asm_submitter: University of Wyoming

organism_name: Escherichia coli


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: Northwest A&F University

assembly_level: Scaffold

assembly_type: haploid

genome_rep: Full

group: bacteria

organism_name: Sphingopyxis sp. CCNWLW253

paired_asm_comp: identical

release_type: Major

version_status: latest


organism_name: Mesorhizobium sp. CCNWLY176


organism_name: Kribbella sp. CCNWLY201


asm_submitter: Ningbo University

assembly_level: Contig

organism_name: Aquipuribacter sp. SD81


organism_name: Emticicia sp. 17c


asm_submitter: Second Institute of Oceanography, Ministry of Natural Resources

infraspecific_name: strain=KCTC 52471

organism_name: Aestuarierythrobacter aquiaggeris

refseq_category: reference genome

relation_to_type_material: assembly from type material


asm_submitter: Xinjiang University

organism_name: Kineococcus sp. G2


asm_submitter: Xinjiang Academy of Agricultural Sciences

organism_name: Pontibacter sp. 13R65


infraspecific_name: strain=DSM 12677

organism_name: Sphingobium aromaticiconvertens


infraspecific_name: strain=KACC 19119

organism_name: Fulverythrobacter fulvus


infraspecific_name: strain=KCTC 52607

organism_name: Alteraurantiacibacter palmitatis


infraspecific_name: strain=DSM 106441

organism_name: Sphingobium aquiterrae


organism_name: Alteraurantiacibacter lauratis


infraspecific_name: strain=DSM 15761

organism_name: Sphingomonas panni


infraspecific_name: strain=DSM 105181

organism_name: Sphingobium aromaticivastans


asm_submitter: ISCIII

organism_name: Vibrio cholerae


asm_submitter: Center for Food Safety and Applied Nutrition

excluded_from_refseq: from large multi-isolate project

organism_name: Salmonella enterica


asm_submitter: CDC

organism_name: Shigella sonnei


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Pseudomonas aeruginosa


organism_name: Enterobacter asburiae


organism_name: Acinetobacter baumannii


organism_name: Enterobacter kobei


organism_name: Klebsiella pneumoniae


organism_name: Escherichia coli


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Shigella flexneri


organism_name: Enterobacter mori


asm_submitter: FDA


asm_submitter: COFEPRIS-CCAYAC


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


asm_submitter: Public Health England

organism_name: Yersinia enterocolitica


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


asm_submitter: University of Waterloo

excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Pseudomonadota bacterium


organism_name: Salmonella enterica subsp. enterica


asm_submitter: Taizhou University

assembly_level: Complete Genome


asm_submitter: University of Plovdiv

organism_name: Bacillus paranthracis


asm_submitter: Leibniz-Institute DSMZ - German Collection of Microorganisms and Cell Cultures

organism_name: Pendulispora rubella


organism_name: Pendulispora brunnea


organism_name: Pendulispora albinea


organism_name: Salmonella enterica


organism_name: Shigella sonnei


organism_name: Acinetobacter baumannii


organism_name: Escherichia coli


organism_name: Shigella flexneri


asm_submitter: Health Protection Agency


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Campylobacter jejuni


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Escherichia coli O15:H10


asm_submitter: NJ DOH Public Health Laboratories microbial pathogen submission group

organism_name: Vibrio parahaemolyticus


organism_name: Citrobacter freundii


asm_submitter: National Center for Biotechnology Information

organism_name: Neisseria meningitidis


isolate: NM


organism_name: Listeria monocytogenes


isolate: INPUT


excluded_from_refseq: contaminated; from large multi-isolate project


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Klebsiella variicola


asm_submitter: Chinese Academy of Sciences

organism_name: Methylomonas sp. WH-1


organism_name: Bacillus sp. WH-2


organism_name: Salmonella enterica


asm_submitter: FDA/CFSAN


organism_name: Pseudomonas aeruginosa


asm_submitter: CSIR-Institute of Microbial Technology

organism_name: Acinetobacter baumannii


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

isolate: ISOLATE

organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Brandenburg


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


asm_submitter: CDC

organism_name: Shigella flexneri


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


asm_submitter: FDA Center for Food Safety and Applied Nutrition


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Proteus mirabilis


organism_name: Vibrio navarrensis


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Shigella sonnei


asm_submitter: GEOMAR Helmholtz Centre for Ocean Research

excluded_from_refseq: many frameshifted proteins

organism_name: Vibrio sp. PP-XX7


infraspecific_name: strain=PP-He15 brown

organism_name: Shewanella sp. PP-He15 brown


excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Shewanella sp. PP-Sp27a-2


organism_name: Vibrio sp. SA48


organism_name: Vibrio sp. M60_M70


organism_name: Vibrio sp. M60_M31a


organism_name: Salmonella enterica


organism_name: Paraglaciecola sp. Hal342


organism_name: Photobacterium sp. Hal280


organism_name: Enterovibrio sp. Hal110


organism_name: Campylobacter coli


organism_name: Pseudoalteromonas sp. Hal273


organism_name: Pseudoalteromonas sp. Hal099


organism_name: Pseudoalteromonas sp. Hal056


organism_name: Vibrio sp. Hal054


organism_name: Pseudoalteromonas sp. Hal040


infraspecific_name: strain=DSM 19607

organism_name: Vibrio coralliilyticus


organism_name: Pseudoalteromonas sp. B193


organism_name: Pseudoalteromonas sp. B160


organism_name: Pseudoalteromonas sp. B137


organism_name: Pseudoalteromonas sp. B129b


organism_name: Pseudoalteromonas sp. B131b


organism_name: Pseudoalteromonas sp. B62


organism_name: Pseudoalteromonas sp. B28


asm_submitter: University of Florence

organism_name: Mesorhizobium sp. ISC11


organism_name: Mesorhizobium sp. ISC15


asm_submitter: Pirogov Russian National Research Medical University

infraspecific_name: strain=ATCC 27853-116

organism_name: Pseudomonas aeruginosa


infraspecific_name: strain=ATCC 27853-114


infraspecific_name: strain=ATCC 27853-109


infraspecific_name: strain=ATCC 27853-110


infraspecific_name: strain=ATCC 27853-113


infraspecific_name: strain=ATCC 27853-108


infraspecific_name: strain=ATCC 27853-107


infraspecific_name: strain=ATCC 27853-106


infraspecific_name: strain=ATCC 27853-105


infraspecific_name: strain=ATCC 27853-104


infraspecific_name: strain=ATCC 27853-101


infraspecific_name: strain=ATCC 27853-99


infraspecific_name: strain=ATCC 27853-96


infraspecific_name: strain=ATCC 27853-94


infraspecific_name: strain=ATCC 27853-95


infraspecific_name: strain=ATCC 27853-85


infraspecific_name: strain=ATCC 27853-82


infraspecific_name: strain=ATCC 27853-84


infraspecific_name: strain=ATCC 27853-72


infraspecific_name: strain=ATCC 27853-73


infraspecific_name: strain=ATCC 27853-64


infraspecific_name: strain=ATCC 27853-71


infraspecific_name: strain=ATCC 27853-63


infraspecific_name: strain=ATCC 27853-65


infraspecific_name: strain=ATCC 27853-62


infraspecific_name: strain=ATCC 27853-57


infraspecific_name: strain=ATCC 27853-56


infraspecific_name: strain=ATCC 27853-53


infraspecific_name: strain=ATCC 27853-55


infraspecific_name: strain=ATCC 27853-54


infraspecific_name: strain=ATCC 27853-51


infraspecific_name: strain=ATCC 27853-52


infraspecific_name: strain=ATCC 27853-50


infraspecific_name: strain=ATCC 27853-37


infraspecific_name: strain=ATCC 27853-34


infraspecific_name: strain=ATCC 27853-36


infraspecific_name: strain=ATCC 27853-35


infraspecific_name: strain=ATCC 27853-33


infraspecific_name: strain=ATCC 27853-26


infraspecific_name: strain=ATCC 27853-25


infraspecific_name: strain=ATCC 27853-23


infraspecific_name: strain=ATCC 27853-24


infraspecific_name: strain=ATCC 27853-18


infraspecific_name: strain=ATCC 27853-17


infraspecific_name: strain=ATCC 27853-16


infraspecific_name: strain=ATCC 27853-10


infraspecific_name: strain=ATCC 27853-7


infraspecific_name: strain=ATCC 27853-9


infraspecific_name: strain=ATCC 27853-8


infraspecific_name: strain=ATCC 27853-6


organism_name: Salmonella enterica


infraspecific_name: strain=ATCC 27853-5


infraspecific_name: strain=ATCC 27853-1


infraspecific_name: strain=ATCC 27853-3


asm_submitter: Xenorhabdus project-Indiana University

infraspecific_name: strain=texanum MC_15

organism_name: Xenorhabdus bovienii


infraspecific_name: strain=ATCC 27853-2


asm_submitter: SENASICA

organism_name: Escherichia coli O154:H16


organism_name: Escherichia coli O2:H4


asm_submitter: National Institute of Food and Drug Safety Evaluation

organism_name: Vibrio parahaemolyticus


infraspecific_name: strain=texanum LD_27B


organism_name: Escherichia coli O15:H11


asm_submitter: Hebei Research Institute of Microbiology Co., Ltd.

organism_name: Priestia megaterium


excluded_from_refseq: unverified source organism

organism_name: Serratia marcescens


excluded_from_refseq: annotation fails completeness check

organism_name: Priestia aryabhattai


organism_name: Escherichia coli H10


asm_submitter: University of Dhaka

organism_name: Klebsiella pneumoniae


organism_name: Escherichia coli O51:H38


organism_name: Shigella sonnei


organism_name: Shigella flexneri


asm_submitter: University of the Phillipines Diliman

organism_name: Limosilactobacillus fermentum


asm_submitter: Univerisity of Pretoria

infraspecific_name: strain=SA 48 500

organism_name: Staphylococcus aureus


infraspecific_name: strain=SA 43 500


infraspecific_name: strain=NI 01 500


infraspecific_name: strain=NI 06 500


asm_submitter: Green Nitrogen Biotech

organism_name: Bacillus subtilis


infraspecific_name: strain=NI 05 500


asm_submitter: Huzhou CDC


asm_submitter: University of Western Ontario

organism_name: Streptococcus pyogenes


asm_submitter: South China Agricultural University

organism_name: Salmonella enterica


asm_submitter: ANSES


organism_name: Escherichia coli


organism_name: Citrobacter freundii


infraspecific_name: strain=ATCC 27853-0

organism_name: Pseudomonas aeruginosa


asm_submitter: Yunnan Institute of Microbiology

infraspecific_name: strain=YIM B09110

organism_name: Paenibacillus sp. YIM B09110


asm_submitter: City University of Hong Kong


organism_name: Morganella morganii


organism_name: Proteus terrae


excluded_from_refseq: unverified source organism; annotation fails completeness check

organism_name: Proteus mirabilis


organism_name: Enterobacter kobei


organism_name: Proteus terrae subsp. cibarius


organism_name: Klebsiella pneumoniae


asm_submitter: Federal University of Rio de Janeiro

organism_name: Vibrio fluvialis


organism_name: Vibrio alginolyticus


asm_submitter: University of the Philippines

organism_name: Serratia nematodiphila


organism_name: Bacillus anthracis


organism_name: Vibrio parahaemolyticus


organism_name: Limosilactobacillus fermentum


asm_submitter: USDA ARS

organism_name: Leuconostoc pseudomesenteroides


asm_submitter: Beijing University of Chemical Technology

organism_name: Staphylococcus aureus


asm_submitter: Sikkim University

infraspecific_name: strain=tamang

organism_name: Bacillus subtilis


asm_submitter: Chinese People's Liberation Army Center for Disease Control and Prevention

