asm_submitter: University of Illinois at Urbana-Champaign

assembly_level: Contig

assembly_type: haploid

excluded_from_refseq: derived from metagenome; genus undefined

genome_rep: Full

group: bacteria

organism_name: Patescibacteria group bacterium

release_type: Major

version_status: latest


assembly_level: Scaffold


organism_name: Candidatus Omnitrophota bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined


organism_name: Myxococcota bacterium


organism_name: Fidelibacterota bacterium


organism_name: Candidatus Latescibacterota bacterium


organism_name: Candidatus Zhuqueibacterota bacterium


organism_name: Candidatus Hydrogenedentota bacterium


organism_name: Candidatus Goldiibacteriota bacterium


organism_name: Fusobacteriota bacterium


organism_name: Bacillota bacterium


organism_name: Fibrobacterota bacterium


organism_name: Candidatus Fermentibacterota bacterium


organism_name: Elusimicrobiota bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Candidatus Babelota bacterium


organism_name: Cyanobacteriota bacterium


organism_name: Candidatus Cloacimonadota bacterium


organism_name: Chloroflexota bacterium


excluded_from_refseq: contaminated; derived from metagenome; genus undefined


organism_name: Campylobacterota bacterium


organism_name: Caldisericales bacterium


organism_name: Candidatus Atribacteria bacterium


organism_name: Bdellovibrionales bacterium


organism_name: Bacteroidota bacterium


organism_name: Armatimonadota bacterium


organism_name: Acidobacteriota bacterium


group: archaea

organism_name: Thermoproteota archaeon


organism_name: Nanobdellota archaeon


organism_name: Thermoplasmatota archaeon


organism_name: Methanobacteriota archaeon


excluded_from_refseq: derived from metagenome

organism_name: Methanothrix sp.


organism_name: archaeon


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Methanospirillum sp.


organism_name: Methanoregula sp.


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Methanoculleus sp.


organism_name: Pseudomonadota bacterium


organism_name: Spirochaetota bacterium


organism_name: bacterium


organism_name: Candidatus Omnitrophota bacterium


organism_name: Elusimicrobiota bacterium


organism_name: Patescibacteria group bacterium


organism_name: Bacteroidota bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Acidobacteriota bacterium


organism_name: Chloroflexota bacterium


organism_name: Caldisericota bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Candidatus Hydrogenedentota bacterium


organism_name: Bdellovibrionales bacterium


organism_name: Myxococcota bacterium


organism_name: Planctomycetota bacterium


organism_name: Methanoregula sp.


organism_name: Pseudomonadota bacterium


organism_name: Fibrobacterota bacterium


organism_name: Gemmatimonadota bacterium


organism_name: Candidatus Omnitrophota bacterium


organism_name: Spirochaetota bacterium


organism_name: Patescibacteria group bacterium


organism_name: Methanolinea sp.


organism_name: Bacillota bacterium


organism_name: Bacteroidota bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Methanobacteriota archaeon


organism_name: Chloroflexota bacterium


organism_name: Candidatus Bipolaricaulota bacterium


organism_name: Caldisericales bacterium


organism_name: Campylobacterota bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Candidatus Rifleibacteriota bacterium


organism_name: bacterium


organism_name: Candidatus Zhuqueibacterota bacterium


organism_name: Candidatus Cloacimonadota bacterium


organism_name: Planctomycetota bacterium


organism_name: Acidobacteriota bacterium


organism_name: Pseudomonadota bacterium


organism_name: Methanoregula sp.


organism_name: Candidatus Auribacterota bacterium


organism_name: Bacteroidota bacterium


asm_submitter: The University of Queensland

excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Lactococcus garvieae


asm_submitter: DOE Joint Genome Institute

organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Candidatus Enterococcus leclercqii


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Pseudomonas aeruginosa


organism_name: Klebsiella oxytoca


organism_name: Enterobacteriaceae bacterium


organism_name: Enterococcus sp.

paired_asm_comp: identical


organism_name: Pseudomonas qingdaonensis


organism_name: Klebsiella aerogenes


organism_name: Pseudomonas sp.


organism_name: Galactobacter sp.


organism_name: Chryseobacterium sp.


organism_name: Brevibacterium sp.


organism_name: Prescottella equi


organism_name: Corynebacterium sp.


organism_name: Brevundimonas sp.


organism_name: Sphingobacterium sp.


organism_name: Pediococcus sp.


organism_name: Enterobacter oligotrophicus


organism_name: Weissella cibaria


organism_name: Spiroplasma sp.


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Enterococcus faecalis


organism_name: Lactococcus taiwanensis


organism_name: Enterobacteriaceae bacterium


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Mixta tenebrionis


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly


asm_submitter: Nanyang Technological University

organism_name: Sulfurimonas sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genus undefined

organism_name: Kangiellaceae bacterium


organism_name: Marinosulfonomonas sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Sulfurovum sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Ghiorsea sp.


organism_name: Mycoplasmatota bacterium


organism_name: Pseudodesulfovibrio sp.


organism_name: Desulfobacteraceae bacterium


organism_name: Desulfocapsa sp.


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: Shanghai Ocean University

organism_name: Lactiplantibacillus plantarum


asm_submitter: Georgia Institute of Technology

organism_name: Blautia sp.


organism_name: Actinomycetes bacterium


organism_name: Bifidobacterium longum


organism_name: Roseburia intestinalis


organism_name: Bacteroides stercoris


organism_name: Lachnospiraceae bacterium


organism_name: Mediterraneibacter gnavus


organism_name: Parabacteroides distasonis


organism_name: Escherichia coli


organism_name: Prevotella corporis


organism_name: Phocaeicola dorei


organism_name: Bacteroides fragilis


organism_name: Bacteroides ovatus


organism_name: Akkermansia muciniphila


organism_name: Bifidobacterium bifidum


organism_name: [Ruminococcus] lactaris


organism_name: Eubacteriales bacterium


organism_name: Erysipelotrichales bacterium


organism_name: Blautia sp.


organism_name: Bifidobacterium longum


organism_name: Bifidobacterium breve


excluded_from_refseq: contaminated; unverified source organism; derived from metagenome; genome length too large


organism_name: Oscillospiraceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Veillonella sp.


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Bacteroides caccae


organism_name: Escherichia coli


organism_name: Mediterraneibacter gnavus


organism_name: Agathobacter rectalis


organism_name: Phocaeicola vulgatus


organism_name: Klebsiella pneumoniae


organism_name: Collinsella sp.


organism_name: Bacteroides sp.


organism_name: Bifidobacterium bifidum


organism_name: Bacteroides fragilis


organism_name: Thomasclavelia ramosa


organism_name: Bacteroides ovatus


organism_name: Faecalibacterium prausnitzii


organism_name: Bifidobacterium longum


organism_name: Bacteroides uniformis


organism_name: Bacteroides thetaiotaomicron


organism_name: Lachnospiraceae bacterium


organism_name: Parabacteroides distasonis


organism_name: Escherichia coli


organism_name: Mediterraneibacter gnavus


organism_name: Acidaminococcus intestini


organism_name: Veillonella parvula


organism_name: Bifidobacterium adolescentis


organism_name: Flavonifractor plautii


organism_name: Eubacterium sp.


organism_name: Oscillospiraceae bacterium


organism_name: Bifidobacterium bifidum


organism_name: Bifidobacterium breve


organism_name: Klebsiella pneumoniae


organism_name: Roseburia intestinalis


organism_name: Akkermansia muciniphila


organism_name: Bifidobacterium angulatum


organism_name: Bacteroides uniformis


organism_name: Lachnospiraceae bacterium


organism_name: Enterobacter asburiae


organism_name: Escherichia coli


organism_name: Phocaeicola vulgatus


organism_name: Veillonella seminalis


organism_name: Enterococcaceae bacterium


organism_name: Bifidobacterium longum


organism_name: Faecalibacterium prausnitzii


organism_name: Bacteroides caccae


organism_name: Veillonella sp.


organism_name: Megasphaera sp.


organism_name: Bifidobacterium bifidum


organism_name: Parabacteroides distasonis


organism_name: Oscillospiraceae bacterium


organism_name: Collinsella sp.


organism_name: Roseburia sp.


organism_name: Bacteroides uniformis


organism_name: Lachnospiraceae bacterium


organism_name: Lactococcus lactis


organism_name: Akkermansia muciniphila


organism_name: Phascolarctobacterium succinatutens


organism_name: Prevotella sp.


organism_name: Roseburia inulinivorans


organism_name: Streptococcaceae bacterium


organism_name: Streptococcus lutetiensis


organism_name: Bacteroides ovatus


organism_name: Escherichia coli


organism_name: Phocaeicola dorei


organism_name: Bacteroides fragilis


organism_name: Faecalibacterium prausnitzii


organism_name: Megamonas sp.


organism_name: Oscillospiraceae bacterium


organism_name: Barnesiella sp.


organism_name: Agathobacter rectalis


organism_name: Dialister sp.


excluded_from_refseq: contaminated; unverified source organism; derived from metagenome

organism_name: Lachnobacterium sp.


organism_name: Segatella copri


organism_name: Bacteroides thetaiotaomicron


organism_name: Bacteroides sp.


organism_name: Prevotella sp.


organism_name: Veillonella sp.


organism_name: Phocaeicola vulgatus


organism_name: Bifidobacterium longum


organism_name: Escherichia coli


organism_name: Bifidobacterium catenulatum


organism_name: Collinsella aerofaciens


organism_name: Bacteroides fragilis


organism_name: Mycoplasmataceae bacterium


organism_name: Faecalibacterium prausnitzii


organism_name: Eubacterium sp.


organism_name: Phocaeicola coprocola


organism_name: Megamonas sp.


organism_name: Bacteroides stercoris


organism_name: Bifidobacterium bifidum


organism_name: Streptococcaceae bacterium


organism_name: Eubacteriales bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Anaerostipes sp.


organism_name: Blautia sp.


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Prevotellaceae bacterium


organism_name: Prevotella sp.


organism_name: Succinatimonas sp.


organism_name: Dialister sp.


organism_name: Bacteroidales bacterium


organism_name: Spirochaetota bacterium


organism_name: Escherichia coli


organism_name: Alistipes sp.


organism_name: Lactococcus garvieae


organism_name: Clostridium sp.


organism_name: Segatella copri


organism_name: Mycoplasmataceae bacterium


organism_name: Erysipelotrichales bacterium


organism_name: Bacillota bacterium


organism_name: Lachnospira eligens


organism_name: Brachyspira pilosicoli


organism_name: Faecalibacterium prausnitzii


organism_name: Faecalibacterium sp.


organism_name: Prevotella sp.


organism_name: Mollicutes bacterium


organism_name: Agathobacter rectalis


organism_name: Phascolarctobacterium sp.


organism_name: Oscillospiraceae bacterium


organism_name: Succinatimonas sp.


organism_name: Bifidobacterium longum


organism_name: Veillonella sp.


organism_name: Bifidobacterium catenulatum


organism_name: Escherichia coli


organism_name: Bacteroidales bacterium


organism_name: Bacteroides fragilis


organism_name: Eubacterium sp.


organism_name: Alistipes putredinis


organism_name: Megasphaera sp.


organism_name: Phocaeicola vulgatus


organism_name: Bacteroides stercoris


organism_name: Phocaeicola massiliensis


organism_name: Bacteroides uniformis


organism_name: Clostridium sp.


organism_name: Bacteroides ovatus


organism_name: Eubacteriales bacterium


organism_name: Faecalibacterium prausnitzii


organism_name: Alistipes sp.


organism_name: Prevotella sp.


organism_name: Parabacteroides distasonis


organism_name: Lachnobacterium sp.


organism_name: Bacteroides xylanisolvens


organism_name: Oscillospiraceae bacterium


organism_name: Ruminococcus sp.


organism_name: Leyella stercorea


organism_name: Rikenellaceae bacterium


organism_name: Phocaeicola vulgatus


organism_name: Dialister sp.


