infraspecific_name: strain=Symptomatic Infection 3758


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: National Center for Biotechnology Information

assembly_level: Contig

assembly_type: haploid

excluded_from_refseq: from large multi-isolate project

genome_rep: Full

group: bacteria

infraspecific_name: strain=Symptomatic Infection 4216

organism_name: Clostridioides difficile

release_type: Major

version_status: latest


infraspecific_name: strain=Symptomatic Infection 622


infraspecific_name: strain=Symptomatic Infection 788


infraspecific_name: strain=Symptomatic Infection 3997


infraspecific_name: strain=Asymptomatic infection 102


infraspecific_name: strain=Symptomatic Infection 3882


infraspecific_name: strain=Symptomatic Infection 3789


infraspecific_name: strain=Symptomatic Infection 478


infraspecific_name: strain=Symptomatic Infection 3848


infraspecific_name: strain=Symptomatic Infection 3611


infraspecific_name: strain=Symptomatic Infection 617


infraspecific_name: strain=Symptomatic Infection 4062


infraspecific_name: strain=Symptomatic Infection 910


infraspecific_name: strain=Symptomatic Infection 4136


infraspecific_name: strain=Symptomatic Infection 3918


infraspecific_name: strain=Symptomatic Infection 3781


infraspecific_name: strain=Symptomatic Infection 3827


infraspecific_name: strain=Symptomatic Infection 3889


infraspecific_name: strain=Symptomatic Infection 1150


infraspecific_name: strain=Symptomatic Infection 4190


infraspecific_name: strain=Symptomatic Infection 951


infraspecific_name: strain=Symptomatic Infection 4189


infraspecific_name: strain=Symptomatic Infection 3904


infraspecific_name: strain=Symptomatic Infection 3713


infraspecific_name: strain=Symptomatic Infection 3985


infraspecific_name: strain=Symptomatic Infection 3847


infraspecific_name: strain=Symptomatic Infection 4039


infraspecific_name: strain=Symptomatic Infection 3672


infraspecific_name: strain=Symptomatic Infection 3620


infraspecific_name: strain=Symptomatic Infection 4043


infraspecific_name: strain=Symptomatic Infection 3941


infraspecific_name: strain=Symptomatic Infection 3637


infraspecific_name: strain=Symptomatic Infection 3778


infraspecific_name: strain=Asymptomatic infection 166


infraspecific_name: strain=Symptomatic Infection 3826


infraspecific_name: strain=Symptomatic Infection 3656


infraspecific_name: strain=Symptomatic Infection 4008


infraspecific_name: strain=Symptomatic Infection 3926


infraspecific_name: strain=Symptomatic Infection 3693


infraspecific_name: strain=Asymptomatic infection 133


infraspecific_name: strain=Symptomatic Infection 3968


infraspecific_name: strain=Symptomatic Infection 3951


infraspecific_name: strain=Symptomatic Infection 3597


infraspecific_name: strain=Asymptomatic infection 134


infraspecific_name: strain=Symptomatic Infection 4080


infraspecific_name: strain=Symptomatic Infection 3687


infraspecific_name: strain=Symptomatic Infection 3876


infraspecific_name: strain=Symptomatic Infection 4145


infraspecific_name: strain=Symptomatic Infection 3947


infraspecific_name: strain=Symptomatic Infection 4200


infraspecific_name: strain=Symptomatic Infection 3807


infraspecific_name: strain=Symptomatic Infection 4037


infraspecific_name: strain=Symptomatic Infection 3956


infraspecific_name: strain=Symptomatic Infection 3982


infraspecific_name: strain=Symptomatic Infection 3856


infraspecific_name: strain=Symptomatic Infection 912


infraspecific_name: strain=Symptomatic Infection 4172


infraspecific_name: strain=Symptomatic Infection 1110


infraspecific_name: strain=Symptomatic Infection 4143


infraspecific_name: strain=Symptomatic Infection 4033


infraspecific_name: strain=Symptomatic Infection 4089


infraspecific_name: strain=Symptomatic Infection 4128


infraspecific_name: strain=Symptomatic Infection 3760


infraspecific_name: strain=Asymptomatic infection 195


infraspecific_name: strain=Symptomatic Infection 1109


infraspecific_name: strain=Symptomatic Infection 3659


infraspecific_name: strain=Symptomatic Infection 3729


infraspecific_name: strain=Symptomatic Infection 3625


infraspecific_name: strain=Asymptomatic infection 74


infraspecific_name: strain=Symptomatic Infection 3835


infraspecific_name: strain=Symptomatic Infection 3784


infraspecific_name: strain=Symptomatic Infection 3936


infraspecific_name: strain=Symptomatic Infection 795


infraspecific_name: strain=Symptomatic Infection 3891


infraspecific_name: strain=Symptomatic Infection 3823


infraspecific_name: strain=Asymptomatic infection 76


infraspecific_name: strain=Symptomatic Infection 3851


infraspecific_name: strain=Symptomatic Infection 4235


infraspecific_name: strain=Symptomatic Infection 523


infraspecific_name: strain=Symptomatic Infection 3825


infraspecific_name: strain=Symptomatic Infection 3626


infraspecific_name: strain=Symptomatic Infection 4002


infraspecific_name: strain=Symptomatic Infection 3631


infraspecific_name: strain=Symptomatic Infection 3923


infraspecific_name: strain=Asymptomatic infection 131


infraspecific_name: strain=Symptomatic Infection 3865


infraspecific_name: strain=Symptomatic Infection 3577


infraspecific_name: strain=Symptomatic Infection 3969


infraspecific_name: strain=Symptomatic Infection 4188


infraspecific_name: strain=Symptomatic Infection 3732


infraspecific_name: strain=Symptomatic Infection 1111


infraspecific_name: strain=Symptomatic Infection 468


infraspecific_name: strain=Symptomatic Infection 3756


infraspecific_name: strain=Symptomatic Infection 4052


infraspecific_name: strain=Symptomatic Infection 3580


infraspecific_name: strain=Symptomatic Infection 4059


infraspecific_name: strain=Symptomatic Infection 3927


infraspecific_name: strain=Symptomatic Infection 3675


infraspecific_name: strain=Asymptomatic infection 100


infraspecific_name: strain=Symptomatic Infection 4009


infraspecific_name: strain=Symptomatic Infection 3805


infraspecific_name: strain=Symptomatic Infection 3863


infraspecific_name: strain=Symptomatic Infection 3596


infraspecific_name: strain=Symptomatic Infection 3584


infraspecific_name: strain=Symptomatic Infection 3765


infraspecific_name: strain=Symptomatic Infection 3786


infraspecific_name: strain=Symptomatic Infection 3964


infraspecific_name: strain=Symptomatic Infection 616


infraspecific_name: strain=Symptomatic Infection 4222


infraspecific_name: strain=Symptomatic Infection 4058


infraspecific_name: strain=Symptomatic Infection 4230


infraspecific_name: strain=Symptomatic Infection 3867


infraspecific_name: strain=Symptomatic Infection 4121


infraspecific_name: strain=Symptomatic Infection 3791


infraspecific_name: strain=Symptomatic Infection 4079


infraspecific_name: strain=Symptomatic Infection 4164


infraspecific_name: strain=Symptomatic Infection 4041


infraspecific_name: strain=Symptomatic Infection 3922


infraspecific_name: strain=Symptomatic Infection 3583


infraspecific_name: strain=Symptomatic Infection 3906


infraspecific_name: strain=Symptomatic Infection 3944


infraspecific_name: strain=Symptomatic Infection 3869


infraspecific_name: strain=Symptomatic Infection 3933


infraspecific_name: strain=Symptomatic Infection 3704


infraspecific_name: strain=Symptomatic Infection 4179


infraspecific_name: strain=Symptomatic Infection 3618


infraspecific_name: strain=Symptomatic Infection 4072


infraspecific_name: strain=Asymptomatic infection 73


infraspecific_name: strain=Symptomatic Infection 3606


infraspecific_name: strain=Symptomatic Infection 3872


infraspecific_name: strain=Symptomatic Infection 3593


infraspecific_name: strain=Symptomatic Infection 4191


infraspecific_name: strain=Symptomatic Infection 4011


infraspecific_name: strain=Symptomatic Infection 3948


infraspecific_name: strain=Symptomatic Infection 3686


infraspecific_name: strain=Symptomatic Infection 4056


infraspecific_name: strain=Symptomatic Infection 3868


infraspecific_name: strain=Symptomatic Infection 3839


infraspecific_name: strain=Symptomatic Infection 4091


infraspecific_name: strain=Symptomatic Infection 3996


infraspecific_name: strain=Symptomatic Infection 4117


infraspecific_name: strain=Asymptomatic infection 103


infraspecific_name: strain=Symptomatic Infection 3829


infraspecific_name: strain=Symptomatic Infection 4087


infraspecific_name: strain=Symptomatic Infection 3888


infraspecific_name: strain=Symptomatic Infection 4154


