infraspecific_name: strain=Legionella

organism_name: Legionella pneumophila


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: USDA FSIS

assembly_level: Contig

assembly_type: haploid

excluded_from_refseq: from large multi-isolate project

genome_rep: Full

group: bacteria

organism_name: Campylobacter jejuni

release_type: Major

version_status: latest


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Escherichia coli


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


asm_submitter: CDC


organism_name: Shigella flexneri


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Eko


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Salmonella enterica subsp. enterica serovar Rubislaw


organism_name: Salmonella enterica subsp. enterica serovar Cerro


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


asm_submitter: UCIBIO/REQUIMTE, Faculty of Pharmacy, University of Porto

excluded_from_refseq: contaminated

organism_name: Gardnerella leopoldii

paired_asm_comp: identical


organism_name: Salmonella enterica subsp. enterica serovar Brandenburg


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: National Center for Biotechnology Information

isolate: ECDC 0459

organism_name: Acinetobacter baumannii


asm_submitter: University of Pavia

organism_name: [Borrelia] lusitaniae


asm_submitter: FDA-CVM

organism_name: Aeromonas salmonicida


asm_submitter: National Institute for Communicable Disease Control and Prevention, China CDC

assembly_level: Scaffold

organism_name: Streptococcus pyogenes


organism_name: Escherichia coli


asm_submitter: Centers for Disease Control and Prevention


organism_name: Klebsiella pneumoniae


organism_name: Citrobacter freundii


organism_name: Klebsiella quasipneumoniae


isolate: G_12a Single Isolate

organism_name: Staphylococcus aureus


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


isolate: B_12a Single Isolate


isolate: A_18e Single Isolate


isolate: A_12a Single Isolate


isolate: A_8b Single Isolate


isolate: A_6e Single Isolate


isolate: A_16a Single Isolate


isolate: A_3e Single Isolate


isolate: E_12c Single Isolate


isolate: E_12e Single Isolate


isolate: E_13a Single Isolate


isolate: E_13b Single Isolate


isolate: E_13c Single Isolate


isolate: E_13d Single Isolate


isolate: E_13e Single Isolate


isolate: G_12b Single Isolate


isolate: E_14b Single Isolate


isolate: E_15d Single Isolate


isolate: E_14e Single Isolate


isolate: E_15e Single Isolate


isolate: G_12c Single Isolate


isolate: E_16a Single Isolate


isolate: E_16c Single Isolate


isolate: E_16d Single Isolate


isolate: E_18a Single Isolate


isolate: E_18b Single Isolate


isolate: E_18d Single Isolate


isolate: E_19a Single Isolate


isolate: G_12d Single Isolate


isolate: E_5d Single Isolate


isolate: E_5b Single Isolate


isolate: E_5e Single Isolate


isolate: E_7b Single Isolate


isolate: E_7c Single Isolate


isolate: E_8b Single Isolate


isolate: E_8d Single Isolate


isolate: E_9c Single Isolate


isolate: E_9d Single Isolate


isolate: G_2d Single Isolate


isolate: G_2c Single Isolate


isolate: G_2e Single Isolate


isolate: G_3a Single Isolate


isolate: G_3b Single Isolate


isolate: G_10c Single Isolate


isolate: G_3d Single Isolate


isolate: G_3e Single Isolate


isolate: G_4a Single Isolate


isolate: G_4b Single Isolate


isolate: G_4e Single Isolate


isolate: G_4d Single Isolate


isolate: G_10d Single Isolate


organism_name: Campylobacter coli


isolate: G_5a Single Isolate


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


isolate: A_18d Single Isolate


isolate: C_8a Single Isolate


isolate: C_7b Single Isolate


isolate: C_5d Single Isolate


isolate: C_5c Single Isolate


isolate: C_5b Single Isolate


isolate: C_6d Single Isolate


isolate: C_4c Single Isolate


isolate: C_2e Single Isolate


isolate: C_3b Single Isolate


isolate: C_2c Single Isolate


isolate: A_1e Single Isolate


isolate: A_3a Single Isolate


isolate: A_16d Single Isolate


isolate: A_19b Single Isolate


isolate: A_18c Single Isolate


isolate: A_18b Single Isolate


isolate: A_18a Single Isolate


isolate: A_19d Single Isolate


isolate: C_1c Single Isolate


isolate: C_12d Single Isolate


isolate: C_12a Single Isolate


isolate: C_11e Single Isolate


isolate: C_10e Single Isolate


isolate: D_9e Single Isolate


isolate: A_2d Single Isolate


isolate: A_15d Single Isolate


isolate: A_1c Single Isolate


isolate: A_4c Single Isolate


isolate: A_3d Single Isolate


isolate: A_6b Single Isolate


isolate: A_8c Single Isolate


isolate: A_6d Single Isolate


isolate: A_11d Single Isolate


isolate: C_6e Single Isolate


isolate: A_17a Single Isolate


isolate: C_9b Single Isolate


isolate: D_7c Single Isolate


isolate: D_5b Single Isolate


isolate: D_12d Single Isolate


isolate: D_2b Single Isolate


