organism_name: Candidatus Nitrosocaldus sp.


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: The University of Texas at Austin

assembly_level: Scaffold

assembly_type: haploid

excluded_from_refseq: derived from metagenome

genome_rep: Full

group: archaea

organism_name: Saccharolobus sp.

release_type: Major

version_status: latest


organism_name: Candidatus Rehaiarchaeum fermentans


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Thermoplasmata archaeon


assembly_level: Contig

organism_name: Thermoplasmatales archaeon


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Metallosphaera sp.


paired_asm_comp: identical


asm_submitter: CDC

excluded_from_refseq: from large multi-isolate project

group: bacteria

organism_name: Salmonella enterica


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Campylobacter jejuni


organism_name: Thermofilum sp.


organism_name: Thermoproteota archaeon


organism_name: Candidatus Bathyarchaeia archaeon


organism_name: Candidatus Korarchaeum sp.


organism_name: Candidatus Micrarchaeaceae archaeon


organism_name: Nitrososphaerota archaeon


organism_name: Nitrososphaerales archaeon


organism_name: Candidatus Parvarchaeum sp.


organism_name: Candidatus Methanomethylicia archaeon


organism_name: Fervidicoccaceae archaeon


organism_name: Candidatus Micrarchaeia archaeon


organism_name: Methanothrix sp.


organism_name: Nitrososphaeria archaeon


excluded_from_refseq: derived from metagenome; fragmented assembly


organism_name: Sulfolobales archaeon


organism_name: Thermoplasmata archaeon


organism_name: Metallosphaera sp.


organism_name: Thermoplasmatales archaeon


organism_name: Conexivisphaerales archaeon


organism_name: Candidatus Woesearchaeota archaeon


organism_name: Archaeoglobaceae archaeon


organism_name: Candidatus Jordarchaeales archaeon


organism_name: Zestosphaera sp.


organism_name: Candidatus Micrarchaeaceae archaeon


organism_name: Thermoprotei archaeon


organism_name: Candidatus Parvarchaeota archaeon


organism_name: Methanomassiliicoccales archaeon


organism_name: Saccharolobus sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined


organism_name: Thermoproteota archaeon


organism_name: Desulfurococcus sp.


organism_name: Candidatus Micrarchaeia archaeon


organism_name: Fervidicoccaceae archaeon


organism_name: Sulfolobales archaeon


organism_name: Pyrobaculum sp.


organism_name: Nitrososphaerota archaeon


organism_name: Metallosphaera sp.


organism_name: Candidatus Bathyarchaeia archaeon


organism_name: Conexivisphaerales archaeon


organism_name: Thermoproteus sp.


organism_name: Salmonella enterica


organism_name: Nitrososphaeria archaeon


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Escherichia coli


organism_name: Thermoplasmata archaeon


organism_name: Archaeoglobaceae archaeon


organism_name: Candidatus Micrarchaeaceae archaeon


organism_name: Thermofilum sp.


organism_name: Thermoplasmatales archaeon


organism_name: Thermoproteota archaeon


organism_name: Candidatus Micrarchaeia archaeon


organism_name: Fervidicoccaceae archaeon


organism_name: Saccharolobus sp.


organism_name: Desulfurococcaceae archaeon


organism_name: Metallosphaera sp.


organism_name: Nitrososphaerales archaeon


organism_name: Candidatus Bathyarchaeia archaeon


organism_name: archaeon


organism_name: Candidatus Jordarchaeales archaeon


organism_name: Thermoprotei archaeon


organism_name: Candidatus Nanoarchaeia archaeon


organism_name: Candidatus Korarchaeum sp.


organism_name: Nitrososphaerota archaeon


organism_name: Nitrososphaeria archaeon


organism_name: Conexivisphaerales archaeon


organism_name: Thermoplasmata archaeon


organism_name: Archaeoglobaceae archaeon


organism_name: Thermoproteota archaeon


organism_name: Candidatus Bilamarchaeaceae archaeon


organism_name: Hadarchaeales archaeon (SeqCode)


organism_name: Thermoplasmataceae archaeon


organism_name: Candidatus Micrarchaeia archaeon


organism_name: Thermofilum sp.


organism_name: Metallosphaera sp.


organism_name: Hadarchaeum sp. (SeqCode)


organism_name: Thermoplasmatales archaeon


organism_name: Candidatus Bathyarchaeia archaeon


organism_name: Thermoprotei archaeon


organism_name: Nitrososphaerales archaeon


organism_name: Candidatus Micrarchaeaceae archaeon


organism_name: Saccharolobus sp.


