annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: National Center for Biotechnology Information

assembly_level: Contig

assembly_type: haploid

excluded_from_refseq: from large multi-isolate project

genome_rep: Full

group: bacteria

organism_name: Enterococcus faecium

release_type: Major

version_status: latest


asm_submitter: Erciyes University

assembly_level: Scaffold

organism_name: Pseudomonas pisciculturae

paired_asm_comp: identical

refseq_category: reference genome

relation_to_type_material: assembly from type material


organism_name: Pseudomonas neuropathica


organism_name: Pseudomonas mucoides


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


asm_submitter: CDC

organism_name: Escherichia coli


organism_name: Salmonella enterica


asm_submitter: FDA/CFSAN


annotation_name: Annotation submitted by Kyushu University

annotation_provider: Kyushu University

asm_submitter: Kyushu University

excluded_from_refseq: unverified source organism

organism_name: Pseudomonas cichorii


infraspecific_name: strain=MAFF 302698


infraspecific_name: strain=MAFF 301184


infraspecific_name: strain=MAFF 301764


infraspecific_name: strain=MAFF 302096


infraspecific_name: strain=LMG 2162


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


annotation_name: Annotation submitted by Social Molecular Epidemiology, Department of Food and Human Health Sciences, Graduate School of Human Life Science, Osaka City University

organism_name: Mycobacterium kansasii


annotation_name: Annotation submitted by Japan International Research Center for Agricultural Sciences

organism_name: Insulibacter thermoxylanivorax


annotation_name: Annotation submitted by Department of Civil Engineering, National Institute of Technology, Wakayama college

excluded_from_refseq: genus undefined

organism_name: Cytophagales bacterium WSM2-2


annotation_name: Annotation submitted by Graduate School of Life and Environmental Sciences, Osaka Prefecture University


annotation_provider: Graduate School of Life and Environmental Sciences, Osaka Prefecture University


asm_submitter: Graduate School of Life and Environmental Sciences, Osaka Prefecture University


asm_submitter: Bioconversion Group, Research Institute for Sustainable Chemistry, Materials and Chemistry, National Institute of Advanced Industrial Science and Technology

organism_name: Enterobacter oligotrophicus


annotation_name: Annotation submitted by Bioconversion Group, Research Institute for Sustainable Chemistry, Materials and Chemistry, National Institute of Advanced Industrial Science and Technology

organism_name: Klebsiella pneumoniae


organism_name: Paenibacillus glycanilyticus subsp. hiroshimensis


asm_submitter: Center for Food Safety and Applied Nutrition


asm_submitter: Public Health Agency of Canada

organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Enterococcus faecium


asm_submitter: FDA Center for Food Safety and Applied Nutrition

infraspecific_name: strain=FSL N3-0795


infraspecific_name: strain=FSL N3-0339


infraspecific_name: strain=FSL N3-0327


infraspecific_name: strain=FSL N3-0797


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


asm_submitter: National Chung Cheng University

assembly_level: Complete Genome

infraspecific_name: strain=GOKU

organism_name: Proteus sp. GOKU


asm_submitter: University of Arkansas for Medical Sciences

infraspecific_name: strain=LAC

organism_name: Staphylococcus aureus LAC


asm_submitter: Justus-Liebig-University Giessen

infraspecific_name: strain=HNCMB 20080

organism_name: Shigella dysenteriae


asm_submitter: New England Biolabs


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica


infraspecific_name: strain=FSL N3-0776


asm_submitter: University of Illinois Urbana-Champaign

infraspecific_name: strain=NRRL B-1677

organism_name: Streptomyces sp. NRRL B-1677


infraspecific_name: strain=NRRL ISP-5604

organism_name: Streptomyces eurocidicus


asm_submitter: ABI Group

organism_name: Sphingopyxis solisilvae


asm_submitter: Chinese Center for Disease Control and Prevention

organism_name: Actinomyces trachealis


annotation_name: Annotation submitted by Universidad El Bosque

annotation_provider: Universidad El Bosque

asm_submitter: Universidad El Bosque

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins


asm_submitter: USDA

infraspecific_name: strain=Red Oak 2

organism_name: Xylella fastidiosa subsp. multiplex


organism_name: Xylella fastidiosa subsp. fastidiosa


asm_submitter: microbial pathogenic ecology group

organism_name: Klebsiella variicola


asm_submitter: World Institute of Kimchi

organism_name: Lacticaseibacillus paracasei subsp. tolerans


organism_name: Lacticaseibacillus casei


asm_submitter: Quanzhou Normal University

organism_name: Aegicerativicinus sediminis


asm_submitter: Freie Universitaet Berlin

organism_name: Mesomycoplasma hyorhinis


asm_submitter: Brno University of Technology

infraspecific_name: strain=DSM 15344

organism_name: Caldimonas thermodepolymerans


asm_submitter: Jilin Agriculture University

excluded_from_refseq: unverified source organism; annotation fails completeness check

organism_name: Lactococcus lactis subsp. lactis


asm_submitter: Nanjing Forestry University

organism_name: Pseudomonas fragi


asm_submitter: Monash University

organism_name: Enterococcus faecium


annotation_name: Annotation submitted by University of Rhode Island

annotation_provider: University of Rhode Island

asm_submitter: University of Rhode Island

organism_name: Rickettsia endosymbiont of Cardiosporidium cionae


asm_submitter: MACS Agharkar Research Institute

organism_name: Methylobacter sp. BlB1


asm_submitter: shandong university

organism_name: Flavobacterium sp. J49


asm_submitter: The First Affiliated Hospital of Sun Yat-sen University, Guangzhou, China

organism_name: Chryseobacterium indologenes


asm_submitter: BioPS Co., Ltd.

organism_name: Rouxiella silvae


asm_submitter: China CDC

organism_name: Tuanshanicoccus lijuaniae


asm_submitter: The Chinese University of Hong Kong

organism_name: Klebsiella pneumoniae


asm_submitter: State Key Laboratory of Biogeology and Environmental Geology

infraspecific_name: strain=CUG 91378

organism_name: Aquiflexum lacus


organism_name: Enterobacter hormaechei


asm_submitter: Columbia University Medical Center


organism_name: Escherichia coli


excluded_from_refseq: contaminated


organism_name: Klebsiella quasipneumoniae


asm_submitter: Chinese PLA Center for Disease Control and Prevention

organism_name: Nocardia cyriacigeorgica


organism_name: Nocardia nova


organism_name: Nocardia brasiliensis


organism_name: Nocardia terpenica


organism_name: Nocardia otitidiscaviarum


organism_name: Nocardia beijingensis


organism_name: Nocardia farcinica


organism_name: Nocardia puris


organism_name: Streptomyces gardneri


organism_name: Nocardia abscessus


organism_name: Nocardia blacklockiae


excluded_from_refseq: contaminated; unverified source organism


organism_name: Nocardia elegans


organism_name: Nocardia amamiensis


organism_name: Nocardia transvalensis


organism_name: Nocardia flavorosea


organism_name: Nocardia higoensis


asm_submitter: Georg-August University Goettingen

excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Ktedonobacterales bacterium


organism_name: Thermaceae bacterium


organism_name: Binataceae bacterium (SeqCode)


organism_name: Acidimicrobiales bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Chloroflexota bacterium


asm_submitter: North-west University

excluded_from_refseq: derived from metagenome

organism_name: Sphingorhabdus sp.


organism_name: Flavobacterium sp.


organism_name: Fermentimonas sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Chryseobacterium sp.


organism_name: Patulibacter sp.


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Stutzerimonas stutzeri


organism_name: Proteiniphilum sp.


organism_name: Candidimonas sp.


organism_name: Comamonas sp.


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Planococcus sp. (in: firmicutes)


asm_submitter: Public Health Agency of Canada

organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: CDC

organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


asm_submitter: FDA Center for Food Safety and Applied Nutrition

infraspecific_name: strain=FSL N3-0806

organism_name: Listeria monocytogenes


asm_submitter: FDA/CFSAN


infraspecific_name: strain=FSL N3-0348


infraspecific_name: strain=FSL N3-0344


infraspecific_name: strain=FSL N3-0689


organism_name: Escherichia coli


infraspecific_name: strain=FSL N3-0772


asm_submitter: Center for Food Safety and Applied Nutrition


asm_submitter: FDA


asm_submitter: Health Protection Agency


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Mississippi


organism_name: Salmonella enterica subsp. enterica serovar Virchow


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica


organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Salmonella enterica subsp. enterica serovar Plymouth


organism_name: Salmonella enterica subsp. enterica serovar Durban


infraspecific_name: strain=FSL N3-0766


infraspecific_name: strain=FSL N3-0495


infraspecific_name: strain=FSL N4-0045


organism_name: Salmonella enterica subsp. enterica serovar Newport


asm_submitter: KAUST

organism_name: Mangrovibacillus cuniculi


asm_submitter: Academia Sinica

organism_name: Prosthecochloris sp.


organism_name: Salmonella enterica


organism_name: Halodesulfovibrio sp.


organism_name: Kaustia mangrovi


asm_submitter: BB-NCIPD Ltd., Sofia, Bulgaria

infraspecific_name: strain=BCG SL 222 Sofia

organism_name: Mycobacterium tuberculosis variant bovis BCG


asm_submitter: University of Pittsburgh

organism_name: Vibrio cholerae C6706


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Ohio


organism_name: Escherichia coli


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


infraspecific_name: strain=FSL N3-0329

organism_name: Listeria monocytogenes


infraspecific_name: strain=FSL N3-0794


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Liverpool


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


infraspecific_name: strain=FSL N3-0338


infraspecific_name: strain=FSL N4-0034


asm_submitter: Portland State University

organism_name: Hydrogenovibrio sp.


organism_name: Sulfurimonas sp.


organism_name: Helicobacteraceae bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Caldifarciminota bacterium


organism_name: Nitrospirota bacterium


organism_name: Anaerolineales bacterium


organism_name: Sulfurovum sp.


organism_name: Thermoflexales bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Cyclobacteriaceae bacterium


organism_name: bacterium


organism_name: Ardenticatenaceae bacterium


organism_name: Desulfobulbaceae bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Aquificaceae bacterium


organism_name: Hydrogenimonas sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Paracoccaceae bacterium


organism_name: Mariprofundus sp.


organism_name: Oceanithermus sp.


organism_name: Planctomycetales bacterium


organism_name: Lysobacterales bacterium


organism_name: Robiginitomaculum sp.


organism_name: Parvularculaceae bacterium


organism_name: Nitrospirota bacterium


organism_name: Anaerolineales bacterium


organism_name: Chitinophagales bacterium


organism_name: bacterium


organism_name: Kordiimonadales bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Anaerolineae bacterium


organism_name: Planctomycetota bacterium


organism_name: Planctomycetaceae bacterium


organism_name: Patescibacteria group bacterium


organism_name: Candidatus Zhuqueibacterota bacterium


organism_name: Candidatus Dojkabacteria bacterium


organism_name: Candidatus Microgenomates bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Candidatus Altimarinota bacterium


organism_name: Desulfurellaceae bacterium


organism_name: Caldisericales bacterium


organism_name: Nitratifractor sp.


organism_name: Thermovibrio sp.


