organism_name: Salmonella enterica subsp. enterica serovar Hadar


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: CDC

assembly_level: Contig

assembly_type: haploid

excluded_from_refseq: from large multi-isolate project

genome_rep: Full

group: bacteria

organism_name: Shigella flexneri

release_type: Major

version_status: latest


organism_name: Escherichia coli


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


asm_submitter: National Center for Biotechnology Information

organism_name: Enterococcus faecium


organism_name: Salmonella enterica


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Derby


asm_submitter: USDA FSIS

organism_name: Campylobacter jejuni


asm_submitter: FDA Center for Food Safety and Applied Nutrition

organism_name: Listeria monocytogenes


asm_submitter: Centers for Disease Control and Prevention


organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: University of Zurich

assembly_level: Complete Genome

organism_name: Vagococcus lutrae

paired_asm_comp: identical

refseq_category: reference genome


organism_name: Enterococcus faecalis


asm_submitter: University of Washington-Seattle

excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Akkermansiaceae bacterium


organism_name: Flavobacteriaceae bacterium


excluded_from_refseq: derived from metagenome

organism_name: Hellea sp.


organism_name: Bdellovibrionales bacterium


organism_name: Arenicella sp.


organism_name: Granulosicoccus sp.


organism_name: Dokdonia sp.


organism_name: Altererythrobacter sp.


organism_name: Saprospiraceae bacterium


organism_name: Lacinutrix sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined


organism_name: Phycisphaera sp.


asm_submitter: J. Craig Venter Institute

excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Lancefieldella parvula


organism_name: Gammaproteobacteria bacterium


organism_name: Mariniblastus sp.


organism_name: Escherichia coli


organism_name: Salmonella enterica


organism_name: Flavimaricola sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Litorimonas sp.


organism_name: Pseudomonadales bacterium


organism_name: Bacteriovoracaceae bacterium


organism_name: Olleya sp.


organism_name: Akkermansiaceae bacterium


organism_name: Listeria monocytogenes


organism_name: Rickettsiales bacterium


excluded_from_refseq: contaminated; derived from metagenome; genus undefined

organism_name: Candidatus Altimarinota bacterium


organism_name: Saprospiraceae bacterium


organism_name: Bdellovibrionales bacterium


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genus undefined


organism_name: Shigella flexneri


organism_name: Flavobacteriaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Dokdonia sp.


organism_name: Oligoflexales bacterium


organism_name: Nonlabens sp.


organism_name: Granulosicoccaceae bacterium


organism_name: Salmonella enterica


organism_name: Robiginitomaculum sp.


organism_name: Granulosicoccus sp.


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Ascidiaceihabitans sp.


organism_name: Akkermansiaceae bacterium


organism_name: Rickettsiaceae bacterium


organism_name: Alteromonadaceae bacterium


organism_name: Arenicella sp.


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Adelaide


organism_name: Enterococcus faecium


organism_name: Actinomyces graevenitzii


organism_name: Mogibacterium diversum


organism_name: Rothia mucilaginosa


organism_name: Escherichia coli


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


asm_submitter: FDA/CFSAN


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


organism_name: Shigella flexneri


asm_submitter: Center for Food Safety and Applied Nutrition


organism_name: Vibrio alginolyticus


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


organism_name: Salmonella enterica subsp. enterica serovar Newport


asm_submitter: Health Protection Agency

organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Bredeney


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


organism_name: Escherichia coli


organism_name: Salmonella enterica


excluded_from_refseq: unverified source organism; from large multi-isolate project


organism_name: Shigella sonnei


organism_name: Enterococcus faecalis


organism_name: Salmonella enterica subsp. enterica serovar Bovismorbificans


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Klebsiella pneumoniae


organism_name: Klebsiella variicola


asm_submitter: University of Washington

organism_name: Marinobacter sp. M4C


organism_name: Marinobacter sp. M3C


organism_name: Marinobacter sp. M2C


organism_name: Klebsiella quasipneumoniae


organism_name: Vibrio parahaemolyticus


organism_name: Salmonella enterica subsp. enterica serovar Liverpool


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Listeria monocytogenes


organism_name: Vibrio cholerae


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Klebsiella pneumoniae


organism_name: Klebsiella variicola


organism_name: Marinobacter sp. M1C


asm_submitter: Ministry of Public Health-Thailand

assembly_level: Chromosome

organism_name: Kluyvera ascorbata


asm_submitter: CDC


asm_submitter: GenomeTrakr Project: Massachusetts Department of Public Health


asm_submitter: National Center for Biotechnology Information

organism_name: Listeria innocua


infraspecific_name: strain=clinical isolate of L. monocytogenes


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Staphylococcus pseudintermedius


organism_name: Vibrio parahaemolyticus


asm_submitter: Brigham & Women's Hospital

organism_name: Enterococcus faecium


organism_name: Acinetobacter baumannii


infraspecific_name: strain=Clinical Sample 61

organism_name: Legionella pneumophila


infraspecific_name: strain=Nursing Home Sample 2


infraspecific_name: strain=Clinical Sample 60


infraspecific_name: strain=Nursing Home Sample 3


infraspecific_name: strain=Post Mortem sample 2


organism_name: Listeria monocytogenes


infraspecific_name: strain=Clinical Sample 59


asm_submitter: FDA


asm_submitter: FDA Center for Food Safety and Applied Nutrition


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


isolate: not applicable


infraspecific_name: strain=Post Mortem sample 3


infraspecific_name: strain=Clinical Sample 57


infraspecific_name: strain=Post Mortem sample 1


infraspecific_name: strain=South Bronx Hotel Sample 5


infraspecific_name: strain=Clinical Sample 55


infraspecific_name: strain=Clinical Sample 56


infraspecific_name: strain=Clinical Sample 54


infraspecific_name: strain=Clinical Sample 53


infraspecific_name: strain=Clinical Sample 51


infraspecific_name: strain=Clinical Sample 52


infraspecific_name: strain=Clinical Sample 50


infraspecific_name: strain=Clinical Sample 48


infraspecific_name: strain=Clinical Sample 49


infraspecific_name: strain=Clinical Sample 47


infraspecific_name: strain=South Bronx Hotel Sample 4


infraspecific_name: strain=Clinical Sample 46


infraspecific_name: strain=Clinical Sample 45


infraspecific_name: strain=Clinical Sample 42


infraspecific_name: strain=Clinical Sample 43


infraspecific_name: strain=Clinical Sample 44


infraspecific_name: strain=Clinical Sample 41


infraspecific_name: strain=Clinical Sample 37


infraspecific_name: strain=Clinical Sample 39


infraspecific_name: strain=Clinical Sample 40


infraspecific_name: strain=South Bronx Hotel Sample 3


infraspecific_name: strain=Clinical Sample 36


infraspecific_name: strain=Clinical Sample 33


infraspecific_name: strain=Clinical Sample 35


infraspecific_name: strain=Clinical Sample 34


infraspecific_name: strain=Clinical Sample 32


infraspecific_name: strain=Clinical Sample 31


infraspecific_name: strain=Clinical Sample 29


infraspecific_name: strain=Clinical Sample 28


infraspecific_name: strain=South Bronx Hotel Sample 1


infraspecific_name: strain=Clinical Sample 27


infraspecific_name: strain=Clinical Sample 26


infraspecific_name: strain=Clinical Sample 23


infraspecific_name: strain=Clinical Sample 25


infraspecific_name: strain=Clinical Sample 24


infraspecific_name: strain=Clinical Sample 21


infraspecific_name: strain=Clinical Sample 22


infraspecific_name: strain=Clinical Sample 19


infraspecific_name: strain=Clinical Sample 18


infraspecific_name: strain=Clinical Sample 20


infraspecific_name: strain=Clinical Sample 15


infraspecific_name: strain=Clinical Sample 17


infraspecific_name: strain=Clinical Sample 16


infraspecific_name: strain=South Bronx Hotel Sample 2


infraspecific_name: strain=Clinical Sample 14


infraspecific_name: strain=Clinical Sample 13


infraspecific_name: strain=Clinical Sample 12


infraspecific_name: strain=Clinical Sample 11


infraspecific_name: strain=East Bronx Environmemtal sample 1


infraspecific_name: strain=East Bronx Environmemtal sample 2


infraspecific_name: strain=Clinical Sample 9


infraspecific_name: strain=Clinical Sample 10


infraspecific_name: strain=Homeless Shelter sample 3


infraspecific_name: strain=Clinical Sample 8


infraspecific_name: strain=Clinical Sample 7


infraspecific_name: strain=Clinical Sample 6


infraspecific_name: strain=Clinical Sample 3


infraspecific_name: strain=Clinical Sample 5


infraspecific_name: strain=Clinical Sample 2


infraspecific_name: strain=Clinical Sample 4


infraspecific_name: strain=Clinical Sample 1


infraspecific_name: strain=East Bronx College


infraspecific_name: strain=Nursing Home Sample 1


infraspecific_name: strain=Homeless Shelter sample 1


infraspecific_name: strain=Homeless Shelter sample 2


organism_name: Legionella pneumophila subsp. pneumophila


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Enterococcus faecalis


asm_submitter: Walter Reed Army Institute of Research


organism_name: Campylobacter jejuni


infraspecific_name: strain=clinical isolate of L. monocytogenes


asm_submitter: Centers for Disease Control and Prevention


organism_name: Shigella flexneri


asm_submitter: Wadsworth Center / NYSDOH


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Give


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


asm_submitter: FDA/CFSAN


asm_submitter: Microbiological Diagnostics Unit


asm_submitter: Qujing Normal University

organism_name: Pseudomonas bijieensis


asm_submitter: The Fifth Affiliated Hospital of Guangzhou Medical University

organism_name: Citrobacter freundii


asm_submitter: Beijing university of technology

organism_name: Vreelandella venusta


asm_submitter: Henan Institute of Science and Technology

organism_name: Streptomyces sp. HU2014


asm_submitter: an eLibrary of Microbial Systematics and Genomics

organism_name: Conexibacter sp. S30A1


organism_name: Conexibacter sp. DBS9H8


asm_submitter: Sir Run Run Shaw Hospital, School of Medicine, Zhejiang University

organism_name: Salmonella enterica


asm_submitter: National Institute of Biotechnology

organism_name: Klebsiella ornithinolytica


asm_submitter: National Center for Biotechnology Information


organism_name: Enterococcus faecium


asm_submitter: Palacky University Olomouc

assembly_level: Scaffold

organism_name: Argonema antarcticum A004/B2

relation_to_type_material: assembly from type material


organism_name: Argonema galeatum A003/A1


asm_submitter: Sir Run Run Shaw Hospital

organism_name: Enterobacter kobei


asm_submitter: Center for Food Safety and Applied Nutrition


asm_submitter: University of Washington

isolate: CBIA

organism_name: Marinobacter sp.