isolate: A_19e Single Isolate


isolate: D_11d Single Isolate


isolate: D_12a Single Isolate


isolate: A_14d Single Isolate


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


isolate: A_12e Single Isolate


isolate: A_17b Single Isolate


isolate: A_1a Single Isolate


isolate: A_5a Single Isolate


isolate: A_9b Single Isolate


isolate: A_16c Single Isolate


isolate: A_3b Single Isolate


isolate: A_6c Single Isolate


isolate: A_7d Single Isolate


isolate: A_1b Single Isolate


isolate: A_10d Single Isolate


isolate: E_18c Single Isolate


isolate: E_19e Single Isolate


isolate: E_6c Single Isolate


isolate: E_6e Single Isolate


isolate: E_8a Single Isolate


isolate: G_4c Single Isolate


isolate: G_5b Single Isolate


isolate: G_5d Single Isolate


isolate: G_5e Single Isolate


isolate: G_6b Single Isolate


isolate: G_6c Single Isolate


isolate: G_6e Single Isolate


isolate: G_10e Single Isolate


isolate: G_8a Single Isolate


isolate: G_8b Single Isolate


isolate: G_8c Single Isolate


isolate: G_8d Single Isolate


isolate: G_8e Single Isolate


isolate: G_9a Single Isolate


isolate: B_1d Single Isolate


isolate: B_1e Single Isolate


isolate: G_11d Single Isolate


isolate: B_2b Single Isolate


isolate: B_2c Single Isolate


isolate: B_2e Single Isolate


isolate: B_6b Single Isolate


isolate: B_6c Single Isolate


isolate: B_6d Single Isolate


isolate: B_9a Single Isolate


isolate: B_9b Single Isolate


isolate: B_9c Single Isolate


isolate: B_9e Single Isolate


isolate: E_11b Single Isolate


isolate: E_11c Single Isolate


isolate: E_11d Single Isolate


organism_name: Salmonella enterica subsp. enterica serovar Albany


organism_name: Salmonella enterica subsp. enterica serovar Anatum


isolate: C_8e Single Isolate


isolate: C_8d Single Isolate


isolate: C_7e Single Isolate


isolate: C_8b Single Isolate


isolate: C_7d Single Isolate


isolate: C_7c Single Isolate


isolate: C_5a Single Isolate


isolate: C_3e Single Isolate


isolate: C_3d Single Isolate


isolate: C_3c Single Isolate


isolate: C_6c Single Isolate


isolate: C_2d Single Isolate


isolate: C_3a Single Isolate


isolate: A_8a Single Isolate


isolate: A_12d Single Isolate


isolate: A_12b Single Isolate


isolate: A_16b Single Isolate


isolate: A_5c Single Isolate


isolate: A_5e Single Isolate


isolate: A_7e Single Isolate


isolate: A_10b Single Isolate


isolate: A_10c Single Isolate


isolate: A_14b Single Isolate


isolate: A_8e Single Isolate


isolate: A_2b Single Isolate


isolate: A_17c Single Isolate


isolate: C_2a Single Isolate


isolate: C_2b Single Isolate


isolate: C_1a Single Isolate


isolate: C_12e Single Isolate


isolate: C_12c Single Isolate


isolate: C_11c Single Isolate


isolate: C_11b Single Isolate


isolate: C_11a Single Isolate


isolate: C_6a Single Isolate


isolate: C_10c Single Isolate


isolate: C_10b Single Isolate


isolate: C_6b Single Isolate


isolate: D_9d Single Isolate


isolate: D_9b Single Isolate


isolate: D_9c Single Isolate


isolate: D_9a Single Isolate


isolate: D_1e Single Isolate


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


isolate: D_8e Single Isolate


isolate: A_9e Single Isolate


isolate: A_19a Single Isolate


isolate: A_9d Single Isolate


isolate: A_9a Single Isolate


isolate: A_15e Single Isolate


isolate: A_15c Single Isolate


isolate: A_7a Single Isolate


isolate: A_15a Single Isolate


isolate: A_8d Single Isolate


isolate: A_4e Single Isolate


isolate: A_13d Single Isolate


isolate: A_3c Single Isolate


isolate: A_5b Single Isolate


isolate: A_13c Single Isolate


isolate: A_13a Single Isolate


isolate: A_13b Single Isolate


isolate: A_5d Single Isolate


isolate: A_11c Single Isolate


isolate: A_11b Single Isolate


isolate: A_11a Single Isolate


isolate: C_9c Single Isolate


isolate: C_9e Single Isolate


isolate: D_8d Single Isolate


isolate: D_8b Single Isolate


isolate: D_1c Single Isolate


isolate: D_1b Single Isolate


isolate: D_1a Single Isolate


isolate: D_8a Single Isolate


isolate: D_7e Single Isolate


isolate: D_7d Single Isolate


isolate: D_7a Single Isolate


isolate: D_7b Single Isolate


isolate: D_6e Single Isolate


isolate: D_6c Single Isolate


isolate: D_6d Single Isolate


isolate: D_6b Single Isolate


isolate: D_6a Single Isolate


isolate: D_5e Single Isolate


isolate: D_5d Single Isolate


isolate: D_5c Single Isolate


isolate: D_5a Single Isolate


isolate: D_4e Single Isolate


isolate: D_4d Single Isolate


isolate: D_4c Single Isolate


isolate: D_4b Single Isolate


isolate: D_4a Single Isolate


isolate: D_3e Single Isolate


isolate: A_2e Single Isolate


isolate: D_3c Single Isolate


isolate: D_3d Single Isolate


isolate: D_3b Single Isolate


isolate: D_3a Single Isolate


isolate: D_2e Single Isolate


isolate: D_2d Single Isolate


isolate: D_2a Single Isolate


