asm_submitter: Icahn School of Medicine

assembly_level: Contig

assembly_type: haploid

excluded_from_refseq: from large multi-isolate project

genome_rep: Full

group: bacteria

organism_name: Enterococcus faecium

paired_asm_comp: identical

release_type: Major

version_status: latest


organism_name: Enterococcus faecalis


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: National Center for Biotechnology Information

infraspecific_name: strain=Human

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


infraspecific_name: strain=Chicken


infraspecific_name: strain=Wild bird


organism_name: Pseudomonas aeruginosa


organism_name: Klebsiella pneumoniae


infraspecific_name: strain=Pig


asm_submitter: FDA


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Escherichia coli


asm_submitter: Liverpool School of Tropical Medicine

organism_name: Streptococcus pneumoniae


asm_submitter: Quanzhou Normal University

excluded_from_refseq: genus undefined

organism_name: Halieaceae bacterium WSDMB12


organism_name: Cellvibrionaceae bacterium SEMH9


asm_submitter: CDC

organism_name: Salmonella enterica


organism_name: Halieaceae bacterium GM1-29


organism_name: Enterobacter kobei


organism_name: Halieaceae bacterium WMMBA4


organism_name: Cellvibrionaceae bacterium WSDTSA12


organism_name: Halieaceae bacterium WMMBA7


organism_name: Halioxenophilus sp. WMMB6


asm_submitter: North-West University

infraspecific_name: strain=NWU MK-U1

organism_name: Staphylococcus sp. NWU MK-U1


infraspecific_name: strain=NWU MK-S

organism_name: Staphylococcus sp. NWU MK-S


asm_submitter: \The First Affiliated Hospital, School of Medicine, Zhejiang University

organism_name: Enterococcus faecium


infraspecific_name: strain=NWU MKU2

organism_name: Staphylococcus sp. NWU MKU2


asm_submitter: USDA FSIS

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Escherichia coli


excluded_from_refseq: contaminated; from large multi-isolate project

organism_name: Klebsiella oxytoca


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Citrobacter freundii


organism_name: Pseudomonas aeruginosa


organism_name: Klebsiella planticola


organism_name: Salmonella enterica


organism_name: Shigella sonnei


asm_submitter: Brigham & Women's Hospital


organism_name: Klebsiella michiganensis


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Enterococcus faecalis


asm_submitter: Public Health England

organism_name: Vibrio parahaemolyticus


organism_name: Yersinia enterocolitica


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


organism_name: Shigella flexneri


organism_name: Vibrio vulnificus


organism_name: Vibrio cholerae


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


asm_submitter: Center for Food Safety and Applied Nutrition


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica


asm_submitter: Korea Research Institute of Bioscience and Biotechnology (KRIBB)

assembly_level: Complete Genome

organism_name: Sporosarcina jeotgali

refseq_category: reference genome

relation_to_type_material: assembly from type material


organism_name: Sporosarcina oncorhynchi


organism_name: Salmonella enterica


asm_submitter: National Antimicrobial Resistance Monitoring System


isolate: Key


organism_name: Bacillus cereus


asm_submitter: University Hospital Muenster

organism_name: Clostridioides difficile


asm_submitter: National Center for Biotechnology Information

organism_name: Campylobacter jejuni


asm_submitter: Cornell University

infraspecific_name: strain=WRB ZX-0001

organism_name: Bacillus velezensis


asm_submitter: Instituto Adolfo Lutz

infraspecific_name: strain=SAL 288_18

organism_name: Salmonella enterica subsp. enterica serovar Agona


asm_submitter: Military Health Institute

organism_name: Bartonella gliris


asm_submitter: Universidad Autonoma Metropolitana. Lerma

organism_name: Vreelandella venusta


asm_submitter: PathWest Laboratory Medicine


assembly_level: Chromosome


asm_submitter: FDA


asm_submitter: CDC


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Pseudomonas aeruginosa


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Klebsiella planticola


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Salmonella enterica


organism_name: Pseudomonas putida


organism_name: Enterobacter kobei


organism_name: Klebsiella oxytoca


organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


organism_name: Shigella boydii


infraspecific_name: strain=Poultry


infraspecific_name: strain=Sheep


infraspecific_name: strain=Cattle


organism_name: Escherichia coli


asm_submitter: USDA FSIS


organism_name: Salmonella enterica subsp. enterica serovar Urbana


organism_name: Salmonella enterica subsp. enterica serovar Vinohrady


organism_name: Salmonella enterica subsp. enterica serovar Nima


organism_name: Salmonella enterica subsp. enterica serovar Fresno


asm_submitter: FDA Center for Food Safety and Applied Nutrition

organism_name: Listeria monocytogenes


organism_name: Yersinia enterocolitica


organism_name: Acinetobacter baumannii


organism_name: Providencia rettgeri


organism_name: Klebsiella pneumoniae


organism_name: Salmonella enterica


organism_name: Shigella sonnei


asm_submitter: Centers for Disease Control and Prevention


organism_name: Shigella flexneri


organism_name: Klebsiella planticola


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


organism_name: Enterobacter hormaechei


isolate: clinical

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Campylobacter coli


organism_name: Escherichia coli


asm_submitter: Mississippi State University-College of Veterinary Medicine

organism_name: Mannheimia haemolytica


asm_submitter: University of Pittsburgh

organism_name: Pseudomonas aeruginosa


asm_submitter: Korea Institute of Science and Technology

organism_name: Streptomyces sp. N50


asm_submitter: Makerere University


asm_submitter: The Hong Kong Polytechnic University

assembly_level: Scaffold

organism_name: Vibrio sp. YT-18


organism_name: Vibrio sp. YT-17


organism_name: Vibrio sp. YT-19(2023)