organism_name: Bacteroides stercoris


organism_name: Segatella copri


organism_name: Lachnospiraceae bacterium


organism_name: Anaerostipes sp.


organism_name: Agathobacter rectalis


organism_name: Bacteroides fragilis


organism_name: Anaerotruncus sp.


organism_name: Bacteroides ovatus


organism_name: Bacteroides uniformis


organism_name: Faecalibacterium prausnitzii


organism_name: Akkermansia muciniphila


organism_name: Roseburia sp.


organism_name: Oscillospiraceae bacterium


organism_name: Bacteroides thetaiotaomicron


organism_name: Bacteroidota bacterium


organism_name: Eubacteriales bacterium


organism_name: Phocaeicola dorei


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Parabacteroides merdae


organism_name: Bacteroides caccae


organism_name: Bacteroides stercoris


organism_name: Acidaminococcus intestini


organism_name: Alistipes sp.


excluded_from_refseq: contaminated; derived from metagenome; genome length too large

organism_name: Paraprevotella clara


organism_name: Bacteroides ovatus


organism_name: Bacteroides uniformis


organism_name: Alistipes putredinis


organism_name: Lachnospiraceae bacterium


organism_name: Clostridiales bacterium


organism_name: Parabacteroides distasonis


organism_name: Megasphaera sp.


organism_name: Prevotella sp.


organism_name: Phocaeicola vulgatus


organism_name: Escherichia coli


organism_name: Bifidobacterium adolescentis


organism_name: Bifidobacterium angulatum


organism_name: Collinsella sp.


organism_name: Bifidobacterium longum


organism_name: Bifidobacterium bifidum


organism_name: Dorea longicatena


excluded_from_refseq: contaminated; unverified source organism; derived from metagenome; fragmented assembly

organism_name: Lachnobacterium sp.


organism_name: Bifidobacterium breve


organism_name: Bacteroides fragilis


organism_name: Klebsiella pneumoniae


organism_name: Lachnospiraceae bacterium


organism_name: Clostridium sp.


organism_name: Veillonella sp.


organism_name: Bacteroides uniformis


organism_name: Mediterraneibacter gnavus


organism_name: Eggerthella lenta


organism_name: Bacteroides caccae


organism_name: Bacteroides ovatus


organism_name: Enterobacter roggenkampii


organism_name: Bifidobacterium adolescentis


organism_name: Collinsella sp.


organism_name: Bacteroidales bacterium


organism_name: Prevotella sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Bifidobacterium bifidum


organism_name: Oscillospiraceae bacterium


organism_name: Bacillota bacterium


organism_name: Ruminococcus sp.


organism_name: Erysipelotrichaceae bacterium


organism_name: Dialister sp.


organism_name: Agathobacter rectalis


organism_name: Parabacteroides merdae


organism_name: Leyella stercorea


organism_name: Brachyspira pilosicoli


organism_name: Segatella copri


organism_name: Anaerotruncus sp.


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; genome length too small


organism_name: Barnesiella sp.


organism_name: Bacteroides fragilis


excluded_from_refseq: derived from metagenome; genus undefined


organism_name: Veillonella seminalis


organism_name: Bifidobacterium catenulatum


organism_name: bacterium


organism_name: Veillonella sp.


organism_name: Akkermansia sp.


organism_name: Prevotella sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Veillonellaceae bacterium


organism_name: Bifidobacterium longum


organism_name: Bacteroides thetaiotaomicron


organism_name: Agathobacter rectalis


organism_name: Catenibacterium sp.


organism_name: Dialister sp.


organism_name: Bifidobacterium breve


organism_name: Bifidobacterium bifidum


organism_name: Alistipes putredinis


organism_name: Bacteroides caccae


organism_name: Collinsella aerofaciens


organism_name: Bacteroides fragilis


organism_name: Bifidobacterium catenulatum


organism_name: Escherichia coli


organism_name: Faecalibacterium prausnitzii


organism_name: Mediterraneibacter gnavus


organism_name: Veillonella sp.


excluded_from_refseq: contaminated; derived from metagenome; genus undefined

organism_name: Acidaminococcaceae bacterium


excluded_from_refseq: derived from metagenome

organism_name: Prevotella sp.


organism_name: Clostridiales bacterium


organism_name: Segatella copri


organism_name: Prevotellaceae bacterium


organism_name: Agathobacter rectalis


organism_name: Leyella stercorea


organism_name: Dialister sp.


organism_name: Oscillospiraceae bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome


organism_name: Streptococcaceae bacterium


organism_name: Clostridium sp.


organism_name: Bifidobacterium longum


organism_name: Streptococcus salivarius


organism_name: Anaerostipes sp.


organism_name: Butyricicoccus sp.


organism_name: Bifidobacterium sp.


organism_name: Campylobacter sp.


organism_name: Bifidobacterium breve


organism_name: Veillonella sp.


organism_name: Bacteroides fragilis


organism_name: Bacteroides stercoris


organism_name: Barnesiella sp.


organism_name: Streptococcus gallolyticus


organism_name: Phocaeicola vulgatus


organism_name: Parabacteroides merdae


organism_name: Bifidobacterium catenulatum


organism_name: Faecalibacterium prausnitzii


organism_name: Dialister sp.


organism_name: Segatella copri


organism_name: Prevotella sp.


excluded_from_refseq: derived from metagenome; fragmented assembly


organism_name: Clostridiales bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Leyella stercorea


organism_name: Bacteroidales bacterium


organism_name: Bifidobacterium longum


organism_name: Escherichia coli


organism_name: Akkermansia muciniphila


organism_name: Bacteroides caccae


excluded_from_refseq: derived from metagenome; genome length too small


organism_name: Megamonas sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small


organism_name: Bifidobacterium breve


organism_name: Collinsella aerofaciens


organism_name: Succinatimonas sp.


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Bacteroides fragilis


organism_name: Mediterraneibacter gnavus


organism_name: Phocaeicola vulgatus


organism_name: Streptococcus sp.


organism_name: Prevotella sp.


organism_name: Bacteroides stercoris


organism_name: Bifidobacterium bifidum


organism_name: Parabacteroides distasonis


organism_name: Faecalibacterium prausnitzii


organism_name: Veillonella sp.


organism_name: Olsenella uli


organism_name: Bifidobacterium longum


organism_name: Streptococcus thermophilus


organism_name: Escherichia coli


organism_name: Anaerostipes sp.


organism_name: Bifidobacterium catenulatum


excluded_from_refseq: contaminated; derived from metagenome


organism_name: Megasphaera sp.


organism_name: Bacteroides fragilis


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Ligilactobacillus ruminis


organism_name: Prevotellaceae bacterium


organism_name: Streptococcus sp.


organism_name: Prevotella sp.


organism_name: Streptococcus lutetiensis


organism_name: Bifidobacterium bifidum


organism_name: Bifidobacterium breve


organism_name: Faecalibacterium prausnitzii


organism_name: Megamonas sp.


organism_name: Haemophilus parainfluenzae


excluded_from_refseq: unverified source organism; derived from metagenome; genome length too small


organism_name: Bacteroidales bacterium


organism_name: Dialister sp.


organism_name: Escherichia coli


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Veillonella sp.


organism_name: Bifidobacterium longum


organism_name: Olsenella uli


organism_name: Bifidobacterium catenulatum


organism_name: Limosilactobacillus mucosae


organism_name: Ligilactobacillus salivarius


organism_name: Streptococcus sp.


organism_name: Lactobacillus gasseri


organism_name: Megasphaera sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genome length too small

organism_name: Agathobacter rectalis


organism_name: Prevotella sp.


organism_name: Phocaeicola vulgatus


organism_name: Akkermansia sp.


organism_name: Bacteroides fragilis


organism_name: Bacteroides thetaiotaomicron


organism_name: Faecalibacterium prausnitzii


organism_name: Escherichia coli


organism_name: Megamonas sp.


organism_name: Alistipes putredinis


organism_name: Parabacteroides merdae


organism_name: Bifidobacterium longum


organism_name: Segatella copri


organism_name: Bacteroides uniformis


organism_name: Bacteroidales bacterium


organism_name: Sutterella sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genus undefined

organism_name: Selenomonadales bacterium


organism_name: Agathobacter rectalis


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Prevotella sp.


organism_name: Klebsiella pneumoniae


organism_name: Akkermansia muciniphila


organism_name: Veillonella sp.


organism_name: Bifidobacterium catenulatum


organism_name: Bacteroides caccae


organism_name: Phocaeicola vulgatus


organism_name: Bifidobacterium bifidum


organism_name: Faecalibacterium sp.


organism_name: Bifidobacterium breve


excluded_from_refseq: contaminated; derived from metagenome; genome length too large

organism_name: Olsenella uli


organism_name: Oscillospiraceae bacterium


organism_name: Bifidobacterium longum


organism_name: Prevotellaceae bacterium


organism_name: Escherichia coli


organism_name: Klebsiella quasipneumoniae


organism_name: Bacteroides fragilis


organism_name: Prevotella sp.


organism_name: Catenibacterium sp.


organism_name: Dialister sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Ligilactobacillus ruminis


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Bacteroides ovatus


organism_name: Bifidobacterium catenulatum


organism_name: Parabacteroides sp.


organism_name: Limosilactobacillus mucosae


organism_name: Mycoplasmataceae bacterium


organism_name: Megamonas sp.


organism_name: Eubacteriales bacterium


organism_name: Bifidobacterium longum


organism_name: Streptococcus salivarius


organism_name: Agathobacter rectalis


organism_name: Lactococcus garvieae


organism_name: Enterococcus hirae


organism_name: Veillonella sp.


organism_name: Akkermansia sp.


organism_name: Parabacteroides merdae


organism_name: Phocaeicola vulgatus


organism_name: Escherichia coli


organism_name: Alistipes putredinis


organism_name: Collinsella sp.


organism_name: Oscillospiraceae bacterium


organism_name: Faecalibacterium prausnitzii


organism_name: Prevotella sp.


organism_name: Leyella stercorea


organism_name: Faecalibacterium sp.


organism_name: Roseburia sp.


organism_name: Bifidobacterium adolescentis


organism_name: Megamonas sp.


organism_name: Bifidobacterium catenulatum


organism_name: Bifidobacterium bifidum


organism_name: Bifidobacterium breve


organism_name: Bacteroides fragilis


organism_name: Parabacteroides merdae


organism_name: Bacteroides ovatus


organism_name: Parabacteroides distasonis


asm_submitter: Colledge of Environmental Sciences and Engineering, Peking University

organism_name: Pseudomonas sp.


organism_name: Lachnospiraceae bacterium


organism_name: Thiobacillus sp.


organism_name: Burkholderiaceae bacterium


organism_name: Paracoccus sp. (in: a-proteobacteria)


organism_name: Enterobacter sp.


organism_name: Rhodocyclaceae bacterium


organism_name: Diaphorobacter sp.


excluded_from_refseq: contaminated; unverified source organism; derived from metagenome


organism_name: Stenotrophomonas sp.


organism_name: Atlantibacter sp.


organism_name: Citrobacter sp.


asm_submitter: Institute of Microbiology, Chinese Academy of Sciences

organism_name: Candidatus Nanohalarchaeota archaeon


organism_name: Candidatus Nanoanaerosalina archaeon


relation_to_type_material: assembly from type material


asm_submitter: University Duisburg-Essen

organism_name: Thermoplasma sp.


organism_name: Slackia heliotrinireducens


organism_name: Candidatus Caldatribacterium sp.


organism_name: Candidatus Paceibacter sp.


organism_name: Azovibrio restrictus


organism_name: Thiomargarita sp.


organism_name: Arcobacter nitrofigilis


organism_name: Sulfurovum sp.


organism_name: Flavobacterium psychrophilum


organism_name: Thiomicrospira cyclica


organism_name: Desulfocapsa sulfexigens


excluded_from_refseq: unverified source organism; derived from metagenome; genome length too large

organism_name: Helicobacter cetorum


excluded_from_refseq: derived from metagenome; genome length too large


organism_name: Anaerolinea thermophila


organism_name: Sulfuricurvum sp.


organism_name: Bdellovibrio sp.


organism_name: Draconibacterium orientale


organism_name: Thiomonas intermedia


organism_name: Candidatus Elulimicrobium sp.


organism_name: Paludibacter propionicigenes


organism_name: Caldithrix sp.


organism_name: Rhodanobacter sp.


excluded_from_refseq: unverified source organism; derived from metagenome; fragmented assembly


organism_name: Ignavibacterium album


organism_name: Thiomargarita sp.


organism_name: Halothiobacillus neapolitanus


organism_name: Melioribacter roseus


organism_name: Flavobacterium psychrophilum


organism_name: Candidatus Altimarinus sp.


organism_name: Acidithiobacillus ferrivorans


organism_name: Phycisphaera mikurensis


organism_name: Prevotella sp.


organism_name: Campylobacter sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Oscillospiraceae bacterium


organism_name: Eshraghiella crossota


organism_name: Prevotellaceae bacterium


organism_name: Escherichia coli


excluded_from_refseq: derived from metagenome

organism_name: Agathobacter rectalis


organism_name: Clostridiales bacterium


organism_name: Phascolarctobacterium sp.


organism_name: Bacteroidales bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Mollicutes bacterium


organism_name: Segatella copri


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome


organism_name: Succinatimonas sp.


