organism_name: Enterobacter ludwigii


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: CDC

assembly_level: Contig

assembly_type: haploid

excluded_from_refseq: from large multi-isolate project

genome_rep: Full

group: bacteria

organism_name: Vibrio parahaemolyticus

release_type: Major

version_status: latest


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


organism_name: Shigella sonnei


asm_submitter: Banfield Lab, University of California, Berkeley

assembly_level: Scaffold

excluded_from_refseq: derived from metagenome

organism_name: Pseudomonas aeruginosa


organism_name: Cutibacterium avidum


organism_name: Klebsiella pneumoniae


organism_name: Escherichia coli


organism_name: Veillonella sp.

paired_asm_comp: identical


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Clostridium sp.


organism_name: Salmonella enterica


excluded_from_refseq: contaminated; derived from metagenome


excluded_from_refseq: unverified source organism; derived from metagenome; fragmented assembly

organism_name: Staphylococcus sp.


organism_name: Clostridioides difficile


organism_name: Streptococcus salivarius


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome


organism_name: Shigella flexneri


organism_name: Enterocloster bolteae


organism_name: Klebsiella oxytoca


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Klebsiella sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small


organism_name: Varibaculum cambriense


organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


organism_name: Haemophilus parainfluenzae


organism_name: Staphylococcus epidermidis


organism_name: Pseudomonas aeruginosa


organism_name: Cutibacterium sp.


organism_name: Citrobacter freundii


organism_name: Clostridium sp.


organism_name: Salmonella enterica


organism_name: Enterococcus faecium


organism_name: Veillonella sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Clostridiales bacterium


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Ohio


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


organism_name: Enterococcus avium


organism_name: Klebsiella michiganensis


organism_name: Clostridium perfringens


organism_name: Enterococcus faecalis


organism_name: Clostridium butyricum


organism_name: Escherichia coli


organism_name: Bacteroides caccae


organism_name: Klebsiella variicola


organism_name: Cutibacterium avidum


organism_name: Salmonella enterica


organism_name: Pseudomonas aeruginosa


organism_name: Serratia marcescens


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Actinomyces sp.


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Haemophilus parainfluenzae


organism_name: Streptococcus anginosus


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Bifidobacterium longum


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Thompson


organism_name: Salmonella enterica subsp. enterica serovar Muenster


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Staphylococcus epidermidis


organism_name: Staphylococcus warneri


organism_name: Salmonella enterica subsp. enterica serovar Barranquilla


organism_name: Clostridium butyricum


organism_name: Clostridium sp.


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Pseudomonas aeruginosa


organism_name: Clostridiales bacterium


organism_name: Alloscardovia omnicolens


organism_name: Staphylococcus aureus


organism_name: Clostridioides difficile


organism_name: Veillonella sp.


organism_name: Enterococcus faecalis


organism_name: Enterobacter hormaechei


organism_name: Limosilactobacillus fermentum


organism_name: Clostridium saudiense


organism_name: Clostridium perfringens


organism_name: Staphylococcus sp.


organism_name: Escherichia coli


organism_name: Morganella morganii


organism_name: Klebsiella pneumoniae


organism_name: Citrobacter sp.


organism_name: Salmonella enterica


organism_name: Peptostreptococcus sp.


organism_name: Peptoniphilus harei


organism_name: Streptococcus oralis


organism_name: Proteus mirabilis


organism_name: Streptococcus sp.


organism_name: Veillonella sp.


organism_name: Bifidobacterium breve


organism_name: Peptostreptococcus anaerobius


organism_name: Klebsiella oxytoca


organism_name: Pseudomonas aeruginosa


organism_name: Enterococcus faecalis


excluded_from_refseq: derived from metagenome; genome length too small


organism_name: Clostridium sp.


organism_name: Enterobacter hormaechei


organism_name: Veillonella parvula


organism_name: Escherichia coli


organism_name: Klebsiella pneumoniae


organism_name: Salmonella enterica


organism_name: Clostridium perfringens


organism_name: Clostridiales bacterium


organism_name: Enterococcus casseliflavus


organism_name: Clostridioides difficile


organism_name: Peptoniphilus rhinitidis


organism_name: Veillonella sp.


organism_name: Bifidobacterium breve


excluded_from_refseq: contaminated; unverified source organism; derived from metagenome

organism_name: Bacteroides sp.


asm_submitter: National Center for Biotechnology Information


organism_name: Staphylococcus epidermidis


infraspecific_name: strain=DKZRHN


organism_name: Cutibacterium avidum


organism_name: Clostridium celatum


organism_name: Enterococcus faecalis


infraspecific_name: strain=QYOOVF


organism_name: Streptococcus mitis


organism_name: Bifidobacterium scardovii


organism_name: Klebsiella michiganensis


organism_name: Staphylococcus lugdunensis


organism_name: Anaerococcus hydrogenalis


infraspecific_name: strain=OMTJHK

organism_name: Escherichia coli


organism_name: Clostridium perfringens


infraspecific_name: strain=KGHOYI


organism_name: Clostridium sp.


infraspecific_name: strain=ENEPMG


organism_name: Bifidobacterium longum


organism_name: Flavonifractor plautii


infraspecific_name: strain=QVZYPN


organism_name: Lactobacillus gasseri


organism_name: Pseudomonas aeruginosa


organism_name: Bacteroides caccae


organism_name: Veillonella sp.


organism_name: Klebsiella pneumoniae


organism_name: Serratia marcescens


organism_name: Staphylococcus epidermidis


organism_name: Staphylococcus sp.


organism_name: Staphylococcus aureus


organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


organism_name: Haemophilus parainfluenzae


organism_name: Streptococcus mitis


organism_name: Enterococcus faecalis


organism_name: Klebsiella michiganensis


asm_submitter: Washington State Department of Agriculture GenomeTrakr submission group

organism_name: Escherichia coli


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genome length too small


organism_name: Lactococcus lactis


organism_name: Enterobacter asburiae


organism_name: Pseudomonas aeruginosa


organism_name: Salmonella enterica


organism_name: Veillonella sp.


asm_submitter: Centers for Disease Control and Prevention


organism_name: Klebsiella pneumoniae


organism_name: Bifidobacterium breve


organism_name: Enterococcus avium


organism_name: Cutibacterium avidum


organism_name: Haemophilus haemolyticus


organism_name: Kluyvera ascorbata


organism_name: Staphylococcus warneri


organism_name: Serratia liquefaciens


organism_name: Bacillus paranthracis


organism_name: Shigella sonnei


organism_name: Bifidobacterium longum


excluded_from_refseq: unverified source organism; derived from metagenome; genome length too small

organism_name: Streptococcus mitis


organism_name: Escherichia coli


organism_name: Streptococcus salivarius


organism_name: Prevotella bivia


organism_name: Pseudomonas aeruginosa


organism_name: Ureaplasma urealyticum


organism_name: Citrobacter portucalensis


organism_name: Klebsiella aerogenes


organism_name: Klebsiella oxytoca


organism_name: Veillonella sp.


organism_name: Clostridium perfringens


organism_name: Staphylococcus epidermidis


organism_name: Enterococcus faecalis


organism_name: Shigella flexneri


organism_name: Citrobacter koseri


organism_name: Enterococcus avium


organism_name: Staphylococcus aureus


organism_name: Peptostreptococcus sp.


organism_name: Serratia marcescens


organism_name: Enterobacter sp.


organism_name: Gemella haemolysans


organism_name: Staphylococcus sp.


organism_name: Escherichia coli


organism_name: Enterobacter hormaechei


organism_name: Campylobacter jejuni


organism_name: Bifidobacterium breve


organism_name: Klebsiella grimontii


organism_name: Pantoea sp.


organism_name: Cutibacterium granulosum


organism_name: Staphylococcus epidermidis


organism_name: Finegoldia magna


organism_name: Streptococcus sp.


organism_name: Erysipelotrichaceae bacterium


organism_name: Salmonella enterica


organism_name: Veillonella sp.


organism_name: Clostridium perfringens


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


organism_name: Enterococcus faecalis


organism_name: Paraclostridium bifermentans


organism_name: Flavonifractor plautii


organism_name: Serratia marcescens


organism_name: Escherichia coli


organism_name: Streptococcus parasanguinis


organism_name: Haemophilus parainfluenzae


organism_name: Streptococcus mitis


organism_name: Clostridioides difficile


organism_name: Staphylococcus sp.


excluded_from_refseq: contaminated; derived from metagenome; genome length too large

organism_name: Staphylococcus warneri


organism_name: Shigella flexneri


organism_name: Staphylococcus aureus


organism_name: Streptococcus agalactiae


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome

organism_name: Streptococcus vestibularis


excluded_from_refseq: unverified source organism; derived from metagenome; fragmented assembly; genome length too small

organism_name: Lactococcus lactis


organism_name: Salmonella enterica


organism_name: Shigella sonnei


organism_name: Haemophilus parahaemolyticus


organism_name: Clostridium perfringens


organism_name: Veillonella sp.


organism_name: Escherichia coli


organism_name: Clostridium sp.


organism_name: Haemophilus parainfluenzae


organism_name: Streptococcus mitis


organism_name: Enterobacter sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; many frameshifted proteins


organism_name: Klebsiella pneumoniae


organism_name: Staphylococcus epidermidis


organism_name: Staphylococcus lugdunensis


organism_name: Veillonella parvula


organism_name: Paraclostridium sordellii


organism_name: Corynebacterium sp.


excluded_from_refseq: from large multi-isolate project


organism_name: Neisseria sp.


organism_name: Campylobacter coli


excluded_from_refseq: derived from metagenome

organism_name: Enterococcus faecalis


organism_name: Phocaeicola vulgatus


organism_name: Clostridioides difficile


organism_name: Citrobacter koseri


organism_name: Bilophila wadsworthia


organism_name: Escherichia coli


organism_name: Phytobacter diazotrophicus


organism_name: Pseudomonas aeruginosa


organism_name: Klebsiella oxytoca


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Streptococcus sp.


organism_name: Shigella flexneri


organism_name: Anaerococcus vaginalis


organism_name: Veillonella sp.


organism_name: Acinetobacter ursingii


organism_name: Salmonella enterica


organism_name: Enterobacter hormaechei


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Klebsiella michiganensis


organism_name: Raoultella sp.


organism_name: Bifidobacterium longum


organism_name: Clostridium celatum


organism_name: Clostridium sp.


organism_name: Finegoldia magna


organism_name: Enterococcus hirae


organism_name: Escherichia coli


organism_name: Eikenella corrodens


organism_name: Actinomyces sp.