organism_name: Vibrio sp. YT-16


organism_name: Vibrio sp. Y159


organism_name: Vibrio sp. YT-15


organism_name: Vibrio sp. Vb5035


organism_name: Vibrio sp. Vb5032


organism_name: Vibrio sp. Vb5034


organism_name: Vibrio sp. Vb5031


organism_name: Vibrio sp. Vb5029


organism_name: Vibrio sp. Vb2979


organism_name: Vibrio sp. Vb2977


organism_name: Vibrio sp. Vb2976


organism_name: Vibrio sp. Vb2960


organism_name: Vibrio sp. Vb2944


organism_name: Vibrio sp. Vb2942


organism_name: Vibrio sp. Vb2917


organism_name: Vibrio sp. Vb2912


organism_name: Vibrio sp. Vb2911


organism_name: Vibrio sp. Vb2910


organism_name: Vibrio sp. Vb2908


organism_name: Vibrio sp. Vb2909


organism_name: Vibrio sp. Vb2907


organism_name: Vibrio sp. Vb2898


organism_name: Vibrio sp. Vb2897


organism_name: Vibrio sp. Vb2896


organism_name: Vibrio sp. Vb2892


organism_name: Vibrio sp. Vb2881


organism_name: Vibrio sp. Vb2880


organism_name: Vibrio sp. Vb2873


organism_name: Vibrio sp. Vb2853


organism_name: Vibrio sp. Vb2704


organism_name: Vibrio sp. Vb2658


organism_name: Vibrio sp. Vb2657


organism_name: Vibrio sp. Vb2656


organism_name: Vibrio sp. Vb2628


organism_name: Vibrio sp. Vb2610


organism_name: Vibrio sp. Vb2535


excluded_from_refseq: fragmented assembly

organism_name: Vibrio sp. Vb2362


organism_name: Vibrio sp. Vb2864


organism_name: Vibrio sp. Vb2865


organism_name: Vibrio sp. Vb2356


organism_name: Vibrio sp. Vb2354


organism_name: Vibrio sp. Vb2321


organism_name: Vibrio sp. Vb2353


organism_name: Vibrio sp. Vb2297


organism_name: Vibrio sp. Vb2232


organism_name: Vibrio sp. Vb2235


organism_name: Vibrio sp. Vb2227


organism_name: Vibrio sp. Vb2201


organism_name: Vibrio sp. Vb2532


organism_name: Vibrio sp. Vb2175


organism_name: Vibrio sp. Vb2135


organism_name: Vibrio sp. Vb2531


organism_name: Vibrio sp. Vb2134


organism_name: Vibrio sp. Vb2133


organism_name: Vibrio sp. Vb2131


organism_name: Vibrio sp. Vb2130


organism_name: Vibrio sp. Vb2132


organism_name: Vibrio sp. Vb2110


organism_name: Vibrio sp. Vb1980


organism_name: Vibrio sp. Vb1755


organism_name: Vibrio sp. Vb1729


organism_name: Vibrio sp. Vb1574


organism_name: Vibrio sp. Vb1166


organism_name: Vibrio sp. Vb1337


organism_name: Vibrio sp. Vb1127


organism_name: Vibrio sp. Vb1026


organism_name: Vibrio sp. Vb1018


organism_name: Vibrio sp. Vb1076


organism_name: Vibrio sp. Vb0974


organism_name: Vibrio sp. Vb0888


organism_name: Vibrio sp. Vb0937


organism_name: Vibrio sp. Vb0839


organism_name: Vibrio sp. Vb0718


organism_name: Vibrio sp. Vb0599


organism_name: Vibrio sp. Vb0598


organism_name: Vibrio sp. Vb0587


organism_name: Vibrio sp. Vb0349


organism_name: Vibrio sp. Vb0304


organism_name: Vibrio sp. Vb0562


organism_name: Vibrio sp. Vb0301


organism_name: Vibrio sp. 977


organism_name: Vibrio sp. 970


excluded_from_refseq: annotation fails completeness check

organism_name: Vibrio sp. 945


organism_name: Vibrio sp. 947


organism_name: Vibrio sp. 818


organism_name: Vibrio sp. 780


organism_name: Vibrio sp. 811


organism_name: Vibrio sp. 736


organism_name: Vibrio sp. 708


organism_name: Vibrio sp. 707


organism_name: Vibrio sp. 705


organism_name: Vibrio sp. 704


organism_name: Vibrio sp. 661


organism_name: Vibrio sp. 665


organism_name: Vibrio sp. 431


organism_name: Vibrio sp. 506


organism_name: Vibrio sp. 397


organism_name: Vibrio sp. 399


organism_name: Vibrio sp. 378


organism_name: Vibrio sp. 299


organism_name: Vibrio sp. 2304


organism_name: Vibrio sp. 2134-1


organism_name: Vibrio sp. 2130-1


organism_name: Vibrio sp. 2175-1


organism_name: Vibrio sp. 2096


organism_name: Vibrio sp. 2099


organism_name: Vibrio sp. 2092


organism_name: Vibrio sp. 2091


organism_name: Vibrio sp. 2089


organism_name: Vibrio sp. 2084


organism_name: Vibrio sp. 2026


organism_name: Vibrio sp. 2033


organism_name: Vibrio sp. 2025


organism_name: Vibrio sp. 1942


organism_name: Vibrio sp. 1982


organism_name: Vibrio sp. 1863


organism_name: Vibrio sp. 1866


organism_name: Vibrio sp. 1833


organism_name: Vibrio sp. 1733


organism_name: Vibrio sp. 1751


organism_name: Vibrio sp. 1761


organism_name: Vibrio sp. 1762


organism_name: Vibrio sp. 1731


organism_name: Vibrio sp. 1640


organism_name: Vibrio sp. 1641


organism_name: Vibrio sp. 1637


organism_name: Vibrio sp. 1636


organism_name: Vibrio sp. 1580


organism_name: Vibrio sp. 1579


organism_name: Vibrio sp. 1567


organism_name: Vibrio sp. 1565-1


organism_name: Vibrio sp. 1569


organism_name: Vibrio sp. 1562


organism_name: Vibrio sp. 1557


organism_name: Vibrio sp. 1457


organism_name: Vibrio sp. 1456-1


organism_name: Vibrio sp. 1404


organism_name: Vibrio sp. 1409


organism_name: Vibrio sp. 1402


organism_name: Vibrio sp. 1401


organism_name: Vibrio sp. 1394


organism_name: Vibrio sp. 1287


organism_name: Vibrio sp. 1075


organism_name: Vibrio sp. 1167


organism_name: Vibrio sp. 1159


organism_name: Vibrio sp. 1074


asm_submitter: Zhejiang University

organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Vibrio sp. 1078-1


organism_name: Vibrio sp. 1249-1


organism_name: Vibrio sp. 1262-1


organism_name: Vibrio sp. 1069


asm_submitter: The First Affiliated Hospital of Henan University of Science and Technology

organism_name: Klebsiella pneumoniae


organism_name: Escherichia coli


organism_name: Enterobacter hormaechei


organism_name: Citrobacter portucalensis


organism_name: Citrobacter braakii


organism_name: Citrobacter sp. HN-144


organism_name: Citrobacter sp. HN-141


organism_name: Citrobacter sp. HN-120


organism_name: Klebsiella quasipneumoniae


organism_name: Klebsiella planticola


organism_name: Klebsiella pasteurii


organism_name: Citrobacter freundii


organism_name: Atlantibacter subterraneus


asm_submitter: The University of Sydney

infraspecific_name: strain=SGH 0920

organism_name: Acinetobacter baumannii


asm_submitter: Instituto de Investigaciones Farmaco Bioquimicas

organism_name: Clostridium boliviensis


organism_name: Pseudomonas sp. BEA3.1


infraspecific_name: strain=CGH 0809


infraspecific_name: strain=TTSH ACBA 74


infraspecific_name: strain=TTSH ACBA 58


infraspecific_name: strain=SGH 0002


infraspecific_name: strain=TTSH ACBA 8


infraspecific_name: strain=CGH 0903


infraspecific_name: strain=TTSH ACBA 6


infraspecific_name: strain=SGH 0601


infraspecific_name: strain=SGH 0415


infraspecific_name: strain=SGH 0407


infraspecific_name: strain=SGH 0207


infraspecific_name: strain=SGH 0203


infraspecific_name: strain=SGH 9601


infraspecific_name: strain=SGH 1111


infraspecific_name: strain=SGH 0120


infraspecific_name: strain=TTSH ACBA 69


infraspecific_name: strain=SGH 1112


infraspecific_name: strain=CGH 0705


infraspecific_name: strain=TTSH ACBA 68


infraspecific_name: strain=TTSH ACBA 88


infraspecific_name: strain=SGH 0125


infraspecific_name: strain=TTSH ACBA 82


infraspecific_name: strain=CGH 0603


infraspecific_name: strain=SGH 0121


infraspecific_name: strain=CGH 0702


infraspecific_name: strain=TTSH ACBA 19


asm_submitter: Universidad Antonio Narino

organism_name: Exiguobacterium artemiae


organism_name: Bacillus infantis


infraspecific_name: strain=CGH 0810


asm_submitter: Cardiff University


excluded_from_refseq: contaminated

organism_name: Escherichia coli


organism_name: Enterobacter hormaechei


asm_submitter: Institute of Microbiology

organism_name: Mesomycoplasma ovipneumoniae


asm_submitter: Hunan University of Arts and Science

infraspecific_name: strain=HUAS YS2

organism_name: Streptomyces solicathayae


asm_submitter: Ningbo University

infraspecific_name: strain=DSM 15914

organism_name: Pseudoalteromonas maricaloris


asm_submitter: Hebei Medical University

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Listeria monocytogenes


asm_submitter: The First People's Hospital Of Lianyungang

organism_name: Streptococcus parasuis


asm_submitter: Nanjing Forestry University

organism_name: Ligilactobacillus salivarius


asm_submitter: Emory University

infraspecific_name: strain=MG1655 - AZIC


infraspecific_name: strain=MG1655 - CHLB


infraspecific_name: strain=MG1655 - CHLC


infraspecific_name: strain=MG1655 - AZIB


infraspecific_name: strain=MG1655 - CHLA


infraspecific_name: strain=MG1655 - AZIA


organism_name: Vibrio sp. Y184


organism_name: Vibrio sp. Vb1554


organism_name: Vibrio sp. Vb0932


organism_name: Vibrio sp. 2132-1


organism_name: Vibrio sp. 2094


organism_name: Vibrio sp. 1978


organism_name: Vibrio sp. 1974


organism_name: Vibrio sp. 1874


organism_name: Vibrio sp. 1727


organism_name: Vibrio sp. 1865


organism_name: Vibrio sp. 1408


organism_name: Vibrio sp. 1288


organism_name: Vibrio sp. 1403


asm_submitter: Beijing YuGen Pharmaceutical Co., Ltd

organism_name: Bifidobacterium longum


asm_submitter: Madurai Kamaraj University

infraspecific_name: strain=K-12 substr. MG1655

organism_name: Escherichia coli str. K-12 substr. MG1655


asm_submitter: CENTRAL RESEARCH INSTITUTE OF FOOD AND FEED CONTROL

organism_name: Streptococcus thermophilus


asm_submitter: University Medical Center Groningen

organism_name: Faecalibacterium prausnitzii


asm_submitter: Cornell University

excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Gammaproteobacteria bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Roseovarius pacificus


organism_name: Cytophagales bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Paracoccaceae bacterium


excluded_from_refseq: derived from metagenome

organism_name: Roseobacter sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Ilumatobacteraceae bacterium


organism_name: Acidimicrobiales bacterium


organism_name: Reichenbachiella sp.


organism_name: Enterococcus faecium


asm_submitter: Faculty of Veterinary Science, Chulalongkorn University

organism_name: Ligilactobacillus salivarius


asm_submitter: Tel Aviv Sourasky Medical Center

organism_name: Escherichia coli


asm_submitter: Institute of Bioengineering, Research Center of Biotechnology of RAS


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


organism_name: Enterobacter cloacae complex sp. 2023EL-01177


asm_submitter: Yokohama City University

organism_name: Pseudomonas aeruginosa


organism_name: Rhodanobacter sp. KK11


asm_submitter: Federal university oye ekiti

infraspecific_name: strain=OYA S31


organism_name: Klebsiella michiganensis


asm_submitter: Yantai University

organism_name: Bacillus pacificus


organism_name: Citrobacter freundii


asm_submitter: National Center for Biotechnology Information

isolate: Klebsiella pneumoniae

organism_name: Klebsiella pneumoniae


asm_submitter: Public Health England

organism_name: Vibrio parahaemolyticus


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


asm_submitter: FDA/CFSAN

organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


asm_submitter: CSIR-IIIM

organism_name: Serratia marcescens


asm_submitter: CDC

organism_name: Escherichia coli


organism_name: Salmonella enterica


organism_name: Klebsiella ornithinolytica


excluded_from_refseq: out of scope for the RefSeq project


organism_name: Shigella flexneri


asm_submitter: US Food and Drug Administration


asm_submitter: China West Normal University

infraspecific_name: strain=XH

organism_name: Aeromonas sp. XH


asm_submitter: University of Waterloo

organism_name: Acidobacteriota bacterium


organism_name: Acinetobacter baumannii


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Brandenburg


infraspecific_name: strain=CD

organism_name: Aeromonas sp. CD


organism_name: Pseudomonas aeruginosa


organism_name: Klebsiella pneumoniae


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Escherichia coli


organism_name: Salmonella enterica


organism_name: Shigella sonnei


asm_submitter: Ramon y Cajal Hospital


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Oranienburg


organism_name: Vibrio vulnificus


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


asm_submitter: FDA Center for Food Safety and Applied Nutrition


asm_submitter: Sichuan Agricultural University

organism_name: Riemerella anatipestifer


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar London


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


asm_submitter: Centers for Disease Control and Prevention


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


asm_submitter: Southern University of Science and Technology


organism_name: Salmonella enterica subsp. enterica serovar Uganda


asm_submitter: Universiti Kebangsaan Malaysia

organism_name: Helicobacter pylori


organism_name: Salmonella enterica subsp. enterica serovar Brandenburg


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Campylobacter lari


organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: South Carolina Dept. of Health & Environmental Control

