annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: National Center for Biotechnology Information

assembly_level: Contig

assembly_type: haploid

excluded_from_refseq: from large multi-isolate project

genome_rep: Full

group: bacteria

organism_name: Shigella sonnei

release_type: Major

version_status: latest


organism_name: Shigella flexneri


organism_name: Shigella boydii


organism_name: Streptococcus pyogenes


organism_name: Vibrio cholerae


organism_name: Escherichia coli


asm_submitter: Health Protection Agency


asm_submitter: FACULTY OF SCIENCE, UNIVERSITI TEKNOLOGI MALAYSIA

assembly_level: Complete Genome

organism_name: Hanstruepera sp. CR43

paired_asm_comp: identical


asm_submitter: Texas A&M University

organism_name: Burkholderia multivorans


asm_submitter: Infection Biology Lab, University of Dhaka

organism_name: Staphylococcus epidermidis


asm_submitter: National Yang Ming Chiao Tung University

organism_name: Klebsiella michiganensis


organism_name: Bacillus subtilis


organism_name: Klebsiella pasteurii


asm_submitter: University of Pretoria

organism_name: Bradyrhizobium sp. Leo114


asm_submitter: Los Angeles County Public Health Lab microbial pathogen submission group

organism_name: Klebsiella pneumoniae


organism_name: Acinetobacter baumannii


organism_name: Neisseria gonorrhoeae


organism_name: Neisseria meningitidis


organism_name: Streptococcus pneumoniae


organism_name: Burkholderia dolosa


organism_name: Legionella pneumophila


organism_name: Streptococcus pyogenes


organism_name: Corynebacterium diphtheriae


organism_name: Escherichia coli


asm_submitter: National Institute for Communicable Disease Control and Prevention

organism_name: Rhodococcus quanlei


organism_name: Bradyrhizobium sp. LeoB1S2


organism_name: Rhodococcus ruitaii

refseq_category: reference genome


relation_to_type_material: assembly from type material


asm_submitter: Taylor's University Lakeside Campus

organism_name: Metapseudomonas otitidis


organism_name: Rhodococcus huquni


asm_submitter: National Sun Yat-sen University

organism_name: Acinetobacter radioresistens


asm_submitter: The Second Affiliated Hospital of Zhejiang University School of Medicine, Zhejiang University

assembly_level: Scaffold

organism_name: Pseudomonas mosselii


asm_submitter: Hannam University

infraspecific_name: strain=KCTC 52808

organism_name: Flavobacterium niveum


infraspecific_name: strain=KCTC 52444

organism_name: Flavobacterium riviphilum


asm_submitter: Northeast Agricultural University

organism_name: Streptomyces niveus


asm_submitter: New Zealand Forest Research Institute

organism_name: Methylobacterium sp. Ger2507


organism_name: Leifsonia sp. Ger2509


organism_name: Sphingomonas sp. Ell38C01


organism_name: Streptomyces sp. Tek67B01


organism_name: Nocardia sp. Tas62D01


asm_submitter: UAM

organism_name: Streptomyces diastaticus


organism_name: Escherichia coli


organism_name: Pseudonocardia sp. PLev92G01


asm_submitter: University of Wisconsin-Madison

organism_name: Aliivibrio fischeri


asm_submitter: Southwest Medical University


organism_name: Klebsiella michiganensis


asm_submitter: West China Hospital, Sichuan University

organism_name: Klebsiella pneumoniae


organism_name: Enterobacter hormaechei


organism_name: Enterobacter ludwigii


asm_submitter: Instituto Oswaldo Cruz

organism_name: Pseudomonas aeruginosa


asm_submitter: Northwestern University Feinberg School of Medicine


asm_submitter: Beijing Normal University

organism_name: Vibrio parahaemolyticus


asm_submitter: University of Nottingham


asm_submitter: Korea University


asm_submitter: WUHAN

organism_name: Bacteroides thetaiotaomicron


asm_submitter: Nnamdi Azikiwe University/Uzobiogene Genomics


asm_submitter: Huazhong Agricultural University

organism_name: Lactiplantibacillus pentosus


asm_submitter: Research and Production Center for Microbiology and Virology

organism_name: Actinoalloteichus caeruleus


asm_submitter: National Center for Biotechnology Information


asm_submitter: General University Hospital of Larissa


asm_submitter: Texas A&M University

organism_name: Burkholderia multivorans


organism_name: Lactiplantibacillus plantarum


asm_submitter: Tarim University

organism_name: Bacillus stercoris


organism_name: Bacillus velezensis


asm_submitter: National Yang Ming Chiao Tung University


organism_name: Neisseria gonorrhoeae


asm_submitter: FDA

organism_name: Campylobacter coli


organism_name: Salmonella enterica


organism_name: Campylobacter jejuni


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


organism_name: Escherichia coli


excluded_from_refseq: contaminated; from large multi-isolate project


organism_name: Providencia rettgeri


asm_submitter: University of Pretoria

organism_name: Bradyrhizobium sp. KZN70725


asm_submitter: University of Balochistan Quetta

organism_name: Staphylococcus aureus


annotation_name: Annotation submitted by Democritus University of Thrace

annotation_provider: Democritus University of Thrace

asm_submitter: Infrastructure of Microbiome Applications in Food Systems-FOODBIOMES

organism_name: Lactococcus cremoris


asm_submitter: Xi'an Jiaotong University

organism_name: Methylotuvimicrobium sp. NG09


asm_submitter: National Agriculture and Food Research Organization


asm_submitter: Gazipur Agricultural University

organism_name: Bacillus thuringiensis


organism_name: Vibrio parahaemolyticus


organism_name: Enterococcus faecalis


asm_submitter: Anhui Normal University

group: archaea

organism_name: Haloarcula sp. HT12


asm_submitter: University of Helsinki

organism_name: Latilactobacillus sp. Mkasi1-1


organism_name: Latilactobacillus sp. Mkahm2-6


asm_submitter: Northern Arizona University

infraspecific_name: strain=BrDuraA

organism_name: Clostridium botulinum


asm_submitter: Public Health England


asm_submitter: National Center for Biotechnology Information


organism_name: Campylobacter coli


asm_submitter: Health Protection Agency

organism_name: Listeria monocytogenes


organism_name: Shigella flexneri


asm_submitter: Shanxi Medical College


asm_submitter: Fundacao Oswaldo Cruz

organism_name: Nocardioides sp. B129/18


asm_submitter: National University of Singapore

organism_name: Marinobacter alkaliphilus


asm_submitter: University of Calcutta

organism_name: Staphylococcus cohnii


asm_submitter: University of Nevada - Las Vegas

organism_name: Bacillus subtilis subsp. subtilis


asm_submitter: New Zealand Institute for Plant and Food Research

organism_name: Pseudomonas sp. HP_15


organism_name: Pseudomonas sp. HP_14


organism_name: Pseudomonas viridiflava


organism_name: Pseudomonas sp. HP_12


organism_name: Pseudomonas syringae


organism_name: Pseudomonas sp. HP_09


organism_name: Pseudomonas sp. HP_08


organism_name: Pseudomonas amygdali


organism_name: Escherichia coli


organism_name: Pseudomonas cichorii


organism_name: Pseudomonas sp. HP_01


organism_name: Vibrio parahaemolyticus


asm_submitter: University of Wyoming

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins


asm_submitter: National Research and Innovation Agency

organism_name: Pediococcus acidilactici


asm_submitter: Academia Sinica

infraspecific_name: strain=K-12 substr. W3110

organism_name: Escherichia coli str. K-12 substr. W3110


asm_submitter: Huazhong Agricultural University,

organism_name: Campylobacter coli


asm_submitter: Korea Research Institute of Bioscience and Biotechnology (KRIBB)

infraspecific_name: strain=KCTC 35027

organism_name: Senimuribacter intestinalis


asm_submitter: Chulalongkorn University

organism_name: Micromonospora aurantiaca (nom. illeg.)