isolate: D_12e Single Isolate


isolate: D_12c Single Isolate


isolate: D_11e Single Isolate


isolate: D_11b Single Isolate


isolate: D_10e Single Isolate


isolate: D_10b Single Isolate


isolate: A_6a Single Isolate


isolate: A_14e Single Isolate


isolate: E_6d Single Isolate


isolate: B_1c Single Isolate


isolate: B_2a Single Isolate


isolate: G_9b Single Isolate


isolate: G_9c Single Isolate


isolate: G_9d Single Isolate


isolate: G_11a Single Isolate


isolate: B_10a Single Isolate


isolate: B_10c Single Isolate


isolate: B_10d Single Isolate


isolate: B_10e Single Isolate


isolate: B_11a Single Isolate


isolate: B_11c Single Isolate


isolate: B_11e Single Isolate


isolate: B_12b Single Isolate


isolate: B_12c Single Isolate


isolate: B_12d Single Isolate


isolate: B_12e Single Isolate


isolate: B_13b Single Isolate


isolate: B_13e Single Isolate


isolate: B_13c Single Isolate


isolate: B_14c Single Isolate


isolate: G_11c Single Isolate


isolate: B_14b Single Isolate


isolate: B_14e Single Isolate


organism_name: Shigella flexneri


organism_name: Yersinia enterocolitica


isolate: C_8c Single Isolate


asm_submitter: Osun state university

organism_name: Pseudomonas aeruginosa


organism_name: Stenotrophomonas muris


asm_submitter: ARRIAM

assembly_level: Complete Genome

organism_name: Bradyrhizobium diazoefficiens


isolate: A_2a Single Isolate

organism_name: Staphylococcus aureus


isolate: A_9c Single Isolate


isolate: A_13e Single Isolate


organism_name: Serratia marcescens


asm_submitter: Portland State University

excluded_from_refseq: derived from metagenome; genus undefined

group: archaea

organism_name: Nanobdellales archaeon


organism_name: Escherichia coli


isolate: C_9d Single Isolate


organism_name: Nanobdellaceae archaeon


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined


isolate: A_19c Single Isolate


organism_name: Nanoarchaeaceae archaeon


organism_name: Shigella sonnei


organism_name: Klebsiella pneumoniae


isolate: A_10e Single Isolate


isolate: A_14a Single Isolate


isolate: E_9b Single Isolate


isolate: B_13a Single Isolate


isolate: E_19b Single Isolate


isolate: A_15b Single Isolate


annotation_name: Annotation submitted by Department of Bacterial Genetics, Faculty of Biology, University of Warsaw

organism_name: Cronobacter sakazakii


asm_submitter: IFSC USP

organism_name: Enterobacter cloacae


asm_submitter: Ocean University Of China

organism_name: Abyssisolibacter sp. ZYX002


asm_submitter: Anhui University of Chinese Medicine

organism_name: Pantoea sp. nfd-35


asm_submitter: Ocean University of China

organism_name: Vibrio alginolyticus


asm_submitter: Vanderbilt University Medical Center

organism_name: Staphylococcus saprophyticus


asm_submitter: Pavol Jozef Safarik University in Kosice, Faculty of Science

organism_name: Haladaptatus sp. HS23


asm_submitter: Institute of Deep-sea Science and Engineering,CAS

organism_name: Nitrososphaerales archaeon


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Candidatus Nitrosopumilus sp.


organism_name: Nitrosopumilaceae archaeon


asm_submitter: Sri Balaji Vidyapeeth


asm_submitter: Los Angeles County Public Health Lab microbial pathogen submission group

organism_name: Pseudomonas aeruginosa


organism_name: Acinetobacter baumannii


organism_name: Escherichia coli


organism_name: Enterococcus avium


organism_name: Neisseria meningitidis


organism_name: Neisseria gonorrhoeae


organism_name: Streptococcus pyogenes


organism_name: Streptococcus pneumoniae


asm_submitter: USDA-ARS

organism_name: Streptomyces mutabilis


organism_name: Kitasatospora papulosa


asm_submitter: Hannam University

organism_name: Dyadobacter sp. HNCC25DJ183


organism_name: Dyadobacter sp. HNCC25DJ185


organism_name: Dyadobacter sp. HNCC25DJ184


organism_name: Dyadobacter sp. HNCC25DJ186


organism_name: Dyadobacter sp. HNCC25DJ187


asm_submitter: Noakhali Science and Technology Uniersity

organism_name: Wohlfahrtiimonas chitiniclastica


asm_submitter: USDA

organism_name: Streptococcus dysgalactiae


asm_submitter: First Affiliated Hospital of Medicine School, Zhejiang University

organism_name: Salmonella enterica


asm_submitter: Polar Research Institute of China

organism_name: Pseudomonas sp. GW-45


asm_submitter: Zhejiang Provincial People's Hospital

organism_name: Pseudomonas aeruginosa


asm_submitter: Shanxi Medical University

organism_name: Microlunatus sp. M237


asm_submitter: Affiliated Sixth People's Hospital South Campus

isolate: Food


asm_submitter: University of California, Berkeley - Shapira Lab

organism_name: Pantoea phytostimulans


asm_submitter: Hatay Mustafa Kemal University BAP

organism_name: Streptococcus equi subsp. equi


asm_submitter: Flanders Research Institute for Agriculture, Fisheries and Food (ILVO)

