annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: National Center for Biotechnology Information

assembly_level: Contig

assembly_type: haploid

excluded_from_refseq: from large multi-isolate project

genome_rep: Full

group: bacteria

organism_name: Klebsiella pneumoniae

release_type: Major

version_status: latest


asm_submitter: Center for Food Safety and Applied Nutrition

organism_name: Salmonella enterica


asm_submitter: CDC


organism_name: Klebsiella oxytoca


organism_name: Klebsiella michiganensis


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Escherichia coli


organism_name: Pseudomonas aeruginosa


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Citrobacter freundii


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Vibrio parahaemolyticus


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Proteus mirabilis


organism_name: Enterococcus faecalis


organism_name: Enterococcus faecium


organism_name: Acinetobacter baumannii


organism_name: Klebsiella pneumoniae


infraspecific_name: strain=microbial


organism_name: Klebsiella variicola


organism_name: Klebsiella quasipneumoniae subsp. similipneumoniae


asm_submitter: USDA FSIS


organism_name: Campylobacter coli


organism_name: Escherichia coli


asm_submitter: Laboratorio de Microbiologia

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Vibrio chagasii


isolate: Urine


isolate: CSF


organism_name: Campylobacter jejuni


organism_name: Pseudomonas aeruginosa


organism_name: Shigella sonnei


organism_name: Salmonella enterica


organism_name: Shigella flexneri


isolate: Stool


asm_submitter: Health Protection Agency


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar London


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Vibrio parahaemolyticus


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


organism_name: Salmonella enterica subsp. enterica serovar Lubbock


organism_name: Escherichia coli


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Panama


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Ohio


asm_submitter: FDA Center for Food Safety and Applied Nutrition


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica


organism_name: Shigella sonnei


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: Third Institute of Oceanography, Ministry of Natural Resources

organism_name: Halomonas sp. S3-1-8

paired_asm_comp: identical


organism_name: Salinicola avicenniae


organism_name: Acinetobacter baumannii


organism_name: Campylobacter jejuni


organism_name: Vibrio parahaemolyticus


organism_name: Enterobacter hormaechei


organism_name: Klebsiella aerogenes


organism_name: Enterobacter kobei


organism_name: Enterobacter roggenkampii


organism_name: Enterobacter cloacae


excluded_from_refseq: unverified source organism; from large multi-isolate project

organism_name: Enterobacter cancerogenus


organism_name: Enterobacter asburiae


organism_name: Campylobacter fetus


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Escherichia coli


asm_submitter: PulseNet Next Generation Subtyping Methods Unit

organism_name: Cronobacter sakazakii


asm_submitter: Northeast Normal University

assembly_level: Complete Genome

organism_name: Pseudomonas putida


asm_submitter: Renmin Hospital of Wuhan University

organism_name: Klebsiella pneumoniae


asm_submitter: Wuhan Wecare Probiotic Research Institute Co., Ltd

organism_name: Weizmannia sp. WK01


asm_submitter: Chosun University

infraspecific_name: strain=KCOM 3500

organism_name: Treponema denticola


organism_name: Clostridioides difficile


asm_submitter: Nanjing Agricultural University

organism_name: Riemerella anatipestifer


asm_submitter: Shandong University

organism_name: Gaoshiqia sediminis

refseq_category: reference genome

relation_to_type_material: assembly from type material


asm_submitter: P.G. Demidov Yaroslavl State University

assembly_level: Scaffold

organism_name: Aeromonas piscicola


asm_submitter: Public Health Agency of Canada

organism_name: Neisseria meningitidis


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


asm_submitter: School of Life Sciences, Sun Yat-sen University

organism_name: Bacillus safensis


asm_submitter: Texas Tech University

organism_name: Lactococcus garvieae


asm_submitter: Inner Mongolia Minzu University


asm_submitter: Robert Koch-Institute

organism_name: Campylobacter coli


annotation_name: Annotation submitted by Universite Laval

annotation_provider: Universite Laval

asm_submitter: Universite Laval

organism_name: Pseudomonas paraeruginosa


asm_submitter: CSIR CFTRI

assembly_level: Chromosome

infraspecific_name: strain=KRGSERBCFTRI

organism_name: Bifidobacterium sp. KRGSERBCFTRI


asm_submitter: Yuan's General Hospital

excluded_from_refseq: unverified source organism

organism_name: Enterobacter cloacae


asm_submitter: Shanghai Normal University

organism_name: Streptomyces milbemycinicus


asm_submitter: National Center of Infectious and Parasitic Diseases

infraspecific_name: strain=BCG Pasteur ATCC 35734

organism_name: Mycobacterium tuberculosis variant bovis


asm_submitter: Yangzhou University

organism_name: Klebsiella pneumoniae


asm_submitter: University of Liverpool

organism_name: Shigella sonnei


asm_submitter: Qufu Normal University

organism_name: Brucella sp. MAB-22


asm_submitter: Chung-Ang university

infraspecific_name: strain=LMG 11983

organism_name: Weissella sp. LMG 11983


asm_submitter: Loyola University Chicago

organism_name: Streptococcus anginosus


infraspecific_name: strain=KACC 18534

organism_name: Weissella ceti


asm_submitter: The Second Affiliated Hospital of Zhejiang University School of Medicine, Zhejiang University

organism_name: Citrobacter freundii


organism_name: Weissella fermenti


excluded_from_refseq: derived from metagenome


asm_submitter: South China Agriculture University

organism_name: Escherichia coli


asm_submitter: Oregon State University

organism_name: Streptomyces sp. RS2


asm_submitter: Henan University of Technology

organism_name: Flavobacterium lacisediminis


asm_submitter: Sanigen

organism_name: Staphylococcus aureus


asm_submitter: University of Minnesota

organism_name: Priestia sp. JV24


organism_name: Pantoea sp. JV6


organism_name: Pantoea sp. RG18


asm_submitter: Teaching hospital of Caen Normandy

organism_name: Pseudomonas aeruginosa


organism_name: Pseudomonas sp. RG1


asm_submitter: Bangladesh Agricultural University

organism_name: Staphylococcus gallinarum


asm_submitter: Yan'an University

organism_name: Agrobacterium sp. BT-220-3


asm_submitter: CDC

organism_name: Salmonella enterica


asm_submitter: Health Protection Agency

organism_name: Shigella sonnei


organism_name: Shigella flexneri


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Litchfield


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Rissen


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


asm_submitter: FDA/CFSAN


asm_submitter: National Center for Biotechnology Information

organism_name: Legionella pneumophila


organism_name: Vibrio cholerae


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Meleagridis


organism_name: Salmonella enterica subsp. enterica serovar Kiambu


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Brandenburg


organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


organism_name: Shigella boydii


organism_name: Escherichia coli


organism_name: Shigella flexneri


asm_submitter: Chinese Academy of Agricultural Sciences

organism_name: Priestia megaterium


asm_submitter: Jiangsu University

excluded_from_refseq: genome length too small; not used as type

group: archaea

organism_name: Halocatena marina


asm_submitter: Yangzhou University

organism_name: Enterococcus faecium


organism_name: Enterococcus hirae


asm_submitter: Zhejiang Academy of Agricultural Sciences

organism_name: Serratia marcescens


organism_name: Campylobacter coli


excluded_from_refseq: contaminated; from large multi-isolate project


organism_name: Shigella sonnei


organism_name: Escherichia albertii


asm_submitter: National Chung Hsing University

infraspecific_name: strain=DSM 15122

organism_name: Methanoculleus submarinus


asm_submitter: Guangdong Academy of Sciences

organism_name: Bacillus velezensis


asm_submitter: Jiangsu Academy of Agricultural Sciences

infraspecific_name: strain=XP

organism_name: Bacillus subtilis


asm_submitter: Jiangnan University

infraspecific_name: strain=YSD YN2

organism_name: Siccibacter colletis


asm_submitter: Washington University in St Louis

organism_name: Bacteroides sp. DH3716P


organism_name: Bacteroides salyersiae


organism_name: Bacteroides nordii


organism_name: Bacteroides uniformis


organism_name: Bacteroides thetaiotaomicron


organism_name: Bacteroides faecis


organism_name: Escherichia coli


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Salmonella enterica subsp. enterica serovar Ohio


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


asm_submitter: Center for Food Safety and Applied Nutrition

organism_name: Salmonella enterica


asm_submitter: Chung-Ang university

organism_name: Phycobium rhodophyticola


asm_submitter: Universidad El Bosque

organism_name: Providencia rettgeri


asm_submitter: EXCALIBUR

organism_name: Paenibacillus polymyxa


asm_submitter: Hangzhou Traditional Chinese Medicine Hospital

organism_name: Acinetobacter baumannii


organism_name: Enterococcus faecium


organism_name: Bacteroides fragilis


asm_submitter: University of Guayaquil

organism_name: Mycobacterium tuberculosis


asm_submitter: Fundacion Universitaria San Pablo CEU

organism_name: Bacillus pretiosus


organism_name: Phocaeicola dorei


asm_submitter: USDA FSIS

organism_name: Campylobacter jejuni


asm_submitter: CDC

organism_name: Vibrio cholerae


organism_name: Phycisphaera sp.


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Campylobacter coli


organism_name: Enterococcus faecalis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


asm_submitter: University of Neuchatel

organism_name: Porphyrobacter sp. ULC335


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Reading


organism_name: Pseudomonas agronomica


asm_submitter: Qinghai University

organism_name: Halomonas qaidamensis


asm_submitter: iFUNFoods

organism_name: Lacticaseibacillus paracasei subsp. paracasei


excluded_from_refseq: genome length too small

organism_name: Lactiplantibacillus pentosus


asm_submitter: Guizhou University of Traditional Medicine

organism_name: Bacillus velezensis


asm_submitter: China Agricultural University

organism_name: Bacillus cereus


asm_submitter: German Federal Institute for Risk Assessment

organism_name: Vibrio parahaemolyticus


asm_submitter: Technology Center of Zhanjiang Customs District P.R.China

organism_name: Vibrio owensii


asm_submitter: Wuxi Second People's Hospital

organism_name: Klebsiella pneumoniae


asm_submitter: Insititute of Plant Protection

infraspecific_name: strain=ZQ

organism_name: Acaricomes phytoseiuli


organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


asm_submitter: Chinese Academy of Agricultural Sciences

organism_name: Priestia megaterium


asm_submitter: The Independent Schools Foundation Academy

organism_name: Pantoea dispersa


asm_submitter: Institute of Marine Research

organism_name: Shewanella baltica


asm_submitter: Nation Chung Hsing University

organism_name: Flavobacterium agricola


asm_submitter: Institute of Microbiology, Chinese Academy of Sciences

organism_name: Paenarthrobacter ureafaciens


asm_submitter: IFSC USP

organism_name: Staphylococcus aureus


organism_name: Acinetobacter baumannii


excluded_from_refseq: annotation fails completeness check


infraspecific_name: strain=ATCC 19606


excluded_from_refseq: fragmented assembly


infraspecific_name: strain=ATCC 25923


organism_name: Vibrio parahaemolyticus


asm_submitter: Qingdao Agricultural Universtiy

organism_name: Klebsiella pneumoniae subsp. pneumoniae


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


asm_submitter: Public Health Agency of Canada

organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Corvallis


asm_submitter: National Center for Biotechnology Information

organism_name: Clostridioides difficile


asm_submitter: The University of Texas at Austin

organism_name: Candidatus Parvarchaeum tengchongense


excluded_from_refseq: derived from metagenome; fragmented assembly


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Candidatus Parvarchaeota archaeon


organism_name: Candidatus Rehaiarchaeum fermentans


organism_name: Klebsiella pneumoniae


organism_name: Candidatus Haiyanarchaeum thermophilum


excluded_from_refseq: contaminated; derived from metagenome


asm_submitter: Stavanger University Hospital


organism_name: Pseudomonas aeruginosa


asm_submitter: CAU

organism_name: Nitrososphaera sp.