organism_name: Escherichia coli


asm_submitter: National Center for Biotechnology Information


asm_submitter: FDA


asm_submitter: University of Milan

organism_name: Serratia marcescens


organism_name: Shigella flexneri


asm_submitter: USDA FSIS

organism_name: Campylobacter jejuni


organism_name: Shigella sonnei


asm_submitter: USDA ARS

organism_name: Streptomyces sp. SJL17-1


organism_name: Streptomyces sp. SCL15-4


organism_name: Streptomyces sp. SCL15-6


organism_name: Streptomyces sp. MCL20-2


organism_name: Campylobacter coli


asm_submitter: CDC


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

isolate: whole organism

organism_name: Staphylococcus aureus


organism_name: Vibrio cholerae


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica


asm_submitter: Johannes Gutenberg-University Mainz

isolate: Strain C


organism_name: Yersinia enterocolitica


organism_name: Vibrio vulnificus


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


isolate: Strain B


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Cerro


isolate: Strain A


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Campylobacter jejuni


asm_submitter: Sunchon National University

organism_name: Dickeya fangzhongdai


organism_name: Campylobacter coli


asm_submitter: Chulalongkorn University

organism_name: Pseudomonas aeruginosa


asm_submitter: South China Agricultural University

organism_name: Enterobacter asburiae


organism_name: Enterobacter cloacae


asm_submitter: CINVESTAV

organism_name: Clavibacter michiganensis subsp. michiganensis


asm_submitter: Ramon y Cajal Hospital


organism_name: Salmonella enterica


asm_submitter: Vet-LIRN-CVM-FDA


asm_submitter: N.F.Gamaleya National Research Center for Epidemiology and Microbiology


organism_name: Acinetobacter baumannii


organism_name: Klebsiella pneumoniae


organism_name: Salmonella enterica subsp. enterica serovar Worthington


asm_submitter: Centers for Disease Control and Prevention


organism_name: Shigella flexneri


organism_name: Shigella sonnei


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: National Center for Biotechnology Information


excluded_from_refseq: unverified source organism; from large multi-isolate project


organism_name: Escherichia coli


organism_name: Yersinia enterocolitica


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Soerenga


organism_name: Campylobacter upsaliensis


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Clostridium perfringens


organism_name: Escherichia coli


organism_name: Shigella sonnei


organism_name: Listeria monocytogenes


organism_name: Pseudomonas sp. 2023EL-01195


asm_submitter: Beijing YuGen Pharmaceutical Co., Ltd

organism_name: Bifidobacterium longum


asm_submitter: Cornell University

organism_name: Bacteroidia bacterium


asm_submitter: The Hong Kong Polytechnic University

organism_name: Vibrio sp. Vb0667


organism_name: Vibrio sp. 1291-1


asm_submitter: Yangzhou University

organism_name: Enterococcus hirae


organism_name: Enterococcus faecium


asm_submitter: Agriculture and Agri-Food Canada

organism_name: Candidatus Phytoplasma pruni


asm_submitter: Helmholtz Center for Environmental Research - UFZ

excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

group: archaea

organism_name: Nitrososphaeraceae archaeon


asm_submitter: University of East Anglia

infraspecific_name: strain=COX

organism_name: Paraburkholderia terrae


excluded_from_refseq: genome length too large; not used as type

organism_name: Cupriavidus ulmosensis


asm_submitter: FDA/CFSAN


asm_submitter: Lawrence Berkeley National Laboratory

organism_name: Bacillus subtilis


organism_name: Pseudomonas aeruginosa


asm_submitter: Center for Food Safety and Applied Nutrition

organism_name: Salmonella enterica


organism_name: Legionella pneumophila


asm_submitter: CDC


organism_name: Shigella sonnei


organism_name: Shigella flexneri


organism_name: Escherichia coli


organism_name: Listeria monocytogenes


organism_name: Campylobacter jejuni


organism_name: Pseudomonas putida


organism_name: Campylobacter coli


organism_name: Campylobacter upsaliensis


organism_name: Enterococcus faecium


organism_name: Citrobacter freundii


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Lubbock


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Escherichia coli


asm_submitter: Vet-LIRN-CVM-FDA


asm_submitter: icddrb

organism_name: Salmonella enterica subsp. enterica serovar Typhi


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Shigella sonnei


organism_name: Yersinia enterocolitica


organism_name: Campylobacter coli


organism_name: Enterococcus faecium


organism_name: Bacillus subtilis


organism_name: Campylobacter lari


excluded_from_refseq: contaminated; out of scope for the RefSeq project


asm_submitter: UCSF

organism_name: Ligilactobacillus murinus


asm_submitter: National Center for Biotechnology Information


asm_submitter: Henan Agricultural University


organism_name: Escherichia coli O157


organism_name: Enterobacter cloacae


asm_submitter: Hunan University of Arts and Science

infraspecific_name: strain=CGMCC 4.1801

organism_name: Streptomyces violaceoruber


organism_name: Enterobacter kobei


organism_name: Enterobacter asburiae


organism_name: Citrobacter freundii


organism_name: Enterobacter bugandensis


organism_name: Escherichia coli


infraspecific_name: strain=Human


infraspecific_name: strain=Chicken


organism_name: Klebsiella pneumoniae


asm_submitter: microbial pathogenic ecology group

organism_name: Bacillus sp. N3378-2at


infraspecific_name: strain=Wild bird


organism_name: Campylobacter jejuni


infraspecific_name: strain=Pig


infraspecific_name: strain=Sheep


asm_submitter: University of Antwerp

organism_name: Streptococcus pneumoniae


organism_name: Campylobacter coli


organism_name: Campylobacter upsaliensis


infraspecific_name: strain=Cattle


organism_name: Shigella sonnei


organism_name: Shigella flexneri


organism_name: Salmonella enterica


organism_name: Enterococcus faecium


organism_name: Vibrio parahaemolyticus


infraspecific_name: strain=clinical isolate of L. monocytogenes

organism_name: Listeria monocytogenes


asm_submitter: N.F.Gamaleya National Research Center for Epidemiology and Microbiology


asm_submitter: UCIBIO@requimte, Faculty of Pharmacy, University of Porto

organism_name: Kluyvera cryocrescens


organism_name: Campylobacter lari


organism_name: Campylobacter fetus


asm_submitter: Washington University in St. Louis

organism_name: Staphylococcus saprophyticus


asm_submitter: University of Sao Paulo

organism_name: Micromonospora sp. BRA006-A


asm_submitter: Peking University First Hospital

organism_name: Klebsiella pneumoniae


organism_name: Klebsiella quasipneumoniae


asm_submitter: Xiamen University

organism_name: Roseobacter sp. FCG-D35


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


organism_name: Atlantibacter hermannii


organism_name: Escherichia coli


organism_name: Defluviimonas sp. D31


organism_name: Klebsiella planticola


asm_submitter: Chulalongkorn University

organism_name: Bacillus cereus


asm_submitter: Third Institute of Oceanography, Ministry of Natural Resources

infraspecific_name: strain=JCM 30492

organism_name: Microbacterium arthrosphaerae


asm_submitter: KU Leuven

organism_name: Priestia megaterium


organism_name: Bacillus subtilis subsp. subtilis


asm_submitter: Hellenic Centre for Marine Research

infraspecific_name: strain=AG 2.13.5

organism_name: Aeromonas rivipollensis


asm_submitter: Korea Institute of Ocean Science & Technology

organism_name: Rossellomorea marisflavi


asm_submitter: The University of Adelaide

organism_name: Streptococcus pneumoniae


asm_submitter: Instituto de Pesquisa Pele Pequeno Principe

organism_name: Stenotrophomonas maltophilia


organism_name: Staphylococcus saprophyticus


asm_submitter: The Hong Kong Polytechnic University

organism_name: Vibrio sp. Y176


organism_name: Vibrio sp. Vb2899


organism_name: Vibrio sp. Vb2978


asm_submitter: Mississippi State University-College of Veterinary Medicine

organism_name: Mannheimia haemolytica


asm_submitter: Henan Agricultural University


asm_submitter: Henan Academy of Agricultural Sciences

organism_name: Paenibacillus polymyxa


asm_submitter: Bahir Dar University

excluded_from_refseq: contaminated; from large multi-isolate project; genome length too large

organism_name: Mycobacterium tuberculosis


asm_submitter: Kyungpook National University School of Medicine

organism_name: Acinetobacter sp. 16


asm_submitter: Zhejiang Provincial People's Hospital (Affiliated People's Hospital, Hangzhou Medical College)

organism_name: Proteus mirabilis


asm_submitter: Ramon y Cajal Hospital

organism_name: Escherichia coli


asm_submitter: Universidad de Buenos Aires

organism_name: Staphylococcus aureus


asm_submitter: National Center for Biotechnology Information

organism_name: Enterococcus faecium


asm_submitter: Univerisity of South Florida

organism_name: Shewanella fidelis


asm_submitter: University of Texas MD Anderson Cancer Center


organism_name: Escherichia coli O25b:H4-ST131


asm_submitter: Universiteit Gent

organism_name: Vibrio parahaemolyticus


asm_submitter: Rutgers University-Camden

organism_name: Pseudomonas sp. SED1


asm_submitter: National Institute of Health


asm_submitter: Kasetsart University

organism_name: Amycolatopsis solani


asm_submitter: The University of Tulsa

organism_name: Campylobacter jejuni


asm_submitter: zhejiang university

organism_name: Flagellimonas baculiformis


organism_name: Flagellimonas crocea


asm_submitter: Oregon State University

organism_name: Xanthomonas hortorum pv. pelargonii


asm_submitter: Washington University in St. Louis

organism_name: Staphylococcus saprophyticus


organism_name: Xanthomonas dyei


asm_submitter: Netaji Subhas University of Technology

organism_name: Streptomyces californicus


infraspecific_name: strain=ADMS

organism_name: Streptomyces sp. ADMS


asm_submitter: FDA

organism_name: Salmonella enterica


asm_submitter: CDC


asm_submitter: University of Pennsylvania


organism_name: Escherichia coli


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Vibrio cholerae


organism_name: Enterococcus faecalis


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: Centers for Disease Control and Prevention