infraspecific_name: strain=GBBC 1321B2

organism_name: Ralstonia pseudosolanacearum


asm_submitter: Xinjiang Agricultural University

organism_name: Lacticaseibacillus casei


infraspecific_name: strain=NCPPB 4821


asm_submitter: University of Science and Technology Beijing

organism_name: Niallia circulans


asm_submitter: Guizhou Medical University

organism_name: Gemelliphila sp. 1F1


organism_name: Pseudobacillus badius


infraspecific_name: strain=Pm-DY

isolate: Sheep

organism_name: Pasteurella multocida


asm_submitter: anhui science and technology university

organism_name: Providencia stuartii


infraspecific_name: strain=NCPPB 4823


infraspecific_name: strain=NCPPB 4694


infraspecific_name: strain=NCPPB 4822


asm_submitter: St. Marianna University School of Medicine

organism_name: Atlantibacter hermannii


infraspecific_name: strain=NCPPB 4824


asm_submitter: UFRGS

organism_name: Pseudomonas sputi


asm_submitter: Research Center of Biotechnology

excluded_from_refseq: genus undefined

organism_name: Halobacteroidaceae bacterium Z-7191


asm_submitter: Chinese Center for Disease Control and Prevention

organism_name: Rickettsia japonica


asm_submitter: Anhui Science and Technology university

organism_name: Staphylococcus chromogenes


asm_submitter: South China Agricultural University

organism_name: Pectobacterium colocasium


asm_submitter: First Affiliated Hospital of Medicine School, Zhejiang University

organism_name: Salmonella enterica


asm_submitter: University Hospital Lozenets

organism_name: Klebsiella pneumoniae


organism_name: Enterobacter hormaechei


organism_name: Proteus mirabilis


asm_submitter: China CDC

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

isolate: Human

organism_name: Chlamydia psittaci


asm_submitter: GLA University

organism_name: Mycobacterium avium subsp. paratuberculosis


asm_submitter: Huaibei normal university

organism_name: Acinetobacter bereziniae


asm_submitter: Ege University

organism_name: Acetobacter pasteurianus


organism_name: Mycetocola sp. Y442


asm_submitter: sultan moulay slimane university

organism_name: Klebsiella pneumoniae subsp. pneumoniae


asm_submitter: Zhejiang University

organism_name: Burkholderiales bacterium


organism_name: Tsuneonella sp.


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Gillisia sp.


organism_name: Bacteroidales bacterium


organism_name: Chitinophagaceae bacterium


organism_name: Candidatus Microgenomatia bacterium


organism_name: Candidatus Bathycorpusculaceae archaeon


organism_name: Thermodesulfovibrionales bacterium


organism_name: Thiobacillus sp.


organism_name: Ignavibacteriaceae bacterium


organism_name: Geobacteraceae bacterium


excluded_from_refseq: derived from metagenome

organism_name: Perlucidibaca sp.


organism_name: Candidatus Zixiibacteriota bacterium


organism_name: Candidatus Defluviilinea sp.


organism_name: Pseudomonas sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Terriglobales bacterium


organism_name: Acidihalobacter sp.


organism_name: Candidatus Micrarchaeaceae archaeon


organism_name: Thermoplasmataceae archaeon


organism_name: Acidimicrobiales bacterium


organism_name: Thiohalophilaceae bacterium


organism_name: Candidatus Limnocylindrales bacterium


organism_name: Sulfurimonadaceae bacterium


organism_name: Mariprofundaceae bacterium


organism_name: Rhodanobacteraceae bacterium


organism_name: Candidatus Acidiferrales bacterium


organism_name: Longimicrobiales bacterium


organism_name: Acidithrix sp.


organism_name: Paracoccaceae bacterium


organism_name: Sulfurivermis sp.


organism_name: Leptospirillaceae bacterium


organism_name: Solirubrobacteraceae bacterium


organism_name: Solirhodobacter sp.


organism_name: Limisphaerales bacterium


organism_name: Candidatus Sysuiplasmataceae archaeon


organism_name: Terriglobia bacterium


organism_name: Steroidobacteraceae bacterium


organism_name: Acidimicrobiales bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Gallionellaceae bacterium


organism_name: Kordiimonas marina


organism_name: Gammaproteobacteria bacterium


organism_name: Thiohalophilaceae bacterium


organism_name: Candidatus Limnocylindrales bacterium


organism_name: Burkholderiales bacterium


organism_name: Ferrovibrionaceae bacterium


organism_name: Hydrogenovibrio sp.


organism_name: Paludibacter sp.


organism_name: Mariprofundaceae bacterium


organism_name: Nitrososphaerales archaeon


asm_submitter: Kangwon National University

infraspecific_name: strain=NCCP 17173

organism_name: Escherichia coli


infraspecific_name: strain=NCCP 17172


infraspecific_name: strain=NCCP 17171


infraspecific_name: strain=NCCP 17170


infraspecific_name: strain=NCCP 17169


infraspecific_name: strain=NCCP 15739


infraspecific_name: strain=NCCP 14541


infraspecific_name: strain=NCCP 13983


infraspecific_name: strain=NCCP 13963


infraspecific_name: strain=NCCP 13946


infraspecific_name: strain=NCCP 13924


infraspecific_name: strain=NCCP 13918


infraspecific_name: strain=NCCP 13907


infraspecific_name: strain=NCCP 13914


infraspecific_name: strain=NCCP 13906


infraspecific_name: strain=NCCP 13905


infraspecific_name: strain=NCCP 13894


infraspecific_name: strain=NCCP 13892


asm_submitter: Los Angeles County Public Health Lab microbial pathogen submission group

organism_name: Klebsiella michiganensis


asm_submitter: Democritus University of Thrace

organism_name: Streptomyces geysiriensis


asm_submitter: Qingdao University

organism_name: Shigella flexneri


asm_submitter: Zhejiang Provincial People's Hospital

organism_name: Pseudomonas aeruginosa


organism_name: Acidiferrobacterales bacterium


organism_name: Rhizomicrobium sp.


