annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: National Center for Biotechnology Information

assembly_level: Contig

assembly_type: haploid

excluded_from_refseq: from large multi-isolate project

genome_rep: Full

group: bacteria

organism_name: Neisseria meningitidis

release_type: Major

version_status: latest


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Klebsiella pneumoniae


organism_name: Klebsiella aerogenes


organism_name: Escherichia coli


asm_submitter: Makerere University


asm_submitter: German Federal Institute for Risk Assessment

organism_name: Bordetella avium

paired_asm_comp: identical


asm_submitter: Universidad Autonoma del Estado de Morelos

assembly_level: Scaffold

excluded_from_refseq: annotation fails completeness check

organism_name: Pseudoalteromonas sp. B5MOD-1


asm_submitter: National Center for Genetic Engineering and Biotechnology (BIOTEC)

organism_name: Actinomycetospora aeridis

refseq_category: reference genome

relation_to_type_material: assembly from type material


organism_name: Actinomycetospora flava


organism_name: Actinomycetospora aurantiaca


asm_submitter: Northwest A&F University

organism_name: Saccharothrix sp. CCNWYY140


organism_name: Sphingopyxis sp. CCNWLW8


organism_name: Paenarthrobacter sp. CCNWLY172


organism_name: Saccharothrix sp. CCNWLW140


organism_name: Lysobacter sp. CCNWLW52


organism_name: Allobosea sp. CCNWLW174


organism_name: Nocardioides sp. CCNWLW212


organism_name: Pseudomonas sp. CCNWLW250


organism_name: Pseudoxanthomonas sp. CCNWLW251


organism_name: Neisseria meningitidis


asm_submitter: Lycoming College

infraspecific_name: strain=LRB

organism_name: Iodobacter sp. LRB


excluded_from_refseq: genus undefined

organism_name: Comamonadaceae bacterium PP-2


organism_name: Pedobacter panaciterrae


organism_name: Acinetobacter sp. NS-4


organism_name: Caulobacter sp. CCG-8


organism_name: Pedobacter sp. GR22-6


asm_submitter: Zurita & Zurita Laboratorios

organism_name: Klebsiella pneumoniae


organism_name: Enterobacter hormaechei


asm_submitter: University of Valencia

organism_name: Vibrio vulnificus


asm_submitter: Blokhina Scientific Research Institute of Epidemiology and Microbiology of Nizhny Novgorod