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Oscillibacter sp.


organism_name: Akkermansia muciniphila


organism_name: Alistipes putredinis


organism_name: Leyella stercorea


organism_name: Catenibacterium sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Alistipes finegoldii


organism_name: Prevotella sp.


organism_name: Bacteroides fragilis


organism_name: Phascolarctobacterium succinatutens


organism_name: Collinsella sp.


organism_name: Alistipes sp.


organism_name: Lactococcus garvieae


organism_name: Escherichia coli


organism_name: Brachyspira pilosicoli


organism_name: Bacteroidales bacterium


organism_name: Segatella copri


organism_name: Streptococcus sp.


organism_name: Phocaeicola dorei


organism_name: Veillonella sp.


organism_name: Bifidobacterium breve


organism_name: Klebsiella sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Bifidobacterium bifidum


organism_name: Parabacteroides merdae


organism_name: Bifidobacterium sp.


organism_name: Leyella stercorea


organism_name: Dialister sp.


organism_name: Prevotella sp.


organism_name: Succinatimonas sp.


organism_name: Phocaeicola vulgatus


organism_name: Agathobacter rectalis


organism_name: Escherichia coli


organism_name: Bacteroides fragilis


organism_name: Alistipes sp.


organism_name: Olsenella uli


excluded_from_refseq: unverified source organism; derived from metagenome


organism_name: Bifidobacterium longum


organism_name: Oscillospiraceae bacterium


organism_name: Streptococcus salivarius


excluded_from_refseq: derived from metagenome; genome length too small


organism_name: Bacteroides xylanisolvens


organism_name: Eubacteriales bacterium


organism_name: Prevotellaceae bacterium


organism_name: Anaerostipes sp.


organism_name: Segatella copri


organism_name: Faecalibacterium prausnitzii


organism_name: Veillonella sp.


organism_name: Prevotella sp.


organism_name: Haemophilus parainfluenzae


organism_name: Faecalibacterium sp.


organism_name: Escherichia coli


organism_name: Atopobium sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly


organism_name: Bifidobacterium bifidum


organism_name: Bifidobacterium breve


organism_name: Streptococcus thermophilus


organism_name: Bacteroides fragilis


organism_name: Collinsella sp.


organism_name: Megamonas sp.


organism_name: Bacteroides stercoris


organism_name: Ligilactobacillus ruminis


organism_name: Agathobacter rectalis


organism_name: Leyella stercorea


organism_name: Mollicutes bacterium


organism_name: Veillonella sp.


organism_name: Prevotella sp.


excluded_from_refseq: contaminated; derived from metagenome; genus undefined

organism_name: Veillonellales bacterium


organism_name: Phocaeicola vulgatus


organism_name: Bifidobacterium longum


organism_name: Phocaeicola dorei


organism_name: Bifidobacterium catenulatum


organism_name: Bifidobacterium breve


organism_name: Escherichia coli


organism_name: Bacteroides xylanisolvens


organism_name: Bacteroides thetaiotaomicron


organism_name: Bacteroides uniformis


organism_name: Parabacteroides merdae


organism_name: Odoribacter splanchnicus


organism_name: Parabacteroides distasonis


organism_name: Megasphaera sp.


organism_name: Bacteroides fragilis


organism_name: Faecalibacterium prausnitzii


organism_name: Prevotella sp.


organism_name: Megamonas sp.


organism_name: Agathobacter rectalis


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Collinsella aerofaciens


organism_name: Dialister sp.


organism_name: Megasphaera micronuciformis


organism_name: Veillonella seminalis


organism_name: Bifidobacterium breve


organism_name: Phocaeicola dorei


organism_name: Escherichia coli


organism_name: Bacteroides thetaiotaomicron


organism_name: Lachnospiraceae bacterium


organism_name: Veillonella sp.


organism_name: Bifidobacterium longum


organism_name: Phascolarctobacterium sp.


organism_name: Catenibacterium sp.


organism_name: Erysipelotrichales bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Prevotella sp.


organism_name: Campylobacter sp.


organism_name: Olsenella uli


organism_name: Collinsella aerofaciens


organism_name: Bifidobacterium catenulatum


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genus undefined


organism_name: Megamonas sp.


organism_name: Segatella copri


organism_name: Bacteroides ovatus


organism_name: Bacteroides fragilis


organism_name: Faecalibacterium sp.


organism_name: Bifidobacterium bifidum


organism_name: Streptococcaceae bacterium


organism_name: Bifidobacterium breve


organism_name: Parabacteroides merdae


organism_name: Escherichia coli


organism_name: Leyella stercorea


organism_name: Bacteroides uniformis


excluded_from_refseq: contaminated; derived from metagenome; genome length too large

organism_name: Veillonella parvula


organism_name: Faecalibacterium prausnitzii


organism_name: Mediterraneibacter gnavus


organism_name: Bifidobacterium longum


organism_name: Phocaeicola vulgatus


organism_name: Butyricicoccus sp.


organism_name: Parabacteroides distasonis


organism_name: Limosilactobacillus mucosae


organism_name: Veillonella sp.


organism_name: Olsenella uli


organism_name: Bifidobacterium bifidum


organism_name: Ligilactobacillus ruminis


organism_name: Bifidobacterium catenulatum


organism_name: Bacteroidales bacterium


organism_name: Prevotella sp.


organism_name: Prevotellaceae bacterium


organism_name: Thermus sp.


organism_name: Thermodesulfovibrio sp.


organism_name: Slackia sp.


organism_name: Thiobacillus sp.


organism_name: Thermincola sp.


organism_name: Dehalobacter sp.


organism_name: Meiothermus sp.


organism_name: Caulobacter sp.


organism_name: Anaerolinea sp.


organism_name: Hydrogenophaga sp.


organism_name: Hadarchaeum sp. (SeqCode)


organism_name: Sulfurovum sp.


organism_name: Arcobacter nitrofigilis


organism_name: Rikenella microfusus


organism_name: Thiomicrospira cyclica


excluded_from_refseq: contaminated; derived from metagenome; genome length too small

organism_name: Rubrivivax gelatinosus


organism_name: Bdellovibrio sp.


organism_name: Draconibacterium orientale


organism_name: Rhodanobacter sp.


organism_name: Desulfonema limicola


organism_name: Draconibacterium sp.


organism_name: Halothiobacillus neapolitanus


organism_name: Desulfobacca acetoxidans


organism_name: Thiomargarita sp.


organism_name: Desulfatirhabdium butyrativorans


organism_name: Saccharimonas sp. (SeqCode)


organism_name: Syntrophus aciditrophicus


organism_name: Sideroxydans lithotrophicus


organism_name: Paludibacter propionicigenes


excluded_from_refseq: contaminated; unverified source organism; derived from metagenome

organism_name: Edaphobacter aggregans


organism_name: Bifidobacterium longum


organism_name: Escherichia coli


organism_name: Streptococcus sp.


organism_name: Collinsella aerofaciens


organism_name: Megasphaera sp.


organism_name: Bifidobacterium catenulatum


organism_name: Faecalibacterium prausnitzii


organism_name: Dialister sp.


organism_name: Oscillospiraceae bacterium


organism_name: Prevotella sp.


organism_name: Veillonella sp.


organism_name: Megamonas sp.


organism_name: Roseburia sp.


organism_name: Olsenella uli


organism_name: Bacteroidales bacterium


organism_name: Bifidobacterium bifidum


organism_name: Parabacteroides merdae


organism_name: Bifidobacterium breve


organism_name: Phocaeicola vulgatus


organism_name: Bacteroides fragilis


organism_name: Parabacteroides distasonis


organism_name: Bacteroides ovatus


organism_name: Catenibacterium sp.


organism_name: Alistipes sp.


organism_name: Lachnospiraceae bacterium


organism_name: Clostridium sp.


organism_name: Rikenella microfusus


organism_name: Bifidobacterium longum


organism_name: Draconibacterium orientale


organism_name: Veillonella sp.


organism_name: Streptococcus lutetiensis


organism_name: Escherichia coli


organism_name: Segatella copri


organism_name: Olsenella uli


organism_name: Bifidobacterium breve


organism_name: Prevotella sp.


organism_name: Bifidobacterium catenulatum


organism_name: Bacteroides fragilis


organism_name: Phocaeicola vulgatus


organism_name: Bacillota bacterium


organism_name: Barnesiella sp.


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Ligilactobacillus ruminis


organism_name: Phascolarctobacterium succinatutens


organism_name: Bifidobacterium longum


organism_name: Succinatimonas sp.


organism_name: Prevotellaceae bacterium


organism_name: Limosilactobacillus mucosae


organism_name: Agathobacter rectalis


organism_name: Mediterraneibacter gnavus


organism_name: Lachnobacterium sp.


organism_name: Sutterella sp.


organism_name: Prevotella sp.


organism_name: Bifidobacterium catenulatum


organism_name: Olsenella uli


organism_name: Bifidobacterium breve


organism_name: Bacteroides fragilis


organism_name: Streptococcus sp.


organism_name: Phocaeicola vulgatus


organism_name: Segatella copri


organism_name: Dialister sp.


organism_name: Oscillospiraceae bacterium


organism_name: Escherichia coli


organism_name: Megasphaera elsdenii


organism_name: Bifidobacterium bifidum


organism_name: Succinatimonas sp.


organism_name: Alistipes putredinis


organism_name: Bacteroidales bacterium


organism_name: Bifidobacterium sp.


organism_name: Prevotella sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Campylobacter sp.


organism_name: Helicobacter fennelliae


organism_name: Bifidobacterium longum


organism_name: Akkermansia muciniphila


organism_name: Phocaeicola vulgatus


organism_name: Bacteroides sp.


organism_name: Parabacteroides distasonis


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genome length too small

organism_name: Morganella morganii


organism_name: Oscillospiraceae bacterium


organism_name: Segatella copri


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Streptococcus gallolyticus


organism_name: Collinsella sp.


organism_name: Escherichia coli


organism_name: Bacteroides uniformis


excluded_from_refseq: derived from metagenome; genome length too large

organism_name: Olsenella uli


organism_name: Bifidobacterium catenulatum


organism_name: Bifidobacterium bifidum


organism_name: Bifidobacterium breve


organism_name: Veillonella sp.


organism_name: Streptococcus salivarius


organism_name: Dialister sp.


organism_name: Bifidobacterium longum


organism_name: Bacteroides fragilis


organism_name: Collinsella aerofaciens


organism_name: Ligilactobacillus ruminis


organism_name: Parabacteroides distasonis


organism_name: Catenibacterium sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Enterobacter roggenkampii