asm_submitter: Sri Ramachandra Institute of Higher Education and Research


asm_submitter: University of Mosul

organism_name: Pseudomonas aeruginosa


asm_submitter: Tsinghua University Shenzhen International Graduate School

infraspecific_name: strain=MTCC 5856

organism_name: Heyndrickxia faecalis


asm_submitter: Anhui Normal University

organism_name: Vibrio plantisponsor


organism_name: Vibrio fluvialis


asm_submitter: Guizhou University of Traditional Chinese Medicine

organism_name: Rothia sp. 18CD1-1


asm_submitter: Institute for Cellular and Intracellular Symbiosis UB RAS


asm_submitter: National Center for Biotechnology Information


asm_submitter: Shanxi Medical College


asm_submitter: Pontificia Universidad Catolica de Chile

organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Neisseria gonorrhoeae


organism_name: Listeria monocytogenes


asm_submitter: FDA/CFSAN


asm_submitter: Center for Food Safety and Applied Nutrition

organism_name: Salmonella enterica


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


asm_submitter: CDC

organism_name: Escherichia coli


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Bredeney


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Reading


asm_submitter: Chinese Center for Disaease Control and Prevention

infraspecific_name: strain=fuxiezhaoxin

organism_name: Escherichia albertii


asm_submitter: King Abdullah University of Science and Technology

organism_name: Bacillus sp. PK3-045


asm_submitter: SUPSI

infraspecific_name: strain=LCAD

organism_name: Pelodictyon clathratiforme


asm_submitter: Southern Nevada Water Authority

organism_name: Legionella pneumophila


asm_submitter: New York State Dept. of Health - Wadsworth Center


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Klebsiella pneumoniae


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter fetus


asm_submitter: Pathogen Biology Laboratory, University of Hyderabad


organism_name: Shigella flexneri


organism_name: Campylobacter jejuni


organism_name: Haemophilus influenzae


organism_name: Escherichia coli


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Acinetobacter baumannii


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Listeria monocytogenes


isolate: Legionella pneumophila serogroup 1

organism_name: Legionella pneumophila


organism_name: Shigella dysenteriae


organism_name: Enterobacter hormaechei


organism_name: Shigella boydii


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Klebsiella pneumoniae


organism_name: Klebsiella aerogenes


organism_name: Escherichia coli


organism_name: Shigella flexneri


organism_name: Klebsiella variicola


organism_name: Shigella sonnei


asm_submitter: FDA-CVM

organism_name: Vibrio parahaemolyticus


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Pseudomonas aeruginosa


asm_submitter: National Center for Biotechnology Information


organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


asm_submitter: Shanxi Medical University

organism_name: Tessaracoccus sp. Y1544


organism_name: Tessaracoccus sp. Y1940


organism_name: Tessaracoccus sp. W1776


organism_name: Tessaracoccus sp. Y1639


asm_submitter: Instituto Tecnologico Superior de Abasolo

excluded_from_refseq: many frameshifted proteins

organism_name: Bacillus cereus


asm_submitter: Chulalongkorn University

organism_name: Streptomyces sp. C-120


organism_name: Georgenia sp. Z2081


organism_name: Georgenia sp. G2120


organism_name: Georgenia sp. Z2054


asm_submitter: Yili Normal University

organism_name: Bacillus subtilis


asm_submitter: Dali University

organism_name: Streptomyces sp. BPA100


asm_submitter: INNER MINGOLIA MINZU UNIVERSITY

infraspecific_name: strain=NM

organism_name: Mannheimia indoligenes


asm_submitter: Dongguk university

organism_name: Pleionea sp. WD8-19


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Acinetobacter baumannii


organism_name: Alteromonas sp. WD8-37


asm_submitter: Vaginal Microbiome Research Consortium

organism_name: Gardnerella sp. C0684A1


asm_submitter: Huazhong Agricultural University

organism_name: Bacteroides ovatus


organism_name: Enterococcus faecium


organism_name: Staphylococcus aureus


organism_name: Escherichia coli


organism_name: Bacteroides uniformis


organism_name: Bacteroides stercoris


organism_name: Parabacteroides distasonis


organism_name: Bacteroides xylanisolvens


asm_submitter: CDC

organism_name: Shigella flexneri


asm_submitter: FDA


infraspecific_name: strain=BXY


asm_submitter: Chinese Academy of Agricultural Sciences

organism_name: Klebsiella pasteurii


organism_name: Kosakonia pseudosacchari


asm_submitter: Shandong University of Technology

organism_name: Microbacterium sp. ZXT2-5


organism_name: Virgibacillus sp. GM2-2


asm_submitter: Instituto Oswaldo Cruz

organism_name: Pseudomonas aeruginosa


asm_submitter: Anhui Normal University

organism_name: Vibrio parahaemolyticus


asm_submitter: National Center for Biotechnology Information

organism_name: Acinetobacter baumannii


organism_name: Vibrio furnissii


asm_submitter: Bangladesh Agricultural University


asm_submitter: St. Xavier's College (Autonomous), Kolkata


asm_submitter: Chulalongkorn University

organism_name: Shinella sp. R2-11


asm_submitter: Pukyong national university

organism_name: Clostridium sp. LS3


organism_name: Acinetobacter nosocomialis


organism_name: Escherichia coli


organism_name: Streptococcus suis


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Salmonella enterica


organism_name: Shigella sonnei


asm_submitter: Health Protection Agency

organism_name: Listeria monocytogenes


asm_submitter: Public Health England

organism_name: Yersinia enterocolitica


organism_name: Vibrio cholerae


asm_submitter: FDA/CFSAN

organism_name: Cronobacter sakazakii


organism_name: Salmonella enterica subsp. enterica serovar Brandenburg


organism_name: Cronobacter malonaticus


organism_name: Cronobacter universalis


organism_name: Shigella flexneri


organism_name: Streptococcus pyogenes


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


organism_name: Salmonella enterica subsp. enterica


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Bredeney


organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Escherichia coli


organism_name: Shigella sonnei


organism_name: Acinetobacter baumannii


organism_name: Salmonella enterica


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


organism_name: Klebsiella pneumoniae


infraspecific_name: strain=SPN

organism_name: Streptococcus pneumoniae


organism_name: Shigella boydii


organism_name: Staphylococcus aureus


organism_name: Campylobacter jejuni


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: CDC

organism_name: Shigella flexneri


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Legionella pneumophila


organism_name: Streptococcus pyogenes


organism_name: Neisseria meningitidis


organism_name: Clostridium botulinum


organism_name: Campylobacter upsaliensis


asm_submitter: FDA

organism_name: Escherichia coli


asm_submitter: FDA-CVM

organism_name: Aeromonas salmonicida


organism_name: Yersinia enterocolitica


organism_name: Enterobacter bugandensis


organism_name: Klebsiella pneumoniae


organism_name: Pseudomonas aeruginosa


organism_name: Salmonella enterica


organism_name: Enterobacter hormaechei


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Shigella sonnei


organism_name: Streptococcus pneumoniae


organism_name: Listeria monocytogenes


organism_name: Shigella flexneri


organism_name: Legionella pneumophila


infraspecific_name: strain=Non-O1 Non-O139

organism_name: Vibrio cholerae


organism_name: Acinetobacter baumannii


organism_name: Vibrio parahaemolyticus


isolate: isolated from the intra-tumoral microbiota of bladder cancer patients


organism_name: Escherichia coli


organism_name: Streptococcus pyogenes


organism_name: Campylobacter coli


organism_name: Clostridium sporogenes


organism_name: Vibrio alginolyticus


organism_name: Klebsiella pneumoniae


organism_name: Pseudomonas aeruginosa


organism_name: Campylobacter jejuni


organism_name: Enterobacter hormaechei subsp. hormaechei


organism_name: Enterobacter hormaechei subsp. oharae


organism_name: Enterobacter hormaechei subsp. hoffmannii


organism_name: Enterobacter hormaechei


organism_name: Campylobacter lari


organism_name: Legionella pneumophila


organism_name: Legionella anisa


asm_submitter: Public Health Agency of Canada

organism_name: Salmonella enterica subsp. enterica serovar Lome


organism_name: Salmonella enterica


organism_name: Escherichia coli


organism_name: Shigella flexneri


organism_name: Shigella sonnei


asm_submitter: Bose Institute

organism_name: Microbacterium sp. TW_SC_2


organism_name: Arthrobacter sp. TRD_SC_6


asm_submitter: Federal University of Sao Paulo

organism_name: Myxococcus faecalis


organism_name: Mycetocola sp. TRD_SC_2


organism_name: Sanguibacter sp. TS_SC_8


organism_name: Pseudarthrobacter sp. TRD_SC_9


asm_submitter: 2nd Faculty of Medicine and Motol University Hospital

organism_name: Clostridioides difficile


asm_submitter: Victoria University of Wellington

organism_name: Novosphingobium sp. TK71


organism_name: Novosphingobium sp. TK46


organism_name: Methylobacterium sp. TK31


organism_name: Methylobacterium sp. TK26


asm_submitter: Binghamton University - State University of New York

assembly_level: Chromosome

organism_name: Streptococcus pyogenes


asm_submitter: Cultivarium

infraspecific_name: strain=DSM 112585

organism_name: Pseudideonella sakaiensis


asm_submitter: UKM Medical Molecular Biology Institute (UMBI)


asm_submitter: Hirosaki University

organism_name: Loigolactobacillus coryniformis


asm_submitter: microbialARC

organism_name: Staphylococcus aureus


asm_submitter: Children's Hospital of Philadelphia

excluded_from_refseq: derived from metagenome


asm_submitter: German Federal Institute for Risk Assessment

organism_name: Proteus mirabilis


asm_submitter: Novonesis

infraspecific_name: strain=CCUG 44494

organism_name: Lactobacillus fornicalis


asm_submitter: Sun Yat-sen University

infraspecific_name: strain=SYSU B005

organism_name: Micromonospora sp. SYSU B005


excluded_from_refseq: fragmented assembly; from large multi-isolate project


asm_submitter: Public Health England

organism_name: Campylobacter jejuni


organism_name: Yersinia enterocolitica


organism_name: Salmonella enterica subsp. enterica serovar Newport


organism_name: Salmonella enterica subsp. enterica serovar Bareilly


organism_name: Salmonella enterica subsp. enterica


asm_submitter: Health Protection Agency

organism_name: Escherichia coli


organism_name: Shigella sonnei


organism_name: Shigella flexneri


organism_name: Shigella boydii


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


asm_submitter: National Center for Biotechnology Information

organism_name: Neisseria gonorrhoeae


asm_submitter: CDC


asm_submitter: Centers for Disease Control and Prevention


annotation_name: Annotation submitted by ONE HEALTH SCIENTIFIC AND RESEARCH INSTITUTE

infraspecific_name: strain=UA-A

organism_name: Serratia liquefaciens


annotation_name: Annotation submitted by Department of Bacteriology I, National Institute of Infectious Diseases


annotation_name: Annotation submitted by Gifu University Center for Conservation of Microbial Genetic Resource, GCMR

organism_name: Desulfovibrio legallii


organism_name: Campylobacter upsaliensis


annotation_name: Annotation submitted by RIKEN-BRC

annotation_provider: RIKEN-BRC

asm_submitter: RIKEN-BRC

infraspecific_name: strain=JCM 17269

organism_name: Halovenus rubra


infraspecific_name: strain=JCM 10003

organism_name: Bacteroides pyogenes

relation_to_type_material: assembly from heterotypic synonym type material


annotation_name: Annotation submitted by Research Center for Infectious Disease, Okinawa Prefectural Institute of Health and Environment


annotation_name: Annotation submitted by Faculty of Life and Environmental Sciences, University of Yamanashi

excluded_from_refseq: genus undefined

organism_name: Polyangiales bacterium MRC-1


annotation_name: Annotation submitted by National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 311901

organism_name: Ralstonia pseudosolanacearum


infraspecific_name: strain=JCM 15827

organism_name: Desulfurispirillum alkaliphilum


infraspecific_name: strain=JCM 30480

organism_name: Brassicibacter thermophilus


annotation_name: Annotation submitted by University of Miyazaki

annotation_provider: University of Miyazaki

asm_submitter: University of Miyazaki

organism_name: Lactococcus formosensis


annotation_name: Annotation submitted by Microbiology, Allied Health Ssciences, Kitasato university

organism_name: Staphylococcus aureus


annotation_name: Annotation submitted by Department of Marine Bioscience Atomosphere and Ocean Research Institute, The University of Tokyo

organism_name: Maribacter sp. C-4077


organism_name: Escherichia coli


annotation_name: Annotation submitted by Hiroshima University

annotation_provider: Hiroshima University

asm_submitter: Hiroshima University


annotation_name: Annotation submitted by Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)

organism_name: Bradyrhizobium diazoefficiens


annotation_name: Annotation submitted by Gifu University

annotation_provider: Gifu University

asm_submitter: Gifu University

organism_name: Bifidobacterium porcinum


annotation_name: Annotation submitted by Tohoku Medical Megabank Organization, Tohoku University

organism_name: Phyllobacterium sp. T2-21


annotation_name: Annotation submitted by WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)

infraspecific_name: strain=JCM 4838

organism_name: Streptoalloteichus tenebrarius


annotation_provider: ONE HEALTH SCIENTIFIC AND RESEARCH INSTITUTE

organism_name: Enterobacter hormaechei


annotation_provider: Department of Bacteriology I, National Institute of Infectious Diseases


annotation_name: Annotation submitted by Department of Engineering, Graduate School of Integrated Science and Technology, Shizuoka University

organism_name: Pseudomonas inefficax


infraspecific_name: strain=JCM 17117

organism_name: Halorubellus litoreus


infraspecific_name: strain=JCM 9808

organism_name: Cellulomonas sp. JCM 9808


annotation_provider: Research Center for Infectious Disease, Okinawa Prefectural Institute of Health and Environment


annotation_name: Annotation submitted by Graduate School of Integrated sciences for Life, Hiroshima University

organism_name: Bacillus subtilis


annotation_provider: National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 311900


infraspecific_name: strain=JCM 15047

organism_name: Thiobacillus thiophilus


infraspecific_name: strain=JCM 19912

organism_name: Fusibacter fontis


annotation_name: Annotation submitted by RIKEN Center for Biosystems Dynamics Research

organism_name: Candidatus Kurthia intestinigallinarum


annotation_name: Annotation submitted by Department of Microbiology, Matsumoto Dental University

organism_name: Streptococcus pyogenes


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)


annotation_provider: Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)


annotation_name: Annotation submitted by Division of Microbiology, National Institute of Health Sciences


annotation_provider: Tohoku Medical Megabank Organization, Tohoku University

organism_name: Pseudoxanthomonas japonensis


annotation_provider: WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)

infraspecific_name: strain=JCM 4248

organism_name: Saccharothrix mutabilis subsp. capreolus


annotation_provider: Graduate School of Integrated sciences for Life, Hiroshima University


asm_submitter: National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 106256

