asm_submitter: The National University of Malaysia (UKM)

organism_name: Staphylococcus aureus


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: Health Protection Agency

assembly_level: Contig

assembly_type: haploid

excluded_from_refseq: from large multi-isolate project

genome_rep: Full

group: bacteria

organism_name: Escherichia albertii

release_type: Major

version_status: latest


assembly_level: Scaffold

paired_asm_comp: identical


asm_submitter: Chinese Center for Disease Control and Prevention

organism_name: Enterococcus innesii


asm_submitter: Faculty of Agricultural Technology

organism_name: Lactiplantibacillus plantarum subsp. plantarum


asm_submitter: Korea Research Institute of Bioscience and Biotechnology

organism_name: Niveispirillum sp. BGYR6


organism_name: Aminobacter sp. HY435


organism_name: Serratia liquefaciens


organism_name: Bacillus altitudinis


organism_name: Bacillus velezensis


organism_name: Acinetobacter sp. HY1485


organism_name: Serratia marcescens


organism_name: Arthrobacter sp. HY1533


organism_name: Kocuria massiliensis


asm_submitter: Institute of Medicinal Biotechnology

infraspecific_name: strain=CPCC 205716

organism_name: Herbiconiux gentiana

refseq_category: reference genome

relation_to_type_material: assembly from type material


asm_submitter: American University of Nigeria

organism_name: Caldifermentibacillus hisashii


asm_submitter: University of Washington Laboratory Medicine

assembly_level: Chromosome

organism_name: Treponema pallidum


asm_submitter: Zhejiang University of Technology

assembly_level: Complete Genome

organism_name: Pseudomonas citronellolis


asm_submitter: City University of Hong Kong

infraspecific_name: strain=ATCC 13032

organism_name: Corynebacterium glutamicum


asm_submitter: University of Galway

organism_name: Pantoea piersonii


asm_submitter: UCIBIO/REQUIMTE, Faculty of Pharmacy, University of Porto

organism_name: Corynebacterium curieae


organism_name: Corynebacterium sp. c6VSa_13


organism_name: Corynebacterium lehmanniae


organism_name: Corynebacterium evansiae


organism_name: Corynebacterium meitnerae


organism_name: Corynebacterium sp. c24U_166


organism_name: Corynebacterium marquesiae


organism_name: Corynebacterium macclintockiae


organism_name: Corynebacterium yonathiae


organism_name: Corynebacterium hesseae


asm_submitter: The Second Affiliated Hospital of Zhejiang University School of Medicine, Zhejiang University

organism_name: Escherichia coli


asm_submitter: Alagappa University

organism_name: Nocardia farcinica


asm_submitter: Kyung Hee University

infraspecific_name: strain=HJ

organism_name: Weissella koreensis


asm_submitter: University of Queensland

excluded_from_refseq: contaminated; derived from metagenome

group: archaea

organism_name: Methanocorpusculum sp.


asm_submitter: Shenzhen People's Hospital

organism_name: Klebsiella pneumoniae


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome


asm_submitter: Saint Petersburg Pasteur's Institute

organism_name: Salmonella enterica subsp. enterica serovar Paratyphi B var. L(+) tartrate +


asm_submitter: Tarim University

excluded_from_refseq: fragmented assembly

infraspecific_name: strain=TRM 76130

organism_name: Streptomyces sp. TRM 76130


infraspecific_name: strain=TRM 76172

organism_name: Streptomyces mutabilis


annotation_name: Annotation submitted by Imperial College London

annotation_provider: Imperial College London

asm_submitter: Imperial College London

organism_name: Pseudomonas aeruginosa


asm_submitter: Guangzhou Institutes of Biomedicine and Health

infraspecific_name: strain=MF GZ001

organism_name: Mycolicibacterium fortuitum


asm_submitter: Alexandria University

organism_name: Enterococcus faecium


asm_submitter: Shanghai Ocean University

organism_name: Shewanella sp. MTB7


asm_submitter: University of Nottingham

infraspecific_name: strain=OBBP

organism_name: Methylocystis parvus OBBP


asm_submitter: College of Veterinary Medicine, King Faisal University

infraspecific_name: strain=isb 1

organism_name: Dickeya lacustris


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Campylobacter jejuni


excluded_from_refseq: unverified source organism; from large multi-isolate project

organism_name: Enterobacter asburiae


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Enterobacter hormaechei


organism_name: Klebsiella michiganensis


asm_submitter: Beijing Institute of Microbiology and Epidemiology


asm_submitter: Instituto Adolfo Lutz

organism_name: Pseudomonas putida


asm_submitter: Korea Institute of Geoscience and Mineral Resources

organism_name: Rhodococcus sp. BH5


asm_submitter: University of Maryland Baltimore

organism_name: Lactobacillus mulieris


organism_name: Lactobacillus crispatus


organism_name: Lactobacillus jensenii


organism_name: Lactobacillus iners


organism_name: Lactobacillus gasseri


asm_submitter: Columbia University Medical Center

organism_name: Klebsiella pneumoniae


organism_name: Escherichia coli


organism_name: Klebsiella quasipneumoniae


organism_name: Enterobacter cloacae


excluded_from_refseq: annotation fails completeness check; many frameshifted proteins


asm_submitter: Inner Mongolia Agricultural University

organism_name: Lactiplantibacillus plantarum


asm_submitter: Universiteit Gent

organism_name: Brachyspira hyodysenteriae


excluded_from_refseq: annotation fails completeness check


asm_submitter: Agricultural University of Athens

infraspecific_name: strain=ART SEL2

organism_name: Vibrio sp. ART SEL2


infraspecific_name: strain=La 4.2.2

organism_name: Vibrio sp. La 4.2.2


infraspecific_name: strain=Makdt

organism_name: Vibrio sp. Makdt


organism_name: Vibrio sp. LaRot3


organism_name: Vibrio sp. MarTm2


organism_name: Vibrio sp. 2art


infraspecific_name: strain=NFR

organism_name: Vibrio sp. NFR


infraspecific_name: strain=RW

organism_name: Vibrio sp. RW


organism_name: Vibrio sp. MM46


organism_name: Vibrio sp. T11.5


asm_submitter: Chinese Academy of Medical Sciences & Peking Union Medical College

infraspecific_name: strain=CPCC 204708

organism_name: Solirubrobacter deserti


infraspecific_name: strain=KCTC 29190

organism_name: Solirubrobacter phytolaccae


infraspecific_name: strain=DSM 21036

organism_name: Solirubrobacter ginsenosidimutans


excluded_from_refseq: contaminated; not used as type

infraspecific_name: strain=KCTC 29222

organism_name: Solirubrobacter taibaiensis


asm_submitter: Ocean University of China

organism_name: Mesoflavibacter profundi


organism_name: Pseudomonas aeruginosa


asm_submitter: Helmholtz Centre for Environmental Research - UFZ

organism_name: Arthrobacter sp. B2a2-09


asm_submitter: Liaocheng University

organism_name: Vibrio owensii


organism_name: Vibrio parahaemolyticus


asm_submitter: Chulalongkorn University

organism_name: Levilactobacillus brevis


asm_submitter: Pondicherry University

organism_name: Stutzerimonas frequens


organism_name: Vibrio alginolyticus


asm_submitter: University of Tehran

excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Pseudomonadota bacterium


excluded_from_refseq: derived from metagenome; genus undefined


organism_name: Bacteroidota bacterium


organism_name: Actinomycetota bacterium


organism_name: Chloroflexota bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: bacterium


organism_name: Planctomycetota bacterium


organism_name: Cyanobacteriota bacterium


organism_name: Acidobacteriota bacterium


organism_name: Gemmatimonadota bacterium


asm_submitter: Peking University

organism_name: Cyanobacteria bacterium FC1


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


asm_submitter: Sanming University

infraspecific_name: strain=DSM 17273

organism_name: Methanococcoides alaskense


asm_submitter: Nanjing University of Science and Technology

organism_name: Sutcliffiella sp. NC1


organism_name: Citricoccus sp. NR2


asm_submitter: Korea Research Institute of Bioscience and Biotechnology

organism_name: Zunongwangia sp. HRR-M8


organism_name: Zunongwangia sp. HGR-M22


annotation_name: Annotation submitted by Korea Institute of Fusion Energy

annotation_provider: Korea Institute of Fusion Energy

asm_submitter: Korea Institute of Fusion Energy

organism_name: Bacillus safensis


asm_submitter: Sugarcane Research Institute, Yunnan Academy of Agricultural Sciences

organism_name: Candidatus Phytoplasma sacchari


asm_submitter: onam National Institute of Biological Resources

excluded_from_refseq: unverified source organism

organism_name: Sinirhodobacter sp. HNIBRBA609


asm_submitter: University of Nevada, Las Vegas

infraspecific_name: strain=YIM 72310

organism_name: Tepidiforma flava


asm_submitter: Korea Atomic Energy Research Institute

infraspecific_name: strain=MBLB 0692

organism_name: Bacillus velezensis


organism_name: Algoriphagus halophytocola


asm_submitter: University of Zurich

organism_name: Clostridium estertheticum


asm_submitter: Assam Agricultural University

organism_name: Bacillus altitudinis


asm_submitter: Chang Gung Memorial Hospital

organism_name: Staphylococcus haemolyticus


asm_submitter: South China Agricultural University

organism_name: Stutzerimonas stutzeri


asm_submitter: University of Saskatchewan

organism_name: Escherichia coli


asm_submitter: Beijing Institute of Microbiology and Epidemiology

organism_name: Pseudomonas aeruginosa


asm_submitter: Zhejiang A&F University

organism_name: Buttiauxella sp. WJP83


asm_submitter: Centre for Chemical Biology

infraspecific_name: strain=WH

organism_name: Saprospira grandis


asm_submitter: Nutrition &Health Technology Center

infraspecific_name: strain=VHProbi V60

organism_name: Lactococcus lactis


asm_submitter: CSIR-Institute of Himalayan Bioresource Technology

organism_name: Cryobacterium breve


annotation_name: Annotation submitted by Georg-August-University Goettingen

annotation_provider: Georg-August-University Goettingen

asm_submitter: Georg-August-University Goettingen

organism_name: Stenotrophomonas maltophilia


asm_submitter: CSIR-North East Institute of Science and Technology

organism_name: Serratia liquefaciens


organism_name: Thauera sp. WB-2


asm_submitter: University of Pretoria

organism_name: Bradyrhizobium xenonodulans


asm_submitter: Institute of Antibiotics

organism_name: Klebsiella pneumoniae subsp. pneumoniae


organism_name: Alcaligenes faecalis


organism_name: Comamonas aquatica


organism_name: Pseudomonas putida


organism_name: Citrobacter freundii


organism_name: Enterobacter hormaechei


organism_name: Pseudomonas sp. NY11382


organism_name: Providencia sp. PROV188


asm_submitter: University of Alabama in Huntsville

organism_name: Klebsiella pneumoniae


organism_name: Klebsiella aerogenes


organism_name: Enterobacter asburiae


organism_name: Klebsiella michiganensis


organism_name: Enterobacter cloacae


organism_name: Enterobacter kobei


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


asm_submitter: CDC

organism_name: Salmonella enterica


organism_name: Escherichia coli


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Meleagridis


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Uganda


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: National Center for Biotechnology Information

organism_name: Klebsiella pneumoniae


organism_name: Staphylococcus aureus


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Vibrio cholerae


organism_name: Vibrio parahaemolyticus


organism_name: Campylobacter jejuni


asm_submitter: Manipal Academy of Higher Education

organism_name: Burkholderia pseudomallei


asm_submitter: Nanjing Normal University

organism_name: Streptomonospora mangrovi


asm_submitter: bitBiome, Inc.