organism_name: Sulfurovum sp.


organism_name: Candidatus Bipolaricaulota bacterium


organism_name: Aquificota bacterium


organism_name: Mesoaciditoga sp.


organism_name: Acidobacteriota bacterium


organism_name: Thermotogae bacterium


organism_name: Lentisphaeria bacterium


organism_name: Mesoaciditogaceae bacterium


organism_name: Armatimonadota bacterium


organism_name: Bacteroidales bacterium


organism_name: Anaerolineae bacterium


organism_name: Calditrichaceae bacterium


organism_name: Candidatus Microgenomates bacterium


organism_name: bacterium


organism_name: Phycisphaerae bacterium


organism_name: Desulfobulbaceae bacterium


organism_name: Desulfuromusa sp.


organism_name: Pseudomonadota bacterium


organism_name: Thiotrichaceae bacterium


organism_name: Kiritimatiellales bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Patescibacteria group bacterium


organism_name: Candidatus Omnitrophota bacterium


organism_name: Brevinematales bacterium


organism_name: Caldifarciminota bacterium


organism_name: Sulfurovum sp.


organism_name: Hippea sp.


organism_name: Bacteroidales bacterium


organism_name: Thermoflexales bacterium


organism_name: Anaerolineae bacterium


organism_name: Spirochaetaceae bacterium


organism_name: Melioribacteraceae bacterium


organism_name: Desulfobacteraceae bacterium


organism_name: Desulfurellaceae bacterium


organism_name: Nitratifractor sp.


organism_name: Thiomicrorhabdus sp.


organism_name: Thermovibrio sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Caldisericales bacterium


organism_name: Kapaibacterium sp. (SeqCode)


organism_name: Mesoaciditoga lauensis


organism_name: Paracoccaceae bacterium


organism_name: Campylobacterales bacterium


organism_name: Alteromonadaceae bacterium


organism_name: Sulfurimonas sp.


organism_name: Parvularculaceae bacterium


organism_name: Hydrogenothermaceae bacterium


organism_name: Aquificaceae bacterium


organism_name: Oceanithermus sp.


organism_name: Aquifex sp.


organism_name: Candidatus Bipolaricaulota bacterium


organism_name: Persephonella sp.


organism_name: Thiomicrorhabdus sp.


organism_name: Hyphomicrobiales bacterium


organism_name: Mariprofundaceae bacterium


organism_name: Phycisphaerales bacterium


organism_name: Mariprofundales bacterium


organism_name: Aquificales bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Rhodothermus sp.


organism_name: Thermosulfurimonas sp.


organism_name: Chitinophagales bacterium


organism_name: Patescibacteria group bacterium


organism_name: Acidobacteriota bacterium


organism_name: Albidovulum sp.


organism_name: Planctomycetaceae bacterium


organism_name: Aquificaceae bacterium


organism_name: Rhodospirillales bacterium


organism_name: Candidatus Zhuqueibacterota bacterium


organism_name: Caldifarciminota bacterium


organism_name: Ardenticatena sp.


organism_name: Hyphomicrobiales bacterium


organism_name: Candidatus Dojkabacteria bacterium


organism_name: Helicobacteraceae bacterium


organism_name: Anaerolineales bacterium


organism_name: Mariprofundaceae bacterium


organism_name: Planctomycetales bacterium


organism_name: bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Thermovibrio sp.


organism_name: Patescibacteria group bacterium


organism_name: Thermaceae bacterium


organism_name: Hydrogenimonas sp.


organism_name: Cyclobacteriaceae bacterium


organism_name: Nitratifractor sp.


organism_name: Thiomicrorhabdus sp.


organism_name: Sulfurimonas sp.


organism_name: Bacteroidales bacterium


organism_name: Helicobacteraceae bacterium


organism_name: Campylobacteraceae bacterium


organism_name: Marinosulfonomonas sp.


organism_name: Flavobacteriales bacterium


organism_name: Crocinitomicaceae bacterium


organism_name: Campylobacterota bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Candidatus Altimarinota bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Mesoaciditoga sp.


organism_name: Thermotogaceae bacterium


organism_name: Mariprofundaceae bacterium


organism_name: Oceanithermus sp.


organism_name: Deltaproteobacteria bacterium


organism_name: Caldifarciminota bacterium


organism_name: Campylobacterales bacterium


organism_name: Acidobacteriota bacterium


organism_name: Thiolapillus sp.


organism_name: Anaerolineales bacterium


organism_name: Anaerolineae bacterium


organism_name: Bacteroidales bacterium


organism_name: bacterium


organism_name: Desulfobulbaceae bacterium


organism_name: Candidatus Dojkabacteria bacterium


organism_name: Patescibacteria group bacterium


organism_name: Hydrogenothermaceae bacterium


organism_name: Campylobacterota bacterium


organism_name: Aquificales bacterium


organism_name: Aquificota bacterium


organism_name: Nitratifractor sp.


organism_name: Candidatus Atribacteria bacterium


organism_name: Caldisericales bacterium


organism_name: Thermodesulfobacteriaceae bacterium


organism_name: Thermaceae bacterium


organism_name: Thermotogaceae bacterium


organism_name: Calditrichaceae bacterium


organism_name: Mesoaciditoga sp.


organism_name: Desulfurellaceae bacterium


organism_name: Thermopetrobacter sp.


organism_name: Aquificaceae bacterium


organism_name: Saprospiraceae bacterium


organism_name: Thermovibrio sp.


organism_name: Candidatus Zhuqueibacterota bacterium


organism_name: Caldifarciminota bacterium


organism_name: Sulfurivirga sp.


organism_name: Hydrogenimonas sp.


organism_name: Sulfurovum sp.


organism_name: Parvularculaceae bacterium


organism_name: Candidatus Bipolaricaulota bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Thermaceae bacterium


organism_name: Hyphomicrobiales bacterium


organism_name: Bacteroidota bacterium


organism_name: Alteromonadaceae bacterium


organism_name: Thermodesulfobacteriales bacterium


organism_name: Rhodospirillales bacterium


organism_name: Hydrogenothermaceae bacterium


organism_name: Saprospiraceae bacterium


organism_name: Kapaibacterium sp. (SeqCode)


organism_name: Phycisphaerales bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Planctomycetaceae bacterium


organism_name: Thiotrichaceae bacterium


organism_name: Albidovulum sp.


organism_name: Acidimicrobiia bacterium


organism_name: Ardenticatena sp.


organism_name: Anaerolineae bacterium


organism_name: Patescibacteria group bacterium


organism_name: Cyclobacteriaceae bacterium


organism_name: bacterium


organism_name: Myxococcales bacterium


organism_name: Candidatus Dojkabacteria bacterium


organism_name: Candidatus Microgenomates bacterium


organism_name: Ardenticatenaceae bacterium


organism_name: Aquificales bacterium


organism_name: Aquificaceae bacterium


organism_name: Nitratiruptor sp.


organism_name: Thermosulfurimonas sp.


organism_name: Deltaproteobacteria bacterium


organism_name: Hyphomicrobiales bacterium


organism_name: Candidatus Zhuqueibacterota bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Parvularculaceae bacterium


organism_name: Anaerolineales bacterium


organism_name: Alteromonadaceae bacterium


organism_name: Nitrospirota bacterium


organism_name: Saprospiraceae bacterium


organism_name: Kapaibacterium sp. (SeqCode)


organism_name: Albidovulum sp.


organism_name: Bacteroidales bacterium


organism_name: Nitratifractor sp.


organism_name: Mesoaciditoga sp.


organism_name: Hydrogenovibrio sp.


organism_name: Marinosulfonomonas sp.


organism_name: Mariprofundaceae bacterium


organism_name: Aquificaceae bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Candidatus Zhuqueibacterota bacterium


organism_name: Acidobacteriota bacterium


organism_name: Acidiferrobacterales bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Thermodesulfobacteriales bacterium


organism_name: Caldifarciminota bacterium


organism_name: Paracoccaceae bacterium


organism_name: bacterium


organism_name: Nitrospirota bacterium


organism_name: Albidovulum sp.


organism_name: Parvularculaceae bacterium


organism_name: Phycisphaerales bacterium


organism_name: Cyclobacteriaceae bacterium


organism_name: Gemmatimonadota bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Ardenticatenaceae bacterium


organism_name: Anaerolineae bacterium


organism_name: Candidatus Zhuqueibacterota bacterium


organism_name: Hydrogenimonas sp.


organism_name: Candidatus Bipolaricaulota bacterium


organism_name: Aquificaceae bacterium


organism_name: Candidatus Aerophobota bacterium


organism_name: Saprospiraceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Caldifarciminota bacterium


organism_name: Thermosulfurimonas sp.


organism_name: Planctomycetaceae bacterium


organism_name: Bacteroidales bacterium


organism_name: Patescibacteria group bacterium


organism_name: Desulfurellaceae bacterium


organism_name: Oceanithermus sp.


organism_name: Mesoaciditoga sp.


organism_name: Nitratifractor sp.


organism_name: Caldisericales bacterium


organism_name: Phycisphaerae bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Sulfurovum sp.


organism_name: Deltaproteobacteria bacterium


organism_name: Helicobacteraceae bacterium


organism_name: Pseudomonadota bacterium


organism_name: Desulfobulbaceae bacterium


organism_name: Desulfobacteraceae bacterium


organism_name: Acidobacteriota bacterium


organism_name: Melioribacteraceae bacterium


organism_name: Draconibacterium sp.


organism_name: Spirochaetaceae bacterium


organism_name: Anaerolineae bacterium


organism_name: Bacteroidales bacterium


organism_name: Calditrichales bacterium


organism_name: Mariprofundaceae bacterium


organism_name: Nitratifractor sp.


organism_name: Aquificaceae bacterium


organism_name: Caldifarciminota bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Sulfurovum sp.


organism_name: Deltaproteobacteria bacterium


organism_name: Persephonella sp.


organism_name: Desulfurellaceae bacterium


organism_name: Caldilineaceae bacterium


organism_name: Lysobacterales bacterium


organism_name: Oceanithermus sp.


organism_name: Thermodesulfobacteriaceae bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Anaerolineales bacterium


organism_name: Hyphomicrobiales bacterium


organism_name: Saprospiraceae bacterium


organism_name: Desulfobulbaceae bacterium


organism_name: Planctomycetota bacterium


organism_name: Marinosulfonomonas sp.


organism_name: Thiotrichaceae bacterium


organism_name: Patescibacteria group bacterium


organism_name: Candidatus Omnitrophota bacterium


organism_name: bacterium


organism_name: Nitratiruptor sp.


organism_name: Desulfurellaceae bacterium


organism_name: Aquificota bacterium


organism_name: Hydrogenimonas sp.


organism_name: Oceanithermus sp.


