annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: National Center for Biotechnology Information

assembly_level: Contig

assembly_type: haploid

excluded_from_refseq: from large multi-isolate project

genome_rep: Full

group: bacteria

organism_name: Escherichia coli

release_type: Major

version_status: latest


isolate: Escherichia coli


organism_name: Staphylococcus aureus


asm_submitter: University of Waterloo

assembly_level: Scaffold

excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Bacilli bacterium


asm_submitter: Agriculture and Agri-Food Canada

organism_name: Lachnospiraceae bacterium


organism_name: Bacillota bacterium


organism_name: Christensenellaceae bacterium


organism_name: Bacteroidales bacterium


asm_submitter: Tabriz University, Tabriz, Iran

excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Candidatus Blochmannia sp. A2


organism_name: Buchnera aphidicola


organism_name: Oscillospiraceae bacterium


organism_name: Eubacteriales bacterium


excluded_from_refseq: contaminated; derived from metagenome; genome length too small

organism_name: Pseudocoprococcus catus


excluded_from_refseq: derived from metagenome

organism_name: Butyrivibrio sp.


organism_name: Lentisphaeria bacterium


organism_name: bacterium


organism_name: Clostridia bacterium


organism_name: Clostridium sp.


organism_name: Succinatimonas hippei


asm_submitter: AWKUM

organism_name: Salmonella enterica subsp. enterica serovar Typhi

paired_asm_comp: identical


organism_name: Staphylococcus aureus


organism_name: Porphyromonadaceae bacterium


asm_name: Unicycler 0.5.0


organism_name: Chlamydia suis


organism_name: Caryophanales bacterium


organism_name: Ruminococcus sp.


organism_name: Clostridiales bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Hornefia butyriciproducens


organism_name: Bacillota bacterium


organism_name: Treponema sp.


organism_name: Acidaminococcus fermentans


organism_name: Eubacteriales bacterium


organism_name: Eggerthellales bacterium


group: archaea

organism_name: Methanobacteriaceae archaeon


organism_name: Oribacterium sp.


organism_name: Oscillospiraceae bacterium


organism_name: Mycoplasma sp.


organism_name: Bacteroidales bacterium


organism_name: Clostridia bacterium


organism_name: bacterium


organism_name: Erysipelotrichaceae bacterium


organism_name: Ruminococcus sp.


organism_name: Clostridiaceae bacterium


organism_name: Clostridium sp.


organism_name: Methanobrevibacter boviskoreani

refseq_category: reference genome


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; genome length too small

organism_name: Roseburia hominis


organism_name: Bacillota bacterium


organism_name: Desulfovibrio piger


organism_name: Eubacteriales bacterium


organism_name: Caryophanales bacterium


organism_name: Clostridiales bacterium


organism_name: Bacilli bacterium


organism_name: Frisingicoccus sp.


organism_name: Lachnospiraceae bacterium


organism_name: Selenomonadaceae bacterium


organism_name: Clostridia bacterium


organism_name: bacterium


organism_name: Bacteroidales bacterium


organism_name: Roseburia sp.


organism_name: [Clostridium] aminophilum


organism_name: Succinivibrio sp.


organism_name: Oscillospiraceae bacterium


organism_name: Desulfovibrionaceae bacterium


organism_name: Prevotella sp.


asm_submitter: Aarhus University Hospital

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Providencia stuartii


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


organism_name: Clostridium sp.


asm_submitter: FDA

organism_name: Escherichia coli


organism_name: Ruminobacter sp.


asm_submitter: CDC

organism_name: Salmonella enterica


organism_name: Staphylococcus aureus


organism_name: Listeria monocytogenes


organism_name: Bacillota bacterium


organism_name: Elusimicrobiota bacterium


organism_name: Bacteroidales bacterium


organism_name: Ligilactobacillus ruminis


organism_name: Lachnospiraceae bacterium


organism_name: Anaerovibrio slackiae


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Segatella copri


organism_name: Campylobacteraceae bacterium


organism_name: Bacteroides sp.


organism_name: Oscillospiraceae bacterium


organism_name: Eubacteriales bacterium


organism_name: bacterium


organism_name: Mycoplasmataceae bacterium


organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica


organism_name: Listeria innocua


organism_name: Escherichia coli


organism_name: Selenomonadaceae bacterium


organism_name: Bacteroidales bacterium


asm_submitter: Seattle University

assembly_level: Complete Genome

organism_name: Streptococcus anginosus


organism_name: Lactobacillus gasseri


organism_name: Lacticaseibacillus rhamnosus


excluded_from_refseq: many frameshifted proteins


organism_name: Lachnospiraceae bacterium


organism_name: Prevotellaceae bacterium


organism_name: Veillonellaceae bacterium


organism_name: Paraprevotella sp.


organism_name: Solobacterium sp.


organism_name: Clostridiales bacterium


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Ruminococcus sp.


organism_name: Bacillota bacterium


organism_name: Oscillospiraceae bacterium


organism_name: bacterium


organism_name: Clostridia bacterium


organism_name: Hallerella succinigenes


organism_name: Lactobacillus crispatus


organism_name: Winkia neuii


organism_name: Streptococcus agalactiae


organism_name: Staphylococcus aureus


organism_name: Streptococcus anginosus


organism_name: Enterococcus faecalis


organism_name: Lacticaseibacillus rhamnosus


organism_name: Desulfovibrionaceae bacterium


organism_name: Bifidobacterium boum


excluded_from_refseq: low quality sequence

organism_name: Staphylococcus haemolyticus


organism_name: Lactobacillus gasseri


organism_name: Bifidobacterium bifidum


organism_name: Lactobacillus mulieris


organism_name: Bacteroidales bacterium


organism_name: Bifidobacterium breve


organism_name: Limosilactobacillus fermentum


organism_name: Aerococcus christensenii


asm_submitter: Fujian Agriculture and Forestry University

organism_name: Streptomyces yunnanensis


organism_name: Winkia neuii


organism_name: Clostridiales bacterium


asm_submitter: Ghent University

organism_name: Escherichia coli


organism_name: Vagococcus lutrae


organism_name: Providencia rettgeri


organism_name: Succinivibrio sp.


organism_name: Streptococcus anginosus


organism_name: Clostridium sp.


organism_name: Bacillota bacterium


organism_name: Eubacteriaceae bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Ruminococcus sp.


organism_name: Methanobrevibacter ruminantium


organism_name: Helicobacteraceae bacterium


organism_name: bacterium


organism_name: Clostridia bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Bacteroidales bacterium


organism_name: Kiritimatiellia bacterium


organism_name: Spirochaetales bacterium


organism_name: Anaerostipes sp.


organism_name: Blautia sp.


organism_name: Clostridiales bacterium


organism_name: Methanobrevibacter wolinii


organism_name: Escherichia coli


organism_name: Salmonella enterica


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


organism_name: Prevotellaceae bacterium


organism_name: Solobacterium sp.


organism_name: Lactimicrobium massiliense


organism_name: bacterium


organism_name: Eubacteriales bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Bacteroidales bacterium


asm_submitter: Shandong University

organism_name: Bacteroides xylanisolvens


organism_name: Ligilactobacillus ruminis


organism_name: Listeria innocua


asm_submitter: Vermont Department of Health Laboratory


organism_name: Staphylococcus aureus


asm_submitter: Missouri State Public Health Laboratory

infraspecific_name: strain=Non-PulseNet


asm_submitter: GenomeTrakr Project: Massachusetts Department of Public Health


asm_submitter: National Center for Biotechnology Information


asm_submitter: FDA/CFSAN


organism_name: Enterococcus faecalis


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


asm_submitter: FDA Center for Food Safety and Applied Nutrition

organism_name: Escherichia coli


asm_submitter: Centers for Disease Control and Prevention


organism_name: Enterococcus faecium


organism_name: Salmonella enterica


organism_name: Campylobacter coli


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


asm_submitter: USDA-ARS

organism_name: Pantoea agglomerans


organism_name: Listeria monocytogenes


asm_submitter: Ocean University of China

organism_name: Vibrio sp. DW001


asm_submitter: FDA


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Klebsiella aerogenes


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Vibrio sp. JC009


asm_submitter: CDC


organism_name: Klebsiella pneumoniae


asm_submitter: Chinese Academy of Agricultural Sciences

organism_name: Bacillus velezensis


infraspecific_name: strain=Microbial


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Escherichia coli


asm_submitter: Research Center of Biotechnology RAS

organism_name: Sedimenticola hydrogenitrophicus


asm_submitter: Centro de Estudios Fotosinteticos y Bioquimicos


organism_name: Salmonella enterica


organism_name: Campylobacter jejuni


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Vibrio cholerae


organism_name: Acinetobacter baumannii


organism_name: Yersinia enterocolitica


organism_name: Proteus mirabilis


organism_name: Pseudomonas aeruginosa


organism_name: Enterobacter hormaechei


organism_name: Citrobacter freundii


organism_name: Listeria monocytogenes


organism_name: Listeria innocua


asm_submitter: Universite de Bretagne Occidentale

organism_name: Pseudoalteromonas ostreae


asm_submitter: SPC Group

organism_name: Fructilactobacillus sanfranciscensis


asm_submitter: Ji Mei University

organism_name: Vibrio alginolyticus


asm_submitter: Shanghai Jiao tong university, China

organism_name: Actomonas lomoniglobus

relation_to_type_material: assembly from type material


asm_submitter: University of Hawaii at Manoa

organism_name: Pectobacterium colocasium


asm_submitter: Agroscope

infraspecific_name: strain=DSM 20340

organism_name: Aerococcus viridans


infraspecific_name: strain=DSM 20477

organism_name: Enterococcus faecium


infraspecific_name: strain=DSM 15046

organism_name: Arthrobacter citreus


infraspecific_name: strain=DSM 20726

organism_name: Enterococcus saccharolyticus subsp. saccharolyticus


infraspecific_name: strain=DSM 20316

organism_name: Staphylococcus warneri


infraspecific_name: strain=DSM 20481

organism_name: Lactococcus lactis


infraspecific_name: strain=DSM 20263

organism_name: Staphylococcus haemolyticus


infraspecific_name: strain=DSM 2403

organism_name: Acinetobacter lwoffii


infraspecific_name: strain=DSM 15615

organism_name: Mammaliicoccus vitulinus


infraspecific_name: strain=DSM 20684

organism_name: Lactococcus garvieae subsp. garvieae


asm_submitter: National Center for Biotechnology Information

organism_name: Listeria monocytogenes


infraspecific_name: strain=DSM 20454

organism_name: Staphylococcus chromogenes


infraspecific_name: strain=DSM 2048

organism_name: Bacillus mycoides


infraspecific_name: strain=DSM 20478

organism_name: Enterococcus faecalis


infraspecific_name: strain=DSM 14617

organism_name: Staphylococcus succinus


infraspecific_name: strain=DSM 20674

organism_name: Staphylococcus equorum


asm_submitter: Taizhou Municipal Hospital

organism_name: Aeromonas allosaccharophila


organism_name: Aeromonas media


asm_submitter: USDA

organism_name: Campylobacter jejuni


asm_submitter: Nanjing Agricultural University

organism_name: Bacillus velezensis


asm_submitter: University of Regina

organism_name: Mycobacteroides chelonae


asm_submitter: State Veterinary Institute Prague

organism_name: Taylorella equigenitalis


asm_submitter: The Independent Schools Foundation Academy

organism_name: Serratia marcescens


asm_submitter: Universidade Federal de Sao Paulo

organism_name: Staphylococcus epidermidis


organism_name: Acinetobacter pittii


asm_submitter: Qingdao Agricultural University

organism_name: Pediococcus acidilactici


asm_submitter: The First Affiliated Hospital of Zhejiang University

organism_name: Citrobacter koseri


organism_name: Aeromonas caviae


organism_name: Aeromonas hydrophila


organism_name: Klebsiella pneumoniae subsp. pneumoniae


asm_submitter: China Agricultural University

organism_name: Lactiplantibacillus paraplantarum


asm_submitter: College of Chemistry and Chemical Engineering, Chongqing University of Technology