organism_name: Nitrososphaeraceae archaeon


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined


organism_name: Binatia bacterium (SeqCode)


organism_name: Gemmatimonadota bacterium


organism_name: Gemmatimonadaceae bacterium


organism_name: Lysobacteraceae bacterium


organism_name: Pyrinomonadaceae bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Candidatus Methylomirabilota bacterium


organism_name: Chryseolinea sp.


organism_name: Fimbriimonadales bacterium


organism_name: Thermoleophilia bacterium


organism_name: Chitinophagaceae bacterium


organism_name: Burkholderiales bacterium


organism_name: Vicinamibacteria bacterium


organism_name: Pseudoxanthomonas sp.


organism_name: Gemmatimonadales bacterium


organism_name: Candidatus Krumholzibacteriia bacterium


organism_name: Propionibacteriaceae bacterium


organism_name: Sorangium sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Flavobacterium johnsoniae


organism_name: Binatia bacterium (SeqCode)


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome


organism_name: Nitrososphaeraceae archaeon


organism_name: Steroidobacteraceae bacterium


organism_name: Phycisphaerae bacterium


organism_name: Nitrososphaera sp.


organism_name: Dermatophilaceae bacterium


organism_name: Nocardioidaceae bacterium


organism_name: Micromonosporaceae bacterium


organism_name: Chloroflexia bacterium


organism_name: Bryobacteraceae bacterium


organism_name: Pirellulales bacterium


organism_name: Jatrophihabitans sp.


organism_name: Gemmatimonadaceae bacterium


organism_name: Nocardioides sp.


organism_name: Thermomicrobiales bacterium


organism_name: Fimbriimonadaceae bacterium


organism_name: Burkholderiales bacterium


organism_name: Pseudonocardiaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Thermoleophilaceae bacterium


organism_name: Chitinophagaceae bacterium


organism_name: Rhodanobacteraceae bacterium


organism_name: Arthrobacter sp.


organism_name: Candidatus Saccharimonadota bacterium


organism_name: Chloroflexota bacterium


organism_name: Nitrososphaeraceae archaeon


organism_name: Nitrosopumilaceae archaeon


organism_name: Pseudomonas aeruginosa


organism_name: Gemmatimonadales bacterium


organism_name: Thermoleophilia bacterium


organism_name: Acidothermaceae bacterium


organism_name: Ktedonobacterales bacterium


organism_name: Mycobacterium sp.


organism_name: Phenylobacterium sp.


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


organism_name: Enterobacter kobei


organism_name: Burkholderiales bacterium


organism_name: Enterobacter hormaechei


organism_name: Chthoniobacterales bacterium


organism_name: Actinomycetospora sp.


asm_submitter: CDC

organism_name: Salmonella enterica


organism_name: Enterobacter roggenkampii


organism_name: Enterobacter hormaechei subsp. xiangfangensis


organism_name: Enterobacter hormaechei subsp. steigerwaltii


organism_name: Enterobacter asburiae


organism_name: Klebsiella pneumoniae


organism_name: Enterobacter hormaechei subsp. hoffmannii


organism_name: Enterobacter cloacae subsp. dissolvens


organism_name: Enterobacter cloacae


organism_name: Escherichia coli


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Candidatus Saccharimonadota bacterium


organism_name: Thermoleophilia bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Pirellulales bacterium


organism_name: Gemmatimonadaceae bacterium


organism_name: Hyphomicrobium sp.


organism_name: Solirubrobacteraceae bacterium


organism_name: Gemmatimonadales bacterium


organism_name: Bryobacteraceae bacterium


organism_name: Nocardioidaceae bacterium


organism_name: Frankiaceae bacterium


organism_name: Sphingomonas sp.


organism_name: Steroidobacteraceae bacterium


organism_name: Terriglobales bacterium


organism_name: Ktedonobacterales bacterium


organism_name: Solirubrobacterales bacterium


organism_name: Burkholderiales bacterium


organism_name: Parafilimonas sp.


organism_name: Jatrophihabitans sp.


organism_name: Acidobacteriaceae bacterium


organism_name: Nocardioides sp.


organism_name: Chloroflexia bacterium


organism_name: Phycisphaerae bacterium


organism_name: Thermomicrobiales bacterium


organism_name: Rhodanobacteraceae bacterium


organism_name: Bryobacteraceae bacterium


organism_name: Nitrospira sp.


organism_name: Thermoleophilia bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Candidatus Saccharimonadota bacterium


organism_name: Chitinophagaceae bacterium


organism_name: Gemmatimonadaceae bacterium


organism_name: Thermoanaerobaculia bacterium


organism_name: Thermoleophilaceae bacterium


organism_name: Ktedonobacteraceae bacterium


organism_name: Propionibacteriales bacterium


organism_name: Candidatus Sulfotelmatobacter sp.


organism_name: Solirubrobacteraceae bacterium


organism_name: Pedococcus sp.


organism_name: Chloroflexota bacterium


organism_name: Thermomicrobiales bacterium


organism_name: Acidobacteriaceae bacterium


organism_name: Rhodanobacteraceae bacterium


organism_name: Steroidobacteraceae bacterium


organism_name: Thermoleophilia bacterium


organism_name: Gemmatimonadales bacterium


organism_name: Pseudolabrys sp.


organism_name: Terriglobales bacterium


organism_name: Ktedonobacterales bacterium


organism_name: Thermoanaerobaculia bacterium


organism_name: Mycobacterium sp.


organism_name: Nocardioides sp.


organism_name: Parafilimonas sp.


organism_name: Ktedonobacteraceae bacterium


organism_name: Actinomycetes bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Chryseolinea sp.


organism_name: Gemmatimonadota bacterium


organism_name: Propionibacteriales bacterium


organism_name: Nitrososphaeraceae archaeon


organism_name: Nitrospira sp.


organism_name: Acidobacteriaceae bacterium


organism_name: Chthoniobacterales bacterium


organism_name: Frankiales bacterium


organism_name: Pseudolabrys sp.


organism_name: Gemmatimonadaceae bacterium


organism_name: Chloroflexota bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Nocardioidaceae bacterium


organism_name: Frankiaceae bacterium


organism_name: Pirellulales bacterium


organism_name: Terriglobales bacterium


organism_name: Chloroflexia bacterium


organism_name: Mucilaginibacter sp.


organism_name: Thermoleophilia bacterium


organism_name: Bryobacteraceae bacterium


organism_name: Nostocoides sp.


organism_name: Parafilimonas sp.


organism_name: Nitrososphaera sp.


organism_name: Gemmatimonadales bacterium


organism_name: Nitrolancea sp.


organism_name: Steroidobacter sp.


organism_name: Xanthobacteraceae bacterium


organism_name: Chitinophagaceae bacterium


organism_name: Pyrinomonadaceae bacterium


organism_name: Minisyncoccota bacterium


organism_name: Gemmatimonadota bacterium


organism_name: Anaerolineae bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Burkholderiales bacterium


organism_name: Gemmatimonadaceae bacterium


organism_name: Nocardioidaceae bacterium


organism_name: Thermoleophilia bacterium


organism_name: Shigella flexneri


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Actinomycetes bacterium


organism_name: Chloroflexota bacterium


organism_name: Nitrososphaeraceae archaeon


organism_name: Nitrosarchaeum sp.


organism_name: Clostridioides difficile


organism_name: Nitrososphaera sp.


organism_name: Chryseolinea sp.


organism_name: Pyrinomonadaceae bacterium


organism_name: Vicinamibacteria bacterium


organism_name: Pseudoxanthomonas sp.


organism_name: Chitinophagaceae bacterium


organism_name: Burkholderiales bacterium


organism_name: Gemmatimonadales bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Thermoleophilia bacterium


organism_name: Gemmatimonadota bacterium


organism_name: Gemmatimonadaceae bacterium


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Klebsiella pneumoniae


organism_name: Enterobacter kobei


organism_name: Enterobacter asburiae


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Agona


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Morganella morganii


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Enterobacter cloacae subsp. dissolvens


organism_name: Enterobacter roggenkampii


organism_name: Salmonella enterica


organism_name: Shigella flexneri


organism_name: Enterobacter hormaechei subsp. xiangfangensis


organism_name: Enterobacter hormaechei subsp. steigerwaltii


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Enterobacter cloacae subsp. cloacae


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Clostridioides difficile


organism_name: Klebsiella pneumoniae


organism_name: Pseudomonas aeruginosa


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Escherichia coli


asm_submitter: Anses

excluded_from_refseq: from large multi-isolate project; many frameshifted proteins

organism_name: Campylobacter jejuni


organism_name: Candidatus Saccharimonadota bacterium


organism_name: Rhodanobacteraceae bacterium


organism_name: Chitinophagaceae bacterium


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Mycolicibacter sinensis


organism_name: Terriglobales bacterium


organism_name: Modestobacter sp.


organism_name: Thermoleophilia bacterium


organism_name: Mycobacterium sp.


organism_name: Chthoniobacterales bacterium


organism_name: Bryobacteraceae bacterium


organism_name: Gemmatimonadales bacterium


organism_name: Gemmatimonadaceae bacterium


organism_name: Nitrosotalea sp.


organism_name: Myxococcota bacterium


organism_name: Acidobacteriaceae bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Arthrobacter sp.


organism_name: Fimbriimonadaceae bacterium


organism_name: Nocardioidaceae bacterium


organism_name: Actinospica sp.


organism_name: Thermomicrobiales bacterium


organism_name: Phenylobacterium sp.


organism_name: Acidothermaceae bacterium


organism_name: Streptosporangiaceae bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Solirubrobacteraceae bacterium


organism_name: Actinomycetes bacterium


organism_name: Rudaea sp.


organism_name: Mucilaginibacter sp.


