asm_submitter: Croatian Veterinary Institute, Zagreb

organism_name: Campylobacter jejuni


asm_submitter: Virginia Tech

assembly_level: Contig

assembly_type: haploid

excluded_from_refseq: derived from metagenome

genome_rep: Full

group: bacteria

isolate: MAG 488

organism_name: Xylella fastidiosa subsp. fastidiosa

release_type: Major

version_status: latest


asm_submitter: Institute of Oceanology, Chinese Academy of Sciences

organism_name: Bacillus altitudinis

paired_asm_comp: identical


assembly_level: Scaffold

organism_name: Guptibacillus hwajinpoensis


organism_name: Metabacillus halosaccharovorans


organism_name: Staphylococcus warneri


excluded_from_refseq: genus undefined

organism_name: bacterium sp. HQB-150


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: Centers for Disease Control and Prevention

excluded_from_refseq: from large multi-isolate project

organism_name: Neisseria gonorrhoeae


organism_name: Vibrio profundi


organism_name: Vibrio astriarenae


organism_name: Thalassotalea litorea


organism_name: Priestia aryabhattai


organism_name: Pseudomonas putida


organism_name: Cytobacillus oceanisediminis


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Escherichia coli


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Shewanella atlantica


organism_name: Shewanella maritima


organism_name: Shewanella waksmanii


organism_name: Aliivibrio fischeri


organism_name: Shewanella colwelliana


organism_name: Pseudoalteromonas tetraodonis


organism_name: Marinomonas posidonica


organism_name: Vibrio parahaemolyticus


organism_name: Neisseria gonorrhoeae


organism_name: bacterium sp. HQB-39


organism_name: Pseudoalteromonas spongiae


organism_name: Vibrio chagasii


organism_name: Vibrio harveyi


organism_name: Shewanella algae


organism_name: Vibrio maritimus


asm_submitter: University of Minnesota

organism_name: Limosilactobacillus reuteri


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Bacillota bacterium


organism_name: Lachnospiraceae bacterium


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome

organism_name: Turicibacter sp.


organism_name: Qipengyuania sp.


organism_name: Clostridiales bacterium


organism_name: Anaerococcus nagyae


organism_name: Marihabitans sp.


excluded_from_refseq: unverified source organism; derived from metagenome


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Microbacterium sp.


organism_name: Corynebacterium kefirresidentii


organism_name: Neisseria gonorrhoeae


organism_name: Corynebacterium xerosis


organism_name: Butyricicoccus sp.


organism_name: Treponema porcinum


organism_name: Clostridia bacterium


organism_name: Sodaliphilus sp.


organism_name: Prevotella sp.


excluded_from_refseq: derived from metagenome; genome length too large

organism_name: Lactobacillus johnsonii


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Aerococcus urinaeequi


organism_name: Prevotellaceae bacterium


organism_name: Turicibacter sp.


organism_name: Bergeyella zoohelcum


organism_name: Ruminococcus flavefaciens


organism_name: Oscillospiraceae bacterium


organism_name: Clostridiaceae bacterium


organism_name: Clostridiales bacterium


organism_name: Cutibacterium acnes


organism_name: Corynebacterium phoceense


organism_name: Candidatus Cryptobacteroides sp.


organism_name: Anaerococcus nagyae


organism_name: Microbacterium sp.


organism_name: Corynebacterium xerosis


organism_name: Streptococcus alactolyticus


organism_name: Lachnospiraceae bacterium


organism_name: Candidatus Limousia pullorum


organism_name: Globicatella sulfidifaciens


organism_name: Candidatus Limimorpha sp.


organism_name: Prevotellaceae bacterium


organism_name: Limosilactobacillus vaginalis


organism_name: Escherichia coli


organism_name: Oscillospiraceae bacterium


organism_name: Staphylococcus equorum


organism_name: Prevotella sp.


organism_name: Anaerotignum sp.


organism_name: Amphibacillaceae bacterium


organism_name: Candidatus Allocopromorpha sp.


organism_name: Alloiococcus sp.


organism_name: Corynebacterium sp.


organism_name: Clostridiales bacterium


organism_name: Candidatus Kurthia intestinigallinarum


organism_name: Bifidobacterium boum


organism_name: Bergeyella zoohelcum


organism_name: Lactobacillus johnsonii


organism_name: Luteococcus sp.


