organism_name: Lachnospiraceae bacterium


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: Washington University School of Medicine

assembly_level: Contig

assembly_type: haploid

excluded_from_refseq: derived from metagenome

genome_rep: Full

group: bacteria

organism_name: Ruminococcus sp.

paired_asm_comp: identical

release_type: Major

version_status: latest


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Peptococcaceae bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Collinsella sp.


organism_name: Slackia sp.


organism_name: Acutalibacteraceae bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Clostridia bacterium


organism_name: Anaerostipes hadrus


organism_name: Faecalibacterium sp.


organism_name: Blautia wexlerae


organism_name: Bacteroides stercoris


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Faecalibacterium prausnitzii


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome

organism_name: Paraprevotella clara


organism_name: Eggerthellaceae bacterium


organism_name: Lachnospira sp.


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Adlercreutzia sp.


organism_name: Clostridium sp.


organism_name: [Lactobacillus] rogosae


organism_name: Prevotellamassilia sp.


organism_name: Oscillospiraceae bacterium


organism_name: Collinsella sp.


organism_name: Streptococcus salivarius


organism_name: Akkermansia sp.


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Ruminococcus sp.


organism_name: Lachnospiraceae bacterium


organism_name: Bulleidia sp.


organism_name: Agathobacter sp.


organism_name: Muribaculaceae bacterium


organism_name: Prevotella sp.


excluded_from_refseq: derived from metagenome; genome length too large

organism_name: Intestinibacter bartlettii


organism_name: Eggerthella lenta


organism_name: Alistipes onderdonkii


organism_name: Collinsella stercoris


organism_name: Dialister invisus


organism_name: Eubacterium sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Mediterraneibacter faecis


organism_name: Dorea longicatena


organism_name: Ruminococcus bromii


organism_name: Oscillospiraceae bacterium


organism_name: Collinsella sp.


organism_name: Ruminococcus sp.


organism_name: Segatella copri


organism_name: Blautia hansenii


organism_name: Thomasclavelia ramosa


organism_name: Fusicatenibacter saccharivorans


organism_name: Anaerotignum sp.


organism_name: Mediterraneibacter torques


organism_name: Gemmiger sp.


organism_name: Bacilli bacterium


organism_name: Blautia sp.


organism_name: [Clostridium] scindens


organism_name: Enterocloster sp.


organism_name: Megasphaera massiliensis

refseq_category: reference genome


organism_name: Romboutsia timonensis


organism_name: Eubacterium sp.


organism_name: Adlercreutzia sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Bacteroidaceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Bifidobacterium criceti


organism_name: Agathobacter rectalis


organism_name: Holdemanella biformis


organism_name: Prevotella sp.


organism_name: [Clostridium] leptum


organism_name: Collinsella bouchesdurhonensis


organism_name: Oscillospiraceae bacterium


group: archaea

organism_name: Methanobrevibacter smithii


organism_name: Clostridium saudiense


organism_name: Caecibacter sp.


organism_name: Blautia sp.


organism_name: Ruthenibacterium sp.


organism_name: Christensenellales bacterium


organism_name: Bacilli bacterium


organism_name: Monoglobus pectinilyticus


organism_name: Acutalibacteraceae bacterium


organism_name: Emergencia sp.


organism_name: Evtepia sp.


organism_name: Blautia faecis


organism_name: Ruminococcus sp.


organism_name: Anaerovoracaceae bacterium


organism_name: Faecalibacterium prausnitzii


organism_name: Sellimonas sp.


organism_name: Merdibacter sp.


organism_name: Bacteroides caccae


organism_name: Massilimicrobiota sp.


organism_name: Allofournierella sp.


organism_name: Clostridia bacterium


organism_name: Blautia sp.


organism_name: Eggerthellaceae bacterium


organism_name: Frisingicoccus sp.


organism_name: Alistipes onderdonkii


organism_name: Oscillospiraceae bacterium


organism_name: Eubacterium ventriosum


organism_name: Acutalibacteraceae bacterium


organism_name: Negativibacillus sp.


organism_name: Christensenellales bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Desulfovibrio fairfieldensis


organism_name: Bacillota bacterium


organism_name: [Eubacterium] siraeum


organism_name: Akkermansia sp.


organism_name: Collinsella sp.


organism_name: Gemmiger sp.


organism_name: Streptococcus anginosus


organism_name: Clostridia bacterium


organism_name: Ruminococcus sp.