organism_name: Campylobacterota bacterium


organism_name: Thermodesulfobacteriaceae bacterium


organism_name: Caldifarciminota bacterium


organism_name: Flavobacteriales bacterium


organism_name: Anaerolineales bacterium


organism_name: Melioribacteraceae bacterium


asm_submitter: National Center for Biotechnology Information

organism_name: Enterococcus faecium


asm_submitter: Vet-LIRN-CVM-FDA


infraspecific_name: strain=EF-After


organism_name: Enterococcus hirae


infraspecific_name: strain=EF-before


asm_submitter: Instituto de Biotecnologia

organism_name: Mycobacteroides abscessus subsp. bolletii


organism_name: Mycobacteroides abscessus subsp. massiliense


organism_name: Mycobacteroides abscessus subsp. abscessus


asm_submitter: West China Hospital, Sichuan University

organism_name: Klebsiella pneumoniae


asm_submitter: Ghent University

infraspecific_name: strain=JIP P11/91

organism_name: Flavobacterium columnare


infraspecific_name: strain=CDI-A


asm_submitter: University of New South Wales

organism_name: Mesorhizobium sp. NBSH29


organism_name: Mesorhizobium sp. INR15


asm_submitter: CHINESE ACADEMY OF SCIENCES

organism_name: Phototrophicus methaneseepsis


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


asm_submitter: FDA


asm_submitter: CDC

organism_name: Escherichia coli


organism_name: Salmonella enterica


annotation_name: Annotation submitted by AMR Research Center, National Institute of Infectious Diseases

organism_name: Aeromonas caviae


annotation_name: Annotation submitted by Department of Bacteriology, National Institute of Infectious Diseases


annotation_provider: Department of Bacteriology, National Institute of Infectious Diseases


annotation_name: Annotation submitted by Toho University

annotation_provider: Toho University

asm_submitter: Toho University

infraspecific_name: strain=TUM 19855

organism_name: Neisseria gonorrhoeae


asm_submitter: Brigham & Women's Hospital


asm_submitter: FDA/CFSAN

infraspecific_name: strain=ATCC 8459


organism_name: Enterococcus faecalis


asm_submitter: Center for Food Safety and Applied Nutrition


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: FDA Center for Food Safety and Applied Nutrition


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: Portland State University

organism_name: Thermaceae bacterium


organism_name: Hydrogenothermaceae bacterium


group: archaea

organism_name: Candidatus Woesearchaeota archaeon


organism_name: Oceanithermus sp.


organism_name: Thermoplasmata archaeon


organism_name: Candidatus Pacearchaeota archaeon


organism_name: Candidatus Aenigmatarchaeota archaeon


organism_name: Ferroglobus sp.


organism_name: Candidatus Hydrothermarchaeota archaeon


organism_name: Desulfurococcales archaeon


organism_name: Thermodiscus sp.


organism_name: Pyrodictiaceae archaeon


organism_name: Thermofilaceae archaeon


organism_name: Nitrososphaerota archaeon


organism_name: Aigarchaeota archaeon


organism_name: Candidatus Geoarchaeota archaeon


organism_name: Candidatus Geothermarchaeota archaeon


organism_name: Candidatus Pelearchaeum sp.


organism_name: Candidatus Bathyarchaeota archaeon


organism_name: Archaeoglobaceae archaeon


organism_name: Candidatus Woesearchaeota archaeon


organism_name: Candidatus Heimdallarchaeota archaeon


organism_name: Candidatus Aciduliprofundum sp.


organism_name: DHVE2 group archaeon


organism_name: Candidatus Aciduliprofundum boonei


organism_name: Candidatus Marinivulcanus frater


organism_name: Thermococcus sp.


organism_name: Desulfurococcales archaeon


organism_name: Candidatus Iainarchaeum sp.


organism_name: Microcaldota archaeon


organism_name: Nanobdellati archaeon


organism_name: Geoglobus sp.


organism_name: Thermoplasmata archaeon


organism_name: Thermodiscus sp.


organism_name: Thermodiscus eudorianus (SeqCode)


organism_name: Pyrodictiaceae archaeon


organism_name: Pyrolobus sp.


organism_name: Thermofilaceae archaeon


organism_name: Thermoproteota archaeon


organism_name: Candidatus Heimdallarchaeota archaeon


organism_name: Archaeoglobaceae archaeon


organism_name: DHVE2 group archaeon


organism_name: Candidatus Aenigmatarchaeota archaeon


organism_name: Candidatus Hydrothermarchaeota archaeon


organism_name: Ferroglobus sp.


organism_name: Thermococcus sp.


organism_name: Desulfurococcales archaeon


organism_name: Aeropyrum sp.


organism_name: Thermoproteaceae archaeon


organism_name: Candidatus Geothermarchaeota archaeon


organism_name: Geoglobus sp.


organism_name: Fervidicoccaceae archaeon


organism_name: Candidatus Pelearchaeum sp.


organism_name: Nanobdellati archaeon


organism_name: Candidatus Iainarchaeum sp.


organism_name: Thermodiscus sp.


organism_name: Pyrodictiaceae archaeon


organism_name: Candidatus Heimdallarchaeota archaeon


organism_name: Archaeoglobaceae archaeon


organism_name: Candidatus Woesearchaeota archaeon


organism_name: Microcaldota archaeon


organism_name: DHVE2 group archaeon


organism_name: Thermococcus sp.


organism_name: archaeon


organism_name: Hestiella sp. (SeqCode)


organism_name: Tiamatella incendiivivens (SeqCode)


organism_name: Tiamatella sp. (SeqCode)


organism_name: Thermoproteota archaeon


organism_name: Nitrososphaerota archaeon


organism_name: Candidatus Aenigmatarchaeota archaeon


organism_name: Candidatus Parvarchaeota archaeon


organism_name: Nanobdellati archaeon


organism_name: Thermoplasmata archaeon


organism_name: Candidatus Altarchaeota archaeon


organism_name: Candidatus Aciduliprofundum boonei


organism_name: Candidatus Aciduliprofundum sp.


organism_name: Methanothermococcus sp.


organism_name: Desulfurococcales archaeon


organism_name: Microcaldota archaeon


organism_name: Archaeoglobaceae archaeon


organism_name: Ferroglobus sp.


organism_name: Candidatus Hydrothermarchaeota archaeon


organism_name: Thermococcus sp.


organism_name: Aeropyrum sp.


organism_name: Thermodiscus sp.


organism_name: Candidatus Geothermarchaeota archaeon


organism_name: Candidatus Heimdallarchaeota archaeon


organism_name: Hestiella acidicharens (SeqCode)


organism_name: Thermoproteaceae archaeon


organism_name: Geoglobus sp.


organism_name: Escherichia coli


organism_name: Salmonella enterica


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Berta


organism_name: Campylobacter jejuni


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


asm_submitter: USDA, ARS, WRRC

organism_name: Campylobacter sputorum subsp. bovis


asm_submitter: Iowa state University

organism_name: Glutamicibacter sp. FBE19


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Livingstone


organism_name: Salmonella enterica subsp. enterica serovar Minnesota


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


organism_name: Escherichia coli


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Choleraesuis


organism_name: Salmonella enterica subsp. enterica serovar Panama


organism_name: Salmonella enterica subsp. enterica serovar London


organism_name: Campylobacter coli


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Escherichia coli


organism_name: Salmonella enterica


asm_submitter: Guangdong Academy of Sciences

assembly_level: Chromosome

organism_name: Qipengyuania soli


asm_submitter: USDA FSIS


excluded_from_refseq: unverified source organism; from large multi-isolate project


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Campylobacter jejuni


organism_name: Campylobacter upsaliensis


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


excluded_from_refseq: contaminated; from large multi-isolate project


organism_name: Salmonella enterica subsp. enterica serovar Derby


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Fluntern


organism_name: Listeria monocytogenes


asm_submitter: National Center for Biotechnology Information

infraspecific_name: strain=clinical isolate of L. monocytogenes


asm_submitter: Graduate School of Bioresources, Mie University

organism_name: Echinicola sp. 20G


asm_submitter: Shanghai Jiao Tong University

organism_name: Salmonella sp. SJTUF14178


organism_name: Salmonella sp. SJTUF14170


organism_name: Salmonella sp. SJTUF14154


organism_name: Salmonella sp. SJTUF14152


organism_name: Salmonella sp. SJTUF14146


organism_name: Salmonella sp. SJTUF14076


asm_submitter: University of Manitoba

organism_name: Escherichia coli K-12


asm_submitter: Sir Run Run Shaw Hospital, School of Medicine, Zhejiang University

organism_name: Enterobacter hormaechei


asm_submitter: Zhongkai University of Agriculture and Engineering

organism_name: Bacillus subtilis


asm_submitter: University of Bern

organism_name: Enterobacter hormaechei subsp. steigerwaltii


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


asm_submitter: CDC

organism_name: Salmonella enterica


asm_submitter: Universidade Federal do Rio de Janeiro

organism_name: Enterococcus faecium


organism_name: Campylobacter coli


asm_submitter: FDA/CFSAN


asm_submitter: Instituto Adolfo Lutz

organism_name: Acinetobacter baumannii


excluded_from_refseq: annotation fails completeness check


asm_submitter: UI

organism_name: Streptococcus macedonicus


organism_name: Escherichia coli


organism_name: Listeria monocytogenes


organism_name: Staphylococcus argenteus


organism_name: Staphylococcus aureus


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


organism_name: Shigella flexneri


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Staphylococcus pseudintermedius