asm_submitter: Center for Food Safety and Applied Nutrition


asm_submitter: FDA/CFSAN


asm_submitter: National Center for Biotechnology Information

organism_name: Enterococcus faecium


organism_name: Klebsiella oxytoca


organism_name: Klebsiella pneumoniae


organism_name: Cronobacter sakazakii


organism_name: Vibrio fluvialis


organism_name: Vibrio parahaemolyticus


organism_name: Cronobacter turicensis


organism_name: Staphylococcus aureus


organism_name: Citrobacter freundii


organism_name: Morganella morganii


asm_submitter: Sustech Hospital

organism_name: Streptococcus suis


asm_submitter: The University of Sydney

infraspecific_name: strain=CSSGH 0002

organism_name: Acinetobacter baumannii


infraspecific_name: strain=TTSH ACBA 97


asm_submitter: Jiangsu Normal University

organism_name: Plantactinospora sp. KLBMP9567


asm_submitter: Southern Oregon University

organism_name: Alteromonas macleodii


infraspecific_name: strain=TTSH ACBA 78


infraspecific_name: strain=TTSH ACBA 31


infraspecific_name: strain=TTSH ACBA 76


infraspecific_name: strain=TTSH ACBA 30


infraspecific_name: strain=TTSH ACBA 54


infraspecific_name: strain=TTSH ACBA 52


infraspecific_name: strain=SGH 0902


infraspecific_name: strain=SGH 0417


infraspecific_name: strain=TTSH ACBA 45


infraspecific_name: strain=SGH 0623


infraspecific_name: strain=TTSH ACBA 60


infraspecific_name: strain=SGH 0622


infraspecific_name: strain=TTSH ACBA 43


infraspecific_name: strain=TTSH ACBA 38


infraspecific_name: strain=SGH 0320


infraspecific_name: strain=TTSH ACBA 66


infraspecific_name: strain=CGH 0701


infraspecific_name: strain=SGH 0321


infraspecific_name: strain=CSSGH 0213


infraspecific_name: strain=SGH 0013


infraspecific_name: strain=SGH 0014


infraspecific_name: strain=SGH 0119


asm_submitter: West China Hospital, Sichuan University


asm_submitter: Ulsan National Institute of Science and Technology

organism_name: Iodobacter sp. CM08


asm_submitter: Pavol Jozef Safarik University in Kosice, Faculty of Science

organism_name: Halomonas sp. HP20-15


asm_submitter: ANSES


organism_name: Polaromonas potterensis


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


organism_name: Escherichia coli


infraspecific_name: strain=SGH 0616


infraspecific_name: strain=SGH 0703


infraspecific_name: strain=SGH 0704


infraspecific_name: strain=TTSH ACBA 100


infraspecific_name: strain=TTSH ACBA 47


infraspecific_name: strain=SGH 0802


infraspecific_name: strain=TTSH ACBA 95


infraspecific_name: strain=CGH 0803


asm_submitter: California Academy of Sciences

organism_name: Photobacterium leiognathi subsp. mandapamensis


infraspecific_name: strain=SGH 0811


infraspecific_name: strain=SGH 0705


asm_submitter: Universidad de Salamanca

organism_name: Sedimentibacter sp.


organism_name: Edaphobacter sp.


organism_name: Formosa sejongensis


organism_name: Rhizobium sp. PL01


asm_submitter: Chung-Ang university

organism_name: Staphylococcus equorum


asm_submitter: Agharkar Research Institute

infraspecific_name: strain=MCC 0212

organism_name: Limosilactobacillus reuteri


organism_name: Klebsiella michiganensis


organism_name: Enterobacter ludwigii


asm_submitter: National university of Singapore

organism_name: Serratia proteamaculans


infraspecific_name: strain=MCC 0258

organism_name: Lacticaseibacillus paracasei


excluded_from_refseq: unverified source organism; annotation fails completeness check

organism_name: Pseudomonas lundensis


asm_submitter: Weifang People's Hospital

organism_name: Klebsiella pneumoniae


excluded_from_refseq: genome length too large


asm_submitter: CDC

excluded_from_refseq: from large multi-isolate project

organism_name: Vibrio alginolyticus


organism_name: Vibrio cholerae


organism_name: Vibrio parahaemolyticus


organism_name: Salmonella enterica


organism_name: Escherichia coli


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


asm_submitter: National Center for Biotechnology Information

organism_name: Legionella pneumophila


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: National Institute of Agricultural Science


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Bredeney


organism_name: Salmonella enterica subsp. enterica serovar Waedenswil


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


asm_submitter: KYUNGPOOK NATIONAL UNIVERSITY

organism_name: Bacillus sp. T3


asm_submitter: Inner Mongolia Medical University

organism_name: Priestia megaterium


asm_submitter: BOWEN UNIVERSITY

organism_name: Klebsiella pneumoniae subsp. pneumoniae


organism_name: Shigella flexneri


organism_name: Enterococcus faecium


organism_name: Aeromonas hydrophila


organism_name: Vibrio cholerae


organism_name: Salmonella enterica


organism_name: Acinetobacter baumannii


organism_name: Staphylococcus aureus


organism_name: Shigella sonnei


organism_name: Enterococcus faecalis


asm_submitter: Nanjing Agricultural University

excluded_from_refseq: partial

genome_rep: Partial

organism_name: Bacillus subtilis


organism_name: Vibrio parahaemolyticus


asm_submitter: Guizhou University

infraspecific_name: strain=GUCC 3

organism_name: Bacillus cereus


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: Swedish University of Agricultural Sciences

organism_name: Bifidobacterium longum subsp. longum


organism_name: Enterococcus faecium


organism_name: Salmonella enterica


organism_name: Klebsiella pneumoniae


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Give


asm_submitter: Center for Food Safety and Applied Nutrition

organism_name: Salmonella enterica subsp. enterica serovar Kentucky


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


organism_name: Listeria monocytogenes


organism_name: Campylobacter upsaliensis


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Escherichia coli


organism_name: Enterococcus faecalis


infraspecific_name: strain=Human


infraspecific_name: strain=Chicken


infraspecific_name: strain=Cattle

organism_name: Campylobacter fetus


infraspecific_name: strain=Sheep


infraspecific_name: strain=Poultry


asm_submitter: California Academy of Sciences

organism_name: Photobacterium leiognathi subsp. mandapamensis


asm_submitter: National university of Singapore

organism_name: Carnobacterium maltaromaticum


infraspecific_name: strain=Pig


asm_submitter: CDC

organism_name: Salmonella enterica


asm_submitter: Sunchon National University

organism_name: Dickeya fangzhongdai


asm_submitter: National Center for Biotechnology Information

organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


infraspecific_name: strain=Gull


asm_submitter: RESPOND-AbOne


asm_submitter: Thai Nguyen University of Agriculture and Forestry

organism_name: Azospirillum sp. NL1


asm_submitter: The University of New South Wales

organism_name: Candidatus Zeuxoniibacter abyssi


organism_name: Candidatus Nitrosoabyssus spongiisocia


organism_name: Campylobacter lari


infraspecific_name: strain=sheep


asm_submitter: Sanming University

infraspecific_name: strain=DSM 18860

organism_name: Methanoculleus receptaculi


infraspecific_name: strain=cattle


infraspecific_name: strain=chicken


asm_submitter: Zhangjiagang Traditional Chinese Medicine Hospital

organism_name: Klebsiella pneumoniae


infraspecific_name: strain=human


asm_submitter: University of Canterbury

organism_name: Shewanella baltica


asm_submitter: Yonsei University College of Medicine

organism_name: Klebsiella variicola


asm_submitter: Universidad de Antioquia

organism_name: Streptococcus mutans


asm_submitter: Jeju National University

organism_name: Methanosarcina sp.


organism_name: Methanomassiliicoccus sp.


asm_submitter: Yunnan Institute of Microbiology

infraspecific_name: strain=YIM B06819

organism_name: Sporosarcina sp. YIM B06819


infraspecific_name: strain=JCM 34409

organism_name: Sporosarcina beigongshangi


asm_submitter: Toho University

organism_name: Staphylococcus aureus


asm_submitter: Thapar Institute of Engineering & Technology

organism_name: Bacillus paranthracis


asm_submitter: Zhejiang Provincial People's Hospital (Affiliated People's Hospital, Hangzhou Medical College)

organism_name: Proteus mirabilis


organism_name: Proteus terrae


asm_submitter: Zhejiang university

organism_name: Enterobacter roggenkampii


organism_name: Enterobacter asburiae


organism_name: Enterobacter cloacae


organism_name: Enterobacter hormaechei


organism_name: Enterobacter kobei


organism_name: Klebsiella pneumoniae


asm_submitter: Ewha Womans University Mokdong Hospital


asm_submitter: peking university people's hospital


asm_submitter: Jiangnan University

organism_name: Bifidobacterium breve


asm_submitter: Universidade Federal do Rio de Janeiro

organism_name: Paenibacillus polymyxa


organism_name: Bacillus thuringiensis


asm_submitter: Wageningen University

organism_name: Mitsuokella jalaludinii


asm_submitter: the first people's hospital of Yongkang

organism_name: Escherichia coli


asm_submitter: Public Health England

organism_name: Vibrio cholerae


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Thompson


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Campylobacter jejuni


asm_submitter: CDC

organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Shigella sonnei


organism_name: Salmonella enterica


organism_name: Escherichia coli


asm_submitter: US Food and Drug Administration


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter upsaliensis


asm_submitter: National Center for Biotechnology Information

organism_name: Yersinia enterocolitica


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Campylobacter coli


organism_name: Staphylococcus aureus


asm_submitter: FDA Center for Food Safety and Applied Nutrition


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Pseudomonas aeruginosa


organism_name: Pluralibacter gergoviae


asm_submitter: Center for Food Safety and Applied Nutrition

infraspecific_name: strain=26 N

organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Campylobacter jejuni


asm_submitter: South Carolina Dept. of Health & Environmental Control

organism_name: Salmonella enterica subsp. enterica serovar Braenderup


excluded_from_refseq: contaminated; from large multi-isolate project


organism_name: Salmonella enterica subsp. enterica serovar Thompson


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar London


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Muenster


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Bredeney


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Shigella flexneri


organism_name: Pseudomonas aeruginosa


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Reading


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


asm_submitter: FDA/CFSAN

organism_name: Escherichia coli O157


organism_name: Staphylococcus aureus


organism_name: Shigella sonnei


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Staphylococcus pseudintermedius