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


asm_submitter: Centers for Disease Control and Prevention


asm_submitter: FDA

organism_name: Escherichia coli


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


asm_submitter: CDC


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Klebsiella pneumoniae


asm_submitter: University of Tennessee

organism_name: Pseudanabaena sp. Salubria-1


asm_submitter: Bacterial Special Pathogens Branch (CDC)

organism_name: Elizabethkingia anophelis


asm_submitter: Chulalongkorn University

organism_name: Sporolactobacillus mangiferae


organism_name: Elizabethkingia bruuniana


organism_name: Elizabethkingia ursingii


organism_name: Elizabethkingia meningoseptica


asm_submitter: Purdue University

organism_name: Moraxella oculi


asm_submitter: University of Naples Federico II

organism_name: Roseinatronobacter domitianus


asm_submitter: Institute of Oceanology, Chinese Academy of Sciences

organism_name: Actinomycetes bacterium


asm_submitter: Veterinary Research Institute

organism_name: Parasutterella secunda


organism_name: Bacteroides sp. ET71


organism_name: Phascolarctobacterium sp. ET69


organism_name: Succinatimonas hippei


organism_name: Phocaeicola plebeius


organism_name: Marseilla massiliensis


organism_name: Elizabethkingia miricola


organism_name: Mediterranea sp. ET5


asm_name: Hybrid

asm_submitter: Tokyo Medical and Dental University

organism_name: Klebsiella pneumoniae


excluded_from_refseq: RefSeq annotation failed

organism_name: Enterobacter cloacae


organism_name: Bacteroides caecicola


organism_name: Klebsiella quasipneumoniae


asm_submitter: University of Exeter

organism_name: Xanthomonas nasturtii


asm_submitter: Technische Universitaet Muenchen

organism_name: Parasaccharibacter sp. TMW2.1882


organism_name: Parasaccharibacter sp. TMW2.1890


infraspecific_name: strain=TMW 2.1891

organism_name: Parasaccharibacter sp. TMW 2.1891


excluded_from_refseq: contaminated; unverified source organism

infraspecific_name: strain=TMW 2.1886

organism_name: Parasaccharibacter sp. TMW 2.1886


infraspecific_name: strain=TMW 2.1884

organism_name: Parasaccharibacter sp. TMW 2.1884


asm_submitter: University of Jos

organism_name: Lysinibacillus sp. BPa_S21


organism_name: Lysinibacillus sp. Bpr_S20


asm_submitter: Guangxi Zhuang Autonomous Region Center for Disease Control and Prevention

organism_name: Vibrio parahaemolyticus


excluded_from_refseq: contaminated


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


asm_submitter: New Jersey Department of Agriculture


organism_name: Salmonella enterica


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica


asm_submitter: Health Protection Agency

organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Chester


asm_submitter: National Center for Biotechnology Information

isolate: bacteria

organism_name: Klebsiella pneumoniae


organism_name: Staphylococcus aureus


organism_name: Enterococcus faecium


organism_name: Citrobacter freundii


organism_name: Pseudomonas aeruginosa


organism_name: Shigella boydii


organism_name: Shigella sonnei


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


asm_submitter: CDC


organism_name: Klebsiella oxytoca


excluded_from_refseq: contaminated; from large multi-isolate project


asm_submitter: FDA


asm_submitter: US Food and Drug Administration


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Clostridium botulinum


organism_name: Salmonella enterica subsp. enterica serovar Anatum


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


organism_name: Acinetobacter baumannii


organism_name: Escherichia coli


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Newport


asm_submitter: FDA/CFSAN

organism_name: Listeria monocytogenes


organism_name: Shigella dysenteriae


organism_name: Staphylococcus aureus


organism_name: Klebsiella pneumoniae


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Pseudomonas aeruginosa


organism_name: Citrobacter freundii


organism_name: Enterococcus faecium


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Shigella flexneri


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


organism_name: Acinetobacter baumannii


asm_submitter: Center for Food Safety and Applied Nutrition


asm_submitter: Nutrition &Health Technology Center

infraspecific_name: strain=VHProbi V38

organism_name: Lactiplantibacillus plantarum


asm_submitter: AgResearch

organism_name: Faecalibacterium sp. I4-1-79


organism_name: Faecalibacterium sp. I4-3-84


organism_name: Faecalibacterium sp. I3-3-89


organism_name: Faecalibacterium sp. I3-3-33


organism_name: Faecalibacterium sp. I2-3-92


organism_name: Faecalibacterium sp. IP-3-29


organism_name: Faecalibacterium sp. IP-1-18


organism_name: Escherichia coli


organism_name: Campylobacter coli


organism_name: Salmonella enterica


infraspecific_name: strain=HTF-F

organism_name: Faecalibacterium wellingii


asm_submitter: University of the West of England

organism_name: Brenneria tiliae


organism_name: Pseudomonas aeruginosa


asm_submitter: Nantong university

organism_name: Klebsiella pneumoniae


asm_submitter: University of Maryland Baltimore

organism_name: Fenollaria massiliensis


organism_name: Ezakiella coagulans


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: University College Cork

organism_name: Lactiplantibacillus plantarum


asm_submitter: Karolinska Institutet

infraspecific_name: strain=DSM 21332

organism_name: Shewanella corallii


infraspecific_name: strain=CCUG 57102

organism_name: Shewanella fodinae


infraspecific_name: strain=CCUG 62411

organism_name: Shewanella litorisediminis


infraspecific_name: strain=JCM 12193

organism_name: Shewanella aquimarina


organism_name: Campylobacter jejuni


asm_submitter: Istituto Zooprofilattico Sperimentale dell'Umbria e delle Marche

organism_name: Listeria monocytogenes


organism_name: Escherichia coli


organism_name: Vibrio alginolyticus


organism_name: Vibrio cholerae


organism_name: Salmonella enterica


organism_name: Acinetobacter baumannii


organism_name: Shigella flexneri


organism_name: Enterobacter hormaechei


organism_name: Klebsiella pneumoniae


organism_name: Salmonella enterica subsp. enterica serovar Eko


asm_submitter: National Center for Biotechnology Information

organism_name: Salmonella enterica subsp. enterica serovar Typhi str. CT18


asm_submitter: CDC

organism_name: Shigella sonnei


organism_name: Vibrio parahaemolyticus


organism_name: Vibrio vulnificus


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Escherichia coli


asm_submitter: US Food and Drug Administration


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Campylobacter jejuni


asm_submitter: General Hospital


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


asm_submitter: Hebrew University of Jerusalem

organism_name: Trichodesmium sp. MAG_R04


organism_name: Trichodesmium sp. MAG_R03


organism_name: Trichodesmium sp. MAG_R01


organism_name: Trichodesmium sp. MAG_R02


organism_name: Salmonella enterica subsp. enterica serovar Typhi str. CT18


organism_name: Klebsiella pneumoniae


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: Centers for Disease Control and Prevention


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar Eastbourne


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


asm_submitter: Vet-LIRN-CVM-FDA

isolate: Canis lupus familiaris

organism_name: Escherichia coli


organism_name: Salmonella enterica


isolate: Sus scrofa domesticus


isolate: equus ferus caballus


isolate: Equus ferus caballus

organism_name: Salmonella enterica subsp. enterica serovar Muenchen


isolate: Felis catus


organism_name: Salmonella enterica subsp. enterica serovar Javiana


isolate: Pogona species


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Typhi str. CT18


organism_name: Pseudomonas aeruginosa


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Staphylococcus aureus


asm_submitter: Peking University People's Hospital

organism_name: Acinetobacter baumannii


asm_submitter: Center for Food Safety and Applied Nutrition


organism_name: Morganella morganii


organism_name: Shigella flexneri


organism_name: Enterobacter cloacae


organism_name: Citrobacter koseri


organism_name: Klebsiella pneumoniae


organism_name: Escherichia coli


organism_name: Citrobacter freundii


organism_name: Citrobacter farmeri


organism_name: Salmonella enterica


organism_name: Klebsiella aerogenes


organism_name: Shigella sonnei


organism_name: Campylobacter jejuni


organism_name: Citrobacter amalonaticus


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Klebsiella oxytoca


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


asm_submitter: Cornell University

organism_name: Actinomyces sp. 217892


organism_name: Actinomyces sp. 187325


organism_name: Actinomyces sp. AC-20-1


organism_name: Actinomyces cricetomys (nom. nud.)


