organism_name: Bacteroides uniformis


asm_submitter: Federal Research and Clinical Centre of Physical-Chemical Medicine

assembly_level: Contig

assembly_type: haploid

excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

genome_rep: Full

group: bacteria

organism_name: Sutterella wadsworthensis

release_type: Major

version_status: latest


excluded_from_refseq: derived from metagenome

organism_name: Alistipes putredinis

paired_asm_comp: identical


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Alistipes shahii


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Bacteroides sp.


organism_name: Barnesiella intestinihominis


organism_name: Alistipes onderdonkii


organism_name: Akkermansia muciniphila


organism_name: Parabacteroides sp.


organism_name: Alistipes ihumii


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Lachnospiraceae bacterium


organism_name: Bacteroides cellulosilyticus


organism_name: Alistipes sp.


excluded_from_refseq: derived from metagenome; fragmented assembly


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome


organism_name: Oscillospiraceae bacterium


organism_name: Parabacteroides merdae


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; genome length too small


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Alphaproteobacteria bacterium


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome


organism_name: Agathobacter rectalis


organism_name: Segatella copri


organism_name: Christensenellales bacterium


organism_name: Acutalibacteraceae bacterium


organism_name: Phocaeicola vulgatus


organism_name: Parabacteroides distasonis


organism_name: Faecalibacterium sp.


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: naresuan university

assembly_level: Complete Genome

organism_name: Xanthomonas oryzae pv. oryzae


asm_submitter: Vircell S.L.

organism_name: Campylobacter jejuni


infraspecific_name: strain=VTEC+

organism_name: Escherichia coli


infraspecific_name: strain=subspecie aureus F-182

organism_name: Staphylococcus aureus


infraspecific_name: strain=CDC F5101

organism_name: Bordetella holmesii ATCC 51541

relation_to_type_material: assembly from type material


infraspecific_name: strain=CDC 1000527

organism_name: Klebsiella pneumoniae


asm_submitter: Northwest A&F University

organism_name: Bacillus velezensis


asm_submitter: Institute of Plant Protection

organism_name: Chryseobacterium sp. PTM-20240506


asm_submitter: Fujian Agriculture and Forestry University

assembly_level: Chromosome


asm_submitter: Northeast Normal University

organism_name: Citrobacter braakii


asm_submitter: University of Zurich

organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences

organism_name: Pantoea vagans


asm_submitter: Chung-Ang university

organism_name: Colwellia sp. RE-S-Sl-9


organism_name: Escherichia marmotae


organism_name: Alistipes putredinis


organism_name: Bacteroides uniformis


organism_name: Phocaeicola sp.


organism_name: Lachnospiraceae bacterium


organism_name: Alistipes finegoldii


organism_name: Oscillospiraceae bacterium


organism_name: Ruthenibacterium lactatiformans


organism_name: Phascolarctobacterium faecium


organism_name: Candidatus Fimisoma sp.


organism_name: Anaeromassilibacillus sp.


organism_name: Akkermansia sp.


organism_name: Alistipes onderdonkii


organism_name: Candidatus Scatocola faecipullorum


organism_name: Parabacteroides distasonis


organism_name: Bacteroides sp.


organism_name: Alistipes sp.


organism_name: Akkermansia muciniphila


organism_name: Alistipes putredinis


organism_name: Segatella copri


organism_name: Bacteroides uniformis


organism_name: Agathobacter rectalis


organism_name: Acidaminococcus intestini


organism_name: Phocaeicola sp.


organism_name: Phocaeicola vulgatus


organism_name: Escherichia coli


organism_name: Bacteroides ovatus


organism_name: Phascolarctobacterium faecium


organism_name: Ruthenibacterium lactatiformans


organism_name: Collinsella sp.


organism_name: Oscillospiraceae bacterium


organism_name: Akkermansia sp.


organism_name: Mediterraneibacter torques


organism_name: Alistipes onderdonkii


asm_submitter: Shanghai Jiao Tong University

infraspecific_name: strain=MA

organism_name: Marinobacter sp. MA


organism_name: Hominenteromicrobium sp.


asm_submitter: USDA ARS

organism_name: Agrobacterium sp. El2ro-1b


asm_submitter: Chulalongkorn University

infraspecific_name: strain=PACL

organism_name: Pseudomonas aeruginosa


organism_name: Acutalibacteraceae bacterium


organism_name: Segatella copri


organism_name: Candidatus Scatosoma sp.


organism_name: Alistipes putredinis


organism_name: Phocaeicola vulgatus


organism_name: Alistipes sp.


organism_name: Parabacteroides distasonis


organism_name: Escherichia coli


organism_name: Bacteroides sp.


organism_name: Lachnospira eligens


organism_name: Oscillospiraceae bacterium


organism_name: Akkermansia sp.


organism_name: Eisenbergiella tayi


organism_name: Ruminococcus sp.


organism_name: Bacteroides uniformis


organism_name: Segatella hominis


organism_name: Candidatus Cryptobacteroides sp.


organism_name: Alistipes onderdonkii


organism_name: Bilophila wadsworthia


organism_name: Lachnospiraceae bacterium


organism_name: Alistipes putredinis


organism_name: Porphyromonas sp.


organism_name: Barnesiella intestinihominis


organism_name: Segatella copri


organism_name: Burkholderiales bacterium


organism_name: Escherichia coli


organism_name: Phocaeicola dorei


organism_name: Oscillospiraceae bacterium


organism_name: Alistipes shahii


organism_name: Desulfovibrio fairfieldensis


organism_name: Alistipes indistinctus


organism_name: Akkermansia sp.


organism_name: Bacteroides uniformis


organism_name: Sutterella wadsworthensis


organism_name: Segatella sp.


organism_name: Akkermansia muciniphila


organism_name: Alistipes sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Alistipes putredinis


organism_name: Parabacteroides distasonis


organism_name: Phascolarctobacterium faecium


organism_name: Collinsella intestinalis


organism_name: Bilophila wadsworthia


organism_name: Barnesiella intestinihominis


organism_name: Burkholderiales bacterium


organism_name: Candidatus Acutalibacter stercoravium


organism_name: Phocaeicola vulgatus


organism_name: Alistipes onderdonkii


organism_name: Parabacteroides merdae


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; genome length too small


organism_name: Escherichia coli


annotation_name: Annotation submitted by Georg-August-University Goettingen

annotation_provider: Georg-August-University Goettingen

asm_name: BSCH

asm_submitter: Georg-August-University Goettingen

excluded_from_refseq: genome length too large; not used as type

infraspecific_name: strain=DSM 10518

organism_name: Blautia schinkii


asm_submitter: DOE Joint Genome Institute

infraspecific_name: strain=DSM 3134

organism_name: Thermithiobacillus tepidarius DSM 3134

refseq_category: reference genome


asm_submitter: Ewha Womans University

organism_name: Vibrio scophthalmi


organism_name: Gemmiger qucibialis


organism_name: Peptococcaceae bacterium


organism_name: Collinsella bouchesdurhonensis


organism_name: Akkermansia muciniphila


organism_name: Hominenteromicrobium sp.


organism_name: Slackia isoflavoniconvertens


organism_name: Blautia wexlerae


organism_name: Eubacteriales bacterium


organism_name: Acutalibacteraceae bacterium


organism_name: Eggerthella sp.


organism_name: Alistipes inops


organism_name: Eggerthellaceae bacterium


organism_name: Ellagibacter isourolithinifaciens


organism_name: Alistipes putredinis


organism_name: Lacticaseibacillus paracasei


organism_name: Bifidobacterium longum


organism_name: Oscillospiraceae bacterium


organism_name: Candidatus Fimenecus sp.


organism_name: Ruthenibacterium lactatiformans


asm_name: BLUT

infraspecific_name: strain=DSM 14534

organism_name: Blautia luti DSM 14534 = JCM 17040


asm_name: BWEX

infraspecific_name: strain=DSM 19850

organism_name: Blautia wexlerae DSM 19850


asm_submitter: University of the Pacific

organism_name: Variovorax sp. NFACC29


asm_submitter: Federal Research and Clinical Centre of Physical-Chemical Medicine

organism_name: Bifidobacterium adolescentis


organism_name: Variovorax sp. NFACC28


organism_name: Variovorax sp. NFACC27


organism_name: Variovorax sp. NFACC26


organism_name: Bacteroides uniformis


organism_name: Phocaeicola dorei


organism_name: Segatella copri


organism_name: Sutterella wadsworthensis


organism_name: Parabacteroides distasonis


organism_name: Dialisteraceae bacterium


organism_name: Burkholderiales bacterium


organism_name: Alistipes putredinis


organism_name: Bilophila wadsworthia


organism_name: Alistipes onderdonkii


organism_name: Oscillospiraceae bacterium


organism_name: Collinsella sp.


organism_name: Bacteroides sp.


organism_name: Dysosmobacter sp.


organism_name: Phocaeicola vulgatus


organism_name: Alistipes communis


organism_name: Segatella sp.


organism_name: Alistipes shahii


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Barnesiella sp.


organism_name: Variovorax sp. KK3


organism_name: Faecalibacterium prausnitzii


organism_name: Variovorax sp. 375MFSha3.1


organism_name: Variovorax sp. 350MFTsu5.1


organism_name: Gemmiger formicilis


organism_name: Alistipes putredinis


organism_name: Burkholderiales bacterium


organism_name: Christensenellales bacterium


organism_name: Alistipes onderdonkii


organism_name: Oscillospiraceae bacterium


organism_name: Acutalibacteraceae bacterium


organism_name: Akkermansia muciniphila


organism_name: Odoribacter splanchnicus


organism_name: Phascolarctobacterium faecium


organism_name: Akkermansia sp.


organism_name: Escherichia coli


organism_name: Phocaeicola sp.


organism_name: Flavonifractor plautii


organism_name: Bilophila wadsworthia


organism_name: Bacteroides stercoris


organism_name: Parabacteroides distasonis


organism_name: Ruthenibacterium lactatiformans


organism_name: Sutterella sp.


organism_name: Bacteroides ovatus


organism_name: Alistipes shahii


organism_name: Alistipes putredinis


organism_name: Segatella sp.


organism_name: Oscillospiraceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Barnesiella intestinihominis


organism_name: Candidatus Scatocola faecipullorum


organism_name: Bacteroidales bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Segatella copri


organism_name: Candidatus Cryptobacteroides sp.


organism_name: Candidatus Scatosoma sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small; genus undefined

organism_name: [Eubacterium] siraeum


organism_name: Segatella hominis


organism_name: Duodenibacillus sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Faecalibacterium sp.


organism_name: Ruminococcus sp.


organism_name: Alistipes putredinis


organism_name: Segatella sp.


organism_name: Bacteroides uniformis


organism_name: Alistipes indistinctus


organism_name: Christensenellales bacterium


organism_name: Alistipes onderdonkii


organism_name: Barnesiella intestinihominis


organism_name: Bacteroides stercoris


organism_name: Porphyromonas sp.


organism_name: Escherichia coli


organism_name: Flavonifractor plautii


organism_name: Bilophila wadsworthia


organism_name: Burkholderiales bacterium


organism_name: Phocaeicola massiliensis


organism_name: Dysosmobacter sp.


organism_name: Oscillospiraceae bacterium


organism_name: Phocaeicola sp.


organism_name: Victivallis lenta


organism_name: Barnesiella sp.


organism_name: Desulfovibrio fairfieldensis


organism_name: Collinsella intestinalis


organism_name: Alistipes putredinis


organism_name: Alistipes onderdonkii


organism_name: Acutalibacteraceae bacterium


organism_name: Akkermansia sp.


organism_name: Variovorax sp. 278MFTsu5.1


organism_name: Porphyromonas sp.


organism_name: Variovorax sp. 160MFSha2.1


organism_name: Segatella hominis


infraspecific_name: strain=NBRC 15149

organism_name: Variovorax paradoxus NBRC 15149


organism_name: Phocaeicola vulgatus


organism_name: Burkholderiales bacterium


organism_name: Alistipes shahii


organism_name: Barnesiella intestinihominis


organism_name: Oscillospiraceae bacterium


organism_name: Dysosmobacter sp.