excluded_from_refseq: derived from single cell

organism_name: Bacteroides xylanisolvens


organism_name: Enterococcus faecium


organism_name: Escherichia coli


organism_name: Phocaeicola vulgatus


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


organism_name: Staphylococcus aureus


organism_name: Klebsiella pneumoniae


organism_name: Klebsiella quasipneumoniae


organism_name: Campylobacter jejuni


organism_name: Escherichia coli


organism_name: Shigella flexneri


organism_name: Salmonella enterica


organism_name: Listeria monocytogenes


asm_submitter: CDPHE SARS-CoV-2 submissions


organism_name: Klebsiella variicola


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Newport


asm_submitter: Health Protection Agency


organism_name: Shigella sonnei


organism_name: Citrobacter freundii


organism_name: Pseudomonas aeruginosa


asm_submitter: University of Tehran

organism_name: Cyanobacteriota bacterium


organism_name: Bacteroidota bacterium


organism_name: Fidelibacterota bacterium


organism_name: Pseudomonadota bacterium


organism_name: Planctomycetota bacterium


organism_name: Chloroflexota bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: archaeon


organism_name: bacterium


organism_name: Nitrospirota bacterium


organism_name: Thermoproteota archaeon


organism_name: Nitrospinota bacterium


asm_submitter: Federal State Budgetary Scientific Institution "Institute of Experimental Medicine"

organism_name: Acinetobacter baumannii


asm_submitter: University of Chicago

organism_name: Clostridioides difficile


asm_submitter: Mahidol University

organism_name: Nonomuraea corallina


asm_submitter: UNIVERSITY PUTRA MALAYSIA

organism_name: Burkholderia gladioli


infraspecific_name: strain=DSM 43553

organism_name: Nonomuraea ferruginea


organism_name: Cyanobacteriota bacterium


organism_name: Bacteroidota bacterium


organism_name: Bacillota bacterium


organism_name: Pseudomonadota bacterium


organism_name: Planctomycetota bacterium


organism_name: Chloroflexota bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Gemmatimonadota bacterium


excluded_from_refseq: contaminated; derived from metagenome; genus undefined


organism_name: bacterium


asm_submitter: Bursa Uludag University

excluded_from_refseq: annotation fails completeness check; genome length too large; many frameshifted proteins; not used as type

organism_name: Plesiomonas shigelloides subsp. oncorhynchi


asm_submitter: Instituto Ramon y Cajal de Investigacion Sanitaria

organism_name: Klebsiella pneumoniae


asm_submitter: Northeast Agricultural University

infraspecific_name: strain=DSM 44727

organism_name: Glycomyces algeriensis


organism_name: Glycomyces luteolus


organism_name: Acidobacteriota bacterium


infraspecific_name: strain=DSM 44724

organism_name: Glycomyces lechevalierae


organism_name: Nanobdellota archaeon


organism_name: Fidelibacterota bacterium


organism_name: Thermoproteota archaeon


organism_name: Bacteroidota bacterium


organism_name: Nitrospirota bacterium


organism_name: Pseudomonadota bacterium


organism_name: Nitrospinota bacterium


organism_name: Planctomycetota bacterium


organism_name: Cyanobacteriota bacterium


organism_name: archaeon


organism_name: bacterium


organism_name: Chloroflexota bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Candidatus Poribacteria bacterium


asm_submitter: East China University of Science and Technology

organism_name: Diaphorobacter sp. ED-3


asm_submitter: Ocean University of China

organism_name: Bacillus velezensis


asm_submitter: Sun Yat-sen School of Medicine, Sun Yat-sen University

excluded_from_refseq: annotation fails completeness check; missing tRNA genes

organism_name: Campylobacter coli


asm_submitter: Tokyo Medical And Dental University

organism_name: Clostridioides difficile R20291


asm_submitter: Huazhong Angricultural University

infraspecific_name: strain=TZ

organism_name: Brucella melitensis


asm_submitter: Korea Research Institute of Bioscience and Biotechnology

infraspecific_name: strain=PAMB 00755

organism_name: Sphingomonas abietis


asm_submitter: National Center for Biotechnology Information

organism_name: Klebsiella pneumoniae


asm_submitter: Hunan University of Arts and Science

infraspecific_name: strain=HUAS 2-6

organism_name: Streptomyces camelliae


organism_name: Bacillus cereus


asm_submitter: Korea Polar Research Institute

infraspecific_name: strain=KCTC 22745

organism_name: Hymenobacter yonginensis


asm_submitter: National Pingtung University of Science and Technology

organism_name: Bacillus tropicus


asm_submitter: Center for Genomic Sciences

organism_name: Acidocella sp. MX-AZ03


asm_submitter: University of Washington Laboratory Medicine

organism_name: Treponema pallidum


annotation_name: Annotation submitted by Bielefeld University

annotation_provider: Bielefeld University

asm_submitter: Bielefeld University

infraspecific_name: strain=DSM 40276

organism_name: Streptomyces nigrescens


asm_submitter: Imperial College London

organism_name: Pseudomonas aeruginosa


infraspecific_name: strain=HUAS 3-15

organism_name: Kitasatospora cathayae


asm_submitter: Shenyang Pharmaceutical University

organism_name: Sphingobacterium sp. SYP-B4668


organism_name: Paenibacillus sp. SYP-B4298


asm_submitter: Guangdong Ocean University

organism_name: Clostridium butyricum


asm_submitter: University of Chinese Academy of Sciences

infraspecific_name: strain=DSM 43536

organism_name: Mycolicibacterium neoaurum


asm_submitter: NIAID

infraspecific_name: strain=RMSFV

organism_name: Coxiella burnetii


annotation_name: Annotation submitted by Asia Pacific Centre for Animal Health

annotation_provider: Asia Pacific Centre for Animal Health

asm_submitter: The University of Melbourne

organism_name: Mycoplasmopsis edwardii


asm_submitter: Fundacion MEDINA

organism_name: Kribbella sp. CA-293567


asm_submitter: University of West Georgia

organism_name: Sphingobium yanoikuyae


asm_submitter: University of Manitoba

excluded_from_refseq: genus undefined

organism_name: Hyphomonadaceae bacterium ML37


organism_name: Hyphomonadaceae bacterium BL14


asm_submitter: Julius Kuehn-Institut

organism_name: Bacillus thuringiensis serovar tenebrionis


asm_submitter: Medical University Graz

organism_name: Klebsiella oxytoca


asm_submitter: National Center for Biotechnology Information

organism_name: Staphylococcus aureus


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


asm_submitter: CDC

organism_name: Escherichia coli


organism_name: Salmonella enterica


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

isolate: whole organism


organism_name: Legionella pneumophila


asm_submitter: FDA

organism_name: Enterococcus faecalis


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


asm_submitter: BGI-Shenzhen

organism_name: Lachnospiraceae bacterium AM109-64


organism_name: Firmicutes bacterium AM109-26


organism_name: Bacteroides stercoris


organism_name: Bifidobacterium longum


organism_name: Streptococcus salivarius


organism_name: Streptococcus anginosus


organism_name: Klebsiella pneumoniae


organism_name: Lactococcus garvieae


organism_name: Streptococcus mutans


organism_name: Streptococcus pasteurianus


organism_name: Weissella confusa


organism_name: Enterococcus malodoratus


organism_name: Catenibacterium mitsuokai


organism_name: Staphylococcus aureus


organism_name: Kocuria marina


organism_name: Mediterraneibacter faecis


organism_name: Escherichia coli


organism_name: Staphylococcus epidermidis


organism_name: Vagococcus fluvialis


organism_name: Brachybacterium paraconglomeratum


organism_name: Enterococcaceae bacterium AM104-70


organism_name: Enterococcaceae bacterium AM104-76


organism_name: Propionibacteriaceae bacterium AM104-82


organism_name: Rhizobiaceae bacterium AM104-69


organism_name: Gordonia jacobaea


organism_name: Microbacterium testaceum


organism_name: Streptococcus agalactiae


organism_name: Lacticaseibacillus paracasei


organism_name: Lactobacillus acidophilus


organism_name: Microbacterium maritypicum


organism_name: Streptococcaceae bacterium AM104-57


organism_name: Enterococcaceae bacterium AM104-56


organism_name: Enterococcaceae bacterium AM104-55


organism_name: Kocuria marina


organism_name: Enterococcaceae bacterium AM104-50


organism_name: Enterococcus malodoratus


organism_name: Bifidobacterium animalis


organism_name: Bifidobacterium adolescentis


organism_name: Enterococcus avium


organism_name: Catenibacterium mitsuokai


organism_name: Coriobacteriaceae bacterium AM104-06


organism_name: Lachnospiraceae bacterium AM10-3A


organism_name: Lactococcus petauri


organism_name: Enterococcus faecalis


organism_name: Coriobacteriaceae bacterium AM102-74


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Enterococcus thailandicus


organism_name: Bifidobacterium longum


organism_name: Enterococcus casseliflavus


organism_name: Lactobacillus acidophilus


organism_name: Rothia kristinae


organism_name: Mediterraneibacter gnavus


organism_name: Bacteroides stercoris


organism_name: Escherichia coli


organism_name: Parabacteroides merdae


organism_name: Parabacteroides distasonis


organism_name: Bacteroides nordii


organism_name: Clostridium fessum


organism_name: Bacteroides thetaiotaomicron


organism_name: Bacteroides ovatus


organism_name: Bifidobacterium adolescentis


organism_name: Blautia wexlerae


organism_name: Longicatena caecimuris


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Phocaeicola vulgatus


organism_name: Bacillus mobilis


organism_name: Streptococcus anginosus


organism_name: Klebsiella pneumoniae


organism_name: Enterococcus lactis


organism_name: Citrobacter freundii


organism_name: Lactococcus petauri


organism_name: Escherichia coli


organism_name: Enterococcus faecalis


organism_name: Lactiplantibacillus plantarum


organism_name: Streptococcus salivarius


organism_name: Bifidobacterium longum


organism_name: Lactococcus lactis


organism_name: Clostridium perfringens


organism_name: Limosilactobacillus fermentum


organism_name: Fusicatenibacter saccharivorans


organism_name: Thomasclavelia ramosa


organism_name: Staphylococcus warneri


organism_name: Bacillus mobilis


organism_name: Holdemania filiformis


organism_name: Bifidobacterium adolescentis


organism_name: Bacteroides uniformis


organism_name: Phocaeicola plebeius


organism_name: Bacteroides fragilis


organism_name: Lacticaseibacillus paracasei


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Bacteroides ovatus


organism_name: Bacillus cereus


organism_name: Escherichia coli


organism_name: Bacteroides xylanisolvens


organism_name: Lactiplantibacillus plantarum


organism_name: Bifidobacterium longum


organism_name: Faecalibacillus intestinalis


organism_name: Lachnospiraceae bacterium AM100_BB17A


organism_name: Lachnospiraceae bacterium AM100_B9A


organism_name: Blautia obeum


organism_name: Mediterraneibacter faecis


organism_name: Coriobacteriaceae bacterium AM100_B31A


excluded_from_refseq: contaminated

organism_name: Oliverpabstia intestinalis


organism_name: Blautia massiliensis (ex Durand et al. 2017)