infraspecific_name: strain=NNSp 2751

organism_name: Streptococcus pneumoniae


asm_submitter: South China Agricultural University

organism_name: Pseudomonas bubulae


organism_name: Escherichia coli


asm_submitter: Jiangsu Normal University

infraspecific_name: strain=KLBMP 9759

organism_name: Actinomycetes bacterium KLBMP 9759


asm_submitter: CDC

organism_name: Salmonella enterica


isolate: M23763_Neisseria meningitidis


isolate: M23817_Neisseria meningitidis


isolate: M22175_Neisseria meningitidis


isolate: M22164_Neisseria meningitidis


isolate: M22157_Neisseria meningitidis


isolate: M22163_Neisseria meningitidis


isolate: M22161_Neisseria meningitidis


isolate: M22159_Neisseria meningitidis


isolate: M21953_Neisseria meningitidis


asm_submitter: Noguchi Memorial Institute for Medical Research

organism_name: Staphylococcus aureus


asm_submitter: Nanjing Agricultural University

organism_name: Acinetobacter baumannii


isolate: M21952_Neisseria meningitidis

organism_name: Neisseria meningitidis


asm_submitter: Yunnan University

infraspecific_name: strain=YIM 133350

organism_name: Rathayibacter sp. YIM 133350


asm_submitter: National Center for Biotechnology Information

isolate: M29036_Neisseria meningitidis


isolate: M29035_Neisseria meningitidis


isolate: M29026_Neisseria meningitidis


isolate: M29034_Neisseria meningitidis


isolate: M29091_Neisseria meningitidis


asm_submitter: Zhejiang University School of Medicine

organism_name: Ureaplasma urealyticum


organism_name: Ureaplasma parvum


isolate: M29090_Neisseria meningitidis


isolate: M29088_Neisseria meningitidis


isolate: M29089_Neisseria meningitidis


isolate: M29087_Neisseria meningitidis


isolate: M29085_Neisseria meningitidis


isolate: M29086_Neisseria meningitidis


isolate: M29119_Neisseria meningitidis


isolate: M29097_Neisseria meningitidis


isolate: M29084_Neisseria meningitidis


isolate: M22229_Neisseria meningitidis


isolate: M22220_Neisseria meningitidis


isolate: M22236_Neisseria meningitidis


isolate: M22228_Neisseria meningitidis


isolate: M22218_Neisseria meningitidis


isolate: M22217_Neisseria meningitidis


isolate: M22179_Neisseria meningitidis


isolate: M22216_Neisseria meningitidis


isolate: M22177_Neisseria meningitidis


isolate: M22178_Neisseria meningitidis


isolate: M22818_Neisseria meningitidis


isolate: M22824_Neisseria meningitidis


isolate: M22823_Neisseria meningitidis


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


isolate: M22825_Neisseria meningitidis


isolate: M22826_Neisseria meningitidis


isolate: M22830_Neisseria meningitidis


asm_submitter: Shanxi Medical University

organism_name: Allobrachymonas wangyanguii


isolate: M22829_Neisseria meningitidis


isolate: M22662_Neisseria meningitidis


asm_submitter: Makerere University


isolate: M22817_Neisseria meningitidis


isolate: M22827_Neisseria meningitidis


isolate: M22652_Neisseria meningitidis


isolate: M22653_Neisseria meningitidis


isolate: M22654_Neisseria meningitidis


isolate: M22656_Neisseria meningitidis


isolate: M22655_Neisseria meningitidis


isolate: M22658_Neisseria meningitidis


isolate: M28978_Neisseria meningitidis


isolate: M22657_Neisseria meningitidis


isolate: M28977_Neisseria meningitidis


isolate: M28976_Neisseria meningitidis


isolate: M28975_Neisseria meningitidis


isolate: M28981_Neisseria meningitidis


isolate: M28979_Neisseria meningitidis


isolate: M28982_Neisseria meningitidis


isolate: M28980_Neisseria meningitidis


asm_submitter: Agharkar Research Institute

infraspecific_name: strain=MCC 0223

organism_name: Lacticaseibacillus casei


infraspecific_name: strain=MCC 0225

organism_name: Limosilactobacillus fermentum


isolate: M29049_Neisseria meningitidis


isolate: M29048_Neisseria meningitidis


isolate: M29045_Neisseria meningitidis


isolate: M29042_Neisseria meningitidis


isolate: M22294_Neisseria meningitidis


isolate: M19586_Neisseria meningitidis


isolate: M19056_Neisseria meningitidis


isolate: M12754_Neisseria meningitidis


isolate: M12749_Neisseria meningitidis


isolate: M18880_Neisseria meningitidis


isolate: M18882_Neisseria meningitidis


isolate: M18881_Neisseria meningitidis


isolate: M18883_Neisseria meningitidis


isolate: M27471_Neisseria meningitidis


isolate: M27459_Neisseria meningitidis


isolate: M27458_Neisseria meningitidis


isolate: M27267_Neisseria meningitidis


isolate: M26315_Neisseria meningitidis


isolate: M26313_Neisseria meningitidis


isolate: M26314_Neisseria meningitidis


isolate: M26265_Neisseria meningitidis


isolate: M26312_Neisseria meningitidis


isolate: M28967_Neisseria meningitidis


isolate: M28964_Neisseria meningitidis


isolate: M28968_Neisseria meningitidis


isolate: M28972_Neisseria meningitidis


isolate: M28971_Neisseria meningitidis


isolate: M28969_Neisseria meningitidis


isolate: M28970_Neisseria meningitidis


isolate: M28973_Neisseria meningitidis


isolate: M28974_Neisseria meningitidis


isolate: M27483_Neisseria meningitidis


isolate: M27489_Neisseria meningitidis


isolate: M27493_Neisseria meningitidis


isolate: M27482_Neisseria meningitidis


isolate: M27491_Neisseria meningitidis


isolate: M27703_Neisseria meningitidis


isolate: M27704_Neisseria meningitidis


isolate: M27712_Neisseria meningitidis


isolate: M22438_Neisseria meningitidis


isolate: M22403_Neisseria meningitidis


isolate: M22351_Neisseria meningitidis


isolate: M22353_Neisseria meningitidis


isolate: M22348_Neisseria meningitidis


isolate: M22431_Neisseria meningitidis


isolate: M22426_Neisseria meningitidis


organism_name: Klebsiella pneumoniae


isolate: M29037_Neisseria meningitidis


isolate: M29041_Neisseria meningitidis


isolate: M29039_Neisseria meningitidis


isolate: M22831_Neisseria meningitidis


isolate: M22839_Neisseria meningitidis


isolate: M22841_Neisseria meningitidis


isolate: M22845_Neisseria meningitidis


isolate: M22842_Neisseria meningitidis


isolate: M22844_Neisseria meningitidis


isolate: M23162_Neisseria meningitidis


isolate: M23421_Neisseria meningitidis


isolate: M22482_Neisseria meningitidis


isolate: M22442_Neisseria meningitidis


isolate: M22543_Neisseria meningitidis


isolate: M22449_Neisseria meningitidis


isolate: M22439_Neisseria meningitidis


isolate: M22440_Neisseria meningitidis


isolate: M22480_Neisseria meningitidis


isolate: M22481_Neisseria meningitidis


isolate: M22453_Neisseria meningitidis


isolate: M24771_Neisseria meningitidis


isolate: M22479_Neisseria meningitidis


isolate: M24250_Neisseria meningitidis


isolate: M24251_Neisseria meningitidis


isolate: M23980_Neisseria meningitidis


isolate: M24249_Neisseria meningitidis


isolate: M22758_Neisseria meningitidis


isolate: M22764_Neisseria meningitidis


isolate: M22682_Neisseria meningitidis


isolate: M22663_Neisseria meningitidis


isolate: M22686_Neisseria meningitidis


isolate: M22669_Neisseria meningitidis


isolate: M22744_Neisseria meningitidis


isolate: M22711_Neisseria meningitidis


isolate: M22689_Neisseria meningitidis


isolate: M22688_Neisseria meningitidis


isolate: M28917_Neisseria meningitidis


isolate: M28126_Neisseria meningitidis


isolate: M28555_Neisseria meningitidis


isolate: M28919_Neisseria meningitidis


isolate: M28938_Neisseria meningitidis


isolate: M28916_Neisseria meningitidis


isolate: M28918_Neisseria meningitidis


isolate: M28954_Neisseria meningitidis


isolate: M27732_Neisseria meningitidis


isolate: M27713_Neisseria meningitidis


isolate: M27811_Neisseria meningitidis


isolate: M27820_Neisseria meningitidis


isolate: M27789_Neisseria meningitidis


isolate: M27822_Neisseria meningitidis


isolate: M27846_Neisseria meningitidis


isolate: M27885_Neisseria meningitidis


isolate: M22290_Neisseria meningitidis


isolate: M22291_Neisseria meningitidis


isolate: M22286_Neisseria meningitidis


isolate: M22276_Neisseria meningitidis


isolate: M22287_Neisseria meningitidis


isolate: M22297_Neisseria meningitidis


isolate: M22327_Neisseria meningitidis


isolate: M29082_Neisseria meningitidis


isolate: M29081_Neisseria meningitidis


isolate: M25437_Neisseria meningitidis


isolate: M25838_Neisseria meningitidis


isolate: M25428_Neisseria meningitidis


isolate: M25244_Neisseria meningitidis


isolate: M25868_Neisseria meningitidis


isolate: M21920_Neisseria meningitidis


isolate: M21738_Neisseria meningitidis


isolate: M21295_Neisseria meningitidis


isolate: M21432_Neisseria meningitidis


isolate: M21454_Neisseria meningitidis


isolate: M21590_Neisseria meningitidis


isolate: M21503_Neisseria meningitidis


isolate: M21718_Neisseria meningitidis


isolate: M29121_Neisseria meningitidis


isolate: M29122_Neisseria meningitidis


isolate: M29132_Neisseria meningitidis


isolate: M29123_Neisseria meningitidis


isolate: M29139_Neisseria meningitidis


isolate: M29138_Neisseria meningitidis


isolate: M22275_Neisseria meningitidis


isolate: M22273_Neisseria meningitidis


isolate: M22270_Neisseria meningitidis


isolate: M22238_Neisseria meningitidis


isolate: M22249_Neisseria meningitidis


isolate: M22244_Neisseria meningitidis


isolate: M22237_Neisseria meningitidis


isolate: M22243_Neisseria meningitidis


isolate: M22242_Neisseria meningitidis


isolate: M22812_Neisseria meningitidis


isolate: M22805_Neisseria meningitidis


isolate: M22784_Neisseria meningitidis


isolate: M22782_Neisseria meningitidis


isolate: M22798_Neisseria meningitidis


isolate: M22796_Neisseria meningitidis


isolate: M22795_Neisseria meningitidis


isolate: M22800_Neisseria meningitidis


isolate: M22799_Neisseria meningitidis


isolate: M29017_Neisseria meningitidis


isolate: M29003_Neisseria meningitidis


isolate: M29004_Neisseria meningitidis


isolate: M29005_Neisseria meningitidis


isolate: M29018_Neisseria meningitidis


isolate: M28995_Neisseria meningitidis


isolate: M28996_Neisseria meningitidis


isolate: M28997_Neisseria meningitidis


isolate: M19898_Neisseria meningitidis


isolate: M21294_Neisseria meningitidis


isolate: M20957_Neisseria meningitidis


isolate: M26059_Neisseria meningitidis


isolate: M25981_Neisseria meningitidis


isolate: M26087_Neisseria meningitidis


isolate: M26021_Neisseria meningitidis


isolate: M26088_Neisseria meningitidis


isolate: M26089_Neisseria meningitidis


isolate: M26093_Neisseria meningitidis


isolate: M26251_Neisseria meningitidis


isolate: M26242_Neisseria meningitidis


isolate: M28953_Neisseria meningitidis


isolate: M27796_Neisseria meningitidis


asm_submitter: Helmholtz Centre for Infection Research

excluded_from_refseq: derived from metagenome

organism_name: Prevotella sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: bacterium


excluded_from_refseq: derived from metagenome; genus undefined


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Duodenibacillus sp.


organism_name: Coprococcus sp.


organism_name: Mitsuokella jalaludinii


organism_name: Desulfovibrio sp.


organism_name: Sodaliphilus sp.


group: archaea

organism_name: archaeon


organism_name: Oribacterium sp.


organism_name: Holdemanella sp.


organism_name: Ruminococcus sp.


organism_name: Neisseria meningitidis


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Allocoprococcus comes


organism_name: Paraprevotella clara


organism_name: Parabacteroides distasonis


organism_name: Parabacteroides merdae


organism_name: Bacteroides salyersiae


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Mediterraneibacter faecis


organism_name: bacterium


organism_name: Prevotella sp.


organism_name: Duodenibacillus sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genome length too small

organism_name: Ruminococcus bromii


organism_name: Sutterella wadsworthensis


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Clostridium sp.


organism_name: Enterocloster sp.


organism_name: Bacteroides thetaiotaomicron


organism_name: Roseburia inulinivorans


organism_name: Gemmiger qucibialis


organism_name: Dialister invisus


organism_name: Merdimonas faecis


organism_name: Anaerotignum lactatifermentans


asm_submitter: Health Protection Agency

organism_name: Listeria monocytogenes


organism_name: Escherichia coli


organism_name: Neisseria meningitidis


organism_name: Shigella flexneri


asm_submitter: College of Resource and Environment

assembly_level: Complete Genome

organism_name: Streptomyces nigra


asm_submitter: Zhejiang University

organism_name: Gordonia polyisoprenivorans


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


asm_submitter: FDA

infraspecific_name: strain=FSIS 210097864


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar O rough


asm_submitter: Institute of Biochemistry and Biophysics, Polish Academy of Sciences

organism_name: Lacticaseibacillus paracasei


organism_name: Salmonella enterica


infraspecific_name: strain=FSIS 210093107


asm_submitter: Universidad Autonoma del Estado de Morelos

organism_name: Pseudoalteromonas sp. C12FD-1


asm_submitter: Korea Polar Research Institute

organism_name: Roseomonas mucosa


asm_submitter: Korea Research Institue of Bioscience a

organism_name: Lactobacillus gasseri


organism_name: Lactiplantibacillus plantarum


organism_name: Serratia marcescens


organism_name: Limosilactobacillus reuteri


asm_submitter: Lawrence Berkeley National Laboratory

organism_name: Bacillus subtilis subsp. subtilis str. 168


annotation_name: Annotation submitted by MOKWON UNIVERSITY

annotation_provider: MOKWON UNIVERSITY

asm_submitter: MOKWON UNIVERSITY

organism_name: Myxococcus stipitatus


asm_submitter: Wayne State University

organism_name: Staphylococcus aureus


asm_submitter: Institute of Microbiology, National Academy of Sciences of Belarus

organism_name: Streptomyces netropsis

relation_to_type_material: assembly from heterotypic synonym type material


organism_name: Escherichia coli


organism_name: Shigella flexneri


asm_submitter: Vet-LIRN-CVM-FDA


asm_submitter: NJ DOH Public Health Laboratories microbial pathogen submission group

organism_name: Vibrio parahaemolyticus


asm_submitter: National Center for Biotechnology Information

organism_name: Neisseria meningitidis


isolate: M22284_Neisseria meningitidis


asm_submitter: Royal Netherlands Institute for Sea Research

organism_name: Halorubrum lacusprofundi


asm_submitter: University of Groningen

organism_name: Faecalibacterium taiwanense


asm_submitter: Marian University College

organism_name: Citrobacter freundii


asm_submitter: Universidade Federal de Minas Gerais

organism_name: Escherichia coli O22:H8


organism_name: Klebsiella quasipneumoniae


asm_submitter: Hainan University

organism_name: Bacillus sp. XZ-5


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


asm_submitter: Jiangsu Normal University

infraspecific_name: strain=KLBMP 9797

organism_name: Actinomycetes bacterium KLBMP 9797


asm_submitter: HUTECH University

organism_name: Bacillus tropicus


asm_submitter: Academician I.N.Blokhina Nizhny Novgorod Scientific Research Institute of Epidemiology and Microbiol


asm_submitter: Centre of Biotechnology of Sfax

organism_name: Paenibacillus polymyxa


asm_submitter: University Hospital Puerta del Mar

organism_name: Campylobacter jejuni


asm_submitter: College of Basic Medical Science

organism_name: Acinetobacter pittii


organism_name: Pseudomonas aeruginosa


asm_submitter: Shanxi Medical University

organism_name: Allobrachymonas wangyanguii


asm_submitter: TCI Co., Ltd.

organism_name: Heyndrickxia faecalis


asm_submitter: University of Minho

organism_name: Staphylococcus capitis


asm_submitter: Health Protection Agency

organism_name: Listeria monocytogenes


asm_submitter: FDA

organism_name: Salmonella enterica


asm_submitter: Helmholtz Centre for Infection Research

organism_name: Prevotella sp.


organism_name: Clostridium sp.


organism_name: Bifidobacterium sp.


asm_submitter: CDC

organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Prevotellaceae bacterium


organism_name: bacterium


organism_name: Escherichia coli


organism_name: Catenibacterium sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; genome length too small

organism_name: Roseburia inulinivorans


organism_name: Faecalibacterium sp.


organism_name: Olsenella sp.


organism_name: Eubacteriales bacterium


organism_name: Enterocloster sp.


organism_name: Anaerovibrio sp.


organism_name: Phascolarctobacterium succinatutens


organism_name: Lachnospira eligens


organism_name: Alistipes putredinis


organism_name: Phocaeicola vulgatus


organism_name: Absicoccus sp.


organism_name: Fusobacterium gonidiaformans


organism_name: Bifidobacterium adolescentis


organism_name: Fusobacterium mortiferum


organism_name: Roseburia hominis


organism_name: Salmonella enterica


organism_name: Dysosmobacter sp.


organism_name: Megasphaera sp.


organism_name: bacterium


organism_name: Schaalia turicensis


organism_name: Bacteroides sp.


organism_name: Succinivibrio sp.


organism_name: Prevotella sp.


organism_name: Listeria monocytogenes


organism_name: Prevotella pectinovora


organism_name: Shigella sonnei


organism_name: Shigella flexneri


organism_name: Butyricimonas faecalis


organism_name: Mitsuokella jalaludinii


organism_name: Escherichia coli


organism_name: Prevotellamassilia sp.


organism_name: Victivallis vadensis


organism_name: Duodenibacillus massiliensis


organism_name: Duodenibacillus sp.


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; genome length too small

organism_name: Leyella stercorea


organism_name: Parabacteroides sp.


organism_name: bacterium


organism_name: Alistipes shahii


organism_name: Acidaminococcus timonensis


organism_name: Prevotella sp.


organism_name: Oribacterium sp.


organism_name: archaeon


organism_name: Escherichia coli O153:H7


organism_name: Desulfovibrio sp.


organism_name: Shigella sonnei


organism_name: Dialister histaminiformans


organism_name: Shigella flexneri


organism_name: Dialister sp.


organism_name: Escherichia coli


organism_name: Salmonella enterica


organism_name: Prevotella pectinovora


organism_name: Faecalibacterium sp.


organism_name: Duodenibacillus sp.


organism_name: Roseburia faecis


organism_name: Phascolarctobacterium succinatutens


organism_name: Faecalibacterium prausnitzii


organism_name: bacterium


organism_name: Roseburia sp.


organism_name: Prevotella sp.


organism_name: Lachnospiraceae bacterium


organism_name: Roseburia intestinalis


asm_submitter: National Center for Biotechnology Information

organism_name: Neisseria meningitidis


organism_name: Roseburia inulinivorans


organism_name: Segatella sp.


organism_name: Segatella copri


organism_name: Prevotellamassilia sp.


organism_name: Barnesiella intestinihominis


organism_name: Segatella hominis


organism_name: Coprobacter fastidiosus


organism_name: Bifidobacterium adolescentis


organism_name: Phocaeicola vulgatus


organism_name: Allocoprococcus comes


organism_name: Holdemanella biformis


organism_name: bacterium


organism_name: Gemmiger sp.


organism_name: Alistipes ihumii


organism_name: Bacteroides uniformis


organism_name: Vescimonas sp.


organism_name: Gemmiger qucibialis


organism_name: Alistipes putredinis


organism_name: [Eubacterium] siraeum


organism_name: Dysosmobacter sp.


organism_name: Sutterella wadsworthensis


organism_name: Coprococcus sp.


organism_name: Gemmiger formicilis


organism_name: Methanobrevibacter smithii


organism_name: Butyricimonas virosa


organism_name: Phascolarctobacterium succinatutens


organism_name: Sodaliphilus sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Gallintestinimicrobium sp.


organism_name: Lachnospiraceae bacterium


organism_name: Alistipes indistinctus


organism_name: bacterium


organism_name: Hallella sp.