organism_name: Anaerococcus sp.


organism_name: Jeotgalibaca porci


organism_name: Aerococcaceae bacterium


organism_name: Coriobacteriaceae bacterium


organism_name: Streptococcus dysgalactiae


organism_name: Corynebacterium variabile


organism_name: Bacillota bacterium


organism_name: Atopococcus sp.


organism_name: Evtepia sp.


organism_name: Carnobacteriaceae bacterium


organism_name: Aerococcus suis


organism_name: Parabacteroides distasonis


organism_name: Clostridiales bacterium


organism_name: Corynebacterium glutamicum


organism_name: Ruthenibacterium lactatiformans


organism_name: Corynebacterium sp.


organism_name: Trueperella sp.


organism_name: Rothia sp. (in: high G+C Gram-positive bacteria)


organism_name: Enterococcus hirae


organism_name: Candidatus Cryptobacteroides sp.


organism_name: Oscillospiraceae bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; genome length too small

organism_name: Streptococcus hyovaginalis


organism_name: Clostridium sp.


organism_name: Candidatus Allocopromorpha sp.


organism_name: Bacteroides pyogenes


organism_name: Bacteroides fragilis


organism_name: Neisseria gonorrhoeae


organism_name: Streptococcus lutetiensis


organism_name: Streptococcus pluranimalium


organism_name: Clostridiales bacterium


organism_name: Corynebacterium pollutisoli


organism_name: Limosilactobacillus reuteri


organism_name: Frisingicoccus sp.


organism_name: Atopostipes sp.


organism_name: Sodaliphilus sp.


organism_name: Staphylococcus pettenkoferi


organism_name: Corynebacterium stationis


organism_name: Enterocloster clostridioformis


organism_name: Streptococcus alactolyticus


organism_name: Desulfovibrio piger


organism_name: Aerococcus urinaeequi


organism_name: Butyricimonas virosa


organism_name: Akkermansia muciniphila


asm_submitter: Health Protection Agency

organism_name: Listeria monocytogenes


organism_name: Neisseria gonorrhoeae


organism_name: Bacteroides uniformis


organism_name: Lactobacillus porci


organism_name: Bacillota bacterium


organism_name: Clostridiales bacterium


organism_name: Candidatus Cryptobacteroides sp.


organism_name: Lachnospiraceae bacterium


organism_name: Opitutaceae bacterium


organism_name: Anaerococcus octavius


organism_name: Staphylococcus capitis


organism_name: Corynebacterium xerosis


organism_name: Staphylococcus epidermidis


organism_name: Cutibacterium acnes


organism_name: Marihabitans sp.


organism_name: Lactobacillus amylovorus


organism_name: Jeotgalibaca porci


organism_name: Anaerococcus sp.


organism_name: Neisseria gonorrhoeae


organism_name: Psychrobacter pasteurii


organism_name: Corynebacterium sp.


organism_name: Metalysinibacillus jejuensis


organism_name: Jeotgalicoccus sp.


organism_name: Trueperella sp.


organism_name: Bacillota bacterium


organism_name: Ruminococcus flavefaciens


organism_name: Opitutaceae bacterium


organism_name: Clostridiales bacterium


organism_name: Macrococcoides caseolyticum


organism_name: Butyricicoccus sp.


organism_name: Acinetobacter pseudolwoffii


organism_name: Faucicola boevrei


organism_name: Corynebacterium xerosis


organism_name: Turicibacter sp.


organism_name: Atopostipes sp.


organism_name: Staphylococcus hyicus


organism_name: Cutibacterium acnes


organism_name: Aerococcus sp.


organism_name: Peptoniphilus lacydonensis


organism_name: Staphylococcus hominis


organism_name: Corynebacterium kefirresidentii


organism_name: Cutibacterium granulosum


organism_name: Marmoricola sp.


organism_name: Corynebacterium mucifaciens


organism_name: Anaerococcus sp.


organism_name: Qipengyuania sp.


organism_name: Bacillota bacterium


organism_name: Marihabitans sp.