organism_name: Acinetobacter sp. TAC-1


organism_name: Listeria monocytogenes


asm_submitter: Xiangya Hospital, Central South University

infraspecific_name: strain=CRKP

organism_name: Klebsiella pneumoniae


asm_submitter: northwestern university

organism_name: Legionella cardiaca


infraspecific_name: strain=T-hvKP


asm_submitter: Universite de Bretagne Occidentale

organism_name: Pseudoalteromonas ostreae


asm_submitter: Center for Genomic Sciences

organism_name: Exiguobacterium profundum


asm_submitter: Ghent University


excluded_from_refseq: annotation fails completeness check

organism_name: Vibrio cholerae


asm_submitter: Zhejiang University

organism_name: Comamonas testosteroni


organism_name: Escherichia coli


asm_submitter: Institute of crop sciences, Chinese academy of agricultural sciences

infraspecific_name: strain=GIV

organism_name: Xanthomonas oryzae


asm_submitter: Queen Mary University of London

excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Arcobacter sp.


organism_name: Sulfurimonas sp.


assembly_level: Chromosome


organism_name: Oceanospirillales bacterium


asm_submitter: Shenzhen University

infraspecific_name: strain=NCIB 3610

organism_name: Bacillus subtilis


asm_submitter: Biotechnology Centre of Ho Chi Minh city

organism_name: Aeromonas hydrophila


asm_submitter: Yangtze University

organism_name: Klebsiella michiganensis


asm_submitter: Guangxi Academy of Specialty Crops, Nanjing Agricultural University

organism_name: Pectobacterium actinidiae


organism_name: Bacillus pacificus


asm_submitter: Shanghai Ocean University

organism_name: Microbacterium maritypicum


asm_submitter: Chinese Academy of Sciences

organism_name: Paracoccus qomolangmaensis


asm_submitter: The Independent Schools Foundation Academy

excluded_from_refseq: unverified source organism; annotation fails completeness check

organism_name: Klebsiella aerogenes


asm_submitter: National Centre For Cell Science (NCCS)

infraspecific_name: strain=MEB 203

organism_name: Alkalihalobacterium chitinilyticum


asm_submitter: National Center for Biotechnology Information

organism_name: Listeria monocytogenes


asm_submitter: University of Tuebingen

infraspecific_name: strain=ACM 3522

organism_name: Pseudoduganella chitinolytica


asm_submitter: University of Wyoming


organism_name: Enterobacter hormaechei


organism_name: Enterobacter ludwigii


organism_name: Providencia rettgeri


asm_submitter: Ocean University of China

excluded_from_refseq: contaminated

organism_name: Ancylomarina sp. DW003


organism_name: Paralabilibaculum antarcticum


organism_name: Staphylococcus aureus


annotation_name: Annotation submitted by Bielefeld University

annotation_provider: Bielefeld University

asm_submitter: Bielefeld University

infraspecific_name: strain=DSM 1083

organism_name: Afipia carboxydohydrogena


asm_submitter: FDA Center for Food Safety and Applied Nutrition


asm_submitter: FDA/CFSAN


asm_submitter: CDC

organism_name: Shigella flexneri


organism_name: Salmonella enterica


organism_name: Escherichia coli


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


organism_name: Vibrio parahaemolyticus


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter coli


organism_name: Shigella sonnei


excluded_from_refseq: contaminated; from large multi-isolate project


annotation_name: Annotation submitted by National Library of Medicine

annotation_provider: National Library of Medicine

asm_submitter: National Institute of Biotechnology

organism_name: Klebsiella ornithinolytica


asm_submitter: FDA


organism_name: Campylobacter jejuni


organism_name: Proteus mirabilis


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Campylobacter upsaliensis


organism_name: Klebsiella aerogenes


organism_name: Listeria monocytogenes


organism_name: Pseudomonas aeruginosa


organism_name: Klebsiella pneumoniae


organism_name: Staphylococcus aureus


asm_submitter: The First Affiliated Hospital of Medical College, Zhejiang University

organism_name: Elizabethkingia meningoseptica


asm_submitter: University of Queensland

excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Bacilli bacterium


organism_name: Bacteroidales bacterium


organism_name: Clostridia bacterium


organism_name: Muribaculaceae bacterium


organism_name: Bacteroidaceae bacterium


organism_name: Anaeroplasmataceae bacterium


organism_name: Ruminococcus sp.


organism_name: Malacoplasma sp.


organism_name: Oscillospiraceae bacterium


organism_name: Clostridiales bacterium


organism_name: Prevotella sp.


organism_name: Acetatifactor sp.


organism_name: Treponemataceae bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Alistipes sp.


organism_name: Helicobacter sp.


organism_name: Lachnospiraceae bacterium


organism_name: Ureaplasma sp.


excluded_from_refseq: derived from metagenome; genus undefined


organism_name: Eubacterium sp.


organism_name: Bacteroidales bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Odoribacter sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Muribaculaceae bacterium


organism_name: Bacilli bacterium


organism_name: Clostridia bacterium


organism_name: Candidatus Amulumruptor sp.


organism_name: Ruminococcus sp.


organism_name: Oscillospiraceae bacterium


organism_name: Bifidobacterium castoris


organism_name: Duncaniella sp.


asm_submitter: university of Abderrahmane Mira

organism_name: Bradyrhizobium sp. CSA112


organism_name: Bradyrhizobium sp. CSA207


asm_submitter: Universidade Federal do Rio Grande do Sul

organism_name: Pseudomonas sp. 4B


organism_name: Bradyrhizobium sp. CSS354


organism_name: Anaeroplasmataceae bacterium


organism_name: Alistipes sp.


organism_name: Paramuribaculum sp.


organism_name: Muribaculum sp.


organism_name: Mailhella sp.


organism_name: Muribaculaceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Eubacterium sp.


organism_name: Phocaeicola sp.


organism_name: Clostridia bacterium


organism_name: Bacteroides sp.


organism_name: Bacteroidales bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Duncaniella sp.


organism_name: Ruminococcus sp.


organism_name: Allobaculum sp.


organism_name: Treponemataceae bacterium


organism_name: Acetatifactor sp.


organism_name: Malacoplasma sp.


organism_name: Prevotella sp.


organism_name: Bacteroidaceae bacterium


organism_name: Paramuribaculum sp.


organism_name: Muribaculaceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Helicobacter sp.


organism_name: Desulfovibrio sp.


organism_name: Alistipes sp.


organism_name: Clostridia bacterium


organism_name: Anaeroplasmataceae bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Bacilli bacterium


organism_name: Bacteroidales bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Muribaculum intestinale


organism_name: Treponemataceae bacterium


excluded_from_refseq: derived from metagenome

organism_name: Duncaniella sp.


organism_name: Ruminococcus sp.


organism_name: Campylobacter jejuni


organism_name: Turicibacter sp.


organism_name: Rikenella sp.


organism_name: Eubacterium sp.


organism_name: Muribaculaceae bacterium


organism_name: Muribaculum sp.


organism_name: Bacteroidaceae bacterium


organism_name: Paramuribaculum sp.


organism_name: Helicobacter sp.


organism_name: Prevotella sp.


organism_name: Clostridia bacterium


organism_name: Alistipes sp.


organism_name: Bacteroidales bacterium


organism_name: Malacoplasma sp.


organism_name: Acetatifactor sp.


organism_name: Lachnospiraceae bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Ruminococcus sp.


organism_name: Anaeroplasmataceae bacterium


organism_name: Clostridiales bacterium


organism_name: Duncaniella sp.


organism_name: Muribaculaceae bacterium


organism_name: Treponemataceae bacterium


organism_name: Eubacterium sp.


organism_name: Muribaculum sp.


organism_name: Paramuribaculum sp.


organism_name: Duncaniella dubosii


organism_name: Bacilli bacterium


organism_name: Alistipes sp.


organism_name: Bacteroidales bacterium


organism_name: Prevotella sp.


organism_name: Bacteroides sp.


organism_name: Rikenellaceae bacterium


organism_name: Bacteroidaceae bacterium


organism_name: Acetatifactor sp.


organism_name: Lachnospiraceae bacterium


organism_name: Phocaeicola sp.


organism_name: Duncaniella sp.


organism_name: Muribaculaceae bacterium


organism_name: Eubacteriales bacterium


organism_name: Clostridia bacterium


organism_name: Erysipelotrichaceae bacterium


organism_name: Clostridiales bacterium


organism_name: Treponemataceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Anaeroplasmataceae bacterium


organism_name: Paramuribaculum sp.


organism_name: Oscillospiraceae bacterium


organism_name: Bacilli bacterium


organism_name: Ureaplasma sp.


organism_name: Bacteroidales bacterium


organism_name: Mycoplasmoidaceae bacterium


organism_name: Lactobacillus sp.


organism_name: Lachnospiraceae bacterium


organism_name: Opitutales bacterium


organism_name: Muribaculaceae bacterium


organism_name: Duncaniella sp.


organism_name: Bacteroides sp.


organism_name: Eubacterium sp.


organism_name: Prevotella sp.


organism_name: Eubacteriales bacterium


organism_name: Clostridia bacterium


organism_name: Alistipes sp.


organism_name: Ligilactobacillus sp.


organism_name: Odoribacter sp.


organism_name: Dysosmobacter sp.


organism_name: Muribaculum sp.


organism_name: Erysipelotrichaceae bacterium


organism_name: Ureaplasma sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Rikenellaceae bacterium


organism_name: Rikenella sp.


organism_name: Muribaculaceae bacterium


organism_name: Ruminococcus sp.


organism_name: Bacteroidales bacterium


organism_name: Acetatifactor sp.


organism_name: Duncaniella sp.