infraspecific_name: strain=Symptomatic Infection 1105


infraspecific_name: strain=Symptomatic Infection 4049


infraspecific_name: strain=Symptomatic Infection 4045


infraspecific_name: strain=Symptomatic Infection 4122


infraspecific_name: strain=Symptomatic Infection 3779


infraspecific_name: strain=Symptomatic Infection 3680


infraspecific_name: strain=Symptomatic Infection 3820


infraspecific_name: strain=Symptomatic Infection 1238


infraspecific_name: strain=Symptomatic Infection 3607


infraspecific_name: strain=Symptomatic Infection 3899


infraspecific_name: strain=Symptomatic Infection 3600


infraspecific_name: strain=Symptomatic Infection 1234


infraspecific_name: strain=Symptomatic Infection 4004


infraspecific_name: strain=Asymptomatic infection 97


infraspecific_name: strain=Asymptomatic infection 130


infraspecific_name: strain=Symptomatic Infection 3814


excluded_from_refseq: from large multi-isolate project; genome length too large

infraspecific_name: strain=Symptomatic Infection 4014


infraspecific_name: strain=Asymptomatic infection 193


infraspecific_name: strain=Symptomatic Infection 950


infraspecific_name: strain=Symptomatic Infection 1151


infraspecific_name: strain=Symptomatic Infection 3894


infraspecific_name: strain=Symptomatic Infection 474


infraspecific_name: strain=Symptomatic Infection 4162


infraspecific_name: strain=Symptomatic Infection 3709


infraspecific_name: strain=Symptomatic Infection 4208


infraspecific_name: strain=Symptomatic Infection 3610


infraspecific_name: strain=Symptomatic Infection 3866


infraspecific_name: strain=Symptomatic Infection 3992


infraspecific_name: strain=Symptomatic Infection 3952


infraspecific_name: strain=Symptomatic Infection 3671


infraspecific_name: strain=Symptomatic Infection 3700


infraspecific_name: strain=Symptomatic Infection 3746


infraspecific_name: strain=Symptomatic Infection 4019


infraspecific_name: strain=Symptomatic Infection 3893


infraspecific_name: strain=Symptomatic Infection 4077


infraspecific_name: strain=Symptomatic Infection 625


infraspecific_name: strain=Asymptomatic infection 43


infraspecific_name: strain=Asymptomatic infection 35


infraspecific_name: strain=Symptomatic Infection 4083


infraspecific_name: strain=Symptomatic Infection 3638


infraspecific_name: strain=Symptomatic Infection 3613


infraspecific_name: strain=Asymptomatic infection 108


infraspecific_name: strain=Asymptomatic infection 176


infraspecific_name: strain=Symptomatic Infection 952


infraspecific_name: strain=Asymptomatic infection 154


infraspecific_name: strain=Asymptomatic infection 148


infraspecific_name: strain=Asymptomatic infection 34


infraspecific_name: strain=Asymptomatic infection 2


infraspecific_name: strain=Asymptomatic infection 33


infraspecific_name: strain=Asymptomatic infection 143


infraspecific_name: strain=Symptomatic Infection 597


infraspecific_name: strain=Symptomatic Infection 1860


infraspecific_name: strain=Asymptomatic infection 1


infraspecific_name: strain=Symptomatic Infection 1294


infraspecific_name: strain=Symptomatic Infection 1808


infraspecific_name: strain=Asymptomatic infection 44


infraspecific_name: strain=Symptomatic Infection 1117


infraspecific_name: strain=Symptomatic Infection 469


infraspecific_name: strain=Asymptomatic infection 153


infraspecific_name: strain=Asymptomatic infection 47


infraspecific_name: strain=Asymptomatic infection 46


infraspecific_name: strain=Symptomatic Infection 1631


infraspecific_name: strain=Symptomatic Infection 916


infraspecific_name: strain=Asymptomatic infection 32


infraspecific_name: strain=Symptomatic Infection 1790


infraspecific_name: strain=Asymptomatic infection 3


infraspecific_name: strain=Asymptomatic infection 142


infraspecific_name: strain=Symptomatic Infection 1791


infraspecific_name: strain=Asymptomatic infection 186


infraspecific_name: strain=Symptomatic Infection 3559


infraspecific_name: strain=Symptomatic Infection 3568


infraspecific_name: strain=Asymptomatic infection 45


infraspecific_name: strain=Symptomatic Infection 3567


infraspecific_name: strain=Symptomatic Infection 794


infraspecific_name: strain=Symptomatic Infection 3558


infraspecific_name: strain=Symptomatic Infection 3563


infraspecific_name: strain=Symptomatic Infection 3562


infraspecific_name: strain=Symptomatic Infection 3557


infraspecific_name: strain=Symptomatic Infection 3561


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


asm_submitter: CDC

organism_name: Salmonella enterica


infraspecific_name: strain=Symptomatic Infection 3560


infraspecific_name: strain=Symptomatic Infection 3566


organism_name: Campylobacter coli


organism_name: Escherichia coli


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


asm_submitter: FDA Center for Food Safety and Applied Nutrition


asm_submitter: FDA


organism_name: Shigella flexneri


excluded_from_refseq: contaminated; from large multi-isolate project


organism_name: Vibrio cholerae


organism_name: Listeria monocytogenes


asm_submitter: FDA/CFSAN


organism_name: Shigella sonnei


asm_submitter: Ningbo First Hospital

assembly_level: Complete Genome

organism_name: Providencia rettgeri

paired_asm_comp: identical


asm_submitter: Christian Medical College

organism_name: Burkholderia pseudomallei


asm_submitter: Justus-Liebig-University Giessen


asm_submitter: Research Center of Biotechnology

excluded_from_refseq: derived from metagenome

organism_name: Thermoflexus hugenholtzii


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Aquificota bacterium


organism_name: Hydrogenobacter thermophilus


organism_name: Thermus antranikianii

refseq_category: reference genome


asm_submitter: Vali-e-Asr University of Rafsanjan

organism_name: Bacillus velezensis


asm_submitter: Hunan Normal University

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins


asm_submitter: Yongchuan Hospital of Chongqing Medical University

assembly_level: Chromosome

excluded_from_refseq: contaminated

organism_name: Klebsiella pneumoniae


organism_name: Vibrio parahaemolyticus


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica


asm_submitter: Zhongkai University of Agriculture and Engineering


asm_submitter: Institut Pasteur Guadeloupe

organism_name: Enterobacter oligotrophicus


organism_name: Clostridioides difficile


organism_name: Escherichia coli


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Salmonella enterica subsp. enterica serovar Sangera


organism_name: Salmonella enterica subsp. enterica serovar Oslo


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Paratyphi B var. L(+) tartrate +


asm_submitter: Health Protection Agency


asm_submitter: UNIVERSITY OF SOUTH BOHEMIA

isolate: SYM


isolate: SOD

organism_name: Candidatus Sodalis endolongispinus


asm_submitter: National Center for Biotechnology Information


asm_submitter: Duke University

organism_name: Akkermansia biwaensis


organism_name: Akkermansia muciniphila


excluded_from_refseq: unverified source organism


asm_submitter: Agricultural University of Athens

assembly_level: Scaffold

organism_name: Vibrio alginolyticus


asm_submitter: NCTR/FDA

organism_name: Bacillus toyonensis


asm_submitter: Shenzhen Puensum Genetech Institute

organism_name: Neoakkermansia glycaniphila


asm_submitter: Friedrich Schiller University Jena

excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Thiobacillus sp.


organism_name: Aquabacterium sp.


organism_name: Candidatus Sericytochromatia bacterium


organism_name: Microbacterium sp.


organism_name: Hydrogenophaga sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Nitrospirota bacterium


organism_name: Vitreoscilla sp.


organism_name: Clostridioides difficile


organism_name: Rhizobacter sp.


organism_name: Dechloromonas sp.


organism_name: Phenylobacterium sp.


organism_name: bacterium


organism_name: Pseudomonas umsongensis


organism_name: Acidovorax sp.


organism_name: Roseateles sp.


organism_name: Myxococcales bacterium


organism_name: Rugosibacter sp.


organism_name: Rhodoferax sp.


organism_name: Methyloversatilis discipulorum


organism_name: Hyphomonadaceae bacterium


organism_name: Polaromonas sp.


organism_name: Burkholderiaceae bacterium


organism_name: Sediminibacterium sp.


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Pseudomonas sp.


organism_name: Zoogloea sp.


organism_name: Clostridioides difficile


organism_name: Rubrivivax sp.