organism_name: Staphylococcus epidermidis


organism_name: Lactobacillus amylovorus


organism_name: Latilactobacillus sakei


organism_name: Staphylococcus capitis


organism_name: Lachnospiraceae bacterium


organism_name: Aerococcus urinaeequi


organism_name: Anaerococcus nagyae


organism_name: Staphylococcus haemolyticus


organism_name: Lawsonella clevelandensis


organism_name: Neisseria gonorrhoeae


organism_name: Clostridiales bacterium


organism_name: Clostridia bacterium


organism_name: Peptoniphilus lacydonensis


organism_name: Microbacterium sp.


organism_name: Tsuneonella sp.


organism_name: Streptococcus alactolyticus


organism_name: Turicibacter sp.


organism_name: Sphingomonadales bacterium


organism_name: Chloroflexia bacterium


organism_name: Limosilactobacillus reuteri


organism_name: Lactobacillus johnsonii


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


asm_submitter: FDA/CFSAN

organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Bacillota bacterium


organism_name: Cutibacterium acnes


organism_name: Salmonella enterica subsp. enterica serovar Muenster


organism_name: Lachnospiraceae bacterium


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Escherichia coli


organism_name: Clostridiales bacterium


organism_name: Atopostipes sp.


organism_name: Candidatus Fimimorpha faecalis


organism_name: Klebsiella pneumoniae


organism_name: Streptococcus alactolyticus


asm_submitter: Hannover Medical School

infraspecific_name: strain=NZPT 0170

organism_name: Burkholderia multivorans


asm_submitter: Sun Yat-Sen University

organism_name: Pseudomonas anguilliseptica


asm_submitter: Chinese center for disease control and prevention

organism_name: Salmonella enterica


organism_name: Klebsiella variicola


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Neisseria gonorrhoeae


organism_name: Salmonella enterica subsp. enterica


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Enterococcus faecalis


organism_name: Enterococcus hirae


organism_name: Enterococcus faecium


organism_name: Acinetobacter baumannii


organism_name: Escherichia coli


asm_submitter: National Center for Biotechnology Information


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Klebsiella aerogenes


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Klebsiella pneumoniae


organism_name: Listeria monocytogenes


organism_name: Neisseria gonorrhoeae


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Klebsiella variicola


organism_name: Enterococcus faecium


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Streptococcus pyogenes


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


organism_name: Salmonella enterica subsp. enterica serovar Alachua


organism_name: Salmonella enterica subsp. enterica serovar Agona


asm_submitter: Zhejiang University

assembly_level: Complete Genome

organism_name: Acinetobacter baumannii


organism_name: Klebsiella aerogenes


organism_name: Klebsiella pneumoniae


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Enterococcus faecium


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Streptococcus pyogenes


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Pseudomonas aeruginosa


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Escherichia coli


organism_name: Klebsiella aerogenes


organism_name: Neisseria gonorrhoeae


organism_name: Klebsiella pneumoniae


organism_name: Klebsiella oxytoca


isolate: SPN

organism_name: Streptococcus pneumoniae


infraspecific_name: strain=non-typable


infraspecific_name: strain=QC


organism_name: Listeria innocua


isolate: clinical

organism_name: Acinetobacter baumannii


organism_name: Yersinia enterocolitica


asm_submitter: Center for Food Safety and Applied Nutrition

organism_name: Salmonella enterica


organism_name: Enterobacter hormaechei


organism_name: Staphylococcus aureus


organism_name: Serratia marcescens


organism_name: Enterococcus faecium


organism_name: Streptococcus pyogenes


organism_name: Vibrio parahaemolyticus


organism_name: Enterobacter asburiae


organism_name: Escherichia coli


organism_name: Legionella pneumophila


organism_name: Klebsiella quasipneumoniae subsp. similipneumoniae


organism_name: Klebsiella pneumoniae


organism_name: Klebsiella variicola subsp. variicola


organism_name: Neisseria gonorrhoeae


organism_name: Klebsiella aerogenes


organism_name: Streptococcus pneumoniae


asm_submitter: CDC


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Meleagridis


organism_name: Enterococcus hirae


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Acinetobacter baumannii


organism_name: Staphylococcus aureus


organism_name: Enterococcus faecium


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Escherichia coli


organism_name: Salmonella enterica


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Streptococcus pyogenes


organism_name: Salmonella enterica subsp. enterica serovar Berta


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Altona


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Klebsiella pneumoniae


organism_name: Pseudomonas aeruginosa


asm_submitter: Brigham & Women's Hospital

organism_name: Clostridioides difficile


asm_submitter: Washington State Department of Agriculture GenomeTrakr submission group


