


ncbi_assembly_name: Boreal Moss Metagenome Coassembled MAG Green_AP_12

ncbi_organism_name: uncultured Lichenihabitans sp.

ncbi_submitter: Universite de Sherbrooke


ncbi_organism_name: Priestia megaterium

ncbi_submitter: Universiteit Gent


ncbi_submitter: University of Waterloo


ncbi_isolate: isolate

ncbi_organism_name: Escherichia coli

ncbi_strain_identifiers: isolate

ncbi_submitter: Indian Biological Data Centre


ncbi_isolate: AOP28_C2_surf _bin _14

ncbi_organism_name: Microbacterium sp.

ncbi_strain_identifiers: AOP28_C2_surf _bin _14

ncbi_submitter: Genoscope


ncbi_submitter: Centre for Microbiome Research

ncbi_taxonomy_unfiltered: d__Bacteria;x__Bacteria incertae sedis;x__Bacteria candidate phyla;p__Candidatus Saccharimonadota;x__environmental samples;s__uncultured Candidatus Saccharibacteria bacterium


ncbi_organism_name: Staphylococcus chromogenes

ncbi_submitter: Central University of Technology


ncbi_organism_name: Winogradskyella sp.

ncbi_submitter: University of California, Riverside


ncbi_organism_name: Enterococcus pernyi

ncbi_submitter: Guangxi University


ncbi_country: Iran: Caspian Sea near Babolsar

ncbi_isolation_source: Caspian sea 15m depth

ncbi_organism_name: Actinomycetota bacterium

ncbi_submitter: University of Tehran


ncbi_organism_name: Micromonospora sp. NPDC049359

ncbi_submitter: The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology


ncbi_isolation_source: metagenome

ncbi_organism_name: uncultured Clostridia bacterium

ncbi_submitter: THE ROSLIN INSTITUTE


ncbi_organism_name: Lactococcus lactis

ncbi_submitter: Zhejiang University


ncbi_organism_name: Paracoccus aurantiacus

ncbi_submitter: Institution of Microbiology, Chinese Academy of Science(WDCM)


ncbi_organism_name: Nitrosopumilaceae archaeon

ncbi_submitter: Second Institute Of Oceanography,MNR


ncbi_isolation_source: cold seep

ncbi_organism_name: Candidatus Heimdallarchaeota archaeon

ncbi_submitter: Third Institute of Oceanography, Ministry of Natural Resources

ncbi_taxonomy_unfiltered: d__Archaea;x__Promethearchaeati;p__Candidatus Heimdallarchaeota;x__unclassified Candidatus Heimdallarchaeota;s__Candidatus Heimdallarchaeota archaeon


ncbi_country: Korea

ncbi_organism_name: Halalkalicoccus jeotgali B3

ncbi_submitter: DOE Joint Genome Institute


ncbi_organism_name: Methanomicrobiales archaeon


ncbi_organism_name: Poseidonia sp.

ncbi_submitter: Southern University of Science and Technology

ncbi_taxonomy: d__Archaea;p__Thermoplasmatota;c__Candidatus Poseidoniia;o__Candidatus Poseidoniales;f__Candidatus Poseidoniaceae;g__Candidatus Poseidonia;s__

ncbi_taxonomy_unfiltered: d__Archaea;x__Methanobacteriati;p__Thermoplasmatota;c__Candidatus Poseidoniia;o__Candidatus Poseidoniales;f__Candidatus Poseidoniaceae;g__Candidatus Poseidonia;x__unclassified Candidatus Poseidonia;s__Poseidonia sp.


ncbi_organism_name: Methanobacteriota archaeon

ncbi_submitter: Australian Centre for Ecogenomics, The University of Queensland


ncbi_isolation_source: chicken gut metagenome

ncbi_submitter: EMG


ncbi_country: USA: Crystal Geyser near Green River; Utah

ncbi_isolation_source: groundwater

ncbi_taxonomy_unfiltered: d__Archaea;x__Nanobdellati;p__Candidatus Aenigmatarchaeota;x__unclassified Candidatus Aenigmatarchaeota;s__Candidatus Aenigmarchaeota archaeon CG_4_8_14_3_um_filter_37_24


ncbi_submitter: XINJIANG INSTITUTE OF ECOLOGY AND GEOGRAPHY


ncbi_organism_name: uncultured Methanosarcinales archaeon


ncbi_organism_name: Sulfolobaceae archaeon

ncbi_submitter: Montana State University


ncbi_country: USA: Richmond Mine

ncbi_isolation_source: Richmond Mine C75 location

ncbi_organism_name: Thermoplasmatales archaeon UBA444

ncbi_submitter: University of Queensland


ncbi_country: Indonesia

ncbi_isolation_source: coculture originated from an Indonesian acidic hot spring

ncbi_organism_name: Candidatus Micrarchaeota archaeon

ncbi_submitter: Department of Science and Engineering for Sustainable Development, Faculty of Science and Engineering, Soka University

ncbi_taxonomy_unfiltered: d__Archaea;x__Nanobdellati;p__Candidatus Micrarchaeota;x__unclassified Candidatus Micrarchaeota;s__Candidatus Micrarchaeota archaeon


ncbi_organism_name: Methanobrevibacter smithii

ncbi_submitter: Washington University in Saint Louis


ncbi_organism_name: Candidatus Aenigmatarchaeota archaeon

ncbi_submitter: The University of Texas at Austin

ncbi_taxonomy_unfiltered: d__Archaea;x__Nanobdellati;p__Candidatus Aenigmatarchaeota;x__unclassified Candidatus Aenigmatarchaeota;s__Candidatus Aenigmatarchaeota archaeon


ncbi_country: Russia

ncbi_organism_name: Methanothermobacter defluvii


gtdb_type_species_of_genus: t

ncbi_country: Netherlands: The Dekkerswald Institute; Nijmegen

ncbi_isolation_source: Anaerobic top layer (5 to 10 cm) of sediment (depth; 50 cm) in a eutrophic freshwater pond at the Dekkerswald Institute; Nijmegen; The Netherlands