organism_name: Anaerotignum faecicola


organism_name: Alistipes finegoldii


organism_name: Bilophila wadsworthia


organism_name: Parabacteroides merdae


organism_name: Bacteroides stercoris


organism_name: Agathobacter rectalis


organism_name: Angelakisella sp.


organism_name: Dysosmobacter welbionis


organism_name: Odoribacter splanchnicus


organism_name: Alistipes sp.


organism_name: Clostridium sp.


organism_name: Roseburia intestinalis


organism_name: Parabacteroides distasonis


organism_name: Gemmiger sp.


organism_name: Alistipes dispar


organism_name: Prevotellamassilia sp.


organism_name: Segatella copri


organism_name: bacterium


organism_name: Treponema sp.


organism_name: Prevotella sp.


organism_name: Anaerovibrio sp.


organism_name: Roseburia inulinivorans


organism_name: Dysosmobacter sp.


organism_name: Phascolarctobacterium succinatutens


organism_name: Faecalibacterium sp.


organism_name: Mitsuokella jalaludinii


organism_name: Sodaliphilus sp.


organism_name: [Lactobacillus] rogosae


organism_name: Prevotella pectinovora


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small; genus undefined

organism_name: [Eubacterium] siraeum


organism_name: Gemmiger formicilis


organism_name: Angelakisella sp.


organism_name: Megasphaera sp.


organism_name: Acidaminococcus timonensis


organism_name: Duodenibacillus sp.


organism_name: bacterium


organism_name: Prevotella sp.


organism_name: Dialister sp.


organism_name: Butyrivibrio sp.


organism_name: Catenibacterium mitsuokai


organism_name: Vescimonas sp.


organism_name: Dysosmobacter sp.


organism_name: Prevotellamassilia timonensis


organism_name: Sutterella sp.


organism_name: Roseburia faecis


organism_name: Clostridiaceae bacterium


organism_name: Roseburia sp.


organism_name: Bacteroides stercoris


organism_name: Alistipes onderdonkii


organism_name: Dialister invisus


organism_name: Bacteroides uniformis


organism_name: Agathobacter rectalis


organism_name: Escherichia coli


organism_name: Parabacteroides distasonis


organism_name: Bacteroides fragilis


organism_name: Phocaeicola vulgatus


organism_name: bacterium


organism_name: Acidaminococcus intestini


organism_name: Akkermansia muciniphila


organism_name: Faecalibacterium sp.


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Faecalibacterium prausnitzii


organism_name: Parabacteroides merdae


organism_name: Lachnospiraceae bacterium


organism_name: Bacteroides salyersiae


organism_name: Odoribacter splanchnicus


organism_name: Segatella copri


organism_name: Ruminococcus sp.


organism_name: [Lactobacillus] rogosae


organism_name: Vescimonas sp.


organism_name: Gemmiger sp.


organism_name: Prevotella sp.


organism_name: Dialister sp.


organism_name: Gemmiger formicilis


organism_name: Mitsuokella jalaludinii


organism_name: Dysosmobacter sp.


organism_name: Roseburia faecis


organism_name: Prevotella pectinovora


organism_name: Segatella sp.


organism_name: Sutterella wadsworthensis


organism_name: Segatella hominis


organism_name: Oribacterium sp.


organism_name: bacterium


organism_name: Acidaminococcus intestini


organism_name: Clostridium sp.


organism_name: Mailhella sp.


organism_name: Paraprevotella clara


organism_name: Enterocloster sp.


organism_name: Prevotellamassilia timonensis


organism_name: Prevotella sp.


organism_name: [Ruminococcus] lactaris


organism_name: Faecalibacterium sp.


organism_name: Bacteroides caccae


organism_name: Alistipes onderdonkii


organism_name: Bacteroides stercoris


organism_name: Phascolarctobacterium sp.


organism_name: Flavonifractor plautii


organism_name: Mesosutterella multiformis


organism_name: Coprococcus sp.


organism_name: bacterium


organism_name: Gemmiger formicilis


organism_name: Phocaeicola dorei


organism_name: Agathobacter rectalis


organism_name: Parabacteroides distasonis


organism_name: Alistipes inops


organism_name: Dysosmobacter welbionis


organism_name: Parasutterella excrementihominis


organism_name: Lachnospira sp.


organism_name: Parabacteroides merdae


organism_name: Gemmiger qucibialis


organism_name: Butyricimonas virosa


organism_name: Fusicatenibacter saccharivorans


organism_name: Bacteroides uniformis


organism_name: Faecalibacterium prausnitzii


organism_name: Alistipes finegoldii


organism_name: Akkermansia muciniphila


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Barnesiella intestinihominis


organism_name: Sutterella wadsworthensis


organism_name: Alistipes communis


excluded_from_refseq: contaminated; annotation fails MAG completeness check; derived from metagenome

organism_name: Ruminococcus bromii


organism_name: Mitsuokella jalaludinii


organism_name: Segatella sp.


organism_name: Prevotella sp.


organism_name: Segatella copri


organism_name: Segatella hominis


organism_name: bacterium


organism_name: Allocoprococcus comes


organism_name: Megasphaera sp.


organism_name: Prevotellamassilia sp.


organism_name: Agathobacter rectalis


organism_name: Dialister sp.


organism_name: Succinivibrio sp.


organism_name: Acidaminococcus intestini


organism_name: Anaerovibrio sp.


organism_name: Dorea longicatena


organism_name: Oribacterium sp.


organism_name: Collinsella aerofaciens


organism_name: Prevotellamassilia timonensis


organism_name: Anaerotignum faecicola


organism_name: Salmonella enterica


organism_name: Prevotella sp.


organism_name: Shigella flexneri


organism_name: Roseburia sp.


organism_name: Sutterella wadsworthensis


organism_name: Faecalibacterium prausnitzii


organism_name: Lachnospiraceae bacterium


asm_submitter: FDA/CFSAN

organism_name: Listeria monocytogenes


organism_name: Ureaplasma sp.


organism_name: bacterium


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Waltera sp.


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Agathobacter rectalis


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Enterocloster sp.


organism_name: Roseburia inulinivorans


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Faecalibacterium sp.


organism_name: Bifidobacterium longum


organism_name: Acinetobacter baumannii


organism_name: Sutterella wadsworthensis


organism_name: Klebsiella pneumoniae


asm_submitter: Utah Public Health Laboratory Infectious Disease submission group


organism_name: Vescimonas sp.


organism_name: Alistipes onderdonkii


organism_name: Alistipes shahii


organism_name: Lachnospira eligens


organism_name: Salmonella enterica


organism_name: bacterium


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Odoribacter splanchnicus


organism_name: Klebsiella aerogenes


organism_name: Lachnospiraceae bacterium


organism_name: Phascolarctobacterium faecium


organism_name: Alistipes putredinis


organism_name: Bacteroides eggerthii


organism_name: Roseburia faecis


organism_name: Fusicatenibacter saccharivorans


organism_name: Shigella flexneri


organism_name: Gemmiger formicilis


organism_name: Escherichia coli


organism_name: Phocaeicola vulgatus


organism_name: Bacteroides uniformis


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


organism_name: Shigella sonnei


organism_name: Faecalibacterium prausnitzii


organism_name: Parabacteroides merdae


organism_name: Bacteroides caccae


organism_name: Klebsiella oxytoca


organism_name: Dysosmobacter sp.


organism_name: Proteus mirabilis


organism_name: bacterium


organism_name: Bacteroides ovatus


organism_name: Alistipes finegoldii


organism_name: Gallintestinimicrobium sp.


organism_name: Klebsiella pneumoniae


organism_name: Sutterella wadsworthensis


organism_name: Alistipes onderdonkii


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Enterobacter hormaechei


organism_name: Alistipes shahii


organism_name: Ruminococcus sp.


organism_name: Acinetobacter baumannii


organism_name: Gemmiger qucibialis


organism_name: Escherichia coli


organism_name: Clostridium sp.


organism_name: Roseburia sp.


organism_name: Parabacteroides distasonis


organism_name: bacterium


organism_name: Barnesiella intestinihominis


organism_name: Eubacterium sp.


organism_name: Alistipes communis


organism_name: Faecalibacterium sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Salmonella enterica


organism_name: Bacteroides cellulosilyticus


organism_name: Phocaeicola vulgatus


organism_name: Odoribacter splanchnicus


organism_name: Bacteroides caccae


organism_name: Butyricicoccus sp.


organism_name: Lachnospiraceae bacterium


organism_name: Lachnospira sp.


organism_name: Escherichia coli


organism_name: Roseburia hominis


organism_name: Gemmiger qucibialis


organism_name: Oscillospiraceae bacterium


organism_name: Alistipes putredinis


organism_name: bacterium


organism_name: Dialister invisus


organism_name: Vescimonas sp.


organism_name: Gemmiger sp.


organism_name: Gallintestinimicrobium sp.


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica


organism_name: Dysosmobacter sp.


organism_name: Shigella sonnei


organism_name: Alistipes senegalensis


organism_name: Coprococcus sp.


organism_name: Shigella flexneri


organism_name: Prevotella sp.


organism_name: Phocaeicola vulgatus


organism_name: Escherichia coli


organism_name: Alistipes shahii


organism_name: Phocaeicola coprophilus


organism_name: Phascolarctobacterium faecium


organism_name: Gemmiger formicilis


organism_name: Flavonifractor plautii


organism_name: Ruminococcus sp.


organism_name: Bacteroides stercoris


organism_name: Vibrio parahaemolyticus


organism_name: Salmonella enterica


organism_name: Parabacteroides distasonis


organism_name: Evtepia gabavorous


organism_name: Sutterella wadsworthensis


organism_name: Bifidobacterium adolescentis


organism_name: Dialister hominis


organism_name: Enterocloster sp.


organism_name: Collinsella sp.


isolate: ISOLATE

organism_name: Acinetobacter baumannii


organism_name: Vescimonas sp.


organism_name: Acidaminococcus intestini


organism_name: Waltera sp.


organism_name: [Ruminococcus] lactaris


organism_name: Segatella sp.


organism_name: Fusicatenibacter saccharivorans


organism_name: Faecalibacterium prausnitzii


organism_name: Mediterraneibacter torques


organism_name: Salmonella enterica


organism_name: Alistipes finegoldii


organism_name: Bacteroides caccae


organism_name: Bacteroides uniformis


organism_name: Dysosmobacter welbionis


organism_name: Parabacteroides merdae


organism_name: Alistipes putredinis


organism_name: Escherichia coli


organism_name: Agathobacter rectalis


organism_name: Gemmiger qucibialis


organism_name: Bacteroides fragilis


organism_name: Enterocloster sp.