organism_name: Salmonella enterica subsp. enterica serovar Liverpool


asm_submitter: Food Industry Research and Development Institute

organism_name: Roseburia hominis


asm_submitter: IPLA-CSIC

organism_name: Ruminococcus bromii


asm_submitter: Ocean University of China

excluded_from_refseq: genus undefined

organism_name: Prolixibacteraceae bacterium JC049


asm_submitter: Hebei Agriculture University

organism_name: Bacillus subtilis


asm_submitter: University of Wisconsin-Milwaukee

organism_name: Escherichia coli


asm_submitter: GBRC

infraspecific_name: strain=GBRCKU

organism_name: Pediococcus pentosaceus


asm_submitter: Chinese Center for Disease Control and Prevention

organism_name: Aeromicrobium wangtongii


asm_submitter: Gyeongsang National University Hospital

organism_name: Parabacteroides leei


organism_name: Aeromicrobium duanguangcaii


asm_submitter: SciBear OU

organism_name: Actinotalea alkalitolerans


asm_submitter: Walter Reed Army Institute of Research

organism_name: Klebsiella pneumoniae


excluded_from_refseq: annotation fails completeness check

infraspecific_name: strain=KUGBRC

organism_name: Lactiplantibacillus plantarum


asm_submitter: Northwest Institute of Eco-Environment and Resources Chinese Academy of Sciences

organism_name: Deinococcus sp. QL22


asm_submitter: Research Center of Biotechnology RAS

infraspecific_name: strain=MIR

organism_name: Methylococcus capsulatus


asm_submitter: The Independent Schools Foundation Academy

organism_name: Gulosibacter sp. ACHW.36C


asm_submitter: Northwest A&F University


asm_submitter: Nanjing Agricultural University


asm_submitter: Yangzhou University


asm_submitter: Fujita Health University School of Medicine


asm_submitter: Chinese Academy of Tropical Agricultural Sciences

organism_name: Streptomyces lavenduligriseus


asm_submitter: Kasetsart University

organism_name: Limosilactobacillus fermentum


asm_submitter: Guangxi University for Nationalities

organism_name: Marivita sp. GX14005


organism_name: Pseudomonas sp. GX19020


organism_name: Parvivirga hydrogeniphila


asm_submitter: CDC

organism_name: Shigella sonnei


organism_name: Shigella flexneri


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Salmonella enterica


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: FDA/CFSAN

organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar London


organism_name: Shigella sonnei


organism_name: Shigella flexneri


asm_submitter: Fujian Agriculture and Forestry University

organism_name: Bacillus velezensis


asm_submitter: University of Birmingham

infraspecific_name: strain=Noodlococcus

organism_name: Kocuria rhizophila


asm_submitter: World Institute of Kimchi

organism_name: Brachybacterium kimchii


asm_submitter: Sir Run Run Shaw Hospital, Collage of Medicine, Zhejiang University

organism_name: Klebsiella pneumoniae


organism_name: Klebsiella quasipneumoniae


asm_submitter: Chinese Academy of Sciences


asm_submitter: Shandong University at Weihai

organism_name: Agarivorans sp. B2Z047


asm_submitter: University Hospital Muenster

organism_name: Burkholderia multivorans


organism_name: Burkholderia vietnamiensis


asm_submitter: Zhejiang University

organism_name: Staphylococcus aureus


asm_submitter: Guangdong Academy of Agricultural Sciences

organism_name: Enterococcus hirae


asm_submitter: Institute of Microbiology, Chinese Academy of Sciences

organism_name: Alcaligenes aquatilis


annotation_name: Annotation submitted by Institut Agro Dijon

annotation_provider: Institut Agro Dijon

asm_submitter: Institut Agro Dijon

organism_name: Fibrobacter sp. HC4


annotation_name: Annotation submitted by University Malaysia Sabah

annotation_provider: University Malaysia Sabah

asm_submitter: University Malaysia Sabah

organism_name: Bacillus altitudinis


asm_submitter: Beijing Forestry University

organism_name: Luteimonas galliterrae


asm_submitter: Bacterial Special Pathogens Branch (CDC)

organism_name: Elizabethkingia miricola


organism_name: Elizabethkingia meningoseptica


asm_submitter: Walter Reed Army Institute of Research


asm_submitter: Shenyang Agricultural University

organism_name: Enterobacter bugandensis


asm_submitter: Central China Normal University

organism_name: Paenibacillus polymyxa


organism_name: Burkholderia cenocepacia


organism_name: Burkholderia cepacia


asm_submitter: Beijing Tsinghua Changgung Hospital

organism_name: Citrobacter freundii


organism_name: Citrobacter portucalensis


asm_submitter: beijing

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Salmonella sp. WGH-01


asm_submitter: INIA

infraspecific_name: strain=IVIA 3978

organism_name: Xanthomonas arboricola pv. corylina


infraspecific_name: strain=CFBP 1846


infraspecific_name: strain=IVIA 2626.1

organism_name: Xanthomonas arboricola pv. pruni


infraspecific_name: strain=IVIA 1317

organism_name: Xanthomonas arboricola pv. juglandis


infraspecific_name: strain=IVIA 2499


infraspecific_name: strain=CITA 33


asm_submitter: Jiangsu Wecare Biotechnology Co., Ltd

organism_name: Bifidobacterium animalis subsp. lactis


asm_submitter: UNRC

organism_name: Bradyrhizobium sp. C-145


asm_submitter: University of Zurich

organism_name: Enterococcus hirae


organism_name: Enterococcus faecium


organism_name: Enterococcus faecalis


organism_name: Enterococcus durans


organism_name: Enterococcus gallinarum


asm_submitter: Yangzhou University

organism_name: Enterobacter roggenkampii


organism_name: Enterobacter hormaechei


asm_submitter: Institute of Bioresources and Sustainable Development, Regional Centre, Sikkim

organism_name: Pseudomonas sp. HS6


annotation_name: Annotation submitted by Probiomics group

annotation_provider: Probiomics group

asm_submitter: Probiomics group - Department of Molecular Biology and Genetics, Democritus University of Thrace

organism_name: Lacticaseibacillus paracasei


asm_submitter: USDA FSIS

excluded_from_refseq: from large multi-isolate project

organism_name: Campylobacter jejuni


asm_submitter: FDA


asm_submitter: University of Tuebingen

infraspecific_name: strain=KNN 49.3e

organism_name: Amycolatopsis thermalba


asm_submitter: AuHui Polytechnic University

organism_name: Streptomyces fradiae


asm_submitter: Universidad Nacional Autonoma de Mexico

organism_name: Escherichia coli


organism_name: Campylobacter coli


asm_submitter: Centers for Disease Control and Prevention


organism_name: Campylobacter upsaliensis


asm_submitter: The University of Hong Kong

organism_name: Candidatus Hydrogenedentota bacterium


asm_submitter: Sun Yat-Sen University

organism_name: Actinomycetota bacterium


excluded_from_refseq: derived from metagenome; genus undefined

group: archaea

organism_name: Candidatus Parvarchaeota archaeon


organism_name: Patescibacteria group bacterium


organism_name: Candidatus Martarchaeota archaeon


organism_name: Candidatus Babelota bacterium


organism_name: Thermoplasmatota archaeon


organism_name: Deltaproteobacteria bacterium


organism_name: Chloroflexota bacterium


organism_name: Bacillota bacterium


organism_name: Campylobacterota bacterium


organism_name: Nitrososphaerota archaeon


asm_submitter: National Yang Ming Chiao Tung University

organism_name: Klebsiella pneumoniae


asm_submitter: Ocean University of China

organism_name: Salmonella enterica subsp. enterica


asm_submitter: Murdoch University

organism_name: Mesorhizobium opportunistum


asm_submitter: Chinese Academy of Sciences

organism_name: Sphingomonas glaciei


asm_submitter: Children's Hospital, Zhejiang University School of Medicine

isolate: cerebral abscess

organism_name: Streptococcus pyogenes


asm_submitter: Xinjiang Medical University School of Basic Medical Sciences

organism_name: Pseudomonas aeruginosa


organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


asm_submitter: Project MUSA, H2020, ID 727624

organism_name: Pseudomonas chlororaphis subsp. piscium


asm_submitter: The University of Adelaide

organism_name: Nicoliella spurrieriana


organism_name: Apilactobacillus apisilvae


organism_name: Bombilactobacillus thymidiniphilus


organism_name: Bombilactobacillus folatiphilus


organism_name: Patescibacteria group bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Candidatus Martarchaeota archaeon


organism_name: Thermoplasmatota archaeon


organism_name: Candidatus Parvarchaeota archaeon


organism_name: Gammaproteobacteria bacterium


organism_name: Thermotogae bacterium


organism_name: Acidobacteriota bacterium


organism_name: Chloroflexota bacterium


organism_name: Cyanobacteriota bacterium


organism_name: Actinomycetota bacterium


organism_name: Bacillota bacterium


organism_name: Nitrososphaerota archaeon


organism_name: Vulcanimicrobiota bacterium


organism_name: Bacteroidota bacterium


organism_name: Nitrospirota bacterium


excluded_from_refseq: derived from metagenome

organism_name: Deinococcus sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined


organism_name: bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Thermoleophilia bacterium


organism_name: Flavobacteriales bacterium


organism_name: Fimbriimonadaceae bacterium


organism_name: Ignavibacteria bacterium


organism_name: Anaerolineae bacterium


organism_name: Ignavibacteriaceae bacterium


organism_name: Anaerolineales bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Candidatus Dadabacteria bacterium


organism_name: Candidatus Babelota bacterium


organism_name: Myxococcales bacterium


organism_name: Gemmatimonadales bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Patescibacteria group bacterium


organism_name: Phycisphaerales bacterium


organism_name: Pirellulaceae bacterium


organism_name: Thermoguttaceae bacterium


organism_name: Paracoccaceae bacterium


organism_name: Burkholderiaceae bacterium


organism_name: Verrucomicrobiota bacterium


asm_submitter: University of Zurich

organism_name: Enterococcus faecium


asm_submitter: University of Jos

organism_name: Burkholderia sp.