infraspecific_name: strain=clinical isolate


infraspecific_name: strain=screening isolate


infraspecific_name: strain=Staphylococcus aureus


asm_submitter: NEOSTAR_Indo-UK Project on AMR

infraspecific_name: strain=PMS 14

organism_name: Pasteurella multocida


asm_submitter: China CDC

organism_name: Tuanshanicoccus lijuaniae


asm_submitter: Icahn School of Medicine at Mount Sinai

organism_name: Bacteroides faecis


infraspecific_name: strain=PMS 19


infraspecific_name: strain=PMS 2


organism_name: Megasphaera sp. D52t1_170925_H4


organism_name: Bifidobacterium longum


organism_name: Bacteroides thetaiotaomicron


organism_name: Phocaeicola plebeius


organism_name: Phocaeicola massiliensis


organism_name: Lactobacillus gasseri


organism_name: Streptococcus parasanguinis


organism_name: Bacteroides caccae


organism_name: Odoribacter splanchnicus


organism_name: Faecalispora jeddahensis


organism_name: Bacteroides intestinalis


organism_name: Collinsella aerofaciens


organism_name: Enterococcus faecium


organism_name: Streptococcus infantis


organism_name: Bacteroides clarus


organism_name: Veillonella dispar


organism_name: Streptococcus salivarius


organism_name: Enterococcus faecalis


organism_name: Faecalitalea cylindroides


organism_name: Bacillus paralicheniformis


organism_name: Bacteroides uniformis


organism_name: Bacteroides ovatus


organism_name: Parabacteroides distasonis


organism_name: Escherichia coli


organism_name: Phocaeicola massiliensis


organism_name: Streptococcus anginosus


organism_name: Allocoprococcus comes


organism_name: Phocaeicola vulgatus


organism_name: Eggerthella lenta


organism_name: Collinsella aerofaciens


organism_name: Lactiplantibacillus plantarum


organism_name: Flavonifractor plautii


organism_name: Bacteroides thetaiotaomicron


organism_name: Clostridium celatum


organism_name: Bacteroides xylanisolvens


organism_name: Bacteroides fragilis


organism_name: Bacteroides salyersiae


organism_name: Heyndrickxia coagulans


organism_name: Bacteroides nordii


organism_name: Alistipes shahii


organism_name: [Clostridium] symbiosum


organism_name: Holdemanella biformis


organism_name: Escherichia coli


organism_name: Bacteroides ovatus


organism_name: Enterocloster bolteae


organism_name: Bifidobacterium longum


organism_name: Parabacteroides distasonis


organism_name: Parabacteroides merdae


organism_name: Flavonifractor plautii


organism_name: Bifidobacterium adolescentis


organism_name: Bifidobacterium breve


organism_name: Bacteroides uniformis


organism_name: Odoribacter laneus


organism_name: Anaerotruncus colihominis


organism_name: Weissella confusa


organism_name: Enterocloster clostridioformis


organism_name: Phocaeicola dorei


organism_name: Phocaeicola vulgatus


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Enterobacter roggenkampii


organism_name: Bacteroides thetaiotaomicron


organism_name: Klebsiella pneumoniae


organism_name: Alistipes finegoldii


organism_name: Bacteroides ovatus


organism_name: Escherichia coli


organism_name: Clostridium perfringens


organism_name: Collinsella aerofaciens


organism_name: Parabacteroides distasonis


organism_name: Allocoprococcus comes


organism_name: Enterocloster citroniae


organism_name: Parabacteroides johnsonii


organism_name: Bacteroides fragilis


organism_name: Streptococcus agalactiae


organism_name: Staphylococcus warneri


organism_name: Lactococcus garvieae


organism_name: Ligilactobacillus salivarius


organism_name: Hoylesella timonensis


organism_name: Bifidobacterium adolescentis


organism_name: Peptostreptococcus anaerobius


organism_name: Bacteroides cellulosilyticus


organism_name: Bacteroides nordii


organism_name: Lacticaseibacillus rhamnosus


organism_name: Bacteroides ovatus


organism_name: Phocaeicola dorei


organism_name: Serratia marcescens


organism_name: Dorea longicatena


organism_name: Bifidobacterium catenulatum


organism_name: Streptococcus oralis


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: [Clostridium] symbiosum


organism_name: Roseburia faecis


organism_name: Bifidobacterium bifidum


organism_name: Lactiplantibacillus plantarum


organism_name: Enterococcus faecium


organism_name: Collinsella aerofaciens


organism_name: Turicibacter sanguinis


organism_name: Eggerthella lenta


organism_name: Bacteroides caccae


organism_name: Allocoprococcus comes


asm_submitter: Kyushu University

organism_name: Cupriavidus sp. IK-TO18


organism_name: Odoribacter splanchnicus


organism_name: Blautia wexlerae


organism_name: Phocaeicola massiliensis


organism_name: Citrobacter farmeri


organism_name: Alistipes putredinis


organism_name: Barnesiella intestinihominis


organism_name: Anaerococcus vaginalis


organism_name: Parabacteroides distasonis


organism_name: Clostridium paraputrificum


organism_name: Bacteroides congonensis


organism_name: Bacteroides uniformis


organism_name: Escherichia coli


organism_name: Bacteroides ovatus


organism_name: Phocaeicola vulgatus


organism_name: Bifidobacterium bifidum


organism_name: Streptococcus australis


organism_name: Blautia massiliensis (ex Durand et al. 2017)


organism_name: Bifidobacterium adolescentis


organism_name: Enterococcus faecium


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Schaalia turicensis


organism_name: Collinsella aerofaciens


organism_name: Veillonella parvula


organism_name: Streptococcus salivarius


organism_name: Roseburia faecis


organism_name: Enterococcus faecalis


organism_name: Bifidobacterium longum


organism_name: Harryflintia acetispora


organism_name: Escherichia coli


organism_name: Bacteroides cellulosilyticus


organism_name: Flavonifractor plautii


organism_name: Lactobacillus gasseri


organism_name: Bacteroides uniformis


organism_name: Proteus mirabilis


organism_name: Turicibacter sanguinis


organism_name: [Clostridium] hylemonae


organism_name: [Clostridium] symbiosum


organism_name: Allocoprococcus comes


organism_name: Lactobacillus paragasseri


organism_name: Bacillus paralicheniformis


organism_name: Klebsiella grimontii


organism_name: Phocaeicola dorei


organism_name: Parabacteroides goldsteinii


organism_name: Ruminococcus bromii


organism_name: Anaerotruncus colihominis


organism_name: Escherichia coli


organism_name: Merdimmobilis hominis


organism_name: [Clostridium] innocuum


organism_name: Streptococcus parasanguinis


organism_name: Phocaeicola vulgatus


organism_name: Bacteroides fragilis


organism_name: Agathobacter rectalis


organism_name: Bifidobacterium longum


organism_name: Sellimonas intestinalis


organism_name: Bacteroides uniformis


organism_name: Blautia wexlerae


organism_name: Enterococcus mundtii


organism_name: Streptococcus salivarius


organism_name: Enterococcus faecium


organism_name: Faecalicoccus pleomorphus


organism_name: Klebsiella michiganensis


organism_name: Phocaeicola dorei


organism_name: Escherichia coli


organism_name: Enterococcus casseliflavus


organism_name: Alistipes onderdonkii


organism_name: Bacteroides cellulosilyticus


organism_name: Clostridium paraputrificum


organism_name: Lacticaseibacillus paracasei


organism_name: Lactococcus lactis


organism_name: Bifidobacterium longum


organism_name: Anaerotruncus rubiinfantis


organism_name: Bacteroides thetaiotaomicron


organism_name: Leuconostoc lactis


organism_name: Agathobacter rectalis


organism_name: Staphylococcus epidermidis


organism_name: Bacteroides fragilis


organism_name: Flavonifractor plautii


organism_name: Eggerthella lenta


organism_name: Barnesiella intestinihominis


organism_name: Bacteroides eggerthii


organism_name: Bifidobacterium bifidum


organism_name: Enterocloster bolteae


organism_name: Bacteroides uniformis


organism_name: Streptococcus salivarius


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Ruminococcus sp. D54t1_190329_F1