organism_name: Paramuribaculum sp.


organism_name: Treponemataceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Anaeroplasmataceae bacterium


organism_name: Clostridia bacterium


organism_name: Malacoplasma sp.


organism_name: Eubacterium sp.


organism_name: Ruminiclostridium sp.


organism_name: Alistipes sp.


organism_name: Oscillospiraceae bacterium


organism_name: Clostridiales bacterium


organism_name: Bacteroidaceae bacterium


organism_name: Muribaculaceae bacterium


organism_name: Ruminococcus sp.


organism_name: Prevotella sp.


organism_name: Acetatifactor sp.


organism_name: Bacteroidales bacterium


organism_name: Desulfovibrio sp.


organism_name: Treponemataceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Duncaniella sp.


organism_name: Clostridia bacterium


organism_name: Malacoplasma sp.


organism_name: Paramuribaculum sp.


organism_name: Phocaeicola sp.


organism_name: Bacteroides acidifaciens


organism_name: Acutalibacter sp.


organism_name: Alistipes sp.


organism_name: Odoribacter sp.


organism_name: Helicobacteraceae bacterium


organism_name: Eubacterium sp.


organism_name: Oscillospiraceae bacterium


organism_name: Lawsonibacter sp.


organism_name: Acetatifactor sp.


organism_name: Limosilactobacillus sp.


organism_name: Anaeroplasmataceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Muribaculaceae bacterium


organism_name: Clostridia bacterium


organism_name: Clostridiales bacterium


organism_name: Erysipelotrichales bacterium


organism_name: Helicobacter apodemus


organism_name: Helicobacter sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Mailhella sp.


organism_name: Alistipes sp.


organism_name: Kineothrix sp.


organism_name: Paramuribaculum sp.


organism_name: Mucispirillum sp.


organism_name: Duncaniella freteri


organism_name: Ligilactobacillus sp.


organism_name: Eubacteriales bacterium


organism_name: Lactobacillus sp.


organism_name: Limosilactobacillus sp.


organism_name: Schaedlerella arabinosiphila


organism_name: Desulfovibrionaceae bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Bacteroidales bacterium


organism_name: Odoribacter sp.


organism_name: Clostridia bacterium


organism_name: Muribaculaceae bacterium


organism_name: Alistipes sp.


organism_name: Malacoplasma sp.


organism_name: Prevotella sp.


organism_name: Anaeroplasmataceae bacterium


organism_name: Ruminococcus sp.


organism_name: Acetatifactor sp.


organism_name: Clostridiales bacterium


organism_name: Bacteroidaceae bacterium


organism_name: Eubacterium sp.


organism_name: Duncaniella sp.


organism_name: Candidatus Amulumruptor sp.


organism_name: Rikenellaceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Bacteroidales bacterium


organism_name: Treponemataceae bacterium


organism_name: Clostridia bacterium


organism_name: Muribaculaceae bacterium


organism_name: Mucispirillum sp.


organism_name: Helicobacter sp.


organism_name: Oscillospiraceae bacterium


organism_name: Ureaplasma sp.


organism_name: Anaeroplasmataceae bacterium


organism_name: Paramuribaculum sp.


organism_name: Helicobacter japonicus


organism_name: Ruminococcus sp.


organism_name: Desulfovibrio sp.


organism_name: Acetatifactor sp.


organism_name: Ruminiclostridium sp.


organism_name: Alistipes sp.


organism_name: Lachnospiraceae bacterium


organism_name: Rikenellaceae bacterium


organism_name: Eubacterium sp.


organism_name: Clostridia bacterium


organism_name: Muribaculaceae bacterium


organism_name: Bacteroidales bacterium


organism_name: Treponemataceae bacterium


organism_name: Paraprevotella sp.


organism_name: Muribaculum sp.


organism_name: Odoribacter sp.


organism_name: Clostridiales bacterium


asm_submitter: Universite Laval

organism_name: Aeromonas salmonicida


asm_submitter: Instituto Nacional de Salud

infraspecific_name: strain=INS 041

organism_name: Bacillus tropicus


infraspecific_name: strain=INS 045


asm_submitter: university of Ghent

organism_name: Gluconobacter sphaericus


infraspecific_name: strain=INS 009

organism_name: Bacillus cereus


asm_submitter: Wageningen University & Research

organism_name: Streptococcus suis


organism_name: Acetobacter fabarum


asm_submitter: NYU Grossman School of Medicine

organism_name: Enterobacter hormaechei


organism_name: Enterobacter bugandensis


organism_name: Enterobacter cloacae


organism_name: Enterobacter asburiae


asm_submitter: Pathogenomics Lab/LAU

organism_name: Escherichia coli


asm_submitter: Heidelberg University Hospital


asm_submitter: The Chinese University of Hong Kong

excluded_from_refseq: fragmented assembly; genome length too small

organism_name: Streptococcus agalactiae


organism_name: Treponemataceae bacterium


asm_submitter: Indian Institution of Technology Madras

organism_name: Pediococcus pentosaceus


organism_name: Ligilactobacillus salivarius


organism_name: Muribaculaceae bacterium


organism_name: Clostridiales bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Paramuribaculum sp.


organism_name: Oscillospiraceae bacterium


organism_name: Clostridia bacterium


organism_name: Mycoplasmoidaceae bacterium


organism_name: Prevotella sp.


organism_name: Helicobacter sp.


organism_name: Alistipes sp.


organism_name: Duncaniella sp.


organism_name: Desulfovibrionaceae bacterium


asm_submitter: Soochow University

organism_name: Escherichia coli


asm_submitter: Institute of Microbiology, Chinese Academy of Sciences

organism_name: Streptococcus mutans


asm_submitter: City University of Hong Kong

organism_name: Actinobacillus equuli subsp. equuli


asm_submitter: Deparment of Primary Industries NSW

excluded_from_refseq: from large multi-isolate project

organism_name: Erysipelothrix rhusiopathiae


organism_name: Enterobacter hormaechei


organism_name: Enterobacter cloacae


organism_name: Enterobacter kobei


asm_submitter: University of Oxford


asm_submitter: National Medicines Institute

organism_name: Providencia stuartii


asm_submitter: Oklahoma State University

organism_name: Citrobacter freundii


asm_submitter: Hebei Agricultural University

organism_name: Pectobacterium polaris


organism_name: Aeromonas hydrophila


asm_submitter: Instituto Adolfo Lutz

organism_name: Klebsiella pneumoniae


asm_submitter: Universidad de La Sabana

organism_name: Priestia aryabhattai


asm_submitter: Chinese Academy of Sciences

organism_name: Pseudarthrobacter naphthalenicus


asm_submitter: University of Chicago

organism_name: Adlercreutzia rubneri


asm_submitter: University of Pretoria

organism_name: Rhizobium sp. CBK13


organism_name: Bacteroides cellulosilyticus


excluded_from_refseq: genus undefined

organism_name: Eubacteriales bacterium DFI.9.88


organism_name: [Eubacterium] siraeum


organism_name: Mediterraneibacter torques


organism_name: Faecalibacterium sp. DFI.5.82


organism_name: Alistipes putredinis


organism_name: Blautia schinkii


organism_name: Limosilactobacillus mucosae


organism_name: Streptococcus gordonii


organism_name: Veillonella atypica


organism_name: Adlercreutzia equolifaciens


organism_name: Ruminococcus bromii


organism_name: Faecalibacterium prausnitzii


organism_name: Escherichia coli


organism_name: Desulfovibrio desulfuricans


organism_name: [Ruminococcus] lactaris


organism_name: Phocaeicola vulgatus


organism_name: Novosphingobium album (ex Liu et al. 2023)


asm_submitter: Bowling Green State University

organism_name: Proteus mirabilis

release_type: Minor


asm_submitter: Faculty of Natural Sciences, Comenius University in Bratislava

organism_name: Listeria monocytogenes


asm_submitter: Jiangsu Academy of Agricultural Sciences

infraspecific_name: strain=HQ

organism_name: Rhodococcus qingshengii


asm_submitter: Karadeniz Technical University

infraspecific_name: strain=DSM 17127

organism_name: Anoxybacteroides rupiense


asm_submitter: Texas A&M University

organism_name: Arthrobacter sp. NQ4


asm_submitter: Pontificia Universidad Catolica de Chile

organism_name: Rickettsia felis


organism_name: Erysipelothrix rhusiopathiae


asm_submitter: Fundacion Ciencia y Vida

organism_name: Acidocella sp.


asm_submitter: Nottingham Trent University

organism_name: Klebsiella pneumoniae


organism_name: Klebsiella variicola


asm_submitter: Chinese Center for Disease Control and Prevention's infectious disease unit

organism_name: Staphylococcus aureus


asm_submitter: University of Malaga

infraspecific_name: strain=Pag UMAF3084

organism_name: Pantoea vagans


infraspecific_name: strain=Pag UMAF3067


asm_submitter: Institute for Genome Sciences, University of Maryland, Baltimore

organism_name: Mycobacteroides abscessus subsp. bolletii


asm_submitter: Dalian University of Technology

excluded_from_refseq: unverified source organism

organism_name: Vibrio alginolyticus


asm_submitter: Yunnan University

infraspecific_name: strain=YIM 133132

organism_name: Luteipulveratus flavus


asm_submitter: CDC Prevention Epicenter Program

organism_name: Escherichia coli


asm_submitter: Eskisehir Osmangazi University Biotechnology Laboratory

organism_name: Halomonas elongata


asm_submitter: University of Georgia

organism_name: Pantoea ananatis


organism_name: Proteus mirabilis


asm_submitter: University of Calgary

organism_name: Citrobacter freundii


organism_name: Citrobacter koseri


organism_name: Citrobacter portucalensis


organism_name: Citrobacter farmeri


organism_name: Citrobacter amalonaticus


organism_name: Citrobacter braakii


asm_submitter: sichuan university

organism_name: Providencia vermicola


organism_name: Klebsiella quasipneumoniae


asm_submitter: Peking University People's Hospital

organism_name: Staphylococcus aureus


asm_submitter: University of Guelph

organism_name: Salmonella enterica


asm_submitter: Saint-Louis Hospital


asm_submitter: Zhoukou Normal University

organism_name: Limnobacter olei


asm_submitter: The First Affiliated Hospital of Guangzhou Medical University


asm_submitter: NANJING NORMAL UNIVERSITY

organism_name: Serratia rubidaea


organism_name: Klebsiella pneumoniae


asm_submitter: Chinese Academy of Agricultural Sciences

organism_name: Amycolatopsis sp. La24


organism_name: Escherichia coli


asm_submitter: National Center for Biotechnology Information

organism_name: Clostridioides difficile


isolate: human


organism_name: Clostridioides difficile CD196


asm_submitter: CDC


asm_submitter: FDA


organism_name: Shigella flexneri


organism_name: Shigella sonnei


infraspecific_name: strain=KUGBRCGV

organism_name: Providencia rettgeri


organism_name: Enterobacter hormaechei


isolate: P104_Day8_abdominal fluid


organism_name: Enterobacter asburiae


isolate: P104_Day10_lower respiratory


isolate: P105_Day0_lower respiratory


isolate: P108_Day0_lower respiratory


isolate: P110_Day0_lower respiratory


organism_name: Klebsiella aerogenes


isolate: P110_Day123_lower respiratory


isolate: P101_Day0_lower respiratory

organism_name: Enterobacter kobei


isolate: P115_Day0_lower respiratory

organism_name: Klebsiella michiganensis


isolate: P101_Day2_abdominal fluid


isolate: P118_Day0_lower respiratory


isolate: P120_Day0_lower respiratory


isolate: P120_Day12_lower respiratory


organism_name: Klebsiella quasipneumoniae


isolate: P103_Day0_lower respiratory


asm_submitter: FDA Center for Food Safety and Applied Nutrition

organism_name: Staphylococcus aureus


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


asm_submitter: FDA/CFSAN


asm_submitter: US FDA


asm_submitter: National Institute of Agricultural Sciences, Rural Development Administration

