organism_name: Parabacteroides distasonis


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: Yonsei University

assembly_level: Complete Genome

assembly_type: haploid

excluded_from_refseq: derived from metagenome; genus undefined

genome_rep: Full

group: bacteria

organism_name: Coriobacteriaceae bacterium

release_type: Major

version_status: latest


excluded_from_refseq: derived from metagenome

organism_name: Faecalibacterium prausnitzii


organism_name: Coprobacillaceae bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Bifidobacteriaceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Veillonellaceae bacterium


organism_name: Bacteroides ovatus


organism_name: Bacteroides thetaiotaomicron


excluded_from_refseq: unverified source organism; derived from metagenome; genus undefined

organism_name: Clostridiaceae bacterium


organism_name: Flavonifractor plautii


asm_submitter: Changshu Institute of Technology

organism_name: Bacillus velezensis

paired_asm_comp: identical


organism_name: Kosakonia cowanii

refseq_category: reference genome


asm_submitter: University of Chicago

organism_name: Clostridioides difficile


asm_submitter: University of Pretoria

assembly_level: Chromosome

organism_name: Yersinia enterocolitica


asm_submitter: The First Affiliated Hospital of Zhejiang University

excluded_from_refseq: unverified source organism

organism_name: Klebsiella pneumoniae


asm_submitter: Chinese Academy of Forestry

infraspecific_name: strain=JCM 14903

organism_name: Microbacterium terricola

relation_to_type_material: assembly from type material


asm_submitter: Orebro University Hospital

organism_name: Neisseria gonorrhoeae


asm_submitter: UR oenologie

assembly_level: Contig

organism_name: Oenococcus kitaharae


asm_submitter: CDC

excluded_from_refseq: from large multi-isolate project

organism_name: Escherichia coli


organism_name: Salmonella enterica


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: FDA


asm_submitter: USDA FSIS

organism_name: Campylobacter jejuni


asm_submitter: National Center for Biotechnology Information

organism_name: Legionella pneumophila


asm_submitter: FDA/CFSAN


asm_submitter: FDA Center for Food Safety and Applied Nutrition


asm_submitter: Center for Food Safety and Applied Nutrition


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Shigella flexneri


organism_name: Shigella sonnei


asm_submitter: Centers for Disease Control and Prevention


asm_submitter: wenzhou medical university


asm_submitter: Health Protection Agency


organism_name: Cronobacter sakazakii


organism_name: Salmonella enterica subsp. enterica serovar Thompson


organism_name: Salmonella enterica subsp. enterica serovar Chailey


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar London


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Vibrio vulnificus


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Pseudomonas aeruginosa


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Muenster


organism_name: Salmonella enterica subsp. enterica serovar Meleagridis


organism_name: Salmonella enterica subsp. enterica serovar Oranienburg


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


asm_submitter: KDCA

organism_name: Coxiella burnetii


asm_submitter: Chinese Academy of Agricultural Sciences

organism_name: Xanthomonas sacchari


organism_name: Pantoea ananatis


organism_name: Pantoea stewartii


excluded_from_refseq: unverified source organism; many frameshifted proteins


asm_submitter: Advanced Enzyme Technologies Limited

infraspecific_name: strain=PLSSC

organism_name: Bacillus subtilis


asm_submitter: USDA-ARS


organism_name: Leclercia adecarboxylata


organism_name: Escherichia coli


organism_name: Klebsiella oxytoca


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Klebsiella pneumoniae


asm_submitter: University of Pretoria

assembly_level: Scaffold

organism_name: Yersinia enterocolitica


asm_submitter: USDA Agricultural Research Service

organism_name: Pediococcus ethanolidurans


asm_submitter: University of Sydney

organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Weissella cibaria


organism_name: Pediococcus pentosaceus


organism_name: Staphylococcus aureus


asm_submitter: Fujian Agriculture and Forestry University

organism_name: Sulfurospirillum oryzae


organism_name: Shouchella tritolerans


organism_name: Propionivibrio soli


organism_name: Cellulomonas sp. SG140


asm_submitter: IFREMER

organism_name: Campylobacter lari


organism_name: Campylobacter sp. RKI_CA19_01128


organism_name: Campylobacter sp. RKI_CA19_01127


organism_name: Campylobacter sp. RKI_CA19_01121


organism_name: Campylobacter sp. RKI_CA19_01122


organism_name: Campylobacter sp. RKI_CA19_01116


organism_name: Campylobacter sp. IFREMER_LSEM_CL908


excluded_from_refseq: from large multi-isolate project; genome length too small


organism_name: Campylobacter sp. IFREMER_LSEM_CL292


organism_name: Campylobacter sp. IFREMER_LSEM_CL2256


organism_name: Campylobacter sp. IFREMER_LSEM_CL2194


organism_name: Campylobacter sp. IFREMER_LSEM_CL2151


organism_name: Campylobacter sp. IFREMER_LSEM_CL2127


organism_name: Campylobacter sp. IFREMER_LSEM_CL2101


organism_name: Campylobacter sp. IFREMER_LSEM_CL2090


organism_name: Campylobacter sp. IFREMER_LSEM_CL1904


organism_name: Campylobacter sp. IFREMER_LSEM_CL1890


organism_name: Campylobacter sp. IFREMER_LSEM_CL1846


organism_name: Campylobacter lari


organism_name: Campylobacter sp. IFREMER_LSEM_CL1097


organism_name: Campylobacter sp. IFREMER_LSEM_CL1085


asm_submitter: Postgraduate Institute of Medical Education and Research (PGIMER), Chandigarh