ncbi_organism_name: Methanomethylovorans hollandica DSM 15978

ncbi_submitter: JGI


ncbi_country: USA: Colorado

ncbi_isolation_source: Produced fluids from hydraulically fractured shales

ncbi_organism_name: Methanosarcinales archaeon

ncbi_submitter: The Ohio State University


ncbi_organism_name: Candidatus Woesearchaeota archaeon

ncbi_submitter: Centre for Microbiome Research

ncbi_taxonomy_unfiltered: d__Archaea;x__Nanobdellati;p__Candidatus Woesearchaeota;x__unclassified Candidatus Woesearchaeota;s__Candidatus Woesearchaeota archaeon


ncbi_country: Atlantic Ocean: Sargasso Sea

ncbi_isolation_source: water

ncbi_organism_name: Euryarchaeota archaeon UBA464

ncbi_taxonomy_unfiltered: d__Archaea;x__Methanobacteriati;p__Thermoplasmatota;c__Candidatus Poseidoniia;o__Candidatus Poseidoniales;x__unclassified Candidatus Poseidoniales;s__Euryarchaeota archaeon UBA464


ncbi_organism_name: uncultured Nitrosopumilales archaeon


ncbi_country: China: Guangdong; Fankou

ncbi_isolation_source: sediment

ncbi_organism_name: Thermoplasmatales archaeon

ncbi_submitter: an eLibrary of Microbial Systematics and Genomics


ncbi_country: China: Guangxi; Longshenao


ncbi_organism_name: Nitrososphaeraceae archaeon

ncbi_submitter: Zhejiang University


ncbi_organism_name: uncultured Thermoplasmata archaeon


ncbi_country: China: Dabaoshan Pyrite-Copper Mine; Guangdong Province

ncbi_isolation_source: acid mine drainage sediment

ncbi_organism_name: Thermoplasmata archaeon

ncbi_submitter: Sun Yat-sen University, Guangzhou


ncbi_country: USA: Angelo Coast Range Reserve; CA

ncbi_isolation_source: temperate grassland biome

ncbi_organism_name: Candidatus Bathyarchaeota archaeon

ncbi_submitter: Jill Banfield's Lab at Berkeley

ncbi_taxonomy_unfiltered: d__Archaea;x__Thermoproteati;p__Candidatus Bathyarchaeota;x__unclassified Candidatus Bathyarchaeota;s__Candidatus Bathyarchaeota archaeon


ncbi_country: India: Gulf of Khambhat

ncbi_isolation_source: Pelagic sediment

ncbi_submitter: Maharaja Krishnakumarsinhji Bhavnagar University


ncbi_country: Israel: Negev Desert

ncbi_isolate: NEG bin22

ncbi_isolation_source: soil

ncbi_organism_name: Thermoproteota archaeon

ncbi_strain_identifiers: NEG bin22

ncbi_submitter: Monash University


ncbi_organism_name: Caldivirga sp.


ncbi_country: Bulgaria: Black Sea

ncbi_isolation_source: Brackish water; Black Sea St. 307

ncbi_organism_name: Candidatus Pacearchaeota archaeon

ncbi_submitter: Evolutionary Genomics Group

ncbi_taxonomy_unfiltered: d__Archaea;x__Nanobdellati;x__Candidatus Pacearchaeota;x__unclassified Candidatus Pacearchaeota;s__Candidatus Pacearchaeota archaeon


ncbi_organism_name: Candidatus Micrarchaeota archaeon


ncbi_taxonomy_unfiltered: d__Archaea;x__Thermoproteati;p__Candidatus Bathyarchaeota;c__Candidatus Bathyarchaeia;x__environmental samples;s__uncultured Candidatus Bathyarchaeia archaeon


ncbi_country: China: Anhui; Tongling


ncbi_isolation_source: Seawater

ncbi_organism_name: uncultured Nitrososphaerales archaeon

ncbi_submitter: marine college, shandong university


ncbi_country: China: Guangxi; Wuyi


ncbi_country: USA: California; Modesto

ncbi_organism_name: Candidatus Aenigmatarchaeota archaeon

ncbi_submitter: Innovative Genomics Institute


ncbi_country: Pacific Ocean

ncbi_isolation_source: deep-sea hydrothermal deposit

ncbi_submitter: Portland State University


ncbi_country: USA: Ohio

ncbi_isolation_source: hydraulically fractured well fluid

ncbi_organism_name: Methanohalophilus sp. WG1-DM


ncbi_country: China: Anhui; Maanshan


ncbi_organism_name: Candidatus Micrarchaeia archaeon

ncbi_submitter: Research Center of Biotechnology RAS

ncbi_taxonomy_unfiltered: d__Archaea;x__Nanobdellati;p__Candidatus Micrarchaeota;c__Candidatus Micrarchaeia;x__unclassified Candidatus Micrarchaeia;s__Candidatus Micrarchaeia archaeon


ncbi_organism_name: Acidilobaceae archaeon


ncbi_country: Indonesia: Jambi

ncbi_isolation_source: peat soil

ncbi_submitter: National University of Singapore


ncbi_organism_name: Candidatus Woesearchaeota archaeon


ncbi_country: USA: East Boothbay ME

ncbi_isolation_source: single cell amplified by WGA-X; Bigelow Laboratory Dock

ncbi_organism_name: Methanobacteriota archaeon

ncbi_submitter: Bigelow Laboratory for Ocean Sciences


ncbi_organism_name: Methanobrevibacter sp.

ncbi_submitter: Embrapa Pecuaria Sudeste


ncbi_country: China: Fankou Lead-Zinc Mine; Guangdong Province


ncbi_organism_name: Nitrosopumilus sp.

