organism_name: Faecalibacterium prausnitzii


assembly_level: Scaffold

assembly_type: haploid

excluded_from_refseq: derived from metagenome

genome_rep: Full

group: bacteria

organism_name: Bifidobacterium longum

release_type: Major

version_status: latest


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Angelakisella sp.


organism_name: Megasphaera sp.

paired_asm_comp: identical


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Ruminococcus bromii


organism_name: Eubacterium sp.


organism_name: Candidatus Fimenecus sp.


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Bacteroides uniformis


organism_name: Alistipes putredinis


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Lachnospiraceae bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined


organism_name: Ruminococcus sp.


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: Institut Pasteur

organism_name: Pseudomonas paraeruginosa


organism_name: Pseudomonas aeruginosa


asm_submitter: SINTEF Industry

organism_name: Escherichia coli


assembly_level: Contig


asm_submitter: Idaho Bureau of Laboratories

excluded_from_refseq: from large multi-isolate project

organism_name: Streptococcus pyogenes


asm_submitter: Agriculture and Agri-Food Canada

organism_name: Yersinia bercovieri


organism_name: Pseudomonas paraglycinae


organism_name: Pseudomonas putida


organism_name: Rahnella aceris


organism_name: Pseudomonas pharyngis


organism_name: Enterobacter ludwigii


organism_name: Pantoea agglomerans


organism_name: Duffyella gerundensis


organism_name: Pseudomonas parakoreensis


asm_submitter: University of Veterinary Medicine Vienna

organism_name: Klebsiella pneumoniae


asm_submitter: RIKEN

group: archaea

organism_name: Cuniculiplasma thermophilum

relation_to_type_material: assembly from type material


refseq_category: reference genome


organism_name: Caldiplasma sukawensis


asm_submitter: Universidade Federal do Rio de Janeiro

organism_name: Streptococcus dysgalactiae subsp. equisimilis


asm_submitter: Santa Clara University

organism_name: Citrobacter koseri


asm_submitter: University of Liege

organism_name: Aeromonas salmonicida subsp. salmonicida


asm_submitter: National Vererinary Research Intitute

organism_name: Ornithobacterium rhinotracheale


asm_submitter: National Institute of Biotechnology

organism_name: Escherichia coli


asm_submitter: National Institute of Health, Department of Medical Sciences


asm_submitter: Niallia genome

organism_name: Niallia sp. 01092


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar London


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Rissen


organism_name: Salmonella enterica subsp. enterica serovar Berta


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Brandenburg


asm_submitter: CDC

organism_name: Shigella flexneri


organism_name: Shigella sonnei


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter upsaliensis


organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


asm_submitter: National Center for Biotechnology Information

organism_name: Streptococcus pyogenes


organism_name: Enterobacter hormaechei


organism_name: Klebsiella pneumoniae


asm_submitter: Guangdong Institute Of Microbiology

organism_name: Sphingomonas cellulosilytica


asm_submitter: Bellevue University

infraspecific_name: strain=NSM

organism_name: Oceanimonas smirnovii


organism_name: Pseudomonas aeruginosa


asm_submitter: Federal University of Paraiba

infraspecific_name: strain=ICBKPJB


organism_name: Escherichia coli


asm_submitter: Public Health England


asm_submitter: Noakhali Science and Technology University

organism_name: Proteus mirabilis


asm_submitter: Shandong Agriculture University

assembly_level: Complete Genome

organism_name: Glutamicibacter soli


organism_name: Acinetobacter baumannii


asm_submitter: Health Protection Agency


organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Salmonella enterica subsp. enterica serovar Newport


asm_submitter: Dr. Panjwani Center for Molecular Medicine and Drug Research, ICCBS, University of Karachi

assembly_level: Chromosome

organism_name: Enterococcus faecium


asm_submitter: Universiti Malaya

organism_name: Pseudomonas protegens


asm_submitter: UIUC

organism_name: Candidatus Limisoma sp.


asm_submitter: LMU Munich

organism_name: Pseudomonas monachiensis


asm_submitter: China CDC

organism_name: Sanguibacter sp. A246


asm_submitter: Institute of Medical Sciences


organism_name: Sanguibacter sp. A247


asm_submitter: First Affiliated Hospital of Medicine School, Zhejiang University

organism_name: Streptococcus pneumoniae


asm_submitter: National Institute of Biotechnology


asm_submitter: Nottingham Trent University

organism_name: Pseudomonas vlassakiae


asm_submitter: The University of Wisconsin-Madison

organism_name: Methanoregula sp.


organism_name: Beijerinckiaceae bacterium


organism_name: Acidobacteriaceae bacterium


organism_name: Desulfomonilaceae bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome


organism_name: Rhodoblastus sp.


organism_name: Syntrophobacteraceae bacterium


organism_name: Occallatibacter sp.


organism_name: Methylovirgula sp.


organism_name: Bryobacteraceae bacterium


organism_name: Steroidobacteraceae bacterium


organism_name: Solirubrobacteraceae bacterium


organism_name: Methanobacterium sp.


organism_name: Bacteroidia bacterium


organism_name: Limisphaerales bacterium


organism_name: Acidimicrobiales bacterium


organism_name: Candidatus Dormibacteria bacterium


organism_name: Thermoplasmata archaeon


organism_name: Methanoregula sp.


organism_name: Candidatus Acidiferrales bacterium


organism_name: Candidatus Cybelea sp.


organism_name: Desulfobaccales bacterium


organism_name: Terriglobales bacterium


organism_name: Nitrososphaerales archaeon


organism_name: Halobacteriota archaeon


organism_name: Smithella sp.


organism_name: Occallatibacter sp.


organism_name: Steroidobacteraceae bacterium


organism_name: Candidatus Sulfotelmatobacter sp.


organism_name: Xanthobacteraceae bacterium


organism_name: Candidatus Bathyarchaeia archaeon


organism_name: Limisphaerales bacterium


organism_name: Acidimicrobiales bacterium


organism_name: Rhodoblastus sp.


organism_name: Dehalococcoidales bacterium


organism_name: Thermoplasmata archaeon


organism_name: Syntrophobacteraceae bacterium


organism_name: Methanoregula sp.


asm_submitter: Capital institution of Pediatrics

organism_name: Escherichia coli


organism_name: Acidocella sp.


asm_submitter: Hunan Agricultural University

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Pasteurella multocida


organism_name: Desulfobaccales bacterium


organism_name: Streptosporangiaceae bacterium


organism_name: Methanobacterium sp.


organism_name: Smithella sp.


organism_name: Halobacteriota archaeon


asm_submitter: National Institute of Health, Department of Medical Sciences

organism_name: Pseudomonas aeruginosa


asm_submitter: Beijing Academy of Agriculture and Forestry Sciences

organism_name: Sphingobium sp. CR28


asm_submitter: Nakdonggang National Institute of Biological Resources

organism_name: Asticcacaulis solisilvae


asm_submitter: Prince of Songkla University

organism_name: Wolbachia endosymbiont of Zeugodacus apicalis


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


organism_name: Proteus mirabilis


organism_name: Citrobacter amalonaticus


asm_submitter: CDC

organism_name: Vibrio cholerae


organism_name: Bacilli bacterium


organism_name: Klebsiella pneumoniae


organism_name: Roseburia faecis


organism_name: Prevotella sp.


organism_name: Escherichia coli


organism_name: Alloprevotella sp.


organism_name: Salmonella enterica subsp. enterica serovar Kiambu


organism_name: Treponema succinifaciens


asm_submitter: FDA


organism_name: Dialister sp.


organism_name: Succinivibrio sp.


organism_name: Candidatus Fimenecus sp.


organism_name: Segatella hominis


organism_name: Megasphaera elsdenii


organism_name: Pseudomonas aeruginosa


asm_submitter: University of Bern

organism_name: Clostridium perfringens


organism_name: Mitsuokella multacida


organism_name: Acutalibacteraceae bacterium


organism_name: Megamonas funiformis


organism_name: Klebsiella pneumoniae


organism_name: Phocaeicola plebeius


organism_name: Leyella stercorea


organism_name: Prevotella sp.


organism_name: Escherichia coli


asm_submitter: Michigan Department of Health and Human Services

organism_name: Listeria monocytogenes


organism_name: Phocaeicola dorei


organism_name: Bacteroides uniformis


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; genome length too small

organism_name: Alistipes putredinis


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


organism_name: Bacteroides ovatus


organism_name: Acinetobacter baumannii


organism_name: Phocaeicola vulgatus


organism_name: Pseudomonas aeruginosa


organism_name: Dialister succinatiphilus


organism_name: Elusimicrobiaceae bacterium


organism_name: Bacilli bacterium


organism_name: Candidatus Limisoma sp.


organism_name: Segatella copri


organism_name: Alloprevotella sp.


organism_name: Agathobacter rectalis


organism_name: Ruminococcus bromii


organism_name: Candidatus Fimenecus sp.


organism_name: Prevotella sp.


organism_name: Escherichia coli


organism_name: Shigella sonnei


organism_name: Megasphaera sp.


organism_name: Dialister hominis


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small


organism_name: Eubacterium sp.


asm_submitter: FDA/CFSAN

organism_name: Cronobacter sakazakii


organism_name: Faecalibacterium prausnitzii


organism_name: Bifidobacterium adolescentis


organism_name: Alistipes indistinctus


organism_name: Cronobacter dublinensis


organism_name: Salmonella enterica subsp. enterica serovar Kiambu


organism_name: Acinetobacter baumannii


organism_name: Christensenellales bacterium


organism_name: Akkermansia muciniphila


organism_name: Phocaeicola plebeius


organism_name: Candidatus Limisoma sp.


organism_name: Ruminococcus bromii


organism_name: Roseburia inulinivorans


organism_name: Escherichia coli


organism_name: Phocaeicola vulgatus


excluded_from_refseq: annotation fails completeness check; derived from metagenome

organism_name: Klebsiella pneumoniae


organism_name: Eisenbergiella sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genome length too small


organism_name: Campylobacter coli


asm_submitter: National Center for Biotechnology Information

organism_name: Streptococcus pyogenes


organism_name: Bacilli bacterium


organism_name: Prevotella sp.


organism_name: Megasphaera sp.


organism_name: Legionella pneumophila


organism_name: Neisseria meningitidis


organism_name: Bacteroides xylanisolvens


organism_name: Eubacterium sp.


organism_name: Neisseria gonorrhoeae


organism_name: Dialister sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Roseburia faecis


organism_name: Acutalibacteraceae bacterium


organism_name: Acinetobacter baumannii


organism_name: Akkermansia muciniphila


organism_name: Escherichia coli


organism_name: Oscillospiraceae bacterium


organism_name: Campylobacter coli


organism_name: Mitsuokella multacida


organism_name: Dialister hominis


organism_name: Clostridia bacterium


organism_name: Angelakisella sp.


organism_name: Phascolarctobacterium sp.


organism_name: Megamonas funiformis


organism_name: Alistipes putredinis


organism_name: Shigella flexneri


organism_name: Paraprevotella clara


organism_name: Phocaeicola dorei


organism_name: Lachnospira eligens


organism_name: Agathobacter rectalis


organism_name: Segatella copri


organism_name: Waltera intestinalis


organism_name: Escherichia coli


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni subsp. jejuni


organism_name: Oscillospiraceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Eubacterium sp.


organism_name: Bacilli bacterium


organism_name: Candidatus Limivicinus sp.


organism_name: Faecalibacillus intestinalis


organism_name: Dorea longicatena


organism_name: Megasphaera elsdenii


organism_name: Clostridia bacterium


organism_name: Shigella flexneri


organism_name: Holdemanella porci


organism_name: Eubacterium ventriosum


organism_name: Shigella sonnei


organism_name: Mitsuokella multacida


organism_name: Dialister sp.


organism_name: Escherichia coli


organism_name: Phascolarctobacterium sp.


organism_name: Bifidobacterium adolescentis


organism_name: Faecalibacterium prausnitzii


organism_name: Bacteroides uniformis


organism_name: Alistipes putredinis


organism_name: Bifidobacterium longum


organism_name: Roseburia faecis


organism_name: Streptococcus pyogenes


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Megasphaera micronuciformis


organism_name: Dialister invisus


organism_name: Shigella flexneri


organism_name: Blautia wexlerae


organism_name: [Lactobacillus] rogosae


organism_name: Anaerobutyricum soehngenii


organism_name: Alistipes communis


organism_name: Escherichia coli


organism_name: Thomasclavelia ramosa


organism_name: Blautia sp.


organism_name: Streptococcus salivarius


organism_name: Shigella sonnei


organism_name: Parabacteroides distasonis


organism_name: Fusicatenibacter saccharivorans


organism_name: Parabacteroides merdae


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Bacteroides eggerthii


organism_name: Ruminococcus bromii


organism_name: Eggerthella lenta


organism_name: Faecalibacterium prausnitzii


organism_name: Acetatifactor sp.


organism_name: Anaerostipes hadrus


organism_name: [Ruminococcus] lactaris


organism_name: Bacteroidaceae bacterium


organism_name: Bacilli bacterium


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Candidatus Cryptobacteroides bacterium


organism_name: Monoglobaceae bacterium


organism_name: Dialister sp.


organism_name: Salmonella enterica subsp. enterica serovar Muenster


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Clostridia bacterium


organism_name: Alloprevotella sp.