organism_name: Lachnospiraceae bacterium


organism_name: Bilophila wadsworthia


organism_name: Desulfovibrio fairfieldensis


organism_name: Gemmiger formicilis


organism_name: Megasphaera geminata


organism_name: Coprobacter fastidiosus


organism_name: Bacteroides uniformis


organism_name: Phascolarctobacterium succinatutens


organism_name: Escherichia coli


organism_name: Alloprevotella sp.


organism_name: Candidatus Ventricola sp.


organism_name: Bacteroidales bacterium


organism_name: Megasphaera micronuciformis


organism_name: Lactobacillus paragasseri


organism_name: Anaerostipes hadrus


organism_name: Alistipes putredinis


organism_name: Collinsella sp.


organism_name: Bifidobacterium dentium


organism_name: Sutterella wadsworthensis


organism_name: Barnesiella intestinihominis


organism_name: Butyricimonas virosa


organism_name: Bacteroides fragilis


organism_name: Segatella copri


organism_name: Oscillospiraceae bacterium


organism_name: Megamonas funiformis


organism_name: Christensenellales bacterium


organism_name: Bifidobacterium longum


organism_name: Akkermansia muciniphila


organism_name: Dialister hominis


organism_name: Blautia wexlerae


organism_name: Mediterraneibacter gnavus


organism_name: Parasutterella excrementihominis


organism_name: Ruthenibacterium lactatiformans


organism_name: Alistipes shahii


organism_name: Alistipes putredinis


organism_name: Faecalibacterium prausnitzii


organism_name: Bacteroides salyersiae


organism_name: Phocaeicola vulgatus


organism_name: Parabacteroides merdae


organism_name: Coprococcus sp.


organism_name: Bacteroides ovatus


organism_name: Butyricimonas faecihominis


organism_name: Dysosmobacter welbionis


organism_name: Flavonifractor plautii


organism_name: Odoribacter splanchnicus


organism_name: Sutterella wadsworthensis


organism_name: Bacilli bacterium


organism_name: Phocaeicola coprophilus


organism_name: Dialister hominis


organism_name: Ruminococcus sp.


organism_name: Christensenellales bacterium


organism_name: [Lactobacillus] rogosae


organism_name: Alistipes onderdonkii


organism_name: Anaerotignum faecicola


organism_name: Segatella sp.


organism_name: Oscillospiraceae bacterium


organism_name: Faecalibacterium sp.


organism_name: Butyribacter sp.


organism_name: Waltera sp.


organism_name: Barnesiella intestinihominis


organism_name: Acutalibacteraceae bacterium


organism_name: Limosilactobacillus oris


organism_name: Coprococcus eutactus


organism_name: Veillonella atypica


organism_name: Alistipes putredinis


organism_name: Parabacteroides merdae


organism_name: Agathobacter rectalis


organism_name: Dysosmobacter sp.


organism_name: Phocaeicola vulgatus


organism_name: Faecousia sp.


organism_name: Ruminococcus sp.


organism_name: Bacteroides uniformis


organism_name: Alistipes onderdonkii


organism_name: Segatella sp.


organism_name: Lachnospiraceae bacterium


organism_name: Dialister sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Oscillospiraceae bacterium


organism_name: Candidatus Fimenecus sp.


organism_name: Intestinimonas sp.


organism_name: Bacteroides ovatus


organism_name: Alistipes inops


organism_name: Bacteroides thetaiotaomicron


organism_name: Fusicatenibacter saccharivorans


organism_name: Bifidobacterium longum


organism_name: Phocaeicola sp.


organism_name: Parabacteroides distasonis


organism_name: Roseburia faecis


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Dialister invisus


organism_name: Bacteroides cellulosilyticus


organism_name: Dysosmobacter welbionis


organism_name: Bacteroides uniformis


organism_name: Butyricimonas virosa


organism_name: Alistipes onderdonkii


organism_name: Alistipes putredinis


organism_name: Variovorax paradoxus


organism_name: Phocaeicola vulgatus


organism_name: Mesosutterella multiformis


organism_name: Agathobacter rectalis


organism_name: Fusicatenibacter saccharivorans


organism_name: Ruminococcus sp.


organism_name: Oscillospiraceae bacterium


organism_name: Gemmiger qucibialis


organism_name: Candidatus Fimenecus sp.


organism_name: Lactobacillus delbrueckii


organism_name: Limosilactobacillus fermentum


organism_name: Limosilactobacillus vaginalis


organism_name: Anaerostipes hadrus


organism_name: Lactobacillus amylovorus


organism_name: Roseburia faecis


organism_name: Bacteroides uniformis


organism_name: Parabacteroides distasonis


organism_name: Bacilli bacterium


organism_name: Parabacteroides merdae


organism_name: Bacteroides intestinalis


organism_name: Coprococcus sp.


organism_name: Lachnospiraceae bacterium


organism_name: Leyella stercorea


organism_name: Ruminococcus sp.


organism_name: Sutterella wadsworthensis


organism_name: Candidatus Cryptobacteroides sp.


organism_name: Blautia obeum


organism_name: Alistipes shahii


organism_name: Streptococcus sp.


organism_name: [Eubacterium] siraeum


organism_name: Eubacterium sp.


organism_name: Bacteroides xylanisolvens


organism_name: Butyribacter sp.


organism_name: Dysosmobacter sp.


organism_name: Oscillospiraceae bacterium


organism_name: Anaerotignum faecicola


organism_name: Clostridia bacterium


organism_name: Alistipes inops


organism_name: Clostridium fessum


organism_name: Fusicatenibacter saccharivorans


organism_name: Lachnospira eligens


organism_name: Ligilactobacillus salivarius


organism_name: Odoribacter splanchnicus


organism_name: Agathobacter rectalis


organism_name: Pilosibacter sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Collinsella sp.


organism_name: Phocaeicola vulgatus


organism_name: Akkermansia sp.


organism_name: Limosilactobacillus mucosae


organism_name: Roseburia faecis


organism_name: Faecalibacterium prausnitzii


organism_name: Christensenellales bacterium


organism_name: Bifidobacterium longum


organism_name: Parabacteroides distasonis


organism_name: Parasutterella sp.


organism_name: Bifidobacterium bifidum


organism_name: Alistipes putredinis


organism_name: Bacteroides thetaiotaomicron


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Megasphaera sp.


organism_name: Lachnospira eligens


organism_name: Bacteroides stercoris


organism_name: Candidatus Fimenecus sp.


organism_name: Bacteroides uniformis


organism_name: Ruminococcus sp.


organism_name: Ligilactobacillus salivarius


organism_name: Clostridium fessum


organism_name: Butyricimonas virosa


organism_name: Butyribacter sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Alistipes onderdonkii


organism_name: Agathobacter rectalis


organism_name: Clostridia bacterium


organism_name: Bacteroides fragilis


organism_name: Escherichia coli


organism_name: Bacteroides sp.


organism_name: Veillonella parvula


organism_name: Mitsuokella multacida


organism_name: Enterocloster sp.


organism_name: Collinsella sp.


organism_name: Oscillospiraceae bacterium


organism_name: Segatella copri


organism_name: Ruminococcus sp.


organism_name: Alistipes shahii


organism_name: Barnesiella intestinihominis


organism_name: Alistipes putredinis


organism_name: Akkermansia muciniphila


organism_name: Christensenellales bacterium


organism_name: Bacteroides uniformis


organism_name: Bilophila wadsworthia


organism_name: Phascolarctobacterium faecium


organism_name: Escherichia coli


organism_name: Burkholderiales bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Muribaculaceae bacterium


organism_name: Pseudomonas citronellolis


organism_name: Akkermansia sp.


organism_name: Odoribacter laneus


organism_name: [Eubacterium] siraeum


organism_name: Alistipes finegoldii


organism_name: Parabacteroides distasonis


organism_name: Eubacterium sp.


organism_name: Alistipes onderdonkii


organism_name: Ruminococcus sp.


organism_name: Agathobacter rectalis


organism_name: Akkermansia muciniphila


organism_name: Acutalibacteraceae bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Alistipes putredinis


organism_name: Segatella sp.


organism_name: Alistipes indistinctus


organism_name: Christensenellales bacterium


organism_name: Sutterella wadsworthensis


organism_name: Variovorax atrisoli 110B


organism_name: Variovorax paradoxus


organism_name: Phocaeicola vulgatus


organism_name: Bacteroides uniformis


organism_name: Faecalibacterium prausnitzii


asm_submitter: OPTIMISTICC

excluded_from_refseq: many frameshifted proteins

organism_name: Fusobacterium animalis


organism_name: Barnesiella intestinihominis


organism_name: Escherichia coli


organism_name: Segatella copri


organism_name: Gemmiger qucibialis


organism_name: Candidatus Fimenecus sp.


organism_name: Oscillospiraceae bacterium


organism_name: Alistipes putredinis


organism_name: Acutalibacteraceae bacterium


organism_name: Escherichia marmotae


organism_name: Segatella sp.


organism_name: Lachnospiraceae bacterium


organism_name: Alistipes finegoldii


organism_name: Dialister invisus


organism_name: Alistipes ihumii


organism_name: Bacteroides uniformis


organism_name: Faecalibacterium sp.


organism_name: Prevotella sp.


organism_name: Alistipes shahii


organism_name: Barnesiella intestinihominis


organism_name: Agathobacter rectalis


organism_name: Acidaminococcus intestini


organism_name: Dysosmobacter sp.


organism_name: Alistipes onderdonkii


organism_name: Akkermansia muciniphila


organism_name: Oscillospiraceae bacterium


organism_name: Phocaeicola vulgatus


organism_name: Bacteroides xylanisolvens


organism_name: Christensenellales bacterium


organism_name: Acutalibacteraceae bacterium


organism_name: Alistipes putredinis


organism_name: Escherichia coli


organism_name: Alistipes senegalensis


organism_name: Parasutterella excrementihominis


organism_name: Dysosmobacter welbionis


organism_name: Citrobacter portucalensis


organism_name: Bacteroides ovatus


organism_name: Ruminococcus sp.


organism_name: Candidatus Fimenecus sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Desulfovibrio sp.


organism_name: Candidatus Scatavimonas sp.


organism_name: Akkermansia muciniphila


organism_name: Alistipes sp.


organism_name: Alistipes shahii


organism_name: Barnesiella intestinihominis


organism_name: Phocaeicola dorei


organism_name: Alistipes putredinis


organism_name: Acutalibacteraceae bacterium


organism_name: Segatella copri


organism_name: Oscillospiraceae bacterium


organism_name: Parabacteroides distasonis


organism_name: Bacteroides stercoris


organism_name: Bacteroides ovatus


organism_name: Fusobacterium nucleatum


organism_name: Fusobacterium animalis


organism_name: Fusobacterium polymorphum


organism_name: Bacteroides sp.


organism_name: Alistipes onderdonkii


organism_name: Faecalibacterium sp.


organism_name: Bacteroides caccae


organism_name: Bacteroides uniformis


organism_name: Burkholderiales bacterium


organism_name: Phocaeicola vulgatus


organism_name: Pseudomonas aeruginosa


organism_name: Barnesiella intestinihominis


organism_name: Alistipes sp.


organism_name: Alistipes putredinis


organism_name: Bacteroides cellulosilyticus


organism_name: Akkermansia muciniphila


organism_name: Alphaproteobacteria bacterium


organism_name: Acutalibacteraceae bacterium


organism_name: Escherichia coli


organism_name: Ruminococcus sp.


organism_name: Roseburia faecis


organism_name: Bifidobacterium longum


organism_name: Oscillospiraceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Bifidobacterium adolescentis


organism_name: Segatella sp.


organism_name: Dialister hominis


organism_name: Collinsella sp.


organism_name: Faecalibacterium sp.


organism_name: Agathobacter rectalis


organism_name: Dorea longicatena


organism_name: Butyricicoccus sp.


organism_name: Streptococcus sp.


organism_name: Holdemanella porci


organism_name: Butyribacter sp.


organism_name: Limosilactobacillus vaginalis


organism_name: Dialister succinatiphilus


organism_name: Gemmiger qucibialis


organism_name: Alloprevotella sp.


organism_name: Clostridia bacterium


organism_name: Eubacterium sp.


organism_name: Prevotella sp.


organism_name: Segatella copri


organism_name: Lachnospiraceae bacterium


organism_name: Roseburia faecis


organism_name: Ruminococcus sp.