organism_name: Chitinophagaceae bacterium


organism_name: Candidatus Nitrosocosmicus sp.


organism_name: Rhodanobacteraceae bacterium


organism_name: Verrucomicrobiia bacterium


organism_name: Thermoleophilia bacterium


organism_name: Polyangiaceae bacterium


organism_name: Nitrospiraceae bacterium


organism_name: Vulcanimicrobiia bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Candidatus Saccharimonadota bacterium


organism_name: Terriglobales bacterium


organism_name: Chthoniobacterales bacterium


organism_name: Gemmatimonadaceae bacterium


organism_name: Fimbriimonadaceae bacterium


organism_name: Mycobacterium sp.


organism_name: Ktedonobacteraceae bacterium


organism_name: Nocardioidaceae bacterium


organism_name: Nitrospira sp.


organism_name: Gemmatimonadales bacterium


organism_name: Propionibacteriales bacterium


organism_name: Nostocoides sp.


organism_name: Frankiales bacterium


organism_name: Nitrososphaeraceae archaeon


organism_name: Ktedonobacterales bacterium


organism_name: Arthrobacter sp.


organism_name: Burkholderiales bacterium


organism_name: Thermoleophilia bacterium


organism_name: Chloroflexota bacterium


organism_name: Anaerolineales bacterium


organism_name: Nitrososphaera sp.


organism_name: Pyrinomonadaceae bacterium


organism_name: Sphingomonas sp.


organism_name: Steroidobacteraceae bacterium


organism_name: Fibrobacteria bacterium


organism_name: Nocardioidaceae bacterium


organism_name: Solirubrobacteraceae bacterium


organism_name: Chthoniobacterales bacterium


organism_name: Vicinamibacteria bacterium


organism_name: Streptosporangiaceae bacterium


organism_name: Gemmatimonadales bacterium


organism_name: Pirellulales bacterium


organism_name: Mycobacterium sp.


organism_name: Gemmatimonadaceae bacterium


organism_name: Terriglobales bacterium


organism_name: Polyangiaceae bacterium


organism_name: Nitrospira sp.


organism_name: Candidatus Sulfotelmatobacter sp.


organism_name: Thermomicrobiales bacterium


organism_name: Rhodanobacteraceae bacterium


organism_name: Phycisphaerae bacterium


organism_name: Flavisolibacter sp.


organism_name: Chitinophagaceae bacterium


organism_name: Burkholderiales bacterium


organism_name: Modestobacter sp.


organism_name: Nocardioides sp.


organism_name: Nocardioidaceae bacterium


organism_name: Bradyrhizobium sp.


organism_name: Ktedonobacterales bacterium


organism_name: Pseudonocardiaceae bacterium


organism_name: Thermoleophilia bacterium


organism_name: Thermoleophilaceae bacterium


organism_name: Gemmatimonadaceae bacterium


organism_name: Propionibacteriales bacterium


organism_name: Gemmatimonadales bacterium


organism_name: Candidatus Sulfotelmatobacter sp.


organism_name: Pedococcus sp.


organism_name: Bryobacteraceae bacterium


organism_name: Vicinamibacteria bacterium


organism_name: Sphingomonas sp.


organism_name: Chloroflexia bacterium


organism_name: Terriglobales bacterium


organism_name: Amnibacterium sp.


organism_name: Solirubrobacterales bacterium


organism_name: Chthoniobacterales bacterium


organism_name: Ktedonobacterales bacterium


organism_name: Parafilimonas sp.


organism_name: Ktedonobacteraceae bacterium


organism_name: Nocardioides sp.


organism_name: Nitrososphaeraceae archaeon


organism_name: Fimbriimonadaceae bacterium


organism_name: Thermoleophilia bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Thermoanaerobaculia bacterium


organism_name: Mycobacterium sp.


organism_name: Vicinamibacteria bacterium


organism_name: Pseudonocardiaceae bacterium


organism_name: Thermoleophilaceae bacterium


organism_name: Phycisphaerae bacterium


organism_name: Gemmatimonadaceae bacterium


organism_name: Burkholderiales bacterium


organism_name: Gemmatimonadota bacterium


organism_name: Chloroflexia bacterium


organism_name: Polyangiaceae bacterium


organism_name: Steroidobacter sp.


organism_name: Microcoleus sp. TY_ISSM_2_bin.22


organism_name: Gemmatimonadales bacterium


organism_name: Nitrososphaera sp.


organism_name: Pyrinomonadaceae bacterium


organism_name: Nitrososphaeraceae archaeon


organism_name: Acidimicrobiia bacterium


organism_name: Anaerolineales bacterium


organism_name: Chloroflexota bacterium


organism_name: Thermoleophilia bacterium


organism_name: Thermomicrobiales bacterium


organism_name: Binatia bacterium (SeqCode)


organism_name: Nitrosospira sp.


organism_name: Nocardioidaceae bacterium


organism_name: Microcoleus sp. TY_HY_2_bin.32


organism_name: Vicinamibacteria bacterium


asm_submitter: Nakdonggang National Institute of Biological Resource

organism_name: Novosphingobium sp. JCM 18896


asm_submitter: United States Department of Agriculture

organism_name: Candidatus Liberibacter asiaticus


asm_submitter: Ottawa Research and Development Center

organism_name: Rhizobium acaciae


asm_submitter: University of Maine

organism_name: Streptococcus agalactiae


organism_name: Novosphingobium sp. KCTC 2891


asm_submitter: Monash University Malaysia

organism_name: Acinetobacter baumannii


asm_submitter: Tecnologico de Monterrey

organism_name: Klebsiella pneumoniae


organism_name: Citrobacter freundii


asm_submitter: Chung-Ang university

excluded_from_refseq: contaminated

organism_name: Novosphingobium sp. MW5


organism_name: Campylobacter jejuni


excluded_from_refseq: unverified source organism; from large multi-isolate project; many frameshifted proteins


excluded_from_refseq: from large multi-isolate project


excluded_from_refseq: contaminated; from large multi-isolate project; many frameshifted proteins


asm_submitter: Phigenics LLc

organism_name: Legionella sp. 515359


asm_submitter: Faculty of Pharmacy, Belgrade University


asm_submitter: Chinese Academy of Agricultural Sciences

organism_name: Pantoea ananatis


asm_submitter: Rochester Institute of Technology

organism_name: Brachybacterium squillarum


excluded_from_refseq: unverified source organism

organism_name: Enterobacter asburiae


organism_name: Enterococcus faecium


organism_name: Bacillus xiamenensis


asm_submitter: Research Center of Biotechnology RAS

organism_name: Prosthecodimorpha hirschii


asm_submitter: Hospital La Paz

organism_name: Mycolicibacterium senegalense


asm_submitter: Shandong University

organism_name: Pseudoalteromonas sp. A3


asm_submitter: Policlinico Sant'Orsola-Malpighi


asm_submitter: This work was supported by PHC Toubkal/15/19-32545NB French Moroccan project

organism_name: Caenicola nitritireducens


asm_submitter: SYNBIOGAS Project

organism_name: Anaerorudis cellulosivorans


asm_submitter: Centers for Disease Control and Prevention


asm_submitter: CDC

organism_name: Salmonella enterica


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


asm_submitter: Health Protection Agency

organism_name: Listeria monocytogenes


organism_name: Escherichia coli


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Proteus mirabilis


asm_submitter: Center for Food Safety and Applied Nutrition


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Campylobacter coli


organism_name: Vibrio parahaemolyticus


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Alachua


asm_submitter: DGA CBRN Defence Center

organism_name: Bacillus cereus


asm_submitter: University of Karachi

excluded_from_refseq: many frameshifted proteins

organism_name: Pseudocitrobacter faecalis


asm_submitter: Roskilde University

infraspecific_name: strain=C 237-04

organism_name: Escherichia coli O2:K2:H1


infraspecific_name: strain=C 236-04A

organism_name: Escherichia coli O125ac:K+:H10


infraspecific_name: strain=C 691-04A

organism_name: Escherichia coli O6:K2:H1


asm_submitter: Sir Run Run Shaw Hospital, Zhejiang University School of Medicine


organism_name: Salmonella enterica


asm_submitter: Guangdong Provincial Key Laboratory of Nutraceuticals and Functional Foods

organism_name: Lacticaseibacillus paracasei subsp. tolerans


asm_submitter: Zhejiang University

organism_name: Pectobacterium cacticida


asm_submitter: Princeton University

organism_name: Clostridium perfringens


asm_submitter: Shenzhen Seventh People's Hospital

infraspecific_name: strain=sunkii

organism_name: Lactobacillus delbrueckii


asm_submitter: Beijing Institute of Microbiology and Epidemiology

organism_name: Klebsiella pneumoniae


asm_submitter: Binzhou University


asm_submitter: Faculty of Public Health

organism_name: Streptococcus suis


asm_submitter: Zhejiang Provincial People's Hospital


asm_submitter: Dongguan Tungwah Hospital


asm_submitter: Jiangsu University

organism_name: Halocatena marina


asm_submitter: Jeju National University

organism_name: Flavobacterium sp. N1718


organism_name: Flavobacterium sp. N1719


organism_name: Flavobacterium sp. N1736


organism_name: Flavobacterium sp. N1846


organism_name: Flavobacterium sp. N1861


organism_name: Flavobacterium sp. N1946


organism_name: Flavobacterium sp. N1994


organism_name: Flavobacterium sp. N2013


organism_name: Flavobacterium sp. N2038


organism_name: Flavobacterium sp. N2155


organism_name: Flavobacterium sp. N2270


organism_name: Flavobacterium sp. N2469


organism_name: Flavobacterium sp. N2550


organism_name: Flavobacterium sp. N2820


organism_name: Flavobacterium sp. N3904


organism_name: Flavobacterium sp. N501239


organism_name: Flavobacterium sp. N502536


organism_name: Flavobacterium sp. N502540


organism_name: Flavobacterium sp. N503310


asm_submitter: INIA

organism_name: Erwinia sp. INIA01


asm_submitter: guangxi minzu university

infraspecific_name: strain=Bt Gxmzu777-1

organism_name: Bacillus thuringiensis


asm_submitter: University College Cork

organism_name: Streptococcus thermophilus


asm_submitter: National Center for Biotechnology Information

organism_name: Enterococcus faecium


asm_submitter: Kyonggi University

organism_name: Chryseobacterium viscerum


asm_submitter: university mohamed V

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Bacillus anthracis


asm_submitter: Chung-Ang university

organism_name: Pararhodobacter zhoushanensis


asm_submitter: Laboratorio de Microbiologia

organism_name: Vibrio chagasii


asm_submitter: Pondicherry university

organism_name: Bhargavaea beijingensis


organism_name: Pseudomonas sp. MDMC_285


asm_submitter: Shanghai Municipal Center for Diseases Control and Prevention

organism_name: Escherichia coli


asm_submitter: Beijing Forestry University

infraspecific_name: strain=MCCC 1K03193

organism_name: Neoluteolibacter flavescens


organism_name: Neoluteolibacter rhizosphaerae


asm_submitter: Laboratoire de sante publique du Quebec

organism_name: Klebsiella oxytoca


infraspecific_name: strain=CCTCC AB 2014275

organism_name: Neoluteolibacter arcticus


asm_submitter: Anses

organism_name: Campylobacter coli


asm_submitter: Microbial Institute for Fermentation Industry

organism_name: Lactiplantibacillus paraplantarum


asm_submitter: Instituto Oswaldo Cruz

organism_name: Acinetobacter baumannii


asm_submitter: CSIR-Institute of Microbial Technology

organism_name: Stagnihabitans lacustris


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Enterococcus faecium


asm_submitter: FDA


asm_submitter: CDC

organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Shigella flexneri


organism_name: Shigella sonnei


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Brandenburg


asm_submitter: Health Protection Agency

organism_name: Escherichia coli


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Salmonella enterica subsp. enterica serovar Montevideo