organism_name: Eggerthellaceae bacterium


organism_name: Lactococcus lactis


organism_name: Alistipes finegoldii


organism_name: Oscillospiraceae bacterium


organism_name: Streptococcus mutans


excluded_from_refseq: contaminated; annotation fails MAG completeness check; derived from metagenome

organism_name: Pseudocoprococcus catus


organism_name: Acutalibacteraceae bacterium


organism_name: Catenibacterium sp.


organism_name: Lachnospiraceae bacterium


organism_name: Prevotellamassilia sp.


organism_name: Longicatena sp.


organism_name: Bifidobacterium adolescentis


organism_name: Succinivibrio sp.


organism_name: Treponema sp.


organism_name: Bacteroidales bacterium


organism_name: Clostridia bacterium


organism_name: Alistipes sp.


organism_name: Paludibacteraceae bacterium


organism_name: Streptococcus equinus


organism_name: Fibrobacteraceae bacterium


organism_name: Saccharimonadaceae bacterium (SeqCode)


organism_name: Turicibacter sp.


organism_name: Ruminococcus sp.


organism_name: Bacteroidaceae bacterium


organism_name: Faecalimonas sp.


organism_name: Clostridium sp.


organism_name: Methanobrevibacter sp.


organism_name: Muribaculaceae bacterium


organism_name: Acutalibacteraceae bacterium


organism_name: Prevotellamassilia sp.


organism_name: Bifidobacteriaceae bacterium


organism_name: Treponemataceae bacterium


organism_name: Bacteroidales bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Alistipes sp.


organism_name: Paludibacteraceae bacterium


organism_name: Clostridia bacterium


organism_name: Agathobacter sp.


excluded_from_refseq: unverified source organism; derived from metagenome; genome length too large

organism_name: Ruminococcus bromii


organism_name: Alphaproteobacteria bacterium


organism_name: Prevotella sp.


organism_name: Bacilli bacterium


organism_name: Olegusella sp.


organism_name: Eubacterium sp.


organism_name: Ruminococcus sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Kandleria vitulina


organism_name: Bifidobacterium ruminantium


organism_name: Oscillospiraceae bacterium


organism_name: Succinivibrionaceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Muribaculaceae bacterium


organism_name: Treponema sp.


organism_name: Cellulosilyticum sp.


organism_name: Paludibacteraceae bacterium


organism_name: Schaedlerella sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Agathobacter sp.


organism_name: Bacteroidales bacterium


organism_name: Alistipes sp.


organism_name: Bacteroidaceae bacterium


organism_name: Fibrobacteraceae bacterium


organism_name: Macrococcoides canis


organism_name: Ruminococcus sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Prevotella sp.


organism_name: Clostridia bacterium


organism_name: Methanobrevibacter sp.


organism_name: Methanosphaera sp.


organism_name: Methanocorpusculum sp.


organism_name: Acinetobacter pseudolwoffii


organism_name: Caryophanon sp.


organism_name: Eubacterium sp.


organism_name: Phascolarctobacterium sp.


organism_name: Anaerovoracaceae bacterium


organism_name: Treponema sp.


organism_name: Christensenellales bacterium


organism_name: Bacteroidaceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Bifidobacterium sp.


organism_name: Atopobiaceae bacterium


organism_name: Acutalibacteraceae bacterium


organism_name: Bacteroidales bacterium


organism_name: Paludibacteraceae bacterium


organism_name: Parafannyhessea umbonata


organism_name: Agathobacter sp.


organism_name: Blautia sp.


organism_name: Clostridia bacterium


organism_name: Ruminococcus sp.


organism_name: Muribaculaceae bacterium


organism_name: Phascolarctobacterium sp.


organism_name: Phocaeicola sp.


organism_name: Frisingicoccus sp.


organism_name: Turicibacter sp.


organism_name: Olegusella sp.


organism_name: Spirochaetota bacterium


organism_name: Treponema sp.


organism_name: Bifidobacterium merycicum


organism_name: Acutalibacteraceae bacterium


organism_name: Bacteroidaceae bacterium


organism_name: Akkermansia sp.


organism_name: Succinivibrionaceae bacterium


organism_name: Prevotellamassilia sp.


organism_name: Oscillospiraceae bacterium


organism_name: Anaerovibrio sp.


organism_name: Ruminobacter sp.


organism_name: Bifidobacterium sp.


organism_name: Muribaculaceae bacterium


organism_name: Bifidobacteriaceae bacterium


organism_name: Bacteroidales bacterium


organism_name: Agathobacter sp.


organism_name: Fibrobacteraceae bacterium


organism_name: Prevotella sp.


organism_name: Lachnospiraceae bacterium


organism_name: Methanobrevibacter sp.


organism_name: Streptococcus sp.


organism_name: Faecalimonas sp.