organism_name: Bacteroides nordii


organism_name: Campylobacter sp. FU_520


organism_name: Campylobacter sp. FU_497


organism_name: Campylobacter sp. CNRCH_2016_3089


organism_name: Campylobacter sp. CNRCH_2016_0050h


organism_name: Campylobacter sp. CNRCH_2015_1657


organism_name: Campylobacter sp. CNRCH_2015_0814


organism_name: Campylobacter sp. CNRCH_2015_0338h


organism_name: Campylobacter sp. CNRCH_2014_2849


organism_name: Campylobacter sp. CNRCH_2014_2452


organism_name: Campylobacter sp. CNRCH_2013_0898h


organism_name: Campylobacter sp. CNRCH_2014_0184h


organism_name: Campylobacter sp. CNRCH_2013_0855


organism_name: Campylobacter sp. CNRCH_2013_0671h


organism_name: Campylobacter lari


organism_name: Campylobacter sp. CNRCH_2007_0968H


organism_name: Pediococcus ethanolidurans


asm_submitter: CDPHE SARS-CoV-2 submissions

organism_name: Salmonella enterica


organism_name: Campylobacter jejuni


asm_submitter: University of Texas at Austin

excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: bacterium


organism_name: candidate division LCP-89 bacterium


asm_submitter: Shandong University


asm_submitter: The University of Texas at Austin


organism_name: Acinetobacter baumannii


organism_name: Escherichia coli


asm_submitter: CDC

organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Klebsiella pneumoniae


organism_name: Klebsiella oxytoca


organism_name: Vibrio parahaemolyticus


organism_name: Pseudomonas aeruginosa


organism_name: Klebsiella ornithinolytica


asm_submitter: FDA

organism_name: Enterococcus faecalis


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Enterobacter hormaechei


isolate: whole organism


organism_name: Klebsiella aerogenes


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: US FDA

organism_name: Mycoplasma enhydrae


asm_submitter: College of Life Science and Technology

organism_name: Rhizobium sp. TRM96650


organism_name: Rhizobium sp. TRM95796


organism_name: Ureaplasma miroungigenitalium


organism_name: Ureaplasma zalophigenitalium


organism_name: Ureaplasma sp. ES3154-GEN


organism_name: Rhizobium sp. TRM96647


asm_submitter: Chinese Acad Sci, Inst Microbiol

organism_name: Lentilactobacillus hilgardii


excluded_from_refseq: contaminated; unverified source organism

organism_name: Companilactobacillus farciminis


asm_submitter: Silpakorn University

organism_name: Enterobacter sp. RD4-1-1


organism_name: Limosilactobacillus fermentum


asm_submitter: The First Affiliated Hospital, School of Medicine, Zhejiang University

organism_name: Pseudomonas aeruginosa


asm_submitter: Heidelberg University Hospital

organism_name: Enterobacter hormaechei


asm_submitter: Fiocruz - Instituto Leonidas e Maria Deane

excluded_from_refseq: derived from metagenome; fragmented assembly

isolate: wDgra

organism_name: Wolbachia pipientis


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: bacterium


asm_submitter: University of Regina

excluded_from_refseq: annotation fails completeness check

organism_name: Klebsiella pneumoniae


asm_submitter: Walter Reed Army Institute of Research


asm_submitter: University of Chinese Academy of Sciences

organism_name: Saxibacter everestensis


asm_submitter: University of Chemistry and Technology

organism_name: Solicola gregarius


asm_submitter: Engelhardt Institute of Molecular Biology, Russian Academy of Sciences,

organism_name: Neisseria gonorrhoeae


organism_name: Acinetobacter baumannii


asm_submitter: KDCA

organism_name: Coxiella burnetii


asm_submitter: Utah Public Health Laboratory Infectious Disease submission group

organism_name: Leclercia adecarboxylata


asm_submitter: ATCC


asm_submitter: LABEO


excluded_from_refseq: contaminated


asm_submitter: North West University

organism_name: Pseudomonas cichorii


asm_submitter: Universiti Sultan Zainal Abidin


asm_submitter: Shanxi Eye Hospital

organism_name: Roseomonas xinghualingensis


asm_submitter: University of Georgia

organism_name: Pseudomonas capsici


asm_submitter: Kamdhenu University


asm_submitter: University of Calcutta

organism_name: Bacillus velezensis


asm_submitter: Guangxi University of Science and Technology

organism_name: Virgibacillus sp. LDC1


asm_submitter: Bharat Bio

organism_name: Heyndrickxia coagulans


asm_submitter: University of Agriculture in Krakow

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

infraspecific_name: strain=Vache K3

organism_name: Leptospira borgpetersenii


asm_submitter: Huzhou CDC

organism_name: Vibrio parahaemolyticus


asm_submitter: Makerere University

organism_name: Pseudomonas aeruginosa


asm_submitter: City university of Hong Kong

organism_name: Escherichia coli


excluded_from_refseq: fragmented assembly; from large multi-isolate project


excluded_from_refseq: contaminated; fragmented assembly; from large multi-isolate project


excluded_from_refseq: contaminated; from large multi-isolate project


asm_submitter: Hellenic Agricultural Organization Demeter

organism_name: Lactococcus petauri


asm_submitter: Teaching hospital of Caen Normandy


asm_submitter: NOAA/UM

excluded_from_refseq: contaminated; derived from metagenome

organism_name: Cohaesibacter sp.


organism_name: Marinobacterium sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome


excluded_from_refseq: derived from metagenome


organism_name: Silicimonas sp.


organism_name: Marinibacterium sp.


organism_name: Amphritea sp.


organism_name: Cellvibrionaceae bacterium


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Alphaproteobacteria bacterium


organism_name: Campylobacterales bacterium


organism_name: Porticoccaceae bacterium


organism_name: Mangrovicoccus sp.