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Methanobrevibacter smithii


organism_name: Angelakisella sp.


organism_name: Duodenibacillus sp.


organism_name: Salmonella enterica subsp. enterica serovar Thompson


organism_name: Brachyspira aalborgi


organism_name: Candidatus Aphodocola sp.


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Escherichia coli


organism_name: Prevotella sp.


organism_name: [Eubacterium] siraeum


organism_name: Fusicatenibacter saccharivorans


organism_name: Catenibacterium sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Succinivibrio sp.


organism_name: Collinsella sp.


organism_name: Phascolarctobacterium succinatutens


organism_name: Phocaeicola vulgatus


excluded_from_refseq: contaminated; derived from metagenome; genome length too small

organism_name: Ruminococcus bromii


organism_name: Oscillospiraceae bacterium


organism_name: Sutterella wadsworthensis


organism_name: Roseburia inulinivorans


organism_name: Faecalibacterium prausnitzii


organism_name: Bacteroides uniformis


organism_name: [Lactobacillus] rogosae


organism_name: Escherichia coli


organism_name: Bifidobacterium longum


asm_submitter: Public Health England

organism_name: Yersinia enterocolitica


organism_name: Holdemanella porci


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


organism_name: Ruminococcus sp.


organism_name: Agathobacter rectalis


organism_name: Salmonella enterica subsp. enterica serovar Newport


asm_submitter: Health Protection Agency


organism_name: Lachnospira eligens


organism_name: Catenibacterium sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Acetatifactor sp.


organism_name: Shigella sonnei


excluded_from_refseq: contaminated; from large multi-isolate project


organism_name: Segatella copri


organism_name: Lachnospirales bacterium


organism_name: Eubacterium sp.


organism_name: Shigella flexneri


organism_name: Eggerthellaceae bacterium


organism_name: Alistipes putredinis


organism_name: Dialister hominis


organism_name: Collinsella sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Klebsiella pneumoniae


organism_name: Bifidobacterium adolescentis


organism_name: Coprococcus sp.


organism_name: Christensenellales bacterium


organism_name: Fusicatenibacter saccharivorans


organism_name: Gemmiger qucibialis


asm_submitter: FDA Center for Food Safety and Applied Nutrition

organism_name: Escherichia coli


organism_name: Bacteroides uniformis


organism_name: Roseburia faecis


organism_name: Clostridia bacterium


organism_name: Agathobaculum butyriciproducens


organism_name: Pseudomonas aeruginosa


organism_name: Butyribacter sp.


organism_name: Blautia wexlerae


organism_name: Coprococcus eutactus


organism_name: Gemmiger sp.


organism_name: Candidatus Fimenecus sp.


organism_name: Agathobacter rectalis


organism_name: Shigella sonnei


organism_name: Salmonella enterica


organism_name: Faecousia sp.


organism_name: Segatella copri


organism_name: Lachnospira eligens


organism_name: Dialister hominis


organism_name: Christensenellales bacterium


organism_name: Anaeroplasmataceae bacterium


organism_name: Escherichia coli


organism_name: Roseburia faecis


organism_name: Candidatus Merdousia sp.


organism_name: Eshraghiella crossota


organism_name: Cronobacter turicensis


organism_name: Parabacteroides distasonis


organism_name: Lachnospiraceae bacterium


organism_name: Catenibacterium mitsuokai


organism_name: Candidatus Limivicinus sp.


organism_name: Oscillospiraceae bacterium


organism_name: Salmonella enterica


organism_name: Muribaculaceae bacterium


organism_name: Prevotella sp.


organism_name: [Lactobacillus] rogosae


organism_name: Faecousia sp.


organism_name: Shigella sonnei


organism_name: Vibrio vulnificus


organism_name: Escherichia coli


organism_name: Lachnospira sp.


organism_name: Shigella flexneri


organism_name: Acinetobacter baumannii


organism_name: Candidatus Cryptobacteroides bacterium


organism_name: Methanobrevibacter smithii


organism_name: Acutalibacteraceae bacterium


organism_name: Ruminococcus sp.


organism_name: Bifidobacterium adolescentis


organism_name: Serratia marcescens


organism_name: Phocaeicola coprocola


organism_name: Paraprevotella clara


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Coprococcus eutactus


organism_name: Lachnospiraceae bacterium


organism_name: Klebsiella pneumoniae


organism_name: Campylobacter jejuni


organism_name: Christensenellales bacterium


organism_name: Citrobacter freundii


excluded_from_refseq: derived from metagenome

organism_name: Candidatus Ventrenecus sp.


organism_name: Ruminococcus bromii


organism_name: Escherichia coli


organism_name: Bacilli bacterium


excluded_from_refseq: annotation fails completeness check; derived from metagenome; genome length too small

organism_name: Faecalibacterium prausnitzii


organism_name: Pseudomonas aeruginosa


organism_name: Ruminococcus sp.


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Angelakisella sp.


organism_name: Oscillospiraceae bacterium


organism_name: Prevotella sp.


organism_name: Shigella sonnei


organism_name: Agathobacter rectalis


organism_name: [Eubacterium] siraeum


asm_submitter: USDA FSIS


organism_name: Eubacterium sp.


organism_name: Bacteroides eggerthii


organism_name: Candidatus Onthocola sp.


organism_name: Campylobacter coli


organism_name: Candidatus Limisoma sp.


organism_name: Muribaculaceae bacterium


organism_name: Eshraghiella crossota


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Roseburia sp.


organism_name: Holdemanella porci


organism_name: Segatella copri


organism_name: Lachnospira sp.


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Catenibacterium mitsuokai


organism_name: Roseburia hominis


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Phocaeicola plebeius


organism_name: Campylobacter jejuni


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Bacilli bacterium


organism_name: Xylanibacter rarus


organism_name: Alloprevotella sp.


organism_name: Campylobacter upsaliensis


organism_name: Phascolarctobacterium succinatutens


organism_name: Candidatus Fimenecus sp.


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Waltera intestinalis


excluded_from_refseq: from large multi-isolate project

organism_name: Campylobacter coli


organism_name: Phascolarctobacterium faecium


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Eubacteriales bacterium


organism_name: Bacteroides intestinalis


organism_name: Oscillospiraceae bacterium


organism_name: Anaerobutyricum hallii


organism_name: Anaerostipes hadrus


organism_name: Collinsella aerofaciens


organism_name: Muribaculaceae bacterium


organism_name: Campylobacter jejuni


organism_name: Clostridia bacterium


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome

organism_name: Alistipes putredinis


organism_name: Candidatus Merdicola sp.


organism_name: Listeria monocytogenes


organism_name: Agathobacter rectalis


organism_name: Parabacteroides distasonis


organism_name: Ellagibacter isourolithinifaciens


organism_name: Legionella pneumophila


organism_name: Acinetobacter baumannii


organism_name: Ruminococcus sp.


organism_name: Christensenellales bacterium


organism_name: Akkermansia muciniphila


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Barnesiella intestinihominis


organism_name: Escherichia coli


organism_name: Eubacteriales bacterium


excluded_from_refseq: derived from metagenome; genome length too small; genus undefined

organism_name: [Eubacterium] siraeum


organism_name: Candidatus Fimenecus sp.


organism_name: Lachnospira sp.


organism_name: Acidaminococcaceae bacterium


organism_name: Collinsella sp.


organism_name: Oscillospiraceae bacterium


organism_name: Candidatus Fimivicinus sp.


organism_name: Faecalibacillus intestinalis


organism_name: Bacteroides eggerthii


organism_name: [Lactobacillus] rogosae


excluded_from_refseq: annotation fails completeness check; derived from metagenome

organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Coprococcus sp.


organism_name: Alistipes ihumii


organism_name: Bacteroides uniformis


organism_name: Christensenellaceae bacterium


organism_name: Escherichia coli


organism_name: Alistipes putredinis


organism_name: Faecousia sp.


organism_name: Ruminococcus bromii


organism_name: Clostridia bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small


organism_name: Eubacterium sp.


organism_name: Ruthenibacterium lactatiformans


organism_name: Oscillospiraceae bacterium


organism_name: Eubacteriales bacterium


organism_name: Lachnospira eligens


organism_name: Acutalibacteraceae bacterium


organism_name: Christensenellales bacterium


organism_name: Segatella copri


organism_name: Methanobrevibacter smithii


organism_name: Bacilli bacterium


organism_name: Parabacteroides merdae


organism_name: Bifidobacterium adolescentis


organism_name: Escherichia coli


organism_name: Collinsella sp.


organism_name: Vibrio parahaemolyticus


organism_name: Parabacteroides distasonis


organism_name: Blautia sp.


organism_name: Akkermansia sp.


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Lachnospiraceae bacterium


organism_name: Dialister sp.


organism_name: Agathobacter rectalis


organism_name: Oscillospiraceae bacterium


organism_name: Shigella boydii


organism_name: Lachnospira eligens


organism_name: Christensenellales bacterium


organism_name: Holdemanella porci


organism_name: Barnesiella intestinihominis


organism_name: Bacteroides uniformis


organism_name: Escherichia coli


organism_name: Bacilli bacterium


organism_name: Phocaeicola vulgatus


organism_name: Vibrio parahaemolyticus


organism_name: Butyribacter sp.


organism_name: Eubacterium sp.


organism_name: Clostridia bacterium


organism_name: Phocaeicola coprocola


organism_name: Faecalibacillus intestinalis


organism_name: Faecousia sp.


organism_name: Odoribacter splanchnicus


organism_name: Shigella sonnei


organism_name: [Bacteroides] pectinophilus


organism_name: Akkermansia muciniphila


organism_name: Shigella flexneri


organism_name: Barnesiella intestinihominis


organism_name: Campylobacter jejuni


organism_name: Coprococcus sp.


asm_submitter: Chung-Ang university

organism_name: Pedobacter terrestris


asm_submitter: Huashan Hospital, Fudan University

organism_name: Streptococcus agalactiae


organism_name: Campylobacter coli


organism_name: Dialister invisus


organism_name: Escherichia coli


organism_name: Pseudoruminococcus massiliensis


organism_name: Clostridia bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Coprococcus eutactus


organism_name: Duncaniella sp.


organism_name: Providencia rettgeri


organism_name: Legionella pneumophila


organism_name: Alistipes inops


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Agathobacter rectalis


organism_name: Alistipes putredinis


organism_name: Acutalibacteraceae bacterium


organism_name: Campylobacter jejuni


organism_name: Ruminococcus bromii


organism_name: Streptococcus agalactiae


organism_name: Angelakisella sp.