ncbi_submitter: Tang lab


ncbi_organism_name: archaeon


ncbi_country: Pacific Ocean: Lau Basin

ncbi_isolation_source: marine hydrothermal vent

ncbi_organism_name: Nanobdellati archaeon


ncbi_organism_name: uncultured archaeon


ncbi_submitter: Helmholtz Centre for Environmental Research - UFZ


ncbi_organism_name: Candidatus Bathyarchaeia archaeon

ncbi_submitter: The University of Texas at Austin

ncbi_taxonomy_unfiltered: d__Archaea;x__Thermoproteati;p__Candidatus Bathyarchaeota;c__Candidatus Bathyarchaeia;x__unclassified Candidatus Bathyarchaeia;s__Candidatus Bathyarchaeia archaeon


ncbi_submitter: Collaborative Research Centre AquaDiva


ncbi_assembly_name: IMG-taxon 2654588107 annotated assembly

ncbi_organism_name: Halorientalis persicus

ncbi_submitter: DOE - JOINT GENOME INSTITUTE


ncbi_country: New Zealand: Canterbury region

ncbi_isolation_source: groundwater

ncbi_submitter: The University of Auckland


ncbi_country: Canada: Suncor tailings pond 6

ncbi_isolation_source: waste water

ncbi_organism_name: Methanoregula sp. UBA143

ncbi_submitter: University of Queensland


ncbi_country: China: Guangdong; Yunfu

ncbi_organism_name: Thermoplasmata archaeon

ncbi_submitter: an eLibrary of Microbial Systematics and Genomics


ncbi_country: Russia: Lake Svetloe; Arkhangelsk region

ncbi_isolation_source: sediment from freshwater meromictic lake

ncbi_organism_name: Candidatus Micrarchaeota archaeon

ncbi_submitter: Research Center of Biotechnology


ncbi_country: USA: Rifle; CO

ncbi_isolation_source: Rifle well FP-101 under low O2 conditions; 0.1 micron filter

ncbi_submitter: Banfield Lab, University of California, Berkeley


ncbi_organism_name: Candidatus Nanohaloarchaea archaeon

ncbi_submitter: Diversite, Ecologie et Evolution Microbienne, Unite Ecologie Systematique et Evolution

ncbi_taxonomy_unfiltered: d__Archaea;x__Methanobacteriati;p__Methanobacteriota;x__Stenosarchaea group;c__Candidatus Nanohaloarchaea;x__unclassified Candidatus Nanohaloarchaea;s__Candidatus Nanohaloarchaea archaeon


ncbi_organism_name: Methanobacterium formicicum JCM 10132

ncbi_submitter: The University of Tokyo


ncbi_country: China: Qianquan Hot Springs

ncbi_isolation_source: hot spring sediment

ncbi_organism_name: Candidatus Nitrosocaldus tengchongensis

ncbi_submitter: Sun Yat-Sen University

ncbi_taxonomy: d__Archaea;p__Nitrososphaerota;c__Nitrososphaeria;o__Candidatus Nitrosocaldales;f__Candidatus Nitrosocaldaceae;g__Candidatus Nitrosocaldus;s__Candidatus Nitrosocaldus tengchongensis

ncbi_taxonomy_unfiltered: d__Archaea;x__Thermoproteati;p__Nitrososphaerota;c__Nitrososphaeria;o__Candidatus Nitrosocaldales;f__Candidatus Nitrosocaldaceae;g__Candidatus Nitrosocaldus;s__Candidatus Nitrosocaldus tengchongensis


ncbi_submitter: Universiti Teknologi Malaysia


ncbi_organism_name: uncultured euryarchaeote

ncbi_submitter: EMG


ncbi_submitter: Watershed Function Science Focus Area


ncbi_country: French Guiana: Petit-Saut

ncbi_isolation_source: P4 gut compartment

ncbi_organism_name: Methanomassiliicoccaceae archaeon

ncbi_submitter: Max Planck Institute for Terrestrial Microbiology


ncbi_country: USA: Yellowstone National Park

ncbi_isolation_source: NG05 hot spring; Norris Geyser Basin

ncbi_organism_name: Sulfolobus acidocaldarius

ncbi_submitter: University of Illinois at Urbana-Champaign


ncbi_country: Pacific Ocean: North Pacific Gyre; Station ALOHA

ncbi_isolation_source: ocean water sample from Hawaii Ocean Time-series (HOT) cruises

ncbi_organism_name: Candidatus Poseidoniaceae archaeon

ncbi_submitter: SCOPE

ncbi_taxonomy_unfiltered: d__Archaea;x__Methanobacteriati;p__Thermoplasmatota;c__Candidatus Poseidoniia;o__Candidatus Poseidoniales;f__Candidatus Poseidoniaceae;x__unclassified Candidatus Poseidoniaceae;s__Candidatus Poseidoniaceae archaeon


ncbi_organism_name: uncultured Halobacteriales archaeon

ncbi_submitter: Centre for Microbiome Research


ncbi_organism_name: Natronococcus amylolyticus DSM 10524

ncbi_submitter: University of California, Davis


ncbi_organism_name: Candidatus Caldarchaeum sp.

ncbi_submitter: The University of Texas at Austin

ncbi_taxonomy_unfiltered: d__Archaea;x__Thermoproteati;p__Nitrososphaerota;x__Nitrososphaerota incertae sedis;o__Candidatus Caldarchaeales;f__Candidatus Caldarchaeaceae;g__Candidatus Caldarchaeum;x__unclassified Candidatus Caldarchaeum;s__Candidatus Caldarchaeum sp.


ncbi_submitter: Zhejiang University


ncbi_organism_name: Nitrososphaerota archaeon


ncbi_organism_name: Candidatus Methanarcanum hacksteinii

ncbi_submitter: Estonian Genome Centre, Institute of Genomics, University of Tartu


ncbi_organism_name: Nitrosopumilus sp.

ncbi_submitter: WELLCOME SANGER INSTITUTE


ncbi_country: Pacific Ocean: South Pacific Ocean

ncbi_isolation_source: marine water sample

ncbi_organism_name: Methanobacteriota archaeon

ncbi_submitter: Tara Oceans Consortium


ncbi_organism_name: Candidatus Anstonellaceae archaeon

ncbi_taxonomy: d__Archaea;p__Candidatus Micrarchaeota;c__Candidatus Micrarchaeia;o__Candidatus Anstonellales;f__Candidatus Anstonellaceae;g__;s__

ncbi_taxonomy_unfiltered: d__Archaea;x__Nanobdellati;p__Candidatus Micrarchaeota;c__Candidatus Micrarchaeia;o__Candidatus Anstonellales;f__Candidatus Anstonellaceae;x__unclassified Candidatus Anstonellaceae;s__Candidatus Anstonellaceae archaeon


ncbi_organism_name: Methanosarcinaceae archaeon

ncbi_submitter: California Institute of Technology


ncbi_submitter: Tsinghua University

ncbi_taxonomy: d__Archaea;p__Candidatus Hydrothermarchaeota;c__Candidatus Hydrothermarchaeia;o__Candidatus Hydrothermarchaeales;f__Candidatus Hydrothermarchaeaceae;g__;s__

ncbi_taxonomy_unfiltered: d__Archaea;x__Methanobacteriati;p__Candidatus Hydrothermarchaeota;c__Candidatus Hydrothermarchaeia;o__Candidatus Hydrothermarchaeales;f__Candidatus Hydrothermarchaeaceae;x__unclassified Candidatus Hydrothermarchaeaceae;s__Candidatus Hydrothermarchaeaceae archaeon


ncbi_organism_name: Thermofilum sp.


