excluded_from_refseq: unverified source organism; derived from metagenome; genus undefined


asm_submitter: Institute of Deep-sea Science and Engineering

assembly_level: Contig

assembly_type: haploid

excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

genome_rep: Full

group: bacteria

organism_name: Deltaproteobacteria bacterium

release_type: Major

version_status: latest


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: National Chung Hsing University

assembly_level: Complete Genome

organism_name: Staphylococcus aureus

paired_asm_comp: identical


asm_submitter: National Research and Innovation Agency

organism_name: Lacticaseibacillus rhamnosus


asm_submitter: SLAM

organism_name: Limosilactobacillus mucosae


organism_name: Dehalococcoidia bacterium


organism_name: Anaerolineae bacterium


organism_name: Hyphomicrobiaceae bacterium


organism_name: Candidatus Atribacteria bacterium


organism_name: Candidatus Zixiibacteriota bacterium


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Candidatus Eiseniibacteriota bacterium


organism_name: Planctomycetota bacterium


group: archaea

organism_name: Candidatus Bathyarchaeota archaeon


organism_name: Thermoplasmata archaeon


organism_name: Chloroflexota bacterium


assembly_level: Scaffold


organism_name: Candidatus Goldiibacteriota bacterium


excluded_from_refseq: unverified source organism; derived from metagenome; genome length too small

organism_name: Pseudoalteromonas shioyasakiensis


asm_submitter: Leibniz Institute DSMZ

infraspecific_name: strain=DSM 23630

organism_name: Telmatobacter bradus

refseq_category: reference genome

relation_to_type_material: assembly from type material


organism_name: Caldifarciminota bacterium


organism_name: bacterium


asm_submitter: Public Health England

excluded_from_refseq: from large multi-isolate project

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


organism_name: Thermoplasmatota archaeon


organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Candidatus Omnitrophota bacterium


organism_name: Bacteroidales bacterium


organism_name: Candidatus Woesearchaeota archaeon


excluded_from_refseq: contaminated; derived from metagenome; genus undefined

organism_name: Promethearchaeota archaeon


organism_name: Salmonella enterica subsp. enterica serovar Newport


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genus undefined

organism_name: Methanosarcinales archaeon


organism_name: Salmonella enterica subsp. enterica serovar Bredeney


organism_name: Pediococcus acidilactici


organism_name: Salmonella enterica subsp. enterica


organism_name: Lacticaseibacillus rhamnosus


organism_name: Salmonella enterica subsp. enterica serovar Anatum


asm_submitter: Health Protection Agency

organism_name: Escherichia coli


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Klebsiella pneumoniae


organism_name: Acinetobacter baumannii


organism_name: Proteus mirabilis


organism_name: Candidatus Atribacteria bacterium


organism_name: archaeon


organism_name: Methanobacteriota archaeon


asm_submitter: Quadram Institute Bioscience

organism_name: Listeria monocytogenes


organism_name: Deltaproteobacteria bacterium


asm_submitter: University of Kentucky

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


organism_name: bacterium


organism_name: Enterobacter hormaechei


asm_submitter: CDC


organism_name: Anaerolineae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Candidatus Aminicenantota bacterium


organism_name: Candidatus Nanohaloarchaea archaeon


organism_name: Fidelibacterota bacterium


organism_name: Candidatus Thorarchaeota archaeon


organism_name: Bacteroidales bacterium


organism_name: Acinetobacter baumannii


organism_name: Candidatus Cloacimonadota bacterium


organism_name: Klebsiella michiganensis


organism_name: Phycisphaerae bacterium


organism_name: Pseudomonas aeruginosa


organism_name: Methanosarcinaceae archaeon


organism_name: archaeon


asm_submitter: National Center for Biotechnology Information

organism_name: Vibrio fluvialis


organism_name: Vibrio harveyi


organism_name: Deltaproteobacteria bacterium


organism_name: Spirochaetota bacterium


organism_name: Calditrichales bacterium


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Listeria monocytogenes


organism_name: Candidatus Pacearchaeota archaeon


organism_name: Thermoplasmatota archaeon


organism_name: Vibrio campbellii


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Candidatus Aegiribacteria sp.