isolate: Campylobacter jejuni

organism_name: Campylobacter jejuni


organism_name: Acinetobacter baumannii


isolate: Campylobacter coli

organism_name: Campylobacter coli


organism_name: Enterococcus faecium


isolate: Campylobacter lari

organism_name: Campylobacter lari


organism_name: Salmonella enterica


organism_name: Escherichia coli


asm_submitter: University of Tennessee

infraspecific_name: strain=UTK W1-0003

organism_name: Salmonella enterica subsp. enterica serovar Bareilly


infraspecific_name: strain=UTK W1-0001

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


asm_submitter: Korea Institute of Industrial Technology

organism_name: Nonomuraea sp. JJY05


asm_submitter: University of Sciences and Technology Oran USTOMB

organism_name: Pseudomonas retamae

refseq_category: reference genome

relation_to_type_material: assembly from type material


asm_submitter: Loyola University Chicago

organism_name: Actinotignum cystesis


asm_submitter: University of Sheffield


asm_submitter: UC Davis

organism_name: Thalassobacillus sp. B23F22_16


organism_name: Halomonas sp. B23F22_3


organism_name: Halomonas sp. B23F22_10


organism_name: Halomonas sp. B23F22_20


organism_name: Halobacillus sp. B23F22_1


asm_submitter: Universidad Autonoma de Sinaloa

organism_name: Vibrio parahaemolyticus


organism_name: Halobacillus sp. B23F22_5


asm_submitter: Nanjing Agricultural University

organism_name: Clostridium perfringens


asm_submitter: Academician I.N.Blokhina Nizhny Novgorod Scientific Research Institute of Epidemiology and Microbiol

excluded_from_refseq: fragmented assembly

organism_name: Staphylococcus aureus


asm_submitter: Fondazione IRCCS Policlinico San Matteo

organism_name: Streptococcus pyogenes


organism_name: Staphylococcus epidermidis


organism_name: Klebsiella pneumoniae


asm_submitter: Engelhardt Institute of Molecular Biology

organism_name: Microbacterium sp. S16(2024)


asm_submitter: Catalan Institute for Water Research (ICRA)

infraspecific_name: strain=CIBGEN 002

organism_name: Vibrio diabolicus


organism_name: Sphingomonas sp. S6


organism_name: Corynebacterium hesseae


asm_submitter: Vanderbilt University Medical Center

organism_name: Actinotignum schaalii


asm_submitter: General University Hospital of Larissa

organism_name: Pseudomonas aeruginosa


asm_submitter: Hanyang University

infraspecific_name: strain=MH

organism_name: Megasphaera hexanoica


asm_submitter: G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, PSCBR RAS

organism_name: Streptomyces rochei


asm_submitter: Xinjiang Institute of Ecology and Geography Chinese Academy of Sciences

isolate: EGI Meta_L10022

organism_name: Halotectona sediminis (SeqCode)


organism_name: Wenzhouxiangellaceae bacterium


asm_submitter: National Institute for Biotechnology and Genetic Engineering (NIBGE)


asm_submitter: FDA/CFSAN

organism_name: Listeria monocytogenes


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Chester


asm_submitter: Health Protection Agency

organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


asm_submitter: FDA


organism_name: Salmonella bongori


organism_name: Shigella sonnei


organism_name: Shigella boydii


organism_name: Shigella flexneri


asm_submitter: CDC

organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


asm_submitter: Brigham & Women's Hospital

organism_name: Clostridioides difficile


asm_submitter: Washington State Department of Agriculture GenomeTrakr submission group