organism_name: Steroidobacteraceae bacterium


organism_name: Solirubrobacterales bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Desulfosalsimonadaceae bacterium


organism_name: Halothiobacillus sp.


organism_name: Acidimicrobiales bacterium


organism_name: Thiohalophilaceae bacterium


organism_name: Thermoplasmata archaeon


organism_name: Alphaproteobacteria bacterium


organism_name: Ferrovibrionaceae bacterium


organism_name: Desulfobacterales bacterium


organism_name: Burkholderiales bacterium


organism_name: Celerinatantimonadaceae bacterium


organism_name: Paenibacillales bacterium


organism_name: Terriglobales bacterium


organism_name: Trueperaceae bacterium


organism_name: Mariprofundaceae bacterium


organism_name: Nitrososphaerales archaeon


organism_name: Acidimangrovimonas sp.


organism_name: Candidatus Sysuiplasmataceae archaeon


organism_name: Thermoplasmataceae archaeon


organism_name: Paracoccaceae bacterium


organism_name: Myxococcota bacterium


organism_name: Kordiimonas marina


organism_name: Candidatus Rariloculaceae bacterium


organism_name: Binataceae bacterium (SeqCode)


organism_name: Bacteroidota bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Sphingobium sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Mangrovitalea sp.


organism_name: Gallionellaceae bacterium


organism_name: Neptunicella sp.


organism_name: Candidatus Acidiferrales bacterium


organism_name: Lutibacter sp.


organism_name: Thermoplasmata archaeon


organism_name: Rhizomicrobium sp.


organism_name: Hydrogenovibrio sp.


organism_name: Acidihalobacter sp.


organism_name: Alteromonadaceae bacterium


organism_name: Terriglobia bacterium


asm_submitter: National Center for Biotechnology Information

organism_name: Streptococcus pyogenes


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Meleagridis


organism_name: Salmonella enterica subsp. enterica serovar Hadar


asm_submitter: USDA FSIS

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Agona


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


organism_name: Salmonella enterica subsp. enterica serovar Uganda


asm_submitter: Health Protection Agency

organism_name: Shigella flexneri


organism_name: Escherichia coli


infraspecific_name: strain=Inaba

organism_name: Vibrio cholerae


infraspecific_name: strain=Ogawa


asm_submitter: Public Health England

organism_name: Yersinia enterocolitica


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Klebsiella aerogenes


organism_name: Campylobacter lari


organism_name: Shigella sonnei


asm_submitter: CDC


asm_submitter: Israel Oceanography and Limnology Reseearch

assembly_level: Chromosome

organism_name: Microcystis aeruginosa C-1004


organism_name: Salmonella enterica subsp. enterica serovar Muenster


isolate: A_17e Single Isolate

organism_name: Staphylococcus aureus


isolate: C_5e Single Isolate


organism_name: Salmonella enterica subsp. enterica serovar Hadar


isolate: A_4d Single Isolate


isolate: D_10d Single Isolate


isolate: D_12b Single Isolate


isolate: D_10a Single Isolate


isolate: G_10a Single Isolate


isolate: E_15b Single Isolate


isolate: E_5c Single Isolate


isolate: E_6a Single Isolate


isolate: G_12e Single Isolate


isolate: E_7a Single Isolate


isolate: B_10b Single Isolate


isolate: B_6a Single Isolate


isolate: B_14a Single Isolate


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Acinetobacter baumannii


asm_submitter: The University of Hong Kong

organism_name: Candidatus Alistipes avistercoris


organism_name: Negativibacillus sp.


organism_name: Alistipes communis


infraspecific_name: strain=Legionella

organism_name: Legionella pneumophila


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


organism_name: Campylobacter upsaliensis


organism_name: Shigella flexneri


organism_name: Vibrio cholerae


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica


asm_submitter: Velleja Research

organism_name: Bifidobacterium bifidum


asm_submitter: Northeast Agricultural University

organism_name: Parageobacillus caldoxylosilyticus


asm_submitter: Bangladesh Council of Scientific and Industrial Research (BCSIR)

organism_name: Burkholderia cenocepacia


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar Eko


asm_submitter: Georg-August-University Goettingen

infraspecific_name: strain=DSM 15750

isolate: TLO

organism_name: Thermoanaerobacter thermohydrosulfuricus subsp. carboxydovorans

relation_to_type_material: assembly from type material


organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: FDA-CVM

organism_name: Vibrio parahaemolyticus


asm_submitter: FDA Center for Food Safety and Applied Nutrition


organism_name: Salmonella enterica subsp. enterica serovar Soerenga


asm_submitter: National Center for Biotechnology Information

organism_name: Neisseria gonorrhoeae


asm_submitter: FDA

organism_name: Enterococcus faecium


asm_submitter: Shangqiu Normal University

organism_name: Enterococcus hirae


organism_name: Salmonella enterica subsp. enterica serovar Schwarzengrund


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Escherichia coli


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Albany


organism_name: Salmonella enterica subsp. enterica serovar London


organism_name: Citrobacter freundii


organism_name: Campylobacter jejuni


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


asm_submitter: USDA FSIS


organism_name: Campylobacter coli


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Serratia marcescens


organism_name: Vibrio cholerae


organism_name: Streptococcus pyogenes


infraspecific_name: strain=subspecies multocida

organism_name: Pasteurella multocida


organism_name: Salmonella enterica


organism_name: Escherichia coli


asm_submitter: C.N.R. - Institute for Biological Resources and Marine Biotechnology (IRBIM)