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Bacilli bacterium


organism_name: Christensenellales bacterium


organism_name: Escherichia coli


organism_name: Prevotella sp.


organism_name: Alistipes indistinctus


organism_name: Oscillospiraceae bacterium


organism_name: Pedobacter paludisoli


organism_name: Methanobrevibacter smithii


organism_name: Collinsella sp.


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Shigella flexneri


organism_name: Dialister sp.


organism_name: Campylobacter jejuni


organism_name: Faecousia sp.


organism_name: Bacteroides uniformis


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; genome length too small

organism_name: Butyricimonas faecihominis


organism_name: Bacteroidales bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Listeria monocytogenes


organism_name: Bacteroides cellulosilyticus


organism_name: Parabacteroides distasonis


organism_name: Sutterella wadsworthensis


organism_name: Mediterraneibacter torques


organism_name: Oxalobacter sp.


organism_name: Faecalibacterium sp.


organism_name: Odoribacter splanchnicus


organism_name: Alphaproteobacteria bacterium


organism_name: Anaerostipes hadrus


organism_name: Parasutterella excrementihominis


organism_name: Phocaeicola dorei


organism_name: Gemmiger sp.


organism_name: Alistipes onderdonkii


organism_name: Acutalibacteraceae bacterium


organism_name: Bacteroides uniformis


organism_name: Parabacteroides sp.


organism_name: Collinsella aerofaciens


organism_name: Lawsonibacter sp.


organism_name: Dysosmobacter welbionis


organism_name: Fusicatenibacter saccharivorans


organism_name: Alistipes shahii


organism_name: Dorea sp.


organism_name: Mediterraneibacter gnavus


organism_name: Blautia sp.


organism_name: Lachnospira eligens


organism_name: Megasphaera massiliensis


organism_name: Phocaeicola vulgatus


organism_name: Parabacteroides merdae


organism_name: [Lactobacillus] rogosae


organism_name: Roseburia hominis


organism_name: Blautia wexlerae


organism_name: Odoribacter splanchnicus


organism_name: Fusobacterium ulcerans


organism_name: Alistipes onderdonkii


organism_name: Allofournierella massiliensis


organism_name: Parasutterella excrementihominis


organism_name: Lachnospiraceae bacterium


organism_name: Mediterraneibacter torques


organism_name: Faecalibacterium sp.


organism_name: Flavonifractor plautii


organism_name: Phocaeicola massiliensis


organism_name: Bacteroidales bacterium


organism_name: Phocaeicola plebeius


organism_name: Bacteroides uniformis


organism_name: Phocaeicola coprocola


organism_name: Alistipes putredinis


organism_name: Agathobacter rectalis


organism_name: Sutterella wadsworthensis


organism_name: Candidatus Limisoma sp.


organism_name: Phascolarctobacterium faecium


organism_name: Faecalibacterium prausnitzii


organism_name: Bacteroides stercoris


organism_name: Parabacteroides merdae


organism_name: Oscillospiraceae bacterium


organism_name: Odoribacter splanchnicus


organism_name: Lachnospiraceae bacterium


organism_name: Roseburia inulinivorans


organism_name: Lachnospira sp.


organism_name: Parabacteroides distasonis


organism_name: Fusicatenibacter saccharivorans


organism_name: Holdemanella biformis


organism_name: Candidatus Fimivicinus sp.


organism_name: Eubacterium ramulus


organism_name: Clostridia bacterium


organism_name: Bacteroides uniformis


organism_name: Collinsella sp.


organism_name: Phocaeicola vulgatus


organism_name: Faecalibacterium sp.


organism_name: Megasphaera elsdenii


organism_name: Parabacteroides merdae


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Megamonas funiformis


organism_name: Dorea longicatena


organism_name: Alistipes onderdonkii


organism_name: Bacteroides stercoris


organism_name: Bifidobacterium longum


organism_name: Mediterraneibacter torques


organism_name: Bacteroides fragilis


organism_name: Ruthenibacterium lactatiformans


organism_name: Blautia sp.


organism_name: Bacteroides caccae


organism_name: Odoribacter splanchnicus


organism_name: Alistipes putredinis


organism_name: Lachnospiraceae bacterium


organism_name: Agathobacter rectalis


organism_name: Lachnospira sp.


organism_name: Parasutterella excrementihominis


organism_name: Collinsella sp.


organism_name: Lachnospirales bacterium


organism_name: Enterocloster sp.


organism_name: Anaerostipes hadrus


organism_name: Bacteroides ovatus


organism_name: Flavonifractor plautii


organism_name: Faecalibacterium prausnitzii


organism_name: Parabacteroides distasonis


organism_name: Candidatus Fimivicinus sp.


organism_name: Eubacteriales bacterium


organism_name: Ventrimonas sp.


organism_name: Alistipes onderdonkii


organism_name: Phocaeicola vulgatus


organism_name: Ruthenibacterium lactatiformans


organism_name: Mediterraneibacter torques


organism_name: Clostridium sp.


organism_name: Odoribacter splanchnicus


organism_name: Alistipes putredinis


organism_name: Lachnospiraceae bacterium


organism_name: Candidatus Borkfalkia sp.


organism_name: Desulfovibrio sp.


organism_name: Sutterella wadsworthensis


organism_name: Angelakisella sp.


organism_name: Christensenellales bacterium


organism_name: Christensenellaceae bacterium


organism_name: Faecalibacterium prausnitzii


organism_name: [Eubacterium] siraeum


organism_name: Phocaeicola dorei


organism_name: Candidatus Fimenecus sp.


organism_name: Prevotella sp.


organism_name: Bacteroides uniformis


organism_name: Alloprevotella sp.


organism_name: Dialister invisus


organism_name: Lachnospira eligens


organism_name: Blautia wexlerae


organism_name: Parabacteroides distasonis


organism_name: Segatella copri


organism_name: Faecalibacterium sp.


organism_name: Anaerotignum faecicola


organism_name: Lachnospiraceae bacterium


organism_name: Pilosibacter sp.


organism_name: Christensenellales bacterium


organism_name: Oscillospiraceae bacterium


organism_name: [Eubacterium] siraeum


organism_name: Ruminococcus bromii


organism_name: Candidatus Fimenecus sp.


organism_name: Duodenibacillus sp.


organism_name: Candidatus Borkfalkia sp.


organism_name: Sutterella wadsworthensis


organism_name: Bifidobacterium adolescentis


organism_name: Prevotella sp.


organism_name: Clostridia bacterium


organism_name: Collinsella sp.


organism_name: Bacilli bacterium


organism_name: Angelakisella sp.


organism_name: Gemmiger sp.


organism_name: Mitsuokella multacida


organism_name: Anaerostipes sp.


organism_name: Christensenellales bacterium


organism_name: Intestinimonas butyriciproducens


organism_name: Dialister invisus


organism_name: Eubacterium sp.


organism_name: Lachnospiraceae bacterium


organism_name: Anaerotignum faecicola


organism_name: Oscillospiraceae bacterium


organism_name: Paraprevotella clara


organism_name: Faecalibacterium prausnitzii


organism_name: Barnesiella intestinihominis


organism_name: Mediterraneibacter torques


organism_name: Parabacteroides distasonis


organism_name: Coprococcus sp.


organism_name: Phascolarctobacterium faecium


organism_name: Candidatus Fimenecus sp.


organism_name: Alistipes ihumii


organism_name: Odoribacter splanchnicus


organism_name: Bacteroides clarus


organism_name: Escherichia coli


organism_name: Hungatella sp.


organism_name: Eisenbergiella tayi


organism_name: Alistipes putredinis


organism_name: Sutterella wadsworthensis


organism_name: Bacteroides uniformis


organism_name: Collinsella sp.


organism_name: Desulfovibrio sp.


organism_name: Odoribacter laneus


organism_name: Bacteroides caccae


organism_name: Barnesiella intestinihominis


organism_name: Oscillospiraceae bacterium


organism_name: Ruminococcus sp.


organism_name: Lachnospiraceae bacterium


organism_name: Faecalibacterium prausnitzii


organism_name: Clostridium fessum


organism_name: [Eubacterium] siraeum


organism_name: Agathobacter rectalis


organism_name: Eubacterium sp.


organism_name: Segatella copri


organism_name: Fusicatenibacter saccharivorans


organism_name: Sutterella wadsworthensis


organism_name: Paraprevotella clara


organism_name: Gemmiger qucibialis


organism_name: Mediterraneibacter torques


organism_name: Lachnospira sp.


organism_name: Bacteroides caccae


organism_name: Coprococcus sp.


organism_name: Parabacteroides distasonis


organism_name: Ruminococcus sp.


organism_name: Phascolarctobacterium faecium


organism_name: Collinsella sp.


organism_name: Clostridia bacterium


organism_name: Butyricimonas faecalis


organism_name: Parabacteroides merdae


organism_name: Lachnospiraceae bacterium


organism_name: Alistipes putredinis


organism_name: Anaerobutyricum hallii


organism_name: Phocaeicola vulgatus


organism_name: Faecalibacterium prausnitzii


organism_name: Odoribacter splanchnicus


organism_name: Oscillospiraceae bacterium


organism_name: Anaerostipes hadrus


organism_name: [Ruminococcus] lactaris


organism_name: Mediterraneibacter gnavus


organism_name: Acutalibacteraceae bacterium


organism_name: Parabacteroides distasonis


organism_name: Anaerotignum faecicola


organism_name: Paraprevotella clara


organism_name: Gemmiger formicilis


organism_name: Lachnospira eligens


organism_name: Phascolarctobacterium faecium


organism_name: [Lactobacillus] rogosae


organism_name: Bacteroides eggerthii


organism_name: Alistipes onderdonkii


organism_name: Fusobacterium mortiferum


organism_name: Bacteroides fragilis


organism_name: Alistipes putredinis


organism_name: Bilophila wadsworthia


organism_name: Sutterella seckii


organism_name: Phocaeicola vulgatus


organism_name: Oscillospiraceae bacterium


organism_name: Bacteroides stercoris


organism_name: Bacteroides uniformis


organism_name: Faecalibacterium sp.


organism_name: Parabacteroides merdae


organism_name: Agathobacter rectalis


organism_name: Parabacteroides distasonis


organism_name: Prevotella sp.


organism_name: Dialister sp.


organism_name: Succinivibrio sp.


organism_name: Phocaeicola sp.


organism_name: Megasphaera sp.


organism_name: Roseburia inulinivorans


organism_name: Segatella copri


organism_name: Alloprevotella sp.


organism_name: Dialister hominis


organism_name: Prevotellaceae bacterium


organism_name: Prevotellamassilia timonensis


organism_name: Lachnospiraceae bacterium


organism_name: Phocaeicola coprocola


organism_name: Alistipes putredinis


organism_name: Phocaeicola plebeius


organism_name: Candidatus Limisoma sp.


organism_name: Alistipes finegoldii


organism_name: Bacilli bacterium


organism_name: Prevotella sp.


organism_name: Agathobacter rectalis


organism_name: Leyella stercorea


organism_name: [Bacteroides] pectinophilus


organism_name: Agathobacter sp.


organism_name: Dialister sp.