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Klebsiella aerogenes


organism_name: Acinetobacter baumannii


organism_name: Escherichia coli


asm_submitter: National Center for Biotechnology Information

infraspecific_name: strain=ExPEC


isolate: clinical isolate

organism_name: Enterobacter hormaechei


organism_name: Proteus mirabilis


isolate: blood culture


organism_name: Vibrio parahaemolyticus


organism_name: Streptococcus pyogenes


organism_name: Enterococcus faecium


isolate: stools


infraspecific_name: strain=FSEF


infraspecific_name: strain=IMM


infraspecific_name: strain=LMR


isolate: bones


isolate: superficial pus


isolate: vaginal swab


infraspecific_name: strain=CAE

isolate: horse wound


infraspecific_name: strain=EEQ

isolate: quality evaluation


organism_name: Klebsiella pneumoniae


infraspecific_name: strain=ALE


infraspecific_name: strain=LIM

isolate: urines


infraspecific_name: strain=NIM


infraspecific_name: strain=AVC


isolate: protected distal aspiration


infraspecific_name: strain=BES


organism_name: Pseudomonas aeruginosa


isolate: tracheal aspiration


infraspecific_name: strain=TOU


infraspecific_name: strain=STR


infraspecific_name: strain=SLS


organism_name: Salmonella enterica subsp. enterica


infraspecific_name: strain=MAR


asm_submitter: Murdoch University

assembly_level: Chromosome

infraspecific_name: strain=AUS-2; MLST 775


organism_name: Shigella sonnei


organism_name: Shigella flexneri


infraspecific_name: strain=AUS-1; MLST 649


infraspecific_name: strain=ExPEC


asm_submitter: University of Tennessee, Knoxville

infraspecific_name: strain=GP

organism_name: Dehalogenimonas etheniformans


asm_submitter: Chang Gung University

organism_name: Streptococcus anginosus


asm_submitter: Fujian Agriculture and Forestry University

organism_name: Lysobacter enzymogenes


asm_submitter: Yangzhou University

organism_name: Klebsiella ornithinolytica


asm_submitter: south china agricultural university

infraspecific_name: strain=DC

organism_name: Citrobacter amalonaticus


organism_name: Acinetobacter baumannii


organism_name: Campylobacter jejuni


organism_name: Staphylococcus aureus


organism_name: Escherichia coli


asm_submitter: BiOSSE

organism_name: Alphaproteobacteria bacterium


organism_name: Limnobacter sp.


organism_name: Enterococcus faecium


organism_name: Sphingobacteriales bacterium


organism_name: Salmonella enterica


organism_name: Streptococcus pneumoniae


organism_name: Streptococcus pyogenes


organism_name: Klebsiella pneumoniae


organism_name: OM182 bacterium


organism_name: Loktanella sp.


organism_name: Rhizobiaceae bacterium


organism_name: Oceanicaulis sp.


organism_name: Cohaesibacter sp.