organism_name: Ruminococcus sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Absicoccus porci


organism_name: Clostridia bacterium


organism_name: Erysipelotrichaceae bacterium


organism_name: Selenomonadaceae bacterium


organism_name: Collinsella sp.


asm_submitter: Shanghai Pulmonary Hospital

assembly_level: Scaffold

organism_name: Staphylococcus aureus


asm_submitter: Shanxi Medical University

organism_name: Brachybacterium sp. J153


organism_name: Dialister sp.


organism_name: Bacteroidales bacterium


organism_name: Zafaria sp. J156


organism_name: Prevotella sp.


organism_name: Segatella copri


organism_name: Bacilli bacterium


organism_name: Evtepia sp.


organism_name: Collinsella aerofaciens


organism_name: Bifidobacterium animalis


organism_name: Brachymonas sp. J145


organism_name: Oribacterium sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Negativibacillus sp.


organism_name: Oscillospiraceae bacterium


organism_name: Parolsenella sp.


organism_name: Bulleidia sp.


organism_name: Ruminococcus sp.


organism_name: Prevotellamassilia sp.


organism_name: Streptococcus salivarius


organism_name: Collinsella sp.


organism_name: Eubacterium ramulus


organism_name: Faecalibacterium prausnitzii


organism_name: Ellagibacter isourolithinifaciens


organism_name: Alistipes ihumii


organism_name: Dialister sp.


organism_name: Gemmiger sp.


organism_name: Christensenellales bacterium


organism_name: Faecalitalea cylindroides


organism_name: Faecalibacillus intestinalis


organism_name: Segatella copri


organism_name: Eggerthellaceae bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Faecalibacterium sp.


organism_name: Clostridium sp.


organism_name: Blautia sp.


organism_name: Ruthenibacterium lactatiformans


organism_name: Massilioclostridium sp.


organism_name: Anaerostipes hadrus


organism_name: Ligilactobacillus ruminis


organism_name: Collinsella sp.


organism_name: Allocoprococcus comes


organism_name: Lachnospiraceae bacterium


organism_name: Christensenellaceae bacterium


organism_name: Agathobacter rectalis


organism_name: Streptococcus thermophilus


organism_name: Fusobacterium sp.


organism_name: Lacticaseibacillus paracasei


organism_name: Bifidobacterium longum


organism_name: Slackia isoflavoniconvertens


organism_name: Gemmiger formicilis


organism_name: Shigella flexneri


organism_name: Anaerobutyricum hallii


organism_name: Enterococcus hirae


organism_name: Acutalibacteraceae bacterium


organism_name: Paludibacteraceae bacterium


organism_name: Prevotella pectinovora


organism_name: Collinsella sp.


organism_name: Dialister invisus


organism_name: Ruminococcus sp.