ncbi_isolation_source: sediment

ncbi_organism_name: Thermoplasmatales archaeon

ncbi_submitter: an eLibrary of Microbial Systematics and Genomics


ncbi_country: China: Longshenao Polymetallic Mine; Guangxi Province

ncbi_isolation_source: acid mine drainage sediment

ncbi_organism_name: bacterium

ncbi_submitter: Sun Yat-sen University, Guangzhou


ncbi_organism_name: uncultured Thermoplasmata archaeon


ncbi_country: New Zealand: Palmerston North

ncbi_isolation_source: rumen fluid

ncbi_organism_name: methanogenic archaeon ISO4-H5

ncbi_submitter: AgResearch Ltd.


ncbi_country: USA:Columbia River; Washington; USA

ncbi_isolation_source: river sediment

ncbi_organism_name: Nitrososphaeraceae archaeon

ncbi_submitter: Colorado State University


ncbi_country: China: Tengchong; Zimeiquan hot spring

ncbi_isolation_source: hot springs sediment

ncbi_organism_name: Candidatus Wolframiiraptor sinensis

ncbi_submitter: Sun Yat-Sen University

ncbi_taxonomy: d__Archaea;p__Nitrososphaerota;c__;o__;f__Candidatus Wolframiiraptoraceae;g__Candidatus Wolframiiraptor;s__Candidatus Wolframiiraptor sinensis

ncbi_taxonomy_unfiltered: d__Archaea;x__Thermoproteati;p__Nitrososphaerota;x__Nitrososphaerota incertae sedis;f__Candidatus Wolframiiraptoraceae;g__Candidatus Wolframiiraptor;s__Candidatus Wolframiiraptor sinensis


ncbi_country: Japan

ncbi_isolation_source: water

ncbi_organism_name: Methanococcus maripaludis OS7

ncbi_submitter: National Institute of Technology and Evaluation


ncbi_organism_name: Nitrososphaerales archaeon


ncbi_country: Argentina: Copahue; Neuquen

ncbi_isolation_source: hot springs

ncbi_organism_name: Candidatus Acidianus copahuensis

ncbi_submitter: INDEAR


ncbi_country: Russia: Altai region; Kulunda Steppe

ncbi_isolation_source: aerobic sediments from hypersaline soda lake

ncbi_organism_name: Natronolimnohabitans sp. A-GB9

ncbi_submitter: Research Center of Biotechnology RAS


ncbi_submitter: EMG

ncbi_taxonomy_unfiltered: d__Archaea;x__Methanobacteriati;p__Thermoplasmatota;c__Candidatus Poseidoniia;o__Candidatus Poseidoniales;x__environmental samples;s__uncultured Candidatus Poseidoniales archaeon


ncbi_country: China: Futian Nature Reserve of Shenzhen

ncbi_isolation_source: coastal marine sediment

ncbi_organism_name: Candidatus Woesearchaeota archaeon

ncbi_submitter: Shenzhen Univeristy


ncbi_organism_name: Candidatus Poseidoniaceae archaeon

ncbi_submitter: Xiamen University


ncbi_organism_name: Candidatus Aenigmatarchaeota archaeon

ncbi_submitter: The University of Texas at Austin


ncbi_organism_name: uncultured archaeon


ncbi_organism_name: Nitrosopumilus sp. Nsub

ncbi_strain_identifiers: Nsub

ncbi_submitter: Hong Kong University of Science and Technology


ncbi_organism_name: Candidatus Bathyarchaeia archaeon

ncbi_submitter: King Abdullah University of Science and Technology (KAUST)


ncbi_isolation_source: marine water

ncbi_submitter: WOODS HOLE OCEANOGRAPHIC INSTITUTION

ncbi_taxonomy_unfiltered: d__Archaea;x__Thermoproteati;p__Nitrososphaerota;x__Nitrososphaerota incertae sedis;x__Marine Group I;x__environmental samples;s__uncultured marine group I thaumarchaeote


ncbi_country: Pacific Ocean: Hydrate Ridge methane seep; Oregon

ncbi_isolation_source: methane seep sediment

ncbi_organism_name: Candidatus Methanomarinus sp.

ncbi_submitter: California Institute of Technology

ncbi_taxonomy_unfiltered: d__Archaea;x__Methanobacteriati;p__Methanobacteriota;x__Stenosarchaea group;c__Methanomicrobia;o__Methanosarcinales;x__ANME-2 cluster;f__Candidatus Methanocomedenaceae;g__Candidatus Methanomarinus;x__unclassified Candidatus Methanomarinus;s__Candidatus Methanomarinus sp.


ncbi_country: New Zealand: Rotorua

ncbi_isolation_source: terrestrial hot spring

ncbi_organism_name: Candidatus Terraquivivens tikiterensis

ncbi_submitter: Portland State University

ncbi_taxonomy: d__Archaea;p__Nitrososphaerota;c__;o__;f__Candidatus Wolframiiraptoraceae;g__Candidatus Terraquivivens;s__Candidatus Terraquivivens tikiterensis

ncbi_taxonomy_unfiltered: d__Archaea;x__Thermoproteati;p__Nitrososphaerota;x__Nitrososphaerota incertae sedis;f__Candidatus Wolframiiraptoraceae;g__Candidatus Terraquivivens;s__Candidatus Terraquivivens tikiterensis


ncbi_organism_name: Methanobrevibacter smithii

ncbi_submitter: Estonian Genome Centre, Institute of Genomics, University of Tartu


ncbi_organism_name: Candidatus Hadarchaeales archaeon

ncbi_taxonomy: d__Archaea;p__Candidatus Hadarchaeota;c__Candidatus Hadarchaeia;o__Candidatus Hadarchaeales;f__;g__;s__

ncbi_taxonomy_unfiltered: d__Archaea;x__Methanobacteriati;p__Candidatus Hadarchaeota;c__Candidatus Hadarchaeia;o__Candidatus Hadarchaeales;x__unclassified Candidatus Hadarchaeales;s__Candidatus Hadarchaeales archaeon


ncbi_organism_name: Thermoproteota archaeon


ncbi_organism_name: Acidianus sp.