asm_submitter: California Institute of Technology

organism_name: Desulfobacterales bacterium


asm_submitter: Huazhong Agricultural University

organism_name: Streptococcus suis


organism_name: Burkholderiales bacterium


asm_submitter: CDC

organism_name: Escherichia coli


asm_submitter: University College Cork

organism_name: Streptococcus salivarius


organism_name: Ruminococcus bromii


organism_name: Sutterella wadsworthensis


organism_name: Ruminococcus sp. MCC718


organism_name: Veillonella parvula


organism_name: Mediterraneibacter faecis


organism_name: Roseburia hominis


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Roseburia inulinivorans


organism_name: Cutibacterium acnes


organism_name: Segatella copri


organism_name: Parabacteroides merdae


organism_name: Parabacteroides distasonis


organism_name: Clostridioides difficile


organism_name: Oscillibacter sp. MCC667


organism_name: Odoribacter splanchnicus


group: archaea

organism_name: Methanobrevibacter smithii


organism_name: Lactiplantibacillus plantarum


organism_name: Secundilactobacillus kimchicus


organism_name: Ligilactobacillus ruminis


organism_name: Levilactobacillus brevis


organism_name: Gemmiger formicilis


organism_name: Fusicatenibacter saccharivorans


organism_name: Pseudoflavonifractor sp. MCC625


organism_name: Faecalibacterium prausnitzii


organism_name: Eubacterium ventriosum


organism_name: Agathobacter rectalis


organism_name: Anaerobutyricum hallii


organism_name: Eubacterium ramulus


organism_name: Escherichia coli


excluded_from_refseq: annotation fails completeness check


excluded_from_refseq: genus undefined

organism_name: Enterobacteriaceae bacterium MCC505


organism_name: Enterococcus faecium


organism_name: Dorea longicatena


organism_name: Enterococcus durans


organism_name: Clostridioides difficile


organism_name: Dorea formicigenerans


organism_name: Enterococcus faecalis


organism_name: Desulfovibrio desulfuricans


organism_name: Coprococcus eutactus


organism_name: Allocoprococcus comes


organism_name: Pseudocoprococcus catus


organism_name: Collinsella aerofaciens


organism_name: [Clostridium] symbiosum


organism_name: Clostridium sp. MCC353


organism_name: Clostridium sp. MCC345


organism_name: Clostridium sp. MCC344


organism_name: Hungatella hathewayi


organism_name: Enterocloster citroniae


organism_name: Clostridium sp. MCC334


organism_name: Enterocloster bolteae


organism_name: Clostridium sp. MCC328


organism_name: Clostridium baratii


organism_name: Catenibacterium mitsuokai


excluded_from_refseq: contaminated; unverified source organism

organism_name: Butyricicoccus faecihominis


organism_name: Blautia wexlerae


organism_name: Blautia sp. MCC283


organism_name: Blautia sp. MCC289


organism_name: Blautia sp. MCC270


organism_name: Blautia faecis


organism_name: Bifidobacterium longum


organism_name: Blautia sp. MCC269


organism_name: Bifidobacterium adolescentis


organism_name: Bacteroides xylanisolvens


organism_name: Barnesiella intestinihominis


organism_name: Phocaeicola vulgatus


organism_name: Bacteroides uniformis


organism_name: Bacteroides thetaiotaomicron


organism_name: Bacteroides salyersiae


organism_name: Bacteroides ovatus


organism_name: Phocaeicola massiliensis


organism_name: Bacteroides fragilis


organism_name: Bacteroides faecis


organism_name: Bacteroides caccae


organism_name: Bacteroides eggerthii


organism_name: Anaerostipes hadrus


organism_name: Phocaeicola dorei


organism_name: Alistipes putredinis


organism_name: Clostridioides difficile


asm_submitter: Vrije Universiteit Brussel

organism_name: Acinetobacter baumannii


asm_submitter: UniKlinik RWTH Aachen

organism_name: Hallella faecis

relation_to_type_material: assembly from type material


asm_submitter: Marquette University

organism_name: Staphylococcus succinus


asm_submitter: University of Copenhagen

infraspecific_name: strain=A023 cl23

organism_name: Vibrio anguillarum


infraspecific_name: strain=A023 #28


infraspecific_name: strain=A023 #16


infraspecific_name: strain=A023 #17


infraspecific_name: strain=A023 #11


asm_submitter: University of Pretoria

infraspecific_name: strain=UPMP 768

organism_name: Escherichia coli


infraspecific_name: strain=UPMP 2078

organism_name: Klebsiella pneumoniae


infraspecific_name: strain=UPMP 2094


infraspecific_name: strain=UPMP 1993


infraspecific_name: strain=UPMP 1548


infraspecific_name: strain=UPMP 2050


infraspecific_name: strain=UPMP 2071


infraspecific_name: strain=UPMP 2089


infraspecific_name: strain=UPMP 1160


infraspecific_name: strain=UPMP 1168


infraspecific_name: strain=UPMP 2010


infraspecific_name: strain=UPMP 2045


infraspecific_name: strain=UPMP 1167


infraspecific_name: strain=UPMP 1991


infraspecific_name: strain=UPMP 2062


infraspecific_name: strain=UPMP 809


infraspecific_name: strain=UPMP 2091


infraspecific_name: strain=UPMP 2007


infraspecific_name: strain=UPMP 589


infraspecific_name: strain=UPMP 1164


infraspecific_name: strain=A023 #9


infraspecific_name: strain=A023 #8


infraspecific_name: strain=A023 #10


excluded_from_refseq: fragmented assembly

infraspecific_name: strain=UPMP 1126


infraspecific_name: strain=A023 cl26


infraspecific_name: strain=A023 cl13


infraspecific_name: strain=A023 cl5


infraspecific_name: strain=A023 cl15


infraspecific_name: strain=A023 #40


infraspecific_name: strain=UPMP 1134


infraspecific_name: strain=UPMP 715


infraspecific_name: strain=A023 #20


infraspecific_name: strain=UPMP 1515


infraspecific_name: strain=UPMP 812


infraspecific_name: strain=UPMP 615


infraspecific_name: strain=UPMP 720


infraspecific_name: strain=UPMP 1158

organism_name: Enterobacter hormaechei


infraspecific_name: strain=UPMP 816


infraspecific_name: strain=UPMP 1131


infraspecific_name: strain=UPMP 2096


infraspecific_name: strain=UPMP 2004


infraspecific_name: strain=UPMP 588


infraspecific_name: strain=UPMP 788


infraspecific_name: strain=UPMP 2046


infraspecific_name: strain=UPMP 784


infraspecific_name: strain=UPMP 818


infraspecific_name: strain=UPMP 1161


infraspecific_name: strain=UPMP 1531


infraspecific_name: strain=UPMP 1150


infraspecific_name: strain=UPMP 609


infraspecific_name: strain=UPMP 819


infraspecific_name: strain=UPMP 1997


infraspecific_name: strain=UPMP 1129


infraspecific_name: strain=UPMP 796


asm_submitter: China CDC

organism_name: Gemella sp. zg-1178


asm_submitter: Institute of Microbiology

organism_name: Mesomycoplasma hyorhinis


asm_submitter: UNMC

organism_name: Staphylococcus aureus


asm_submitter: National Center for Biotechnology Information


asm_submitter: Anses


asm_submitter: Newcastle University

organism_name: Streptococcus oralis


asm_submitter: SEAPHAGES, University of Lagos

organism_name: Bacillus amyloliquefaciens


asm_submitter: Erciyes University

organism_name: Bacillus thuringiensis


organism_name: Salmonella enterica


organism_name: Vibrio cholerae


organism_name: Shigella flexneri


asm_submitter: FDA


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


asm_submitter: CDC


organism_name: Salmonella enterica subsp. enterica serovar Kiambu


asm_submitter: BTU Cottbus-Senftenberg, Institute of Biotechnology

organism_name: Ochrobactrum sp. BTU1


asm_submitter: University of Zurich


asm_submitter: Chungbuk National University

infraspecific_name: strain=SPC-SNU 70-2

organism_name: Levilactobacillus brevis


asm_submitter: Nanjing Forestry University

organism_name: Gemmobacter fulvus


asm_submitter: Faculty of Science, Mahidol University

organism_name: Neisseria gonorrhoeae


asm_submitter: Ministry of Public Health-Thailand

organism_name: Pantoea dispersa


organism_name: Morganella morganii


organism_name: Plesiomonas shigelloides


organism_name: Vibrio parahaemolyticus


organism_name: Shewanella indica


organism_name: Shewanella algae


organism_name: Listeria monocytogenes


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Escherichia coli


organism_name: Salmonella enterica


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


asm_submitter: Australian Government’s Cooperative Research Centres Program

organism_name: Rathayibacter toxicus


asm_submitter: National Center for Biotechnology Information

infraspecific_name: strain=CVM 45379


infraspecific_name: strain=CVM 45378


infraspecific_name: strain=CVM 45365


infraspecific_name: strain=CVM 45364


infraspecific_name: strain=CVM 45375


infraspecific_name: strain=CVM 45374


infraspecific_name: strain=CVM 45377


infraspecific_name: strain=CVM 45376


infraspecific_name: strain=CVM 45383


infraspecific_name: strain=CVM 45381


infraspecific_name: strain=CVM 45382


infraspecific_name: strain=CVM 45386


infraspecific_name: strain=CVM 45384


infraspecific_name: strain=CVM 45366


infraspecific_name: strain=CVM 45387


infraspecific_name: strain=CVM 45385


infraspecific_name: strain=CVM 45388


infraspecific_name: strain=CVM 45390


infraspecific_name: strain=CVM 45392


infraspecific_name: strain=CVM 45391


infraspecific_name: strain=CVM 45393


infraspecific_name: strain=CVM 45394


infraspecific_name: strain=CVM 45367


infraspecific_name: strain=CVM 45395


infraspecific_name: strain=CVM 45396


infraspecific_name: strain=CVM 45399


infraspecific_name: strain=CVM 45400


infraspecific_name: strain=CVM 45397


infraspecific_name: strain=CVM 45403


infraspecific_name: strain=CVM 45402


infraspecific_name: strain=CVM 45368


infraspecific_name: strain=CVM 45404


infraspecific_name: strain=CVM 45405


infraspecific_name: strain=CVM 45369


infraspecific_name: strain=CVM 45370


infraspecific_name: strain=CVM 45373


infraspecific_name: strain=CVM 45380


infraspecific_name: strain=CVM 45389


infraspecific_name: strain=CVM 45372


infraspecific_name: strain=CVM 45371


infraspecific_name: strain=CVM 45401


infraspecific_name: strain=CVM 45398


infraspecific_name: strain=CVM 45406


asm_submitter: Radboud University

organism_name: Kyrpidia spormannii


asm_submitter: USDA

organism_name: Aeromonas jandaei


annotation_name: Annotation submitted by Kyung Hee university

annotation_provider: Kyung Hee university

asm_submitter: Kyung Hee university

organism_name: Streptococcus sp. ZB199


organism_name: Aeromonas hydrophila


asm_submitter: Beijing Institute of Microbiology and Epidemiology

organism_name: Morganella morganii subsp. morganii


excluded_from_refseq: RefSeq annotation failed


asm_submitter: National Cheng Kung University Hospital

infraspecific_name: strain=BCRC 80514

organism_name: Paludibacterium paludis


organism_name: Clostridioides difficile


infraspecific_name: strain=BCRC 80531

organism_name: Paludibacterium yongneupense


organism_name: Paludibacterium sp. B53371


asm_submitter: Nofima


asm_submitter: CDC


asm_submitter: USDA FSIS


asm_submitter: FDA


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: FDA/CFSAN


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Rissen


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Campylobacter lari