organism_name: Ralstonia pseudosolanacearum


annotation_name: Annotation submitted by RIKEN-BRC

infraspecific_name: strain=JCM 31105

organism_name: Desulfosporosinus nitroreducens


infraspecific_name: strain=JCM 30191

organism_name: Breznakia pachnodae


annotation_name: Annotation submitted by Nagoya Institute of Technology

annotation_provider: Nagoya Institute of Technology

asm_submitter: Nagoya Institute of Technology

organism_name: Desulfitobacterium elongatum


annotation_name: Annotation submitted by Insect control lab, National Agriculture and Food Research Organization

organism_name: Wolbachia pipientis


annotation_name: Annotation submitted by Microbiology, Pharmaceutical Sciences, Toho University

organism_name: Actinoplanes kirromycinicus


asm_submitter: Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)

organism_name: Bradyrhizobium diazoefficiens


annotation_name: Annotation submitted by Antimicrobial Resistance Research Center, National Institute of Infectious Diseases

organism_name: Pseudomonas aeruginosa


asm_submitter: Tohoku Medical Megabank Organization, Tohoku University

organism_name: Paenibacillus polymyxa


asm_submitter: WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)

infraspecific_name: strain=JCM 2521

organism_name: Pseudarthrobacter oxydans


annotation_name: Annotation submitted by ONE HEALTH SCIENTIFIC AND RESEARCH INSTITUTE

organism_name: Enterobacter hormaechei


annotation_name: Annotation submitted by Department of Bacteriology I, National Institute of Infectious Diseases

organism_name: Escherichia coli


infraspecific_name: strain=JCM 32284

organism_name: Virgibacillus kimchii


infraspecific_name: strain=JCM 16981

organism_name: Salinicoccus jeotgali


excluded_from_refseq: unverified source organism

infraspecific_name: strain=JCM 9805

organism_name: Rhodococcus erythropolis


annotation_name: Annotation submitted by Research Center for Infectious Disease, Okinawa Prefectural Institute of Health and Environment


annotation_name: Annotation submitted by Hokkaido University

annotation_provider: Hokkaido University

asm_submitter: Hokkaido University

organism_name: Thiovibrio sp. Mzg5


asm_submitter: ONE HEALTH SCIENTIFIC AND RESEARCH INSTITUTE

organism_name: Enterobacter hormaechei subsp. hoffmannii


asm_submitter: Department of Bacteriology I, National Institute of Infectious Diseases


infraspecific_name: strain=JCM 31939

organism_name: Natronobiforma cellulositropha


infraspecific_name: strain=JCM 16927

organism_name: Cellulomonas chitinilytica JCM 16927


infraspecific_name: strain=JCM 9804


asm_submitter: Research Center for Infectious Disease, Okinawa Prefectural Institute of Health and Environment


annotation_name: Annotation submitted by Aoi Laboratory Program of Biotechnology Graduate School of Integrated Sciences for Life, Hiroshima University

organism_name: Leucogemmata humicola


annotation_name: Annotation submitted by National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 311899

organism_name: Ralstonia pseudosolanacearum


infraspecific_name: strain=JCM 12421

organism_name: Thiobacter subterraneus


infraspecific_name: strain=JCM 18213

organism_name: Halanaerobium sehlinense


annotation_name: Annotation submitted by University of Tsukuba

annotation_provider: University of Tsukuba

asm_submitter: University of Tsukuba

organism_name: Shinella sp. 1A1


annotation_provider: NCBI

asm_submitter: National Center for Biotechnology Information


annotation_provider: Insect control lab, National Agriculture and Food Research Organization

organism_name: Wolbachia pipientis


annotation_name: Annotation submitted by Department of Marine Biosciences, Tokyo University of Marine Science and Technology

organism_name: Tenacibaculum mesophilum


annotation_name: Annotation submitted by Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)

organism_name: Bradyrhizobium diazoefficiens


annotation_name: Annotation submitted by RIKEN BioResource Research Center

annotation_provider: RIKEN BioResource Research Center

asm_submitter: RIKEN BioResource Research Center

excluded_from_refseq: contaminated

organism_name: Waltera intestinalis


annotation_name: Annotation submitted by Tokyo University of Science

annotation_provider: Tokyo University of Science

asm_submitter: Tokyo University of Science

organism_name: Delftia tsuruhatensis


annotation_name: Annotation submitted by WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)

infraspecific_name: strain=JCM 1378

organism_name: Microbacterium imperiale


annotation_name: Annotation submitted by RIKEN-BRC

annotation_provider: RIKEN-BRC

asm_submitter: RIKEN-BRC

infraspecific_name: strain=JCM 16914

organism_name: Halomonas cibimaris


infraspecific_name: strain=JCM 9796

organism_name: Paenibacillus sp. JCM 9796


annotation_name: Annotation submitted by Juntendo university

annotation_provider: Juntendo university

asm_submitter: Juntendo university

organism_name: Morganella morganii


infraspecific_name: strain=MAFF 311898


infraspecific_name: strain=JCM 9392

organism_name: Pyrodictium brockii


infraspecific_name: strain=JCM 17581

organism_name: Roseburia faecis


annotation_name: Annotation submitted by Laboratory of Soil and Environmental Microbiology Department of Bioscience and Biotechnology Faculty of Agriculture, Kyushu university

infraspecific_name: strain=JCM 15949

organism_name: Levilactobacillus acidifarinae DSM 19394 = JCM 15949


asm_submitter: National Institute of Infectious Diseases

organism_name: Staphylococcus aureus


annotation_name: Annotation submitted by Kanagawa Prefectural Institute of Public Health

organism_name: Legionella pneumophila


infraspecific_name: strain=JCM 3366

organism_name: Actinomadura rugatobispora


annotation_name: Annotation submitted by Gifu University

annotation_provider: Gifu University

asm_submitter: Gifu University

organism_name: Prevotella mikamonis


annotation_provider: Department of Marine Biosciences, Tokyo University of Marine Science and Technology


annotation_name: Annotation submitted by Laboratory of Bacterial Genomics, Pathogen Genomics Center, National Institute of Infectious Diseases

organism_name: Enterobacter asburiae


annotation_name: Annotation submitted by ONE HEALTH SCIENTIFIC AND RESEARCH INSTITUTE

organism_name: Enterobacter hormaechei subsp. hoffmannii


annotation_name: Annotation submitted by Department of Bacteriology I, National Institute of Infectious Diseases

organism_name: Escherichia coli


infraspecific_name: strain=JCM 31343

organism_name: Longimonas haloalkaliphila


organism_name: Bradyrhizobium diazoefficiens


annotation_name: Annotation submitted by Department of Material and Environmental Chemistry, Graduate School of Engineering, Utsunomiya University

infraspecific_name: strain=MAFF 301393

organism_name: Pectobacterium carotovorum


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)


asm_submitter: CDC

organism_name: Shigella flexneri


annotation_provider: ONE HEALTH SCIENTIFIC AND RESEARCH INSTITUTE

organism_name: Serratia liquefaciens


asm_submitter: FDA


annotation_provider: Department of Bacteriology I, National Institute of Infectious Diseases


infraspecific_name: strain=JCM 31342

organism_name: Natronotalea proteinilytica


infraspecific_name: strain=JCM 16592

organism_name: Halostagnicola alkaliphila


infraspecific_name: strain=JCM 9795

organism_name: Paenibacillus sp. JCM 9795


annotation_name: Annotation submitted by Research Center for Infectious Disease, Okinawa Prefectural Institute of Health and Environment


annotation_name: Annotation submitted by Marine Resource Science, Kochi University

organism_name: Edwardsiella tarda


annotation_name: Annotation submitted by National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 311897

organism_name: Ralstonia pseudosolanacearum


infraspecific_name: strain=JCM 32836

organism_name: Desulfosporomusa polytropa


infraspecific_name: strain=JCM 17205

organism_name: Blautia faecis


annotation_name: Annotation submitted by Genetic Resources Center, National Agriculture and Food Research Organization

organism_name: Pseudomonas allii


annotation_name: Annotation submitted by Genetic engineering  Graduate school of Environmental and Life Sciences, Okayama University

organism_name: Pseudomonas amygdali pv. tabaci


organism_name: Prevotella mikamonis


annotation_name: Annotation submitted by Gifu University Center for Conservation of Microbial Genetic Resource, (GCMR)

organism_name: Pigmentibacter ruber


annotation_name: Annotation submitted by Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)


annotation_provider: Kanagawa Prefectural Institute of Public Health

organism_name: Legionella pneumophila


organism_name: Escherichia coli


annotation_name: Annotation submitted by Tokyo university of agriculture and technology

organism_name: Picosynechococcus sp. NKBG15041c


asm_submitter: Antimicrobial Resistance Research Center, National Institute of Infectious Diseases


annotation_name: Annotation submitted by National Institute of Infectious Diseases

organism_name: Bordetella pertussis


organism_name: Enterobacter hormaechei


annotation_name: Annotation submitted by RIKEN-BRC

infraspecific_name: strain=JCM 30955

organism_name: Halorubrum pallidum


organism_name: Nocardioides sp. DN36


infraspecific_name: strain=JCM 9793

organism_name: Rhodococcus sp. JCM 9793


annotation_provider: Research Center for Infectious Disease, Okinawa Prefectural Institute of Health and Environment


annotation_name: Annotation submitted by Nagaoka University of Technology

annotation_provider: Nagaoka University of Technology

asm_submitter: Nagaoka University of Technology

organism_name: Puribacter membranae


annotation_provider: National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 311896


infraspecific_name: strain=JCM 15416

organism_name: Methanobacterium flexile


infraspecific_name: strain=JCM 13368

organism_name: Mediterraneibacter glycyrrhizinilyticus


annotation_provider: Genetic Resources Center, National Agriculture and Food Research Organization

infraspecific_name: strain=YM 7702


annotation_name: Annotation submitted by Graduate School of Integrated sciences for Life, Hiroshima University

organism_name: Enterobacter roggenkampii


annotation_name: Annotation submitted by Gifu University


annotation_name: Annotation submitted by Department of microbiology, Tokyo Metropolitan Institute of Public Health

organism_name: Streptococcus pneumoniae


organism_name: Haemophilus influenzae


annotation_provider: Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)

organism_name: Bradyrhizobium diazoefficiens


annotation_name: Annotation submitted by Kanagawa Prefectural Institute of Public Health


annotation_name: Annotation submitted by Haemophilus influenzae

annotation_provider: Haemophilus influenzae

asm_submitter: Haemophilus influenzae


annotation_name: Annotation submitted by Department of Material and Environmental Chemistry, Graduate School of Engineering, Utsunomiya University

infraspecific_name: strain=MAFF 730105

organism_name: Pseudomonas sp. MAFF 730105


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI


annotation_name: Annotation submitted by ONE HEALTH SCIENTIFIC AND RESEARCH INSTITUTE

organism_name: Serratia liquefaciens


annotation_name: Annotation submitted by Department of Bacteriology I, National Institute of Infectious Diseases


infraspecific_name: strain=JCM 30907

organism_name: Virgibacillus ainsalahensis


infraspecific_name: strain=JCM 16370

organism_name: Mycolicibacterium pallens


infraspecific_name: strain=JCM 9791

organism_name: Rhodococcus sp. JCM 9791


annotation_name: Annotation submitted by Research Center for Infectious Disease, Okinawa Prefectural Institute of Health and Environment

organism_name: Escherichia coli


annotation_name: Annotation submitted by National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 311895