ncbi_submitter: Montana State University


ncbi_country: Indonesia: Jambi

ncbi_isolation_source: peat soil

ncbi_organism_name: Thermoplasmata archaeon

ncbi_submitter: National University of Singapore


ncbi_country: USA: Rifle; CO

ncbi_isolation_source: groundwater

ncbi_organism_name: Candidatus Micrarchaeota archaeon

ncbi_submitter: The University of Queensland

ncbi_taxonomy_unfiltered: d__Archaea;x__Nanobdellati;p__Candidatus Micrarchaeota;x__unclassified Candidatus Micrarchaeota;s__Candidatus Micrarchaeota archaeon


ncbi_country: China: Maanshan Magnetite Mine; Anhui Province

ncbi_submitter: Sun Yat-sen University, Guangzhou


ncbi_country: United Kingdom: Warham salt marsh

ncbi_isolation_source: Warham Salt Marsh creek

ncbi_organism_name: Haladaptatus sp. W1

ncbi_submitter: University of Essex


ncbi_isolate: SCGC AAA799-P11

ncbi_isolation_source: single cell amplified by MDA; Atlantis II deep Red Sea brine-seawater interface

ncbi_strain_identifiers: SCGC AAA799-P11

ncbi_submitter: King Abdullah University of Science and Technology

ncbi_taxonomy_unfiltered: d__Archaea;x__Thermoproteati;p__Nitrososphaerota;x__Nitrososphaerota incertae sedis;x__Marine Group I;s__Marine Group I thaumarchaeote SCGC AAA799-P11


ncbi_isolation_source: cold seep

ncbi_submitter: Third Institute of Oceanography, Ministry of Natural Resources

ncbi_taxonomy_unfiltered: d__Archaea;x__Nanobdellati;p__Candidatus Woesearchaeota;x__unclassified Candidatus Woesearchaeota;s__Candidatus Woesearchaeota archaeon


ncbi_submitter: Centre for Microbiome Research


ncbi_country: Antarctica: East Antarctica; Lake Untersee

ncbi_isolation_source: benthic mat of the anoxic basin of freshwater perennially frozen lake

ncbi_organism_name: Methanoregulaceae archaeon UXB-2016

ncbi_submitter: Georgetown University


ncbi_organism_name: Nitrososphaeraceae archaeon

ncbi_submitter: Colorado State University


ncbi_organism_name: Nitrososphaerota archaeon

ncbi_submitter: The University of Texas at Austin


ncbi_submitter: Linnaeus University


ncbi_organism_name: uncultured Methanobacteriaceae archaeon

ncbi_submitter: Center for Microbial Communities


ncbi_organism_name: uncultured Candidatus Poseidoniales archaeon

ncbi_submitter: WOODS HOLE OCEANOGRAPHIC INSTITUTION


ncbi_organism_name: Pyrobaculum sp.


ncbi_isolation_source: marine

ncbi_organism_name: Candidatus Thalassarchaeaceae archaeon

ncbi_taxonomy_unfiltered: d__Archaea;x__Methanobacteriati;p__Thermoplasmatota;c__Candidatus Poseidoniia;o__Candidatus Poseidoniales;f__Candidatus Thalassarchaeaceae;x__unclassified Candidatus Thalassarchaeaceae;s__Candidatus Thalassarchaeaceae archaeon


ncbi_country: Russia: Bykovsky Peninsula;Polar Fox Lagoon

ncbi_isolation_source: Polar Fox Lagoon sediment taken using 3m corer (60 mm diameter)

ncbi_submitter: Radboud University Nijmegen


ncbi_country: USA: Yellowstone National Park

ncbi_isolation_source: Hot spring water

ncbi_organism_name: Thermofilales archaeon


ncbi_country: USA

ncbi_isolation_source: NEUS_F1 leachate from a leachate well at an active municipal landfill in the North Eastern United States

ncbi_organism_name: Methanomicrobium sp.

ncbi_submitter: University of Waterloo


ncbi_country: Pacific Ocean

ncbi_isolation_source: deep-sea hydrothermal deposit

ncbi_organism_name: Thermodiscus sp.

ncbi_submitter: Portland State University


ncbi_country: Germany: Zoo Saarbruecken

ncbi_isolation_source: feces

ncbi_organism_name: Methanosarcina mazei

ncbi_submitter: Center for Bioinformatics


ncbi_organism_name: uncultured archaeon


ncbi_country: China: Guangxi; Dashan

ncbi_isolation_source: sediment

ncbi_organism_name: Candidatus Parvarchaeota archaeon

ncbi_submitter: an eLibrary of Microbial Systematics and Genomics

ncbi_taxonomy_unfiltered: d__Archaea;x__Nanobdellati;p__Candidatus Parvarchaeota;x__unclassified Candidatus Parvarchaeota;s__Candidatus Parvarchaeota archaeon


ncbi_organism_name: Saccharolobus sp.