organism_name: Escherichia coli


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


infraspecific_name: strain=CVM N20EC4103


organism_name: Salmonella enterica


infraspecific_name: strain=CVM N19EC0238


infraspecific_name: strain=CVM N19EC0239


infraspecific_name: strain=CVM N20EC4102


infraspecific_name: strain=CVM N20EC2150


infraspecific_name: strain=CVM N20EC4107


infraspecific_name: strain=CVM N20EC4106


infraspecific_name: strain=CVM N20EC3376


infraspecific_name: strain=CVM N20EC2221


infraspecific_name: strain=CVM N20EC4109


infraspecific_name: strain=CVM N20EC4108


infraspecific_name: strain=CVM N20EC3430


infraspecific_name: strain=CVM N20EC3439


infraspecific_name: strain=CVM N20EC4105


infraspecific_name: strain=CVM N20EC4111


infraspecific_name: strain=CVM N20EC4104


infraspecific_name: strain=CVM N20EC4112


infraspecific_name: strain=CVM N20EC2495


infraspecific_name: strain=CVM N20EC2518


infraspecific_name: strain=CVM N20EC2494


infraspecific_name: strain=CVM N20EC2508


infraspecific_name: strain=CVM N20EC0715


infraspecific_name: strain=CVM N20EC2505


infraspecific_name: strain=CVM N20EC2513


infraspecific_name: strain=CVM N20EC2496


infraspecific_name: strain=CVM N20EC2512


infraspecific_name: strain=CVM N20EC2511


infraspecific_name: strain=CVM N20EC2516


infraspecific_name: strain=CVM N20EC2519


infraspecific_name: strain=CVM N20EC2517


infraspecific_name: strain=CVM N20EC2526


infraspecific_name: strain=CVM N20EC2531


infraspecific_name: strain=CVM N20EC2544


infraspecific_name: strain=CVM N20EC2534


infraspecific_name: strain=CVM N20EC2560


infraspecific_name: strain=CVM N20EC2557


infraspecific_name: strain=CVM N20EC2565


infraspecific_name: strain=CVM N20EC2591


infraspecific_name: strain=CVM N20EC2573


infraspecific_name: strain=CVM N20EC3342


infraspecific_name: strain=CVM N20EC3345


infraspecific_name: strain=CVM N20EC3357


infraspecific_name: strain=CVM N20EC3352


infraspecific_name: strain=CVM N20EC3360


infraspecific_name: strain=CVM N20EC3363


infraspecific_name: strain=CVM N20EC3396


infraspecific_name: strain=CVM N20EC3393


infraspecific_name: strain=CVM N20EC0730


infraspecific_name: strain=CVM N20EC3421


infraspecific_name: strain=CVM N20EC3427


infraspecific_name: strain=CVM N20EC3424


infraspecific_name: strain=CVM N20EC3401


infraspecific_name: strain=CVM N20EC3866


infraspecific_name: strain=CVM N20EC3629


infraspecific_name: strain=CVM N20EC3863


infraspecific_name: strain=CVM N20EC3869


infraspecific_name: strain=CVM N20EC3451


infraspecific_name: strain=CVM N20EC3433


infraspecific_name: strain=CVM N20EC1620


infraspecific_name: strain=CVM N20EC3442


infraspecific_name: strain=CVM N20EC3445


infraspecific_name: strain=CVM N20EC3611


infraspecific_name: strain=CVM N20EC3872


infraspecific_name: strain=CVM N20EC3460


infraspecific_name: strain=CVM N20EC4050


infraspecific_name: strain=CVM N20EC3888


infraspecific_name: strain=CVM N20EC1624


infraspecific_name: strain=CVM N20EC3880


infraspecific_name: strain=CVM N20EC3875


infraspecific_name: strain=CVM N20EC4063


infraspecific_name: strain=CVM N20EC1678


infraspecific_name: strain=CVM N20EC4051


infraspecific_name: strain=CVM N20EC4065


infraspecific_name: strain=CVM N20EC4061


infraspecific_name: strain=CVM N20EC4074


infraspecific_name: strain=CVM N20EC4067


infraspecific_name: strain=CVM N20EC4077


infraspecific_name: strain=CVM N20EC4076


infraspecific_name: strain=CVM N20EC4075


infraspecific_name: strain=CVM N20EC4078


infraspecific_name: strain=CVM N20EC4079


infraspecific_name: strain=CVM N20EC4080


infraspecific_name: strain=CVM N20EC1695


infraspecific_name: strain=CVM N20EC4081


infraspecific_name: strain=CVM N20EC4082


infraspecific_name: strain=CVM N20EC4087


infraspecific_name: strain=CVM N20EC4090


infraspecific_name: strain=CVM N20EC4094


infraspecific_name: strain=CVM N20EC4086


infraspecific_name: strain=CVM N20EC4083


infraspecific_name: strain=CVM N20EC4084


infraspecific_name: strain=CVM N20EC4085


infraspecific_name: strain=CVM N20EC4088


infraspecific_name: strain=CVM N20EC1718


infraspecific_name: strain=CVM N20EC4092


infraspecific_name: strain=CVM N20EC4093


infraspecific_name: strain=CVM N20EC4095


infraspecific_name: strain=CVM N20EC4096


infraspecific_name: strain=CVM N20EC4098


infraspecific_name: strain=CVM N20EC4099


infraspecific_name: strain=CVM N20EC4097


infraspecific_name: strain=CVM N20EC4101


infraspecific_name: strain=CVM N20EC4100


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Eko


asm_submitter: FDA Center for Food Safety and Applied Nutrition


annotation_name: Annotation submitted by University of Technology Sydney

annotation_provider: University of Technology Sydney

asm_submitter: University of Technology Sydney

organism_name: Acinetobacter baumannii


organism_name: Campylobacter upsaliensis


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Campylobacter coli


organism_name: Staphylococcus aureus


organism_name: Clostridioides difficile


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Staphylococcus pseudintermedius


asm_submitter: Freiburg University

organism_name: Gluconobacter sp. P1C6_b


infraspecific_name: strain=DSM 27644

organism_name: Gluconobacter cerevisiae


organism_name: Acetobacter sp. P1H12_c


organism_name: Acetobacter sp. P5B1


organism_name: Gluconobacter sp. P5B12


organism_name: Gluconobacter sp. P5H9_d


organism_name: Gluconobacter sp. P5H9_a


organism_name: Gluconobacter sp. P1D12_c


infraspecific_name: strain=DSM 7148

organism_name: Gluconobacter cerinus

relation_to_type_material: assembly from heterotypic synonym type material


organism_name: Gluconobacter sp. P5E10


organism_name: Gluconobacter sp. P5E12


asm_submitter: Department of Ecology and Genetics, Limnology and Science for Life Laboratory, Uppsala University

organism_name: Nanobdellota archaeon


organism_name: Bacteroidota bacterium


organism_name: Patescibacteria group bacterium


organism_name: bacterium


organism_name: Candidatus Omnitrophota bacterium


organism_name: Pseudomonadota bacterium


organism_name: Chloroflexota bacterium


organism_name: Thermoplasmatota archaeon


organism_name: Gammaproteobacteria bacterium


organism_name: Microcaldota archaeon


organism_name: Myxococcota bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Armatimonadota bacterium


organism_name: Candidatus Bipolaricaulota bacterium


organism_name: Planctomycetota bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Candidatus Altarchaeota archaeon


organism_name: Spirochaetota bacterium


organism_name: Nanobdellota archaeon


organism_name: Patescibacteria group bacterium


organism_name: bacterium


organism_name: Bacillota bacterium


organism_name: Pseudomonadota bacterium


organism_name: Bacteroidota bacterium


organism_name: Elusimicrobiota bacterium


organism_name: Candidatus Zixiibacteriota bacterium


organism_name: Candidatus Babelota bacterium


organism_name: Candidatus Omnitrophota bacterium


organism_name: Myxococcota bacterium


organism_name: Candidatus Rifleibacteriota bacterium


organism_name: Microcaldota archaeon


organism_name: Thermoplasmatota archaeon


organism_name: Alphaproteobacteria bacterium


organism_name: Acidobacteriota bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Nanobdellota archaeon


organism_name: Patescibacteria group bacterium


organism_name: bacterium


organism_name: Actinomycetota bacterium


organism_name: Pseudomonadota bacterium


organism_name: Planctomycetota bacterium


organism_name: Bacteroidota bacterium


organism_name: Candidatus Zixiibacteriota bacterium


organism_name: Chloroflexota bacterium


organism_name: Candidatus Omnitrophota bacterium


excluded_from_refseq: derived from metagenome; genome length too large; genus undefined

organism_name: Candidatus Eiseniibacteriota bacterium


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genus undefined


organism_name: Verrucomicrobiota bacterium


organism_name: Microcaldota archaeon


organism_name: Myxococcota bacterium


organism_name: Thermoplasmatota archaeon


organism_name: Alphaproteobacteria bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Nanobdellota archaeon


organism_name: Patescibacteria group bacterium


organism_name: bacterium


organism_name: Acidobacteriota bacterium


organism_name: Pseudomonadota bacterium


asm_submitter: BIOFORTE-LAB

organism_name: Acidomonas methanolica


asm_submitter: The Second Clinic Medical College

infraspecific_name: strain=SZY H36

organism_name: Haemophilus sp. SZY H36


asm_submitter: Chulalongkorn University

infraspecific_name: strain=NBRC 110975

organism_name: Paractinoplanes bogorensis


asm_submitter: ICAR Indian Institute of Rice Research

organism_name: Bacillus cabrialesii


infraspecific_name: strain=SZY H68

organism_name: Haemophilus sp. SZY H68


infraspecific_name: strain=SZY H35

organism_name: Haemophilus sp. SZY H35


organism_name: Elusimicrobiota bacterium


infraspecific_name: strain=SZY H8

organism_name: Haemophilus sp. SZY H8


organism_name: Chloroflexota bacterium


organism_name: Bacteroidota bacterium


organism_name: Candidatus Omnitrophota bacterium


organism_name: archaeon


organism_name: Nanobdellota archaeon


organism_name: Actinomycetota bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Patescibacteria group bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Thermoplasmatota archaeon


organism_name: Nitrospinota bacterium


organism_name: Pseudomonadota bacterium


organism_name: Candidatus Zixiibacteriota bacterium


organism_name: bacterium


organism_name: Planctomycetota bacterium


organism_name: Elusimicrobiota bacterium


organism_name: Methanobacteriota archaeon


asm_submitter: Ministry of Natural Resources & Second Institute of Oceanography, Ministry of Natural Resources

organism_name: Rheinheimera oceanensis


asm_submitter: Havforskningsinstituttet

organism_name: Hafnia paralvei


organism_name: Acinetobacter baumannii


asm_submitter: Universiti Kebangsaan Malaysia

organism_name: Vibrio alginolyticus


organism_name: Candidatus Eiseniibacteriota bacterium


asm_submitter: Monash University


organism_name: Actinomycetota bacterium


asm_submitter: University of California, Davis

organism_name: Xanthomonas citri pv. fuscans


organism_name: Xanthomonas sp. MLO165


organism_name: Xanthomonas citri


organism_name: Xanthomonas phaseoli pv. phaseoli


asm_submitter: National Agri-Food Biotechnology Institute

excluded_from_refseq: many frameshifted proteins

organism_name: Bacteroides uniformis


asm_submitter: The First Affiliated Hospital, College of Medicine, Zhejiang University

organism_name: Klebsiella pneumoniae


asm_submitter: Bavarian Health and Food Safety Authority

organism_name: Borreliella bavariensis


asm_submitter: University of Balearic Islands

organism_name: Cobetia sp. 4B


asm_submitter: University of Wisconsin-Madison

organism_name: Spiroplasma endosymbiont of 'Nebria riversi'