organism_name: Faecalibacterium prausnitzii


asm_submitter: DOE Joint Genome Institute

organism_name: Alphaproteobacteria bacterium


organism_name: Clostridia bacterium


organism_name: Fidelibacterota bacterium


organism_name: Acidimicrobiales bacterium


organism_name: Arenicellales bacterium


organism_name: Nitrospinaceae bacterium


organism_name: Deltaproteobacteria bacterium


asm_submitter: QUAID-I-AZAM UNIVERSITY ISLAMABAD

infraspecific_name: strain=EC-Ik-M

organism_name: Escherichia coli


asm_submitter: Bern University


asm_submitter: University of Bern


asm_submitter: Washington State University

organism_name: Microvirga sp. CF3062


asm_submitter: Chinese Academy of Agricultural Sciences

organism_name: Acidaminococcus fermentans


organism_name: Microvirga sp. CF3016


asm_submitter: Paris Saclay University

organism_name: Klebsiella pneumoniae


organism_name: Klebsiella quasipneumoniae


organism_name: Enterobacter mori


organism_name: Enterobacter hormaechei


excluded_from_refseq: annotation fails completeness check


asm_submitter: University Hospital Muenster

organism_name: Enterococcus faecium


asm_submitter: University of Calgary

excluded_from_refseq: from large multi-isolate project

organism_name: Pseudomonas aeruginosa


asm_submitter: University of Trento

organism_name: Enterococcus faecalis


organism_name: Holdemanella biformis


organism_name: Catenibacterium mitsuokai


organism_name: Clostridium phoceensis


organism_name: Veillonella atypica


organism_name: Clostridium fessum


organism_name: Dialister histaminiformans


organism_name: Collinsella sp. CM84Y_54


organism_name: Bacteroides fragilis


organism_name: Slackia isoflavoniconvertens


excluded_from_refseq: genus undefined


organism_name: Clostridium sp. CM74B_53


organism_name: Bifidobacterium longum


organism_name: Veillonella parvula


organism_name: Enterocloster aldenensis


organism_name: Oscillospiraceae bacterium CM710M_45


organism_name: Enorma massiliensis


organism_name: Escherichia coli


organism_name: Bacteroides uniformis


organism_name: Phocaeicola dorei


organism_name: Acidaminococcus intestini


organism_name: Enterocloster citroniae


organism_name: Phascolarctobacterium faecium


organism_name: Catenibacterium mitsuokai subsp. tridentinum


organism_name: Bifidobacterium animalis


organism_name: Dorea formicigenerans


asm_submitter: Chinese Center for Disease Control and Prevention

organism_name: Stenotrophomonas sepilia


organism_name: Dialister histaminiformans


organism_name: Oscillospiraceae bacterium CM18GR_54


organism_name: Stenotrophomonas muris


organism_name: Stenotrophomonas pavanii


organism_name: Stenotrophomonas maltophilia


organism_name: Stenotrophomonas geniculata


organism_name: Stenotrophomonas hibiscicola


organism_name: Stenotrophomonas sp. SMYL82


excluded_from_refseq: contaminated; unverified source organism

organism_name: Stenotrophomonas sp. SMYL28


organism_name: Stenotrophomonas sp. SMYL41


organism_name: Stenotrophomonas sp. SMYL89


organism_name: Stenotrophomonas sp. SMYL11


organism_name: Stenotrophomonas sp. SMYL86


organism_name: Stenotrophomonas sp. SMYL20


organism_name: Stenotrophomonas sp. SMYL8


asm_submitter: The First Hospital of Zhejiang University School of Medicine

organism_name: Klebsiella pneumoniae


organism_name: Pseudomonas aeruginosa


organism_name: Escherichia coli


asm_submitter: McMaster University

organism_name: Streptomyces sp. WAC07094


asm_submitter: University of Oviedo

organism_name: Bacillus nitratireducens

relation_to_type_material: assembly from type material


asm_submitter: University of Utah

organism_name: Streptomyces sp. GSL17-113


annotation_name: Annotation submitted by Cladostephus spongiosus

annotation_provider: Cladostephus spongiosus

asm_submitter: Cladostephus spongiosus

organism_name: Agarivorans aestuarii


asm_submitter: Environment and Plant Protection Institute,CATAS

assembly_level: Complete Genome

organism_name: Dyella aluminiiresistens


asm_submitter: Zhejiang University

organism_name: Acinetobacter pittii


asm_submitter: Johns Hopkins University

excluded_from_refseq: out of scope for the RefSeq project

isolate: delta-vioS

organism_name: Chromobacterium subtsugae


asm_submitter: college of veterinary medicine

organism_name: Streptococcus suis


asm_submitter: Jinhua Central Hospital

organism_name: Porphyromonas pogonae


asm_submitter: National Institute of Health

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Acinetobacter baumannii


asm_submitter: Jeonbuk National University

organism_name: Bacillus velezensis


asm_submitter: Changchun Veterinary Research Institute

organism_name: Brucella melitensis


asm_submitter: University of Galway


asm_submitter: Zhejiang Sci-Tech University

organism_name: Aurantiacibacter hainanensis


asm_submitter: Chungnam National University

assembly_level: Chromosome

organism_name: Lentzea sp. DG1S-22


asm_submitter: Hospital Universitario Ramon y Cajal (IRYCIS)