infraspecific_name: strain=KACC 23027

organism_name: Microbacterium horticulturae


infraspecific_name: strain=KACC 23026

organism_name: Pullulanibacillus sp. KACC 23026


asm_submitter: Fujian Academy of Agricultural Sciences

infraspecific_name: strain=DSM 8715

organism_name: Alkalihalophilus pseudofirmus


organism_name: Escherichia coli


organism_name: Klebsiella pneumoniae


organism_name: Clostridioides difficile


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Staphylococcus pseudintermedius


organism_name: Salmonella enterica


asm_submitter: US Food and Drug Administration


asm_submitter: New York State Dept. of Health - Wadsworth Center


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Shigella flexneri


organism_name: Shigella sonnei


asm_submitter: Agriculture and Agri-Food Canada

organism_name: Turicibacter sp.


organism_name: Bacteroidales bacterium


organism_name: Bacillota bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Paraprevotella sp.


organism_name: Paludibacteraceae bacterium


organism_name: Clostridium sp.


organism_name: Lachnospiraceae bacterium


organism_name: Escherichia coli


organism_name: Clostridiales bacterium


organism_name: bacterium


organism_name: Eubacteriales bacterium


organism_name: Spirochaetales bacterium


organism_name: Clostridia bacterium


organism_name: Ellagibacter isourolithinifaciens


organism_name: Salmonella enterica


organism_name: Clostridioides difficile


organism_name: Staphylococcus pseudintermedius


organism_name: Bacteroidales bacterium


organism_name: Fibrobacter sp.


organism_name: Oscillospiraceae bacterium


organism_name: Prevotellaceae bacterium


organism_name: Coriobacteriaceae bacterium


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Ruminococcus sp.


organism_name: Staphylococcus aureus


organism_name: Erysipelotrichaceae bacterium


organism_name: Bacillota bacterium


organism_name: Allobaileyella intestinalis


organism_name: Shigella sonnei


organism_name: Escherichia coli


organism_name: Stecheria intestinalis


organism_name: Clostridia bacterium


organism_name: Clostridiales bacterium


organism_name: Lachnospiraceae bacterium


asm_submitter: Central south university

organism_name: Acinetobacter nosocomialis


organism_name: bacterium


organism_name: Succinatimonas sp.


organism_name: Eubacteriales bacterium


organism_name: Prevotella sp.


organism_name: Galactobacillus timonensis


organism_name: Olsenella sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; genome length too small

organism_name: Gemmiger formicilis


organism_name: Solobacterium sp.


organism_name: Bacteroidales bacterium


organism_name: Treponema berlinense


organism_name: Lachnospira sp.


organism_name: Bacilli bacterium


organism_name: Prevotellaceae bacterium


organism_name: Bacillota bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Treponema sp.


organism_name: Clostridiales bacterium


organism_name: Eggerthellales bacterium


organism_name: Coriobacteriales bacterium


organism_name: Clostridiaceae bacterium


organism_name: Clostridia bacterium


organism_name: Erysipelotrichaceae bacterium


organism_name: Spirochaetia bacterium


organism_name: Campylobacter lanienae


organism_name: Prevotella sp.


organism_name: Muribaculaceae bacterium


organism_name: Bacteroidales bacterium


asm_submitter: Fred Hutchinson Cancer Center

infraspecific_name: strain=UPII 610-J

organism_name: Amygdalobacter indicium


infraspecific_name: strain=CHIC02 1186E3-8


infraspecific_name: strain=ACE 1-034E1-9

organism_name: Amygdalobacter nucleatus


organism_name: Staphylococcus aureus


asm_submitter: Deparment of Primary Industries NSW

organism_name: Erysipelothrix rhusiopathiae


asm_submitter: Universidad Nacional Mayor de San Marcos

organism_name: Pseudomonas aeruginosa


asm_submitter: Universidad de Leon

organism_name: Escherichia fergusonii


asm_submitter: National Center for Biotechnology Information

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Corvallis


asm_submitter: Nizhny Novgorod Research Veterinary Institute Branch of FRCVM

organism_name: Escherichia marmotae


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


asm_submitter: Washington University in St. Louis

organism_name: Staphylococcus delphini


organism_name: Staphylococcus pseudintermedius


asm_submitter: Jozef Stefan Institute

organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: the First Medicine Centre, Chinese PLA General Hospital

organism_name: Citrobacter portucalensis


organism_name: Citrobacter koseri


organism_name: Citrobacter braakii


organism_name: Citrobacter freundii


organism_name: Citrobacter cronae


asm_submitter: Xenorhabdus project-Indiana University

infraspecific_name: strain=intermedium LD_3

organism_name: Xenorhabdus bovienii


infraspecific_name: strain=texanum MM_17


infraspecific_name: strain=affine MC_255


infraspecific_name: strain=affine MC_228


infraspecific_name: strain=texanum MC_250


infraspecific_name: strain=affine MC_221


infraspecific_name: strain=texanum MC_214


infraspecific_name: strain=intermedium MM_1


infraspecific_name: strain=affine MC_216


infraspecific_name: strain=affine MC_211


infraspecific_name: strain=affine MC_202


infraspecific_name: strain=kraussei MC_95


infraspecific_name: strain=affine MC_218


infraspecific_name: strain=kraussei MC_96


infraspecific_name: strain=affine MC_94


infraspecific_name: strain=affine MC_78


infraspecific_name: strain=kraussei MC_67


infraspecific_name: strain=affine MC_81


infraspecific_name: strain=kraussei MC_59


infraspecific_name: strain=affine MC_52


infraspecific_name: strain=kraussei MC_47


infraspecific_name: strain=kraussei MC_44


infraspecific_name: strain=texanum MC_19


infraspecific_name: strain=texanum MC_11


infraspecific_name: strain=affine MC_66


infraspecific_name: strain=affine MC_10


infraspecific_name: strain=intermedium LD_52


infraspecific_name: strain=intermedium LD_45


infraspecific_name: strain=texanum LD_27A


infraspecific_name: strain=intermedium LD_21


infraspecific_name: strain=intermedium LD_8


infraspecific_name: strain=kraussei LD_5


asm_submitter: Ningbo University

organism_name: Aliiroseovarius sp. Z3


infraspecific_name: strain=affine LD_28


asm_submitter: Institute of Sciences of Food Production (ISPA)

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

infraspecific_name: strain=ITEM 18282

organism_name: Staphylococcus xylosus


asm_submitter: University of the Philippines Diliman

organism_name: Nodosilinea sp. PGN35


asm_submitter: CDC Prevention Epicenter Program

organism_name: Klebsiella pneumoniae


organism_name: Escherichia coli


organism_name: Proteus mirabilis


asm_submitter: Saint-Louis Hospital


asm_submitter: UCIBIO, Faculty of Pharmacy, University of Porto

organism_name: Enterococcus faecium


asm_submitter: Universidad Andres Bello

organism_name: Tenacibaculum bernardetii


annotation_name: Annotation submitted by Institute of Advanced Study in Science and Technology (IASST)

organism_name: Streptomyces sp. KA12


asm_submitter: Federal University of Rio Grande do Sul

organism_name: Clostridioides difficile


organism_name: Enterococcus faecalis


organism_name: Clostridium tertium


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Corvallis


organism_name: Salmonella enterica subsp. enterica serovar Altona


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Bovismorbificans


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


asm_submitter: CDC

organism_name: Salmonella enterica


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Pseudomonas aeruginosa


organism_name: Klebsiella pneumoniae


organism_name: Acinetobacter baumannii


organism_name: Escherichia coli


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


asm_submitter: National Center for Biotechnology Information

isolate: Enterococcus faecium

organism_name: Enterococcus faecium


organism_name: Shigella flexneri


asm_submitter: FDA


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica


asm_submitter: FDA Center for Food Safety and Applied Nutrition


asm_submitter: FDA/CFSAN

organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Ohio


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Anatum


asm_submitter: USDA FSIS


organism_name: Salmonella enterica subsp. enterica serovar Aberdeen


organism_name: Salmonella enterica subsp. enterica serovar Bovismorbificans


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


organism_name: Salmonella enterica subsp. enterica serovar Agona


asm_submitter: Chinese Academy of Sciences

organism_name: Methylophilus sp. YYY-1


organism_name: Salmonella enterica subsp. enterica serovar Birkenhead


organism_name: Salmonella enterica subsp. enterica serovar Dublin


asm_submitter: Nanjing Agricultural University

organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Corvallis


organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Coeln


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Bredeney


organism_name: Salmonella enterica subsp. enterica serovar Bahrenfeld


organism_name: Salmonella enterica subsp. enterica serovar Emmastad


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Bovismorbificans


organism_name: Salmonella enterica subsp. enterica serovar Ball


organism_name: Salmonella enterica subsp. enterica serovar Abortusovis


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Birkenhead


organism_name: Salmonella enterica subsp. enterica serovar Corvallis


organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Concord


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Apeyeme


organism_name: Salmonella enterica subsp. enterica serovar Aberdeen


organism_name: Salmonella enterica subsp. enterica serovar Bahrenfeld


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Bovismorbificans


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Adelaide


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Abortusovis


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Emek


organism_name: Salmonella enterica subsp. enterica serovar Birkenhead


organism_name: Salmonella enterica subsp. enterica serovar Chester


asm_submitter: University of Helsinki

organism_name: Vagococcus proximus


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Vagococcus intermedius


organism_name: Salmonella enterica subsp. enterica serovar Corvallis


organism_name: Salmonella enterica subsp. enterica serovar Altona


organism_name: Salmonella enterica subsp. enterica serovar Bredeney


organism_name: Salmonella enterica subsp. enterica serovar Apeyeme


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Aberdeen


organism_name: Salmonella enterica subsp. enterica serovar Bovismorbificans


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Eastbourne


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Klebsiella pneumoniae


isolate: AS

organism_name: Aeromonas salmonicida


organism_name: Aeromonas veronii


organism_name: Aeromonas veronii AMC24


isolate: Alleyway 5


asm_submitter: Vet-LIRN-CVM-FDA


organism_name: Aeromonas sobria


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Aeromonas bestiarum


infraspecific_name: strain=salmonicida

isolate: salmonicida


asm_submitter: Zhejiang University

organism_name: Salmonella enterica subsp. enterica serovar Goldcoast


asm_submitter: Northwest A&F University

excluded_from_refseq: RefSeq annotation failed

infraspecific_name: strain=KKP 3000

organism_name: Alicyclobacillus fastidiosus


asm_submitter: N

organism_name: Streptomyces sp. VNUA24


asm_submitter: Institute of Plant Protection, Chinese Academy of Agricultural Sciences