organism_name: Ralstonia pseudosolanacearum


infraspecific_name: strain=JCM 11468

organism_name: Thermovibrio ruber


infraspecific_name: strain=JCM 12261

organism_name: Streptococcus pasteurianus


annotation_name: Annotation submitted by Genetic Resources Center, National Agriculture and Food Research Organization

infraspecific_name: strain=NL 7843

organism_name: Pseudomonas allii


annotation_name: Annotation submitted by Insect control lab, National Agriculture and Food Research Organization

infraspecific_name: strain=wFem

organism_name: Wolbachia pipientis


organism_name: Prevotella mikamonis


annotation_provider: Department of microbiology, Tokyo Metropolitan Institute of Public Health


annotation_name: Annotation submitted by Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)


asm_submitter: Kanagawa Prefectural Institute of Public Health

organism_name: Legionella pneumophila


annotation_name: Annotation submitted by Osaka Metropolitan University

annotation_provider: Osaka Metropolitan University

asm_submitter: Osaka Metropolitan University

organism_name: Acinetobacter baumannii


asm_submitter: ONE HEALTH SCIENTIFIC AND RESEARCH INSTITUTE

organism_name: Enterobacter hormaechei


annotation_name: Annotation submitted by RIKEN-BRC

infraspecific_name: strain=JCM 30665

organism_name: Halorubrum yunnanense


infraspecific_name: strain=JCM 16369

organism_name: Mycolicibacterium crocinum


infraspecific_name: strain=JCM 9787

organism_name: Achromobacter xylosoxidans


asm_submitter: National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 311800


infraspecific_name: strain=MAFF 311894


infraspecific_name: strain=JCM 15797

organism_name: Methanobacterium kanagiense


infraspecific_name: strain=JCM 17260

organism_name: Thermosyntropha tengcongensis


asm_submitter: Genetic Resources Center, National Agriculture and Food Research Organization


asm_submitter: National Center for Biotechnology Information


annotation_name: Annotation submitted by Graduate School of Human Life and Ecology, Osaka Metropolitan University

organism_name: Mycobacterium shinjukuense


asm_submitter: Department of microbiology, Tokyo Metropolitan Institute of Public Health

organism_name: Streptococcus pneumoniae


asm_submitter: Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)

organism_name: Bradyrhizobium diazoefficiens


annotation_name: Annotation submitted by United Graduate School of Veterinary Sciences, Gifu University

organism_name: Escherichia coli


asm_submitter: Department of Bacteriology I, National Institute of Infectious Diseases


asm_submitter: RIKEN-BRC

infraspecific_name: strain=JCM 30442

organism_name: Haloparvum alkalitolerans


infraspecific_name: strain=JCM 16328

organism_name: Natronoarchaeum mannanilyticum


infraspecific_name: strain=JCM 9785

organism_name: Rhodothermus marinus


asm_submitter: Research Center for Infectious Disease, Okinawa Prefectural Institute of Health and Environment


infraspecific_name: strain=MAFF 311772

organism_name: Ralstonia pseudosolanacearum


infraspecific_name: strain=MAFF 311893


infraspecific_name: strain=JCM 13028

organism_name: Desulfonauticus autotrophicus


organism_name: Shigella flexneri


infraspecific_name: strain=JCM 18270

organism_name: Thermoanaerobacterium calidifontis


annotation_name: Annotation submitted by Department of Biological Sciences, Tokyo Metropolitan University

organism_name: Thermodesulfovibrio sp. TK500a


annotation_provider: Graduate School of Human Life and Ecology, Osaka Metropolitan University


annotation_name: Annotation submitted by Graduate School of Engineering Department of Material and Environmental Chemistry, Utsunomiya University

organism_name: Neobacillus sp. B24


annotation_name: Annotation submitted by Kanagawa Prefectural Institute of Public Health

organism_name: Legionella pneumophila


annotation_name: Annotation submitted by Institute for Agro-Environmental Sciences, National Agriculture and Food Research Organization

organism_name: Agrobacterium sp. 5Ca50


annotation_name: Annotation submitted by Laboratory of Food Microbiology and Food Safety, School of Veterinary Medicine, Rakuno Gakuen University

organism_name: Lactococcus petauri


annotation_name: Annotation submitted by Research Institute for Bioscience Products & Fine Chemicals, Ajinomoto Co., Inc.

infraspecific_name: strain=TUA 1490L

organism_name: Lactiplantibacillus plantarum


annotation_provider: RIKEN-BRC

infraspecific_name: strain=JCM 30234

organism_name: Lentibacillus kimchii


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)


infraspecific_name: strain=JCM 16159

organism_name: Vulcanisaeta sp. JCM 16159


infraspecific_name: strain=JCM 9157

organism_name: Halalkalibacter akibai


organism_name: Escherichia coli


infraspecific_name: strain=MAFF 311771


infraspecific_name: strain=MAFF 311892


infraspecific_name: strain=JCM 16085

organism_name: Desulfoconvexum algidum


infraspecific_name: strain=JCM 8421

organism_name: Pyrococcus woesei


asm_submitter: Graduate School of Human Life and Ecology, Osaka Metropolitan University

organism_name: Mycobacterium shinjukuense


annotation_provider: Graduate School of Engineering Department of Material and Environmental Chemistry, Utsunomiya University

organism_name: Ochrobactrum quorumnocens


annotation_name: Annotation submitted by Department of microbiology, Tokyo Metropolitan Institute of Public Health

organism_name: Streptococcus pneumoniae


organism_name: Bradyrhizobium diazoefficiens


annotation_provider: Institute for Agro-Environmental Sciences, National Agriculture and Food Research Organization

organism_name: Agrobacterium sp. 5Ca39


annotation_name: Annotation submitted by Gifu University

annotation_provider: Gifu University

asm_submitter: Gifu University

organism_name: Pseudomonas protegens


annotation_name: Annotation submitted by National Institute of Infectious Disease

organism_name: Stenotrophomonas maltophilia


infraspecific_name: strain=JCM 30151

organism_name: Halomonas garicola


infraspecific_name: strain=JCM 16084

organism_name: Halomonas beimenensis


infraspecific_name: strain=JCM 9140

organism_name: Halalkalibacter wakoensis


annotation_name: Annotation submitted by Research Center for Infectious Disease, Okinawa Prefectural Institute of Health and Environment

excluded_from_refseq: genome length too large


annotation_name: Annotation submitted by National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 211269

organism_name: Ralstonia pseudosolanacearum


asm_submitter: Centers for Disease Control and Prevention

organism_name: Streptococcus pyogenes


infraspecific_name: strain=MAFF 311891


infraspecific_name: strain=JCM 10627

organism_name: Methanocalculus pumilus


infraspecific_name: strain=JCM 11597

organism_name: Thermodiscus maritimus


annotation_name: Annotation submitted by Department of Medical Technology, Faculty of Health Science, Kumamoto Health Science University

organism_name: Escherichia coli


annotation_name: Annotation submitted by Department of Microbiology, Juntendo University School of Medicine

organism_name: Elizabethkingia anophelis


organism_name: Legionella pneumophila


asm_submitter: FDA


asm_submitter: Institute for Agro-Environmental Sciences, National Agriculture and Food Research Organization

organism_name: Agrobacterium sp. 6Ca8


asm_submitter: Antimicrobial Resistance Research Center, National Institute of Infectious Diseases

organism_name: Klebsiella pneumoniae


annotation_name: Annotation submitted by University of Tsukuba

annotation_provider: University of Tsukuba

asm_submitter: University of Tsukuba

organism_name: Candidatus Uabimicrobiia bacterium SRT722


asm_submitter: McGill University

organism_name: Streptomyces saintjeani


organism_name: Streptomyces borealis


annotation_provider: National Institute of Infectious Disease


annotation_name: Annotation submitted by RIKEN-BRC

infraspecific_name: strain=JCM 30029

organism_name: Halobium salinum


infraspecific_name: strain=JCM 15963

organism_name: Rhabdothermus arcticus


organism_name: Salmonella enterica


asm_submitter: CDC


infraspecific_name: strain=JCM 8702

organism_name: Staphylococcus aureus


asm_submitter: National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 106269


infraspecific_name: strain=MAFF 311890


infraspecific_name: strain=JCM 12397

organism_name: Hydrogenovibrio thermophilus


infraspecific_name: strain=JCM 15996

organism_name: Symbiobacterium turbinis


annotation_name: Annotation submitted by Japan Agency for Marine-Earth Science and Technology

organism_name: Allocellulophaga tsushimaensis


annotation_name: Annotation submitted by Graduate School of Human Life and Ecology, Osaka Metropolitan University

organism_name: Mycobacterium shinjukuense


annotation_name: Annotation submitted by Department of Bioscience, College of Bioresource Sciences, Nihon University

organism_name: Acidocella aluminiidurans


annotation_name: Annotation submitted by Laboratory of Soil Science, Appl Biol Chem, Grad Sch Agr Life Sci, The Universit

organism_name: Kitasatospora sp. Xyl93


organism_name: Escherichia coli


annotation_name: Annotation submitted by Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)

organism_name: Bradyrhizobium diazoefficiens


annotation_name: Annotation submitted by Japan Atomic Energy Agency

annotation_provider: Japan Atomic Energy Agency

asm_submitter: Japan Atomic Energy Agency

organism_name: Micrococcus luteus


annotation_name: Annotation submitted by Department of Bacteriology, National Institute of Infectious Diseases

organism_name: Escherichia albertii


organism_name: Klebsiella pneumoniae


organism_name: Candidatus Uabimicrobiia bacterium SRT719


asm_submitter: National Institute of Infectious Disease

organism_name: Stenotrophomonas maltophilia


infraspecific_name: strain=JCM 25414

organism_name: Asaia platycodi


infraspecific_name: strain=JCM 15927

organism_name: Mycolicibacterium pyrenivorans


infraspecific_name: strain=JCM 7540

organism_name: Paenibacillus thiaminolyticus


annotation_provider: Research Center for Infectious Disease, Okinawa Prefectural Institute of Health and Environment


infraspecific_name: strain=MAFF 106268

organism_name: Ralstonia pseudosolanacearum


infraspecific_name: strain=MAFF 311889


infraspecific_name: strain=JCM 16107

organism_name: Thiomonas islandica


infraspecific_name: strain=JCM 1385

organism_name: Clostridium baratii


annotation_name: Annotation submitted by Division of Sustainable Energy and Environmental Engineering, Osaka University

organism_name: Citrobacter koseri


annotation_name: Annotation submitted by Innovative Research Institute, Morinaga Milk Industry Co Ltd

organism_name: Bifidobacterium longum subsp. longum


annotation_name: Annotation submitted by National Institute of Advanced Industrial Science and Technology (AIST)

organism_name: Piscibacter tructae


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

asm_submitter: National Center for Biotechnology Information


asm_submitter: Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)


annotation_name: Annotation submitted by Graduate School of Frontier Sciences, The University of Tokyo

infraspecific_name: strain=Th 4A

organism_name: Azorhizobium caulinodans


organism_name: Candidatus Uabimicrobiia bacterium SRT713


annotation_name: Annotation submitted by National Institute of Infectious Disease


infraspecific_name: strain=JCM 25354

organism_name: Asaia prunellae


infraspecific_name: strain=JCM 15917

organism_name: Mediterraneibacter faecis


infraspecific_name: strain=JCM 6294

organism_name: Bacteroides pyogenes


annotation_name: Annotation submitted by National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 106267