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; genome length too small


organism_name: Bacteroides xylanisolvens


organism_name: Alloprevotella sp.


organism_name: Dialister succinatiphilus


organism_name: Megasphaera sp.


organism_name: Prevotellaceae bacterium


organism_name: Prevotellamassilia timonensis


organism_name: Clostridia bacterium


organism_name: Dialister hominis


organism_name: Oscillospiraceae bacterium


organism_name: Roseburia inulinivorans


organism_name: Akkermansia muciniphila


organism_name: Gemmiger qucibialis


organism_name: Faecalibacterium prausnitzii


organism_name: Phocaeicola vulgatus


organism_name: Lachnospiraceae bacterium


organism_name: Succinivibrio sp.


organism_name: Segatella hominis


organism_name: Agathobacter rectalis


organism_name: Phocaeicola plebeius


organism_name: [Lactobacillus] rogosae


organism_name: Bacilli bacterium


organism_name: Alistipes putredinis


organism_name: Prevotellaceae bacterium


organism_name: Lachnospira sp.


organism_name: Prevotella sp.


organism_name: Dialister succinatiphilus


organism_name: Elusimicrobiaceae bacterium


organism_name: Candidatus Limisoma sp.


organism_name: Candidatus Cryptobacteroides bacterium


organism_name: Eubacterium sp.


organism_name: Ruminococcus sp.


organism_name: Segatella copri


organism_name: Lachnospiraceae bacterium


organism_name: Oscillospiraceae bacterium


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Ruminococcus bromii


organism_name: Alloprevotella sp.


organism_name: Candidatus Stercorousia sp.


organism_name: Sutterella wadsworthensis


organism_name: Roseburia inulinivorans


organism_name: Phocaeicola dorei


organism_name: Prevotellaceae bacterium


organism_name: Faecalibacterium prausnitzii


organism_name: Lachnospira eligens


organism_name: Coprococcus sp.


organism_name: Eshraghiella crossota


organism_name: Bacilli bacterium


organism_name: Eubacteriales bacterium


organism_name: Agathobacter sp.


organism_name: Segatella copri


organism_name: Agathobacter rectalis


organism_name: Prevotella sp.


asm_submitter: KRIBB

organism_name: Streptomyces inhibens


asm_submitter: French National Institute for Agriculture, Food, and Environment (INRAE)

organism_name: Halomonas sp. AOP7-C1-8


organism_name: Halomonas sp. AOP7-B1-5


excluded_from_refseq: contaminated

organism_name: Vreelandella zhanjiangensis


asm_submitter: Chinese Academy of Sciences

organism_name: Vibrio sp. YIC-376


organism_name: Candidatus Cryptobacteroides bacterium


organism_name: Dialister sp.


excluded_from_refseq: derived from metagenome


organism_name: Roseburia faecis


organism_name: Oscillospiraceae bacterium


organism_name: Christensenellales bacterium


organism_name: Clostridia bacterium


organism_name: Acutalibacteraceae bacterium


organism_name: Lachnospiraceae bacterium


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genome length too small

organism_name: Ruminococcus bromii


organism_name: Segatella hominis


organism_name: Succinivibrio sp.


organism_name: Prevotellaceae bacterium


organism_name: Prevotella sp.


organism_name: Alloprevotella sp.


organism_name: Agathobacter rectalis


organism_name: Alistipes putredinis


organism_name: Megasphaera sp.


organism_name: Bacilli bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Dialister succinatiphilus


organism_name: Lachnospira sp.


organism_name: Bacteroides uniformis


organism_name: Bacteroides ovatus


organism_name: Phocaeicola sp.


organism_name: Oscillospiraceae bacterium


organism_name: Collinsella sp.


organism_name: Bacteroides sp.


organism_name: Ruminococcus sp.


organism_name: Lachnospira eligens


organism_name: Veillonella parvula


organism_name: Faecalibacterium sp.


organism_name: Prevotella sp.


organism_name: Mitsuokella multacida


organism_name: Prevotellaceae bacterium


organism_name: Dialister hominis


organism_name: Acutalibacteraceae bacterium


organism_name: Bacilli bacterium


organism_name: Dialister succinatiphilus


organism_name: Megasphaera sp.


organism_name: Dongibacter bovis


organism_name: Bacteroides uniformis


organism_name: Phocaeicola vulgatus


organism_name: Escherichia coli


organism_name: Bacteroides fragilis


organism_name: Faecalibacterium prausnitzii


organism_name: Segatella hominis


excluded_from_refseq: derived from metagenome; genome length too small


organism_name: Prevotellamassilia timonensis


organism_name: Collinsella aerofaciens


organism_name: Ruminococcus sp.


organism_name: Eubacterium sp.


organism_name: Leyella stercorea


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Prevotellaceae bacterium


organism_name: Agathobacter rectalis


organism_name: Catenibacterium sp.


organism_name: Alistipes putredinis


organism_name: Dialister sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Gemmiger qucibialis


excluded_from_refseq: contaminated; annotation fails completeness check; derived from metagenome; genome length too small

organism_name: Ruminococcus bromii


organism_name: Phocaeicola dorei


organism_name: Klebsiella quasipneumoniae


organism_name: Phocaeicola vulgatus


organism_name: Elusimicrobiaceae bacterium


organism_name: Candidatus Limisoma sp.


organism_name: Dialister succinatiphilus


organism_name: Bacilli bacterium


organism_name: Dialister hominis


organism_name: Bifidobacterium sp.


organism_name: Veillonella magna


organism_name: Akkermansia muciniphila


organism_name: Roseburia inulinivorans


organism_name: Megasphaera sp.


organism_name: Dialister sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Agathobacter rectalis


organism_name: Segatella copri


organism_name: Lachnospiraceae bacterium


organism_name: Prevotellaceae bacterium


organism_name: Candidatus Cryptobacteroides bacterium


organism_name: Phocaeicola plebeius


organism_name: Prevotella sp.


organism_name: Prevotellamassilia timonensis


organism_name: Bacilli bacterium


organism_name: Candidatus Ventrenecus sp.


organism_name: Mitsuokella multacida


organism_name: Collinsella sp.


organism_name: Candidatus Limisoma sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Alistipes indistinctus


organism_name: Oscillospiraceae bacterium


organism_name: Dialister succinatiphilus


organism_name: Megasphaera elsdenii


excluded_from_refseq: annotation fails completeness check; derived from metagenome; genome length too small

organism_name: Leyella stercorea


organism_name: Alloprevotella sp.


organism_name: Lachnospira eligens


organism_name: Prevotellaceae bacterium


organism_name: Phocaeicola vulgatus


organism_name: Candidatus Cryptobacteroides bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Lachnospiraceae bacterium


organism_name: Alistipes putredinis


organism_name: Prevotella sp.


organism_name: Mediterraneibacter gnavus


organism_name: Klebsiella pneumoniae


organism_name: Escherichia coli


organism_name: Megamonas funiformis


organism_name: [Lactobacillus] rogosae


organism_name: Lachnospira sp.


organism_name: Fusobacterium mortiferum


organism_name: Prevotellamassilia timonensis


organism_name: Dialister succinatiphilus


organism_name: Megasphaera sp.


organism_name: Phocaeicola plebeius


organism_name: Candidatus Stercorousia sp.


organism_name: Segatella copri


organism_name: Phascolarctobacterium faecium


organism_name: Phocaeicola vulgatus


organism_name: Faecalibacterium prausnitzii


organism_name: Prevotellaceae bacterium


organism_name: Prevotella sp.


organism_name: Eshraghiella crossota


organism_name: Alloprevotella sp.


organism_name: Dialister sp.


organism_name: Succinivibrio sp.


organism_name: Segatella hominis


organism_name: Klebsiella pneumoniae


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome

organism_name: Leyella stercorea


organism_name: Dialister succinatiphilus


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Megasphaera sp.


organism_name: Bifidobacterium adolescentis


organism_name: Bacteroides uniformis


organism_name: Alistipes putredinis


organism_name: Lachnospiraceae bacterium


organism_name: Candidatus Cryptobacteroides bacterium


organism_name: Ligilactobacillus ruminis


organism_name: Veillonellaceae bacterium


organism_name: Prevotellaceae bacterium


organism_name: Bacilli bacterium


organism_name: Agathobacter rectalis


organism_name: Candidatus Ventrenecus sp.


organism_name: Prevotella sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Gemmiger formicilis


organism_name: Bifidobacterium longum


organism_name: Candidatus Limisoma sp.


organism_name: Dialister invisus


organism_name: Roseburia inulinivorans


organism_name: Blautia wexlerae


organism_name: Bacteroides sp.


organism_name: Lachnospiraceae bacterium


organism_name: Phocaeicola vulgatus


organism_name: [Eubacterium] siraeum


organism_name: Candidatus Fimenecus sp.


organism_name: Dialister hominis


organism_name: Alloprevotella sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Segatella hominis


organism_name: Bifidobacterium adolescentis


organism_name: Escherichia coli


organism_name: Prevotella sp.


organism_name: Dialister sp.


organism_name: Elusimicrobiaceae bacterium


organism_name: Prevotellamassilia timonensis


organism_name: Dialister succinatiphilus


organism_name: Succinivibrio sp.


organism_name: Agathobacter rectalis


organism_name: Segatella copri


organism_name: Clostridia bacterium


organism_name: Klebsiella pneumoniae


organism_name: Bacilli bacterium


organism_name: Leyella stercorea


organism_name: Prevotellaceae bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Acutalibacteraceae bacterium


organism_name: Gemmiger qucibialis


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Christensenellales bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Bifidobacterium adolescentis


organism_name: Megasphaera massiliensis


organism_name: Megasphaera micronuciformis


organism_name: Alloprevotella sp.


organism_name: Megasphaera elsdenii


organism_name: Dialister sp.


organism_name: Prevotella sp.


organism_name: Faecalibacterium sp.


organism_name: Escherichia coli


organism_name: Bifidobacterium sp.


organism_name: Succinivibrio sp.


organism_name: Candidatus Cryptobacteroides bacterium


organism_name: Candidatus Limisoma sp.


organism_name: Phocaeicola plebeius


organism_name: Prevotellaceae bacterium


organism_name: Agathobacter rectalis


organism_name: Thomasclavelia ramosa


organism_name: Veillonella seminalis


organism_name: Bacteroides xylanisolvens


organism_name: Dialister hominis


organism_name: Lachnospiraceae bacterium


organism_name: Segatella hominis


organism_name: Faecalibacterium prausnitzii


organism_name: Phocaeicola vulgatus


organism_name: Alistipes putredinis


organism_name: Oscillospiraceae bacterium


organism_name: Megasphaera sp.


organism_name: Bacteroides stercoris


organism_name: Ruminococcus sp.


organism_name: Prevotella sp.


organism_name: Alloprevotella sp.


organism_name: Eubacteriales bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Succinivibrio sp.


organism_name: Dialister sp.


organism_name: Bifidobacterium adolescentis


organism_name: Gemmiger sp.


organism_name: Holdemanella porci


organism_name: Gemmiger qucibialis


organism_name: Acutalibacteraceae bacterium


organism_name: Dialister succinatiphilus


organism_name: Clostridia bacterium


organism_name: Prevotellaceae bacterium


organism_name: Ruminococcus bromii


organism_name: Agathobacter rectalis


organism_name: Bacilli bacterium


organism_name: Prevotella sp.


organism_name: Comamonas kerstersii


organism_name: Escherichia coli


excluded_from_refseq: contaminated; derived from metagenome


organism_name: Candidatus Cryptobacteroides bacterium


organism_name: Christensenellales bacterium


organism_name: Alistipes putredinis


organism_name: Alphaproteobacteria bacterium


excluded_from_refseq: annotation fails completeness check; derived from metagenome

organism_name: Bifidobacterium adolescentis


organism_name: Dorea longicatena


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Faecalibacterium prausnitzii


organism_name: Megasphaera sp.