organism_name: Streptomyces noursei


asm_submitter: Research Center of Biotechnology RAS

infraspecific_name: strain=Mx

organism_name: Candidatus Methanocrinis natronophilus


asm_submitter: Universidad de Salamanca

organism_name: Bradyrhizobium yuanmingense


asm_submitter: University of North Bengal

organism_name: Klebsiella aerogenes


asm_submitter: Pontificia Universidad Catolica de Chile

organism_name: Pseudomonas aeruginosa


organism_name: Sphingomonas pollutisoli


asm_submitter: Jinan University

organism_name: Shewanella sp. A32


organism_name: Candidatus Methanocrinis alkalitolerans


organism_name: Sphingobium arseniciresistens


infraspecific_name: strain=UHCC 0994

organism_name: Kamptonema sp. UHCC 0994


asm_submitter: Tokyo University of Marine Science and Technology

organism_name: Bacteroides xylanisolvens


asm_submitter: International Centre for Diarrhoeal Disease Research, Bangladesh (icddr,b)

organism_name: Escherichia coli


asm_submitter: Fred Hutchinson Cancer Center

organism_name: Amygdalobacter nucleatus


asm_submitter: Universidad de La Frontera

organism_name: Tsukamurella sp. 8F


organism_name: Tsukamurella sp. 8J


asm_submitter: University of the Sunshine Coast

organism_name: Burkholderia cenocepacia


asm_submitter: Chinese Academy of Sciences

organism_name: Agromyces chromiiresistens


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Citrobacter freundii


asm_submitter: Peking University Third Hospital

organism_name: Klebsiella pneumoniae


asm_submitter: FDA Center for Food Safety and Applied Nutrition

organism_name: Enterococcus faecalis


asm_submitter: Albert Ludwigs Universitaet Freiburg

infraspecific_name: strain=AM 3-1-1

organism_name: Streptomyces sp. AM 3-1-1


asm_submitter: Harbin Meihua Biotechnology Co., LTD

isolate: gut

organism_name: Bifidobacterium animalis subsp. lactis


infraspecific_name: strain=AM 4-1-1

organism_name: Streptomyces sp. AM 4-1-1


infraspecific_name: strain=AM 2-1-1

organism_name: Streptomyces sp. AM 2-1-1


organism_name: Enterococcus faecium


asm_submitter: South China Agricultural University

organism_name: Staphylococcus aureus


asm_submitter: The First Affiliated Hospital of Nanchang University


asm_submitter: National Center for Biotechnology Information

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


asm_submitter: National Yang Ming Chiao Tung University


asm_submitter: Shandong University at Weihai

infraspecific_name: strain=MCCC 1K03203

organism_name: Psychromarinibacter halotolerans


organism_name: Psychromarinibacter sediminicola


organism_name: Acinetobacter soli


organism_name: Acinetobacter johnsonii


excluded_from_refseq: many frameshifted proteins


organism_name: Acinetobacter baumannii


excluded_from_refseq: annotation fails completeness check


organism_name: Acinetobacter proteolyticus


organism_name: Acinetobacter bereziniae


asm_submitter: Central South University

organism_name: Mycolicibacterium austroafricanum


organism_name: Salmonella enterica subsp. enterica serovar Bovismorbificans


organism_name: Escherichia coli


asm_submitter: University of Georgia

organism_name: Pantoea ananatis


asm_submitter: La Trobe University

organism_name: Wolbachia endosymbiont of Onchocerca gibsoni


asm_submitter: FDA

organism_name: Listeria innocua


asm_submitter: USDA FSIS

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


organism_name: Campylobacter lari


asm_submitter: CDC


organism_name: Shigella flexneri


organism_name: Salmonella enterica


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


isolate: whole organism


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Salmonella enterica subsp. enterica serovar Muenchen


asm_submitter: Megan Young


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Klebsiella pneumoniae


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Alachua


organism_name: Salmonella enterica subsp. enterica serovar London


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Escherichia coli


organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Adelaide


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Pseudomonas aeruginosa


organism_name: Acinetobacter baumannii


organism_name: Escherichia coli


organism_name: Klebsiella pneumoniae


organism_name: Enterobacter hormaechei


organism_name: Klebsiella michiganensis


organism_name: Citrobacter freundii


organism_name: Enterobacter cloacae


organism_name: Klebsiella quasipneumoniae


organism_name: Salmonella enterica


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


isolate: human


isolate: environmental


isolate: food


asm_submitter: Center for Food Safety and Applied Nutrition


organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar London


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: Centers for Disease Control and Prevention


organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: COMSATS University Islamabad, Pakistan

organism_name: Bacillus pacificus


asm_submitter: COMSATS University Islamabad, Abbottabad campus

organism_name: Pseudomonas entomophila


asm_submitter: Zhejiang University

organism_name: Providencia hangzhouensis


asm_submitter: Universidad de Concepcion

organism_name: Klebsiella pneumoniae


asm_submitter: Nicolaus Copernicus University in Torun

organism_name: Agrobacterium sp. Azo12


asm_submitter: University of Innsbruck

organism_name: Aquirufa ecclesiirivi


asm_submitter: National Center for Biotechnology Information


asm_submitter: Insititute of Oceanology, Chinese Academy of Sciences

organism_name: Cytobacillus sp. S13-E01


asm_submitter: Jiangsu Academy of Agricultural Sciences

organism_name: Bacillus velezensis


organism_name: Flagellimonas yonaguniensis


organism_name: Flagellimonas okinawensis


asm_submitter: Northeast Agricultural University

organism_name: Rhizobium sp. BC49


asm_submitter: Hangzhou Medical University


organism_name: Rhizobium mulingense


asm_submitter: the Affiliated Hospital of Yangzhou University

organism_name: Acinetobacter baumannii


asm_submitter: Central south university

organism_name: Acinetobacter nosocomialis


asm_submitter: Dongguk university

organism_name: Kaistella sp. PBT33-4


asm_submitter: Jinan University

organism_name: Candidatus Nitrosocosmicus sp.


organism_name: Nitrosomonas sp.


organism_name: Nitrospira sp.


asm_submitter: San Raffaele Scientific Institute

organism_name: Escherichia coli


asm_submitter: Laboratoire Bacteriologie, hopital bicetre


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


asm_submitter: CDC

organism_name: Salmonella enterica


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: FDA


organism_name: Shigella flexneri


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


asm_submitter: FDA Center for Food Safety and Applied Nutrition


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


asm_submitter: Center for Food Safety and Applied Nutrition


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Worthington


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


asm_submitter: Institute of Microbiology

organism_name: Mycoplasmopsis bovis


asm_submitter: USDA-ARS

organism_name: Enterococcus casseliflavus


asm_submitter: Beijing university of technology

organism_name: Pseudomonas aeruginosa


asm_submitter: xinjiang normal university

organism_name: Bacillus cereus


asm_submitter: University of Zurich

organism_name: Proteus mirabilis


asm_submitter: University of Washington Laboratory Medicine

organism_name: Treponema pallidum subsp. pallidum


asm_submitter: University of Tennessee, Knoxville

organism_name: Pseudomonas sp. 273


asm_submitter: Third Institute Of Oceanography

organism_name: Thiomicrorhabdus lithotrophica


asm_submitter: Public Health Ontario

organism_name: Klebsiella pneumoniae


organism_name: Escherichia coli


asm_submitter: Academy of National Food and Stragetic Reserves Administration

organism_name: Devosia sp. FJ2-5-3


organism_name: Devosia sp. SD17-2


organism_name: Pseudomonas sp. SD17-1


organism_name: Pseudomonas sp. FJ2-5-13


asm_submitter: University of Manitoba

organism_name: Sinorhizobium prairiense


asm_submitter: Leibniz-Institut DSMZ - German Collection of Microorganisms and Cell Cultures GmbH

organism_name: Kluyvera intermedia


organism_name: Klebsiella huaxiensis


organism_name: Candidatus Sphingomonas phytovorans


organism_name: Candidatus Devosia phytovorans


excluded_from_refseq: unverified source organism; annotation fails MAG completeness check; derived from metagenome; not used as type

organism_name: Candidatus Pseudomonas colombiensis


organism_name: Candidatus Microbacterium phytovorans


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; missing tRNA genes

organism_name: Ochrobactrum gambitense (SeqCode)


organism_name: Candidatus Pedobacter colombiensis


isolate: MAG 426

organism_name: Pseudomonas protegens


organism_name: Candidatus Pseudomonas phytovorans


organism_name: Candidatus Brevundimonas colombiensis


organism_name: Escherichia coli


organism_name: Candidatus Sphingomonas colombiensis


organism_name: Candidatus Andeanibacterium colombiense


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Candidatus Kaistia colombiensis


organism_name: Candidatus Cohnella colombiensis


organism_name: Candidatus Brevundimonas phytovorans


organism_name: Candidatus Microbacterium colombiense


organism_name: Candidatus Chryseobacterium colombiense


asm_submitter: Wanzhou CDC

organism_name: Klebsiella pneumoniae


asm_submitter: Chinese Academy of Fishery Sciences

organism_name: Vibrio alginolyticus


organism_name: Treponema pallidum subsp. pallidum


asm_submitter: Fujian Agriculture and Forestry University

organism_name: Pseudomonas sp. PSE14


asm_submitter: Newcastle University

organism_name: Mycoplasma sp.