organism_name: Candidatus Zixiibacteriota bacterium


organism_name: Anaerolineales bacterium


asm_submitter: Lanzhou Veterinary Research Institute

infraspecific_name: strain=CPS-BY/JY

organism_name: Chlamydia psittaci


organism_name: Candidatus Cloacimonadota bacterium


asm_submitter: Hospital Universitario Marques de Valdecilla

organism_name: Pseudomonas aeruginosa


organism_name: Candidatus Nanohaloarchaea archaeon


organism_name: Phycisphaerae bacterium


organism_name: Methanosarcinales archaeon


organism_name: Deltaproteobacteria bacterium


organism_name: Candidatus Aminicenantota bacterium


organism_name: Anaerolineae bacterium


organism_name: bacterium


organism_name: Candidatus Omnitrophota bacterium


asm_submitter: DinsdaleLab Sequences

excluded_from_refseq: many frameshifted proteins

organism_name: Pseudoalteromonas espejiana


organism_name: Psychrobacter sp. ER1


organism_name: Gammaproteobacteria bacterium


organism_name: Methanobacteriota archaeon


organism_name: Promethearchaeota archaeon


organism_name: archaeon


organism_name: Candidatus Thorarchaeota archaeon


organism_name: Bacteroidales bacterium


excluded_from_refseq: unverified source organism; derived from metagenome; fragmented assembly; genus undefined

organism_name: Ignavibacteriaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Candidatus Bathyarchaeota archaeon


organism_name: Thermoplasmatota archaeon


organism_name: Deltaproteobacteria bacterium


organism_name: Caldifarciminota bacterium


organism_name: Dehalococcoidales bacterium


organism_name: Methanosarcinales archaeon


organism_name: bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Anaerolineales bacterium


organism_name: Gammaproteobacteria bacterium


asm_submitter: Chongqing Medical University

organism_name: Acinetobacter baumannii


asm_submitter: The University of Sydney

organism_name: Pigmentiphaga litoralis


asm_submitter: Institute of Deep-sea Science and Engineering


organism_name: Candidatus Aminicenantota bacterium


organism_name: Phycisphaerae bacterium


organism_name: Methanobacteriota archaeon


organism_name: Campylobacterales bacterium


organism_name: Methanosarcinaceae archaeon


organism_name: Candidatus Atribacteria bacterium


organism_name: Bacteroidales bacterium


organism_name: Candidatus Bathyarchaeota archaeon


excluded_from_refseq: derived from metagenome

organism_name: Draconibacterium sp.


organism_name: archaeon


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Methanococcoides sp.


organism_name: Candidatus Moraniibacteriota bacterium


organism_name: Sulfurovaceae bacterium


organism_name: Anaerolineae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Acidobacteriota bacterium


organism_name: Methyloprofundus sp.


organism_name: Candidatus Aminicenantota bacterium


organism_name: Thermoanaerobaculia bacterium


organism_name: Candidatus Eiseniibacteriota bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Minisyncoccota bacterium


organism_name: Thermodesulfovibrionia bacterium


organism_name: Lysobacterales bacterium


organism_name: Acinetobacter baumannii


excluded_from_refseq: missing tRNA genes


organism_name: Candidatus Krumholzibacteriia bacterium


organism_name: Anaerolineales bacterium


organism_name: Thermoplasmata archaeon


organism_name: Caulobacterales bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Candidatus Marithrix sp.


organism_name: Pirellulales bacterium


organism_name: bacterium


organism_name: Bacteroidales bacterium


organism_name: Candidatus Aminicenantota bacterium


organism_name: Acidobacteriota bacterium


organism_name: Methanosarcinales archaeon


organism_name: Candidatus Altarchaeales archaeon


organism_name: Deltaproteobacteria bacterium


organism_name: Methanobacteriota archaeon


organism_name: Thermoplasmatota archaeon


organism_name: Candidatus Pacearchaeota archaeon


organism_name: Thermodesulfovibrionia bacterium


organism_name: Anaerolineae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Candidatus Atribacteria bacterium


organism_name: Anaerolineales bacterium


organism_name: Methanosarcinaceae archaeon


organism_name: Acinetobacter baumannii


organism_name: archaeon


organism_name: Promethearchaeota archaeon


organism_name: Chloroflexota bacterium


organism_name: Bacteroidales bacterium


organism_name: Desulfobulbaceae bacterium


organism_name: Candidatus Aminicenantota bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Pseudoalteromonas shioyasakiensis