organism_name: Hyphomonadaceae bacterium


organism_name: Enterobacter hormaechei


organism_name: Cellvibrionales bacterium


organism_name: Escherichia coli


asm_submitter: Shandong university

organism_name: Pseudomonas syringae pv. syringae


isolate: klepne


isolate: citfre

organism_name: Citrobacter freundii


isolate: esccol


isolate: citfar

organism_name: Citrobacter farmeri


organism_name: Shigella sonnei


organism_name: Shigella flexneri


asm_submitter: Lanzhou University

excluded_from_refseq: genome length too large

organism_name: Pediococcus cellicola


organism_name: Enterococcus faecium


organism_name: Streptococcus pyogenes


isolate: Campylobacter jejuni

organism_name: Campylobacter jejuni


organism_name: Streptococcus pneumoniae


organism_name: Salmonella enterica


isolate: GAS


organism_name: Acinetobacter baumannii


isolate: Invasive

organism_name: Streptococcus agalactiae


asm_submitter: chungnam national university

organism_name: Agromyces sp. MMS24-JH15


isolate: GBS


organism_name: Klebsiella pneumoniae


organism_name: Enterococcus faecalis


organism_name: Salmonella enterica subsp. enterica serovar Derby


isolate: Campylobacter coli

organism_name: Campylobacter coli


organism_name: Escherichia coli


asm_name: Geneious Prime

asm_submitter: Sultan Qaboos University

organism_name: Tenacibaculum mesophilum


isolate: clinical isolate


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Pseudomonas aeruginosa


asm_submitter: Health Protection Agency


asm_submitter: Zhejiang university

organism_name: Paenarthrobacter nicotinovorans


asm_submitter: Empresa Brasileira de Pesquisa Agropecuaria

organism_name: Bacillus velezensis


organism_name: Klebsiella quasipneumoniae


organism_name: Enterococcus faecium


organism_name: Shigella flexneri


asm_submitter: Hanyang University

infraspecific_name: strain=MH

organism_name: Megasphaera hexanoica


organism_name: Streptococcus pneumoniae


asm_submitter: Shandong Agricultural University


asm_submitter: National Center for Biotechnology Information

organism_name: Streptococcus pyogenes


organism_name: Salmonella enterica


asm_submitter: Nanyang Technological University

organism_name: Priestia aryabhattai


organism_name: Streptomyces sp. SGAir0957


organism_name: Campylobacter jejuni


organism_name: Vibrio cholerae


organism_name: Escherichia coli


organism_name: Geobacillus thermoleovorans


organism_name: Staphylococcus aureus


organism_name: Pantoea sp. SGAir0418


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Berta


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Curtobacterium sp. SGAir0571


organism_name: Pantoea ananatis


organism_name: Cytobacillus firmus


organism_name: Streptococcus pneumoniae


organism_name: Pantoea sp. SGAir0215


organism_name: Priestia aryabhattai


organism_name: Streptococcus pyogenes


organism_name: Pantoea sp. SGAir0184


organism_name: Pantoea sp. SGAir0183


organism_name: Pantoea sp. SGAir0180


organism_name: Pantoea sp. SGAir0175


organism_name: Yersinia enterocolitica


organism_name: Staphylococcus aureus


organism_name: Enterococcus faecium


organism_name: Micrococcus luteus


organism_name: Pantoea sp. SGAir0430


isolate: Human

organism_name: Listeria monocytogenes


asm_submitter: Chang Gung Memorial Hospital

organism_name: Staphylococcus lugdunensis


organism_name: Legionella pneumophila


organism_name: Klebsiella pneumoniae


organism_name: Escherichia coli


organism_name: Enterobacter hormaechei


asm_submitter: Toulouse Biotechnology Institute

organism_name: Lactococcus lactis subsp. lactis


excluded_from_refseq: contaminated; from large multi-isolate project


organism_name: Staphylococcus pseudintermedius


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Pseudomonas aeruginosa


organism_name: Staphylococcus aureus


organism_name: Streptococcus pyogenes


organism_name: Enterococcus faecium


organism_name: Yersinia enterocolitica


organism_name: Serratia marcescens


organism_name: Klebsiella ornithinolytica


organism_name: Klebsiella quasipneumoniae


organism_name: Enterobacter roggenkampii


organism_name: Enterobacter asburiae


asm_submitter: Hunan Normal University

organism_name: Aeromonas hydrophila


organism_name: Bacillus paranthracis


organism_name: Paracoccaceae bacterium


organism_name: Acinetobacter baumannii


organism_name: Proteus mirabilis


organism_name: Marinoscillum sp.


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Poona


organism_name: Staphylococcus aureus


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Enterococcus faecium


organism_name: Streptococcus pyogenes


organism_name: Roseovarius sp.


organism_name: Yersinia enterocolitica


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Klebsiella pneumoniae


organism_name: Enterobacter roggenkampii


organism_name: Enterobacter hormaechei


asm_submitter: BiOSSE

organism_name: Balneola sp.


asm_submitter: Nanjing Institute of Geography and Limnology, Chinese Academy of Sciences