organism_name: Natronoarchaeum rubrum


asm_submitter: Indian Institute of Science Education and Research Mohali

organism_name: Billgrantia sp. NRB1


asm_submitter: Christ college

organism_name: Enterococcus casseliflavus


asm_submitter: Bursa Uludag University Faculty Of Medicine

organism_name: Klebsiella pneumoniae


asm_submitter: THE UNIVERSITY OF HONG KONG

organism_name: Streptococcus sp. HKU76


asm_submitter: University of Pretoria


organism_name: Enterococcus faecalis


organism_name: Enterococcus faecium


organism_name: Enterococcus gallinarum


organism_name: Enterococcus hirae


organism_name: Enterococcus durans


asm_submitter: Jiangxi Cancer Hospital

organism_name: Stenotrophomonas hibiscicola


organism_name: Stenotrophomonas maltophilia


organism_name: Stenotrophomonas geniculata


excluded_from_refseq: unverified source organism


asm_submitter: Chinese Center for Disease Control and Prevention

organism_name: Enterococcus sp. LJL128


organism_name: Pasteurella multocida


organism_name: Enterococcus sp. LJL90


asm_submitter: National Yang Ming Chiao Tung University

organism_name: Bifidobacterium pseudocatenulatum


asm_submitter: University of Sao Paulo

organism_name: Bacillus cereus


organism_name: Ensifer sp. 38_S197


organism_name: Priestia aryabhattai


organism_name: bacterium 33_S180


organism_name: bacterium 26_S150


organism_name: Saccharococcus sp. 23_S122


organism_name: Cohnella laeviribosi


asm_submitter: Agroscope

infraspecific_name: strain=FAM 16960

organism_name: Streptococcus thermophilus


asm_submitter: ICMR - National Institute for Research in Bacterial Infections

organism_name: Bacillus velezensis


asm_submitter: Korea Food Research Institute

organism_name: Lactobacillus amylovorus


organism_name: Limosilactobacillus reuteri


asm_submitter: Zhejiang University

organism_name: Nitrospirota bacterium


asm_submitter: iiCON

organism_name: Pseudomonas monsensis


organism_name: Burkholderiaceae bacterium


asm_submitter: National Center for Biotechnology Information

organism_name: Pasteurella multocida


organism_name: Anaerolineae bacterium


organism_name: Candidatus Woesearchaeota archaeon


organism_name: Dissulfurispiraceae bacterium


organism_name: Blastocatellia bacterium


organism_name: Ignavibacteria bacterium


organism_name: Thermodesulfovibrionales bacterium


organism_name: Thermoplasmata archaeon


organism_name: Candidatus Methylomirabilia bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Longimicrobiales bacterium


organism_name: Alcanivoracaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Gemmatimonadales bacterium


organism_name: Acidobacteriota bacterium


organism_name: Candidatus Krumholzibacteriia bacterium


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Fodinibius sp.


organism_name: Pasteurella multocida


organism_name: Kiloniellales bacterium


organism_name: Staphylococcus aureus


organism_name: Halofilum sp. (in: g-proteobacteria)


organism_name: Chitinophagales bacterium


organism_name: Candidatus Rariloculaceae bacterium


organism_name: Candidatus Palauibacteraceae bacterium


organism_name: Pelagibius sp.


organism_name: Candidatus Multivoradales bacterium


organism_name: Candidatus Lucifugimonadaceae bacterium


organism_name: Longimicrobiales bacterium


organism_name: Balneolaceae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Afifellaceae bacterium


asm_submitter: CDC

organism_name: Escherichia coli


organism_name: Acidimicrobiia bacterium


organism_name: Candidatus Krumholzibacteriia bacterium


organism_name: Candidatus Eutrophocola sp.


organism_name: Woeseiaceae bacterium


organism_name: Pasteurella multocida


organism_name: Myxococcota bacterium


organism_name: Oleispira sp.


organism_name: Anaerolineales bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Candidatus Rariloculaceae bacterium


organism_name: Candidatus Palauibacter sp.


organism_name: Planctomycetaceae bacterium


organism_name: bacterium


organism_name: Thermohalobaculum sp.


organism_name: Lysobacterales bacterium


organism_name: Alcanivorax sp.


organism_name: Thiohalomonadaceae bacterium


organism_name: Promineifilaceae bacterium (SeqCode)


organism_name: Alcanivoracaceae bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Candidatus Palauibacteraceae bacterium


organism_name: Gemmatimonadota bacterium


organism_name: Pasteurella multocida


organism_name: Thermodesulfovibrionales bacterium


organism_name: Polyangiaceae bacterium


organism_name: Candidatus Eiseniibacteriota bacterium


organism_name: Thiohalophilus sp.


organism_name: Methylophilaceae bacterium


organism_name: Perlucidibaca sp.


