organism_name: Halobacteriovorax sp. RT-2-5


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: National Center for Biotechnology Information

assembly_level: Contig

assembly_type: haploid

excluded_from_refseq: from large multi-isolate project

genome_rep: Full

group: bacteria

organism_name: Streptococcus pneumoniae

release_type: Major

version_status: latest


asm_submitter: Shandong University at Weihai

assembly_level: Scaffold

organism_name: Halobacteriovorax sp. RT-2-3

paired_asm_comp: identical


organism_name: Halobacteriovorax sp. RT-1-5


organism_name: Halobacteriovorax sp. RT-1-6


organism_name: Halobacteriovorax sp. RT-1-4


organism_name: Halobacteriovorax sp. RT-2-2


organism_name: Halobacteriovorax sp. RT-1-3


organism_name: Halobacteriovorax sp. RT-2-1


organism_name: Halobacteriovorax sp. RT-2-4


organism_name: Halobacteriovorax sp. RT-1-1


organism_name: Halobacteriovorax sp. RT-1-2


asm_submitter: South China Agriculture University

organism_name: Shewanella chilikensis


organism_name: Shewanella indica


organism_name: Shewanella algae


organism_name: Escherichia coli


organism_name: Vibrio furnissii


organism_name: Vibrio fluvialis


asm_submitter: GDPU

organism_name: Streptococcus pneumoniae


asm_submitter: Institute of Cellular and Intracellular Symbiosis Russian Academy of Sciences

organism_name: Corynebacterium amycolatum


asm_submitter: Sun Yat-sen University

infraspecific_name: strain=SYSU LYC5161

organism_name: Roseovarius halophilus (ex Wu et al. 2025)

relation_to_type_material: assembly from type material


asm_submitter: USDA FSIS

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


asm_submitter: FDA


infraspecific_name: strain=GPSC904; 9


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


isolate: Human feces

organism_name: Clostridioides difficile


organism_name: Klebsiella pneumoniae


organism_name: Streptococcus pyogenes


asm_submitter: Centers for Disease Control and Prevention


asm_submitter: Centers for Disease Control and Prevention.  Division of Healthcare Quality Promotion

assembly_level: Complete Genome


organism_name: Proteus mirabilis


asm_submitter: Public Health England


infraspecific_name: strain=No GPSC


asm_submitter: Drexel University College of Medicine

organism_name: Haemophilus influenzae


organism_name: Haemophilus influenzae 2019


assembly_level: Chromosome


asm_submitter: Korea National Institute of Health

organism_name: Mycobacterium tuberculosis


asm_submitter: Shenzhen University

excluded_from_refseq: annotation fails completeness check

organism_name: Salmonella enterica subsp. indica serovar 11:b:e,n,x


asm_submitter: Institute of Chemistry and Biology of the Sea, Carl von Ossietzky University, Oldenburg

organism_name: Vibrio sp. TBRI6


organism_name: Nereida ignava

refseq_category: reference genome


asm_submitter: Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna "Bruno Ubertini"

organism_name: Escherichia coli


asm_submitter: Chulalongkorn University


asm_submitter: National Center for Biotechnology Information

organism_name: Streptococcus pneumoniae


asm_submitter: The Affiliated Wenling Hospital


organism_name: Klebsiella michiganensis


organism_name: Enterobacter roggenkampii


organism_name: Klebsiella variicola


asm_submitter: CIQUIBIC-CONICET

excluded_from_refseq: out of scope for the RefSeq project

organism_name: Pseudomonas aeruginosa PA14


asm_name: PA14 wild type


isolate: clinical

organism_name: Burkholderia cenocepacia


asm_submitter: University of Gdansk

excluded_from_refseq: contaminated

organism_name: Parageobacillus genomosp. 1


asm_submitter: Imperial College London

infraspecific_name: strain=ATCC 13047

organism_name: Enterobacter cloacae subsp. cloacae


organism_name: Acinetobacter baumannii


asm_submitter: Siena College

organism_name: Bacillus subtilis


asm_submitter: South China Agricultural University

organism_name: Ralstonia pseudosolanacearum


isolate: clinical isolate

organism_name: Pseudomonas aeruginosa


asm_submitter: Georg-August University Goettingen, Institute of Microbiology and Genetics


asm_submitter: Anhui University of Chinese Medicine

organism_name: Bacillus velezensis


asm_submitter: Kitasato University

organism_name: Longispora agrisoli


asm_submitter: Massachusetts Institute of Technology

organism_name: Thalassospira sp. MIT1370


organism_name: Marinobacter sp. MIT1358


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Citrobacter farmeri


organism_name: Streptococcus pneumoniae


organism_name: Klebsiella pneumoniae


organism_name: Marinobacter sp. MIT930201


organism_name: Marinobacter sp. MIT932201


organism_name: Thalassobius sp. MITS945101


organism_name: Maricaulis sp. MIT060901


organism_name: Shimia sp. MIT1388


organism_name: Marinobacter sp. MIT1392


organism_name: Acinetobacter baumannii


organism_name: Marinobacter sp. MIT0238


organism_name: Thalassospira sp. MIT121401


excluded_from_refseq: genus undefined

organism_name: Rhodobacteraceae bacterium MIT070201


infraspecific_name: strain=GPSC782; 120


organism_name: Shimia sp. MIT910701


organism_name: Pseudomonas aeruginosa


organism_name: Winogradskyella sp. MIT101101


asm_name: HGAP 4

asm_submitter: University of Hawaii

organism_name: Xanthomonas phaseoli pv. dieffenbachiae


asm_submitter: FCAV/UNESP. Universidade Estadual Paulista

organism_name: Burkholderia lata


organism_name: Streptococcus pneumoniae


organism_name: Burkholderia cenocepacia


asm_submitter: Faculty of Veterinary Science, Chulalongkorn University

organism_name: Staphylococcus pseudintermedius


organism_name: Klebsiella pneumoniae


asm_submitter: Kasetsart University

excluded_from_refseq: missing rRNA genes; missing tRNA genes

organism_name: Vibrio vulnificus


asm_submitter: Institute of Plant Protection, Chinese Academy of Agricultural Sciences

organism_name: Bacillus thuringiensis


asm_submitter: college of bioengineering

infraspecific_name: strain=ATCC 19425

organism_name: Actinomadura madurae


asm_submitter: Tianjin University of Science and Technology

organism_name: Bacillus licheniformis


organism_name: Serratia ureilytica


organism_name: Acinetobacter baumannii


asm_submitter: National Center for Biotechnology Information


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


annotation_name: Annotation submitted by Department of Life Science & Medical Bioscience, School of Advanced Science and Engineering, Waseda University

excluded_from_refseq: contaminated; derived from metagenome

organism_name: Nitrospira sp.


annotation_provider: Department of Life Science & Medical Bioscience, School of Advanced Science and Engineering, Waseda University

excluded_from_refseq: derived from metagenome

organism_name: Nitrobacter sp.


asm_submitter: Department of Life Science & Medical Bioscience, School of Advanced Science and Engineering, Waseda University

organism_name: Nitrosospira sp.


annotation_name: Annotation submitted by Seoul National University School of Veterinary Medicine

organism_name: Clostridium perfringens A


annotation_provider: Seoul National University School of Veterinary Medicine


asm_submitter: Seoul National University School of Veterinary Medicine


infraspecific_name: strain=SNUVG


annotation_name: Annotation submitted by Bacteriology1, National Institute of Infectious Diseases - Japan

organism_name: Escherichia coli


annotation_provider: Bacteriology1, National Institute of Infectious Diseases - Japan


asm_submitter: Bacteriology1, National Institute of Infectious Diseases - Japan


asm_submitter: The University of Tokyo


excluded_from_refseq: genome length too small


excluded_from_refseq: annotation fails completeness check; many frameshifted proteins


annotation_name: Annotation submitted by Toyohashi University of Technology

annotation_provider: Toyohashi University of Technology

asm_submitter: Toyohashi University of Technology

infraspecific_name: strain=AM

organism_name: Candidatus Carsonella ruddii (Anomoneura mori)


organism_name: Enterobacterales bacterium endosymbiont of Anomoneura mori


annotation_name: Annotation submitted by Laboratory of Biosynthetic Chemistry, Faculty of Engineering, Hokkaido University

organism_name: Alteromonas sp. D210916BOD_24


organism_name: Streptococcus pneumoniae


annotation_name: Annotation submitted by Gifu Prefectural Research Institute for Health and Environmental Sciences

organism_name: Enterobacter asburiae


annotation_name: Annotation submitted by University of Yamanashi

annotation_provider: University of Yamanashi

asm_submitter: University of Yamanashi

organism_name: Krasilnikovia sp. MM14-A1004


organism_name: Krasilnikovia sp. MM14-A1259


organism_name: Krasilnikovia sp. M28-CT-15


annotation_name: Annotation submitted by Materials Science and Bioengineering, Nagaoka University of Technology

organism_name: Pseudomonas sp. NGC7


annotation_name: Annotation submitted by Microbial Ecology and Technology Research Group  Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST)

organism_name: Minisyncoccus archaeiphilus


annotation_name: Annotation submitted by Laboratory of Food Microbiology and Food Safety, School of Veterinary Medicine, Rakuno Gakuen University

excluded_from_refseq: contaminated; genome length too large

organism_name: Mammaliicoccus lentus


annotation_name: Annotation submitted by Mie university

annotation_provider: Mie university

asm_submitter: Mie university

organism_name: Arcobacter sp. 15-2


annotation_name: Annotation submitted by Graduate School of Pharmaceutical Sciences, Aichi Gakuin University

infraspecific_name: strain=JCM 32365

organism_name: Lysobacter xanthus


annotation_name: Annotation submitted by Saga University

annotation_provider: Saga University

asm_submitter: Saga University

excluded_from_refseq: contaminated; fragmented assembly

organism_name: Agarivorans albus


annotation_name: Annotation submitted by Department of Clinical Laboratory Science Faculty of Health Care, Tenri University

organism_name: Rodentibacter abscessus


annotation_provider: Department of Clinical Laboratory Science Faculty of Health Care, Tenri University


asm_submitter: Department of Clinical Laboratory Science Faculty of Health Care, Tenri University