organism_name: Agathobacter rectalis


organism_name: Phocaeicola vulgatus


organism_name: Coprococcus sp.


organism_name: Oscillospiraceae bacterium


organism_name: Lachnospira eligens


organism_name: Bifidobacterium adolescentis


organism_name: Faecalibacterium prausnitzii


organism_name: Faecalibacterium sp.


organism_name: Dialister hominis


organism_name: Dorea longicatena


organism_name: Anaerostipes hadrus


organism_name: Collinsella sp.


organism_name: Blautia wexlerae


organism_name: Bifidobacterium longum


organism_name: Caecibacter sp.


organism_name: Roseburia faecis


excluded_from_refseq: contaminated; unverified source organism; derived from metagenome

organism_name: Ruminococcus sp.


organism_name: Alistipes putredinis


organism_name: Megasphaera massiliensis


organism_name: Ruminococcus callidus


organism_name: [Lactobacillus] rogosae


organism_name: Akkermansia muciniphila


organism_name: Segatella sp.


organism_name: Fusicatenibacter saccharivorans


organism_name: Agathobaculum sp.


organism_name: Lachnospiraceae bacterium


organism_name: Faecalibacterium sp.


organism_name: Ligilactobacillus ruminis


organism_name: Oscillospiraceae bacterium


organism_name: Dorea longicatena


organism_name: Acutalibacteraceae bacterium


organism_name: Collinsella sp.


organism_name: Bifidobacterium adolescentis


organism_name: Roseburia inulinivorans


organism_name: Agathobacter rectalis


organism_name: Coprococcus sp.


organism_name: Blautia sp.


organism_name: Anaerobutyricum soehngenii


organism_name: Dialister hominis


organism_name: Eubacterium sp.


organism_name: Roseburia faecis


organism_name: Butyribacter sp.


organism_name: Alloprevotella sp.


organism_name: Prevotella sp.


organism_name: Veillonella parvula


organism_name: Segatella copri


organism_name: Dorea longicatena


organism_name: Clostridia bacterium


organism_name: Butyricicoccus sp.


organism_name: Dialister succinatiphilus


organism_name: Oscillospiraceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Agathobaculum sp.


asm_submitter: University of Chinese Academy of Sciences

organism_name: Oceanimonas smirnovii


organism_name: Collinsella sp.


organism_name: Holdemanella porci


organism_name: Fusicatenibacter saccharivorans


asm_submitter: Ningxia Medical University General Hospital

organism_name: Streptococcus parasuis


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Bifidobacterium angulatum


organism_name: Prevotella sp.


organism_name: Eggerthellaceae bacterium


organism_name: Christensenellales bacterium


organism_name: Streptococcus anginosus


organism_name: Candidatus Fimenecus sp.


organism_name: Anaerostipes hadrus


organism_name: Ligilactobacillus ruminis


organism_name: Gemmiger qucibialis


organism_name: Clostridia bacterium


organism_name: Segatella sp.


organism_name: Streptococcus sp.


organism_name: Ruminococcus sp.


organism_name: Caecibacter sp.


organism_name: Veillonella parvula


organism_name: Alloprevotella sp.


organism_name: Candidatus Limivicinus sp.


organism_name: Coprococcus sp.


organism_name: Agathobacter rectalis


organism_name: Agathobaculum sp.


organism_name: Alistipes putredinis


organism_name: Eggerthella lenta


organism_name: Dialister hominis


organism_name: Faecalibacterium sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Blautia wexlerae


organism_name: Gemmiger formicilis


organism_name: Segatella copri


organism_name: Fusicatenibacter saccharivorans


organism_name: Blautia sp.


organism_name: Caecibacter sp.


organism_name: Collinsella sp.


organism_name: Bacteroides uniformis


organism_name: Lachnospiraceae bacterium


organism_name: Ruminococcus callidus


organism_name: Roseburia inulinivorans


organism_name: Bifidobacterium longum


organism_name: Dorea longicatena


organism_name: Gemmiger qucibialis


organism_name: Eggerthella lenta


organism_name: Agathobacter rectalis


organism_name: Escherichia coli


organism_name: Veillonella parvula


organism_name: Ligilactobacillus ruminis


organism_name: Dialister hominis


organism_name: Mediterraneibacter torques


organism_name: Acutalibacteraceae bacterium


organism_name: Megamonas funiformis


organism_name: Alistipes putredinis


organism_name: Bifidobacterium dentium


organism_name: Barnesiella intestinihominis


organism_name: Phocaeicola sp.


organism_name: Mediterraneibacter gnavus


organism_name: Akkermansia muciniphila


organism_name: Segatella sp.


organism_name: Oscillospiraceae bacterium


organism_name: Alistipes onderdonkii


organism_name: Segatella copri


organism_name: Phocaeicola dorei


organism_name: Faecalibacterium sp.


organism_name: Escherichia coli


organism_name: Phocaeicola vulgatus


organism_name: Alistipes indistinctus


organism_name: Lachnospiraceae bacterium


organism_name: Alistipes shahii


organism_name: Alistipes putredinis


organism_name: Christensenellales bacterium


organism_name: Bacteroides xylanisolvens


organism_name: Dialister invisus


organism_name: Bacteroides uniformis


organism_name: Odoribacter laneus


organism_name: Bacteroides sp.


organism_name: Oscillospiraceae bacterium


organism_name: Acidaminococcus intestini


organism_name: Klebsiella aerogenes


organism_name: Mediterraneibacter gnavus


organism_name: Eshraghiella crossota


organism_name: Bifidobacterium longum


organism_name: Fusicatenibacter saccharivorans


organism_name: Anaerostipes hadrus


organism_name: Blautia wexlerae


organism_name: Proteus mirabilis


organism_name: Eggerthellaceae bacterium


organism_name: Clostridium fessum


organism_name: Mediterraneibacter faecis


organism_name: [Lactobacillus] rogosae


organism_name: Enterobacter hormaechei


organism_name: Agathobaculum sp.


organism_name: Intestinibacter bartlettii


organism_name: Collinsella bouchesdurhonensis


organism_name: Collinsella sp.


organism_name: Roseburia inulinivorans


organism_name: Desulfovibrio sp.


organism_name: Akkermansia sp.


organism_name: Negativibacillus sp.


organism_name: Holdemanella porci


organism_name: Enterococcus lactis


organism_name: Gemmiger formicilis


organism_name: Ruminococcus sp.


organism_name: Lachnospiraceae bacterium


organism_name: Dialister sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Hominenteromicrobium sp.


organism_name: Gemmiger qucibialis


organism_name: Bifidobacterium bifidum


organism_name: Catenibacterium sp.


organism_name: Psychromonas sp. GE-S-Ul-11


organism_name: Enterocloster sp.


organism_name: Anaerostipes hadrus


organism_name: Marinomonas sp. RS-M-Aa-14


organism_name: Agathobacter rectalis


organism_name: Pseudoalteromonas sp. RW-H-Ap-1


organism_name: Blautia wexlerae


organism_name: Clostridia bacterium


organism_name: Mediterraneibacter faecis


organism_name: Eubacteriales bacterium


organism_name: Clostridium fessum


organism_name: Blautia caecimuris


organism_name: Blautia faecis


organism_name: Coprococcus eutactus


organism_name: Lachnospiraceae bacterium


organism_name: Agathobaculum sp.


organism_name: Blautia sp.


organism_name: Gemmiger qucibialis


organism_name: Adlercreutzia equolifaciens


organism_name: Bifidobacterium adolescentis


organism_name: Eubacterium ramulus


organism_name: Acutalibacteraceae bacterium


organism_name: Alistipes putredinis


organism_name: Phascolarctobacterium faecium


organism_name: Collinsella sp.


organism_name: Eggerthella lenta


organism_name: Enterococcus lactis


organism_name: Dorea longicatena


organism_name: Blautia wexlerae


organism_name: Roseburia hominis


organism_name: Mediterraneibacter torques


organism_name: Anaerobutyricum hallii


organism_name: Coprococcus eutactus


organism_name: Litorimonas sp. RW-G-Af-16


asm_submitter: Chang Gung Memorial Hospital

excluded_from_refseq: unverified source organism; partial

genome_rep: Partial

organism_name: Staphylococcus lugdunensis


asm_submitter: Institute of Marine

excluded_from_refseq: derived from metagenome; genus undefined; partial

organism_name: uncultured bacterium


excluded_from_refseq: derived from metagenome

organism_name: Agathobacter rectalis


organism_name: Fusicatenibacter saccharivorans


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Anaerostipes hadrus


organism_name: Ruminococcus callidus


organism_name: Blautia faecis


organism_name: Phascolarctobacterium faecium


organism_name: Megasphaera massiliensis


organism_name: Enterococcus lactis


excluded_from_refseq: derived from metagenome; genome length too large

organism_name: Anaerobutyricum soehngenii


organism_name: Roseburia faecis


organism_name: Dorea longicatena


organism_name: Blautia wexlerae


organism_name: Ligilactobacillus ruminis


organism_name: Ruminococcus bromii


organism_name: Bifidobacterium angulatum


asm_submitter: Wonkwang University

organism_name: Lysinibacillus fusiformis


asm_submitter: ocean university of china

organism_name: Bacteroides difficilis


asm_submitter: FRC Kazan Scientific Center RAS

organism_name: Sphingobacterium detergens


asm_submitter: Canadian Food Inspection Agency

organism_name: Listeria monocytogenes


organism_name: Bacteroides zhangwenhongii


asm_name: Clostridium isatidis BK32

asm_submitter: Japan International Research Center for Agricultural Sciences (JIRCAS)

organism_name: Clostridium isatidis


asm_submitter: Animal and Plant Quarantine Agency


asm_submitter: The Second Affiliated Hospital of Guangzhou Medical University

organism_name: Klebsiella pneumoniae


asm_submitter: Hubei University of Technology

organism_name: Rhodococcus pyridinivorans


asm_submitter: CreatiPhage Biotechnology Co.


asm_submitter: Longyan University

organism_name: Actinobacillus pleuropneumoniae


asm_submitter: University of Ibadan, Nigeria

excluded_from_refseq: unverified source organism; fragmented assembly; partial

organism_name: Escherichia coli


excluded_from_refseq: partial


excluded_from_refseq: fragmented assembly; partial


excluded_from_refseq: contaminated; unverified source organism; partial


asm_submitter: Chonnam national university

infraspecific_name: strain=DSM 21863

organism_name: Isoptericola jiangsuensis


organism_name: Flavobacterium faecale


infraspecific_name: strain=KCTC 22121

organism_name: Shewanella basaltis


excluded_from_refseq: unverified source organism; not used as type

organism_name: Pseudideonella sakaiensis


asm_submitter: Zhengzhou University


organism_name: Klebsiella aerogenes


organism_name: Klebsiella ornithinolytica


organism_name: Citrobacter freundii


asm_submitter: Medical Faculty, Otto-von-Guericke University Magdeburg

organism_name: Aliarcobacter lanthieri


asm_submitter: National Yang Ming Chiao Tung University


organism_name: Aliarcobacter vitoriensis


asm_submitter: Kyungpook National University

organism_name: Leuconostoc mesenteroides


organism_name: Listeria monocytogenes


excluded_from_refseq: annotation fails completeness check


asm_submitter: Federal Research and Clinical Centre of Physical-Chemical Medicine

organism_name: Agathobacter rectalis


organism_name: Dorea formicigenerans


organism_name: Blautia obeum


organism_name: Anaerostipes hadrus


organism_name: Bifidobacterium bifidum


organism_name: Blautia wexlerae


asm_submitter: National Research and Innovation Agency

excluded_from_refseq: missing rRNA genes

organism_name: Klebsiella pneumoniae


excluded_from_refseq: Automated annotation fails to meet RefSeq quality standards

infraspecific_name: strain=RKI 380DKa


infraspecific_name: strain=RKI 400DKa


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Oliverpabstia sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Coprococcus sp.


organism_name: Collinsella sp.