asm_submitter: Harbin Medical University

organism_name: Streptomyces sp. BI87


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Gaminara


asm_submitter: University of Siena

organism_name: Enterococcus faecalis


organism_name: Staphylococcus pseudintermedius


excluded_from_refseq: annotation fails completeness check


organism_name: Salmonella enterica subsp. enterica serovar Chandans


organism_name: Vibrio cholerae


organism_name: Vibrio parahaemolyticus


asm_submitter: National Center for Biotechnology Information

organism_name: Enterococcus faecium


asm_submitter: JSS College of Pharmacy, JSS Academy of Higher Education and Research

organism_name: Serratia marcescens


asm_submitter: Faculty of Veterinary Medicine, Ankara University (FVMAU)


asm_submitter: Yangzhou University

organism_name: Klebsiella michiganensis


asm_submitter: Academia Sinica

organism_name: Sphingomonas sp. R1


asm_submitter: shandong agricultural university

organism_name: Bacillus thuringiensis


organism_name: Arthrobacter sp. YA7-1


asm_submitter: Shenzhen Seventh People's Hospital

organism_name: Lactobacillus delbrueckii subsp. indicus


asm_submitter: Zhejiang Academy of Agricultural Sciences

infraspecific_name: strain=SMD-FA

organism_name: Alcaligenes sp. SMD-FA


asm_submitter: World Institute of Kimchi

organism_name: Weissella confusa


asm_submitter: CAU

organism_name: Bradyrhizobium sp.


organism_name: Hyphomicrobium sp.


asm_submitter: The University of Texas at Austin

organism_name: Candidatus Heimdallarchaeota archaeon


asm_submitter: Universidad EAFIT

organism_name: Bacillus cereus


asm_submitter: Inner Mongolia Agricultural University

organism_name: Peribacillus frigoritolerans


annotation_name: Annotation submitted by DOE Joint Genome Institute

annotation_provider: DOE Joint Genome Institute

asm_submitter: DOE Joint Genome Institute

infraspecific_name: strain=VKM Ac-2550

organism_name: Crystallibacter permensis


infraspecific_name: strain=CGMCC 1.12512

organism_name: Microbacterium hydrothermale


infraspecific_name: strain=USDA 92

organism_name: Bradyrhizobium diazoefficiens


infraspecific_name: strain=DSM 46137

organism_name: Actinoplanes cyaneus


infraspecific_name: strain=USDA 84a

organism_name: Bradyrhizobium elkanii


organism_name: Kerstersia gyiorum


organism_name: Flavobacterium psychraerolatum


infraspecific_name: strain=USDA 93


infraspecific_name: strain=USDA 101


infraspecific_name: strain=USDA 116


infraspecific_name: strain=USDA 103


infraspecific_name: strain=USDA 114

organism_name: Bradyrhizobium japonicum


infraspecific_name: strain=USDA 106

organism_name: Bradyrhizobium ottawaense


infraspecific_name: strain=USDA 117


infraspecific_name: strain=USDA 120


infraspecific_name: strain=USDA 100


organism_name: Rahnella aquatilis


organism_name: Azospirillum fermentarium


organism_name: Azospirillum canadense


organism_name: Acinetobacter sp. BIGb0204


organism_name: Providencia alcalifaciens


organism_name: Pseudomonas sp. JUb96


organism_name: Lactococcus lactis


organism_name: Sphingobacterium kitahiroshimense


organism_name: Gluconobacter cerinus


organism_name: Leucobacter luti


organism_name: Pseudomonas sp. BIGb0408


organism_name: Rhodococcus erythropolis


organism_name: Rhodoblastus acidophilus


organism_name: Enterobacter sp. JUb101


infraspecific_name: strain=DSM 17935

organism_name: Rhodobium gokarnense


infraspecific_name: strain=NP

organism_name: Rhodovulum sulfidophilum


infraspecific_name: strain=MTM

organism_name: Heliophilum fasciatum


organism_name: Rhodoferax antarcticus


infraspecific_name: strain=USDA 105

organism_name: Bradyrhizobium japonicum


infraspecific_name: strain=MO


infraspecific_name: strain=FL


infraspecific_name: strain=USDA 115


infraspecific_name: strain=USDA 119

organism_name: Bradyrhizobium elkanii


infraspecific_name: strain=USDA 99b


organism_name: Sphingobium sp. B11D3A


organism_name: Sphingobium sp. B10D3B


organism_name: Sphingobium sp. B11D3B


organism_name: Sphingobium sp. B11D3D


organism_name: Sphingobium sp. B12D2B


organism_name: Sphingobium sp. B2D3A


organism_name: Sphingobium sp. B2D3B


organism_name: Sphingobium sp. B2D3C


organism_name: Sphingobium sp. B2D3D


organism_name: Sphingobium sp. B8D3B


organism_name: Sphingobium sp. B7D2B


organism_name: Sphingobium sp. B8D3D


organism_name: Sphingobium xanthum


organism_name: Sphingobium sp. B10D7B


organism_name: Sphingobium sp. B1D7B


organism_name: Sphingobium sp. B8D3A


organism_name: Sphingobium sp. B8D3C


organism_name: Rhodococcus erythropolis


organism_name: Kerstersia gyiorum


organism_name: Pantoea agglomerans


infraspecific_name: strain=CFBP 7911

organism_name: Xanthomonas campestris


organism_name: Citrobacter farmeri


infraspecific_name: strain=CFBP 7924


infraspecific_name: strain=CFBP 13567


infraspecific_name: strain=CFBP 13568


infraspecific_name: strain=USDA 36

organism_name: Bradyrhizobium diazoefficiens


organism_name: Sphingomonas sp. R1F5B


infraspecific_name: strain=USDA 44


infraspecific_name: strain=USDA 52

organism_name: Bradyrhizobium ottawaense


infraspecific_name: strain=USDA 53


infraspecific_name: strain=USDA 51


infraspecific_name: strain=USDA 54


infraspecific_name: strain=USDA 55


organism_name: Stenotrophomonas maltophilia


organism_name: Pseudomonas psychrophila


infraspecific_name: strain=USDA 64


infraspecific_name: strain=USDA 62


organism_name: Enterobacter sp. BIGb0239


infraspecific_name: strain=USDA 96


organism_name: Rahnella aquatilis


infraspecific_name: strain=USDA 91


asm_submitter: Chinese Academy of Sciences

organism_name: Clostridium beijerinckii


organism_name: Elizabethkingia anophelis


asm_submitter: The New Zealand Institute for Plant and Food Research Ltd.

organism_name: Candidatus Symbiopectobacterium sp. NZEC151


organism_name: Candidatus Symbiopectobacterium sp. NZEC127


organism_name: Candidatus Symbiopectobacterium sp. NZEC135


asm_submitter: California Institute of Technology

excluded_from_refseq: derived from metagenome

organism_name: Candidatus Methanospirare jalkutatii


asm_submitter: University College Cork

organism_name: Streptococcus thermophilus


asm_submitter: NIBGE

organism_name: Bifidobacterium animalis


organism_name: Enterococcus faecium


organism_name: Limosilactobacillus reuteri


organism_name: Lacticaseibacillus paracasei


organism_name: Lacticaseibacillus rhamnosus


organism_name: Clostridium butyricum


organism_name: Lactobacillus delbrueckii


organism_name: Lactobacillus acidophilus


annotation_name: Annotation submitted by Colorado State University

annotation_provider: Colorado State University

asm_submitter: Colorado State University

organism_name: Frankiales bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Mycobacterium sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Actinomycetes bacterium


organism_name: Jatrophihabitans sp.


organism_name: Modestobacter sp.


organism_name: Blastococcus sp.


organism_name: Pseudonocardiales bacterium


organism_name: Flavipsychrobacter sp.


organism_name: Bacteroidota bacterium


organism_name: Segetibacter sp.


organism_name: Sediminibacterium sp.


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Escherichia coli


organism_name: Chitinophagaceae bacterium


organism_name: Ferruginibacter sp.


organism_name: Flaviaestuariibacter sp.


organism_name: Chthonomonadaceae bacterium


organism_name: Capsulimonas sp.


organism_name: Chthonomonadales bacterium


organism_name: Actinomycetota bacterium


organism_name: Solirubrobacterales bacterium


organism_name: Conexibacter sp.


organism_name: Solirubrobacteraceae bacterium


organism_name: Actinomycetes bacterium


organism_name: Thermoleophilia bacterium


organism_name: Actinoallomurus sp.


organism_name: Sphaerisporangium sp.


organism_name: Streptosporangiaceae bacterium


organism_name: Marmoricola sp.


organism_name: Nocardioides sp.


organism_name: Actinacidiphila oryziradicis


organism_name: Aeromicrobium sp.


organism_name: Friedmanniella sp.


organism_name: Propionibacteriaceae bacterium


organism_name: Nocardioidaceae bacterium


organism_name: Frankiales bacterium


organism_name: Mycobacterium sp.


organism_name: Blastococcus sp.


organism_name: Pseudonocardia sp.


organism_name: Modestobacter sp.


organism_name: Pseudonocardiales bacterium


organism_name: Dactylosporangium sp.


organism_name: Jatrophihabitans sp.


organism_name: Cryptosporangiaceae bacterium


organism_name: Klenkia sp.


organism_name: Thermoleophilia bacterium


organism_name: Thermomicrobiaceae bacterium


organism_name: Chloroflexota bacterium


organism_name: Pseudonocardiaceae bacterium


organism_name: Anaerolineales bacterium


organism_name: Nocardioides sp.