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


organism_name: Citrobacter koseri


organism_name: Providencia stuartii


asm_submitter: The University of Auckland

excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Rikenellaceae bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined


organism_name: Pseudomonas aeruginosa


organism_name: Streptococcus pneumoniae


asm_submitter: beijjng center for disease prevention and control

organism_name: Campylobacter jejuni


asm_submitter: Imperial College London

organism_name: Escherichia coli


organism_name: Campylobacter coli


excluded_from_refseq: annotation fails completeness check; from large multi-isolate project; many frameshifted proteins


asm_submitter: Zhujiang Hospital


asm_submitter: Yonsei University


asm_submitter: University of the Witwatersrand


excluded_from_refseq: contaminated; annotation fails completeness check; many frameshifted proteins


asm_name: DL

asm_submitter: Dalian University of Technology

infraspecific_name: strain=DL

organism_name: Pseudomonas sp. DL


asm_submitter: Peking Union Medical College Hospital

organism_name: Corynebacterium striatum


asm_submitter: Puyang Oil Field General Hospital

organism_name: Klebsiella pneumoniae


asm_submitter: Shanxi Eye Hospital

organism_name: Acinetobacter sp. SEK570


asm_submitter: USDA-ARS

organism_name: Bacillus mobilis


asm_submitter: Chulalongkorn University

organism_name: Micromonospora mangrovicola


organism_name: Paenibacillus sp. MB22_1


organism_name: Streptomyces sp. MB22_4


organism_name: Streptomyces sp. MS19


organism_name: Nocardia sichangensis


organism_name: Saccharopolyspora antibiotica


organism_name: Streptomyces sp. MS06


organism_name: Streptomyces callyspongiae


organism_name: Aeromonas diversa


organism_name: Pseudonocardia oceanicola


organism_name: Aeromonas sanarellii


organism_name: Nocardia spongicola


asm_submitter: Chinese Academy of Agricultural Sciences

organism_name: Leadbetterella byssophila


asm_submitter: Huazhong Agricultural University

organism_name: Ralstonia nicotianae


organism_name: Corynebacterium striatum


asm_submitter: Fatima Jinnah Women University

organism_name: Lactiplantibacillus plantarum


asm_submitter: eLMSG

organism_name: Bacillus altitudinis


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: FDA Center for Food Safety and Applied Nutrition


asm_submitter: CDC

organism_name: Salmonella enterica


asm_submitter: Public Health England

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


excluded_from_refseq: unverified source organism; from large multi-isolate project


excluded_from_refseq: from large multi-isolate project

organism_name: Salmonella enterica subsp. enterica serovar Bredeney


organism_name: Salmonella enterica subsp. enterica serovar Brandenburg


asm_submitter: The Ohio State University College of Dentistry

organism_name: Rothia mucilaginosa


asm_submitter: Inha university

organism_name: Streptomyces sp. Inha503


organism_name: Campylobacter lari


organism_name: Rothia dentocariosa


asm_submitter: Nanjing Agricultural University

organism_name: Streptomyces sp. CY-1


asm_submitter: Inha University

organism_name: Pontimicrobium sp. IMCC45349


asm_submitter: Bangladesh Livestock Research Institute

organism_name: Escherichia coli O157:H7


asm_submitter: Guizhou Medical University

organism_name: Bordetella pseudohinzii


asm_submitter: University of the Witwatersrand

organism_name: Escherichia coli


asm_submitter: Max Rubner-Institut

infraspecific_name: strain=LMG 24279

organism_name: Pediococcus siamensis


asm_submitter: Huaiyin Normal University

organism_name: Bacillus velezensis


asm_submitter: Bhabha Atomic Research Centre

infraspecific_name: strain=PMSZPI

organism_name: Chryseobacterium sp. PMSZPI


asm_submitter: Universite catholique de Louvain

organism_name: Vibrio cholerae


asm_submitter: Gachon University

infraspecific_name: strain=GCULR

organism_name: Pseudolactococcus raffinolactis


organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


asm_submitter: University of Bern


asm_submitter: Guangdong Academy of Sciences

infraspecific_name: strain=PHS-Q

organism_name: Ectothiorhodospira shaposhnikovii


asm_submitter: Vilnius University

organism_name: Pseudomonas bubulae


asm_submitter: Nigeria

organism_name: Acinetobacter baumannii


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica


asm_submitter: Inatural Biotech

organism_name: Lactiplantibacillus plantarum


asm_submitter: ZHEJIANG  A&F UNIVERSITY

organism_name: Sphingomonas carotinifaciens


asm_submitter: FDA


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Salmonella enterica


asm_submitter: CDC


organism_name: Salmonella enterica subsp. enterica serovar Kiambu


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Enterobacter hormaechei


asm_submitter: FDA/CFSAN


asm_submitter: National Center for Biotechnology Information

organism_name: Streptococcus pneumoniae


asm_submitter: Kyungpook National University

excluded_from_refseq: RefSeq annotation failed; annotation fails completeness check; many frameshifted proteins

organism_name: Bacillus pumilus


asm_submitter: Northwest University


asm_submitter: Department of Infection Metagenomics, RIMD, Osaka University

organism_name: Oscillospiraceae bacterium YB328


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Meleagridis


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Acinetobacter baumannii


organism_name: Klebsiella pneumoniae


organism_name: Yersinia enterocolitica


organism_name: Salmonella enterica


asm_submitter: Qingdao Agricultural University

organism_name: Pseudomonas sp. YJ42


asm_submitter: Federal University Lafia

infraspecific_name: strain=BAR-OCT

organism_name: Aeromonas dhakensis


asm_submitter: Institute for Agricultural, Fisheries and Food Research (ILVO)

infraspecific_name: strain=AGES 1891/18

organism_name: Curtobacterium flaccumfaciens pv. flaccumfaciens


infraspecific_name: strain=NIB Z 1289

organism_name: Curtobacterium flaccumfaciens


infraspecific_name: strain=NBC 5214


infraspecific_name: strain=GBBC 3473

organism_name: Curtobacterium poinsettiae


asm_submitter: Zhejiang Chinese Medical University


asm_submitter: Public Health England


organism_name: Campylobacter coli


asm_name: A297 complete genome

asm_submitter: University of Technology Sydney


asm_submitter: University of Illinois at Chicago

infraspecific_name: strain=UIC 10607

organism_name: Nostoc sp. UIC 10607


asm_submitter: Huzhou center for disease control and prevention

organism_name: Bacillus paranthracis


organism_name: Campylobacter jejuni


asm_submitter: Nantong Center for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: Jet Propulsion Laboratory, California Institute of Technology

infraspecific_name: strain=179-M 4D1 HS

organism_name: Niallia alba


infraspecific_name: strain=179-K 7C3 HS

organism_name: Peribacillus frigoritolerans


infraspecific_name: strain=179-M 5A1 HS

organism_name: Bacillus inaquosorum


infraspecific_name: strain=179-K 8D1 HS

organism_name: Siminovitchia jepli


infraspecific_name: strain=179-K 8C2 HS

organism_name: Sporosarcina pasadenensis


infraspecific_name: strain=179-K 7C1 HS

organism_name: Cytobacillus horneckiae


infraspecific_name: strain=179-K 3D1 HS

organism_name: Sporosarcina sp. 179-K 3D1 HS


infraspecific_name: strain=179-K 5D4 HS

organism_name: Brevibacillus invocatus


infraspecific_name: strain=179-K 1B1 HS

organism_name: Terribacillus jepli


infraspecific_name: strain=179-J 7C1 HS

organism_name: Ornithinibacillus jepli


infraspecific_name: strain=179-J 4D1 HS


infraspecific_name: strain=179-E 2B1 HS

organism_name: Bacillus mojavensis


infraspecific_name: strain=179-CFC.2 HS

organism_name: Priestia megaterium


infraspecific_name: strain=179-F 6C2 HS

organism_name: Lederbergia ruris


infraspecific_name: strain=179-D 9B2 HS


infraspecific_name: strain=179-C9.3 HS

organism_name: Brevibacillus jepli


infraspecific_name: strain=179-C8.5 HS


infraspecific_name: strain=179-C9.2 HS


infraspecific_name: strain=179-C8.1 HS


infraspecific_name: strain=179-C8.2 HS


infraspecific_name: strain=179-C8.4 HS


infraspecific_name: strain=179-C7.1 HS


infraspecific_name: strain=179-C3.3 HS

organism_name: Bacillus sp. 179-C3.3 HS


infraspecific_name: strain=179-C9.1 HS


infraspecific_name: strain=179-C1.2 HS


infraspecific_name: strain=179-C1.1 HS


infraspecific_name: strain=179-B3C HS

organism_name: Mesobacillus foraminis


infraspecific_name: strain=179-A 3A2 NHS

organism_name: Kocuria palustris


infraspecific_name: strain=179-A 4D5 NHS

organism_name: Cellulomonas jepli


infraspecific_name: strain=179-A 9B4 NHS

organism_name: Cellulomonas pasadenensis


infraspecific_name: strain=179-A 2A1 NHS

organism_name: Streptomyces nitrosporeus


asm_submitter: daegu university

organism_name: Lacticaseibacillus paracasei subsp. paracasei


asm_submitter: Washington University in Saint Louis

excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Bilophila wadsworthia


organism_name: Clostridia bacterium


organism_name: Bacteroides fragilis


organism_name: Mediterraneibacter faecis


organism_name: Mediterraneibacter torques


organism_name: Eggerthella lenta


organism_name: Pauljensenia sp.


organism_name: Enterococcus avium


organism_name: Veillonella sp.


organism_name: Thomasclavelia ramosa


organism_name: Enterococcus gallinarum


organism_name: Bifidobacterium adolescentis


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Blautia producta


organism_name: Faecalimonas umbilicata


organism_name: Enterocloster sp.


organism_name: Mediterraneibacter gnavus


organism_name: Anaerostipes hadrus


organism_name: Parasutterella excrementihominis


organism_name: Clostridium fessum


organism_name: Coprococcus phoceensis


organism_name: Sellimonas intestinalis


organism_name: Clostridium sp.


organism_name: Streptococcus salivarius


organism_name: Bifidobacterium bifidum


organism_name: Flavonifractor plautii


organism_name: Roseburia inulinivorans


organism_name: Agathobacter rectalis


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome

organism_name: Coprobacillus cateniformis


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Mediterraneibacter faecis


organism_name: Faecalibacterium prausnitzii


excluded_from_refseq: derived from metagenome; genome length too large

organism_name: Blautia wexlerae


excluded_from_refseq: derived from metagenome

organism_name: Enterocloster sp.


organism_name: Escherichia coli


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Thomasclavelia spiroformis


organism_name: Bacteroides caccae


organism_name: Anaerobutyricum hallii


excluded_from_refseq: contaminated; annotation fails MAG completeness check; derived from metagenome

organism_name: Coprococcus sp.


organism_name: Dialister invisus


organism_name: Faecalibacillus intestinalis


organism_name: Anaerovoracaceae bacterium


organism_name: [Eubacterium] siraeum


organism_name: Gemmiger formicilis


organism_name: Streptococcus salivarius


organism_name: Faecalibacterium sp.


organism_name: Acutalibacteraceae bacterium


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Ruminococcus sp.


organism_name: Intestinibacter bartlettii


organism_name: Evtepia gabavorous


organism_name: Streptococcus lutetiensis


excluded_from_refseq: contaminated; unverified source organism; derived from metagenome


organism_name: Akkermansia muciniphila


organism_name: Blautia wexlerae


organism_name: Blautia sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Eubacteriales bacterium


organism_name: Odoribacter splanchnicus


organism_name: Monoglobus pectinilyticus


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; many frameshifted proteins

organism_name: Blautia massiliensis (ex Durand et al. 2017)


organism_name: Oscillospiraceae bacterium


organism_name: Fusicatenibacter saccharivorans


organism_name: Alistipes onderdonkii


organism_name: Phocaeicola vulgatus


organism_name: Anaerotignum faecicola


excluded_from_refseq: contaminated; annotation fails MAG completeness check; derived from metagenome; many frameshifted proteins


organism_name: Parabacteroides distasonis


organism_name: Ruthenibacterium lactatiformans


organism_name: Subdoligranulum sp.


organism_name: Emergencia timonensis


organism_name: [Clostridium] leptum


organism_name: Butyricicoccus sp.


organism_name: Staphylococcus aureus


asm_submitter: National Center for Biotechnology Information

organism_name: Legionella pneumophila


organism_name: Adlercreutzia sp.


organism_name: Agathobacter rectalis


organism_name: Christensenellaceae bacterium


organism_name: Streptococcus salivarius


organism_name: Lachnospiraceae bacterium


organism_name: Anaerobutyricum soehngenii


organism_name: Christensenellales bacterium


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Lawsonibacter sp.