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Oscillospiraceae bacterium


excluded_from_refseq: derived from metagenome

organism_name: Phocaeicola vulgatus


organism_name: Escherichia coli


organism_name: Bacteroides uniformis


organism_name: Bacteroides thetaiotaomicron


organism_name: Streptococcus sp.


organism_name: Bifidobacterium bifidum


organism_name: Segatella copri


organism_name: Prevotella sp.


organism_name: Dialister sp.


organism_name: Megasphaera sp.


organism_name: Roseburia inulinivorans


organism_name: Bacteroides sp.


organism_name: Olsenella uli


organism_name: Veillonella sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Bifidobacterium longum


organism_name: Bifidobacterium catenulatum


organism_name: Phocaeicola vulgatus


organism_name: Bacteroides ovatus


organism_name: Prevotellaceae bacterium


organism_name: Haemophilus parainfluenzae


organism_name: Akkermansia muciniphila


organism_name: Escherichia coli


organism_name: Leyella stercorea


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Bacteroides fragilis


organism_name: Prevotella sp.


organism_name: Bifidobacterium bifidum


organism_name: Klebsiella pneumoniae


organism_name: Lactococcus garvieae


organism_name: Veillonella sp.


organism_name: Morganella morganii


organism_name: Bifidobacterium longum


organism_name: Streptococcaceae bacterium


organism_name: Streptococcus gallolyticus


organism_name: Oscillibacter sp.


organism_name: Alistipes sp.


organism_name: Roseburia inulinivorans


organism_name: Megamonas sp.


organism_name: Collinsella aerofaciens


organism_name: Faecalibacterium prausnitzii


organism_name: Segatella copri


organism_name: Phascolarctobacterium sp.


organism_name: Streptococcus sp.


organism_name: Prevotella sp.


organism_name: Agathobacter rectalis


organism_name: Catenibacterium sp.


organism_name: Escherichia coli


organism_name: Bacteroidales bacterium


organism_name: Bacteroides ovatus


organism_name: Bifidobacterium catenulatum


organism_name: Bacteroides fragilis


organism_name: Phocaeicola dorei


organism_name: Veillonella sp.


organism_name: Olsenella uli


organism_name: Megasphaera sp.


organism_name: Faecalibacterium sp.


organism_name: Ligilactobacillus ruminis


organism_name: Bifidobacterium longum


organism_name: Segatella copri


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Prevotella sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Bacteroides thetaiotaomicron


organism_name: Klebsiella sp.


organism_name: Escherichia coli


organism_name: Clostridium sp.


organism_name: Bacteroides sp.


organism_name: Eubacterium sp.


organism_name: Roseburia sp.


organism_name: Akkermansia muciniphila


organism_name: Bifidobacterium bifidum


organism_name: Collinsella aerofaciens


organism_name: Veillonella sp.


organism_name: Mollicutes bacterium


organism_name: Alistipes putredinis


organism_name: Bacteroides fragilis


organism_name: Phocaeicola vulgatus


organism_name: Megasphaera sp.


organism_name: Dialister sp.


organism_name: Prevotella sp.


organism_name: Bifidobacterium breve


organism_name: Faecalibacterium prausnitzii


organism_name: Escherichia coli


organism_name: Bifidobacterium catenulatum


organism_name: Bifidobacterium longum


organism_name: Segatella copri


organism_name: Prevotellaceae bacterium


organism_name: Enterococcus sp.


organism_name: Lactococcus garvieae


organism_name: Sarcina ventriculi


organism_name: Mediterraneibacter gnavus


organism_name: Veillonella sp.


organism_name: Limosilactobacillus mucosae


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Streptococcus sp.


organism_name: Veillonella seminalis


organism_name: Parabacteroides distasonis


organism_name: Bacteroidales bacterium


organism_name: Streptococcaceae bacterium


organism_name: Agathobacter rectalis


organism_name: Dialister sp.


organism_name: Prevotella sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Oscillospiraceae bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome


organism_name: Akkermansia muciniphila


organism_name: Alistipes putredinis


organism_name: Succinatimonas sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Megasphaera sp.


organism_name: Segatella copri


organism_name: Streptococcus gallolyticus


organism_name: Escherichia coli


organism_name: Bifidobacterium bifidum


organism_name: Ligilactobacillus ruminis


organism_name: Prevotellaceae bacterium


organism_name: Clostridium sp.


organism_name: Leyella stercorea


organism_name: Roseburia sp.


organism_name: Catenibacterium sp.


organism_name: Bacteroides sp.


organism_name: Prevotella sp.


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Veillonella sp.


organism_name: Bifidobacterium breve


organism_name: Bifidobacterium longum


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Faecalibacterium prausnitzii


organism_name: Bifidobacterium catenulatum


organism_name: Dialister sp.


organism_name: Akkermansia muciniphila


organism_name: Bacteroides fragilis


organism_name: Segatella copri


organism_name: Roseburia inulinivorans


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Phascolarctobacterium sp.


organism_name: Lachnospiraceae bacterium


organism_name: Agathobacter rectalis


organism_name: Parabacteroides merdae


organism_name: Bacteroides ovatus


organism_name: Bacteroides uniformis


organism_name: Collinsella sp.


organism_name: Escherichia coli


organism_name: Prevotella sp.


organism_name: Phocaeicola vulgatus


organism_name: Bifidobacterium longum


organism_name: Collinsella aerofaciens


organism_name: Mycoplasmataceae bacterium


organism_name: Bacteroides fragilis


organism_name: Mollicutes bacterium


organism_name: bacterium


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Akkermansia muciniphila


organism_name: Klebsiella pneumoniae


organism_name: Ligilactobacillus ruminis


organism_name: Erysipelotrichales bacterium


organism_name: Prevotellaceae bacterium


organism_name: Agathobacter rectalis


organism_name: Leyella stercorea


organism_name: Solobacterium sp.


organism_name: Bacteroides uniformis


organism_name: Barnesiella sp.


organism_name: Phocaeicola dorei


organism_name: Olsenella uli


organism_name: Prevotella sp.


organism_name: Eubacteriales bacterium


organism_name: Dialister sp.


organism_name: Butyricimonas sp.


organism_name: Sutterella wadsworthensis


organism_name: Bifidobacterium bifidum


organism_name: Bacteroides fragilis


organism_name: Bacteroides xylanisolvens


organism_name: Escherichia coli


organism_name: Parabacteroides merdae


organism_name: Lachnospiraceae bacterium


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Segatella copri


organism_name: Agathobacter rectalis


organism_name: Succinatimonas sp.


organism_name: Akkermansia muciniphila


organism_name: Bacteroides uniformis


organism_name: Collinsella aerofaciens


organism_name: Bifidobacterium catenulatum


organism_name: Lachnobacterium sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Prevotella sp.


organism_name: Ligilactobacillus ruminis


organism_name: Dialister sp.


organism_name: Bacteroides fragilis


organism_name: Olsenella uli


organism_name: Limosilactobacillus mucosae


organism_name: Bifidobacterium bifidum


organism_name: Mediterraneibacter gnavus


organism_name: Mycoplasmataceae bacterium


organism_name: Bifidobacterium longum


organism_name: Phocaeicola vulgatus


organism_name: Bacteroides caccae


organism_name: Escherichia coli


organism_name: Succinatimonas sp.


organism_name: Bacteroides uniformis


organism_name: Bacteroides ovatus


organism_name: Oscillospiraceae bacterium


organism_name: Prevotella sp.


organism_name: Betaproteobacteria bacterium


organism_name: Veillonella sp.


organism_name: Bifidobacterium catenulatum


organism_name: Bacteroides fragilis


organism_name: Prevotellaceae bacterium


organism_name: Streptococcus lutetiensis


organism_name: Megamonas sp.


organism_name: Collinsella sp.


organism_name: Bacteroides xylanisolvens


organism_name: Ruminococcus sp.


organism_name: Eubacteriales bacterium


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Faecalibacterium sp.


asm_submitter: Sorbonne University

organism_name: Dickeya dianthicola


asm_submitter: Centers for Disease Control and Prevention

excluded_from_refseq: from large multi-isolate project

organism_name: Clostridioides difficile


asm_submitter: Leon University

organism_name: Listeria monocytogenes


asm_submitter: Chungnam National University

organism_name: Micromonospora sp. R77


infraspecific_name: strain=MMS21 TC-5

organism_name: Streptomyces sp. MMS21 TC-5


asm_submitter: Universiti Sains Malaysia

organism_name: Bacillus sp. CCB-MMP212


organism_name: Streptomyces sp. MMS20-AI2-20


asm_submitter: shandong university

organism_name: Brevibacterium sp. ZH18


asm_submitter: Tarim University

infraspecific_name: strain=TRM 75563

organism_name: Streptomyces aheensis

refseq_category: reference genome


asm_submitter: King Abdullah University of Science and Technology

organism_name: Bacillus haynesii


organism_name: Bacillus spizizenii


excluded_from_refseq: fragmented assembly

organism_name: Bacillus vallismortis


organism_name: Bacillus cereus


asm_submitter: National Medicines Institute

organism_name: Klebsiella pneumoniae


excluded_from_refseq: contaminated


excluded_from_refseq: contaminated; fragmented assembly


asm_submitter: UFPR

organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


asm_submitter: The University of Texas at Dallas

assembly_level: Complete Genome

organism_name: Streptococcus oralis


asm_submitter: Erciyes University


organism_name: Streptococcus lutetiensis


organism_name: Roseburia inulinivorans


excluded_from_refseq: contaminated; derived from metagenome; genome length too large

organism_name: Lactococcus garvieae


asm_submitter: Korea Research Institute of bioscience and Biotechnology

excluded_from_refseq: genus undefined

organism_name: Flavobacteriaceae bacterium GSB9


asm_submitter: Georgia Institute of Technology

organism_name: Bifidobacterium catenulatum


organism_name: Escherichia coli


excluded_from_refseq: contaminated; derived from metagenome; genus undefined

organism_name: Streptococcaceae bacterium


organism_name: Faecalibacterium prausnitzii


organism_name: Prevotella sp.


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Lachnobacterium sp.


asm_submitter: Beijing Institute of Microbiology and Epidemiology

organism_name: Enterococcus faecium


asm_submitter: Guangxi University


asm_submitter: Korea University

infraspecific_name: strain=ATCC 33926

organism_name: Neisseria macacae ATCC 33926


infraspecific_name: strain=CIP 81.93

organism_name: Morococcus cerebrosus


asm_submitter: Nanjing agricultural university

organism_name: Comamonas sp. 7D-2evo1


organism_name: Comamonas sp. 7D-2


organism_name: Comamonas sp. 7D-2evo2


organism_name: Acinetobacter indicus


excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Acinetobacter variabilis


asm_submitter: Shanghai Jiao Tong University

infraspecific_name: strain=ATCC 49119

organism_name: Xanthomonas phaseoli pv. phaseoli


asm_submitter: University of Aberdeen

organism_name: Thermoplasmata archaeon


excluded_from_refseq: derived from metagenome; genus undefined


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genus undefined


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined


excluded_from_refseq: derived from metagenome

organism_name: Candidatus Lutacidiplasma silvani


asm_submitter: University of Gothenburg - CCUG

infraspecific_name: strain=CCUG 60055

organism_name: Caulobacter sp. CCUG 60055


asm_submitter: Food Industry Research and Development Institute

infraspecific_name: strain=BCRC 81148


infraspecific_name: strain=BCRC 81150


infraspecific_name: strain=BCRC 81149

organism_name: Faecalibacterium sp. BCRC 81149


asm_submitter: National Institute for Communicable Disease Control and Prevention, China CDC

infraspecific_name: strain=CHPC 1.3453

organism_name: Brevundimonas pishanensis


asm_submitter: Sorbonne University

organism_name: Dickeya dianthicola


asm_submitter: Pirogov Russian National Research Medical University

organism_name: Stenotrophomonas maltophilia


excluded_from_refseq: unverified source organism


asm_submitter: BioPS Co., Ltd.