organism_name: Enterococcus hirae


organism_name: Olivibacter sp. UJ_SKK_5.1


organism_name: Staphylococcus aureus


asm_submitter: Northern Arizona University

organism_name: Burkholderia pseudomallei


organism_name: Enterococcus faecalis


asm_submitter: University Hospital Muenster

organism_name: Burkholderia multivorans


asm_submitter: Han laboratory, Department of Periodontics, Case Western Reserve University

excluded_from_refseq: unverified source organism

organism_name: Fusobacterium nucleatum YWH7054


organism_name: Fusobacterium nucleatum YWH7053


organism_name: Fusobacterium nucleatum YWH7055


asm_submitter: Northumbria University

infraspecific_name: strain=DSM 45201

organism_name: Modestobacter marinus


organism_name: Fusobacterium nucleatum YWH7056


asm_submitter: ETH Zurich


organism_name: Fusobacterium nucleatum YWH7199


asm_submitter: University Malaysia Sabah

organism_name: Microbacterium sp. ER1


asm_submitter: The University of Hong Kong

organism_name: Gammaproteobacteria bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Burkholderiales bacterium


organism_name: Rhodocyclaceae bacterium


organism_name: Burkholderiaceae bacterium


organism_name: Sphingomonadaceae bacterium


organism_name: Pseudorhodoplanes sp.


organism_name: Pararhodobacter sp.


organism_name: Hyphomicrobiaceae bacterium


organism_name: Hyphomonadaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Planctomycetota bacterium


organism_name: Phycisphaerae bacterium


organism_name: Phycisphaerales bacterium


organism_name: Patescibacteria group bacterium


organism_name: Candidatus Kuenenia stuttgartensis


organism_name: Candidatus Omnitrophota bacterium


organism_name: Myxococcales bacterium


organism_name: Myxococcota bacterium


organism_name: Candidatus Hydrogenedentota bacterium


organism_name: bacterium


organism_name: Anaerolineae bacterium


organism_name: Gemmatimonadales bacterium


organism_name: Caldilinea sp.


organism_name: Caldilineaceae bacterium


organism_name: Flavobacteriales bacterium


organism_name: Anaerolineales bacterium


organism_name: Acidobacteriota bacterium


organism_name: Vicinamibacteraceae bacterium


organism_name: Vicinamibacteria bacterium


organism_name: Thermoanaerobaculia bacterium


organism_name: Bryobacteraceae bacterium


organism_name: Bryobacterales bacterium


asm_submitter: National Center for Biotechnology Information

organism_name: Escherichia coli


organism_name: Klebsiella oxytoca


organism_name: Escherichia coli O25b:H4-ST131


asm_submitter: US Food and Drug Administration

isolate: Meleagris gallopavo

organism_name: Salmonella enterica


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Pseudomonas aeruginosa


asm_submitter: FDA


asm_submitter: CDC


isolate: Culture


organism_name: Enterobacter hormaechei subsp. xiangfangensis


asm_submitter: Health Protection Agency


organism_name: Shigella flexneri


isolate: Dairy feces using a selective protocol for ESBL/AmpC


organism_name: Vibrio cholerae


organism_name: Klebsiella pneumoniae


isolate: Hospitalised patient

organism_name: Enterococcus faecium


organism_name: Shigella sonnei


organism_name: Enterococcus faecalis


organism_name: Salmonella enterica subsp. enterica serovar Typhi


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Derby


asm_submitter: LNCC

organism_name: Pseudomonadota bacterium


organism_name: Bacteroidota bacterium


organism_name: Synergistota bacterium


organism_name: Bacillota bacterium


organism_name: Actinomycetes bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


asm_submitter: Wadsworth Center / NYSDOH

organism_name: Escherichia coli


organism_name: Acidobacteriota bacterium


organism_name: Enterococcus faecium


organism_name: Enterobacter hormaechei


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Chloroflexota bacterium


organism_name: Fusobacteriota bacterium


organism_name: Salmonella enterica subsp. enterica serovar Chailey


organism_name: Pseudomonadota bacterium


organism_name: Bacteroidota bacterium


organism_name: Candidatus Parcubacteria bacterium


organism_name: Bacillota bacterium


organism_name: Actinomycetes bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Armatimonadota bacterium


organism_name: Candidatus Cloacimonadota bacterium


excluded_from_refseq: unverified source organism; derived from metagenome; genus undefined


organism_name: Candidatus Sumerlaeota bacterium


organism_name: Spirochaetota bacterium


organism_name: Methanobacteriota archaeon


excluded_from_refseq: contaminated; derived from metagenome; genus undefined


organism_name: Elusimicrobiota bacterium


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Bacteroidota bacterium


organism_name: Bacillota bacterium


organism_name: Actinomycetes bacterium


organism_name: Pseudomonadota bacterium


organism_name: Vibrio cholerae


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Methanobacteriota archaeon


organism_name: Acinetobacter baumannii


organism_name: Cyanobacteria bacterium OH_SFB_222


organism_name: Escherichia coli


organism_name: Salmonella enterica


organism_name: Deferribacteres bacterium


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Chloroflexota bacterium


organism_name: Cyanobacteria bacterium OH_SFB_17


organism_name: Bacteroidota bacterium


organism_name: Bacillota bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Pseudomonadota bacterium


organism_name: Actinomycetes bacterium


organism_name: Spirochaetota bacterium


organism_name: Enterococcus faecium


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Candidatus Parcubacteria bacterium


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Staphylococcus pseudintermedius


organism_name: Planctomycetota bacterium


organism_name: Salmonella enterica


organism_name: Nanobdellota archaeon


organism_name: Salmonella enterica subsp. enterica serovar Panama


organism_name: Acinetobacter baumannii


organism_name: Candidatus Sumerlaeota bacterium


organism_name: Bacteroidota bacterium


organism_name: Bacillota bacterium


organism_name: Escherichia coli


organism_name: Verrucomicrobiota bacterium


organism_name: Pseudomonadota bacterium


organism_name: Salmonella enterica subsp. enterica serovar Livingstone


organism_name: Spirochaetota bacterium


organism_name: Elusimicrobiota bacterium


organism_name: Armatimonadota bacterium


asm_submitter: Vet-LIRN-CVM-FDA


organism_name: Salmonella enterica subsp. enterica serovar Muenster


organism_name: Methanobacteriota archaeon


organism_name: Synergistota bacterium


organism_name: Fusobacteriota bacterium


organism_name: Actinomycetes bacterium


organism_name: Enterococcus faecium


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Acinetobacter baumannii


organism_name: Bacillota bacterium


organism_name: Bacteroidota bacterium


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genus undefined


organism_name: Klebsiella pneumoniae


organism_name: Pseudomonas aeruginosa


organism_name: Klebsiella variicola


organism_name: Pseudomonadota bacterium


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Escherichia coli


organism_name: Escherichia coli O157:H7


organism_name: Shigella flexneri


organism_name: Spirochaetota bacterium


organism_name: Synergistota bacterium


organism_name: Methanobacteriota archaeon


organism_name: Actinomycetes bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Candidatus Avelusimicrobium faecicola


organism_name: Verrucomicrobiota bacterium


organism_name: Salmonella enterica


organism_name: Bacillota bacterium


organism_name: Bacteroidota bacterium


organism_name: Klebsiella pneumoniae


organism_name: Salmonella enterica subsp. enterica serovar Tennessee


organism_name: Enterobacter cloacae


organism_name: Citrobacter freundii


organism_name: Pseudomonadota bacterium


organism_name: Escherichia coli


organism_name: Chloroflexota bacterium


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Klebsiella aerogenes


organism_name: Escherichia coli O157:H7


organism_name: Citrobacter amalonaticus


organism_name: Actinomycetes bacterium


organism_name: Salmonella enterica subsp. enterica serovar London


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Methanobacteriota archaeon


organism_name: Bacillota bacterium


organism_name: Bacteroidota bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Cyanobacteria bacterium OH_CBB_238