organism_name: Clostridia bacterium


organism_name: Bacteroides fragilis


asm_submitter: Center for Food Safety and Applied Nutrition

organism_name: Salmonella enterica


organism_name: Mediterraneibacter torques


organism_name: Mediterraneibacter faecis


organism_name: Enterococcus avium


organism_name: Ruminococcus sp.


organism_name: Bacteroides thetaiotaomicron


organism_name: Bifidobacterium longum


organism_name: Eggerthella lenta


organism_name: Acutalibacteraceae bacterium


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Enterobacter hormaechei


organism_name: Staphylococcus aureus


organism_name: Enterococcus gallinarum


organism_name: Acinetobacter baumannii


asm_submitter: CDC


organism_name: Thomasclavelia ramosa


organism_name: Streptococcus salivarius


organism_name: Roseburia faecis


organism_name: Clostridium sp.


organism_name: Klebsiella pneumoniae


organism_name: Blautia marasmi


organism_name: Legionella pneumophila


organism_name: Monoglobus pectinilyticus


organism_name: [Clostridium] scindens


organism_name: Ruthenibacterium lactatiformans


organism_name: Faecalimonas umbilicata


organism_name: Mediterraneibacter sp.


organism_name: Roseburia hominis


organism_name: Anaerostipes hadrus


organism_name: Clostridia bacterium


organism_name: Enterocloster sp.


organism_name: Veillonella sp.


organism_name: Coprobacillus cateniformis


organism_name: Roseburia intestinalis


organism_name: Streptococcus salivarius


organism_name: Sellimonas intestinalis


organism_name: Blautia wexlerae


organism_name: Lachnospira sp.


organism_name: Escherichia coli


organism_name: Veillonella nakazawae


organism_name: Eubacterium sp.


organism_name: Blautia marasmi


organism_name: Bacteroides ovatus


organism_name: Turicibacter sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Pilosibacter sp.


organism_name: Amedibacillus dolichus


organism_name: Bacteroides caccae


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Parasutterella excrementihominis


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; many frameshifted proteins

organism_name: Clostridium sp.


organism_name: Terrisporobacter sp.


organism_name: Coprococcus phoceensis


organism_name: Blautia sp.


organism_name: Lachnospira eligens


organism_name: Lachnospiraceae bacterium


organism_name: Haemophilus parainfluenzae


organism_name: Bifidobacterium adolescentis


organism_name: Streptococcus sp.


organism_name: Mediterraneibacter gnavus


organism_name: Bifidobacterium bifidum


organism_name: [Clostridium] symbiosum


organism_name: Anaerobutyricum hallii


organism_name: Anaerotignum sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Clostridium perfringens


organism_name: Faecalibacillus intestinalis


organism_name: Streptococcus salivarius


organism_name: Faecalibacterium prausnitzii


excluded_from_refseq: unverified source organism; derived from metagenome; genome length too small

organism_name: Alistipes finegoldii


organism_name: Ruminococcus callidus


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Anaerovoracaceae bacterium


organism_name: Dialister sp.


organism_name: Lachnospiraceae bacterium


organism_name: [Ruminococcus] lactaris


organism_name: Coprococcus sp.


organism_name: Gemmiger formicilis


organism_name: Agathobacter sp.


organism_name: Akkermansia muciniphila


organism_name: Ruminococcus sp.


organism_name: [Clostridium] leptum


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Streptococcus thermophilus


organism_name: Blautia producta


organism_name: Flavonifractor plautii


organism_name: Faecalibacillus intestinalis


organism_name: Intestinibacter bartlettii


organism_name: Blautia massiliensis (ex Durand et al. 2017)


organism_name: Lachnospira eligens


organism_name: Sutterella wadsworthensis


organism_name: Subdoligranulum sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Neglectibacter sp.


organism_name: Collinsella aerofaciens


organism_name: Alistipes sp.


organism_name: Anaerostipes sp.


organism_name: Agathobacter rectalis


organism_name: Klebsiella michiganensis


organism_name: Bifidobacterium adolescentis


organism_name: [Clostridium] innocuum


organism_name: Escherichia sp.


organism_name: Lachnospiraceae bacterium


organism_name: Thomasclavelia ramosa


organism_name: Streptococcus salivarius


organism_name: Coprobacillus cateniformis


organism_name: Romboutsia timonensis


organism_name: Staphylococcus aureus


organism_name: Anaerostipes hadrus


organism_name: Blautia hansenii


organism_name: Flavonifractor plautii


organism_name: Blautia wexlerae


organism_name: Parabacteroides distasonis


organism_name: Streptococcus xiaochunlingii


organism_name: Mediterraneibacter gnavus


organism_name: Enterococcus faecalis


organism_name: Coprococcus phoceensis


organism_name: Phocaeicola vulgatus


organism_name: Clostridium perfringens


organism_name: Roseburia faecis


organism_name: Streptococcus lutetiensis


organism_name: Anaerococcus vaginalis


organism_name: Turicibacter sp.


organism_name: Streptococcus thermophilus


organism_name: Lactobacillus acidophilus


organism_name: Bifidobacterium breve


organism_name: Bifidobacterium animalis


organism_name: Haemophilus parainfluenzae


organism_name: Enterococcus casseliflavus


organism_name: Lactobacillus delbrueckii


organism_name: Enterococcus faecium


organism_name: Lacticaseibacillus paracasei


organism_name: Mediterraneibacter gnavus


organism_name: Streptococcus sp.


organism_name: Escherichia coli


organism_name: Faecalibacterium sp.


organism_name: Beduini sp.


organism_name: Mediterraneibacter sp.


organism_name: Lachnospiraceae bacterium


organism_name: Clostridium sp.


organism_name: Intestinibacter bartlettii


organism_name: Collinsella intestinalis


organism_name: Blautia sp.


organism_name: Sellimonas sp.


organism_name: Enterocloster aldenensis


organism_name: Veillonella parvula


organism_name: Blautia producta


organism_name: Christensenellales bacterium


organism_name: Streptococcus salivarius


organism_name: Monoglobales bacterium


organism_name: Longicatena caecimuris


organism_name: [Eubacterium] siraeum


organism_name: Agathobaculum sp.


organism_name: Massiliimicrobium timonense


organism_name: Bacteroides faecis


organism_name: Paraprevotella clara


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Lacrimispora saccharolytica


organism_name: Bacteroides caccae


organism_name: Enterocloster bolteae


asm_submitter: University Hospital Regensburg

excluded_from_refseq: from large multi-isolate project

organism_name: Enterococcus faecium


organism_name: Salmonella enterica


organism_name: Neobacillus canaveralius


organism_name: Brevundimonas phoenicis


organism_name: Microbacterium pratiae


organism_name: Microbacterium jepli


organism_name: Noviherbaspirillum phoenicis


organism_name: Arthrobacter phoenicis


organism_name: Sphingomonas phoenicis


organism_name: Curtobacterium phoenicis


organism_name: Microbacterium canaveralium


organism_name: Shouchella phoenicis


organism_name: Peribacillus phoenicis


organism_name: Paenibacillus jepli


organism_name: Sphingomonas canaveralia


organism_name: Oceanobacillus phoenicis


organism_name: Bacillus kalamii


organism_name: Paenibacillus canaveralius


organism_name: Pseudomonas phoenicis


organism_name: Bacillus jepli


organism_name: Lysinibacillus phoenicis


organism_name: Parabacteroides merdae


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Roseburia hominis


organism_name: Klebsiella pneumoniae


organism_name: Salmonella enterica


asm_submitter: Centers for Disease Control and Prevention

organism_name: Staphylococcus aureus


organism_name: Blautia massiliensis (ex Durand et al. 2017)


organism_name: Faecalibacterium prausnitzii


organism_name: Lactobacillus gasseri


organism_name: Veillonella parvula


organism_name: Enterococcus faecalis


organism_name: Sellimonas intestinalis


organism_name: Megasphaera micronuciformis


organism_name: Thomasclavelia ramosa


organism_name: Mediterraneibacter faecis


organism_name: Bifidobacterium adolescentis


organism_name: Clostridium butyricum


organism_name: Lachnospira eligens


organism_name: Enterocloster sp.


organism_name: Coprococcus phoceensis


organism_name: Lachnospira sp.


organism_name: Streptococcus salivarius


organism_name: Blautia wexlerae


organism_name: Anaerostipes caccae


organism_name: Blautia sp.


organism_name: Bifidobacterium longum


organism_name: Blautia caecimuris


organism_name: Mediterraneibacter torques


organism_name: Paraclostridium sp.


organism_name: Clostridium paraputrificum


organism_name: Intestinibacter bartlettii


organism_name: Anaerococcus obesiensis


organism_name: Clostridium sp.


organism_name: Flavonifractor plautii


organism_name: Peptoniphilus sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Hoylesella buccalis


organism_name: Finegoldia magna


organism_name: Turicibacter sp.


organism_name: Thomasclavelia spiroformis


organism_name: Proteus mirabilis


organism_name: Eisenbergiella sp.


organism_name: Beduini sp.


organism_name: Clostridium cadaveris


organism_name: Ruthenibacterium lactatiformans


organism_name: Butyricicoccus sp.


organism_name: Blautia sp.


organism_name: Roseburia inulinivorans


organism_name: Faecalibacterium sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Anaerobutyricum soehngenii


organism_name: Neglectibacter timonensis


organism_name: Lachnospiraceae bacterium


organism_name: Roseburia intestinalis


organism_name: Coprobacillus cateniformis


organism_name: Anaerostipes hadrus


organism_name: Acutalibacter sp.


organism_name: Roseburia sp.


organism_name: Ruthenibacterium sp.


organism_name: Clostridia bacterium


organism_name: Gallintestinimicrobium sp.


organism_name: Oscillospiraceae bacterium


organism_name: Negativibacillus massiliensis


organism_name: Blautia hansenii


organism_name: Emergencia sp.


organism_name: Bilophila wadsworthia


organism_name: Monoglobus pectinilyticus


organism_name: Faecalibacillus intestinalis


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Escherichia coli


organism_name: Streptococcus sp.


organism_name: Waltera sp.


organism_name: [Ruminococcus] lactaris


organism_name: Flavonifractor plautii


organism_name: Lachnospira sp.


organism_name: Ruminococcus sp.


organism_name: Phocaeicola vulgatus


organism_name: Phascolarctobacterium faecium


organism_name: Bacteroides ovatus


organism_name: Parasutterella excrementihominis


organism_name: Christensenellaceae bacterium


organism_name: Evtepia gabavorous


organism_name: Clostridium sp.


organism_name: Clostridia bacterium


organism_name: Coprococcus sp.


organism_name: Agathobacter rectalis


organism_name: Faecalibacterium prausnitzii


excluded_from_refseq: contaminated; derived from metagenome; genome length too small

organism_name: Mediterraneibacter faecis


excluded_from_refseq: derived from metagenome

organism_name: Bacteroides caccae


organism_name: Eubacterium sp.


organism_name: Bifidobacterium pseudocatenulatum


organism_name: [Clostridium] leptum


organism_name: Oscillospiraceae bacterium


organism_name: Bifidobacterium bifidum


organism_name: Acutalibacteraceae bacterium


organism_name: Barnesiella intestinihominis


organism_name: Alistipes putredinis


organism_name: Akkermansia muciniphila


organism_name: Alistipes finegoldii


excluded_from_refseq: derived from metagenome; genome length too large

organism_name: Ruminococcus callidus


organism_name: Christensenellales bacterium


organism_name: Coprococcus phoceensis


organism_name: Hominenteromicrobium sp.


organism_name: Bacteroides uniformis


organism_name: Clostridia bacterium


organism_name: Segatella copri


organism_name: Dialister invisus


organism_name: Gemmiger formicilis


organism_name: Collinsella aerofaciens


organism_name: Subdoligranulum sp.