organism_name: Candidatus Methanophagales archaeon


organism_name: Candidatus Methanospirare jalkutatii


organism_name: Candidatus Methanoxibalbensis ujae


asm_submitter: University Potsdam, Hasso Plattner Institute

organism_name: Enterobacter hormaechei


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


asm_submitter: Lund University

organism_name: Stutzerimonas sp. S1


organism_name: Achromobacter spanius


asm_submitter: CDC

organism_name: Salmonella enterica


asm_submitter: National Center for Biotechnology Information

organism_name: Klebsiella aerogenes


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Escherichia coli


organism_name: Serratia marcescens


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Rissen


organism_name: Salmonella enterica subsp. enterica serovar London


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Enterococcus faecium


organism_name: Enterococcus faecalis


organism_name: Morganella morganii


organism_name: Salmonella enterica


organism_name: Proteus mirabilis


organism_name: Citrobacter freundii


organism_name: Escherichia coli


organism_name: Shigella boydii


asm_submitter: Instituto Oswaldo Cruz

organism_name: Acinetobacter baumannii


asm_submitter: Nanshan Center for Disease Control and Prevention, Shenzhen, China

organism_name: Campylobacter upsaliensis


asm_submitter: Tamil Nadu Agricultural Univarsity

organism_name: Cytobacillus firmus


asm_submitter: National Taiwan University

organism_name: Chryseobacterium oryctis


organism_name: Chryseobacterium kimseyorum


asm_submitter: Shanxi Agricultural University

organism_name: Shewanella subflava


organism_name: Citrobacter werkmanii


asm_submitter: Zunyi Medical University

organism_name: Micropruina sonneratiae


organism_name: Shigella flexneri


organism_name: Enterococcus faecium


organism_name: Enterococcus faecalis


organism_name: Morganella morganii


organism_name: Salmonella enterica


organism_name: Pseudomonas aeruginosa


organism_name: Citrobacter freundii


organism_name: Proteus mirabilis


organism_name: Salmonella enterica subsp. enterica serovar Ohio


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Thompson


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


asm_submitter: Public Health England


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


asm_submitter: Health Protection Agency

organism_name: Shigella flexneri


organism_name: Escherichia albertii


organism_name: Escherichia coli


organism_name: Shigella sonnei


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar London


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Muenster


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Shigella sonnei


organism_name: Salmonella enterica


organism_name: Pseudomonas aeruginosa


asm_submitter: CAU

organism_name: Burkholderiales bacterium


organism_name: Nitrosarchaeum sp.


organism_name: Enterococcus faecalis


organism_name: Citrobacter freundii


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Citrobacter koseri


organism_name: Morganella morganii


organism_name: Kluyvera ascorbata


organism_name: Citrobacter werkmanii


organism_name: Proteus mirabilis


asm_submitter: Yunnan University

infraspecific_name: strain=YIM 151858-1

organism_name: Hymenobacter latericius


organism_name: Providencia rettgeri


organism_name: Enterococcus faecium


infraspecific_name: strain=YIM 151500-1

organism_name: Hymenobacter weizhouensis


asm_submitter: Nanjing Agricultural University

organism_name: Streptococcus suis


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica


organism_name: Nitrosotalea sp.


organism_name: Frankiales bacterium


organism_name: Sphingomonas sp.


asm_submitter: Chongqing Medical University

organism_name: Arenimonas sp. GDDSR-1


organism_name: Chloroflexota bacterium


organism_name: Bacteroidia bacterium


organism_name: Gemmatimonadaceae bacterium


organism_name: Bryobacteraceae bacterium


organism_name: Nocardioidaceae bacterium


organism_name: bacterium


organism_name: Morganella morganii


organism_name: Enterococcus faecium


organism_name: Chthoniobacterales bacterium


organism_name: Pseudolabrys sp.


organism_name: Terriglobales bacterium


organism_name: Frankiaceae bacterium


organism_name: Burkholderiales bacterium


organism_name: Shigella flexneri


asm_submitter: USDA/ARS

organism_name: Moraxella bovis


asm_submitter: Public Health Agency of Sweden

organism_name: Escherichia coli


asm_submitter: University of Bern

organism_name: Entomomonas sp. E2T0


asm_submitter: Universite Claude Bernard Lyon 1

organism_name: Pseudomonas aeruginosa


organism_name: Pseudomonas syringae


organism_name: Pseudomonas putida


organism_name: Pseudomonas viridiflava


asm_submitter: IRHS

organism_name: Xanthomonas citri pv. fuscans


infraspecific_name: strain=LNPV 30.30


organism_name: Xanthomonas phaseoli pv. phaseoli


infraspecific_name: strain=CFBP 6533


infraspecific_name: strain=CFBP 7423


asm_submitter: shihezi university

organism_name: Erwinia amylovora


asm_submitter: University Hospital Regensburg

organism_name: Morganella morganii


organism_name: Proteus mirabilis


asm_submitter: CDC

organism_name: Salmonella enterica


asm_submitter: Anses


asm_submitter: Kyonggi University

organism_name: Chitinophaga nivalis


asm_submitter: Research Center of Biotechnology RAS

organism_name: Dethiobacter alkaliphilus


organism_name: Microbacterium sp. SSM24


organism_name: Limobrevibacterium gyesilva


excluded_from_refseq: genus undefined

organism_name: Neisseriaceae bacterium JH1-16


asm_submitter: University of Mosul

organism_name: Rhodococcus pyridinivorans


annotation_name: Annotation submitted by Department of Microbiology, Juntendo University School of Medicine

organism_name: Clostridium perfringens


asm_submitter: IHU mediterranee infection

organism_name: Coxiella burnetii


infraspecific_name: strain=PokerCat


infraspecific_name: strain=IXO


asm_submitter: National Center for Biotechnology Information

organism_name: Enterobacter hormaechei subsp. xiangfangensis


organism_name: Enterobacter kobei


organism_name: Enterobacter hormaechei subsp. steigerwaltii


organism_name: Enterobacter asburiae


organism_name: Escherichia coli


organism_name: Vibrio parahaemolyticus


asm_submitter: FDA


asm_submitter: Public Health Agency of Canada

organism_name: Salmonella enterica subsp. enterica serovar 47:z4,z23:-


organism_name: Vibrio cholerae


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: Yonsei University

organism_name: Bacilli bacterium


organism_name: Clostridiaceae bacterium


organism_name: Methanobrevibacter smithii


organism_name: Sutterellaceae bacterium


organism_name: Collinsella intestinalis


organism_name: Bifidobacteriaceae bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Eggerthellaceae bacterium


organism_name: Clostridiales bacterium


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Ruminococcus bromii


organism_name: Coriobacteriaceae bacterium


organism_name: Bifidobacterium adolescentis


excluded_from_refseq: contaminated; annotation fails MAG completeness check; derived from metagenome; many frameshifted proteins


organism_name: Veillonellaceae bacterium


organism_name: Collinsella aerofaciens


organism_name: Succinivibrionaceae bacterium


organism_name: Rikenellaceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Phascolarctobacterium faecium


organism_name: Coprobacillaceae bacterium


organism_name: Akkermansia muciniphila


organism_name: Adlercreutzia equolifaciens


organism_name: Faecalibacterium prausnitzii


organism_name: Akkermansiaceae bacterium


organism_name: Anaerobutyricum hallii


organism_name: Eggerthellaceae bacterium


organism_name: Prevotellaceae bacterium


organism_name: Clostridiales bacterium


organism_name: Bacteroidaceae bacterium


organism_name: Fusicatenibacter saccharivorans


asm_submitter: Beijing University of Chemical Technology

excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Candidatus Sumerlaeota bacterium


organism_name: Bacteroides mediterraneensis


organism_name: bacterium


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Thermomonas sp.


organism_name: Patescibacteria group bacterium


organism_name: Candidatus Microgenomates bacterium


organism_name: Planctomycetota bacterium


organism_name: Candidatus Dojkabacteria bacterium


organism_name: Anaerolineae bacterium


organism_name: Anaerolineales bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Ignavibacterium sp.


organism_name: Cyclobacteriaceae bacterium


organism_name: Chitinophagaceae bacterium


organism_name: Vicinamibacteria bacterium


organism_name: Candidatus Kuenenia sp.