organism_name: Candidatus Albibeggiatoa sp. nov. NOAA


organism_name: Flavobacteriaceae bacterium


asm_submitter: Faculty of Public Health

organism_name: Streptococcus suis


asm_submitter: Cross-sectoral framework for quality Assurance Resources for countries in the European Union – CARE - National Veterinary Research Institute (PIWET)

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


asm_submitter: Yangzhou University

organism_name: Enterococcus faecium


asm_submitter: Public Health Agency of Canada

organism_name: Neisseria meningitidis


asm_submitter: Universidad de Buenos Aires

infraspecific_name: strain=CCl 160

organism_name: Achromobacter ruhlandii


infraspecific_name: strain=CCL 138 R


infraspecific_name: strain=CCL 134


infraspecific_name: strain=CCL 138


asm_submitter: Bangladesh Agricultural University

organism_name: Streptococcus agalactiae


organism_name: Streptococcus uberis


asm_submitter: Shan Dong University

organism_name: Halocynthiibacter halioticoli


asm_submitter: Health Protection Agency

organism_name: Shigella sonnei


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Enterobacter hormaechei


organism_name: Escherichia coli


organism_name: Klebsiella pneumoniae


organism_name: Shigella flexneri


organism_name: Shigella boydii


organism_name: Escherichia albertii


asm_submitter: CDC

organism_name: Salmonella enterica


asm_submitter: National Center for Biotechnology Information

organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica


organism_name: Salmonella enterica subsp. enterica serovar Orion


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Oranienburg


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Idikan


organism_name: Salmonella enterica subsp. enterica serovar Litchfield


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Salmonella enterica subsp. enterica serovar Derby


asm_submitter: USDA FSIS

organism_name: Campylobacter jejuni


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Escherichia coli


organism_name: Campylobacter coli


asm_submitter: Centers for Disease Control and Prevention


organism_name: Shigella sonnei


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Acinetobacter baumannii


organism_name: Klebsiella pneumoniae


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Berta


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Chailey


organism_name: Campylobacter lari


organism_name: Salmonella enterica subsp. enterica serovar Bredeney


organism_name: Enterococcus faecalis


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Give


asm_submitter: Kunming University of Science and Technology

infraspecific_name: strain=AACE 3

organism_name: Lacticaseibacillus chiayiensis


asm_submitter: Jinan University

organism_name: Streptococcus agalactiae


asm_submitter: University of California, Irvine


asm_submitter: Konkuk university


asm_submitter: Shanghai Jiao Tong University

excluded_from_refseq: genus undefined

organism_name: Muribaculaceae bacterium MF13079


asm_submitter: The University of Hong Kong

organism_name: Microcella sp.


organism_name: Cyclobacteriaceae bacterium


excluded_from_refseq: from large multi-isolate project

organism_name: Salmonella enterica subsp. enterica serovar Kentucky


asm_submitter: Michigan Department of Health and Human Services


organism_name: Salmonella enterica


organism_name: Anaerolineales bacterium


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Campylobacter jejuni


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Shigella flexneri


organism_name: Enhydrobacter sp.


organism_name: Devosia sp.


organism_name: Shigella sonnei


organism_name: Campylobacter coli


asm_submitter: Universiti Malaysia Sabah

organism_name: Paenibacillus sp. PSB04


asm_submitter: ProxEnRem Inc.

organism_name: Bacillus subtilis subsp. subtilis


asm_submitter: Hoonygen

organism_name: Escherichia coli


asm_submitter: Handong Global University

organism_name: Limosilactobacillus fermentum


organism_name: Bacillus sp. 41-22


asm_submitter: Heilongjiang University

excluded_from_refseq: unverified source organism

organism_name: Bacillus sp. T_4


asm_submitter: University of Tuebingen

organism_name: Staphylococcus epidermidis


asm_submitter: Third Institute of Oceanography, Ministry of Natural Resources

organism_name: Bacillus halotolerans


organism_name: Bacillus zhangzhouensis


asm_submitter: Huazhong University of Science and Technology

organism_name: Pectobacterium carotovorum


asm_submitter: Health Protection Agency


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Berta


asm_submitter: CDC

organism_name: Salmonella enterica


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


asm_submitter: FDA/CFSAN

organism_name: Cronobacter sakazakii


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Soerenga


organism_name: Listeria monocytogenes


organism_name: Shigella dysenteriae


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


asm_submitter: Faculty of Science, Prince of Songkla University

organism_name: Rhodopseudomonas palustris


organism_name: Salmonella enterica subsp. enterica serovar Give


excluded_from_refseq: unverified source organism; many frameshifted proteins


asm_submitter: Centers for Disease Control and Prevention


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


asm_submitter: Zhengzhou University

organism_name: Klebsiella sp. KP20-425-1


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


asm_submitter: Zhejiang University

organism_name: Staphylococcus aureus


asm_submitter: Anhui Academy of Agricultural Sciences

organism_name: Methylobacterium flocculans


asm_submitter: Institute of Applied Ecology (CAS)

infraspecific_name: strain=Y

organism_name: Acetobacterium wieringae


organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


organism_name: Salmonella enterica


organism_name: Escherichia coli


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


organism_name: Klebsiella oxytoca


organism_name: Enterobacter hormaechei


organism_name: Klebsiella pneumoniae


asm_submitter: FDA Center for Food Safety and Applied Nutrition

organism_name: Listeria monocytogenes


organism_name: Citrobacter freundii


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: Russian Research Anti-Plague Institute "Microbe"