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


excluded_from_refseq: unverified source organism; derived from metagenome; fragmented assembly; genus undefined

organism_name: Clostridiaceae bacterium


organism_name: Clostridium sp.


organism_name: bacterium


organism_name: Alistipes onderdonkii


organism_name: Bilophila wadsworthia


organism_name: Desulfovibrio piger


organism_name: Parasutterella excrementihominis


organism_name: Faecalibacterium prausnitzii


excluded_from_refseq: from large multi-isolate project


organism_name: Klebsiella pneumoniae


organism_name: Evtepia gabavorous


organism_name: [Eubacterium] siraeum


organism_name: Acinetobacter baumannii


organism_name: Parabacteroides merdae


organism_name: Bacteroides eggerthii


organism_name: Lachnospiraceae bacterium


organism_name: Fusicatenibacter saccharivorans


organism_name: Klebsiella variicola


organism_name: Phocaeicola vulgatus


organism_name: Ruminococcus sp.


organism_name: Alistipes shahii


organism_name: Bacteroides fragilis


organism_name: bacterium


organism_name: Bacteroides salyersiae


organism_name: Parabacteroides distasonis


organism_name: Clostridium sp.


organism_name: Salmonella enterica


organism_name: Phascolarctobacterium succinatutens


organism_name: Klebsiella pneumoniae


organism_name: Bacteroides uniformis


organism_name: Faecalibacterium sp.


organism_name: Sodaliphilus sp.


organism_name: Gemmiger formicilis


organism_name: Citrobacter freundii


organism_name: Phocaeicola plebeius


organism_name: Enterobacter cloacae


organism_name: Prevotella sp.


organism_name: Oscillospiraceae bacterium


organism_name: Lachnospira eligens


organism_name: bacterium


organism_name: Bacteroides thetaiotaomicron


organism_name: Klebsiella michiganensis


organism_name: Clostridiaceae bacterium


organism_name: Enterocloster sp.


organism_name: Roseburia faecis


organism_name: Salmonella enterica


organism_name: Parabacteroides merdae


organism_name: Clostridium sp.


organism_name: Eubacteriales bacterium


organism_name: Faecalibacterium sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Parabacteroides distasonis


organism_name: Phocaeicola plebeius


organism_name: Lachnospiraceae bacterium


organism_name: Alistipes putredinis


organism_name: Lachnospira sp.


organism_name: Bacteroides uniformis


organism_name: Bacteroides ovatus


organism_name: Anaerotignum faecicola


organism_name: Bifidobacterium adolescentis


organism_name: Sutterella wadsworthensis


organism_name: Roseburia sp.


organism_name: Agathobacter rectalis


organism_name: Dialister invisus


organism_name: Gemmiger formicilis


organism_name: Shigella flexneri


organism_name: Phocaeicola dorei


organism_name: Gemmiger qucibialis


organism_name: Bifidobacterium longum


organism_name: Ruminiclostridium sp.


organism_name: Faecalibacterium sp.


organism_name: Alistipes senegalensis


organism_name: bacterium


organism_name: Parabacteroides distasonis


organism_name: Oscillospiraceae bacterium


organism_name: Holdemanella sp.


organism_name: Salmonella enterica


organism_name: Shigella sonnei


organism_name: Senegalimassilia faecalis


organism_name: Lachnospira eligens


organism_name: Escherichia coli


organism_name: Faecalibacterium prausnitzii


organism_name: Agathobacter rectalis


organism_name: Shigella flexneri


organism_name: Odoribacter splanchnicus


organism_name: Bifidobacterium adolescentis


organism_name: [Clostridium] leptum


organism_name: Mesosutterella multiformis


organism_name: Dysosmobacter sp.


organism_name: Bacteroides ovatus


organism_name: Angelakisella sp.


organism_name: Acinetobacter baumannii


organism_name: bacterium


asm_submitter: New Jersey Department of Agriculture


organism_name: Salmonella enterica


organism_name: Bacteroides uniformis


organism_name: Roseburia sp.


organism_name: Waltera sp.


organism_name: Alistipes sp.


organism_name: Akkermansia muciniphila


organism_name: Bilophila wadsworthia


organism_name: Lachnospiraceae bacterium


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Alistipes onderdonkii


organism_name: Ruminococcus sp.


organism_name: Alistipes finegoldii


organism_name: Coprococcus sp.


organism_name: Phocaeicola vulgatus


organism_name: Escherichia coli


organism_name: Fusicatenibacter saccharivorans


organism_name: Gemmiger formicilis


organism_name: bacterium


organism_name: Bacteroides uniformis


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Kiambu


organism_name: Parabacteroides merdae


organism_name: Shigella flexneri


organism_name: Roseburia faecis


organism_name: Clostridium sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Gemmiger sp.


organism_name: Gemmiger qucibialis


organism_name: Phocaeicola plebeius


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Faecalibacterium sp.


organism_name: Eubacteriales bacterium


organism_name: Parabacteroides distasonis


organism_name: Phascolarctobacterium faecium


organism_name: Lachnospiraceae bacterium


organism_name: bacterium


organism_name: Lachnospira sp.


organism_name: Bacteroides caccae


organism_name: Bacteroides fragilis


organism_name: Phocaeicola vulgatus


organism_name: Allocoprococcus comes


organism_name: Succinivibrio sp.


organism_name: Prevotella sp.


organism_name: Anaerovibrio sp.


organism_name: Segatella copri


organism_name: Enterocloster sp.


organism_name: Prevotellamassilia sp.


organism_name: Mitsuokella jalaludinii


organism_name: Sodaliphilus sp.


organism_name: Segatella sp.


organism_name: Sutterella wadsworthensis


asm_submitter: Biology Meets Subduction, Deep Carbon Observatory

organism_name: Rickettsiella sp.


organism_name: Caldilineae bacterium


organism_name: Prevotella pectinovora


organism_name: Duodenibacillus massiliensis


organism_name: Nitrososphaera sp.


organism_name: Acidobacteriota bacterium


organism_name: Desulfobacteraceae bacterium


organism_name: Hydrogenophilales bacterium


organism_name: Planctomycetota bacterium


organism_name: Chloroflexota bacterium


organism_name: Anaerolineae bacterium


organism_name: bacterium


organism_name: Roseateles sp.


organism_name: Draconibacterium sp.


organism_name: Deltaproteobacteria bacterium


organism_name: Candidatus Bathyarchaeota archaeon


organism_name: Nitrospirota bacterium


organism_name: Burkholderiales bacterium


organism_name: Candidatus Bipolaricaulota bacterium


organism_name: Verrucomicrobiales bacterium


organism_name: Acidobacteriaceae bacterium


organism_name: Candidatus Nitrosotenuis sp.


organism_name: Candidatus Woesearchaeota archaeon


organism_name: Nevskiaceae bacterium


organism_name: Acidobacteriota bacterium


organism_name: Thermoflexus sp.


organism_name: Marinilabiliaceae bacterium


organism_name: Candidatus Veblenbacteria bacterium


organism_name: Methanobacteriota archaeon


organism_name: Armatimonadota bacterium


organism_name: Candidatus Fraserbacteria bacterium


organism_name: Sphingobacteriaceae bacterium


organism_name: Ignavibacteria bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Candidatus Falkowiibacteriota bacterium


organism_name: Myxococcales bacterium


organism_name: Ignavibacterium sp.


organism_name: Meiothermus sp.


organism_name: Chloroflexota bacterium


organism_name: Gemmatimonadota bacterium


organism_name: Nitrospira sp.


organism_name: Syntrophobacterales bacterium


organism_name: Acidithiobacillus sp.


organism_name: Candidatus Nomurabacteria bacterium


organism_name: Prolixibacter sp.


organism_name: Rhodocyclales bacterium


organism_name: Pirellula sp.


organism_name: Candidatus Uhrbacteria bacterium


organism_name: Coprothermobacterota bacterium


organism_name: Chlorobiota bacterium


organism_name: Candidatus Aminicenantota bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Candidatus Bathyarchaeota archaeon


organism_name: Desulfurellales bacterium


organism_name: Nitrospirota bacterium


organism_name: Chloroflexota bacterium


organism_name: Clostridiales bacterium


organism_name: Actinomycetota bacterium


organism_name: Nitrososphaerota archaeon


organism_name: Thermoflexales bacterium


organism_name: Solibacteraceae bacterium


organism_name: Candidatus Fraserbacteria bacterium


organism_name: Arcobacter sp.


organism_name: Microcaldota archaeon


organism_name: Acidobacteriota bacterium


organism_name: bacterium


organism_name: Dehalococcoidales bacterium


organism_name: Anaerolineae bacterium


organism_name: Candidatus Aenigmatarchaeota archaeon


organism_name: Microcoleaceae cyanobacterium bin_387


organism_name: Candidatus Iainarchaeum sp.


organism_name: Caldilineae bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Chloroflexota bacterium


organism_name: Burkholderiales bacterium


organism_name: Armatimonadota bacterium


organism_name: Nitrospirota bacterium


organism_name: Fischerella thermalis ESF170215


organism_name: Ignavibacteria bacterium


organism_name: Nitrososphaera sp.


organism_name: Caldifarciminota bacterium


organism_name: Candidatus Aminicenantota bacterium


organism_name: Acidobacteriota bacterium


organism_name: Myxococcales bacterium


organism_name: Candidatus Cloacimonadota bacterium


organism_name: Verrucomicrobiia bacterium


organism_name: Salinivirgaceae bacterium


organism_name: Candidatus Iainarchaeum sp.


organism_name: Bacteroidota bacterium


organism_name: Gemmatimonadota bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Anaeromyxobacter sp.


organism_name: Actinomycetota bacterium


organism_name: Burkholderiales bacterium


organism_name: Anaerolineaceae bacterium


organism_name: Planctomycetales bacterium


organism_name: Ignavibacteriales bacterium


organism_name: Syntrophobacterales bacterium


organism_name: Candidatus Aminicenantota bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Candidatus Zixiibacteriota bacterium


organism_name: Chloroflexota bacterium


organism_name: Candidatus Moraniibacteriota bacterium


organism_name: Candidatus Roizmanbacteria bacterium


organism_name: Leptospirillum sp.


organism_name: Bacteroidales bacterium


organism_name: Ferroplasma sp.


organism_name: bacterium


organism_name: Anaerolineae bacterium


organism_name: Nitrospiraceae bacterium


organism_name: Exiguobacterium sp.


organism_name: Desulfobacteraceae bacterium


organism_name: Caldimonas sp.


organism_name: Chthonomonadales bacterium


organism_name: Myxococcales bacterium


organism_name: Nitrospirota bacterium


organism_name: Candidatus Solibacter sp.


organism_name: Acinetobacter indicus


organism_name: Chloroflexota bacterium


organism_name: Candidatus Bipolaricaulota bacterium


organism_name: Sphingomonas sp.


organism_name: Rheinheimera sp.


organism_name: Armatimonadota bacterium


organism_name: Nitrososphaerales archaeon


organism_name: Acidobacteriota bacterium


organism_name: Planctomycetaceae bacterium


organism_name: Burkholderiales bacterium


organism_name: Methylomirabilis sp. (SeqCode)


organism_name: Deltaproteobacteria bacterium


organism_name: Bellilinea sp.


organism_name: Rhodospirillales bacterium


organism_name: Oscillatoriales cyanobacterium bin_317


organism_name: Candidatus Omnitrophota bacterium


organism_name: Desulfobacteraceae bacterium


organism_name: Terriglobales bacterium


organism_name: Nitrospirota bacterium


organism_name: Draconibacterium sp.


organism_name: Anaeromyxobacter sp.


organism_name: archaeon


organism_name: Actinomycetota bacterium


organism_name: Sulfurihydrogenibium sp.


organism_name: Hydrogenophilales bacterium


organism_name: Candidatus Woesearchaeota archaeon


organism_name: Acidobacteriota bacterium


organism_name: Candidatus Fraserbacteria bacterium


organism_name: Ignavibacteriales bacterium


organism_name: Clostridiales bacterium


organism_name: Chloroflexota bacterium


organism_name: Chthonomonadales bacterium


organism_name: Methanocellales archaeon


organism_name: Thermoflexales bacterium


organism_name: Nitrososphaerota archaeon


organism_name: Nitrospiraceae bacterium


organism_name: bacterium


organism_name: Flavobacteriales bacterium


organism_name: Leptospiraceae bacterium


organism_name: Caldimicrobium sp.


organism_name: Sphingobacteriales bacterium


organism_name: Acinetobacter junii


organism_name: Planctomycetales bacterium


organism_name: Rubrivivax sp.