organism_name: Klebsiella pneumoniae


organism_name: Pseudomonas aeruginosa


asm_submitter: Southwest Medical University


asm_submitter: Northwest A&F University

organism_name: Clostridium perfringens


asm_submitter: Shanghai Jiao Tong University

infraspecific_name: strain=CGMCC 14177

organism_name: Lactiplantibacillus plantarum


infraspecific_name: strain=CGMCC 15358


asm_submitter: Swedish University of Agricultural Sciences

organism_name: Microaceticoccus formicicus


asm_submitter: Shanxi Medical University

organism_name: Brachybacterium sp. J144


asm_submitter: Shanghai Pulmonary Hospital

organism_name: Staphylococcus aureus


asm_submitter: University of Trento

organism_name: Veillonella parvula


organism_name: Dysosmobacter welbionis


organism_name: Coriobacteriaceae bacterium CM84B_73


organism_name: Parolsenella catena


organism_name: Enterococcus faecium


organism_name: Oscillospiraceae bacterium CM18GR_63


asm_submitter: National Research Council

organism_name: Serratia quinivorans


organism_name: Catenibacterium mitsuokai subsp. tridentinum


asm_submitter: Universidad Andres Bello

organism_name: Flavobacterium facile


asm_submitter: University of Pretoria


asm_submitter: Chinese Center for Disease Control and Prevention

organism_name: Stenotrophomonas sepilia


organism_name: Stenotrophomonas maltophilia


organism_name: Stenotrophomonas geniculata


organism_name: Stenotrophomonas hibiscicola


organism_name: Stenotrophomonas sp. SMYL36


organism_name: Stenotrophomonas sp. SMYL7


asm_submitter: University of Calgary

organism_name: Pseudomonas aeruginosa


asm_submitter: Washington University in St. Louis

organism_name: Streptomyces sp. JV190


organism_name: Streptomyces sp. SP17KL33


organism_name: Streptomyces sp. JV185


organism_name: Streptomyces sp. JV186


organism_name: Streptomyces sp. JV184


organism_name: Streptomyces sp. JV176


organism_name: Streptomyces sp. SP18CS02


organism_name: Streptomyces sp. JV181


organism_name: Streptomyces sp. SP17BM10


organism_name: Streptomyces sp. SP18ES09


organism_name: Streptomyces sp. BE282


organism_name: Streptomyces sp. BE308


organism_name: Streptomyces sp. BE133


organism_name: Streptomyces sp. BE147


organism_name: Streptomyces sp. BE20


organism_name: Streptomyces sp. SP18BB07


annotation_name: Annotation submitted by Chang Jung Christian University

annotation_provider: Chang Jung Christian University

asm_submitter: Chang Jung Christian University

excluded_from_refseq: unverified source organism

organism_name: Bacillus subtilis


annotation_name: Annotation submitted by Microbiology Research Center for Sustainability, Faculty of Life and Environmental Sciences, University of Tsukuba

organism_name: Luteolibacter sp. LG18


annotation_name: Annotation submitted by Plant Environmental Microbiology Group, Institute of Plant Science and Resources, Okayama University

organism_name: Erythrobacter sp. Dej080120_24


annotation_provider: Plant Environmental Microbiology Group, Institute of Plant Science and Resources, Okayama University

organism_name: Roseicyclus marinus


asm_submitter: Plant Environmental Microbiology Group, Institute of Plant Science and Resources, Okayama University

organism_name: Thalassospira tepidiphila


organism_name: Flagellimonas marinaquae


organism_name: Maricaulis maris


organism_name: Marinomonas pontica


organism_name: Planctobacterium marinum


annotation_name: Annotation submitted by Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST)

infraspecific_name: strain=CYCD

organism_name: Tenuifilaceae bacterium CYCD


annotation_name: Annotation submitted by Tokyo Institute of Technology

annotation_provider: Tokyo Institute of Technology

asm_submitter: Tokyo Institute of Technology

excluded_from_refseq: derived from metagenome


annotation_name: Annotation submitted by Laboratory for Microbiome Sciences, Center for Integrative Medical Sciences, RIKEN

infraspecific_name: strain=JCM 19861

organism_name: Bifidobacterium adolescentis

relation_to_type_material: assembly from heterotypic synonym type material


annotation_name: Annotation submitted by PAGS

annotation_provider: PAGS

asm_submitter: PAGS

organism_name: Streptococcus pneumoniae


annotation_provider: Laboratory for Microbiome Sciences, Center for Integrative Medical Sciences, RIKEN

organism_name: Fusobacterium nucleatum


asm_submitter: Laboratory for Microbiome Sciences, Center for Integrative Medical Sciences, RIKEN


annotation_name: Annotation submitted by National Institute of Infectious Diseases

excluded_from_refseq: RefSeq annotation failed

organism_name: Neisseria meningitidis


annotation_provider: National Institute of Infectious Diseases


annotation_name: Annotation submitted by Fukui Prefectural University

annotation_provider: Fukui Prefectural University

asm_submitter: Fukui Prefectural University

infraspecific_name: strain=SANA

organism_name: Kamagatella elastica


annotation_name: Annotation submitted by Division of Infection Control and Prevention, Medical Mycology Research Center, Chiba University


annotation_name: Annotation submitted by Kyoto University

annotation_provider: Kyoto University

asm_submitter: Kyoto University

organism_name: Pyrodictium abyssi


annotation_name: Annotation submitted by Tokyo University of Pharmacy and Life Sciences

organism_name: Pandoraea sputorum


annotation_name: Annotation submitted by Lab of Bio-molecular and Gene technology, Institute of Biotechnology and Environment, Tay Nguyen University