organism_name: Yersinia pestis subsp. pestis


excluded_from_refseq: many frameshifted proteins


organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Shigella flexneri


organism_name: Shigella sonnei


asm_submitter: Kuban State Agrarian University


asm_submitter: Health Protection Agency


organism_name: Campylobacter jejuni


organism_name: Campylobacter upsaliensis


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Campylobacter coli


asm_submitter: The 6th Affiliated Hospital of Shenzhen University Health Center

organism_name: Acinetobacter baumannii


asm_submitter: University of Jos

organism_name: Achromobacter xylosoxidans


asm_submitter: National Center for Biotechnology Information

infraspecific_name: strain=microbial


asm_submitter: Korea Disease Control and Prevention Agency

organism_name: Mycobacterium tuberculosis


asm_submitter: Institute of Plant Protection, Chinese Academy of Agriclutural sciences

organism_name: Erwinia amylovora


asm_submitter: Lanzhou University

organism_name: Cellulosimicrobium sp. SH8


asm_submitter: University of the West Indies

organism_name: Klebsiella pneumoniae


infraspecific_name: strain=ST212 O18:H49


infraspecific_name: strain=ST50 O150:H28


infraspecific_name: strain=ST7627 O8:H10


infraspecific_name: strain=ST135 ONT:H1


infraspecific_name: strain=ST127 O75:H31


organism_name: Klebsiella quasipneumoniae


infraspecific_name: strain=ST362 O7:H6


infraspecific_name: strain=ST349 O166:H15


infraspecific_name: strain=ST3594 O8:H7


infraspecific_name: strain=ST162 O8:H28


infraspecific_name: strain=ST1857 O107:H5


infraspecific_name: strain=ST127 O6:H31


infraspecific_name: strain=ST6946 O22:H14


infraspecific_name: strain=ST8439 ONT:H1


infraspecific_name: strain=ST1300 ONT:HNT


infraspecific_name: strain=ST8440 ONT:H31


infraspecific_name: strain=ST6579 ONT:H4


infraspecific_name: strain=ST1308 O8:H7


infraspecific_name: strain=ST1868 ONT:H45


infraspecific_name: strain=ST7800 O8:H5


infraspecific_name: strain=microbial


infraspecific_name: strain=ST7627 O8:H10


infraspecific_name: strain=ST424 ONT:H19


infraspecific_name: strain=Escherichia coli O25b:H4-ST131


asm_submitter: College of Life Sciences and Technology, Wuhan Polytechnic University