organism_name: Acinetobacter baumannii


asm_submitter: Universidad Antonio Narino

organism_name: Pseudomonas aeruginosa


organism_name: Pseudomonas sp. 3B


organism_name: Pseudomonas protegens


organism_name: Escherichia coli


organism_name: Klebsiella aerogenes


organism_name: Serratia bockelmannii


organism_name: Klebsiella pneumoniae


organism_name: Aeromonas veronii


organism_name: Aeromonas dhakensis


organism_name: Acinetobacter pittii


organism_name: Klebsiella africana


organism_name: Pseudomonas putida


organism_name: Proteus terrae


organism_name: Enterococcus gallinarum


organism_name: Enterococcus faecalis


excluded_from_refseq: fragmented assembly


asm_submitter: Mahatma Gandhi University, Kottayam

organism_name: Elizabethkingia anophelis


organism_name: Acinetobacter baumannii


asm_submitter: SECOND INSTITUTE OF OCEANOGRAPHY, MNR

infraspecific_name: strain=LMG 28596

organism_name: Sphingomonas aquatica


asm_submitter: Peking University

organism_name: Prescottella equi


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


asm_submitter: Public Health England

organism_name: Yersinia enterocolitica


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


asm_submitter: FDA/CFSAN

organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: Centers for Disease Control and Prevention


asm_submitter: CDC

organism_name: Escherichia coli


organism_name: Escherichia coli O13/O135:H4


organism_name: Salmonella enterica


organism_name: Escherichia coli O78:H4


organism_name: Shigella flexneri


asm_submitter: SENASICA

organism_name: Escherichia coli H12


organism_name: Escherichia coli H10


organism_name: Escherichia coli O115:H4


organism_name: Escherichia coli O157:H51


organism_name: Escherichia coli O7:H18


organism_name: Escherichia coli O123/186:H40


organism_name: Escherichia coli O3:H7


organism_name: Escherichia coli O128ac:H26


organism_name: Escherichia coli O153:H34


organism_name: Escherichia coli O117:H42


organism_name: Yersinia enterocolitica


asm_submitter: Health Protection Agency


organism_name: Escherichia coli O134/46/8:H19


organism_name: Escherichia coli O83:H42


organism_name: Escherichia coli O86:H12


organism_name: Escherichia coli O113:H32


organism_name: Escherichia coli O132:H21


organism_name: Escherichia coli O38:H39


organism_name: Escherichia coli O45:H12


organism_name: Escherichia coli O8:H7


organism_name: Escherichia coli O53:H51


organism_name: Escherichia coli O8:H34


organism_name: Escherichia coli O17/77/44:H18


organism_name: Escherichia coli O166:H45


organism_name: Escherichia coli O18/18ac:H49


organism_name: Escherichia coli O16:H32


organism_name: Escherichia coli H7


organism_name: Escherichia coli O9a/9:H30


organism_name: Escherichia coli O157:H45


organism_name: Escherichia coli O123/186:H25


organism_name: Escherichia coli H23


organism_name: Escherichia coli O49:H6


organism_name: Escherichia coli O79:H21


organism_name: Escherichia coli O51:H21


organism_name: Escherichia coli O8:H19


organism_name: Escherichia coli O180:H48


organism_name: Escherichia coli O176:H40


organism_name: Escherichia coli H26


organism_name: Escherichia coli O15:H6


organism_name: Escherichia coli O88:H21


organism_name: Escherichia coli O159:H21


organism_name: Escherichia coli O111:H5


organism_name: Escherichia coli O11:H11


organism_name: Escherichia coli O7:H15


organism_name: Escherichia coli O36:H51


organism_name: Escherichia coli O132:H11


organism_name: Escherichia coli O16:H48


organism_name: Escherichia coli O109:H21


organism_name: Escherichia coli H7


organism_name: Escherichia coli O8:H49


organism_name: Escherichia coli H46


organism_name: Escherichia coli O81:H39


organism_name: Salmonella enterica


organism_name: Shigella boydii


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Lubbock


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. diarizonae


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: University of California, Irvine


asm_submitter: University of Pretoria

organism_name: Mesorhizobium argentiipisi (SeqCode)


organism_name: Mesorhizobium salmacidum (SeqCode)


organism_name: Mesorhizobium sp. Cs1299R1N3


asm_submitter: National Center for Biotechnology Information

infraspecific_name: strain=W

organism_name: Neisseria meningitidis


organism_name: Mesorhizobium sp. Cs1299R1N1


organism_name: Mesorhizobium sp. Cs1321R2N1


infraspecific_name: strain=A


organism_name: Salmonella enterica


organism_name: Shigella flexneri


organism_name: Escherichia coli


asm_submitter: University of Sorocaba (UNISO)

excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Neoluteolibacter luteus


organism_name: bacterium


excluded_from_refseq: derived from metagenome

organism_name: Hydrogenophaga borbori


organism_name: Gemmatimonadales bacterium


organism_name: Burkholderiaceae bacterium


organism_name: Selenomonadaceae bacterium


organism_name: Crocinitomicaceae bacterium


organism_name: Phycisphaerae bacterium


organism_name: Phenylobacterium sp.


organism_name: Shinella sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Neisseria meningitidis


organism_name: Chthoniobacteraceae bacterium


organism_name: Paludisphaera sp.


organism_name: Moraxellaceae bacterium


organism_name: Bryobacteraceae bacterium


organism_name: Gemmatimonas aurantiaca


organism_name: Fimbriimonadaceae bacterium


organism_name: Paracoccaceae bacterium


organism_name: Edaphocola sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Stenotrophomonas nitritireducens


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Burkholderiaceae bacterium


organism_name: Verrucomicrobiales bacterium


organism_name: Luteimonas aestuarii


organism_name: Haloferula sp.


organism_name: Parapedobacter sp.


organism_name: Leucobacter sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Neisseria meningitidis


organism_name: Rhodovastum atsumiense


organism_name: Pedobacter sp.


organism_name: Sphingomonas sanxanigenens


organism_name: Chiayiivirga flava


organism_name: Flavipsychrobacter sp.


organism_name: Chitinophagaceae bacterium


organism_name: Agriterribacter sp.


organism_name: Sphingopyxis granuli


organism_name: Chthoniobacteraceae bacterium


asm_submitter: National Research Center "Kurchatov Institute"

organism_name: Helcococcus ovis


organism_name: Spirosomataceae bacterium


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Bacteroides sp.


organism_name: Streptococcus dysgalactiae


organism_name: Porphyromonadaceae bacterium


organism_name: Salmonella enterica


organism_name: Campylobacter jejuni


organism_name: Neisseria meningitidis


organism_name: Shigella flexneri


organism_name: Escherichia coli


organism_name: Listeria monocytogenes


asm_submitter: University of Minho

organism_name: Staphylococcus epidermidis


organism_name: Staphylococcus aureus


organism_name: Staphylococcus capitis


asm_submitter: School of Medicine

organism_name: Pseudomonas aeruginosa


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Enterobacter hormaechei


organism_name: Acinetobacter baumannii


organism_name: Staphylococcus succinus


organism_name: Staphylococcus warneri


asm_submitter: City University of Hong Kong

organism_name: Vibrio cholerae


organism_name: Vibrio parahaemolyticus


organism_name: Vibrio alginolyticus


organism_name: Salmonella enterica


organism_name: Proteus terrae


organism_name: Proteus faecis


organism_name: Proteus terrae subsp. cibarius


organism_name: Escherichia coli


organism_name: Citrobacter portucalensis


organism_name: Citrobacter freundii


organism_name: Klebsiella pneumoniae


organism_name: Serratia marcescens


organism_name: Klebsiella sp. CLS1-2


excluded_from_refseq: contaminated

organism_name: Klebsiella sp. CLS1-1


asm_submitter: Equipe PHySE - HydroSciences Montpellier

organism_name: Pseudomonas aeruginosa


organism_name: Campylobacter jejuni


asm_submitter: Michigan State University

organism_name: Staphylococcus aureus


organism_name: Listeria monocytogenes


organism_name: Shigella flexneri


asm_submitter: Gateway Technical College

infraspecific_name: strain=gir

organism_name: Luteimonas sp. gir


asm_submitter: CSIR IICT

organism_name: Delftia tsuruhatensis


asm_submitter: Chiang Mai University


asm_submitter: CBG Instituto Politecnico Nacional

organism_name: Vibrio parahaemolyticus


asm_submitter: K. pneumoniae R4DF-E2


asm_submitter: Jiangsu University

assembly_level: Chromosome

group: archaea

organism_name: Haladaptatus sp. DJG-WS-42


asm_submitter: Shandong University (Qingdao Campus)

organism_name: Enterococcus faecalis


asm_submitter: Universiti Tunku Abdul Rahman

organism_name: Agrobacterium leguminum


asm_submitter: Korea Research Institute of Bioscience and Biotechnology (KRIBB)

organism_name: Janibacter alittae


asm_submitter: Istituto Zooprofilattico Sperimentale della Puglia e Basilicata

organism_name: Atlantibacter hermannii


organism_name: Enterobacter kobei


organism_name: Moellerella wisconsensis


organism_name: Escherichia coli


organism_name: Enterobacter hormaechei


organism_name: Citrobacter freundii


organism_name: Enterobacter asburiae


organism_name: Klebsiella pneumoniae


organism_name: Enterobacter cloacae


organism_name: Enterobacter ludwigii


organism_name: Klebsiella variicola


organism_name: Citrobacter braakii


organism_name: Kosakonia cowanii


organism_name: Phytobacter diazotrophicus


organism_name: Klebsiella ornithinolytica


organism_name: Enterobacter cancerogenus


organism_name: Salmonella enterica


organism_name: Atlantibacter hermannii


organism_name: Staphylococcus epidermidis


asm_submitter: Northwest A&F University

organism_name: Agromyces sp. CCNWLW213


asm_name: BSN5 Closure

asm_submitter: Wayne State University

organism_name: Staphylococcus aureus


asm_name: BSN88 Closure


asm_name: BSN92 Closure


asm_submitter: Agharkar Research Institute

infraspecific_name: strain=MCC 0222

organism_name: Lactococcus lactis subsp. lactis


asm_name: BSN117 Closure


asm_submitter: The First Affiliated Hospital, School of Medicine, Zhejiang University

organism_name: Bacillus paranthracis


asm_name: BSN83 Closure


asm_name: BSN81 Closure


asm_name: BSN71 Closure


organism_name: Escherichia coli


asm_submitter: Fujian Agriculture and Forestry University

organism_name: Oryzifoliimicrobium ureilyticum


asm_name: BSN38-MRSA1 Closure


asm_name: BSN38-MSSA1 Closure


asm_submitter: University of Wisconsin-Madison

organism_name: Serratia sp. MMO-24


organism_name: Serratia sp. MMO-28


asm_submitter: University of Waterloo

organism_name: Deltaproteobacteria bacterium


organism_name: Serratia sp. MMO-151


asm_submitter: Czech Academy of Science

organism_name: Caulobacteraceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Aliidongia sp.


organism_name: Rhizomicrobium sp.


organism_name: Limisphaerales bacterium


organism_name: Actinomycetota bacterium


organism_name: Candidatus Saccharimonadota bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Bacteroidota bacterium


organism_name: Chthoniobacter sp.


organism_name: Pseudomonadota bacterium


organism_name: Pseudolabrys sp.


organism_name: Ferruginibacter sp.


organism_name: Ignavibacteriota bacterium


organism_name: Steroidobacteraceae bacterium


organism_name: Occallatibacter sp.


organism_name: Pararobbsia sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Terricaulis sp.


organism_name: Methylocella sp.


organism_name: Limisphaerales bacterium


organism_name: Actinomycetota bacterium


organism_name: Asticcacaulis sp.


organism_name: Acidobacteriota bacterium


organism_name: Methylovirgula sp.


organism_name: Chitinophagaceae bacterium


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; many frameshifted proteins

organism_name: Sphingomonas sp.


organism_name: Bacteroidota bacterium


organism_name: Pseudomonadota bacterium


organism_name: Edaphobacter sp.


organism_name: Bauldia sp.