asm_submitter: National Science and Technology Development Agency (NSTDA)

organism_name: Streptococcus suis


asm_submitter: University of Warsaw, Faculty of Biology, Institute of Microbiology

organism_name: Paracoccus versutus


asm_submitter: Wuhan Kernel Bio-tech Co., Ltd

organism_name: Paenibacillus polymyxa


asm_submitter: Zhejiang University

organism_name: Staphylococcus aureus


asm_submitter: Institut de Recherche pour le Developpement

organism_name: Xanthomonas oryzae pv. oryzae


asm_submitter: FDA Center for Food Safety and Applied Nutrition

organism_name: Escherichia coli


asm_submitter: CDC


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


asm_submitter: Centers for Disease Control and Prevention


asm_submitter: University of Sevilla, Spain

organism_name: Marinobacter iranensis


asm_submitter: UCIBIO/REQUIMTE, Faculty of Pharmacy, University of Porto

organism_name: Gardnerella greenwoodii


annotation_name: Annotation submitted by Seoul National University

annotation_provider: Seoul National University

asm_submitter: Seoul National University

organism_name: Enterobacter hormaechei


annotation_name: Annotation submitted by Consiglio nazionale delle ricerche

annotation_provider: Consiglio nazionale delle ricerche

asm_submitter: Consiglio nazionale delle ricerche

organism_name: Halorhabdus sp. SVX81


infraspecific_name: strain=SVXNc

organism_name: Candidatus Nanohalococcus occultus


asm_submitter: Vanderbilt University Medical Center


excluded_from_refseq: contaminated; from large multi-isolate project


asm_submitter: University of Southern California

excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Parvibaculaceae bacterium


organism_name: Vicingaceae bacterium


organism_name: Coxiellaceae bacterium


organism_name: Cycloclasticus sp.


organism_name: Legionellaceae bacterium


excluded_from_refseq: derived from metagenome

organism_name: Thalassolituus oleivorans


organism_name: Pseudomonadales bacterium


organism_name: Alcanivorax sp.


organism_name: Ponticaulis sp.


organism_name: Minwuia sp.


organism_name: Verrucomicrobiales bacterium


organism_name: Planctomycetota bacterium


organism_name: Alcanivorax jadensis


organism_name: Patescibacteria group bacterium


asm_submitter: Christian Medical College

organism_name: Pseudomonas aeruginosa


organism_name: Alcanivoracaceae bacterium


asm_submitter: Yunnan University

infraspecific_name: strain=YIM 152430

organism_name: Mesorhizobium sp. YIM 152430


infraspecific_name: strain=YIM 152315

organism_name: Nocardioides sp. YIM 152315


asm_submitter: Research Center of Biotechnology RAS

organism_name: Desulfurivibrio dismutans


organism_name: Petrocella sp. FN5


organism_name: Pseudohongiella nitratireducens


organism_name: Stygiobacter electus


infraspecific_name: strain=YIM 152468

organism_name: Hoeflea sp. YIM 152468


asm_submitter: Hohai University

infraspecific_name: strain=MCCC 1A06955

organism_name: Pseudothioclava nitratireducens


asm_submitter: Shanghai Academy of Landscape Architecture Science and Planning

organism_name: Mycoplana sp. MJR14


organism_name: bacterium


organism_name: Bacteroidales bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Anaerolineae bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Anaerosomatales bacterium


organism_name: Desulfobulbales bacterium


organism_name: ANME-2 cluster archaeon


organism_name: Acidimicrobiia bacterium


organism_name: Desulfuromonadales bacterium


organism_name: Methyloprofundus sp.


organism_name: Patescibacteria group bacterium


organism_name: Candidatus Thorarchaeota archaeon


organism_name: Candidatus Brevefilum sp.


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Lutibacter sp.


organism_name: Trueperaceae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Anaerolineales bacterium


organism_name: bacterium


organism_name: Spirochaetaceae bacterium


organism_name: Sedimenticola sp.


organism_name: Methanosarcinaceae archaeon


organism_name: Desulfobacterales bacterium


organism_name: Deferrisomatales bacterium


asm_submitter: Chinese Academy of Sciences

organism_name: Curvibacter soli


infraspecific_name: strain=YIM 152171

organism_name: Marinimicrococcus flavescens


organism_name: Roseisolibacter sp. H3M3-2


organism_name: Tessaracoccus caeni


asm_submitter: Sichuan University of Science & Engineering

organism_name: Caproiciproducens sp. CPB-2


organism_name: Antiquaquibacter metalliresistens


asm_submitter: University of Chicago

organism_name: Robertmurraya sp. DFI.2.37


organism_name: Extensimonas soli


asm_submitter: Centre of Excellence for Biosensors, Instrumentation and Process control

organism_name: Staphylococcus epidermidis


organism_name: Caproicibacterium argilliputei


excluded_from_refseq: from large multi-isolate project

organism_name: Escherichia coli


asm_submitter: Sandia National Laboratories

organism_name: Bacillus safensis


organism_name: Thalassolituus sp.


organism_name: Verrucomicrobiales bacterium


organism_name: Minwuia sp.


organism_name: Roseovarius sp.


organism_name: Zhongshania sp.


organism_name: Saprospiraceae bacterium


organism_name: Rhizobiaceae bacterium


organism_name: Phycisphaerales bacterium


organism_name: Legionellaceae bacterium


organism_name: Vicingaceae bacterium


organism_name: Akkermansiaceae bacterium


organism_name: Pseudophaeobacter sp. bin_em_oilr2.035


organism_name: Gammaproteobacteria bacterium


organism_name: Antarcticimicrobium sp.


organism_name: Cycloclasticus pugetii


organism_name: Vannielia sp.


organism_name: Hyphomonas sp.


excluded_from_refseq: unverified source organism; derived from metagenome


organism_name: Sulfitobacter sp.


organism_name: Maricaulis sp.


organism_name: Alcanivoracaceae bacterium


organism_name: Paracoccaceae bacterium


organism_name: Thalassobaculaceae bacterium


organism_name: Litorivicinaceae bacterium


organism_name: Gimesia sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Planctomycetota bacterium


organism_name: Coxiellaceae bacterium


organism_name: Thalassovita sp.


organism_name: Immundisolibacteraceae bacterium


organism_name: Porticoccaceae bacterium


organism_name: Verrucomicrobiales bacterium


organism_name: Legionellaceae bacterium


organism_name: Aeromicrobium sp.


organism_name: Rubripirellula sp.


organism_name: Minwuia sp.


organism_name: Parvibaculaceae bacterium


organism_name: Pseudooceanicola sp.


organism_name: Saprospiraceae bacterium


organism_name: Candidatus Pelagibacter sp.


organism_name: Phycisphaerales bacterium


asm_submitter: CDC

organism_name: Salmonella enterica


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Altona


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Manhattan


organism_name: Salmonella enterica subsp. enterica serovar Worthington


organism_name: Salmonella enterica subsp. enterica serovar Give


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


organism_name: Escherichia coli


organism_name: Klebsiella pneumoniae


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Pseudomonas aeruginosa


organism_name: Shigella flexneri


organism_name: Salmonella enterica


asm_submitter: National Center for Biotechnology Information


asm_submitter: Umea university

organism_name: Pseudomonas sp. CBSPBW29


asm_submitter: USDA-ARS

organism_name: Enterococcus casseliflavus


asm_submitter: QiQiHaEr university

organism_name: Bacillus velezensis


asm_submitter: Nanjing Agricultural University

organism_name: Pseudomonas kermanshahensis


asm_submitter: Huazhong Agricultural University


organism_name: Pseudomonas sp. CBSPGW29


organism_name: Pseudomonas sp. CBSPCGW29


organism_name: Pseudomonas sp. CBSPAW29


asm_submitter: IBPM RAS

organism_name: Delftia tsuruhatensis


organism_name: Pseudomonas sp. CBSPCAW29


organism_name: Pseudomonas sp. CBSPCBW29


asm_submitter: SRM Institute of Science and Technology

organism_name: Tsukamurella tyrosinosolvens


asm_submitter: The Third Institute of Oceanography, Ministry of Natural Resources

excluded_from_refseq: derived from single cell

infraspecific_name: strain=SAG AH-194-I05

organism_name: Sulfurimonas sp. SAG-AH-194-I05


infraspecific_name: strain=SAG AH-194-C20

organism_name: Sulfurimonas sp. SAG-AH-194-C20


infraspecific_name: strain=SAG AH-194-C21

organism_name: Sulfurimonas sp. SAG-AH-194-C21


infraspecific_name: strain=SAG AH-194-L11

organism_name: Sulfurimonas sp. SAG-AH-194-L11


asm_submitter: Shanghai Pulmonary Hospital, School of Medicine, Tongji University

organism_name: Staphylococcus aureus


organism_name: Sulfurimonas sp. MAG313


organism_name: Campylobacter jejuni


asm_submitter: Public Health England

organism_name: Yersinia enterocolitica


asm_submitter: FDA Center for Food Safety and Applied Nutrition

organism_name: Listeria monocytogenes


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar London


asm_submitter: Center for Food Safety and Applied Nutrition


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Klebsiella pneumoniae


isolate: strain


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


asm_submitter: University of Trento

organism_name: Neopoerus faecalis


asm_submitter: Agriculture and Agri-Food Canada

organism_name: Treponema porcinum


organism_name: bacterium


organism_name: Solobacterium sp.


organism_name: Lactobacillus sp.


organism_name: Bacteroidales bacterium


organism_name: Prevotellaceae bacterium


organism_name: Eubacteriales bacterium


organism_name: Clostridiaceae bacterium


organism_name: Bacillota bacterium


organism_name: Clostridiales bacterium


organism_name: Prevotella sp.


organism_name: Dialister histaminiformans


organism_name: Subdoligranulum sp.


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Megasphaera elsdenii


organism_name: Collinsella sp.


organism_name: Lachnospiraceae bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Clostridia bacterium


organism_name: Veillonellaceae bacterium


organism_name: Spirochaetales bacterium


organism_name: Paraprevotella sp.


organism_name: Solobacterium sp.


organism_name: Bacteroidales bacterium


organism_name: Prevotellaceae bacterium


organism_name: Akkermansia muciniphila


organism_name: Bacillota bacterium


organism_name: Thermobifida fusca


organism_name: Clostridiaceae bacterium


organism_name: Lachnospira sp.


organism_name: Mollicutes bacterium


organism_name: Eggerthellales bacterium


organism_name: Methanobacteriaceae archaeon


organism_name: Coriobacteriaceae bacterium


organism_name: bacterium


organism_name: Clostridiales bacterium


organism_name: Turicibacter sp.


organism_name: Inconstantimicrobium porci


organism_name: Succinatimonas sp.


organism_name: Paludibacteraceae bacterium


organism_name: Prevotella sp.