organism_name: Sulfolobales archaeon


organism_name: Candidatus Jordarchaeaceae archaeon


organism_name: Thermoplasmata archaeon


organism_name: Candidatus Nanoarchaeia archaeon


organism_name: Candidatus Pacearchaeota archaeon


organism_name: Thermoplasmatota archaeon


organism_name: Candidatus Woesearchaeota archaeon


organism_name: Candidatus Iainarchaeum sp.


organism_name: Candidatus Bilamarchaeaceae archaeon


organism_name: Candidatus Nitrosotenuis sp.


organism_name: Candidatus Norongarragalinales archaeon


organism_name: Candidatus Caldarchaeum sp.


organism_name: Candidatus Nitrosocaldaceae archaeon


organism_name: Candidatus Nitrosocaldus sp.


organism_name: Nitrososphaerota archaeon


organism_name: Candidatus Anstonellaceae archaeon


organism_name: Thermoproteota archaeon


organism_name: Desulfurococcaceae archaeon


organism_name: Candidatus Anstonellales archaeon


organism_name: archaeon


organism_name: Salmonella enterica


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Candidatus Micrarchaeia archaeon


organism_name: Thermoplasmata archaeon


organism_name: Metallosphaera sp.


organism_name: Candidatus Pacearchaeota archaeon


organism_name: Candidatus Bilamarchaeaceae archaeon


organism_name: Thermoplasmatales archaeon


organism_name: Nitrososphaerales archaeon


organism_name: Hadarchaeum sp. (SeqCode)


organism_name: Candidatus Nitrosocaldus sp.


organism_name: Candidatus Caldarchaeum sp.


organism_name: Nitrososphaeria archaeon


organism_name: Nitrososphaerota archaeon


organism_name: Candidatus Anstonellaceae archaeon


organism_name: Candidatus Anstonellales archaeon


organism_name: Methanothermobacter sp.


organism_name: Thermoproteota archaeon


organism_name: Archaeoglobaceae archaeon


organism_name: Candidatus Bathyarchaeia archaeon


organism_name: Candidatus Micrarchaeia archaeon


asm_submitter: Universidad Nacional de Villa Maria

organism_name: Bacillus thuringiensis


organism_name: Candidatus Pacearchaeota archaeon


organism_name: Candidatus Jordarchaeales archaeon


organism_name: Sulfolobales archaeon


organism_name: Zestosphaera sp.


organism_name: Desulfurococcaceae archaeon


organism_name: Salmonella enterica


organism_name: Thermofilum sp.


organism_name: Candidatus Iainarchaeum sp.


organism_name: Candidatus Nezhaarchaeales archaeon


organism_name: Campylobacter coli


organism_name: Acidilobaceae archaeon


organism_name: Thermofilaceae archaeon


organism_name: Ignisphaera sp.


organism_name: Nitrososphaerota archaeon


organism_name: Candidatus Anstonellaceae archaeon


organism_name: Thermosphaera sp.


organism_name: Pyrobaculum sp.


organism_name: Candidatus Bathyarchaeia archaeon


organism_name: Archaeoglobaceae archaeon


organism_name: Thermoplasmata archaeon


organism_name: Candidatus Korarchaeum sp.


organism_name: Thermoproteota archaeon


organism_name: Desulfurococcaceae archaeon


organism_name: Zestosphaera sp.


organism_name: Methanothermobacter sp.


organism_name: Thermofilum sp.


organism_name: Sulfolobales archaeon


organism_name: Acidilobaceae archaeon


organism_name: Thermofilaceae archaeon


organism_name: Nitrososphaeria archaeon


organism_name: Nanopusillaceae archaeon


organism_name: Ignisphaera sp.


organism_name: Fervidicoccaceae archaeon


organism_name: Candidatus Woesearchaeota archaeon


organism_name: Candidatus Bathyarchaeia archaeon


organism_name: Candidatus Caldarchaeum sp.


organism_name: Pyrobaculum sp.


organism_name: Archaeoglobaceae archaeon


organism_name: Candidatus Korarchaeum sp.


organism_name: Candidatus Methanomethylicia archaeon


organism_name: Desulfurococcaceae archaeon


organism_name: Nitrososphaerota archaeon


organism_name: Salmonella enterica


organism_name: Candidatus Nezhaarchaeales archaeon


organism_name: Shigella flexneri


organism_name: Thermofilaceae archaeon


organism_name: Thermosphaera sp.