organism_name: Rhizomicrobium sp.


organism_name: bacterium


organism_name: Candidatus Doudnabacteria bacterium


organism_name: Moellerella wisconsensis


organism_name: Enterobacter bugandensis


organism_name: Klebsiella pneumoniae


organism_name: Escherichia coli


organism_name: Enterobacter hormaechei


organism_name: Enterobacter mori


organism_name: Enterobacter ludwigii


organism_name: Enterobacter kobei


organism_name: Atlantibacter hermannii


organism_name: Hyphomicrobium sp.


organism_name: Salmonella enterica


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; many frameshifted proteins

organism_name: Bradyrhizobium sp.


organism_name: Rhodospirillales bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Puia sp.


organism_name: Candidatus Moraniibacteriota bacterium


organism_name: Acetobacteraceae bacterium


organism_name: Caulobacteraceae bacterium


organism_name: Enterobacter asburiae


asm_submitter: Yunnan Agricultural University

organism_name: Bacillus subtilis


infraspecific_name: strain=MCC 0260

organism_name: Bacillus subtilis subsp. subtilis


asm_submitter: Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences

organism_name: Levilactobacillus brevis


asm_submitter: Fujian Academy of Agricultural Sciences

organism_name: Metabacillus rhizosphaerae


organism_name: Bacillus kandeliae


organism_name: Metabacillus sediminis


asm_submitter: Genomik Solidaritas Indonesia

organism_name: Escherichia coli


asm_submitter: Jiangsu University

organism_name: Haloplanus salilacus


asm_submitter: Center for Food Safety and Applied Nutrition

excluded_from_refseq: from large multi-isolate project

organism_name: Salmonella enterica


asm_submitter: Hunan Agricultural University


asm_submitter: Jiangsu Academy of Agricultural Sciences

organism_name: Leuconostoc mesenteroides


organism_name: Staphylococcus aureus


asm_submitter: National Institute of Agricultural Science

organism_name: Spirosoma sp. SC4-14


asm_submitter: Chungnam National University

organism_name: Streptomyces sp. TG1A-60


asm_submitter: The University of Western Australia

organism_name: Lwoffella lincolnii


asm_submitter: Faculty of Agriculture, Cairo University

excluded_from_refseq: genome length too large

infraspecific_name: strain=FACU

organism_name: Enterobacter cloacae


asm_submitter: Wayne State University


asm_submitter: Southwest Medical  University

infraspecific_name: strain=KLZT

organism_name: Klebsiella pneumoniae


asm_submitter: Marian University College

organism_name: Klebsiella michiganensis


organism_name: Pseudomonas aeruginosa


asm_submitter: KAUST


asm_submitter: US Food and Drug Administration


asm_submitter: West China Hospital, Sichuan University


asm_submitter: Beijing Forestry University

infraspecific_name: strain=KACC 17565

organism_name: Denitratimonas tolerans


asm_submitter: Czech Academy of Science

organism_name: Galbitalea sp.


asm_submitter: Istituto Zooprofilattico Sperimentale della Puglia e Basilicata


asm_submitter: Nanjing Agricultural University

organism_name: Chryseolinea sp. T2


organism_name: Prosthecomicrobium sp. N25


asm_submitter: Centro Multidisciplinario de Investigaciones Tecnologicas

organism_name: Agrobacterium sp. CMT1


asm_submitter: Northwest A&F University

organism_name: Stenotrophomonas sp. CCNWLW162


asm_submitter: Guangdong Academy of Sciences

organism_name: Sediminicola sp. 1XM1-17


organism_name: Phyllobacterium sp. CCNWLW183


organism_name: Kribbella sp. CCNWLW201


organism_name: Kribbella sp. CCNWLW197


organism_name: Paenarthrobacter sp. CCNWLW172


organism_name: Variovorax sp. CCNWLW186


organism_name: Pseudoxanthomonas sp. CCNWLW206


organism_name: Phyllobacterium sp. CCNWLW109


organism_name: Stenotrophomonas sp. CCNWLW57


organism_name: Pseudarthrobacter sp. CCNWLW207


organism_name: Pseudomonas sp. CCNWLW56


organism_name: Pseudarthrobacter sp. CCNWLW217


organism_name: Streptomyces sp. CCNWLW238


organism_name: Streptomyces sp. CCNWLW237


organism_name: Variovorax sp. CCNWLW225


organism_name: Streptomyces sp. CCNWLW230


organism_name: Variovorax sp. CCNWLW235


asm_submitter: Universidad Autonoma de Yucatan

organism_name: Pediococcus acidilactici


organism_name: Pseudarthrobacter sp. CCNWLW247


asm_submitter: Bursa Uludag University, Faculty of Veterinary Medicine

organism_name: Microbacterium istanbulense


organism_name: Microbacterium marmarense


organism_name: Microbacterium bandirmense


organism_name: Klebsiella pneumoniae


asm_submitter: CDC

organism_name: Escherichia coli


asm_submitter: Public Health England

organism_name: Yersinia enterocolitica


organism_name: Vibrio alginolyticus


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Newport


asm_submitter: Health Protection Agency


organism_name: Shigella sonnei


organism_name: Shigella flexneri


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


organism_name: Proteus mirabilis


organism_name: Citrobacter freundii


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter upsaliensis


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Acinetobacter baumannii


organism_name: Morganella morganii


organism_name: Pseudomonas aeruginosa


organism_name: Escherichia coli


organism_name: Shigella dysenteriae


organism_name: Shigella boydii


organism_name: Yersinia enterocolitica


organism_name: Vibrio cholerae


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


asm_submitter: FDA


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Shigella sonnei


organism_name: Klebsiella pneumoniae


organism_name: Salmonella enterica


asm_submitter: National Center for Biotechnology Information

isolate: WGS of M39110

organism_name: Neisseria meningitidis


isolate: WGS of M39144


isolate: WGS of M39146


isolate: WGS of M29350


isolate: WGS of M39147


isolate: WGS of M39112


isolate: WGS of M39151


isolate: WGS of M39148


isolate: WGS of M39193


isolate: WGS of M39196


isolate: WGS of M39224


isolate: WGS of M41176


isolate: WGS of M39525


asm_submitter: National Institute of Agricultural Sciences

organism_name: Erwinia amylovora


isolate: WGS of M36700


isolate: WGS of M36701


isolate: WGS of M37343


isolate: WGS of M41429


isolate: WGS of M41365


isolate: WGS of M41487


isolate: WGS of M41488


isolate: WGS of M41486


isolate: WGS of M41957


isolate: WGS of M41958


isolate: WGS of M41959


isolate: WGS of M42316


isolate: WGS of M42397


isolate: WGS of M42383


isolate: WGS of M42384


isolate: WGS of M42405


isolate: WGS of M42505


isolate: WGS of M42406


isolate: WGS of M44053


isolate: WGS of M44063


isolate: WGS of M44054


isolate: WGS of M44064


isolate: WGS of M44116


isolate: WGS of M44716


isolate: WGS of M44736


isolate: WGS of M44739


isolate: WGS of M44737


isolate: WGS of M37944


isolate: WGS of M37953


isolate: WGS of M37946


isolate: WGS of M37961


isolate: WGS of M38016


isolate: WGS of M36581


isolate: WGS of M38878


isolate: WGS of M46088


isolate: WGS of M46092


isolate: WGS of M46089


isolate: WGS of M46103


isolate: WGS of M46782


isolate: WGS of M37448


isolate: WGS of M37444


isolate: WGS of M37479


isolate: WGS of M37449


isolate: WGS of M37481


isolate: WGS of M38539


isolate: WGS of M38540


isolate: WGS of M38541


isolate: WGS of M29682


isolate: WGS of M39089


isolate: WGS of M38959


isolate: WGS of M39090


isolate: WGS of M39091


isolate: WGS of M39109


asm_submitter: Institute of Microbiology, Chinese Academy of Sciences

infraspecific_name: strain=CGMCC 1.1788

organism_name: Stenotrophomonas maltophilia


isolate: WGS of M37348


isolate: WGS of M37340


isolate: WGS of M37342


isolate: WGS of M37349


isolate: WGS of M41923


isolate: WGS of M43255


isolate: WGS of M43200


isolate: WGS of M43841


isolate: WGS of M43836


isolate: WGS of M43842


isolate: WGS of M43840


isolate: WGS of M43855


isolate: WGS of M43856


isolate: WGS of M40966


isolate: WGS of M37339


isolate: WGS of M41643


isolate: WGS of M44957


asm_submitter: University of Wisconsin-Madison

organism_name: Sphingomonas sp. MMO-176


isolate: WGS of M43857


isolate: WGS of M43859


isolate: WGS of M43850


isolate: WGS of M43852


isolate: WGS of M43851


isolate: WGS of M37345


isolate: WGS of M43861


isolate: WGS of M44958


isolate: WGS of M37415


isolate: WGS of M44959


isolate: WGS of M44968


isolate: WGS of M44967


isolate: WGS of M44965


isolate: WGS of M45192


isolate: WGS of M45177


isolate: WGS of M46057


isolate: WGS of M46084


isolate: WGS of M46083


isolate: WGS of M46085


isolate: WGS of M38511


isolate: WGS of M38512


isolate: WGS of M46086


isolate: WGS of M38514


isolate: WGS of M38517


isolate: WGS of M38518


isolate: WGS of M38521


isolate: WGS of M38524


isolate: WGS of M38525


isolate: WGS of M38526


isolate: WGS of M38527


asm_submitter: School of Medicine

organism_name: Pseudomonas aeruginosa


isolate: clinical


isolate: clinical isolate


asm_submitter: Southwest Medical University

organism_name: Acinetobacter baumannii


isolate: WGS of M44742


isolate: WGS of M44900


isolate: WGS of M44899


isolate: WGS of M44740


isolate: WGS of M44837


isolate: WGS of M37927


isolate: WGS of M37928


isolate: WGS of M44913


isolate: WGS of M37940


isolate: WGS of M37934


isolate: WGS of M37951


isolate: WGS of M37943


isolate: WGS of M42036


isolate: WGS of M42034


isolate: WGS of M42025


isolate: WGS of M42024


isolate: WGS of M42020


isolate: WGS of M42021


isolate: WGS of M42023


isolate: WGS of M42022


isolate: WGS of M42019


isolate: WGS of M42017


isolate: WGS of M42008


isolate: WGS of M42016


isolate: WGS of M42033


isolate: WGS of M42015


isolate: WGS of M42007


isolate: WGS of M42011


isolate: WGS of M42032


isolate: WGS of M37591


isolate: WGS of M38799


isolate: WGS of M38260


isolate: WGS of M42031


isolate: WGS of M42030


isolate: WGS of M42027


isolate: WGS of M42029


isolate: WGS of M42028


isolate: WGS of M42026


asm_submitter: Agriculture and Agri-Food Canada

organism_name: Bradyrhizobium septentrionale


asm_submitter: School of Medicine, Xiamen University

organism_name: Streptococcus agalactiae


organism_name: Bradyrhizobium sp. 27S5


asm_submitter: Sichuan Agricultural University

organism_name: Enterobacter hormaechei


asm_name: BSN149 Contigs

asm_submitter: Wayne State University

organism_name: Staphylococcus aureus


infraspecific_name: strain=MC58 spr:LacZ


infraspecific_name: strain=MC58 ?siaD ?mutS PorA-ve


asm_name: BSN102 contigs


asm_submitter: EEA INTA Marcos Juarez

infraspecific_name: strain=ARGTr 1-1

organism_name: Pantoea ananatis


asm_name: BSN99 Contigs


asm_name: BSN102-2 Contigs


asm_name: BSN133 Contigs


asm_submitter: Charles University, Faculty of Medicine in Pilsen


asm_submitter: The University of Texas Health Sciences Center

organism_name: Klebsiella quasipneumoniae


organism_name: Escherichia coli


asm_submitter: Health Protection Agency

organism_name: Shigella sonnei


organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


isolate: WGS of M37935

organism_name: Neisseria meningitidis


organism_name: Serratia marcescens


isolate: clinical


asm_submitter: Helmholtz Centre for Infection Research

organism_name: Duodenibacillus massiliensis


organism_name: Parabacteroides merdae


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Bacteroides finegoldii


organism_name: Sutterella wadsworthensis


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Bacteroides xylanisolvens


organism_name: Phocaeicola coprocola


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: bacterium


organism_name: Agathobacter rectalis


organism_name: Eubacteriales bacterium


organism_name: Parabacteroides distasonis


organism_name: Phocaeicola plebeius


organism_name: Phascolarctobacterium faecium


organism_name: Bacteroides stercoris


organism_name: Faecalibacterium prausnitzii


organism_name: Prevotella sp.


organism_name: Paraprevotella clara


organism_name: Bifidobacterium adolescentis


organism_name: Phocaeicola coprophilus


organism_name: Roseburia sp.