organism_name: Enterococcus mundtii


organism_name: Odoribacter splanchnicus


organism_name: Weissella cibaria


organism_name: Parabacteroides goldsteinii


organism_name: Bacteroides nordii


organism_name: Weissella confusa


organism_name: Streptococcus parasanguinis


organism_name: Bacteroides xylanisolvens


organism_name: Klebsiella oxytoca


organism_name: Bacteroides ovatus


organism_name: Bacteroides caccae


organism_name: Enterococcus faecium


organism_name: Pediococcus acidilactici


organism_name: Parabacteroides merdae


organism_name: Bacteroides stercoris


organism_name: Phocaeicola vulgatus


organism_name: Bacteroides thetaiotaomicron


organism_name: Paraclostridium bifermentans


organism_name: Faecalitalea cylindroides


organism_name: Bacteroides finegoldii


organism_name: Collinsella aerofaciens


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Parabacteroides distasonis


organism_name: Ligilactobacillus salivarius


organism_name: Escherichia coli


organism_name: Eggerthella lenta


organism_name: Anaerofustis stercorihominis


organism_name: Bacteroides uniformis


organism_name: Allocoprococcus comes


organism_name: Klebsiella pneumoniae


organism_name: Streptococcus parasanguinis


organism_name: Weissella cibaria


organism_name: Bacillus licheniformis


organism_name: Lactococcus lactis


organism_name: Streptococcus gordonii


organism_name: Bacteroides cellulosilyticus


organism_name: Bifidobacterium animalis


organism_name: Limosilactobacillus reuteri


organism_name: Enterococcus faecium


organism_name: Agathobaculum butyriciproducens


organism_name: Lactobacillus paragasseri


organism_name: Streptococcus anginosus


organism_name: Lacticaseibacillus paracasei


organism_name: Phocaeicola vulgatus


organism_name: Bifidobacterium adolescentis


organism_name: Blautia wexlerae


organism_name: Dorea longicatena


organism_name: Streptococcus salivarius


organism_name: Fusobacterium sp. 1001295B_180824_G3


organism_name: Faecalicatena contorta


organism_name: Bacteroides uniformis


organism_name: Parabacteroides distasonis


organism_name: Streptococcus oralis


organism_name: Bacteroides thetaiotaomicron


organism_name: Parabacteroides merdae


organism_name: Bacteroides cellulosilyticus


organism_name: Escherichia coli


organism_name: Flavonifractor plautii


organism_name: Bacteroides caccae


organism_name: Actinomyces urogenitalis


organism_name: Odoribacter splanchnicus


organism_name: Mediterraneibacter gnavus


organism_name: Phocaeicola vulgatus


organism_name: Lachnospira eligens


organism_name: Bacteroides fragilis


organism_name: Dorea longicatena


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Collinsella aerofaciens


organism_name: Clostridium perfringens


organism_name: Intestinimonas butyriciproducens


organism_name: Bacteroides xylanisolvens


organism_name: Leuconostoc lactis


organism_name: Bifidobacterium longum


organism_name: Paraclostridium sordellii


organism_name: Clostridium cuniculi


organism_name: Agathobacter rectalis


organism_name: Bacteroides finegoldii


organism_name: Allocoprococcus comes


organism_name: Streptococcus australis


organism_name: Hungatella hathewayi


organism_name: Alistipes communis


organism_name: Bacteroides uniformis


organism_name: Bacteroides fragilis


organism_name: Morganella morganii


organism_name: [Clostridium] symbiosum


organism_name: Escherichia coli


organism_name: Bifidobacterium adolescentis


organism_name: Flavonifractor plautii


organism_name: Odoribacter splanchnicus


organism_name: Clostridium perfringens


organism_name: Alistipes sp. D31t1_170403_E11


organism_name: Bifidobacterium longum


organism_name: Bacteroides thetaiotaomicron


organism_name: Parabacteroides merdae


organism_name: Alistipes putredinis


organism_name: Parabacteroides distasonis


organism_name: Phocaeicola dorei


organism_name: Collinsella aerofaciens


organism_name: Citrobacter farmeri


organism_name: Bacteroides ovatus


organism_name: Allocoprococcus comes


organism_name: Anaerotruncus colihominis


organism_name: Phocaeicola vulgatus


organism_name: Enterococcus faecium


organism_name: Ruminococcus sp. D55t1_190419_H1


organism_name: Bacteroides intestinalis


organism_name: Flavonifractor plautii


organism_name: Bacteroides cellulosilyticus


organism_name: Eggerthella lenta


organism_name: Enterococcus hirae


organism_name: Odoribacter splanchnicus


organism_name: Klebsiella oxytoca


organism_name: Blautia wexlerae


organism_name: Agathobacter rectalis


organism_name: Faecalispora jeddahensis


organism_name: Escherichia coli


organism_name: Bacteroides faecis


organism_name: Bacteroides ovatus


organism_name: Anaerostipes hadrus


organism_name: Mediterraneibacter gnavus


organism_name: Roseburia intestinalis


organism_name: Enterococcus avium


organism_name: Bacteroides uniformis


organism_name: Alistipes senegalensis


organism_name: Collinsella sp. D33t1_170424_A12


organism_name: Bifidobacterium breve


organism_name: Veillonella parvula


organism_name: Enterococcus faecium


organism_name: Parabacteroides merdae


organism_name: Bifidobacterium bifidum


organism_name: Dorea longicatena


organism_name: Collinsella aerofaciens


organism_name: Phocaeicola vulgatus


organism_name: Bifidobacterium longum


organism_name: Bifidobacterium dentium


organism_name: Bacteroides eggerthii


organism_name: Barnesiella intestinihominis


organism_name: Eggerthella lenta


organism_name: Pediococcus acidilactici


organism_name: Parabacteroides johnsonii


organism_name: Clostridium sp. D46t1_190503_E9


organism_name: Streptococcus constellatus


organism_name: [Eubacterium] siraeum


organism_name: Escherichia coli


organism_name: Streptococcus salivarius


organism_name: Turicibacter sanguinis


organism_name: Streptococcus parasanguinis


organism_name: Alistipes timonensis


organism_name: Bacteroides thetaiotaomicron


organism_name: Clostridium perfringens


organism_name: Bacteroides uniformis


organism_name: Enterococcus gallinarum


organism_name: Lacticaseibacillus paracasei


organism_name: Bifidobacterium adolescentis


organism_name: Parabacteroides distasonis


organism_name: Fusobacterium varium


organism_name: Phocaeicola vulgatus


organism_name: Enterococcus mundtii


organism_name: Bacteroides finegoldii


organism_name: Bacteroides ovatus


organism_name: Roseburia intestinalis


organism_name: Bacteroides clarus


organism_name: Hungatella hathewayi


organism_name: Clostridium sp. D43t1_170807_H7


organism_name: Bacteroides eggerthii


organism_name: Escherichia coli


organism_name: Streptococcus agalactiae


organism_name: Enterococcus hirae


organism_name: Enterocloster bolteae


organism_name: Streptococcus parasanguinis


organism_name: Allocoprococcus comes


organism_name: Bacteroides intestinalis


organism_name: Streptococcus mutans


organism_name: Bacteroides xylanisolvens


organism_name: Streptococcus salivarius


organism_name: Bifidobacterium longum


organism_name: Roseburia faecis


organism_name: Parolsenella catena


organism_name: Bacteroides fragilis


organism_name: Barnesiella intestinihominis


organism_name: Lactiplantibacillus plantarum


organism_name: Dorea longicatena


organism_name: Peptoniphilus harei


organism_name: Blautia wexlerae


organism_name: Eggerthella lenta


organism_name: Bacteroides thetaiotaomicron


organism_name: Escherichia coli


organism_name: Enterococcus faecalis


organism_name: Parabacteroides distasonis


organism_name: Streptococcus sp. 1001175B_160314_H6


organism_name: Clostridium paraputrificum


organism_name: Enterococcus gallinarum


organism_name: Phocaeicola vulgatus


organism_name: Parabacteroides merdae


organism_name: Collinsella bouchesdurhonensis


organism_name: Klebsiella pneumoniae


organism_name: Alistipes shahii


organism_name: Bacteroides caccae


organism_name: Proteus penneri


organism_name: Bacteroides ovatus


organism_name: Bacteroides salyersiae


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Collinsella aerofaciens


organism_name: Clostridium tyrobutyricum


organism_name: Pediococcus acidilactici


organism_name: Bacteroides finegoldii


organism_name: Bacteroides uniformis


organism_name: Enterococcus faecalis


organism_name: Ligilactobacillus ruminis


organism_name: Parabacteroides goldsteinii


organism_name: Eubacterium maltosivorans


organism_name: Ligilactobacillus salivarius


organism_name: Escherichia coli


organism_name: Eggerthella lenta


organism_name: Bacteroides cellulosilyticus


organism_name: Bacteroides stercoris


organism_name: Bacteroides caccae


organism_name: Phocaeicola vulgatus


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Mediterraneibacter gnavus


organism_name: Bacteroides nordii


organism_name: Pediococcus acidilactici


organism_name: Phocaeicola massiliensis


organism_name: Paraclostridium bifermentans


organism_name: Collinsella aerofaciens


organism_name: Agathobacter rectalis


organism_name: Bacteroides ovatus


organism_name: Bifidobacterium adolescentis


organism_name: Bifidobacterium longum


organism_name: Fusicatenibacter saccharivorans


organism_name: Phocaeicola dorei


organism_name: Escherichia coli


organism_name: Bacteroides uniformis


organism_name: Streptococcus parasanguinis


organism_name: Enterococcus dispar


organism_name: Lacticaseibacillus rhamnosus


organism_name: Clostridium butyricum


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Enterocloster bolteae


organism_name: Bacillus licheniformis


organism_name: Bacillus paralicheniformis


organism_name: Alistipes finegoldii


organism_name: Bacteroides faecis


organism_name: Bacteroides salyersiae


organism_name: Bacteroides stercoris


organism_name: Roseburia faecis


organism_name: Bifidobacterium adolescentis


organism_name: Clostridium sp. D43t1_170807_D5


organism_name: Clostridium paraputrificum


organism_name: Bacteroides finegoldii


organism_name: Parabacteroides distasonis


organism_name: Lactiplantibacillus plantarum


organism_name: Anaerotruncus colihominis


organism_name: Enterococcus faecalis


organism_name: Turicibacter sanguinis


organism_name: Massiliimalia timonensis


organism_name: Ruminococcus sp. 1001095IJ_161003_G2


organism_name: Lacticaseibacillus rhamnosus


organism_name: Enterocloster bolteae


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Phocaeicola massiliensis


organism_name: Alistipes shahii


organism_name: Parabacteroides merdae


organism_name: Bacteroides ovatus


organism_name: Weissella cibaria


organism_name: Allocoprococcus comes


organism_name: Bacteroides uniformis


organism_name: Bifidobacterium adolescentis


organism_name: [Clostridium] symbiosum


organism_name: Dorea longicatena


organism_name: Bifidobacterium longum


organism_name: Citrobacter farmeri


organism_name: Eggerthella lenta


organism_name: Phocaeicola vulgatus


organism_name: Collinsella aerofaciens


organism_name: Lacticaseibacillus paracasei


organism_name: Phocaeicola dorei


organism_name: Bacteroides sp. D55t1_190419_B8


organism_name: Flavonifractor plautii


organism_name: Bacteroides fragilis


organism_name: Ruminococcus sp. D40t1_170626_H2


organism_name: Agathobacter rectalis


organism_name: Barnesiella intestinihominis


organism_name: Klebsiella oxytoca


organism_name: [Eubacterium] siraeum


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Escherichia coli


organism_name: Streptococcus parasanguinis


organism_name: Bacteroides uniformis


organism_name: Eubacterium ventriosum


organism_name: Mediterraneibacter gnavus


organism_name: Streptococcus constellatus


organism_name: Streptococcus salivarius


organism_name: Enterococcus durans


organism_name: Lachnospira eligens


organism_name: Blautia massiliensis (ex Durand et al. 2017)


organism_name: Coprobacter fastidiosus


organism_name: Bifidobacterium dentium


organism_name: Clostridium paraputrificum


organism_name: Phocaeicola vulgatus


organism_name: Bifidobacterium adolescentis


organism_name: Bacteroides congonensis


organism_name: Bacteroides xylanisolvens


organism_name: Bacteroides ovatus


organism_name: Parabacteroides distasonis


organism_name: Alistipes onderdonkii


organism_name: Escherichia coli


organism_name: Roseburia faecis


organism_name: Weissella cibaria


organism_name: Bacteroides cellulosilyticus


organism_name: Bacillus licheniformis


organism_name: Alistipes shahii


organism_name: [Eubacterium] siraeum


organism_name: Streptococcus australis


organism_name: Bacteroides uniformis


organism_name: Clostridium paraputrificum


organism_name: Lactiplantibacillus plantarum


organism_name: Streptococcus salivarius


organism_name: Longibaculum muris


organism_name: Intestinimonas butyriciproducens


organism_name: Bacteroides nordii


organism_name: Blautia obeum


organism_name: Agathobacter rectalis


organism_name: Bacteroides clarus


organism_name: Ligilactobacillus salivarius


organism_name: Alistipes onderdonkii


organism_name: Bifidobacterium adolescentis


organism_name: Klebsiella pneumoniae


organism_name: Collinsella aerofaciens


organism_name: Allocoprococcus comes


organism_name: Enterococcus durans


organism_name: Streptococcus rubneri


organism_name: Bacteroides uniformis


organism_name: Thomasclavelia ramosa


organism_name: Bacteroides stercoris


organism_name: [Clostridium] symbiosum


organism_name: Lactobacillus paragasseri


organism_name: Enterococcus faecium


organism_name: Clostridium tyrobutyricum


organism_name: Bacteroides caccae


organism_name: Bacteroides thetaiotaomicron


organism_name: Bacteroides fragilis


organism_name: Bifidobacterium longum


organism_name: Odoribacter splanchnicus


organism_name: [Ruminococcus] lactaris


organism_name: Clostridium tertium


organism_name: Proteus mirabilis


organism_name: Bacteroides faecis


organism_name: Lactobacillus johnsonii


organism_name: Streptococcus parasanguinis


organism_name: Collinsella aerofaciens


organism_name: Bacteroides eggerthii


organism_name: Mediterraneibacter glycyrrhizinilyticus


organism_name: Blautia massiliensis (ex Durand et al. 2017)


organism_name: Escherichia coli


organism_name: Lacticaseibacillus paracasei


organism_name: Phocaeicola dorei


organism_name: Streptococcus australis


organism_name: Phocaeicola massiliensis


organism_name: Thomasclavelia ramosa


organism_name: Flavonifractor plautii


organism_name: [Eubacterium] siraeum


organism_name: Phocaeicola vulgatus


organism_name: Bacteroides stercoris


organism_name: Alistipes onderdonkii


organism_name: Eggerthella lenta


organism_name: Bacteroides intestinalis


organism_name: Bacteroides uniformis


organism_name: Clostridium paraputrificum


organism_name: Collinsella aerofaciens


organism_name: Lactiplantibacillus plantarum


organism_name: Streptococcus oralis


organism_name: Mediterraneibacter gnavus


organism_name: Blautia wexlerae


organism_name: Escherichia coli


organism_name: Clostridium perfringens


organism_name: Bacteroides ovatus


asm_submitter: National Center for Biotechnology Information

organism_name: Staphylococcus aureus


organism_name: Listeria monocytogenes


organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica


asm_submitter: Health Protection Agency


asm_submitter: FDA


asm_submitter: Pharmacology and Toxicology Laboratory

infraspecific_name: strain=NCTC 74

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium

relation_to_type_material: assembly from heterotypic synonym type material


asm_submitter: shandong university

organism_name: Microbacterium schleiferi


asm_submitter: Chengdu Medical College

organism_name: Companilactobacillus futsaii subsp. chongqingensis


organism_name: Escherichia albertii


organism_name: Staphylococcus aureus ADL-330


organism_name: Staphylococcus aureus ADL-227


organism_name: Staphylococcus aureus ADL-331


organism_name: Staphylococcus aureus ADL-210


organism_name: Staphylococcus aureus ADL-121


organism_name: Staphylococcus aureus ADL-206


asm_submitter: Government of Canada

organism_name: Escherichia coli


organism_name: Providencia rettgeri


organism_name: Escherichia coli O169:H41


organism_name: Escherichia coli O9:H10


organism_name: Escherichia coli O20:H12


organism_name: Escherichia coli O39:H21


organism_name: Escherichia coli O100:H21


organism_name: Escherichia coli O157:H16


organism_name: Escherichia coli O152:H23


organism_name: Escherichia coli O112ab:H8


organism_name: Acinetobacter baumannii


organism_name: Klebsiella terrigena


asm_submitter: Swedish Defence Research Agency (FOI)