organism_name: Actinomadura litoris


organism_name: Actinomadura terrae


asm_submitter: Rural Development Administration

organism_name: Weissella cibaria


asm_submitter: Yunnan Agricultural University

organism_name: Xanthomonas oryzae pv. oryzicola


asm_submitter: Massachusetts General Hospital

organism_name: Lactobacillus crispatus


organism_name: Lactobacillus iners


organism_name: Lactobacillus gasseri


organism_name: Lactobacillus jensenii


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small


excluded_from_refseq: derived from metagenome; genome length too small


organism_name: Lactobacillus mulieris


organism_name: Limosilactobacillus vaginalis


excluded_from_refseq: contaminated; derived from metagenome; genome length too small


excluded_from_refseq: derived from metagenome; fragmented assembly


asm_submitter: Ningbo University

organism_name: Pontibacter vulgaris


asm_submitter: the Affiliated Hospital of Southwest Medical University

organism_name: Vibrio cholerae


asm_submitter: Forman Christian College

organism_name: Priestia megaterium


organism_name: Pseudomonas fluorescens


asm_submitter: Beijing Institute of Microbiology and Epidemiology

organism_name: Enterococcus faecalis


organism_name: Pontibacter liquoris


organism_name: Enterococcus faecium


asm_submitter: Xinxiang Medical University

infraspecific_name: strain=CFH 32150

organism_name: Lysobacter sp. CFH 32150


asm_submitter: Yunnan agriculture university

organism_name: Escherichia coli


organism_name: Bacillus pumilus


asm_submitter: Universidade Federal de Sao Paulo


asm_submitter: Inner Mongolia University

organism_name: Sphingobium sp. BYY-5


asm_submitter: Montana State University

organism_name: Burkholderiales bacterium


organism_name: Candidatus Nitrosopumilus sp.


organism_name: Lentimicrobium sp.


organism_name: Campylobacteraceae bacterium


organism_name: Sulfuricurvum sp.


organism_name: Tibeticola sp.


organism_name: Thiotrichales bacterium


organism_name: Acidobacteriota bacterium


organism_name: Ignisphaera sp.


organism_name: Thermoplasmata archaeon


organism_name: Candidatus Aminicenantota bacterium


organism_name: Caldisericum sp.


organism_name: Thermoprotei archaeon


organism_name: archaeon


organism_name: Nitrososphaerota archaeon


organism_name: Thermofilum sp.


organism_name: Thermodesulfobacterium sp.


organism_name: Sulfolobus sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Thermocrinis sp.


organism_name: Thermoproteus sp.


organism_name: Acidilobus sp.


organism_name: Pyrobaculum sp.


organism_name: Thermogladius sp.


organism_name: Desulfurococcaceae archaeon


asm_submitter: Chinese PLA General Hospital

organism_name: Klebsiella variicola


asm_submitter: University of New Hampshire

organism_name: Georgenia sp. TF02-10


asm_submitter: Northwest A&F University

infraspecific_name: strain=DSM 40587

organism_name: Streptomyces mobaraensis

relation_to_type_material: assembly from heterotypic synonym type material


asm_submitter: Ji Mei University

organism_name: Aeromonas hydrophila


organism_name: Acinetobacter baumannii


organism_name: Klebsiella aerogenes


asm_submitter: University of Bern

organism_name: Klebsiella pneumoniae


organism_name: Escherichia coli


asm_submitter: ianjin University of Science and Technology

organism_name: Bacillus velezensis


organism_name: Lactobacillus crispatus


asm_submitter: University of Ibadan, Nigeria


asm_submitter: Geology and Geophysics, Chinese Academy of Sciences

organism_name: Candidatus Magnetovum sp. WYHC-5


asm_submitter: University of Minho

organism_name: Pseudomonas sp. M1


asm_submitter: Jinan University

organism_name: Salmonella enterica subsp. enterica


asm_submitter: Yantai University

organism_name: Zhouia spongiae


annotation_name: Annotation submitted by Bielefeld University

annotation_provider: Bielefeld University

asm_submitter: Bielefeld University

organism_name: Streptomyces rimosus subsp. rimosus


asm_submitter: Peking University Health Science Center


asm_submitter: University of Maryland

assembly_level: Chromosome

organism_name: Bifidobacterium pseudolongum subsp. globosum


asm_submitter: The Hong Kong Polytechnic University


asm_submitter: Zhejiang University of Technology

organism_name: Streptomyces sp. 891-h


asm_submitter: Henan Agricultural University

organism_name: Agrobacterium tumefaciens


asm_submitter: Shenzhen Institute of Guangdong Ocean University

organism_name: Hyphomonadaceae bacterium


organism_name: Phaeodactylibacter sp.


organism_name: Neomegalonema sp.


organism_name: Sphingomonas aquatilis


organism_name: Flavobacteriaceae bacterium


asm_submitter: Ocean University of China

organism_name: Cryobacterium zhongshanensis


organism_name: Bacteroidia bacterium


organism_name: Streptococcus dysgalactiae


asm_submitter: Shanghai Jiao Tong University

organism_name: Klebsiella pneumoniae


asm_submitter: Guilin Medical University

organism_name: Firmicutes bacterium FC7


asm_submitter: University of East Anglia

organism_name: Candidatus Rhodoblastus alkanivorans


asm_submitter: Universidad Nacional de Quilmes

organism_name: Pseudomonas sp. BP01


asm_submitter: School of Life Science

infraspecific_name: strain=SYSU G00630

organism_name: Thermus altitudinis


infraspecific_name: strain=SYSU G00608

organism_name: Thermus albus


asm_submitter: Shinshu University Graduate School of Medicine

organism_name: Vibrio cincinnatiensis


excluded_from_refseq: contaminated


infraspecific_name: strain=SYSU G00506

organism_name: Thermus thalpophilus


infraspecific_name: strain=SYSU G00291

organism_name: Thermus hydrothermalis


infraspecific_name: strain=SYSU G00388

organism_name: Thermus neutrinimicus


asm_submitter: State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan

organism_name: Simplicispira sedimenti


organism_name: Dyella sedimenti


organism_name: Humibacter sp. RRB41


organism_name: Microbacterium sp. SS28


asm_submitter: Tamil Nadu Veterinary and Animal Sciences University

infraspecific_name: strain=CUL-TANUVAS 2020

organism_name: Streptococcus equi


asm_submitter: Institute of Agricultural Resources and Regional Planning,CAAS

organism_name: Pantoea sp. MQR6


asm_submitter: Universite Claude Bernard Lyon 1

organism_name: Musicola keenii


organism_name: Dyella sp. RRB7


organism_name: Nocardioides sp. SR21


asm_submitter: Universidad Peruana Cayetano Heredia

organism_name: Escherichia coli


asm_submitter: Yangzhou University


asm_submitter: Centers for Disease Control and Prevention

excluded_from_refseq: from large multi-isolate project

organism_name: Clostridioides difficile


organism_name: Brevibacillus borstelensis


organism_name: Firmicutes bacterium FC5


asm_submitter: The Second Affiliated Hospital of Zhejiang University School of Medicine, Zhejiang University

organism_name: Staphylococcus capitis


asm_submitter: German Federal Institute for Risk Assessment

excluded_from_refseq: genome length too large

organism_name: Vibrio parahaemolyticus


asm_submitter: International Brevipalpus Genome Consortium

organism_name: Candidatus Cardinium hertigii


asm_submitter: Shenzhen Institute of Guangdong Ocean University

organism_name: Simkaniaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Algiphilus sp.


organism_name: Rickettsiales bacterium


organism_name: Aquisalinus sp.


organism_name: Flavobacteriales bacterium


organism_name: bacterium


organism_name: Donghicola eburneus


organism_name: Saprospiraceae bacterium


organism_name: Oricola sp.


organism_name: Minisyncoccota bacterium


organism_name: Pseudomonadales bacterium


organism_name: Marivita sp.


organism_name: Phaeodactylibacter sp.


organism_name: Phaeobacter italicus


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Rhodovulum sp.


organism_name: Flavobacteriaceae bacterium


organism_name: Paracoccaceae bacterium


organism_name: Acidovorax sp.


asm_submitter: AAFC

organism_name: Dorea sp.


organism_name: Enterocloster aldenensis


organism_name: Coriobacteriaceae bacterium


organism_name: Clostridiales bacterium


organism_name: Caecibacter massiliensis


organism_name: Mycoplasmatota bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Mollicutes bacterium


organism_name: Bacteroidales bacterium


organism_name: Prevotellaceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Lactobacillus johnsonii


organism_name: Campylobacter lanienae


organism_name: Azospirillum sp.


organism_name: Spirochaetia bacterium


organism_name: Prevotella sp.


organism_name: Bacillota bacterium


organism_name: Roseburia sp.


organism_name: Eubacterium sp.


organism_name: Clostridia bacterium


organism_name: bacterium


organism_name: Blautia sp.


organism_name: Treponema berlinense


organism_name: Oscillospiraceae bacterium


organism_name: Ruminococcus sp.


organism_name: Treponema sp.


organism_name: Veillonellaceae bacterium


organism_name: Phocaeicola sp.


asm_submitter: Medical University of Vienna

organism_name: Escherichia coli


excluded_from_refseq: annotation fails completeness check


organism_name: Escherichia albertii


asm_submitter: Aarhus University

organism_name: Desulfobulbaceae bacterium AR4


organism_name: Candidatus Electrothrix sp. AR5


organism_name: Desulfobulbaceae bacterium AR3


organism_name: Candidatus Electrothrix sp. AR1


organism_name: Candidatus Electrothrix sp. GM3_4


organism_name: Candidatus Electrothrix gigas


organism_name: Candidatus Electrothrix sp. EH2


organism_name: Candidatus Electrothrix sp. AUS1_2


isolate: ATG1_2 ATG1

organism_name: Candidatus Electrothrix sp. ATG1_2 ATG1


organism_name: Candidatus Electrothrix sp. AUS4


isolate: ATG1_2 ATG2

organism_name: Candidatus Electrothrix sp. ATG1_2 ATG2


organism_name: Candidatus Electrothrix sp. AX1


organism_name: Candidatus Electrothrix sp. AX5


organism_name: Candidatus Electrothrix sp. MAN1_4


organism_name: Candidatus Electrothrix sp. LOE2


organism_name: Intestinimonas massiliensis (ex Afouda et al. 2020)


organism_name: Roseburia sp.


organism_name: Dorea formicigenerans


organism_name: Lachnospiraceae bacterium


organism_name: Ruminococcus sp.


organism_name: Bacteroidales bacterium


organism_name: Clostridia bacterium


organism_name: Clostridium sp.


organism_name: Clostridiales bacterium


organism_name: Rikenellaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Succinivibrio sp.


organism_name: Acholeplasma sp.


organism_name: Ruminococcus bromii


organism_name: Sarcina ventriculi


organism_name: Chlamydia suis


organism_name: Treponema porcinum


organism_name: Megasphaera elsdenii


organism_name: Ezakiella sp.


organism_name: Spirochaetia bacterium


organism_name: Mediterranea sp. (in: CFB group bacteria)


organism_name: Bacilli bacterium


organism_name: [Clostridium] symbiosum


organism_name: Oscillospiraceae bacterium


organism_name: Helicobacter sp.


organism_name: Ruminococcus sp.


organism_name: Clostridiales bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Fusicatenibacter sp.


organism_name: Peptoniphilus sp.


organism_name: Anaerostipes sp.


organism_name: Succinivibrio sp.


organism_name: Agathobacter sp.


organism_name: Porphyromonadaceae bacterium


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Phocaeicola plebeius


organism_name: Hallerella sp.


organism_name: Allocoprococcus comes


organism_name: bacterium


organism_name: Spirochaetia bacterium


organism_name: Enterococcus gallinarum


organism_name: Mycoplasmatota bacterium


organism_name: Bacteroidales bacterium


organism_name: Emergencia sp.