organism_name: Coprococcus sp.


organism_name: Ruminococcus sp.


organism_name: Mediterraneibacter faecis


organism_name: Slackia sp.


organism_name: Alistipes communis


organism_name: Streptococcus thermophilus


organism_name: Acutalibacteraceae bacterium


organism_name: Alistipes sp.


organism_name: Lacticaseibacillus rhamnosus


organism_name: Anaerobutyricum soehngenii


organism_name: Christensenellaceae bacterium


organism_name: Thomasclavelia ramosa


organism_name: Escherichia coli


organism_name: Veillonella parvula


organism_name: Limosilactobacillus pontis


organism_name: Streptococcus salivarius


organism_name: Clostridium perfringens


organism_name: Enterococcus faecalis


organism_name: Blautia wexlerae


organism_name: [Clostridium] innocuum


organism_name: Bifidobacterium dentium


organism_name: Akkermansia muciniphila


organism_name: Lachnospira eligens


organism_name: Sellimonas intestinalis


organism_name: Blautia sp.


organism_name: Enterococcus sp.


organism_name: Enterocloster sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Intestinibacter bartlettii


organism_name: Hungatella sp.


organism_name: Coprobacillus cateniformis


organism_name: Coprococcus phoceensis


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Clostridium butyricum


organism_name: Mediterraneibacter gnavus


organism_name: Blautia massiliensis (ex Durand et al. 2017)


organism_name: Bifidobacterium longum


organism_name: Zhenhengia sp.


organism_name: Eggerthella lenta


organism_name: Bifidobacterium adolescentis


organism_name: Enterocloster clostridioformis


organism_name: Waltera sp.


organism_name: Streptococcus sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; genome length too small

organism_name: Mediterraneibacter torques


organism_name: Streptococcus salivarius


organism_name: Ruthenibacterium lactatiformans


organism_name: Lachnospira sp.


organism_name: Longicatena caecimuris


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Ruminococcus sp.


organism_name: [Clostridium] symbiosum


organism_name: Enterocloster sp.


organism_name: Staphylococcus aureus


organism_name: Blautia hansenii


organism_name: Clostridium paraputrificum


organism_name: Mediterraneibacter gnavus


organism_name: Klebsiella michiganensis


organism_name: Enterococcus avium


organism_name: Flavonifractor plautii


organism_name: Veillonella parvula


organism_name: Thomasclavelia spiroformis


organism_name: Eisenbergiella sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Enterobacteriaceae bacterium


organism_name: Escherichia coli


organism_name: Proteus mirabilis


organism_name: Anaerostipes caccae


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome

organism_name: Turicibacter sp.


organism_name: Faecalibacterium sp.


organism_name: Acutalibacteraceae bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; many frameshifted proteins

organism_name: Dialister invisus


excluded_from_refseq: contaminated; annotation fails MAG completeness check; derived from metagenome

organism_name: Blautia sp.


organism_name: Anaerobutyricum soehngenii


organism_name: Neglectibacter timonensis


organism_name: Lachnospiraceae bacterium


organism_name: Eubacterium ramulus


organism_name: Faecalibacillus intestinalis


organism_name: Clostridium sp.


organism_name: Eubacterium sp.


organism_name: Lactococcus lactis


organism_name: Veillonella sp.


organism_name: Clostridia bacterium


organism_name: Anaerostipes hadrus


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; many frameshifted proteins

organism_name: Bilophila wadsworthia


organism_name: Roseburia inulinivorans


organism_name: Lachnospira sp.


organism_name: Streptococcus salivarius


organism_name: [Ruminococcus] lactaris


organism_name: Roseburia hominis


organism_name: Oscillospiraceae bacterium


organism_name: Agathobacter rectalis


organism_name: Waltera sp.


organism_name: Phascolarctobacterium faecium


organism_name: Roseburia intestinalis


organism_name: Hominenteromicrobium sp.


organism_name: Gallintestinimicrobium sp.


organism_name: Vescimonas sp.


organism_name: Dorea longicatena


organism_name: Akkermansia muciniphila


organism_name: Clostridium sp.


organism_name: Barnesiella intestinihominis


organism_name: Gemmiger formicilis


organism_name: Clostridia bacterium


organism_name: Bacteroides fragilis


organism_name: Bifidobacterium bifidum


organism_name: Acutalibacteraceae bacterium


organism_name: Phocaeicola vulgatus


organism_name: Faecalibacterium sp.


organism_name: Alistipes indistinctus


organism_name: Coprococcus sp.


organism_name: Christensenellales bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Eubacterium ventriosum


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Coprococcus phoceensis


organism_name: Ruminococcus callidus


organism_name: Subdoligranulum sp.


organism_name: Evtepia gabavorous


organism_name: Lachnospiraceae bacterium


excluded_from_refseq: contaminated; annotation fails MAG completeness check; derived from metagenome; many frameshifted proteins


organism_name: Christensenellaceae bacterium


organism_name: Ruminococcus sp.


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Dialister sp.


organism_name: Anaerovoracaceae bacterium


organism_name: Segatella copri


organism_name: Agathobacter rectalis


organism_name: Alistipes putredinis


organism_name: Acutalibacteraceae bacterium


organism_name: Collinsella aerofaciens


organism_name: Parasutterella excrementihominis


organism_name: Streptococcus thermophilus


organism_name: Eubacterium sp.


organism_name: [Clostridium] leptum


excluded_from_refseq: contaminated; annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; many frameshifted proteins

organism_name: Coprococcus sp.


organism_name: Anaerobutyricum hallii


organism_name: Paraclostridium sordellii


organism_name: Bacteroides uniformis


organism_name: Faecalibacillus intestinalis


organism_name: Clostridium perfringens


organism_name: Enterococcus faecium


organism_name: Lacticaseibacillus rhamnosus


organism_name: Enterococcus gallinarum


organism_name: Bilophila wadsworthia


organism_name: Actinomyces sp.


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Varibaculum sp.


organism_name: Enterocloster bolteae


organism_name: Eggerthella lenta


organism_name: Escherichia coli


organism_name: Streptococcus sp.


organism_name: Hungatella sp.


organism_name: Finegoldia magna


organism_name: Lacticaseibacillus paracasei


organism_name: [Clostridium] innocuum


organism_name: Dysgonomonas mossii


organism_name: Enterococcus durans


organism_name: Veillonella parvula


organism_name: Bifidobacterium longum


organism_name: Bifidobacterium breve


organism_name: Blautia wexlerae


organism_name: Flavonifractor plautii


organism_name: Haemophilus parainfluenzae


organism_name: Faecalibacterium prausnitzii


organism_name: Sellimonas intestinalis


organism_name: Mediterraneibacter gnavus


organism_name: Phocaeicola vulgatus


organism_name: Clostridium paraputrificum


organism_name: Eggerthella lenta


organism_name: Enterococcus avium


organism_name: Mediterraneibacter torques


excluded_from_refseq: contaminated; unverified source organism; derived from metagenome

organism_name: Ruminococcus sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Lachnospira eligens


organism_name: Roseburia sp.


organism_name: Blautia sp.


organism_name: Collinsella sp.


organism_name: Bacteroides ovatus


organism_name: Bacteroides fragilis


organism_name: Sutterella wadsworthensis


organism_name: Thomasclavelia ramosa


organism_name: Anaerostipes hadrus


organism_name: Agathobacter rectalis


organism_name: Alistipes finegoldii


organism_name: Streptococcus thermophilus


organism_name: Lachnospiraceae bacterium


organism_name: Streptococcus sp.


organism_name: Faecalibacillus intestinalis


organism_name: Streptococcus salivarius


organism_name: Clostridium fessum


organism_name: Intestinibacter bartlettii


organism_name: Faecalibacterium prausnitzii


organism_name: Ruminococcus callidus


organism_name: Clostridia bacterium


organism_name: [Clostridium] leptum


organism_name: Faecalibacterium sp.


organism_name: Blautia sp.


organism_name: Christensenellales bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Oscillospiraceae bacterium


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Eubacterium ventriosum


organism_name: Acutalibacteraceae bacterium


organism_name: Lachnospira pectinoschiza


organism_name: Christensenellaceae bacterium


organism_name: Parabacteroides distasonis


organism_name: Lachnospiraceae bacterium


organism_name: Alistipes putredinis


organism_name: Blautia massiliensis (ex Durand et al. 2017)


organism_name: Gemmiger formicilis


organism_name: Butyribacter sp.


organism_name: Ruminococcus sp.


organism_name: Bifidobacterium bifidum


organism_name: Enterococcus faecalis


organism_name: Bacteroides stercoris


organism_name: Mediterraneibacter faecis


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Oscillospiraceae bacterium


organism_name: Lacticaseibacillus rhamnosus


organism_name: Dorea longicatena


organism_name: Blautia sp.


organism_name: Butyricicoccaceae bacterium


organism_name: Eubacterium sp.


group: archaea

organism_name: Methanobrevibacter smithii


organism_name: Faecalibacillus faecis


organism_name: Haemophilus parainfluenzae


organism_name: Odoribacter splanchnicus


organism_name: Eubacteriales bacterium


organism_name: Coprococcus sp.


organism_name: Collinsella aerofaciens


organism_name: Faecalibacterium sp.


organism_name: Segatella copri


organism_name: Lachnospiraceae bacterium


organism_name: Clostridium sp.


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Oscillospiraceae bacterium


organism_name: Acutalibacteraceae bacterium


organism_name: [Eubacterium] siraeum


organism_name: Bifidobacterium adolescentis


organism_name: Bifidobacterium longum


organism_name: Romboutsia timonensis


organism_name: Blautia sp.


organism_name: Eubacterium sp.


organism_name: Roseburia sp.


organism_name: Ruminococcus sp.


excluded_from_refseq: from large multi-isolate project

organism_name: Campylobacter jejuni


excluded_from_refseq: derived from metagenome

organism_name: Akkermansia sp.


organism_name: Veillonella sp.


organism_name: Eubacteriales bacterium


organism_name: Parabacteroides merdae


organism_name: Dialister invisus


organism_name: Subdoligranulum sp.


organism_name: Evtepia gabavorous


organism_name: Bacteroides uniformis


organism_name: Bifidobacterium catenulatum


organism_name: Waltera sp.


organism_name: Anaerobutyricum hallii


organism_name: Oscillospiraceae bacterium


organism_name: Haemophilus parainfluenzae


organism_name: Klebsiella planticola


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Veillonella atypica


organism_name: Lactobacillus gasseri


organism_name: Bifidobacterium pseudocatenulatum


infraspecific_name: strain=179-B 5C NHS

organism_name: Micrococcus luteus


infraspecific_name: strain=179-B 1A2 NHS

organism_name: Microbacterium pasadenense


infraspecific_name: strain=179-I 1D4 NHS


infraspecific_name: strain=179-A 4D2 NHS

organism_name: Aeromicrobium jepli


infraspecific_name: strain=179-I 3D4 NHS

organism_name: Microbacterium californiense


infraspecific_name: strain=179-A 10B2 NHS

organism_name: Ferdinandcohnia jepli


infraspecific_name: strain=179-I 3D2 NHS

organism_name: Microbacterium martis


infraspecific_name: strain=179-I 3D3 NHS


infraspecific_name: strain=179-B 7A NHS

organism_name: Novosphingobium panipatense


infraspecific_name: strain=179-C 4.4 NHS

organism_name: Mycolicibacterium litorale


infraspecific_name: strain=179-I 4A1 NHS

organism_name: Solibacillus isronensis


infraspecific_name: strain=179-C1.1 NHS

organism_name: Brevibacillus jepli


infraspecific_name: strain=179-C 4.3 NHS

organism_name: Priestia aryabhattai


infraspecific_name: strain=179-F B1.2 NHS

organism_name: Peribacillus frigoritolerans


infraspecific_name: strain=179-F 6A4 NHS

organism_name: Paenibacillus xylanilyticus


organism_name: Intestinibacter bartlettii


infraspecific_name: strain=179-I 5C2 NHS

organism_name: Paenibacillus taichungensis


infraspecific_name: strain=179-F B3.2 NHS

organism_name: Metabacillus niabensis


organism_name: Veillonella rogosae


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Lacrimispora saccharolytica


organism_name: Enterocloster sp.


organism_name: [Clostridium] symbiosum


organism_name: Clostridium paraputrificum


organism_name: Allofournierella massiliensis


organism_name: Hungatella sp.


organism_name: Mediterraneibacter gnavus


organism_name: Sellimonas intestinalis


organism_name: Hominilimicola sp.


organism_name: Pseudoruminococcus massiliensis


organism_name: Ruminococcus sp.


organism_name: Agathobaculum sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Agathobacter rectalis


organism_name: Alistipes sp.


organism_name: Christensenellaceae bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Intestinibacter sp.


organism_name: Coprococcus sp.


organism_name: Roseburia faecis


organism_name: Evtepia sp.


organism_name: Blautia massiliensis (ex Durand et al. 2017)


organism_name: Eubacterium sp.