organism_name: Hungatella effluvii


organism_name: Dorea amylophila


organism_name: Blautia wexlerae


organism_name: Coprococcus sp. AM100_B19A


organism_name: Faecalibacterium prausnitzii


organism_name: Megamonas funiformis


organism_name: Lachnospiraceae bacterium AM100_B13A


organism_name: Anaerostipes hadrus


excluded_from_refseq: from large multi-isolate project

organism_name: Bifidobacterium longum


organism_name: Dorea formicigenerans


organism_name: Lachnospiraceae bacterium AM100_B1_30A


organism_name: Pseudocoprococcus catus


organism_name: Gemmiger formicilis


organism_name: Enterococcus faecium


organism_name: Holdemanella porci


organism_name: Blautia faecis


organism_name: Bacteroides thetaiotaomicron


organism_name: Bacteroidaceae bacterium AM100_104_47A


organism_name: Coprobacillaceae bacterium AM100_104_2A


organism_name: Cutibacterium avidum


organism_name: Phocaeicola massiliensis


organism_name: Staphylococcus epidermidis


organism_name: Enterocloster citroniae


organism_name: [Ruminococcus] lactaris


organism_name: Bifidobacterium bifidum


organism_name: Limosilactobacillus mucosae


organism_name: Bifidobacterium adolescentis


organism_name: Erysipelotrichaceae bacterium AM08-3


organism_name: Phocaeicola dorei


organism_name: Hungatella effluvii


organism_name: Collinsella tanakaei


organism_name: Longicatena caecimuris


organism_name: [Clostridium] scindens


organism_name: Streptococcus koreensis


organism_name: Bacteroides uniformis


organism_name: Bifidobacterium longum


organism_name: Lactobacillus acidophilus


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Bifidobacterium animalis


organism_name: Bacillus velezensis


organism_name: Phocaeicola vulgatus


organism_name: Acutalibacteraceae bacterium AM04S-51


organism_name: Bacillus paranthracis


organism_name: Escherichia coli


organism_name: Coriobacteriaceae bacterium AM04S-38


organism_name: Bifidobacterium adolescentis


organism_name: Coriobacteriaceae bacterium AM04S-29


organism_name: Parabacteroides distasonis


organism_name: Blautia faecis


organism_name: Faecalibacterium prausnitzii


organism_name: Caecibacter sp. AFF13-5A


organism_name: Enterocloster clostridioformis


organism_name: Bifidobacterium pseudolongum subsp. globosum


organism_name: Bifidobacterium longum


organism_name: Leuconostoc mesenteroides


organism_name: Ruminococcus bromii


organism_name: Acutalibacteraceae bacterium AM04S-16


organism_name: Coriobacteriaceae bacterium AM04S-08


organism_name: Acutalibacteraceae bacterium AM04S-15


organism_name: Phocaeicola vulgatus


organism_name: Streptococcus salivarius


organism_name: Streptococcus koreensis


organism_name: Streptococcus parasanguinis


organism_name: Bacteroides intestinalis


organism_name: Bacteroides cellulosilyticus


organism_name: Bacteroides caccae


organism_name: Longicatena caecimuris


organism_name: Bifidobacterium breve


organism_name: Coprococcus sp. AF99-45


organism_name: Blautia intestinalis


organism_name: Coprococcus aceti


organism_name: Eubacterium ramulus


organism_name: Dorea formicigenerans


organism_name: Blautia massiliensis (ex Durand et al. 2017)


organism_name: Megamonas funiformis


organism_name: Bacteroides eggerthii


organism_name: Dorea amylophila


organism_name: Lachnospiraceae bacterium AF98-51


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Lachnospiraceae bacterium AF98-36


organism_name: Bifidobacterium adolescentis


organism_name: Bacteroides intestinalis


organism_name: Segatella copri


organism_name: Erysipelotrichaceae bacterium AF98-31


organism_name: Blautia wexlerae


organism_name: Cutibacterium acnes


organism_name: Blautia obeum


organism_name: Holdemanella biformis


organism_name: Lachnospiraceae bacterium AF97-11M2TA


organism_name: Lachnospiraceae bacterium AF97-08DTA


organism_name: Clostridiaceae bacterium AF97-07pH10A


organism_name: Clostridium fessum


organism_name: Lachnospiraceae bacterium AF96-14M2BTA


organism_name: Lachnospiraceae bacterium AF96-09pH9TA


organism_name: Faecalibacillus intestinalis


organism_name: Lachnospiraceae bacterium AF96-08pH9A


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Limosilactobacillus mucosae


organism_name: Lachnospiraceae bacterium AF94-39M2A


organism_name: Faecalimonas umbilicata


organism_name: Streptococcus infantarius


organism_name: Bifidobacterium longum


organism_name: Lachnospiraceae bacterium AF94-01pH10A


organism_name: Staphylococcus capitis


organism_name: Agathobaculum butyriciproducens


organism_name: Candidatus Collinsella stercoripullorum


organism_name: Lachnospiraceae bacterium AF92-12TA


organism_name: Levilactobacillus brevis


organism_name: Lactococcus petauri


organism_name: Bifidobacterium adolescentis


organism_name: Lachnospiraceae bacterium AF91-09b3A


organism_name: Staphylococcus aureus


organism_name: Ligilactobacillus acidipiscis


organism_name: Atopobiaceae bacterium AF91-08IFCA


organism_name: Lactiplantibacillus plantarum


organism_name: Enterococcus faecalis


organism_name: Ligilactobacillus ruminis


organism_name: Lacticaseibacillus suilingensis


organism_name: Lachnospiraceae bacterium AF90S-19M2BA


organism_name: Campylobacter coli


organism_name: Clostridiaceae bacterium AF90-09M1A


organism_name: Lachnospiraceae bacterium AF90S-01pH9BA


organism_name: Paenibacillus timonensis


organism_name: Longicatena caecimuris


organism_name: Oscillospiraceae bacterium AF88-14pH9A


organism_name: Lachnospiraceae bacterium AF87-14TA


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Lachnospiraceae bacterium AF88-01pH10A


organism_name: Coprobacter fastidiosus


excluded_from_refseq: contaminated; unverified source organism

organism_name: Butyricicoccus sp. AF86-03b2A


organism_name: Staphylococcus aureus


organism_name: Blautia obeum


organism_name: Parabacteroides bouchesdurhonensis


organism_name: Candidatus Alistipes pullistercoris


organism_name: Enterobacter cloacae


organism_name: Paenibacillaceae bacterium AF83-02pH10A


organism_name: Butyribacter intestini


organism_name: Lactobacillus johnsonii


organism_name: Veillonellaceae bacterium AF80-09CM05A


organism_name: Acidaminococcus massiliensis


organism_name: Allobaileyella intestinalis


organism_name: Bacteroidaceae bacterium AF79-12b3TA


organism_name: Streptococcaceae bacterium AF77-01CM03A


organism_name: Bifidobacterium adolescentis


organism_name: Tannerellaceae bacterium AM85-06pH10A


organism_name: Bacteroidaceae bacterium AM84-04b12A


organism_name: Veillonellaceae bacterium AF80-05A


organism_name: Staphylococcus aureus


organism_name: Megasphaera elsdenii


organism_name: Lapidilactobacillus dextrinicus


organism_name: Mitsuokella multacida


organism_name: Ligilactobacillus salivarius


organism_name: Butyricicoccus sp. AM78-15b2TA


organism_name: Sanguibacteroides sp. AM78-02pH3A


organism_name: Mediterraneibacter massiliensis


organism_name: Lactobacillus panisapium


organism_name: Ruthenibacterium lactatiformans


organism_name: Lactobacillus johnsonii


organism_name: Pediococcus acidilactici


organism_name: Faecalimonas umbilicata


organism_name: Lachnospiraceae bacterium AM75-20pH9TA


organism_name: Enterocloster citroniae


organism_name: Anaerostipes hominis (ex Lee et al. 2021)


organism_name: Lachnospiraceae bacterium AM75-12pH9A


organism_name: Staphylococcus aureus


organism_name: Lactobacillus paragasseri


organism_name: Firmicutes bacterium AM75-01pH9A


organism_name: Lacticaseibacillus paracasei


organism_name: Blautia intestinalis


organism_name: Ligilactobacillus ruminis


organism_name: Fusobacterium mortiferum


organism_name: Lachnospiraceae bacterium AM73-11pH9A


organism_name: Veillonella parvula


organism_name: Bacteroidaceae bacterium AM72-8-b13A


organism_name: Clostridium fessum


organism_name: Bacteroidaceae bacterium AM72-11pH9A


organism_name: Clostridiaceae bacterium AM72-11pH10A


organism_name: Lachnospiraceae bacterium AM67-5ACA


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Escherichia coli


organism_name: Bifidobacterium longum


organism_name: Eubacterium ramulus


organism_name: Lachnospiraceae bacterium AM67-14ACA


organism_name: Bifidobacterium adolescentis


organism_name: Weissella cibaria


organism_name: Holdemanella porci


organism_name: Lachnospiraceae bacterium AM65-8A


organism_name: Cronobacter sakazakii


organism_name: Holdemanella biformis


organism_name: Staphylococcus aureus


organism_name: Lachnospiraceae bacterium AM65-26MHA


organism_name: Enterococcus lactis


organism_name: Oliverpabstia intestinalis


organism_name: Klebsiella quasipneumoniae


organism_name: Clostridium fessum


organism_name: Fusicatenibacter saccharivorans


organism_name: Pediococcus pentosaceus


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Enterobacter kobei


organism_name: Lachnospiraceae bacterium AM64-3MHA


organism_name: Bifidobacterium adolescentis


organism_name: Enterococcus avium


organism_name: Hoskinsella hominis


organism_name: Enterococcus faecalis


organism_name: Bifidobacterium bifidum


organism_name: Megamonas funiformis


organism_name: Staphylococcus aureus


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Blautia massiliensis (ex Durand et al. 2017)


organism_name: Peptacetobacter hiranonis


organism_name: Fusobacteriaceae bacterium AM62-5ACA


organism_name: Salmonella enterica


organism_name: Roseburia intestinalis


organism_name: Enterococcus lactis


organism_name: Fusobacteriaceae bacterium AM62-09pH9A


organism_name: Lachnospiraceae bacterium AM62-08pH9A


organism_name: Citrobacter youngae


organism_name: Klebsiella aerogenes


organism_name: Bifidobacterium longum


organism_name: Lactobacillus delbrueckii


organism_name: Bacillus velezensis


organism_name: Ruthenibacterium lactatiformans


organism_name: Enterocloster bolteae


organism_name: Lachnospiraceae bacterium AM59-42XD-r


organism_name: Bacteroides thetaiotaomicron


organism_name: Escherichia coli


organism_name: Thomasclavelia ramosa


organism_name: Bacteroides ovatus


organism_name: Limosilactobacillus fermentum


organism_name: Anaerobutyricum hallii


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Coriobacteriaceae bacterium AM58-1


organism_name: Eggerthella sinensis


organism_name: Citrobacter portucalensis


organism_name: Eggerthella lenta


organism_name: Lachnospiraceae bacterium AM55-16TS-r


organism_name: Faecalibacillus intestinalis


organism_name: Clostridium tertium


organism_name: Faecalibacterium prausnitzii


organism_name: Oliverpabstia intestinalis


organism_name: Bacteroides uniformis


organism_name: Lachnospiraceae bacterium AM53-3


organism_name: Lachnospiraceae bacterium AM53-6


organism_name: Ligilactobacillus salivarius


organism_name: Roseburia hominis


organism_name: Staphylococcus aureus


organism_name: Lachnospiraceae bacterium AM53-13BH


organism_name: Ruminococcaceae bacterium AM53-2BH


organism_name: Lachnospiraceae bacterium AM53-12


organism_name: Peptoniphilaceae bacterium AM52-5BH


organism_name: Bacteroides ovatus


organism_name: Coriobacteriaceae bacterium AM50-5


organism_name: Coriobacteriaceae bacterium AM49-12


organism_name: Ruminococcaceae bacterium AM49-21


organism_name: Fusobacterium varium


organism_name: Campylobacter coli


organism_name: Coriobacteriaceae bacterium AM48-5


organism_name: Eggerthella lenta


organism_name: Bacteroidaceae bacterium AM48-2


organism_name: Faecalibacillus intestinalis


organism_name: Lachnospiraceae bacterium AM46-4BH


organism_name: Lachnospiraceae bacterium AM46-1BH


organism_name: Mediterraneibacter faecis


organism_name: Bifidobacterium longum


organism_name: Faecalibacillus faecis


organism_name: Bifidobacterium adolescentis


organism_name: Bifidobacterium bifidum


organism_name: Ligilactobacillus ruminis


organism_name: Bacteroides eggerthii


organism_name: [Clostridium] leptum


organism_name: Atopobiaceae bacterium AM39-37BH


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Collinsella intestinalis


organism_name: Atopobiaceae bacterium AM39-12AC


organism_name: Candidatus Collinsella stercoripullorum


organism_name: Clostridiaceae bacterium AM38-9BH


organism_name: Mitsuokella multacida


organism_name: Streptococcus lutetiensis


organism_name: Veillonellaceae bacterium AM38-13BH-r


organism_name: Mediterraneibacter torques


organism_name: Coriobacteriaceae bacterium AM37-10BHA


organism_name: Bifidobacterium longum


organism_name: Faecalibacterium prausnitzii


organism_name: Longibaculum muris


organism_name: Lacticaseibacillus paracasei


organism_name: Staphylococcus aureus


organism_name: Bifidobacterium adolescentis


organism_name: Clostridium butyricum


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Bacteroides intestinalis


organism_name: Phocaeicola coprocola


organism_name: Bacillus paranthracis


organism_name: Faecalibacillus intestinalis


organism_name: Collinsella intestinalis


organism_name: Enterococcus lactis


organism_name: Cutibacterium acnes


organism_name: Mediterraneibacter torques


organism_name: Longicatena caecimuris


organism_name: Ruminococcus bromii


organism_name: Mediterraneibacter faecis


organism_name: Hoskinsella hominis


organism_name: Blautia obeum


organism_name: Phocaeicola vulgatus


organism_name: Enterocloster bolteae


organism_name: Blautia hansenii


organism_name: Streptococcus gordonii


organism_name: Bacteroides xylanisolvens


organism_name: Bacteroides uniformis


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Lactiplantibacillus plantarum