asm_submitter: The University of Hong Kong

organism_name: Pimelobacter sp. 30-1


asm_submitter: CDC

excluded_from_refseq: from large multi-isolate project

organism_name: Salmonella enterica


asm_submitter: Health Protection Agency

organism_name: Escherichia coli


asm_submitter: FDA


asm_submitter: Public Health Agency of Canada

organism_name: Salmonella enterica subsp. enterica serovar Thompson


organism_name: Campylobacter jejuni


asm_submitter: Centers for Disease Control and Prevention


organism_name: Campylobacter coli


asm_submitter: Vet-LIRN-CVM-FDA


asm_submitter: USDA FSIS


annotation_name: Annotation submitted by University Konstanz

annotation_provider: University Konstanz

asm_submitter: University Konstanz

infraspecific_name: strain=BoRhaA

organism_name: Pelorhabdus rhamnosifermentans


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: FDA/CFSAN

organism_name: Listeria monocytogenes


asm_submitter: Center for Food Safety and Applied Nutrition


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


asm_submitter: National Center for Biotechnology Information

organism_name: Clostridioides difficile


organism_name: Shigella flexneri


asm_submitter: HZI-Helmholtz Centre for Infection Research

infraspecific_name: strain=BCCM/LGM 28823

organism_name: Zooshikella ganghwensis


organism_name: Zooshikella harenae


excluded_from_refseq: from large multi-isolate project; genome length too large


organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar London


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


asm_submitter: FDA Center for Food Safety and Applied Nutrition


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Stanley


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul


asm_submitter: Israel Institute for Biological Research

isolate: EnvH

organism_name: Candidatus Pantoea haifensis


isolate: EnvD

organism_name: Candidatus Pantoea bituminis


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Napoli


organism_name: Clostridioides difficile


asm_submitter: Technical University of Munich

infraspecific_name: strain=PCC 6803

organism_name: Synechocystis sp. PCC 6803


asm_submitter: Duke University

organism_name: Akkermansia massiliensis


organism_name: Akkermansia muciniphila


organism_name: Akkermansia biwaensis


asm_submitter: University of Bonn

organism_name: Lysobacter sp. K5869


asm_submitter: Fundacion Ciencia y Vida

infraspecific_name: strain=ATCC 19703

organism_name: Acidithiobacillus concretivorus


asm_submitter: CodelcoTech

infraspecific_name: strain=DSM 16786

organism_name: Acidithiobacillus ferrooxidans


organism_name: Acidithiobacillus montserratensis


infraspecific_name: strain=KU

organism_name: Acidithiobacillus caldus


organism_name: Acidithiobacillus albertensis


infraspecific_name: strain=DSM 8584

organism_name: Acidithiobacillus caldus ATCC 51756


infraspecific_name: strain=F


organism_name: Acidithiobacillus thiooxidans


organism_name: Acidithiobacillus sulfurivorans


infraspecific_name: strain=Malay

organism_name: Acidithiobacillus ferriphilus


infraspecific_name: strain=ATCC 21835


excluded_from_refseq: genome length too large; not used as type

infraspecific_name: strain=DSM 22755

organism_name: Acidithiobacillus ferrivorans


organism_name: Igneacidithiobacillus copahuensis


organism_name: Acidithiobacillus sp. VAN18-2


organism_name: Clostridioides difficile


organism_name: Acidithiobacillus sp. CV18-3


organism_name: Acidithiobacillus sp. CV18-2


organism_name: Acidithiobacillus sp. BN09-2


organism_name: Acidithiobacillus sp. VAN18-4


infraspecific_name: strain=MNG


organism_name: Acidithiobacillus ferrooxidans F221


organism_name: Acidithiobacillus ferrooxidans


organism_name: Acidithiobacillus ferruginosus


infraspecific_name: strain=DSM 583

organism_name: Acidithiobacillus ferridurans


infraspecific_name: strain=ATCC 33020


infraspecific_name: strain=DSM 9465


infraspecific_name: strain=ATCC 8085


infraspecific_name: strain=ATCC 15494


infraspecific_name: strain=DSM 100412


infraspecific_name: strain=ACH


asm_submitter: Public Health Agency of Canada

organism_name: Salmonella enterica subsp. enterica serovar Javiana


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. houtenae serovar 50:g,z51:-


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Virchow


organism_name: Clostridioides difficile


asm_submitter: Chinese Center for Disease Control and Prevention

organism_name: Bacteroides sp. HF-4919


asm_submitter: International Center for Chemical and Biological Sciences

organism_name: Chryseobacterium indologenes


asm_submitter: School of life science

organism_name: Nocardia albiluteola


asm_submitter: Hohai Univercity

organism_name: Paracoccus marinaquae


asm_submitter: Saurashtra University

excluded_from_refseq: derived from metagenome

organism_name: Pseudomonas indica


asm_submitter: University Sultan Zainal Abidin

organism_name: Staphylococcus aureus


asm_submitter: Massachusetts Institute of Technology

organism_name: Pseudotamlana agarivorans


organism_name: Psychrosphaera sp. I2R16


organism_name: Celeribacter halophilus


organism_name: Shimia thalassica


organism_name: Psychrosphaera sp. F3M07


organism_name: Arenibacter algicola


organism_name: Reinekea forsetii


organism_name: Vibrio splendidus


organism_name: Marinobacter sp. F3R08


organism_name: Saccharophagus degradans


organism_name: Vibrio cyclitrophicus


organism_name: Reichenbachiella agariperforans


organism_name: Pacificibacter marinus


organism_name: Vibrio hepatarius


organism_name: Winogradskyella psychrotolerans


excluded_from_refseq: contaminated

organism_name: Gilvimarinus agarilyticus


organism_name: Colwellia sp. E2M01


organism_name: Paracoccus sp. C2R09


organism_name: Aliiglaciecola lipolytica


organism_name: Maribacter dokdonensis


organism_name: Citreicella sp. C3M06


organism_name: Zobellia sp. B3R18


organism_name: Zobellia uliginosa


organism_name: Colwellia sp. D2M02


organism_name: Marinobacter salexigens


organism_name: Aestuariibacter sp. A3R04


organism_name: Lacinutrix sp. C3R15


organism_name: Pseudoalteromonas sp. C2R02


organism_name: Amphritea atlantica


organism_name: Roseovarius nubinhibens


organism_name: Tritonibacter mobilis


organism_name: Colwellia sp. C2M11


organism_name: Cobetia amphilecti


organism_name: Alteromonas sp. C1M14


organism_name: Lentibacter algarum


organism_name: Polaribacter vadi


organism_name: Psychrosphaera sp. B3R10


organism_name: Octadecabacter sp. B2R22


organism_name: Paraglaciecola arctica


organism_name: Zobellia galactanivorans


organism_name: Paraglaciecola chathamensis


organism_name: Cellulophaga baltica


organism_name: Poseidonibacter lekithochrous


asm_submitter: University of Pavia

organism_name: Proteus mirabilis


asm_submitter: Chinese Academy of Agricultural Sciences

excluded_from_refseq: unverified source organism; many frameshifted proteins

organism_name: Ralstonia solanacearum


asm_submitter: Servicio Antimicrobianos, INEI-ANLIS "Dr. Carlos G. Malbran"

organism_name: Providencia rettgeri


asm_submitter: Jeju National University

organism_name: Bacillus sp. JNUCC-22


asm_submitter: University of Zurich

organism_name: Clostridium estertheticum


infraspecific_name: strain=DSM 14206

organism_name: Clostridium bowmanii


organism_name: Clostridium algidicarnis


organism_name: Clostridium sp. CF011


organism_name: Clostridium gasigenes


organism_name: Clostridium tagluense


infraspecific_name: strain=DSM 14207

organism_name: Clostridium psychrophilum


infraspecific_name: strain=DSM 14205

organism_name: Clostridium lacusfryxellense


organism_name: Clostridium sp. CF012


infraspecific_name: strain=DSM 14204

organism_name: Clostridium frigoris


asm_submitter: West China Hospital, Sichuan University

organism_name: Klebsiella pneumoniae


infraspecific_name: strain=DSM 17811

organism_name: Clostridium sp. DSM 17811


asm_submitter: Kasetsart University

organism_name: Staphylococcus aureus


asm_submitter: Unique Biotech Limited

organism_name: Shouchella clausii


asm_submitter: Nanjing Agriculture University

organism_name: Escherichia coli


asm_submitter: Malaysia Genome Institute, National Institutes of Biotechnology Malaysia

organism_name: Roseovarius sp. PS-C2


asm_submitter: Beijing Forestry University

organism_name: Sphingomonas quercus


asm_submitter: Instituto de Higiene

organism_name: Acinetobacter soli


infraspecific_name: strain=HHU G3-2

organism_name: Pseudomaricurvus albidus


organism_name: Acinetobacter baumannii


organism_name: Acinetobacter nosocomialis


organism_name: Acinetobacter seifertii


asm_submitter: Huazhong Agricultural University

infraspecific_name: strain=FJxs

organism_name: Sinomicrobium weinanense


asm_submitter: sun-yat sen university

infraspecific_name: strain=SYSU M49105

organism_name: Deinococcus aestuarii


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: National Center for Biotechnology Information

organism_name: Clostridioides difficile


asm_submitter: FDA/CFSAN


asm_submitter: IHU-Mediterranee Infection

organism_name: Candidatus Minimicrobia vallesae


organism_name: Candidatus Minimicrobia naudis


asm_submitter: Jiangnan University

organism_name: Novisyntrophococcus fermenticellae


asm_submitter: Yunnan Agricultural University

organism_name: Limosilactobacillus fermentum


asm_submitter: China CDC

organism_name: Arthrobacter sunyaminii


asm_submitter: Zhejiang Ocean University

organism_name: Streptomyces sp. YPW6


organism_name: Gemella sp. zg-570


asm_submitter: Indonesian Institue of Sciences

organism_name: Bacillus velezensis


asm_submitter: Health Protection Agency

organism_name: Shigella sonnei


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


organism_name: Salmonella enterica subsp. enterica serovar Tennessee


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul


organism_name: Salmonella enterica subsp. enterica serovar Rissen


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Anecho


organism_name: Salmonella enterica subsp. enterica serovar Elisabethville


organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Indiana


organism_name: Salmonella enterica subsp. enterica serovar Aba


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Paratyphi B var. L(+) tartrate +


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


asm_submitter: FDA


asm_submitter: CDC

organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Chailey


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Muenster


asm_submitter: FDA Center for Food Safety and Applied Nutrition


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Alachua


organism_name: Salmonella enterica subsp. enterica serovar Manhattan


asm_submitter: Animal and Plant Quarantine Agency

organism_name: Staphylococcus pseudintermedius


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Enterobacter roggenkampii MGH 34


organism_name: Citrobacter freundii


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica


asm_submitter: USDA FSIS

organism_name: Campylobacter jejuni


asm_submitter: Public Health Agency of Canada

organism_name: Salmonella enterica subsp. enterica serovar Typhi


organism_name: Salmonella enterica subsp. enterica serovar Oranienburg


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul


organism_name: Listeria monocytogenes


organism_name: Escherichia coli


asm_submitter: Centers for Disease Control and Prevention


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Brandenburg


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Campylobacter lari


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Litchfield


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Reading


organism_name: Salmonella enterica subsp. enterica serovar Bovismorbificans


organism_name: Salmonella enterica subsp. enterica serovar Ohio


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica


organism_name: Campylobacter upsaliensis


asm_submitter: Nanjing Agricultural University

organism_name: Rhizobium sp. X9


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Thompson


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul


organism_name: Salmonella enterica subsp. enterica serovar Oranienburg


organism_name: Salmonella enterica subsp. enterica serovar Hartford


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: National Center for Biotechnology Information