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Waltera sp.


organism_name: Gemmiger formicilis


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Blautia sp.


organism_name: Anaerostipes hadrus


organism_name: Faecalibacillus intestinalis


organism_name: Collinsella sp.


organism_name: Lactococcus lactis


organism_name: Bacteroides caccae


organism_name: [Clostridium] scindens


organism_name: Subdoligranulum sp.


organism_name: Lachnospira eligens


organism_name: Mediterraneibacter torques


organism_name: Roseburia hominis


excluded_from_refseq: contaminated; annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome

organism_name: Dorea sp.


organism_name: Ruminococcus sp.


organism_name: Ruminococcus callidus


organism_name: Eggerthella lenta


organism_name: Bacteroides fragilis


organism_name: Dorea longicatena


organism_name: Bilophila wadsworthia


organism_name: Anaerobutyricum hallii


organism_name: Odoribacter splanchnicus


organism_name: Faecalibacterium sp.


organism_name: Eubacterium sp.


organism_name: Alistipes putredinis


organism_name: Waltera sp.


organism_name: Varibaculum timonense


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Lachnospiraceae bacterium


organism_name: Clostridium sp.


organism_name: Clostridia bacterium


organism_name: Lachnospira pectinoschiza


organism_name: Dysosmobacter sp.


organism_name: Ruthenibacterium lactatiformans


organism_name: Faecalibacterium prausnitzii


organism_name: Alistipes sp.


organism_name: Oscillospiraceae bacterium


organism_name: Vibrio cholerae


organism_name: Sutterella wadsworthensis


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; many frameshifted proteins

organism_name: Paraprevotella clara


organism_name: Bifidobacterium pseudocatenulatum


organism_name: [Ruminococcus] lactaris


organism_name: Enterococcus faecalis


organism_name: Bacteroides uniformis


organism_name: Bifidobacterium catenulatum


organism_name: Vibrio metschnikovii


organism_name: Bifidobacterium bifidum


organism_name: Eubacterium sp.


organism_name: Bacteroides stercoris


organism_name: Acutalibacteraceae bacterium


organism_name: Intestinibacter bartlettii


organism_name: Alistipes onderdonkii


organism_name: Ruminococcus sp.


organism_name: Campylobacter jejuni


organism_name: Vibrio cholerae


organism_name: Anaerovoracaceae bacterium


organism_name: Dorea formicigenerans


organism_name: Thomasclavelia spiroformis


organism_name: Agathobacter rectalis


excluded_from_refseq: contaminated; annotation fails MAG completeness check; derived from metagenome

organism_name: Coprococcus phoceensis


organism_name: Parasutterella sp.


organism_name: Holdemania massiliensis


organism_name: Parabacteroides merdae


organism_name: Streptococcus thermophilus


organism_name: Roseburia sp.


organism_name: Dialister invisus


organism_name: Segatella copri


organism_name: Oscillospiraceae bacterium


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; many frameshifted proteins

organism_name: Alistipes indistinctus


organism_name: Phocaeicola vulgatus


excluded_from_refseq: abnormal gene to sequence ratio; annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; many frameshifted proteins

organism_name: Clostridium fessum


organism_name: Gallintestinimicrobium sp.


organism_name: Alistipes finegoldii


organism_name: Finegoldia magna


organism_name: Alistipes shahii


organism_name: Enterococcus faecium


organism_name: Peptoniphilus harei


organism_name: Enterocloster sp.


organism_name: [Clostridium] innocuum


organism_name: Mediterraneibacter gnavus


organism_name: Escherichia coli


organism_name: Streptococcus thermophilus


organism_name: Thomasclavelia ramosa


organism_name: Bifidobacterium longum


organism_name: Alistipes putredinis


organism_name: Streptococcus lutetiensis


organism_name: Enterocloster bolteae


organism_name: Blautia hansenii


organism_name: Anaerostipes caccae


organism_name: Faecalibacterium prausnitzii


organism_name: Flavonifractor plautii


organism_name: Veillonella sp.


organism_name: Eggerthella lenta


organism_name: Clostridioides difficile


organism_name: Enterocloster sp.


organism_name: Clostridia bacterium


organism_name: Bacteroides thetaiotaomicron


organism_name: Thomasclavelia sp.


organism_name: Lachnospiraceae bacterium


organism_name: Eisenbergiella sp.


organism_name: Alitiscatomonas sp.


organism_name: Enterobacter hormaechei


organism_name: Alistipes onderdonkii


organism_name: Bifidobacterium longum


organism_name: Blautia sp.


organism_name: Bifidobacterium breve


organism_name: Enterococcus avium


excluded_from_refseq: contaminated; annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; many frameshifted proteins

organism_name: Intestinimonas sp.


organism_name: Hominilimicola sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Lachnospirales bacterium


organism_name: Acutalibacteraceae bacterium


organism_name: Eubacterium sp.


organism_name: Bacilli bacterium


organism_name: Vibrio cholerae


organism_name: Lachnospira sp.


organism_name: Vibrio metschnikovii


organism_name: Bilophila wadsworthia


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Montevideo


asm_submitter: Sungkyunkwan University

organism_name: Thaumasiovibrio clandestinus


organism_name: Glaciecola sp. MF2-115


organism_name: Vibrio parahaemolyticus


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Klebsiella pneumoniae


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Vibrio cholerae


organism_name: Vibrio harveyi


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


organism_name: Enterococcus faecalis


organism_name: Campylobacter upsaliensis


organism_name: Vibrio metschnikovii


organism_name: Vibrio parahaemolyticus


organism_name: Enterococcus faecium


organism_name: Salmonella enterica subsp. enterica serovar Alachua


asm_submitter: FDA/CFSAN


organism_name: Enterococcus hirae


organism_name: Acinetobacter baumannii


organism_name: Salmonella enterica subsp. enterica serovar Chailey


organism_name: Salmonella enterica subsp. enterica serovar Rissen


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Klebsiella pneumoniae


organism_name: Vibrio cholerae


organism_name: Pseudomonas aeruginosa


organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Enterococcus faecalis


organism_name: Vibrio parahaemolyticus


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Listeria monocytogenes


organism_name: Acinetobacter baumannii


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Enterobacter hormaechei


organism_name: Salmonella enterica subsp. enterica


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica


organism_name: Serratia marcescens


organism_name: Salmonella enterica subsp. enterica serovar Kiambu


organism_name: Salmonella enterica subsp. enterica serovar Give


organism_name: Salmonella enterica subsp. enterica serovar Muenster


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Worthington


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Cannstatt


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Newport


asm_submitter: University of Chinese Academy of Sciences

organism_name: Enterococcus thailandicus


organism_name: Enterococcus avium


asm_submitter: National Institute of Food and Drug Safety Evaluation


organism_name: Enterococcus gallinarum


organism_name: Enterobacter hormaechei


organism_name: Klebsiella pneumoniae


organism_name: Enterococcus durans


organism_name: Citrobacter freundii


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Enterococcus casseliflavus


organism_name: Pseudomonas aeruginosa


organism_name: Enterococcus faecium


organism_name: Enterococcus faecalis


organism_name: Enterococcus hirae


organism_name: Enterococcus lactis


asm_submitter: Jiangxi Normal University

organism_name: Bacillus velezensis


asm_submitter: Jilin Agricultural Science and Technology University

excluded_from_refseq: fragmented assembly

organism_name: Aeromonas salmonicida


asm_submitter: University of the Philippines Los Banos

organism_name: Pseudomonas piscis


asm_submitter: Jiangsu Normal University

infraspecific_name: strain=DSM 43180

organism_name: Streptosporangium longisporum


asm_submitter: JiLin Agricultural Science and Technology University


infraspecific_name: strain=NNEfa 3079


asm_submitter: Inner Mongolia Agricultural Univercity

excluded_from_refseq: annotation fails completeness check

organism_name: Lactiplantibacillus plantarum


infraspecific_name: strain=NNEfa 3118


infraspecific_name: strain=NNEfa 3120


asm_submitter: USP


asm_submitter: Ural Scientific Research Institute of Maternity and Child Care


asm_submitter: University of Carthage

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins


asm_submitter: Tarim University

organism_name: Staphylococcus aureus


infraspecific_name: strain=NNEfae 2894


organism_name: Escherichia coli


asm_submitter: NATIONAL INSTITUTE OF BIOTECHNOLOGY(NIB)

infraspecific_name: strain=EBDCYA 7

organism_name: Nostoc piscinale EBDCYA 7


excluded_from_refseq: many frameshifted proteins


asm_submitter: Sir Run Run Shaw Hospital, School of Medicine, Zhejiang University

organism_name: Streptococcus pneumoniae


asm_submitter: Zhejiang Cancer Hospital

organism_name: Acinetobacter baumannii


asm_submitter: Quanzhou Normal University

organism_name: Rhodospirillum sp. A1_3_36


asm_submitter: IHU Mediterranee Infection

organism_name: Bartonella propinqua


asm_submitter: University Hospital Muenster


organism_name: Staphylococcus argenteus


asm_submitter: Public Health England

excluded_from_refseq: from large multi-isolate project

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


asm_submitter: FDA/CFSAN

organism_name: Listeria monocytogenes


asm_submitter: Center for Food Safety and Applied Nutrition

organism_name: Salmonella enterica


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Kentucky


asm_submitter: USDA FSIS


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: National Center for Biotechnology Information

organism_name: Klebsiella pneumoniae


organism_name: Streptococcus pyogenes


organism_name: Neisseria meningitidis


asm_submitter: CDC


organism_name: Salmonella enterica subsp. enterica serovar Kiambu


organism_name: Klebsiella variicola subsp. variicola


organism_name: Klebsiella quasipneumoniae subsp. quasipneumoniae


organism_name: Klebsiella quasipneumoniae subsp. similipneumoniae


organism_name: Salmonella enterica subsp. enterica serovar Chailey


asm_submitter: University of KwaZulu-Natal


excluded_from_refseq: contaminated


organism_name: Escherichia coli


annotation_name: Annotation submitted by Anqing First People's Hospital of Anhui Medical University

organism_name: Acinetobacter baumannii


annotation_provider: Anqing First People's Hospital of Anhui Medical University


asm_submitter: Anqing First People's Hospital of Anhui Medical University


asm_submitter: Sun Yat-sen University

infraspecific_name: strain=SYSU DXS3258

organism_name: Rubrilithobacter danxiaensis


asm_submitter: University of Plymouth

organism_name: Psychrobacter sp. AT9


asm_submitter: Los Angeles County Public Health Lab microbial pathogen submission group

organism_name: Corynebacterium diphtheriae


asm_submitter: The University of Texas MD Anderson Cancer Center

organism_name: Lactobacillus iners


asm_submitter: Washington University in Saint Louis

excluded_from_refseq: derived from metagenome

organism_name: Gallintestinimicrobium sp.