organism_name: Pseudoruminococcus massiliensis


organism_name: Phascolarctobacterium faecium


group: archaea

organism_name: Methanobrevibacter smithii


organism_name: Dorea longicatena


organism_name: Faecalibacterium sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Escherichia coli


organism_name: Eubacterium sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Eubacteriales bacterium


organism_name: Holdemanella porci


organism_name: Oscillospiraceae bacterium


organism_name: Streptococcus anginosus


organism_name: Christensenellales bacterium


asm_submitter: University of Copenhagen

excluded_from_refseq: genus undefined

organism_name: Nannocystaceae bacterium ST9


organism_name: Klebsiella pneumoniae


asm_submitter: Vavilov Institute of General Genetics

organism_name: Faecalibacterium taiwanense


organism_name: Faecalibacterium sp. 9


asm_submitter: USDA, ARS, WRRC

assembly_level: Scaffold

organism_name: Salmonella enterica


asm_submitter: Institute of Hydrobiology

organism_name: Thauera sp. WH-2


asm_submitter: Jilin Agricultural Science and Technology University

organism_name: Aerococcus urinaeequi


excluded_from_refseq: fragmented assembly


organism_name: Staphylococcus epidermidis


asm_submitter: Shandong University

infraspecific_name: strain=strain M5-CD2-14

organism_name: Enterococcus hirae


asm_submitter: College of Dairy Science, Kamdhenu University, Amreli


organism_name: Collinsella sp.


excluded_from_refseq: derived from metagenome

organism_name: Candidatus Limisoma sp.


organism_name: Anaerostipes hadrus


organism_name: Coprococcus eutactus


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Gemmiger formicilis


organism_name: Oscillospiraceae bacterium


organism_name: Fusicatenibacter saccharivorans


organism_name: Hominenteromicrobium sp.


organism_name: Agathobacter rectalis


organism_name: Megasphaera sp.


organism_name: Faecalibacterium sp.


organism_name: Eubacterium sp.


organism_name: Ligilactobacillus ruminis


organism_name: [Lactobacillus] rogosae


organism_name: Escherichia coli


organism_name: Segatella copri


organism_name: Lachnospiraceae bacterium


organism_name: Dialister succinatiphilus


organism_name: Phocaeicola dorei


organism_name: Flavonifractor plautii


organism_name: Parabacteroides distasonis


organism_name: Candidatus Fimenecus sp.


organism_name: Alloprevotella sp.


organism_name: Acutalibacteraceae bacterium


excluded_from_refseq: contaminated; derived from metagenome; genome length too small

organism_name: Fusicatenibacter saccharivorans


organism_name: Oscillospiraceae bacterium


organism_name: Dorea longicatena


organism_name: Coprococcus sp.


organism_name: Veillonella parvula


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Eubacterium sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Ruminococcus champanellensis


organism_name: Barnesiella intestinihominis


organism_name: Christensenellales bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Bacilli bacterium


organism_name: Dialister succinatiphilus


excluded_from_refseq: contaminated; unverified source organism; derived from metagenome

organism_name: Ruminococcus sp.


organism_name: Eubacteriales bacterium


organism_name: Blautia sp.


organism_name: Phocaeicola dorei


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome

organism_name: Mitsuokella multacida


organism_name: Bifidobacterium longum


organism_name: Methanobrevibacter smithii


organism_name: Bifidobacterium angulatum


organism_name: Coprococcus sp.


organism_name: Lachnospiraceae bacterium


organism_name: Oscillospiraceae bacterium


organism_name: [Bacteroides] pectinophilus


organism_name: Acutalibacteraceae bacterium


organism_name: Holdemanella porci


organism_name: Phocaeicola sp.


organism_name: Christensenellales bacterium


organism_name: Butyrivibrio sp.


organism_name: Ruminococcus sp.


organism_name: Ruminiclostridium sp.


organism_name: Dialister succinatiphilus


organism_name: Angelakisella sp.


organism_name: Akkermansia muciniphila


organism_name: Waltera sp.


organism_name: Methanobrevibacter smithii


organism_name: Candidatus Fimenecus sp.


organism_name: Coprococcus sp.


organism_name: [Clostridium] leptum


organism_name: Fusicatenibacter saccharivorans


organism_name: Collinsella sp.


organism_name: Lachnospiraceae bacterium


organism_name: Blautia sp.


organism_name: Gemmiger qucibialis


organism_name: Gemmiger formicilis


organism_name: Acutalibacteraceae bacterium


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Gordonibacter sp.


organism_name: Paraprevotella clara


organism_name: Caecibacter sp.


organism_name: Eggerthellaceae bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Agathobaculum sp.


organism_name: Faecalibacterium sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; genome length too small


asm_submitter: Yangzhou University

organism_name: Staphylococcus aureus


asm_submitter: Zhejiang SCI-TECH University

infraspecific_name: strain=KCTC 32163

organism_name: Salinimicrobium soli


organism_name: Haliea sp. E17


asm_submitter: Research Center of Biotechnology RAS

organism_name: Aquisalimonas sp. APHAB1-3


organism_name: Microbulbifer weihaiensis


organism_name: Faecalibacterium sp. 3


organism_name: Alkalihalobacterium sp. APHAB7


asm_submitter: Jilin University

organism_name: Yersinia enterocolitica


excluded_from_refseq: annotation fails completeness check


organism_name: Yersinia sp. LJYL362


organism_name: Hominenteromicrobium sp.


organism_name: Candidatus Fimenecus sp.


organism_name: Collinsella sp.


organism_name: Gemmiger formicilis


organism_name: Lachnospiraceae bacterium


organism_name: Lachnospira sp.


organism_name: Eubacterium sp.


organism_name: Oscillospiraceae bacterium


organism_name: Evtepia gabavorous


organism_name: Catenibacterium sp.


organism_name: Akkermansia sp.


organism_name: Lactococcus lactis


organism_name: Blautia faecis


organism_name: Holdemanella porci


organism_name: Mediterraneibacter torques


excluded_from_refseq: contaminated; derived from metagenome; genome length too large

organism_name: Anaerobutyricum soehngenii


organism_name: Fusicatenibacter saccharivorans


organism_name: Blautia sp.


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Ruminococcus sp.


organism_name: Candidatus Ventricola sp.


organism_name: Oliverpabstia sp.


organism_name: Bifidobacterium longum


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Collinsella sp.


organism_name: Latilactobacillus sakei


organism_name: Ruthenibacterium lactatiformans


organism_name: Bifidobacterium dentium


organism_name: Oscillospiraceae bacterium


organism_name: Acidaminococcus sp.


organism_name: Alistipes putredinis


organism_name: Parabacteroides distasonis


organism_name: Bifidobacterium animalis


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; genome length too small

organism_name: Ruminococcus callidus


organism_name: Barnesiella intestinihominis


organism_name: Dorea longicatena


organism_name: Blautia sp.


organism_name: Faecalibacterium sp.


organism_name: Caecibacter sp.


organism_name: Megasphaera massiliensis


organism_name: Ligilactobacillus ruminis


organism_name: Ruminococcus sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Acutalibacteraceae bacterium


organism_name: Bacteroides uniformis


organism_name: Streptococcus oralis


organism_name: Akkermansia muciniphila


organism_name: Bifidobacterium catenulatum


organism_name: Collinsella sp.


organism_name: Agathobacter rectalis


organism_name: Bifidobacterium adolescentis


organism_name: Blautia wexlerae


organism_name: Oscillospiraceae bacterium


organism_name: Bifidobacterium longum


organism_name: Hominenteromicrobium sp.


organism_name: Faecousia sp.


organism_name: Lachnospiraceae bacterium


organism_name: Gemmiger formicilis


organism_name: Faecalibacterium sp.


organism_name: Mediterraneibacter torques


organism_name: Caecibacter sp.


organism_name: Eubacteriales bacterium


organism_name: Agathobaculum sp.


organism_name: Weissella cibaria


organism_name: Streptococcus vestibularis


organism_name: Fusicatenibacter saccharivorans


organism_name: Eggerthella lenta


organism_name: Blautia faecis


organism_name: Dorea longicatena


organism_name: Oscillospiraceae bacterium


organism_name: Anaerostipes hadrus


organism_name: Alistipes putredinis


organism_name: Alloscardovia omnicolens


organism_name: Acutalibacteraceae bacterium


organism_name: Ruminococcus callidus


organism_name: Blautia wexlerae


organism_name: Bifidobacterium adolescentis


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small; genus undefined

organism_name: [Eubacterium] siraeum


organism_name: Christensenellales bacterium


organism_name: Dialister sp.


organism_name: Lachnospiraceae bacterium


organism_name: Eggerthellaceae bacterium


organism_name: Enterococcus hirae


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Escherichia coli


organism_name: Bifidobacterium longum


organism_name: Coprococcus sp.


organism_name: Agathobaculum sp.


excluded_from_refseq: derived from metagenome

organism_name: Agathobacter rectalis


organism_name: Oscillospiraceae bacterium


organism_name: Alistipes inops


organism_name: Bacteroides uniformis


organism_name: Eubacterium sp.


organism_name: Collinsella sp.


organism_name: Ruminococcus sp.


organism_name: Bifidobacterium bifidum


organism_name: Anaerostipes hadrus


organism_name: Faecalibacillus intestinalis


organism_name: Butyribacter sp.


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Mediterraneibacter torques


organism_name: Lachnospiraceae bacterium


organism_name: Fusicatenibacter saccharivorans


organism_name: Akkermansia muciniphila


organism_name: Roseburia faecis


organism_name: Phocaeicola massiliensis


organism_name: Coprococcus sp.


organism_name: Alistipes putredinis


organism_name: Dialister succinatiphilus


organism_name: Gemmiger formicilis


organism_name: Agathobacter sp.


organism_name: Agathobaculum sp.


organism_name: Gemmiger qucibialis


organism_name: Bifidobacterium longum


organism_name: Dorea longicatena


organism_name: Holdemanella porci


organism_name: Eubacterium sp.


organism_name: Clostridia bacterium


organism_name: Escherichia coli


organism_name: Roseburia inulinivorans


organism_name: Segatella copri


organism_name: Ruminococcus sp.


organism_name: Fusicatenibacter saccharivorans


organism_name: Bifidobacterium angulatum


organism_name: Agathobacter rectalis


organism_name: Blautia sp.


organism_name: Oscillospiraceae bacterium


organism_name: Prevotella sp.


organism_name: Phocaeicola dorei


organism_name: Alloprevotella sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Coprococcus sp.


organism_name: Gemmiger formicilis


organism_name: Holdemanella porci


organism_name: Gemmiger qucibialis


organism_name: Evtepia sp.


organism_name: Collinsella sp.


organism_name: Roseburia faecis


organism_name: Bifidobacterium longum


organism_name: Ruminococcus sp.


organism_name: Mediterraneibacter faecis


organism_name: Dialister succinatiphilus


organism_name: Lachnospiraceae bacterium


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Candidatus Fimenecus sp.


organism_name: Fusicatenibacter saccharivorans


organism_name: Agathobaculum sp.


organism_name: Agathobacter sp.


organism_name: Prevotella sp.


organism_name: Bifidobacterium angulatum


organism_name: Anaerostipes hadrus


organism_name: Segatella sp.


organism_name: Coprococcus sp.


organism_name: Gemmiger formicilis


organism_name: Phocaeicola vulgatus


organism_name: Alloprevotella sp.


organism_name: Holdemanella porci


organism_name: Bifidobacterium longum


organism_name: Dialister succinatiphilus


organism_name: Dorea longicatena


organism_name: Ruminococcus sp.


organism_name: Agathobacter rectalis


organism_name: Blautia sp.


organism_name: Collinsella sp.


organism_name: Ruminococcus callidus


organism_name: Anaerobutyricum hallii


organism_name: Lachnospiraceae bacterium


organism_name: Segatella copri


organism_name: Candidatus Fimenecus sp.


organism_name: Lachnospira sp.


organism_name: Roseburia intestinalis


organism_name: Prevotella sp.


organism_name: Roseburia faecis


organism_name: Gemmiger formicilis


organism_name: Bifidobacterium longum


organism_name: Streptococcus salivarius


organism_name: Mediterraneibacter faecis


organism_name: Fusicatenibacter saccharivorans


organism_name: Coprococcus eutactus


organism_name: Ruminococcus sp.


organism_name: Anaerostipes hadrus


organism_name: Oscillospiraceae bacterium


organism_name: Akkermansia sp.


organism_name: Dialister sp.


organism_name: Collinsella aerofaciens


organism_name: Bifidobacterium bifidum


organism_name: Eubacterium sp.