organism_name: Phocaeicola vulgatus


organism_name: Eubacterium sp.


organism_name: Bacteroides uniformis


organism_name: Bacteroides xylanisolvens


organism_name: Roseburia faecis


organism_name: Lachnospiraceae bacterium


organism_name: Eubacteriales bacterium


asm_submitter: Beijing Chao-yang Hospital

organism_name: Serratia sp. CY53125


organism_name: Serratia sp. CY43514


asm_submitter: Chulalongkorn University

organism_name: Bacillus subtilis


asm_submitter: Sun Yat-sen University

organism_name: Candidatus Wunengus sp. YC61


organism_name: Candidatus Hypogeohydataceae bacterium YC40


organism_name: Candidatus Wunengus sp. YC60


organism_name: Candidatus Brocadiaceae bacterium


organism_name: Candidatus Hypogeohydataceae bacterium YC41


organism_name: Candidatus Wunengus californicus


organism_name: Candidatus Tripitaka sp. YC43


organism_name: Candidatus Wunengus sp. YC65


organism_name: Candidatus Tripitaka californicus


organism_name: Candidatus Wujingus californicus


organism_name: Candidatus Hypogeohydataceae bacterium YC38


organism_name: Candidatus Wunengus sp. YC64


organism_name: Candidatus Wunengus sp. YC63


organism_name: Candidatus Avalokitesvara rifleensis


organism_name: Candidatus Brocadiia bacterium


asm_submitter: California Institute of Technology

organism_name: Methanosarcinaceae archaeon


asm_submitter: Prince of Songkla University

organism_name: Enterocloster aldenensis


organism_name: Blautia wexlerae


organism_name: Bacteroides uniformis


organism_name: Gemmiger sp.


organism_name: Sutterella wadsworthensis


organism_name: Blautia faecis


organism_name: Faecalibacterium prausnitzii


organism_name: Candidatus Scatocola faecipullorum


organism_name: Fusicatenibacter saccharivorans


organism_name: Alistipes putredinis


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Alistipes onderdonkii


organism_name: Longicatena caecimuris


organism_name: Candidatus Fimivicinus sp.


organism_name: Collinsella intestinalis


organism_name: Anaerotignum sp.


organism_name: Phocaeicola vulgatus


organism_name: Ruthenibacterium lactatiformans


organism_name: Mediterraneibacter faecis


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small; genus undefined

organism_name: [Eubacterium] siraeum


organism_name: Candidatus Scybalosoma faecavium


organism_name: Lachnospiraceae bacterium


organism_name: Lachnospira eligens


organism_name: Faecalibacterium sp.


organism_name: Turicimonas muris


organism_name: Odoribacter splanchnicus


organism_name: Eubacterium sp.


organism_name: Bacteroides uniformis


organism_name: Ruminococcus sp.


organism_name: Alistipes finegoldii


organism_name: Alistipes putredinis


organism_name: Oscillospiraceae bacterium


organism_name: Parabacteroides distasonis


organism_name: Candidatus Scatocola faecigallinarum


organism_name: Phocaeicola dorei


organism_name: Alphaproteobacteria bacterium


organism_name: Gemmiger formicilis


organism_name: Coprococcus sp.


organism_name: Agathobacter rectalis


organism_name: Ruminococcus bromii


organism_name: Lachnospiraceae bacterium


organism_name: Phascolarctobacterium faecium


organism_name: Akkermansia muciniphila


organism_name: Fusicatenibacter saccharivorans


organism_name: Faecalibacterium sp.


organism_name: Christensenellales bacterium


organism_name: Lachnospira sp.


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Alistipes shahii


organism_name: Alistipes inops


organism_name: [Eubacterium] siraeum


organism_name: Phocaeicola coprophilus


organism_name: Candidatus Fimenecus sp.


organism_name: Candidatus Limisoma sp.


organism_name: Paratractidigestivibacter sp.


organism_name: Prevotella sp.


organism_name: Alistipes putredinis


organism_name: Roseburia faecis


organism_name: Candidatus Cryptobacteroides bacterium


organism_name: Paraprevotella clara


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; genome length too small

organism_name: Phocaeicola coprocola


organism_name: Collinsella sp.


organism_name: Bifidobacterium adolescentis


asm_submitter: University of British Columbia

infraspecific_name: strain=St. Louis

organism_name: Rhodobacter capsulatus


organism_name: Eubacterium sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Catenibacterium mitsuokai


organism_name: Fusicatenibacter saccharivorans


organism_name: Agathobacter rectalis


organism_name: Bacteroides uniformis


organism_name: Phocaeicola vulgatus


organism_name: Coprococcus sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Butyricimonas virosa


organism_name: Lachnospira eligens


organism_name: Candidatus Limisoma sp.


organism_name: Phocaeicola massiliensis


organism_name: Mediterraneibacter faecis


organism_name: Alistipes putredinis


organism_name: Roseburia inulinivorans


organism_name: Oscillospiraceae bacterium


organism_name: Prevotella sp.


organism_name: Bacteroides stercoris


organism_name: Parabacteroides merdae


organism_name: Odoribacter splanchnicus


organism_name: Rhodobacter capsulatus


organism_name: [Eubacterium] siraeum


organism_name: Barnesiella intestinihominis


organism_name: Paraprevotella clara


organism_name: Phocaeicola vulgatus


organism_name: [Lactobacillus] rogosae


organism_name: Lachnospira sp.


organism_name: Bacteroides uniformis


organism_name: Phocaeicola coprocola


organism_name: Veillonella parvula


organism_name: Dysosmobacter sp.


organism_name: Holdemanella biformis


excluded_from_refseq: many frameshifted proteins


organism_name: Parabacteroides distasonis


organism_name: Alistipes onderdonkii


organism_name: Streptococcus anginosus


organism_name: Sutterella wadsworthensis


organism_name: Prevotella sp.


organism_name: Candidatus Fimenecus sp.


asm_submitter: INSTITUTE OF URBAN ENVIRONMENT CAS

organism_name: Streptomyces rochei


organism_name: Bacteroides stercoris


organism_name: Rhodobacter capsulatus


organism_name: Mediterraneibacter faecis


organism_name: Bacteroides thetaiotaomicron


asm_submitter: Taizhou Municipal Hospital

organism_name: Klebsiella grimontii


asm_submitter: Shanghai Hongkou District Center for Disease Control and Prevention

organism_name: Staphylococcus aureus


organism_name: Phocaeicola sp.


organism_name: Candidatus Limisoma sp.


organism_name: Paraprevotella clara


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Parabacteroides sp.


organism_name: Holdemanella biformis


organism_name: Lachnospiraceae bacterium


organism_name: Faecalibacterium sp.


organism_name: Parabacteroides distasonis


organism_name: Lachnospira sp.


asm_submitter: Northwest A&F University

excluded_from_refseq: derived from metagenome

organism_name: Candidatus Karelsulcia muelleri


organism_name: Bacteroides uniformis


organism_name: Faecalibacterium prausnitzii


organism_name: Candidatus Fimenecus sp.


organism_name: Phascolarctobacterium succinatutens


organism_name: Oscillospiraceae bacterium


organism_name: Lachnospira eligens


organism_name: Ruminococcus sp.


organism_name: Catenibacterium sp.


organism_name: Odoribacter laneus


organism_name: Coprococcus sp.


organism_name: Christensenellaceae bacterium


organism_name: [Lactobacillus] rogosae


organism_name: Collinsella sp.


organism_name: Christensenellales bacterium


organism_name: Phocaeicola dorei


organism_name: Dialister sp.


organism_name: Candidatus Cryptobacteroides bacterium


organism_name: Lachnospiraceae bacterium


organism_name: [Eubacterium] siraeum


organism_name: Acutalibacteraceae bacterium


organism_name: Roseburia faecis


organism_name: Duodenibacillus sp.


organism_name: Prevotella sp.


organism_name: Phascolarctobacterium succinatutens


organism_name: Candidatus Karelsulcia muelleri


organism_name: Faecousia sp.


organism_name: Oscillospiraceae bacterium


organism_name: Ruminococcus sp.


organism_name: Mediterraneibacter torques


organism_name: Holdemanella biformis


organism_name: Collinsella sp.


organism_name: Clostridia bacterium


organism_name: Methanobrevibacter smithii


organism_name: Roseburia hominis


organism_name: Blautia stercoris


organism_name: Lachnospiraceae bacterium


organism_name: Sellimonas intestinalis


organism_name: Christensenellales bacterium


organism_name: Phocaeicola massiliensis


organism_name: Prevotella sp.


organism_name: Candidatus Cryptobacteroides bacterium


organism_name: Mediterraneibacter faecis


organism_name: Coprococcus sp.


organism_name: Candidatus Karelsulcia muelleri


organism_name: Oscillospiraceae bacterium


organism_name: Phascolarctobacterium sp.


organism_name: Faecousia sp.


organism_name: Butyribacter sp.


organism_name: Bacteroides uniformis


organism_name: Megamonas funiformis


organism_name: Barnesiella intestinihominis


organism_name: Odoribacter laneus


organism_name: Candidatus Fimenecus sp.


organism_name: Segatella copri


organism_name: Acutalibacteraceae bacterium


organism_name: Segatella hominis


organism_name: Faecalibacterium prausnitzii


organism_name: Parabacteroides distasonis


organism_name: Lachnospira eligens


organism_name: Phocaeicola dorei


organism_name: Candidatus Karelsulcia muelleri


organism_name: Candidatus Scatocola faecipullorum


organism_name: Mediterraneibacter torques


organism_name: Faecalibacterium sp.


organism_name: Dysosmobacter welbionis


organism_name: Bacteroides uniformis


organism_name: Phascolarctobacterium sp.


organism_name: Bacteroides stercoris


organism_name: Alistipes putredinis


organism_name: Lachnospiraceae bacterium


organism_name: Paraprevotella clara


organism_name: Oscillospiraceae bacterium


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Odoribacter splanchnicus


organism_name: Phocaeicola vulgatus


organism_name: Sutterella wadsworthensis


organism_name: Phocaeicola coprocola


organism_name: Faecalibacterium prausnitzii


organism_name: Eubacterium sp.


organism_name: Clostridia bacterium


organism_name: Candidatus Karelsulcia muelleri


organism_name: Agathobacter rectalis


organism_name: Prevotella sp.


organism_name: Candidatus Limisoma sp.


organism_name: Bacteroides uniformis


organism_name: Phascolarctobacterium succinatutens


organism_name: Parabacteroides distasonis


organism_name: Parabacteroides merdae


organism_name: Segatella hominis


organism_name: Faecalibacterium sp.