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Enterocloster sp.


organism_name: Clostridium sp.


organism_name: Vescimonas sp.


organism_name: Phocaeicola vulgatus


organism_name: Faecalibacterium sp.


organism_name: Dysosmobacter sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; genome length too small


organism_name: Gemmiger formicilis


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; genome length too small


organism_name: Lachnospiraceae bacterium


organism_name: bacterium


organism_name: Bacteroides uniformis


organism_name: Phocaeicola plebeius


organism_name: Roseburia faecis


organism_name: Prevotellamassilia timonensis


organism_name: Segatella sp.


organism_name: Prevotella pectinovora


organism_name: Phascolarctobacterium succinatutens


organism_name: Ruminococcus sp.


organism_name: Sutterella wadsworthensis


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genome length too small

organism_name: Ruminococcus bromii


organism_name: Prevotella sp.


organism_name: Klebsiella variicola


organism_name: Blautia wexlerae


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Enterocloster sp.


excluded_from_refseq: derived from metagenome

organism_name: Hafnia alvei


organism_name: Eubacterium sp.


organism_name: Agathobacter rectalis


isolate: WGS of M14298

organism_name: Neisseria meningitidis


organism_name: Eubacteriales bacterium


organism_name: Bifidobacterium adolescentis


organism_name: Oscillospiraceae bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Parabacteroides sp.


organism_name: Bacteroides fragilis


organism_name: Roseburia hominis


organism_name: Desulfovibrio piger


organism_name: Allocoprococcus comes


organism_name: Lachnospira sp.


organism_name: Phascolarctobacterium sp.


organism_name: Holdemanella sp.


organism_name: Dysosmobacter welbionis


organism_name: Bacteroides thetaiotaomicron


organism_name: Roseburia faecis


organism_name: Lachnospiraceae bacterium


organism_name: Fusicatenibacter saccharivorans


organism_name: Succinivibrio sp.


organism_name: Prevotella sp.


organism_name: [Lactobacillus] rogosae


organism_name: Segatella copri


organism_name: bacterium


organism_name: Duodenibacillus sp.


organism_name: Mitsuokella jalaludinii


organism_name: Prevotellamassilia timonensis


organism_name: Dialister sp.


organism_name: Phascolarctobacterium succinatutens


organism_name: Segatella sp.


organism_name: Escherichia coli


organism_name: Clostridium sp.


organism_name: Acidaminococcus intestini


organism_name: Megasphaera sp.


organism_name: Sutterella wadsworthensis


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined


organism_name: Segatella hominis


organism_name: Desulfovibrio sp.


organism_name: Succinivibrio sp.


organism_name: Prevotella sp.


organism_name: Anaerovibrio sp.


organism_name: bacterium


organism_name: Holdemanella biformis


organism_name: Paraprevotella clara


organism_name: Oscillospiraceae bacterium


organism_name: Olsenella sp.


organism_name: Duodenibacillus sp.


organism_name: Faecalibacterium sp.


organism_name: Alistipes sp.


organism_name: Prevotellamassilia sp.


organism_name: Phocaeicola sp.


organism_name: Alistipes dispar


organism_name: Prevotellamassilia timonensis


organism_name: Phocaeicola vulgatus


organism_name: Acidaminococcus timonensis


organism_name: Escherichia coli


organism_name: Phascolarctobacterium succinatutens


organism_name: Vescimonas sp.


organism_name: Parabacteroides sp.


organism_name: Evtepia sp.


organism_name: Dysosmobacter sp.


organism_name: Roseburia inulinivorans


organism_name: Neisseria meningitidis


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: bacterium


organism_name: Dorea longicatena


organism_name: Ruminococcus sp.


organism_name: Slackia isoflavoniconvertens


organism_name: Oribacterium sp.


organism_name: Gemmiger formicilis


organism_name: Megasphaera sp.


organism_name: Ellagibacter isourolithinifaciens


organism_name: Angelakisella sp.


organism_name: Ruthenibacterium lactatiformans


excluded_from_refseq: contaminated; unverified source organism; derived from metagenome

organism_name: Butyricicoccus sp.


organism_name: Faecalibacterium sp.


organism_name: Allocoprococcus comes


organism_name: Olsenella sp.


organism_name: Senegalimassilia faecalis


organism_name: [Eubacterium] siraeum


organism_name: Fusicatenibacter saccharivorans


organism_name: bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Prevotella sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Alistipes communis


organism_name: Succinivibrio sp.


organism_name: Bifidobacterium longum


organism_name: Coprococcus sp.


organism_name: Dysosmobacter sp.


organism_name: Negativibacillus sp.


organism_name: Brachyspira sp.


organism_name: Lachnospiraceae bacterium


organism_name: Ruminococcus bromii


organism_name: Gemmiger sp.


organism_name: Alistipes dispar


organism_name: Blautia sp.


organism_name: Bacteroides uniformis


organism_name: Mediterraneibacter faecis


organism_name: Gemmiger qucibialis


organism_name: bacterium


organism_name: Parolsenella catena


organism_name: Catenibacterium sp.


organism_name: Duodenibacillus sp.


organism_name: Faecalibacterium sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Olsenella sp.


excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

infraspecific_name: strain=ARGTr 7-1

organism_name: Xanthomonas translucens pv. undulosa


organism_name: Phascolarctobacterium succinatutens


organism_name: archaeon


organism_name: Neisseria meningitidis


organism_name: Lachnospira eligens


organism_name: Blautia wexlerae


organism_name: Prevotellamassilia sp.


organism_name: Dialister sp.


organism_name: Holdemanella sp.


organism_name: Agathobacter rectalis


organism_name: Holdemanella biformis


organism_name: Bifidobacterium adolescentis


organism_name: bacterium


organism_name: Sodaliphilus sp.


organism_name: Desulfovibrio sp.


organism_name: Segatella copri


organism_name: Gemmiger formicilis


organism_name: [Lactobacillus] rogosae


organism_name: Prevotella sp.


organism_name: Olsenella sp.


organism_name: Gemmiger qucibialis


organism_name: Paraprevotella clara


organism_name: Segatella hominis


organism_name: Parabacteroides distasonis


organism_name: Lachnospira eligens


organism_name: Bacteroides stercoris


organism_name: Faecalibacterium prausnitzii


organism_name: Segatella sp.


organism_name: Faecalibacterium sp.


organism_name: Succinivibrio sp.


organism_name: Lachnospiraceae bacterium


organism_name: Allocoprococcus comes


organism_name: Parabacteroides merdae


organism_name: Collinsella aerofaciens


organism_name: Acidaminococcus timonensis


organism_name: bacterium


organism_name: Lachnospira sp.


organism_name: Phascolarctobacterium succinatutens


organism_name: Clostridium sp.


organism_name: Streptococcus thermophilus


organism_name: Sutterella wadsworthensis


organism_name: Roseburia inulinivorans


organism_name: Phocaeicola vulgatus


organism_name: Agathobacter rectalis


organism_name: Duodenibacillus sp.


organism_name: Roseburia intestinalis


organism_name: Coprococcus sp.


organism_name: Enterocloster sp.


organism_name: Succinivibrio sp.


organism_name: Dialister sp.


organism_name: Prevotella sp.


infraspecific_name: strain=ARGTr 9-1

organism_name: Pseudomonas syringae pv. atrofaciens


organism_name: bacterium


organism_name: Neisseria meningitidis


organism_name: Bacteroides thetaiotaomicron


organism_name: Eshraghiella crossota


organism_name: Duodenibacillus massiliensis


organism_name: Desulfovibrio sp.


organism_name: Catenibacterium sp.


organism_name: Congzhengia sp.


organism_name: Oribacterium sp.


organism_name: Mitsuokella jalaludinii


organism_name: Faecalibacterium sp.


organism_name: Eisenbergiella tayi


organism_name: Allocoprococcus comes


organism_name: Prevotellamassilia sp.


organism_name: Lachnospiraceae bacterium


organism_name: Ruminococcus sp.


organism_name: Phocaeicola dorei


organism_name: bacterium


organism_name: Angelakisella sp.


organism_name: archaeon


organism_name: Pseudoruminococcus massiliensis


organism_name: Bifidobacterium adolescentis


organism_name: Shigella flexneri


organism_name: Megasphaera sp.


organism_name: Coprococcus sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Agathobacter rectalis


organism_name: Bacteroides uniformis


organism_name: Segatella hominis


organism_name: Butyrivibrio sp.


organism_name: Ellagibacter isourolithinifaciens


organism_name: Neisseria meningitidis


isolate: WGS of M17958


isolate: WGS of M18014


organism_name: Methanobrevibacter smithii


isolate: WGS of M18044


isolate: WGS of M18017


organism_name: Victivallis sp.


infraspecific_name: strain=ARGTr 5-2

organism_name: Curtobacterium flaccumfaciens pv. flaccumfaciens


organism_name: Ruthenibacterium lactatiformans


organism_name: bacterium


organism_name: Prevotella sp.


organism_name: Olsenella sp.


organism_name: Roseburia faecis


organism_name: Akkermansia muciniphila


organism_name: Duodenibacillus sp.


organism_name: Eubacteriales bacterium


organism_name: Collinsella sp.


organism_name: Bacteroides caccae


organism_name: Allocoprococcus comes


organism_name: Bifidobacterium longum


organism_name: Dialister sp.


organism_name: Bacteroides uniformis


organism_name: Faecalibacterium prausnitzii


organism_name: Phocaeicola sp.


organism_name: Segatella copri


organism_name: Dakarella massiliensis


organism_name: bacterium


organism_name: Parabacteroides distasonis


organism_name: Mediterraneibacter gnavus


organism_name: Bifidobacterium adolescentis


organism_name: Prevotella sp.


organism_name: Angelakisella sp.


organism_name: Akkermansia muciniphila


organism_name: Desulfovibrio sp.


organism_name: Negativibacillus sp.


organism_name: Eubacterium sp.


organism_name: Methanobrevibacter smithii


organism_name: Parolsenella catena


organism_name: Gemmiger sp.


organism_name: Parabacteroides sp.


isolate: WGS of M18013

organism_name: Neisseria meningitidis


isolate: WGS of M18045


isolate: WGS of M18640


organism_name: Ruminiclostridium sp.


asm_submitter: Huashan Hospital

organism_name: Enterococcus faecalis


organism_name: bacterium


organism_name: Prevotellamassilia sp.


organism_name: Phocaeicola vulgatus


organism_name: Succinivibrio sp.


organism_name: Dysosmobacter sp.


organism_name: Anaerovibrio sp.


organism_name: Bacteroides thetaiotaomicron


organism_name: Collinsella sp.


organism_name: Mailhella sp.


organism_name: Prevotella sp.


organism_name: Desulfovibrio sp.


organism_name: Phocaeicola sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Bacteroides ovatus


organism_name: Parabacteroides merdae


organism_name: Duodenibacillus massiliensis


organism_name: Vescimonas sp.


organism_name: Eshraghiella crossota


organism_name: Phascolarctobacterium succinatutens


organism_name: Brachyspira aalborgi


organism_name: bacterium


organism_name: Faecalibacterium sp.


organism_name: Prevotellamassilia sp.


organism_name: Hominifimenecus sp.


organism_name: Coprococcus sp.