organism_name: Thermoplasmatota archaeon


organism_name: Methanosarcinales archaeon


organism_name: Caldifarciminota bacterium


organism_name: Candidatus Eiseniibacteriota bacterium


organism_name: Methanobacteriota archaeon


organism_name: Candidatus Bathyarchaeota archaeon


organism_name: Candidatus Thorarchaeota archaeon


organism_name: Gammaproteobacteria bacterium


organism_name: Acidobacteriota bacterium


organism_name: Gemmatimonadota bacterium


organism_name: Methanosarcinaceae archaeon


organism_name: Dehalococcoidia bacterium


organism_name: Candidatus Atribacteria bacterium


organism_name: Acinetobacter baumannii


organism_name: Kiritimatiellales bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Anaerolineales bacterium


organism_name: Campylobacterales bacterium


organism_name: Candidatus Aegiribacteria sp.


organism_name: Patescibacteria group bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Chloroflexota bacterium


organism_name: Minisyncoccota bacterium


organism_name: bacterium


organism_name: Sulfurovum sp.


organism_name: Methanosarcinales archaeon


organism_name: Ignavibacteriaceae bacterium


organism_name: Anaerolineae bacterium


organism_name: Methanobacteriota archaeon


organism_name: Gemmatimonadota bacterium


organism_name: Lysobacterales bacterium


organism_name: Methanosarcinaceae archaeon


organism_name: Calditrichales bacterium


organism_name: Anaerolineales bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Acinetobacter baumannii


organism_name: Dehalococcoidia bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Candidatus Nitrosopumilus sp.


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Marinobacter sp.


organism_name: Acidobacteriota bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Sulfurovum sp.


organism_name: Ignavibacteriaceae bacterium


excluded_from_refseq: contaminated; unverified source organism; derived from metagenome

organism_name: Alteromonas abrolhosensis


organism_name: Acidimicrobiia bacterium


organism_name: Oceanospirillum sp.


organism_name: Candidatus Bathyarchaeota archaeon


organism_name: Thermoplasmatota archaeon


organism_name: Salmonella enterica


organism_name: Escherichia coli


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Pseudomonas putida


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Hadar


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Adelaide


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Give


organism_name: Escherichia coli


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Shigella boydii


asm_submitter: Centers for Disease Control and Prevention.  Division of Healthcare Quality Promotion


isolate: clinical


excluded_from_refseq: contaminated; from large multi-isolate project


asm_submitter: Centers for Disease Control and Prevention


organism_name: Streptococcus pneumoniae


organism_name: Acinetobacter baumannii


organism_name: Klebsiella pneumoniae


organism_name: Enterobacter hormaechei


organism_name: Morganella morganii


organism_name: Enterobacter cloacae


asm_submitter: Vet-LIRN-CVM-FDA


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Alachua


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Berta


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Escherichia coli


asm_submitter: FDA Center for Food Safety and Applied Nutrition


asm_submitter: Health Protection Agency


isolate: SHI


asm_submitter: University of Tennessee

isolate: Tanasi

organism_name: Synechococcus sp. 'Tanasi'


asm_submitter: University of Abuja

organism_name: Acinetobacter pittii


asm_submitter: Virginia Tech

organism_name: Candidatus Pseudomonas auctus


asm_submitter: Burdur Mehemet Akif Ersoy University

organism_name: Lactiplantibacillus plantarum


asm_submitter: shri Alpesh N. Patel Post Graduate Institute of Science & Research