infraspecific_name: strain=MAFF 106255


infraspecific_name: strain=JCM 13218

organism_name: Sporomusa intestinalis


infraspecific_name: strain=JCM 13990

organism_name: Tindallia texcoconensis


annotation_name: Annotation submitted by Laboratory of Genome Science  Graduate School of Marine Science and Technology, Tokyo University of Marine Science and Technology

organism_name: Edwardsiella piscicida


annotation_name: Annotation submitted by Department of Laboratory Medicine, School of Medicine, Keio University

organism_name: Enterococcus songbeiensis


annotation_name: Annotation submitted by Department of Microbiology, Tokyo Metropolitan Institute of Public Health

organism_name: Escherichia coli


annotation_name: Annotation submitted by University of Wisconsin-Madison

annotation_provider: University of Wisconsin-Madison

asm_submitter: University of Wisconsin - Madison

infraspecific_name: strain=LSBJ


organism_name: Salmonella enterica


organism_name: Micrococcus luteus


annotation_name: Annotation submitted by Kitasato University

annotation_provider: Kitasato University

asm_submitter: Kitasato University

organism_name: Streptococcus dysgalactiae subsp. equisimilis L1


annotation_name: Annotation submitted by Nagoya University

annotation_provider: Nagoya University

asm_submitter: Nagoya University

organism_name: Dehalogenimonas sp. NIT-SK1


annotation_name: Annotation submitted by RIKEN-BRC

asm_submitter: RIKEN-BRC

infraspecific_name: strain=JCM 25330

organism_name: Acetobacter persici JCM 25330


infraspecific_name: strain=JCM 15907

organism_name: Porphyromonas gingivicanis


infraspecific_name: strain=JCM 6292


annotation_name: Annotation submitted by Research Center for Infectious Disease, Okinawa Prefectural Institute of Health and Environment


annotation_provider: National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 106266

organism_name: Ralstonia pseudosolanacearum


infraspecific_name: strain=JCM 15747

organism_name: Thiofractor thiocamini


infraspecific_name: strain=JCM 9190

organism_name: Pyrobaculum organotrophum


annotation_provider: Laboratory of Genome Science  Graduate School of Marine Science and Technology, Tokyo University of Marine Science and Technology


annotation_provider: Department of Laboratory Medicine, School of Medicine, Keio University


annotation_provider: NCBI


annotation_name: Annotation submitted by Kochi Gakuen University

annotation_provider: Kochi Gakuen University

asm_submitter: Kochi Gakuen University

organism_name: Helicobacter pylori


annotation_name: Annotation submitted by Forest Pest Management Lab, Forestry and Forest Products Research Institute

organism_name: Pseudomonas sp. FFPRI_1


annotation_name: Annotation submitted by Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)

organism_name: Bradyrhizobium diazoefficiens


organism_name: Shigella flexneri


annotation_name: Annotation submitted by Animal Hygiene, Kitasato University School of Veterinary Medicine

organism_name: Prescottella equi


annotation_name: Annotation submitted by National Institute of Advanced Industrial Science and Technology

organism_name: Mesoterricola sp. JemC181


annotation_name: Annotation submitted by Osaka Institute of Public Health

annotation_provider: Osaka Institute of Public Health

asm_submitter: Osaka Institute of Public Health

organism_name: Bordetella pertussis


annotation_provider: RIKEN-BRC

infraspecific_name: strain=JCM 25146

organism_name: Acetobacter okinawensis JCM 25146


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

organism_name: Escherichia coli


infraspecific_name: strain=JCM 15760

organism_name: Haloarcula argentinensis


infraspecific_name: strain=JCM 6156

organism_name: Pseudomonas putida


asm_submitter: Research Center for Infectious Disease, Okinawa Prefectural Institute of Health and Environment


infraspecific_name: strain=MAFF 106265


infraspecific_name: strain=MAFF 311887


infraspecific_name: strain=JCM 12127

organism_name: Desulfurobacterium pacificum


infraspecific_name: strain=JCM 10985

organism_name: Thermococcus waiotapuensis


asm_submitter: Laboratory of Genome Science  Graduate School of Marine Science and Technology, Tokyo University of Marine Science and Technology

organism_name: Edwardsiella piscicida


annotation_name: Annotation submitted by Department of Mycobacteriology, National Institute of Infectious Diseases

organism_name: Mycobacterium toneyamaense


annotation_name: Annotation submitted by Tokyo University of Pharmacy and Life Sciences

organism_name: Sulfurospirillaceae bacterium ADMFC2


annotation_provider: Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)


annotation_name: Annotation submitted by Super-cutting-edge Grand and Advanced Research (SUGAR) Program, Institute for Extra-cutting-edge Science and Technology Avant-garde Research (X-star), Japan Agency for Marine-Earth Science and Technology

organism_name: Methanocalculus sp. MC2


annotation_name: Annotation submitted by Hiroshima University

annotation_provider: Hiroshima University

asm_submitter: Hiroshima University


annotation_provider: National Institute of Advanced Industrial Science and Technology

organism_name: Mesoterricola sp. MK458


annotation_name: Annotation submitted by Marine Resource Science, Kochi University

organism_name: Flavobacterium sp. KY-23415


infraspecific_name: strain=JCM 23214

organism_name: Sneathiella glossodoripedis


infraspecific_name: strain=JCM 15637

organism_name: Prevotella histicola


infraspecific_name: strain=JCM 2850

organism_name: Methylobacillus glycogenes


annotation_name: Annotation submitted by National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 106264

organism_name: Ralstonia pseudosolanacearum


infraspecific_name: strain=MAFF 311886


infraspecific_name: strain=JCM 19824

organism_name: Sulfurovum aggregans


infraspecific_name: strain=JCM 17300

organism_name: Ligilactobacillus faecis


annotation_name: Annotation submitted by Graduate School of Engineering Department of Material and Environmental Chemistry, Utsunomiya University

organism_name: Neobacillus sp. S1227


annotation_provider: Tokyo University of Pharmacy and Life Sciences

organism_name: Eubacteriales bacterium ADMFC1


organism_name: Escherichia coli


annotation_provider: Super-cutting-edge Grand and Advanced Research (SUGAR) Program, Institute for Extra-cutting-edge Science and Technology Avant-garde Research (X-star), Japan Agency for Marine-Earth Science and Technology


annotation_name: Annotation submitted by Laboratory of Plant Pathology, Division of Applied Biosciences, Graduate School of Agriculture, Kyoto university

organism_name: Pseudomonas syringae


annotation_provider: Marine Resource Science, Kochi University

organism_name: Flavobacterium sp. KY-23412


organism_name: Bordetella pertussis


annotation_name: Annotation submitted by RIKEN-BRC

infraspecific_name: strain=JCM 21793

organism_name: Nitratireductor aquibiodomus


infraspecific_name: strain=JCM 15548

organism_name: Geofilum rubicundum JCM 15548


infraspecific_name: strain=JCM 2434

organism_name: Aggregatibacter actinomycetemcomitans


annotation_name: Annotation submitted by Research Center for Infectious Disease, Okinawa Prefectural Institute of Health and Environment


infraspecific_name: strain=MAFF 211267


infraspecific_name: strain=MAFF 311885


infraspecific_name: strain=JCM 13302

organism_name: Hydrogenivirga okinawensis


infraspecific_name: strain=JCM 14714

organism_name: Desulfomicrobium aestuarii


annotation_name: Annotation submitted by Laboratory of Genome Science  Graduate School of Marine Science and Technology, Tokyo University of Marine Science and Technology

organism_name: Edwardsiella piscicida


annotation_provider: Graduate School of Engineering Department of Material and Environmental Chemistry, Utsunomiya University

organism_name: Neobacillus sp. S1115


annotation_name: Annotation submitted by National Institute for Environmental Studies, Japan

organism_name: Pseudomonas aeruginosa


annotation_name: Annotation submitted by Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)

organism_name: Bradyrhizobium diazoefficiens


annotation_name: Annotation submitted by Kyushu University

annotation_provider: Kyushu University

asm_submitter: Kyushu University

infraspecific_name: strain=GBlys

organism_name: Geobacillus kaustophilus


annotation_name: Annotation submitted by Division of Anaerobe Research, Life Science Research Center, Gifu University

organism_name: Elizabethkingia sp. GTC18459


asm_submitter: Marine Resource Science, Kochi University

organism_name: Flavobacterium psychrophilum


asm_submitter: FDA


annotation_name: Annotation submitted by Osaka Institute of Public Health


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)


infraspecific_name: strain=JCM 21714

organism_name: Gracilibacillus boraciitolerans


infraspecific_name: strain=JCM 15471

organism_name: Brachybacterium zhongshanense


infraspecific_name: strain=JCM 2151

organism_name: Staphylococcus aureus


annotation_provider: Research Center for Infectious Disease, Okinawa Prefectural Institute of Health and Environment

organism_name: Escherichia coli


asm_submitter: National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 106263

organism_name: Ralstonia pseudosolanacearum


infraspecific_name: strain=MAFF 311884


infraspecific_name: strain=JCM 11956

organism_name: Vulcanithermus mediatlanticus


infraspecific_name: strain=JCM 15540

organism_name: Methanosarcina subterranea


annotation_provider: Division of Anaerobe Research, Life Science Research Center, Gifu University

organism_name: Desulfovibrio sp. GTC20076


annotation_name: Annotation submitted by Institute for Agro-Environmental Sciences, NARO; Division of Climate Change Miti

organism_name: Nitrosospira sp. TNL300


annotation_name: Annotation submitted by University of Tsukuba

annotation_provider: University of Tsukuba

asm_submitter: University of Tsukuba

organism_name: Cupriavidus sp. LA-1


annotation_name: Annotation submitted by The National Agriculture and Food Research Organization

organism_name: Burkholderia gladioli


annotation_name: Annotation submitted by Microbiology  Allied Health Sciences, Kitasato university

organism_name: Enterobacter asburiae


annotation_name: Annotation submitted by Graduate Institute of Veterinary Pathobiology, National Chung Hsing University

organism_name: Streptococcus sp. STR1/CE/0325


annotation_name: Annotation submitted by Marine Resource Science, Kochi University


organism_name: Bordetella pertussis


infraspecific_name: strain=JCM 21531

organism_name: Acetivibrio straminisolvens


infraspecific_name: strain=JCM 15430

organism_name: Mycobacterium avium


annotation_name: Annotation submitted by National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 211268


annotation_provider: National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 311883


infraspecific_name: strain=JCM 11886

organism_name: Methanocaldococcus indicus


infraspecific_name: strain=JCM 19991

organism_name: Thermogutta hypogea


annotation_name: Annotation submitted by Mie Univerisy

annotation_provider: Mie Univerisy

asm_submitter: Mie Univerisy

organism_name: Cellulosilyticum lentocellum


annotation_provider: Institute for Agro-Environmental Sciences, NARO; Division of Climate Change Miti

organism_name: Nitrosospira sp. TNL200


annotation_provider: NCBI

asm_submitter: National Center for Biotechnology Information

organism_name: Escherichia coli


organism_name: Lactococcus garvieae


asm_submitter: Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)

organism_name: Bradyrhizobium diazoefficiens


annotation_name: Annotation submitted by Institute for Agro-Environmental Sciences, National Agriculture and Food Research Organization