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Allocoprococcus comes


organism_name: Prevotella sp.


organism_name: Lachnospiraceae bacterium


organism_name: Bacteroides sp.


organism_name: Desulfovibrio sp.


organism_name: Acidaminococcus intestini


organism_name: Dysosmobacter welbionis


organism_name: Ruminococcus sp.


organism_name: Roseburia inulinivorans


organism_name: Fusicatenibacter saccharivorans


organism_name: Alistipes sp.


organism_name: bacterium


organism_name: Segatella sp.


organism_name: Campylobacter sp.


organism_name: Succinivibrio sp.


organism_name: Gemmiger formicilis


organism_name: Agathobaculum butyriciproducens


organism_name: Clostridium sp.


organism_name: Barnesiella intestinihominis


organism_name: Agathobacter rectalis


asm_submitter: National Center for Biotechnology Information

isolate: WGS of M18731

organism_name: Neisseria meningitidis


isolate: WGS of M18709


isolate: WGS of M18711


organism_name: Oscillospiraceae bacterium


organism_name: Alistipes onderdonkii


organism_name: Roseburia faecis


organism_name: Mitsuokella jalaludinii


isolate: WGS of M18714


organism_name: Parabacteroides distasonis


isolate: WGS of M19314


isolate: WGS of M18816


isolate: WGS of M21134


isolate: WGS of M19315


isolate: WGS of M07621


isolate: WGS of M07622


isolate: WGS of M07624


organism_name: Prevotella sp.


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Odoribacter splanchnicus


isolate: WGS of M07655


organism_name: bacterium


organism_name: Bacteroides eggerthii


isolate: WGS of M07639


organism_name: Streptococcus agalactiae


isolate: WGS of M07676


isolate: WGS of M06779


isolate: WGS of M07992


isolate: WGS of M07994


organism_name: Phocaeicola vulgatus


organism_name: Waltera sp.


isolate: WGS of M08079


isolate: WGS of M08080


isolate: WGS of M08124


organism_name: Paraprevotella xylaniphila


isolate: WGS of M06968


isolate: WGS of M08117


organism_name: Dysosmobacter sp.


isolate: WGS of M08129


isolate: WGS of M08130


isolate: WGS of M08152


organism_name: Lachnospira eligens


organism_name: Vescimonas sp.


isolate: WGS of M08367

organism_name: Neisseria meningitidis


isolate: WGS of M08320


isolate: WGS of M09173


isolate: WGS of M08255


isolate: WGS of M07043


organism_name: Hominilimicola sp.


isolate: WGS of M09181


isolate: WGS of M09318


isolate: WGS of M09331


organism_name: Lawsonibacter sp.


organism_name: Bacteroides fragilis


isolate: WGS of M09383


organism_name: Faecalibacterium prausnitzii


organism_name: Agathobacter rectalis


isolate: WGS of M09345


isolate: WGS of M09399


isolate: WGS of M09385


isolate: WGS of M09401


isolate: WGS of M07099


organism_name: Alistipes shahii


organism_name: Bacteroides caccae


organism_name: Gallintestinimicrobium sp.


organism_name: Alistipes onderdonkii


isolate: WGS of M09660


organism_name: Akkermansia muciniphila


organism_name: Roseburia intestinalis


organism_name: Parasutterella excrementihominis


organism_name: Alistipes putredinis


organism_name: Porcipelethomonas sp.


organism_name: bacterium


organism_name: Bacteroides cellulosilyticus


organism_name: Phascolarctobacterium succinatutens


organism_name: Bacteroides uniformis


organism_name: Bacteroides salyersiae


organism_name: Anaerotignum faecicola


organism_name: Roseburia hominis


excluded_from_refseq: contaminated; derived from metagenome; genome length too small

organism_name: Ruminococcus bromii


organism_name: Bacteroides stercoris


organism_name: Clostridium sp.


organism_name: Desulfovibrio sp.


organism_name: [Ruminococcus] lactaris


organism_name: Flavonifractor plautii


organism_name: Alitiscatomonas sp.


organism_name: Gemmiger qucibialis


organism_name: Faecalibacterium prausnitzii


organism_name: Agathobacter rectalis


organism_name: bacterium


organism_name: Prevotella sp.


organism_name: Treponema sp.


organism_name: Phascolarctobacterium succinatutens


organism_name: Bifidobacterium adolescentis


excluded_from_refseq: derived from metagenome; genome length too small; genus undefined

organism_name: [Eubacterium] siraeum


organism_name: Sodaliphilus sp.


organism_name: Streptococcus agalactiae


organism_name: Dysosmobacter sp.


organism_name: Ruminococcus bromii


organism_name: Phocaeicola dorei


organism_name: Dialister invisus


organism_name: Bilophila wadsworthia


organism_name: Enterocloster sp.


organism_name: Gemmiger qucibialis


organism_name: Phascolarctobacterium sp.


organism_name: Oscillospiraceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Bifidobacterium longum


organism_name: Alistipes putredinis


organism_name: bacterium


organism_name: Parabacteroides distasonis


organism_name: Clostridium sp.


organism_name: Odoribacter splanchnicus


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small; genus undefined

organism_name: [Eubacterium] siraeum


organism_name: Agathobacter rectalis


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Faecalibacterium prausnitzii


organism_name: Shigella flexneri


organism_name: Phocaeicola dorei


organism_name: Ruminococcus bromii


organism_name: Bacteroides cellulosilyticus


organism_name: Faecalibacterium sp.


organism_name: Parasutterella sp.


organism_name: Coprococcus sp.


organism_name: Akkermansia muciniphila


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Bacteroides uniformis


organism_name: Gemmiger qucibialis


organism_name: Dysosmobacter sp.


organism_name: Alistipes inops


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: bacterium


organism_name: Barnesiella intestinihominis


organism_name: [Ruminococcus] lactaris


organism_name: Alistipes onderdonkii


organism_name: Allocoprococcus comes


organism_name: Bacteroides clarus


organism_name: Prevotella sp.


organism_name: Ruminiclostridium sp.


organism_name: Segatella copri


organism_name: Lachnospiraceae bacterium


organism_name: Streptococcus agalactiae


organism_name: Eshraghiella crossota


excluded_from_refseq: derived from metagenome; fragmented assembly


organism_name: Segatella sp.


organism_name: Agathobacter rectalis


organism_name: Coprococcus sp.


organism_name: Faecalibacterium sp.


organism_name: Ruminococcus bromii


organism_name: Succinivibrio sp.


organism_name: bacterium


organism_name: Suilimivivens sp.


organism_name: Gemmiger qucibialis


organism_name: Dorea longicatena


organism_name: Prevotella pectinovora


organism_name: Prevotellamassilia sp.


organism_name: Fusicatenibacter saccharivorans


organism_name: Roseburia faecis


organism_name: Desulfovibrio sp.


organism_name: Mitsuokella jalaludinii


organism_name: Vescimonas sp.


organism_name: Duodenibacillus sp.


organism_name: Dialister sp.


organism_name: Catenibacterium mitsuokai


organism_name: Prevotella sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; genome length too small

organism_name: Segatella hominis


organism_name: Sodaliphilus sp.


organism_name: bacterium


organism_name: Faecalibacterium prausnitzii


organism_name: Ruminococcus sp.


organism_name: Holdemanella sp.


organism_name: Coprococcus sp.


organism_name: Anaerotignum faecicola


organism_name: Oribacterium sp.


organism_name: Dysosmobacter sp.


organism_name: Segatella copri


organism_name: Sutterella wadsworthensis


organism_name: Parabacteroides merdae


organism_name: Lachnospira eligens


organism_name: Succinivibrio sp.


organism_name: Parabacteroides distasonis


organism_name: Faecalibacterium sp.


organism_name: Waltera sp.


organism_name: Prevotella sp.


organism_name: Phascolarctobacterium succinatutens


organism_name: bacterium


organism_name: Prevotellamassilia sp.


organism_name: Selenomonas sp.


organism_name: Anaerotruncus colihominis


organism_name: Phocaeicola vulgatus


organism_name: Brachyspira aalborgi


organism_name: Agathobacter rectalis


organism_name: Alistipes dispar


organism_name: [Eubacterium] siraeum


organism_name: Paraprevotella clara


organism_name: Bilophila wadsworthia


organism_name: Succinivibrio sp.


organism_name: Clostridium sp.


organism_name: Streptococcus agalactiae


organism_name: Gemmiger formicilis


organism_name: Prevotellamassilia timonensis


organism_name: Roseburia hominis


organism_name: Prevotella sp.


organism_name: Prevotellamassilia sp.


organism_name: Suilimivivens sp.


organism_name: Mediterraneibacter faecis


organism_name: Oscillospiraceae bacterium


organism_name: bacterium


organism_name: Parasutterella sp.


organism_name: Flavonifractor plautii


organism_name: Parabacteroides distasonis


organism_name: Phocaeicola sp.


organism_name: Lawsonibacter sp.


organism_name: Phocaeicola plebeius


organism_name: Ruminococcus bromii


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Bacteroides fragilis


organism_name: Fusicatenibacter saccharivorans


organism_name: Clostridium sp.


organism_name: Phocaeicola coprocola


organism_name: Phocaeicola dorei


organism_name: Butyricimonas paravirosa


organism_name: Parabacteroides merdae


organism_name: Dysosmobacter welbionis


organism_name: Blautia faecis


organism_name: bacterium


organism_name: Alistipes onderdonkii


organism_name: Bacteroides uniformis


organism_name: Bilophila wadsworthia


organism_name: Alistipes communis


organism_name: Akkermansia muciniphila


organism_name: Roseburia faecis


organism_name: Ruthenibacterium lactatiformans


organism_name: Acutalibacter sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Eubacteriales bacterium


organism_name: Waltera sp.


organism_name: Roseburia inulinivorans


organism_name: Agathobacter rectalis


organism_name: Phascolarctobacterium succinatutens


organism_name: Enterocloster sp.


organism_name: Lachnospiraceae bacterium


organism_name: Bilophila sp.


organism_name: Phocaeicola massiliensis


organism_name: Gemmiger formicilis


organism_name: Faecalibacterium sp.


organism_name: Mitsuokella jalaludinii


organism_name: Vescimonas sp.


organism_name: Dialister sp.


excluded_from_refseq: from large multi-isolate project

isolate: WGS of M10374

organism_name: Neisseria meningitidis


organism_name: Parabacteroides distasonis


isolate: WGS of M09662


isolate: WGS of M10327


isolate: WGS of M10373


isolate: WGS of M10372


organism_name: bacterium


organism_name: Parabacteroides merdae


isolate: WGS of M10375


organism_name: Sellimonas intestinalis


organism_name: Mediterraneibacter gnavus


organism_name: Bacteroides ovatus


organism_name: Phocaeicola dorei


organism_name: Phascolarctobacterium faecium


isolate: WGS of M10383


isolate: WGS of M10376


isolate: WGS of M10491


isolate: WGS of M10498


isolate: WGS of M10496


organism_name: Ruthenibacterium lactatiformans


isolate: WGS of M10525


isolate: WGS of M09661


organism_name: Eubacteriales bacterium


organism_name: Prevotella sp.


organism_name: Enterocloster sp.


organism_name: Bacteroides thetaiotaomicron


isolate: WGS of M07191


organism_name: Sutterella wadsworthensis


organism_name: Mediterraneibacter torques


organism_name: Lawsonibacter sp.


organism_name: Flavonifractor plautii


organism_name: Enterocloster clostridioformis


organism_name: Streptococcus agalactiae


organism_name: Bacteroides uniformis


organism_name: Paraprevotella clara


organism_name: Bilophila wadsworthia


organism_name: Parabacteroides distasonis


organism_name: Faecalibacterium sp.