organism_name: Candidatus Jordarchaeales archaeon


organism_name: Thermofilum sp.


organism_name: Zestosphaera sp.


organism_name: Sulfolobales archaeon


organism_name: Ignisphaera sp.


organism_name: Acidilobaceae archaeon


organism_name: Pyrobaculum sp.


organism_name: Candidatus Woesearchaeota archaeon


organism_name: Candidatus Iainarchaeum sp.


organism_name: Candidatus Nitrosocaldus sp.


organism_name: Candidatus Anstonellales archaeon


organism_name: Candidatus Caldarchaeum sp.


organism_name: Candidatus Nitrosocaldaceae archaeon


organism_name: Nitrososphaerota archaeon


organism_name: Thermoplasmatales archaeon


organism_name: Metallosphaera sp.


organism_name: Candidatus Nitrosotenuis sp.


organism_name: Thermoplasmata archaeon


organism_name: Desulfurococcaceae archaeon


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Shigella sonnei


organism_name: Shigella flexneri


organism_name: Candidatus Bilamarchaeaceae archaeon


organism_name: Candidatus Micrarchaeia archaeon


organism_name: Candidatus Pacearchaeota archaeon


organism_name: Candidatus Woesearchaeota archaeon


organism_name: Candidatus Anstonellaceae archaeon


organism_name: Candidatus Altarchaeota archaeon


organism_name: Candidatus Caldarchaeum sp.


organism_name: Candidatus Nitrosocaldaceae archaeon


organism_name: Candidatus Nitrosocaldus sp.


organism_name: Candidatus Iainarchaeum sp.


organism_name: Nitrososphaerota archaeon


organism_name: Candidatus Anstonellales archaeon


organism_name: Thermoplasmata archaeon


organism_name: Sulfolobales archaeon


organism_name: Saccharolobus sp.


organism_name: Thermofilum sp.


organism_name: Thermofilaceae archaeon


organism_name: Ignisphaera sp.


organism_name: Desulfurococcaceae archaeon


organism_name: Nanopusillaceae archaeon


organism_name: Candidatus Nezhaarchaeales archaeon


organism_name: Acidilobaceae archaeon


organism_name: Pyrobaculum sp.


organism_name: Candidatus Micrarchaeaceae archaeon


organism_name: Ferroplasma sp.


organism_name: Thermosphaera sp.


organism_name: Candidatus Parvarchaeum sp.


organism_name: Zestosphaera sp.


organism_name: Nitrososphaerota archaeon


organism_name: Thermoplasmatales archaeon


organism_name: Sulfolobales archaeon


organism_name: Halalkalicoccus sp.


organism_name: Thermofilum sp.


organism_name: Nanoarchaeales archaeon


organism_name: Saccharolobus sp.


organism_name: Metallosphaera sp.


organism_name: Desulfurococcaceae archaeon


organism_name: Sulfolobaceae archaeon


organism_name: Thermoplasmata archaeon


organism_name: Acidilobaceae archaeon


organism_name: Thermoproteus sp.


organism_name: Ignisphaera sp.


organism_name: Candidatus Nezhaarchaeales archaeon


organism_name: Thermosphaera sp.


organism_name: Thermofilaceae archaeon


organism_name: Nanopusillaceae archaeon


organism_name: Zestosphaera sp.


organism_name: Archaeoglobaceae archaeon


organism_name: Pyrobaculum sp.


organism_name: Nitrososphaeria archaeon


organism_name: Candidatus Thorarchaeota archaeon


organism_name: Candidatus Bathyarchaeia archaeon


organism_name: Hadarchaeum sp. (SeqCode)


organism_name: Nitrososphaerales archaeon


organism_name: Candidatus Woesearchaeota archaeon


organism_name: Nitrososphaerota archaeon


organism_name: Candidatus Iainarchaeum sp.


organism_name: Candidatus Bilamarchaeaceae archaeon


organism_name: Candidatus Pacearchaeota archaeon


organism_name: Candidatus Nitrosocaldus sp.


organism_name: Candidatus Nanoarchaeia archaeon


organism_name: Candidatus Caldarchaeum sp.


organism_name: Candidatus Anstonellales archaeon


organism_name: Fervidicoccaceae archaeon


organism_name: Desulfurococcaceae archaeon


organism_name: Sulfolobales archaeon


organism_name: Candidatus Jordarchaeales archaeon


organism_name: Nanopusillaceae archaeon


organism_name: Acidilobaceae archaeon


organism_name: Archaeoglobaceae archaeon


organism_name: Ignisphaera sp.