organism_name: Streptococcus pneumoniae


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Enterobacter cloacae complex sp. 2024EL-00786


asm_submitter: West China Hospital, Sichuan University

organism_name: Mycolicibacterium nivoides


organism_name: Enterobacter cloacae complex sp. 2024EL-00780


organism_name: Enterobacter cloacae complex sp. 2024EL-00779


organism_name: Enterobacter cloacae complex sp. 2024EL-00778


organism_name: Enterobacter cloacae complex sp. 2024EL-00781


asm_submitter: Shanxi University

organism_name: Staphylococcus epidermidis


infraspecific_name: strain=NNEfa 2881

organism_name: Enterococcus faecalis


asm_submitter: Tamil Nadu Agricultural University

organism_name: Bacillus subtilis


asm_submitter: LMU Munich

organism_name: Pseudomonas ogarae


asm_submitter: SRCAMB

organism_name: Klebsiella pneumoniae


asm_submitter: San Diego State University

organism_name: Vibrio alginolyticus


infraspecific_name: strain=SCPM-O-B-14077 (KZN9-23)


infraspecific_name: strain=SCPM-O-B-14072 (KZN4-23)


infraspecific_name: strain=SCPM-O-B-14071 (KZN2-23)


infraspecific_name: strain=SCPM-O-B-14075 (KZN7-23)


infraspecific_name: strain=SCPM-O-B-14076 (KZN8-23)


infraspecific_name: strain=SCPM-O-B-14070 (KZN1-23)


organism_name: Streptococcus pyogenes


infraspecific_name: strain=SCPM-O-B-14074 (KZN6-23)


infraspecific_name: strain=SCPM-O-B-14073 (KZN5-23)


organism_name: Escherichia coli


excluded_from_refseq: contaminated; from large multi-isolate project


infraspecific_name: strain=SCPM-O-B-8968 (U122)


infraspecific_name: strain=SCPM-O-B-8967 (U120)


infraspecific_name: strain=SCPM-O-B-10472 (U99)


infraspecific_name: strain=SCPM-O-B-10470 (U76)


infraspecific_name: strain=SCPM-O-B-10487 (U29)


infraspecific_name: strain=SCPM-O-B-10468 (U74)


infraspecific_name: strain=SCPM-O-B-10486 (U30)


infraspecific_name: strain=SCPM-O-B-10482 (U239B)


infraspecific_name: strain=SCPM-O-B-10485 (U7)


infraspecific_name: strain=SCPM-O-B-10473 (U99m)


infraspecific_name: strain=SCPM-O-B-10467 (U71)


infraspecific_name: strain=SCPM-O-B-10466 (U51)


asm_submitter: Shandong University

organism_name: Amaricoccus sp. W119


organism_name: Tritonibacter mobilis


asm_submitter: CSIR-National Institute of Oceanography

organism_name: Bacillus sp. NIO_002


asm_submitter: Mohammed V University

organism_name: Sinorhizobium meliloti


asm_submitter: Hefei University of Technology

infraspecific_name: strain=BP

organism_name: Stutzerimonas degradans


asm_submitter: Institute of Gene Biology Russian Academy of Sciences

infraspecific_name: strain=Blanco

organism_name: Thermus oshimai


asm_submitter: Institute of Soil Science, Chinese Academy of Sciences

organism_name: Anabaena azotica SJ-1


asm_submitter: Huainan Normal University


asm_submitter: Su Dong


asm_submitter: Anhui Science and Technology Universuty

organism_name: Pasteurella multocida subsp. multocida


asm_submitter: National Center for Biotechnology Information


organism_name: Klebsiella variicola subsp. variicola


asm_submitter: China Agricultural University

organism_name: Staphylococcus aureus


asm_submitter: University of Sao Paulo

organism_name: Capilliphycus salinus ALCB114379


asm_submitter: Latvian Biomedical Research and Study Centre

infraspecific_name: strain=JK

organism_name: Aeromonas salmonicida


organism_name: Klebsiella quasipneumoniae subsp. quasipneumoniae


asm_submitter: Chinese Academy of Agricultural Sciences

organism_name: Sinomonas flava


asm_submitter: Zhejiang Gongshang University

organism_name: Lactiplantibacillus plantarum


asm_submitter: Vestfold Hospital Trust

organism_name: Bacteroides hominis


organism_name: Klebsiella quasipneumoniae subsp. similipneumoniae


asm_submitter: Public Health England

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


asm_submitter: FDA


asm_submitter: China University of Geosciences

organism_name: Prochlorococcus marinus


organism_name: Synechococcus sp.


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

isolate: human

organism_name: Klebsiella pneumoniae


asm_submitter: The University of Sydney

organism_name: Flavobacterium covae


asm_submitter: Centers for Disease Control and Prevention


asm_submitter: FDA/CFSAN


organism_name: Streptococcus pyogenes


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Vibrio cholerae


asm_submitter: Michigan Department of Health and Human Services


organism_name: Acinetobacter baumannii


asm_submitter: CDC

organism_name: Salmonella enterica subsp. enterica serovar Kiambu


asm_submitter: National Center for Biotechnology Information

organism_name: Pseudomonas aeruginosa


organism_name: Yersinia enterocolitica


asm_submitter: Argonne National Laboratory

organism_name: Bacillus anthracis


asm_submitter: University of Michigan

organism_name: Prevotella histicola


asm_submitter: Hannam University

organism_name: Microbulbifer jejuensis


asm_submitter: Universite catholique de Louvain


asm_submitter: Los Angeles County Public Health Lab microbial pathogen submission group


organism_name: Escherichia coli


organism_name: Haemophilus influenzae


organism_name: Streptococcus pneumoniae


asm_submitter: Chongqing Medical University

organism_name: Alteromonas sp. AMM-1


asm_submitter: Guizhou Medical University

organism_name: Streptococcus lishijunsis


asm_submitter: University of Nigeria, Nsukka, Nigeria


asm_submitter: University of Pretoria


infraspecific_name: strain=NNEfae 3119

organism_name: Enterococcus faecium


asm_submitter: Indrashil University

organism_name: Weissella cibaria


infraspecific_name: strain=NNEc 2662


asm_submitter: Sichuan Agricultural University

organism_name: Bacillus velezensis


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


organism_name: Klebsiella ornithinolytica


organism_name: Providencia huaxiensis


organism_name: Acinetobacter baumannii


organism_name: Enterobacter cloacae complex sp. 2023EL-00624


asm_submitter: INRAE

isolate: Pf-FR

organism_name: Candidatus Phloeobacter fragariae


isolate: Ap-FR


organism_name: Klebsiella pneumoniae


isolate: Ap-CH


organism_name: Bacillus anthracis


infraspecific_name: strain=NNEc 2847


organism_name: Pseudomonas aeruginosa


asm_submitter: KAMDHENU UNIVERSITY


asm_submitter: SRM Institute of Science and Technology


asm_submitter: Sun Yat sen University


asm_submitter: SIAT

organism_name: Corynebacterium kefirresidentii


asm_submitter: The University of Texas MD Anderson Cancer Center

organism_name: Lactobacillus iners


asm_submitter: Public Health England

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


excluded_from_refseq: unverified source organism; from large multi-isolate project


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


organism_name: Citrobacter amalonaticus


asm_submitter: Souter Illinois University Carbondale

organism_name: Erwinia sp. LJJL01


asm_submitter: Shenzhen Second People's Hospital

organism_name: Herbaspirillum huttiense


asm_submitter: Langfang Normal University

organism_name: Glutamicibacter sp. FR1


asm_submitter: Chongqing Academy of Agricultural Sciences,

organism_name: Bacillus velezensis


asm_name: Brevibacterium sp. strain GP-SGM9

asm_submitter: University of Johannesburg

organism_name: Brevibacterium sp. GP-SGM9


asm_submitter: New Mexico Tech

organism_name: Sulfuriferula sp. GW1


asm_submitter: Guizhou University

infraspecific_name: strain=GUMHT p116


asm_submitter: Zhejiang University

organism_name: Acinetobacter zhairuonensis


asm_submitter: Seoul Metropolitan Government Research Institute of Public Health and Environment

organism_name: Escherichia coli


asm_submitter: Nantong Center for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: yinfei fang

organism_name: Klebsiella pneumoniae


asm_submitter: QIBEBT

organism_name: Crateriforma spongiae


asm_submitter: South China Agricultural University


asm_submitter: Central South University

organism_name: Acidithiobacillus ferriphilus


asm_submitter: Sir Run Run Shaw Hospital, School of Medicine, Zhejiang University