organism_name: Afipia dichlorophenoxyacetatis


annotation_provider: Microbiology  Allied Health Sciences, Kitasato university

organism_name: Pseudomonas aeruginosa


annotation_name: Annotation submitted by RIKEN-BRC

annotation_provider: RIKEN-BRC

infraspecific_name: strain=JCM 2013

organism_name: Campylobacter jejuni subsp. jejuni


annotation_name: Annotation submitted by Research Center for Infectious Disease, Okinawa Prefectural Institute of Health and Environment


annotation_name: Annotation submitted by Faculty of Life and Environmental Sciences, University of Yamanashi

organism_name: Opitutaceae bacterium MRC-7


asm_submitter: Institute for Agro-Environmental Sciences, NARO; Division of Climate Change Miti

organism_name: Nitrosospira sp. TNL100


organism_name: Lactococcus petauri


annotation_name: Annotation submitted by Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)


annotation_name: Annotation submitted by Center for Industrialization of Agricultural and Livestock Microorganisms

organism_name: Paenibacillus polymyxa


organism_name: Flavobacterium psychrophilum


annotation_provider: Osaka Institute of Public Health

organism_name: Bordetella pertussis


infraspecific_name: strain=JCM 21475

organism_name: Azotobacter vinelandii


infraspecific_name: strain=JCM 15395

organism_name: Virgibacillus siamensis


infraspecific_name: strain=JCM 1272

organism_name: Bifidobacterium longum subsp. infantis


infraspecific_name: strain=MAFF 106261

organism_name: Ralstonia pseudosolanacearum


infraspecific_name: strain=MAFF 311882


infraspecific_name: strain=JCM 14636

organism_name: Piezobacter thermophilus


infraspecific_name: strain=JCM 10128

organism_name: Thermococcus fumicolans


organism_name: Escherichia coli


annotation_provider: Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)

organism_name: Bradyrhizobium diazoefficiens


annotation_name: Annotation submitted by Kyoto Pharmaceutical University

annotation_provider: Kyoto Pharmaceutical University

asm_submitter: Kyoto Pharmaceutical University

infraspecific_name: strain=ATCC BAA-1605

organism_name: Acinetobacter baumannii


annotation_name: Annotation submitted by Research Institute for Sustainable Humanosphere (RISH), Kyoto University

organism_name: Arthrobacter sp. GmRoot4-19


annotation_name: Annotation submitted by Gifu University Center for Conservation of Microbial Genetic Resource, GCMR

organism_name: Lichenicola sp. GTC18331


infraspecific_name: strain=JCM 21221

organism_name: Halomonas halophila


infraspecific_name: strain=JCM 15092

organism_name: Phocaeicola paurosaccharolyticus JCM 15092


infraspecific_name: strain=JCM 1254

organism_name: Bifidobacterium bifidum JCM 1254


infraspecific_name: strain=MAFF 106260


infraspecific_name: strain=MAFF 311881


infraspecific_name: strain=JCM 14586

organism_name: Thioprofundum lithotrophicum


infraspecific_name: strain=JCM 13303

organism_name: Marinitoga okinawensis


annotation_name: Annotation submitted by NITE Biological Resource Center, National Institute of Technology and Evaluation

organism_name: Caldifarcimen microaerophilum


annotation_name: Annotation submitted by Institute for Agro-Environmental Sciences, NARO; Division of Climate Change Miti

organism_name: Nitrosomonas sp. TNE100


organism_name: Lactococcus petauri


annotation_name: Annotation submitted by Microbiology and Immunology, Nihon University School of Dentistry at Matsudo

organism_name: Leptotrichia sp. SK-5


annotation_provider: Research Institute for Sustainable Humanosphere (RISH), Kyoto University

organism_name: Arthrobacter sp. GmRoot4-5


asm_submitter: Research Institute for Sustainable Humanosphere (RISH), Kyoto University

organism_name: Arthrobacter sp. NtRootF04


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)


annotation_provider: Gifu University Center for Conservation of Microbial Genetic Resource, GCMR

organism_name: Lichenicola sp. GTC18330


annotation_provider: Marine Resource Science, Kochi University

organism_name: Lactococcus garvieae


annotation_name: Annotation submitted by Osaka Institute of Public Health

organism_name: Bordetella pertussis


asm_submitter: RIKEN-BRC

infraspecific_name: strain=JCM 21176

organism_name: Gluconobacter cerinus


infraspecific_name: strain=JCM 15074

organism_name: Shewanella marina


infraspecific_name: strain=JCM 15514

organism_name: Salinisphaera hydrothermalis


organism_name: Escherichia coli


infraspecific_name: strain=MAFF 106259

organism_name: Ralstonia pseudosolanacearum


infraspecific_name: strain=MAFF 311880


infraspecific_name: strain=JCM 18470

organism_name: Methanobacterium movilense


infraspecific_name: strain=JCM 16120

organism_name: Caldilinea tarbellica


annotation_name: Annotation submitted by Department of Microbiology, Juntendo University School of Medicine

organism_name: Achromobacter xylosoxidans


annotation_name: Annotation submitted by Genome Information Research Center, Research Institute for Microbial Diseases, Osaka University

excluded_from_refseq: annotation fails completeness check

infraspecific_name: strain=GTC 3P0021

organism_name: Burkholderia pseudomallei


annotation_name: Annotation submitted by Nagoya University school of Medicine

annotation_provider: Nagoya University school of Medicine

asm_submitter: Nagoya University school of Medicine

organism_name: Mediterraneibacter flintii


organism_name: Bradyrhizobium diazoefficiens


annotation_name: Annotation submitted by KAGOME CO.,LTD.

annotation_provider: KAGOME CO.,LTD.

asm_submitter: KAGOME CO.,LTD.

organism_name: Enterococcus casseliflavus


annotation_name: Annotation submitted by Marine Resource Science, Kochi University

organism_name: Lactococcus formosensis


annotation_name: Annotation submitted by Fujita Health University

annotation_provider: Fujita Health University

asm_submitter: Fujita Health University

organism_name: Mycobacterium avium subsp. hominissuis


annotation_name: Annotation submitted by RIKEN-BRC

infraspecific_name: strain=JCM 21060

organism_name: Rhodospirillum centenum


infraspecific_name: strain=JCM 15069

organism_name: Lutaonella thermophila


asm_submitter: Gifu University Center for Conservation of Microbial Genetic Resource, GCMR

organism_name: Varibaculum sp. GTC20041


annotation_name: Annotation submitted by Research Center for Infectious Disease, Okinawa Prefectural Institute of Health and Environment


annotation_name: Annotation submitted by National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 107632


infraspecific_name: strain=MAFF 311879


infraspecific_name: strain=JCM 16812

organism_name: Desulfovibrio simplex


infraspecific_name: strain=JCM 16410

organism_name: Desulfosoma profundi


annotation_name: Annotation submitted by Division of Anaerobe Research, Life Science Research Center, Gifu University

organism_name: Prevotella bivia


organism_name: Escherichia coli


annotation_provider: Genome Information Research Center, Research Institute for Microbial Diseases, Osaka University

infraspecific_name: strain=GTC 3P0077

organism_name: Burkholderia mallei


annotation_name: Annotation submitted by Department of Surgery, Kochi Medical School, Kochi University

organism_name: Helicobacter pylori


annotation_name: Annotation submitted by National Institute of Animal Health, National Agriculture and Food Research Organization


annotation_name: Annotation submitted by Research Institute for Sustainable Humanosphere (RISH), Kyoto University

organism_name: Arthrobacter sp. TmtSoilC51


infraspecific_name: strain=MAFF 311855

organism_name: Ralstonia pseudosolanacearum


infraspecific_name: strain=MAFF 311878


infraspecific_name: strain=JCM 15390

organism_name: Nautilia abyssi


infraspecific_name: strain=JCM 15785

organism_name: Oleidesulfovibrio vietnamensis


annotation_name: Annotation submitted by Department of Biotechnology and Life Sciences, Sojo University

organism_name: Serratia rubidaea


asm_submitter: Genome Information Research Center, Research Institute for Microbial Diseases, Osaka University

infraspecific_name: strain=GTC 3P1517

organism_name: Brucella melitensis


annotation_provider: Department of Surgery, Kochi Medical School, Kochi University


annotation_name: Annotation submitted by Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)

organism_name: Bradyrhizobium diazoefficiens


annotation_name: Annotation submitted by Nissin York Co.,Ltd.

annotation_provider: Nissin York Co.,Ltd.

asm_submitter: Nissin York Co.,Ltd.

organism_name: Lacticaseibacillus paracasei


asm_submitter: Marine Resource Science, Kochi University

organism_name: Lactococcus formosensis


organism_name: Mycobacterium avium subsp. hominissuis


infraspecific_name: strain=JCM 20774

organism_name: Marinomonas vaga


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)


infraspecific_name: strain=JCM 14805

organism_name: Prosthecobacter fluviatilis


annotation_name: Annotation submitted by Microbiology and Infectious Diseases, Nara Medical University

organism_name: Klebsiella variicola


annotation_provider: Research Center for Infectious Disease, Okinawa Prefectural Institute of Health and Environment


organism_name: Arthrobacter sp. DualSoilC46


infraspecific_name: strain=JCM 20666

organism_name: Alcaligenes faecalis


infraspecific_name: strain=JCM 14803

organism_name: Bisbaumannia salifodinae


annotation_name: Annotation submitted by Kyoto Tachibana University

annotation_provider: Kyoto Tachibana University

asm_submitter: Kyoto Tachibana University

organism_name: Aeromonas hydrophila


asm_submitter: Research Center for Infectious Disease, Okinawa Prefectural Institute of Health and Environment

organism_name: Escherichia coli


annotation_provider: National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 311907

organism_name: Ralstonia pseudosolanacearum


asm_submitter: National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 311877


infraspecific_name: strain=JCM 30146

organism_name: Desulfovibrio biadhensis


infraspecific_name: strain=JCM 31403

organism_name: Megasphaera hexanoica


annotation_provider: Department of Biotechnology and Life Sciences, Sojo University

organism_name: Serratia rubidaea


annotation_name: Annotation submitted by Genome Information Research Center, Research Institute for Microbial Diseases, Osaka University

infraspecific_name: strain=GTC 3P1515

organism_name: Brucella melitensis biovar Melitensis


annotation_name: Annotation submitted by Nissin York Co., Ltd.

annotation_provider: Nissin York Co., Ltd.

asm_submitter: Nissin York Co., Ltd.