organism_name: Salmonella enterica subsp. enterica serovar Idikan


organism_name: Salmonella enterica


infraspecific_name: strain=Microbial

organism_name: Escherichia coli


organism_name: Enterobacter ludwigii


organism_name: Enterobacter kobei


organism_name: Enterobacter cloacae


asm_submitter: peking university people's hospital


asm_submitter: Chung-Ang university

excluded_from_refseq: many frameshifted proteins

organism_name: Enterococcus lactis


organism_name: Enterobacter chengduensis


organism_name: Enterobacter bugandensis


organism_name: Pseudomonas aeruginosa


organism_name: Yersinia enterocolitica


organism_name: Campylobacter jejuni


infraspecific_name: strain=S. aureus

isolate: Patient with cardiac device-related endocarditis


isolate: female patient


isolate: 6 year old Male


isolate: 14 year old Male


isolate: Female


organism_name: Campylobacter coli


organism_name: Shigella flexneri


organism_name: Staphylococcus aureus


annotation_name: Annotation submitted by University of Illinois Urbana-Champaign

annotation_provider: University of Illinois Urbana-Champaign

asm_submitter: University of Illinois Urbana-Champaign

organism_name: [Clostridium] scindens


asm_submitter: Cape Town Antimicrobial Stewardship Study Alliance

organism_name: Klebsiella pneumoniae


asm_submitter: The University of Sydney

organism_name: Acinetobacter baumannii


asm_submitter: Sir Run Run Shaw Hospital, School of Medicine, Zhejiang University


asm_submitter: Institute of Medicinal Biotechnology

infraspecific_name: strain=KCTC 39840

organism_name: Conexibacter stalactiti


asm_submitter: Nanjing Agriculteral University

organism_name: Mycolicibacterium sp. D5.8-2


asm_submitter: University of Texas MD Anderson Cancer Center

organism_name: Escherichia coli


asm_submitter: institute of microbiology, Chinese academy of science

organism_name: Mesorhizobium sp. BAC0120


organism_name: Streptomyces sp. FXJ1.4098


asm_submitter: National Institute for Interdisciplinary Science and Technology (CSIR)

organism_name: Vibrio mangrovi


organism_name: Vibrio rhizosphaerae


organism_name: Vibrio plantisponsor


asm_submitter: National Institute for Biotechnology and Genetic Engineering, Faisalabad.

organism_name: Bacillus paralicheniformis


asm_submitter: Institute of Microbiology

infraspecific_name: strain=TB

organism_name: Metamycoplasma subdolum


asm_submitter: Research & Development Center, bereum Co. Ltd., Wonju, Republic of Korea

organism_name: Lactiplantibacillus plantarum


organism_name: Metamycoplasma equirhinis


asm_submitter: University of Massachusettes-Amherst

organism_name: Paenibacillus sp. RC80


asm_submitter: Jinhua Central Hospital

organism_name: Escherichia fergusonii


organism_name: Mycoplasmopsis verecunda


asm_submitter: National Institute of Agricultural Sciences, Rural Development Administration

organism_name: Xylophilus sp. GOD-11R


asm_submitter: Faculty of Science, Masaryk University

organism_name: Pseudomonas putida


asm_submitter: China Agricultural University

organism_name: Bacillus velezensis


asm_submitter: Hoseo University

organism_name: Archangium violaceum


asm_submitter: Shandong Agricultural University


asm_submitter: Qilu University of Technology

organism_name: Flavobacterium ardleyense


asm_submitter: Institute of Microbiology, CAS

organism_name: Sediminicoccus rosea


asm_submitter: nanjing university

organism_name: Streptomyces malaysiensis


asm_submitter: Sir Run Run Shaw Hospital, School of Medicine, Zhejiang University

organism_name: Pseudomonas aeruginosa


asm_submitter: Honam National Institute of Biological Resources

organism_name: Pseudomonas benzenivorans


asm_submitter: KAUST

organism_name: Klebsiella pneumoniae


asm_submitter: University of Texas MD Anderson Cancer Center

organism_name: Escherichia coli


asm_submitter: Guangdong Women and Children Hospital

organism_name: Corynebacterium sp. SFY-M4


asm_submitter: Nanyang Technological University


asm_submitter: Guangxi University

organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: University of Florida

organism_name: Xanthomonas euvesicatoria


asm_submitter: Institute for Cellular and Intracellular Symbiosis UB RAS


asm_submitter: Third Institute of Oceanography(TIO) of the Ministry of Natural Resources

organism_name: Microbacterium sp. M3


asm_submitter: Korea Research Institute of Bioscience and Biotechnology

excluded_from_refseq: genus undefined

infraspecific_name: strain=SG7u. 132

organism_name: Flammeovirgaceae bacterium SG7u.132


asm_submitter: Ningbo University

organism_name: Pseudoalteromonas peptidolytica


asm_submitter: University of Montana

organism_name: Nitrosomonadaceae bacterium


organism_name: Candidatus Nitrotoga sp.


organism_name: Nitrosarchaeum sp.


organism_name: Nitrospiraceae bacterium


asm_submitter: Research Center of Biotechnology RAS

organism_name: Desulfuromonadales bacterium


organism_name: Bacillota bacterium


organism_name: bacterium


organism_name: Methanosarcinales archaeon


organism_name: Methanolobus sp.


organism_name: Candidatus Brevefilum sp.


organism_name: Candidatus Methanoperedens sp.


organism_name: Halomonas sp.


organism_name: Acidobacteriota bacterium


organism_name: Desulfobulbaceae bacterium


asm_submitter: School of Pharmaceutical Sciences of Ribeirao Preto - University of Sao Paulo

organism_name: Serratia marcescens


organism_name: Escherichia coli


asm_submitter: Blokhina Scientific Research Institute of Epidemiology and Microbiology of Nizhny Novgorod

organism_name: Klebsiella pneumoniae


excluded_from_refseq: annotation fails completeness check


excluded_from_refseq: contaminated


asm_submitter: I2BC CNRS

organism_name: Azospirillum brasilense


asm_submitter: NNIIEM name acad.I.N. Blokhina

infraspecific_name: strain=NNAb 2483

organism_name: Acinetobacter baumannii


infraspecific_name: strain=NNAb 2484


excluded_from_refseq: unverified source organism; fragmented assembly

infraspecific_name: strain=NNSm 2482

organism_name: Stenotrophomonas maltophilia


asm_submitter: University of Guelph

organism_name: Bifidobacterium longum


organism_name: Parabacteroides distasonis


organism_name: Bacteroides ovatus


asm_submitter: West China Hospital, Sichuan University


asm_submitter: The University of Adelaide

organism_name: Streptococcus pneumoniae


asm_submitter: Zhejiang university

organism_name: Enterobacter asburiae


organism_name: Enterobacter hormaechei


asm_submitter: QUEENS UNIVERSITY BELFAST

organism_name: Haloferax volcanii


asm_submitter: Centre of Biotechnology of Sfax

organism_name: Peribacillus simplex


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Providencia sp. 2023EL-00965


asm_submitter: CDC

organism_name: Shigella flexneri


asm_submitter: FDA


asm_submitter: National Center for Biotechnology Information

organism_name: Proteus mirabilis


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Klebsiella pneumoniae


asm_submitter: Piotr Lukasik

excluded_from_refseq: derived from metagenome

organism_name: Candidatus Karelsulcia muelleri


asm_submitter: Korea University

organism_name: Rhodoferax ferrireducens


organism_name: Klebsiella oxytoca


asm_submitter: Public Health England

organism_name: Vibrio cholerae


asm_submitter: Makerere university/Quadram institute

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins; missing tRNA genes

organism_name: Aeromonas hydrophila


asm_submitter: Research Center of Biotechnology RAS

excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Deferrisomatales bacterium


asm_submitter: University of Montana

organism_name: Nitrospiraceae bacterium


organism_name: Nitrosomonadaceae bacterium


organism_name: Candidatus Nitrotoga sp.


asm_submitter: National Center for Microbiology - Institute of Health Carlos III

organism_name: Morganella morganii


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Staphylococcus pseudintermedius


organism_name: Enterobacter hormaechei


organism_name: Enterobacter cloacae


organism_name: Enterobacter asburiae


asm_submitter: Food microbiology laboratory

organism_name: Pediococcus inopinatus


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Staphylococcus aureus


asm_submitter: Hospital Universitario Marques de Valdecilla

organism_name: Streptococcus canis


organism_name: Proteus mirabilis


organism_name: Shigella sonnei


asm_submitter: University of Bern

organism_name: Brachyspira hyodysenteriae


organism_name: Shigella flexneri


asm_submitter: Yonsei University College of Medicine

organism_name: Paracoccus aminovorans


asm_submitter: PJ0150512022 by Rural Development Administration

organism_name: Pseudomonas moraviensis


asm_submitter: Yangzhou University

organism_name: Acinetobacter towneri


organism_name: Acinetobacter sp. YWS30-1


organism_name: Klebsiella oxytoca


organism_name: Klebsiella pneumoniae


asm_submitter: California Institute of Technology

organism_name: Mycoplasmatota bacterium


asm_submitter: korea institute of science and technology

organism_name: Clostridium sp. JS66


organism_name: Serratia marcescens


asm_submitter: Shandong Provincial Hospital


asm_submitter: Poultry Health Services

organism_name: Globicatella sp. PHS-GS-PNBC-21-1553


asm_submitter: National Center for Biotechnology Information


excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Riemerella anatipestifer


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


asm_submitter: FDA

organism_name: Escherichia coli


infraspecific_name: strain=Human


asm_submitter: National Institute for Interdisciplinary Science and Technology (CSIR)

