asm_submitter: Korea University

infraspecific_name: strain=JNU 532

organism_name: Limosilactobacillus fermentum


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: Microbial Institute for Fermentation Industry

assembly_level: Complete Genome

assembly_type: haploid

genome_rep: Full

group: bacteria

organism_name: Lactiplantibacillus plantarum

paired_asm_comp: identical

release_type: Major

version_status: latest


asm_submitter: Henan Normal University

organism_name: Bacillus velezensis


organism_name: Bacillus subtilis


asm_submitter: Pulmuone Institute of Technology

organism_name: Leuconostoc citreum


organism_name: Levilactobacillus brevis


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria innocua


asm_submitter: Health Protection Agency

assembly_level: Contig

excluded_from_refseq: from large multi-isolate project

organism_name: Escherichia coli


organism_name: Shigella sonnei


organism_name: Shigella flexneri


asm_submitter: CDC


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Cerro


asm_submitter: National Center for Biotechnology Information

organism_name: Salmonella enterica subsp. enterica serovar Brandenburg


organism_name: Salmonella enterica subsp. enterica serovar Weltevreden


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Ruiru


organism_name: Salmonella enterica subsp. enterica serovar Bredeney


organism_name: Salmonella enterica subsp. enterica serovar Paratyphi A


organism_name: Salmonella enterica subsp. enterica serovar Diguel


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium var. monophasic 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Virchow


asm_submitter: Xinjiang Medical University

organism_name: Brucella melitensis


organism_name: Salmonella enterica subsp. enterica serovar Chester


asm_submitter: Shandong University Qingdao Campus

assembly_level: Chromosome

excluded_from_refseq: genus undefined

organism_name: SAR92 clade bacterium H455


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Bacillus subtilis


asm_submitter: RDA

excluded_from_refseq: unverified source organism

organism_name: Ralstonia solanacearum


asm_submitter: Chung-Ang university

organism_name: Massilia sp. H6


organism_name: Salmonella enterica subsp. enterica serovar Kiambu


organism_name: Salmonella enterica subsp. enterica serovar Paratyphi B


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Jerusalem


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Muenster


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium var. monophasic 4,[5],12:i:-