organism_name: Armatimonadota bacterium


organism_name: Anaeromyxobacteraceae bacterium


organism_name: Acidobacteriota bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Desulfarculaceae bacterium


organism_name: Lentimicrobiaceae bacterium


organism_name: Candidatus Rokuibacteriota bacterium


organism_name: Archangiaceae bacterium


organism_name: Ignavibacteriales bacterium


organism_name: Candidatus Omnitrophota bacterium


organism_name: Terriglobales bacterium


organism_name: Chloroflexota bacterium


organism_name: Cytophagales bacterium


organism_name: Betaproteobacteria bacterium


organism_name: Actinomycetota bacterium


organism_name: Chloroflexia bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Caldifarciminota bacterium


organism_name: Candidatus Moraniibacteriota bacterium


organism_name: Acidobacteriota bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Burkholderiales bacterium


organism_name: Caldilineales bacterium


organism_name: Meiothermus sp.


organism_name: Nitrososphaera sp.


organism_name: bacterium


organism_name: Sulfolobales archaeon


organism_name: Draconibacterium sp.


organism_name: Solibacteraceae bacterium


organism_name: Peptococcaceae bacterium


organism_name: Ignavibacteriales bacterium


organism_name: Chloroflexota bacterium


organism_name: Nitrospirota bacterium


organism_name: Candidatus Aminicenantota bacterium


organism_name: Candidatus Fraserbacteria bacterium


organism_name: Gemmatimonadota bacterium


organism_name: Acidobacteriota bacterium


organism_name: Armatimonadota bacterium


organism_name: Sulfolobaceae archaeon


organism_name: Microcaldota archaeon


organism_name: Thermus sp.


organism_name: Bacteriovoracales bacterium


organism_name: Mycoplasmatota bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Caldifarciminota bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Candidatus Jorgensenbacteria bacterium


organism_name: Ignavibacteriales bacterium


organism_name: Dehalococcoidales bacterium


organism_name: Candidatus Altimarinota bacterium


organism_name: Chloroflexota bacterium


organism_name: Candidatus Aminicenantota bacterium


organism_name: Candidatus Roizmanbacteria bacterium


organism_name: Actinomycetota bacterium


organism_name: bacterium


organism_name: Nitrospirota bacterium


organism_name: Microcaldota archaeon


organism_name: Nitrososphaerales archaeon


organism_name: Nitrospira sp.


organism_name: Rhodospirillales bacterium


organism_name: Syntrophobacterales bacterium


organism_name: Myxococcales bacterium


organism_name: Methylobacillus sp.


organism_name: Candidatus Microgenomates bacterium


organism_name: Candidatus Woesearchaeota archaeon


organism_name: Planctomycetaceae bacterium


organism_name: Hydrogenophilales bacterium


organism_name: Candidatus Wildermuthbacteria bacterium


organism_name: Lewinellaceae bacterium


organism_name: Anaerolineaceae bacterium


organism_name: Nevskiaceae bacterium


organism_name: Spirochaetia bacterium


organism_name: Lentimicrobiaceae bacterium


organism_name: Nitrospirota bacterium


organism_name: Thermoflexales bacterium


organism_name: Bacteroidota bacterium


organism_name: Nitrospira sp.


organism_name: bacterium


organism_name: Chloroflexota bacterium


organism_name: Alishewanella sp.


organism_name: Deltaproteobacteria bacterium


organism_name: Acidobacteriota bacterium


organism_name: Rhodoferax sp.


organism_name: Ignavibacterium sp.


organism_name: Verrucomicrobiales bacterium


organism_name: Armatimonadota bacterium


organism_name: Planctomycetaceae bacterium


organism_name: Actinomycetota bacterium


organism_name: Betaproteobacteria bacterium


organism_name: Rhodospirillaceae bacterium


organism_name: Nitrososphaerales archaeon


organism_name: Ignavibacteria bacterium


organism_name: Planctomycetales bacterium


organism_name: Syntrophobacterales bacterium


organism_name: Nitrospirota bacterium


organism_name: Gallionellaceae bacterium


organism_name: Burkholderiales bacterium


organism_name: Nitrospiraceae bacterium


organism_name: Ignavibacteriales bacterium


organism_name: Caldilineae bacterium


organism_name: Acidobacteriota bacterium


organism_name: Candidatus Fraserbacteria bacterium


organism_name: Myxococcales bacterium


organism_name: Hydrogenophilales bacterium


organism_name: Anaerolineae bacterium


organism_name: Armatimonadota bacterium


organism_name: Coprothermobacterota bacterium


organism_name: Cytophagales bacterium


organism_name: Candidatus Rokuibacteriota bacterium


organism_name: Thiotrichales bacterium


organism_name: Beijerinckiaceae bacterium


organism_name: Bacteroidota bacterium


organism_name: Lentimicrobiaceae bacterium


organism_name: Crocinitomicaceae bacterium


organism_name: Chloroflexota bacterium


organism_name: Gallionellaceae bacterium


organism_name: Sideroxydans sp.


organism_name: Acidobacteriota bacterium


organism_name: Ignavibacteriales bacterium


organism_name: Candidatus Nitrospira inopinata


organism_name: Geminicoccaceae bacterium


organism_name: bacterium


organism_name: Burkholderiales bacterium


organism_name: Paludibacter sp.


organism_name: Deltaproteobacteria bacterium


organism_name: Actinomycetota bacterium


organism_name: Caldilineae bacterium


organism_name: Sunxiuqinia sp.


organism_name: Geothrix sp.


organism_name: Microcaldota archaeon


organism_name: Thiothrix sp.


organism_name: Ignavibacteria bacterium


organism_name: Caldifarciminota bacterium


organism_name: Rhodocyclales bacterium


organism_name: Opitutia bacterium


organism_name: Nitrososphaera sp.


organism_name: Thermotogota bacterium


organism_name: Candidatus Eiseniibacteriota bacterium


organism_name: Thiotrichaceae bacterium


organism_name: Acidobacteriota bacterium


organism_name: Chloroflexota bacterium


organism_name: Elioraea sp.


organism_name: Nitrospirota bacterium


organism_name: Bacteroidales bacterium


organism_name: Thermoflexales bacterium


organism_name: Gallionellaceae bacterium


organism_name: Bacteroidia bacterium


organism_name: Candidatus Peregrinibacteria bacterium


organism_name: Comamonadaceae bacterium


organism_name: Chromobacterium haemolyticum


organism_name: Fibrobacteria bacterium


organism_name: Sphingobacteriaceae bacterium


organism_name: Candidatus Aminicenantota bacterium


organism_name: Anaerotignum faecicola


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Listeria monocytogenes


organism_name: Campylobacter jejuni


asm_submitter: University of KwaZulu Natal

organism_name: Citrobacter braakii


organism_name: Providencia rettgeri


isolate: clinical

organism_name: Acinetobacter baumannii


organism_name: Salmonella enterica


asm_submitter: KY Dept. for Public Health Lab Services

organism_name: Vibrio parahaemolyticus


organism_name: Escherichia coli


organism_name: Shigella flexneri


organism_name: Klebsiella pneumoniae


organism_name: Serratia marcescens


asm_submitter: USDA FSIS


organism_name: Campylobacter coli


asm_submitter: Postgraduate Institute of Medical Education and Research

organism_name: Clostridioides difficile


asm_submitter: National Institute of Infectious Diseases (INEI) - ANLIS DR. CARLOS G. MALBRAN


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: Sidra Medicine


asm_submitter: Kimberly Andrews

organism_name: Mesomycoplasma ovipneumoniae


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


asm_submitter: CDC


asm_submitter: Seoul National University Hospital

organism_name: Erwinia sp. SLM-02


asm_submitter: National Veterinary Research Institute

organism_name: Salmonella enterica subsp. enterica serovar Oranienburg


organism_name: Salmonella enterica subsp. enterica serovar Molade


asm_submitter: Microbial Resistance Group

infraspecific_name: strain=Pol 20


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Brucella abortus


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Escherichia O78:H4


organism_name: Escherichia O24:H4


organism_name: Escherichia O88:H52


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Bovismorbificans


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Klebsiella pneumoniae


asm_submitter: Health Protection Agency

organism_name: Listeria monocytogenes


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


organism_name: Salmonella enterica subsp. enterica


organism_name: Yersinia enterocolitica


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Bredeney


organism_name: Escherichia coli


organism_name: Shigella flexneri


asm_submitter: UFRGS

organism_name: Bacillus altitudinis


asm_submitter: Helmholtz Centre for Infection Research

organism_name: bacterium


organism_name: Prevotellamassilia sp.


organism_name: Dialister sp.


organism_name: Segatella copri


organism_name: Faecalibacterium sp.


organism_name: Prevotella sp.


organism_name: Angelakisella sp.


organism_name: Gemmiger qucibialis


organism_name: Parabacteroides distasonis


organism_name: Phascolarctobacterium succinatutens


organism_name: Desulfovibrio sp.


organism_name: Ruthenibacterium lactatiformans


organism_name: Bacteroides ovatus


organism_name: Enterocloster sp.


organism_name: Enterocloster bolteae


organism_name: Intestinimonas timonensis


organism_name: Alistipes onderdonkii


organism_name: Bacteroides uniformis


organism_name: Escherichia coli


organism_name: Akkermansia muciniphila


organism_name: Mediterraneibacter gnavus


organism_name: Anaerotignum lactatifermentans


organism_name: Bacteroides thetaiotaomicron


organism_name: Bilophila wadsworthia


organism_name: Dysosmobacter welbionis


organism_name: Phocaeicola vulgatus


organism_name: Bacteroides stercoris


organism_name: Flavonifractor plautii


organism_name: Paraprevotella clara


organism_name: Parasutterella sp.


organism_name: Parabacteroides merdae


organism_name: Megasphaera massiliensis


organism_name: Ruminococcus bromii


organism_name: Parabacteroides sp.


organism_name: Coprobacter fastidiosus


organism_name: bacterium


organism_name: [Lactobacillus] rogosae


organism_name: Prevotella sp.


organism_name: Bifidobacterium adolescentis


organism_name: Olsenella sp.


organism_name: Prevotellamassilia sp.


organism_name: Coprococcus sp.


organism_name: Roseburia intestinalis


organism_name: Faecalibacterium prausnitzii


organism_name: Selenomonas sp.


organism_name: Agathobacter rectalis


organism_name: Sodaliphilus sp.


organism_name: Desulfovibrio sp.


organism_name: Eshraghiella crossota


organism_name: Mitsuokella jalaludinii


organism_name: Allocoprococcus comes


organism_name: Acidaminococcus timonensis


organism_name: bacterium


organism_name: Collinsella sp.


organism_name: Dysosmobacter sp.


organism_name: Prevotella sp.


organism_name: Oribacterium sp.


organism_name: Clostridium sp.


organism_name: Ruminococcus sp.


organism_name: Segatella copri


organism_name: Duodenibacillus sp.


organism_name: Lachnospira sp.


organism_name: Faecalibacterium sp.


organism_name: Succinivibrio sp.


organism_name: Segatella hominis


organism_name: Phascolarctobacterium succinatutens


organism_name: Lachnospiraceae bacterium


organism_name: Dialister sp.


organism_name: Anaerovibrio sp.


organism_name: Gemmiger sp.


organism_name: Angelakisella sp.


organism_name: Limosilactobacillus mucosae


organism_name: Bacteroides ovatus


organism_name: Streptococcus parasanguinis


organism_name: bacterium


organism_name: Bifidobacterium longum


organism_name: Sutterella wadsworthensis


organism_name: Mediterraneibacter gnavus


organism_name: Holdemanella sp.