organism_name: Clostridiales bacterium


organism_name: Bacteroides xylanisolvens


organism_name: Bacillota bacterium


organism_name: Erysipelotrichaceae bacterium


organism_name: Pseudoflavonifractor sp.


organism_name: Clostridium sp.


organism_name: Prevotella sp.


organism_name: Odoribacter sp.


organism_name: Ligilactobacillus ruminis


organism_name: Eubacterium sp.


organism_name: Clostridium perfringens


organism_name: Acholeplasmatales bacterium


organism_name: Veillonella caviae


organism_name: Lachnospiraceae bacterium


organism_name: Alistipes sp.


organism_name: Bacteroidales bacterium


organism_name: Ruminococcus sp.


organism_name: Enterococcus faecalis


organism_name: Actinobacillus porcinus


organism_name: Fusobacterium sp.


organism_name: Helicobacter trogontum


organism_name: Clostridia bacterium


organism_name: Bacillota bacterium


organism_name: Lachnoclostridium sp.


organism_name: Dorea longicatena


organism_name: Bacteroides sp.


organism_name: Mycoplasmatota bacterium


organism_name: Eubacterium pyruvativorans


organism_name: Methanobrevibacter ruminantium


organism_name: Clostridiales bacterium


organism_name: Candidatus Colimorpha enterica


organism_name: Ligilactobacillus agilis


organism_name: Bacteroidales bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Erysipelotrichaceae bacterium


organism_name: Aerococcus sp.


organism_name: Collinsella bouchesdurhonensis


organism_name: Eubacterium sp.


organism_name: Lentisphaeria bacterium


organism_name: Acidaminococcus sp.


organism_name: Bacillota bacterium


organism_name: Lachnospiraceae bacterium


organism_name: bacterium


organism_name: Ruminococcus sp.


organism_name: Clostridium sp.


organism_name: Paraprevotella sp.


organism_name: Anaeroplasma sp.


organism_name: Spirochaetia bacterium


organism_name: Clostridia bacterium


organism_name: Prevotella sp.


organism_name: Elusimicrobiota bacterium


organism_name: Arcanobacterium sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Clostridiales bacterium


organism_name: Christensenellaceae bacterium


organism_name: Lactobacillus sp.


organism_name: Methanosphaera sp.


organism_name: Blautia sp.


organism_name: Lachnospiraceae bacterium


organism_name: Peptoniphilaceae bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Agathobacter sp.


organism_name: Bifidobacterium boum


organism_name: Dorea sp.


organism_name: Streptococcus sp.


organism_name: Sutterella sp.


organism_name: Caryophanales bacterium


organism_name: Prevotella sp.


organism_name: Clostridium sp.


organism_name: Eubacterium sp.


organism_name: Bacteroidales bacterium


organism_name: Brachyspira sp.


organism_name: Clostridiales bacterium


organism_name: Akkermansia muciniphila


organism_name: Faecalimonas umbilicata


organism_name: Bacillota bacterium


organism_name: bacterium


organism_name: Bacteroides thetaiotaomicron


organism_name: Blautia sp.


organism_name: Oscillospiraceae bacterium


organism_name: Christensenella sp.


organism_name: Ruminococcus sp.


organism_name: Lachnospiraceae bacterium


organism_name: Ligilactobacillus animalis


organism_name: Enterococcus hirae


organism_name: Roseburia sp.


organism_name: Acholeplasmataceae bacterium


organism_name: Eubacterium sp.


organism_name: Prevotella sp.


organism_name: Pseudoflavonifractor capillosus


organism_name: Methanomethylophilus alvi


organism_name: Clostridiales bacterium


organism_name: Mycoplasmatota bacterium


organism_name: Streptococcus vestibularis


organism_name: Coriobacteriaceae bacterium


organism_name: Anaerostipes sp.


organism_name: Clostridia bacterium


organism_name: Muribaculaceae bacterium


organism_name: Anaerococcus sp.


organism_name: Bacteroidales bacterium


organism_name: Helicobacter sp.


organism_name: Dialister histaminiformans


organism_name: Oscillospiraceae bacterium


organism_name: Blautia sp.


organism_name: Anaerostipes hadrus


organism_name: Bacillota bacterium


organism_name: Fusobacterium varium


organism_name: Parvimonas sp.


organism_name: Finegoldia magna


organism_name: Eubacteriaceae bacterium


organism_name: Sutterella sp.


organism_name: Coprobacillus sp.


organism_name: Clostridiales bacterium


organism_name: Mycoplasmatota bacterium


organism_name: Ruminococcus sp.


organism_name: [Bacteroides] pectinophilus


organism_name: Dysosmobacter sp.


organism_name: Methanomassiliicoccales archaeon


organism_name: Dialister succinatiphilus


organism_name: Alistipes sp.


organism_name: Collinsella sp.


organism_name: Bacteroidales bacterium


organism_name: Prevotella pectinovora


organism_name: Phocaeicola plebeius


organism_name: Selenomonas sp.


organism_name: Limosilactobacillus mucosae


organism_name: bacterium


organism_name: Solobacterium sp.


organism_name: Absicoccus porci


organism_name: Clostridiales bacterium


organism_name: Clostridium sp.


organism_name: Lachnospiraceae bacterium


organism_name: Prevotella sp.


organism_name: Spirochaetales bacterium


organism_name: Mycoplasmatota bacterium


organism_name: Subdoligranulum variabile


organism_name: Rikenellaceae bacterium


organism_name: Collinsella sp.


organism_name: Parabacteroides distasonis


organism_name: Bacteroidales bacterium


organism_name: Ligilactobacillus salivarius


organism_name: Enterocloster clostridioformis


organism_name: Clostridia bacterium


organism_name: Dorea sp.


organism_name: Galactobacillus timonensis


organism_name: bacterium


organism_name: Christensenellaceae bacterium


organism_name: Subdoligranulum sp.


organism_name: Catenibacterium mitsuokai


organism_name: Selenomonadaceae bacterium


organism_name: Oscillibacter sp.


organism_name: Prevotella sp.


organism_name: Selenomonas sp.


organism_name: Lachnoclostridium sp.


organism_name: Faecalibacterium sp.


organism_name: Roseburia sp.


organism_name: Bacillota bacterium


organism_name: Bacteroidales bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Cloacibacillus porcorum


organism_name: Veillonellaceae bacterium


organism_name: Clostridium sp.


organism_name: Sutterellaceae bacterium


organism_name: Lachnospira sp.


organism_name: bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Fusobacterium perfoetens


organism_name: Porphyromonas sp.


organism_name: Erysipelotrichaceae bacterium


organism_name: Clostridiales bacterium


organism_name: Flintibacter sp.


organism_name: Prevotella heparinolytica


organism_name: Mollicutes bacterium


organism_name: Helicobacter sp.


organism_name: Faecalibacterium sp.


organism_name: Pseudomonadota bacterium


organism_name: Corynebacterium glucuronolyticum


organism_name: Faecalibacterium prausnitzii


organism_name: Paraprevotella sp.


organism_name: Prevotella sp.


organism_name: Lachnospiraceae bacterium


organism_name: Megasphaera elsdenii


organism_name: Collinsella sp.


organism_name: Selenomonadales bacterium


organism_name: Bacteroidales bacterium


organism_name: Subdoligranulum sp.


organism_name: Clostridiales bacterium


organism_name: Spirochaetia bacterium


organism_name: Clostridium sp.


organism_name: Bacillota bacterium


organism_name: Eubacterium coprostanoligenes


organism_name: Agathobacter sp.


organism_name: bacterium


organism_name: Eubacterium sp.


organism_name: Erysipelotrichaceae bacterium


organism_name: Bacteroides uniformis


organism_name: Campylobacter sp.


organism_name: Prevotella sp.


organism_name: Pyramidobacter sp.


organism_name: Lentisphaeria bacterium


organism_name: Coriobacteriaceae bacterium


organism_name: Olsenella sp.


organism_name: Lactobacillus delbrueckii


organism_name: Selenomonas sp.


organism_name: Acidaminococcus fermentans


organism_name: Clostridiales bacterium


organism_name: Bacteroidales bacterium


organism_name: Helicobacter sp.


organism_name: Blautia sp.


organism_name: Collinsella sp.


organism_name: Spirochaetia bacterium


organism_name: Dialister sp.


organism_name: Muribaculaceae bacterium


organism_name: Dongibacter bovis


organism_name: Prevotella sp.


organism_name: Selenomonadaceae bacterium


organism_name: Megasphaera elsdenii


organism_name: Peptoniphilaceae bacterium


organism_name: Alistipes sp.


organism_name: bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Selenomonas sp.


organism_name: Treponema porcinum


organism_name: Lactobacillus johnsonii


organism_name: Campylobacter sp.


organism_name: Clostridium sp.


organism_name: Bacteroidales bacterium


organism_name: Collinsella sp.


organism_name: Succinivibrio sp.


organism_name: Anaeromassilibacillus sp.


organism_name: Mollicutes bacterium


organism_name: Prevotella sp.


organism_name: Mucispirillum sp.


organism_name: Clostridiales bacterium


organism_name: Spirochaetia bacterium


organism_name: Selenomonadaceae bacterium


organism_name: Clostridia bacterium


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Olsenella sp.


organism_name: Mitsuokella jalaludinii


organism_name: Ruminococcus sp.


organism_name: Flintibacter sp.


organism_name: Fusobacterium mortiferum


organism_name: Bacillota bacterium


organism_name: Faecalicatena sp.


organism_name: bacterium


organism_name: Clostridium sp.


organism_name: Treponema porcinum


organism_name: Campylobacter coli


organism_name: Candidatus Avelusimicrobium faecicola


organism_name: Sutterella wadsworthensis


organism_name: Megasphaera elsdenii


organism_name: Parabacteroides distasonis


organism_name: Bacilli bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Mollicutes bacterium


organism_name: Mitsuokella jalaludinii


organism_name: Mogibacterium sp.


organism_name: Mycoplasmatota bacterium


organism_name: Eshraghiella crossota


organism_name: Veillonellaceae bacterium


organism_name: Lachnobacterium sp.


organism_name: bacterium


organism_name: Campylobacter sp.


organism_name: Oscillospiraceae bacterium


organism_name: Clostridiales bacterium


organism_name: Parabacteroides sp.


organism_name: Spirochaetia bacterium


organism_name: Agathobacter sp.


organism_name: Bacteroidales bacterium


organism_name: Prevotella sp.


organism_name: Agathobaculum sp.


organism_name: Faecalibacterium sp.


organism_name: Clostridium sp.


organism_name: Limosilactobacillus vaginalis


organism_name: Flavonifractor plautii


organism_name: Mediterraneibacter gnavus


organism_name: Treponema porcinum


organism_name: Eubacterium sp.


organism_name: Gemmiger formicilis


organism_name: Akkermansia muciniphila


organism_name: Lachnospiraceae bacterium


organism_name: Clostridiales bacterium


organism_name: Prevotellaceae bacterium


organism_name: Campylobacter sp.


organism_name: Clostridia bacterium


organism_name: Ruminococcus bromii


organism_name: Methanobrevibacter sp.


organism_name: Prevotella sp.


organism_name: Spirochaetia bacterium


organism_name: Erysipelotrichaceae bacterium


organism_name: Bacteroidales bacterium


organism_name: Clostridium sp.


organism_name: Hallerella sp.


organism_name: Solobacterium sp.


organism_name: Coriobacteriaceae bacterium


organism_name: Eubacterium sp.


organism_name: Phocaeicola vulgatus


organism_name: Selenomonadales bacterium


organism_name: Collinsella sp.


organism_name: Lachnospiraceae bacterium


organism_name: Clostridiales bacterium


organism_name: Mycoplasmatota bacterium


organism_name: Clostridiaceae bacterium


organism_name: Clostridia bacterium


organism_name: Parabacteroides sp.