organism_name: Streptococcus anginosus


organism_name: Pluralibacter gergoviae


organism_name: Staphylococcus aureus


organism_name: Campylobacter jejuni


organism_name: Staphylococcus epidermidis


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Streptococcus mitis


organism_name: Enterococcus faecalis


organism_name: Salmonella enterica


organism_name: Mixta calida


organism_name: Streptococcus sp.


organism_name: Shigella flexneri


organism_name: Klebsiella pneumoniae


organism_name: Clostridioides difficile


organism_name: Enterobacter hormaechei


organism_name: Escherichia coli


organism_name: Staphylococcus lugdunensis


organism_name: Shigella sonnei


organism_name: Klebsiella michiganensis


organism_name: Serratia marcescens


organism_name: Enterobacter asburiae


organism_name: Campylobacter jejuni


organism_name: Bifidobacterium longum


organism_name: Limosilactobacillus fermentum


organism_name: Bifidobacterium breve


organism_name: Thomasclavelia ramosa


organism_name: Intestinibacter bartlettii


organism_name: Veillonella sp.


organism_name: Citrobacter freundii


organism_name: Clostridium perfringens


organism_name: Negativicoccus succinicivorans


organism_name: Staphylococcus aureus


organism_name: Escherichia coli


organism_name: Enterococcus faecalis


organism_name: Pseudomonas sp.


organism_name: Klebsiella pneumoniae


organism_name: Klebsiella grimontii


organism_name: Aeromonas sp.


organism_name: Varibaculum cambriense


organism_name: Serratia liquefaciens


organism_name: Staphylococcus epidermidis


organism_name: Finegoldia magna


organism_name: Clostridium sp.


organism_name: Veillonella parvula


organism_name: Enterobacter sp.


organism_name: Cutibacterium avidum


organism_name: Ureaplasma parvum


organism_name: Cutibacterium acnes


organism_name: Clostridium perfringens


organism_name: Escherichia coli


organism_name: Bifidobacterium breve


organism_name: Enterobacteriaceae bacterium


organism_name: Veillonella sp.


organism_name: Klebsiella michiganensis


organism_name: Thomasclavelia ramosa


organism_name: Enterobacter asburiae


organism_name: Enterobacter hormaechei


organism_name: Clostridioides difficile


organism_name: Staphylococcus epidermidis


organism_name: Streptococcus sp.


organism_name: Enterococcus faecalis


organism_name: Pseudomonas oryzihabitans


organism_name: Pantoea sp.


organism_name: Acinetobacter baumannii


organism_name: Enterococcus faecium


organism_name: Acinetobacter sp.


organism_name: Escherichia coli


organism_name: Klebsiella pneumoniae


organism_name: Varibaculum cambriense


organism_name: Peptoniphilus harei


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Bifidobacterium dentium


organism_name: Clostridium perfringens


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Anaerococcus sp.


organism_name: Veillonella sp.


organism_name: Salmonella enterica


organism_name: Finegoldia magna


organism_name: Enterobacter sp.


organism_name: Pluralibacter gergoviae


organism_name: Bifidobacterium breve


organism_name: Campylobacter jejuni


organism_name: Staphylococcus epidermidis


organism_name: Klebsiella michiganensis


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Lactococcus lactis


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Worthington


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Anatum


asm_submitter: Center for Food Safety and Applied Nutrition


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Berta


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Reading


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Campylobacter jejuni


organism_name: Vibrio cholerae


organism_name: Vibrio vulnificus


organism_name: Vibrio fluvialis


organism_name: Escherichia coli


organism_name: Shigella sonnei


organism_name: Campylobacter upsaliensis


organism_name: Citrobacter freundii


organism_name: Shigella flexneri


organism_name: Yersinia enterocolitica


organism_name: Campylobacter coli


organism_name: Pseudomonas aeruginosa


organism_name: Klebsiella ornithinolytica


assembly_level: Complete Genome


asm_submitter: FDA/CFSAN


isolate: clinical


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Kiambu


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar London


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Campylobacter jejuni


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Newport


isolate: 90 y/o; uterine prolapse


isolate: 78 y/o; febrile, previous UTI history


isolate: 52 y/o; renal transplant recipient


isolate: Pseudomonas aeruginosa PAO1-LasRQ45stop-mutant casein-evolved variant 4


isolate: Pseudomonas aeruginosa PAO1-LasRQ45stop-mutant casein-evolved variant 2


isolate: Pseudomonas aeruginosa PAO1-LasRQ45stop-mutant casein-evolved variant 3


isolate: Pseudomonas aeruginosa PAO1-LasRQ45stop-mutant casein-evolved variant 1


infraspecific_name: strain=PSAE


isolate: Sensitive Pseudomonas aeruginosa isolated from clinical cases


organism_name: Salmonella enterica


organism_name: Pseudomonas aeruginosa


isolate: Ginger


infraspecific_name: strain=Balb/c

isolate: Mouse #3

organism_name: Staphylococcus aureus


isolate: Mouse #4


isolate: Mouse #2


isolate: Mouse #1


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Salmonella enterica subsp. enterica serovar Derby


isolate: Food of animal origin


infraspecific_name: strain=L6 CP11285


infraspecific_name: strain=L2 CP1582


isolate: MRSA


excluded_from_refseq: unverified source organism; from large multi-isolate project

isolate: Pure bacterial isolates were sampled from the Mooi River in North West Province, South Africa