organism_name: Bifidobacterium longum


organism_name: Mediterraneibacter gnavus


organism_name: [Ruminococcus] lactaris


organism_name: Mitsuokella multacida


organism_name: Fusicatenibacter saccharivorans


organism_name: Segatella copri


organism_name: Blautia massiliensis (ex Durand et al. 2017)


organism_name: Bacteroides thetaiotaomicron


organism_name: Klebsiella quasipneumoniae


organism_name: Bifidobacterium adolescentis


organism_name: Bacteroidaceae bacterium AM22-7


organism_name: Coriobacteriaceae bacterium AM22-6-r


organism_name: Coriobacteriaceae bacterium AM22-20AC


organism_name: Bacteroidaceae bacterium AM22-20


organism_name: Bacteroides stercoris


organism_name: Dorea longicatena


organism_name: Coriobacteriaceae bacterium AM22-12AC-r


organism_name: Clostridium butyricum


organism_name: Sellimonas intestinalis


organism_name: Hungatella hathewayi


excluded_from_refseq: from large multi-isolate project; many frameshifted proteins

organism_name: Bifidobacterium longum


organism_name: Klebsiella pneumoniae


organism_name: Cutibacterium acnes


organism_name: Coriobacteriaceae bacterium AM20-24AC


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Parasutterella excrementihominis


organism_name: Blautia massiliensis (ex Durand et al. 2017)


organism_name: Amedibacterium intestinale


organism_name: Klebsiella variicola


organism_name: Escherichia coli


organism_name: Clostridium fessum


organism_name: Bifidobacterium bifidum


organism_name: Desulfovibrio legallii


organism_name: Lachnospiraceae bacterium AM18-3AC


organism_name: Bacteroides fragilis


organism_name: Fusobacterium varium


organism_name: Staphylococcus epidermidis


organism_name: Staphylococcus aureus


organism_name: Lactobacillus acidophilus


organism_name: Lactococcus garvieae


organism_name: Staphylococcus warneri


organism_name: Bifidobacterium longum


organism_name: Citrobacter portucalensis


organism_name: Enterococcus faecium


organism_name: Phocaeicola massiliensis


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Butyricimonas virosa


organism_name: Ligilactobacillus ruminis


organism_name: Escherichia coli


organism_name: Streptococcus anginosus


organism_name: Weissella cibaria


organism_name: Campylobacter coli


organism_name: Enterococcus lactis


organism_name: Lactococcus formosensis


organism_name: Enterococcus casseliflavus


organism_name: Lactococcus petauri


organism_name: Lactococcus lactis


organism_name: Enterococcus faecalis


organism_name: Aerococcus urinaeequi


organism_name: Phocaeicola coprocola


organism_name: Klebsiella pneumoniae


organism_name: Chryseobacterium indologenes


organism_name: Campylobacter jejuni


organism_name: Enterobacter kobei


organism_name: Coriobacteriaceae bacterium AM14-28


organism_name: Klebsiella michiganensis


organism_name: Klebsiella variicola


organism_name: Streptococcus salivarius


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Escherichia coli


organism_name: Enterobacter ludwigii


organism_name: Bifidobacterium longum


organism_name: Enterococcus casseliflavus


organism_name: Cutibacterium acnes


organism_name: Lactococcus lactis


organism_name: Aerococcus urinaeequi


organism_name: Enterococcus faecalis


organism_name: Streptococcus anginosus


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Coriobacteriaceae bacterium AM113-163


organism_name: Bifidobacterium adolescentis


organism_name: Lactococcus petauri


organism_name: Enterococcus lactis


organism_name: Staphylococcus aureus


organism_name: Eggerthella lenta


organism_name: Coriobacteriaceae bacterium AM113-129


organism_name: Acinetobacter guillouiae


organism_name: Enterobacter bugandensis


organism_name: Streptococcus salivarius


organism_name: Klebsiella variicola


organism_name: Escherichia coli


organism_name: Lactococcus lactis


organism_name: Enterococcus casseliflavus


organism_name: Coprococcus sp. AM11-30B


organism_name: Kosakonia cowanii


organism_name: Klebsiella pneumoniae


organism_name: Dorea longicatena


organism_name: Bifidobacterium adolescentis


organism_name: Ligilactobacillus salivarius


organism_name: Coriobacteriaceae bacterium AM110-91


organism_name: Megamonas funiformis


organism_name: Coriobacteriaceae bacterium AM110-84


organism_name: Streptococcus infantarius


organism_name: Coriobacteriaceae bacterium AM110-83


organism_name: Bifidobacterium longum


organism_name: Veillonellaceae bacterium AM110-75


organism_name: Enterococcus faecium


organism_name: Coriobacteriaceae bacterium AM110-72


organism_name: Mediterraneibacter faecis


organism_name: Coriobacteriaceae bacterium AM110-69


organism_name: Veillonellaceae bacterium AM110-64


organism_name: Ligilactobacillus agilis


organism_name: Escherichia coli


organism_name: Weissella confusa


organism_name: Bifidobacterium adolescentis


organism_name: Coriobacteriaceae bacterium AM110-36


organism_name: Bacteroidaceae bacterium AM110-24


organism_name: Megamonas funiformis


organism_name: Streptococcus salivarius


organism_name: Phocaeicola coprocola


organism_name: Streptococcus infantarius


organism_name: Veillonellaceae bacterium AM110-163


organism_name: Streptococcus macedonicus


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Enterococcus lactis


organism_name: Lactobacillus delbrueckii


organism_name: Bifidobacterium dentium


organism_name: Leuconostoc mesenteroides


organism_name: Lactiplantibacillus pentosus


organism_name: Acinetobacter johnsonii


organism_name: Acinetobacter guillouiae


organism_name: Pediococcus pentosaceus


organism_name: Enterococcus faecalis


organism_name: Terrisporobacter petrolearius


organism_name: Escherichia coli


organism_name: Limosilactobacillus mucosae


organism_name: Lactococcus lactis


organism_name: Leuconostoc citreum


organism_name: Bifidobacterium longum


organism_name: Clostridium perfringens


organism_name: Streptococcus infantarius


organism_name: Staphylococcus aureus


organism_name: Enterococcus lactis


organism_name: Bacillus cereus


organism_name: Coprobacillaceae bacterium UN01-12pH3A


organism_name: Citrobacter amalonaticus


organism_name: Thomasclavelia ramosa


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Pseudocoprococcus catus


organism_name: [Ruminococcus] lactaris


organism_name: Bacteroides fragilis


organism_name: Lactobacillus gasseri


organism_name: Bifidobacterium adolescentis


organism_name: Bacteroides thetaiotaomicron


organism_name: Alistipes finegoldii


organism_name: Adlercreutzia equolifaciens


organism_name: Lachnospiraceae bacterium TM12-19A


organism_name: Collinsella aerofaciens


organism_name: Bifidobacterium longum


organism_name: Bacteroides uniformis


organism_name: Staphylococcus aureus


organism_name: Lactococcus petauri


organism_name: Clostridium perfringens


organism_name: Gemmiger formicilis


organism_name: Enterococcus faecium


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Brandenburg


asm_submitter: Health Protection Agency

organism_name: Listeria monocytogenes


organism_name: Escherichia coli


organism_name: Enterococcus faecalis


organism_name: Weissella confusa


organism_name: Shigella flexneri


organism_name: Lactococcus garvieae


organism_name: Lactococcus formosensis


organism_name: Bacillus velezensis


organism_name: Enterococcus gallinarum


organism_name: Campylobacter coli


organism_name: Bifidobacterium longum


organism_name: Microbacterium algeriense


organism_name: Butyricicoccus sp. TM115-253


organism_name: Weissella cibaria


organism_name: Salmonella enterica


organism_name: Enterococcus faecium


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Enterococcus casseliflavus


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Enterococcus thailandicus


organism_name: Campylobacter jejuni


organism_name: Enterococcus faecalis


organism_name: Escherichia coli


organism_name: Staphylococcus aureus


organism_name: Enterococcus lactis


organism_name: Klebsiella pneumoniae


organism_name: Bifidobacterium adolescentis


organism_name: Butyricicoccus sp. TM115-194


organism_name: Bifidobacterium catenulatum


organism_name: Lactococcus petauri


organism_name: Coprococcus sp. TM115-187


organism_name: Collinsella aerofaciens


organism_name: Bifidobacterium longum


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Enterococcus faecium


organism_name: Gemmiger formicilis


organism_name: Coprococcus sp. TM115-141


organism_name: Vagococcus bubulae


organism_name: Faecalibacillus intestinalis


organism_name: Enterococcus gallinarum


organism_name: Enterococcus faecalis


organism_name: Weissella confusa


organism_name: Enterococcus lactis


organism_name: Escherichia coli


organism_name: Enterococcus casseliflavus


organism_name: Lactococcus lactis


organism_name: Microbacterium algeriense


organism_name: Bifidobacterium adolescentis


organism_name: Paraclostridium sordellii


organism_name: Bifidobacterium longum


organism_name: Lactococcus petauri


organism_name: Cutibacterium acnes


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Butyricimonas paravirosa


organism_name: Eisenbergiella porci


organism_name: Christensenella intestinihominis


organism_name: Eubacterium limosum


organism_name: Bacteroides intestinalis


organism_name: Lactobacillus crispatus


organism_name: Bacteroides bouchesdurhonensis


organism_name: Ligilactobacillus salivarius


organism_name: Oscillospiraceae bacterium AF70-11b3TA


organism_name: Butyricimonas virosa


organism_name: Flavonifractor plautii


organism_name: Ruminococcaceae bacterium AF68-02b2A


organism_name: Butyribacter intestini


organism_name: Butyricimonas synergistica


organism_name: Bacteroidaceae bacterium AF67-09pH10A


organism_name: Lactobacillus acidophilus


organism_name: Acidaminococcus hominis


organism_name: Agathobacter rectalis


organism_name: Lacticaseibacillus paracasei


organism_name: Faecalibacillus intestinalis


organism_name: Lachnospiraceae bacterium AF66-18pH10TA


organism_name: Parabacteroides johnsonii


organism_name: Longibaculum muris


organism_name: Lachnospiraceae bacterium AF66-15pH9A


organism_name: Caecibacter sp. AF67-8-b12A


organism_name: Lactobacillaceae bacterium AF64-9pH9TA


organism_name: Limosilactobacillus fermentum


organism_name: Enterobacter ludwigii


organism_name: Klebsiella pneumoniae


organism_name: Faecalitalea cylindroides


organism_name: Lachnospiraceae bacterium AF63-7pH9-A


organism_name: Mitsuokella jalaludinii


organism_name: Clostridium cochlearium


organism_name: Blautia massiliensis (ex Durand et al. 2017)