organism_name: Acidobacteriota bacterium


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Matopeni


organism_name: Klebsiella michiganensis


organism_name: Klebsiella oxytoca


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Albany


asm_submitter: Center for Food Safety and Applied Nutrition


organism_name: Pseudomonadota bacterium


organism_name: Klebsiella pneumoniae


organism_name: Actinomycetes bacterium


organism_name: Escherichia coli O157:H7


organism_name: Shigella flexneri


organism_name: Bacillota bacterium


organism_name: Vibrio cholerae


organism_name: Bacteroidota bacterium


organism_name: Acinetobacter baumannii


organism_name: Methanobacteriota archaeon


organism_name: Salmonella enterica


organism_name: Fibrobacterota bacterium


organism_name: Planctomycetota bacterium


organism_name: Cyanobacteria bacterium OH_PBB_10


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Escherichia coli


organism_name: Enterococcus faecalis


organism_name: Pseudomonadota bacterium


organism_name: Cyanobacteria bacterium OH_CFB_184


organism_name: Actinomycetes bacterium


organism_name: Escherichia coli O157:H7


organism_name: Citrobacter freundii


organism_name: Bacillota bacterium


organism_name: Acidobacteriota bacterium


organism_name: Bacteroidota bacterium


organism_name: Chloroflexota bacterium


organism_name: Cyanobacteria bacterium OH_CDB_20


organism_name: Salmonella enterica


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Acinetobacter baumannii


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Escherichia coli


organism_name: Verrucomicrobiota bacterium


organism_name: Pseudomonadota bacterium


organism_name: Planctomycetota bacterium


organism_name: Actinomycetes bacterium


organism_name: Gemmatimonadota bacterium


organism_name: Methanobacteriota archaeon


organism_name: Bacillota bacterium


organism_name: Acidobacteriota bacterium


organism_name: Bacteroidota bacterium


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Listeria monocytogenes


organism_name: Fusobacteriota bacterium


organism_name: Salmonella enterica


organism_name: Fibrobacterota bacterium


organism_name: Candidatus Cloacimonadota bacterium


organism_name: Nanobdellota archaeon


organism_name: Escherichia coli


organism_name: Cyanobacteria bacterium OH_PDB_230


organism_name: Spirochaetota bacterium


organism_name: Candidatus Goldiibacteriota bacterium


organism_name: Pseudomonadota bacterium


organism_name: Shigella sonnei


organism_name: Actinomycetes bacterium


organism_name: Bacillota bacterium


organism_name: Escherichia coli O157:H7


organism_name: Escherichia coli O141:H32


organism_name: Bacteroidota bacterium


organism_name: Armatimonadota bacterium


organism_name: Chloroflexota bacterium


organism_name: Salmonella enterica


organism_name: Verrucomicrobiota bacterium


organism_name: Acinetobacter baumannii


organism_name: Klebsiella pneumoniae


organism_name: Escherichia coli


organism_name: Methanobacteriota archaeon


organism_name: Synergistota bacterium


organism_name: Spirochaetota bacterium


organism_name: Pseudomonadota bacterium


organism_name: Escherichia coli O6:H31


organism_name: Actinomycetes bacterium


organism_name: Bacillota bacterium


organism_name: Enterobacter hormaechei


organism_name: Klebsiella planticola


organism_name: Shigella flexneri


organism_name: Bacteroidota bacterium


organism_name: Acidobacteriota bacterium


organism_name: bacterium


organism_name: Armatimonadota bacterium


organism_name: Planctomycetota bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Salmonella enterica


organism_name: Listeria monocytogenes


organism_name: Methanobacteriota archaeon


organism_name: Chloroflexota bacterium


organism_name: Pseudomonadota bacterium


organism_name: Escherichia coli


organism_name: Actinomycetes bacterium


organism_name: Candidatus Parcubacteria bacterium


organism_name: Cyanobacteria bacterium OH_CBrB_359


organism_name: Gemmatimonadota bacterium


organism_name: Bacillota bacterium


organism_name: Bacteroidota bacterium


organism_name: Acidobacteriota bacterium


organism_name: Shigella flexneri


asm_submitter: FDA/CFSAN


organism_name: Escherichia coli O157:H7


organism_name: Spirochaetota bacterium


organism_name: Cyanobacteria bacterium OH_CDB_58


organism_name: Fibrobacterota bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Salmonella enterica


organism_name: Cyanobacteria bacterium OH_HBrB_170


organism_name: Pseudomonadota bacterium


organism_name: Escherichia coli


organism_name: Methanobacteriota archaeon


organism_name: Actinomycetes bacterium


organism_name: Chloroflexota bacterium


organism_name: Candidatus Parcubacteria bacterium


organism_name: Bacillota bacterium


organism_name: Bacteroidota bacterium


organism_name: Planctomycetota bacterium


organism_name: Candidatus Cloacimonadota bacterium


organism_name: Escherichia coli O157:H7


organism_name: Synergistota bacterium


organism_name: Cyanobacteria bacterium OH_HBrB_202


isolate: bacterium

organism_name: Vulcanimicrobiota bacterium


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica


organism_name: Shigella flexneri


organism_name: Pseudomonadota bacterium


organism_name: Escherichia coli


organism_name: Verrucomicrobiota bacterium


organism_name: Actinomycetes bacterium


organism_name: Methanobacteriota archaeon


organism_name: Klebsiella pneumoniae


organism_name: Bacillota bacterium


organism_name: Bacteroidota bacterium


organism_name: Enterobacter cloacae


organism_name: Cyanobacteria bacterium OH_HDB_209


organism_name: Cyanobacteria bacterium OH_HBrB_90


organism_name: Klebsiella aerogenes


organism_name: Citrobacter freundii


organism_name: Spirochaetota bacterium


organism_name: Cyanobacteria bacterium OH_HFB_136


organism_name: Synergistota bacterium


organism_name: Cyanobacteria bacterium OH_PDB_112


organism_name: Pseudomonadota bacterium


organism_name: Candidatus Parcubacteria bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Actinomycetes bacterium


organism_name: Escherichia coli


organism_name: Klebsiella pneumoniae


organism_name: Bacillota bacterium


organism_name: Bacteroidota bacterium


organism_name: Methanobacteriota archaeon


excluded_from_refseq: unverified source organism; derived from metagenome; fragmented assembly; genus undefined


organism_name: Candidatus Cloacimonadota bacterium


organism_name: Chloroflexota bacterium


organism_name: Fibrobacterota bacterium


organism_name: Cyanobacteria bacterium OH_SDB_54


organism_name: Spirochaetota bacterium


organism_name: Salmonella enterica


organism_name: Enterococcus faecium


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Paratyphi C


organism_name: Salmonella enterica subsp. enterica serovar Paratyphi A


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Escherichia coli


asm_submitter: New Jersey Department of Agriculture


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Paratyphi B


organism_name: Klebsiella pneumoniae


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Shigella dysenteriae


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: Utah Public Health Laboratory Infectious Disease submission group

organism_name: Klebsiella aerogenes


organism_name: Acinetobacter baumannii


organism_name: Salmonella enterica


asm_submitter: GenomeTrakr Project: Washington State Department of Health

organism_name: Vibrio parahaemolyticus


organism_name: Clostridioides difficile


organism_name: Enterobacter kobei


organism_name: Citrobacter freundii


asm_submitter: Public Health Agency of Canada

organism_name: Salmonella enterica subsp. enterica


asm_submitter: National Center for Biotechnology Information


isolate: Homo sepiens


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Staphylococcus pseudintermedius


organism_name: Enterococcus faecium


asm_submitter: Centers for Disease Control and Prevention


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


asm_submitter: US Food and Drug Administration


organism_name: Klebsiella pneumoniae


asm_submitter: FDA


isolate: monofasisk

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


asm_submitter: CDC


asm_submitter: Health Protection Agency


organism_name: Shigella sonnei


asm_submitter: NJ DOH Public Health Laboratories microbial pathogen submission group


organism_name: Shigella flexneri


organism_name: Klebsiella aerogenes


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica


isolate: outbreak case 1


organism_name: Salmonella enterica subsp. enterica serovar Cerro


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


isolate: Enterobacter kobei

organism_name: Enterobacter kobei


organism_name: Salmonella enterica subsp. enterica serovar Dublin


asm_submitter: Centers for Disease Control, Taiwan

organism_name: Neisseria meningitidis


asm_submitter: Huazhong Agricultural University

organism_name: Streptococcus suis


organism_name: Streptococcus gallolyticus


organism_name: Enterococcus faecalis


asm_submitter: The Federal Research Centre "Fundamentals of Biotechnology" of the Russian Academy of Sciences

organism_name: Lacticaseibacillus paracasei


organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


asm_submitter: USDA FSIS


organism_name: Escherichia coli


asm_submitter: UK Health Security Agency


asm_submitter: Ningbo First Hospital


organism_name: Klebsiella pneumoniae


asm_submitter: University of Gothenburg - CCUG

infraspecific_name: strain=CCUG 17915

organism_name: Neisseria perflava


organism_name: Salmonella enterica


asm_submitter: Shandong University

organism_name: Algibacter sp. L4_22


asm_submitter: University of KwaZulu-Natal (UKZN), South Africa


asm_submitter: National Center for Biotechnology Information


asm_submitter: Sun Yat-Sen University

organism_name: Patescibacteria group bacterium


organism_name: Candidatus Martarchaeota archaeon


organism_name: Candidatus Omnitrophota bacterium


organism_name: Chloroflexota bacterium


organism_name: Candidatus Parvarchaeota archaeon


organism_name: Armatimonadota bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Bacillota bacterium


organism_name: Acidobacteriota bacterium


organism_name: Bacteroidota bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Candidatus Pacearchaeota archaeon


organism_name: Nitrospirota bacterium


organism_name: Thermotogae bacterium


organism_name: Nitrososphaerota archaeon


organism_name: Thermoplasmatota archaeon


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Actinomycetota bacterium


organism_name: Campylobacter coli


asm_submitter: ANSES

organism_name: Shewanella sp. 10B


organism_name: Salmonella enterica


organism_name: Shewanella sp. 8A


asm_submitter: Universiti Putra Malaysia

organism_name: Vibrio harveyi


organism_name: Escherichia coli


asm_submitter: CDC


asm_submitter: Aarhus University

organism_name: Pseudomonas nunensis


organism_name: Candidatus Martarchaeota archaeon


organism_name: Patescibacteria group bacterium


asm_submitter: National Institute for Communicable Disease Control and Prevention, China CDC

organism_name: Anaplasma phagocytophilum


organism_name: Cellulophaga sp. 20_2_10


organism_name: Campylobacter jejuni


asm_submitter: FDA


organism_name: bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Bacteroidota bacterium


organism_name: Acidobacteriota bacterium


organism_name: Nitrospirota bacterium


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Chloroflexota bacterium


organism_name: Bacillota bacterium


organism_name: Campylobacter coli


organism_name: Planctomycetota bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Actinomycetota bacterium