organism_name: Fimbriimonadaceae bacterium


organism_name: Fimbriimonadales bacterium


annotation_name: Annotation submitted by Tokyo University of Agriculture

annotation_provider: Tokyo University of Agriculture

asm_submitter: Tokyo University of Agriculture

infraspecific_name: strain=NBRC 102526

organism_name: Asaia lannensis NBRC 102526


infraspecific_name: strain=NRIC 0323

organism_name: Asaia siamensis NRIC 0323


infraspecific_name: strain=NBRC 105894

organism_name: Asaia spathodeae NBRC 105894


infraspecific_name: strain=NRIC 0488

organism_name: Kozakia baliensis NRIC 0488


infraspecific_name: strain=NBRC 101099

organism_name: Neoasaia chiangmaiensis NBRC 101099


excluded_from_refseq: unverified source organism; not used as type

infraspecific_name: strain=NBRC 106556

organism_name: Neokomagataea tanensis NBRC 106556


infraspecific_name: strain=NBRC 106555

organism_name: Neokomagataea thailandica NBRC 106555


infraspecific_name: strain=DSM 15669

organism_name: Saccharibacter floricola DSM 15669


infraspecific_name: strain=LMG 21291

organism_name: Swaminathania salitolerans LMG 21291


infraspecific_name: strain=NBRC 103193

organism_name: Tanticharoenia sakaeratensis NBRC 103193


infraspecific_name: strain=DSM 13594

organism_name: Gluconacetobacter azotocaptans DSM 13594


infraspecific_name: strain=LMG 18890

organism_name: Komagataeibacter europaeus LMG 18890


infraspecific_name: strain=NRIC 0243

organism_name: Novacetimonas hansenii NRIC 0243


infraspecific_name: strain=NRIC 0521

organism_name: Komagataeibacter intermedius NRIC 0521


infraspecific_name: strain=DSM 13595

organism_name: Gluconacetobacter johannae DSM 13595


excluded_from_refseq: fragmented assembly

infraspecific_name: strain=NRIC 0522

organism_name: Gluconacetobacter liquefaciens NRIC 0522


infraspecific_name: strain=NRIC 0616

organism_name: Komagataeibacter nataicola NRIC 0616


excluded_from_refseq: fragmented assembly; not used as type

infraspecific_name: strain=DSM 11826

organism_name: Komagataeibacter oboediens DSM 11826


infraspecific_name: strain=DSM 16663

organism_name: Komagataeibacter rhaeticus DSM 16663


infraspecific_name: strain=DSM 12717

organism_name: Gluconacetobacter sacchari DSM 12717


infraspecific_name: strain=NRIC 0614

organism_name: Komagataeibacter saccharivorans NRIC 0614


infraspecific_name: strain=DSM 15973

organism_name: Komagataeibacter sucrofermentans DSM 15973


infraspecific_name: strain=DSM 16373

organism_name: Komagataeibacter swingsii DSM 16373


infraspecific_name: strain=NBRC 15237

organism_name: Komagataeibacter xylinus NBRC 15237


infraspecific_name: strain=NBRC 3250

organism_name: Gluconobacter albidus NBRC 3250


infraspecific_name: strain=NRIC 0229

organism_name: Gluconobacter cerinus NRIC 0229


annotation_name: Annotation submitted by Hiroshima University

annotation_provider: Hiroshima University

asm_submitter: Hiroshima University

organism_name: Vibrio alginolyticus


asm_submitter: Montana State University

organism_name: Candidatus Acetothermia bacterium


infraspecific_name: strain=NRIC 0228

organism_name: Gluconobacter frateurii NRIC 0228


asm_submitter: Stanford University

organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Vibrio vulnificus


infraspecific_name: strain=NBRC 3271

organism_name: Gluconobacter japonicus NBRC 3271


infraspecific_name: strain=NBRC 3266

organism_name: Gluconobacter kondonii NBRC 3266


annotation_name: Annotation submitted by NCGM

annotation_provider: NCGM

asm_submitter: NCGM

infraspecific_name: strain=ATCC 19606

organism_name: Acinetobacter baumannii


infraspecific_name: strain=NBRC 3990

organism_name: Gluconobacter roseus NBRC 3990


infraspecific_name: strain=NBRC 12467

organism_name: Gluconobacter sphaericus NBRC 12467


infraspecific_name: strain=NBRC 100600

organism_name: Gluconobacter thailandicus F149-1 = NBRC 100600


infraspecific_name: strain=NBRC 103581

organism_name: Gluconobacter wancherniae NBRC 103581


infraspecific_name: strain=NRIC 0535

organism_name: Asaia krungthepensis NRIC 0535


annotation_name: Annotation submitted by Kyushu University Graduate school of medical sciences, department of Bacteriology

organism_name: Escherichia coli


infraspecific_name: strain=NRIC 0311

organism_name: Asaia bogorensis NBRC 16594


infraspecific_name: strain=NBRC 103196

organism_name: Ameyamaea chiangmaiensis NBRC 103196


annotation_provider: Kyushu University Graduate school of medical sciences, department of Bacteriology


infraspecific_name: strain=NRIC 0498

organism_name: Acidomonas methanolica


infraspecific_name: strain=DSM 11237

organism_name: Acidocella aminolytica 101 = DSM 11237


asm_submitter: Kyushu University Graduate school of medical sciences, department of Bacteriology


infraspecific_name: strain=DSM 700

organism_name: Acidiphilium acidophilum DSM 700


infraspecific_name: strain=NRIC 0312

organism_name: Acetobacter tropicalis NRIC 0312


infraspecific_name: strain=NRIC 0483

organism_name: Acetobacter syzygii NRIC 0483


excluded_from_refseq: genome length too small; not used as type

infraspecific_name: strain=DSM 18889

organism_name: Acetobacter senegalensis DSM 18889


infraspecific_name: strain=DSM 11825

organism_name: Acetobacter pomorum DSM 11825


infraspecific_name: strain=NRIC 0475

organism_name: Acetobacter peroxydans


infraspecific_name: strain=NBRC 13755

organism_name: Acetobacter peroxydans NBRC 13755


infraspecific_name: strain=NRIC 0473

organism_name: Acetobacter orleanensis NRIC 0473


infraspecific_name: strain=NRIC 0481

organism_name: Acetobacter orientalis NRIC 0481


infraspecific_name: strain=LMG 21952

organism_name: Acetobacter oeni LMG 21952


infraspecific_name: strain=LMG 23498

organism_name: Acetobacter nitrogenifigens DSM 23921 = NBRC 105050


infraspecific_name: strain=DSM 14337

organism_name: Acetobacter malorum DSM 14337


infraspecific_name: strain=NRIC 0474

organism_name: Acetobacter lovaniensis NRIC 0474


infraspecific_name: strain=NRIC 0313

organism_name: Acetobacter indonesiensis NRIC 0313


infraspecific_name: strain=DSM 18895

organism_name: Acetobacter ghanensis DSM 18895


asm_submitter: CSIR-Institute of Microbial Technology

organism_name: Burkholderia cenocepacia


infraspecific_name: strain=DSM 19596

organism_name: Acetobacter fabarum DSM 19596


organism_name: Escherichia coli


infraspecific_name: strain=NRIC 0472

organism_name: Acetobacter estunensis NRIC 0472


infraspecific_name: strain=NRIC 0482

organism_name: Acetobacter cibinongensis NRIC 0482


infraspecific_name: strain=DSM 14362

organism_name: Acetobacter cerevisiae DSM 14362


infraspecific_name: strain=NBRC 103587

organism_name: Gluconobacter kanchanaburiensis NBRC 103587


annotation_name: Annotation submitted by Osaka University

annotation_provider: Osaka University

asm_submitter: Osaka University

infraspecific_name: strain=NT-I

organism_name: Stutzerimonas stutzeri


excluded_from_refseq: contaminated; genome length too large


asm_submitter: Laboratory of Microbiology, Division of Marine Life Science, Faculty of Fisheries Sciences, Hokkaido University

infraspecific_name: strain=CECT 5085

organism_name: Vibrio agarivorans


annotation_name: Annotation submitted by Kitasato Institute for Life Sciences, Kitasato University

organism_name: Rhizohabitans arisaemae


annotation_name: Annotation submitted by Shandong University, lushanWang

annotation_provider: Shandong University, lushanWang

asm_submitter: Shandong University, lushanWang

organism_name: Bacillus sp. CN2


annotation_name: Annotation submitted by Microbe Division (RIKEN BRC JCM), RIKEN BioResource Center

organism_name: Actinomycetota bacterium


annotation_provider: Microbe Division (RIKEN BRC JCM), RIKEN BioResource Center

organism_name: Alphaproteobacteria bacterium


asm_submitter: Microbe Division (RIKEN BRC JCM), RIKEN BioResource Center


organism_name: Bacteroidia bacterium


annotation_name: Annotation submitted by Toho University

annotation_provider: Toho University

asm_submitter: Toho University

excluded_from_refseq: from large multi-isolate project


organism_name: Betaproteobacteria bacterium


organism_name: candidate division SR1 bacterium


organism_name: Clostridia bacterium


organism_name: Deferribacterales bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Campylobacterota bacterium


organism_name: Fibrobacterales bacterium


organism_name: Planctomycetales bacterium


organism_name: Spirochaetia bacterium


organism_name: Klebsiella pneumoniae subsp. pneumoniae


annotation_name: Annotation submitted by Ion Beam Mutagenesis Takasaki Advanced Radiation Research Institute Quantum Beam Science Research Directorate, National Institutes for Quantum Science and Technology

organism_name: Deinococcus aetherius


annotation_name: Annotation submitted by Laboratory for Microbiome Sciences, Center for Integrative Medical Sciences, RIKEN

organism_name: Aquiluna sp. KACHI24


organism_name: Synergistales bacterium


organism_name: Endomicrobiia bacterium


annotation_provider: Laboratory for Microbiome Sciences, Center for Integrative Medical Sciences, RIKEN

organism_name: Sediminibacterium planctonicum


annotation_name: Annotation submitted by National Institute of Infectious Diseases

organism_name: Helicobacter heilmannii


annotation_provider: National Institute of Infectious Diseases

excluded_from_refseq: many frameshifted proteins

organism_name: Helicobacter ailurogastricus


annotation_name: Annotation submitted by Environmental Microbiology Lab, Department of Chemistry and Life Science, College of Bioresource Sciences, Nihon University

organism_name: Nitrosopumilus zosterae


annotation_name: Annotation submitted by AMR Research Center, National Institute of Infectious Diseases

organism_name: Proteus mirabilis


annotation_provider: AMR Research Center, National Institute of Infectious Diseases

organism_name: Shewanella xiamenensis


asm_submitter: AMR Research Center, National Institute of Infectious Diseases

organism_name: Enterococcus faecium


annotation_name: Annotation submitted by Oita University

annotation_provider: Oita University

asm_submitter: Oita University

organism_name: Helicobacter pylori


organism_name: Actinomycetota bacterium


excluded_from_refseq: contaminated; genus undefined


annotation_name: Annotation submitted by Kyoto University

annotation_provider: Kyoto University

asm_submitter: Kyoto University

organism_name: Desulfolithobacter dissulfuricans


organism_name: Alphaproteobacteria bacterium


annotation_name: Annotation submitted by RIKEN-BRC

annotation_provider: RIKEN-BRC

asm_submitter: RIKEN-BRC

organism_name: Thermoanaerobaculum sp.


organism_name: Fimbriimonadales bacterium


organism_name: Armatimonadota bacterium


organism_name: Bacilli bacterium


excluded_from_refseq: derived from metagenome

organism_name: Ignavibacterium sp.


organism_name: Bacteroidota bacterium


organism_name: Candidatus Roseilinea sp.


excluded_from_refseq: derived from metagenome; many frameshifted proteins

organism_name: Fischerella sp.


organism_name: Bacteroidia bacterium


organism_name: Thermosynechococcus sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Candidatus Dojkabacteria bacterium


organism_name: Patescibacteria group bacterium


organism_name: Candidatus Parcubacteria bacterium


organism_name: Geminicoccaceae bacterium


organism_name: Escherichia coli


organism_name: Citrobacter freundii


organism_name: Salmonella enterica


annotation_name: Annotation submitted by Life Science Reseach Center, College of Bioresource Sciences, Nihon University

infraspecific_name: strain=JCM 16183

organism_name: Caldinitratiruptor microaerophilus


annotation_name: Annotation submitted by Microbiology Allied Health Sciences, Kitasato university

organism_name: Enterobacter roggenkampii


annotation_provider: Microbiology Allied Health Sciences, Kitasato university

organism_name: Enterobacter asburiae


asm_submitter: Microbiology Allied Health Sciences, Kitasato university

organism_name: Aeromonas caviae


annotation_name: Annotation submitted by Laboratory of Fish Diseases, Faculty of Veterinary Medicine, Okayama University of Science

organism_name: Aureispira anguillae


asm_submitter: National Institute of Infectious Diseases

organism_name: Helicobacter suis HS1


annotation_name: Annotation submitted by Fukui Prefectural University

annotation_provider: Fukui Prefectural University

asm_submitter: Fukui Prefectural University

infraspecific_name: strain=JCM 14722

organism_name: Pseudodesulfovibrio portus


annotation_name: Annotation submitted by Department of Biological Sciences, Graduate School of Science, The University of Tokyo

organism_name: Vibrio sp. STUT-A11


excluded_from_refseq: genus undefined

organism_name: Bacteroidia bacterium


organism_name: Betaproteobacteria bacterium


annotation_provider: Department of Biological Sciences, Graduate School of Science, The University of Tokyo

organism_name: Vibrio sp. STUT-A16


asm_submitter: Laboratory for Microbiome Sciences, Center for Integrative Medical Sciences, RIKEN