organism_name: Bacillus velezensis


annotation_name: Annotation submitted by Tokyo Dental Collage

annotation_provider: Tokyo Dental Collage

asm_submitter: Tokyo Dental Collage

organism_name: Fusobacterium vincentii


annotation_name: Annotation submitted by Keio University

annotation_provider: Keio University

asm_submitter: Keio University

infraspecific_name: strain=JCM 10645

organism_name: Solobacterium moorei


organism_name: Limnobacter thiooxidans


organism_name: Kitasatospora aureofaciens


annotation_provider: Tokyo University of Pharmacy and Life Sciences

organism_name: Geobacter sp. 60473


annotation_name: Annotation submitted by National Institute of Advanced Industrial Science and Technology

organism_name: Congregicoccus parvus


annotation_name: Annotation submitted by Laboratory of Fish Diseases Faculty of Veterinary Medicine, Okayama University of Science

organism_name: Edwardsiella anguillarum


annotation_provider: Laboratory of Fish Diseases Faculty of Veterinary Medicine, Okayama University of Science


asm_submitter: Laboratory of Fish Diseases Faculty of Veterinary Medicine, Okayama University of Science


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

asm_submitter: Cornell University

infraspecific_name: strain=WRB ZX-0002


asm_submitter: CSIR-Institute of Microbial Technology

organism_name: Acinetobacter baumannii


asm_submitter: Tarim University

infraspecific_name: strain=TRM 70351

organism_name: Streptomyces solitudinis


asm_submitter: Shan Tou University

organism_name: Maribacter flavus


infraspecific_name: strain=TRM 70361

organism_name: Streptomyces rubellus


asm_submitter: Hohai University

organism_name: Flagellimonas taeanensis


organism_name: Flavobacterium rakeshii


asm_submitter: Bursa Uludag University, Faculty of Veterinary Medicine

organism_name: Pseudomonas aeruginosa


organism_name: Maribacter cobaltidurans


organism_name: Pseudomonas inefficax


asm_submitter: Qingdao Agricultural University

organism_name: Limosilactobacillus reuteri


organism_name: Aquipseudomonas alcaligenes


organism_name: Metapseudomonas otitidis


organism_name: Pseudomonas ulcerans


organism_name: Pseudomonas asiatica


organism_name: Pseudomonas carassii


organism_name: Aeromonas sp. 43P


organism_name: Pseudomonas auratipiscis


organism_name: Pseudomonas soli


organism_name: Aeromonas caviae


organism_name: Shewanella xiamenensis


asm_submitter: Guangdong Academy of Sciences

organism_name: Altererythrobacter litoralis


asm_submitter: University of Galway

organism_name: Klebsiella michiganensis


asm_submitter: Kyonggi university

organism_name: Pedobacter albus


organism_name: Pedobacter flavus


asm_submitter: Nanjing Agricultural University

organism_name: Methylocystis iwaonis


asm_submitter: Korea Institute of Ocean Science and Technology

organism_name: Methylophaga thalassica


asm_submitter: Chung-Ang university

organism_name: Enterococcus lactis


asm_submitter: Third Institute of Oceanography(TIO) of the Ministry of Natural Resources

organism_name: Microbacterium limosum


organism_name: Leuconostoc mesenteroides


asm_submitter: University of California,Berkeley

organism_name: Pseudomonas syringae pv. syringae


asm_submitter: Zhejiang University of Technology

infraspecific_name: strain=B

organism_name: Shewanella oncorhynchi


infraspecific_name: strain=A

organism_name: Pseudomonas psychrophila


asm_submitter: Ningbo university

infraspecific_name: strain=ceto

organism_name: Cetobacterium somerae


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Enterobacter hormaechei


asm_submitter: FDA

organism_name: Enterococcus faecalis


organism_name: Serratia marcescens


organism_name: Salmonella enterica subsp. enterica serovar Anatum


asm_submitter: CDC

organism_name: Salmonella enterica


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


organism_name: Shigella flexneri


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Agona


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter upsaliensis


asm_submitter: National Centre For Cell Science (NCCS)