organism_name: Citrobacter freundii


organism_name: Citrobacter braakii


organism_name: Salmonella enterica subsp. enterica serovar Thompson


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Enterobacter cloacae


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica


organism_name: Salmonella enterica subsp. enterica serovar Muenster


organism_name: Salmonella enterica


organism_name: Campylobacter jejuni


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Escherichia coli


organism_name: Yersinia enterocolitica


organism_name: Salmonella enterica subsp. enterica serovar Adelaide


organism_name: Salmonella enterica subsp. enterica serovar Manhattan


organism_name: Campylobacter upsaliensis


organism_name: Salmonella enterica subsp. enterica serovar Thompson


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar Reading


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar 4:i:-


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Escherichia albertii


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


excluded_from_refseq: contaminated; from large multi-isolate project

infraspecific_name: strain=Sample 87


isolate: Urinary isolate


infraspecific_name: strain=Sample 89


infraspecific_name: strain=Sample 88


infraspecific_name: strain=Sample 90


infraspecific_name: strain=Sample 91


infraspecific_name: strain=Sample 10


infraspecific_name: strain=Sample 93


infraspecific_name: strain=Sample 92


infraspecific_name: strain=Sample 94


infraspecific_name: strain=Sample 95


infraspecific_name: strain=Sample 96


infraspecific_name: strain=Sample 98


infraspecific_name: strain=Sample 97


infraspecific_name: strain=Sample 99


infraspecific_name: strain=Sample 100


infraspecific_name: strain=Sample 1


infraspecific_name: strain=Sample 101


infraspecific_name: strain=Sample 11


infraspecific_name: strain=Sample 102


infraspecific_name: strain=Sample 103


infraspecific_name: strain=Sample 104


infraspecific_name: strain=Sample 105


infraspecific_name: strain=Sample 106


infraspecific_name: strain=Sample 107


infraspecific_name: strain=Sample 108


infraspecific_name: strain=Sample 109


infraspecific_name: strain=Sample 110


infraspecific_name: strain=Sample 12


infraspecific_name: strain=Sample 111


infraspecific_name: strain=Sample 112


infraspecific_name: strain=Sample 113


infraspecific_name: strain=Sample 114


infraspecific_name: strain=Sample 115


infraspecific_name: strain=Sample 118


infraspecific_name: strain=Sample 116


infraspecific_name: strain=Sample 117


infraspecific_name: strain=Sample 119


infraspecific_name: strain=Sample 120


infraspecific_name: strain=Sample 13


infraspecific_name: strain=Sample 121


infraspecific_name: strain=Sample 122


infraspecific_name: strain=Sample 124


infraspecific_name: strain=Sample 123


infraspecific_name: strain=Sample 126


infraspecific_name: strain=Sample 125


infraspecific_name: strain=Sample 127


infraspecific_name: strain=Sample 128


infraspecific_name: strain=Sample 129


infraspecific_name: strain=Sample 130


infraspecific_name: strain=Sample 14


infraspecific_name: strain=Sample 132


infraspecific_name: strain=Sample 131


infraspecific_name: strain=Sample 133


infraspecific_name: strain=Sample 134


infraspecific_name: strain=Sample 135


infraspecific_name: strain=Sample 136


infraspecific_name: strain=Sample 138


infraspecific_name: strain=Sample 137


infraspecific_name: strain=Sample 140


infraspecific_name: strain=Sample 139


infraspecific_name: strain=Sample 15


infraspecific_name: strain=Sample 141


infraspecific_name: strain=Sample 142


infraspecific_name: strain=Sample 143


infraspecific_name: strain=Sample 145


infraspecific_name: strain=Sample 144


infraspecific_name: strain=Sample 147


infraspecific_name: strain=Sample 146


infraspecific_name: strain=Sample 148


infraspecific_name: strain=Sample 149


infraspecific_name: strain=Sample 151


infraspecific_name: strain=Sample 150


infraspecific_name: strain=Sample 16


infraspecific_name: strain=Sample 152


infraspecific_name: strain=Sample 153


infraspecific_name: strain=Sample 154


infraspecific_name: strain=Sample 155


infraspecific_name: strain=Sample 156


infraspecific_name: strain=Sample 158


infraspecific_name: strain=Sample 159


infraspecific_name: strain=Sample 157


infraspecific_name: strain=Sample 17


infraspecific_name: strain=Sample 160


infraspecific_name: strain=Sample 161


infraspecific_name: strain=Sample 162


infraspecific_name: strain=Sample 163


infraspecific_name: strain=Sample 164


infraspecific_name: strain=Sample 20


infraspecific_name: strain=Sample 18


infraspecific_name: strain=Sample 21


infraspecific_name: strain=Sample 3


infraspecific_name: strain=Sample 22


infraspecific_name: strain=Sample 24


infraspecific_name: strain=Sample 26


infraspecific_name: strain=Sample 25


infraspecific_name: strain=Sample 30


infraspecific_name: strain=Sample 27


infraspecific_name: strain=Sample 4


infraspecific_name: strain=Sample 32


infraspecific_name: strain=Sample 33


infraspecific_name: strain=Sample 34


infraspecific_name: strain=Sample 36


infraspecific_name: strain=Sample 35


infraspecific_name: strain=Sample 38


infraspecific_name: strain=Sample 37


infraspecific_name: strain=Sample 39


infraspecific_name: strain=Sample 41


infraspecific_name: strain=Sample 40


infraspecific_name: strain=Sample 42


infraspecific_name: strain=Sample 46


infraspecific_name: strain=Sample 45


infraspecific_name: strain=Sample 47


infraspecific_name: strain=Sample 48


infraspecific_name: strain=Sample 49


infraspecific_name: strain=Sample 6


infraspecific_name: strain=Sample 50


infraspecific_name: strain=Sample 51


infraspecific_name: strain=Sample 52


infraspecific_name: strain=Sample 53


infraspecific_name: strain=Sample 54


infraspecific_name: strain=Sample 55


infraspecific_name: strain=Sample 56


infraspecific_name: strain=Sample 57


infraspecific_name: strain=Sample 58


infraspecific_name: strain=Sample 59


infraspecific_name: strain=Sample 60


infraspecific_name: strain=Sample 7


infraspecific_name: strain=Sample 62


infraspecific_name: strain=Sample 61


infraspecific_name: strain=Sample 63


infraspecific_name: strain=Sample 65


infraspecific_name: strain=Sample 64


infraspecific_name: strain=Sample 66


infraspecific_name: strain=Sample 67


infraspecific_name: strain=Sample 68


infraspecific_name: strain=Sample 69


infraspecific_name: strain=Sample 70


infraspecific_name: strain=Sample 79


infraspecific_name: strain=Sample 80


infraspecific_name: strain=Sample 8


infraspecific_name: strain=Sample 75


infraspecific_name: strain=Sample 72


infraspecific_name: strain=Sample 73


infraspecific_name: strain=Sample 71


infraspecific_name: strain=Sample 74


infraspecific_name: strain=Sample 76


infraspecific_name: strain=Sample 77


infraspecific_name: strain=Sample 78


infraspecific_name: strain=Sample 9


infraspecific_name: strain=Sample 82


infraspecific_name: strain=Sample 81


infraspecific_name: strain=Sample 84


infraspecific_name: strain=Sample 83


infraspecific_name: strain=Sample 86


infraspecific_name: strain=Sample 85


organism_name: Shigella flexneri


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Campylobacter coli


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Yersinia enterocolitica


isolate: ATCC BAA-1045


organism_name: Pseudomonas aeruginosa


organism_name: Klebsiella planticola


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Livingstone


asm_submitter: Arizona State Public Health Laboratory


organism_name: Clostridium botulinum


organism_name: Enterococcus faecalis


organism_name: Negativicoccus succinicivorans


organism_name: Cutibacterium acnes


organism_name: Streptococcus anginosus


organism_name: Salmonella enterica


organism_name: Enterococcus faecium


organism_name: Enterobacter hormaechei


organism_name: Escherichia coli


organism_name: Haemophilus parainfluenzae


organism_name: Veillonella sp.


organism_name: Clostridium sp.


organism_name: Klebsiella oxytoca


organism_name: Enterobacter sp.


organism_name: Staphylococcus epidermidis


organism_name: Corynebacterium sp.


organism_name: Klebsiella michiganensis


organism_name: Staphylococcus aureus


organism_name: Clostridioides difficile


organism_name: Bacteroides sp.


organism_name: Campylobacter jejuni


organism_name: Streptococcus anginosus


organism_name: Salmonella enterica


organism_name: Clostridium sporogenes


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Finegoldia magna


organism_name: Cutibacterium avidum


organism_name: Enterococcus gallinarum


organism_name: Escherichia coli


organism_name: Clostridium butyricum


organism_name: Enterococcus faecium


organism_name: Enterococcus faecalis


organism_name: Enterobacter hormaechei


organism_name: Staphylococcus epidermidis


organism_name: Klebsiella aerogenes


organism_name: Pseudomonas aeruginosa


organism_name: Clostridium perfringens


organism_name: Clostridioides difficile


organism_name: Klebsiella pneumoniae


organism_name: Staphylococcus warneri


organism_name: Enterobacter sp.


organism_name: Sneathia sanguinegens


organism_name: Corynebacterium sp.


organism_name: Negativicoccus massiliensis


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Cutibacterium granulosum


organism_name: Cutibacterium avidum


organism_name: Escherichia coli


organism_name: Serratia marcescens


organism_name: Veillonella sp.


organism_name: Haemophilus parainfluenzae


organism_name: Staphylococcus epidermidis


organism_name: Enterococcus faecalis


organism_name: Dermabacter sp.


organism_name: Pseudomonas aeruginosa


organism_name: Anaerococcus sp.


organism_name: Clostridioides difficile


organism_name: Paenibacillus sp.


organism_name: Staphylococcus sp.


organism_name: Clostridium sp.


organism_name: Finegoldia magna


organism_name: Corynebacterium sp.


organism_name: Gemella haemolysans


organism_name: Staphylococcus warneri


organism_name: Klebsiella aerogenes


organism_name: Pantoea sp.


organism_name: Cutibacterium avidum


organism_name: Salmonella enterica


organism_name: Shigella flexneri


organism_name: Enterococcus faecalis


organism_name: Veillonella sp.


organism_name: Thomasclavelia ramosa


organism_name: Streptococcus sp.


organism_name: Klebsiella michiganensis


organism_name: Escherichia coli


excluded_from_refseq: unverified source organism; derived from metagenome; genus undefined

organism_name: Clostridiaceae bacterium


organism_name: Haemophilus parainfluenzae


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Lachnospiraceae bacterium


organism_name: Clostridium butyricum


organism_name: Clostridium sp.


organism_name: Citrobacter freundii


organism_name: Campylobacter jejuni


organism_name: Staphylococcus epidermidis


organism_name: Clostridium perfringens


organism_name: Salmonella enterica


organism_name: Streptococcus agalactiae


organism_name: Enterococcus faecalis


organism_name: Staphylococcus sp.


organism_name: Staphylococcus lugdunensis


organism_name: Streptococcus parasanguinis


organism_name: Clostridioides difficile


organism_name: Staphylococcus haemolyticus


organism_name: Enterococcus faecium


organism_name: Neisseria subflava


organism_name: Streptococcus salivarius


organism_name: Streptococcus mitis


organism_name: Pseudomonas aeruginosa


organism_name: Klebsiella pneumoniae


organism_name: Escherichia coli


organism_name: Bacteroides sp.


organism_name: Veillonella dispar


organism_name: Streptococcus sp.


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; many frameshifted proteins

organism_name: Veillonella parvula


organism_name: Lancefieldella parvula


organism_name: Actinomyces sp.


organism_name: Terrisporobacter othiniensis


organism_name: Leclercia adecarboxylata


organism_name: Haemophilus parainfluenzae


organism_name: Staphylococcus sp.


organism_name: Clostridium celatum


organism_name: Streptococcus parasanguinis


organism_name: Peptostreptococcaceae bacterium


organism_name: Clostridium sp.


organism_name: Enterococcus hirae


organism_name: Staphylococcus epidermidis


organism_name: Escherichia coli


organism_name: Enterococcus gallinarum


organism_name: Agathobacter rectalis


organism_name: Varibaculum cambriense


organism_name: Cutibacterium avidum


organism_name: Dermabacter sp.


organism_name: Klebsiella pneumoniae


organism_name: Streptococcus lutetiensis


organism_name: Mixta calida


organism_name: Salmonella enterica


organism_name: Enterococcus faecalis


organism_name: Clostridium baratii


organism_name: Atopobium minutum


organism_name: Hungatella hathewayi


organism_name: Sporomusaceae bacterium


organism_name: Enterococcus faecium


organism_name: Staphylococcus warneri


organism_name: Escherichia coli


organism_name: Staphylococcus aureus


organism_name: Clostridium celatum


organism_name: Corynebacterium sp.


organism_name: Negativicoccus succinicivorans


organism_name: Cutibacterium avidum


organism_name: Actinomyces sp.


organism_name: Haemophilus parainfluenzae


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Clostridiales bacterium


organism_name: Salmonella enterica


organism_name: Veillonella sp.


organism_name: Enterobacter sp.


organism_name: Klebsiella pneumoniae


organism_name: Enterococcus faecalis


organism_name: Enterobacteriaceae bacterium


organism_name: Klebsiella quasipneumoniae


organism_name: Streptococcus sp.


organism_name: Clostridium sp.


organism_name: Enterobacter roggenkampii


organism_name: Escherichia coli


organism_name: Campylobacter ureolyticus


organism_name: Pseudomonas aeruginosa


organism_name: Clostridium perfringens


organism_name: Eggerthella sp.


organism_name: Clostridium botulinum


organism_name: Actinomyces sp.


organism_name: Finegoldia magna


organism_name: Staphylococcus epidermidis


organism_name: Enterobacter sp.


organism_name: Peptoniphilus grossensis


organism_name: Klebsiella variicola


organism_name: Veillonella sp.


organism_name: Cutibacterium avidum


organism_name: Clostridium butyricum


organism_name: Streptococcus sp.


organism_name: Peptostreptococcus anaerobius


organism_name: Sutterella wadsworthensis


organism_name: Anaerococcus vaginalis


organism_name: Pseudomonas aeruginosa


organism_name: Bacillota bacterium


organism_name: Enterococcus faecalis


organism_name: Paenibacillus dendritiformis


organism_name: Citrobacter sp.


organism_name: Klebsiella oxytoca


organism_name: Staphylococcus sp.


organism_name: Haemophilus parainfluenzae


organism_name: Clostridium botulinum


organism_name: Atopobium minutum


organism_name: Bifidobacterium sp.


organism_name: Clostridium sp.


organism_name: Escherichia coli


organism_name: Salmonella enterica


organism_name: Veillonella parvula


organism_name: Streptococcus anginosus


organism_name: Enterobacter asburiae


organism_name: Anaerococcus prevotii


organism_name: Peptoniphilus harei


organism_name: Veillonella sp.


organism_name: Actinomyces sp.


organism_name: Enterococcus faecalis


organism_name: Streptococcus salivarius


organism_name: Finegoldia magna


organism_name: Clostridioides difficile


organism_name: Staphylococcus aureus


organism_name: Enterococcus faecium


organism_name: Staphylococcus epidermidis


organism_name: Winkia neuii


organism_name: Eggerthella sp.


organism_name: Haemophilus parainfluenzae


organism_name: Enterobacter sichuanensis


organism_name: Clostridium perfringens


organism_name: Mixta calida


organism_name: Klebsiella pneumoniae


organism_name: Blautia producta


organism_name: Veillonella parvula


organism_name: Negativicoccus succinicivorans


organism_name: Atopobium sp.


organism_name: Clostridium sp.