organism_name: Bacillus velezensis


asm_submitter: CDC


asm_submitter: Fujian Agricultural University

organism_name: Enterococcus faecalis


organism_name: Enterococcus avium


asm_submitter: Institute of Medicinal Biotechnology

infraspecific_name: strain=CPCC 205120

organism_name: Nocardioides sp. CPCC 205120


infraspecific_name: strain=CPCC 206347

organism_name: Nocardioides sp. CPCC 206347


asm_submitter: National Center for Biotechnology Information

infraspecific_name: strain=E. coli 1


infraspecific_name: strain=E. coli 8


infraspecific_name: strain=CPCC 206348

organism_name: Nocardioides sp. CPCC 206348


infraspecific_name: strain=CPCC 206349

organism_name: Nocardioides sp. CPCC 206349


infraspecific_name: strain=E. coli 36


asm_submitter: First Medical Center of Chinese PLA General Hospital

organism_name: Burkholderia gladioli


asm_submitter: University hospital Lubeck

organism_name: Streptococcus pyogenes


infraspecific_name: strain=E. coli 37


infraspecific_name: strain=E. coli 38


infraspecific_name: strain=E. coli 39


infraspecific_name: strain=E. coli 40


infraspecific_name: strain=E. coli 41


infraspecific_name: strain=E. coli 43


infraspecific_name: strain=E. coli 44


infraspecific_name: strain=E. coli 13


infraspecific_name: strain=E. coli 47


infraspecific_name: strain=E. coli 46


infraspecific_name: strain=E. coli 48


infraspecific_name: strain=E. coli 50


infraspecific_name: strain=E. coli 55


infraspecific_name: strain=E. coli 56


infraspecific_name: strain=E. coli 52


infraspecific_name: strain=E. coli 59


infraspecific_name: strain=E. coli 63


infraspecific_name: strain=E. coli 71


infraspecific_name: strain=E. coli 80


infraspecific_name: strain=E. coli 73


infraspecific_name: strain=E. coli 89


infraspecific_name: strain=E. coli 15


infraspecific_name: strain=E. coli 134


infraspecific_name: strain=E. coli 21


infraspecific_name: strain=E. coli 90


infraspecific_name: strain=E. coli 26


infraspecific_name: strain=E. coli 33


infraspecific_name: strain=E. coli 35


infraspecific_name: strain=E. coli 92


infraspecific_name: strain=E. coli 136


infraspecific_name: strain=E. coli 18


infraspecific_name: strain=E. coli 28


asm_submitter: Nottingham Trent University

organism_name: Serratia marcescens


organism_name: Pseudomonas aeruginosa


organism_name: Shigella sonnei


organism_name: Escherichia coli


organism_name: Klebsiella pneumoniae


asm_submitter: ICMR-National Institute of Cholera and Enteric Diseases


asm_submitter: Southern Methodist University

infraspecific_name: strain=MAR4 CNX-425

organism_name: Streptomyces sp. MAR4 CNX-425


excluded_from_refseq: genus undefined

infraspecific_name: strain=MAR4 CNY-716

organism_name: Streptomyces sp. MAR4 CNY-716


asm_submitter: IIT Roorkee

excluded_from_refseq: fragmented assembly

organism_name: Enterobacter hormaechei


asm_submitter: Jiangsu University

organism_name: Weissella cibaria


organism_name: Leuconostoc pseudomesenteroides


asm_submitter: Health Protection Agency

organism_name: Shigella flexneri


organism_name: Lactiplantibacillus plantarum


organism_name: Leuconostoc citreum


organism_name: Leuconostoc mesenteroides


asm_submitter: FDA


asm_submitter: Washington State Department of Agriculture GenomeTrakr submission group


excluded_from_refseq: annotation fails completeness check; from large multi-isolate project