organism_name: Alkalimonas cellulosilytica


organism_name: Klebsiella pneumoniae


asm_submitter: USDA-ARS-NCAUR

organism_name: Bacillus thuringiensis


organism_name: Bacillus toyonensis


asm_submitter: Utah Public Health Laboratory Infectious Disease submission group

organism_name: Pseudomonas aeruginosa


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Listeria monocytogenes


organism_name: Shigella sonnei


asm_submitter: The University of Texas at Austin

organism_name: Orbus wheelerorum


asm_submitter: Xiangya hospital, Central South University

organism_name: Shewanella xiamenensis


organism_name: Alkalimonas mucilaginosa


annotation_name: Annotation submitted by University of Illinois at Chicago

annotation_provider: University of Illinois at Chicago

asm_submitter: University of Illinois at Chicago

organism_name: Shewanella oneidensis


organism_name: Shigella flexneri


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


asm_submitter: Military Health Institute

organism_name: Bartonella grahamii subsp. shimonis


asm_submitter: CIIMAR - Interdisciplinary Centre of Marine and Environmental Research

organism_name: Rhodococcus chondri


organism_name: Nocardiopsis codii


annotation_name: Annotation submitted by Arkansas State University

annotation_provider: Arkansas State University

asm_submitter: Arkansas State University

organism_name: Sodalis sp. (in: enterobacteria)


organism_name: Salmonella enterica


organism_name: Escherichia coli


asm_submitter: South China University of Technology

organism_name: Weissella paramesenteroides


asm_submitter: Technical University of Denmark

organism_name: Nocardia sp. NBC_01503


organism_name: Streptomyces sp. NBC_01498


organism_name: Rhodococcus artemisiae


organism_name: Nocardiopsis tropica


excluded_from_refseq: fragmented assembly; not used as type

infraspecific_name: strain=VKM Ac-1457


asm_submitter: Shanghai Jiaotong University

organism_name: Pseudomonas sp. JS3066


asm_submitter: USDA FSIS

organism_name: Campylobacter jejuni


asm_submitter: Huashan Hospital of Fudan University

organism_name: Klebsiella pneumoniae


asm_submitter: Gradiant Bioconvergence

organism_name: Lactiplantibacillus plantarum subsp. plantarum


asm_submitter: Renji Hospital, Shanghai Jiao Tong University School of Medicine


asm_submitter: Shanxi Medical University

organism_name: Pseudarthrobacter sp. J64


organism_name: Pseudarthrobacter sp. J75


organism_name: Pseudarthrobacter sp. J47


organism_name: Pseudomonas aeruginosa


asm_submitter: Shandong University

organism_name: Hyphobacterium marinum


organism_name: Hyphobacterium lacteum


asm_submitter: Ministry of Health

organism_name: Listeria monocytogenes


asm_submitter: Sun Yat-Sen University

infraspecific_name: strain=SYSU M7M531

organism_name: Stomatohabitans albus


infraspecific_name: strain=SYSU M7M538


asm_submitter: Southern University of Science and Technology

excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Actinomycetota bacterium


organism_name: SAR324 cluster bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Bacteroidota bacterium


organism_name: Chloroflexota bacterium


organism_name: Pseudomonadota bacterium


organism_name: Candidatus Latescibacterota bacterium


organism_name: Acidobacteriota bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Candidatus Poribacteria bacterium


organism_name: Fidelibacterota bacterium


organism_name: Thermoproteota archaeon


organism_name: Thermoplasmatota archaeon


organism_name: Planctomycetota bacterium


organism_name: Myxococcota bacterium


organism_name: Bdellovibrionota bacterium


organism_name: Gemmatimonadota bacterium


organism_name: Thermodesulfobacteriota bacterium


organism_name: Cyanobacteriota bacterium


organism_name: Actinomycetota bacterium


organism_name: Bacteroidota bacterium


organism_name: Chloroflexota bacterium


organism_name: Pseudomonadota bacterium


organism_name: Listeria monocytogenes


organism_name: Candidatus Latescibacterota bacterium


organism_name: Nitrospinota bacterium


organism_name: Candidatus Poribacteria bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: bacterium


organism_name: Thermoplasmatota archaeon


organism_name: Planctomycetota bacterium


organism_name: Acidobacteriota bacterium


organism_name: SAR324 cluster bacterium


organism_name: Bdellovibrionota bacterium


organism_name: Gemmatimonadota bacterium


organism_name: Fidelibacterota bacterium


organism_name: Actinomycetota bacterium


organism_name: Bacteroidota bacterium


organism_name: Chloroflexota bacterium


organism_name: Pseudomonadota bacterium


asm_submitter: McGill University

organism_name: Candidatus Alloenteromonas sp.