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome

organism_name: Veillonella sp.


organism_name: Finegoldia magna


organism_name: Staphylococcus sp.


organism_name: Clostridioides difficile


organism_name: Lacticaseibacillus rhamnosus


organism_name: Varibaculum cambriense


organism_name: Streptococcus sp.


organism_name: Anaerococcus vaginalis


organism_name: Actinomyces sp.


organism_name: Clostridium celatum


organism_name: Anaerococcus sp.


organism_name: Streptococcus agalactiae


organism_name: Klebsiella pneumoniae


organism_name: Enterococcus faecalis


organism_name: Escherichia coli


organism_name: Dialister sp.


organism_name: Peptoniphilus lacydonensis


organism_name: Staphylococcus epidermidis


organism_name: Bifidobacterium bifidum


organism_name: Negativicoccus succinicivorans


organism_name: Cutibacterium avidum


organism_name: Enterococcus faecium


organism_name: Bifidobacterium scardovii


organism_name: Staphylococcus aureus


organism_name: Atopobium minutum


organism_name: Dialister micraerophilus


organism_name: Prevotella bivia


organism_name: Peptoniphilus harei


organism_name: Bifidobacterium sp.


organism_name: Bifidobacterium longum


organism_name: Finegoldia magna


organism_name: Klebsiella oxytoca


organism_name: Peptostreptococcus sp.


organism_name: Anaerococcus vaginalis


organism_name: Enterobacter hormaechei


organism_name: Enterococcus sp.


organism_name: Peptoniphilus lacydonensis


organism_name: Eggerthella sp.


organism_name: Cutibacterium avidum


organism_name: Campylobacter ureolyticus


organism_name: Actinomyces sp.


organism_name: Staphylococcus aureus


organism_name: Klebsiella pneumoniae


organism_name: Staphylococcus epidermidis


organism_name: Enterococcus faecalis


organism_name: Enterobacter sichuanensis


organism_name: Corynebacterium sp.


organism_name: Staphylococcus warneri


organism_name: Blautia producta


organism_name: Varibaculum cambriense


excluded_from_refseq: contaminated; derived from metagenome; genus undefined

organism_name: Clostridiales bacterium


organism_name: Peptoniphilus harei


organism_name: Staphylococcus haemolyticus


organism_name: Negativicoccus succinicivorans


organism_name: Finegoldia magna


organism_name: Escherichia coli


organism_name: Peptoniphilus lacydonensis


organism_name: Streptococcus agalactiae


organism_name: Clostridium perfringens


organism_name: Enterobacter sp.


organism_name: Actinomyces urogenitalis


organism_name: Ruminococcus sp.


organism_name: Veillonella sp.


organism_name: Enterococcus faecalis


organism_name: Cutibacterium avidum


organism_name: Clostridium sp.


organism_name: Pseudescherichia vulneris


organism_name: Serratia liquefaciens


organism_name: Staphylococcus epidermidis


organism_name: Pantoea sp.


organism_name: Anaerococcus vaginalis


organism_name: Streptococcus mitis


organism_name: Acinetobacter baumannii


organism_name: Peptoniphilus harei


organism_name: Bifidobacterium breve


organism_name: Enterococcus gilvus


organism_name: Escherichia coli


organism_name: Pseudomonas aeruginosa


excluded_from_refseq: from large multi-isolate project

organism_name: Staphylococcus aureus


excluded_from_refseq: derived from metagenome


organism_name: Klebsiella pneumoniae


organism_name: Veillonella sp.


organism_name: Enterococcus faecalis


organism_name: Finegoldia magna


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Anaerococcus sp.


organism_name: Varibaculum cambriense


organism_name: Peptostreptococcus anaerobius


organism_name: Actinomyces sp.


organism_name: Clostridium perfringens


organism_name: Streptococcus sp.


organism_name: Oscillospiraceae bacterium


organism_name: Negativicoccus succinicivorans


organism_name: Peptoniphilus harei


organism_name: Atopobium sp.


organism_name: Streptococcus parasanguinis


organism_name: Streptococcus vestibularis


organism_name: Anaerococcus vaginalis


organism_name: Staphylococcus aureus


organism_name: Cutibacterium avidum


organism_name: Veillonella parvula


organism_name: Finegoldia magna


organism_name: Clostridioides difficile


organism_name: Staphylococcus epidermidis


organism_name: Klebsiella michiganensis


organism_name: Citrobacter freundii


organism_name: Clostridium sp.


organism_name: Enterococcus faecalis


organism_name: Varibaculum cambriense


organism_name: Mogibacterium sp.


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Pseudomonas aeruginosa


organism_name: Actinomyces sp.


organism_name: Haemophilus parainfluenzae


organism_name: Slackia sp.


organism_name: Escherichia coli


organism_name: Lachnospiraceae bacterium


organism_name: Bifidobacterium scardovii


organism_name: Clostridium perfringens


organism_name: Citrobacter sp.


organism_name: Klebsiella pneumoniae


organism_name: Enterococcus faecium


organism_name: Staphylococcus epidermidis


organism_name: Clostridioides difficile


organism_name: Bifidobacterium breve


organism_name: Peptoniphilus rhinitidis


organism_name: Veillonella parvula


organism_name: Veillonella sp.


organism_name: Pseudomonas aeruginosa


organism_name: Clostridium sp.


organism_name: Streptococcus vestibularis


organism_name: Enterococcus faecalis


organism_name: Kluyvera cryocrescens


organism_name: Streptococcus sp.


organism_name: Citrobacter freundii


organism_name: Lacticaseibacillus rhamnosus


organism_name: Streptococcus parasanguinis


organism_name: Negativicoccus succinicivorans


organism_name: Haemophilus parainfluenzae


organism_name: Enterobacter hormaechei


organism_name: Staphylococcus aureus


organism_name: Peptostreptococcus sp.


organism_name: Finegoldia magna


organism_name: Cutibacterium avidum


organism_name: Staphylococcus epidermidis


organism_name: Mixta calida


organism_name: Veillonella sp.


organism_name: Streptococcus salivarius


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Enterococcus faecalis


organism_name: Acinetobacter sp.


organism_name: Limosilactobacillus fermentum


organism_name: Clostridium butyricum


organism_name: Pantoea sp.


organism_name: Clostridium sp.


organism_name: Actinomyces sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Neisseria sp.


organism_name: Citrobacter freundii


organism_name: Haemophilus parainfluenzae


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Schaalia odontolytica


organism_name: Clostridium perfringens


organism_name: Peptostreptococcus sp.


organism_name: Veillonella sp.


organism_name: Clostridioides difficile


organism_name: Enterococcus casseliflavus


organism_name: Cutibacterium avidum


organism_name: Enterobacter hormaechei


organism_name: Finegoldia magna


organism_name: Fusobacterium periodonticum


organism_name: Streptococcus parasanguinis


organism_name: Mixta calida


organism_name: Staphylococcus epidermidis


organism_name: Peptoniphilus harei


organism_name: Pantoea sp.


organism_name: Enterococcus faecium


organism_name: Anaerococcus vaginalis


organism_name: Staphylococcus sp.


organism_name: Enterococcus faecalis


organism_name: Clostridium sp.


organism_name: Clostridium butyricum


organism_name: Cronobacter sakazakii


organism_name: Acinetobacter sp.


organism_name: Escherichia coli


organism_name: Bifidobacterium bifidum


organism_name: Veillonella sp.


organism_name: Cutibacterium avidum


organism_name: Bifidobacterium sp.


organism_name: Varibaculum cambriense


organism_name: Serratia marcescens


organism_name: Staphylococcus epidermidis


organism_name: Klebsiella pneumoniae


organism_name: Bifidobacterium scardovii


organism_name: Clostridium perfringens


organism_name: Atopobium minutum


organism_name: Actinomyces urogenitalis


organism_name: Eggerthella sp.


organism_name: Streptococcus agalactiae


organism_name: Negativicoccus succinicivorans


organism_name: Dialister sp.


organism_name: Clostridiales bacterium


organism_name: Peptostreptococcus sp.


organism_name: Escherichia coli


organism_name: Salmonella enterica


organism_name: Anaerococcus vaginalis


organism_name: Finegoldia magna


organism_name: Enterococcus faecalis


organism_name: Staphylococcus epidermidis


organism_name: Klebsiella pneumoniae


organism_name: Dermabacter sp.


organism_name: Paenibacillus macerans


organism_name: Veillonella sp.


organism_name: Ruminococcus sp.


organism_name: Bifidobacterium longum


organism_name: Lacticaseibacillus rhamnosus


organism_name: Enterococcus faecium


organism_name: Cutibacterium avidum


organism_name: Negativicoccus succinicivorans


organism_name: Actinomyces sp.


organism_name: Bifidobacterium breve


organism_name: Escherichia coli


organism_name: Salmonella enterica


organism_name: Staphylococcus aureus


organism_name: Haemophilus parainfluenzae


organism_name: Klebsiella oxytoca


organism_name: Peptostreptococcus anaerobius


organism_name: Anaerococcus vaginalis


organism_name: Eggerthella sp.


organism_name: Staphylococcus epidermidis


organism_name: Proteus mirabilis


organism_name: Slackia sp.


organism_name: Pseudomonas aeruginosa


organism_name: Peptoniphilus harei


organism_name: Bacteroides caccae


organism_name: Clostridium butyricum


organism_name: Clostridium perfringens


organism_name: Cutibacterium avidum


organism_name: Anaerococcus sp.


organism_name: Corynebacterium sp.


organism_name: Finegoldia magna


organism_name: Klebsiella pneumoniae


organism_name: Clostridium sp.


organism_name: Veillonella parvula


organism_name: Escherichia coli


organism_name: Acinetobacter junii


organism_name: Bifidobacterium breve


organism_name: Staphylococcus epidermidis


organism_name: Veillonella sp.


organism_name: Pantoea sp.


organism_name: Staphylococcus lugdunensis


organism_name: Enterobacter sp.


organism_name: Bradyrhizobium sp.


organism_name: Acinetobacter sp.


organism_name: Streptococcus sp.


organism_name: Proteus mirabilis


organism_name: Citrobacter koseri


organism_name: Enterococcus faecalis


organism_name: Neisseria subflava


organism_name: Paraclostridium sordellii


organism_name: Salmonella enterica


organism_name: Haemophilus parainfluenzae


organism_name: Peptoniphilus harei


organism_name: Clostridium perfringens


organism_name: Lactobacillus crispatus


organism_name: Enterobacter hormaechei


organism_name: Actinomyces urogenitalis


organism_name: Bacteroides faecis


organism_name: Citrobacter freundii


organism_name: Escherichia coli


organism_name: Klebsiella pneumoniae


organism_name: Staphylococcus epidermidis


organism_name: Streptococcus anginosus


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Staphylococcus lugdunensis


organism_name: Winkia neuii


organism_name: Bradyrhizobium sp.