organism_name: bacterium


organism_name: Catenibacterium mitsuokai


organism_name: Alistipes communis


organism_name: Desulfovibrio sp.


organism_name: Duodenibacillus sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genome length too small

organism_name: Ruminococcus bromii


organism_name: Collinsella sp.


organism_name: Segatella hominis


organism_name: Faecalibacterium prausnitzii


organism_name: Lachnospira eligens


organism_name: Fusicatenibacter saccharivorans


organism_name: Dysosmobacter sp.


organism_name: Segatella sp.


organism_name: archaeon


organism_name: Eubacterium sp.


organism_name: Prevotella sp.


organism_name: Phascolarctobacterium faecium


organism_name: bacterium


organism_name: Methanobrevibacter smithii


organism_name: Parabacteroides sp.


organism_name: Clostridium sp.


organism_name: Blautia wexlerae


organism_name: Succinivibrio sp.


organism_name: Mediterraneibacter faecis


organism_name: Faecalibacterium sp.


organism_name: Roseburia faecis


organism_name: Prevotellamassilia sp.


organism_name: Slackia isoflavoniconvertens


organism_name: Bifidobacterium longum


organism_name: Ruminococcus sp.


organism_name: Coprococcus eutactus


organism_name: Holdemanella sp.


organism_name: Lachnospiraceae bacterium


organism_name: Coprococcus sp.


organism_name: Prevotella sp.


organism_name: Eshraghiella crossota


organism_name: [Eubacterium] siraeum


organism_name: bacterium


isolate: WGS of M10370

organism_name: Neisseria meningitidis


organism_name: Angelakisella sp.


organism_name: Bifidobacterium adolescentis


organism_name: Eubacteriales bacterium


organism_name: Dialister invisus


organism_name: Gemmiger formicilis


organism_name: Absicoccus sp.


organism_name: Mediterraneibacter gnavus


organism_name: Bacteroides faecis


organism_name: Phocaeicola vulgatus


organism_name: Anaerotignum lactatifermentans


organism_name: Bifidobacterium longum


organism_name: Bacteroides xylanisolvens


organism_name: Mediterraneibacter torques


organism_name: Clostridium sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Alistipes finegoldii


organism_name: Enterocloster sp.


organism_name: bacterium


asm_submitter: Peking university people's hospital

organism_name: Klebsiella pneumoniae


organism_name: Alistipes putredinis


organism_name: Angelakisella sp.


organism_name: Methanobrevibacter smithii


organism_name: Prevotella sp.


organism_name: Dysosmobacter welbionis


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome

organism_name: Alistipes communis


organism_name: Prevotellamassilia sp.


organism_name: Brachyspira aalborgi


organism_name: Alistipes shahii


organism_name: Phocaeicola vulgatus


organism_name: Coriobacteriaceae bacterium


excluded_from_refseq: derived from metagenome

organism_name: Alistipes ihumii


organism_name: Oribacterium sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Vescimonas sp.


organism_name: Faecalibacterium sp.


organism_name: bacterium


organism_name: Desulfovibrio sp.


organism_name: Eshraghiella crossota


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined


organism_name: Dialister sp.


organism_name: Duodenibacillus sp.


organism_name: Angelakisella sp.


organism_name: Dysosmobacter sp.


organism_name: Dorea longicatena


organism_name: Bacteroides uniformis


organism_name: Faecalibacterium prausnitzii


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Clostridium sp.


organism_name: Phocaeicola vulgatus


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Collinsella sp.


organism_name: Sutterella wadsworthensis


organism_name: Prevotella sp.


organism_name: Agathobacter rectalis


organism_name: bacterium


organism_name: Alistipes shahii


organism_name: Succinivibrio sp.


organism_name: Desulfovibrio sp.


organism_name: Agathobacter sp.


organism_name: Segatella sp.


organism_name: Prevotellamassilia timonensis


organism_name: Klebsiella pneumoniae


organism_name: Eubacterium sp.


organism_name: Gemmiger formicilis


organism_name: Acidaminococcus fermentans


organism_name: Segatella hominis


organism_name: Dysosmobacter sp.


organism_name: Sodaliphilus sp.


organism_name: Mitsuokella jalaludinii


organism_name: Dialister sp.


organism_name: Prevotella sp.


organism_name: bacterium


organism_name: Duodenibacillus massiliensis


organism_name: Enterocloster sp.


organism_name: Alistipes sp.


organism_name: Bacteroides stercoris


organism_name: Alistipes inops


organism_name: Alistipes putredinis


organism_name: Alistipes shahii


organism_name: Flavonifractor plautii


organism_name: [Eubacterium] siraeum


organism_name: Lawsonibacter sp.


organism_name: Odoribacter splanchnicus


organism_name: Parasutterella excrementihominis


organism_name: Bifidobacterium longum


organism_name: Eubacterium sp.


organism_name: Bacteroides finegoldii


organism_name: Bifidobacterium bifidum


organism_name: bacterium


organism_name: Blautia wexlerae


organism_name: Alistipes ihumii


organism_name: Barnesiella intestinihominis


organism_name: Collinsella sp.


organism_name: Faecalibacterium sp.


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Ruminococcus bromii


organism_name: Gemmiger qucibialis


organism_name: Bacteroides xylanisolvens


organism_name: Allocoprococcus comes


organism_name: Parabacteroides distasonis


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


organism_name: Frisingicoccus sp.


organism_name: Gallintestinimicrobium sp.


isolate: WGS of M10536

organism_name: Neisseria meningitidis


organism_name: Bacteroides ovatus


isolate: WGS of M10546


organism_name: Parabacteroides merdae


isolate: WGS of M10837


isolate: WGS of M10548


organism_name: [Lactobacillus] rogosae


organism_name: Faecalibacterium prausnitzii


isolate: WGS of M10792


organism_name: Bacteroides faecis


organism_name: Dysosmobacter welbionis


isolate: WGS of M10856


isolate: WGS of M10855


isolate: WGS of M10900


isolate: WGS of M10920


isolate: WGS of M10858


isolate: WGS of M10935


organism_name: Roseburia sp.


organism_name: Gemmiger sp.


isolate: WGS of M10934


organism_name: Phocaeicola vulgatus


organism_name: Clostridium sp.


organism_name: Sutterella wadsworthensis


isolate: WGS of M10994


isolate: WGS of M07252


organism_name: Bacteroides uniformis


organism_name: Collinsella aerofaciens


isolate: WGS of M11004


isolate: WGS of M10995


isolate: WGS of M11003


organism_name: Faecalibacterium sp.


isolate: WGS of M11005


isolate: WGS of M11022


organism_name: Prevotella sp.


isolate: WGS of M11834


isolate: WGS of M11906


organism_name: Odoribacter splanchnicus


isolate: WGS of M11985

organism_name: Neisseria meningitidis


isolate: WGS of M11971


isolate: WGS of M11926


organism_name: Klebsiella pneumoniae


organism_name: Olsenella sp.


organism_name: Paraprevotella clara


organism_name: bacterium


isolate: WGS of M12014


organism_name: Ruminococcus bromii


isolate: WGS of M12140


isolate: WGS of M07274


organism_name: Roseburia faecis


isolate: WGS of M12098


organism_name: Gallintestinimicrobium sp.


isolate: WGS of M12185


organism_name: Segatella hominis


organism_name: Desulfovibrio sp.


organism_name: Duodenibacillus sp.


organism_name: Alistipes sp.


organism_name: Dysosmobacter sp.


organism_name: Segatella copri


organism_name: Oribacterium sp.


organism_name: Segatella sp.


organism_name: Prevotellamassilia sp.


organism_name: Prevotella sp.


organism_name: Eubacterium sp.


organism_name: Megasphaera sp.


isolate: WGS of M12186

organism_name: Neisseria meningitidis


asm_submitter: Vermont Department of Health Laboratory

organism_name: Salmonella enterica


asm_submitter: CDC

organism_name: Escherichia coli


organism_name: Prevotella pectinovora


organism_name: Vescimonas sp.


organism_name: Roseburia inulinivorans


organism_name: Faecalibacterium sp.


organism_name: Agathobacter rectalis


organism_name: bacterium


organism_name: Phascolarctobacterium succinatutens


organism_name: Gemmiger formicilis


organism_name: Coprococcus sp.


organism_name: Angelakisella sp.


organism_name: Eshraghiella crossota


organism_name: Clostridium sp.


organism_name: Mitsuokella jalaludinii


organism_name: Prevotella sp.


organism_name: Methanobrevibacter smithii


organism_name: Segatella hominis


organism_name: Escherichia coli


organism_name: archaeon


organism_name: [Clostridium] leptum


organism_name: Catenibacterium sp.


organism_name: Campylobacter jejuni


organism_name: [Eubacterium] siraeum


organism_name: Parabacteroides sp.


organism_name: Vescimonas sp.


organism_name: Faecalibacterium sp.


organism_name: Collinsella sp.


organism_name: Segatella copri


organism_name: Bifidobacterium adolescentis


organism_name: Faecalibacterium prausnitzii


organism_name: Dialister histaminiformans


organism_name: Bacteroides intestinalis


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Bilophila wadsworthia


organism_name: Bacteroides xylanisolvens


organism_name: Parabacteroides distasonis


organism_name: Bacteroides uniformis


organism_name: Haemophilus parainfluenzae


organism_name: Eubacterium sp.


organism_name: Weissella confusa


organism_name: Dysosmobacter welbionis


organism_name: Alistipes sp.


organism_name: Clostridium sp.


organism_name: Hominilimicola sp.


organism_name: Bifidobacterium longum


organism_name: bacterium


organism_name: Butyricimonas virosa


organism_name: Fusicatenibacter saccharivorans


organism_name: Ruthenibacterium lactatiformans


organism_name: Gallintestinimicrobium sp.


organism_name: Enterocloster sp.


organism_name: Mediterraneibacter gnavus


organism_name: Alistipes ihumii


organism_name: Lachnospiraceae bacterium


organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


organism_name: Dysosmobacter sp.


organism_name: Agathobacter rectalis


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Lachnospira sp.


organism_name: Phascolarctobacterium faecium


organism_name: Lawsonibacter sp.


organism_name: Collinsella sp.


organism_name: bacterium


organism_name: Alistipes shahii


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Roseburia faecis


organism_name: Lachnospira eligens


organism_name: Alistipes onderdonkii


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Parasutterella sp.


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: [Clostridium] leptum


organism_name: Ruminococcus bromii


organism_name: Blautia wexlerae


organism_name: Streptococcus parasanguinis


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Flavonifractor plautii


organism_name: Hallella sp.


organism_name: Coriobacteriaceae bacterium


organism_name: Campylobacter jejuni


organism_name: bacterium


organism_name: Alistipes senegalensis


organism_name: Campylobacter coli


organism_name: Prevotellamassilia sp.


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Faecalibacterium sp.


organism_name: Alistipes shahii


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Oribacterium sp.


organism_name: Gemmiger formicilis


organism_name: Angelakisella sp.


organism_name: Lachnospiraceae bacterium


organism_name: Ruminococcus sp.


organism_name: Phascolarctobacterium succinatutens


organism_name: Eshraghiella crossota


asm_submitter: Aarhus University

organism_name: Escherichia coli


organism_name: Butyrivibrio sp.


organism_name: bacterium


organism_name: Prevotella sp.


organism_name: archaeon


organism_name: Desulfovibrio sp.


organism_name: Oscillospiraceae bacterium


organism_name: Faecalibacterium prausnitzii


organism_name: Dialister sp.


organism_name: Ruthenibacterium lactatiformans


organism_name: Sodaliphilus sp.


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Campylobacter upsaliensis


organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


organism_name: Dysosmobacter sp.