organism_name: Dorea longicatena


organism_name: Alistipes putredinis


organism_name: Faecalibacillus faecis


organism_name: Bacteroides ovatus


organism_name: Segatella sp.


organism_name: Blautia faecis


organism_name: Megasphaera massiliensis


organism_name: Ruminococcus callidus


organism_name: Anaerobutyricum soehngenii


organism_name: Phocaeicola sp.


organism_name: Agathobacter rectalis


organism_name: Roseburia faecis


organism_name: Bifidobacterium adolescentis


organism_name: Collinsella sp.


organism_name: Anaerostipes hadrus


organism_name: Dialister hominis


organism_name: Gemmiger qucibialis


organism_name: Gemmiger formicilis


organism_name: Akkermansia muciniphila


organism_name: Bifidobacterium longum


organism_name: Ligilactobacillus ruminis


organism_name: Caecibacter sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Acidaminococcus sp.


organism_name: Dorea longicatena


organism_name: Eggerthella sp.


organism_name: Faecalibacterium sp.


organism_name: Agathobaculum sp.


organism_name: Fusicatenibacter saccharivorans


organism_name: Agathobacter rectalis


organism_name: Alistipes putredinis


organism_name: Collinsella sp.


organism_name: Oscillospiraceae bacterium


organism_name: Ruminococcus callidus


organism_name: Escherichia coli


organism_name: Blautia sp.


organism_name: Blautia faecis


organism_name: Ruminococcus sp.


organism_name: Dialister hominis


organism_name: Bifidobacterium adolescentis


organism_name: Blautia wexlerae


organism_name: Akkermansia muciniphila


organism_name: Ligilactobacillus ruminis


organism_name: Agathobaculum butyriciproducens


organism_name: Anaerostipes hadrus


organism_name: Acutalibacteraceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Gemmiger qucibialis


organism_name: Agathobacter rectalis


organism_name: Gemmiger formicilis


organism_name: Fusicatenibacter saccharivorans


organism_name: Dorea sp.


organism_name: Anaerobutyricum soehngenii


organism_name: Bifidobacterium longum


organism_name: Caecibacter sp.


organism_name: Ruminococcus sp.


organism_name: Alistipes putredinis


organism_name: Dialister hominis


organism_name: Collinsella sp.


organism_name: Dorea formicigenerans


organism_name: Ligilactobacillus ruminis


organism_name: [Ruminococcus] lactaris


organism_name: Alistipes inops


organism_name: Oliverpabstia sp.


organism_name: Segatella copri


organism_name: Blautia sp.


organism_name: [Clostridium] leptum


organism_name: Clostridia bacterium


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Roseburia faecis


organism_name: Fusicatenibacter saccharivorans


organism_name: Agathobaculum sp.


organism_name: Eubacterium sp.


organism_name: Gemmiger formicilis


organism_name: Ruminococcus bromii


organism_name: Anaerostipes hadrus


organism_name: Candidatus Fimenecus sp.


organism_name: Streptococcus thermophilus


organism_name: Akkermansia muciniphila


organism_name: Dorea longicatena


organism_name: Ruminococcus sp.


organism_name: Allocoprococcus comes


organism_name: Coprococcus sp.


organism_name: Holdemanella porci


organism_name: Dialister succinatiphilus


organism_name: Oliverpabstia sp.


organism_name: Agathobacter sp.


organism_name: Clostridia bacterium


organism_name: Gemmiger qucibialis


organism_name: Streptococcus salivarius


organism_name: Gemmiger formicilis


organism_name: Candidatus Aphodomorpha intestinavium


organism_name: Candidatus Ventricola sp.


organism_name: Collinsella sp.


organism_name: Fusicatenibacter saccharivorans


organism_name: Lactobacillus delbrueckii


organism_name: Candidatus Fimenecus sp.


organism_name: Hominenteromicrobium sp.


organism_name: Catenibacterium mitsuokai


organism_name: Anaerostipes hadrus


organism_name: Holdemanella biformis


organism_name: Limosilactobacillus vaginalis


organism_name: Coprococcus sp.


organism_name: Bifidobacterium adolescentis


organism_name: Ruminococcus sp.


organism_name: Methanobrevibacter smithii


organism_name: Gemmiger qucibialis


organism_name: Limosilactobacillus oris


asm_submitter: University Hospital Basel

organism_name: Klebsiella pneumoniae


excluded_from_refseq: from large multi-isolate project

organism_name: Escherichia coli


organism_name: Klebsiella quasipneumoniae


excluded_from_refseq: contaminated; from large multi-isolate project


organism_name: Klebsiella variicola


organism_name: Clostridia bacterium


organism_name: Agathobaculum sp.


organism_name: Candidatus Fimivicinus sp.


organism_name: Oscillospiraceae bacterium


organism_name: Alistipes shahii


organism_name: Alistipes putredinis


organism_name: Roseburia hominis


organism_name: Bacteroides uniformis


organism_name: Dysosmobacter welbionis


organism_name: Faecalibacterium prausnitzii


organism_name: Lachnospiraceae bacterium


organism_name: Anaerostipes hadrus


organism_name: Paraprevotella clara


organism_name: Barnesiella intestinihominis


organism_name: Escherichia coli


organism_name: [Eubacterium] siraeum


organism_name: Mediterraneibacter torques


organism_name: Eubacterium sp.


organism_name: Lachnospira eligens


organism_name: Dialister hominis


organism_name: Desulfovibrio sp.


organism_name: Agathobacter rectalis


organism_name: Oscillospiraceae bacterium


organism_name: [Lactobacillus] rogosae


organism_name: Parabacteroides distasonis


organism_name: Akkermansia sp.


organism_name: Alistipes finegoldii


organism_name: Blautia sp.


organism_name: Gallintestinimicrobium sp.


organism_name: Blautia wexlerae


organism_name: Roseburia faecis


organism_name: Segatella copri


organism_name: Fusicatenibacter saccharivorans


organism_name: Parasutterella sp.


organism_name: Phocaeicola vulgatus


organism_name: Lachnospira sp.


organism_name: Anaerobutyricum soehngenii


organism_name: Enterocloster sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Ruminococcus sp.


organism_name: Dialister invisus


organism_name: Eubacterium sp.


organism_name: Eggerthella lenta


organism_name: Oliverpabstia sp.


organism_name: Lawsonibacter sp.


organism_name: Roseburia intestinalis


organism_name: Sellimonas intestinalis


organism_name: Agathobaculum sp.


organism_name: Alistipes finegoldii


organism_name: [Clostridium] leptum


excluded_from_refseq: derived from metagenome; fragmented assembly


organism_name: Clostridia bacterium


organism_name: Akkermansia muciniphila


organism_name: Mediterraneibacter torques


organism_name: Bacteroides uniformis


organism_name: Gemmiger qucibialis


organism_name: Parabacteroides distasonis


organism_name: Candidatus Fimivicinus sp.


organism_name: Roseburia inulinivorans


organism_name: Lachnospira eligens


organism_name: Lachnospiraceae bacterium


organism_name: Mediterraneibacter faecis


organism_name: Candidatus Scatousia sp.


organism_name: Candidatus Fimisoma sp.


organism_name: Ruminococcus sp.


organism_name: Blautia sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Eggerthellaceae bacterium


organism_name: Candidatus Pelethousia gallinarum


organism_name: Candidatus Anaerobutyricum stercoris


organism_name: Anaerostipes caccae


organism_name: Gordonibacter sp.


organism_name: Candidatus Limiplasma pullistercoris


organism_name: Paraprevotella clara


organism_name: Adlercreutzia sp.


organism_name: Bacteroides uniformis


organism_name: Candidatus Caccousia sp.


organism_name: Alistipes putredinis


organism_name: Butyrivibrio sp.


organism_name: Candidatus Evtepia faecigallinarum


organism_name: [Lactobacillus] rogosae


organism_name: Negativibacillus massiliensis


organism_name: Candidatus Onthocola sp.


organism_name: Frisingicoccus sp.


organism_name: Anaerotignum lactatifermentans


organism_name: Ruthenibacterium lactatiformans


organism_name: Faecousia sp.


organism_name: Monoglobaceae bacterium


organism_name: Candidatus Acutalibacter stercoravium


organism_name: Blautia sp.


organism_name: Oscillospiraceae bacterium


organism_name: Thomasclavelia ramosa


organism_name: Eggerthella lenta


organism_name: Flavonifractor plautii


organism_name: Bacteroides ovatus


organism_name: Mediterraneibacter faecis


organism_name: Ventrimonas sp.


organism_name: Candidatus Scatovicinus merdipullorum


organism_name: Bacteroides eggerthii


organism_name: Blautia wexlerae


organism_name: Longicatena caecimuris


organism_name: Candidatus Limenecus avicola


organism_name: Mediterraneibacter torques


organism_name: Ruthenibacterium sp.


organism_name: Candidatus Scatomorpha merdipullorum


organism_name: Dysosmobacter welbionis


organism_name: Enterocloster bolteae


organism_name: Candidatus Fimivicinus sp.


organism_name: Acidaminococcaceae bacterium


organism_name: Ruminococcus sp.


organism_name: Clostridia bacterium


organism_name: Barnesiella intestinihominis


organism_name: Butyribacter sp.


organism_name: Faecousia sp.


organism_name: Dialister invisus


organism_name: Agathobacter rectalis


organism_name: Akkermansia muciniphila


organism_name: Lachnospiraceae bacterium


organism_name: Odoribacter splanchnicus


organism_name: Christensenellales bacterium


organism_name: Candidatus Spyradocola merdavium


organism_name: Parabacteroides distasonis


organism_name: Dorea longicatena


organism_name: Anaerostipes hadrus


organism_name: Candidatus Acutalibacter stercoravium


organism_name: Anaerobutyricum soehngenii


organism_name: Candidatus Fimivicinus sp.


organism_name: Alistipes putredinis


organism_name: Parabacteroides merdae


organism_name: Waltera sp.


organism_name: Bacteroides caccae


organism_name: Candidatus Acutalibacter ornithocaccae


organism_name: Blautia sp.


organism_name: Methanomassiliicoccus sp.


organism_name: Ruthenibacterium sp.


organism_name: [Lactobacillus] rogosae


organism_name: Alistipes sp.


organism_name: Gemmiger qucibialis


organism_name: Enterocloster sp.


organism_name: Mediterraneibacter torques


organism_name: Eubacterium ramulus


organism_name: Segatella copri


organism_name: Lachnospira sp.


organism_name: Prevotella sp.


excluded_from_refseq: derived from metagenome; genome length too small; genus undefined

organism_name: [Eubacterium] siraeum


organism_name: Anaerostipes hadrus


organism_name: Roseburia intestinalis


organism_name: Collinsella sp.


organism_name: Blautia faecis


organism_name: Acutalibacteraceae bacterium


organism_name: Anaerotignum faecicola


organism_name: Slackia isoflavoniconvertens


organism_name: Clostridium paraputrificum


organism_name: Intestinibacter bartlettii


organism_name: Mediterraneibacter faecis


organism_name: Agathobaculum butyriciproducens


organism_name: Enterocloster sp.


organism_name: Phascolarctobacterium succinatutens


organism_name: Gemmiger sp.


organism_name: Thomasclavelia ramosa


organism_name: Oscillospiraceae bacterium


organism_name: Oliverpabstia sp.


organism_name: Lachnospira sp.