organism_name: Veillonella seminalis


organism_name: Acidaminococcus intestini


organism_name: Roseburia faecis


organism_name: Roseburia intestinalis


organism_name: Phocaeicola vulgatus


organism_name: Ligilactobacillus ruminis


organism_name: Anaerovibrio sp.


organism_name: Coprococcus sp.


organism_name: Dialister sp.


organism_name: Prevotellamassilia sp.


organism_name: Megasphaera sp.


organism_name: Prevotella sp.


organism_name: [Lactobacillus] rogosae


organism_name: bacterium


organism_name: Segatella sp.


organism_name: Lachnospiraceae bacterium


organism_name: Segatella copri


organism_name: Roseburia inulinivorans


organism_name: Lachnospira eligens


organism_name: Faecalibacterium prausnitzii


organism_name: Duodenibacillus sp.


organism_name: Agathobacter rectalis


organism_name: Succinivibrio sp.


organism_name: Roseburia intestinalis


organism_name: Segatella hominis


organism_name: Clostridium sp.


organism_name: Sutterella seckii


organism_name: Acidaminococcus intestini


organism_name: Prevotella sp.


organism_name: Roseburia hominis


organism_name: Roseburia faecis


organism_name: bacterium


organism_name: Mitsuokella jalaludinii


organism_name: Eshraghiella crossota


organism_name: Olsenella sp.


organism_name: Oribacterium sp.


organism_name: Prevotella pectinovora


organism_name: Angelakisella sp.


organism_name: Megasphaera sp.


organism_name: Acidaminococcus fermentans


organism_name: Agathobacter rectalis


organism_name: Prevotellamassilia sp.


organism_name: Gemmiger formicilis


organism_name: Butyrivibrio sp.


organism_name: Bifidobacterium adolescentis


organism_name: Prevotella sp.


organism_name: Gemmiger qucibialis


organism_name: Dysosmobacter sp.


organism_name: bacterium


organism_name: Gemmiger sp.


organism_name: Oscillospiraceae bacterium


organism_name: Coprococcus sp.


organism_name: Segatella copri


organism_name: Dialister sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Segatella hominis


organism_name: Allocoprococcus comes


organism_name: Lachnospira eligens


organism_name: Eubacteriales bacterium


organism_name: Sutterella wadsworthensis


organism_name: Alistipes putredinis


organism_name: Ruminococcus bromii


organism_name: Alistipes finegoldii


organism_name: Lawsonibacter sp.


organism_name: Roseburia sp.


organism_name: bacterium


organism_name: Segatella sp.


organism_name: Prevotella sp.


organism_name: Mediterraneibacter torques


organism_name: Butyricimonas sp.


organism_name: Parabacteroides sp.


organism_name: Gemmiger formicilis


organism_name: Bacteroides uniformis


organism_name: Clostridium sp.


organism_name: Bacteroides ovatus


organism_name: Anaerotignum faecicola


organism_name: Sodaliphilus sp.


organism_name: Flavonifractor sp.


organism_name: Gemmiger qucibialis


organism_name: Suilimivivens sp.


organism_name: Faecalibacterium sp.


organism_name: Segatella copri


organism_name: bacterium


organism_name: Coprococcus sp.


organism_name: Segatella hominis


organism_name: Dorea longicatena


organism_name: Paraprevotella clara


organism_name: Parabacteroides merdae


organism_name: Phascolarctobacterium succinatutens


organism_name: Roseburia faecis


organism_name: Mitsuokella jalaludinii


organism_name: Brachyspira aalborgi


organism_name: Catenibacterium mitsuokai


organism_name: Dialister sp.


organism_name: Duodenibacillus sp.


organism_name: Prevotellamassilia timonensis


organism_name: Prevotella sp.


organism_name: Pseudoruminococcus massiliensis


organism_name: Acidaminococcus timonensis


organism_name: bacterium


organism_name: Roseburia inulinivorans


organism_name: Oscillospiraceae bacterium


organism_name: Oribacterium sp.


organism_name: Ruthenibacterium lactatiformans


organism_name: Agathobacter rectalis


organism_name: Coprococcus sp.


organism_name: Angelakisella sp.


organism_name: Hallella sp.


organism_name: Parabacteroides distasonis


organism_name: Faecalibacterium prausnitzii


organism_name: Jutongia sp.


organism_name: Butyrivibrio sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Faecalibacterium sp.


organism_name: Prevotella sp.


organism_name: Segatella sp.


organism_name: Sutterella wadsworthensis


organism_name: bacterium


organism_name: Lachnospira eligens


organism_name: Lachnospira sp.


organism_name: Roseburia faecis


organism_name: Allocoprococcus comes


organism_name: Bifidobacterium adolescentis


organism_name: Prevotellamassilia sp.


organism_name: Eshraghiella crossota


organism_name: Coprococcus sp.


organism_name: Gemmiger sp.


organism_name: Gemmiger formicilis


organism_name: Roseburia sp.


organism_name: Segatella hominis


organism_name: Clostridium sp.


organism_name: Eubacteriales bacterium


organism_name: Prevotella sp.


organism_name: Prevotella pectinovora


organism_name: Dialister invisus


organism_name: bacterium


organism_name: Bacteroides fragilis


organism_name: Acidaminococcus intestini


organism_name: Faecalibacterium prausnitzii


organism_name: Megasphaera sp.


organism_name: Agathobacter rectalis


organism_name: Bifidobacterium adolescentis


organism_name: Anaerovibrio sp.


organism_name: Coprococcus sp.


organism_name: Fusicatenibacter saccharivorans


organism_name: Allocoprococcus comes


organism_name: Mitsuokella jalaludinii


organism_name: Sutterella wadsworthensis


asm_submitter: Third Institute of Oceanography, Ministry of Natural Resources, P.R.China

organism_name: Galbibacter orientalis


asm_submitter: Freie Universitaet Berlin

organism_name: Vibrio cholerae


asm_submitter: Centers for Disease Control and Prevention

organism_name: Neisseria gonorrhoeae


asm_submitter: zhejiang university

organism_name: Rhodococcus qingshengii


organism_name: Klebsiella pneumoniae


organism_name: Acinetobacter baumannii


asm_submitter: OsloMet

organism_name: Corynebacterium bovis


infraspecific_name: strain=PCRi


organism_name: Corynebacterium mastitidis


infraspecific_name: strain=PCR 32

organism_name: Corynebacterium sp. PCR 32


infraspecific_name: strain=PCRF


organism_name: Corynebacterium accolens


organism_name: Corynebacterium macginleyi


organism_name: Corynebacterium sanguinis


organism_name: Escherichia coli


organism_name: Corynebacterium marquesiae


organism_name: Shigella sonnei


infraspecific_name: strain=PCR 3


organism_name: Corynebacterium propinquum


infraspecific_name: strain=PCR 2


organism_name: Pseudomonas aeruginosa


infraspecific_name: strain=PCR 8


organism_name: Listeria monocytogenes


asm_submitter: Ben Gurion University of the Negev

organism_name: Candidatus Ruminococcus hominiciens


organism_name: Candidatus Ruminococcus primaciens


organism_name: Candidatus Ruminococcus ruminiciens


organism_name: Neisseria gonorrhoeae


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


asm_submitter: FDA


asm_submitter: The Second Affiliated Hospital of Guangzhou University of Chinese Medicine

organism_name: Enterococcus faecium


asm_submitter: Research Institute for Systems Biology and Medicine

organism_name: Klebsiella pneumoniae


excluded_from_refseq: annotation fails completeness check; many frameshifted proteins


assembly_level: Chromosome


asm_submitter: Chinese academy of sciences

organism_name: Alteromonas macleodii


asm_submitter: Cornell University

infraspecific_name: strain=B13/HKI 0402

organism_name: Mycetohabitans endofungorum


infraspecific_name: strain=B14/HKI 0403


annotation_name: Annotation submitted by Georg-August-University Goettingen

annotation_provider: Georg-August-University Goettingen

asm_name: MTBGP

asm_submitter: Georg-August-University Goettingen

infraspecific_name: strain=BGP

organism_name: Neomoorella thermoacetica


asm_name: MTMBA

infraspecific_name: strain=MBA


asm_name: MHLNE

infraspecific_name: strain=LNE

organism_name: Neomoorella humiferrea


asm_name: MHOCP


asm_name: MTKAM

infraspecific_name: strain=KAM


asm_name: MTCOM

infraspecific_name: strain=COM


asm_submitter: Henan Agricultural University

organism_name: Citrobacter braakii


organism_name: Escherichia coli


asm_submitter: Ocean University of China

organism_name: Alteromonas sp. M12


asm_submitter: The First Affiliated Hospital of Zhejiang University


asm_submitter: Yangtze  University

organism_name: Nocardia seriolae


organism_name: Mycetohabitans rhizoxinica


asm_submitter: Chinese Center for Disease Control and Prevention

infraspecific_name: strain=NPRC(S) 01.13900

organism_name: Campylobacter lari


asm_submitter: Anhui Agricultural University

organism_name: Flavobacterium ginsenosidimutans


asm_submitter: China Agricultural University

organism_name: Glaesserella parasuis


asm_submitter: CSIR-IIIM

excluded_from_refseq: out of scope for the RefSeq project

organism_name: Serratia marcescens


asm_submitter: Beijing Forestry University

organism_name: Denitratimonas organivorans


asm_submitter: CDPHE SARS-CoV-2 submissions

organism_name: Neisseria meningitidis


asm_submitter: Kyungpook National University School of Medicine

organism_name: Acinetobacter junii


asm_submitter: Peking Union Medical College Hospital

organism_name: Staphylococcus aureus


asm_submitter: Academician I.N.Blokhina Nizhny Novgorod Scientific Research Institute of Epidemiology and Microbiol

organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: University of Groningen

organism_name: Faecalibacterium wellingii


asm_submitter: Yantai University

organism_name: Cognatishimia coralii


asm_submitter: Research Center of Biotechnology RAS

excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Arcobacteraceae bacterium


organism_name: Spirochaetota bacterium


organism_name: Fimbriimonadales bacterium


organism_name: Anaerolineales bacterium


excluded_from_refseq: derived from metagenome

organism_name: Thermodesulfovibrio sp.


organism_name: Rectinemataceae bacterium


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Thermoanaerobaculia bacterium


organism_name: Anaerolineae bacterium


organism_name: Burkholderiales bacterium


organism_name: Breznakiellaceae bacterium


organism_name: Hydrogenothermaceae bacterium


organism_name: Candidatus Geothermincolales bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Tepidiforma sp.


organism_name: Bacteroidales bacterium


organism_name: Pseudothermotoga sp.


organism_name: Limisphaera sp.


organism_name: Ignavibacterium sp.


organism_name: Thermogemmata sp.


organism_name: Armatimonadota bacterium


organism_name: Desulfomicrobiaceae bacterium


organism_name: Anaerolineales bacterium


organism_name: Acidimicrobiales bacterium


organism_name: Eximiradius proteiniborus


organism_name: Bacteroidota bacterium


organism_name: Hydrogenophilus sp.


organism_name: Candidatus Methanosuratincola sp.


organism_name: Geminicoccaceae bacterium


organism_name: Fervidobacterium sp.


organism_name: Caldilinea sp.