organism_name: Francisella tularensis


infraspecific_name: strain=MSSA

organism_name: Staphylococcus aureus


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


asm_submitter: UTM

organism_name: Priestia megaterium


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Anatum


asm_submitter: FDA/CFSAN

organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Staphylococcus pseudintermedius


organism_name: Salmonella enterica subsp. enterica serovar Lubbock


infraspecific_name: strain=Abscess


asm_submitter: ROBERT KOCH INSTITUT


infraspecific_name: strain=Lesion


asm_submitter: Center for Food Safety and Applied Nutrition

organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Campylobacter jejuni


asm_submitter: CDC


asm_submitter: Vet-LIRN-CVM-FDA


asm_submitter: Brigham & Women's Hospital


asm_submitter: Estacion Experimental del Zaidin

organism_name: Novosphingobium sp. HR1a


asm_submitter: University of Bath

organism_name: Staphylococcus lloydii


organism_name: Staphylococcus kloosii


organism_name: Staphylococcus durrellii


asm_submitter: University of KwaZulu-Natal (UKZN), South Africa

organism_name: Klebsiella pneumoniae


asm_submitter: Chinese Center for Disease Control and Prevention

organism_name: Streptococcus sp. HF-1907


organism_name: Bacteroides sp. HF-5613


asm_submitter: Tomsk State University

organism_name: Desulfallas sp. Bu1-1


organism_name: Streptococcus sp. HF-100


organism_name: Streptococcus sp. HF-2466


asm_submitter: Monash University

organism_name: Campylobacter volucris


asm_submitter: Lycoming College

organism_name: Flavobacterium sp. ALJ2


asm_submitter: Research Center of Biotechnology RAS

infraspecific_name: strain=M17 DMB

organism_name: Alkalibacter mobilis


asm_submitter: Central Texas Veterans Health Care System


asm_submitter: Geneva College

organism_name: Vibrio sp. VB16


asm_submitter: Universidad Nacional Autonoma de Mexico

organism_name: Weissella confusa


asm_submitter: Icahn School of Medicine at Mount Sinai

organism_name: Lacticaseibacillus paracasei


asm_submitter: Griffith University

infraspecific_name: strain=KAO

organism_name: Halomonas sp. KAO


asm_submitter: Kyonggi university

organism_name: Marinibium conchae


asm_submitter: Institute of Sciences of Food Production (ISPA)

organism_name: Aliarcobacter butzleri


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: Center for Food Safety and Applied Nutrition

organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


asm_submitter: FDA/CFSAN

organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Escherichia coli


organism_name: Staphylococcus aureus


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Panama


asm_submitter: National Center for Biotechnology Information


asm_submitter: CDC


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


infraspecific_name: strain=microbial

isolate: Human


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Campylobacter coli


asm_submitter: USDA FSIS


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Staphylococcus pseudintermedius


infraspecific_name: strain=CVM N28724PS


infraspecific_name: strain=CVM N28240PS


infraspecific_name: strain=CVM N29141PS


infraspecific_name: strain=CVM N28722PS


infraspecific_name: strain=CVM N28725PS


infraspecific_name: strain=CVM N28980PS


infraspecific_name: strain=CVM N29057PS


infraspecific_name: strain=CVM N55829PS


infraspecific_name: strain=CVM N26440PS


infraspecific_name: strain=CVM N28977PS


infraspecific_name: strain=CVM N28976PS


infraspecific_name: strain=CVM N28973PS


infraspecific_name: strain=CVM N28971PS


infraspecific_name: strain=CVM N28958PS


infraspecific_name: strain=CVM N28952PS


infraspecific_name: strain=CVM N28970PS


infraspecific_name: strain=CVM N28951PS


infraspecific_name: strain=CVM N28967PS


infraspecific_name: strain=CVM N28950PS


infraspecific_name: strain=CVM N28949PS


infraspecific_name: strain=CVM N28859PS


infraspecific_name: strain=CVM N28802PS


infraspecific_name: strain=CVM N28902PS


asm_submitter: University of Florence

organism_name: Klebsiella sp. BDA134-6


infraspecific_name: strain=CVM N28844PS


infraspecific_name: strain=CVM N28210PS


infraspecific_name: strain=CVM N28662PS


infraspecific_name: strain=CVM N28184PS


infraspecific_name: strain=CVM N28726PS


infraspecific_name: strain=CVM N28237PS


infraspecific_name: strain=CVM N28017PS


infraspecific_name: strain=CVM N26868PS


infraspecific_name: strain=CVM N28183PS


asm_submitter: Chinese Academy of Sciences

organism_name: Streptomyces albidoflavus


infraspecific_name: strain=CVM N27230PS


infraspecific_name: strain=CVM N27231PS


infraspecific_name: strain=CVM N26605PS


infraspecific_name: strain=CVM N26558PS


infraspecific_name: strain=CVM N26443PS


infraspecific_name: strain=CVM N26444PS


infraspecific_name: strain=CVM N26552PS


infraspecific_name: strain=CVM N26553PS


infraspecific_name: strain=CVM N26441PS


infraspecific_name: strain=CVM N26439PS


infraspecific_name: strain=CVM N26410PS


infraspecific_name: strain=CVM N26438PS


infraspecific_name: strain=CVM N26043PS


infraspecific_name: strain=CVM N26071PS


infraspecific_name: strain=CVM N26041PS


infraspecific_name: strain=CVM N26040PS


infraspecific_name: strain=CVM N26037PS


infraspecific_name: strain=CVM N26034PS


infraspecific_name: strain=CVM N26032PS


infraspecific_name: strain=CVM N26035PS


infraspecific_name: strain=CVM N26027PS


infraspecific_name: strain=CVM N26036PS


infraspecific_name: strain=CVM N26031PS


infraspecific_name: strain=CVM N29103PS


infraspecific_name: strain=CVM N26030PS


infraspecific_name: strain=CVM N26025PS


infraspecific_name: strain=CVM N26029PS


infraspecific_name: strain=CVM N28979PS


infraspecific_name: strain=CVM N26024PS


infraspecific_name: strain=CVM N26026PS


infraspecific_name: strain=CVM N26442PS


infraspecific_name: strain=CVM N25953PS


infraspecific_name: strain=CVM N26002PS


infraspecific_name: strain=CVM N26014PS


infraspecific_name: strain=CVM N26007PS


infraspecific_name: strain=CVM N25991PS


infraspecific_name: strain=CVM N25993PS


infraspecific_name: strain=CVM N25854PS


infraspecific_name: strain=CVM N26015PS


infraspecific_name: strain=CVM N25988PS


infraspecific_name: strain=CVM N25853PS


infraspecific_name: strain=CVM N26021PS


infraspecific_name: strain=CVM N25691PS


infraspecific_name: strain=CVM N25720PS


asm_submitter: Leibniz Institute DSMZ

infraspecific_name: strain=DSM 110634

organism_name: Photobacterium damselae


asm_submitter: Brigham & Women's Hospital


asm_submitter: Zhongkai University of Agriculture and Engineering

organism_name: Bacillus subtilis


asm_submitter: Macquarie University

organism_name: Acinetobacter johnsonii


organism_name: Acinetobacter sp. TTH0-4


organism_name: Acinetobacter nosocomialis


organism_name: Acinetobacter lwoffii


infraspecific_name: strain=Staphylococcus aureus


asm_submitter: Agroscope

infraspecific_name: strain=FAM 24207

organism_name: Pediococcus pentosaceus


infraspecific_name: strain=FAM 23908


infraspecific_name: strain=FAM 20746


infraspecific_name: strain=FAM 22491


infraspecific_name: strain=FAM 20709


infraspecific_name: strain=FAM 20675


infraspecific_name: strain=FAM 19164


infraspecific_name: strain=FAM 18528


infraspecific_name: strain=FAM 18523


infraspecific_name: strain=LMG 13560


infraspecific_name: strain=FAM 18048


infraspecific_name: strain=LMG 13372


infraspecific_name: strain=LMG 9445


infraspecific_name: strain=LMG 11487


infraspecific_name: strain=DSM 28628


infraspecific_name: strain=DSM 20333


infraspecific_name: strain=DSM 46292


infraspecific_name: strain=DSM 20281


infraspecific_name: strain=DSM 20280


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


infraspecific_name: strain=FAM 24213


infraspecific_name: strain=FAM 24212


infraspecific_name: strain=FAM 24211


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Staphylococcus aureus


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica


organism_name: Campylobacter jejuni


organism_name: Escherichia coli


organism_name: Campylobacter coli


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


asm_submitter: USDA


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: Universidad Autonoma de Nuevo Leon

organism_name: Bacillus albus


organism_name: Bacillus toyonensis biovar Thuringiensis


asm_submitter: Research Institute of Forest Ecology Environment and Protection

organism_name: Pseudomonas sp. LY10J


asm_submitter: FDA


organism_name: Salmonella enterica subsp. enterica serovar Oranienburg


organism_name: Salmonella enterica subsp. enterica serovar Typhi


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul


organism_name: Salmonella enterica subsp. enterica serovar Paratyphi A


organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: Health Protection Agency


asm_submitter: CDC


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


asm_submitter: USDA FSIS


asm_submitter: FDA/CFSAN


organism_name: Shigella sonnei


asm_submitter: Georg-August-University Goettingen

organism_name: Roseateles sp. DAIF2


organism_name: Shigella flexneri


asm_submitter: INRAE

organism_name: Brucella pinnipedialis


asm_submitter: Universite Claude Bernard - Lyon 1

organism_name: Bradyrhizobium genosp. L


organism_name: Bradyrhizobium commune


asm_submitter: Agriculture and Agri-Food Canada

organism_name: Escherichia coli


asm_submitter: University of Bologna

organism_name: Pseudomonas aeruginosa


organism_name: Klebsiella pneumoniae


asm_submitter: Cornell University

organism_name: Acinetobacter baretiae


organism_name: Acinetobacter rathckeae


organism_name: Acinetobacter pollinis


asm_submitter: Institute of Biomedicine of Seville (IBiS)

organism_name: Acinetobacter baumannii


annotation_name: Annotation submitted by St Petersburg Pasteur Institute

annotation_provider: St Petersburg Pasteur Institute

asm_submitter: St Petersburg Pasteur Institute, St Petersburg, Russia

organism_name: Mycobacterium tuberculosis


organism_name: Campylobacter coli


organism_name: Enterococcus faecium


asm_submitter: National Center for Biotechnology Information


organism_name: Salmonella enterica


asm_submitter: US Food and Drug Administration


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Staphylococcus pseudintermedius


organism_name: Listeria monocytogenes


infraspecific_name: strain=EFM


asm_submitter: Shandong University at Weihai

organism_name: Pseudomonas sp. N040


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Hvittingfoss


asm_submitter: CDC


asm_submitter: Public Health Agency of Canada

organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


isolate: Enterococcus faecium


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Javiana


asm_submitter: Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences

organism_name: Priestia megaterium


asm_submitter: Research Institute for Genetics and Selection of Industrial Microorganisms(Genetika)

organism_name: Rhodococcus erythropolis


asm_submitter: Erciyes University

organism_name: Pseudomonas brenneri


asm_submitter: Seoul Metropolitan Government Research Institute of Public Health and Environment


asm_submitter: Technical University of Munich

organism_name: Clostridium beijerinckii


asm_submitter: Hospital Ramon y Cajal

organism_name: Klebsiella pneumoniae


organism_name: Klebsiella quasipneumoniae


organism_name: Klebsiella quasivariicola


asm_submitter: BioPS Co., Ltd.