organism_name: Clostridioides difficile


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Typhi


asm_submitter: Heidelberg University Hospital

organism_name: Enterobacter roggenkampii


asm_submitter: Kyungpook National University

organism_name: Priestia aryabhattai


asm_submitter: University of Innsbruck

organism_name: Polynucleobacter sp. UK-Mo-2m-Kol15


organism_name: Polynucleobacter alcilacus


organism_name: Polynucleobacter sp. UK-Kesae-W10


organism_name: Polynucleobacter sp. UK-Gri1-W3


organism_name: Polynucleobacter sp. UB-Tiil-W10


organism_name: Polynucleobacter sp. UB-Piko-W3


organism_name: Polynucleobacter sp. Tro8-14-1


organism_name: Polynucleobacter sp. P1-05-14


organism_name: Polynucleobacter sp. MWH-Post4-6-1


organism_name: Polynucleobacter parvulilacunae


organism_name: Polynucleobacter sp. Nonnen-W13


organism_name: Polynucleobacter finlandensis


organism_name: Polynucleobacter sp. MWH-Loch1C5


organism_name: Polynucleobacter sp. MWH-Jannik1A5


organism_name: Polynucleobacter sp. MWH-HuK1


organism_name: Polynucleobacter hallstattensis


organism_name: Polynucleobacter sp. MWH-Berg-3C6


organism_name: Polynucleobacter sp. MWH-Creno-3A4


organism_name: Polynucleobacter sp. MG-27-Goln-C1


organism_name: Polynucleobacter sp. Latsch14-2


organism_name: Polynucleobacter wuianus


organism_name: Polynucleobacter sp. JS-Polo-80-F4


organism_name: Polynucleobacter sp. JS-Safj-400b-B2


organism_name: Polynucleobacter sp. es-GGE-1


organism_name: Polynucleobacter sp. JS-Fieb-80-E5


organism_name: Polynucleobacter sp. Fuers-14


organism_name: Polynucleobacter sp. es-MAR-4


organism_name: Polynucleobacter sp. AP-Reno-20A-A9


organism_name: Polynucleobacter sp. CS-Odin-A6


organism_name: Polynucleobacter sp. AP-Melu-500A-A1


organism_name: Polynucleobacter sp. AP-RePozz3-80-G7


organism_name: Polynucleobacter nymphae


organism_name: Polynucleobacter sp. AP-Latsch-80-C2


organism_name: Polynucleobacter bastaniensis


organism_name: Polynucleobacter sp. AP-Kaivos-20-H2


organism_name: Polynucleobacter sp. AP-Capit-er-40B-B4


organism_name: Polynucleobacter sp. AP-Feld-500C-C5


organism_name: Polynucleobacter sp. AM-26B4


organism_name: Polynucleobacter sp. 80A-SIGWE


organism_name: Polynucleobacter sp. 78F-HAINBA


organism_name: Polynucleobacter sp. AM-25C3


organism_name: Polynucleobacter sp. 71A-WALBACH


organism_name: Polynucleobacter sp. 30F-ANTBAC


organism_name: Polynucleobacter sp. 31A-FELB


organism_name: Polynucleobacter sp. 86C-FISCH


organism_name: Polynucleobacter sp. 15G-AUS-farblos


organism_name: Polynucleobacter sp. 73C-SIWE


asm_submitter: Instituto de Quimica

organism_name: Rhodoferax sp.


organism_name: Methylobacterium sp.


organism_name: Sediminibacterium sp.


organism_name: Mycobacterium sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Candidatus Allofontibacter sp.


organism_name: Kapaibacterium sp. (SeqCode)


organism_name: Candidatus Planktophila sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Phycisphaerales bacterium


organism_name: Beijerinckiaceae bacterium


organism_name: Ferruginibacter sp.


organism_name: Burkholderiaceae bacterium


organism_name: Polynucleobacter sp.


organism_name: Actinomycetota bacterium


organism_name: Candidatus Nanopelagicaceae bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Limnohabitans sp.


organism_name: Dechloromonas sp.


organism_name: Rhodocyclaceae bacterium


organism_name: Solirubrobacterales bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Ilumatobacteraceae bacterium


organism_name: Flavobacterium sp.


organism_name: Mycobacterium sp.


organism_name: Kapaibacterium sp. (SeqCode)


organism_name: Solirubrobacteraceae bacterium


organism_name: Candidatus Tayloriibacteriota bacterium


organism_name: Nevskiaceae bacterium


organism_name: Chitinophagaceae bacterium


organism_name: Chthoniobacterales bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Flavobacteriales bacterium


organism_name: Candidatus Nanopelagicaceae bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly


organism_name: Candidatus Omnitrophota bacterium


organism_name: Candidatus Methylopumilus sp.


organism_name: Limnohabitans sp.


organism_name: Bacteroidota bacterium


asm_submitter: Indian Institute of Technology

infraspecific_name: strain=IITK SM2

organism_name: Citrobacter youngae


asm_submitter: Hohai Univercity

organism_name: Marixanthotalea marina


asm_submitter: Quadram Institutte

organism_name: Candidatus Phocaeicola faecigallinarum


asm_submitter: Institute of Microbial Technology

organism_name: Acinetobacter baumannii


asm_submitter: Guangxi Academy of Science

organism_name: Streptomyces niphimycinicus


organism_name: Candidatus Treponema excrementipullorum


organism_name: Candidatus Lactobacillus pullistercoris


organism_name: Candidatus Paraprevotella stercoravium


organism_name: Candidatus Fusobacterium pullicola


organism_name: Candidatus Ureaplasma intestinipullorum


organism_name: Candidatus Oceanisphaera merdipullorum


organism_name: Candidatus Acinetobacter avistercoris


organism_name: Candidatus Phocaeicola merdigallinarum


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Candidatus Niameybacter stercoravium


organism_name: Candidatus Phocaeicola faecipullorum


organism_name: Candidatus Anaerobiospirillum pullicola


asm_submitter: Hospital Universitari Vall d'Hebron

organism_name: Escherichia coli


asm_submitter: Center for Genomic Sciences, National Autonomous University of Mexico (UNAM)

organism_name: Cronobacter sakazakii


asm_submitter: Inner Mongolia Agricultural University

organism_name: Bacillus subtilis


organism_name: Bacillus cereus


asm_submitter: Huazhong agricultural university

organism_name: Limosilactobacillus fermentum


organism_name: Limosilactobacillus reuteri


asm_submitter: Tianjin university of science and technology

organism_name: Corynebacterium glutamicum


asm_submitter: University of Maryland, School of Medicine


organism_name: Escherichia coli TW11681


infraspecific_name: strain=E275 a


asm_submitter: University of Pennsylvania

organism_name: Clostridioides difficile


asm_submitter: University of Western Australia


asm_submitter: Centers for Disease Control, Taiwan

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


asm_submitter: Yunnan Institute of Microbiology

infraspecific_name: strain=YIM 96748

organism_name: Amycolatopsis aidingensis


asm_submitter: Faculty of Public Health

organism_name: Streptococcus suis


asm_submitter: NASA Florida Space Grant Consortium

organism_name: Curtobacterium aetherium


asm_submitter: Probiotics Microbiome Convergence Center

organism_name: Lactobacillus crispatus


asm_submitter: Zhejiang University

organism_name: Klebsiella pneumoniae


asm_submitter: Universidad Nacional Autonoma de Mexico

organism_name: Bacillus thuringiensis


asm_submitter: Jeju National University

organism_name: Bacillus sp. JNUCC-24


asm_submitter: The Roslin Institute, University of Edinburgh

organism_name: Staphylococcus coagulans


asm_submitter: CDC

organism_name: Salmonella enterica


asm_submitter: National Center for Biotechnology Information

isolate: clinical

organism_name: Shigella sonnei


asm_submitter: Centers for Disease Control and Prevention


organism_name: Escherichia coli


asm_submitter: MACS Agharkar Research Institute

organism_name: Methylosinus sp. KRF6


asm_submitter: Oklahoma State University - BIOinfOSU

organism_name: Lactococcus lactis


annotation_name: Annotation submitted by Air Force Research Laboratory

annotation_provider: Air Force Research Laboratory

asm_submitter: Air Force Research Laboratory

organism_name: Delftia acidovorans


organism_name: Clostridioides difficile


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Muenster


organism_name: Salmonella enterica subsp. enterica serovar Berta


organism_name: Salmonella enterica subsp. enterica serovar Rissen


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica


asm_submitter: L'Oreal

organism_name: Sphingobium xenophagum


asm_submitter: CHINA Center for Disease Control and Prevention

organism_name: Collinsella sp. zg1085


asm_submitter: Korea University

excluded_from_refseq: contaminated; unverified source organism

organism_name: Bacillus sp. NP157


organism_name: Subtercola sp. PAMC28395


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Vibrio cholerae


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Uganda


asm_submitter: FDA Center for Food Safety and Applied Nutrition


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Clostridioides difficile


asm_submitter: Department of Ecology and Genetics, Limnology and Science for Life Laboratory, Uppsala University

organism_name: Patescibacteria group bacterium


organism_name: Candidatus Omnitrophota bacterium


organism_name: Actinomycetota bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Pseudomonadota bacterium


organism_name: bacterium


organism_name: Acidobacteriota bacterium


organism_name: Nanobdellota archaeon


organism_name: Methanobacteriota archaeon


organism_name: Candidatus Delongbacteria bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Candidatus Altarchaeota archaeon


organism_name: Bacillota bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Candidatus Babelota bacterium


organism_name: Planctomycetota bacterium


organism_name: Nitrospinota bacterium


organism_name: Patescibacteria group bacterium


organism_name: Candidatus Omnitrophota bacterium


organism_name: Thermoplasmatota archaeon


organism_name: Clostridioides difficile


organism_name: Actinomycetota bacterium


organism_name: Pseudomonadota bacterium


organism_name: bacterium


organism_name: Nanobdellota archaeon


organism_name: Chloroflexota bacterium


organism_name: Methanobacteriota archaeon


organism_name: Acidobacteriota bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Candidatus Altarchaeota archaeon


organism_name: Gammaproteobacteria bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Bacteroidota bacterium