organism_name: Klebsiella pneumoniae


organism_name: Salmonella enterica subsp. enterica serovar Typhi


organism_name: Acinetobacter baumannii


isolate: HBG-2 room 1


isolate: HBG-2 room 3

organism_name: Pseudomonas aeruginosa


organism_name: Morganella morganii


organism_name: Citrobacter freundii


isolate: Clostridioides difficile

organism_name: Clostridioides difficile


asm_submitter: Zhongkai University of Agriculture and Engineering

organism_name: Klebsiella variicola


organism_name: Shigella sonnei


asm_submitter: FDA/CFSAN

organism_name: Listeria innocua


organism_name: Salmonella enterica subsp. enterica serovar Anatum


asm_submitter: University of Bern

organism_name: Trueperella pyogenes


asm_submitter: Institute of Marine Research

organism_name: Shewanella baltica


organism_name: Enterococcus faecium


asm_submitter: Nankai University


asm_submitter: UNIVERSITY OF GLASGOW

organism_name: Wolbachia endosymbiont of Aedes albopictus

refseq_category: reference genome


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Listeria monocytogenes


organism_name: Shigella flexneri


organism_name: Cronobacter sakazakii


asm_submitter: Tyumen State University

organism_name: Staphylococcus aureus


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica


asm_submitter: Health Protection Agency


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


asm_submitter: CDC


annotation_name: Annotation submitted by DOE Joint Genome Institute

annotation_provider: DOE Joint Genome Institute

asm_submitter: DOE Joint Genome Institute

assembly_level: Scaffold

organism_name: Xanthomonas sp. 4461


organism_name: Chryseobacterium sp. JUb7


organism_name: Salinibacter ruber


organism_name: Sphingobacterium sp. JUb21


infraspecific_name: strain=USDA 90

organism_name: Bradyrhizobium elkanii


organism_name: Xanthomonas sp. 3793


infraspecific_name: strain=CECT 5829

organism_name: Bradyrhizobium betae

relation_to_type_material: assembly from type material


organism_name: Leucobacter aridicollis


organism_name: Achromobacter sp. JUb104


group: archaea

infraspecific_name: strain=PS

organism_name: Methanococcus voltae PS


infraspecific_name: strain=USDA 37

organism_name: Bradyrhizobium japonicum


organism_name: Caldanaerobacter subterraneus subsp. tengcongensis MB4


organism_name: Microbacterium sp. AK031


organism_name: Fervidibacter sacchari


organism_name: Chromobacterium alkanivorans


infraspecific_name: strain=THG 15

organism_name: Chryseobacterium ginsenosidimutans


infraspecific_name: strain=USDA 45


organism_name: Aeromonas sp. BIGb0405


organism_name: Acinetobacter johnsonii


organism_name: Pseudomonas sp. BIGb0558


organism_name: Salinibacter ruber


organism_name: Aeromonas hydrophila


organism_name: Tsukamurella ocularis


infraspecific_name: strain=USDA 40

organism_name: Bradyrhizobium elkanii


organism_name: Pseudomonas sp. BIGb0450


organism_name: Methanococcus voltae


organism_name: Pseudomonas putida


organism_name: Buttiauxella sp. BIGb0471


infraspecific_name: strain=USDA 73

organism_name: Bradyrhizobium japonicum


infraspecific_name: strain=USDA 78


infraspecific_name: strain=USDA 71a


infraspecific_name: strain=USDA 72


infraspecific_name: strain=USDA 66


organism_name: Erwinia rhapontici


organism_name: Klebsiella sp. BIGb0407


organism_name: Pseudomonas grimontii


infraspecific_name: strain=USDA 70


organism_name: Enterobacter sp. SLBN-59


organism_name: Bacillus sp. JUb11


organism_name: Pseudomonas sp. JUb42


infraspecific_name: strain=USDA 84


organism_name: Arthrobacter sp. JUb119


organism_name: Sphingobacterium sp. BIGb0116


organism_name: Rhizobium sp. BK176


organism_name: Salinibacter ruber


infraspecific_name: strain=CECT 7660

organism_name: Mucilaginibacter dorajii


infraspecific_name: strain=USDA 74

organism_name: Bradyrhizobium elkanii


infraspecific_name: strain=USDA 39


infraspecific_name: strain=USDA 38

organism_name: Bradyrhizobium japonicum USDA 38


infraspecific_name: strain=USDA 35


infraspecific_name: strain=USDA 58


infraspecific_name: strain=USDA 63


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Aeromonas veronii


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Shigella flexneri


infraspecific_name: strain=CFBP 7915

organism_name: Xanthomonas campestris


organism_name: Mucilaginibacter empetricola


infraspecific_name: strain=USDA 43

organism_name: Bradyrhizobium japonicum


infraspecific_name: strain=USDA 50


organism_name: Rahnella sp. BIGb0603


infraspecific_name: strain=USDA 71


organism_name: Methanosalsum natronophilum


organism_name: Rhizobium sp. BK661


infraspecific_name: strain=HMT 1

organism_name: Methylohalomonas lacus


infraspecific_name: strain=USDA 77


infraspecific_name: strain=USDA 99


infraspecific_name: strain=USDA 98


organism_name: Tsukamurella ocularis


organism_name: Salinibacter ruber


organism_name: Citrobacter sp. JUb117


organism_name: Aeromonas sp. BIGb0445


organism_name: Microbacterium phyllosphaerae


organism_name: Bacillus sp. JUb91


organism_name: Niastella sp. OAS944


organism_name: Aeromonas hydrophila


infraspecific_name: strain=USDA 61

organism_name: Bradyrhizobium elkanii USDA 61


infraspecific_name: strain=USDA 59


infraspecific_name: strain=USDA 57


infraspecific_name: strain=USDA 41


infraspecific_name: strain=USDA 46

organism_name: Bradyrhizobium elkanii


infraspecific_name: strain=SEMIA 424

organism_name: Bradyrhizobium centrosematis


organism_name: Pseudomonas sp. JAI111


infraspecific_name: strain=USDA 48

organism_name: Bradyrhizobium japonicum


infraspecific_name: strain=SEMIA 431


organism_name: Gordonia amarae


infraspecific_name: strain=USDA 83


organism_name: Acinetobacter guillouiae


organism_name: Myroides odoratus


organism_name: Stenotrophomonas rhizophila


organism_name: Rhodococcus erythropolis


organism_name: Pseudomonas sp. BIGb0381


organism_name: Stenotrophomonas chelatiphaga


organism_name: Rheinheimera pacifica


infraspecific_name: strain=USDA 66a


organism_name: Pseudomonas sp. BIGb0278


organism_name: Serratia sp. BIGb0234


organism_name: Serratia sp. BIGb0163


organism_name: Klebsiella terrigena


organism_name: Comamonas sp. BIGb0152


organism_name: Salinibacter ruber


organism_name: Rhizobium sp. BIGb0125


organism_name: Klebsiella sp. BIGb0132


organism_name: Sphingobacterium sp. BIGb0165


organism_name: Stenotrophomonas sp. BIGb0135


organism_name: Pseudomonas sp. BIGb0164


organism_name: Mycetocola sp. BIGb0189


organism_name: Pseudomonas sp. BIGb0176


organism_name: Chryseobacterium sp. BIGb0232


infraspecific_name: strain=USDA 67

organism_name: Bradyrhizobium elkanii


organism_name: Shigella flexneri


organism_name: Escherichia coli


organism_name: Salmonella enterica


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Putten


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Shigella sonnei


asm_submitter: National Center for Biotechnology Information

organism_name: Enterococcus faecium


organism_name: Campylobacter jejuni


organism_name: Pseudomonas aeruginosa


isolate: Typhimurium

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


isolate: monofasisk


asm_submitter: nstitute of Microbiology, Chinese Academy of Sciences

organism_name: Aquiflexum gelatinilyticum


asm_submitter: Oswaldo Cruz Institute

organism_name: Klebsiella pneumoniae


excluded_from_refseq: many frameshifted proteins

organism_name: Clostridium botulinum


organism_name: Klebsiella variicola subsp. variicola


organism_name: Klebsiella quasipneumoniae subsp. similipneumoniae


asm_submitter: National Research Council

excluded_from_refseq: annotation fails completeness check

organism_name: Salmonella enterica


excluded_from_refseq: annotation fails completeness check; many frameshifted proteins