organism_name: Armatimonadota bacterium


organism_name: Nitrososphaerota archaeon


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Citrobacter cronae


organism_name: Enterobacter vonholyi


organism_name: Enterobacter roggenkampii


organism_name: Enterobacter kobei


excluded_from_refseq: unverified source organism; annotation fails completeness check


excluded_from_refseq: fragmented assembly


asm_submitter: Kuban State Agrarian University

organism_name: Loigolactobacillus coryniformis


organism_name: Lactobacillus johnsonii


organism_name: Acidobacteriota bacterium


organism_name: Bacteroidota bacterium


organism_name: Patescibacteria group bacterium


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Candidatus Omnitrophota bacterium


organism_name: Thermoplasmatota archaeon


organism_name: Gammaproteobacteria bacterium


organism_name: Chloroflexota bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Candidatus Pacearchaeota archaeon


organism_name: Candidatus Babelota bacterium


organism_name: Salmonella enterica


organism_name: Nitrososphaerota archaeon


organism_name: Bacillota bacterium


organism_name: Candidatus Martarchaeota archaeon


organism_name: Nitrospirota bacterium


organism_name: Candidatus Parvarchaeota archaeon


organism_name: Actinomycetota bacterium


asm_submitter: Centers for Disease Control, Taiwan

organism_name: Neisseria meningitidis


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Betaproteobacteria bacterium


organism_name: Acidobacteriota bacterium


organism_name: Patescibacteria group bacterium


organism_name: Thermoplasmatota archaeon


organism_name: Planctomycetota bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Deltaproteobacteria bacterium


asm_submitter: Shenzhen University

organism_name: Thermohalobaculum sediminis


asm_submitter: UNIVERSIDAD NACIONAL AUTONOMA DE MEXICO-CCG

organism_name: Acinetobacter sp. ANC5681


asm_submitter: Brigham and Women's Hospital, Harvard Medical School

organism_name: Vibrio cholerae


organism_name: Bacteroidota bacterium


organism_name: Candidatus Parvarchaeota archaeon


organism_name: Actinomycetota bacterium


organism_name: Bacillota bacterium


organism_name: Nitrospirota bacterium


organism_name: Chloroflexota bacterium


organism_name: Candidatus Babelota bacterium


organism_name: Candidatus Martarchaeota archaeon


organism_name: Candidatus Bathyarchaeota archaeon


organism_name: Deinococcus sp.


organism_name: Thermoplasmatota archaeon


organism_name: Planctomycetota bacterium


organism_name: Neisseria meningitidis


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Deltaproteobacteria bacterium


asm_submitter: FDA/CFSAN

organism_name: Listeria monocytogenes


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


organism_name: Salmonella enterica subsp. enterica serovar London


asm_submitter: Center for Food Safety and Applied Nutrition


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Brandenburg


organism_name: Salmonella enterica subsp. enterica serovar Blockley


organism_name: Escherichia coli


organism_name: Salmonella enterica


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Shigella flexneri


asm_submitter: FDA Center for Food Safety and Applied Nutrition


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: LNCC

organism_name: Bacteroidota bacterium


organism_name: Methanobacteriota archaeon


infraspecific_name: strain=NB2A 31_NB

organism_name: Roseburia intestinalis


organism_name: Parabacteroides distasonis


organism_name: Salmonella enterica subsp. enterica serovar Kiambu


organism_name: Bifidobacterium adolescentis


infraspecific_name: strain=14 LG

organism_name: Acidaminococcus intestini


organism_name: Phascolarctobacterium succinatutens


excluded_from_refseq: abnormal gene to sequence ratio; annotation fails completeness check; many frameshifted proteins

organism_name: Akkermansia muciniphila


organism_name: Flavonifractor plautii


asm_submitter: Project MUSA, H2020, ID 727624

organism_name: Bacillus velezensis


asm_submitter: INRAE

organism_name: Pseudomonas viridiflava


asm_submitter: Hunan Institute of Agricultural Biotechnology

organism_name: Streptomyces durmitorensis


asm_submitter: National Center for Biotechnology Information


organism_name: Salmonella enterica


asm_submitter: CDC


asm_submitter: FIOCRUZ

organism_name: Enterococcus faecium


asm_submitter: Centro de Ciencias Genomicas

organism_name: Acinetobacter baumannii


asm_submitter: Third Institute of Oceanography, Ministry of Natural Resources, P.R.China

infraspecific_name: strain=MCCC M21534

organism_name: Zunongwangia pacifica


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Chailey


asm_submitter: University of California, Berkeley

organism_name: Couchioplanes caeruleus


annotation_name: Annotation submitted by Ulm University

annotation_provider: Ulm University

asm_submitter: Ulm University

organism_name: Lactococcus petauri


organism_name: Campylobacter jejuni


asm_submitter: Centers for Disease Control and Prevention


organism_name: Campylobacter coli


organism_name: Escherichia coli


organism_name: Listeria monocytogenes


asm_submitter: National Institute of Public Health

infraspecific_name: strain=ANC 7086

organism_name: Acinetobacter amyesii


infraspecific_name: strain=ANC 4945


infraspecific_name: strain=ANC 5033


infraspecific_name: strain=ANC 5581


infraspecific_name: strain=ANC 7200


infraspecific_name: strain=ANC 5579


asm_submitter: FU berlin

organism_name: Streptococcus dysgalactiae subsp. equisimilis


asm_submitter: The University of Iowa

organism_name: Pseudomonas aeruginosa PA103


asm_submitter: IHU

organism_name: Bartonella bilalgolemi


organism_name: Staphylococcus aureus


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Shigella flexneri


organism_name: Salmonella enterica


asm_submitter: Chinese Academy of Tropical Agricultural Sciences

organism_name: Streptomyces sp. 43Y-GA-1


asm_submitter: National Agri-Food Biotechnology Institute

organism_name: Altererythrobacter sp. KTW20L


asm_submitter: Chinese Center for Disease Control and Prevention

organism_name: Nocardia sputi


organism_name: Streptomyces kronopolitis


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar London


organism_name: Craterilacuibacter sp. RT1T


asm_submitter: China Academy of Chinese Medical Sciences

organism_name: Streptomyces albidoflavus


organism_name: Aquiflexum sp. TKW24L


organism_name: Escherichia coli


asm_submitter: Hannam University

organism_name: Flagellimonas myxillae


asm_submitter: CDC


organism_name: Jejuia spongiicola


organism_name: Parendozoicomonas callyspongiae


asm_submitter: Chinese People's Liberation Army Center for Disease Control and Prevention

organism_name: Klebsiella michiganensis


organism_name: Ruegeria spongiae


organism_name: Flagellimonas spongiicola


organism_name: Bacillus altitudinis


organism_name: Proteus faecis


asm_submitter: Broad Institute

organism_name: Lysinibacillus sp. D4B2_S17


asm_submitter: Ahmadu Bello University

organism_name: Klebsiella pneumoniae


organism_name: Lysinibacillus fusiformis


organism_name: Lysinibacillus sp. D3C2_S12


organism_name: Lysinibacillus sp. D4A3_S15


organism_name: Lysinibacillus sp. D4A1_S13


organism_name: Bacillus paralicheniformis


organism_name: Bacillus velezensis


organism_name: Bacillus pumilus


excluded_from_refseq: contaminated; fragmented assembly

organism_name: Lysinibacillus sp. D4A2_S14


organism_name: Bacillus cereus


organism_name: Lysinibacillus sp. D1B2_S6


organism_name: Lysinibacillus sp. D4B1_S16


excluded_from_refseq: contaminated

organism_name: Lysinibacillus sp. D4B3_S18


organism_name: Peribacillus frigoritolerans


organism_name: Bacillus thuringiensis


asm_submitter: Rosselkhoznadzor The Russian State Center for Animal Feed and Drug Standardization and Quality

infraspecific_name: strain=ATCC 700025

organism_name: Histophilus somni


asm_submitter: Armed Forces Research Institute of Medical Sciences (AFRIMS)

organism_name: Campylobacter jejuni


excluded_from_refseq: annotation fails completeness check


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Give


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Escherichia coli


organism_name: Salmonella enterica


asm_submitter: FDA Center for Food Safety and Applied Nutrition

organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


organism_name: Shigella sonnei


organism_name: Shigella flexneri


asm_submitter: Changwon National University

infraspecific_name: strain=KEME 9005-016

organism_name: Brevundimonas albigilva


asm_submitter: Memorial University Of Newfoundland

organism_name: Vibrio sp. J383


asm_submitter: Hessian State Laboratory

organism_name: Streptococcus uberis


asm_submitter: Sir Run Run Shaw Hospital

organism_name: Klebsiella pneumoniae


asm_submitter: USDA FSIS

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


asm_submitter: Jiangsu University

organism_name: Enterococcus sp. YC2-6


organism_name: Weissella hellenica


organism_name: Pediococcus pentosaceus


organism_name: Lentilactobacillus buchneri


organism_name: Lactiplantibacillus plantarum


asm_submitter: The First Affiliated Hospital, School of Medicine, Zhejiang University

organism_name: Streptococcus agalactiae


asm_submitter: Leibniz Institute for Natural Product Research and Infection Biology

organism_name: Pseudomonas syringae


asm_submitter: Nanjing Normal University

infraspecific_name: strain=WLB 29

organism_name: Stappia sp. WLB 29


asm_submitter: The New Zealand Institute for Plant and Food Research Ltd.