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome


organism_name: Phocaeicola vulgatus


organism_name: Blautia sp.


organism_name: Alistipes putredinis


organism_name: Agathobacter rectalis


organism_name: Escherichia coli


organism_name: Parabacteroides merdae


organism_name: Mediterraneibacter torques


organism_name: Barnesiella intestinihominis


organism_name: Anaerostipes hadrus


organism_name: Bacteroides uniformis


organism_name: Fusicatenibacter saccharivorans


organism_name: Gemmiger qucibialis


organism_name: Ligilactobacillus animalis


organism_name: Dialister hominis


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; genome length too small

organism_name: Anaerobutyricum hallii


organism_name: Hominenteromicrobium sp.


organism_name: Anaerobutyricum soehngenii


organism_name: Frisingicoccus sp.


organism_name: Candidatus Merdibacter merdigallinarum


organism_name: Akkermansia sp.


excluded_from_refseq: derived from metagenome; genome length too large

organism_name: Streptococcus thermophilus


organism_name: Hungatella sp.


organism_name: Clostridium sp.


organism_name: Christensenellales bacterium


organism_name: Collinsella sp.


organism_name: Blautia hydrogenotrophica


organism_name: Thomasclavelia ramosa


organism_name: Escherichia coli


organism_name: Ruthenibacterium lactatiformans


organism_name: Oscillospiraceae bacterium


organism_name: Eggerthella lenta


organism_name: Blautia wexlerae


organism_name: Alistipes onderdonkii


organism_name: Parabacteroides merdae


organism_name: Agathobacter rectalis


organism_name: Roseburia inulinivorans


organism_name: Phocaeicola vulgatus


organism_name: Anaerobutyricum hallii


organism_name: Bacteroides stercoris


organism_name: Hominenteromicrobium sp.


organism_name: Bifidobacterium adolescentis


organism_name: Gemmiger formicilis


organism_name: Faecalibacterium prausnitzii


organism_name: Gemmiger qucibialis


organism_name: Blautia sp.


organism_name: [Eubacterium] siraeum


organism_name: Dialister invisus


organism_name: Anaerostipes hadrus


organism_name: Mediterraneibacter torques


organism_name: Butyricimonas virosa


organism_name: Eubacterium sp.


organism_name: Parasutterella excrementihominis


organism_name: Ruminococcus sp.


organism_name: Angelakisella sp.


organism_name: Blautia wexlerae


organism_name: Lachnospira sp.


organism_name: Anaerovoracaceae bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Paraprevotella clara


organism_name: Gemmiger formicilis


organism_name: Prevotella sp.


organism_name: Alistipes onderdonkii


organism_name: Gemmiger qucibialis


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Candidatus Limisoma sp.


organism_name: Megasphaera massiliensis


organism_name: Bifidobacterium longum


organism_name: Fusicatenibacter saccharivorans


organism_name: Parabacteroides distasonis


organism_name: Streptococcus salivarius


organism_name: Butyribacter intestini


organism_name: Methanobrevibacter smithii


organism_name: Negativibacillus sp.


organism_name: Mediterraneibacter torques


organism_name: Oscillospiraceae bacterium


organism_name: Acidaminococcus intestini


organism_name: Duodenibacillus massiliensis


organism_name: Dysosmobacter sp.


organism_name: Phocaeicola vulgatus


organism_name: Acutalibacteraceae bacterium


organism_name: Hominenteromicrobium sp.


organism_name: Phocaeicola massiliensis


organism_name: Blautia sp.


organism_name: Collinsella aerofaciens


organism_name: Ligilactobacillus ruminis


organism_name: Agathobacter rectalis


organism_name: Turicibacter sp.


organism_name: Faecalimonas umbilicata


organism_name: Lachnospiraceae bacterium


organism_name: Megamonas funiformis


organism_name: Bilophila wadsworthia


organism_name: Blautia wexlerae


organism_name: Holdemanella porci


organism_name: Blautia caecimuris


organism_name: Parabacteroides distasonis


organism_name: Collinsella intestinalis


organism_name: Flavonifractor plautii


organism_name: Negativibacillus sp.


organism_name: Candidatus Stercorousia sp.


organism_name: Enterocloster clostridioformis


organism_name: Mediterraneibacter glycyrrhizinilyticus


organism_name: Fusobacterium sp.


organism_name: Eubacterium ramulus


organism_name: Bifidobacterium pullorum


organism_name: Ruminococcus sp.


organism_name: Roseburia intestinalis


organism_name: Agathobacter rectalis


organism_name: Phocaeicola vulgatus


organism_name: Gemmiger formicilis


organism_name: Oscillospiraceae bacterium


organism_name: Coprococcus sp.


organism_name: Anaerostipes hadrus


organism_name: Faecalibacillus faecis


organism_name: Blautia wexlerae


organism_name: Alistipes shahii


organism_name: Parabacteroides merdae


organism_name: Lachnospira sp.


organism_name: Candidatus Fimenecus sp.


organism_name: Anaerotignum sp.


organism_name: Akkermansia muciniphila


organism_name: Alistipes putredinis


organism_name: Phascolarctobacterium faecium


organism_name: Ruminococcus callidus


organism_name: Ruminococcus sp.


organism_name: Negativibacillus sp.


organism_name: Collinsella tanakaei


organism_name: Candidatus Scybalenecus sp.


organism_name: Gemmiger formicilis


organism_name: Bacteroides stercoris


organism_name: Faecousia sp.


organism_name: Klebsiella variicola


organism_name: Mediterraneibacter torques


organism_name: Lachnospiraceae bacterium


organism_name: Lachnospira eligens


organism_name: Collinsella sp.


organism_name: Christensenellales bacterium


organism_name: Anaerobutyricum soehngenii


organism_name: Phocaeicola plebeius


organism_name: Alistipes onderdonkii


organism_name: Oscillospiraceae bacterium


organism_name: Agathobacter rectalis


organism_name: Bifidobacterium adolescentis


organism_name: Fusicatenibacter saccharivorans


organism_name: Blautia wexlerae


organism_name: Eubacteriales bacterium


organism_name: Hominenteromicrobium sp.


organism_name: Phascolarctobacterium faecium


organism_name: [Clostridium] scindens


organism_name: Blautia sp.


organism_name: Frisingicoccus sp.


organism_name: Flavonifractor plautii


organism_name: Acutalibacteraceae bacterium


organism_name: Blautia caecimuris


organism_name: Adlercreutzia equolifaciens subsp. celatus


organism_name: Sellimonas intestinalis


organism_name: Eisenbergiella tayi


organism_name: Streptococcus sp.


organism_name: Enterococcus faecalis


organism_name: Alistipes shahii


organism_name: Oscillospiraceae bacterium


organism_name: Lactobacillus gasseri


organism_name: Candidatus Fimisoma sp.


organism_name: Eubacterium callanderi


organism_name: Alistipes putredinis


organism_name: Alistipes sp.


organism_name: Hominenteromicrobium sp.


organism_name: Parabacteroides goldsteinii


organism_name: Parabacteroides distasonis


organism_name: Lawsonibacter sp.


organism_name: Blautia sp.


organism_name: Blautia hydrogenotrophica


organism_name: Mediterraneibacter torques


organism_name: Limosilactobacillus fermentum


organism_name: Ruthenibacterium lactatiformans


organism_name: Streptococcus salivarius


organism_name: Anaerostipes hadrus


organism_name: Candidatus Scybalocola (ex Gilroy et al. 2021) sp.


organism_name: Phascolarctobacterium faecium


organism_name: Neglectibacter sp.


organism_name: Agathobacter rectalis


organism_name: Eggerthella lenta


organism_name: Bifidobacterium bifidum


organism_name: Adlercreutzia sp.


organism_name: Faecalibacillus intestinalis


organism_name: Anaerobutyricum hallii


organism_name: Prevotella sp.


organism_name: Gemmiger qucibialis


organism_name: Blautia sp.


organism_name: Sutterella wadsworthensis


organism_name: Eubacterium sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Agathobaculum sp.


organism_name: Segatella copri


organism_name: Lachnospira eligens


organism_name: Phocaeicola plebeius


organism_name: Fusicatenibacter saccharivorans


organism_name: Gemmiger formicilis


organism_name: Lachnospiraceae bacterium


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Ruminococcus sp.


organism_name: [Ruminococcus] lactaris


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Parasutterella sp.


organism_name: Alistipes finegoldii


organism_name: Faecalibacterium prausnitzii


organism_name: Bacteroides caccae


organism_name: Akkermansia sp.


organism_name: Agathobacter rectalis


organism_name: Waltera sp.


organism_name: Alistipes putredinis


organism_name: Bacteroides uniformis


organism_name: Faecalibacterium sp.


organism_name: Alistipes sp.


organism_name: Oscillospiraceae bacterium


organism_name: Candidatus Fimivicinus sp.


organism_name: [Clostridium] leptum


organism_name: Acutalibacter sp.


organism_name: Escherichia coli


organism_name: Dysosmobacter sp.


organism_name: [Clostridium] symbiosum


organism_name: Phascolarctobacterium faecium


organism_name: Candidatus Scatocola faecipullorum


organism_name: Phocaeicola vulgatus


organism_name: Bacteroides ovatus


organism_name: Roseburia intestinalis


organism_name: Anaerotruncus massiliensis (ex Liu et al. 2021)


organism_name: [Eubacterium] siraeum


organism_name: Parabacteroides distasonis


organism_name: Anaeromassilibacillus sp.


organism_name: Clostridia bacterium


organism_name: Alistipes finegoldii


organism_name: Ruminococcus sp.


organism_name: Candidatus Spyradomonas sp.


organism_name: Faecalibacterium sp.


organism_name: Bacteroides uniformis


organism_name: Sutterella wadsworthensis


organism_name: Alistipes putredinis


organism_name: Lachnospiraceae bacterium


organism_name: Klebsiella ornithinolytica


organism_name: Christensenellales bacterium


organism_name: Phocaeicola dorei


organism_name: Candidatus Aphodousia faecalis


organism_name: Akkermansia sp.


organism_name: [Eubacterium] siraeum


organism_name: Candidatus Ventrisoma faecale


organism_name: Candidatus Fimivicinus sp.


organism_name: Candidatus Bilophila faecipullorum


organism_name: Butyribacter sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Parabacteroides distasonis


organism_name: Agathobacter rectalis


organism_name: Dysosmobacter sp.


organism_name: Escherichia coli


organism_name: Alistipes sp.


organism_name: Alistipes putredinis


organism_name: Bacteroides uniformis


organism_name: Candidatus Scybalocola faecigallinarum


organism_name: Phocaeicola vulgatus


organism_name: Prevotella sp.


organism_name: Waltera sp.


organism_name: Oscillospiraceae bacterium


organism_name: Parabacteroides merdae


organism_name: Anaerotignum lactatifermentans


organism_name: Ruthenibacterium lactatiformans


organism_name: Alistipes finegoldii


organism_name: Phascolarctobacterium faecium


organism_name: Alistipes shahii


organism_name: Ruminococcus sp.


organism_name: Akkermansia sp.


organism_name: Roseburia faecis


organism_name: Phocaeicola massiliensis


organism_name: Barnesiella intestinihominis


organism_name: Phocaeicola plebeius


organism_name: Dysosmobacter sp.


organism_name: Phocaeicola vulgatus


organism_name: Alistipes putredinis


organism_name: Parabacteroides distasonis


organism_name: Barnesiella sp.


organism_name: Bacteroides sp.


organism_name: Akkermansia muciniphila


organism_name: Oscillospiraceae bacterium


organism_name: Waltera sp.


organism_name: Sutterella wadsworthensis


organism_name: Desulfovibrio sp.


organism_name: Lachnospiraceae bacterium


organism_name: Christensenellales bacterium


organism_name: Muribaculaceae bacterium


organism_name: Alistipes onderdonkii


organism_name: Faecalibacterium prausnitzii


organism_name: Bacteroides uniformis


organism_name: Roseburia intestinalis


organism_name: Ruminiclostridium sp.


organism_name: Prevotella sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Bacteroides cellulosilyticus


organism_name: Alistipes sp.


organism_name: Akkermansia muciniphila


organism_name: [Eubacterium] siraeum


organism_name: Agathobacter rectalis


organism_name: Escherichia coli


organism_name: Oscillospiraceae bacterium


organism_name: Phocaeicola vulgatus


organism_name: Klebsiella pneumoniae


organism_name: Bacteroides thetaiotaomicron


organism_name: Bacteroides xylanisolvens


organism_name: Parabacteroides goldsteinii


organism_name: Alistipes finegoldii


organism_name: Ruminococcus sp.


organism_name: Candidatus Fimenecus sp.


organism_name: Bacteroides salyersiae


organism_name: Bacteroides uniformis


organism_name: Gemmiger qucibialis


organism_name: Collinsella sp.


organism_name: Parabacteroides distasonis


organism_name: Alistipes putredinis


organism_name: Acidaminococcus intestini


organism_name: Alistipes onderdonkii


organism_name: Barnesiella intestinihominis


organism_name: Oscillospiraceae bacterium


organism_name: Faecalibacterium sp.


organism_name: Christensenellales bacterium


organism_name: [Eubacterium] siraeum


organism_name: Phocaeicola vulgatus


organism_name: Dysosmobacter sp.