ncbi_submitter: Montana State University


ncbi_country: USA: Angelo; CA

ncbi_isolation_source: soil

ncbi_organism_name: Nitrososphaera sp. UBA217

ncbi_submitter: University of Queensland


ncbi_organism_name: Candidatus Woesearchaeota archaeon


ncbi_organism_name: Candidatus Bathyarchaeia archaeon

ncbi_taxonomy_unfiltered: d__Archaea;x__Thermoproteati;p__Candidatus Bathyarchaeota;c__Candidatus Bathyarchaeia;x__unclassified Candidatus Bathyarchaeia;s__Candidatus Bathyarchaeia archaeon


ncbi_isolation_source: NEUS_B leachate from a leachate well at an active municipal landfill in the North Eastern United States

ncbi_organism_name: Candidatus Nanoarchaeia archaeon

ncbi_taxonomy_unfiltered: d__Archaea;x__Nanobdellati;p__Nanobdellota;c__Candidatus Nanoarchaeia;x__unclassified Candidatus Nanoarchaeia;s__Candidatus Nanoarchaeia archaeon


ncbi_organism_name: Desulfurococcaceae archaeon


ncbi_organism_name: uncultured Nitrososphaerota archaeon

ncbi_taxonomy_unfiltered: d__Archaea;x__Thermoproteati;p__Nitrososphaerota;x__environmental samples;s__uncultured Nitrososphaerota archaeon


ncbi_organism_name: Candidatus Pacearchaeota archaeon

ncbi_taxonomy_unfiltered: d__Archaea;x__Nanobdellati;x__Candidatus Pacearchaeota;x__unclassified Candidatus Pacearchaeota;s__Candidatus Pacearchaeota archaeon


ncbi_organism_name: Thermoplasmata archaeon

ncbi_submitter: Watershed Function Science Focus Area


ncbi_organism_name: Sulfolobales archaeon


ncbi_organism_name: Methanothrix sp.

ncbi_submitter: CLUE-TERRA


ncbi_country: China: Inner Mongolia

ncbi_isolation_source: Brine and surface sediment

ncbi_organism_name: Nanobdellati archaeon

ncbi_submitter: Institute of Microbiology, Chinese Academy of Sciences


ncbi_country: China: Guangxi; Longshenao

ncbi_organism_name: Candidatus Micrarchaeota archaeon


ncbi_organism_name: Candidatus Aenigmatarchaeota archaeon

ncbi_submitter: Tsinghua University

ncbi_taxonomy_unfiltered: d__Archaea;x__Nanobdellati;p__Candidatus Aenigmatarchaeota;x__unclassified Candidatus Aenigmatarchaeota;s__Candidatus Aenigmatarchaeota archaeon


ncbi_organism_name: Caldivirga sp.

ncbi_submitter: Research Center of Biotechnology RAS


ncbi_country: France: Besse-et-Saint-Anastaise; Lac Pavin

ncbi_isolation_source: lake sediment

ncbi_submitter: Jill Banfield's Lab at Berkeley


ncbi_organism_name: Methanobrevibacter smithii

ncbi_submitter: EMG


ncbi_isolation_source: Blood

ncbi_submitter: URMITE


ncbi_isolation_source: saline water (ENVO:00002010); including plankton (ENVO:xxxxxxxx)

ncbi_organism_name: Euryarchaeota archaeon UBA496

ncbi_taxonomy_unfiltered: d__Archaea;x__Methanobacteriati;p__Thermoplasmatota;c__Candidatus Poseidoniia;o__Candidatus Poseidoniales;x__unclassified Candidatus Poseidoniales;s__Euryarchaeota archaeon UBA496


ncbi_country: China: Guizhou; Fuquan


ncbi_submitter: Institute of Clinical Molecular Biology, University of Kiel, Germany


ncbi_country: Pacific Ocean: Coastal California

ncbi_isolation_source: seawater

ncbi_organism_name: Candidatus Nitrosomarinus catalinensis

ncbi_submitter: University of Southern California


ncbi_country: China: Guangdong; Daobaoshan


ncbi_country: Mexico: Guaymas basin

ncbi_isolation_source: hydrothermal chimney sample

ncbi_organism_name: Thermococcus radiotolerans

ncbi_submitter: Ecole Normale Superieure de Lyon


ncbi_organism_name: uncultured archaeon

ncbi_submitter: Centre for Microbiome Research


ncbi_organism_name: Methanothermobacter thermautotrophicus

ncbi_submitter: Helmholtz Centre for Environmental Research - UFZ


ncbi_country: China: Dabaoshan Pyrite-Copper Mine; Guangdong Province

ncbi_isolation_source: acid mine drainage sediment

ncbi_submitter: Sun Yat-sen University, Guangzhou


ncbi_submitter: University of Illinois Urbana-Champaign


ncbi_country: China: Guizhou; Jiuan

ncbi_submitter: an eLibrary of Microbial Systematics and Genomics


ncbi_organism_name: uncultured Methanosarcinales archaeon


ncbi_country: USA: Massachusetts

ncbi_organism_name: Nitrososphaerota archaeon

ncbi_submitter: University of Massachusetts Amherst


ncbi_isolation_source: NEUS_D1 leachate from a leachate well at an active municipal landfill in the North Eastern United States

ncbi_organism_name: Candidatus Methanoperedens sp.

ncbi_submitter: University of Waterloo

ncbi_taxonomy_unfiltered: d__Archaea;x__Methanobacteriati;p__Methanobacteriota;x__Stenosarchaea group;c__Methanomicrobia;o__Methanosarcinales;x__ANME-2 cluster;f__Candidatus Methanoperedentaceae;g__Candidatus Methanoperedens;x__unclassified Candidatus Methanoperedens;s__Candidatus Methanoperedens sp.


ncbi_country: Canada: Vancouver; Saanich Inlet

ncbi_isolation_source: hypoxic seawater

ncbi_organism_name: Candidatus Woesearchaeota archaeon

ncbi_submitter: The University of Melbourne


ncbi_country: Malaysia: Sungkai; Perak

ncbi_isolation_source: alkaline hot spring water

ncbi_organism_name: Ignisphaera sp.

ncbi_submitter: Universiti Teknologi Malaysia - Malaysia


ncbi_isolation_source: Enrichment slurry

ncbi_organism_name: Methanobacterium sp. ERen5

ncbi_submitter: GFZ German Research Centre for Geosciences


ncbi_organism_name: Methanobacteriota archaeon


ncbi_organism_name: Candidatus Poseidoniaceae archaeon

ncbi_submitter: Evolutionary Genomics Group

ncbi_taxonomy_unfiltered: d__Archaea;x__Methanobacteriati;p__Thermoplasmatota;c__Candidatus Poseidoniia;o__Candidatus Poseidoniales;f__Candidatus Poseidoniaceae;x__unclassified Candidatus Poseidoniaceae;s__Candidatus Poseidoniaceae archaeon


ncbi_organism_name: Thermosphaera sp.