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


asm_submitter: Vet-LIRN-CVM-FDA


organism_name: Campylobacter jejuni


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Streptococcus pyogenes


asm_submitter: CDC


asm_submitter: The First Affiliated Hospital, Sun Yat-Sen University, Guangzhou

organism_name: Streptococcus anginosus


asm_submitter: Qingdao Agricultural University

infraspecific_name: strain=YZ

organism_name: Escherichia coli O157:H7


organism_name: Shigella sonnei


organism_name: Escherichia coli


asm_submitter: China Agricultural University

infraspecific_name: strain=CGMCC NO.31147

organism_name: Bifidobacterium animalis


asm_submitter: Huazhong Agricultural University

organism_name: Acinetobacter sp. AS3


asm_submitter: FDA Center for Food Safety and Applied Nutrition


asm_submitter: Shenzhen People's Hospital

organism_name: Klebsiella pneumoniae


asm_submitter: National Center for Biotechnology Information


organism_name: Citrobacter freundii


organism_name: Escherichia coli O25b:H4-ST131


organism_name: Vibrio parahaemolyticus


organism_name: Shigella flexneri


isolate: Escherichia coli


asm_submitter: National Institute of Agricultural Sciences

organism_name: Citrobacter sp. BNK-40


organism_name: Citrobacter sp. BNK-42


organism_name: Citrobacter sp. BNK-39


organism_name: Citrobacter sp. BNK-41


organism_name: Enterobacter sp. BNK-34


organism_name: Serratia sp. BNK-33-b


organism_name: Serratia sp. BNK-33-a


organism_name: Enterobacter sp. BNK-32


organism_name: Serratia sp. BNK-31-a


organism_name: Serratia sp. BNK-31-b


organism_name: Escherichia coli


organism_name: Enterobacter sp. BNK-29


organism_name: Enterobacter sp. BNK-22


asm_submitter: 2nd Faculty of Medicine and Motol University Hospital

organism_name: Clostridioides difficile


organism_name: Lysinibacillus sp. BNK-21


organism_name: Serratia sp. BNK-17


organism_name: Enterobacter sp. BNK-16


organism_name: Shigella sonnei


organism_name: Enterobacter sp. BNK-13


organism_name: Enterobacter sp. BNK-9


organism_name: Shigella flexneri


organism_name: Enterobacter sp. BNK-8


organism_name: Serratia sp. BNK-4


organism_name: Enterobacter sp. BNK-3


organism_name: Enterobacter sp. BNK-2


organism_name: Curtobacterium sp. BNK-1


asm_submitter: Shandong Agriculture University

organism_name: Enterococcus cecorum


asm_submitter: Research and Production Enterprise Antigen

infraspecific_name: strain=Antigen 34

organism_name: Bacillus anthracis


asm_submitter: Chinese Academy of Sciences

organism_name: Edwardsiella tarda


organism_name: Escherichia coli


asm_submitter: Health Protection Agency


organism_name: Shigella boydii


asm_submitter: Xizang Agricultural and Animal Husbandry University

organism_name: Listeria monocytogenes


asm_submitter: Universidad de Leon

organism_name: Streptomyces sp. YS-B37


asm_submitter: University of Arizona

organism_name: Pseudomonas viridiflava


organism_name: Shigella sonnei


asm_submitter: Centro de Investigacion en Alimentacion y Desarrollo A. C Coordinacion Culiacan

organism_name: Pseudomonas juntendi


asm_submitter: CDC


organism_name: Shigella dysenteriae


organism_name: Shigella flexneri


asm_submitter: Hainan Medical University

organism_name: Burkholderia thailandensis


asm_submitter: Freshwater Fisheries Research Institute of Jiangsu Province

organism_name: Flavobacterium psychrophilum


asm_submitter: FDA


asm_submitter: UAN

organism_name: Serratia liquefaciens


isolate: 37f fall


isolate: 44w winter


isolate: 49w winter


isolate: 106w winter


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


asm_submitter: Centers for Disease Control and Prevention.  Division of Healthcare Quality Promotion


asm_submitter: National Center for Biotechnology Information


organism_name: Campylobacter jejuni


asm_submitter: USDA FSIS


asm_submitter: national health research institutes

organism_name: Klebsiella pneumoniae


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Pseudomonas aeruginosa


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Klebsiella aerogenes


organism_name: Acinetobacter baumannii


organism_name: Providencia stuartii


asm_submitter: Public Health Agency of Canada

organism_name: Vibrio cholerae


asm_submitter: New York State GenomeTrakr

organism_name: Cronobacter turicensis


organism_name: Cronobacter sakazakii


organism_name: Cronobacter muytjensii


organism_name: Cronobacter dublinensis


organism_name: Escherichia coli


organism_name: Klebsiella pneumoniae


organism_name: Neisseria gonorrhoeae


organism_name: Streptococcus pyogenes


organism_name: Citrobacter freundii


organism_name: Salmonella enterica


organism_name: Shigella sonnei


asm_submitter: Health Protection Agency

organism_name: Listeria monocytogenes


asm_submitter: Public Health England

organism_name: Yersinia enterocolitica


asm_submitter: NJ DOH Public Health Laboratories microbial pathogen submission group