organism_name: Anaerobiospirillum succiniciproducens


organism_name: Fusobacterium mortiferum


organism_name: Streptococcus alactolyticus


organism_name: Lactobacillus johnsonii


organism_name: Bacteroidales bacterium


organism_name: Butyricimonas virosa


organism_name: Oscillibacter sp.


organism_name: Streptococcus hyointestinalis


organism_name: bacterium


organism_name: Treponema sp.


organism_name: Prevotella sp.


organism_name: Ruminococcus sp.


organism_name: Clostridiales bacterium


organism_name: Veillonellaceae bacterium


organism_name: Bacillota bacterium


organism_name: Subdoligranulum variabile


organism_name: Erysipelotrichaceae bacterium


organism_name: Parabacteroides distasonis


organism_name: Alistipes sp.


organism_name: Veillonella caviae


organism_name: Succinatimonas sp.


organism_name: [Clostridium] scindens


organism_name: Collinsella sp.


organism_name: Lawsonibacter sp.


organism_name: Shigella flexneri


organism_name: Oscillospiraceae bacterium


organism_name: Subdoligranulum sp.


organism_name: Rikenellaceae bacterium


organism_name: Prevotella sp.


organism_name: Spirochaetia bacterium


organism_name: Clostridia bacterium


organism_name: Blautia sp.


organism_name: Bacteroidales bacterium


organism_name: Clostridiales bacterium


organism_name: Eubacterium coprostanoligenes


organism_name: Lachnospiraceae bacterium


organism_name: Fibrobacter sp.


organism_name: Campylobacter sp.


organism_name: Paraprevotella sp.


organism_name: Limosilactobacillus reuteri


organism_name: Treponema porcinum


organism_name: Erysipelotrichaceae bacterium


organism_name: Negativibacillus massiliensis


organism_name: Collinsella sp.


organism_name: Desulfovibrio piger


organism_name: Methanobrevibacter boviskoreani


organism_name: Gemmiger formicilis


organism_name: Treponema succinifaciens


organism_name: Bacillota bacterium


organism_name: Oribacterium sp.


organism_name: Intestinimonas butyriciproducens


organism_name: Megasphaera elsdenii


organism_name: Dialister sp.


organism_name: Clostridiales bacterium


organism_name: Ruminococcus sp.


organism_name: bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Butyricicoccus porcorum


organism_name: Mycoplasmatota bacterium


organism_name: Bacteroidales bacterium


organism_name: Collinsella sp.


organism_name: Succinatimonas hippei


organism_name: Faecalibacterium sp.


organism_name: Spirochaetia bacterium


organism_name: Christensenellaceae bacterium


organism_name: Desulfovibrio piger


organism_name: Clostridium sp.


organism_name: Sutterella sp.


organism_name: Campylobacter coli


organism_name: Pygmaiobacter massiliensis


organism_name: Clostridiales bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Campylobacter sp.


organism_name: Ezakiella sp.


organism_name: Oscillibacter sp.


organism_name: Dysosmobacter sp.


organism_name: Arcanobacterium sp.


organism_name: Shigella dysenteriae


organism_name: Bacteroidales bacterium


organism_name: Prevotella sp.


organism_name: Bacillota bacterium


organism_name: Lentisphaeraceae bacterium


organism_name: Mobiluncus sp.


organism_name: Mitsuokella jalaludinii


organism_name: Ruminococcus sp.


organism_name: Subdoligranulum sp.


organism_name: Mollicutes bacterium


organism_name: Christensenellaceae bacterium


organism_name: Clostridiales bacterium


organism_name: Collinsella sp.


organism_name: Peptoniphilaceae bacterium


organism_name: Ruminococcus callidus


organism_name: Oscillospiraceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Clostridium sp.


organism_name: Bacteroidales bacterium


organism_name: bacterium


organism_name: Ruthenibacterium lactatiformans


organism_name: Romboutsia timonensis


organism_name: Campylobacter sp.


organism_name: Lachnobacterium sp.


organism_name: Megasphaera elsdenii


organism_name: Anaerolactibacter massiliensis


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; genome length too small

organism_name: Dongibacter bovis


organism_name: Galactobacillus timonensis


organism_name: Paraprevotella sp.


organism_name: Lactobacillus johnsonii


organism_name: Dialister sp.


organism_name: Succinatimonas sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Clostridiales bacterium


organism_name: Bifidobacterium pseudolongum


organism_name: Prevotella sp.


organism_name: Bacteroidales bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Mollicutes bacterium


organism_name: Escherichia coli


organism_name: Methanobrevibacter boviskoreani


organism_name: Bacteroides sp.


organism_name: Lachnospiraceae bacterium


organism_name: Intestinibacter sp.


organism_name: Parabacteroides sp.


organism_name: Methanobrevibacter woesei


organism_name: Clostridiaceae bacterium


organism_name: Veillonellaceae bacterium


organism_name: bacterium


organism_name: Anaerobutyricum hallii


organism_name: Faecalibacterium sp.


organism_name: Cuneatibacter sp.


organism_name: Lachnobacterium sp.


organism_name: Dysosmobacter sp.


organism_name: Selenomonadales bacterium


organism_name: Prevotella sp.


organism_name: Bacteroidales bacterium


organism_name: Eubacterium coprostanoligenes


organism_name: Succinatimonas sp.


organism_name: Anaerococcus sp.


organism_name: Mollicutes bacterium


organism_name: Parafannyhessea umbonata


organism_name: Bacteroides fragilis


excluded_from_refseq: contaminated; unverified source organism; annotation fails MAG completeness check; derived from metagenome

organism_name: Butyricicoccus sp.


organism_name: Limosilactobacillus reuteri


organism_name: Megasphaera elsdenii


organism_name: Aerococcus suis


organism_name: Fusobacterium sp.


organism_name: Campylobacter sp.


organism_name: Erysipelotrichaceae bacterium


organism_name: Bacilli bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Veillonellaceae bacterium


organism_name: Schaalia hyovaginalis


organism_name: Roseburia faecis


organism_name: bacterium


organism_name: Ruminococcus sp.


organism_name: Clostridiales bacterium


organism_name: Acidaminococcus fermentans


organism_name: Caryophanales bacterium


organism_name: Clostridium sp.


organism_name: Prevotella sp.


organism_name: Spirochaetaceae bacterium


organism_name: Bacteroides sp.


organism_name: Megasphaera elsdenii


organism_name: Solobacterium sp.


organism_name: Parafannyhessea umbonata


organism_name: Erysipelotrichaceae bacterium


organism_name: Eisenbergiella massiliensis


organism_name: Bacteroidales bacterium


organism_name: Clostridiaceae bacterium


organism_name: Bacillota bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Faecalibacterium prausnitzii


organism_name: Clostridiales bacterium


organism_name: Mollicutes bacterium


organism_name: Treponema porcinum


organism_name: Aerococcus urinaeequi


organism_name: Coriobacteriaceae bacterium


organism_name: Prevotella sp.


organism_name: Pseudocoprococcus catus


organism_name: Parabacteroides sp.


organism_name: bacterium


organism_name: Bacilli bacterium


organism_name: Bilophila wadsworthia


organism_name: Erysipelotrichaceae bacterium


organism_name: Bacteroidales bacterium


organism_name: Prevotellaceae bacterium


organism_name: Ruminococcus sp.


organism_name: Lachnospiraceae bacterium


organism_name: Spirochaetia bacterium


organism_name: Mesosutterella sp.


organism_name: Phascolarctobacterium succinatutens


organism_name: Bacillota bacterium


organism_name: Bifidobacterium animalis


organism_name: Hungatella sp.


organism_name: Prevotella sp.


organism_name: Paraprevotella sp.


organism_name: Clostridiales bacterium


organism_name: Collinsella sp.


organism_name: Oscillospiraceae bacterium


organism_name: Alistipes sp.


excluded_from_refseq: contaminated; derived from metagenome; genus undefined


excluded_from_refseq: derived from metagenome

organism_name: Bacteroides fragilis


organism_name: Butyricimonas virosa


organism_name: Dialister sp.


organism_name: Bacteroidales bacterium


organism_name: Clostridium sp.


organism_name: bacterium


organism_name: Holdemanella sp.


organism_name: Schaalia hyovaginalis


organism_name: Lactobacillus amylovorus


organism_name: Bacteroides pyogenes


organism_name: Oscillibacter sp.


organism_name: Ruminococcus bromii


organism_name: Succinatimonas sp.


organism_name: Dongibacter bovis


organism_name: Clostridiales bacterium


organism_name: Mollicutes bacterium


organism_name: Helicobacter sp.


organism_name: Megasphaera elsdenii


organism_name: Campylobacter sp.


organism_name: Dialister sp.


organism_name: Paraprevotella sp.


organism_name: Parabacteroides merdae


organism_name: Collinsella sp.


organism_name: Bacteroidales bacterium


organism_name: Clostridium sp.


organism_name: Lachnospiraceae bacterium


organism_name: Selenomonadaceae bacterium


organism_name: Solobacterium sp.


organism_name: bacterium


organism_name: Blautia sp.


organism_name: Dysosmobacter sp.


organism_name: Clostridiales bacterium


organism_name: Trueperella sp.


organism_name: Butyricimonas virosa


organism_name: Prevotella sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Alistipes senegalensis


organism_name: Clostridia bacterium


organism_name: Shigella dysenteriae


organism_name: Dialister sp.


organism_name: Bacteroidales bacterium


organism_name: Spirochaetia bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Arcanobacterium sp.


organism_name: Mycoplasmatota bacterium


organism_name: Megasphaera sp.


organism_name: Alistipes shahii


organism_name: Desulfovibrio piger


organism_name: Clostridium sp.


organism_name: Christensenellaceae bacterium


organism_name: Campylobacter sp.


organism_name: Prevotella sp.


organism_name: Eubacterium sp.


organism_name: Campylobacter lanienae


organism_name: Lactobacillus amylovorus


organism_name: Parabacteroides sp.


organism_name: Ruminococcus sp.


organism_name: [Clostridium] innocuum


organism_name: Bacteroidales bacterium


organism_name: Hungatella sp.


organism_name: Fusobacterium necrophorum


organism_name: Bacteroides stercoris


organism_name: Mollicutes bacterium


organism_name: Butyricimonas virosa


organism_name: Clostridiales bacterium


organism_name: [Actinobacillus] rossii


organism_name: Oscillospiraceae bacterium


organism_name: Desulfovibrio piger


organism_name: Bacteroides uniformis


organism_name: Desulfovibrio sp.


organism_name: Spirochaetia bacterium


organism_name: Clostridium sp.


organism_name: Christensenella sp.


organism_name: Methanobrevibacter smithii


organism_name: Bacillota bacterium


organism_name: Helicobacter bilis


organism_name: Bacteroidales bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Thomasclavelia ramosa


organism_name: Treponema sp.


organism_name: Methanobrevibacter sp.


organism_name: Prevotella sp.


organism_name: Campylobacter sp.


organism_name: Mollicutes bacterium


organism_name: Parabacteroides distasonis


organism_name: Spirochaetales bacterium


organism_name: Lactobacillus johnsonii


organism_name: Clostridiales bacterium


organism_name: [Pasteurella] aerogenes


organism_name: Blautia sp.


organism_name: Treponema porcinum


organism_name: Subdoligranulum sp.


organism_name: Lachnobacterium sp.


organism_name: Campylobacter coli


organism_name: Oscillospiraceae bacterium


organism_name: Bacteroides sp.


organism_name: Megasphaera elsdenii


organism_name: Coriobacteriaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Prevotella sp.


organism_name: Solobacterium sp.


organism_name: Clostridium sp.


organism_name: Parabacteroides merdae


organism_name: Campylobacter sp.


organism_name: Ruminococcus sp.


organism_name: Bacteroidales bacterium


organism_name: Selenomonadales bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Oliverpabstia sp.


organism_name: Helicobacter sp.