organism_name: Streptococcus pneumoniae


asm_submitter: The University of Queensland

excluded_from_refseq: unverified source organism

organism_name: Ornithobacterium rhinotracheale


asm_submitter: Ocean University of China

organism_name: Bacillus mojavensis


asm_submitter: Chung Ang University

organism_name: Bifidobacterium breve


asm_submitter: Jet Propulsion Laboratory, California Institute of Technology

organism_name: Brevundimonas phoenicis


asm_submitter: IMPERIAL COLLEGE LONDON


asm_submitter: Nanyang Technological University

organism_name: Acinetobacter baumannii


organism_name: Lysinibacillus canaveralius


organism_name: Microbacterium pratiae


organism_name: Robertmurraya phoenicis


organism_name: Pseudomonas phoenicis


organism_name: Neobacillus phoenicis


organism_name: Georgenia phoenicis


organism_name: Microbacterium phoenicis


asm_submitter: Public Health England

organism_name: Campylobacter coli


organism_name: Alkalihalobacillus phoenicis


organism_name: Agrococcus phoenicis


asm_submitter: Chung-Ang university

organism_name: Pseudoalteromonas sp. KJ71-7


organism_name: Vibrio sp. MA40-2


asm_submitter: Huazhong Agricultural University

organism_name: Bdellovibrio sp. HCB185ZH


organism_name: Bdellovibrio sp. HCB337


asm_submitter: Korea National Institute of Health

organism_name: Mycobacterium tuberculosis


asm_submitter: Oregon State University - Cascades

organism_name: Paenibacillus amylolyticus


organism_name: Paenibacillus taichungensis


asm_submitter: University of Arizona

organism_name: Bacillus subtilis


organism_name: Bacillus inaquosorum


organism_name: Bacillus velezensis


asm_submitter: Guizhou Academy of Agricultural Sciences


asm_submitter: Drexel University College of Medicine

organism_name: Haemophilus influenzae


asm_submitter: New York State GenomeTrakr

organism_name: Vibrio parahaemolyticus


asm_submitter: Shanghai Jiaotong University

organism_name: Pyrococcus kukulkanii


asm_submitter: Chinese Academy of Sciences

organism_name: Erwinia persicina


asm_submitter: The Second Affiliated Hospital of Soochow University

organism_name: Enterobacter hormaechei subsp. xiangfangensis


asm_submitter: Massachusetts Institute of Technology

organism_name: Prochlorococcus sp. Dvax-bc1017


organism_name: Synechococcus sp. Cu2B8-bc1011


infraspecific_name: strain=MIT 1012

organism_name: Prochlorococcus marinus str. MIT 1012


infraspecific_name: strain=MIT 0714

organism_name: Prochlorococcus sp. MIT 0714


organism_name: Prochlorococcus marinus str. SS2


infraspecific_name: strain=MIT S9506

organism_name: Synechococcus sp. MIT S9506


infraspecific_name: strain=WH 8017

organism_name: Synechococcus sp. WH 8017


infraspecific_name: strain=MIT 9107

organism_name: Prochlorococcus marinus str. MIT 9107


infraspecific_name: strain=MIT 0718

organism_name: Prochlorococcus sp. MIT 0718


asm_submitter: North Carolina State University

organism_name: Duganella sp. CT11-25


organism_name: Azospirillum sp. CT11-132


organism_name: Prochlorococcus marinus str. SS51


infraspecific_name: strain=MIT 0702

organism_name: Prochlorococcus sp. MIT 0702


organism_name: Prochlorococcus marinus str. GP2


organism_name: Massilia sp. CT11-137


infraspecific_name: strain=LG

organism_name: Prochlorococcus marinus str. LG


organism_name: Massilia sp. CT11-108


asm_submitter: National Center for Biotechnology Information

organism_name: Legionella pneumophila


organism_name: Prochlorococcus sp. SS52


infraspecific_name: strain=MIT 0707

organism_name: Prochlorococcus sp. MIT 0707


excluded_from_refseq: genome length too large

infraspecific_name: strain=MIT 9303

organism_name: Prochlorococcus marinus str. MIT 9303


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


infraspecific_name: strain=MIT S1220

organism_name: Synechococcus sp. MIT S1220


infraspecific_name: strain=MIT S9509

organism_name: Synechococcus sp. MIT S9509


infraspecific_name: strain=MIT S9508

organism_name: Synechococcus sp. MIT S9508


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Alachua


organism_name: Salmonella enterica subsp. enterica serovar Anatum


infraspecific_name: strain=MIT 1313

organism_name: Prochlorococcus sp. MIT 1313


infraspecific_name: strain=MIT 1312

organism_name: Prochlorococcus sp. MIT 1312


infraspecific_name: strain=MIT 0603

organism_name: Prochlorococcus sp. MIT 0603


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Duganella sp. CT11-72


organism_name: Kosakonia cowanii


organism_name: Curtobacterium sp. CT11-45


organism_name: Polaromonas sp. CT11-55


infraspecific_name: strain=MIT 1227

organism_name: Prochlorococcus sp. MIT 1227


organism_name: Variovorax sp. CT11-76


organism_name: Pseudomonas sp. CT11-2


organism_name: Agrobacterium tumefaciens


infraspecific_name: strain=MIT 1201

organism_name: Prochlorococcus sp. MIT 1201


organism_name: Curtobacterium sp. CT11-133


organism_name: Stenotrophomonas geniculata


infraspecific_name: strain=MIT 0703

organism_name: Prochlorococcus sp. MIT 0703


organism_name: Campylobacter jejuni


infraspecific_name: strain=MIT 0701

organism_name: Prochlorococcus sp. MIT 0701


infraspecific_name: strain=MIT 9116

organism_name: Prochlorococcus sp. MIT 9116


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Klebsiella pneumoniae


infraspecific_name: strain=MIT 9314

organism_name: Prochlorococcus sp. MIT 9314


organism_name: Klebsiella oxytoca


asm_submitter: Public Health England

organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Kosakonia cowanii


organism_name: Pseudomonas sp. Pseusp88


organism_name: Telluria sp. Tellsp99


organism_name: Pseudomonas sp. Pseusp97


organism_name: Variovorax sp. Varisp85


infraspecific_name: strain=MIT S9510

organism_name: Synechococcus sp. MIT S9510


organism_name: Variovorax sp. Varisp62


organism_name: Mucilaginibacter sp. Mucisp84


organism_name: Duganella sp. Dugasp56


organism_name: Rhizobium pisi


organism_name: Rhizobium sp. Rhizsp42


infraspecific_name: strain=MIT S9503

organism_name: Synechococcus sp. MIT S9503


organism_name: Paenarthrobacter nicotinovorans


organism_name: Priestia megaterium


organism_name: Pseudomonas sp. Pseusp3


organism_name: Variovorax sp. Varisp36


infraspecific_name: strain=MIT S9452

organism_name: Synechococcus sp. MIT S9452


organism_name: Sphingomonas sp. Sphisp140


organism_name: Kosakonia cowanii


organism_name: Telluria sp. Tellsp131


organism_name: Stenotrophomonas geniculata


organism_name: Ralstonia sp. Ralssp135


organism_name: Herbaspirillum frisingense


organism_name: Pseudomonas sp. Pseusp122


organism_name: Pseudomonas sp. Pseusp11


organism_name: Telluria sp. Tellsp104


infraspecific_name: strain=MIT 1342

organism_name: Prochlorococcus sp. MIT 1342


infraspecific_name: strain=MIT 1318

organism_name: Prochlorococcus sp. MIT 1318


infraspecific_name: strain=MIT 1306

organism_name: Prochlorococcus sp. MIT 1306


infraspecific_name: strain=MIT 9401

organism_name: Prochlorococcus sp. MIT 9401


infraspecific_name: strain=MIT 9322

organism_name: Prochlorococcus sp. MIT 9322


infraspecific_name: strain=MIT S9501

organism_name: Synechococcus sp. MIT S9501


infraspecific_name: strain=WH 6501

organism_name: Synechococcus sp. WH 6501


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Staphylococcus pseudintermedius


organism_name: Prochlorococcus marinus str. SS35


infraspecific_name: strain=MIT 0602

organism_name: Prochlorococcus sp. MIT 0602


infraspecific_name: strain=MIT 0601

organism_name: Prochlorococcus sp. MIT 0601


organism_name: Acinetobacter baumannii


organism_name: Prochlorococcus marinus str. PAC1


infraspecific_name: strain=MIT 9311

organism_name: Prochlorococcus sp. MIT 9311


infraspecific_name: strain=MIT S9220

organism_name: Synechococcus sp. MIT S9220


infraspecific_name: strain=MIT S9507

organism_name: Synechococcus sp. MIT S9507


infraspecific_name: strain=MIT S9451

organism_name: Synechococcus sp. MIT S9451


asm_submitter: CDC

organism_name: Salmonella enterica subsp. enterica serovar Kiambu


organism_name: Salmonella enterica subsp. enterica serovar Newport


infraspecific_name: strain=MIT 1327

organism_name: Prochlorococcus sp. MIT 1327


organism_name: Klebsiella pneumoniae


organism_name: Klebsiella ornithinolytica


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


infraspecific_name: strain=MIT 1323

organism_name: Prochlorococcus sp. MIT 1323


organism_name: Salmonella enterica subsp. enterica serovar Worthington


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Infantis


infraspecific_name: strain=MIT 1304

organism_name: Prochlorococcus sp. MIT 1304


infraspecific_name: strain=MIT 1205

organism_name: Prochlorococcus sp. MIT 1205


organism_name: Prochlorococcus sp. MED1


infraspecific_name: strain=MIT 9201

organism_name: Prochlorococcus marinus str. MIT 9201


infraspecific_name: strain=MIT 9123

organism_name: Prochlorococcus sp. MIT 9123


infraspecific_name: strain=MIT 9321

organism_name: Prochlorococcus sp. MIT 9321


infraspecific_name: strain=MIT 0916

organism_name: Prochlorococcus sp. MIT 0916


organism_name: Salmonella enterica subsp. enterica serovar Anatum


infraspecific_name: strain=SB

organism_name: Prochlorococcus marinus str. SB


infraspecific_name: strain=MIT 1011

organism_name: Prochlorococcus sp. MIT 1011


asm_submitter: University of Chinese Academy of Sciences

organism_name: Escherichia fergusonii


organism_name: Klebsiella pneumoniae


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


asm_submitter: University of Oxford

organism_name: Staphylococcus epidermidis


asm_submitter: Ghent University

organism_name: Streptomyces sp. R-74717


asm_submitter: US Food and Drug Administration

organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: University of Florida

organism_name: Helcococcus ovis


asm_submitter: University of California, Irvine

organism_name: Proteus mirabilis


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


asm_submitter: Universiti Sains Malaysia

organism_name: Bacillus sp. 3P20


asm_submitter: La Trobe University

organism_name: Serratia marcescens


organism_name: Citrobacter koseri


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Enterobacter hormaechei


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Serratia ureilytica


organism_name: Klebsiella pneumoniae


organism_name: Citrobacter amalonaticus


asm_submitter: Jiangsu Normal University

organism_name: Citricoccus nitrophenolicus


asm_submitter: Yunnan Agricultural University

organism_name: Bacillus velezensis


asm_submitter: Nankai University

organism_name: Halomonas cupida


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Pseudomonas aeruginosa


organism_name: Citrobacter freundii


organism_name: Klebsiella oxytoca


asm_submitter: Huazhong Agricultural University

organism_name: Bdellovibrio sp. HCB117


organism_name: Bdellovibrio sp. HCB290


organism_name: Bdellovibrio sp. HCB288


asm_submitter: FDA

organism_name: Campylobacter coli


asm_submitter: National Center for Biotechnology Information

organism_name: Acinetobacter baumannii


organism_name: Bdellovibrio sp. HCB209


organism_name: Bdellovibrio sp. HCB274


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Enterobacter hormaechei


asm_submitter: FDA Center for Food Safety and Applied Nutrition

organism_name: Cronobacter malonaticus


organism_name: Proteus mirabilis


organism_name: Cronobacter sakazakii


organism_name: Klebsiella pneumoniae


asm_submitter: Chulalongkorn University

organism_name: Microbacterium sp. OR16


asm_submitter: The University of Maine

organism_name: Pectobacterium versatile


asm_submitter: XINJIANG INSTITUTE OF ECOLOGY AND GEOGRAPHY

infraspecific_name: strain=ES 120

organism_name: Bacillus velezensis


organism_name: Microbacterium sp. OR21


asm_submitter: Tsinghua university

organism_name: Dehalococcoides mccartyi


asm_submitter: Prince of Songkla University

organism_name: Vibrio vulnificus


asm_submitter: University of Sao Paulo

organism_name: Salmonella enterica subsp. enterica


asm_submitter: General Hospital of Ningxia Medical University

organism_name: Escherichia coli


asm_submitter: University of Vienna

organism_name: Bacteroides thetaiotaomicron


organism_name: Parabacteroides distasonis


asm_submitter: Northeast Forestry University

organism_name: Bacillus sp. A31


organism_name: Phocaeicola vulgatus


organism_name: Bacteroides fragilis


organism_name: Phocaeicola dorei


organism_name: Bacteroides ovatus


organism_name: Bacteroides xylanisolvens


organism_name: Bacteroides uniformis


organism_name: Parabacteroides merdae


asm_submitter: United States Department of Agriculture

organism_name: Commensalibacter sp. A3DC


asm_submitter: Indian Institute of Technology Roorkee

organism_name: Staphylococcus aureus


asm_submitter: University of Crete

organism_name: Brucella sp. H1_1004


organism_name: Staphylococcus hominis


organism_name: Staphylococcus epidermidis


asm_submitter: North-west University

organism_name: Priestia megaterium


organism_name: Bacillus safensis


asm_submitter: UNICAMP

organism_name: Bacillus sp. ZCB01


asm_submitter: Hungarian University of Agriculture and Life Sciences

organism_name: Pantoea sp. B65


asm_submitter: Instituto de Quimica

excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Actinomadura sp.