organism_name: Pelomonas parva


organism_name: Roseateles rivi


organism_name: Pelomonas dachongensis


organism_name: Pelomonas margarita


organism_name: Pelomonas lactea


organism_name: Pelomonas baiyunensis


asm_submitter: Shanghai Jiao Tong University School of Medicine

organism_name: Klebsiella variicola


organism_name: Pelomonas nitida


organism_name: Pelomonas candidula


organism_name: Staphylococcus aureus


organism_name: Pseudomonas aeruginosa


organism_name: Klebsiella quasipneumoniae


excluded_from_refseq: unverified source organism


asm_submitter: Chinese Center for Disease Control and Prevention

organism_name: Microbacterium sp. P03


organism_name: Microbacterium hanjuni


organism_name: Microbacterium shimangi


asm_submitter: Bhagwan Mahavir University

excluded_from_refseq: many frameshifted proteins

organism_name: Escherichia coli


asm_submitter: The Chinese University of Hong Kong

organism_name: Sulfitobacter sp. TB366


organism_name: Sulfitobacter sp. S45


organism_name: Sulfitobacter sp. M23905


organism_name: Sulfitobacter sp. M22298


organism_name: Sulfitobacter sp. MOLA879


organism_name: Sulfitobacter sp. M23508


organism_name: Sulfitobacter sp. M21595


organism_name: Sulfitobacter sp. CS16


organism_name: Sulfitobacter sp. 1A15333


organism_name: Sulfitobacter sp. 1A16808


organism_name: Sulfitobacter sp. 1A16787


organism_name: Staphylococcus aureus


organism_name: Sulfitobacter sp. 1A15299


organism_name: Sulfitobacter sp. 1A15106


organism_name: Sulfitobacter sp. 1A15142


organism_name: Sulfitobacter sp. 1A15258


organism_name: Sulfitobacter sp. 1A13730


organism_name: Sulfitobacter sp. 1A13679


organism_name: Flavobacteriaceae bacterium


organism_name: Sulfitobacter sp. 1A13496


organism_name: Sulfitobacter sp. 1A13191


organism_name: Sulfitobacter sp. 1A13353


organism_name: Sulfitobacter sp. 1A13368


organism_name: Sulfitobacter sp. 1A13421


organism_name: Sulfitobacter sp. 1A12779


organism_name: Sulfitobacter sp. 1A12157


asm_submitter: University of Queensland

organism_name: Turicimonas muris


organism_name: Akkermansia muciniphila


organism_name: Desulfovibrio sp.


organism_name: Mailhella sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Oscillospiraceae bacterium


organism_name: Clostridia bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Schaedlerella sp.


organism_name: Acetatifactor sp.


organism_name: Alistipes sp.


organism_name: Parabacteroides distasonis


organism_name: Muribaculaceae bacterium


organism_name: Muribaculum sp.


organism_name: Paramuribaculum sp.


organism_name: Candidatus Amulumruptor sp.


organism_name: Bacteroides acidifaciens


asm_submitter: CSIR-Institute of Microbial Technology

infraspecific_name: strain=UD

organism_name: Fictibacillus sp. UD


organism_name: Sulfitobacter sp. 1A10444


organism_name: Sulfitobacter sp. 1A10445


organism_name: Sulfitobacter sp. 1A12057


organism_name: Sulfitobacter sp. 1A12126


organism_name: Sulfitobacter sp. 1A12056


organism_name: Sulfitobacter sp. 1A10359


organism_name: Sulfitobacter sp. 1A09368


organism_name: Sulfitobacter sp. 1A09293


organism_name: Sulfitobacter sp. 1A09213


organism_name: Sulfitobacter sp. 1A09261


organism_name: Staphylococcus aureus


organism_name: Sulfitobacter sp. 1A09134


organism_name: Sulfitobacter sp. 1A09149


organism_name: Sulfitobacter sp. 1A09044


organism_name: Sulfitobacter sp. 1A05707


organism_name: Sulfitobacter sp. 915


organism_name: Sulfitobacter sp. 1A09132


organism_name: Sulfitobacter sp. 916


organism_name: Klebsiella pneumoniae


asm_submitter: National Institute of Biotechnology

excluded_from_refseq: annotation fails completeness check

organism_name: Bacillus subtilis


asm_submitter: Honam National Institute of Biological Resources

organism_name: Mariniflexile sp. HNIBRBA6329


asm_submitter: National Center for Biotechnology Information

organism_name: Campylobacter jejuni


organism_name: Halomonas sp. HNIBRBA4712


organism_name: Leuconostoc lactis


asm_submitter: Nizhny Novgorod Research Veterinary Institute Branch of FRCVM

organism_name: Scandinavium sp. M-37


organism_name: Campylobacter coli


organism_name: Enterococcus lactis


organism_name: Streptococcus pyogenes


organism_name: Weissella confusa


asm_submitter: AB PRISMA


organism_name: Staphylococcus aureus


organism_name: Alcanivorax sp.


