asm_submitter: Missouri State Public Health Laboratory


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: National Center for Biotechnology Information

assembly_level: Contig

assembly_type: haploid

excluded_from_refseq: from large multi-isolate project

genome_rep: Full

group: bacteria

organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004120

release_type: Major

version_status: latest


asm_submitter: CDC

organism_name: Salmonella enterica


asm_submitter: Vermont Department of Health Laboratory

organism_name: Listeria innocua


organism_name: Salmonella enterica subsp. enterica serovar Typhi


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004196


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004194


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004193


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004192


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004163


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004157


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004161


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004155


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004153


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004150


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004149


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004147


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004145


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004144


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004143


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004140


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004139


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004137


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004068


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004131


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004136


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004069


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004037


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004036


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004029


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004035


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004023


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004028


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004026


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004022


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004020


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004019


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004018


organism_name: Salmonella enterica subsp. enterica serovar Anatum str. CFSAN003960


organism_name: Salmonella enterica subsp. enterica serovar Anatum str. CFSAN003969


organism_name: Salmonella enterica subsp. enterica serovar Anatum str. CFSAN003950


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Paratyphi A


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004158


asm_submitter: FDA

organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004160


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004141


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004156


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004146


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004027


organism_name: Salmonella enterica subsp. enterica serovar Anatum str. CFSAN003948


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004133


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Typhi


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004034


organism_name: Salmonella enterica subsp. enterica serovar Anatum str. CFSAN003965


organism_name: Salmonella enterica


isolate: whole organism


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Paratyphi A


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004159


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004142


asm_submitter: USDA FSIS

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004154


organism_name: Klebsiella pneumoniae


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. CFSAN004135


asm_submitter: Centers for Disease Control and Prevention


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


infraspecific_name: strain=ST48 B18:H11


infraspecific_name: strain=ST10 ONT:H32


infraspecific_name: strain=ST710 B9:H30


organism_name: Escherichia albertii


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Muenster


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Salmonella enterica


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


infraspecific_name: strain=E. coli


isolate: Faeces 1


infraspecific_name: strain=ST48 O4:H26


infraspecific_name: strain=ST1727 ONT:H14


infraspecific_name: strain=ST58 O8:H25


infraspecific_name: strain=ST58 ONT:H37


infraspecific_name: strain=ST361 O9:H30


infraspecific_name: strain=ST641 O70:H10


infraspecific_name: strain=ST1421 O9:H4


infraspecific_name: strain=ST963 ONT:H18


organism_name: Salmonella enterica subsp. enterica serovar Paratyphi A


organism_name: Salmonella enterica subsp. enterica serovar Anatum str. CFSAN003945


organism_name: Salmonella enterica subsp. enterica serovar Anatum str. CFSAN003943


organism_name: Salmonella enterica subsp. enterica serovar Anatum str. CFSAN003944


organism_name: Salmonella enterica subsp. enterica serovar Anatum str. CFSAN003938


organism_name: Salmonella enterica subsp. enterica serovar Anatum str. CFSAN003942


organism_name: Salmonella enterica subsp. enterica serovar Anatum str. CFSAN003937


organism_name: Salmonella enterica subsp. enterica serovar Anatum str. CFSAN003936


organism_name: Salmonella enterica subsp. enterica serovar Anatum str. CFSAN003935


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Staphylococcus aureus


infraspecific_name: strain=MRSA


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Campylobacter jejuni


asm_submitter: Shandong University of Technology

organism_name: Paracoccus benzoatiresistens

paired_asm_comp: identical

refseq_category: reference genome

relation_to_type_material: assembly from type material


asm_submitter: A*STAR

excluded_from_refseq: many frameshifted proteins

infraspecific_name: strain=ATCC 31975

organism_name: Streptomyces lydicus


asm_submitter: University Hospital of Besancon

assembly_level: Scaffold

infraspecific_name: strain=YIK

organism_name: Pseudomonas aeruginosa


excluded_from_refseq: unverified source organism; annotation fails completeness check; many frameshifted proteins

infraspecific_name: strain=ATCC 31713

organism_name: Streptomyces noursei


asm_submitter: University of Arizona

organism_name: Pseudomonas syringae pv. tomato


infraspecific_name: strain=ATCC 31561

organism_name: Streptomyces mirabilis


infraspecific_name: strain=ATCC 12757

relation_to_type_material: assembly from heterotypic synonym type material


excluded_from_refseq: genome length too small; many frameshifted proteins

infraspecific_name: strain=ATCC 11455a


asm_submitter: Chulalongkorn University

assembly_level: Complete Genome

organism_name: Lentilactobacillus terminaliae


infraspecific_name: strain=ATCC 21481

organism_name: Streptomyces diastatochromogenes


infraspecific_name: strain=ATCC 23862


organism_name: Clostridioides difficile


asm_submitter: Anhui normal university

organism_name: Rhodococcus sp. A5(2022)


asm_submitter: Universite Laval

infraspecific_name: strain=ATCC 25922

organism_name: Escherichia coli


asm_submitter: Australian Centre for Ecogenomics

excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Caldilineaceae bacterium


organism_name: Oligoflexia bacterium


organism_name: Rhodospirillaceae bacterium


organism_name: Gammaproteobacteria bacterium


excluded_from_refseq: derived from metagenome

organism_name: Candidatus Palauibacter rhopaloidicola


asm_submitter: USDA Animal Plant Health Inspection Service-National Veterinary Services Laboratories - DBPL

organism_name: Leptospira borgpetersenii


annotation_name: Annotation submitted by North Carolina State University

annotation_provider: North Carolina State University

asm_submitter: North Carolina State University

infraspecific_name: strain=DSM 8991

organism_name: Caldicellulosiruptor naganoensis


infraspecific_name: strain=DSM 7040

organism_name: Caldicellulosiruptor acetigenus


organism_name: Leptospira santarosai


asm_submitter: National Center for Biotechnology Information

organism_name: Staphylococcus aureus


asm_submitter: CDC

organism_name: Salmonella enterica


asm_submitter: Health Protection Agency


asm_submitter: Center for Food Safety and Applied Nutrition


asm_submitter: FDA/CFSAN

organism_name: Listeria monocytogenes


asm_submitter: FDA

organism_name: Campylobacter jejuni


organism_name: Listeria innocua


organism_name: Shigella flexneri


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter coli


organism_name: Escherichia coli