organism_name: Parabacteroides distasonis


organism_name: Limosilactobacillus portuensis


organism_name: Lactobacillus delbrueckii


organism_name: Lactobacillus paragasseri


organism_name: Ligilactobacillus salivarius


organism_name: Lactobacillus gasseri


organism_name: Blautia intestinalis


organism_name: Bacteroides ovatus


organism_name: Megamonas funiformis


organism_name: Lachnospiraceae bacterium AF58-9ACA


organism_name: Oliverpabstia intestinalis


organism_name: Atopobiaceae bacterium AF58-6pH5A


organism_name: Bifidobacterium longum


organism_name: Lachnospiraceae bacterium AF58-5ACA


organism_name: Clostridium fessum


organism_name: Citrobacter gillenii


organism_name: Lachnospiraceae bacterium AF58-1A


organism_name: Gemmiger formicilis


organism_name: Caecibacter sp. AF58-12pH5A


organism_name: Atopobiaceae bacterium AF58-11pH5A


organism_name: Cloacibacillus porcorum


organism_name: Enterococcus thailandicus


organism_name: Lachnospiraceae bacterium AF57-4ACA


organism_name: Parabacteroides distasonis


organism_name: Kluyvera ascorbata


organism_name: Bacteroides ovatus


organism_name: Phocaeicola plebeius


organism_name: Lachnospiraceae bacterium AF55-34A


organism_name: Lachnospiraceae bacterium AF55-34


organism_name: Lachnospiraceae bacterium AF55-24LNA


organism_name: Fusobacterium polymorphum


organism_name: Escherichia coli


organism_name: Enterococcus avium


organism_name: Veillonellaceae bacterium AF54-6pH5A


organism_name: Lachnospiraceae bacterium AF54-6pH10A


organism_name: Limosilactobacillus vaginalis


organism_name: Streptococcaceae bacterium AF54-32pH5A


organism_name: Firmicutes bacterium AF54-29pH10A


organism_name: Holdemanella biformis


organism_name: Muribaculaceae bacterium AF54-25pH10A


organism_name: Bacteroides uniformis


organism_name: Lactobacillus crispatus


organism_name: Megamonas funiformis


organism_name: Bacteroides finegoldii


organism_name: Bacteroidaceae bacterium AF54-19pH10A


organism_name: Bifidobacterium dentium


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Butyricimonas paravirosa


organism_name: Bifidobacterium animalis


organism_name: Alistipes communis


organism_name: Eisenbergiella tayi


organism_name: Ruminococcaceae bacterium AF52-21


organism_name: [Clostridium] leptum


organism_name: Lachnospiraceae bacterium AF52-12b2


organism_name: Lachnospiraceae bacterium AF51-6-b8A


organism_name: Lactobacillus johnsonii


organism_name: Bifidobacterium longum


organism_name: Lachnospiraceae bacterium AF51-7-b10A


organism_name: Lachnospiraceae bacterium AF51-3-b8A


organism_name: Lacticaseibacillus paracasei


organism_name: Prevotella denticola


organism_name: Bifidobacterium adolescentis


organism_name: Lachnospiraceae bacterium AF51-26b1


organism_name: Coprococcus sp. AF51-11b1


organism_name: Lachnospiraceae bacterium AF50-8-r


organism_name: Coriobacteriaceae bacterium AF49-36


organism_name: Faecalibacillus intestinalis


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Coriobacteriaceae bacterium AF45-21


organism_name: Segatella copri


organism_name: Coriobacteriaceae bacterium AF45-1


organism_name: Holdemanella porci


organism_name: Bacteroides zhangwenhongii


organism_name: Faecalibacillus faecis


organism_name: Erysipelotrichaceae bacterium AF42-20


organism_name: Coriobacteriaceae bacterium AF42-11BH


organism_name: Coriobacteriaceae bacterium AF41-2BH


organism_name: Oscillospiraceae bacterium AF41-15


organism_name: Bifidobacterium adolescentis


organism_name: Bacteroides thetaiotaomicron


organism_name: Coprobacillaceae bacterium AF38-13


organism_name: Oscillospiraceae bacterium AF37-13


organism_name: Oscillospiraceae bacterium AF41-14


organism_name: Clostridium fessum


organism_name: Streptococcus mutans


organism_name: Escherichia coli


organism_name: Phocaeicola vulgatus


organism_name: Coriobacteriaceae bacterium AF35-9AC


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Faecalibacterium prausnitzii