organism_name: Bacteroidales bacterium


organism_name: Segatella copri


organism_name: Roseburia porci


organism_name: Lachnospiraceae bacterium


organism_name: Eubacteriales bacterium


organism_name: Eggerthellaceae bacterium


asm_submitter: INRAE

organism_name: Ralstonia syzygii


organism_name: Ralstonia syzygii R24


organism_name: Ralstonia solanacearum MolK2


organism_name: Ralstonia solanacearum


organism_name: Ralstonia solanacearum CFBP2957


organism_name: Ralstonia pseudosolanacearum


asm_submitter: Institute of Zoology, Chinese Academy of Sciences

organism_name: Prescottella equi


organism_name: Escherichia coli


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


asm_submitter: US Food and Drug Administration

organism_name: Salmonella enterica


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: CDC


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Berta


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Worthington


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Brandenburg


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Bovismorbificans


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Rissen


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar London


asm_submitter: Aberystwyth University

organism_name: Mycolicibacterium smegmatis


asm_submitter: Virginia Tech

organism_name: Legionella pneumophila


asm_submitter: KU Leuven

excluded_from_refseq: genome length too small

organism_name: Martinezella rhizogenes


asm_submitter: ENCB-IPN

organism_name: Rahnella contaminans


infraspecific_name: strain=ATCC 19420


asm_submitter: Hangzhou Medical University

organism_name: Klebsiella pneumoniae


organism_name: Klebsiella quasivariicola


asm_submitter: Aristotle University of Thessaloniki

organism_name: Priestia megaterium


organism_name: Peribacillus frigoritolerans


organism_name: Bacillus pumilus


organism_name: Microbacterium sp. Kw_RZR3


organism_name: Bacillus sp. Cr_R3


organism_name: Pantoea sp. Cr_R21


organism_name: Pantoea sp. Cr_R14


organism_name: Bacillus sp. Cr_R16


organism_name: Pantoea sp. Cr_R13


organism_name: Bacillus pseudomycoides


organism_name: Ectopseudomonas mendocina


organism_name: Cytobacillus oceanisediminis


organism_name: Bacillus sp. Cr_A10


asm_submitter: Chinese Academy of Sciences

organism_name: Terripilifer ovatus


asm_submitter: institute of microbiology, chinese academy of sciences

organism_name: Knoellia sp. p5-6-4


asm_submitter: Christian Medical College

organism_name: Escherichia coli


organism_name: Arthrobacter sp. Cr_A7


asm_submitter: Chung-Ang University

infraspecific_name: strain=CAU 1671

organism_name: Neptuniibacter sp. CAU 1671


infraspecific_name: strain=CAU 1675

organism_name: Algoriphagus sp. CAU 1675


infraspecific_name: strain=CAU 1674

organism_name: Paenirhodobacter sp. CAU 1674


infraspecific_name: strain=CAU 1616

organism_name: Aquibaculum arenosum


asm_submitter: Erciyes University

organism_name: Campylobacter jejuni


asm_submitter: Centers for Disease Control and Prevention

organism_name: Clostridioides difficile


asm_submitter: CJ Bioscience

organism_name: Cutibacterium acnes subsp. defendens


asm_submitter: Central Research Institute of Epidemiology

organism_name: Klebsiella pneumoniae


asm_submitter: NCell

organism_name: Limnospira platensis NCB002


organism_name: Knoellia sp. 3-2P3


infraspecific_name: strain=CAU 1673

organism_name: Aliiglaciecola sp. CAU 1673


infraspecific_name: strain=CAU 1672

organism_name: Vibrio sp. CAU 1672


asm_submitter: Southwest University

infraspecific_name: strain=SCMS

organism_name: Aeromonas caviae


infraspecific_name: strain=CAU 1670

organism_name: Albimonas marina


infraspecific_name: strain=CAU 1676

organism_name: Paraflavitalea sp. CAU 1676


asm_submitter: CDC

organism_name: Grimontia hollisae


asm_submitter: Kasetsart University

infraspecific_name: strain=JCM 17138

organism_name: Streptomyces coacervatus


organism_name: Pseudomonas aeruginosa


infraspecific_name: strain=JCM 14344

organism_name: Streptantibioticus ferralitis


annotation_name: Annotation submitted by Soochow University

annotation_provider: Soochow University

asm_submitter: Soochow University

organism_name: Thauera sp. GDN1


asm_submitter: University of Birmingham

organism_name: Acinetobacter baumannii


asm_submitter: Fourth Institute of Oceanography, Ministry of natural resources

organism_name: Photobacterium sp. DA100


annotation_name: Annotation submitted by Norwegian Defence Research Establishment

infraspecific_name: strain=MRE162 substr. NOR

organism_name: Escherichia coli


annotation_provider: Norwegian Defence Research Establishment

infraspecific_name: strain=MRE162 substr. FRA


asm_submitter: Norwegian Defence Research Establishment

infraspecific_name: strain=MRE162 substr. UK


asm_submitter: Pukyong National University

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Streptococcus parauberis


asm_submitter: FDA

infraspecific_name: strain=CVM 46270

organism_name: Salmonella enterica subsp. enterica serovar Newport


infraspecific_name: strain=CVM 46269


infraspecific_name: strain=CVM 46268


infraspecific_name: strain=CVM 46267


infraspecific_name: strain=CVM 46266

organism_name: Salmonella enterica subsp. enterica serovar Infantis


infraspecific_name: strain=CVM 46265

organism_name: Salmonella enterica subsp. enterica serovar Anatum


asm_submitter: University of Tuebingen

infraspecific_name: strain=ACM 1762

organism_name: Telluria mixta


asm_submitter: Hunan Agricultural University

organism_name: Pararhizobium gei


asm_submitter: Academia Sinica

organism_name: Agrobacterium fabrum


asm_submitter: Korea University

organism_name: Limosilactobacillus fermentum


asm_submitter: Zhongkai University of Agriculture and Engineering

organism_name: Klebsiella pneumoniae


organism_name: Paenarthrobacter sp. Y-19


asm_submitter: Sichuan Agriculture University

organism_name: Pasteurella multocida


asm_submitter: Shanghai Jiao Tong University

organism_name: Rhodanobacter sp. AS-Z3


asm_submitter: Qilu University of Technology

organism_name: Vibrio furnissii


asm_submitter: Lanzhou Institute of Husbandry and Pharmaceutical Sciences, Chinese Academy of Agricultural Science


asm_submitter: FDA/CFSAN

organism_name: Cronobacter malonaticus


asm_submitter: Vilnius University

organism_name: Latilactobacillus curvatus


asm_submitter: Peking University Third Hospital


asm_submitter: Agriculture and Agri-Food Canada

organism_name: Bacteroidales bacterium


organism_name: Clostridiales bacterium


organism_name: Lactobacillus porci


organism_name: Oscillospiraceae bacterium


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Lactimicrobium massiliense


organism_name: Bacillota bacterium


organism_name: Ruminococcus sp.


organism_name: Eubacterium pyruvativorans


organism_name: Olsenella sp.


organism_name: Sharpea porci


organism_name: Clostridiaceae bacterium


organism_name: Subdoligranulum sp.


organism_name: Mogibacterium kristiansenii


asm_submitter: Institut de Recherche pour le Developpement

organism_name: Xanthomonas oryzae pv. oryzae


organism_name: Veillonellaceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Clostridium sp.


organism_name: Sodaliphilus pleomorphus


organism_name: Galactobacillus timonensis


organism_name: Eubacteriales bacterium


organism_name: Bacteroidales bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Lactimicrobium massiliense


organism_name: Prevotella sp.


organism_name: Eubacterium coprostanoligenes


organism_name: Bulleidia sp.


organism_name: Eggerthellales bacterium


organism_name: Treponema sp.


organism_name: Subdoligranulum variabile


organism_name: Bacillota bacterium


organism_name: Erysipelotrichaceae bacterium


organism_name: Lachnobacterium sp.


organism_name: Lachnospiraceae bacterium


organism_name: Coriobacteriaceae bacterium


organism_name: Ruminococcus sp.


organism_name: Faecalibacterium sp.


organism_name: Bacteroides sp.


organism_name: Clostridium sp.


organism_name: Eubacteriales bacterium


organism_name: Bacteroidales bacterium


organism_name: Clostridiales bacterium


asm_submitter: Microbiological Diagnostics Unit

organism_name: Salmonella enterica


organism_name: Paraprevotella sp.


organism_name: Oscillospiraceae bacterium


organism_name: Parafannyhessea umbonata


organism_name: Galactobacillus timonensis


asm_submitter: Consiglio nazionale delle ricerche

organism_name: Haloferax volcanii


organism_name: Anaerovibrio sp.


organism_name: Catenibacterium mitsuokai


organism_name: Lachnospiraceae bacterium


organism_name: Prevotella sp.


organism_name: Anaerobutyricum hallii


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; genome length too small

organism_name: Gemmiger formicilis


organism_name: Acidaminococcus sp.


organism_name: Fusicatenibacter saccharivorans


organism_name: Thermoflexaceae bacterium


organism_name: Veillonellaceae bacterium


organism_name: Lactimicrobium massiliense


organism_name: Faecalibacterium prausnitzii


organism_name: Collinsella sp.


organism_name: Prevotellaceae bacterium


organism_name: Bacteroidales bacterium


organism_name: Blautia massiliensis (ex Durand et al. 2017)


organism_name: Pseudomonadota bacterium


organism_name: Bacillota bacterium


asm_submitter: UCIBIO/REQUIMTE, Faculty of Pharmacy, University of Porto

organism_name: Gardnerella pickettii


asm_submitter: Utah Public Health Laboratory Infectious Disease submission group

organism_name: Enterobacter hormaechei


organism_name: Clostridiales bacterium


organism_name: Methanosphaera sp.


organism_name: Ruminococcus sp.


organism_name: Klebsiella oxytoca


organism_name: Prevotella sp.


organism_name: Segatella copri


organism_name: Gemmiger formicilis


organism_name: Oscillospiraceae bacterium


organism_name: Oribacterium sp.


organism_name: Subdoligranulum sp.


organism_name: Prevotellaceae bacterium


organism_name: Sharpea azabuensis


organism_name: Lachnospiraceae bacterium


organism_name: Bacteroidales bacterium


organism_name: Solobacterium sp.


organism_name: Leyella stercorea


organism_name: Bacillota bacterium


organism_name: Clostridia bacterium


organism_name: Clostridiales bacterium


organism_name: Clostridium sp.