organism_name: Zestosphaera sp.


organism_name: Thermofilum sp.


organism_name: Thermosphaera sp.


organism_name: Thermofilaceae archaeon


organism_name: Thermoproteota archaeon


organism_name: Candidatus Nezhaarchaeales archaeon


organism_name: Pyrobaculum sp.


organism_name: Nitrososphaerota archaeon


organism_name: Salmonella enterica


organism_name: Candidatus Pacearchaeota archaeon


organism_name: Candidatus Methanosuratincola sp.


organism_name: Candidatus Bathyarchaeia archaeon


organism_name: Sulfolobales archaeon


organism_name: Desulfurococcaceae archaeon


organism_name: Candidatus Iainarchaeum sp.


organism_name: Candidatus Woesearchaeota archaeon


organism_name: Candidatus Anstonellaceae archaeon


organism_name: Candidatus Caldarchaeum sp.


organism_name: Candidatus Nitrosocaldus sp.


organism_name: Candidatus Bilamarchaeaceae archaeon


organism_name: Acidilobaceae archaeon


organism_name: Ignisphaera sp.


organism_name: Thermofilum sp.


organism_name: Zestosphaera sp.


organism_name: Thermosphaera sp.


organism_name: Archaeoglobaceae archaeon


organism_name: Thermofilaceae archaeon


organism_name: Nanopusillaceae archaeon


organism_name: Pyrobaculum sp.


organism_name: Sulfolobales archaeon


organism_name: Thermoplasmata archaeon


organism_name: Desulfurococcaceae archaeon


organism_name: Candidatus Nitrosocaldaceae archaeon


organism_name: Candidatus Woesearchaeota archaeon


organism_name: Candidatus Caldarchaeum sp.


organism_name: Nitrososphaerota archaeon


organism_name: Candidatus Anstonellales archaeon


organism_name: Nitrososphaerales archaeon


organism_name: Candidatus Nitrosocaldus sp.


asm_submitter: INRAE

organism_name: Collimonas rhizosphaerae

refseq_category: reference genome

relation_to_type_material: assembly from type material


organism_name: Hadarchaeales archaeon (SeqCode)


organism_name: Candidatus Bathyarchaeia archaeon


organism_name: Candidatus Nezhaarchaeales archaeon


organism_name: Sulfolobaceae archaeon


organism_name: Saccharolobus sp.


organism_name: Acidilobaceae archaeon


organism_name: Sulfolobales archaeon


organism_name: Thermosphaera sp.


organism_name: Desulfurococcaceae archaeon


organism_name: Thermoplasmatales archaeon


organism_name: Ignisphaera sp.


organism_name: Candidatus Jordarchaeales archaeon


organism_name: Nitrososphaerota archaeon


organism_name: Thermoplasmata archaeon


organism_name: Metallosphaera sp.


organism_name: Zestosphaera sp.


organism_name: Archaeoglobaceae archaeon


organism_name: Thermofilaceae archaeon


organism_name: Nanopusillaceae archaeon


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome

organism_name: Pyrobaculum sp.


organism_name: Candidatus Nezhaarchaeales archaeon


organism_name: Thermofilum sp.


organism_name: Acidilobaceae archaeon


asm_submitter: Interamerican University of Puerto Rico, Barranquitas campus

organism_name: Pseudomonas sp.


asm_submitter: TCI Co., Ltd.

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Limosilactobacillus fermentum