organism_name: Salmonella enterica


organism_name: Anaerococcus vaginalis


organism_name: Staphylococcus aureus


organism_name: Cutibacterium avidum


organism_name: Enterobacter asburiae


organism_name: Flavonifractor plautii


organism_name: Clostridium perfringens


organism_name: Staphylococcus pseudintermedius


organism_name: Veillonella sp.


organism_name: Staphylococcus warneri


organism_name: Staphylococcus haemolyticus


organism_name: Clostridium sp.


organism_name: Enterococcus faecalis


organism_name: Haemophilus parainfluenzae


organism_name: Paraclostridium sordellii


organism_name: Intestinibacter bartlettii


organism_name: Klebsiella pneumoniae


organism_name: Staphylococcus epidermidis


organism_name: Streptococcus mitis


organism_name: Bradyrhizobium sp.


organism_name: Clostridioides difficile


organism_name: Anaerocolumna aminovalerica


organism_name: Klebsiella grimontii


excluded_from_refseq: unverified source organism; derived from metagenome; fragmented assembly; genome length too small


organism_name: Clostridium sporogenes


organism_name: Flavonifractor plautii


organism_name: Clostridiales bacterium


organism_name: Acinetobacter sp.


organism_name: Serratia marcescens


organism_name: Bifidobacterium scardovii


organism_name: Enterobacter hormaechei


organism_name: Clostridium sp.


organism_name: Cutibacterium granulosum


organism_name: Enterococcus faecalis


organism_name: Cutibacterium acnes


organism_name: Clostridium celatum


organism_name: Clostridium perfringens


organism_name: Streptococcus mitis


organism_name: Staphylococcus pseudintermedius


organism_name: Bradyrhizobium sp.


organism_name: Salmonella enterica


organism_name: Staphylococcus epidermidis


organism_name: Corynebacterium sp.


organism_name: Klebsiella pneumoniae


organism_name: Rothia mucilaginosa


organism_name: Eggerthella sp.


organism_name: Pantoea sp.


organism_name: Mixta calida


organism_name: Yersiniaceae bacterium


organism_name: Enterobacter sp.


organism_name: Bacteroides sp.


organism_name: Klebsiella quasipneumoniae


organism_name: Sutterella wadsworthensis


organism_name: Veillonella sp.


organism_name: Lachnospiraceae bacterium


organism_name: Streptococcus sp.


organism_name: Campylobacter jejuni


organism_name: Parabacteroides sp.


organism_name: Campylobacter coli


organism_name: Collinsella sp.


organism_name: Escherichia coli


organism_name: Clostridioides difficile


organism_name: Prevotella sp.


organism_name: Enterobacter hormaechei


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; many frameshifted proteins


organism_name: Enterococcus sp.


excluded_from_refseq: annotation fails completeness check; derived from metagenome


organism_name: Paraclostridium sordellii


organism_name: Clostridium perfringens


organism_name: Enterococcus faecalis


organism_name: Staphylococcus epidermidis


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Klebsiella pneumoniae


organism_name: Corynebacterium kroppenstedtii


organism_name: Bifidobacterium longum


organism_name: Intestinibacter bartlettii


organism_name: Bradyrhizobium sp.


organism_name: [Ruminococcus] lactaris


organism_name: Staphylococcus sp.


organism_name: Mixta calida


organism_name: Klebsiella grimontii


organism_name: Clostridium sp.


organism_name: Veillonella sp.


organism_name: Streptococcus sp.


organism_name: Streptococcus vestibularis


organism_name: Enterococcus raffinosus


organism_name: Streptococcus lutetiensis


organism_name: Enterococcus faecalis


organism_name: Clostridioides difficile


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small


organism_name: Alloscardovia omnicolens


organism_name: Lactobacillus johnsonii


organism_name: Staphylococcus epidermidis


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Finegoldia magna


organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


organism_name: Gemella haemolysans


organism_name: Prevotella bivia


organism_name: Streptococcus salivarius


organism_name: Anaerococcus vaginalis


organism_name: Veillonella sp.


organism_name: Streptococcus sp.


excluded_from_refseq: unverified source organism; from large multi-isolate project


organism_name: Klebsiella michiganensis


organism_name: Lactococcus lactis


organism_name: Streptococcus mitis


organism_name: Bradyrhizobium sp.


organism_name: Corynebacterium sp.


organism_name: Staphylococcus epidermidis


organism_name: Lachnoanaerobaculum sp.


organism_name: Escherichia coli


organism_name: Alloscardovia omnicolens


organism_name: Salmonella enterica


organism_name: Capnocytophaga sp.


organism_name: Campylobacter coli


organism_name: Streptococcus anginosus


organism_name: Campylobacter jejuni


organism_name: Enterococcus avium


organism_name: Bifidobacterium longum


organism_name: Veillonella parvula


organism_name: Streptococcus vestibularis


organism_name: Bacteroides sp.


organism_name: Bacteroides stercoris


organism_name: Clostridium perfringens


organism_name: Haemophilus parainfluenzae


organism_name: Streptococcus salivarius


organism_name: Bradyrhizobium sp.


organism_name: Neisseria mucosa


organism_name: Escherichia coli


organism_name: Clostridioides difficile


organism_name: Staphylococcus epidermidis


organism_name: Streptococcus sp.


organism_name: Actinomyces sp.


organism_name: Veillonella sp.


organism_name: Finegoldia magna


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Enterobacteriaceae bacterium


organism_name: Varibaculum cambriense


organism_name: Staphylococcus sp.


organism_name: Staphylococcus aureus


organism_name: Enterococcus faecalis


organism_name: Streptococcus mitis


organism_name: Haemophilus influenzae


organism_name: Klebsiella michiganensis


organism_name: Clostridium perfringens


organism_name: Streptococcus salivarius


organism_name: Escherichia coli


excluded_from_refseq: contaminated; unverified source organism; derived from metagenome


organism_name: Haemophilus parainfluenzae


organism_name: Pseudomonas aeruginosa


organism_name: Bacillus cereus


organism_name: Salmonella enterica


organism_name: Bacillus thuringiensis


organism_name: Veillonella sp.


organism_name: Actinomyces sp.


organism_name: Bradyrhizobium sp.


organism_name: Gemella haemolysans


excluded_from_refseq: unverified source organism; derived from metagenome; fragmented assembly

organism_name: Staphylococcus sp.


organism_name: Klebsiella pneumoniae


organism_name: Enterobacter kobei


organism_name: Streptococcus parasanguinis


organism_name: Clostridium sp.


organism_name: Peptoniphilus harei


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Veillonella parvula


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Finegoldia magna


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Staphylococcus epidermidis


organism_name: Streptococcus agalactiae


excluded_from_refseq: contaminated; unverified source organism; derived from metagenome; fragmented assembly


organism_name: Enterococcus faecalis


organism_name: Anaerococcus vaginalis


organism_name: Anaerococcus sp.


organism_name: Actinomyces urogenitalis


organism_name: Veillonella sp.


organism_name: Staphylococcus haemolyticus


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome


excluded_from_refseq: derived from metagenome

organism_name: Leclercia adecarboxylata


organism_name: Intestinibacter bartlettii


organism_name: Negativicoccus succinicivorans


organism_name: Lactobacillus gasseri


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Bradyrhizobium sp.


organism_name: Eggerthella sp.


organism_name: Campylobacter sp.


organism_name: Bifidobacterium breve


organism_name: Bifidobacterium dentium


organism_name: Cutibacterium avidum


organism_name: Pseudomonas aeruginosa


organism_name: Clostridium botulinum


organism_name: Streptococcus lutetiensis


organism_name: Finegoldia magna


organism_name: Enterococcus faecium


organism_name: Enterobacter hormaechei


organism_name: Clostridiales bacterium


organism_name: Clostridium sp.


organism_name: Veillonella sp.


organism_name: Haemophilus parainfluenzae


excluded_from_refseq: from large multi-isolate project

organism_name: Salmonella enterica


organism_name: Clostridioides difficile


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Staphylococcus aureus


organism_name: Streptococcus thermophilus


organism_name: Staphylococcus epidermidis


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Streptococcus salivarius


organism_name: Clostridium perfringens


organism_name: Blautia producta


organism_name: Enterococcus faecalis


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Escherichia coli


organism_name: Enterobacter hormaechei


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Roseburia hominis


organism_name: Enterococcus faecium


organism_name: Streptococcus lutetiensis


organism_name: Streptococcus parasanguinis


organism_name: Veillonella parvula


organism_name: Franconibacter helveticus


organism_name: Clostridium sp.


organism_name: Pseudomonas aeruginosa


organism_name: Dermabacter sp.


organism_name: Veillonella sp.


organism_name: Terrisporobacter othiniensis


organism_name: Clostridiales bacterium


organism_name: Clostridioides difficile


organism_name: Haemophilus parainfluenzae


organism_name: Staphylococcus sp.


organism_name: Escherichia coli


organism_name: Enterococcus faecalis


organism_name: Enterobacter sp.


organism_name: Klebsiella aerogenes


organism_name: Clostridium perfringens


organism_name: Veillonella dispar


organism_name: Streptococcus mitis


organism_name: Cutibacterium acnes


organism_name: Streptococcus salivarius


organism_name: Staphylococcus epidermidis


organism_name: Pseudomonas aeruginosa


organism_name: Clostridium celatum


organism_name: Lactococcus lactis


organism_name: Clostridium sp.


organism_name: Actinomyces sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genome length too small

organism_name: Staphylococcus simulans


organism_name: Lactobacillus paragasseri


organism_name: Escherichia coli


organism_name: Ligilactobacillus salivarius


organism_name: Lactobacillus crispatus


organism_name: Enterococcus faecalis


organism_name: Streptococcus peroris


organism_name: Corynebacterium sp.


organism_name: Dialister sp.


organism_name: Campylobacter ureolyticus


organism_name: Enterococcus hirae


organism_name: Finegoldia magna


organism_name: Enterobacter roggenkampii


organism_name: Klebsiella variicola


organism_name: Enterobacteriaceae bacterium


organism_name: Clostridium perfringens


organism_name: Staphylococcus epidermidis


organism_name: Clostridium sp.


organism_name: Anaerococcus vaginalis


organism_name: Escherichia coli


organism_name: Streptococcus mitis


organism_name: Streptococcus sp.


organism_name: Peptoniphilus harei


organism_name: Salmonella enterica


organism_name: Enterobacter sp.


organism_name: Peptoniphilus grossensis


organism_name: Bifidobacterium breve


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Klebsiella pneumoniae


organism_name: Veillonella sp.