organism_name: Halomonas qinghailakensis


asm_submitter: Uppsala University

infraspecific_name: strain=DSM 43292

organism_name: Mycolicibacterium vaccae


infraspecific_name: strain=DSM 45132

organism_name: Mycolicibacterium insubricum


infraspecific_name: strain=DSM 43637

organism_name: Mycobacterium farcinogenes


infraspecific_name: strain=DSM 45406

organism_name: Mycolicibacterium rufum


excluded_from_refseq: fragmented assembly; not used as type

infraspecific_name: strain=DSM 44164

organism_name: Mycolicibacter nonchromogenicus


infraspecific_name: strain=DSM 45145

organism_name: Mycobacterium noviomagense


infraspecific_name: strain=DSM 43992

organism_name: Mycobacterium scrofulaceum


infraspecific_name: strain=DSM 43999

organism_name: Mycolicibacterium aurum


infraspecific_name: strain=DSM 44077

organism_name: Mycolicibacterium gadium


infraspecific_name: strain=DSM 44166

organism_name: Mycobacterium szulgai


excluded_from_refseq: contaminated; not used as type

infraspecific_name: strain=DSM 44616

organism_name: Mycobacterium saskatchewanense


infraspecific_name: strain=DSM 44064

organism_name: Mycobacterium interjectum


infraspecific_name: strain=DSM 45633

organism_name: Mycolicibacter minnesotensis


infraspecific_name: strain=DSM 44179

organism_name: Mycolicibacterium fallax


infraspecific_name: strain=DSM 44572

organism_name: Mycobacterium palustre


infraspecific_name: strain=DSM 45108

organism_name: Mycobacterium pseudoshottsii


infraspecific_name: strain=DSM 44076

organism_name: Mycolicibacterium sphagni


infraspecific_name: strain=DSM 45070

organism_name: Mycolicibacterium setense


infraspecific_name: strain=DSM 7251

organism_name: Mycolicibacterium vanbaalenii PYR-1

relation_to_type_material: assembly from heterotypic synonym type material


infraspecific_name: strain=DSM 45391

organism_name: Mycolicibacterium hippocampi


infraspecific_name: strain=DSM 44241

organism_name: Mycolicibacter hiberniae


infraspecific_name: strain=DSM 44605

organism_name: Mycolicibacterium pyrenivorans


infraspecific_name: strain=DSM 44577

organism_name: Mycobacterium lacus


infraspecific_name: strain=DSM 44615

organism_name: [Mycobacterium] manitobense


infraspecific_name: strain=DSM 45454

organism_name: Mycolicibacter algericus DSM 45454


infraspecific_name: strain=DSM 44635

organism_name: Mycolicibacterium tokaiense


infraspecific_name: strain=DSM 44633

organism_name: Mycolicibacterium chitae


infraspecific_name: strain=DSM 45176

organism_name: Mycobacterium riyadhense


infraspecific_name: strain=DSM 44136

organism_name: Mycobacterium conspicuum


infraspecific_name: strain=DSM 45059

organism_name: Mycobacterium stomatepiae


infraspecific_name: strain=DSM 44697

organism_name: Mycolicibacterium psychrotolerans


infraspecific_name: strain=DSM 44627

organism_name: Mycobacterium kubicae


infraspecific_name: strain=DSM 44803

organism_name: Mycobacterium nebraskense


infraspecific_name: strain=DSM 44153

organism_name: Mycolicibacillus trivialis


infraspecific_name: strain=DSM 45363

organism_name: Mycolicibacterium gilvum


infraspecific_name: strain=DSM 44160

organism_name: Mycobacterium gordonae


infraspecific_name: strain=DSM 44277

organism_name: Mycobacterium bohemicum


infraspecific_name: strain=DSM 44471

organism_name: Mycobacterium heidelbergense


infraspecific_name: strain=DSM 45746

organism_name: Mycobacterium bourgelatii


infraspecific_name: strain=CCUG 56329

organism_name: Mycobacterium timonense


infraspecific_name: strain=DSM 43227

organism_name: Mycolicibacter terrae


infraspecific_name: strain=DSM 44428

organism_name: Mycobacterium heckeshornense


infraspecific_name: strain=DSM 45441

organism_name: Mycobacterium sherrisii


infraspecific_name: strain=DSM 44049

organism_name: Mycobacterium intermedium


infraspecific_name: strain=DSM 45167

organism_name: Mycolicibacterium madagascariense


infraspecific_name: strain=DSM 44222

organism_name: Mycolicibacterium pulveris


infraspecific_name: strain=DSM 45439

organism_name: Mycobacterium bouchedurhonense


infraspecific_name: strain=DSM 45364

organism_name: Mycolicibacterium frederiksbergense


infraspecific_name: strain=DSM 44203

organism_name: Mycolicibacterium novocastrense


infraspecific_name: strain=DSM 44221

organism_name: Mycolicibacterium moriokaense


infraspecific_name: strain=DSM 44220

organism_name: Mycolicibacterium fortuitum


infraspecific_name: strain=DSM 44147

organism_name: Mycolicibacterium aichiense


infraspecific_name: strain=DSM 44183

organism_name: Mycolicibacterium hodleri


infraspecific_name: strain=DSM 44680

organism_name: Mycolicibacterium brisbanense


infraspecific_name: strain=DSM 45663

organism_name: Mycobacterium shinjukuense


infraspecific_name: strain=DSM 44340

organism_name: Mycolicibacterium tokaiense


infraspecific_name: strain=DSM 44167

organism_name: Mycolicibacterium thermoresistibile


infraspecific_name: strain=DSM 44828

organism_name: Mycolicibacterium canariasense


infraspecific_name: strain=CCUG 37585

organism_name: Mycolicibacterium alvei


infraspecific_name: strain=DSM 43524

organism_name: Mycolicibacterium diernhoferi


infraspecific_name: strain=DSM 45057

organism_name: Mycobacterium angelicum


infraspecific_name: strain=DSM 43271

organism_name: Mycolicibacterium peregrinum


infraspecific_name: strain=DSM 45433

organism_name: Mycolicibacterium crocinum


infraspecific_name: strain=DSM 44624

organism_name: Mycobacterium branderi


infraspecific_name: strain=CCUG 47168

organism_name: Mycolicibacterium wolinskyi


infraspecific_name: strain=DSM 44368

organism_name: Mycolicibacterium elephantis


infraspecific_name: strain=DSM 44177

organism_name: Mycolicibacterium brumae


infraspecific_name: strain=CCUG 58730

organism_name: Mycolicibacterium goodii


infraspecific_name: strain=DSM 44833

organism_name: Mycobacterium hackensackense


infraspecific_name: strain=CCUG 46352

organism_name: Mycolicibacterium doricum


infraspecific_name: strain=DSM 44078

organism_name: Mycolicibacterium komossense


infraspecific_name: strain=DSM 46765

organism_name: Mycolicibacterium celeriflavum


infraspecific_name: strain=DSM 45255

organism_name: Mycobacterium mantenii


infraspecific_name: strain=CCUG 37460

organism_name: Mycobacterium tuberculosis variant bovis


infraspecific_name: strain=DSM 44942

organism_name: Mycolicibacter arupensis


infraspecific_name: strain=DSM 43991

organism_name: Mycolicibacterium flavescens


infraspecific_name: strain=DSM 45576

organism_name: Mycolicibacillus koreensis


infraspecific_name: strain=DSM 44585

organism_name: Mycolicibacterium poriferae


infraspecific_name: strain=CCUG 50398

organism_name: Mycobacterium barrassiae


infraspecific_name: strain=DSM 44623

organism_name: Mycobacterium intracellulare subsp. chimaera


infraspecific_name: strain=DSM 44223

organism_name: Mycolicibacterium rhodesiae


infraspecific_name: strain=DSM 45575