organism_name: Vibrio porteresiae DSM 19223


asm_submitter: Universitas Pelita Harapan

organism_name: Bifidobacterium breve


asm_submitter: Inner Mongolia Medical University

organism_name: Bacillus halotolerans


asm_submitter: CDC

organism_name: Salmonella enterica


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Pseudomonas aeruginosa


organism_name: Campylobacter lari


organism_name: Citrobacter freundii


organism_name: Klebsiella ornithinolytica


asm_submitter: South Carolina Dept. of Health & Environmental Control


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Shigella sonnei


organism_name: Campylobacter jejuni


asm_submitter: North Carolina State University

organism_name: Lactobacillus acidophilus


organism_name: Staphylococcus aureus


organism_name: Limosilactobacillus reuteri


asm_submitter: Monash University

organism_name: Enterococcus faecium


asm_submitter: Zhejiang Provincial People's Hospital (Affiliated People's Hospital, Hangzhou Medical College)

organism_name: Proteus terrae


organism_name: Campylobacter coli


organism_name: Escherichia coli


organism_name: Salmonella enterica


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Staphylococcus pseudintermedius


asm_submitter: Guangdong Ocean University

infraspecific_name: strain=LC

organism_name: Vibrio parahaemolyticus


asm_submitter: Medical Faculty, Otto-von-Guericke University Magdeburg

infraspecific_name: strain=DSM 115960

organism_name: Arcobacter cryaerophilus gv. pseudocryaerophilus


infraspecific_name: strain=DSM 115954


infraspecific_name: strain=DSM 115955


infraspecific_name: strain=DSM 115956


asm_submitter: Universiti Teknologi Malaysia

organism_name: Verrucomicrobiia bacterium


organism_name: Myxococcales bacterium


organism_name: Bryobacterales bacterium


organism_name: Candidatus Caldarchaeum sp.


organism_name: Proteus mirabilis


organism_name: Acinetobacter baumannii


organism_name: Geminicoccaceae bacterium


organism_name: Cyclobacteriaceae bacterium


organism_name: Thermus sp.


organism_name: Bacteroidia bacterium


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Rhodovarius sp.


organism_name: Anaerolineales bacterium


organism_name: Escherichia coli


organism_name: Anaerolineae bacterium


organism_name: Staphylococcus aureus


organism_name: Candidatus Bipolaricaulota bacterium


organism_name: Aquificaceae bacterium


excluded_from_refseq: unverified source organism; derived from metagenome; genus undefined

organism_name: Burkholderiales bacterium


organism_name: Leptospiraceae bacterium


organism_name: Abditibacteriales bacterium


organism_name: Thermoleophilia bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined


organism_name: Shigella flexneri


organism_name: Pseudomonas aeruginosa


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Armatimonadota bacterium


organism_name: Bacteroidota bacterium


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Verrucomicrobiales bacterium


organism_name: Bacteroidia bacterium


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: bacterium


organism_name: Tepidimonas sp.


organism_name: Burkholderiales bacterium


organism_name: Salmonella enterica subsp. enterica serovar Infantis


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Raineya sp.


organism_name: Anaerolineae bacterium


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Acidobacteriota bacterium


organism_name: Campylobacter jejuni


organism_name: Candidatus Nitrosocaldus sp.


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Flammeovirgaceae bacterium


organism_name: Chloroflexota bacterium


organism_name: Myxococcales bacterium


organism_name: Sandaracinaceae bacterium


organism_name: Bacteroidota bacterium


organism_name: Anaerolineales bacterium


organism_name: Cytophagales bacterium


organism_name: Gemmatales bacterium


organism_name: Chitinophagales bacterium


organism_name: Thermogemmata sp.


organism_name: Aquificaceae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Bacteroidia bacterium


organism_name: Roseiflexaceae bacterium


organism_name: Pseudobdellovibrionaceae bacterium


organism_name: Phycisphaerales bacterium


organism_name: Gemmataceae bacterium


organism_name: Chloroherpetonaceae bacterium


organism_name: Saprospiraceae bacterium


organism_name: Anaerolineae bacterium


organism_name: Candidatus Bipolaricaulota bacterium


organism_name: Acidobacteriota bacterium


infraspecific_name: strain=DSM 115972

organism_name: Arcobacter cryaerophilus gv. pseudocryaerophilus


organism_name: Nitrososphaerota archaeon


organism_name: Candidatus Aenigmatarchaeota archaeon


organism_name: Caldimicrobium sp.


organism_name: Armatimonadota bacterium


organism_name: Candidatus Calescibacterium sp.


organism_name: Pseudothermotoga sp.


organism_name: Elusimicrobiota bacterium


organism_name: Candidatus Omnitrophota bacterium


organism_name: Escherichia coli


organism_name: Dictyoglomus sp.


organism_name: Salmonella enterica


organism_name: Synergistota bacterium


organism_name: Desulfurococcaceae archaeon


organism_name: Anaerolineales bacterium


organism_name: Shigella flexneri


organism_name: Caldifarciminota bacterium


organism_name: Candidatus Bipolaricaulota bacterium


organism_name: Gloeomargarita sp. SKYBB_i_bin120


organism_name: Archaeoglobaceae archaeon


organism_name: Anaerolineae bacterium


organism_name: Spirochaetia bacterium


organism_name: Geminicoccaceae bacterium


organism_name: Shigella sonnei


organism_name: Bacteroidota bacterium


organism_name: Chloroflexota bacterium


organism_name: Thermodesulfobacterium sp.


organism_name: Candidatus Kryptonium sp.


organism_name: Bryobacterales bacterium


organism_name: Salmonella enterica


organism_name: Geminocystis sp.


organism_name: Armatimonadota bacterium


organism_name: Bacteroidia bacterium


organism_name: Caldifarciminota bacterium


organism_name: Escherichia coli


organism_name: Meiothermus sp.


organism_name: Candidatus Caldarchaeum sp.


organism_name: Caldimicrobium sp.


organism_name: Candidatus Calescibacterium sp.


organism_name: Aquificaceae bacterium


organism_name: Sulfolobales archaeon


organism_name: Ignisphaera sp.


organism_name: Nitrososphaerota archaeon


organism_name: Bacteroidota bacterium


organism_name: Anaerolineae bacterium


organism_name: Thermoguttaceae bacterium


organism_name: Elusimicrobiota bacterium


organism_name: Thermomicrobium sp.


organism_name: Candidatus Bipolaricaulota bacterium


organism_name: Bacteroidia bacterium


organism_name: Thermofilaceae archaeon


organism_name: Chloroflexota bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Thermus sp.


organism_name: Gemmatales bacterium


organism_name: Chloroherpetonaceae bacterium


organism_name: Armatimonadota bacterium


organism_name: Sulfolobales archaeon


asm_submitter: University of Neuchatel

organism_name: Thermaerobacter composti


organism_name: Candidatus Nitrosocaldus sp.


organism_name: Archaeoglobaceae archaeon


organism_name: Candidatus Korarchaeum sp.


organism_name: Thermodesulfovibrio sp.


organism_name: Escherichia coli


organism_name: Nitrososphaerota archaeon


organism_name: Leptospiraceae bacterium


organism_name: Candidatus Caldarchaeum sp.


organism_name: Thermoanaerobaculum sp.


organism_name: Thermomicrobium sp.


organism_name: Caldifarciminota bacterium


organism_name: Salmonella enterica


organism_name: Burkholderiales bacterium


organism_name: Verrucomicrobiales bacterium


organism_name: Lysobacterales bacterium


organism_name: Chloroherpetonaceae bacterium


organism_name: Acidobacteriota bacterium


organism_name: Shigella sonnei


organism_name: Acetobacteraceae bacterium


organism_name: Meiothermus sp.


organism_name: Geminocystis sp.


organism_name: Verrucomicrobiota bacterium


organism_name: Escherichia coli


organism_name: Cytophagales bacterium


organism_name: Caldilineaceae bacterium


organism_name: Cytophagaceae bacterium


organism_name: Anaerolineae bacterium


organism_name: Anaerolineales bacterium


organism_name: Salmonella enterica


organism_name: Saprospiraceae bacterium


organism_name: Aquificaceae bacterium


organism_name: Sutterellaceae bacterium


organism_name: Gemmatales bacterium


organism_name: Flavobacteriales bacterium


organism_name: Chitinophagales bacterium


organism_name: Candidatus Caldarchaeum sp.


organism_name: Flammeovirgaceae bacterium


organism_name: Bryobacterales bacterium


organism_name: Shigella flexneri


organism_name: Ignavibacteriales bacterium


organism_name: Escherichia coli


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Arcobacter sp.


organism_name: Gloeomargarita sp. SKYGB_i_bin116


organism_name: Thermaurantiacus sp.


organism_name: Verrucomicrobiota bacterium


organism_name: Anaerolineae bacterium


organism_name: Bacteroidia bacterium


organism_name: Chloroherpetonaceae bacterium


organism_name: Aquificaceae bacterium


organism_name: Planctomycetota bacterium


organism_name: Acetobacteraceae bacterium


organism_name: Meiothermus sp.


organism_name: Chitinophagales bacterium


organism_name: Acidobacteriota bacterium


organism_name: Oscillochloridaceae bacterium


organism_name: Chloroflexus sp.