organism_name: Coriobacteriaceae bacterium AF35-10BH


organism_name: Bacteroides ovatus


organism_name: Collinsella intestinalis


organism_name: Lachnospiraceae bacterium AF34-2BH


organism_name: Oscillospiraceae bacterium AF34-14AC


organism_name: Bifidobacterium longum


organism_name: Ligilactobacillus ruminis


organism_name: Clostridiaceae bacterium AF34-11AC


organism_name: Bifidobacterium adolescentis


organism_name: Coriobacteriaceae bacterium AF31-11AC


organism_name: Bacteroides intestinalis


organism_name: Lactococcus petauri


organism_name: Bifidobacterium bifidum


organism_name: Paraprevotella clara


organism_name: Staphylococcus aureus


organism_name: Phocaeicola massiliensis


organism_name: Pseudocoprococcus catus


organism_name: Phocaeicola dorei


organism_name: Lachnospiraceae bacterium AF24-4LB


organism_name: Phocaeicola plebeius


organism_name: Megamonas funiformis


organism_name: Bacteroidaceae bacterium AF24-27AC


excluded_from_refseq: many frameshifted proteins


organism_name: Catenibacterium mitsuokai


organism_name: Bacteroides uniformis


organism_name: Lachnospiraceae bacterium AF22-4AC


organism_name: Collinsella tanakaei


organism_name: Bacteroides stercoris


organism_name: Selenomonadaceae bacterium AF21-22


organism_name: Enterococcus lactis


organism_name: Lachnospiraceae bacterium AF21-21


organism_name: Bifidobacterium longum


organism_name: Bacteroides caccae


organism_name: Staphylococcus aureus


organism_name: Butyricicoccus sp. AF18-9LB


organism_name: Parabacteroides distasonis


organism_name: Bacteroides cellulosilyticus


organism_name: Amedibacterium intestinale


organism_name: Bacteroides faecis


organism_name: Lachnospiraceae bacterium AF17-13


organism_name: Flavonifractor plautii


organism_name: Streptococcus anginosus


organism_name: Dialister histaminiformans


organism_name: Lactobacillus acidophilus


organism_name: Coriobacteriaceae bacterium AF16-32LBC


organism_name: Atopobiaceae bacterium AF16-3AC


organism_name: Paenibacillus macerans


organism_name: Atopobiaceae bacterium AF16-2LB


organism_name: Atopobiaceae bacterium AF16-26AC


organism_name: Atopobiaceae bacterium AF16-24AC


organism_name: Atopobiaceae bacterium AF16-23AC


organism_name: Atopobiaceae bacterium AF16-1AC


organism_name: Atopobiaceae bacterium AF16-16LB


organism_name: Atopobiaceae bacterium AF16-15LB


organism_name: Atopobiaceae bacterium AF16-13AC


organism_name: Atopobiaceae bacterium AF16-13LB


organism_name: Atopobiaceae bacterium AF16-12LB


organism_name: Ruminococcus bromii


organism_name: Atopobiaceae bacterium AF16-12AC


organism_name: [Eubacterium] siraeum


organism_name: Bifidobacterium longum


organism_name: Coriobacteriaceae bacterium AF15-23


organism_name: Bacteroides clarus


organism_name: Bacteroides xylanisolvens


organism_name: Butyricimonas paravirosa


organism_name: [Clostridium] innocuum


organism_name: Staphylococcus aureus


organism_name: Escherichia coli


organism_name: Lactobacillus gasseri


organism_name: Veillonella atypica


organism_name: Enterococcus faecalis


organism_name: Megasphaera sp. AF13-6AC


organism_name: Enterococcus asini


organism_name: Streptococcaceae bacterium AF13-5-6.0


organism_name: Clostridium butyricum


organism_name: Streptococcus pasteurianus


organism_name: Enterococcus raffinosus


organism_name: Bacillus licheniformis


organism_name: Holdemanella biformis


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Clostridium fessum


organism_name: Streptococcus salivarius


organism_name: Bifidobacterium bifidum


organism_name: Ligilactobacillus salivarius


organism_name: Lacticaseibacillus paracasei


organism_name: Streptococcus anginosus


organism_name: Enterococcus durans


organism_name: Enterococcus lactis


organism_name: Limosilactobacillus fermentum


organism_name: Clostridiaceae bacterium AF10-41


organism_name: Phocaeicola vulgatus


organism_name: Lachnospiraceae bacterium AF102-84


organism_name: Bacteroides uniformis


organism_name: Phocaeicola plebeius


organism_name: Phocaeicola coprocola


organism_name: Bifidobacterium adolescentis


organism_name: Coprococcus sp. AF102-57


organism_name: Phocaeicola massiliensis


organism_name: Parabacteroides merdae


organism_name: Streptococcaceae bacterium AF102-56


organism_name: Coriobacteriaceae bacterium AF102-49


organism_name: Streptococcus salivarius


organism_name: Parabacteroides distasonis


organism_name: Lachnospiraceae bacterium AF102-41


organism_name: Staphylococcus aureus


organism_name: Bacteroides stercoris


organism_name: Micrococcus luteus


organism_name: Escherichia coli


organism_name: Levilactobacillus brevis


organism_name: Lachnospiraceae bacterium AF10-20


organism_name: Streptococcus sanguinis


organism_name: Bifidobacterium longum


organism_name: Enterococcus faecalis


organism_name: Eggerthella lenta


organism_name: Holdemanella biformis


organism_name: Clostridium perfringens


organism_name: Coriobacteriaceae bacterium AF101-27


organism_name: Clostridium beijerinckii


organism_name: Citrobacter portucalensis


organism_name: Dorea amylophila


organism_name: Enterococcus lactis


organism_name: Enterococcus casseliflavus


organism_name: Staphylococcus aureus


organism_name: Enterococcus thailandicus


organism_name: Escherichia coli


organism_name: Lactococcus formosensis


organism_name: Sellimonas intestinalis


organism_name: Parabacteroides distasonis


organism_name: Coriobacteriaceae bacterium AF08-21


organism_name: Bacteroides uniformis


organism_name: Streptococcus anginosus


organism_name: [Clostridium] innocuum


organism_name: Paraclostridium bifermentans


organism_name: Phocaeicola vulgatus


organism_name: Enterococcus faecalis


organism_name: Streptococcus koreensis


organism_name: Streptococcaceae bacterium AF07-22B


organism_name: Klebsiella pneumoniae


organism_name: Oliverpabstia intestinalis


organism_name: Phocaeicola massiliensis


organism_name: Bacteroides stercoris


organism_name: Streptococcus gordonii


organism_name: Bifidobacterium bifidum


organism_name: Bifidobacterium longum


organism_name: Enterococcus lactis


organism_name: Bacteroides cellulosilyticus


organism_name: Dorea longicatena


organism_name: Coriobacteriaceae bacterium AF05-41


organism_name: Lactobacillus acidophilus


organism_name: Bacillus glycinifermentans


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Butyricicoccus sp. AF05-36


organism_name: Eubacterium sp. AF05-24


organism_name: Paraclostridium bifermentans


organism_name: Escherichia coli


organism_name: Bacillus sonorensis


organism_name: Bacteroides ovatus


organism_name: Oscillospiraceae bacterium AF04-41-1


organism_name: Phocaeicola massiliensis


organism_name: Bacteroides finegoldii


excluded_from_refseq: fragmented assembly

organism_name: Thomasclavelia ramosa


organism_name: Streptococcus pasteurianus


organism_name: Bacteroides uniformis


organism_name: Mediterraneibacter torques


organism_name: Staphylococcus aureus


organism_name: Bifidobacterium longum


organism_name: Lactococcus lactis


organism_name: Bacteroides xylanisolvens


organism_name: Lachnospiraceae bacterium AF02-47


organism_name: Bifidobacterium adolescentis


organism_name: Phocaeicola coprocola


organism_name: Bacteroides stercoris


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Klebsiella africana


organism_name: Lactococcus petauri


organism_name: Coriobacteriaceae bacterium AF01-38J


organism_name: Escherichia coli


organism_name: Bacteroides eggerthii


organism_name: Parabacteroides goldsteinii


organism_name: Bacteroides fragilis


organism_name: Lachnospiraceae bacterium AF75-08pH9A


excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Pediococcus pentosaceus


organism_name: Lachnospiraceae bacterium AF76-10pH9T


organism_name: Cloacibacillus evryensis


organism_name: Staphylococcus aureus


organism_name: Enterococcus avium


organism_name: Lachnospiraceae bacterium AF75-07pH9A


organism_name: Bacteroidaceae bacterium AF75-06pH9A


organism_name: Bifidobacterium adolescentis


organism_name: Bifidobacterium longum


organism_name: Bacillus subtilis


organism_name: Staphylococcus hominis


organism_name: Microbacterium algeriense


organism_name: Enterococcus faecalis


organism_name: Gemmiger qucibialis


organism_name: Lachnospiraceae bacterium TM11-1A


organism_name: Oscillospiraceae bacterium TM11-13A


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Bifidobacterium bifidum


organism_name: Ligilactobacillus ruminis


organism_name: Enterococcus faecium


organism_name: Bacteroides caccae


organism_name: Acidaminococcus intestini


organism_name: Coriobacteriaceae bacterium TM04-33


organism_name: Bilophila wadsworthia


organism_name: Lactobacillus acidophilus


organism_name: Bifidobacterium longum


organism_name: Coprobacter secundus


organism_name: Bacteroides fragilis


organism_name: Bacteroides ovatus


organism_name: Butyricimonas virosa


organism_name: Coriobacteriaceae bacterium TF12-33


organism_name: Bifidobacterium adolescentis


excluded_from_refseq: annotation fails completeness check

organism_name: Faecalibacillus intestinalis


organism_name: Enterococcus casseliflavus


organism_name: Enterococcus faecalis


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Bifidobacterium animalis


organism_name: Enterocloster aldenensis


organism_name: Peptoniphilus harei


organism_name: Lachnospiraceae bacterium TF08-3AC


organism_name: Coriobacteriaceae bacterium TF08-6AT


organism_name: Faecalibacterium prausnitzii


organism_name: Lactobacillus acidophilus


organism_name: Bariatricus sp. TF06-38A


organism_name: Atopobiaceae bacterium TF06-36A


organism_name: Coriobacteriaceae bacterium TF06-26


organism_name: Oliverpabstia intestinalis


organism_name: Klebsiella pneumoniae


organism_name: Bacteroides fragilis


organism_name: Escherichia coli


organism_name: Erysipelotrichaceae bacterium TF05-20AC


organism_name: Bifidobacterium bifidum


organism_name: Barnesiella intestinihominis


organism_name: Ruthenibacterium lactatiformans


organism_name: Parabacteroides distasonis


organism_name: Enterococcus faecalis


organism_name: Cutibacterium avidum


organism_name: [Clostridium] innocuum


organism_name: Enterococcus gallinarum


organism_name: Bifidobacterium longum


organism_name: Bacteroides thetaiotaomicron


organism_name: Enterococcus lactis


organism_name: Bacteroides uniformis


organism_name: Streptococcus halitosis


organism_name: Enterococcus avium


organism_name: Staphylococcus aureus


organism_name: Coprobacillaceae bacterium OM17-2MHA


organism_name: Escherichia coli


organism_name: Limosilactobacillus mucosae


organism_name: Lactobacillus amylovorus


organism_name: Enterobacter roggenkampii


organism_name: Lachnospiraceae bacterium OM15-82A


organism_name: Bifidobacterium bifidum


organism_name: Lachnospiraceae bacterium OM14-6A


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Paraprevotella clara


organism_name: Klebsiella pneumoniae


organism_name: Enterococcus diestrammenae


organism_name: [Clostridium] symbiosum


organism_name: Ligilactobacillus salivarius


organism_name: Candidatus Collinsella stercoripullorum


organism_name: Faecalibacillus intestinalis


organism_name: Bifidobacterium dentium


organism_name: Megamonas funiformis


organism_name: Lactiplantibacillus plantarum


organism_name: Bacteroidaceae bacterium OM08-32


organism_name: Pseudoruminococcus massiliensis


organism_name: Faecalibacillus faecis


organism_name: Bacteroides fragilis


organism_name: Coriobacteriaceae bacterium OM04-12


organism_name: Anaerostipes caccae


organism_name: Ligilactobacillus ruminis


organism_name: Faecalimonas umbilicata


organism_name: Enterococcus faecalis


organism_name: Bacillus smithii


organism_name: Fusobacteriaceae bacterium OF49-07CM05A


organism_name: Escherichia coli


organism_name: Gemmiger qucibialis


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Coriobacteriaceae bacterium OM03-11AC


organism_name: Fusobacterium hominis


organism_name: Ligilactobacillus salivarius


organism_name: Caldibacillus thermoamylovorans


organism_name: Levilactobacillus brevis


organism_name: Leuconostoc lactis


organism_name: Weissella viridescens


organism_name: Lacticaseibacillus paracasei


organism_name: Proteus mirabilis


organism_name: Lacticaseibacillus rhamnosus


organism_name: Faecalimonas umbilicata


organism_name: Clostridiaceae bacterium OF42-15pH9A


organism_name: Enterococcaceae bacterium OF42-14pH9A


organism_name: Lachnospiraceae bacterium OF42-13pH9A


organism_name: Lachnospiraceae bacterium OF40-10pH9A


organism_name: Bacteroides ovatus


organism_name: Limosilactobacillus oris


organism_name: Eubacterium callanderi


organism_name: Lactobacillus acidophilus


organism_name: Faecalicoccus pleomorphus


organism_name: Streptococcus anginosus


organism_name: Longibaculum muris


organism_name: Bifidobacterium longum


organism_name: Merdimonas faecis


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Enterobacter roggenkampii


organism_name: Butyricicoccus sp. OF30-11pH9A


organism_name: Lachnospiraceae bacterium OF30-10pH10A


organism_name: Enterococcus lactis


organism_name: Parabacteroides merdae


organism_name: Bacteroides thetaiotaomicron


organism_name: Butyricimonas faecihominis


organism_name: Parabacteroides distasonis


organism_name: Lactiplantibacillus plantarum


organism_name: Streptococcaceae bacterium OF28-12pH9A


organism_name: Lachnospiraceae bacterium OF27-8pH10A


organism_name: Lachnospiraceae bacterium OF27-8pH9A


organism_name: Bacteroides ovatus


organism_name: Butyricicoccus sp. OF27-2pH9A


organism_name: Rikenellaceae bacterium OF27-16pH9A


organism_name: Lachnospiraceae bacterium OF27-16pH10A


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Staphylococcus aureus


organism_name: Lachnospiraceae bacterium OF27-10pH9A


organism_name: Bacteroides intestinalis


organism_name: Limosilactobacillus mucosae


organism_name: Atopobiaceae bacterium OF26-3pH10A


organism_name: Bifidobacterium bifidum


organism_name: Lacticaseibacillus paracasei


organism_name: Lachnospiraceae bacterium OF25-8pH10A


organism_name: Phocaeicola plebeius


organism_name: Parabacteroides merdae


organism_name: Bifidobacterium longum


organism_name: Parabacteroides distasonis


organism_name: Megamonas funiformis


organism_name: Enterococcus avium


organism_name: Lachnospiraceae bacterium OF24-11pH9A


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Bacteroides ovatus


organism_name: Enterococcus thailandicus


organism_name: Enterococcus malodoratus


organism_name: Staphylococcus aureus


organism_name: Pediococcus pentosaceus


organism_name: Clostridium baratii


organism_name: Enterococcus lactis


organism_name: Bacillaceae bacterium OF18-1A


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Intestinibacter bartlettii


organism_name: Lachnospiraceae bacterium OF15-11BHA


organism_name: Streptococcus sanguinis


organism_name: Varibaculum timonense


organism_name: Lachnospiraceae bacterium OF14-2A


organism_name: Enterococcus faecalis


organism_name: Lachnospiraceae bacterium OF14-22SRA


organism_name: Pauljensenia sp. OF14-1SRA


organism_name: Lachnospiraceae bacterium OF12-5


organism_name: Limosilactobacillus mucosae


organism_name: Enterobacter bugandensis


organism_name: Staphylococcus aureus


excluded_from_refseq: fragmented assembly; genus undefined

organism_name: Lachnospiraceae bacterium OF09-6XD


organism_name: Faecalibacillus faecis


organism_name: Bifidobacterium longum


organism_name: Bacteroides ovatus


organism_name: Akkermansia muciniphila


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Citrobacter freundii


organism_name: Lactococcus petauri


organism_name: Bacteroides xylanisolvens


organism_name: Anaerostipes hominis (ex Lee et al. 2021)


organism_name: Escherichia coli


organism_name: Bifidobacterium adolescentis


organism_name: Ruthenibacterium lactatiformans


organism_name: Coprobacillus cateniformis


organism_name: Paeniclostridium hominis


organism_name: Paraclostridium sordellii


organism_name: Staphylococcus aureus


organism_name: Phocaeicola vulgatus


organism_name: Bacillus mobilis


organism_name: Lactobacillus crispatus


organism_name: Ligilactobacillus salivarius


organism_name: Coriobacteriaceae bacterium LG55-24


organism_name: Holdemanella biformis


organism_name: Coriobacteriaceae bacterium LG101-28


organism_name: Coprococcus sp. LG101-27


organism_name: Dorea amylophila


organism_name: Bacteroides xylanisolvens


organism_name: Escherichia coli


organism_name: Lachnospiraceae bacterium LG101-08


organism_name: Thomasclavelia ramosa


organism_name: Clostridium perfringens


organism_name: [Clostridium] innocuum


organism_name: Coprococcus sp. LG100-32


organism_name: Blautia massiliensis (ex Durand et al. 2017)


organism_name: Staphylococcus aureus


organism_name: Bifidobacterium longum


organism_name: Clostridioides difficile


organism_name: Hungatella effluvii


organism_name: Lachnospiraceae bacterium IF03-09b2A


organism_name: Lachnospiraceae bacterium IF01-08pH9TA


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Parabacteroides distasonis


organism_name: Enterococcus avium


organism_name: Phocaeicola vulgatus


organism_name: Bacteroides faecis


organism_name: Phocaeicola plebeius


organism_name: Faecalibacterium prausnitzii


organism_name: Longicatena caecimuris


organism_name: Bifidobacterium breve


organism_name: Segatella buccae


organism_name: Limosilactobacillus fermentum


organism_name: Leclercia adecarboxylata


organism_name: Staphylococcus aureus


organism_name: Cutibacterium avidum


organism_name: Lachnospiraceae bacterium CF03-11TA


organism_name: Intestinimonas butyriciproducens


organism_name: Hungatella effluvii


organism_name: Blautia massiliensis (ex Durand et al. 2017)