organism_name: Veillonellaceae bacterium


organism_name: Spirochaetia bacterium


organism_name: Mollicutes bacterium


organism_name: Christensenellaceae bacterium


organism_name: Shigella flexneri


organism_name: Actinomyces urogenitalis


organism_name: Prevotella sp.


organism_name: Collinsella sp.


organism_name: Coriobacteriaceae bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Fusicatenibacter saccharivorans


organism_name: Clostridium sp.


organism_name: Treponema porcinum


organism_name: Desulfovibrio piger


organism_name: Streptococcus sp.


organism_name: Schaalia hyovaginalis


organism_name: Bacteroidales bacterium


organism_name: Candidatus Avelusimicrobium faecicola


organism_name: Roseburia hominis


organism_name: Bacillota bacterium


organism_name: Lachnobacterium sp.


organism_name: Spirochaetia bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Pyramidobacter sp.


organism_name: Enterocloster clostridioformis


organism_name: Collinsella sp.


organism_name: Blautia massiliensis (ex Durand et al. 2017)


organism_name: Veillonella caviae


organism_name: Oscillospiraceae bacterium


organism_name: Mycoplasmatota bacterium


organism_name: Clostridiales bacterium


organism_name: Limosilactobacillus reuteri


organism_name: Parabacteroides sp.


organism_name: Lactobacillus johnsonii


organism_name: [Pasteurella] aerogenes


organism_name: Mediterraneibacter faecis


organism_name: Shigella flexneri


organism_name: Mitsuokella jalaludinii


organism_name: Erysipelotrichaceae bacterium


organism_name: Selenomonadaceae bacterium


organism_name: Prevotella sp.


organism_name: Clostridia bacterium


organism_name: Bacteroidales bacterium


organism_name: Fusobacterium mortiferum


organism_name: Bacteroides uniformis


organism_name: Enorma burkinafasonensis


organism_name: Schaalia hyovaginalis


organism_name: Streptococcus orisratti


organism_name: Akkermansia muciniphila


organism_name: Christensenellaceae bacterium


organism_name: [Eubacterium] saphenum


organism_name: Bacillota bacterium


organism_name: Subdoligranulum variabile


organism_name: Clostridiales bacterium


organism_name: Collinsella sp.


organism_name: Flintibacter sp.


organism_name: Mollicutes bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Enorma sp.


organism_name: Oscillibacter sp.


organism_name: Lachnospiraceae bacterium


organism_name: Bacteroidales bacterium


organism_name: bacterium


organism_name: Paraprevotella sp.


organism_name: Helicobacter sp.


organism_name: Phocaeicola vulgatus


organism_name: Solobacterium sp.


organism_name: Phascolarctobacterium sp.


organism_name: Bacteroides sp.


organism_name: Megasphaera elsdenii


organism_name: Bacillota bacterium


organism_name: Akkermansia sp.


organism_name: Clostridiales bacterium


organism_name: Parabacteroides merdae


organism_name: Trueperella pyogenes


organism_name: Dysosmobacter sp.


organism_name: Sutterella parvirubra


organism_name: Blautia glucerasea


organism_name: Bacilli bacterium


organism_name: Ruminococcus sp.


organism_name: Bacteroidales bacterium


organism_name: Fusobacterium necrophorum


organism_name: Prevotella sp.


organism_name: Collinsella sp.


organism_name: Mediterraneibacter torques


organism_name: Lentisphaeria bacterium


organism_name: Desulfovibrio piger


organism_name: Mollicutes bacterium


organism_name: Prevotellaceae bacterium


organism_name: Succinivibrio sp.


organism_name: Erysipelotrichaceae bacterium


organism_name: bacterium


organism_name: Eubacterium sp.


organism_name: Clostridiales bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Parabacteroides sp.


organism_name: Spirochaetia bacterium


organism_name: Bacteroidales bacterium


organism_name: Spirochaetales bacterium


organism_name: Robinsoniella sp.


organism_name: Oscillospiraceae bacterium


organism_name: Bacilli bacterium


organism_name: Mycoplasmatota bacterium


asm_submitter: Tampere University

organism_name: Methylobacter sp. S3L5C


annotation_name: Annotation submitted by Leibniz Institute DSMZ

annotation_provider: Leibniz Institute DSMZ

asm_submitter: Leibniz Institute DSMZ

infraspecific_name: strain=DSM 14862

organism_name: Sulfitobacter indolifex


infraspecific_name: strain=DSM 110277

organism_name: Sulfitobacter pontiacus


infraspecific_name: strain=DSM 107133

organism_name: Pseudosulfitobacter sp. DSM 107133


infraspecific_name: strain=DSM 110093

organism_name: Sulfitobacter sp. DSM 110093


infraspecific_name: strain=DSM 109990

organism_name: Sulfitobacter dubius


asm_submitter: IMR

organism_name: Klebsiella pneumoniae


asm_submitter: Center of innovative and applied Bioprocessing

organism_name: Microbacterium sp. CIAB417


asm_submitter: University of Balearic Islands

organism_name: Pseudomonas maioricensis


asm_submitter: Oak Ridge National Laboratory

organism_name: Clostridia bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Erysipelotrichaceae bacterium


organism_name: Enterococcus faecalis


organism_name: Hespellia sp.


organism_name: Oscillospiraceae bacterium


organism_name: Bacillota bacterium


organism_name: Enterorhabdus sp.


organism_name: Dorea sp.


organism_name: Lawsonibacter sp.


organism_name: Staphylococcus xylosus


organism_name: Oscillibacter sp.


organism_name: Clostridiales bacterium


organism_name: Bacilli bacterium


organism_name: Peptococcaceae bacterium


organism_name: Eggerthellaceae bacterium


organism_name: Eubacterium sp.


organism_name: Clostridia bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Acutalibacter sp.


organism_name: Roseburia sp.


organism_name: Adlercreutzia sp.


organism_name: Oscillospiraceae bacterium


organism_name: Ruminiclostridium sp.


organism_name: Provencibacterium sp.


organism_name: Lachnospira sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined


organism_name: Mammaliicoccus sciuri


organism_name: Anaerotruncus sp.


organism_name: Dorea sp.


organism_name: Hungatella sp.


asm_submitter: Federal University of Vicosa

organism_name: Mesomycoplasma hyopneumoniae


organism_name: Erysipelotrichaceae bacterium


organism_name: Bacilli bacterium


organism_name: Clostridiales bacterium


organism_name: Clostridia bacterium


organism_name: Lawsonibacter sp.


organism_name: Lachnospiraceae bacterium


organism_name: Oscillibacter sp.


organism_name: Bacillota bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Coprococcus sp.


organism_name: Eubacterium sp.


organism_name: Atopobiaceae bacterium


organism_name: Angelakisella sp.


organism_name: Lactococcus lactis


organism_name: Anaerotignum sp.


organism_name: Turicibacter sp.


organism_name: Dorea sp.


organism_name: Ruminococcus sp.


organism_name: Hungatella sp.


organism_name: Bifidobacterium pseudolongum


organism_name: Clostridia bacterium


organism_name: Bacilli bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Oscillibacter sp.


organism_name: Clostridiales bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Ruminiclostridium sp.


organism_name: Enterobacter sp.


organism_name: Clostridiaceae bacterium


organism_name: Lawsonibacter sp.


organism_name: Erysipelotrichaceae bacterium


organism_name: Eubacterium sp.


organism_name: Angelakisella sp.


organism_name: Acutalibacter sp.


organism_name: Dorea sp.


organism_name: Bacteroides thetaiotaomicron


organism_name: Hungatella sp.


organism_name: Clostridia bacterium


organism_name: Muribaculaceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Oscillibacter sp.


organism_name: Dubosiella newyorkensis


organism_name: Peptococcaceae bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Coprobacillus sp.


organism_name: Romboutsia sp.


organism_name: Clostridium sp.


organism_name: Bacilli bacterium


organism_name: Eubacterium sp.


organism_name: Eggerthellaceae bacterium


organism_name: Flavonifractor sp.


organism_name: Thomasclavelia cocleata


organism_name: Lawsonibacter sp.


organism_name: Ruminococcus sp.


organism_name: Anaerotruncus sp.


organism_name: Dorea sp.


organism_name: Muribaculaceae bacterium


organism_name: Clostridia bacterium


organism_name: Acholeplasmatales bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Acutalibacter muris


organism_name: Akkermansia muciniphila


organism_name: Angelakisella sp.


organism_name: Adlercreutzia caecimuris


organism_name: Acutalibacter sp.


organism_name: Oscillibacter sp.


organism_name: Bacilli bacterium


organism_name: Alistipes sp.


organism_name: Lawsonibacter sp.


organism_name: Romboutsia sp.


organism_name: Eggerthellaceae bacterium


organism_name: Dorea sp.


organism_name: Clostridiales bacterium


organism_name: Clostridia bacterium


organism_name: Muribaculaceae bacterium


organism_name: Erysipelotrichaceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Clostridium sp.


organism_name: Parasutterella excrementihominis


organism_name: Oscillospiraceae bacterium


organism_name: Ruminococcus sp.


organism_name: Bacillota bacterium


organism_name: Turicibacter sp.


organism_name: Hungatella sp.


organism_name: Eubacterium sp.


organism_name: Oscillibacter sp.


organism_name: Flavonifractor sp.


organism_name: Bacilli bacterium


organism_name: Emergencia sp.


organism_name: Clostridiales bacterium


organism_name: Ruminiclostridium sp.


organism_name: Adlercreutzia mucosicola


organism_name: Clostridiaceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Clostridia bacterium


organism_name: Dorea sp.


organism_name: Oscillospiraceae bacterium


organism_name: Enterobacter hormaechei subsp. steigerwaltii


organism_name: Erysipelotrichaceae bacterium


organism_name: Angelakisella sp.


organism_name: Lactobacillus johnsonii


organism_name: Bacteroides xylanisolvens


organism_name: Eubacterium sp.


organism_name: Acutalibacter muris


organism_name: Oscillibacter sp.


organism_name: Lawsonibacter sp.


organism_name: Acutalibacter sp.


organism_name: Clostridiales bacterium


organism_name: Clostridium sp.


organism_name: Bacillota bacterium


organism_name: Bacilli bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Ruminococcus sp.


organism_name: Oscillospiraceae bacterium


organism_name: Dorea sp.


organism_name: Muribaculaceae bacterium


organism_name: Clostridia bacterium


organism_name: Eggerthellaceae bacterium


organism_name: Emergencia sp.


organism_name: Hungatella sp.


organism_name: Thomasclavelia cocleata


organism_name: Vibrio parahaemolyticus


organism_name: Eubacterium sp.


asm_submitter: China Agricultural University

organism_name: Proteus mirabilis


asm_submitter: The University of Queensland

organism_name: Lacticaseibacillus rhamnosus


asm_submitter: OUTBREAK

infraspecific_name: strain=CE 1871

organism_name: Escherichia coli


infraspecific_name: strain=CE 1882


infraspecific_name: strain=CE 1760


infraspecific_name: strain=CE 1860


infraspecific_name: strain=CE 1708


infraspecific_name: strain=CE 1751


asm_submitter: University of Tuebingen

organism_name: Pseudomonas atacamensis


organism_name: Flavobacterium pectinovorum


organism_name: Rhizobium skierniewicense


organism_name: Arthrobacter humicola


organism_name: Bacillus altitudinis


organism_name: Microbacterium proteolyticum


infraspecific_name: strain=DSM 102624

organism_name: Methylobacterium goesingense


asm_submitter: Liberty University

excluded_from_refseq: genus undefined

organism_name: Micrococcales bacterium 31B


asm_submitter: Institute for Communicable Disease Control and Prevention,Chinese Center for Disease Control and Pr

organism_name: Clostridioides difficile


excluded_from_refseq: unverified source organism; from large multi-isolate project


release_type: Minor


organism_name: Oscillibacter sp.


organism_name: Lachnospiraceae bacterium


organism_name: Lawsonibacter sp.


organism_name: Acholeplasmatales bacterium