infraspecific_name: strain=SCRI1043 DHAI2

organism_name: Pectobacterium atrosepticum


asm_submitter: Xinjiang University

organism_name: Bacillus zhangzhouensis


organism_name: Vreelandella olivaria


asm_submitter: Midwestern University

organism_name: Chromobacterium sp. IRSSSOUMB001


infraspecific_name: strain=SCRI1043 DHAI2Dcas


organism_name: Pectobacterium carotovorum subsp. carotovorum


infraspecific_name: strain=ICMP 9290

organism_name: Dickeya dadantii


organism_name: Pectobacterium polaris


organism_name: Pectobacterium brasiliense


organism_name: Pectobacterium parmentieri


infraspecific_name: strain=ICMP 1087

organism_name: Pantoea agglomerans


excluded_from_refseq: contaminated; fragmented assembly; genome length too large

infraspecific_name: strain=ICMP 11525


asm_submitter: Chinese Center for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


infraspecific_name: strain=bai 10-2


excluded_from_refseq: from large multi-isolate project


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Escherichia coli


asm_submitter: Chang Gung Memorial Hospital

organism_name: Staphylococcus lugdunensis


asm_submitter: The National University of Malaysia (UKM)

organism_name: Staphylococcus aureus


asm_submitter: DNASense ApS

organism_name: Pseudomonas abieticivorans


asm_submitter: CSIR-Institute of Himalayan Bioresource Technology

organism_name: Janthinobacterium lividum


asm_submitter: FDA


asm_submitter: Divison of Bacterial Diseases, Centers for Disease Control

organism_name: Corynebacterium pseudodiphtheriticum


organism_name: Corynebacterium propinquum


asm_submitter: National Center for Biotechnology Information

organism_name: Listeria monocytogenes


asm_submitter: Shandong University

organism_name: Aestuariirhabdus haliotis


asm_submitter: Korea Institute of Geoscience and Mineral Resources

organism_name: Brachybacterium equifaecis


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


asm_submitter: CDC

organism_name: Salmonella enterica


organism_name: Shigella sonnei


asm_submitter: Nanjing Normal University

organism_name: Bacillus subtilis


annotation_name: Annotation submitted by University of Connecticut

annotation_provider: University of Connecticut

asm_submitter: University of Connecticut

organism_name: Spiroplasma attinicola


organism_name: Shigella flexneri


organism_name: Vibrio cholerae


organism_name: Escherichia coli


organism_name: Vibrio parahaemolyticus


asm_submitter: University of Texas at Arlington

infraspecific_name: strain=TXEA

organism_name: Bradyrhizobium japonicum


infraspecific_name: strain=TXVA


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


asm_submitter: University of British Columbia

organism_name: Alicyclobacillus sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Peptococcaceae bacterium


excluded_from_refseq: derived from metagenome

organism_name: Alicyclobacillus mali (ex Roth et al. 2021)


organism_name: Gorillibacterium sp.


organism_name: Pseudacidobacterium ailaaui


organism_name: Caldifarciminota bacterium


organism_name: Rubrobacteraceae bacterium


organism_name: Thermoleophilum sp.


organism_name: Bacillota bacterium


organism_name: Anaerolineae bacterium


organism_name: Armatimonadota bacterium


organism_name: Acetobacteraceae bacterium


organism_name: Terriglobia bacterium


organism_name: Pirellulales bacterium


organism_name: Ignavibacterium sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined


organism_name: Candidatus Pacearchaeota archaeon


organism_name: Bryobacteraceae bacterium


organism_name: Alicyclobacillus sp.


organism_name: Thermoflavifilum sp.


organism_name: Meiothermus ruber


organism_name: Thermaceae bacterium


organism_name: Roseiflexus sp.


organism_name: Burkholderiales bacterium


organism_name: Acidothermus sp.


organism_name: Acidothermus cellulolyticus


organism_name: Bacillota bacterium


organism_name: Bacillus sp. (in: firmicutes)


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Allomeiothermus silvanus


organism_name: Kyrpidia sp.


organism_name: Candidatus Bathyarchaeota archaeon


organism_name: bacterium


organism_name: Paenalicyclobacillus macrosporangiidus


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Anoxybacillus sp.


organism_name: Paenibacillus sp.


organism_name: Geminicoccaceae bacterium


organism_name: Peptococcaceae bacterium


organism_name: Paenalicyclobacillus shizuokensis


organism_name: Syntrophobacterales bacterium


organism_name: Thermomonas hydrothermalis


organism_name: Anoxybacillus ayderensis


organism_name: Paenalicyclobacillus herbarius


organism_name: Armatimonadota bacterium


organism_name: Fimbriimonadales bacterium


organism_name: Bacillota bacterium


organism_name: Alicyclobacillus sp.


organism_name: Candidatus Rokuibacteriota bacterium


organism_name: Candidatus Bipolaricaulota bacterium


excluded_from_refseq: contaminated; derived from metagenome; genus undefined

organism_name: Dehalococcoidia bacterium


asm_submitter: University Duisburg-Essen

organism_name: Flavobacterium micromati


organism_name: Chloroflexota bacterium


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Ralstonia pickettii


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Janthinobacterium lividum


organism_name: Ralstonia sp.


asm_submitter: ISBM

organism_name: Agrobacterium rubi


organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


organism_name: Vibrio cholerae


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Ohio


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Campylobacter upsaliensis


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


asm_submitter: FDA Center for Food Safety and Applied Nutrition

organism_name: Listeria monocytogenes


asm_submitter: Health Protection Agency


asm_submitter: GenomeTrakr Project: Massachusetts Department of Public Health

organism_name: Escherichia coli


organism_name: Shigella sonnei


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Salmonella enterica subsp. enterica serovar Soerenga


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Providencia rettgeri


asm_submitter: FDA


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Oranienburg


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


asm_submitter: The Second Hospital of Tianjin Medical University


asm_submitter: Universita degli Studi della Tuscia

infraspecific_name: strain=NCPPB 3491

organism_name: Pseudomonas avellanae


infraspecific_name: strain=NCPPB 4222


asm_submitter: Nottingham Trent University

infraspecific_name: strain=CCM 8731

organism_name: Staphylococcus edaphicus


asm_submitter: Jiangxi Agricultural University

organism_name: Rummeliibacillus sp. G93


asm_submitter: Henan University of Chinese Medicine

organism_name: Streptomyces sp. RerS4


asm_submitter: University of Agriculture in Krakow

infraspecific_name: strain=N 116

organism_name: Leptospira interrogans


asm_submitter: ULB

isolate: Sulfur Cave


asm_submitter: Shenzhen Center for Disease Control and Prevention

organism_name: Escherichia coli


asm_submitter: Hubei Academy of Agricultural Sciences

organism_name: Bacillus velezensis


asm_submitter: Guizhou University


asm_submitter: Sichuan Normal University


asm_submitter: Joint Institute for Nuclear Research

organism_name: Cytobacillus pseudoceanisediminis


asm_submitter: Hunan Institute of Microbiology

organism_name: Citrobacter sp. XT1-2-2


asm_submitter: USDA-ARS-USMARC

organism_name: Mannheimia haemolytica


infraspecific_name: strain=NCTC 10208


infraspecific_name: strain=NCTC 10636


infraspecific_name: strain=NCTC 9712


asm_submitter: Beijing Normal University

organism_name: Bacillus cereus


asm_submitter: Korean Research Institute of Bioscience and Biotechnology

organism_name: Jatrophihabitans telluris


asm_submitter: Hankyong National University

organism_name: Sphingomonas caseinilytica


asm_submitter: IBCH RAN

organism_name: Acinetobacter baumannii


asm_submitter: University of Tuebingen

organism_name: Paenibacillus amylolyticus


organism_name: Sphingomonas anseongensis


organism_name: Sphingomonas brevis


organism_name: Sphingomonas alba


organism_name: Sphingomonas hankyongi


asm_submitter: Kunming University

infraspecific_name: strain=JCM 4796

organism_name: Streptomyces neyagawaensis


infraspecific_name: strain=NBRC 109811

organism_name: Streptomyces panaciradicis


asm_submitter: Institut hospitalo-universitaire en maladies infectieuses de Marseillee

organism_name: Akkermansia muciniphila


organism_name: Akkermansia massiliensis


asm_submitter: University of Tartu

organism_name: Pseudomonas sp. T1.Ur


excluded_from_refseq: contaminated; unverified source organism; many frameshifted proteins

organism_name: Klebsiella sp. T2.Ur


organism_name: Pseudomonas sp. R3.Fl


organism_name: Pseudomonas sp. R2.Fl


organism_name: Kosakonia sp. R1.Fl


asm_submitter: Yangzhou University

organism_name: Klebsiella quasipneumoniae


asm_submitter: Health Protection Agency

organism_name: Escherichia coli


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Shigella flexneri


asm_submitter: University of Birmingham

organism_name: Acinetobacter baumannii


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Newport


asm_submitter: University Medical Center Hamburg-Eppendorf

organism_name: Mixta hanseatica


asm_submitter: ZHEJIANG UNIVERSITY

organism_name: Pseudomonas fulva


asm_submitter: University of Groningen, University Medical Center Groningen

organism_name: Aggregatibacter actinomycetemcomitans


asm_submitter: SRCAMB

organism_name: Salmonella enterica subsp. enterica serovar Gallinarum


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Hissar


asm_submitter: Institute of Botany, Jiangsu Province and Chinese Academy of Sciences

organism_name: Stenotrophomonas rhizophila


asm_submitter: Zhejiang university of technology

infraspecific_name: strain=GYH

organism_name: Stenotrophomonas maltophilia


asm_submitter: Bangabandhu Sheikh Mujibur Rahman Agricultural University

organism_name: Bacillus subtilis


asm_submitter: Uppsala University

organism_name: Klebsiella pneumoniae U-0608239


asm_submitter: Christian Medical College

organism_name: Klebsiella pneumoniae


annotation_name: Annotation submitted by Instituto Nacional de Tecnologia Agropecuaria