asm_submitter: Agriculture and Agri-food Canada

organism_name: Streptomyces scabiei


excluded_from_refseq: from large multi-isolate project

organism_name: Salmonella enterica


asm_submitter: University of Antwerp

organism_name: Candidatus Electrothrix scaldis


organism_name: Shigella flexneri


organism_name: Escherichia coli


organism_name: Pseudomonas aeruginosa


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Adelaide


asm_submitter: National Center for Biotechnology Information


organism_name: Klebsiella pneumoniae


organism_name: Proteus mirabilis


organism_name: Acinetobacter baumannii


asm_submitter: Center for Food Safety and Applied Nutrition


asm_submitter: CDC


organism_name: Salmonella enterica subsp. enterica serovar Idikan


organism_name: Campylobacter jejuni


excluded_from_refseq: unverified source organism; from large multi-isolate project


organism_name: Citrobacter braakii


organism_name: Enterococcus faecalis


asm_submitter: Centers for Disease Control and Prevention


asm_submitter: FDA/CFSAN

organism_name: Listeria monocytogenes


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


organism_name: Salmonella enterica subsp. enterica serovar Brandenburg


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Escherichia coli


organism_name: Pseudomonas aeruginosa


organism_name: Campylobacter coli


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Legionella pneumophila


organism_name: Vibrio parahaemolyticus


organism_name: Vibrio vulnificus


organism_name: Vibrio cholerae


organism_name: Salmonella enterica subsp. enterica serovar Alachua


organism_name: Salmonella enterica subsp. enterica serovar Brandenburg


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Escherichia coli


organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica


organism_name: Pseudomonas aeruginosa


organism_name: Listeria monocytogenes


asm_submitter: FDA Center for Food Safety and Applied Nutrition


organism_name: Salmonella enterica subsp. enterica serovar Anatum


asm_submitter: Chung-Ang university

organism_name: Staphylococcus halotolerans


organism_name: Staphylococcus sp. KG4-1


organism_name: Staphylococcus pseudoxylosus


organism_name: Staphylococcus xylosus


organism_name: Enterococcus lactis


asm_submitter: Contra Costa Public Health Laboratory submission group

organism_name: Salmonella enterica subsp. enterica serovar Newport


asm_submitter: Agricultural Research Council

organism_name: Bifidobacterium thermophilum


infraspecific_name: strain=NSL

organism_name: Lactobacillus acidophilus


asm_submitter: Guangdong Women and Children Hospital

organism_name: Corynebacterium sp. SFY-K9


organism_name: Staphylococcus shinii


asm_submitter: University of Mosul

organism_name: Proteus mirabilis


organism_name: Shigella sonnei


organism_name: Escherichia coli


organism_name: Staphylococcus nepalensis


organism_name: Campylobacter coli


asm_submitter: Universidad de Antioquia

organism_name: Streptococcus mutans


asm_submitter: UNIVERSIDAD NACIONAL JORGE BASADRE GROHOMANN

infraspecific_name: strain=CCM

organism_name: Priestia flexa


asm_submitter: ICMR-National Institute of Cholera and Enteric Diseases

infraspecific_name: strain=MDCL 101

organism_name: Enterobacter cloacae subsp. cloacae


organism_name: Campylobacter jejuni


asm_submitter: Paris Saclay University


asm_submitter: Federal university oye ekiti

infraspecific_name: strain=OYA S30

organism_name: Acinetobacter sp. OYA S30


organism_name: Shigella flexneri


organism_name: Salmonella enterica


organism_name: Listeria monocytogenes


asm_submitter: FDA


asm_submitter: National Center for Biotechnology Information


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


organism_name: Pseudomonas aeruginosa


asm_submitter: CDC


organism_name: Staphylococcus aureus


asm_submitter: Centers for Disease Control and Prevention


asm_submitter: Yunnan Agricultural University

organism_name: Agrobacterium fabrum


asm_submitter: USDA FSIS


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: National Institute of Agricultural Science

infraspecific_name: strain=JBAB

organism_name: Acinetobacter baumannii


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


asm_submitter: Anses

organism_name: Streptococcus suis


organism_name: Salmonella enterica subsp. enterica serovar Kiambu


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Escherichia coli


asm_submitter: Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology

organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


excluded_from_refseq: unverified source organism; annotation fails completeness check; from large multi-isolate project