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica


organism_name: Parabacteroides sp.


organism_name: bacterium


organism_name: Duodenibacillus sp.


organism_name: Shigella flexneri


organism_name: Prevotellamassilia sp.


organism_name: Prevotella sp.


organism_name: Salmonella enterica subsp. enterica serovar London


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Phocaeicola vulgatus


organism_name: Methanobrevibacter smithii


organism_name: Acutalibacter sp.


organism_name: Lachnospiraceae bacterium


organism_name: Lactobacillus paragasseri


organism_name: Klebsiella variicola


organism_name: Roseburia sp.


organism_name: Parabacteroides merdae


organism_name: Salmonella enterica


organism_name: Lachnospira sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Bifidobacterium longum


organism_name: Alistipes finegoldii


organism_name: Mailhella sp.


organism_name: Alistipes dispar


organism_name: bacterium


organism_name: Streptococcus gallolyticus


organism_name: Phocaeicola sp.


organism_name: Streptococcus salivarius


organism_name: Clostridium sp.


excluded_from_refseq: unverified source organism; derived from metagenome; fragmented assembly; genus undefined

organism_name: Clostridiaceae bacterium


organism_name: Butyrivibrio sp.


organism_name: Phocaeicola dorei


organism_name: Parabacteroides distasonis


organism_name: Duodenibacillus sp.


organism_name: Faecalibacterium sp.


organism_name: Alistipes senegalensis


organism_name: Bifidobacterium adolescentis


organism_name: Gemmiger formicilis


organism_name: Prevotella sp.


organism_name: Barnesiella intestinihominis


asm_submitter: The University of Tennessee

organism_name: Xenorhabdus sp. TH1


organism_name: bacterium


organism_name: Agathobacter rectalis


organism_name: Phocaeicola plebeius


organism_name: Alistipes sp.


organism_name: Phascolarctobacterium sp.


organism_name: Collinsella sp.


organism_name: Allocoprococcus comes


organism_name: Bacteroides uniformis


organism_name: Paraprevotella clara


organism_name: Streptococcus parasanguinis


organism_name: archaeon


organism_name: Lachnospiraceae bacterium


organism_name: Salmonella enterica


organism_name: Mailhella sp.


organism_name: Prevotella sp.


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


organism_name: Mitsuokella jalaludinii


organism_name: bacterium


organism_name: Escherichia coli


organism_name: Duodenibacillus massiliensis


organism_name: Oribacterium sp.


isolate: WGS of M12223

organism_name: Neisseria meningitidis


isolate: WGS of M12270


organism_name: Negativibacillus sp.


organism_name: Parabacteroides distasonis


isolate: WGS of M12329


isolate: WGS of M12376


organism_name: Dysosmobacter welbionis


isolate: WGS of M12408


isolate: WGS of M13347


organism_name: Phocaeicola vulgatus


isolate: WGS of M13348


organism_name: Faecalibacterium sp.


isolate: WGS of M07385


isolate: WGS of M13361


isolate: WGS of M13362


isolate: WGS of M13398


isolate: WGS of M13438


organism_name: Sodaliphilus sp.


organism_name: Phascolarctobacterium succinatutens


isolate: WGS of M13546


organism_name: Mediterraneibacter faecis


isolate: WGS of M13458


isolate: WGS of M13520


isolate: WGS of M13547


isolate: WGS of M13567


organism_name: Agathobacter rectalis


organism_name: Flavonifractor sp.


organism_name: Fusicatenibacter saccharivorans


isolate: WGS of M13568


organism_name: Faecalibacterium prausnitzii


organism_name: Dysosmobacter sp.


organism_name: [Eubacterium] siraeum


isolate: WGS of M07389


isolate: WGS of M06738


organism_name: Alistipes putredinis


isolate: WGS of M13569


isolate: WGS of M16012


isolate: WGS of M16019


organism_name: Blautia faecis


organism_name: Acidaminococcus intestini


organism_name: Gemmiger qucibialis


isolate: WGS of M16107

organism_name: Neisseria meningitidis


organism_name: Ruminococcus sp.


isolate: WGS of M16086


organism_name: Acutalibacter sp.


isolate: WGS of M16135


organism_name: Parabacteroides distasonis


organism_name: Bacteroides uniformis


organism_name: Gemmiger formicilis


organism_name: Parasutterella sp.


organism_name: Lachnospira sp.


organism_name: Bacteroides thetaiotaomicron


organism_name: Eubacterium ramulus


organism_name: Alistipes shahii


organism_name: Dialister invisus


organism_name: Blautia sp.


organism_name: Dysosmobacter welbionis


organism_name: Phocaeicola vulgatus


organism_name: Alistipes communis


organism_name: Ruthenibacterium lactatiformans


organism_name: Lawsonibacter sp.


organism_name: Clostridium sp.


organism_name: Anaerotignum lactatifermentans


organism_name: Xenorhabdus griffiniae


organism_name: Bacteroides xylanisolvens


organism_name: Bifidobacterium pullorum subsp. gallinarum


organism_name: Faecalitalea sp.


organism_name: Prevotella sp.


organism_name: Roseburia faecis


organism_name: Vescimonas sp.


organism_name: Oribacterium sp.


organism_name: bacterium


organism_name: Faecalibacterium sp.


organism_name: Segatella copri


isolate: WGS of M07499

organism_name: Neisseria meningitidis


isolate: WGS of M16137


isolate: WGS of M16453


isolate: WGS of M16471


isolate: WGS of M16140


isolate: WGS of M16564


isolate: WGS of M16683


isolate: WGS of M16613


isolate: WGS of M16686


organism_name: Bifidobacterium adolescentis


isolate: WGS of M16684


isolate: WGS of M16692


organism_name: Treponema succinifaciens


isolate: WGS of M07681


isolate: WGS of M07764


organism_name: Sodaliphilus sp.


isolate: WGS of M07781


isolate: WGS of M07773


organism_name: Anaerovibrio sp.


isolate: WGS of M07818


isolate: WGS of M07791


isolate: WGS of M07839


isolate: WGS of M07959


organism_name: Dialister sp.


organism_name: Phascolarctobacterium succinatutens


isolate: WGS of M07846


isolate: WGS of M06941


isolate: WGS of M07968


organism_name: Lachnospiraceae bacterium


isolate: WGS of M07961


organism_name: Agathobacter rectalis


isolate: WGS of M07969


organism_name: Prevotellamassilia timonensis


isolate: WGS of M06970


isolate: WGS of M07989


isolate: WGS of M07975


organism_name: Prevotellamassilia sp.


organism_name: Bifidobacterium catenulatum


isolate: WGS of M08420


isolate: WGS of M08389


organism_name: Hallella sp.


isolate: WGS of M08449


organism_name: Mitsuokella jalaludinii


organism_name: Prevotella pectinovora


isolate: WGS of M08436


isolate: WGS of M08487


isolate: WGS of M08454


isolate: WGS of M08451


organism_name: Coprococcus sp.


organism_name: Treponema sp.


organism_name: Prevotella sp.


isolate: WGS of M08523

organism_name: Neisseria meningitidis


isolate: WGS of M08378


organism_name: bacterium


organism_name: Salmonella enterica subsp. enterica serovar Thompson


organism_name: Collinsella sp.


isolate: WGS of M08383


organism_name: Acidaminococcus timonensis


organism_name: Faecalibacterium sp.


organism_name: Gemmiger qucibialis


organism_name: Succinivibrio sp.


organism_name: Lachnospira eligens


organism_name: Prevotellamassilia sp.


organism_name: Fusicatenibacter saccharivorans


organism_name: Clostridium sp.


organism_name: Allocoprococcus comes


organism_name: Butyrivibrio sp.


organism_name: Lachnospiraceae bacterium


organism_name: Bifidobacterium adolescentis


organism_name: Xenorhabdus griffiniae


organism_name: Bacteroides uniformis


organism_name: Bacteroides ovatus


organism_name: Vescimonas sp.


organism_name: Dysosmobacter sp.


organism_name: [Lactobacillus] rogosae


organism_name: Phocaeicola dorei


organism_name: Parabacteroides distasonis


organism_name: Odoribacter splanchnicus


isolate: WGS of M07003

organism_name: Neisseria meningitidis


isolate: WGS of M08437


isolate: WGS of M09669


isolate: WGS of M08462


isolate: WGS of M09701


organism_name: Mediterraneibacter gnavus


organism_name: Oscillospiraceae bacterium


organism_name: bacterium


isolate: WGS of M09702


isolate: WGS of M09779


isolate: WGS of M09823


organism_name: Mailhella sp.


organism_name: Bacteroides caccae


isolate: WGS of M09833


organism_name: Bacteroides fragilis


organism_name: Roseburia faecis


isolate: WGS of M09831


organism_name: Flavonifractor sp.


isolate: WGS of M09909


isolate: WGS of M09904


isolate: WGS of M09910


isolate: WGS of M09903


organism_name: Bacteroides stercoris


organism_name: Bacteroides uniformis


organism_name: Alistipes finegoldii


organism_name: Barnesiella intestinihominis


organism_name: Acidaminococcales bacterium


organism_name: Parasutterella sp.


organism_name: Gemmiger qucibialis


organism_name: Dialister invisus


organism_name: Alistipes communis


organism_name: Dysosmobacter welbionis


organism_name: Dakarella massiliensis


organism_name: Treponema sp.


organism_name: bacterium


organism_name: Holdemanella sp.


organism_name: Gemmiger sp.


organism_name: Segatella sp.


organism_name: Prevotella sp.


organism_name: Lachnospiraceae bacterium


organism_name: Desulfovibrio sp.


organism_name: Angelakisella sp.


organism_name: Succinivibrio sp.


organism_name: Prevotellamassilia sp.


organism_name: Acidaminococcus fermentans


organism_name: Dorea longicatena


organism_name: Roseburia inulinivorans


organism_name: Parabacteroides distasonis


organism_name: Faecalibacterium prausnitzii


organism_name: Dysosmobacter sp.


organism_name: Gemmiger formicilis


organism_name: [Lactobacillus] rogosae


organism_name: Prevotella pectinovora


organism_name: Phocaeicola sp.


organism_name: Lawsonibacter sp.


organism_name: Dysosmobacter welbionis


organism_name: Pseudomonas aeruginosa


organism_name: Prevotella sp.


organism_name: Salmonella enterica


isolate: WGS of M09912

organism_name: Neisseria meningitidis


isolate: WGS of M07111


organism_name: Holdemanella sp.


isolate: WGS of M09914


organism_name: Olsenella sp.


organism_name: Alistipes shahii


isolate: WGS of M09929


organism_name: Paraprevotella clara


isolate: WGS of M11042


isolate: WGS of M11051


organism_name: Ruminococcus sp.


isolate: WGS of M11048


organism_name: Phascolarctobacterium succinatutens


isolate: WGS of M11053


isolate: WGS of M07253


isolate: WGS of M11072


organism_name: Collinsella aerofaciens


isolate: WGS of M11061


isolate: WGS of M11095


organism_name: Roseburia faecis


isolate: WGS of M11113


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; genome length too small

organism_name: Alistipes communis


organism_name: bacterium


organism_name: Vescimonas sp.


isolate: WGS of M11114


isolate: WGS of M11163


isolate: WGS of M11149


isolate: WGS of M11196


organism_name: Faecalibacterium sp.


organism_name: Acidaminococcus intestini


isolate: WGS of M11285


isolate: WGS of M11205


isolate: WGS of M11204


isolate: WGS of M12410


organism_name: Agathobacter rectalis


organism_name: Gemmiger qucibialis


isolate: WGS of M07276


organism_name: Parabacteroides merdae


organism_name: Duodenibacillus sp.


isolate: WGS of M12425

organism_name: Neisseria meningitidis


isolate: WGS of M12458


organism_name: Anthropogastromicrobium sp.


organism_name: Phocaeicola dorei


isolate: WGS of M12502


isolate: WGS of M12459


organism_name: Coprococcus sp.


isolate: WGS of M12500


organism_name: Bacteroides uniformis


isolate: WGS of M12550


isolate: WGS of M12559


isolate: WGS of M12566


organism_name: Prevotella sp.