organism_name: Agathobacter rectalis


organism_name: Fusicatenibacter saccharivorans


organism_name: Bacteroides cellulosilyticus


organism_name: Ruminococcus sp.


organism_name: Odoribacter laneus


organism_name: [Lactobacillus] rogosae


organism_name: Parasutterella excrementihominis


organism_name: Waltera sp.


organism_name: Enterocloster sp.


organism_name: Alistipes onderdonkii


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; genome length too small

organism_name: Lachnospira eligens


organism_name: Mediterraneibacter torques


organism_name: Eshraghiella crossota


organism_name: Angelakisella sp.


organism_name: Bacteroides uniformis


organism_name: Methanobrevibacter sp.


organism_name: Bacteroides intestinalis


organism_name: Phocaeicola vulgatus


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Christensenellales bacterium


organism_name: Klebsiella ornithinolytica


organism_name: Klebsiella oxytoca


organism_name: Citrobacter portucalensis


excluded_from_refseq: contaminated


organism_name: Enterobacter cloacae


organism_name: Citrobacter freundii


organism_name: Morganella morganii


organism_name: Citrobacter amalonaticus


organism_name: Citrobacter europaeus


organism_name: Enterobacter hormaechei


organism_name: Klebsiella aerogenes


organism_name: Citrobacter koseri


organism_name: Shigella boydii


organism_name: Proteus mirabilis


organism_name: Serratia marcescens


organism_name: Enterobacter roggenkampii


organism_name: Serratia fonticola


organism_name: Moellerella wisconsensis


organism_name: Candidatus Fimenecus sp.


organism_name: Christensenellales bacterium


organism_name: Collinsella sp.


organism_name: Sutterella sp.


organism_name: Oscillospiraceae bacterium


organism_name: Bacteroides ovatus


organism_name: Escherichia coli


organism_name: Dysosmobacter sp.


organism_name: Acidaminococcus intestini


organism_name: Alistipes putredinis


organism_name: Alistipes sp.


organism_name: [Eubacterium] siraeum


organism_name: Roseburia faecis


organism_name: Lachnospira eligens


organism_name: Barnesiella intestinihominis


organism_name: Faecousia sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Akkermansia sp.


organism_name: Bacteroides uniformis


organism_name: Gemmiger formicilis


organism_name: Butyricimonas faecihominis


organism_name: Angelakisella sp.


organism_name: Oscillospiraceae bacterium


organism_name: [Clostridium] leptum


organism_name: Candidatus Scatocola faecipullorum


organism_name: Anaerotruncus colihominis


organism_name: Phascolarctobacterium faecium


organism_name: Lachnospiraceae bacterium


organism_name: Neglectibacter timonensis


organism_name: Agathobacter rectalis


organism_name: Ruthenibacterium lactatiformans


organism_name: Bilophila wadsworthia


organism_name: Alistipes onderdonkii


organism_name: Escherichia coli


organism_name: Collinsella aerofaciens


organism_name: Parabacteroides merdae


organism_name: Acutalibacteraceae bacterium


organism_name: Candidatus Avimonas narfae


organism_name: Candidatus Fimivicinus sp.


organism_name: Gemmiger formicilis


organism_name: Gemmiger qucibialis


organism_name: Akkermansia sp.


organism_name: Streptococcus thermophilus


organism_name: Alistipes finegoldii


organism_name: Parabacteroides distasonis


organism_name: Roseburia inulinivorans


organism_name: Bacteroides thetaiotaomicron


organism_name: Phocaeicola dorei


organism_name: Alistipes putredinis


organism_name: Waltera sp.


organism_name: Sutterella wadsworthensis


organism_name: Akkermansia muciniphila


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Bilophila wadsworthia


organism_name: Alistipes shahii


organism_name: Acidaminococcus intestini


excluded_from_refseq: derived from metagenome

organism_name: Candidatus Scatocola faecipullorum


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Alistipes onderdonkii


organism_name: Alistipes sp.


organism_name: Ruminococcus sp.


organism_name: Bacteroides uniformis


organism_name: Parasutterella excrementihominis


organism_name: Parabacteroides distasonis


organism_name: Lachnospira sp.


organism_name: Blautia wexlerae


organism_name: Alphaproteobacteria bacterium


organism_name: Bacteroides xylanisolvens


organism_name: Agathobacter rectalis


organism_name: Dialister invisus


organism_name: Phascolarctobacterium faecium


organism_name: Collinsella aerofaciens


organism_name: Roseburia faecis


organism_name: Eggerthellaceae bacterium


organism_name: [Lactobacillus] rogosae


organism_name: Eggerthella lenta


organism_name: Blautia sp.


organism_name: Faecalibacterium sp.


organism_name: Agathobaculum sp.


organism_name: Adlercreutzia sp.


organism_name: Escherichia coli


organism_name: Neglectibacter timonensis


organism_name: Roseburia hominis


organism_name: Dorea formicigenerans


organism_name: Gemmiger qucibialis


organism_name: [Clostridium] leptum


organism_name: Lachnospira eligens


organism_name: Acutalibacteraceae bacterium


organism_name: Waltera sp.


organism_name: Evtepia gabavorous


organism_name: Candidatus Limiplasma merdipullorum


organism_name: Massilistercora timonensis


organism_name: Candidatus Faecivicinus avistercoris


organism_name: Blautia faecis


organism_name: Oliverpabstia sp.


organism_name: Oscillospiraceae bacterium


organism_name: Butyribacter sp.


organism_name: Candidatus Acutalibacter stercoravium


organism_name: Lachnospiraceae bacterium


organism_name: Mediterraneibacter torques


organism_name: Christensenellales bacterium


organism_name: Alistipes sp.


organism_name: Ruthenibacterium lactatiformans


organism_name: Ruminococcus sp.


organism_name: Parabacteroides merdae


organism_name: Methanobrevibacter smithii


organism_name: Eisenbergiella porci


organism_name: Christensenellaceae bacterium


organism_name: Acutalibacter sp.


organism_name: Desulfovibrio fairfieldensis


organism_name: Dorea longicatena


organism_name: Parabacteroides distasonis


organism_name: Anaerobutyricum hallii


organism_name: Alistipes communis


organism_name: Odoribacter splanchnicus


organism_name: Alistipes onderdonkii


organism_name: Alistipes putredinis


organism_name: Oscillospiraceae bacterium


organism_name: Eggerthellaceae bacterium


organism_name: Alistipes ihumii


organism_name: Eubacterium sp.


organism_name: Lachnospiraceae bacterium


organism_name: Bacteroides uniformis


organism_name: Barnesiella intestinihominis


organism_name: Ruminococcus sp.


organism_name: Agathobacter rectalis


organism_name: Streptococcus sp.


organism_name: Blautia wexlerae


organism_name: Christensenellales bacterium


organism_name: [Lactobacillus] rogosae


organism_name: Clostridia bacterium


organism_name: Fusicatenibacter saccharivorans


organism_name: Mediterraneibacter torques


organism_name: Blautia sp.


organism_name: Phascolarctobacterium faecium


organism_name: Faecalibacillus intestinalis


organism_name: Oscillospiraceae bacterium


organism_name: Dorea sp.


organism_name: Coprococcus sp.


organism_name: Candidatus Scatocola faecipullorum


organism_name: Adlercreutzia sp.


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Roseburia intestinalis


organism_name: Blautia faecis


organism_name: Prevotella sp.


organism_name: Anaerostipes hadrus


organism_name: Blautia wexlerae


organism_name: Anaerobutyricum hallii


organism_name: Eisenbergiella sp.


organism_name: Bacteroides thetaiotaomicron


organism_name: Bifidobacterium longum


organism_name: Bacteroidales bacterium


organism_name: Enterocloster bolteae


organism_name: Clostridium sp.


organism_name: Dysosmobacter welbionis


organism_name: Alistipes onderdonkii


organism_name: Blautia sp.


organism_name: Phascolarctobacterium faecium


organism_name: Thomasclavelia ramosa


organism_name: Parabacteroides distasonis


organism_name: Alistipes putredinis


organism_name: Candidatus Fimivicinus sp.


organism_name: Coprobacter sp.


organism_name: Phocaeicola dorei


organism_name: Adlercreutzia sp.


organism_name: Akkermansia muciniphila


organism_name: Emergencia timonensis


organism_name: Bacteroides uniformis


organism_name: Eggerthella lenta


organism_name: Candidatus Scatavimonas sp.


organism_name: Blautia obeum


organism_name: Candidatus Anaerobutyricum stercoris


organism_name: Lachnospiraceae bacterium


organism_name: [Clostridium] innocuum


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Methanobrevibacter smithii


organism_name: Blautia wexlerae


organism_name: Negativibacillus massiliensis


organism_name: Collinsella sp.


organism_name: Gemmiger qucibialis


organism_name: Mediterraneibacter torques


organism_name: Oscillospiraceae bacterium


organism_name: Waltera sp.


organism_name: Evtepia gabavorous


organism_name: Alistipes onderdonkii


organism_name: Mediterraneibacter gnavus


organism_name: [Eubacterium] siraeum


organism_name: Monoglobus pectinilyticus


organism_name: Acutalibacteraceae bacterium


organism_name: Candidatus Limiplasma merdipullorum


organism_name: Ruminococcus sp.


organism_name: Lachnospiraceae bacterium


organism_name: Candidatus Acutalibacter ornithocaccae


organism_name: Candidatus Limadaptatus sp.


organism_name: Bacteroides xylanisolvens


organism_name: Lachnospira eligens


organism_name: Intestinibacter sp.


organism_name: Agathobacter rectalis


organism_name: Angelakisella sp.


organism_name: Candidatus Egerieisoma sp.


organism_name: Oscillospiraceae bacterium


organism_name: [Clostridium] innocuum


organism_name: Frisingicoccus sp.


organism_name: Thomasclavelia ramosa


organism_name: Blautia caecimuris


organism_name: Gemmiger formicilis


organism_name: Candidatus Alistipes avistercoris


organism_name: Candidatus Fimisoma sp.


organism_name: Adlercreutzia equolifaciens


organism_name: Escherichia coli


organism_name: Akkermansia sp.


organism_name: Eubacterium sp.


organism_name: Candidatus Spyradocola merdavium


organism_name: Faecousia sp.


organism_name: Alistipes putredinis


organism_name: Bifidobacterium longum


organism_name: Acutalibacter sp.


organism_name: Ruthenibacterium lactatiformans


organism_name: Methanobrevibacter smithii


organism_name: Bacteroides intestinalis


organism_name: Hominenteromicrobium sp.


organism_name: Ruminococcus sp.


organism_name: Ventrimonas sp.


organism_name: Dialister invisus


organism_name: Eggerthellaceae bacterium


organism_name: [Clostridium] leptum


organism_name: Angelakisella sp.


organism_name: Oscillospiraceae bacterium


organism_name: Bifidobacterium adolescentis


organism_name: Lachnospira eligens


organism_name: Parabacteroides goldsteinii


excluded_from_refseq: contaminated; annotation fails MAG completeness check; derived from metagenome

organism_name: Coprococcus sp.


organism_name: Collinsella sp.


organism_name: Catenibacterium sp.


organism_name: Anaerostipes hadrus


organism_name: Fusicatenibacter saccharivorans


organism_name: Phocaeicola vulgatus


organism_name: Eubacterium sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Roseburia faecis


organism_name: Alphaproteobacteria bacterium


organism_name: Gemmiger qucibialis


organism_name: Ruminococcus sp.


organism_name: Dysosmobacter sp.


organism_name: Hominenteromicrobium sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Gemmiger formicilis


organism_name: Phascolarctobacterium faecium


organism_name: Alistipes finegoldii


organism_name: Oscillospiraceae bacterium


organism_name: Collinsella aerofaciens


organism_name: Monoglobus pectinilyticus


organism_name: Oliverpabstia sp.


organism_name: Alistipes shahii


organism_name: Frisingicoccus sp.


organism_name: Mediterraneibacter torques


organism_name: Agathobaculum sp.


organism_name: Bilophila wadsworthia


organism_name: Blautia sp.


organism_name: Faecalibacterium sp.


organism_name: Lachnospiraceae bacterium


organism_name: Waltera sp.