ncbi_submitter: The University of Texas at Austin


ncbi_isolation_source: pig gut metagenome

ncbi_organism_name: Methanobrevibacter ruminantium

ncbi_submitter: EMG


ncbi_organism_name: Sulfolobaceae archaeon

ncbi_submitter: Montana State University


ncbi_country: China: Maanshan Magnetite Mine; Anhui Province

ncbi_organism_name: Candidatus Micrarchaeota archaeon


ncbi_country: China: Guangdong; Yunfu

ncbi_organism_name: Ferroplasmaceae archaeon


ncbi_organism_name: Candidatus Bathyarchaeia archaeon


ncbi_organism_name: archaeon

ncbi_submitter: Zhejiang University


ncbi_country: Pacific Ocean:Eastern Tropical North Pacific ODZ

ncbi_isolation_source: anoxic seawater

ncbi_organism_name: Candidatus Thalassarchaeaceae archaeon

ncbi_submitter: Massachusetts Institute of Technology


ncbi_country: Atlantic Ocean:Southern Atlantic Ocean

ncbi_isolate: ATL

ncbi_isolation_source: seawater from Antarctic Bottom Water

ncbi_strain_identifiers: ATL

ncbi_submitter: Virginia Tech


ncbi_organism_name: uncultured Thermoprotei archaeon


ncbi_country: USA: Rifle; CO

ncbi_isolation_source: groundwater

ncbi_submitter: The University of Queensland


ncbi_assembly_name: Rumen uncultured genome RUG236

ncbi_organism_name: uncultured Methanobrevibacter sp.

ncbi_submitter: THE ROSLIN INSTITUTE


ncbi_country: Pacific Ocean

ncbi_isolation_source: deep-sea hydrothermal deposit

ncbi_submitter: Portland State University


ncbi_organism_name: Methanobacteriales archaeon


ncbi_country: China: Anhui; Wuhu

ncbi_isolation_source: sediment

ncbi_organism_name: Ferroplasma sp.


ncbi_country: Pacific Ocean: Brothers volcano

ncbi_isolation_source: marine hydrothermal vent

ncbi_organism_name: Desulfurococcales archaeon


ncbi_country: United Kingdom

ncbi_isolation_source: river sediment

ncbi_organism_name: Nitrososphaerales archaeon TH703

ncbi_submitter: University of Aberdeen


ncbi_country: USA

ncbi_isolation_source: microaeration digestion Rep1

ncbi_organism_name: Methanobrevibacter sp.

ncbi_submitter: Imperial College London


ncbi_organism_name: Thermoplasmatota archaeon

ncbi_submitter: Southern University of Science and Technology


ncbi_organism_name: Acidilobus sp.


ncbi_country: China: Guangdong

ncbi_isolation_source: Fankou acid mine drainage sediment Core A

ncbi_submitter: Sun Yat-Sen University


ncbi_organism_name: Candidatus Bathyarchaeota archaeon

ncbi_submitter: Center for Microbial Communities

ncbi_taxonomy_unfiltered: d__Archaea;x__Thermoproteati;p__Candidatus Bathyarchaeota;x__unclassified Candidatus Bathyarchaeota;s__Candidatus Bathyarchaeota archaeon


ncbi_country: Cameroon: Ebogo II; Mbalmayo

ncbi_isolation_source: termite gut

ncbi_organism_name: Nitrososphaerota archaeon

ncbi_submitter: Max Planck Institute for Terrestrial Microbiology


ncbi_submitter: Centre for Microbiome Research


ncbi_country: Mexico: Guaymas Basin; Gulf of California

ncbi_isolation_source: marine sediment sample collected by push cores at a deep sea vent site during cruise AT15-25 on Alvin dive 4358; sediment was oily and the sediment surface was covered with a white microbial mat

ncbi_organism_name: Candidatus Bathyarchaeota archaeon B23

ncbi_submitter: Shanghai Jiao Tong University

ncbi_taxonomy_unfiltered: d__Archaea;x__Thermoproteati;p__Candidatus Bathyarchaeota;x__unclassified Candidatus Bathyarchaeota;s__Candidatus Bathyarchaeota archaeon B23


ncbi_country: Netherlands: Wageningen; Gelderland

ncbi_isolate: MAG 286

ncbi_isolation_source: granular sludge from mesophilic upflow sludge blanket reactor

ncbi_organism_name: Methanobacterium sp.

ncbi_strain_identifiers: MAG 286

ncbi_submitter: DOE Joint Genome Institute


ncbi_organism_name: Nanobdellota archaeon

ncbi_submitter: Bigelow Laboratory For Ocean Sciences


ncbi_organism_name: Acidilobaceae archaeon

ncbi_submitter: The University of Texas at Austin


ncbi_organism_name: uncultured Desulfurococcales archaeon


ncbi_organism_name: Candidatus Woesearchaeota archaeon

ncbi_submitter: Biology Meets Subduction, Deep Carbon Observatory


ncbi_organism_name: Halorubrum rutilum

ncbi_submitter: Institution of Microbiology, Chinese Academy of Science(WDCM)


ncbi_organism_name: Candidatus Bathyarchaeia archaeon


ncbi_submitter: Zhejiang University


ncbi_organism_name: uncultured Methanosarcinales archaeon


ncbi_organism_name: Pyrobaculum sp.

ncbi_submitter: Nanjing Agricultural University


ncbi_country: Atlantic Ocean: Hydrothermal vent field near the Jan Mayen Island

ncbi_isolation_source: In situ enriched (krill shells) hydrothermal sediments; deepest chamber of perforated titanium incubators with 3 chambers deployed for one year;74 C at 20 centimeters below seafloor; chamber nr.3