organism_name: Lactococcus lactis subsp. lactis


organism_name: Bradyrhizobium diazoefficiens


annotation_provider: NCBI

asm_submitter: National Center for Biotechnology Information


annotation_name: Annotation submitted by Laboratory for Microbiome Sciences, Center for Integrative Medical Sciences, RIKEN

organism_name: Caldifermentibacillus hisashii


organism_name: Arthrobacter sp. DualSoilC32


annotation_name: Annotation submitted by College of Horticulture, Hunan Agricultural University

organism_name: Paenibacillus polymyxa


annotation_name: Annotation submitted by Marine Resource Science, Kochi University

organism_name: Lactococcus formosensis


annotation_name: Annotation submitted by Department of Bacteriology I, National Institute of Infectious Diseases

organism_name: Escherichia coli O166:H15


annotation_name: Annotation submitted by RIKEN-BRC

annotation_provider: RIKEN-BRC

infraspecific_name: strain=JCM 20266

organism_name: Bacillus cereus


infraspecific_name: strain=JCM 14758

organism_name: Shewanella algae


annotation_name: Annotation submitted by Department of Microbiology and Infectious Diseases, Nara Medical University


annotation_name: Annotation submitted by Research Center for Infectious Disease, Okinawa Prefectural Institute of Health and Environment


annotation_name: Annotation submitted by National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 311906


infraspecific_name: strain=MAFF 311876


infraspecific_name: strain=JCM 14728

organism_name: Exilispira thermophila


infraspecific_name: strain=JCM 11825

organism_name: Thermococcus marinus


annotation_name: Annotation submitted by Kyushu University

annotation_provider: Kyushu University

asm_submitter: Kyushu University

organism_name: Escherichia coli O103:H2


infraspecific_name: strain=GTC 3P1521

organism_name: Brucella melitensis


annotation_name: Annotation submitted by National Institute of Infectious Diseases

organism_name: Legionella sp. JM-2024


organism_name: Escherichia coli


annotation_name: Annotation submitted by Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)


annotation_provider: Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)


annotation_name: Annotation submitted by Hakodate Junior College

annotation_provider: Hakodate Junior College

asm_submitter: Hakodate Junior College


annotation_name: Annotation submitted by Research Institute for Sustainable Humanosphere (RISH), Kyoto University

organism_name: Arthrobacter sp. DualSoilB13


annotation_name: Annotation submitted by Division of Anaerobe Research, Life Science Research Center, Gifu University

organism_name: Sporosarcina sp. GTC18466


annotation_provider: Department of Bacteriology I, National Institute of Infectious Diseases


infraspecific_name: strain=JCM 20135


infraspecific_name: strain=JCM 14267

organism_name: Alkalimonas collagenimarina


annotation_provider: Department of Microbiology and Infectious Diseases, Nara Medical University

organism_name: Klebsiella pneumoniae


infraspecific_name: strain=MAFF 331046

organism_name: Ralstonia pseudosolanacearum


infraspecific_name: strain=MAFF 106254


infraspecific_name: strain=JCM 13516

organism_name: Caldococcus noboribetus


infraspecific_name: strain=JCM 12927

organism_name: Desulfuromonas svalbardensis


infraspecific_name: strain=GTC 3P1502


annotation_provider: National Institute of Infectious Diseases


asm_submitter: Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)

organism_name: Bradyrhizobium diazoefficiens


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)


annotation_name: Annotation submitted by Laboratory of Bacterial Genomics, Pathogen Genomics Center, National Institute of Infectious Diseases

organism_name: Providencia vermicola


annotation_name: Annotation submitted by Gifu University Center for Conservation of Microbial Genetic Resource, GCMR

organism_name: Cellulomonas sp. GTC20042


asm_submitter: Department of Bacteriology I, National Institute of Infectious Diseases

organism_name: Escherichia coli O166:H15


asm_submitter: RIKEN-BRC

infraspecific_name: strain=KCTC 1686

organism_name: Klebsiella michiganensis KCTC 1686


infraspecific_name: strain=JCM 14265

organism_name: Halorubrum ejinorense


asm_submitter: Department of Microbiology and Infectious Diseases, Nara Medical University


infraspecific_name: strain=MAFF 331042


infraspecific_name: strain=MAFF 311875


excluded_from_refseq: contaminated; not used as type

infraspecific_name: strain=JCM 13384

organism_name: Palaeococcus helgesonii


infraspecific_name: strain=JCM 12926

organism_name: Desulfuromusa ferrireducens


organism_name: Escherichia coli O103:H2


annotation_name: Annotation submitted by Genome Information Research Center, Research Institute for Microbial Diseases, Osaka University

infraspecific_name: strain=RIMD 2214379

organism_name: Vibrio cholerae


annotation_name: Annotation submitted by Graduate School of Integrated Sciences for Life, Hiroshima University

organism_name: Escherichia coli


annotation_name: Annotation submitted by Nagoya Institute of Technology

annotation_provider: Nagoya Institute of Technology

asm_submitter: Nagoya Institute of Technology

infraspecific_name: strain=NIT-OBY

organism_name: Dehalococcoides mccartyi


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


annotation_name: Annotation submitted by Joint Faculty of Veterinary Medicine, Yamaguchi University

organism_name: Borrelia miyamotoi


annotation_name: Annotation submitted by Hokkaido Institute of Public Health

annotation_provider: Hokkaido Institute of Public Health

asm_submitter: Hokkaido Institute of Public Health

organism_name: Escherichia albertii


annotation_name: Annotation submitted by RIKEN-BRC

infraspecific_name: strain=JCM 19908

organism_name: Halobacterium rubrum


infraspecific_name: strain=JCM 14115

organism_name: Paenarthrobacter nitroguajacolicus


annotation_name: Annotation submitted by Department of Microbiology and Infectious Diseases, Nara Medical University


annotation_name: Annotation submitted by Research Center for Infectious Disease, Okinawa Prefectural Institute of Health and Environment


annotation_name: Annotation submitted by National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 331041

organism_name: Ralstonia pseudosolanacearum


infraspecific_name: strain=MAFF 311874


infraspecific_name: strain=JCM 10560

organism_name: Hydrogenobacter subterraneus


infraspecific_name: strain=JCM 18154

organism_name: Mesotoga infera


annotation_provider: Genome Information Research Center, Research Institute for Microbial Diseases, Osaka University

infraspecific_name: strain=RIMD 0366051

organism_name: Campylobacter jejuni


annotation_name: Annotation submitted by Microbial ecology laboratory, Department of Biological Sciences, Chuo University

organism_name: Nitrobacter sp. CN101


annotation_name: Annotation submitted by Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)

organism_name: Bradyrhizobium diazoefficiens


annotation_name: Annotation submitted by National Institute of Animal Health, National Agriculture and Food Research Organization

organism_name: Clostridium perfringens


annotation_name: Annotation submitted by Graduate School of Engineering, Department of Material and Environmental Chemistry, Utsunomiya University

organism_name: Pseudomonas sp. Tof1


annotation_name: Annotation submitted by Antimicrobial Resistance Research Center, National Institute of Infectious Diseases

organism_name: Staphylococcus aureus


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)


infraspecific_name: strain=JCM 19705

organism_name: Fodinicurvata halophila


infraspecific_name: strain=JCM 13449

organism_name: Prevotella denticola


infraspecific_name: strain=MAFF 211282


infraspecific_name: strain=MAFF 311873


infraspecific_name: strain=JCM 17152

organism_name: Oligosphaera ethanolica


infraspecific_name: strain=JCM 19320

organism_name: Aminobacterium thunnarium


annotation_name: Annotation submitted by Laboratory of Soil Biology and Chemistry, Graduate School of Bioagricultural Sciences, Nagoya University

organism_name: Methylosinus sporium


asm_submitter: Genome Information Research Center, Research Institute for Microbial Diseases, Osaka University

infraspecific_name: strain=RIMD 4001901

organism_name: Kluyvera georgiana


annotation_name: Annotation submitted by Bacteriology  Graduate School of Medicine, Gunma University

organism_name: Prevotella bivia


annotation_name: Annotation submitted by Hokkaido University

annotation_provider: Hokkaido University

asm_submitter: Hokkaido University

organism_name: Kitasatospora purpeofusca


annotation_provider: Graduate School of Engineering, Department of Material and Environmental Chemistry, Utsunomiya University

organism_name: Pseudomonas sp. Van50


annotation_provider: Antimicrobial Resistance Research Center, National Institute of Infectious Diseases


infraspecific_name: strain=JCM 19597

organism_name: Salinarchaeum chitinilyticum


infraspecific_name: strain=JCM 13213

organism_name: Thermodesulfovibrio aggregans


organism_name: Klebsiella pneumoniae


annotation_provider: Research Center for Infectious Disease, Okinawa Prefectural Institute of Health and Environment

organism_name: Escherichia coli


annotation_provider: National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 211266

organism_name: Ralstonia pseudosolanacearum


infraspecific_name: strain=MAFF 311872


infraspecific_name: strain=JCM 17151

organism_name: Lactivibrio alcoholicus


organism_name: Enterobacter hormaechei subsp. hoffmannii


organism_name: Enterobacter hormaechei


infraspecific_name: strain=JCM 18546

organism_name: Desulfocurvus thunnarius


annotation_provider: Laboratory of Soil Biology and Chemistry, Graduate School of Bioagricultural Sciences, Nagoya University


annotation_name: Annotation submitted by Genome Information Research Center, Research Institute for Microbial Diseases, Osaka University

infraspecific_name: strain=RIMD 3168009

organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


annotation_name: Annotation submitted by Fukui Prefectural University

annotation_provider: Fukui Prefectural University

asm_submitter: Fukui Prefectural University

organism_name: Vibrio sabulosilitoris


annotation_provider: NCBI


organism_name: Bradyrhizobium diazoefficiens


annotation_name: Annotation submitted by Department of Life Science & Biotechnology, Kansai University

organism_name: Chelatococcus sp. KU-N122


asm_submitter: Graduate School of Engineering, Department of Material and Environmental Chemistry, Utsunomiya University

organism_name: Microbacterium sp. SW12


organism_name: Proteus mirabilis


organism_name: Pseudomonas aeruginosa


organism_name: Acinetobacter baumannii


annotation_name: Annotation submitted by Hiruma Lab Graduate School of Arts and Sciences Department of Life Sciences, The University of Tokyo


annotation_name: Annotation submitted by RIKEN-BRC

annotation_provider: RIKEN-BRC

infraspecific_name: strain=JCM 18999

organism_name: Nocardioides sp. JCM 18999


infraspecific_name: strain=JCM 12992

organism_name: Neisseria mucosa


annotation_name: Annotation submitted by Department of Microbiology and Infectious Diseases, Nara Medical University


annotation_name: Annotation submitted by Research Center for Infectious Disease, Okinawa Prefectural Institute of Health and Environment


annotation_name: Annotation submitted by National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 311909


infraspecific_name: strain=MAFF 311871


infraspecific_name: strain=JCM 16312

organism_name: Defluviitalea saccharophila


organism_name: Klebsiella quasipneumoniae


infraspecific_name: strain=JCM 17210

organism_name: Defluviitoga tunisiensis


organism_name: Escherichia coli


asm_submitter: Laboratory of Soil Biology and Chemistry, Graduate School of Bioagricultural Sciences, Nagoya University

organism_name: Methylosinus sporium


organism_name: Serratia marcescens


infraspecific_name: strain=RIMD 3180009

organism_name: Salmonella enterica subsp. enterica serovar Singapore


annotation_provider: Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)


organism_name: Morganella morganii


annotation_name: Annotation submitted by Iwate University

annotation_provider: Iwate University

asm_submitter: Iwate University

organism_name: Rhizobium leguminosarum


organism_name: Enterobacter hormaechei


annotation_name: Annotation submitted by Terada and Riya Laboratory Chemical engineering Department of Technology, Tokyo university of Agriculture and Technology

organism_name: Azospira sp. I13


annotation_provider: Hiruma Lab Graduate School of Arts and Sciences Department of Life Sciences, The University of Tokyo

organism_name: Brevundimonas sp. Br13


infraspecific_name: strain=JCM 18998

organism_name: Nocardioides sp. JCM 18998


infraspecific_name: strain=JCM 12987

organism_name: Bacteroides nordii WAL 11050 = JCM 12987


organism_name: Acinetobacter baumannii


annotation_provider: Department of Microbiology and Infectious Diseases, Nara Medical University


asm_submitter: Research Center for Infectious Disease, Okinawa Prefectural Institute of Health and Environment


asm_submitter: National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 311910