organism_name: Enterobacter roggenkampii


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome


organism_name: Clostridium perfringens


organism_name: Enterococcus faecalis


organism_name: Salmonella enterica subsp. enterica serovar Bovismorbificans


organism_name: Cronobacter sakazakii


organism_name: Lawsonella clevelandensis


organism_name: Anaerococcus vaginalis


organism_name: Streptococcus sp.


organism_name: Shigella flexneri


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Klebsiella sp.


organism_name: Citrobacter freundii


organism_name: Clostridium sp.


organism_name: Klebsiella oxytoca


organism_name: Dialister sp.


organism_name: Enterobacteriaceae bacterium


organism_name: Clostridioides difficile


organism_name: Finegoldia magna


organism_name: Klebsiella pneumoniae


organism_name: Enterobacter asburiae


organism_name: Enterococcus faecalis


excluded_from_refseq: unverified source organism; derived from metagenome


organism_name: Clostridium perfringens


organism_name: Actinomyces sp.


organism_name: Staphylococcus sp.


organism_name: Clostridiales bacterium


organism_name: Veillonella sp.


organism_name: Escherichia coli


organism_name: Staphylococcus aureus


organism_name: Clostridium butyricum


organism_name: Peptoniphilus lacydonensis


organism_name: Staphylococcus epidermidis


organism_name: Leuconostoc citreum


organism_name: Salmonella enterica


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Corynebacterium kroppenstedtii


organism_name: Staphylococcus lugdunensis


organism_name: Klebsiella pneumoniae


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Prevotella bivia


organism_name: Clostridioides difficile


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Campylobacter jejuni


organism_name: Klebsiella michiganensis


organism_name: Streptococcus agalactiae


organism_name: Aeromonas sp.


organism_name: Lactococcus lactis


organism_name: Escherichia coli


organism_name: Enterococcus faecalis


organism_name: Veillonella parvula


organism_name: Klebsiella grimontii


organism_name: Varibaculum cambriense


organism_name: Salmonella enterica subsp. enterica serovar Orion


organism_name: Staphylococcus epidermidis


organism_name: Salmonella enterica


organism_name: Acinetobacter baumannii


organism_name: Clostridium sp.


organism_name: Citrobacter freundii


organism_name: Finegoldia magna


organism_name: Enterobacter sp.


organism_name: Shigella sonnei


organism_name: Shigella flexneri


organism_name: Klebsiella pneumoniae


organism_name: Atlantibacter hermannii


organism_name: Klebsiella oxytoca


organism_name: Citrobacter portucalensis


organism_name: Enterobacteriaceae bacterium


organism_name: Klebsiella michiganensis


organism_name: Schaalia turicensis


organism_name: Anaerococcus sp.


organism_name: Clostridium saudiense


organism_name: Cutibacterium avidum


organism_name: Paenibacillus macerans


organism_name: Varibaculum cambriense


organism_name: Enterococcus faecalis


organism_name: Propionibacteriaceae bacterium


organism_name: Providencia rettgeri


organism_name: Staphylococcus epidermidis


organism_name: Shigella flexneri


organism_name: Campylobacter jejuni


organism_name: Klebsiella pneumoniae


organism_name: Escherichia coli


organism_name: Serratia marcescens


organism_name: Sneathia sanguinegens


organism_name: Metamycoplasma hominis


organism_name: Campylobacter coli


infraspecific_name: strain=Newport

organism_name: Salmonella enterica subsp. enterica


organism_name: Clostridioides difficile


infraspecific_name: strain=Anatum


organism_name: Clostridium perfringens


organism_name: Anaerococcus vaginalis


organism_name: Hafnia alvei


organism_name: Pseudomonas aeruginosa


infraspecific_name: strain=Altona


organism_name: Staphylococcus aureus


organism_name: Clostridium sp.


organism_name: Cutibacterium avidum


organism_name: Enterobacter sp.


organism_name: Enterococcus faecalis


organism_name: Actinomyces urogenitalis


organism_name: Veillonella parvula


organism_name: Haemophilus haemolyticus


organism_name: Finegoldia magna


organism_name: Escherichia coli


organism_name: Staphylococcus epidermidis


organism_name: Campylobacter coli


organism_name: Roseomonas mucosa


organism_name: Peptoniphilus harei


organism_name: Klebsiella sp.


organism_name: Corynebacterium kroppenstedtii


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Peptostreptococcaceae bacterium


organism_name: Streptococcus mitis


organism_name: Pseudomonas sp.


organism_name: Clostridia bacterium


organism_name: Acinetobacter baumannii


organism_name: Clostridium perfringens


organism_name: Pseudomonas aeruginosa


organism_name: Clostridium sp.


organism_name: Veillonella sp.


organism_name: Salmonella enterica


organism_name: Enterobacter sp.


organism_name: Corynebacterium sp.


organism_name: Staphylococcus aureus


organism_name: Staphylococcus epidermidis


organism_name: Streptococcus parasanguinis


organism_name: Enterococcus faecalis


organism_name: Streptococcus thermophilus


organism_name: Clostridioides difficile


organism_name: Varibaculum cambriense


organism_name: Acidovorax sp.


organism_name: Staphylococcus lugdunensis


organism_name: Aeromonas sp.


organism_name: Bacillus subtilis


organism_name: Bacteroides sp.


organism_name: Clostridium perfringens


organism_name: Bifidobacterium bifidum


organism_name: Bacteroides fragilis


organism_name: Escherichia coli


organism_name: Bacteroides caccae


organism_name: Bacteroides stercoris


organism_name: Streptococcus anginosus


organism_name: Parabacteroides sp.


organism_name: Streptococcus salivarius


organism_name: [Clostridium] symbiosum


organism_name: Akkermansia sp.


organism_name: Clostridium sp.


organism_name: Lachnospiraceae bacterium


organism_name: Enterobacter kobei


organism_name: Pseudomonas aeruginosa


organism_name: Stenotrophomonas maltophilia


organism_name: Haemophilus parainfluenzae


organism_name: Enterococcus faecalis


organism_name: Anaerococcus vaginalis


organism_name: Campylobacter jejuni


organism_name: Veillonella dispar


organism_name: Campylobacter coli


organism_name: Klebsiella michiganensis


excluded_from_refseq: derived from metagenome; genome length too small


organism_name: Klebsiella grimontii


excluded_from_refseq: contaminated; derived from metagenome; genus undefined

organism_name: Bacillota bacterium


excluded_from_refseq: annotation fails completeness check; derived from metagenome

organism_name: Citrobacter sp.


organism_name: Citrobacter freundii


organism_name: Staphylococcus sp.


organism_name: Klebsiella pneumoniae


organism_name: Escherichia coli


organism_name: Corynebacterium sp.


organism_name: Helicobacter sp.


organism_name: Staphylococcus epidermidis


organism_name: Serratia marcescens


organism_name: Clostridium perfringens


organism_name: Clostridium butyricum


organism_name: Salmonella enterica


organism_name: Actinomyces sp.


organism_name: Campylobacter jejuni


organism_name: Clostridium sp.


organism_name: Veillonella sp.


organism_name: Cutibacterium avidum


organism_name: Pseudomonas aeruginosa


organism_name: Enterococcus faecalis


organism_name: Cutibacterium granulosum


organism_name: Enterobacter asburiae


organism_name: Citrobacter braakii


organism_name: Streptococcus sp.


organism_name: Escherichia coli


organism_name: Aeromonas caviae


asm_submitter: The University of Melbourne

organism_name: Pseudomonas syringae pv. actinidiae


organism_name: Pseudomonas syringae group sp. J309-1


organism_name: Clostridium perfringens


organism_name: Clostridioides difficile


organism_name: Corynebacterium sp.


organism_name: Aggregatibacter aphrophilus


organism_name: Citrobacter freundii


organism_name: Pantoea sp.


organism_name: Blautia sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; many frameshifted proteins

organism_name: Veillonella parvula


organism_name: Klebsiella sp.


organism_name: Veillonella sp.


organism_name: Atlantibacter hermannii


organism_name: Enterococcus faecalis


organism_name: Klebsiella pneumoniae


organism_name: Serratia marcescens


organism_name: Staphylococcus epidermidis


organism_name: Enterobacter hormaechei


excluded_from_refseq: unverified source organism; derived from metagenome; genus undefined

organism_name: Bacillota bacterium


organism_name: Clostridium perfringens


organism_name: Escherichia coli


organism_name: Pseudomonas aeruginosa


organism_name: Streptococcus agalactiae


organism_name: Ureaplasma parvum


organism_name: Finegoldia magna


organism_name: Klebsiella michiganensis


organism_name: Streptococcus lutetiensis


organism_name: Citrobacter freundii


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small


organism_name: Clostridium sp.


organism_name: Streptococcus salivarius


organism_name: Veillonella sp.


organism_name: Enterococcus faecalis


organism_name: Peptostreptococcaceae bacterium


organism_name: Klebsiella grimontii


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; many frameshifted proteins

organism_name: Veillonella parvula


organism_name: Haemophilus parainfluenzae


organism_name: Streptococcus sp.


organism_name: Enterobacter hormaechei


organism_name: Paraclostridium sordellii


organism_name: Klebsiella sp.


organism_name: Clostridium perfringens


organism_name: Clostridioides difficile


organism_name: Gemella haemolysans


organism_name: Neisseria sp.


organism_name: Cutibacterium avidum


organism_name: Eggerthella sp.


asm_submitter: Sungkyunkwan University

organism_name: Gilvirhabdus luticola

relation_to_type_material: assembly from type material


asm_submitter: Blokhina Scientific Research Institute of Epidemiology and Microbiology of Nizhny Novgorod

organism_name: Klebsiella pneumoniae


organism_name: Staphylococcus aureus


asm_submitter: University of Montana

excluded_from_refseq: contaminated

organism_name: Wolbachia endosymbiont of Drosophila malagassya


organism_name: Wolbachia endosymbiont of Drosophila seguyi


organism_name: Wolbachia endosymbiont of Scaptomyza pallida

refseq_category: reference genome


organism_name: Wolbachia endosymbiont of Drosophila tristis


organism_name: Wolbachia endosymbiont of Drosophila bocqueti


asm_submitter: University Medical Center Groningen

organism_name: Faecalibacterium prausnitzii


organism_name: Collinsella aerofaciens


infraspecific_name: strain=ATCC 27768


infraspecific_name: strain=HTF-F

organism_name: Faecalibacterium wellingii


organism_name: Escherichia coli


organism_name: Clostridioides difficile


organism_name: Campylobacter jejuni


asm_submitter: CDC

organism_name: Salmonella enterica


organism_name: Vibrio vulnificus


organism_name: Pluralibacter gergoviae


organism_name: Aliisedimentitalea sp. MJ-SS2


organism_name: Ovoidimarina sediminis


asm_submitter: CHU Dupuytren

excluded_from_refseq: genus undefined

organism_name: Pasteurellaceae bacterium LIM206


organism_name: Aestuariicoccus sp. MJ-SS9


annotation_name: Annotation submitted by Radboudumc

annotation_provider: Radboudumc

asm_submitter: Radboudumc

organism_name: Lactococcus cremoris


excluded_from_refseq: unverified source organism; from large multi-isolate project

organism_name: Pseudomonas syringae


excluded_from_refseq: from large multi-isolate project

organism_name: Pseudomonas syringae pv. actinidiae


organism_name: Shigella sonnei


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Pseudomonas syringae group sp. J254-4