ncbi_organism_name: Thermoproteota archaeon

ncbi_submitter: University of Bergen


ncbi_country: Saudi Arabia: Red Sea

ncbi_isolation_source: marine water sample

ncbi_organism_name: Methanobacteriota archaeon

ncbi_submitter: Tara Oceans Consortium


ncbi_organism_name: Candidatus Micrarchaeota archaeon


ncbi_country: Pacific Ocean: Okinawa Trough

ncbi_isolation_source: Hydrothermal vent sediments

ncbi_submitter: The Institute of Oceanology, Chinese Academy of Science


ncbi_country: USA: Yellowstone National Park

ncbi_isolation_source: NG05 hot spring; Norris Geyser Basin

ncbi_organism_name: Sulfolobus acidocaldarius

ncbi_submitter: University of Illinois at Urbana-Champaign


ncbi_submitter: The University of Queensland


ncbi_organism_name: Nitrososphaeraceae archaeon


ncbi_organism_name: Haloterrigena salinisoli

ncbi_submitter: Jiangsu University


ncbi_country: China: Rongcheng Nation Swan Nature Reserve

ncbi_isolation_source: coastal marine sediment

ncbi_submitter: Shenzhen Univeristy


ncbi_country: China: Guizhou; Jiuan

ncbi_organism_name: Thermoplasmata archaeon

ncbi_submitter: an eLibrary of Microbial Systematics and Genomics


ncbi_organism_name: Candidatus Hadarchaeales archaeon


ncbi_country: China: Guangdong; Yunfu

ncbi_organism_name: Candidatus Parvarchaeota archaeon


ncbi_organism_name: Candidatus Caldarchaeum sp.

ncbi_taxonomy_unfiltered: d__Archaea;x__Thermoproteati;p__Nitrososphaerota;x__Nitrososphaerota incertae sedis;o__Candidatus Caldarchaeales;f__Candidatus Caldarchaeaceae;g__Candidatus Caldarchaeum;x__unclassified Candidatus Caldarchaeum;s__Candidatus Caldarchaeum sp.


ncbi_organism_name: Methanolinea sp.

ncbi_submitter: University of Utah


ncbi_country: USA: Yellowstone National Park; Cistern Spring

ncbi_isolation_source: water and sediment

ncbi_organism_name: Acidilobus sp. 7A

ncbi_submitter: Oak Ridge National Laboratory


ncbi_country: USA: Yellowstone National Park; WY

ncbi_isolation_source: hot spring sediment

ncbi_organism_name: Candidatus Methanomethylicia archaeon

ncbi_submitter: Montana State University


ncbi_organism_name: Halobacteriales archaeon

ncbi_submitter: Grupo de Microbiologia Integrativa, Facultad de Ciencias, Universidad de Chile


ncbi_country: Canada: Alberta

ncbi_isolation_source: groundwater

ncbi_organism_name: archaeon

ncbi_submitter: University of Calgary


ncbi_organism_name: Candidatus Bathyarchaeia archaeon

ncbi_submitter: The University of Texas at Austin


ncbi_organism_name: Salinigranum sp.

ncbi_submitter: University of Queensland


ncbi_organism_name: Thermoplasmatales archaeon


ncbi_country: China: Inner Mongolia

ncbi_isolation_source: salt field sediment

ncbi_organism_name: Halosolutus amylolyticus


ncbi_organism_name: Nitrosarchaeum sp.

ncbi_submitter: Monash University


ncbi_organism_name: Candidatus Hermodarchaeota archaeon

ncbi_submitter: East china normal University

ncbi_taxonomy_unfiltered: d__Archaea;x__Promethearchaeati;p__Candidatus Hermodarchaeota;x__unclassified Candidatus Hermodarchaeota;s__Candidatus Hermodarchaeota archaeon


ncbi_organism_name: uncultured archaeon

ncbi_submitter: Centre for Microbiome Research


ncbi_submitter: Chengdu Biogas Institute, Ministry of Agriculture and Rural Affairs

ncbi_taxonomy: d__Archaea;p__Thermoproteota;c__Methanosuratincolia;o__Candidatus Methanomethylicales;f__Candidatus Methanomethylicaceae;g__Candidatus Methanosuratincola (ex Vanwonterghem et al. 2016);s__Candidatus Methanosuratincola petrocarbonis

ncbi_taxonomy_unfiltered: d__Archaea;x__Thermoproteati;p__Thermoproteota;c__Methanosuratincolia;o__Candidatus Methanomethylicales;f__Candidatus Methanomethylicaceae;g__Candidatus Methanosuratincola (ex Vanwonterghem et al. 2016);s__Candidatus Methanosuratincola petrocarbonis (ex Vanwonterghem et al. 2016)


ncbi_organism_name: Thermogladius sp.

ncbi_submitter: Research Center of Biotechnology RAS


ncbi_organism_name: Halobacterium sp.

ncbi_submitter: Xiamen University


ncbi_country: China: Guangxi; Longshenao

ncbi_isolation_source: sediment

ncbi_organism_name: Candidatus Micrarchaeota archaeon

ncbi_taxonomy_unfiltered: d__Archaea;x__Nanobdellati;p__Candidatus Micrarchaeota;x__unclassified Candidatus Micrarchaeota;s__Candidatus Micrarchaeota archaeon


ncbi_assembly_name: IMG-taxon 2619618990 annotated assembly

ncbi_organism_name: Halogranum rubrum

ncbi_submitter: DOE - JOINT GENOME INSTITUTE


ncbi_organism_name: Methanofastidiosum sp.

ncbi_submitter: CLUE-TERRA

ncbi_taxonomy_unfiltered: d__Archaea;x__Methanobacteriati;p__Methanobacteriota;x__Stenosarchaea group;c__Candidatus Methanofastidiosia;o__Candidatus Methanofastidiosales;f__Candidatus Methanofastidiosaceae;g__Candidatus Methanofastidiosum;x__unclassified Candidatus Methanofastidiosum;s__Methanofastidiosum sp.


ncbi_organism_name: Haloarcula onubensis

ncbi_submitter: University of Sevilla, Spain


ncbi_organism_name: Candidatus Bilamarchaeum sp.

ncbi_submitter: Zhejiang University

ncbi_taxonomy: d__Archaea;p__Candidatus Micrarchaeota;c__Candidatus Micrarchaeia;o__Candidatus Anstonellales;f__Candidatus Bilamarchaeaceae;g__Candidatus Bilamarchaeum;s__

ncbi_taxonomy_unfiltered: d__Archaea;x__Nanobdellati;p__Candidatus Micrarchaeota;c__Candidatus Micrarchaeia;o__Candidatus Anstonellales;f__Candidatus Bilamarchaeaceae;g__Candidatus Bilamarchaeum;x__unclassified Candidatus Bilamarchaeum;s__Candidatus Bilamarchaeum sp.