asm_submitter: Sanya people's hospital

organism_name: Burkholderia pseudomallei


organism_name: Enterococcus faecium


organism_name: Bacillus paranthracis


organism_name: Paracoccaceae bacterium


asm_submitter: Yangzhou University

infraspecific_name: strain=CICC 10432

organism_name: Enterobacter hormaechei


infraspecific_name: strain=CICC 23487


asm_submitter: CSIR-National Institute of Oceanography

organism_name: Stutzerimonas stutzeri


infraspecific_name: strain=CICC 24133


asm_submitter: Faculty of Science and Technology of Tangier

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Lactococcus lactis


asm_submitter: SciBear OU

organism_name: Methylorubrum rhodesianum


asm_submitter: CSIR-Institute of Himalayan Bioresource Technology

organism_name: Shewanella oncorhynchi


asm_submitter: National Center of Infectious and Parasitic Diseases

organism_name: Klebsiella pneumoniae


asm_submitter: BiOSSE

excluded_from_refseq: derived from metagenome

organism_name: Maribacter sp.


organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


asm_submitter: Universidade Federal de Sao Carlos

infraspecific_name: strain=AHR-KA 1

organism_name: Klebsiella aerogenes


excluded_from_refseq: from large multi-isolate project

organism_name: Pseudomonas aeruginosa


organism_name: Staphylococcus aureus


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; many frameshifted proteins

organism_name: Antarctobacter sp.


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Luteolibacter sp.


organism_name: Shigella flexneri


organism_name: Enterococcus faecium


organism_name: Escherichia coli


organism_name: Erythrobacter sp.


organism_name: Marivita sp.


asm_submitter: DinsdaleLab Sequences

organism_name: Shewanella sp. ENK2


organism_name: Enterobacter kobei


organism_name: Klebsiella pneumoniae


organism_name: Vibrio atlanticus


organism_name: Citrobacter freundii


organism_name: Shewanella woodyi


asm_submitter: Fujian medical university union hospital


organism_name: Salmonella enterica subsp. enterica serovar Adelaide


organism_name: Pseudomonas aeruginosa


organism_name: Staphylococcus aureus


organism_name: Streptococcus pneumoniae


isolate: human


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Acinetobacter baumannii


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Altona


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Escherichia coli


asm_submitter: Erciyes University


isolate: Salmonella

organism_name: Salmonella enterica subsp. enterica serovar Meleagridis


organism_name: Enterobacter sichuanensis


excluded_from_refseq: unverified source organism; from large multi-isolate project

organism_name: Yersinia enterocolitica


organism_name: Klebsiella quasipneumoniae


organism_name: Klebsiella pneumoniae


organism_name: Serratia marcescens


organism_name: Klebsiella variicola


asm_submitter: Henan Provincial People's Hospital

organism_name: Ralstonia mannitolilytica


asm_submitter: hunan normal university

infraspecific_name: strain=CCTCC M206084 630

organism_name: Saccharopolyspora spinosa


asm_submitter: National Center for Biotechnology Information


infraspecific_name: strain=HPK 7185_18


organism_name: Enterococcus faecium


organism_name: Salmonella enterica subsp. enterica serovar Havana


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar Reading


organism_name: Salmonella enterica subsp. enterica serovar Give


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Hadar


asm_submitter: Univeristy of Bristol

infraspecific_name: strain=DSM 45791

organism_name: Kutzneria buriramensis


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Ohio


organism_name: Salmonella enterica subsp. enterica serovar Chailey


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Lubbock


asm_submitter: USDA FSIS

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


asm_name: delhigA

asm_submitter: South China Sea Institute of Oceanology

organism_name: Pseudomonas aeruginosa


organism_name: Hyphobacterium sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; many frameshifted proteins

organism_name: Sulfitobacter sp.


organism_name: Fluviicola sp.


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Hoeflea sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Cellvibrionales bacterium


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome

organism_name: Marivita sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome


asm_submitter: Promix Biyoteknoloji Tarim Urunleri Muhendislik San. ve Tic. Ltd. Sti.

organism_name: Pseudomonas fluorescens


asm_submitter: Institute of Petroleum and Natural Resources (IPR)

organism_name: Vreelandella stevensii


organism_name: Escherichia coli


asm_submitter: University of Minnesota

infraspecific_name: strain=ATCC 23833

organism_name: Azorhizophilus paspali


organism_name: Klebsiella pneumoniae


asm_submitter: Hangzhou Wahaha Group Co., LTD.

organism_name: Lacticaseibacillus rhamnosus


asm_submitter: College of Coastal Agricultural Sciences

organism_name: Sphingobium naphthae