organism_name: Mycolicibacillus parakoreensis


infraspecific_name: strain=DSM 44017

organism_name: Mycolicibacterium confluentis


infraspecific_name: strain=DSM 44181

organism_name: Mycobacterium paraffinicum


infraspecific_name: strain=DSM 44152

organism_name: Mycobacterium shimoidei


infraspecific_name: strain=DSM 43656

organism_name: Mycolicibacterium senegalense


infraspecific_name: strain=DSM 43922

organism_name: Mycobacterium cookii


infraspecific_name: strain=DSM 45595

organism_name: Mycobacteroides immunogenum


infraspecific_name: strain=DSM 44553

organism_name: Mycobacterium parmense


infraspecific_name: strain=DSM 45643

organism_name: Mycolicibacterium sediminis


infraspecific_name: strain=DSM 44244

organism_name: Mycolicibacterium duvalii


infraspecific_name: strain=DSM 44679

organism_name: Mycolicibacterium neworleansense


infraspecific_name: strain=DSM 44634

organism_name: Mycobacterium haemophilum DSM 44634


infraspecific_name: strain=DSM 45102


infraspecific_name: strain=DSM 44556

organism_name: Mycolicibacterium fluoranthenivorans


infraspecific_name: strain=DSM 44242

organism_name: Mycolicibacterium porcinum


infraspecific_name: strain=DSM 45437

organism_name: Mycobacterium marseillense


infraspecific_name: strain=DSM 45394

organism_name: Mycolicibacter longobardus


infraspecific_name: strain=DSM 45000

organism_name: Mycobacterium paraseoulense


infraspecific_name: strain=DSM 44838

organism_name: Mycobacterium yunnanensis


infraspecific_name: strain=CCUG 55640

organism_name: Mycobacterium alsense


infraspecific_name: strain=DSM 45768

organism_name: Mycolicibacterium arabiense


infraspecific_name: strain=DSM 45731

organism_name: Mycobacterium fragae


infraspecific_name: strain=DSM 44602

organism_name: Mycobacterium montefiorense


infraspecific_name: strain=DSM 45578

organism_name: Mycolicibacterium bacteremicum


infraspecific_name: strain=DSM 44852

organism_name: Mycobacterium florentinum


infraspecific_name: strain=DSM 44676

organism_name: Mycolicibacterium houstonense


infraspecific_name: strain=DSM 45785

organism_name: Mycolicibacterium litorale


infraspecific_name: strain=DSM 44998

organism_name: Mycobacterium seoulense


infraspecific_name: strain=DSM 46749

organism_name: Mycobacterium paraense


isolate: Pig

organism_name: Escherichia coli


isolate: queso fresco en hoja de plantano sub 1

organism_name: Listeria monocytogenes


isolate: queso fresco en hoja de plantano sub 2


isolate: queso fresco en hoja de plantano sub 3


isolate: queso fresco en hoja de plantano sub 5


infraspecific_name: strain=Avian pathogenic E. coli 115


infraspecific_name: strain=Avian pathogenic E. coli 88


isolate: queso fresco en hoja de plantano sub 4


infraspecific_name: strain=Avian pathogenic E. coli 105


infraspecific_name: strain=Avian pathogenic E. coli 39


infraspecific_name: strain=Avian pathogenic E. coli 106


infraspecific_name: strain=Avian pathogenic E. coli 125


infraspecific_name: strain=Avian pathogenic E. coli 90


isolate: Bovine


isolate: Human


infraspecific_name: strain=Avian pathogenic E. coli 138


infraspecific_name: strain=Avian pathogenic E. coli 128


infraspecific_name: strain=Avian pathogenic E. coli 72


infraspecific_name: strain=Avian pathogenic E. coli 46


infraspecific_name: strain=Avian pathogenic E. coli 110


infraspecific_name: strain=Avian pathogenic E. coli 141


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


infraspecific_name: strain=Avian pathogenic E. coli 107


infraspecific_name: strain=Avian pathogenic E. coli 10


infraspecific_name: strain=Avian pathogenic E. coli 132


asm_submitter: CDC

organism_name: Salmonella enterica


isolate: E. coli


organism_name: Escherichia albertii


infraspecific_name: strain=Avian pathogenic E. coli 98


organism_name: Vibrio alginolyticus


infraspecific_name: strain=Avian pathogenic E. coli 13


asm_submitter: Bart's Health NHS Trust - The Royal London Hospital

organism_name: Acinetobacter baumannii


asm_submitter: Wageningen Bioveterinary Research


asm_submitter: Universidad Peruana Cayetano Heredia

organism_name: Pluralibacter gergoviae


asm_submitter: Nicolaus Copernicus University in Torun

organism_name: Bacillus paralicheniformis


asm_submitter: US Qgy

infraspecific_name: strain=USC WW 2022

organism_name: Aeromonas hydrophila


asm_submitter: University of Southern California

infraspecific_name: strain=USC WW2 2022

organism_name: Hafnia alvei


asm_submitter: Korea research institute of Bioscience and Biotechnology

organism_name: Reichenbachiella ulvae


asm_submitter: University of Ha'il

organism_name: Staphylococcus aureus


asm_submitter: Universidad Andres Bello

organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Salmonella enterica subsp. enterica serovar Corvallis


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica


organism_name: Salmonella enterica


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Shigella flexneri


asm_submitter: National Center for Biotechnology Information

infraspecific_name: strain=Avian pathogenic E. coli 7

organism_name: Escherichia coli


infraspecific_name: strain=Avian pathogenic E. coli 9


organism_name: Salmonella enterica subsp. enterica serovar Bovismorbificans


infraspecific_name: strain=Avian pathogenic E. coli 47


asm_submitter: Guangxi University of Science and Technology

organism_name: Pollutimonas sp. M17


organism_name: Microbacterium triticisoli


asm_submitter: University of Toronto

infraspecific_name: strain=DSM 15011

organism_name: Oceanotoga sp. DSM 15011


asm_submitter: Marian University College

organism_name: Bacillus subtilis


organism_name: Priestia megaterium


asm_submitter: University Potsdam, Hasso Plattner Institute

organism_name: Klebsiella pneumoniae


organism_name: Rhodococcus sacchari


asm_submitter: Lanzhou Jiaotong University

excluded_from_refseq: RefSeq annotation failed

infraspecific_name: strain=Bacillus velezensis F3A

organism_name: Bacillus velezensis


asm_submitter: Yangzhou University


organism_name: Pseudomonas sp. Z8(2022)


organism_name: Campylobacter jejuni


organism_name: Staphylococcus pseudintermedius


asm_submitter: CDC

organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Worthington


organism_name: Salmonella enterica subsp. enterica serovar Dublin


asm_submitter: Health Protection Agency

organism_name: Listeria monocytogenes


asm_submitter: Public Health Agency of Canada

organism_name: Neisseria meningitidis


organism_name: Salmonella enterica subsp. enterica serovar Anatum


asm_submitter: Robert Koch-Institute


asm_submitter: Heidelberg University Hospital

organism_name: Enterobacter hormaechei


annotation_name: Annotation submitted by University of Vienna

annotation_provider: University of Vienna

asm_submitter: University of Vienna

group: archaea

organism_name: Candidatus Lokiarchaeum ossiferum


asm_submitter: Julius Kuehn-Institut, Federal Research Centre for Cultivated Plants (JKI)