organism_name: Escherichia coli O22:H8


annotation_name: Annotation submitted by Universite de Poitiers ecologie et Biologie des Interactions, UMR CNRS 7267

infraspecific_name: strain=Av

organism_name: Candidatus Hepatincola sp. Av


asm_submitter: Zhongkai University of Agriculture and Engineering

organism_name: Ralstonia pseudosolanacearum


organism_name: Escherichia coli


organism_name: Shigella flexneri


organism_name: Shigella sonnei


asm_submitter: FDA


organism_name: Campylobacter jejuni


asm_submitter: FDA/CFSAN

organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


asm_submitter: CDC

organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Ohio


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Shigella dysenteriae


excluded_from_refseq: contaminated; from large multi-isolate project


asm_submitter: Wenzhou Medical University

organism_name: Providencia stuartii


asm_submitter: Health Protection Agency


asm_submitter: Northwestern University Feinberg School of Medicine

organism_name: Pseudomonas aeruginosa


asm_submitter: INSA Toulouse

organism_name: Eubacterium limosum


asm_submitter: Guangdong Academy of Agricultural Sciencescademy of Agricultural Sciences

organism_name: Actinobacillus pleuropneumoniae


annotation_name: Annotation submitted by Bielefeld University

annotation_provider: Bielefeld University

asm_submitter: Bielefeld University

infraspecific_name: strain=DSM 44278

organism_name: Corynebacterium accolens


asm_submitter: University of Hawaii

organism_name: Clavibacter michiganensis subsp. michiganensis


asm_submitter: King Abdullah University of Science and Technology

organism_name: Bacillus subtilis


organism_name: Paenibacillus sp. PK3_47


excluded_from_refseq: many frameshifted proteins

organism_name: Bacillus halotolerans


asm_submitter: USDA FSIS

organism_name: Campylobacter jejuni


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Adelaide


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Minnesota


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica


organism_name: Bacillus subtilis PY79


organism_name: Niallia circulans


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Litchfield


asm_submitter: National Chung Cheng University

infraspecific_name: strain=TCVGH

organism_name: Prevotella sp. TCVGH


asm_submitter: Mayo Clinic

excluded_from_refseq: derived from single cell

isolate: CCCryo 231-06

organism_name: Nostoc sp. CCCryo 231-06


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Enterococcus faecium


organism_name: Enterococcus faecalis


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


asm_submitter: GenomeTrakr Project: Massachusetts Department of Public Health

organism_name: Escherichia coli


asm_submitter: Centre for Microbiology and Environmental Systems Science

organism_name: Candidatus Rhabdochlamydia oedothoracis


asm_submitter: Sun Yat-sen University

organism_name: Oceanobacillus saliphilus


asm_submitter: Vermont Department of Health Laboratory

organism_name: Listeria monocytogenes


asm_submitter: CDC


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


organism_name: Shigella flexneri


asm_submitter: Nanjing Agriculture university

organism_name: Lactobacillus amylovorus


asm_submitter: Zhejiang Academy of Agricultural Sciences

organism_name: Escherichia fergusonii


asm_submitter: The University of Melbourne

organism_name: Mycoplasmoides gallisepticum


asm_submitter: Robert Koch-Institut

organism_name: Enterococcus casseliflavus


annotation_name: Annotation submitted by Konkuk university

annotation_provider: Konkuk university

asm_submitter: Konkuk university

organism_name: Paenibacillus konkukensis


asm_submitter: Advanced Enzyme Technologies Limited

infraspecific_name: strain=BLXSC

organism_name: Bacillus safensis


asm_submitter: Liverpool School of Tropical Medicine


asm_submitter: FDA


organism_name: Salmonella enterica


asm_submitter: FDA Center for Food Safety and Applied Nutrition


asm_submitter: IRD

organism_name: Thermospira aquatica


asm_submitter: Rouen Normandy University

organism_name: Bacillus altitudinis


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


asm_submitter: Max Planck Institute for Terrestrial Microbiology

organism_name: Acetispira formosa (nom. nud.)


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Litchfield


organism_name: Salmonella enterica subsp. enterica serovar London


organism_name: Salmonella enterica subsp. enterica serovar Berta


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Krefeld


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Listeria monocytogenes


asm_submitter: Centers for Disease Control and Prevention


asm_submitter: CDC

organism_name: Salmonella enterica


asm_submitter: Vermont Department of Health Laboratory


asm_submitter: beijing

organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Salmonella enterica subsp. enterica serovar Give


organism_name: Salmonella enterica subsp. enterica serovar Meleagridis


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


asm_submitter: National Center for Biotechnology Information

organism_name: Klebsiella variicola subsp. variicola


organism_name: Klebsiella pneumoniae subsp. pneumoniae


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Worthington


asm_submitter: Second Military Medical University

infraspecific_name: strain=MCCC 1A08743

organism_name: Vibrio vulnificus


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica


organism_name: Campylobacter jejuni


organism_name: Klebsiella quasipneumoniae subsp. similipneumoniae


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Escherichia coli


organism_name: Klebsiella pneumoniae subsp. pneumoniae


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Listeria monocytogenes


organism_name: Klebsiella variicola subsp. variicola


asm_submitter: Vet-LIRN-CVM-FDA


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Newport


asm_submitter: FDA/CFSAN


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar London


organism_name: Salmonella enterica subsp. enterica serovar Norwich


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Adelaide


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Klebsiella pneumoniae subsp. pneumoniae


organism_name: Salmonella enterica subsp. enterica serovar Worthington


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Alachua


organism_name: Salmonella enterica subsp. enterica serovar Kiambu


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Campylobacter coli


organism_name: Campylobacter upsaliensis


organism_name: Salmonella enterica


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


asm_submitter: Zhejiang Academy of Agricultural Sciences


organism_name: Shigella sonnei


organism_name: Escherichia coli


asm_submitter: Chinese Academy of Tropical Agricultural Sciences

organism_name: Streptomyces sp. 35G-GA-8


organism_name: Streptomyces ardesiacus


asm_submitter: FDA


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Bareilly


asm_submitter: Health Protection Agency

organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Chester


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


organism_name: Shigella flexneri


isolate: blood


isolate: bllod


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica


isolate: cerebrospinal fluid


asm_submitter: Centro Nacional de Biotecnologia-CSIC

organism_name: Klebsiella pneumoniae


asm_submitter: Northwestern University


annotation_name: Annotation submitted by University of Nebraska-Lincoln

annotation_provider: University of Nebraska-Lincoln

asm_submitter: University of Nebraska-Lincoln

organism_name: Clavibacter nebraskensis


asm_submitter: University of Helsinki

organism_name: Flavobacterium sp. B183


asm_submitter: Zhejiang University

organism_name: Enterococcus sp. LX10


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


asm_submitter: Montana State University

organism_name: Candidatus Geocrenenecus arthurdayi


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome


organism_name: Candidatus Wolframiiraptor allenii


asm_submitter: CDC

organism_name: Salmonella enterica


organism_name: Escherichia coli


asm_submitter: Third Institute of Oceanography, Ministry of Natural Resources of PR China

excluded_from_refseq: contaminated; not used as type

organism_name: Marivivens geojensis


infraspecific_name: strain=KCTC 42776

organism_name: Marivivens donghaensis


asm_submitter: Faculty of Agricultural Technology

organism_name: Lactiplantibacillus plantarum


asm_submitter: FDA/CFSAN

organism_name: Listeria monocytogenes


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Brandenburg


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Adelaide


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Campylobacter jejuni


organism_name: Shigella sonnei


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Enterococcus faecalis


organism_name: Salmonella enterica subsp. enterica serovar Derby


asm_submitter: FDA Center for Food Safety and Applied Nutrition


organism_name: Salmonella enterica subsp. enterica serovar Liverpool


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica


organism_name: Salmonella enterica subsp. enterica serovar Alachua


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Shigella boydii


organism_name: Salmonella enterica subsp. enterica serovar Ohio


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Shigella flexneri


asm_submitter: African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University

organism_name: Citrobacter youngae


excluded_from_refseq: annotation fails completeness check

organism_name: Enterobacter hormaechei


organism_name: Salmonella enterica


excluded_from_refseq: fragmented assembly

organism_name: Klebsiella pneumoniae


excluded_from_refseq: contaminated


excluded_from_refseq: contaminated; fragmented assembly


organism_name: Enterobacter cloacae complex sp. OE43NF


organism_name: Klebsiella quasivariicola


asm_submitter: Institute of Tropical Bioscience and Biotechnology

organism_name: Actinoplanes sp. M2I2


organism_name: Paractinoplanes maris


organism_name: Enterobacter kobei


asm_submitter: Research Center of Biotechnology RAS

excluded_from_refseq: derived from metagenome; genus undefined

organism_name: ANME-2 cluster archaeon


organism_name: Anaerolineae bacterium


organism_name: Methanosarcinaceae archaeon


excluded_from_refseq: derived from metagenome

organism_name: Methylobacter sp.


organism_name: Desulfobulbaceae bacterium


asm_submitter: Ondokuz Mayis University

organism_name: Streptomyces sp. YS415


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Halalkalicoccus sp.


organism_name: Streptomyces sp. MCA2


asm_submitter: Shandong University of Technology

organism_name: Pseudomonas eutrophicaquae


organism_name: Micromonospora sp. MSM11


asm_submitter: Faculte de Medecine, Universite Paris-Sud


asm_submitter: University of Florida

organism_name: Staphylococcus aureus


organism_name: Phaeovulum molybdatiresistens


asm_submitter: Prince of Songkla University

organism_name: Klebsiella pneumoniae


asm_submitter: University of Veterinary Sciences

organism_name: Escherichia coli