asm_submitter: University of Sao Paulo

excluded_from_refseq: unverified source organism

organism_name: Priestia sp. WB3


organism_name: Metabacillus indicus


organism_name: Priestia megaterium


organism_name: Bacillus subtilis


organism_name: Niallia taxi


organism_name: Priestia sp. SB1


asm_submitter: Assam University

organism_name: Enterobacter roggenkampii


asm_submitter: University Hospital of Antwerp

organism_name: Enterococcus faecalis


organism_name: Enterococcus faecium


asm_submitter: INSTITUTO POLITECNICO NACIONAL - CICATA Queretaro

infraspecific_name: strain=CM-CNRG TB177

organism_name: Thermoanaerobacter sp. CM-CNRG TB177


asm_submitter: PRINCIPLES OF MICROBIAL ECOSYSTEMS

organism_name: Pacificibacter sp. AS14


organism_name: Celeribacter marinus


organism_name: Sulfitobacter sp. AS59


organism_name: Sulfitobacter sp. AS92


organism_name: Ahrensia kielensis


organism_name: Henriciella sp. AS95


organism_name: Roseibium sp. AS2


organism_name: Hoeflea sp. AS16


organism_name: Hoeflea sp. AS60


organism_name: Shewanella frigidimarina


organism_name: Pseudocolwellia sp. AS88


organism_name: Pseudoalteromonas neustonica


organism_name: Paraglaciecola mesophila


organism_name: Pseudoalteromonas fuliginea


organism_name: Pseudoalteromonas sp. AS84


organism_name: Pseudoalteromonas sp. AS71


organism_name: Pseudoalteromonas arctica


organism_name: Neptuniibacter pectenicola


excluded_from_refseq: genus undefined

organism_name: Gammaproteobacteria bacterium AS21


organism_name: Olleya sp. AS48


organism_name: Psychroserpens sp. AS72


asm_submitter: Instituto Adolfo Lutz

organism_name: Salmonella enterica subsp. enterica serovar Typhi


asm_submitter: UNIVERSITY OF THE BASQUE COUNTRY UPV/EHU UPV/EHU

organism_name: Aliarcobacter cryaerophilus


organism_name: Aliarcobacter butzleri


asm_submitter: Chinese Academy of Agricultural Sciences

organism_name: Aerococcus viridans


asm_submitter: Hangzhou Medical University

organism_name: Klebsiella pneumoniae


asm_submitter: China National Centre for Food Safety Risk Assessment

organism_name: Vibrio parahaemolyticus


asm_submitter: The James Hutton Institute

organism_name: Burkholderia sp. JPY481


organism_name: Paraburkholderia unamae


organism_name: Paraburkholderia ferrariae


organism_name: Paraburkholderia guartelaensis


organism_name: Paraburkholderia azotifigens


organism_name: Cupriavidus oxalaticus


organism_name: Paraburkholderia sabiae


organism_name: Paraburkholderia sp. JHI2823


organism_name: Paraburkholderia phymatum


organism_name: Cupriavidus taiwanensis


organism_name: Paraburkholderia diazotrophica


organism_name: Paraburkholderia sp. JHI869


organism_name: Paraburkholderia caribensis


excluded_from_refseq: genome length too large

organism_name: Paraburkholderia phytofirmans


asm_submitter: Korea Polar Research Institute, Republic of Korea

excluded_from_refseq: derived from single cell; from large multi-isolate project

organism_name: Candidatus Nitrotoga sp.


asm_submitter: Istituto Zooprofilattico Sperimentale della Puglia e Basilicata

organism_name: Klebsiella quasipneumoniae


organism_name: Klebsiella variicola


organism_name: Enterobacter kobei


organism_name: Enterobacter ludwigii


organism_name: Enterobacter cloacae


organism_name: Enterobacter hormaechei


organism_name: Escherichia coli


asm_submitter: Explogen LLC


asm_submitter: Universidad del Desarrollo

organism_name: Pseudomonas aeruginosa


organism_name: Klebsiella pneumoniae


asm_submitter: Blokhina Scientific Research Institute of Epidemiology and Microbiology of Nizhny Novgorod

infraspecific_name: strain=NNSm 2795

organism_name: Serratia marcescens


asm_submitter: Madurai Kamaraj University

organism_name: Staphylococcus gallinarum


excluded_from_refseq: derived from single cell; genus undefined

organism_name: Usitatibacteraceae bacterium


organism_name: Burkholderiaceae bacterium


excluded_from_refseq: derived from single cell

organism_name: Rhodoferax sp.


organism_name: Polaromonas sp.


organism_name: Burkholderiales bacterium


organism_name: Nitrosomonadaceae bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Acidimicrobiales bacterium


organism_name: Ilumatobacteraceae bacterium


excluded_from_refseq: derived from single cell; genome length too small

organism_name: Microbacterium profundi


organism_name: Pseudarthrobacter sp.


organism_name: Candidatus Nanopelagicaceae bacterium


organism_name: Candidatus Planktophila sp.


excluded_from_refseq: derived from single cell; from large multi-isolate project; genus undefined

organism_name: Candidatus Nanopelagicales bacterium


organism_name: Gaiella sp.


organism_name: Gaiellaceae bacterium


organism_name: Gaiellales bacterium


organism_name: Minisyncoccia bacterium