infraspecific_name: strain=KBI 423

organism_name: Brenneria izbisi


infraspecific_name: strain=KBI 447


organism_name: Enterococcus faecalis


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Enterococcus faecium


organism_name: Escherichia coli


organism_name: Vibrio alginolyticus


organism_name: Klebsiella pneumoniae


organism_name: Salmonella enterica subsp. enterica serovar London


asm_submitter: Center for Food Safety and Applied Nutrition


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: Vellore Institute of Technology

organism_name: Metabacillus halosaccharovorans


asm_submitter: Gansu Provincial People's Hospital


asm_submitter: FDA/CFSAN


asm_submitter: Nankai Universigy

excluded_from_refseq: contaminated; fragmented assembly

organism_name: Cronobacter sakazakii


asm_submitter: Canadian Research Institute for Food Safety

organism_name: Exiguobacterium sp. N5


organism_name: Salmonella enterica


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Reading


asm_submitter: National Center for Biotechnology Information

infraspecific_name: strain=Escherichia coli


asm_submitter: CDC


asm_submitter: University of Wisconsin-Madison

organism_name: Enterobacter hormaechei


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Escherichia coli


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


isolate: CVM N21C129

organism_name: Campylobacter coli


isolate: CVM N21C128


isolate: CVM N21C403


isolate: CVM N21C498


isolate: CVM N21C304


isolate: CVM N21C305


asm_submitter: USDA FSIS


isolate: CVM N21C306


asm_submitter: US Food and Drug Administration


organism_name: Listeria innocua


isolate: CVM N21C130


isolate: CVM N21C499


asm_submitter: FDA Center for Food Safety and Applied Nutrition


isolate: CVM N21C131


isolate: CVM N21C303


isolate: CVM N21C321


isolate: sub 2


isolate: CVM N21C213


isolate: sub 3


isolate: sub 5


isolate: sub 4


isolate: sub 1


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Enterococcus faecalis


organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: South China Agriculture University


asm_submitter: Yan'an University

organism_name: Paenibacillus sp. BT-177


organism_name: Alloboseaceae bacterium BT-24-1


organism_name: Pararhizobium sp. BT-229


organism_name: Salmonella enterica


organism_name: Brucella sp. HL-2


asm_submitter: FDA


organism_name: Rhizobium sp. BT-226


organism_name: Vibrio vulnificus


organism_name: Paeniglutamicibacter sp. ZC-3


organism_name: Pararhizobium sp. YC-54


asm_submitter: Institute of Microbiology, Chinese Academy of Sciences

organism_name: Flavobacterium shii


organism_name: Flavobacterium frigoritolerans


asm_submitter: Faculty of Pharmacy, Belgrade University

organism_name: Acinetobacter baumannii


excluded_from_refseq: annotation fails completeness check


asm_submitter: Volgograd Plague Control Research Institute

organism_name: Burkholderia pseudomallei


organism_name: Pseudomonas sp. BT-42-2


asm_submitter: Institute of Primate Research

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Escherichia coli


asm_submitter: National Technical University of Athens (NTUA)

organism_name: Bacillus subtilis


asm_submitter: Harbin Meihua Biotechnology Co., LTD

organism_name: Lactiplantibacillus plantarum


asm_submitter: Yangzhou University

organism_name: Enterococcus faecium


excluded_from_refseq: contaminated


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Listeria monocytogenes


isolate: CVM N21C497

organism_name: Campylobacter coli


organism_name: Salmonella enterica


asm_submitter: National Center for Biotechnology Information


organism_name: Salmonella enterica subsp. enterica serovar Banana


asm_submitter: Health Protection Agency


asm_submitter: CDC


organism_name: Vibrio cholerae


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Shigella sonnei


organism_name: Shigella flexneri


organism_name: Campylobacter jejuni


organism_name: Vibrio parahaemolyticus


asm_submitter: Vet-LIRN-CVM-FDA


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica


organism_name: Acinetobacter baumannii


asm_submitter: Centers for Disease Control and Prevention


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Listeria monocytogenes


organism_name: Escherichia coli


organism_name: Salmonella enterica


asm_submitter: Qingdao University

excluded_from_refseq: partial

genome_rep: Partial

organism_name: Lactobacillus gasseri


asm_submitter: The Independent Schools Foundation Academy

organism_name: Pantoea dispersa


asm_submitter: All-Russia Research Institute of Agricultural Biotechnology

organism_name: Xanthomonas campestris pv. campestris


asm_submitter: Qilu University of Technology (Shandong Academy of Sciences)

organism_name: Pseudomonas asiatica


asm_submitter: Utah Public Health Laboratory Infectious Disease submission group


asm_submitter: Nanjing University

organism_name: Streptomyces peucetius


asm_submitter: Xi'an Jiaotong University


asm_submitter: Yunnan University

infraspecific_name: strain=YIM 151497

organism_name: Pelagibacterium flavum


organism_name: Limosilactobacillus reuteri


organism_name: Glutamicibacter sp. JL.03c


asm_submitter: FDA


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


asm_submitter: FDA Center for Food Safety and Applied Nutrition


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


asm_submitter: FDA/CFSAN

organism_name: Cronobacter sakazakii


asm_submitter: Korea Research Institute of Bioscience and Biotechnology

organism_name: Leisingera thetidis


asm_submitter: Zhejiang A&F University

organism_name: Bacillus velezensis


asm_submitter: CDC

organism_name: Escherichia coli


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


asm_submitter: Center for Food Safety and Applied Nutrition


asm_submitter: Michigan Department of Health and Human Services


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Vibrio navarrensis


organism_name: Klebsiella pneumoniae


organism_name: Vibrio alginolyticus


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


asm_submitter: National Institute of Agricultural Science, RDA

organism_name: Ralstonia pseudosolanacearum


asm_submitter: National Center for Biotechnology Information

isolate: Human


organism_name: Acinetobacter baumannii


isolate: sub 6

organism_name: Listeria innocua


asm_submitter: Helmholtz - Centre for Environmental Research

infraspecific_name: strain=PCC 7712

organism_name: Tolypothrix sp. PCC 7712


organism_name: Enterococcus faecium


organism_name: Clostridioides difficile


organism_name: Proteus mirabilis


excluded_from_refseq: unverified source organism; from large multi-isolate project