organism_name: Brevinematales bacterium


asm_submitter: Christian-Albrechts-University Kiel

organism_name: Gluconobacter cerinus


organism_name: Pantoea nemavictus


organism_name: Anaerohalosphaeraceae bacterium


organism_name: Pseudomonas sp. MYb398


organism_name: Erwinia sp. MYb535


organism_name: Erwinia sp. MYb375


organism_name: Pseudomonas sp. MYb331


excluded_from_refseq: unverified source organism

organism_name: Enterobacter sp. MYb186


organism_name: Acinetobacter sp. MYb177


organism_name: Acinetobacter johnsonii


organism_name: Brucella pseudogrignonensis


organism_name: Brucella anthropi


organism_name: Comamonas sp. MYb69


organism_name: Erwinia billingiae


organism_name: Ochrobactrum vermis


organism_name: Chryseobacterium culicis


organism_name: Comamonas sp. MYb21


organism_name: Stenotrophomonas indicatrix


organism_name: Acinetobacter guillouiae


organism_name: Sphingomonas molluscorum


organism_name: Pseudomonas sp. MYb330


organism_name: Pseudomonas sp. MYb371


organism_name: Ochrobactrum sp. MYb379


organism_name: Sphingobacterium sp. MYb388


organism_name: Comamonas sp. MYb396


organism_name: Erwinia sp. MYb416


organism_name: Pseudomonas sp. MYb541


organism_name: Gluconobacter albidus


organism_name: Gluconobacter wancherniae


asm_submitter: South China Agricultural University

organism_name: Salmonella enterica subsp. enterica


organism_name: Bryobacteraceae bacterium


organism_name: Desulfobacterales bacterium


organism_name: Thermogutta sp.


organism_name: Desulfobaccales bacterium


organism_name: Thermus sp.


organism_name: bacterium


organism_name: Melioribacteraceae bacterium


organism_name: Bacteroidales bacterium


organism_name: Anaerolineae bacterium


organism_name: Candidatus Bathyarchaeia archaeon


organism_name: Spirochaetota bacterium


organism_name: Caldifarciminota bacterium


organism_name: Desulfosoma sp.


organism_name: Chloroflexus sp.


organism_name: Tenuifilum sp.


organism_name: Fimbriimonadales bacterium


organism_name: Aquificaceae bacterium


organism_name: Ignavibacteria bacterium


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Thermodesulforhabdaceae bacterium


organism_name: Anaerolinea sp.


asm_submitter: Aarhus University

organism_name: Escherichia coli


asm_submitter: University of Science and Technology Beijing

organism_name: Pseudomonas aeruginosa


asm_submitter: Korea Polar Research Institute

organism_name: Gordonia hongkongensis


asm_submitter: Shandong First Medical University

organism_name: Morganella morganii


asm_submitter: Wayne State University

organism_name: Staphylococcus aureus


asm_submitter: Oregon Health and Science University

organism_name: Parvimonas micra


asm_name: Halobacterium salinarum KBTZ02

asm_submitter: Nazarbayev University

organism_name: Halobacterium salinarum


asm_submitter: SPC Group

infraspecific_name: strain=SPC L77-1

organism_name: Pediococcus pentosaceus


asm_submitter: Xinjiang Agricultural University

organism_name: Enterococcus faecalis


organism_name: Ectopseudomonas mendocina


asm_submitter: Institute of Microbiology

organism_name: [Mycoplasma] gypis


organism_name: Mycoplasmopsis felifaucium


asm_submitter: Weifang People's Hospital

organism_name: Citrobacter europaeus


asm_name: BSN155 contigs


asm_submitter: Agriculture and Agri-Food Canada

organism_name: Sinorhizobium meliloti


asm_submitter: Shanxi Medical University

organism_name: Aquabacterium sp. G14


asm_submitter: Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences

organism_name: Pseudokineococcus sp. 5B2Z-1


asm_submitter: University of Exeter

organism_name: Ochrobactrum teleogrylli


organism_name: Stenotrophomonas sp. AB1(2024)


organism_name: Pseudokineococcus sp. 1T1Z-3


organism_name: Variovorax sp. AB1(2024)


infraspecific_name: strain=NBRC 102111

organism_name: Pseudokineococcus marinus


organism_name: Salmonella enterica


asm_submitter: Jeonbuk national university

organism_name: Bifidobacterium thermophilum


asm_submitter: Zhejiang University


infraspecific_name: strain=DSM 103726

organism_name: Pseudokineococcus basanitobsidens


asm_submitter: China CDC

organism_name: Corynebacterium sp. H128


asm_submitter: Bursa Uludag University, Faculty of Veterinary Medicine

organism_name: Aeromonas caviae


organism_name: Corynebacterium sp. H127


asm_submitter: Academician I.N.Blokhina Nizhny Novgorod Scientific Research Institute of Epidemiology and Microbiol

organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: Hankyong National University

organism_name: Paucibacter soli


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Novosphingobium anseongense


organism_name: Paucibacter hankyongi


organism_name: Pedobacter anseongensis


organism_name: Pedobacter immunditicola


asm_submitter: Shanghai Pulmonary Hospital

organism_name: Staphylococcus aureus


infraspecific_name: strain=NewmanDt


asm_submitter: First people hospital of Lianyungang City

organism_name: Vibrio cholerae


infraspecific_name: strain=Newman

organism_name: Staphylococcus aureus subsp. aureus str. Newman


asm_submitter: QUAID-I-AZAM UNIVERSITY ISLAMABAD

infraspecific_name: strain=UPEC ECZMYU21

organism_name: Escherichia coli


asm_submitter: Teaching hospital of Caen Normandy

organism_name: Klebsiella pneumoniae


asm_submitter: Northwest A&F University

organism_name: Chitinophaga sp. CCNWYY40


asm_submitter: Northeast Agricultural University

organism_name: Pseudomonas kermanshahensis


organism_name: Pseudomonas farsensis


organism_name: Caulobacter sp. CCNWYY153


organism_name: Allobosea sp. CCNWYY174


asm_submitter: Public Health England

organism_name: Yersinia enterocolitica


asm_submitter: Health Protection Agency

organism_name: Shigella sonnei


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Shigella boydii


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Escherichia coli


asm_submitter: FDA


asm_submitter: CDC


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


organism_name: Salmonella enterica


isolate: INPUT


organism_name: Vibrio parahaemolyticus


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


asm_submitter: FDA Center for Food Safety and Applied Nutrition


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Pseudomonas aeruginosa


organism_name: Acinetobacter baumannii


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Reading


organism_name: Salmonella enterica subsp. enterica serovar Muenster


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Enterococcus faecalis


organism_name: Shigella flexneri


organism_name: Listeria monocytogenes


organism_name: Klebsiella pneumoniae


asm_submitter: Jeonbuk National University

organism_name: Clostridium perfringens


organism_name: Salmonella enterica


organism_name: Neisseria gonorrhoeae


organism_name: Campylobacter jejuni


organism_name: Escherichia coli


asm_submitter: Vermont Department of Health Laboratory


organism_name: Providencia stuartii


organism_name: Pseudomonas aeruginosa


organism_name: Acinetobacter baumannii


organism_name: Klebsiella aerogenes


isolate: Key


organism_name: Proteus mirabilis


asm_submitter: National Center for Biotechnology Information

organism_name: Neisseria meningitidis


organism_name: Shigella sonnei


organism_name: Listeria innocua


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Listeria monocytogenes


asm_submitter: US Food and Drug Administration


organism_name: Shigella flexneri


organism_name: Clostridium perfringens


organism_name: Salmonella enterica


organism_name: Neisseria gonorrhoeae


organism_name: Klebsiella pneumoniae


organism_name: Escherichia coli


organism_name: Vibrio parahaemolyticus


organism_name: Campylobacter jejuni


excluded_from_refseq: many frameshifted proteins


organism_name: Acinetobacter baumannii


infraspecific_name: strain=MC58 ?siaD ?mutS PorA-ve


asm_submitter: USDA FSIS


organism_name: Campylobacter coli


organism_name: Campylobacter upsaliensis


asm_submitter: University of Dhaka


asm_submitter: Hannam University

organism_name: Gymnodinialimonas ulvae


organism_name: Yoonia sp. 208BN28-4


asm_submitter: Instituto Nacional de Salud


organism_name: Gymnodinialimonas mytili


excluded_from_refseq: annotation fails completeness check


organism_name: Pseudomonas aeruginosa


organism_name: Enterobacter hormaechei


asm_submitter: Istituto Superiore di Sanita'


asm_submitter: Instituto de Agroquimica y Tecnologia de Alimentos (CSIC)

organism_name: Holzapfeliella saturejae


asm_submitter: Health Protection Agency

organism_name: Shigella flexneri


asm_submitter: Technische Universitaet Muenchen

infraspecific_name: strain=TMW 1.142

organism_name: Lactobacillus johnsonii


organism_name: Nicoliella lavandulae


infraspecific_name: strain=TMW 1.617

organism_name: Lactiplantibacillus plantarum


asm_submitter: Yangzhou university

organism_name: Stenotrophomonas maltophilia


organism_name: Escherichia coli


asm_submitter: Norwegian University of Life Sciences

organism_name: Aeromonas salmonicida


infraspecific_name: strain=TMW 1.64


organism_name: Shigella sonnei


organism_name: Aliivibrio salmonicida


asm_submitter: Centers for Disease Control and Prevention

organism_name: Neisseria gonorrhoeae


infraspecific_name: strain=11-Bac 718


excluded_from_refseq: fragmented assembly

organism_name: Psychrobacter sp. 16-Bac2893


infraspecific_name: strain=2-Bac 85

organism_name: Vibrio sp. 2-Bac 85


infraspecific_name: strain=1-Bac 57

organism_name: Vibrio sp. 1-Bac 57


asm_submitter: West China Hospital, Sichuan University

organism_name: Klebsiella pneumoniae


asm_submitter: CDC


asm_submitter: Public Health England

organism_name: Yersinia enterocolitica


organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Salmonella enterica subsp. enterica serovar Newport


asm_submitter: COFEPRIS-CCAYAC

organism_name: Salmonella enterica


asm_submitter: FDA


organism_name: Shigella flexneri


organism_name: Shigella boydii


organism_name: Campylobacter coli


organism_name: Campylobacter lari


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: National Center for Biotechnology Information

organism_name: Neisseria meningitidis


organism_name: Salmonella enterica subsp. enterica serovar Give


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Escherichia coli


asm_submitter: Jeonbuk National University


organism_name: Neisseria gonorrhoeae


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


asm_submitter: USDA FSIS


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Salmonella enterica subsp. enterica serovar Berta