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Bifidobacterium merycicum


organism_name: Acutalibacteraceae bacterium


organism_name: Treponema sp.


organism_name: Sharpea azabuensis


organism_name: Ruminococcus sp.


organism_name: Methanosphaera sp.


organism_name: Candidatus Cryptobacteroides sp.


organism_name: Bacilli bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Methanomethylophilus sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Hallerella sp.


organism_name: Anaerovoracaceae bacterium


organism_name: Saccharofermentanaceae bacterium


organism_name: Candidatus Weimeria sp.


organism_name: Eubacterium sp.


organism_name: Succiniclasticum sp.


organism_name: Prevotella sp.


excluded_from_refseq: derived from metagenome; fragmented assembly


organism_name: Candidatus Onthomonas sp.


organism_name: Erysipelotrichaceae bacterium


organism_name: Candidatus Alloenteromonas sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Succinimonas sp.


organism_name: Methanosphaera sp.


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Ruminococcus bromii


organism_name: Methanobrevibacter sp.


organism_name: Treponema sp.


organism_name: Lachnospiraceae bacterium


organism_name: Ruminococcus sp.


organism_name: Candidatus Cryptobacteroides sp.


organism_name: Bacteroidales bacterium


organism_name: Methanomethylophilus sp.


organism_name: Megasphaera elsdenii


organism_name: Succiniclasticum sp.


organism_name: Bulleidia sp.


organism_name: Dialister sp.


organism_name: Prevotella sp.


excluded_from_refseq: derived from metagenome; genome length too large

organism_name: Butyrivibrio hungatei


organism_name: Eubacterium sp.


organism_name: Butyrivibrio sp.


organism_name: Faecousia sp.


organism_name: Candidatus Alloenteromonas sp.


organism_name: Pseudomonadota bacterium


organism_name: Candidatus Latescibacterota bacterium


organism_name: Actinomycetota bacterium


organism_name: Acidobacteriota bacterium


organism_name: Planctomycetota bacterium


organism_name: Thermoplasmatota archaeon


organism_name: Chloroflexota bacterium


organism_name: Bacteroidota bacterium


organism_name: Fidelibacterota bacterium


organism_name: Nitrospinota bacterium


organism_name: Thermoproteota archaeon


organism_name: SAR324 cluster bacterium


organism_name: Myxococcota bacterium


asm_submitter: Academia Sinica

organism_name: Cyanobacterium sp. DS4


organism_name: Streptomyces pseudovenezuelae


organism_name: Streptomyces chartreusis


organism_name: Streptomyces sp. NBC_00589


organism_name: Streptomyces sp. NBC_00588


organism_name: Streptomyces griseorubiginosus


organism_name: Streptomyces sp. NBC_00582


organism_name: Streptomyces sp. NBC_00576


asm_submitter: Texas A&M University

organism_name: Campylobacter coli


organism_name: Streptomyces platensis


organism_name: Streptomyces sp. NBC_00566


organism_name: Streptomyces sp. NBC_00569


asm_submitter: National Center for Biotechnology Information

organism_name: Streptococcus pneumoniae


organism_name: Nocardia sp. NBC_00565


organism_name: Streptomyces sp. NBC_00562


organism_name: Streptomyces clavifer


organism_name: Streptomyces sp. NBC_00557


organism_name: Streptomyces cellulosae


asm_submitter: TU Bergakademie Freiberg

organism_name: Acidiphilium acidophilum


organism_name: Streptomyces longwoodensis


organism_name: Streptomyces sp. NBC_00539


asm_submitter: Aarhus Universitet Tech ENVS

organism_name: Pseudomonas sp. 10C3


asm_submitter: Technical University of Denmark

organism_name: Streptomyces sp. NBC_00536


asm_submitter: University of Warsaw, Faculty of Biology, Institute of Microbiology

organism_name: Pseudomonas sp. AM14(2022)


organism_name: Pseudomonas sp. AM8


organism_name: Pseudomonas sp. Z13


organism_name: Pseudomonas sp. AM4(2022)


organism_name: Pseudomonas sp. Z18(2022)


organism_name: Streptomyces anulatus


organism_name: Streptomyces sp. NBC_00525


organism_name: Streptomyces sp. NBC_00523


asm_submitter: Universidade Federal do Rio Grande do Sul

organism_name: Escherichia coli


excluded_from_refseq: annotation fails completeness check


organism_name: Streptomyces murinus


organism_name: Lentzea sp. NBC_00516


organism_name: Streptomyces europaeiscabiei


organism_name: Nocardia sp. NBC_00508


organism_name: Streptomyces sp. NBC_00503


organism_name: Streptomyces sp. NBC_00869


organism_name: Streptomyces sp. NBC_00825


organism_name: Streptomyces sp. NBC_00822


organism_name: Micromonospora sp. NBC_00821


organism_name: Streptomyces sp. NBC_00820


organism_name: Micromonospora zamorensis


organism_name: Streptomyces griseoaurantiacus


organism_name: Kocuria rhizophila