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Pseudomonas syringae group sp. J248-6


organism_name: Salmonella enterica


organism_name: Pseudomonas syringae pv. actinidifoliorum


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Adelaide


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Altona


organism_name: Campylobacter coli


organism_name: Pseudomonas syringae pv. actinidiae


organism_name: Pseudomonas syringae


organism_name: Pseudomonas syringae group sp. 247E2


organism_name: Pseudomonas syringae group sp. 26L6


organism_name: Campylobacter jejuni


organism_name: Pseudomonas syringae group sp. 243L2


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Escherichia coli


organism_name: Vibrio cholerae


asm_submitter: National Center for Biotechnology Information

organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Worthington


organism_name: Salmonella enterica subsp. enterica serovar Liverpool


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Tennessee


organism_name: Burkholderia multivorans


organism_name: Burkholderia cenocepacia


organism_name: Clostridioides difficile


asm_submitter: Health Protection Agency


asm_submitter: FDA Center for Food Safety and Applied Nutrition


annotation_name: Annotation submitted by Georg-August-University Goettingen

annotation_provider: Georg-August-University Goettingen

asm_submitter: Georg-August-University Goettingen

group: archaea

organism_name: Methanimicrococcus hongohii


organism_name: Methanolapillus millepedarum


asm_submitter: Banfield Lab, University of California, Berkeley

excluded_from_refseq: derived from metagenome

organism_name: Bifidobacterium scardovii


organism_name: Lacticaseibacillus rhamnosus


organism_name: Bifidobacterium breve


organism_name: Veillonella sp.


organism_name: Clostridium sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Bifidobacterium sp.


organism_name: Klebsiella oxytoca


organism_name: Lactobacillus paragasseri


organism_name: Streptococcus sp.


organism_name: Clostridium perfringens


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Bacteroides sp.


organism_name: Methanolapillus ohkumae


organism_name: Ligilactobacillus animalis


organism_name: Staphylococcus epidermidis


organism_name: Methanimicrococcus stummii


asm_submitter: Institute for Sustainable Agriculture - CSIC

organism_name: Xylella fastidiosa


asm_submitter: University of Manitoba

excluded_from_refseq: many frameshifted proteins

organism_name: Acinetobacter calcoaceticus


asm_submitter: All-Russia Research Institute for Agricultural Microbiology

assembly_level: Chromosome

excluded_from_refseq: unverified source organism; annotation fails completeness check; many frameshifted proteins

organism_name: Curtobacterium flaccumfaciens


asm_submitter: Austrian Agency for Health and Food Safety

organism_name: Bordetella parapertussis


asm_submitter: QAAFI

organism_name: Campylobacter fetus subsp. fetus


asm_submitter: USDA-ARS

organism_name: Streptococcus suivaginalis


organism_name: Streptococcus iners subsp. hyiners


organism_name: Streptococcus iners


asm_submitter: Medical College of Wisconsin

infraspecific_name: strain=T

organism_name: Bacillus cereus


asm_submitter: Third Institute of Oceanography, Ministry of Natural Resources of PR China

organism_name: Sedimentitalea todarodis


asm_submitter: Institute for Genome Sciences

organism_name: Borreliella burgdorferi


asm_submitter: Technical University of Denmark

organism_name: Streptomyces mirabilis


excluded_from_refseq: RefSeq annotation failed; genome length too small

organism_name: Borreliella bissettiae


organism_name: Escherichia coli


organism_name: Acinetobacter baumannii


organism_name: Phocaeicola vulgatus


asm_submitter: Aarhus University

organism_name: Candidatus Electrothrix rattekaaiensis


organism_name: Candidatus Electrothrix aestuarii


asm_submitter: CDC

organism_name: Salmonella enterica


excluded_from_refseq: RefSeq annotation failed

organism_name: Borreliella carolinensis


organism_name: Borreliella americana


organism_name: Streptococcus sp.


organism_name: Clostridium perfringens


organism_name: Borreliella andersonii


organism_name: [Borrelia] lusitaniae


organism_name: Pseudomonas aeruginosa


asm_submitter: SRCAMB

infraspecific_name: strain=SCPM-O-B-9578 (58TKP/19h)

organism_name: Klebsiella pneumoniae


infraspecific_name: strain=SCPM-O-B-9581 (41TKP/19h)


infraspecific_name: strain=SCPM-O-B-9577 (19PKP/19h)


infraspecific_name: strain=SCPM-O-B-9563 (32PKP/19c)


asm_submitter: FDA


infraspecific_name: strain=SCPM-O-B-9554 (7TKP/19b-1)


infraspecific_name: strain=SCPM-O-B-9548 (6PKP/19a)


infraspecific_name: strain=SCPM-O-B-9572 (3PKP/19g-2)

organism_name: Klebsiella aerogenes


infraspecific_name: strain=SCPM-O-B-9569 (31PKP/19f)


infraspecific_name: strain=SCPM-O-B-9571 (36TKP/19f)


infraspecific_name: strain=SCPM-O-B-9570 (36PKP/19f)


infraspecific_name: strain=SCPM-O-B-9561 (29PKP/19c)


infraspecific_name: strain=SCPM-O-B-9556 (15PKP/19b)


excluded_from_refseq: fragmented assembly; from large multi-isolate project

infraspecific_name: strain=SCPM-O-B-9558 (3PKP/19c)


infraspecific_name: strain=SCPM-O-B-9551 (13PKP/19a)


infraspecific_name: strain=SCPM-O-B-9550 (11TKP/19a)


infraspecific_name: strain=SCPM-O-B-9549 (7TKP/19a)


excluded_from_refseq: contaminated; from large multi-isolate project


asm_submitter: USDA FSIS

organism_name: Campylobacter jejuni


infraspecific_name: strain=SCPM-O-B-9579 (34TKP/19h)


infraspecific_name: strain=SCPM-O-B-9580 (50TKP/19h)


infraspecific_name: strain=SCPM-O-B-9575 (15TKP/19h)


infraspecific_name: strain=SCPM-O-B-9568 (34TKP/19d)


organism_name: Campylobacter coli


infraspecific_name: strain=SCPM-O-B-9574 (48TKP/19g)


infraspecific_name: strain=SCPM-O-B-9555 (8PKP/19b)


infraspecific_name: strain=SCPM-O-B-9567 (34PKP/19d)


infraspecific_name: strain=SCPM-O-B-9565 (29PKP/19d)


infraspecific_name: strain=SCPM-O-B-9573 (19TKP/19g)

organism_name: Escherichia coli


infraspecific_name: strain=SCPM-O-B-9564 (15TKP/19d)


infraspecific_name: strain=SCPM-O-B-9560 (20TKP/19c)


infraspecific_name: strain=SCPM-O-B-9559 (19PKP/19c)


infraspecific_name: strain=SCPM-O-B-9562 (31PKP/19c)


infraspecific_name: strain=SCPM-O-B-9553 (6PKP/19b)


infraspecific_name: strain=SCPM-O-B-9566 (32TKP/19d)


infraspecific_name: strain=SCPM-O-B-9547 (10PKP/19a)


infraspecific_name: strain=SCPM-O-B-9545 (1PKP/19g)


infraspecific_name: strain=SCPM-O-B-9576 (59TKP/19h)


infraspecific_name: strain=SCPM-O-B-9544 (9PKP/19a)


infraspecific_name: strain=SCPM-O-B-9543 (1TKP/19a-1)


organism_name: Clostridioides difficile


asm_submitter: FDA/CFSAN


organism_name: Borreliella californiensis


asm_submitter: Centers for Disease Control and Prevention


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Klebsiella michiganensis


asm_submitter: Sichuan Agricultural University

organism_name: Pasteurella multocida


asm_submitter: Public Health Agency of Canada

organism_name: Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-


asm_submitter: China National Centre for Food Safety Risk Assessment

infraspecific_name: strain=CFSA A137

organism_name: Cronobacter dublinensis


asm_submitter: Universiti Tunku Abdul Rahman

organism_name: Leclercia adecarboxylata


asm_submitter: Georg-August-University Goettingen

infraspecific_name: strain=JCM 19845

organism_name: Terrisporobacter petrolearius


asm_submitter: University of Veterinary and Animal Sciences, Lahore

organism_name: Salmonella enterica subsp. enterica serovar Gallinarum


organism_name: Limosilactobacillus fermentum


annotation_name: Annotation submitted by National University of Singapore

annotation_provider: National University of Singapore

asm_submitter: National University of Singapore

infraspecific_name: strain=SP

organism_name: Sulfurospirillum sp. 'SP'


asm_submitter: Guangxi University

organism_name: Paenarthrobacter ureafaciens


asm_submitter: Jiangsu Academy of Agricultural Sciences

organism_name: Streptomyces sp. 11x1


asm_submitter: Beijing Institute of Microbiology and Epidemiology

organism_name: Pseudomonas aeruginosa


asm_submitter: Marquette University

organism_name: Bacillus subtilis


asm_submitter: Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences

organism_name: Leptolyngbya sp. NK1-12


asm_submitter: Japan Agency for Marine-Earth Science and technology

excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Candidatus Bathyarchaeota archaeon