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


organism_name: Salmonella enterica subsp. enterica


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Bredeney


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Escherichia coli


organism_name: Campylobacter jejuni


organism_name: Acinetobacter baumannii


asm_submitter: NJ DOH Public Health Laboratories microbial pathogen submission group

organism_name: Vibrio vulnificus


organism_name: Salmonella enterica


organism_name: Neisseria gonorrhoeae


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Vibrio cholerae


organism_name: Enterobacter hormaechei


organism_name: Shigella boydii


organism_name: Shigella flexneri


organism_name: Shigella sonnei


asm_submitter: South Carolina Dept. of Health & Environmental Control


excluded_from_refseq: unverified source organism; from large multi-isolate project

organism_name: Campylobacter coli


organism_name: Campylobacter upsaliensis


organism_name: Escherichia coli :H4


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Soerenga


organism_name: Escherichia coli


organism_name: Campylobacter jejuni


organism_name: Acinetobacter baumannii


organism_name: Salmonella enterica


organism_name: Neisseria gonorrhoeae


asm_submitter: SENASICA


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Uganda


asm_submitter: US Food and Drug Administration


asm_submitter: FDA Center for Food Safety and Applied Nutrition


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Shigella flexneri


organism_name: Pseudomonas aeruginosa


asm_submitter: Vet-LIRN-CVM-FDA


organism_name: Shigella dysenteriae


asm_submitter: Centers for Disease Control and Prevention


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Cerro


asm_submitter: Vermont Department of Health Laboratory


asm_submitter: CDC


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Shigella sonnei


organism_name: Klebsiella pneumoniae


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Enterobacter ludwigii


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Pseudomonas aeruginosa


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Neisseria gonorrhoeae


organism_name: Salmonella enterica subsp. enterica


organism_name: Salmonella enterica subsp. enterica serovar Gateshead


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: China CDC

organism_name: Corynebacterium sp. H78


organism_name: Corynebacterium sp. H113


organism_name: Corynebacterium sp. H130


asm_submitter: Shandong University

organism_name: Flavonifractor porci


asm_submitter: Hankyong National University

organism_name: Ramlibacter sp. PS3R-8


asm_submitter: Christian-Albrechts-University Kiel


organism_name: Campylobacter jejuni


organism_name: Chryseobacterium sp. MYb328


organism_name: Acinetobacter sp. MYb191


organism_name: Sphingobacterium faecium


organism_name: Campylobacter coli


organism_name: Sphingobacterium sp. MYb382


organism_name: Novosphingobium aquae


organism_name: Listeria monocytogenes


asm_submitter: Hannam University

organism_name: Yoonia sp. 2307UL14-13


organism_name: Ramlibacter sp. PS4R-6


asm_submitter: West China Hospital, Sichuan University

organism_name: Klebsiella pneumoniae


asm_submitter: Ming Chuan University

organism_name: Lactiplantibacillus plantarum


asm_submitter: Jeonbuk National University

organism_name: Escherichia coli


asm_submitter: National Center for Biotechnology Information

organism_name: Neisseria gonorrhoeae


asm_submitter: South China Agricultural University

organism_name: Pseudomonas fragi


asm_submitter: Huazhong Agricultural University

organism_name: Stutzerimonas stutzeri


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Pseudomonas bubulae


asm_submitter: Kyungpook National University

organism_name: Pseudomonas sp. KBN10P05918


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


asm_submitter: USDA FSIS


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Adelaide


organism_name: Shigella flexneri


organism_name: Shigella sonnei


asm_submitter: Centers for Disease Control and Prevention


asm_submitter: FDA Center for Food Safety and Applied Nutrition


organism_name: Pseudomonas sp. KBN06P05117


organism_name: Pseudomonas sp. KBN10P06128


organism_name: Pseudomonas sp. KBN12P06040


organism_name: Escherichia coli


asm_submitter: Academician I.N.Blokhina Nizhny Novgorod Scientific Research Institute of Epidemiology and Microbiol

organism_name: Staphylococcus aureus


organism_name: Neisseria gonorrhoeae


asm_submitter: Forsyth Institute

organism_name: Fusobacterium nucleatum


asm_submitter: Scripps Institution of Oceanography

organism_name: Dethiothermospora halolimnae


organism_name: Fusobacterium necrophorum


excluded_from_refseq: genome length too large


organism_name: Fusobacterium ulcerans


asm_submitter: Health Protection Agency

organism_name: Listeria monocytogenes


organism_name: Campylobacter jejuni


asm_submitter: CDC

organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Campylobacter coli


asm_submitter: University of Southern California

organism_name: Pseudoalteromonas piscicida


organism_name: Brachybacterium paraconglomeratum


asm_submitter: University of Ottawa

organism_name: Nostoc punctiforme UO1


organism_name: Pseudoalteromonas lipolytica


organism_name: Microbacterium esteraromaticum


organism_name: Psychrobacter pacificensis


organism_name: Shewanella bicestrii


organism_name: Leucobacter sp. USCH14


organism_name: Neisseria gonorrhoeae


asm_submitter: University of Calgary

organism_name: Flavobacteriaceae bacterium


organism_name: Exiguobacterium sp. USCH10


organism_name: Corynebacterium sp. USCH3


organism_name: Mycobacterium sp.


asm_submitter: University of Exeter

organism_name: Achromobacter veterisilvae


organism_name: Halioglobus sp.


organism_name: Actinomycetes bacterium


organism_name: Crocinitomicaceae bacterium


organism_name: Pseudomonadales bacterium


organism_name: Octadecabacter sp.


organism_name: Rhodobacter sp.


organism_name: Methanobacteriota archaeon


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome


organism_name: Rhodobacterales bacterium


organism_name: Cryomorphaceae bacterium


organism_name: Microbacteriaceae bacterium


asm_submitter: National Center for Biotechnology Information


organism_name: Opitutales bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Acidimicrobiales bacterium


organism_name: OM182 bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Flavobacteriales bacterium


organism_name: Akkermansiaceae bacterium


organism_name: Candidatus Thioglobus sp.


organism_name: Burkholderiaceae bacterium


organism_name: Emcibacteraceae bacterium


organism_name: Actinomycetes bacterium


organism_name: Candidatus Planktophila sp.


organism_name: Burkholderiales bacterium


organism_name: Methanobacteriota archaeon


organism_name: Oceanospirillaceae bacterium


organism_name: Listeria monocytogenes


organism_name: Neisseria gonorrhoeae


organism_name: Synechococcus sp. ChBW.bin.23


organism_name: SAR86 cluster bacterium


organism_name: Actinomycetota bacterium


organism_name: Opitutaceae bacterium


organism_name: Parasphingorhabdus sp.


organism_name: Saprospiraceae bacterium


organism_name: Paracoccaceae bacterium


organism_name: Crocinitomicaceae bacterium


organism_name: Flavobacteriales bacterium


organism_name: Candidatus Pelagibacterales bacterium


organism_name: Pseudomonas sp.


organism_name: Porticoccus sp.


organism_name: OM182 bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Octadecabacter sp.


organism_name: Akkermansiaceae bacterium


organism_name: Neisseria gonorrhoeae


organism_name: Opitutia bacterium


organism_name: Methanobacteriota archaeon


organism_name: Ilumatobacteraceae bacterium


organism_name: Pseudomonadales bacterium


organism_name: Candidatus Planktophila sp.


organism_name: Pontimonas sp.


organism_name: Synechococcus sp. ChSW.bin.154


organism_name: Alphaproteobacteria bacterium


organism_name: Candidatus Thioglobus sp.


organism_name: Crocinitomicaceae bacterium


organism_name: Bacteroidia bacterium


organism_name: Oceanospirillaceae bacterium


organism_name: Alcaligenes aquatilis


organism_name: Actinomycetes bacterium


organism_name: Burkholderiaceae bacterium


organism_name: Burkholderiales bacterium


organism_name: Neisseria gonorrhoeae


asm_submitter: Anhui University of Science and Technology Affiliated Fengxian hospital ,Shanghai ,China

organism_name: Klebsiella pneumoniae


asm_submitter: Institute of Biochemistry and Physiology of Plants and Microorganisms, Russian Academy of Sciences

organism_name: Sinorhizobium meliloti


asm_submitter: Sichuan University

infraspecific_name: strain=LZW

organism_name: Salmonella enterica


asm_submitter: Jeonbuk National University

organism_name: Escherichia coli


asm_submitter: Hankyong National University

organism_name: Pedobacter superstes


asm_submitter: Zhejiang University School of Medicine

organism_name: Ureaplasma parvum


asm_submitter: Nofima

organism_name: Listeria monocytogenes


asm_submitter: Universtity Hospital Cologne


organism_name: Proteus mirabilis


asm_submitter: Research Center of Biotechnology RAS

organism_name: Natronospora cellulosivora (SeqCode)


asm_submitter: US Food and Drug Administration


asm_submitter: N.F.Gamaleya National Research Center for Epidemiology and Microbiology


asm_submitter: CDC


asm_submitter: University of Sheffield

organism_name: Bradyrhizobium japonicum


organism_name: Sinorhizobium fredii


organism_name: Bradyrhizobium diazoefficiens


asm_submitter: Seattle Children's Research Institute

infraspecific_name: strain=pastiur

organism_name: Mycobacterium tuberculosis variant bovis BCG


infraspecific_name: strain=SA

organism_name: Mycobacterium tuberculosis


asm_submitter: Health Protection Agency


asm_submitter: Fujian Normal University

organism_name: Bacillus tropicus


organism_name: Bacillus velezensis


asm_submitter: WRAIR-Africa


asm_submitter: National Center for Biotechnology Information

organism_name: Neisseria gonorrhoeae


organism_name: Priestia aryabhattai


asm_submitter: University of Calgary

organism_name: SAR86 cluster bacterium


organism_name: Candidatus Planktophila sp.


organism_name: Cryomorphaceae bacterium


organism_name: Akkermansiaceae bacterium


organism_name: Polaribacter sp.


organism_name: Flavobacteriales bacterium


organism_name: Porticoccus sp.


organism_name: Chitinophagales bacterium


organism_name: Amylibacter sp.


organism_name: Crocinitomicaceae bacterium


organism_name: Pontimonas sp.


organism_name: Porticoccaceae bacterium


organism_name: Campylobacter jejuni


organism_name: Comamonadaceae bacterium


organism_name: Ilumatobacter sp.


organism_name: Neisseria gonorrhoeae


organism_name: Saprospiraceae bacterium


organism_name: Paracoccaceae bacterium


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Methylophilales bacterium


organism_name: Octadecabacter sp.


organism_name: Flavobacteriia bacterium


organism_name: Synechococcus sp. ArSW.bin.68


organism_name: Lacinutrix sp.


organism_name: Flavobacteriales bacterium


organism_name: Akkermansiaceae bacterium


organism_name: Oceanospirillaceae bacterium


organism_name: Amylibacter sp.


organism_name: Crocinitomicaceae bacterium


organism_name: Bacteroidota bacterium


asm_submitter: Korea Institute of Geoscience and Mineral Resources

organism_name: Aminobacter sp. Piv2-1


asm_submitter: University of New Hampshire

organism_name: Vibrio parahaemolyticus


organism_name: Neisseria gonorrhoeae


organism_name: Brevundimonas sp. BR2-1


organism_name: Pseudomonas sp. LF-5


asm_submitter: Jeonbuk National University

organism_name: Campylobacter jejuni


organism_name: Klebsiella pneumoniae


organism_name: Escherichia coli


asm_submitter: Vermont Department of Health Laboratory

organism_name: Salmonella enterica


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Klebsiella aerogenes


organism_name: Shigella flexneri


asm_submitter: Centers for Disease Control and Prevention


asm_submitter: Guangdong Women and Children Hospital

organism_name: Corynebacterium parakroppenstedtii


asm_submitter: Ningbo University

organism_name: Leptobacterium meishanense


asm_submitter: Jiangsu University

organism_name: Salinibaculum salinum


organism_name: Ascidiimonas aurantiaca


asm_submitter: Nanjing Agricultural University

organism_name: Streptococcus suis


asm_submitter: Yangzhou university


asm_submitter: Shandong University

organism_name: Maribellus mangrovi


asm_submitter: ningbo university

organism_name: Rhodohalobacter sp. 8-1


organism_name: Enterococcus faecium


organism_name: Neisseria gonorrhoeae


asm_submitter: University of Oxford


asm_submitter: Cong Sun Research Group

organism_name: Paludibacillus litoralis


excluded_from_refseq: fragmented assembly; from large multi-isolate project


asm_submitter: CDC


organism_name: Enterobacter hormaechei subsp. xiangfangensis


organism_name: Campylobacter jejuni


asm_submitter: WRAIR-Africa


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Pelagibius sp. 7325


asm_submitter: NIVIP

infraspecific_name: strain=PD 8567

organism_name: Ralstonia solanacearum


infraspecific_name: strain=PD 7579


infraspecific_name: strain=PD 8566


infraspecific_name: strain=PD 8568


infraspecific_name: strain=PD 7642


infraspecific_name: strain=PD 7397


infraspecific_name: strain=PD 7414