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Paraprevotella clara


organism_name: Candidatus Cryptobacteroides bacterium


organism_name: Bacteroides faecis


organism_name: Mediterraneibacter faecis


organism_name: Alistipes shahii


organism_name: Phocaeicola massiliensis


organism_name: [Eubacterium] siraeum


organism_name: Lachnospiraceae bacterium


organism_name: Candidatus Karelsulcia muelleri


organism_name: Phocaeicola coprocola


organism_name: Candidatus Hodgkinia cicadicola


organism_name: Prevotella sp.


organism_name: Dysosmobacter sp.


organism_name: Alistipes putredinis


organism_name: Phocaeicola vulgatus


organism_name: Holdemanella porci


organism_name: Faecalibacterium prausnitzii


organism_name: Paraprevotella clara


organism_name: Sutterella wadsworthensis


organism_name: Prevotellaceae bacterium


organism_name: Akkermansia muciniphila


organism_name: Mediterraneibacter torques


organism_name: Arsenophonus sp.


organism_name: Oscillospiraceae bacterium


organism_name: Parabacteroides merdae


organism_name: Anaerostipes hadrus


organism_name: Blautia stercoris


organism_name: Allocoprococcus comes


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Bacteroides ovatus


organism_name: Parabacteroides distasonis


organism_name: Blautia sp.


organism_name: Collinsella sp.


organism_name: Bacteroides fragilis


organism_name: Blautia wexlerae


organism_name: Clostridium fessum


organism_name: Paraprevotella clara


organism_name: Phascolarctobacterium faecium


organism_name: Roseburia intestinalis


organism_name: Bacteroides uniformis


organism_name: [Lactobacillus] rogosae


organism_name: Sutterella wadsworthensis


organism_name: Lachnospiraceae bacterium


organism_name: Bacteroides thetaiotaomicron


organism_name: Streptococcus thermophilus


organism_name: Arsenophonus sp.


organism_name: Lachnospira eligens


asm_submitter: Oregon Health and Science University

organism_name: Corynebacterium durum


organism_name: Fusicatenibacter saccharivorans


organism_name: Bacteroides stercoris


organism_name: Eubacterium sp.


organism_name: Enterocloster sp.


organism_name: Faecalibacterium sp.


organism_name: Agathobacter rectalis


organism_name: Odoribacter splanchnicus


asm_submitter: Seoul National University

organism_name: Megasphaera elsdenii


organism_name: Parabacteroides merdae


asm_submitter: Shanghai Academy of Agricultural Sciences

organism_name: Pseudomonas sp. A6


organism_name: Faecalibacterium prausnitzii


organism_name: Paraprevotella clara


organism_name: Bacteroides thetaiotaomicron


organism_name: Clostridia bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Bacteroides uniformis


organism_name: Bacteroides ovatus


asm_submitter: NJAU

organism_name: Bifidobacterium bifidum


asm_submitter: Jinhua Hospital of Zhejiang University

organism_name: Pseudomonas kurunegalensis


organism_name: Bacteroides stercoris


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genome length too small

organism_name: Clostridium fessum


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Butyribacter sp.


organism_name: [Lactobacillus] rogosae


organism_name: Parabacteroides distasonis


organism_name: Lachnospira eligens


organism_name: Sutterella wadsworthensis


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Bacteroides fragilis


organism_name: Fusicatenibacter saccharivorans


organism_name: Flavonifractor plautii


asm_submitter: national health research institutes

organism_name: Elizabethkingia anophelis


organism_name: Blautia stercoris


organism_name: Phascolarctobacterium faecium


organism_name: Phocaeicola vulgatus


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Christensenellales bacterium


organism_name: Phocaeicola dorei


organism_name: Faecalibacterium sp.


organism_name: Faecousia sp.


organism_name: Oscillospiraceae bacterium


organism_name: Akkermansia muciniphila


organism_name: Alistipes sp.


organism_name: Phascolarctobacterium succinatutens


organism_name: Lachnospiraceae bacterium


organism_name: Desulfovibrio sp.


organism_name: Alistipes shahii


organism_name: Eubacteriales bacterium


organism_name: Butyribacter sp.


organism_name: Holdemanella porci


organism_name: Parabacteroides johnsonii


organism_name: Parabacteroides distasonis


organism_name: Segatella copri


organism_name: Paraprevotella xylaniphila


organism_name: Candidatus Fimivicinus sp.


organism_name: Anaerostipes hadrus


asm_submitter: NHRI

organism_name: Granulicatella adiacens


organism_name: Pseudoruminococcus massiliensis


organism_name: Oscillospiraceae bacterium


organism_name: Mediterraneibacter torques


organism_name: [Eubacterium] siraeum


organism_name: Angelakisella sp.


organism_name: Muribaculaceae bacterium


organism_name: Barnesiella intestinihominis


organism_name: Phascolarctobacterium succinatutens


organism_name: Alistipes shahii


organism_name: Lachnospiraceae bacterium


organism_name: [Lactobacillus] rogosae


organism_name: Alistipes putredinis


organism_name: Alphaproteobacteria bacterium


organism_name: Christensenellales bacterium


organism_name: Holdemanella porci


organism_name: Gemmiger formicilis


organism_name: Bacteroides stercoris


organism_name: Candidatus Scatenecus faecavium


organism_name: Phocaeicola dorei


organism_name: Alistipes sp.


organism_name: Candidatus Scatousia sp.


organism_name: Paraprevotella xylaniphila


organism_name: Desulfovibrio sp.


organism_name: Oscillospiraceae bacterium


organism_name: Candidatus Fimivicinus sp.


organism_name: Candidatus Gallispira sp.


organism_name: Muribaculaceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Faecousia sp.


organism_name: Lachnospira eligens


organism_name: Agathobacter rectalis


organism_name: Blautia wexlerae


organism_name: Parabacteroides distasonis


organism_name: Anaerobutyricum hallii


organism_name: Gemmiger formicilis


organism_name: Lachnospira sp.


organism_name: Anaerostipes hadrus


organism_name: Acetatifactor sp.


organism_name: [Clostridium] leptum


organism_name: Eubacterium sp.


organism_name: Alistipes onderdonkii


organism_name: Alistipes shahii


organism_name: Candidatus Fimivicinus sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Gemmiger qucibialis


organism_name: [Eubacterium] siraeum


organism_name: Oscillospiraceae bacterium


organism_name: Barnesiella intestinihominis


organism_name: Collinsella sp.


organism_name: Mediterraneibacter torques


organism_name: Prevotella sp.


organism_name: Sutterella wadsworthensis


organism_name: Segatella copri


organism_name: Phocaeicola massiliensis


organism_name: Lachnospiraceae bacterium


organism_name: Phascolarctobacterium succinatutens


organism_name: Candidatus Cryptobacteroides bacterium


organism_name: Christensenellales bacterium


organism_name: Lachnospira sp.


organism_name: Phocaeicola dorei


organism_name: Faecalibacterium prausnitzii


organism_name: Parabacteroides distasonis


organism_name: Ruminococcus sp.


organism_name: Phocaeicola vulgatus


organism_name: Roseburia faecis


organism_name: Blautia sp.


organism_name: Ruminococcus bicirculans (ex Wegman et al. 2014)


organism_name: Intestinimonas butyriciproducens


organism_name: Blautia faecis


organism_name: Gemmiger qucibialis


organism_name: Acidaminococcus intestini


organism_name: Dialister hominis


organism_name: Adlercreutzia equolifaciens


organism_name: Bacteroides cellulosilyticus


organism_name: Clostridia bacterium


organism_name: Bacteroides caccae


organism_name: Faecalibacterium sp.


organism_name: Bifidobacterium adolescentis


organism_name: Faecousia sp.


organism_name: Fusicatenibacter saccharivorans


organism_name: Ruminococcus bromii


organism_name: Coprococcus sp.


organism_name: Mesosutterella multiformis


organism_name: Eubacterium sp.


organism_name: Bacteroides uniformis


organism_name: Lachnospiraceae bacterium


organism_name: Bilophila wadsworthia


asm_submitter: North-West University

organism_name: Pseudomonas protegens


asm_submitter: INEI - ANLIS Dr. Carlos G. Malbran

organism_name: Acinetobacter baumannii


asm_submitter: West African Centre for Cell Biology of Infectious Pathogens

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul


organism_name: Salmonella enterica subsp. enterica serovar Typhi


organism_name: Salmonella enterica subsp. enterica serovar Bangui


organism_name: Salmonella enterica subsp. enterica serovar Virchow


organism_name: Salmonella enterica subsp. enterica serovar Durham


organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Salmonella enterica subsp. enterica serovar Jukestown


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Pseudomonas aeruginosa


asm_submitter: Missouri University of Science and Technology

organism_name: Ralstonia sp. PR5


organism_name: Paraburkholderia fungorum


organism_name: Burkholderia sp. PR2


organism_name: Burkholderia vietnamiensis


organism_name: Klebsiella pneumoniae


organism_name: Klebsiella quasipneumoniae


organism_name: Klebsiella michiganensis


organism_name: Enterobacter hormaechei


organism_name: Enterobacter kobei


organism_name: Enterobacter soli


organism_name: Enterobacter mori


organism_name: Enterobacter asburiae


asm_submitter: Nanjing Chengshi Biopharmaceutical


asm_submitter: Yibin University

organism_name: Lactiplantibacillus plantarum


asm_submitter: UKM Medical Molecular Biology Institute (UMBI)

excluded_from_refseq: annotation fails completeness check

organism_name: Staphylococcus aureus


asm_submitter: Instituto de Higiene, Facultad de Medicina

organism_name: Klebsiella quasipneumoniae subsp. similipneumoniae


asm_submitter: GDUT

organism_name: Cronobacter sakazakii


asm_submitter: North South University

organism_name: Bacillus cereus


asm_submitter: The Affiliated Taian City Central Hospital of Qingdao University


asm_submitter: Hunan University of Science and Technology

organism_name: Streptomyces sp. BR1


asm_submitter: PT. Central Proteina Prima, Tbk

infraspecific_name: strain=MIR

organism_name: Bacillus stercoris


asm_submitter: Hanoi University of Science and Technology

organism_name: Glutamicibacter mysorens


asm_submitter: NTT Hi-Tech Institute, Nguyen Tat Thanh University

organism_name: Cytobacillus kochii


asm_submitter: Sri Ramachandra Institute of Higher Education and Research

organism_name: Escherichia coli


asm_submitter: Kyung Hee University


asm_submitter: South China Agricultural University

organism_name: Candidatus Enterococcus leclercqii


asm_submitter: LLP "National Scientific Center of Especially Dangerous Infections named after Masgut Aikimbayev"

organism_name: Yersinia pestis


organism_name: Yersinia pseudotuberculosis


asm_submitter: Chattogram Veterinary and Animal Sciences University

organism_name: Vibrio parahaemolyticus


asm_submitter: CSIR-IHBT

organism_name: Geobacillus thermodenitrificans subsp. calidus


asm_submitter: Monash University


asm_submitter: School of Medicine, Shinshu University

organism_name: Pasteurella multocida


asm_submitter: French National Institute for Agriculture, Food, and Environment (INRAE)

organism_name: Halomonas sp. TP35


organism_name: Ewingella sp. AOP9-I1-14


organism_name: Ewingella sp. AOP8-B2-18


organism_name: Halomonas sp. AOP7-E1-9


organism_name: Psychrobacter sp. AOP7-D2-23


organism_name: Psychrobacter sp. AOP7-D1-21


organism_name: Psychrobacter sp. AOP7-D1-15


organism_name: Halomonas sp. AOP7-C1-21


organism_name: Psychrobacter sp. AOP7-C1-14


organism_name: Psychrobacter sp. AOP7-C1-12


organism_name: Halomonas sp. AOP7-B1-26


organism_name: Psychrobacter sp. AOP7-B1-25


organism_name: Psychrobacter sp. AOP7-B1-24


organism_name: Psychrobacter sp. AOP7-A1-24


organism_name: Psychrobacter sp. AOP7-A1-18


organism_name: Pseudoalteromonas sp. AOP7-A1-14


organism_name: Psychrobacter sp. AOP5-GZ1-6


organism_name: Psychrobacter sp. AOP5-CZ1-12


organism_name: Halomonas sp. AOP5-CZ2-32


organism_name: Halomonas sp. AOP5-B2-8


organism_name: Glutamicibacter sp. AOP5-B1-3


organism_name: Specibacter sp. AOP5-B1-6


organism_name: Glutamicibacter sp. AOP5-A2-7


organism_name: Brachybacterium sp. AOP42-E1-35


asm_submitter: University of Kentucky

excluded_from_refseq: from large multi-isolate project

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Halomonas sp. AOP42-E1-40


organism_name: Halomonas sp. AOP43-A1-21


asm_submitter: Health Protection Agency

organism_name: Listeria monocytogenes


organism_name: Halomonas sp. AOP42-D2-25


organism_name: Halomonas sp. AOP42-D1-22


organism_name: Halomonas sp. AOP42-E1-30


organism_name: Halomonas sp. AOP42-C2-25


organism_name: Halomonas sp. AOP42-C2-23


asm_submitter: Public Health England

organism_name: Vibrio cholerae


organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Brachybacterium sp. AOP42-C2-15