organism_name: Bacillota bacterium


organism_name: Patescibacteria group bacterium


organism_name: Candidatus Omnitrophota bacterium


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Thermoplasmatota archaeon


organism_name: Pseudomonadota bacterium


organism_name: Clostridioides difficile


organism_name: Enterococcus faecalis


asm_submitter: Fu Jen Catholic University

organism_name: Dickeya dadantii


asm_submitter: NORTH BENGAL UNIVERSITY

organism_name: Verticiella alkaliphila


excluded_from_refseq: unverified source organism

organism_name: Rhodococcus sp. GG48


organism_name: Shigella sp. GCP5


organism_name: Bacillus sp. GG161


asm_submitter: Universidad Nacional de Quilmes

organism_name: Pseudomonas chlororaphis subsp. aurantiaca


asm_submitter: Facultad de Ciencias Exactas, Universidad Nacional de La Plata

organism_name: Pseudomonas sp. BF61


asm_submitter: CDC


organism_name: Enterococcus faecium


asm_submitter: Louisiana State University

organism_name: Azospira inquinata


asm_submitter: Institute of Marine

organism_name: Bacillus toyonensis


asm_submitter: Center for Laboratory Medicine

organism_name: Cedecea davisae


asm_submitter: University of Florence

organism_name: Klebsiella pneumoniae subsp. pneumoniae


organism_name: Klebsiella pneumoniae


organism_name: Shigella flexneri


asm_submitter: National Center for Biotechnology Information


organism_name: Salmonella enterica


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


asm_submitter: Zhejiang University

organism_name: Staphylococcus aureus


asm_submitter: University of South Florida

organism_name: Verrucosispora sioxanthis CWR15_Gen1


organism_name: Verrucosispora sioxanthis CWR15_Gen3


asm_submitter: Helsinki University

organism_name: Arcanobacterium phocae


asm_submitter: US FDA

organism_name: Mycoplasma sp. CSL7491-lung


infraspecific_name: strain=CSL 4779

organism_name: Mycoplasma zalophidermidis


organism_name: Mycoplasma zalophi


organism_name: Mycoplasma miroungigenitalium


infraspecific_name: strain=CSL 5346


asm_submitter: Washington University in St. Louis


asm_submitter: Kansas State University

infraspecific_name: strain=900 A

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


infraspecific_name: strain=1387 A


infraspecific_name: strain=931 A


infraspecific_name: strain=1399 A


infraspecific_name: strain=888 A


infraspecific_name: strain=884 A


infraspecific_name: strain=867 A


infraspecific_name: strain=815 A


infraspecific_name: strain=720 A


infraspecific_name: strain=693 A


infraspecific_name: strain=685 A


infraspecific_name: strain=669 A


infraspecific_name: strain=647 A


infraspecific_name: strain=648 A


infraspecific_name: strain=642 A


infraspecific_name: strain=643 A


infraspecific_name: strain=633 A


infraspecific_name: strain=637 A


infraspecific_name: strain=624 A


infraspecific_name: strain=612 A


infraspecific_name: strain=569 A


infraspecific_name: strain=565 A


infraspecific_name: strain=602 A


infraspecific_name: strain=541 A


infraspecific_name: strain=503 B


infraspecific_name: strain=502 A


infraspecific_name: strain=397 A


infraspecific_name: strain=356 A


infraspecific_name: strain=352 A


infraspecific_name: strain=350 A


infraspecific_name: strain=333 A


infraspecific_name: strain=337 A


infraspecific_name: strain=325 A


infraspecific_name: strain=329 A


infraspecific_name: strain=317 A


infraspecific_name: strain=309 A


infraspecific_name: strain=315 B


infraspecific_name: strain=288 A


infraspecific_name: strain=286 A


infraspecific_name: strain=265 A


infraspecific_name: strain=268 A


infraspecific_name: strain=120 A


infraspecific_name: strain=157 A


asm_submitter: Univ. of Maryland

organism_name: Vibrio cholerae


asm_submitter: The Institute of Microbiology of the Chinese Academy of Sciences

organism_name: Clostridium senegalense


organism_name: Bacillus albus


organism_name: Bacillus safensis


organism_name: Intestinimonas butyriciproducens


organism_name: Heyndrickxia oleronia


organism_name: Bacillus atrophaeus


organism_name: Bacillus halotolerans


excluded_from_refseq: genome length too small

organism_name: Agathobacter rectalis


organism_name: Bacillus velezensis


organism_name: Lysinibacillus capsici


organism_name: Lactococcus lactis


organism_name: Tissierella praeacuta


organism_name: Allocoprococcus comes


organism_name: Virgibacillus proomii


organism_name: Bacillus pumilus


organism_name: Levilactobacillus brevis


organism_name: Staphylococcus caprae


organism_name: Weissella confusa


excluded_from_refseq: annotation fails completeness check

organism_name: Anaerostipes hadrus


organism_name: Clostridium cochlearium


organism_name: Limosilactobacillus reuteri


organism_name: Clostridium sporogenes


organism_name: Paraclostridium bifermentans


organism_name: Ligilactobacillus animalis


organism_name: Lactiplantibacillus argentoratensis


organism_name: Clostridioides difficile


organism_name: Clostridium bornimense


organism_name: Staphylococcus capitis


organism_name: Eubacterium callanderi


organism_name: Anaerosalibacter bizertensis


organism_name: Ligilactobacillus saerimneri


organism_name: Metaclostridioides mangenotii


organism_name: Lactobacillus johnsonii


organism_name: Tissierella carlieri


organism_name: Lacticaseibacillus paracasei


organism_name: Bacillus paralicheniformis


organism_name: Sarcina ventriculi


organism_name: Streptococcus lutetiensis


organism_name: Paenibacillus lautus


organism_name: Anaerocolumna aminovalerica


organism_name: Caldifermentibacillus hisashii


organism_name: Intestinibacter bartlettii


organism_name: Paenibacillus barcinonensis


organism_name: Enterococcus faecalis


organism_name: Enterococcus gallinarum


organism_name: Enterococcus raffinosus


organism_name: Enterococcus avium


organism_name: Enterococcus devriesei


organism_name: Bacteroides cellulosilyticus


organism_name: Stenotrophomonas maltophilia


organism_name: Pantoea septica


organism_name: Klebsiella quasipneumoniae


organism_name: Citrobacter cronae


organism_name: Shigella sonnei


organism_name: Proteus mirabilis


organism_name: Cutibacterium acnes


organism_name: Serratia ureilytica


organism_name: Eggerthella lenta


organism_name: Paraeggerthella hongkongensis


organism_name: Cellulomonas hominis


organism_name: Ruminococcus sp. MSJ-25


organism_name: Tissierella pigra


organism_name: Tissierella simiarum


organism_name: Acetanaerobacterium sp. MSJ-12


organism_name: Anaerobutyricum soehngenii


organism_name: Intestinimonas sp. MSJ-38


organism_name: Kineothrix sp. MSJ-39


organism_name: Pseudoflavonifractor sp. MSJ-37


organism_name: Blautia sp. MSJ-36


organism_name: Paenibacillus sp. MSJ-34


organism_name: Oscillibacter sp. MSJ-31


organism_name: Pseudoflavonifractor sp. MSJ-30


organism_name: Caproiciproducens sp. MSJ-32


organism_name: Virgibacillus sp. MSJ-26


organism_name: Acetivibrio sp. MSJd-27


organism_name: Blautia sp. MSJ-19


organism_name: Anaerotignum sp. MSJ-24


organism_name: Anaerostipes sp. MSJ-23


organism_name: Eubacterium sp. MSJ-21


organism_name: Lachnoclostridium sp. MSJ-17


organism_name: Roseburia sp. MSJ-14


organism_name: Eubacterium sp. MSJ-13


organism_name: Falcatimonas sp. MSJ-15


organism_name: Clostridium mobile


organism_name: Staphylococcus aureus


organism_name: Clostridium sp. MSJ-8


organism_name: Butyricicoccus intestinisimiae


asm_submitter: Aarhus University

organism_name: Cutibacterium acnes


organism_name: Blautia sp. MSJ-9


organism_name: Paenibacillus brevis


organism_name: Amphibacillus sp. MSJ-3


organism_name: Clostridium simiarum


organism_name: Dysosmobacter acutus


organism_name: Alkaliphilus flagellatus


asm_submitter: Loyola University Chicago

organism_name: Corynebacterium aurimucosum


organism_name: Peptoniphilus ovalis


organism_name: Streptococcus anginosus


organism_name: Aerococcus mictus


organism_name: Corynebacterium amycolatum


organism_name: Staphylococcus hominis


asm_submitter: The University of Tokyo

organism_name: Geomonas diazotrophica


organism_name: Geomonas azotofigens


organism_name: Staphylococcus epidermidis


organism_name: Escherichia sp. S85_ASV_4


excluded_from_refseq: fragmented assembly

organism_name: Escherichia sp. S69_ASV_4


asm_submitter: Universita Degli Studi di Firenze

organism_name: Psychrobacter sp. TAE2020


organism_name: Citrobacter sp. S55_ASV_140


organism_name: Pluralibacter sp. S54_ASV_43


organism_name: Citrobacter sp. S46_ASV_140


excluded_from_refseq: genus undefined

organism_name: Enterobacteriaceae bacterium S5_ASV_15


organism_name: Enterobacteriaceae bacterium S29_ASV_15


organism_name: Citrobacter sp. S44_ASV_140


organism_name: Enterobacteriaceae bacterium S32_ASV_15


organism_name: Enterobacteriaceae bacterium S22_ASV_15


organism_name: Escherichia sp. S2_ASV_4


organism_name: Enterococcus sp. S183_ASV_20


organism_name: Enterococcus sp. S181_ASV_20


organism_name: Enterobacteriaceae bacterium S18_ASV_15


organism_name: Enterococcus sp. S177_ASV_20


organism_name: Enterococcus sp. S173_ASV_20


organism_name: Enterococcus sp. S171_ASV_20


organism_name: Enterococcus sp. S163_ASV_20


organism_name: Enterococcus sp. S165_ASV_20


organism_name: Enterococcus sp. S161_ASV_20


organism_name: Enterococcus sp. S159_ASV_20


organism_name: Enterococcus sp. S149_ASV_20


organism_name: Enterococcus sp. S153_ASV_20


organism_name: Enterococcus sp. S157_ASV_20


organism_name: Enterococcus sp. S145_ASV_20


organism_name: Enterococcus sp. S133_ASV_20


organism_name: Enterococcus sp. S131_ASV_20


organism_name: Enterococcus sp. S141_ASV_20


organism_name: Enterococcus sp. S129_ASV_20


organism_name: Enterococcus sp. S125_ASV_20


organism_name: Enterococcus sp. S123_ASV_20


organism_name: Enterococcus sp. S113_ASV_20


organism_name: Enterococcus sp. S117_ASV_20


organism_name: Enterococcus sp. S115_ASV_20


organism_name: Enterococcus sp. S105_ASV_20


organism_name: Enterococcus sp. S109_ASV_20


asm_submitter: The University of Texas at Austin

organism_name: Candidatus Aenigmatarchaeota archaeon


organism_name: Enterococcus sp. S101_ASV_20


organism_name: Pluralibacter sp. S10_ASV_43


asm_submitter: BRAC University

organism_name: Vibrio cholerae


asm_submitter: University of South Australia

organism_name: Pseudomonas aeruginosa


asm_submitter: University of Sao Paulo

organism_name: Klebsiella pneumoniae


asm_submitter: CDC

excluded_from_refseq: from large multi-isolate project

organism_name: Salmonella enterica


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


asm_submitter: FDA Center for Food Safety and Applied Nutrition

organism_name: Escherichia coli


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: National Center for Biotechnology Information


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Uganda


isolate: bacteria


organism_name: Staphylococcus aureus


organism_name: Citrobacter freundii


organism_name: Enterococcus faecalis


organism_name: Klebsiella oxytoca


organism_name: Enterococcus faecium


organism_name: Clostridioides difficile


asm_submitter: CSIR-IHBT PALAMPUR

organism_name: Chryseobacterium sp. PCH239


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Salmonella enterica subsp. enterica serovar Adelaide