organism_name: Rahnella laticis


organism_name: Rahnella victoriana


organism_name: Rahnella sp. LAC-M12


asm_submitter: Kyonggi university

organism_name: Roseobacter sp. MH60115


asm_submitter: Lebanese American University


asm_submitter: Huazhong Agricultural University

excluded_from_refseq: partial

genome_rep: Partial

organism_name: Latilactobacillus sakei


asm_submitter: Jeju National University

organism_name: Salinimonas marina


asm_submitter: Sree Balaji Dental College & Hospital

organism_name: Klebsiella pneumoniae subsp. pneumoniae


asm_submitter: SASTRA University

organism_name: Escherichia coli UTI89


asm_submitter: Hospital Universitario La Paz

organism_name: Serratia ureilytica


asm_submitter: Zhejiang University School of Medicine

organism_name: Staphylococcus epidermidis


asm_submitter: IMCAS

organism_name: Halomonas sp. 328


organism_name: Staphylococcus aureus


organism_name: Staphylococcus capitis


organism_name: Bacillus cereus


organism_name: Serratia liquefaciens


organism_name: Escherichia coli


organism_name: Klebsiella pneumoniae


asm_submitter: Department of Botany, Kayavattom Campus, University of Kerala, Trivandrum

organism_name: Exiguobacterium abrahamii


asm_submitter: Shandong University at Weihai

organism_name: Winogradskyella marina


asm_submitter: the sixth affiliated hospital of Shenzhen University Health Science Center

organism_name: Enterococcus faecalis


asm_submitter: Hamline University

infraspecific_name: strain=GU

organism_name: Ectopseudomonas mendocina


asm_submitter: Sinop University

organism_name: Nonomuraea cypriaca


asm_submitter: Beijing Forestry University

infraspecific_name: strain=NRRL B-3009

organism_name: Streptomyces olivaceus


asm_submitter: IHU

organism_name: Herminiimonas contaminans


asm_submitter: Rutgers University

infraspecific_name: strain=LJH 1234

organism_name: Salmonella enterica


infraspecific_name: strain=LJH 614


infraspecific_name: strain=FSIS 026


asm_submitter: The Ohio State University

organism_name: Bacillus subtilis


asm_submitter: SRCAMB


asm_submitter: Public Health Agency of Canada

excluded_from_refseq: from large multi-isolate project

organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


organism_name: Salmonella enterica subsp. enterica serovar Molade


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Blockley


asm_submitter: CDC


asm_submitter: National Center for Biotechnology Information


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: US Food and Drug Administration


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


asm_submitter: The Hong Kong University of Science and Technology

organism_name: Escherichia coli


asm_submitter: Institute of Microbiology, National Academy of Sciences of Belarus

organism_name: Erwinia amylovora


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


organism_name: Salmonella enterica subsp. enterica serovar Bovismorbificans


organism_name: Salmonella enterica subsp. enterica serovar Javiana


organism_name: Salmonella enterica subsp. enterica serovar Telelkebir


organism_name: Salmonella enterica subsp. enterica serovar Apapa


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Livingstone


asm_submitter: Health Protection Agency

organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Durham


organism_name: Salmonella enterica subsp. enterica serovar Agama


organism_name: Salmonella enterica subsp. enterica serovar Haifa


organism_name: Salmonella enterica subsp. enterica serovar Durban


organism_name: Salmonella enterica subsp. enterica serovar Mikawasima


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Eboko


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Escherichia coli


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Salmonella enterica


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Worthington


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Brandenburg


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Idikan


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


asm_submitter: USDA FSIS


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Escherichia coli


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


asm_submitter: Chengdu Medical College

organism_name: Companilactobacillus futsaii


asm_submitter: Korea University

organism_name: Pantoea sp. SM3640


asm_submitter: Research Institute for Genetics and Selection of Industrial Microorganisms(Genetika)

organism_name: Rhodococcus sp. M8


asm_submitter: Kyungpook National University

organism_name: Bacillus subtilis


asm_submitter: University of Santiago de Compostela

organism_name: Vibrio europaeus


asm_submitter: InDRE

organism_name: Klebsiella ornithinolytica


asm_submitter: Institut Pasteur

organism_name: Saccharolobus solfataricus


asm_submitter: Czech Academy of Science

organism_name: Actinomycetales bacterium


organism_name: Chitinophagales bacterium


organism_name: Flavobacteriales bacterium


organism_name: Bacteroidales bacterium


organism_name: Betaproteobacteria bacterium


organism_name: Rhodospirillales bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Planctomycetota bacterium


organism_name: Enterobacterales bacterium


organism_name: Lactobacillales bacterium


organism_name: Terriglobales bacterium


organism_name: Rhodobacterales bacterium


organism_name: Hyphomicrobiales bacterium


organism_name: Sphingobacteriales bacterium


organism_name: Lysobacterales bacterium


organism_name: Candidatus Saccharimonadota bacterium


organism_name: Clostridiales bacterium


organism_name: Coriobacteriia bacterium


organism_name: Solirubrobacterales bacterium


organism_name: Actinomycetales bacterium


organism_name: Acidimicrobiales bacterium


asm_submitter: Thankcome Biological Science and Technology (Su Zhou) Co.,LTD.

organism_name: Heyndrickxia coagulans


organism_name: Chitinophagales bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Candidatus Nomurabacteria bacterium


organism_name: Chthoniobacterales bacterium


asm_submitter: Broad Institute

organism_name: Eubacterium sp.


organism_name: Escherichia coli


asm_submitter: National Center for Biotechnology Information

organism_name: Salmonella enterica


asm_submitter: Tibet Agricultural and Animal Husbandry College

organism_name: Clostridiaceae bacterium


organism_name: Bacteroidaceae bacterium


organism_name: Bacilli bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Clostridia bacterium


organism_name: Barnesiella sp.


organism_name: Alistipes sp.


organism_name: Oscillospiraceae bacterium


organism_name: Muribaculaceae bacterium


organism_name: Clostridiales bacterium


organism_name: Akkermansia sp.


organism_name: Bacteroidales bacterium


organism_name: Paludibacteraceae bacterium


organism_name: Kiritimatiellia bacterium


organism_name: Fibrobacteraceae bacterium


organism_name: Acetatifactor sp.


organism_name: Methanobrevibacter sp.


organism_name: Clostridiaceae bacterium


organism_name: Bacteroidaceae bacterium


organism_name: Bacilli bacterium


organism_name: Bacillaceae bacterium


organism_name: Mycoplasmataceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Rikenellaceae bacterium


organism_name: Eubacterium sp.


asm_submitter: UNIVERSITY OF NEW SOUTH WALES

organism_name: Spirochaetales bacterium


organism_name: Synergistales bacterium


organism_name: Desulfovibrionaceae bacterium


organism_name: Lentimicrobiaceae bacterium


organism_name: Ignavibacteria bacterium


asm_submitter: University of Rhode Island

organism_name: Rickettsia sp.


asm_submitter: The Ohio State University

organism_name: Sphingopyxis sp.


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Limnohabitans sp.


organism_name: Roseateles sp.


organism_name: Novosphingobium sp.


organism_name: Devosia sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; many frameshifted proteins

organism_name: Planktothrix agardhii Bin4


organism_name: Allobosea sp.


asm_submitter: Xiamen University

organism_name: Zoogloeaceae bacterium


asm_submitter: University of Sevilla

organism_name: Bartonellaceae bacterium


organism_name: Salmonella enterica


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Staphylococcus pseudintermedius


asm_submitter: Government of Canada

organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Dublin


asm_submitter: The University of Hong Kong

organism_name: Fidelibacterota bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Candidatus Poseidoniales archaeon


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genus undefined


organism_name: Acidobacteriota bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Phycisphaerales bacterium


organism_name: Rhodospirillales bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Nitrososphaerales archaeon


organism_name: Campylobacterales bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Candidatus Latescibacterota bacterium


organism_name: Methylophaga thalassica


organism_name: Pseudomonadales bacterium


organism_name: Fidelibacterota bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Candidatus Poribacteria bacterium


organism_name: Gemmatimonadota bacterium


organism_name: Planctomycetota bacterium


organism_name: Myxococcales bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Cycloclasticus sp.


organism_name: Methylococcales bacterium


organism_name: Candidatus Poseidoniales archaeon


organism_name: Flavobacteriales bacterium


organism_name: Porticoccaceae bacterium


organism_name: Rhodospirillales bacterium


organism_name: Rhodothermales bacterium


organism_name: Candidatus Thioglobus sp.


organism_name: Verrucomicrobiota bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Candidatus Manganitrophaceae bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Nitrospinaceae bacterium


organism_name: Alcanivorax sp.


organism_name: Micavibrio sp.


organism_name: Deltaproteobacteria bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Candidatus Latescibacterota bacterium


organism_name: Myxococcales bacterium


organism_name: Candidatus Thioglobus autotrophicus


organism_name: Candidatus Poseidoniales archaeon


organism_name: Alphaproteobacteria bacterium


organism_name: Planctomycetota bacterium


organism_name: Henriciella marina


organism_name: Flavobacteriales bacterium


organism_name: Pseudomonadales bacterium


organism_name: Porticoccaceae bacterium


annotation_name: Annotation submitted by Colorado State University

annotation_provider: Colorado State University

asm_submitter: Colorado State University

organism_name: Bacteroidota bacterium


organism_name: Candidatus Methylomirabilota bacterium


organism_name: Anaerolineales bacterium


organism_name: Actinomycetota bacterium


organism_name: Magnetococcales bacterium


asm_submitter: DOE Joint Genome Institute

organism_name: Methanomicrobiales archaeon


organism_name: Methanoregulaceae archaeon


organism_name: Candidatus Rokuibacteriota bacterium


organism_name: Methanomicrobia archaeon


organism_name: Deltaproteobacteria bacterium


excluded_from_refseq: contaminated; derived from metagenome; genus undefined


asm_submitter: Sun Yat-Sen University


organism_name: Dehalococcoidia bacterium


organism_name: Parachlamydiales bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Chloroflexota bacterium


organism_name: Steroidobacteraceae bacterium


organism_name: Candidatus Brocadiaceae bacterium


organism_name: Acidobacteriota bacterium


organism_name: Candidatus Dadabacteria bacterium


organism_name: Candidatus Levyibacteriota bacterium


organism_name: Methanobacterium sp.