organism_name: Escherichia coli


organism_name: Halomonas sp. AOP42-C1-46


organism_name: Brachybacterium sp. AOP42-B2-9


organism_name: Halomonas sp. AOP42-B2-16


organism_name: Halomonas sp. AOP42-A1-22


organism_name: Psychrobacter sp. AOP42-A1-21


organism_name: Halomonas sp. AOP42-A1-14


organism_name: Shigella sonnei


organism_name: Halomonas sp. AOP4-A1-5


organism_name: Corynebacterium sp. AOP40-4SA-5


organism_name: Shigella flexneri


organism_name: Corynebacterium sp. AOP40-9SA-29


organism_name: Glutamicibacter sp. AOP38-B1-38


organism_name: Corynebacterium sp. AOP36-E1-14


organism_name: Arthrobacter sp. AOP36-C1-22


asm_submitter: Wayne State University

organism_name: Stenotrophomonas maltophilia


organism_name: Pseudomonas aeruginosa


organism_name: Escherichia coli


organism_name: Halomonas sp. AOP35-4E-18


organism_name: Arthrobacter sp. AOP36-A1-22


organism_name: Brachybacterium sp. AOP35-5H-19


asm_submitter: KULeuven

organism_name: Staphylococcus aureus


organism_name: Yersinia pseudotuberculosis


excluded_from_refseq: genus undefined

organism_name: Micrococcaceae bacterium AOP34-BR2-30


organism_name: Corynebacterium sp. AOP34-AQ2-28


organism_name: Corynebacterium sp. AOP34-BR1-29


asm_submitter: MEDICAL RESEARCH AND DEVELOPMENT ARGE  BIYOTEKNOLOJI SANAYI VE TICARET LTD STI

organism_name: Akkermansia muciniphila


organism_name: Glutamicibacter sp. AOP33-2CA-4


organism_name: Halomonas sp. AOP31-E2-25


organism_name: Psychrobacter sp. AOP31-E1-50


asm_submitter: Shanghai Ocean University


organism_name: Psychrobacter sp. AOP31-B2-9


organism_name: Halomonas sp. AOP31-B1-25


organism_name: Pseudoalteromonas sp. AOP31-A2-14


organism_name: Shigella sonnei


organism_name: Psychrobacter sp. AOP31-A1-22


organism_name: Psychrobacter sp. AOP30-A2-5


organism_name: Escherichia coli


organism_name: Halomonas sp. AOP30-A1-24


organism_name: Escherichia albertii


asm_submitter: Guangdong Ocean University

organism_name: Bacillus stercoris


organism_name: Psychrobacter sp. AOP3-A1-26


asm_submitter: Institute of Microbiology

organism_name: Mycoplasma sp. 332


organism_name: Brachybacterium sp. AOP3-A1-3


organism_name: Glutamicibacter sp. AOP3-A1-12


organism_name: Psychrobacter sp. AOP29-E1-7


organism_name: Psychrobacter sp. AOP29-E1-4


organism_name: Brachybacterium sp. AOP29-B2-41


asm_submitter: Jiangsu Academy of Agricultural Sciences

organism_name: Cellulomonas sp. CW35


asm_submitter: Guangxi Universiy

organism_name: Pseudomonas sp. A014


organism_name: Halomonas sp. AOP29-A2-28


organism_name: Halomonas sp. AOP27-A1-34


organism_name: Shigella flexneri


organism_name: Halomonas sp. AOP27-A1-41


organism_name: Brachybacterium sp. AOP25-B2-12


organism_name: Escherichia coli


organism_name: Brachybacterium sp. AOP24-D1-21


organism_name: Halomonas sp. AOP25-F1-15


organism_name: Halomonas sp. AOP23-I1-8


organism_name: Halomonas sp. AOP23-I1-17


organism_name: Psychrobacter sp. AOP22-C2-17


asm_submitter: National Center for Biotechnology Information

organism_name: Staphylococcus aureus


organism_name: Psychrobacter sp. AOP22-C2-15


organism_name: Psychrobacter sp. AOP22-C1-C5


organism_name: Halomonas sp. AOP22-C1-8


organism_name: Psychrobacter sp. AOP22-C1-30


organism_name: Psychrobacter sp. AOP22-C1-22


organism_name: Halomonas sp. AOP14-E2-s-20


organism_name: Halomonas sp. AOP12-C2-37


organism_name: Halomonas sp. AOP13-D3-9


organism_name: Corynebacterium sp. AOP12-C2-36


organism_name: Halomonas sp. AOP12-B1-6


organism_name: Glutamicibacter sp. AOP12-B1-11


organism_name: Halomonas sp. AOP1-B1-8


organism_name: Psychrobacter sp. AOP1-A1-60


organism_name: Psychrobacter sp. AOP1-A1-57


organism_name: Psychrobacter sp. 367


organism_name: Psychrobacter sp. 364


organism_name: Staphylococcus aureus


organism_name: Glutamicibacter sp. 363


organism_name: Glutamicibacter sp. 287


organism_name: Halomonas sp. 200


organism_name: Arthrobacter sp. 179


organism_name: Halomonas sp. 111


organism_name: Halomonas sp. 86


organism_name: Brachybacterium sp. 107


organism_name: Halomonas sp. 72


asm_submitter: Bellevue University

organism_name: Roseinatronobacter sp. NSM


organism_name: Paracoccus sp. NSM


organism_name: Salinarimonas sp. NSM


organism_name: Rheinheimera sp. NSM


organism_name: Marinobacter sp. NSM


organism_name: Ectopseudomonas khazarica


asm_submitter: FDA

organism_name: Campylobacter coli


asm_submitter: Los Angeles County Public Health Lab microbial pathogen submission group

organism_name: Acinetobacter baumannii


organism_name: Staphylococcus aureus


organism_name: Klebsiella pneumoniae


organism_name: Pseudomonas aeruginosa


organism_name: Escherichia coli


organism_name: Neisseria meningitidis


organism_name: Streptococcus pneumoniae


organism_name: Streptococcus pyogenes


asm_submitter: West China Second University Hospital, Sichuan University


asm_submitter: Oregon State University

infraspecific_name: strain=ATCC 6633

organism_name: Bacillus spizizenii ATCC 6633 = JCM 2499


asm_submitter: Chengdu University

organism_name: Streptococcus sp. cx1


asm_submitter: jiangsu university

organism_name: Sphingopyxis sp. Q841


asm_submitter: Shandong Agriculture University

organism_name: Riemerella anatipestifer


asm_submitter: Yerevan State University

organism_name: Halomonas elongata


asm_submitter: University of Copenhagen

organism_name: Reella acinonychis


asm_submitter: Health Protection Agency

organism_name: Listeria monocytogenes


asm_submitter: Public Health England

organism_name: Yersinia enterocolitica


organism_name: Vibrio cholerae


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Shigella flexneri


organism_name: Escherichia coli


organism_name: Shigella sonnei


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


asm_submitter: CDC


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


organism_name: Vibrio parahaemolyticus


asm_submitter: Shanxi Medical University

organism_name: Leucobacter fengyongliangi


asm_submitter: University of Technology Sydney

organism_name: Acinetobacter variabilis


asm_submitter: National Yang Ming Chiao Tung University

organism_name: Lactiplantibacillus plantarum


organism_name: Lactobacillus gasseri


asm_submitter: Institut de Physique du Globe de Paris

organism_name: Gammaproteobacteria bacterium


organism_name: Hyphomicrobiales bacterium


organism_name: Microthrixaceae bacterium


organism_name: Myxococcaceae bacterium


organism_name: Sporichthyaceae bacterium


organism_name: Hyphomicrobium sp.


organism_name: Pseudonocardia sp.


organism_name: Vibrio cholerae


organism_name: Beijerinckiaceae bacterium


organism_name: Methylophilaceae bacterium


organism_name: Nitrososphaerota archaeon


organism_name: Betaproteobacteria bacterium


organism_name: Vibrio parahaemolyticus


organism_name: Aquabacterium sp.


organism_name: Panacagrimonas sp.


organism_name: Shigella flexneri


organism_name: Reyranella sp.


organism_name: Gemmatimonadaceae bacterium


organism_name: Sphingosinicella sp.


organism_name: Campylobacter jejuni


organism_name: Listeria monocytogenes


organism_name: Gammaproteobacteria bacterium


organism_name: Armatimonadota bacterium


organism_name: Gemmatimonadota bacterium


organism_name: Vibrio cholerae


organism_name: Alphaproteobacteria bacterium


organism_name: Methanobacteriota archaeon


organism_name: Escherichia coli


organism_name: Caulobacteraceae bacterium


organism_name: Actinomycetota bacterium


organism_name: Gemmobacter sp.


organism_name: Vibrio parahaemolyticus


organism_name: Panacagrimonas sp.


organism_name: Betaproteobacteria bacterium


organism_name: Pseudonocardia sp.


organism_name: Anaerolineales bacterium


organism_name: Sphingosinicella sp.


organism_name: Blastocatellia bacterium


organism_name: Nitrospiraceae bacterium


organism_name: Candidatus Nitrosotenuis sp.


organism_name: Planctomycetota bacterium


organism_name: Campylobacter coli


organism_name: Gemmatimonadaceae bacterium


organism_name: Vibrio cholerae


organism_name: Pseudomonadota bacterium


organism_name: Paracoccaceae bacterium


organism_name: Rhodospirillales bacterium


organism_name: Sporichthyaceae bacterium


organism_name: Vibrio parahaemolyticus


organism_name: Acidimicrobiia bacterium


organism_name: Escherichia coli


organism_name: Actinomycetota bacterium


organism_name: Shigella flexneri


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Elusimicrobiota bacterium


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Planctomycetaceae bacterium


organism_name: Nitrososphaerota archaeon


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Phycisphaerales bacterium


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Betaproteobacteria bacterium


asm_submitter: FDA/CFSAN

organism_name: Listeria monocytogenes


organism_name: Gemmatimonadaceae bacterium


organism_name: Chromatiales bacterium


organism_name: Hyphomicrobium sp.


organism_name: Chloroflexota bacterium


asm_submitter: Yangzhou University

organism_name: Klebsiella ornithinolytica


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


asm_submitter: UNIFESP

organism_name: Klebsiella pneumoniae


asm_submitter: FDA Center for Food Safety and Applied Nutrition

organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Newport


asm_submitter: National Center for Biotechnology Information

organism_name: Legionella pneumophila


organism_name: Klebsiella quasipneumoniae


asm_submitter: Tshwane University of Technology

excluded_from_refseq: fragmented assembly

infraspecific_name: strain=SS-TM

organism_name: Bacillus sp. SS-TM


infraspecific_name: strain=HC-TM

organism_name: Bacillus sp. HC-TM


infraspecific_name: strain=HC-Mk

organism_name: Bacillus sp. HC-Mk


organism_name: Bacillus sp. B-TM1


organism_name: Gemmatimonadota bacterium


infraspecific_name: strain=D-CC

organism_name: Bacillus sp. D-CC


organism_name: Acidobacteriota bacterium


organism_name: Nitrospiraceae bacterium


organism_name: Nitrosopumilaceae archaeon


organism_name: Sporichthyaceae bacterium


organism_name: Methanobacteriota archaeon


organism_name: Betaproteobacteria bacterium


organism_name: Gemmatimonadales bacterium


organism_name: Bacteroidota bacterium


organism_name: Actinomycetota bacterium


organism_name: Legionella pneumophila


organism_name: Gammaproteobacteria bacterium


organism_name: Bradyrhizobium sp.