organism_name: Rhodoluna sp. KAS3


organism_name: Rhodoluna lacicola


annotation_name: Annotation submitted by Laboratory of Gene Biodynamics, Graduate School of Biostudies, Kyoto University

organism_name: Limnospira platensis NIES-39


organism_name: Clostridia bacterium


annotation_name: Annotation submitted by RIKEN-BRC, JCM

annotation_provider: RIKEN-BRC, JCM

asm_submitter: RIKEN-BRC, JCM

infraspecific_name: strain=JCM 11219

organism_name: Vulcanisaeta souniana JCM 11219


annotation_name: Annotation submitted by Microbe Division (RIKEN BRC JCM), RIKEN BioResource Center


annotation_name: Annotation submitted by Antimicrobial Resistance Research Center, National Institute of Infectious Diseases

organism_name: Klebsiella pneumoniae


annotation_provider: Antimicrobial Resistance Research Center, National Institute of Infectious Diseases


organism_name: Escherichia coli


organism_name: Bordetella pertussis


annotation_name: Annotation submitted by Department of Bacteriology, Faculty of Medical Sciences, Kyushu University


excluded_from_refseq: fragmented assembly; genus undefined


annotation_provider: Department of Bacteriology, Faculty of Medical Sciences, Kyushu University


asm_submitter: Department of Bacteriology, Faculty of Medical Sciences, Kyushu University


organism_name: Deltaproteobacteria bacterium


organism_name: Campylobacterota bacterium


organism_name: Planctomycetales bacterium


annotation_name: Annotation submitted by Microbial Evolution and Function Researches, Graduate School of Life Sciences, Tohoku University

organism_name: Photobacterium damselae subsp. damselae


infraspecific_name: strain=DSM 104291

organism_name: Vibrio gangliei


organism_name: Spirochaetia bacterium


organism_name: Synergistales bacterium


organism_name: Candidatus Pacearchaeota archaeon


excluded_from_refseq: contaminated; derived from metagenome; genus undefined

organism_name: Candidatus Woesearchaeota archaeon


organism_name: Candidatus Nitrosocaldaceae archaeon


organism_name: Bryobacteraceae bacterium


organism_name: Pyrinomonadaceae bacterium


organism_name: Acidimicrobiales bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Gaiellaceae bacterium


organism_name: Actinomycetota bacterium


organism_name: Fimbriimonadales bacterium


organism_name: Armatimonadota bacterium


organism_name: Bacteroidia bacterium


organism_name: Saprospiraceae bacterium


organism_name: Chitinophagales bacterium


organism_name: Cyclobacteriaceae bacterium


organism_name: Thermonema sp.


organism_name: Vicingaceae bacterium


organism_name: Ignavibacterium sp.


organism_name: Kapaibacterium sp. (SeqCode)


organism_name: Rhodothermaceae bacterium


organism_name: Bellilinea sp.


organism_name: Caldilinea sp.


organism_name: Litorilinea sp.


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: FDA

organism_name: Campylobacter coli


organism_name: Anaerolineae bacterium


organism_name: Candidatus Roseilinea sp.


organism_name: Chloroflexus sp.


organism_name: Herpetosiphonaceae bacterium


organism_name: Roseiflexus sp.


organism_name: Thermomicrobiales bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Tepidiforma sp.


organism_name: Chloroflexota bacterium


organism_name: Candidatus Sericytochromatia bacterium


organism_name: Meiothermus sp.


organism_name: Binatia bacterium (SeqCode)


organism_name: Deltaproteobacteria bacterium


organism_name: Caloramator sp.


organism_name: Anoxybacillus sp.


organism_name: Gemmatimonadales bacterium


organism_name: Nitrospiraceae bacterium


organism_name: Candidatus Dojkabacteria bacterium


organism_name: Patescibacteria group bacterium


organism_name: Candidatus Parcubacteria bacterium


organism_name: Planctomycetota bacterium


organism_name: Phycisphaerales bacterium


organism_name: Phycisphaerae bacterium


organism_name: Gemmatales bacterium


organism_name: Gemmataceae bacterium


organism_name: Isosphaeraceae bacterium


organism_name: Pirellulaceae bacterium


organism_name: Thermogutta sp.


organism_name: Planctomycetaceae bacterium


organism_name: Candidatus Poribacteria bacterium


organism_name: Elioraea sp.


organism_name: Paracoccaceae bacterium


organism_name: Rhodothalassiaceae bacterium


organism_name: Erythrobacter sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Caldimonas sp.


organism_name: Burkholderiales bacterium


organism_name: Porticoccaceae bacterium


organism_name: Lysobacterales bacterium


organism_name: Lysobacteraceae bacterium


organism_name: Silanimonas sp.


organism_name: Leptospiraceae bacterium


organism_name: Candidatus Sumerlaea sp.


organism_name: Candidatus Tectimicrobiota bacterium


organism_name: Limisphaera sp.


annotation_name: Annotation submitted by National Institute of Infectious Diseases

organism_name: Capnocytophaga catalasegens


annotation_name: Annotation submitted by Tokyo University of Marine Science and Technology

organism_name: Mycolicibacterium cyprinidarum


annotation_provider: Tokyo University of Marine Science and Technology


asm_submitter: Tokyo University of Marine Science and Technology


annotation_name: Annotation submitted by Bacteriology, Nagoya University, Graduated School of Medicine

organism_name: Klebsiella pneumoniae


annotation_provider: Bacteriology, Nagoya University, Graduated School of Medicine


asm_submitter: Bacteriology, Nagoya University, Graduated School of Medicine


annotation_name: Annotation submitted by Dept. of Veterinary Science, National Institute of Infectious Diseases


annotation_provider: Dept. of Veterinary Science, National Institute of Infectious Diseases


annotation_name: Annotation submitted by Nagoya University

annotation_provider: Nagoya University

asm_submitter: Nagoya University


organism_name: Klebsiella variicola


organism_name: Klebsiella quasipneumoniae


organism_name: Klebsiella michiganensis


annotation_name: Annotation submitted by Department of Life Science and Technology, Tokyo Institute of Technology

organism_name: Streptomyces sp. A012304


asm_submitter: Deep seawater Laboratory, Kochi University

organism_name: Hoyosella levis


annotation_name: Annotation submitted by Green Polymer Science, Division of Molecular Science, Graduate School of Science and Technology, Gunma University

organism_name: Haladaptatus sp. T7


organism_name: Escherichia coli


organism_name: Providencia rettgeri


organism_name: Klebsiella quasipneumoniae subsp. similipneumoniae


organism_name: Citrobacter koseri


excluded_from_refseq: fragmented assembly; genome length too large


organism_name: Serratia marcescens


organism_name: Klebsiella pneumoniae subsp. pneumoniae


organism_name: Klebsiella pneumoniae subsp. ozaenae


organism_name: Providencia stuartii


organism_name: Morganella morganii


excluded_from_refseq: fragmented assembly; from large multi-isolate project; genome length too large


organism_name: Enterobacter roggenkampii


excluded_from_refseq: contaminated; fragmented assembly; from large multi-isolate project; genome length too large


organism_name: Enterobacter hormaechei subsp. steigerwaltii


excluded_from_refseq: fragmented assembly; from large multi-isolate project


organism_name: Proteus mirabilis


organism_name: Klebsiella variicola


organism_name: Enterobacter kobei


annotation_name: Annotation submitted by National Agricultural Research Centre (NARC), Islamabad

organism_name: Sporosarcina sp. NCCP-2378


annotation_provider: National Agricultural Research Centre (NARC), Islamabad

organism_name: Cytobacillus sp. NCCP-133


annotation_name: Annotation submitted by National Culture Collection of Pakistan (NCCP), Bioresources Conservation Institute (BCI),

organism_name: Dietzia sp. NCCP-2495


organism_name: Escherichia coli


annotation_name: Annotation submitted by Biological Resource Center, National Institute of Technology and Evaluation

infraspecific_name: strain=NBRC 112813

organism_name: Arthrobacter mangrovi


annotation_name: Annotation submitted by Department of Mycobacteriology, Leprosy Research Center, National Institute of Infectious Diseases - Japan

organism_name: Mycobacterium kiyosense


annotation_provider: Department of Mycobacteriology, Leprosy Research Center, National Institute of Infectious Diseases - Japan


asm_submitter: Department of Mycobacteriology, Leprosy Research Center, National Institute of Infectious Diseases - Japan


annotation_name: Annotation submitted by Section of Chemical Engineering, Department of Green Technology, University of Southern Denmark


annotation_name: Annotation submitted by Chemical Engineering, Department of Green Technology, University of Southern Denmark


annotation_provider: Section of Chemical Engineering, Department of Green Technology, University of Southern Denmark

organism_name: Streptococcus alactolyticus


annotation_name: Annotation submitted by Hirosaki University

annotation_provider: Hirosaki University

asm_submitter: Hirosaki University

organism_name: Clostridium omnivorum


asm_submitter: AMR Research Center, National Institute of Infectious Diseases


organism_name: Escherichia fergusonii


annotation_name: Annotation submitted by Bioproduction Research Institute

annotation_provider: Bioproduction Research Institute

asm_submitter: Bioproduction Research Institute

organism_name: Lysinibacillus piscis


annotation_name: Annotation submitted by AMR Research Center, National Institute of Infectious Diseases

organism_name: Shewanella xiamenensis


annotation_provider: AMR Research Center, National Institute of Infectious Diseases

organism_name: Enterococcus faecium


annotation_name: Annotation submitted by Laboratory of Aquatic Medicine School of Veterinary Medicine, Nippon Veterinary and Life Science University

infraspecific_name: strain=ATCC BAA-256

organism_name: Mycobacterium montefiorense


annotation_provider: Laboratory of Aquatic Medicine School of Veterinary Medicine, Nippon Veterinary and Life Science University

organism_name: Mycobacteroides chelonae


annotation_name: Annotation submitted by AMR research center, National Institute of Infectious Diseases

organism_name: Pseudomonas aeruginosa


annotation_provider: AMR research center, National Institute of Infectious Diseases