organism_name: Candidatus Scybalosoma faecavium


organism_name: Bacteroides thetaiotaomicron


organism_name: Candidatus Gallispira sp.


organism_name: Ruthenibacterium lactatiformans


organism_name: Candidatus Fimivicinus sp.


organism_name: Eubacterium ramulus


organism_name: Anaerotignum lactatifermentans


organism_name: Longicatena caecimuris


organism_name: Anaerostipes hadrus


organism_name: Eggerthella lenta


organism_name: Candidatus Choladousia sp.


organism_name: Clostridia bacterium


organism_name: Adlercreutzia equolifaciens subsp. celatus


organism_name: Blautia wexlerae


organism_name: Roseburia sp.


organism_name: Phocaeicola dorei


organism_name: Blautia sp.


organism_name: Faecousia sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Blautia faecis


organism_name: [Eubacterium] siraeum


organism_name: Hominenteromicrobium sp.


organism_name: Lachnospiraceae bacterium


organism_name: Roseburia hominis


organism_name: Dorea phocaeensis


organism_name: Lachnospira sp.


organism_name: Longibaculum muris


organism_name: Faecalibacterium prausnitzii


organism_name: Coprococcus sp.


organism_name: Clostridia bacterium


organism_name: Alistipes communis


organism_name: Eubacterium sp.


organism_name: Methanobrevibacter smithii


organism_name: Dorea sp.


organism_name: Phascolarctobacterium faecium


organism_name: Duodenibacillus massiliensis


organism_name: Victivallis sp.


organism_name: Bacteroides uniformis


organism_name: Bacilli bacterium


organism_name: Candidatus Pelethocola sp.


organism_name: Christensenellales bacterium


organism_name: Eggerthellaceae bacterium


organism_name: Waltera sp.


organism_name: Alistipes onderdonkii


organism_name: Alistipes putredinis


organism_name: Phocaeicola vulgatus


organism_name: Faecalibacillus faecis


organism_name: Anaerostipes hadrus


organism_name: [Bacteroides] pectinophilus


organism_name: Dysosmobacter sp.


organism_name: Eubacteriales bacterium


organism_name: Akkermansia sp.


organism_name: Bacteroides sp.


organism_name: Candidatus Onthocola sp.


organism_name: Agathobaculum butyriciproducens


organism_name: Candidatus Limenecus sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Agathobacter rectalis


organism_name: Candidatus Pelethenecus sp.


organism_name: Ruminococcus sp.


organism_name: Clostridia bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Collinsella sp.


organism_name: Oscillospiraceae bacterium


organism_name: Bacteroides xylanisolvens


organism_name: Alphaproteobacteria bacterium


organism_name: Mediterraneibacter torques


organism_name: Faecalibacterium sp.


organism_name: Mediterraneibacter gnavus


organism_name: Escherichia coli


organism_name: Eggerthella timonensis


organism_name: Ruminococcus bromii


organism_name: Hominenteromicrobium sp.


organism_name: Veillonella seminalis


organism_name: Flavonifractor plautii


organism_name: Alistipes onderdonkii


organism_name: Eisenbergiella porci


organism_name: Anaerostipes hadrus


organism_name: Parabacteroides distasonis


organism_name: Blautia sp.


organism_name: Dialister invisus


organism_name: Butyricicoccus sp.


organism_name: Anaerotignum lactatifermentans


organism_name: Phocaeicola sp.


organism_name: Thomasclavelia ramosa


organism_name: Prevotella sp.


organism_name: Blautia caecimuris


organism_name: Alistipes finegoldii


organism_name: Barnesiella intestinihominis


organism_name: Culturomica massiliensis


organism_name: Candidatus Merdousia sp.


organism_name: Bacilli bacterium


organism_name: Bacteroidales bacterium


organism_name: Agathobacter rectalis


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Porphyromonas sp.


organism_name: Eubacterium sp.


organism_name: Candidatus Ventricola sp.


organism_name: Angelakisella sp.


organism_name: Christensenellales bacterium


organism_name: Gemmiger qucibialis


excluded_from_refseq: contaminated; unverified source organism; derived from metagenome

organism_name: Bacteroides sp.


organism_name: Ruminococcus sp.


organism_name: Fusicatenibacter saccharivorans


organism_name: Faecalibacterium sp.


organism_name: Escherichia coli


organism_name: Lachnospiraceae bacterium


organism_name: Parabacteroides distasonis


organism_name: Oscillospiraceae bacterium


organism_name: Candidatus Scatocola faecipullorum


organism_name: Holdemanella porci


organism_name: Alistipes putredinis


organism_name: Desulfovibrio piger


organism_name: Alistipes inops


organism_name: Clostridia bacterium


organism_name: Collinsella aerofaciens


organism_name: Anaerostipes hadrus


organism_name: Christensenellales bacterium


organism_name: Akkermansia muciniphila


organism_name: Victivallis lenta


organism_name: Methanobrevibacter smithii


organism_name: Lachnospira eligens


organism_name: Sutterella wadsworthensis


organism_name: Mediterraneibacter torques


organism_name: Eshraghiella crossota


organism_name: Alistipes shahii


organism_name: Escherichia coli


organism_name: Eubacteriales bacterium


organism_name: Agathobacter rectalis


organism_name: Thomasclavelia ramosa


organism_name: Blautia sp.


organism_name: Hungatella sp.


organism_name: Mobiluncus sp.


organism_name: Porphyromonas sp.


organism_name: Candidatus Bilophila faecipullorum


organism_name: Eggerthella lenta


organism_name: Faecousia sp.


organism_name: Longicatena caecimuris


organism_name: [Clostridium] scindens


organism_name: Alistipes putredinis


organism_name: Enterocloster bolteae


organism_name: Candidatus Fimisoma sp.


organism_name: Parabacteroides distasonis


organism_name: Alistipes sp.


organism_name: Dysosmobacter welbionis


organism_name: Candidatus Fimivicinus sp.


organism_name: Bacteroides faecis


organism_name: Ventrimonas sp.


organism_name: Oscillospiraceae bacterium


organism_name: Blautia faecis


organism_name: Bacteroides uniformis


organism_name: Parabacteroides johnsonii


organism_name: Collinsella intestinalis


organism_name: Ruminococcus sp.


organism_name: Akkermansia sp.


organism_name: Akkermansia muciniphila


organism_name: Alistipes onderdonkii


organism_name: Phascolarctobacterium sp.


organism_name: Peptacetobacter sp.


organism_name: [Clostridium] leptum


organism_name: Sutterella wadsworthensis


organism_name: Alistipes finegoldii


organism_name: Enterocloster sp.


organism_name: Acidaminococcus intestini


organism_name: Collinsella sp.


organism_name: Dorea sp.


organism_name: Faecalibacterium sp.


organism_name: Mediterraneibacter torques


organism_name: Hominenteromicrobium sp.


organism_name: Anaerostipes hadrus


organism_name: Blautia faecis


organism_name: Parasutterella excrementihominis


organism_name: Bifidobacterium longum


organism_name: [Lactobacillus] rogosae


organism_name: Acutalibacteraceae bacterium


organism_name: Negativibacillus sp.


organism_name: Gemmiger formicilis


organism_name: Blautia sp.


organism_name: Alistipes shahii


organism_name: Lachnospiraceae bacterium


organism_name: Intestinibacter bartlettii


organism_name: Clostridium sp.


organism_name: Phascolarctobacterium faecium


organism_name: Fusicatenibacter saccharivorans


organism_name: Parabacteroides merdae


organism_name: Alistipes putredinis


organism_name: Roseburia intestinalis


organism_name: Blautia wexlerae


organism_name: Oliverpabstia sp.


organism_name: Eubacterium ventriosum


organism_name: Agathobacter rectalis


organism_name: Blautia obeum


organism_name: Faecalibacterium prausnitzii


organism_name: Mediterraneibacter torques


organism_name: Oscillospiraceae bacterium


organism_name: Prevotella sp.


organism_name: Catenibacterium sp.


organism_name: Holdemanella porci


organism_name: [Eubacterium] siraeum


organism_name: Frisingicoccus sp.


organism_name: Parabacteroides distasonis


organism_name: Akkermansia muciniphila


organism_name: Escherichia coli


organism_name: Hominenteromicrobium sp.


organism_name: Candidatus Fimivicinus sp.


organism_name: Methanobrevibacter smithii


organism_name: Desulfovibrio fairfieldensis


organism_name: Eggerthella lenta


organism_name: Enterocloster bolteae


organism_name: Ruminococcus sp.


organism_name: Ligilactobacillus animalis


organism_name: Desulfovibrio sp.


organism_name: Neglectibacter timonensis


organism_name: Thomasclavelia ramosa


organism_name: Oscillospiraceae bacterium


organism_name: Candidatus Scatomorpha sp.


organism_name: Collinsella sp.


organism_name: Phocaeicola dorei


organism_name: Lachnospiraceae bacterium


organism_name: Ruthenibacterium lactatiformans


organism_name: Phascolarctobacterium succinatutens


organism_name: Bifidobacterium angulatum


organism_name: Prevotella sp.


organism_name: Blautia obeum


organism_name: Candidatus Limisoma sp.


organism_name: Actinomycetota bacterium


organism_name: Gemmiger qucibialis


organism_name: Holdemanella biformis


organism_name: Alloprevotella sp.


organism_name: Prevotellaceae bacterium


organism_name: Alistipes putredinis


organism_name: Bifidobacterium longum


organism_name: Parabacteroides merdae


organism_name: Escherichia coli


organism_name: Hominenteromicrobium sp.


organism_name: Ruminococcus sp.


organism_name: Megasphaera massiliensis


organism_name: Parabacteroides distasonis


organism_name: Methanobrevibacter smithii


organism_name: Acutalibacteraceae bacterium


organism_name: Acidaminococcus intestini


organism_name: Oscillospiraceae bacterium


organism_name: Phascolarctobacterium succinatutens


organism_name: Bifidobacterium adolescentis


organism_name: Dorea sp.


organism_name: Ligilactobacillus ruminis


organism_name: Alistipes onderdonkii


organism_name: Sutterella wadsworthensis


organism_name: Gemmiger formicilis


organism_name: Anaerobutyricum hallii


organism_name: Blautia wexlerae


organism_name: Collinsella sp.


organism_name: Catenibacterium sp.


organism_name: Candidatus Fimenecus sp.


organism_name: Ruminococcus sp.


organism_name: Enterococcus faecium


organism_name: Bifidobacterium bifidum


organism_name: [Clostridium] leptum


organism_name: Oscillospiraceae bacterium


organism_name: Flavonifractor plautii


organism_name: Ruthenibacterium lactatiformans


organism_name: Bacteroides ovatus


organism_name: Mediterraneibacter gnavus


organism_name: Sellimonas intestinalis


organism_name: Lachnospiraceae bacterium


organism_name: Anaerosinus sp.


organism_name: Dysosmobacter welbionis


organism_name: Fusicatenibacter saccharivorans


organism_name: [Lactobacillus] rogosae


organism_name: Eggerthella lenta


organism_name: Mediterraneibacter torques


organism_name: Bacteroides uniformis


organism_name: Escherichia coli


organism_name: Roseburia intestinalis


organism_name: Anaerobutyricum soehngenii


organism_name: Faecousia sp.


organism_name: Bacteroides fragilis


organism_name: Candidatus Fimivicinus sp.


organism_name: Collinsella aerofaciens


organism_name: Candidatus Fimenecus sp.


organism_name: Intestinibacter sp.


organism_name: Eubacteriales bacterium


organism_name: Christensenellales bacterium


organism_name: Pseudoruminococcus massiliensis


organism_name: Oscillospiraceae bacterium


organism_name: Bacilli bacterium


organism_name: Bifidobacterium adolescentis


organism_name: Angelakisella sp.


organism_name: Phascolarctobacterium faecium


organism_name: Eshraghiella crossota


organism_name: Hominenteromicrobium sp.


organism_name: Methanobrevibacter smithii


organism_name: Candidatus Cryptobacteroides sp.


organism_name: [Eubacterium] siraeum


organism_name: Mediterraneibacter torques


organism_name: Fusicatenibacter saccharivorans


organism_name: Agathobacter rectalis


organism_name: Blautia sp.


organism_name: Phocaeicola vulgatus


organism_name: Waltera sp.


organism_name: Eubacterium sp.