organism_name: Alphaproteobacteria bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Panacagrimonas sp.


organism_name: Gemmatimonadaceae bacterium


organism_name: Rhodoferax sp.


organism_name: Pseudonocardiales bacterium


organism_name: Actinokineospora sp.


organism_name: Nitrososphaerota archaeon


organism_name: Deltaproteobacteria bacterium


organism_name: Microthrixaceae bacterium


organism_name: Acidimicrobiales bacterium


organism_name: Limnobacter sp.


organism_name: Nitrosopumilaceae archaeon


organism_name: Pseudomarimonas sp.


organism_name: Acidovorax sp.


excluded_from_refseq: derived from metagenome; genome length too large; genus undefined

organism_name: Candidatus Eiseniibacteriota bacterium


organism_name: Legionella pneumophila


organism_name: Actinomycetota bacterium


asm_submitter: Inserm

organism_name: Acinetobacter baumannii


asm_submitter: Health Protection Agency

organism_name: Escherichia coli


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Neisseria meningitidis


asm_submitter: Universiti Putra Malaysia

organism_name: Streptococcus canis


organism_name: Listeria monocytogenes


asm_submitter: KULeuven

organism_name: Staphylococcus aureus


organism_name: Enterococcus faecalis


organism_name: Enterococcus faecium


asm_submitter: SSI Institute for Single Crystals of NAS of Ukraine

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins


asm_submitter: Kyungpook National Univeristy

organism_name: Cutibacterium acnes


organism_name: Streptococcus sp. HJ1


asm_submitter: Public Health England

organism_name: Campylobacter coli


asm_submitter: University of Colorado Boulder


asm_submitter: Chinese Academy of Agricultural Sciences

infraspecific_name: strain=FXR

organism_name: Megasphaera elsdenii


asm_submitter: Free University of Bozen-Bolzano

isolate: CRmali

organism_name: Candidatus Carsonella ruddii


isolate: PSpru

organism_name: Enterobacteriaceae bacterium


asm_submitter: Instituto Adolfo Lutz


isolate: CRpru


isolate: PSmali


asm_submitter: MRSN BI Team


organism_name: Serratia marcescens


organism_name: Pseudomonas aeruginosa


asm_submitter: University of Science Malaysia

organism_name: Cupriavidus oxalaticus


isolate: SERmali

organism_name: Serratia sp. (in: enterobacteria)


organism_name: Klebsiella pneumoniae


organism_name: Enterobacter hormaechei


asm_submitter: Northeastern University

organism_name: Kocuria turfanensis


organism_name: Kocuria oceani


asm_submitter: Shandong University

organism_name: Thermophagus sp. OGC60D27


organism_name: Saccharicrinis sp. GN24d3


organism_name: Marinifilum sp. RC60d5


organism_name: Geofilum sp. OHC36d9


asm_submitter: National Vererinary Research Intitute

organism_name: Ornithobacterium rhinotracheale


asm_submitter: University of Bern

organism_name: Salmonella enterica


asm_submitter: Huzhou center for disease control and prevention


asm_submitter: Northwest A&F University

organism_name: Arsenophonus sp.


asm_submitter: Institute of Environmental Science and Research

organism_name: Escherichia coli


asm_submitter: Jiangsu Academy of Agricultural Science

organism_name: Pediococcus acidilactici


asm_submitter: All-Russia Research Institute for Agricultural Microbiology

organism_name: Bradyrhizobium barranii


annotation_name: Annotation submitted by Friedrich Schiller University

annotation_provider: Friedrich Schiller University

asm_submitter: Friedrich Schiller University Jena

organism_name: Brakhagea aquatica


asm_submitter: Sam Houston State University

organism_name: Enterococcus faecalis


asm_submitter: CDC


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


asm_submitter: National Center for Biotechnology Information

infraspecific_name: strain=JCM 7671

organism_name: Listeria monocytogenes


asm_submitter: FH Muenster

organism_name: Pediococcus pentosaceus


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


asm_submitter: Center for Food Safety and Applied Nutrition


organism_name: Enterobacter hormaechei


organism_name: Klebsiella pneumoniae


organism_name: Vibrio cholerae


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


isolate: HB_Patient 15


isolate: HB_Patient 17


isolate: HB_Patient 24


isolate: HB_Patient 29


isolate: HB_Patient 30


isolate: HB_Patient 33

organism_name: Klebsiella aerogenes


isolate: HB_Patient 38


isolate: HB_Patient 43


isolate: HB_Patient 53


isolate: HB_Patient 77


isolate: HB_Patient 84


organism_name: Pseudomonas aeruginosa


isolate: HB_Patient 106


isolate: HB_Patient 107


isolate: HB_Patient 108


isolate: HB_Patient 110


isolate: HB_Patient 109


isolate: HB_Patient 12


isolate: HB_Patient 112


isolate: HB_Patient 113


isolate: HB_Patient 114


isolate: HB_Patient 115

organism_name: Klebsiella variicola


isolate: HB_Patient 14


isolate: HB_Patient 3


isolate: HB_Patient 23


isolate: HB_Patient 26


isolate: HB_Patient 27


isolate: HB_Patient 28


isolate: HB_Patient 95


isolate: HB_Patient 97


isolate: HB_Patient 99


isolate: HB_Patient 100


isolate: HB_Patient 31


isolate: HB_Patient 37


isolate: HB_Patient 5


isolate: HB_Patient 41


isolate: HB_Patient 42


isolate: HB_Patient 48


isolate: HB_Patient 50


isolate: HB_Patient 6


isolate: HB_Patient 54


isolate: HB_Patient 61


isolate: HB_Patient 67


isolate: HB_Patient 68


isolate: HB_Patient 89


organism_name: Salmonella enterica


isolate: HB_Patient 56


isolate: HB_Patient 58


isolate: HB_Patient 62


isolate: HB_Patient 65


isolate: HB_Patient 70


isolate: HB_Patient 71


isolate: HB_Patient 75


isolate: HB_Patient 73


isolate: HB_Patient 76


isolate: HB_Patient 85


isolate: HB_Patient 80


isolate: HB_Patient 86


isolate: HB_Patient 87


isolate: HB_Patient 88


isolate: HB_Patient 10


isolate: HB_Patient 93


isolate: HB_Patient 63


organism_name: Enterobacter hormaechei subsp. xiangfangensis


organism_name: Enterobacter bugandensis


organism_name: Escherichia coli


organism_name: Proteus mirabilis


organism_name: Enterobacter hormaechei subsp. steigerwaltii


organism_name: Morganella morganii


organism_name: Shigella flexneri


organism_name: Citrobacter murliniae


organism_name: Serratia marcescens


organism_name: Enterobacter roggenkampii


organism_name: Klebsiella pneumoniae


organism_name: Enterobacter kobei


organism_name: Enterobacter hormaechei subsp. oharae


organism_name: Campylobacter upsaliensis


organism_name: Campylobacter jejuni


organism_name: Shigella boydii


organism_name: Salmonella enterica


organism_name: Yersinia enterocolitica


organism_name: Campylobacter coli


asm_submitter: FDA


isolate: clinical

organism_name: Neisseria meningitidis


organism_name: Neisseria gonorrhoeae


organism_name: Legionella pneumophila


organism_name: Acinetobacter baumannii


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Escherichia coli


organism_name: Enterobacter hormaechei


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Idikan


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. houtenae serovar [1],40:z4,z23:-


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. houtenae serovar 50:g,z51:-


organism_name: Salmonella enterica subsp. enterica serovar Javiana


organism_name: Campylobacter jejuni


organism_name: Yersinia enterocolitica


organism_name: Klebsiella pneumoniae


organism_name: Campylobacter coli


asm_submitter: VNU-Institute of Microbiology and Biotechnology, Vietnam National University, Hanoi

infraspecific_name: strain=TPM 12.9

organism_name: Companilactobacillus zhachilii


asm_submitter: Yonsei University

organism_name: Bifidobacterium longum


organism_name: Acinetobacter ursingii


organism_name: Campylobacter upsaliensis


organism_name: Escherichia coli


infraspecific_name: strain=TPM 16.9

organism_name: Pediococcus pentosaceus


infraspecific_name: strain=TPM 14.2

organism_name: Lactiplantibacillus plantarum


asm_submitter: North-West University

organism_name: Citrobacter braakii


asm_submitter: Centers for Disease Control, Taiwan

organism_name: Salmonella enterica


asm_submitter: Academician I.N.Blokhina Nizhny Novgorod Scientific Research Institute of Epidemiology and Microbiol

organism_name: Salmonella enterica subsp. enterica


asm_submitter: German Federal Institute for Risk Assessment


asm_submitter: Huzhou center for disease control and prevention


excluded_from_refseq: contaminated; from large multi-isolate project


organism_name: Enterobacter hormaechei


asm_submitter: Zhejiang Provincial People's Hospital


organism_name: Klebsiella aerogenes


asm_submitter: Technical University of Denmark

organism_name: Fructobacillus fructosus


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Enterobacter cloacae


organism_name: Apilactobacillus kunkeei


organism_name: Leuconostoc pseudomesenteroides


organism_name: Leuconostoc suionicum


asm_submitter: National Center for Biotechnology Information


organism_name: Campylobacter coli


asm_submitter: Universidade Federal de Pelotas

infraspecific_name: strain=1C MS

organism_name: Leptospira interrogans


infraspecific_name: strain=2C MS


infraspecific_name: strain=3B WS


infraspecific_name: strain=7C MS


infraspecific_name: strain=5C MS

organism_name: Leptospira santarosai


infraspecific_name: strain=9C MS


infraspecific_name: strain=4C MS

organism_name: Leptospira kirschneri


infraspecific_name: strain=1B WS


infraspecific_name: strain=3C MS


infraspecific_name: strain=8A MS


infraspecific_name: strain=4A MS


infraspecific_name: strain=3A WS


infraspecific_name: strain=2A MS


infraspecific_name: strain=5B MS


infraspecific_name: strain=2B MS


infraspecific_name: strain=1A MS


infraspecific_name: strain=9A MS


organism_name: Campylobacter jejuni


asm_submitter: Seoul National University

infraspecific_name: strain=SLAM-BBNH

organism_name: Bifidobacterium breve


asm_submitter: Ho Chi Minh City University of Technology (HCMUT), VNU-HCM

organism_name: Lactiplantibacillus plantarum


asm_submitter: Key Laboratory of Jilin Province for Zoonosis Prevention and Control

organism_name: Escherichia coli


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


asm_submitter: Health Protection Agency


asm_submitter: CDC


asm_submitter: Centers for Disease Control and Prevention


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Kiambu


organism_name: Vibrio cholerae


organism_name: Pseudomonas aeruginosa


organism_name: Klebsiella pneumoniae


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: FDA

organism_name: Campylobacter coli


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. enterica serovar Chester


asm_submitter: Chulalongkorn University


organism_name: Acinetobacter baumannii


asm_submitter: Institute of Bioengineering, Research Center of Biotechnology of RAS

organism_name: Citrobacter portucalensis


organism_name: Enterobacter hormaechei


organism_name: Salmonella enterica subsp. enterica serovar London


organism_name: Escherichia coli


asm_submitter: University of British Columbia

organism_name: Cereibacter changlensis


asm_submitter: DaLian MinZu University

organism_name: Bacillus velezensis


asm_submitter: USDA

organism_name: Flavobacterium columnare


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Klebsiella pneumoniae


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Alachua


organism_name: Listeria monocytogenes


organism_name: Vibrio cholerae


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Liverpool


organism_name: Escherichia coli