organism_name: Campylobacter jejuni


infraspecific_name: strain=JBPA


organism_name: Campylobacter coli


organism_name: Salmonella enterica


organism_name: Shigella flexneri


organism_name: Shigella sonnei


asm_submitter: US Food and Drug Administration


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Bovismorbificans


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Legionella pneumophila


organism_name: Salmonella enterica


organism_name: Campylobacter jejuni


organism_name: Staphylococcus aureus


organism_name: Campylobacter coli


organism_name: Pseudomonas aeruginosa


organism_name: Klebsiella planticola


organism_name: Clostridioides difficile


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Aeromonas veronii


organism_name: Edwardsiella piscicida


organism_name: Photobacterium damselae


organism_name: Escherichia coli


organism_name: Flavobacterium psychrophilum


organism_name: Edwardsiella ictaluri


organism_name: Yersinia ruckeri


organism_name: Salmonella enterica


organism_name: Shigella boydii


asm_submitter: South Carolina Dept. of Health & Environmental Control

excluded_from_refseq: contaminated; from large multi-isolate project


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


organism_name: Campylobacter upsaliensis


organism_name: Salmonella enterica subsp. enterica serovar Thompson


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Pseudomonas aeruginosa


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Escherichia coli


organism_name: Vibrio fluvialis


organism_name: Vibrio vulnificus


organism_name: Vibrio cidicii


organism_name: Vibrio harveyi


asm_submitter: University College Cork

organism_name: Lactococcus lactis


organism_name: Vibrio cholerae


organism_name: Salmonella enterica subsp. enterica serovar Worthington


organism_name: Salmonella enterica subsp. enterica serovar Altona


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Muenster


organism_name: Salmonella enterica subsp. enterica serovar Panama


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Salmonella enterica


organism_name: Pseudomonas aeruginosa


organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


organism_name: Campylobacter lari


organism_name: Escherichia coli


infraspecific_name: strain=O1 El Tor

organism_name: Vibrio cholerae


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Reading


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Brancaster


organism_name: Clostridioides difficile


asm_submitter: South China Agricultural University

organism_name: Bacillus cereus


organism_name: Salmonella enterica


isolate: Clinical E. coli isolate: ec_00006


isolate: Clinical E. coli isolate: ec_00003


isolate: Clinical E. coli isolate: ec_00010


isolate: Clinical E. coli isolate: ec_00004


isolate: Clinical E. coli isolate: ec_00011


isolate: Clinical E. coli isolate: ec_00012


isolate: Clinical E. coli isolate: ec_00017


isolate: Clinical E. coli isolate: ec_00014


isolate: Clinical E. coli isolate: ec_00013


isolate: Clinical E. coli isolate: ec_00016


isolate: Clinical E. coli isolate: ec_00019


isolate: Clinical E. coli isolate: ec_00021


isolate: Clinical E. coli isolate: ec_00022


isolate: Clinical E. coli isolate: ec_00020


isolate: Clinical E. coli isolate: ec_00024


isolate: Clinical E. coli isolate: ec_00029


organism_name: Shigella flexneri


isolate: Clinical E. coli isolate: ec_00037


isolate: Clinical E. coli isolate: ec_00034


isolate: Clinical E. coli isolate: ec_00030


isolate: Clinical E. coli isolate: ec_00038


isolate: Clinical E. coli isolate: ec_00040


isolate: Clinical E. coli isolate: ec_00041


isolate: Clinical E. coli isolate: ec_00042


isolate: Clinical E. coli isolate: ec_00043


isolate: Clinical E. coli isolate: ec_00046


isolate: Clinical E. coli isolate: ec_00044


isolate: Clinical E. coli isolate: ec_00045


isolate: Clinical E. coli isolate: ec_00047


isolate: Clinical E. coli isolate: ec_00049


isolate: Clinical E. coli isolate: ec_00050


isolate: Clinical E. coli isolate: ec_00051


isolate: Clinical E. coli isolate: ec_00052


isolate: Clinical E. coli isolate: ec_00053


isolate: Clinical E. coli isolate: ec_00054


isolate: Clinical E. coli isolate: ec_00056


isolate: Clinical E. coli isolate: ec_00057


isolate: Clinical E. coli isolate: ec_00066


isolate: Clinical E. coli isolate: ec_00058


isolate: Clinical E. coli isolate: ec_00059


isolate: Clinical E. coli isolate: ec_00061


isolate: Clinical E. coli isolate: ec_00069


isolate: Clinical E. coli isolate: ec_00068


isolate: Clinical E. coli isolate: ec_00067


isolate: Clinical E. coli isolate: ec_00072


isolate: Clinical E. coli isolate: ec_00073


isolate: Clinical E. coli isolate: ec_00074


isolate: Clinical E. coli isolate: ec_00075


isolate: Clinical E. coli isolate: ec_00079


isolate: Clinical E. coli isolate: ec_00098


isolate: Clinical E. coli isolate: ec_00080


isolate: Clinical E. coli isolate: ec_00087


isolate: Clinical E. coli isolate: ec_00105


isolate: Clinical E. coli isolate: ec_00099


isolate: Clinical E. coli isolate: ec_00086


isolate: Clinical E. coli isolate: ec_00101


isolate: Clinical E. coli isolate: ec_00102


isolate: Clinical E. coli isolate: ec_00114


isolate: Clinical E. coli isolate: ec_00112


isolate: Clinical E. coli isolate: ec_00118


isolate: Clinical E. coli isolate: ec_00123


isolate: Clinical E. coli isolate: ec_00120


isolate: Clinical E. coli isolate: ec_00124


isolate: Clinical E. coli isolate: ec_00132


isolate: Clinical E. coli isolate: ec_00126


isolate: Clinical E. coli isolate: ec_00140


isolate: Clinical E. coli isolate: ec_00142


isolate: Clinical E. coli isolate: ec_00141


isolate: Clinical E. coli isolate: ec_00145


isolate: Clinical E. coli isolate: ec_00154


isolate: Clinical E. coli isolate: ec_00148


isolate: Clinical E. coli isolate: ec_00147


isolate: Clinical E. coli isolate: ec_00161


isolate: Clinical E. coli isolate: ec_00157


isolate: Clinical E. coli isolate: ec_00169


isolate: Clinical E. coli isolate: ec_00166


isolate: Clinical E. coli isolate: ec_00180


isolate: Clinical E. coli isolate: ec_00181


isolate: Clinical E. coli isolate: ec_00197


isolate: Clinical E. coli isolate: ec_00183


isolate: Clinical E. coli isolate: ec_00193


isolate: Clinical E. coli isolate: ec_00195


isolate: Clinical E. coli isolate: ec_00203


isolate: Clinical E. coli isolate: ec_00204


isolate: Clinical E. coli isolate: ec_00218


isolate: Clinical E. coli isolate: ec_00211


isolate: Clinical E. coli isolate: ec_00213


isolate: Clinical E. coli isolate: ec_00209


isolate: Clinical E. coli isolate: ec_00229


isolate: Clinical E. coli isolate: ec_00223


isolate: Clinical E. coli isolate: ec_00219


isolate: Clinical E. coli isolate: ec_00232


isolate: Clinical E. coli isolate: ec_00238


isolate: Clinical E. coli isolate: ec_00237


isolate: Clinical E. coli isolate: ec_00242


isolate: Clinical E. coli isolate: ec_00243


isolate: Clinical E. coli isolate: ec_00255


organism_name: Staphylococcus pseudintermedius


organism_name: Campylobacter jejuni


organism_name: Escherichia coli


asm_submitter: Center for Food Safety and Applied Nutrition


organism_name: Shigella sonnei


asm_submitter: FDA

organism_name: Campylobacter coli


asm_submitter: National Center for Biotechnology Information

isolate: Culture


organism_name: Staphylococcus aureus


organism_name: Listeria monocytogenes


asm_submitter: FDA Center for Food Safety and Applied Nutrition


asm_submitter: CDC


organism_name: Vibrio alginolyticus


organism_name: Pseudomonas aeruginosa


asm_submitter: Centers for Disease Control and Prevention


organism_name: Vibrio cholerae


asm_submitter: Michigan Department of Health and Human Services


organism_name: Enterobacter oligotrophicus


asm_submitter: National Clinical Research Center for Infectious Diseases

organism_name: Enterococcus faecium


asm_submitter: University of California, Irvine

organism_name: Flavobacterium sp. MMLR14_040


organism_name: Erwinia sp. MMLR14_017


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


organism_name: Klebsiella pneumoniae


asm_submitter: National Animal Disease Center


asm_submitter: Chung-Ang university

excluded_from_refseq: many frameshifted proteins

organism_name: Staphylococcus pseudoxylosus


asm_submitter: Beijing YuGen Pharmaceutical Co., Ltd

organism_name: Bifidobacterium longum


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: USDA FSIS


organism_name: Vibrio fluvialis


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica


organism_name: Escherichia coli


asm_submitter: Federal University of Vicosa

excluded_from_refseq: unverified source organism

organism_name: Pseudomonas carnis


asm_submitter: University of Oklahoma

organism_name: Clostridium tanneri


asm_submitter: Oregon State University

organism_name: Streptomyces scabiei


asm_submitter: USDA/ARS/WRRC/PSM


organism_name: Shigella flexneri


asm_submitter: FDA


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: National Center for Biotechnology Information

organism_name: Staphylococcus aureus


asm_submitter: University of Udine

organism_name: Legionella pneumophila


organism_name: Pseudomonas aeruginosa


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Legionella pneumophila subsp. fraseri


organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


asm_submitter: CDC


organism_name: Shigella sonnei


annotation_name: Annotation submitted by Battelle Memorial Institute

annotation_provider: Battelle Memorial Institute

asm_submitter: Battelle Memorial Institute

organism_name: Bacillus thuringiensis serovar toumanoffi


asm_submitter: Centers for Disease Control and Prevention


organism_name: Campylobacter fetus


asm_submitter: FDA Center for Food Safety and Applied Nutrition

organism_name: Escherichia coli


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

isolate: whole organism


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Campylobacter upsaliensis


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Worthington


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Litchfield


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


asm_submitter: Public Health Agency of Canada

organism_name: Salmonella enterica subsp. enterica serovar London


asm_submitter: Beijing Institute of Microbiology and Epidemiology

organism_name: Providencia sp. PROV280


organism_name: Providencia sp. PROV279


organism_name: Providencia sp. PROV278


asm_submitter: Universiteit Gent

organism_name: Vibrio parahaemolyticus


annotation_name: Annotation submitted by University of Nevada, Reno

annotation_provider: University of Nevada, Reno

asm_submitter: University of Nevada, Reno

organism_name: Burkholderia thailandensis


organism_name: Burkholderia cepacia


organism_name: Providencia sp. PROV277


organism_name: Salmonella enterica


organism_name: Vibrio vulnificus


organism_name: Providencia sp. PROV252


asm_submitter: Anses

organism_name: Streptococcus suis


organism_name: Campylobacter jejuni


organism_name: Providencia sp. PROV236


organism_name: Listeria monocytogenes


organism_name: Campylobacter upsaliensis


organism_name: Providencia sp. PROV228


organism_name: Escherichia coli


organism_name: Shigella sonnei


organism_name: Staphylococcus aureus


organism_name: Pseudomonas aeruginosa


organism_name: Providencia sp. PROV224


asm_submitter: National Clinical Research Center for Infectious Diseases

organism_name: Enterococcus faecium


organism_name: Providencia sp. PROV170


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Salmonella enterica


organism_name: Shigella flexneri


organism_name: Campylobacter lari


organism_name: Providencia sp. PROV162


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica


organism_name: Salmonella enterica subsp. enterica serovar Brandenburg


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Adelaide


organism_name: Escherichia coli


organism_name: Providencia sp. PROV161


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Give


organism_name: Campylobacter coli


organism_name: Campylobacter lari


organism_name: Providencia sp. PROV109


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Providencia sp. PROV103


organism_name: Providencia sp. PROV102


organism_name: Staphylococcus aureus


organism_name: Providencia sp. PROV101


asm_submitter: Research Network Zoonotic Infectious Diseases

organism_name: Escherichia coli


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica


organism_name: Providencia sp. PROV100


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Providencia sp. PROV084


organism_name: Shigella flexneri


organism_name: Shigella sonnei


asm_submitter: CDPHE SARS-CoV-2 submissions


organism_name: Salmonella enterica subsp. enterica serovar Ohio


organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Salmonella enterica subsp. enterica serovar Lubbock


organism_name: Providencia sp. PROV083


organism_name: Escherichia coli


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul


organism_name: Salmonella enterica subsp. enterica serovar Brandenburg


organism_name: Providencia sp. PROV081


asm_submitter: National Center for Biotechnology Information

organism_name: Staphylococcus aureus


organism_name: Salmonella enterica


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Muenster


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar London


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Providencia sp. PROV080


organism_name: Providencia sp. PROV073


organism_name: Providencia sp. PROV050


organism_name: Providencia sp. PROV048


organism_name: Providencia sp. PROV008


organism_name: Providencia sp. PROV007


asm_submitter: Clemson University

excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Xylella fastidiosa subsp. fastidiosa


asm_submitter: German Federal Institute for Risk Assessment

organism_name: Escherichia coli


asm_submitter: CDC


organism_name: Salmonella enterica subsp. enterica serovar Altona


organism_name: Salmonella enterica


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Aeromonas bestiarum


organism_name: Aeromonas salmonicida


organism_name: Aeromonas sobria


organism_name: Pseudomonas aeruginosa


infraspecific_name: strain=BCCM/LMG 1272


isolate: Cystic fibrosis patient


infraspecific_name: strain=P. aeruginosa


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar Agona


asm_submitter: FDA Center for Food Safety and Applied Nutrition


organism_name: Pasteurella multocida


infraspecific_name: strain=Pasteurella #11


infraspecific_name: strain=Pasteurella #12


infraspecific_name: strain=Pasteurella #13


infraspecific_name: strain=P multocida #14


infraspecific_name: strain=Pateurella #1


infraspecific_name: strain=Pateurella #3


infraspecific_name: strain=Pateurella #2


infraspecific_name: strain=A22 B12174


infraspecific_name: strain=Pateurella #4


infraspecific_name: strain=Pateurella #5


infraspecific_name: strain=Pateurella #6


infraspecific_name: strain=Pateurella #7


infraspecific_name: strain=Pateurella #8


infraspecific_name: strain=Pateurella #9


infraspecific_name: strain=Pasteurella #10


organism_name: Citrobacter freundii


isolate: isolated from rhizosphere


organism_name: Escherichia coli


organism_name: Staphylococcus aureus CI8


organism_name: Staphylococcus aureus CI10


organism_name: Staphylococcus aureus DAR3173


infraspecific_name: strain=PFGE type I1-ST5-IVa, spat 311

isolate: patient

organism_name: Staphylococcus aureus


isolate: clinical isolate


asm_submitter: Center for Food Safety and Applied Nutrition

organism_name: Salmonella enterica


organism_name: Shigella flexneri


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


organism_name: Shigella sonnei


asm_submitter: Public Health England

organism_name: Yersinia enterocolitica


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Brandenburg


organism_name: Salmonella enterica subsp. enterica serovar Bredeney


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Campylobacter coli


organism_name: Pseudomonas aeruginosa


organism_name: Escherichia coli


asm_submitter: US Food and Drug Administration


organism_name: Clostridioides difficile


asm_submitter: Mahidol University

organism_name: Lactobacillus johnsonii


annotation_name: Annotation submitted by Georg-August-University Goettingen

annotation_provider: Georg-August-University Goettingen

asm_submitter: Georg-August-University Goettingen

organism_name: Pseudomonas hunanensis


organism_name: Staphylococcus aureus


organism_name: Shinella zoogloeoides


asm_submitter: University of Washington

organism_name: Candidatus Thioglobus autotrophicus


organism_name: Proteus vulgaris


organism_name: Salmonella enterica


organism_name: Shigella flexneri


asm_submitter: USDA FSIS


organism_name: Campylobacter jejuni


organism_name: Yersinia enterocolitica


organism_name: Acinetobacter baumannii


asm_submitter: University of Minnesota

organism_name: Sinorhizobium meliloti


asm_submitter: UMR5557 Laboratoire d'Ecologie Microbienne

organism_name: Pseudomonas soli


asm_submitter: Federal University of Vicosa

excluded_from_refseq: fragmented assembly


organism_name: Chryseobacterium sp. JV558


asm_submitter: FDA


organism_name: Sinorhizobium medicae


asm_submitter: California Institute of Technology

organism_name: Gammaproteobacteria bacterium