organism_name: Ralstonia pseudosolanacearum


organism_name: Klebsiella pneumoniae


infraspecific_name: strain=MAFF 311870


infraspecific_name: strain=JCM 14030

organism_name: Clostridium nitrophenolicum


infraspecific_name: strain=JCM 17209

organism_name: Desulfovectis peckii


asm_submitter: CDC


infraspecific_name: strain=RIMD 3175012

organism_name: Salmonella enterica subsp. enterica serovar Saintpaul


organism_name: Leeuwenhoekiella obamensis


annotation_name: Annotation submitted by Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)

organism_name: Bradyrhizobium diazoefficiens


organism_name: Klebsiella aerogenes


asm_submitter: Antimicrobial Resistance Research Center,  National Institute of Infectious Diseases (NIID)

organism_name: Staphylococcus aureus


annotation_name: Annotation submitted by National Chiayi University

annotation_provider: National Chiayi University

asm_submitter: National Chiayi University

excluded_from_refseq: annotation fails completeness check; missing tRNA genes

organism_name: Pseudomonas capsici


asm_submitter: Hiruma Lab Graduate School of Arts and Sciences Department of Life Sciences, The University of Tokyo

organism_name: Paraburkholderia monticola


asm_submitter: RIKEN-BRC

infraspecific_name: strain=JCM 18997

organism_name: Conexibacter sp. JCM 18997


organism_name: Escherichia coli


infraspecific_name: strain=JCM 12822

organism_name: Salinicoccus siamensis


asm_submitter: Department of Microbiology and Infectious Diseases, Nara Medical University


organism_name: Klebsiella quasipneumoniae


infraspecific_name: strain=MAFF 311931


organism_name: Citrobacter freundii


infraspecific_name: strain=MAFF 311869


infraspecific_name: strain=JCM 17239

organism_name: Anaerosalibacter bizertensis


organism_name: Enterobacter hormaechei


asm_submitter: Public Health Agency of Canada

organism_name: Salmonella enterica subsp. enterica serovar Lome


infraspecific_name: strain=JCM 30711

organism_name: Micropepsis pineolensis


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Methylosinus sporium


infraspecific_name: strain=RIMD 1981004

organism_name: Salmonella enterica subsp. enterica serovar Stanley


annotation_name: Annotation submitted by Genetic Resources Center, National Agriculture and Food Research Organization

organism_name: Afipia dichlorophenoxyacetatis


asm_submitter: Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)

organism_name: Bradyrhizobium diazoefficiens


organism_name: Staphylococcus aureus


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

organism_name: Campylobacter coli


infraspecific_name: strain=MAFF 311908

organism_name: Ralstonia pseudosolanacearum


infraspecific_name: strain=MAFF 724010


infraspecific_name: strain=JCM 10723

organism_name: Methanothermus sociabilis


organism_name: Campylobacter upsaliensis


infraspecific_name: strain=JCM 11320

organism_name: Acidilobus aceticus


asm_submitter: FDA


asm_submitter: National Center for Biotechnology Information

organism_name: Enterococcus faecalis


asm_submitter: Genome Information Research Center, Research Institute for Microbial Diseases, Osaka University

infraspecific_name: strain=RIMD 1962002

organism_name: Salmonella enterica subsp. enterica serovar Oranienburg


annotation_name: Annotation submitted by Biological Resource Center, National Institute of Technology and Evaluation (NITE)

organism_name: Aurantivibrio infirmus


asm_submitter: Antimicrobial Resistance Research Center, National Institute of Infectious Diseases


organism_name: Pseudomonas cichorii


organism_name: Acinetobacter sp. Ac8


infraspecific_name: strain=JCM 18996

organism_name: Paenibacillus sp. JCM 18996


infraspecific_name: strain=JCM 12540

organism_name: Thermococcus coalescens


organism_name: Escherichia coli


annotation_name: Annotation submitted by Department of Clinical Laboratory Science Faculty of Health Care, Tenri University

organism_name: Haemophilus influenzae


organism_name: Shinella sp. Sh6


infraspecific_name: strain=JCM 18966

organism_name: Gracilibacillus sp. JCM 18966


infraspecific_name: strain=JCM 12457

organism_name: Thioreductor micantisoli


infraspecific_name: strain=MAFF 106218


infraspecific_name: strain=MAFF 724009


infraspecific_name: strain=JCM 17229

organism_name: Thermoproteus thermophilus


annotation_name: Annotation submitted by Department of Pediatrics, Kyushu University Graduate school of medical sciences

organism_name: Staphylococcus aureus


annotation_name: Annotation submitted by Laboratory of Soil Biology and Chemistry, Graduate School of Bioagricultural Sciences, Nagoya University

organism_name: Methylosinus sporium


annotation_name: Annotation submitted by Genome Information Research Center, Research Institute for Microbial Diseases, Osaka University

infraspecific_name: strain=RIMD 3142025

organism_name: Salmonella enterica subsp. enterica serovar Agona


annotation_provider: Biological Resource Center, National Institute of Technology and Evaluation (NITE)

organism_name: Aurantivibrio plasticivorans


organism_name: Enterococcus faecalis


organism_name: Bradyrhizobium diazoefficiens


annotation_provider: Department of Pediatrics, Kyushu University Graduate school of medical sciences


asm_submitter: Laboratory of Soil Biology and Chemistry, Graduate School of Bioagricultural Sciences, Nagoya University

organism_name: type II methanotrophic bacterium


annotation_provider: Genome Information Research Center, Research Institute for Microbial Diseases, Osaka University

infraspecific_name: strain=RIMD 1924007

organism_name: Salmonella enterica subsp. enterica serovar Cerro


asm_submitter: Biological Resource Center, National Institute of Technology and Evaluation (NITE)

organism_name: Halioxenophilus aromaticivorans


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


annotation_provider: Department of Clinical Laboratory Science Faculty of Health Care, Tenri University


organism_name: Pseudomonas sp. Pso3


infraspecific_name: strain=JCM 18905

organism_name: Vibrio sp. JCM 18905


infraspecific_name: strain=JCM 12389

organism_name: Salinibacillus aidingensis


organism_name: Escherichia coli


asm_submitter: Research Center for Infectious Disease, Okinawa Prefectural Institute of Health and Environment


asm_submitter: National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 106217

organism_name: Ralstonia pseudosolanacearum


organism_name: Salmonella enterica subsp. enterica serovar Infantis


infraspecific_name: strain=MAFF 106245


infraspecific_name: strain=JCM 13583

organism_name: Thermogymnomonas acidicola JCM 13583


asm_submitter: Department of Clinical Laboratory Science Faculty of Health Care, Tenri University

organism_name: Haemophilus influenzae


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


annotation_name: Annotation submitted by Fukushima University

annotation_provider: Fukushima University

asm_submitter: Fukushima University

organism_name: Gordonia sp. J1A


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Enterococcus faecalis


infraspecific_name: strain=JCM 18903

organism_name: Psychrobacter sp. JCM 18903


infraspecific_name: strain=JCM 12314

organism_name: Thermus kawarayensis JCM 12314


annotation_name: Annotation submitted by Rakuno Gakuen University

annotation_provider: Rakuno Gakuen University

asm_submitter: Rakuno Gakuen University

organism_name: Mycoplasmopsis bovis


infraspecific_name: strain=MAFF 106216


infraspecific_name: strain=MAFF 724008


annotation_name: Annotation submitted by RIKEN-BRC

asm_submitter: RIKEN-BRC

infraspecific_name: strain=JCM 10828

organism_name: Thermococcus aegaeus


asm_submitter: Department of Pediatrics, Kyushu University Graduate school of medical sciences

organism_name: Staphylococcus aureus


organism_name: type II methanotrophic bacterium


infraspecific_name: strain=RIMD 1982025

organism_name: Salmonella enterica subsp. enterica serovar Thompson


infraspecific_name: strain=IMCC 1962

organism_name: Eionea flava


organism_name: Bradyrhizobium diazoefficiens


annotation_name: Annotation submitted by Kyoto University

annotation_provider: Kyoto University

asm_submitter: Kyoto University

organism_name: Sphingobium sp. TomTYG74


annotation_name: Annotation submitted by National Chung Hsing University

annotation_provider: National Chung Hsing University

asm_submitter: National Chung Hsing University

organism_name: Enterobacteriaceae bacterium


annotation_name: Annotation submitted by National Research Institute of Police Science

infraspecific_name: strain=Pasteur II No. 30

organism_name: Bacillus anthracis


infraspecific_name: strain=JCM 18902

organism_name: Psychrobacter sp. JCM 18902


organism_name: Thauera sp. DNT-1


annotation_name: Annotation submitted by Department of Microbiology and Infectious Diseases, Nara Medical University

organism_name: Escherichia coli


annotation_name: Annotation submitted by National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 106215

organism_name: Ralstonia pseudosolanacearum


organism_name: Enterococcus faecalis


annotation_provider: National Agriculture and Food Research Organization

infraspecific_name: strain=MAFF 724005


infraspecific_name: strain=JCM 11281

organism_name: Methanosarcina baltica


annotation_provider: Laboratory of Soil Biology and Chemistry, Graduate School of Bioagricultural Sciences, Nagoya University

organism_name: Methylocystis echinoides


infraspecific_name: strain=RIMD 1985055

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


annotation_name: Annotation submitted by Division of Anaerobe Research, Life Science Research Center, Gifu, University

organism_name: Peptostreptococcus porci


annotation_name: Annotation submitted by Institute for Agro-Environmental Science, National Agriculture and Food Research Organization (NARO)


organism_name: Sphingobium sp. TomTYG73


annotation_name: Annotation submitted by Antimicrobial Resistance Research Center, National Institute of Infectious Diseases

organism_name: Staphylococcus aureus


organism_name: Neisseriaceae bacterium


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

organism_name: Enterococcus faecium


annotation_name: Annotation submitted by Microbiology and Infectious Diseases, Nara Medical University


annotation_name: Annotation submitted by Department of Clinical Laboratory Science Faculty of Health Care, Tenri University

organism_name: Haemophilus influenzae


annotation_name: Annotation submitted by Tokai university

annotation_provider: Tokai university

asm_submitter: Tokai university

infraspecific_name: strain=TOKAI 759m

organism_name: Pediococcus pentosaceus


annotation_provider: RIKEN-BRC

infraspecific_name: strain=JCM 18901

organism_name: Psychrobacter sp. JCM 18901


infraspecific_name: strain=JCM 12291

organism_name: Marinobacter alkaliphilus


asm_submitter: Department of Microbiology and Infectious Diseases, Nara Medical University


organism_name: Mycoplasmopsis bovis


infraspecific_name: strain=MAFF 106214


infraspecific_name: strain=MAFF 106253


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Agona


infraspecific_name: strain=JCM 31065

organism_name: Maridesulfovibrio salinus


organism_name: Escherichia coli


annotation_name: Annotation submitted by Department of Pediatrics, Kyushu University Graduate school of medical sciences


annotation_name: Annotation submitted by Laboratory of Soil Biology and Chemistry, Graduate School of Bioagricultural Sciences, Nagoya University

organism_name: type I methanotrophic bacterium


organism_name: Salmonella enterica subsp. enterica serovar Infantis


annotation_name: Annotation submitted by Genome Information Research Center, Research Institute for Microbial Diseases, Osaka University

organism_name: Vibrio parahaemolyticus


annotation_name: Annotation submitted by Super-cutting-edge Grand and Advanced Research (SUGAR) Program Institute for Extra-cutting-edge Science and Technology Avant-garde Research (X-star), Japan Agency for Marine-Earth Science and Technology