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome

organism_name: Parasphingorhabdus sp.


organism_name: Staphylococcus aureus


organism_name: Paracoccaceae bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Burkholderiaceae bacterium


organism_name: Lysobacterales bacterium


organism_name: Gemmatimonadales bacterium


organism_name: Rhodothermales bacterium


organism_name: bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Longimicrobiales bacterium


organism_name: Polyangiales bacterium


organism_name: Ilumatobacter sp.


organism_name: Candidatus Rariloculaceae bacterium


organism_name: Labilithrix sp.


organism_name: Lysobacteraceae bacterium


organism_name: Nitrospira sp.


organism_name: Pseudomonas sp.


organism_name: Staphylococcus aureus


organism_name: Chitinophagales bacterium


organism_name: Bacteroidota bacterium


organism_name: Myxococcota bacterium


organism_name: Bryobacterales bacterium


organism_name: Acidobacteriota bacterium


organism_name: Thiohalophilaceae bacterium


organism_name: Kiloniellales bacterium


organism_name: Halobacteriovorax sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Alcanivoracaceae bacterium


organism_name: Thermohalobaculum sp.


organism_name: Longimicrobiales bacterium


organism_name: Burkholderiales bacterium


organism_name: Desulfopila sp.


organism_name: Candidatus Limnocylindria bacterium


organism_name: Hyphomicrobiales bacterium


organism_name: Staphylococcus aureus


organism_name: Lysobacterales bacterium


organism_name: Pelagibius sp.


organism_name: Anaerolineales bacterium


organism_name: Candidatus Palauibacteraceae bacterium


organism_name: Sneathiella sp.


organism_name: Parasphingorhabdus sp.


organism_name: Gemmatimonadales bacterium


organism_name: Thalassolituus sp.


organism_name: Opitutaceae bacterium


organism_name: Polyangiaceae bacterium


organism_name: Zhongshania antarctica


organism_name: Woeseiaceae bacterium


organism_name: Candidatus Eutrophocola sp.


organism_name: Verrucomicrobiia bacterium


organism_name: Limisphaerales bacterium


organism_name: Alcanivoracaceae bacterium


organism_name: Chitinophagales bacterium


organism_name: Zhongshania sp.


organism_name: Bacillus arachidis


organism_name: Anaerolineales bacterium


organism_name: Brevibacillus thermoruber


organism_name: Streptomyces sp. 17_S59


excluded_from_refseq: unverified source organism; genus undefined

organism_name: bacterium 16_S56


organism_name: Streptomyces sp. 13_S37


organism_name: Caballeronia sp. 11_S32


organism_name: Burkholderia sp. 10_S31


organism_name: Bacillus cereus


organism_name: bacterium 06_S16


organism_name: Cupriavidus sp. 09_S30


asm_submitter: SRCAMB

infraspecific_name: strain=SCPM-O-B-19274 (M17K)

organism_name: Klebsiella pneumoniae


infraspecific_name: strain=SCPM-O-B-19195 (P16K)


infraspecific_name: strain=SCPM-O-B-19188 (T10K)


organism_name: Proteus mirabilis


organism_name: Acinetobacter baumannii


organism_name: Escherichia coli


asm_submitter: Huaibei normal university

organism_name: Acinetobacter sp. B-6


organism_name: Gallionella sp.


organism_name: Candidatus Villigracilaceae bacterium


organism_name: Paracoccaceae bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Quisquiliibacterium sp.


organism_name: Longimicrobiales bacterium


organism_name: Kiloniellales bacterium


organism_name: Burkholderiaceae bacterium


organism_name: Gemmatimonadales bacterium


organism_name: Candidatus Multivoradales bacterium


organism_name: Candidatus Rariloculaceae bacterium


organism_name: Woeseiaceae bacterium


organism_name: Thalassolituus sp.


organism_name: Gemmatimonadota bacterium


organism_name: Thermohalobaculum sp.


organism_name: Lysobacterales bacterium


organism_name: Boseongicola sp.


organism_name: Alcanivoracaceae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Acidobacteriota bacterium


organism_name: Syntrophobacteria bacterium


organism_name: Zhongshania sp.


organism_name: Candidatus Palauibacteraceae bacterium


organism_name: Anaerolineales bacterium


organism_name: Candidatus Eutrophocola sp.


organism_name: Candidatus Limnocylindrales bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Thermoleophilia bacterium


organism_name: Polyangiales bacterium


organism_name: Nitrospira sp.


organism_name: Candidatus Villigracilaceae bacterium


organism_name: Candidatus Nitrosomaritimum sp.


organism_name: Steroidobacteraceae bacterium


organism_name: Desulfobulbales bacterium


organism_name: Sulfuricurvum kujiense


organism_name: Gemmatimonadales bacterium


organism_name: Candidatus Defluviilinea sp.


organism_name: Bacteroidales bacterium


asm_submitter: Shandong University

organism_name: Sphingomonas sp. jy18


organism_name: Burkholderiaceae bacterium


organism_name: Perlucidibaca sp.


organism_name: Crocinitomicaceae bacterium


organism_name: Woeseiaceae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Quisquiliibacterium sp.


organism_name: Thiohalophilaceae bacterium


organism_name: Ignavibacteriaceae bacterium


organism_name: Thalassolituus sp.


organism_name: Halobacteriovorax sp.


organism_name: Deferrisomatales bacterium


organism_name: Nitrospiraceae bacterium


organism_name: Thermoanaerobaculia bacterium


organism_name: Tenderiaceae bacterium (SeqCode)


organism_name: Pseudomonas sp.