asm_submitter: AMR research center, National Institute of Infectious Diseases


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

asm_submitter: University of Liverpool

organism_name: Shigella sonnei


organism_name: Shigella flexneri


asm_submitter: Bose Institute

organism_name: Paenarthrobacter sp. PAE-2


organism_name: Shigella flexneri 5a str. M90T


asm_submitter: Kenya Agricultural and Livestock Research Organisation

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Enterococcus gallinarum


asm_submitter: SMCW, SUHRC and SSBS, Symbiosis International Deemed University

organism_name: Aeromonas caviae


asm_submitter: Southern University of Science and Technology

organism_name: Vibrio cholerae


asm_submitter: University of Sao Paulo

organism_name: Salmonella enterica subsp. enterica


asm_submitter: the First Affiliated Hospital of Wenzhou Medical University

organism_name: Klebsiella pneumoniae


asm_submitter: Fifth Affiliated Hospital, Southern Medical University

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


asm_submitter: Shanghai Municipal Center for Diseases Control and Prevention

organism_name: Escherichia coli


asm_submitter: University of Hyderabad

organism_name: Paenibacillus sp. LS1


organism_name: Escherichia albertii


asm_submitter: Jiangxi Normal University

organism_name: Sphingomonas caeni


asm_submitter: Chulalonkorn University

organism_name: Micromonospora sp. DR5-3


infraspecific_name: strain=DSM 45980

organism_name: Micromonospora yasonensis


asm_submitter: University of Agriculture in Krakow

organism_name: Leptospira interrogans


organism_name: Sphingomonas canadensis


asm_submitter: Chung-Ang University

infraspecific_name: strain=CAU 1641

organism_name: Defluviimonas salinarum


asm_submitter: Korea research institute of biotechnology bioscience

organism_name: Sphingomonas arvum


asm_submitter: Baskent University

organism_name: Levilactobacillus namurensis


asm_submitter: Shandong University

infraspecific_name: strain=AAT

organism_name: Plebeiibacterium sediminum


organism_name: Plebeiibacterium marinum


asm_submitter: World Institute of Kimchi

infraspecific_name: strain=DSM 25609

organism_name: Virgibacillus natechei


asm_submitter: Institute of Microbiology and Epizootics Freie Universitaet Berlin

organism_name: Gallibacterium anatis


asm_submitter: National Center of Infectious and Parasitic Diseases

infraspecific_name: strain=BCG delta BCG1419c mutant

organism_name: Mycobacterium tuberculosis variant bovis


asm_submitter: Korea Research Institute of Bioscience and Biotechnology

organism_name: Algoriphagus halophytocola


asm_submitter: AtoGen Co., Ltd.

organism_name: Lacticaseibacillus paracasei


asm_submitter: Sanigen

organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: Fujian Agriculture and Forestry University

organism_name: Lactiplantibacillus plantarum


asm_submitter: Korean Collection for Oral Microbiology

infraspecific_name: strain=KCOM 2191

organism_name: Capnocytophaga ochracea


infraspecific_name: strain=KCOM 26681


infraspecific_name: strain=KCOM 28121


infraspecific_name: strain=KCOM 20461

organism_name: Selenomonas sputigena


asm_submitter: Hebei Academy of Agricultural and Forestry Sciences

organism_name: Peribacillus frigoritolerans


organism_name: Bacillus halotolerans


asm_submitter: Brno University of Technology

infraspecific_name: strain=LMG 23380

organism_name: Caldimonas aquatica


asm_submitter: Jiangsu University

organism_name: Halocatena marina


annotation_name: Annotation submitted by Philipps University of Marburg

annotation_provider: Philipps University of Marburg

asm_submitter: Philipps-University Marburg

organism_name: Shewanella algae


asm_submitter: Bose Institute

organism_name: Brevibacterium sp. JSBI002


organism_name: Marinobacter sp. AN1


organism_name: Brucella sp. JSBI001


asm_submitter: Henan Academy of Agricultural Sciences

organism_name: Bacillus siamensis


asm_submitter: Universitaetsklinikum Erlangen

organism_name: Escherichia coli


organism_name: Pseudomonas aeruginosa


organism_name: Enterobacter hormaechei subsp. hoffmannii


asm_submitter: Shanghai Jiao Tong University

organism_name: Candidatus Bathyarchaeota archaeon


organism_name: Bathyarchaeum sp. (SeqCode)


isolate: SQ


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined


asm_submitter: Research Institute for Microbial Diseases, Osaka University

organism_name: Segatella copri


asm_submitter: Cross - sectoral framework for quality Assurance Resouces for countries in the European Union- CARE - National Veterinary Research

organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: Shan Dong University

organism_name: Halocynthiibacter sp. SDUM655004


asm_submitter: Osmangazi University

excluded_from_refseq: contaminated

organism_name: Halomonas sp. 18H


asm_submitter: University of Montana

isolate: Smith

organism_name: Wolbachia endosymbiont of Drosophila pseudotakahashii


asm_submitter: The First Affiliated Hospital, Zhejiang University School of Medicine

organism_name: Enterobacter hormaechei


infraspecific_name: strain=KCOM 1787

organism_name: Selenomonas sputigena


asm_submitter: All-Russia Research Institute for Agricultural Microbiology

organism_name: Rhodopseudomonas sp. P2A-2r


asm_submitter: Jinan University

organism_name: Klebsiella pneumoniae


asm_submitter: Hainan University

organism_name: Aeromonas veronii


asm_submitter: Yangzhou

organism_name: Proteus mirabilis


asm_submitter: Sciensano

excluded_from_refseq: RefSeq annotation failed

organism_name: Shigella sonnei


asm_submitter: Japan Agency for Marine-Earth Science and technology

organism_name: Methanosarcinales archaeon


organism_name: Candidatus Pacearchaeota archaeon


asm_submitter: Agriculture and Agri-food Canada

organism_name: Pseudomonas viciae


organism_name: Pseudomonas sp. B21-059


organism_name: Pseudomonas asplenii


organism_name: Pseudomonas sp. B21-056


organism_name: Pseudomonas sp. B21-054


organism_name: Pseudomonas sp. B21-053


asm_submitter: Nankai University

infraspecific_name: strain=FKU

organism_name: Bifidobacterium sp. FKU


infraspecific_name: strain=SKU

organism_name: Bifidobacterium sp. SKU


infraspecific_name: strain=TKU

organism_name: Bifidobacterium sp. TKU


infraspecific_name: strain=SOCE 004

organism_name: Cognatishimia activa


asm_submitter: Korea Research Institute of Bioscience and Biotechnology (KRIBB)

organism_name: Alkalimarinus alittae


organism_name: Pseudomonas corrugata


organism_name: Pseudomonas mediterranea


asm_submitter: Nutrition &Health Technology Center

infraspecific_name: strain=VHProbi P06

organism_name: Lactiplantibacillus plantarum


asm_submitter: Shanghai Veterinary Research Institute

organism_name: Riemerella anatipestifer


asm_submitter: Shanghai Public Health Clinical Center

excluded_from_refseq: annotation fails completeness check

organism_name: Pseudomonas aeruginosa


asm_submitter: China Agricultural University

organism_name: Escherichia coli


asm_submitter: Guangdong Academy of Agricultural Sciences

organism_name: Ralstonia pseudosolanacearum


asm_submitter: Guangdong Province Maternal and Child Health Hospital

organism_name: Klebsiella quasipneumoniae


asm_submitter: Chinese Academy of Agricultural Science

organism_name: Gordonia polyisoprenivorans


asm_submitter: The University of Melbourne

organism_name: Mycoplasmopsis synoviae


asm_submitter: Zhejiang Tianke High Technology Development Co.Ltd.

infraspecific_name: strain=ATCC 8739

organism_name: Escherichia coli ATCC 8739


asm_submitter: Faculty of Pharmacy - U. Porto


asm_submitter: National Center for Biotechnology Information

excluded_from_refseq: from large multi-isolate project

isolate: Patient 2

organism_name: Klebsiella oxytoca


organism_name: Legionella pneumophila


isolate: Patient 1

organism_name: Klebsiella pneumoniae


organism_name: Salmonella enterica


isolate: construct


asm_submitter: CDC


annotation_name: Annotation submitted by National Technical University of Athens

annotation_provider: National Technical University of Athens

asm_submitter: National Technical University of Athens (NTUA)

organism_name: Amycolatopsis mediterranei


asm_submitter: Health Protection Agency

organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Shigella boydii


asm_submitter: FDA


asm_submitter: Center for Food Safety and Applied Nutrition


infraspecific_name: strain=Legionella pneumophila subsp. fraseri

isolate: blood


organism_name: Shigella dysenteriae


asm_submitter: Institut Pasteur, Universite Paris Cite


asm_submitter: Novo Nordisk Foundation Center for Biosustainability

organism_name: Allobosea sp. NBC_00550


isolate: Stool culture


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


isolate: Blood culture


isolate: Fluid


organism_name: Escherichia coli


asm_submitter: CSIR-Institute of Microbial Technology

organism_name: Burkholderia cenocepacia


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


isolate: Urine culture


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Typhi


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Worthington


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Escherichia coli


organism_name: Listeria monocytogenes


asm_submitter: Yunnan University

infraspecific_name: strain=YIM 151337

organism_name: Hoyosella sp. YIM 151337


asm_submitter: University of California, Davis

organism_name: Candidatus Thiodiazotropha weberae


asm_submitter: National University of Sciences & Technology (NUST)

excluded_from_refseq: unverified source organism

organism_name: Klebsiella pneumoniae


excluded_from_refseq: derived from metagenome

organism_name: Candidatus Thiodiazotropha lotti


organism_name: Candidatus Thiodiazotropha endolucinida


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Candidatus Thiodiazotropha taylori


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


excluded_from_refseq: contaminated; derived from metagenome


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Manhattan


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Thompson


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Shigella flexneri


organism_name: Escherichia coli


organism_name: Shigella sonnei


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


organism_name: Pseudomonas aeruginosa


organism_name: Citrobacter amalonaticus


organism_name: Klebsiella pneumoniae


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Cerro


asm_submitter: Swedish Food Agency


asm_submitter: FDA Center for Food Safety and Applied Nutrition

isolate: Sub 1 of queso fresco

organism_name: Listeria innocua


isolate: Sub 12 of queso fresco


isolate: Sub 14 of queso fresco


isolate: Sub 13 of queso fresco


isolate: Sub 2 of queso fresco


isolate: Sub 11 of queso fresco


isolate: Sub 17 of queso fresco


isolate: Sub 15 of queso fresco


isolate: Sub 1 of queso fresco con hojo de platano


isolate: Sub 3 of queso fresco


isolate: Sub 3 of queso fresco con hojo de platano


isolate: Sub 5 of queso fresco


isolate: Sub 4 of queso fresco


isolate: Sub 8 of queso fresco


isolate: Sub 7 of queso fresco


isolate: Sub 9 of queso fresco


isolate: Sub 10 of queso fresco


asm_submitter: CDC


isolate: whole organism


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


isolate: Sub 1 of queso fresco Hondureno


isolate: Sub 6 of queso fresco


organism_name: Vibrio parahaemolyticus


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Acinetobacter baumannii


organism_name: Escherichia coli


organism_name: Pseudomonas aeruginosa


organism_name: Listeria monocytogenes


asm_submitter: National Center for Biotechnology Information


excluded_from_refseq: contaminated; from large multi-isolate project


asm_submitter: FDA


isolate: Sub 16 of queso fresco


isolate: Sub 2 of queso fresco Hondureno


organism_name: Shigella sonnei


organism_name: Shigella flexneri


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Alachua


organism_name: Enterococcus faecalis