organism_name: Vibrio parahaemolyticus


organism_name: Vibrio vulnificus


isolate: human

organism_name: Acinetobacter baumannii


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


organism_name: Enterobacter hormaechei


isolate: PSC patient

organism_name: Enterococcus faecalis


isolate: Patient


organism_name: Pasteurella multocida


organism_name: Pseudomonas aeruginosa


organism_name: Klebsiella pneumoniae


organism_name: Vibrio cholerae


organism_name: Vibrio fluvialis


organism_name: Streptococcus pyogenes


asm_submitter: University of Ljubljana, Biotechnical Faculty

organism_name: Gluconacetobacter brunescens


asm_submitter: CDC

organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Worthington


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Campylobacter jejuni


asm_submitter: Vet-LIRN-CVM-FDA


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar 1,4,[5],12:b:-


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Klebsiella pneumoniae


organism_name: Acinetobacter baumannii


organism_name: Campylobacter jejuni subsp. jejuni


organism_name: Enterobacter hormaechei


organism_name: Yersinia enterocolitica


organism_name: Klebsiella aerogenes


organism_name: Neisseria meningitidis


organism_name: Campylobacter jejuni


organism_name: Cronobacter sakazakii


organism_name: Cronobacter turicensis


organism_name: Cronobacter dublinensis


organism_name: Campylobacter upsaliensis


organism_name: Campylobacter coli


asm_submitter: FDA/CFSAN


organism_name: Klebsiella variicola


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Ohio


organism_name: Salmonella enterica subsp. enterica serovar Meleagridis


organism_name: Clostridioides difficile


organism_name: Campylobacter jejuni


organism_name: Yersinia enterocolitica


organism_name: Klebsiella pneumoniae


organism_name: Staphylococcus aureus


organism_name: Escherichia coli


organism_name: Streptococcus pneumoniae


organism_name: Vibrio parahaemolyticus


organism_name: Listeria monocytogenes


organism_name: Pseudomonas aeruginosa


organism_name: Enterococcus faecalis


organism_name: Enterococcus faecium


organism_name: Edwardsiella piscicida


organism_name: Streptococcus pyogenes


organism_name: Acinetobacter baumannii


organism_name: Enterobacter hormaechei


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Campylobacter jejuni


organism_name: Vibrio fluvialis


organism_name: Staphylococcus aureus


organism_name: Escherichia coli


organism_name: Shigella flexneri


organism_name: Vibrio parahaemolyticus


organism_name: Klebsiella pneumoniae


organism_name: Pseudomonas aeruginosa


organism_name: Streptococcus pneumoniae


organism_name: Listeria monocytogenes


organism_name: Klebsiella aerogenes


organism_name: Campylobacter coli


asm_submitter: US Food and Drug Administration


asm_submitter: Michigan Department of Health and Human Services


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Acinetobacter baumannii


asm_submitter: National Center for Biotechnology Information

organism_name: Streptococcus pneumoniae


organism_name: Vibrio parahaemolyticus


organism_name: Staphylococcus aureus


organism_name: Yersinia enterocolitica


asm_name: ACI

asm_submitter: Inserm

infraspecific_name: strain=ACI


asm_submitter: Pavol Jozef Safarik University in Kosice, Faculty of Science

organism_name: Pollutimonas rozaliensis


asm_submitter: national health research institutes

organism_name: Klebsiella pneumoniae


asm_submitter: Li Huili Hospital, Ningbo Medical Center


asm_submitter: University of Georgia

organism_name: Curtobacterium aetherium


organism_name: Curtobacterium sp. L1-20


organism_name: Curtobacterium sp. L3-7


organism_name: Klebsiella michiganensis


organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: Public Health England


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Listeria monocytogenes


asm_submitter: Center for Food Safety and Applied Nutrition

organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Litchfield


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar 1,4,5,12:i:-


organism_name: Salmonella enterica subsp. diarizonae serovar 18:I,v:z


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Brandenburg


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Give


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium var. monophasic


organism_name: Klebsiella pneumoniae


organism_name: Listeria monocytogenes


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Acinetobacter baumannii


organism_name: Yersinia enterocolitica


organism_name: Staphylococcus aureus


organism_name: Campylobacter coli


asm_submitter: National Oceanic and Atmospheric Administration

organism_name: Vibrio parahaemolyticus


asm_submitter: FDA Center for Food Safety and Applied Nutrition


organism_name: Pseudomonas aeruginosa


organism_name: Enterobacter kobei


organism_name: Enterobacter roggenkampii


organism_name: Neisseria meningitidis


organism_name: Enterobacter hormaechei


organism_name: Enterobacter asburiae


organism_name: Stenotrophomonas maltophilia


organism_name: Enterobacter hormaechei subsp. xiangfangensis


organism_name: Enterobacter hormaechei subsp. hoffmannii


organism_name: Enterobacter cloacae


organism_name: Enterobacter ludwigii


organism_name: Enterobacter bugandensis


organism_name: Enterobacter mori


organism_name: Enterobacter cloacae subsp. dissolvens


organism_name: Staphylococcus aureus


asm_submitter: CDC

organism_name: Escherichia coli


organism_name: Yersinia enterocolitica


organism_name: Klebsiella pneumoniae


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Acinetobacter baumannii


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Staphylococcus pseudintermedius