organism_name: Eggerthella lenta


organism_name: Faecalibacillus intestinalis


organism_name: Streptococcus pasteurianus


organism_name: Lachnospiraceae bacterium AM97-61


organism_name: Lachnospiraceae bacterium AM97-56


organism_name: Mediterraneibacter gnavus


organism_name: Holdemanella biformis


organism_name: Lachnospiraceae bacterium AM97-28


organism_name: Coprococcus sp. AM97-35


organism_name: Agathobacter rectalis


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Megamonas funiformis


organism_name: Coprococcus sp. AM97-06


organism_name: Lachnospiraceae bacterium AM97-05


organism_name: Faecalimonas umbilicata


organism_name: Enterococcus asini


organism_name: Ligilactobacillus acidipiscis


organism_name: Enterococcus raffinosus


organism_name: Lactobacillus amylovorus


organism_name: Bifidobacterium longum


organism_name: Enterococcus casseliflavus


organism_name: Limosilactobacillus mucosae


organism_name: Enterococcus faecalis


organism_name: Lachnospiraceae bacterium AM94-10pH9A


organism_name: Bifidobacterium dentium


organism_name: Lactiplantibacillus plantarum


organism_name: Lachnospiraceae bacterium AM93-12TA


organism_name: Phocaeicola dorei


organism_name: Levilactobacillus brevis


organism_name: Ligilactobacillus salivarius


organism_name: Streptococcus anginosus


organism_name: Fusobacteriaceae bacterium AM92-04CMCA


organism_name: Staphylococcus aureus


organism_name: Bacteroidaceae bacterium AM92-02GAA


organism_name: Ligilactobacillus acidipiscis


organism_name: Anaerococcus vaginalis


organism_name: Bifidobacterium longum


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Ligilactobacillus ruminis


organism_name: Enterococcus faecalis


organism_name: Lachnospiraceae bacterium AM90-07pH9A


organism_name: Lachnospiraceae bacterium AM90-07GAA


organism_name: Lactiplantibacillus plantarum


organism_name: Clostridium fessum


organism_name: Phocaeicola coprophilus


organism_name: Hoskinsella hominis


organism_name: Bifidobacterium adolescentis


organism_name: Levilactobacillus brevis


organism_name: Lachnospiraceae bacterium AM88-24TA


organism_name: Staphylococcus aureus


organism_name: Coprobacter fastidiosus


asm_submitter: IZSVe

organism_name: Salmonella enterica subsp. enterica serovar Bispebjerg


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Amager


organism_name: Escherichia coli


organism_name: Salmonella enterica


organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


asm_submitter: Vestfold Hospital Trust

organism_name: Bacteroides hominis


asm_submitter: Soochow University

organism_name: Aeromonas sp. D3


organism_name: Aeromonas sp. QDB01


organism_name: Aeromonas sp. QDB04


organism_name: Aeromonas sp. QDB05


organism_name: Aeromonas sp. QDB06


organism_name: Aeromonas sp. QDB10


organism_name: Aeromonas sp. QDB12


organism_name: Aeromonas sp. QDB11


organism_name: Aeromonas sp. QDB13


organism_name: Aeromonas sp. QDB17


organism_name: Aeromonas sp. QDB18


organism_name: Aeromonas sp. QDB21


organism_name: Aeromonas sp. QDB33


organism_name: Aeromonas sp. QDB36


organism_name: Aeromonas sp. QDB34


organism_name: Aeromonas sp. QDB41


organism_name: Aeromonas sp. QDB48


organism_name: Aeromonas sp. QDB50


organism_name: Aeromonas sp. QDB53


organism_name: Aeromonas sp. QDB56


organism_name: Staphylococcus aureus


organism_name: Aeromonas sp. QDB58


organism_name: Aeromonas sp. QDB59


organism_name: Aeromonas sp. QDB02


organism_name: Aeromonas sp. QDB61


organism_name: Aeromonas sp. QDB08


organism_name: Aeromonas sp. QDB62


organism_name: Aeromonas sp. QDB64


organism_name: Aeromonas sp. QDB67


organism_name: Aeromonas sp. S41-2


organism_name: Aeromonas sp. Y293-4


organism_name: Aeromonas sp. Y289-2


organism_name: Aeromonas sp. Y301-2


organism_name: Aeromonas sp. Y307-3


organism_name: Aeromonas sp. Y311-2


organism_name: Aeromonas sp. Y318-1


asm_submitter: Third Institute of Oceanography, Ministry of Natural Resources of PR China

organism_name: Bacillus changyiensis


organism_name: Staphylococcus aureus


organism_name: Aeromonas sp. Y318-3


asm_submitter: I.N.Blokhina Research Institute of Epidemiology and Microbiology


asm_submitter: Academician I.N.Blokhina Nizhny Novgorod Scientific Research Institute of Epidemiology and Micr


asm_submitter: Universidad Complutense de Madrid

organism_name: Escherichia coli


asm_submitter: Kasetsart University

organism_name: Nocardiopsis endophytica


organism_name: Nocardiopsis suaedae


asm_submitter: Hellenic Agricultural Organization - DIMITRA

organism_name: Lactococcus lactis


asm_submitter: Phenikaa University

organism_name: Mycolicibacterium sp. BiH015


organism_name: Lactococcus cremoris


asm_submitter: University of Bergen

organism_name: Streptococcus pneumoniae


organism_name: Aeromonas sp. QDB69


organism_name: Aeromonas sp. QDB54


organism_name: Aeromonas sp. QDB68


organism_name: Aeromonas sp. QDB63


organism_name: Aeromonas sp. QDB66


organism_name: Aeromonas sp. QDB51


organism_name: Aeromonas sp. QDB39


organism_name: Aeromonas sp. QDB31


organism_name: Aeromonas sp. QDB37


organism_name: Aeromonas sp. QDB30


asm_submitter: National Center for Biotechnology Information

organism_name: Staphylococcus aureus


organism_name: Aeromonas sp. QDB25


organism_name: Aeromonas sp. QDB23


organism_name: Aeromonas sp. QDB22


organism_name: Aeromonas sp. QDB20


organism_name: Aeromonas sp. QDB14


organism_name: Aeromonas sp. QDB07


organism_name: Aeromonas sp. QDB03


asm_submitter: Universiteit Gent

organism_name: Brachyspira hyodysenteriae


organism_name: Aeromonas sp. QDB09


asm_submitter: City University of Hong Kong Shenzhen Research Institute

organism_name: Bacillus cereus group sp. TH41-1LC


organism_name: Bacillus cereus group sp. TH40LC


organism_name: Bacillus cereus group sp. TH36-2LC


organism_name: Bacillus cereus group sp. TH43LC


excluded_from_refseq: unverified source organism; from large multi-isolate project

organism_name: Bacillus cereus


organism_name: Bacillus cereus group sp. TH260-2LC


organism_name: Bacillus cereus group sp. TH254-2LC


organism_name: Staphylococcus aureus


organism_name: Bacillus cereus group sp. TH253LC


organism_name: Bacillus cereus group sp. TH244-1LC


organism_name: Bacillus cereus group sp. TH242-3LC


organism_name: Bacillus cereus group sp. TH243-3LC


organism_name: Bacillus cereus group sp. TH243-1LC


organism_name: Bacillus cereus group sp. TH230-1LC


organism_name: Bacillus cereus group sp. TH228LC


organism_name: Bacillus cereus group sp. TH225LC


organism_name: Bacillus cereus group sp. TH217LC


organism_name: Bacillus cereus group sp. TH204-1LC


organism_name: Bacillus cereus group sp. TH208-1LC


organism_name: Bacillus cereus group sp. TH206-1LC


organism_name: Bacillus cereus group sp. TH177-1LC


organism_name: Bacillus cereus group sp. TH172LC


organism_name: Bacillus cereus group sp. TH163-1LC


organism_name: Bacillus cereus group sp. TH153LC


organism_name: Staphylococcus aureus


organism_name: Bacillus cereus group sp. TH160LC


organism_name: Bacillus cereus


organism_name: Bacillus cereus group sp. TH152-1LC


organism_name: Bacillus cereus group sp. TH150LC


organism_name: Bacillus cereus group sp. m2-68


organism_name: Bacillus cereus group sp. TH147LC


organism_name: Bacillus cereus group sp. m2-21


organism_name: Bacillus cereus group sp. m2-12


organism_name: Bacillus cereus group sp. m1-4


organism_name: Bacillus cereus group sp. m1-22


organism_name: Bacillus cereus group sp. m1-21


organism_name: Bacillus cereus group sp. m1-2


organism_name: Bacillus cereus group sp. m1-16


organism_name: Bacillus cereus group sp. m1-11


organism_name: Bacillus cereus group sp. m1-1


organism_name: Bacillus cereus group sp. LD113LC


organism_name: Staphylococcus aureus


organism_name: Bacillus cereus group sp. LD121LC


organism_name: Bacillus cereus


organism_name: Bacillus cereus group sp. BY9-3LC


organism_name: Bacillus cereus group sp. BY6-1LC


organism_name: Bacillus cereus group sp. BY8-1LC


organism_name: Bacillus cereus group sp. BY5-1LC


organism_name: Bacillus cereus group sp. BY25LC


organism_name: Bacillus cereus group sp. BY2-1LC


organism_name: Bacillus cereus group sp. BY17LC


organism_name: Bacillus cereus group sp. BY128LC


organism_name: Bacillus cereus group sp. BY122LC


organism_name: Bacillus cereus group sp. BY112LC


organism_name: Bacillus cereus group sp. BY11-1LC


organism_name: Bacillus cereus group sp. BY105LC


organism_name: Bacillus cereus group sp. BY10-2LC


organism_name: Bacillus cereus group sp. BcHK28


organism_name: Staphylococcus aureus


organism_name: Bacillus cereus group sp. BY32LC


organism_name: Bacillus cereus


organism_name: Bacillus cereus group sp. BcHK20


organism_name: Bacillus cereus group sp. BY142LC


organism_name: Bacillus cereus group sp. BcHK140


organism_name: Bacillus cereus group sp. BcHK130


organism_name: Bacillus cereus group sp. BcHK124


organism_name: Bacillus cereus group sp. BcHK114


organism_name: Bacillus cereus group sp. BcHK10


organism_name: Bacillus cereus group sp. BcHK104


organism_name: Bacillus cereus group sp. Bcc13


organism_name: Bacillus cereus group sp. Bcc09


organism_name: Bacillus cereus group sp. Bcc03


organism_name: Bacillus cereus group sp. Bcc02


organism_name: Bacillus cereus group sp. Bc253


organism_name: Bacillus cereus group sp. Bc256


organism_name: Bacillus cereus group sp. Bc252


organism_name: Bacillus cereus group sp. Bc238


organism_name: Bacillus cereus group sp. Bc237


organism_name: Bacillus cereus


organism_name: Bacillus cereus group sp. Bc247


organism_name: Bacillus cereus group sp. Bc248


organism_name: Staphylococcus aureus


organism_name: Bacillus cereus group sp. Bc228


organism_name: Bacillus cereus group sp. Bc227


organism_name: Bacillus cereus group sp. Bc222


organism_name: Bacillus cereus group sp. Bc200


organism_name: Bacillus cereus group sp. Bc191


organism_name: Bacillus cereus group sp. Bc177


organism_name: Bacillus cereus group sp. Bc065


organism_name: Bacillus cereus group sp. Bc062


organism_name: Bacillus cereus group sp. Bc061


organism_name: Bacillus cereus group sp. Bc032


organism_name: Bacillus cereus group sp. Bc030


organism_name: Bacillus cereus group sp. Bc031


organism_name: Bacillus cereus group sp. Bc029


organism_name: Bacillus cereus


organism_name: Bacillus cereus group sp. Bc025


organism_name: Bacillus cereus group sp. Bc011


organism_name: Staphylococcus aureus


organism_name: Bacillus cereus group sp. Bc015


organism_name: Bacillus cereus group sp. Bc010


organism_name: Bacillus cereus group sp. Bc009


organism_name: Bacillus cereus group sp. Bc007


organism_name: Bacillus cereus group sp. Bc008


organism_name: Bacillus cereus group sp. Bc005


asm_submitter: BGI-Shenzhen

organism_name: Longicatena caecimuris


organism_name: Bacillus cereus group sp. Bc002


asm_submitter: Jawaharlal Institute of Postgraduate Medical Education and Research


organism_name: Bacteroides ovatus


asm_submitter: School of Pharmaceutical Sciences of Ribeirao Preto - University of Sao Paulo