organism_name: Providencia rettgeri


organism_name: Klebsiella oxytoca


organism_name: Escherichia coli


organism_name: Vibrio parahaemolyticus


organism_name: Vibrio vulnificus


organism_name: Shigella flexneri


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Listeria monocytogenes


organism_name: Enterobacter hormaechei


organism_name: Pseudomonas aeruginosa


asm_submitter: Microbiological Diagnostic Unit Public Health Laboratory

organism_name: Campylobacter lari


asm_submitter: South China Agricultural University

organism_name: Staphylococcus aureus


asm_submitter: Policlinico Sant'Orsola-Malpighi

organism_name: Klebsiella pneumoniae


asm_submitter: National University of Agriculture and Life Sciences

isolate: bin C_3_4

organism_name: Rhodococcus sp. (in: high G+C Gram-positive bacteria)


isolate: bin C_3_2

organism_name: Sphingopyxis sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

isolate: bin C_3_1

organism_name: Pseudonocardia sp.


excluded_from_refseq: derived from metagenome

isolate: bin C_3_3

organism_name: Achromobacter sp.


excluded_from_refseq: contaminated; derived from metagenome

isolate: bin D_3_4

organism_name: Rhodanobacter thiooxydans


isolate: bin D_3_2

organism_name: Zavarzinia sp.


isolate: bin D_3_3

organism_name: Prosthecobacter sp.


isolate: bin D_3_1

organism_name: Ferrovibrio sp.


asm_submitter: USDA FSIS

organism_name: Campylobacter jejuni


organism_name: Escherichia coli


organism_name: Salmonella enterica


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


asm_submitter: NJ DOH Public Health Laboratories microbial pathogen submission group

organism_name: Vibrio vulnificus


organism_name: Vibrio parahaemolyticus


organism_name: Listeria monocytogenes


asm_submitter: Centers for Disease Control and Prevention


organism_name: Clostridioides difficile


organism_name: Klebsiella pneumoniae


organism_name: Citrobacter freundii


organism_name: Klebsiella oxytoca


organism_name: Enterobacter hormaechei


organism_name: Escherichia coli


organism_name: Enterobacter cloacae


organism_name: Klebsiella quasipneumoniae subsp. similipneumoniae


organism_name: Klebsiella michiganensis


organism_name: Citrobacter sedlakii


organism_name: Enterobacter kobei


organism_name: Proteus mirabilis


organism_name: Klebsiella quasipneumoniae subsp. quasipneumoniae


organism_name: Morganella morganii


organism_name: Salmonella enterica


asm_submitter: Institute of Antibiotics


asm_submitter: University of Copenhagen

organism_name: Duffyella gerundensis


annotation_name: Annotation submitted by Chinese Academy of Agricultural Sciences

organism_name: Pantoea ananatis


annotation_provider: Chinese Academy of Agricultural Sciences


asm_submitter: Chinese Academy of Agricultural Sciences


organism_name: Pantoea dispersa


organism_name: Xanthomonas sacchari


organism_name: Klebsiella pneumoniae


organism_name: Klebsiella variicola


organism_name: Klebsiella oxytoca


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


asm_submitter: FDA/CFSAN

organism_name: Listeria monocytogenes


asm_submitter: RDA

organism_name: Ralstonia solanacearum


asm_submitter: Iowa State University

organism_name: Avibacterium paragallinarum


asm_submitter: Jiangsu Academy of Agricultural Sciences

organism_name: Acholeplasma laidlawii


asm_submitter: National Center for Biotechnology Information

organism_name: Klebsiella quasipneumoniae


asm_submitter: FDA Center for Food Safety and Applied Nutrition

isolate: enoki mushroom sub 14

organism_name: Listeria innocua


isolate: queso fresco sub 1


isolate: enoki mushroom sub 18


isolate: enoki mushroom sub 9


asm_submitter: Kingston University London, United Kingdom

organism_name: Campylobacter jejuni


isolate: enoki mushroom sub 12


isolate: enoki mushroom sub 11


isolate: enoki mushroom sub 13


isolate: enoki mushroom sub 15


isolate: enoki mushroom sub 16


isolate: enoki mushroom sub 17


isolate: queso fresco sub 2


isolate: queso fresco sub 3


isolate: queso fresco sub 5


isolate: enoki mushroom sub 3


isolate: queso fresco sub 7


isolate: queso fresco sub 10


isolate: queso fresco sub 9


isolate: enoki mushroom sub 4


isolate: queso fresco sub 8


isolate: enoki mushroom sub 7


isolate: enoki mushroom sub 1


isolate: enoki mushroom sub 8


isolate: queso fresco sub 4


isolate: enoki mushroom sub 10


isolate: enoki mushroom sub 2


isolate: enoki mushroom sub 5


isolate: queso fresco sub 6


isolate: enoki mushroom sub 6


asm_submitter: CDC


organism_name: Escherichia coli