organism_name: Bacillus cereus


organism_name: Neisseria meningitidis


organism_name: Pseudomonas aeruginosa


asm_submitter: FDA

organism_name: Campylobacter jejuni


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


isolate: Neuro ICU


isolate: Klebsiella pneumoniae


organism_name: Streptococcus pyogenes


organism_name: Klebsiella aerogenes


asm_submitter: Health Protection Agency


organism_name: Vibrio cholerae


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Enterobacter kobei


organism_name: Enterobacter hormaechei


asm_submitter: National Center for Biotechnology Information

organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Salmonella enterica subsp. enterica serovar Hvittingfoss


organism_name: Salmonella enterica subsp. enterica serovar Weltevreden


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. salamae serovar 42:g,t:-


organism_name: Salmonella enterica subsp. enterica serovar Amsterdam


organism_name: Salmonella enterica subsp. enterica serovar Adelaide


organism_name: Salmonella enterica subsp. enterica serovar Virchow


organism_name: Salmonella enterica subsp. enterica serovar Freetown


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Orion


organism_name: Salmonella enterica subsp. enterica serovar Bredeney


organism_name: Salmonella enterica subsp. enterica serovar Kottbus


organism_name: Salmonella enterica subsp. salamae serovar 1,4,12,[27]:b:[e,n,x]


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Potsdam


organism_name: Salmonella enterica subsp. enterica serovar Onderstepoort


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. salamae serovar 21:z10:z6


organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Salmonella enterica subsp. enterica serovar Singapore


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Havana


organism_name: Salmonella enterica subsp. enterica serovar Aberdeen


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. salamae serovar 42:g,t:-


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Orion


organism_name: Salmonella enterica subsp. enterica serovar Typhi


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Paratyphi A


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Eko


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Enterococcus faecalis


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Enterococcus hirae


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg


asm_submitter: FDA/CFSAN

organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Uganda


organism_name: Legionella pneumophila


organism_name: Klebsiella pneumoniae


organism_name: Neisseria meningitidis


organism_name: Salmonella enterica


organism_name: Enterobacter hormaechei


organism_name: Campylobacter jejuni


organism_name: Enterobacter ludwigii


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


infraspecific_name: strain=Pathogenic/Clinical

organism_name: Acinetobacter baumannii


infraspecific_name: strain=Pathogenic


infraspecific_name: strain=Nil

isolate: Soil Sample


infraspecific_name: strain=MACI-K MDR Acinetobacter

isolate: MDR-Acinetobacter


organism_name: Citrobacter freundii


organism_name: Proteus mirabilis


organism_name: Klebsiella quasipneumoniae


organism_name: Staphylococcus aureus


organism_name: Yersinia enterocolitica


organism_name: Enterococcus faecalis


organism_name: Enterobacter cloacae


organism_name: Salmonella enterica subsp. enterica serovar Javiana


organism_name: Pseudomonas aeruginosa


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Orion


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Panama


organism_name: Salmonella enterica subsp. enterica serovar Give


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Enterococcus faecium


organism_name: Salmonella enterica subsp. enterica serovar Muenster


organism_name: Enterobacter hormaechei


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Thompson


organism_name: Salmonella enterica subsp. enterica serovar Havana


organism_name: Enterococcus faecalis


organism_name: Salmonella enterica subsp. enterica serovar Holcomb


organism_name: Salmonella enterica subsp. enterica serovar Kiambu


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Pseudomonas aeruginosa


organism_name: Neisseria gonorrhoeae


organism_name: Enterobacter hormaechei


organism_name: Klebsiella pneumoniae


organism_name: Klebsiella oxytoca


organism_name: Acinetobacter baumannii


organism_name: Cronobacter malonaticus


organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


organism_name: Enterococcus faecium


organism_name: Enterobacter ludwigii


organism_name: Enterococcus faecalis


organism_name: Shigella flexneri


organism_name: Cronobacter sakazakii


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Streptococcus pyogenes


isolate: hospitalized patient


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


organism_name: Listeria monocytogenes