organism_name: Campylobacter jejuni


organism_name: Blautia wexlerae


organism_name: Listeria monocytogenes


organism_name: Prevotellamassilia sp.


organism_name: Mediterraneibacter faecis


organism_name: Phascolarctobacterium succinatutens


organism_name: Allocoprococcus comes


organism_name: bacterium


organism_name: Sodaliphilus sp.


organism_name: Ruminococcus sp.


organism_name: Angelakisella sp.


organism_name: Catenibacterium sp.


organism_name: Duodenibacillus sp.


organism_name: Succinivibrio sp.


organism_name: Fusicatenibacter saccharivorans


organism_name: Coprococcus sp.


organism_name: Bifidobacterium catenulatum


organism_name: Mitsuokella jalaludinii


organism_name: Prevotella sp.


organism_name: Dorea longicatena


organism_name: Anaerotignum faecicola


organism_name: Duodenibacillus massiliensis


organism_name: Escherichia coli


organism_name: Salmonella enterica


organism_name: bacterium


organism_name: Campylobacter jejuni


organism_name: Sutterella wadsworthensis


organism_name: Dysosmobacter sp.


organism_name: Eshraghiella crossota


organism_name: Segatella sp.


organism_name: Shigella sonnei


organism_name: Klebsiella pneumoniae


isolate: WGS of M07330

organism_name: Neisseria meningitidis


organism_name: Megasphaera sp.


isolate: WGS of M12604


isolate: WGS of M12568


organism_name: Lachnospiraceae bacterium


organism_name: Segatella hominis


isolate: WGS of M12622


isolate: WGS of M12647


organism_name: Faecalibacterium prausnitzii


isolate: WGS of M12690


isolate: WGS of M14028


isolate: WGS of M13956


organism_name: Phocaeicola vulgatus


organism_name: Blautia sp.


organism_name: Acidaminococcus intestini


organism_name: Salmonella enterica


isolate: WGS of M14113


organism_name: bacterium


organism_name: Prevotella sp.


organism_name: Ruminococcus sp.


organism_name: Gemmiger qucibialis


organism_name: Oscillospiraceae bacterium


organism_name: Duodenibacillus massiliensis


organism_name: Desulfovibrio sp.


organism_name: Agathobacter rectalis


organism_name: Roseburia inulinivorans


organism_name: Sutterella wadsworthensis


organism_name: Bacteroides uniformis


organism_name: Acidaminococcus timonensis


organism_name: Dysosmobacter welbionis


organism_name: Bilophila wadsworthia


organism_name: Prevotellamassilia sp.


organism_name: Alistipes communis


organism_name: Mitsuokella jalaludinii


organism_name: bacterium


organism_name: Clostridium sp.


organism_name: Allocoprococcus comes


organism_name: Prevotella sp.


organism_name: Parabacteroides distasonis


organism_name: Segatella copri


organism_name: Dorea longicatena


organism_name: Succinivibrio sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Segatella hominis


organism_name: Prevotella pectinovora


organism_name: Sutterella wadsworthensis


organism_name: Gemmiger formicilis


organism_name: Collinsella sp.


organism_name: Faecalibacterium sp.


organism_name: Bilophila wadsworthia


organism_name: Serratia marcescens


organism_name: Salmonella enterica


organism_name: Megamonas funiformis


organism_name: Alistipes shahii


organism_name: Fusobacterium mortiferum


organism_name: Parabacteroides merdae


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Phocaeicola sp.


organism_name: Segatella sp.


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Prevotellamassilia sp.


organism_name: Escherichia coli


organism_name: Shigella flexneri


organism_name: [Lactobacillus] rogosae


organism_name: Prevotella sp.


organism_name: Campylobacter coli


organism_name: Phocaeicola vulgatus


organism_name: Lachnospiraceae bacterium


organism_name: bacterium


organism_name: Clostridium sp.


organism_name: Salmonella enterica


organism_name: Phascolarctobacterium succinatutens


organism_name: Segatella copri


organism_name: Shigella sonnei


isolate: WGS of M14073

organism_name: Neisseria meningitidis


organism_name: Duodenibacillus sp.


organism_name: Ruminococcus callidus


organism_name: [Eubacterium] siraeum


isolate: WGS of M14181


isolate: WGS of M14130


isolate: WGS of M07435


isolate: WGS of M14224


isolate: WGS of M14285


organism_name: Faecalibacterium prausnitzii


isolate: WGS of M14290


isolate: WGS of M14293


isolate: WGS of M14294


isolate: WGS of M14935


isolate: WGS of M14295


organism_name: Segatella sp.


organism_name: Desulfovibrio sp.


isolate: WGS of M14987


isolate: WGS of M14988


isolate: WGS of M15009


isolate: WGS of M14990


organism_name: Succinivibrio sp.


organism_name: Prevotella sp.


organism_name: Gemmiger formicilis


organism_name: Coprococcus sp.


organism_name: Roseburia sp.


organism_name: Lachnospiraceae bacterium


organism_name: Dysosmobacter sp.


organism_name: bacterium


organism_name: Prevotella pectinovora


organism_name: Anaerovibrio sp.


organism_name: Segatella hominis


organism_name: Anaerotignum faecicola


organism_name: Faecalibacterium sp.


isolate: WGS of M15083

organism_name: Neisseria meningitidis


isolate: WGS of M07452


isolate: WGS of M15163


isolate: WGS of M15041


isolate: WGS of M15040


organism_name: Ruminococcus bromii


isolate: WGS of M15085


organism_name: Duodenibacillus massiliensis


isolate: WGS of M15165


isolate: WGS of M15276


organism_name: Anaerotruncus colihominis


organism_name: Escherichia coli


organism_name: Methanobrevibacter smithii


isolate: WGS of M15352


isolate: WGS of M15295


organism_name: Butyricimonas virosa


organism_name: Ruthenibacterium lactatiformans


organism_name: Salmonella enterica


organism_name: Evtepia gabavorous


organism_name: Parabacteroides goldsteinii


organism_name: bacterium


organism_name: Campylobacter jejuni


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Phocaeicola vulgatus


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Phascolarctobacterium sp.


organism_name: Ruthenibacterium sp.


organism_name: Salmonella enterica subsp. enterica serovar Meleagridis


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Bacteroides thetaiotaomicron


organism_name: Flavonifractor plautii


organism_name: Claveliimonas sp.


organism_name: [Eubacterium] siraeum


organism_name: Mediterraneibacter gnavus


organism_name: bacterium


organism_name: Mediterraneibacter torques


organism_name: Alistipes inops


organism_name: Roseburia faecis


organism_name: Dysosmobacter welbionis


organism_name: Alistipes communis


organism_name: Bacteroides stercoris


organism_name: Negativibacillus sp.


organism_name: Eisenbergiella tayi


organism_name: Hungatella effluvii


organism_name: Rubneribacter badeniensis


organism_name: Collinsella sp.


organism_name: Bacteroides uniformis


organism_name: Alistipes shahii


organism_name: Fusicatenibacter saccharivorans


organism_name: Faecalibacterium sp.


organism_name: Parabacteroides distasonis


excluded_from_refseq: contaminated; unverified source organism; derived from metagenome; fragmented assembly

organism_name: Butyricicoccus sp.


organism_name: bacterium


organism_name: Jutongia sp.


organism_name: Prevotella sp.


organism_name: Bilophila wadsworthia


organism_name: Odoribacter splanchnicus


organism_name: Duodenibacillus sp.


organism_name: Eshraghiella crossota


organism_name: Coprococcus sp.


organism_name: Sutterella wadsworthensis


organism_name: Gemmiger sp.


organism_name: Lachnospiraceae bacterium


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Agathobacter rectalis


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Dysosmobacter sp.


organism_name: Waltera sp.


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: bacterium


organism_name: Shigella flexneri


organism_name: Clostridium sp.


organism_name: Dialister invisus


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Alistipes senegalensis


organism_name: Salmonella enterica


organism_name: Prevotella sp.


organism_name: Escherichia coli


isolate: WGS of M15395

organism_name: Neisseria meningitidis


organism_name: Allocoprococcus comes


isolate: WGS of M16693


isolate: WGS of M07508


isolate: WGS of M16694


isolate: WGS of M16715


isolate: WGS of M16729


organism_name: Mitsuokella jalaludinii


isolate: WGS of M16748


isolate: WGS of M16746


isolate: WGS of M16822


isolate: WGS of M17140


organism_name: Campylobacter sp.


isolate: WGS of M17144


organism_name: Roseburia hominis


organism_name: Eubacterium sp.


isolate: WGS of M06747


organism_name: Anaerotignum faecicola


isolate: WGS of M17146


isolate: WGS of M17147


isolate: WGS of M07537


isolate: WGS of M17463


isolate: WGS of M17498


isolate: WGS of M08540


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Alistipes communis


organism_name: Dysosmobacter sp.


isolate: WGS of M08640


isolate: WGS of M08641


isolate: WGS of M08664


organism_name: Lachnospira eligens


organism_name: bacterium


isolate: WGS of M08747


organism_name: Segatella copri


organism_name: Lachnospira sp.


isolate: WGS of M08717


organism_name: Bacteroides uniformis


isolate: WGS of M06725


isolate: WGS of M06724


organism_name: Salmonella enterica


organism_name: Faecalibacterium prausnitzii


organism_name: Dialister sp.


organism_name: Allocoprococcus comes


organism_name: Lachnospiraceae bacterium


organism_name: Phocaeicola vulgatus


organism_name: Roseburia inulinivorans


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Escherichia coli


organism_name: Olsenella sp.


organism_name: Shigella sonnei


organism_name: Succinivibrio sp.


organism_name: Segatella sp.


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Agathobacter rectalis


organism_name: Lachnospira sp.


organism_name: Parabacteroides merdae


organism_name: Faecalibacterium sp.


organism_name: Gemmiger qucibialis


organism_name: Enterocloster sp.


organism_name: Gemmiger formicilis


organism_name: Paraprevotella clara


organism_name: Faecalibacterium prausnitzii


organism_name: [Lactobacillus] rogosae


organism_name: bacterium


organism_name: Acidaminococcus timonensis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Escherichia coli


organism_name: Holdemanella biformis


organism_name: Parabacteroides distasonis


organism_name: Streptococcus thermophilus


organism_name: Shigella sonnei


organism_name: Clostridium sp.


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Lachnospira eligens


organism_name: Sutterella wadsworthensis


organism_name: Salmonella enterica


organism_name: Desulfovibrio sp.


organism_name: Phascolarctobacterium succinatutens


organism_name: Bacteroides stercoris


isolate: WGS of M07004

organism_name: Neisseria meningitidis


organism_name: bacterium


isolate: WGS of M08780


isolate: WGS of M08763


organism_name: Prevotellamassilia sp.


isolate: WGS of M08781


isolate: WGS of M08785


organism_name: Prevotella sp.


organism_name: Escherichia coli


organism_name: Collinsella sp.


isolate: WGS of M08858


isolate: WGS of M08859


organism_name: Segatella copri


isolate: WGS of M08883


organism_name: Roseburia intestinalis


organism_name: Mediterraneibacter faecis


isolate: WGS of M08853


isolate: WGS of M08912


organism_name: Duodenibacillus sp.


isolate: WGS of M08959


isolate: WGS of M08916


organism_name: Segatella hominis


organism_name: Bilophila wadsworthia


organism_name: Faecalibacterium sp.


isolate: WGS of M08966


isolate: WGS of M08983


isolate: WGS of M08984


organism_name: Blautia stercoris


isolate: WGS of M10549


organism_name: Bacteroides thetaiotaomicron


organism_name: Agathobaculum sp.


isolate: WGS of M10566


isolate: WGS of M10573


organism_name: Alistipes sp.


isolate: WGS of M07010

organism_name: Neisseria meningitidis


organism_name: Alistipes inops


organism_name: Bacteroides cellulosilyticus