organism_name: Aquifex aeolicus


organism_name: Pyrodictium sp.


organism_name: Nanobdellota archaeon


organism_name: Sulfurovum sp.


organism_name: Methanothermococcus okinawensis


organism_name: Nautiliaceae bacterium


excluded_from_refseq: contaminated; derived from metagenome


organism_name: Acinetobacter venetianus


organism_name: Halopseudomonas pachastrellae


organism_name: Pyrodictium delaneyi


organism_name: Sulfurivirga caldicuralii


organism_name: Ectopseudomonas oleovorans


organism_name: Thermoprotei archaeon


organism_name: Candidatus Caldarchaeum subterraneum


organism_name: Persephonella sp.


organism_name: Novosphingobium capsulatum


organism_name: Desulfurococcales archaeon


organism_name: Desulfurobacteriaceae bacterium


organism_name: Aquifex aeolicus


organism_name: Leucothrix sp.


organism_name: Desulfocapsa sulfexigens


organism_name: Thiotrichaceae bacterium


organism_name: Candidatus Bipolaricaulota bacterium


organism_name: Planctomycetota bacterium


organism_name: Anaerolineae bacterium


organism_name: Anaerolineaceae bacterium


organism_name: Anaerolineales bacterium


organism_name: Caldilineales bacterium


organism_name: Pyrodictium sp.


organism_name: Thermotoga sp.


organism_name: Methanobacteriota archaeon


organism_name: Thermococcus paralvinellae


organism_name: Candidatus Nanopusillus sp.


organism_name: Methanothermococcus okinawensis


organism_name: Aquifex sp.


organism_name: Leucothrix mucor


organism_name: Psychromonas hadalis


organism_name: Sulfurimonas autotrophica


organism_name: Deltaproteobacteria bacterium


organism_name: Kiloniellaceae bacterium


organism_name: Chromatiales bacterium


organism_name: Archaeoglobus profundus


organism_name: Ignisphaera aggregans


organism_name: Campylobacterales bacterium


organism_name: Anaerolineae bacterium


organism_name: Sulfurovum sp.


organism_name: Minisyncoccota bacterium


organism_name: Arcobacter sp.


organism_name: Lutibacter sp.


organism_name: Sulfurospirillum arcachonense


organism_name: Aquifex aeolicus


organism_name: Bacteroidia bacterium


organism_name: Desulfocapsa sulfexigens


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Methanothermococcus okinawensis


organism_name: Crocinitomix sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Crocinitomicaceae bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Paracoccaceae bacterium


excluded_from_refseq: derived from metagenome


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Sulfurimonas autotrophica


organism_name: Leucothrix sp.


organism_name: Sulfurimonas sp.


organism_name: Campylobacterales bacterium


organism_name: Mariprofundaceae bacterium


organism_name: Leucothrix mucor


organism_name: Candidatus Saccharimonadota bacterium


organism_name: Candidatus Poseidoniales archaeon


organism_name: Marinobacter salarius


organism_name: Fidelibacterota bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Rhodospirillales bacterium


organism_name: Candidatus Nitrosopelagicus sp.


organism_name: Deltaproteobacteria bacterium


organism_name: Nitrospirales bacterium


organism_name: Candidatus Poribacteria bacterium


organism_name: Flavobacteriales bacterium


organism_name: Planctomycetota bacterium


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Methylococcales bacterium


organism_name: Phycisphaerales bacterium


organism_name: Aquifex sp.


organism_name: Chromatiales bacterium


organism_name: Nitrospinaceae bacterium


organism_name: Marinobacter salarius


organism_name: Fidelibacterota bacterium


organism_name: Candidatus Poseidoniales archaeon


organism_name: Flavobacteriaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Myxococcales bacterium


organism_name: Porticoccaceae bacterium


organism_name: Planctomycetota bacterium


organism_name: Rhodospirillales bacterium


organism_name: Gemmatimonadota bacterium


organism_name: Candidatus Obscuribacterales bacterium


organism_name: Methylococcales bacterium


organism_name: Acidobacteriota bacterium


organism_name: Phycisphaerales bacterium


organism_name: Acinetobacter pittii


organism_name: Flavobacteriales bacterium


organism_name: Nitrospirales bacterium


organism_name: Candidatus Poribacteria bacterium


organism_name: Candidatus Poseidoniales archaeon


organism_name: Dehalococcoidia bacterium


asm_submitter: Georgia Institute of Technology

organism_name: Thauera sp.


organism_name: Geobacter anodireducens


asm_submitter: University of Califronia

organism_name: Thalassolituus oleivorans


organism_name: Maricaulis maris


organism_name: Flavobacterium sp.


organism_name: Maricaulis sp.


organism_name: Ulvibacter sp.


organism_name: Alcanivorax sp.


organism_name: Winogradskyella sp.


organism_name: Roseobacter sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Oceanospirillaceae bacterium


organism_name: Methylophaga thiooxydans


organism_name: Methylophaga sp.


organism_name: Salmonella enterica


organism_name: Enterococcus faecium


organism_name: Salmonella enterica subsp. enterica serovar Dublin


infraspecific_name: strain=MSSA

organism_name: Staphylococcus aureus


asm_submitter: University of Neaples Federico II

infraspecific_name: strain=FL 18

organism_name: Alicyclobacillus mali (ex Roth et al. 2021)


asm_submitter: Hospital Universitario La Paz

organism_name: Serratia ureilytica


asm_submitter: SciBear LLC

organism_name: Halonatronomonas betaini


asm_submitter: Ministry of Higher Education Malaysia

organism_name: Aeromonas dhakensis


asm_submitter: Center for Disease Prevention and Control of PLA

organism_name: Proteus mirabilis


asm_submitter: Instituto Oswaldo Cruz

organism_name: Acinetobacter baumannii


organism_name: Klebsiella pneumoniae


organism_name: Pseudomonas aeruginosa


asm_submitter: FOI Swedish Defence Research Agency

organism_name: Francisella tularensis subsp. holarctica


asm_submitter: Icahn School of Medicine at Mount Sinai

organism_name: Lactococcus lactis


organism_name: Citrobacter freundii


organism_name: Streptococcus gordonii


organism_name: Alistipes senegalensis


organism_name: Mediterraneibacter gnavus


organism_name: Bifidobacterium longum


organism_name: Flavonifractor plautii


organism_name: Faecalibacillus intestinalis


excluded_from_refseq: genus undefined

organism_name: [Eubacterium] siraeum


organism_name: Enterococcus faecalis


organism_name: Enterococcus faecium


organism_name: Bifidobacterium bifidum


organism_name: Roseburia faecis


organism_name: Enterococcus gallinarum


organism_name: Clostridium butyricum


organism_name: Phocaeicola vulgatus


organism_name: Clostridium saudiense


organism_name: Dorea longicatena


organism_name: Paraprevotella clara


organism_name: Enterococcus avium


organism_name: Parabacteroides distasonis


organism_name: Eggerthella lenta


organism_name: Blautia obeum


organism_name: Citrobacter amalonaticus


organism_name: Streptococcus salivarius


organism_name: Blautia wexlerae


organism_name: Faecalibacillus intestinalis


organism_name: Clostridium paraputrificum


organism_name: Bifidobacterium bifidum


organism_name: Clostridium sp. D33t1_170424_F3


organism_name: Lactococcus petauri


organism_name: Bifidobacterium breve


organism_name: Turicibacter sanguinis


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Clostridium tertium


organism_name: Clostridium butyricum


organism_name: Collinsella aerofaciens


organism_name: Clostridium sp. D53t1_180928_C8


organism_name: Phocaeicola vulgatus


excluded_from_refseq: unverified source organism; annotation fails completeness check


organism_name: Enterococcus faecalis


organism_name: Clostridium perfringens


organism_name: Bifidobacterium longum


excluded_from_refseq: contaminated


organism_name: Clostridium tepidum


organism_name: Blautia wexlerae


organism_name: Blautia obeum


organism_name: Citrobacter freundii


organism_name: Parabacteroides merdae


organism_name: Streptococcus salivarius


organism_name: Parabacteroides distasonis


organism_name: Citrobacter portucalensis


organism_name: Bifidobacterium breve


organism_name: Mediterraneibacter faecis


organism_name: Clostridium cuniculi


organism_name: Flavonifractor plautii


organism_name: Intestinimonas butyriciproducens


excluded_from_refseq: contaminated; unverified source organism


organism_name: Clostridium saudiense


organism_name: Clostridium tertium


organism_name: Lacticaseibacillus rhamnosus


organism_name: Bacteroides uniformis


organism_name: Turicibacter sanguinis


organism_name: Paraclostridium tenue


organism_name: Phocaeicola vulgatus


organism_name: Clostridium paraputrificum


organism_name: Eggerthella lenta


organism_name: Bacteroides thetaiotaomicron


organism_name: Citrobacter freundii


organism_name: Bifidobacterium longum


organism_name: Enterococcus faecalis


organism_name: Bacteroides faecis


organism_name: Bacteroides xylanisolvens


organism_name: Bacteroides cellulosilyticus


organism_name: Alistipes onderdonkii


organism_name: Paraclostridium bifermentans


organism_name: Parabacteroides distasonis


organism_name: Streptococcus mutans


organism_name: Bacteroides nordii


organism_name: Enterococcus faecium


organism_name: Streptococcus sobrinus


organism_name: Bacteroides finegoldii


organism_name: Serratia ureilytica


organism_name: Romboutsia sp. D33t1_170424_H2


organism_name: Eggerthella lenta


organism_name: Blautia luti


organism_name: Streptococcus parasanguinis


organism_name: Flavonifractor plautii


organism_name: Citrobacter farmeri


organism_name: Streptococcus anginosus


organism_name: Enterococcus faecalis


organism_name: Bacteroides fragilis


organism_name: Blautia wexlerae


organism_name: Streptococcus salivarius


organism_name: Bifidobacterium longum


organism_name: Sarcina ventriculi


organism_name: Staphylococcus capitis


organism_name: Enterocloster clostridioformis


organism_name: Clostridium butyricum


organism_name: Pediococcus acidilactici


organism_name: Bacteroides intestinalis


organism_name: Enterococcus casseliflavus


organism_name: Alistipes onderdonkii


organism_name: Enterococcus durans


organism_name: Faecalibacillus intestinalis


organism_name: Catenibacterium mitsuokai


organism_name: Streptococcus mutans


organism_name: Agathobacter rectalis


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Streptococcus anginosus


organism_name: Blautia wexlerae


organism_name: Mediterraneibacter faecis


organism_name: Lactococcus petauri


organism_name: Bacteroides uniformis


organism_name: Lactobacillus crispatus


organism_name: Enterococcus faecalis


organism_name: Roseburia faecis


organism_name: Bifidobacterium longum


organism_name: Enterococcus avium


organism_name: Bacteroides thetaiotaomicron


organism_name: Staphylococcus epidermidis


organism_name: Clostridium tyrobutyricum


organism_name: Clostridium perfringens


organism_name: Streptococcus mutans


organism_name: Clostridium thermobutyricum


organism_name: Bifidobacterium breve


organism_name: Hydrogeniiclostridium mannosilyticum