organism_name: Klebsiella pneumoniae


asm_submitter: Bigelow Laboratory For Ocean Sciences

excluded_from_refseq: derived from single cell; genus undefined


organism_name: Acidobacteriia bacterium AH_259_A11_L15


asm_name: WGA-X

organism_name: Nitrospinae bacterium AH-259-F20


organism_name: Acidobacteria bacterium AH-259-A15


organism_name: Acidobacteria bacterium AH-259-D05


organism_name: Acidobacteria bacterium AH-259-O06


organism_name: Acidobacteria bacterium AH-259-L09


organism_name: Staphylococcus aureus


organism_name: Acidobacteria bacterium AH-259-G07


organism_name: Patescibacteria group bacterium AH-259-L05


organism_name: Patescibacteria group bacterium AH-259-L07


asm_submitter: Alex Ekwueme Federal University

infraspecific_name: strain=EBU

organism_name: Enterobacter cloacae


asm_submitter: Korea Institute of Ceramic Engineering & Technology

organism_name: Bacillus sp. KICET-1


organism_name: Bifidobacterium longum


organism_name: Streptococcus anginosus


organism_name: Lactococcus petauri


organism_name: Phocaeicola vulgatus


organism_name: Mediterraneibacter torques


organism_name: Bacteroides stercoris


organism_name: Bacteroides ovatus


organism_name: Proteus mirabilis


organism_name: Escherichia fergusonii


organism_name: Escherichia coli


organism_name: Enterococcus faecalis


organism_name: Klebsiella variicola


organism_name: Staphylococcus aureus


organism_name: Klebsiella pneumoniae


organism_name: Coriobacteriaceae bacterium AM109-94


organism_name: Massilioclostridium coli


organism_name: Streptococcus constellatus


organism_name: Weissella cibaria


organism_name: Clostridium fessum


organism_name: Enterococcus lactis


organism_name: Weissella confusa


organism_name: Streptococcus infantarius


organism_name: Ligilactobacillus agilis


organism_name: Leuconostoc mesenteroides


organism_name: Bifidobacterium bifidum


asm_submitter: Unidad de Investigacion en Biomedicina Zurita&Zurita Laboratorios

excluded_from_refseq: unverified source organism

organism_name: Bacteroides fragilis


organism_name: Clostridioides difficile


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Escherichia coli


asm_submitter: FDA

organism_name: Campylobacter jejuni


asm_submitter: CDC

organism_name: Shigella flexneri


organism_name: Klebsiella pneumoniae


organism_name: Shigella sonnei


organism_name: Morganella morganii


asm_submitter: University of Tehran

excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Actinomycetota bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined


excluded_from_refseq: contaminated; derived from metagenome; genus undefined


organism_name: Staphylococcus aureus


asm_submitter: University of Veterinary Medicine Vienna

infraspecific_name: strain=JMF_11 EL3

organism_name: Campylobacter sp. JMF_11 EL3


infraspecific_name: strain=JMF_05 ED3

organism_name: Campylobacter sp. JMF_05 ED3


infraspecific_name: strain=JMF_07 ED4

organism_name: Campylobacter sp. JMF_07 ED4


infraspecific_name: strain=VBCF_03 NA9

organism_name: Campylobacter sp. VBCF_03 NA9


infraspecific_name: strain=JMF_09 ED2

organism_name: Campylobacter sp. JMF_09 ED2


infraspecific_name: strain=VBCF_07 NA4

organism_name: Campylobacter sp. VBCF_07 NA4


infraspecific_name: strain=VBCF_08 NA3

organism_name: Campylobacter sp. VBCF_08 NA3


infraspecific_name: strain=VBCF_02 NA5

organism_name: Campylobacter sp. VBCF_02 NA5


infraspecific_name: strain=JMF_01 NE2

organism_name: Campylobacter sp. JMF_01 NE2


infraspecific_name: strain=VBCF_04 NA7

organism_name: Campylobacter sp. VBCF_04 NA7


infraspecific_name: strain=JMF_03 NE3

organism_name: Campylobacter sp. JMF_03 NE3


infraspecific_name: strain=VBCF_05 NA6

organism_name: Campylobacter sp. VBCF_05 NA6


infraspecific_name: strain=JMF_10 EL2

organism_name: Campylobacter sp. JMF_10 EL2


infraspecific_name: strain=JMF_14 EL1

organism_name: Campylobacter sp. JMF_14 EL1


infraspecific_name: strain=JMF_02 ED1

organism_name: Campylobacter sp. JMF_02 ED1


infraspecific_name: strain=JMF_15 NE4

organism_name: Campylobacter sp. JMF_15 NE4


infraspecific_name: strain=JMF_04 NA10

organism_name: Campylobacter sp. JMF_04 NA10


organism_name: Staphylococcus aureus


organism_name: Escherichia coli


infraspecific_name: strain=JMF_06 NA1

organism_name: Campylobacter sp. JMF_06 NA1


infraspecific_name: strain=VBCF_06 NA8

organism_name: Campylobacter sp. VBCF_06 NA8


infraspecific_name: strain=Cn NA1

organism_name: Campylobacter sp. CN_NA1


infraspecific_name: strain=JMF_08 NE1

organism_name: Campylobacter sp. JMF_08 NE1


infraspecific_name: strain=Cn NE3

organism_name: Campylobacter sp. CN_NE3


infraspecific_name: strain=Cn NE4

organism_name: Campylobacter sp. CN_NE4


infraspecific_name: strain=Cn NE1

organism_name: Campylobacter sp. CN_NE1


infraspecific_name: strain=Cn EL2

organism_name: Campylobacter sp. CN_EL2


infraspecific_name: strain=Cn EL1

organism_name: Campylobacter sp. CN_EL1


organism_name: Clostridioides difficile


infraspecific_name: strain=Cs ED2

organism_name: Campylobacter sp. CS_ED2


infraspecific_name: strain=Cs NA1

organism_name: Campylobacter sp. CS_NA1


infraspecific_name: strain=Cs ED1

organism_name: Campylobacter sp. CS_ED1


infraspecific_name: strain=Cs NA2

organism_name: Campylobacter sp. CS_NA2


infraspecific_name: strain=Cn NA2

organism_name: Campylobacter sp. CN_NA2


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica


asm_submitter: Washington State Department of Health Public Health Laboratory


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Shigella flexneri


asm_submitter: National Center for Biotechnology Information

organism_name: Staphylococcus aureus


organism_name: Escherichia coli


organism_name: Shigella sonnei


asm_submitter: Center for Food Safety and Applied Nutrition


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Berta


organism_name: Salmonella enterica subsp. enterica serovar Uganda


asm_submitter: The University of Tennessee

organism_name: Staphylococcus pseudintermedius


organism_name: Salmonella enterica subsp. enterica serovar Worthington


organism_name: Salmonella enterica subsp. enterica serovar Altona


organism_name: Salmonella enterica subsp. enterica serovar Derby


asm_submitter: Centers for Disease Control and Prevention


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Clostridioides difficile


infraspecific_name: strain=C.difficile 4196-1


infraspecific_name: strain=C.difficile 1675-1


organism_name: Klebsiella variicola


organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Staphylococcus aureus


organism_name: Salmonella enterica subsp. enterica serovar Muenster


isolate: patient isolate

organism_name: Acinetobacter baumannii


asm_submitter: Bangladesh Agricultural University (BAU)

organism_name: Escherichia coli


isolate: rat

organism_name: Enterobacter hormaechei subsp. xiangfangensis


isolate: clinical patient

organism_name: Enterobacter hormaechei


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Vibrio parahaemolyticus


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


isolate: microbial 75


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Shigella flexneri


organism_name: Enterobacter hormaechei subsp. hoffmannii


organism_name: Salmonella enterica


asm_submitter: Inner Mongolia University

organism_name: Paenibacillus aestuarii


organism_name: Serratia marcescens


organism_name: Enterococcus faecium


organism_name: Staphylococcus aureus


isolate: Patient A

organism_name: Klebsiella pneumoniae


isolate: Patient B


isolate: Patient D


isolate: Patient F


asm_submitter: Health Protection Agency

organism_name: Escherichia coli


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Meleagridis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Reading


organism_name: Listeria monocytogenes


organism_name: Campylobacter jejuni


organism_name: Staphylococcus pseudintermedius


organism_name: Salmonella enterica


organism_name: Klebsiella aerogenes


infraspecific_name: strain=VBCF_01 NA2

organism_name: Campylobacter sp. VBCF_01 NA2


infraspecific_name: strain=Cn NE2

organism_name: Campylobacter sp. CN_NE2


infraspecific_name: strain=Cs NA3

organism_name: Campylobacter sp. CS_NA3


organism_name: Staphylococcus aureus


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Cubana


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Worthington


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar Muenster


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Staphylococcus aureus


infraspecific_name: strain=C6706 Para-thiI truB parental

organism_name: Vibrio cholerae


infraspecific_name: strain=C6706 Para-thiI truB suppressor #1


infraspecific_name: strain=C6706 Para-thiI truB suppressor #2


infraspecific_name: strain=ZCholO

isolate: Clinical


infraspecific_name: strain=K. ascorbata 68

organism_name: Kluyvera ascorbata


organism_name: Citrobacter freundii


infraspecific_name: strain=K. ascorbata 58


infraspecific_name: strain=ZCholI


infraspecific_name: strain=ZTox


infraspecific_name: strain=K. cryocrescens 4701

organism_name: Kluyvera cryocrescens


infraspecific_name: strain=K. cryocrescen 1919


infraspecific_name: strain=K. georgiana 14751

organism_name: Kluyvera georgiana


infraspecific_name: strain=K. ascorbata 220


infraspecific_name: strain=K. ascorbata 711


infraspecific_name: strain=K. ascorbata 3162


infraspecific_name: strain=K. ascorbata 280


infraspecific_name: strain=K. ascorbata 4663


infraspecific_name: strain=K. acorbata 8633


infraspecific_name: strain=strain ctma-1441


organism_name: Klebsiella oxytoca


organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


organism_name: Listeria monocytogenes


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: University of California Berkeley

organism_name: Pedococcus sp. 5OH_020


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Staphylococcus aureus


organism_name: Proteus mirabilis


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Staphylococcus pseudintermedius


isolate: Vibrio Cholera

organism_name: Vibrio cholerae


organism_name: Klebsiella pneumoniae


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


asm_submitter: FDA Center for Food Safety and Applied Nutrition

organism_name: Salmonella enterica subsp. enterica


organism_name: Listeria monocytogenes


organism_name: Campylobacter coli


asm_submitter: CDC

organism_name: Shigella sonnei


organism_name: Acinetobacter baumannii


organism_name: Campylobacter jejuni


asm_submitter: FDA/CFSAN


asm_submitter: US Food and Drug Administration


organism_name: Shigella flexneri


organism_name: Salmonella enterica


organism_name: Enterococcus faecalis


organism_name: Escherichia coli


organism_name: Campylobacter lari


organism_name: Staphylococcus aureus


asm_submitter: USDA FSIS


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Berta


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Enterococcus faecium


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul


organism_name: Acinetobacter nosocomialis


asm_submitter: northeast agricultural university

organism_name: Aliibacillus thermotolerans


asm_submitter: Jahangirnagar University

infraspecific_name: strain=FRCl

organism_name: Atlantibacter subterraneus


asm_submitter: Plant and Food Research

organism_name: Pseudomonas syringae


asm_submitter: University of Bern

organism_name: Klebsiella pneumoniae


asm_submitter: Institute of Military Veterinary Science, the Academy of Military Medical Sciences

organism_name: Vibrio metschnikovii


asm_submitter: Equipe MALIM Matrices ALImentaires et Microbiotes

infraspecific_name: strain=UCMA 4100

organism_name: Leucobacter sp. UCMA 4100


asm_submitter: Prince of Songkla University

organism_name: Vibrio parahaemolyticus


asm_submitter: National Chung Cheng University

infraspecific_name: strain=Yasuo


infraspecific_name: strain=Sylas


asm_submitter: Meeske Lab - University of Washington

organism_name: Listeria innocua


organism_name: Listeria welshimeri


asm_submitter: Central Disease Investigation Laboratory (CDIL)

organism_name: Citrobacter freundii


asm_submitter: China Agricultural University

organism_name: Allofournierella sp. CML151


organism_name: Bacteroides xylanisolvens


infraspecific_name: strain=CML 137

organism_name: Romboutsia lituseburensis


asm_submitter: Xiangya hospital, Central South University


asm_submitter: aphp

organism_name: Staphylococcus saprophyticus


asm_submitter: Institute of Deep-sea Science and Engine

organism_name: Parasedimentitalea psychrophila


asm_submitter: Fujian Agriculture and Forestry University

organism_name: Escherichia coli