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Meleagridis


organism_name: Spirochaetales bacterium


organism_name: Eubacteriales bacterium


organism_name: Bacilli bacterium


organism_name: Sodaliphilus pleomorphus


organism_name: Erysipelotrichaceae bacterium


excluded_from_refseq: contaminated; unverified source organism; annotation fails MAG completeness check; derived from metagenome

organism_name: Butyricicoccus sp.


organism_name: Bifidobacteriaceae bacterium


organism_name: Clostridiaceae bacterium


organism_name: Coprococcus sp.


organism_name: Absicoccus porci


organism_name: Lactimicrobium massiliense


organism_name: Lachnospiraceae bacterium


organism_name: Lactobacillus sp.


organism_name: Holdemanella porci


organism_name: Ruminococcus sp.


organism_name: Collinsella sp.


organism_name: Ruminococcus bromii


organism_name: Gemmiger formicilis


organism_name: Prevotella sp.


organism_name: Lactobacillaceae bacterium


organism_name: Subdoligranulum variabile


organism_name: Clostridiales bacterium


organism_name: bacterium


organism_name: Intestinibaculum porci


organism_name: Clostridium sp.


organism_name: Paratractidigestivibacter faecalis


organism_name: Blautia sp.


asm_submitter: China National Centre for Food Safety Risk Assessment

organism_name: Cronobacter dublinensis subsp. beijingensis


organism_name: Cronobacter dublinensis subsp. infanticibi


asm_submitter: Shanghai Ocean University

excluded_from_refseq: genus undefined

organism_name: Clostridiaceae bacterium M8S5


organism_name: Escherichia coli


asm_submitter: Center for Food Safety and Applied Nutrition

organism_name: Salmonella enterica


asm_submitter: CDC

organism_name: Vibrio alginolyticus


organism_name: Listeria monocytogenes


organism_name: Vibrio parahaemolyticus


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Cronobacter dublinensis


asm_submitter: Woods Hole Oceanographic Institution


asm_submitter: Zhejiang provincial center for disease control and prevention


asm_submitter: Chinese Center of Disease Control and Prevention

organism_name: Lactiplantibacillus pentosus


organism_name: Salmonella enterica subsp. enterica serovar Give


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar Hadar


asm_submitter: Worcester Polytechnic Institute

infraspecific_name: strain=NCIB 8034

organism_name: Komagataeibacter oboediens


organism_name: Novacetimonas hansenii


organism_name: Komagataeibacter nataicola


asm_submitter: USDA FSIS


organism_name: Campylobacter jejuni


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Escherichia coli


organism_name: Acinetobacter baumannii


asm_submitter: FDA/CFSAN

organism_name: Cronobacter sakazakii


organism_name: Halorhabdus sp. BNX81


organism_name: Salmonella enterica


organism_name: Shigella flexneri


organism_name: Campylobacter upsaliensis


asm_submitter: FDA Center for Food Safety and Applied Nutrition


organism_name: Klebsiella pneumoniae


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Alachua


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


asm_submitter: Consiglio nazionale delle ricerche

infraspecific_name: strain=BNXNv


organism_name: Haloferax volcanii


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Pseudomonas aeruginosa


organism_name: Escherichia coli


organism_name: Shigella sonnei


asm_submitter: NWAFU

organism_name: Clostridium perfringens


asm_submitter: University of Southern California

organism_name: Rhizobiaceae bacterium


organism_name: Sneathiella sp.


organism_name: Verrucomicrobiales bacterium


organism_name: Candidatus Altimarinota bacterium


annotation_name: Annotation submitted by Houston Methodist Research Institute

annotation_provider: Houston Methodist Research Institute

asm_submitter: Houston Methodist Research Institute

organism_name: Streptococcus dysgalactiae subsp. equisimilis


organism_name: Campylobacter jejuni


organism_name: Campylobacter lari


organism_name: Acinetobacter baumannii


organism_name: Salmonella enterica


organism_name: Shigella flexneri


asm_submitter: FDA


organism_name: Klebsiella pneumoniae


isolate: Key


organism_name: Campylobacter coli


asm_submitter: Indian Institute of Science Education and Research Kolkata

excluded_from_refseq: contaminated

infraspecific_name: strain=NOK

organism_name: Nostoc ellipsosporum NOK


asm_submitter: Institute of Marine research

organism_name: Aeromonas sp. 5HA1


organism_name: Pseudomonas sp. 3MA1


organism_name: Aeromonas sp. 2MA4


organism_name: Morganella morganii


organism_name: Aeromonas sp. 2HA2


organism_name: Acinetobacter beijerinckii


organism_name: Aeromonas sp. 1HA1


asm_submitter: University of Florida

organism_name: Nitrososphaerales archaeon


asm_submitter: BGI-Shenzhen

organism_name: Hoskinsella hominis


organism_name: Oliverpabstia intestinalis


asm_submitter: Institute of Oceanology, Chinese Academy of Sciences

organism_name: Candidatus Thiodubiliella sp.


annotation_name: Annotation submitted by Colorado State University

annotation_provider: Colorado State University

asm_submitter: Colorado State University

organism_name: Mucilaginibacter sp.


organism_name: Abditibacteriota bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Subtercola sp.


organism_name: Cytophagaceae bacterium


organism_name: Nitrospira sp.


organism_name: Ramlibacter sp.


organism_name: Candidatus Saccharimonadota bacterium


organism_name: Bacteroidota bacterium


organism_name: Moraxellaceae bacterium


asm_submitter: Universidad Andres Bello

organism_name: Bacteroidia bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Thalassotalea sp.


organism_name: Paracoccaceae bacterium


organism_name: SAR86 cluster bacterium


organism_name: Emcibacteraceae bacterium


organism_name: Saprospiraceae bacterium


organism_name: Woeseiaceae bacterium


organism_name: Flavobacteriales bacterium


organism_name: Schleiferiaceae bacterium


organism_name: Lacinutrix sp.


organism_name: Luminiphilus sp.


organism_name: Henriciella sp.


organism_name: Methylophilaceae bacterium


organism_name: Aquiluna sp.


organism_name: Porticoccaceae bacterium


organism_name: Glaciecola sp.


organism_name: Polaribacter sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Pirellulaceae bacterium


organism_name: Paracoccaceae bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Flavicella sp.


organism_name: Crocinitomicaceae bacterium


organism_name: Oceanicoccus sp.


organism_name: Ilumatobacter sp.


organism_name: Yoonia sp.


organism_name: Flavobacteriales bacterium


asm_submitter: San Francisco State University

isolate: wEsol

organism_name: Wolbachia pipientis


organism_name: Caryophanales bacterium


organism_name: Clostridia bacterium


organism_name: Herbinix sp.


organism_name: Clostridiales bacterium


organism_name: Enterobacter mori


organism_name: Sphingobacterium sp.


organism_name: Clostridium sp.


organism_name: Microbacterium sp.


organism_name: Anaerosporomusa subterranea


organism_name: Arthrobacter koreensis


organism_name: Sphingomonas sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly


organism_name: Pseudomonas sp.


organism_name: Anaerocolumna sp.


organism_name: Stenotrophomonas indicatrix


organism_name: Rhodococcus erythropolis


organism_name: Paenibacillus sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Bacillota bacterium


organism_name: Pelosinus sp.


excluded_from_refseq: derived from metagenome

organism_name: Novosphingobium lindaniclasticum


organism_name: Clostridia bacterium


organism_name: Sedimentibacter sp.


organism_name: Symbiobacteriaceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Kosakonia cowanii


organism_name: Caryophanales bacterium


organism_name: Xanthobacteraceae bacterium


organism_name: Methylobacterium brachiatum


organism_name: Sphingomonas sp.


organism_name: Mycobacterium sp.


organism_name: Oscillospiraceae bacterium


organism_name: Microbacterium sp.


organism_name: Anaerosinus sp.


organism_name: Chlamydiales bacterium


organism_name: Sporomusa sp.


organism_name: Agromyces sp.


organism_name: Anaerosolibacter sp.


organism_name: Chryseobacterium sp.


organism_name: Herbinix sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Pseudomonas orientalis


organism_name: Pantoea eucrina


organism_name: Neobacillus sp.


organism_name: Enterobacteriaceae bacterium


organism_name: Thermomicrobiales bacterium


organism_name: Nitrososphaeraceae archaeon


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Geminicoccaceae bacterium


organism_name: Rhodospirillales bacterium


organism_name: Gaiellaceae bacterium


organism_name: Propionibacteriaceae bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Desertimonas sp.


organism_name: Nitrospira sp.


organism_name: Actinomycetes bacterium


organism_name: Chloroflexota bacterium


organism_name: Nitrososphaera sp.


organism_name: Acidimicrobiia bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Paenibacillus sp.


organism_name: Rubrobacteraceae bacterium


organism_name: Haloplasmataceae bacterium


organism_name: Brevibacillus sp.


organism_name: Nonomuraea muscovyensis


organism_name: Clostridia bacterium


organism_name: Microvirga sp.


organism_name: Caproiciproducens sp.


organism_name: Labilithrix sp.


organism_name: Clostridiales bacterium


organism_name: Pseudomonas sp.


asm_submitter: CDC

excluded_from_refseq: from large multi-isolate project

organism_name: Salmonella enterica


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Pseudomonas aeruginosa


asm_submitter: Leibniz Institute of Freshwater Ecology and Inland Fisheries

organism_name: Candidatus Nitrosopumilus sp.


asm_submitter: Sun Yat-Sen University

organism_name: Desulfobacteraceae bacterium


organism_name: Acinetobacter baumannii


organism_name: Candidatus Methanophagales archaeon


organism_name: Crocinitomicaceae bacterium


organism_name: Aquiluna sp.


organism_name: Flavobacteriaceae bacterium


organism_name: Porticoccaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: SAR86 cluster bacterium


organism_name: Paracoccaceae bacterium


organism_name: Bacteroidia bacterium


organism_name: Planktomarina sp.


organism_name: Pirellulaceae bacterium


organism_name: Luminiphilus sp.


organism_name: Phycisphaerales bacterium


organism_name: Thermodesulfobacteriota bacterium


organism_name: Roseibacillus sp.


organism_name: Saprospiraceae bacterium


organism_name: Ilumatobacter sp.


organism_name: Flavobacterium sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Acidimicrobiales bacterium


organism_name: Flavobacteriales bacterium


organism_name: Candidatus Pelagibacterales bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Hyphomicrobiales bacterium


organism_name: Halioglobus sp.


organism_name: Pirellulales bacterium


organism_name: Amylibacter sp.


organism_name: Paracoccaceae bacterium


organism_name: Akkermansiaceae bacterium


organism_name: Polaribacter sp.


organism_name: Woeseiaceae bacterium


organism_name: Pirellulaceae bacterium


organism_name: Fidelibacterota bacterium


organism_name: Thalassotalea sp.


organism_name: Candidatus Thioglobus sp.


organism_name: Tateyamaria sp.


organism_name: Planctomycetaceae bacterium


organism_name: Flavobacteriales bacterium


organism_name: Methylococcaceae bacterium


organism_name: Hellea sp.


organism_name: Flavobacteriaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Binatia bacterium (SeqCode)


organism_name: Gammaproteobacteria bacterium


organism_name: Synechococcus sp. cluster2_bin.44


organism_name: Halioglobus sp.


organism_name: Rhodospirillaceae bacterium


organism_name: Myxococcota bacterium


organism_name: Polaribacter sp.


organism_name: Acidimicrobiales bacterium


organism_name: Cytophagales bacterium


organism_name: Opitutia bacterium


organism_name: SAR86 cluster bacterium


organism_name: Paracoccaceae bacterium


organism_name: Planctomycetota bacterium


organism_name: Flavobacteriales bacterium


organism_name: Longimicrobiales bacterium


organism_name: Phycisphaerales bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Methylophilaceae bacterium


organism_name: Actinomycetota bacterium


organism_name: Escherichia coli


organism_name: Salmonella enterica