asm_submitter: Qingdao Agricultural university


asm_submitter: Shenzhen Institute of Guangdong Ocean University

organism_name: Maricaulis sp. D1M11


asm_submitter: Korea Food Research Institute

infraspecific_name: strain=NCCP 13719

organism_name: Escherichia coli


asm_submitter: Neckar TCE

isolate: NK

organism_name: Dehalococcoides sp.


asm_submitter: Pontificia Universidad Catolica de Chile

organism_name: Bifidobacterium longum


asm_submitter: JiLin Agricultural Science and Technology University

organism_name: Klebsiella pneumoniae


organism_name: Klebsiella michiganensis


infraspecific_name: strain=NNEfa 2992

organism_name: Enterococcus faecalis


asm_submitter: IBPM RAS

organism_name: Nocardioides sp. Bht2


asm_submitter: CEITEC VETUNI


infraspecific_name: strain=DR 99-CEF


infraspecific_name: strain=NNEfa 3001


infraspecific_name: strain=DR 98-CEF


infraspecific_name: strain=DR 88-CIP


infraspecific_name: strain=DR 89-CIP


infraspecific_name: strain=DR 89-CEF


infraspecific_name: strain=DR 87-CEF


infraspecific_name: strain=DR 85-CIP


asm_submitter: Agrosavia

organism_name: Gluconacetobacter sacchari


asm_submitter: University of Vienna

organism_name: Bacteroides uniformis


organism_name: Bacteroides fragilis


asm_submitter: Wageningen Bioveterinary Research


organism_name: Phocaeicola vulgatus


organism_name: Bacteroides thetaiotaomicron


organism_name: Bacteroides xylanisolvens


organism_name: Bacteroides hominis


organism_name: Parabacteroides distasonis


organism_name: Phocaeicola dorei


organism_name: Bacteroides ovatus


organism_name: Parabacteroides merdae


organism_name: Bacteroides faecis


organism_name: Bacteroides sp. 90-K9/2


organism_name: Bacteroides nordii


infraspecific_name: strain=DR 79-CIP

organism_name: Escherichia coli


infraspecific_name: strain=DR 55-CIP

organism_name: Klebsiella pneumoniae


infraspecific_name: strain=DR 335a-CEF


infraspecific_name: strain=DR 57-CIP


infraspecific_name: strain=DR 63-CEF

organism_name: Citrobacter braakii


infraspecific_name: strain=DR 54-CIP


infraspecific_name: strain=DR 319b-CEF


infraspecific_name: strain=DR 334-CEF


infraspecific_name: strain=DR 333a-CIP


infraspecific_name: strain=DR 319a-CEF


infraspecific_name: strain=DR 330-CIP


infraspecific_name: strain=DR 318b2-CEF


infraspecific_name: strain=DR 302-CIP


infraspecific_name: strain=DR 318b-CIP


infraspecific_name: strain=DR 318b1-CEF


infraspecific_name: strain=DR 318a-CEF


infraspecific_name: strain=DR 302-CEF


infraspecific_name: strain=DR 300a-CIP


infraspecific_name: strain=DR 297-CEF


infraspecific_name: strain=DR 295a-CIP


infraspecific_name: strain=DR 299-CIP


infraspecific_name: strain=DR 293-CEF


infraspecific_name: strain=DR 286b1-CIP


infraspecific_name: strain=DR 264-CIP


infraspecific_name: strain=DR 282c-CIP


infraspecific_name: strain=DR 260a-CEF


infraspecific_name: strain=DR 254b-CIP


infraspecific_name: strain=DR 259B-CEF


infraspecific_name: strain=DR 242b-CIP


infraspecific_name: strain=DR 25-CIP


infraspecific_name: strain=DR 238-CIP


infraspecific_name: strain=DR 24-CIP


infraspecific_name: strain=DR 233a-CEF


infraspecific_name: strain=DR 213-CEF


infraspecific_name: strain=DR 2324-CIP


infraspecific_name: strain=DR 2326-CIP


infraspecific_name: strain=DR 22-CIP


infraspecific_name: strain=DR 212-CIP


infraspecific_name: strain=DR 197-CEF


infraspecific_name: strain=DR 198a-CIP


infraspecific_name: strain=DR 197a-CIP


infraspecific_name: strain=DR 203-CIP


infraspecific_name: strain=DR 207-CIP


infraspecific_name: strain=DR 196-CEF


infraspecific_name: strain=DR 189-CEF


infraspecific_name: strain=DR 178-CEF


infraspecific_name: strain=DR 180A-CEF


infraspecific_name: strain=DR 183-CEF


infraspecific_name: strain=DR 188-CEF


infraspecific_name: strain=DR 177-CIP


infraspecific_name: strain=DR 176-CIP


infraspecific_name: strain=DR 177-CEF


infraspecific_name: strain=DR 17-CIP


infraspecific_name: strain=DR 140-CEF


infraspecific_name: strain=DR 138-CEF


infraspecific_name: strain=DR 127-CIP


infraspecific_name: strain=DR 135-CEF


infraspecific_name: strain=DR 114-CIP


infraspecific_name: strain=DR 122-CIP


infraspecific_name: strain=DR 120-CEF

organism_name: Escherichia fergusonii


infraspecific_name: strain=DR 113-CIP


infraspecific_name: strain=DR 111-CIP


infraspecific_name: strain=DR 110-CIP


infraspecific_name: strain=DR 109-CEF


infraspecific_name: strain=DR 108-CIP


infraspecific_name: strain=DR 104-CEF


infraspecific_name: strain=DR 100-CEF

organism_name: Citrobacter freundii


infraspecific_name: strain=DR 107-CIP


infraspecific_name: strain=DR 106-CEF


infraspecific_name: strain=DR 10-CEF


organism_name: Proteus vulgaris


organism_name: Proteus mirabilis


asm_submitter: Navamindradhiraj University

organism_name: Enterococcus faecium


asm_submitter: Hangzhou CDC

organism_name: Shewanella sp. BJSY2023SW007


asm_submitter: Fudan University Huashan Hospital Institute of Antibiotics

organism_name: Citrobacter youngae


organism_name: Shewanella sp. BJSY2023SW005


organism_name: Shewanella sp. BJSY2023SW004


organism_name: Shewanella sp. BJSY2023SW006


organism_name: Shewanella sp. BJSY2023SW003


organism_name: Shewanella sp. BJSY2023SW002


organism_name: Shewanella sp. BJSY2023SW001


asm_submitter: Chengdu University of Traditional Chinese Medicine

organism_name: Bacillus velezensis


organism_name: Klebsiella ornithinolytica


asm_submitter: University of the Punjab

infraspecific_name: strain=PWA

organism_name: Bacillus subtilis


organism_name: Klebsiella pneumoniae


infraspecific_name: strain=PWF


infraspecific_name: strain=PWG

organism_name: Bacillus australimaris


asm_submitter: Inha University

infraspecific_name: strain=MMBL 11-3

organism_name: Streptomyces sp. MMBL 11-3


asm_submitter: Sungkyunkwan University

organism_name: Silicimonas lutimaris


organism_name: Priestia flexa


asm_submitter: City University of Hong Kong (CityU)

organism_name: Vibrio vulnificus


asm_submitter: CFE, University of Coimbra

organism_name: Klebsiella quasipneumoniae


organism_name: Enterobacter kobei


organism_name: Citrobacter freundii


asm_submitter: Public Health England

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


asm_submitter: Centers for Disease Control and Prevention


asm_submitter: FDA Center for Food Safety and Applied Nutrition

organism_name: Cronobacter malonaticus


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Enterobacter cloacae


asm_submitter: Instituto Politecnico Nacional

organism_name: Bdellovibrio sp. HCB-110


asm_submitter: UGM

organism_name: Klebsiella quasipneumoniae subsp. similipneumoniae


asm_submitter: Chung-Ang university

organism_name: Psychromonas sp. KJ10-10


organism_name: Psychromonas sp. KJ10-2


asm_submitter: Zhejianglab

organism_name: Bordetella pertussis


asm_submitter: Yuncheng University

organism_name: Pseudidiomarina salilacus


asm_submitter: Georgia Institute of Technology

organism_name: Microbulbifer sp. CNSA002


asm_submitter: BioISI

organism_name: Brucella ceti


asm_submitter: Penn State University College of Medicine

organism_name: Sodalis sp. RH25


organism_name: Sodalis sp. RH24


organism_name: Sodalis sp. RH23


organism_name: Sodalis sp. RH22


organism_name: Sodalis sp. RH21


asm_submitter: FDA


organism_name: Sodalis sp. RH20


organism_name: Sodalis sp. RH19


organism_name: Sodalis sp. RH18


organism_name: Sodalis sp. RH17


organism_name: Sodalis sp. RH16


organism_name: Sodalis sp. RH15


organism_name: Sodalis sp. RH14


asm_submitter: Instituto de Agroquimica y Tecnologia de Alimentos (CSIC)

organism_name: Fructilactobacillus vespulae


organism_name: Sodalis sp. RH13


asm_submitter: North Carolina State University

organism_name: Mucilaginibacter sp. Mucisp86


organism_name: Sphingomonas sp. Sphisp66


organism_name: Curtobacterium sp. Curtsp57


organism_name: Acinetobacter baumannii


organism_name: Proteus mirabilis


organism_name: Klebsiella pneumoniae


organism_name: Klebsiella aerogenes


organism_name: Pseudomonas aeruginosa


organism_name: Luteibacter sp. Lutesp34


organism_name: Pseudomonas sp. Pseusp16


organism_name: Kosakonia cowanii


organism_name: Paraburkholderia phenoliruptrix


organism_name: Variovorax sp. Varisp41


organism_name: Herbaspirillum frisingense


organism_name: Massilia cellulosiltytica


organism_name: Rhizobium sp. Rhizsp82


organism_name: Pantoea dispersa


organism_name: Ralstonia sp. Ralssp110


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: National Center for Biotechnology Information

organism_name: Yersinia enterocolitica


organism_name: Neisseria gonorrhoeae


organism_name: Streptococcus pyogenes


organism_name: Acinetobacter baumannii


organism_name: Enterobacter bugandensis


asm_submitter: Centers for Disease Control and Prevention.  Division of Healthcare Quality Promotion

organism_name: Enterobacter hormaechei


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


organism_name: Campylobacter upsaliensis


organism_name: Campylobacter jejuni subsp. jejuni


isolate: Neisseria lactamica isolated from a 45 year old hijra

organism_name: Neisseria lactamica


asm_submitter: Public Health England


asm_submitter: CDC

organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Streptococcus pneumoniae


asm_submitter: FDA/CFSAN


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


asm_submitter: USDA FSIS


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Muenster


organism_name: Salmonella enterica subsp. enterica serovar London


organism_name: Klebsiella pneumoniae


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


asm_submitter: Henan Agricultural University


annotation_name: Annotation submitted by Federal University of Uberlandia

annotation_provider: Federal University of Uberlandia

asm_name: Kosakonia cowanii strain I87

asm_submitter: Federal University of Uberlandia

infraspecific_name: strain=UFU I87

organism_name: Kosakonia cowanii


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

organism_name: Neisseria gonorrhoeae


organism_name: Salmonella enterica subsp. enterica serovar Kiambu


organism_name: Serratia marcescens