organism_name: Shigella boydii


asm_submitter: Center for Food Safety and Applied Nutrition


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


asm_submitter: USDA FSIS


asm_submitter: US FDA

organism_name: Gleimia sp. 6138-11-ORH1


organism_name: Corynebacterium sp. ES2715-CONJ3


organism_name: Streptococcus sciuri


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Staphylococcus americanisciuri


organism_name: Salmonella enterica subsp. enterica serovar Eko


asm_submitter: TEXAS A&M UNIVERSITY

organism_name: Pantoea sp. B623


organism_name: Corynebacterium sp. ES2775-CONJ


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium var. monophasic 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Clostridium botulinum


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: The National Research Center for the Working Environment

organism_name: Staphylococcus aureus


asm_submitter: Universidad Nacional de San Antonio Abad

organism_name: Arhodomonas aquaeolei


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


asm_submitter: FDA/CFSAN

organism_name: Cronobacter sakazakii


organism_name: Listeria monocytogenes


organism_name: Shigella flexneri


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


asm_submitter: FDA Center for Food Safety and Applied Nutrition


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Give


organism_name: Salmonella enterica subsp. enterica serovar Reading


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium var. monophasic 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Kimuenza


organism_name: Salmonella enterica subsp. enterica serovar Emek


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


asm_submitter: CDC

organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Campylobacter coli


organism_name: Shigella sonnei


organism_name: Listeria monocytogenes


asm_submitter: University of California Merced

infraspecific_name: strain=WOBR

organism_name: Candidatus Karelsulcia muelleri


infraspecific_name: strain=OIPI


infraspecific_name: strain=OIMY


infraspecific_name: strain=OIDO


infraspecific_name: strain=NHBR


infraspecific_name: strain=MIPS


infraspecific_name: strain=MIPI


infraspecific_name: strain=MIMY


infraspecific_name: strain=MICO


infraspecific_name: strain=KISC


infraspecific_name: strain=KIPI


infraspecific_name: strain=KIMY


infraspecific_name: strain=KIDO


organism_name: Vibrio parahaemolyticus


infraspecific_name: strain=KICL


organism_name: Shigella flexneri


infraspecific_name: strain=HMCO


organism_name: Campylobacter jejuni


infraspecific_name: strain=HIPI


infraspecific_name: strain=HIMY


infraspecific_name: strain=HICO


infraspecific_name: strain=EMBR


infraspecific_name: strain=EHBR


excluded_from_refseq: missing rRNA genes; missing tRNA genes

infraspecific_name: strain=WOBR

organism_name: Candidatus Nasuia deltocephalincola


infraspecific_name: strain=OIPI


infraspecific_name: strain=OIMY


infraspecific_name: strain=NHBR


infraspecific_name: strain=MIPS


infraspecific_name: strain=MIPI


infraspecific_name: strain=MIMY


infraspecific_name: strain=MICO


infraspecific_name: strain=KISC


infraspecific_name: strain=KIPI


organism_name: Cronobacter sakazakii


infraspecific_name: strain=KIMY


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Vibrio cholerae


asm_submitter: Health Protection Agency


asm_submitter: FDA


asm_submitter: Centers for Disease Control and Prevention


infraspecific_name: strain=KIDO


infraspecific_name: strain=KICL


excluded_from_refseq: missing rRNA genes

infraspecific_name: strain=HMCO


infraspecific_name: strain=HIMY


infraspecific_name: strain=HICO


infraspecific_name: strain=EMBR


infraspecific_name: strain=EHBR


organism_name: Salmonella enterica subsp. enterica serovar London


asm_submitter: National Center for Biotechnology Information

organism_name: Clostridioides difficile


organism_name: Shigella dysenteriae


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica


organism_name: Escherichia coli


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Listeria monocytogenes


organism_name: Shigella flexneri


organism_name: Campylobacter jejuni


organism_name: Enterococcus faecium


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Cronobacter sakazakii


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


organism_name: Campylobacter coli


organism_name: Shigella sonnei


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Klebsiella pneumoniae


organism_name: Pseudomonas aeruginosa


isolate: clinical isolate F2137


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Ouakam


organism_name: Escherichia coli


organism_name: Listeria monocytogenes


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Campylobacter jejuni


organism_name: Providencia rettgeri


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Cerro