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica


asm_submitter: Public Health England


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Kedougou


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


organism_name: Salmonella enterica subsp. enterica serovar Hessarek


asm_submitter: Health Protection Agency


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Listeria monocytogenes


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Clostridioides difficile


asm_submitter: UFSCar

infraspecific_name: strain=IBSBF 2867

organism_name: Streptomyces brasiliscabiei


asm_submitter: Faculty of Pharmacy, Belgrade University

organism_name: Acinetobacter baumannii


excluded_from_refseq: from large multi-isolate project; genome length too large


asm_submitter: University of Maryland College Park

organism_name: Vibrio cholerae O1


excluded_from_refseq: contaminated; fragmented assembly


asm_submitter: Public Health Agency of Canada

organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Typhi


organism_name: Salmonella enterica


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Enterococcus faecium


organism_name: Salmonella enterica subsp. enterica serovar Thompson


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Berta


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Muenster


organism_name: Clostridioides difficile


organism_name: Shigella flexneri


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


asm_submitter: FDA/CFSAN


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Derby


asm_submitter: USDA FSIS


asm_submitter: Center for Food Safety and Applied Nutrition


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: CDC

organism_name: Shigella sonnei


organism_name: Listeria monocytogenes


isolate: Clostridioides difficile


excluded_from_refseq: contaminated; from large multi-isolate project


asm_submitter: Centers for Disease Control and Prevention


organism_name: Campylobacter coli


infraspecific_name: strain=BAA1382 P1mutant32-3


isolate: Digestate


organism_name: Campylobacter upsaliensis


isolate: Manure


infraspecific_name: strain=Clostridioides

isolate: H patient


isolate: A environment


infraspecific_name: strain=700057 Parent2


infraspecific_name: strain=BAA1382 P1mutant32-8


isolate: B environment


isolate: K patient


infraspecific_name: strain=BAA1382 P1mutant16-6


infraspecific_name: strain=BAA1382 Parent1


infraspecific_name: strain=700057 P2mutant16-2


isolate: G patient


isolate: E patient


isolate: ATCC_strain 4118


asm_submitter: FDA Center for Food Safety and Applied Nutrition


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


organism_name: Salmonella enterica subsp. enterica serovar Thompson


asm_submitter: US Food and Drug Administration


isolate: Whole organism


asm_submitter: FDA


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Stanley


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Panama


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Wien


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Chester


asm_submitter: National Center for Biotechnology Information

organism_name: Clostridioides difficile


organism_name: Salmonella enterica subsp. enterica serovar Typhi


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Virchow


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Adelaide


organism_name: Salmonella enterica subsp. enterica serovar Worthington


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Thompson


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Chailey


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Clostridioides difficile


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


infraspecific_name: strain=CVM N20C001


infraspecific_name: strain=CVM N20C032


infraspecific_name: strain=CVM N20C082


infraspecific_name: strain=CVM N20C137


infraspecific_name: strain=CVM N20C203

organism_name: Campylobacter coli


infraspecific_name: strain=CVM N20C081


infraspecific_name: strain=CVM N20C069


infraspecific_name: strain=CVM N20C031


infraspecific_name: strain=CVM N20C030


infraspecific_name: strain=CVM N20C121


infraspecific_name: strain=CVM N20C068


infraspecific_name: strain=CVM N20C070


asm_submitter: Center for Industrialization of Agricultural and Livestock Microorganisms

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

infraspecific_name: strain=CACC 834

organism_name: Heyndrickxia coagulans


asm_submitter: Jiangxi Normal University

organism_name: Klebsiella ornithinolytica


asm_submitter: Shin's Lab

infraspecific_name: strain=DSM 23020

organism_name: Paenibacillus sophorae


organism_name: Proteus mirabilis


organism_name: Pseudomonas aeruginosa


organism_name: Enterobacter sichuanensis


asm_submitter: Universidad Cientifica del Sur

organism_name: Streptomyces sp. PAM3C


annotation_name: Annotation submitted by Animal and Plant Quarantine Agency

annotation_provider: Animal and Plant Quarantine Agency

asm_submitter: Animal and Plant Quarantine Agency


asm_submitter: Southern Medical University

organism_name: Escherichia coli


asm_submitter: University of Kentucky


asm_submitter: Wenzhou Medical University

organism_name: Serratia ureilytica


asm_submitter: South China Agricultural University


asm_submitter: Korea University

organism_name: Bacillus sp. NP247


asm_submitter: Health Canada


asm_submitter: The Federal Research Centre "Fundamentals of Biotechnology" of the Russian Academy of Sciences

infraspecific_name: strain=F

organism_name: Lacticaseibacillus rhamnosus


organism_name: Streptococcus thermophilus


organism_name: Limosilactobacillus reuteri


organism_name: Escherichia coli O157:H7


organism_name: Lacticaseibacillus paracasei


organism_name: Lactobacillus helveticus


excluded_from_refseq: many frameshifted proteins

organism_name: Lactobacillus delbrueckii


infraspecific_name: strain=ABK


excluded_from_refseq: contaminated; many frameshifted proteins

infraspecific_name: strain=dlA

organism_name: Lactococcus lactis


asm_submitter: University Sultan Zainal Abidin

organism_name: Staphylococcus aureus


asm_submitter: Chulalongkorn University

infraspecific_name: strain=LMG 24826

organism_name: Allobacillus halotolerans


asm_submitter: Madurai Kamaraj University


organism_name: Mammaliicoccus sciuri


asm_submitter: Korea Polar Research Institute

infraspecific_name: strain=PAMC 29296

organism_name: Hymenobacter siberiensis


infraspecific_name: strain=PAMC 29290


infraspecific_name: strain=PAMC 29294


asm_submitter: University of Modena and Reggio Emilia

organism_name: Clostridium tertium


organism_name: Mammaliicoccus lentus


organism_name: Staphylococcus xylosus


asm_submitter: Public Health Agency of Canada

organism_name: Salmonella enterica subsp. houtenae serovar 50:z4,z23:-


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Typhi


asm_submitter: National Center for Biotechnology Information

organism_name: Clostridioides difficile


asm_submitter: Health Protection Agency

organism_name: Escherichia coli


asm_submitter: Public Health England


organism_name: Salmonella enterica subsp. enterica serovar Paratyphi A


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


asm_submitter: CDC

organism_name: Shigella sonnei


organism_name: Salmonella enterica


asm_submitter: Jiangxi academy of agricultural sciences


organism_name: Pasteurella sp. XG20


annotation_name: Annotation submitted by USDA, ARS, WRRC

annotation_provider: USDA, ARS, WRRC

asm_submitter: USDA, ARS, WRRC

organism_name: Campylobacter novaezeelandiae


asm_submitter: Yunnan Academy of Tobacco Agriculture Science

organism_name: Pseudomonas lijiangensis


asm_submitter: University Hospital Bonn

infraspecific_name: strain=SG511 Berlin

organism_name: Staphylococcus aureus


asm_submitter: University of Kentucky

organism_name: Listeria monocytogenes


asm_submitter: Sun Yat-sen University

excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Patescibacteria group bacterium


organism_name: Planctomycetota bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Pseudomonadota bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Acidobacteriota bacterium


organism_name: Sphingomonadales bacterium


organism_name: Bdellovibrionales bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Burkholderiales bacterium


organism_name: Chloroflexota bacterium


organism_name: Rhodospirillales bacterium


organism_name: Rickettsiales bacterium


organism_name: Actinomycetales bacterium


organism_name: Gemmatimonadota bacterium


organism_name: Cyanobacteria bacterium REEB498


organism_name: Cyanobacteria bacterium REEB494


organism_name: Bacteroidota bacterium


organism_name: Patescibacteria group bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Betaproteobacteria bacterium


organism_name: Paenibacillaceae bacterium


organism_name: Acidobacteriota bacterium


organism_name: Lysobacteraceae bacterium


organism_name: Bdellovibrionales bacterium


organism_name: Planctomycetota bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Burkholderiales bacterium


organism_name: Cyanobacteria bacterium REEB459


organism_name: Gammaproteobacteria bacterium


organism_name: Actinomycetales bacterium


organism_name: Rickettsiales bacterium


organism_name: Cyanobacteria bacterium REEB446


organism_name: Cyanobacteria bacterium REEB444


organism_name: Bacteroidota bacterium


organism_name: Patescibacteria group bacterium


organism_name: Pseudomonadota bacterium


organism_name: Betaproteobacteria bacterium


organism_name: Myxococcales bacterium


organism_name: Chloroflexota bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: bacterium


organism_name: Planctomycetota bacterium


organism_name: Lysobacteraceae bacterium


organism_name: Acidobacteriota bacterium


organism_name: Cyanobacteria bacterium REEB417


organism_name: Alphaproteobacteria bacterium


organism_name: Actinomycetales bacterium


organism_name: Sphingomonadales bacterium


organism_name: Burkholderiales bacterium


asm_submitter: Institute of Bioinformatics and Applied Biotechnology

infraspecific_name: strain=JURBA-X

organism_name: Priestia filamentosa


organism_name: Gammaproteobacteria bacterium


organism_name: Rhodospirillales bacterium


organism_name: Pseudomonadota bacterium


organism_name: Nitrospirota bacterium


organism_name: Patescibacteria group bacterium


organism_name: Natronospirales bacterium


organism_name: Verrucomicrobiota bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Bradyrhizobium sp.


organism_name: Cyanobacteria bacterium REEB67


organism_name: Betaproteobacteria bacterium


organism_name: Cyanobacteria bacterium REEB65


organism_name: Lysobacteraceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Chloroflexota bacterium


organism_name: Escherichia coli


asm_submitter: Zhejiang University

organism_name: Proteus mirabilis


asm_submitter: CIRAD

excluded_from_refseq: derived from metagenome

organism_name: Xanthomonas citri pv. citri


organism_name: Riemerella anatipestifer


asm_submitter: CHU Grenoble Alpes

organism_name: Francisella salimarina


asm_submitter: University of Calgary

excluded_from_refseq: unverified source organism; many frameshifted proteins

organism_name: Pseudoalteromonas shioyasakiensis


organism_name: Ruegeria pomeroyi


organism_name: Marinobacter adhaerens


organism_name: Stutzerimonas zhaodongensis


asm_submitter: University of Queensland


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Ituri


organism_name: Salmonella enterica subsp. enterica serovar Bredeney


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Weltevreden


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


organism_name: Salmonella enterica subsp. enterica serovar Abaetetuba


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: Washington State Department of Agriculture GenomeTrakr submission group

organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Poona


organism_name: Salmonella enterica


asm_submitter: National Center for Biotechnology Information

organism_name: Clostridioides difficile


asm_submitter: Microbiological Diagnostics Unit

organism_name: Salmonella enterica subsp. enterica


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


asm_submitter: CDC


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Virchow


asm_submitter: Health Protection Agency


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


organism_name: Citrobacter koseri


organism_name: Salmonella enterica subsp. enterica serovar Kiambu


organism_name: Campylobacter coli


organism_name: Shigella flexneri


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Escherichia albertii


asm_submitter: Public Health Agency of Canada

organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: FDA Center for Food Safety and Applied Nutrition


asm_submitter: FDA


organism_name: Salmonella enterica subsp. enterica serovar Paratyphi B var. L(+) tartrate +


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Stanley


organism_name: Salmonella enterica subsp. enterica serovar Panama


organism_name: Salmonella enterica subsp. enterica serovar Ealing


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


organism_name: Salmonella enterica subsp. enterica serovar Indiana


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Stanleyville


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Typhi


organism_name: Salmonella enterica subsp. enterica serovar Tennessee


organism_name: Salmonella enterica subsp. enterica serovar Thompson


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Javiana


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Oranienburg


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-