asm_submitter: ANSES

organism_name: Escherichia coli


asm_submitter: University of Washington Laboratory Medicine

infraspecific_name: strain=WiscTPLN

organism_name: Treponema pallidum


organism_name: Acinetobacter baumannii


asm_submitter: National Center for Biotechnology Information


organism_name: Vibrio cholerae


organism_name: Salmonella enterica subsp. enterica serovar Typhi


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


organism_name: Citrobacter freundii


organism_name: Klebsiella pneumoniae


organism_name: Proteus mirabilis


organism_name: Klebsiella variicola


organism_name: Citrobacter braakii


organism_name: Enterobacter hormaechei


asm_submitter: Chinese Academey of Agricultural Sciences

organism_name: Enterobacter hormaechei subsp. xiangfangensis


asm_submitter: Mahidol University

organism_name: Staphylococcus pseudintermedius


organism_name: Staphylococcus ureilyticus


asm_submitter: West China Hospital, Sichuan University

organism_name: Klebsiella sp. 141203


organism_name: Klebsiella sp. 141153


organism_name: Staphylococcus haemolyticus


organism_name: Escherichia coli


organism_name: Serratia marcescens


organism_name: Staphylococcus warneri


asm_submitter: Maastricht University

organism_name: Lactiplantibacillus plantarum


organism_name: Acinetobacter baumannii


organism_name: Klebsiella ornithinolytica


organism_name: Staphylococcus aureus


organism_name: Klebsiella pneumoniae


organism_name: Pseudomonas aeruginosa


organism_name: Staphylococcus coagulans


organism_name: Proteus mirabilis


organism_name: Citrobacter freundii


organism_name: Staphylococcus pseudintermedius


asm_submitter: US Food and Drug Administration


asm_submitter: Bavarian Health and Food Safety Authority

organism_name: Borreliella garinii


asm_submitter: Georg-August-University Goettingen

organism_name: Methanocorpusculaceae archaeon Sp1


organism_name: Enterobacter hormaechei


asm_submitter: West Virginia Department of Agriculture

organism_name: Listeria innocua


organism_name: Escherichia coli


organism_name: Providencia rettgeri


asm_submitter: Megan Young

organism_name: Listeria monocytogenes


asm_submitter: CDC


organism_name: Salmonella enterica


asm_submitter: USDA FSIS

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar London


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Meleagridis


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


asm_submitter: Centers for Disease Control and Prevention

organism_name: Clostridioides difficile


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


organism_name: Acinetobacter baumannii


organism_name: Pseudomonas aeruginosa


organism_name: Klebsiella oxytoca


organism_name: Klebsiella pneumoniae


organism_name: Enterobacter hormaechei


organism_name: Proteus mirabilis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


infraspecific_name: strain=Microbial


organism_name: Borreliella garinii


organism_name: Escherichia coli


organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Panama


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Uganda


asm_submitter: FDA Center for Food Safety and Applied Nutrition


organism_name: Salmonella enterica


asm_submitter: Public Health Agency of Canada

organism_name: Salmonella enterica subsp. enterica serovar Typhi


asm_submitter: Vet-LIRN-CVM-FDA


asm_submitter: National Center for Biotechnology Information


asm_submitter: Chengdu University

organism_name: Streptococcus pluranimalium


asm_submitter: BGI

organism_name: Myxococcus sp. MxC21-1


organism_name: Listeria monocytogenes


organism_name: Shigella sonnei


asm_submitter: Agroscope

organism_name: Pseudomonas sp. P108


organism_name: Shigella flexneri


asm_submitter: FDA/CFSAN


organism_name: Pseudomonas sp. P105


asm_submitter: CSIR-NEERI

organism_name: Pseudomonas aeruginosa


organism_name: Campylobacter fetus


organism_name: Escherichia coli


asm_submitter: Georgia Institute of Technology

organism_name: Microbulbifer sp. MKSA007


asm_submitter: A*STAR

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

infraspecific_name: strain=Si 7-21

organism_name: Streptococcus iniae


organism_name: Campylobacter jejuni


asm_submitter: Public Health England

organism_name: Vibrio cholerae


asm_submitter: CDC

organism_name: Vibrio alginolyticus


organism_name: Salmonella enterica


organism_name: Vibrio parahaemolyticus


organism_name: Vibrio vulnificus


organism_name: Vibrio navarrensis


organism_name: Listeria monocytogenes


infraspecific_name: strain=Si 6-21


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Typhi


organism_name: Yersinia enterocolitica


organism_name: Shigella sonnei


infraspecific_name: strain=Si 4-21


organism_name: Pseudomonas aeruginosa


organism_name: Acinetobacter baumannii


organism_name: Klebsiella pneumoniae


organism_name: Enterobacter cloacae


organism_name: Escherichia coli


infraspecific_name: strain=Si 1-19

organism_name: Streptococcus iniae


organism_name: Campylobacter jejuni


asm_submitter: Huangshan University

organism_name: Leptolyngbya boryana CZ1


organism_name: Salmonella enterica


asm_submitter: FDA


asm_submitter: Centers for Disease Control and Prevention


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


asm_submitter: National Taiwan University Hospital

organism_name: Oscillospiraceae bacterium NTUH-002-81


organism_name: Vibrio cholerae


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Rissen


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Rubislaw


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Thompson


organism_name: Campylobacter coli


organism_name: Escherichia coli


asm_submitter: Baylor College of Medicine

organism_name: Pseudomonas sp. zfem003


organism_name: Pseudomonas sp. zfem002


organism_name: Pseudomonas sp. zfem004


organism_name: Pseudomonas sp. zfem001


organism_name: Pseudomonas sp. zfem005


organism_name: Shigella sonnei


organism_name: Salmonella enterica


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Typhi


infraspecific_name: strain=NEHA

isolate: NEHA


infraspecific_name: strain=CB Si-1

organism_name: Streptococcus iniae


organism_name: Campylobacter jejuni


infraspecific_name: strain=Si 8-21


asm_submitter: Mahidol University

organism_name: Staphylococcus lloydii


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


organism_name: Pseudomonas aeruginosa


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


asm_submitter: USDA FSIS


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Alachua


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Barranquilla


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Salmonella enterica subsp. enterica serovar Lubbock


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: National Center for Biotechnology Information

organism_name: Salmonella enterica subsp. enterica serovar Typhi


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica


organism_name: Morganella morganii


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Eppendorf


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Brandenburg


asm_name: Tricycler

infraspecific_name: strain=CVM N17C264


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Klebsiella pneumoniae


organism_name: Acinetobacter baumannii


organism_name: Salmonella enterica


organism_name: Klebsiella variicola


organism_name: Legionella pneumophila


organism_name: Escherichia coli


organism_name: Vibrio parahaemolyticus


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Javiana


organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


isolate: clinical

organism_name: Enterobacter hormaechei subsp. hoffmannii


organism_name: Enterobacter hormaechei subsp. xiangfangensis


organism_name: Citrobacter koseri


organism_name: Serratia marcescens


organism_name: Shigella sonnei


organism_name: Vibrio cholerae


organism_name: Klebsiella pneumoniae


organism_name: Yersinia enterocolitica


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Indiana


organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Meleagridis


asm_submitter: Center for Food Safety and Applied Nutrition


organism_name: Acinetobacter baumannii


organism_name: Vibrio cholerae


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Shigella flexneri


infraspecific_name: strain=Inaba


infraspecific_name: strain=Ogawa


organism_name: Enterobacter kobei


organism_name: Enterobacter hormaechei


asm_submitter: Utah Public Health Laboratory Infectious Disease submission group

organism_name: Klebsiella aerogenes


organism_name: Klebsiella pneumoniae


organism_name: Pseudomonas aeruginosa


organism_name: Enterobacter ludwigii


infraspecific_name: strain=oral taxon 865. F0526

organism_name: Kluyvera ascorbata F0526


isolate: Burr Oak


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


infraspecific_name: strain=SX 245

organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


infraspecific_name: strain=SX 244


organism_name: Staphylococcus aureus


organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


organism_name: Citrobacter amalonaticus


organism_name: Salmonella enterica subsp. enterica serovar Kiambu


organism_name: Salmonella enterica


organism_name: Klebsiella quasipneumoniae


asm_submitter: FDA/CFSAN

organism_name: Listeria monocytogenes


organism_name: Enterobacter roggenkampii


organism_name: Acinetobacter baumannii


organism_name: Bacillus cereus


organism_name: Escherichia coli


organism_name: Legionella pneumophila


organism_name: Klebsiella pneumoniae


organism_name: Klebsiella variicola


isolate: Dog

organism_name: Clostridioides difficile


infraspecific_name: strain=VUM

organism_name: Vibrio cholerae


organism_name: Aeromonas dhakensis


organism_name: Klebsiella michiganensis


organism_name: Enterobacter hormaechei subsp. steigerwaltii


organism_name: Aeromonas hydrophila subsp. hydrophila


organism_name: Enterobacter asburiae


organism_name: Salmonella enterica


organism_name: Shigella flexneri


asm_submitter: FDA Center for Food Safety and Applied Nutrition


organism_name: Escherichia coli O157


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


isolate: whole organism

organism_name: Pseudomonas aeruginosa


organism_name: Shigella sonnei


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Citrobacter amalonaticus


organism_name: Klebsiella ornithinolytica


organism_name: Citrobacter freundii


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Meleagridis


organism_name: Salmonella enterica subsp. enterica serovar Panama


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Apapa


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Lubbock


organism_name: Pseudomonas aeruginosa


organism_name: Salmonella enterica


isolate: Culture

organism_name: Mannheimia haemolytica


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Acinetobacter baumannii


organism_name: Salmonella enterica subsp. enterica serovar Brandenburg


asm_submitter: Saint-Petersburg Pasteur Institute

organism_name: Helicobacter pylori


organism_name: Salmonella enterica subsp. enterica serovar Poona


organism_name: Listeria monocytogenes


asm_submitter: Chulalongkorn University

organism_name: Priestia aryabhattai


organism_name: Aeromonas hydrophila


asm_submitter: Christian Medical College

organism_name: Klebsiella pneumoniae


asm_submitter: South China Agricultural University

organism_name: Escherichia coli


excluded_from_refseq: annotation fails completeness check


asm_submitter: CDC


asm_submitter: FDA

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


asm_submitter: Centers for Disease Control and Prevention


organism_name: Salmonella enterica


asm_submitter: Yonsei University


organism_name: Vibrio fluvialis


asm_submitter: IMR

organism_name: Vibrio sp. 1-2-3a


organism_name: Vibrio sp. 2-1-2a


asm_submitter: University of Pennsylvania

organism_name: Staphylococcus aureus


organism_name: Vibrio cholerae


organism_name: Shigella flexneri


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


asm_submitter: USDA FSIS


asm_submitter: National Center for Biotechnology Information


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Pseudomonas aeruginosa


asm_submitter: Shenzhen University

organism_name: Mycobacterium tuberculosis


asm_submitter: NWO- Dunea–Vitens: Sand Filtration partnership

organism_name: Anaeromyxobacteraceae bacterium


asm_submitter: CSIR-NCL

organism_name: Bacillus halotolerans


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Devosia sp.


organism_name: Gallionellaceae bacterium


organism_name: Salmonella enterica


organism_name: Chitinophagaceae bacterium


organism_name: Salmonella enterica subsp. enterica serovar Infantis