organism_name: Thermodesulfovibrionales bacterium


organism_name: Candidatus Microgenomatia bacterium


organism_name: Candidatus Krumholzibacteriia bacterium


organism_name: Chitinophagaceae bacterium


organism_name: Perlucidibaca sp.


organism_name: Thermodesulfovibrionia bacterium


organism_name: Bacteroidota bacterium


organism_name: Polyangia bacterium


organism_name: Candidatus Limnocylindrales bacterium


organism_name: Gemmatimonadales bacterium


organism_name: Gemmatimonadaceae bacterium


organism_name: Ilumatobacter sp.


organism_name: Candidatus Opimibacter sp.


organism_name: Saprospiraceae bacterium


organism_name: Candidatus Aminicenantales bacterium


organism_name: Opitutaceae bacterium


organism_name: Acidobacteriota bacterium


organism_name: Thermoanaerobaculia bacterium


organism_name: Anaerolineales bacterium


organism_name: Candidatus Bathyarchaeia archaeon


organism_name: Ignavibacteriaceae bacterium


organism_name: Vicinamibacterales bacterium


organism_name: Nitrospiraceae bacterium


organism_name: Gemmatimonadota bacterium


organism_name: Limisphaerales bacterium


organism_name: Candidatus Limnocylindrales bacterium


organism_name: Bacteroidota bacterium


organism_name: Gemmatimonadaceae bacterium


organism_name: Binatia bacterium (SeqCode)


organism_name: Ilumatobacter sp.


organism_name: Polyangiaceae bacterium


organism_name: Steroidobacteraceae bacterium


organism_name: Thermomicrobiaceae bacterium


organism_name: Acidimicrobiales bacterium


organism_name: Longimicrobiales bacterium


asm_submitter: Yangzhou University

organism_name: Stutzerimonas nitrititolerans


organism_name: Polyangiales bacterium


asm_submitter: Alagappa University, Karaikudi, Tamilnadu, India & Eminent Biosciences,Indore, Madhya Pradesh, India

organism_name: Staphylococcus warneri


asm_submitter: Northeast Agricultural University

organism_name: Streptomyces albidoflavus


asm_submitter: BIDHANNAGAR COLLEGE

organism_name: Enterobacter ludwigii


organism_name: Kosakonia cowanii


asm_submitter: Ulsan college

organism_name: Stutzerimonas degradans


asm_submitter: Keimyung University

organism_name: Aurantiacibacter sp. KMU-128


asm_submitter: University of Copenhagen

excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Komagataeibacter saccharivorans


asm_submitter: KU - University of Copenhagen

organism_name: Pseudomonas sp. JL27(2026)


asm_submitter: Iowa State University

organism_name: Ligilactobacillus salivarius


organism_name: Pseudomonas sp. JL23


asm_submitter: Keio University Hospital

organism_name: Bacteroides hominis


organism_name: Bacteroides thetaiotaomicron


excluded_from_refseq: fragmented assembly

organism_name: Bacteroides ovatus


organism_name: Phocaeicola dorei


asm_submitter: Zhejiang University School of Medicine

organism_name: Pseudomonas aeruginosa


organism_name: Klebsiella quasipneumoniae


organism_name: Enterobacter hormaechei


organism_name: Acinetobacter nosocomialis


organism_name: Klebsiella michiganensis


organism_name: Klebsiella pneumoniae


organism_name: Acinetobacter soli


organism_name: Escherichia coli


asm_submitter: NCTR/FDA

organism_name: Vibrio parahaemolyticus


asm_submitter: Shandong University of Science and Technology


asm_submitter: Chung-Ang university

organism_name: Glutamicibacter sp. BS14


asm_submitter: C.N.R. - Institute for Biological Resources and Marine Biotechnology (IRBIM)

organism_name: Haloarcula sp. H-hyl2


organism_name: Glutamicibacter sp. MOO4


asm_submitter: TecNM/ Instituto Tecnologico de Veracruz. UNIDA

organism_name: Pediococcus acidilactici


organism_name: Haloarcula sp. H-hyl6


asm_submitter: Universite de Bordeaux

organism_name: Metamycoplasma hominis


asm_submitter: Zhejiang A&F university

organism_name: Clostridium perfringens


asm_submitter: Academician I.N.Blokhina Nizhny Novgorod Scientific Research Institute of Epidemiology and Microbiol

organism_name: Staphylococcus aureus


infraspecific_name: strain=CJB-DD


infraspecific_name: strain=CFX


asm_submitter: Velleja Research

organism_name: Bifidobacterium bifidum


excluded_from_refseq: annotation fails completeness check


asm_submitter: Hungarian University of Agriculture and Life Sciences

organism_name: Rhodococcus pyridinivorans


asm_submitter: Hunan Agricultural University

organism_name: Parabacteroides distasonis


asm_submitter: The Medical City


organism_name: Enterobacter hormaechei


organism_name: Citrobacter freundii


organism_name: Acinetobacter baumannii


asm_submitter: Virginia tech

organism_name: Xylella fastidiosa subsp. multiplex


asm_submitter: Laboratory of Molecular Bioengineering

organism_name: Agrobacterium tomkonis


asm_submitter: Zhejiang University

organism_name: Burkholderiales bacterium


organism_name: Chitinophagaceae bacterium


organism_name: Pseudolabrys sp.


organism_name: Candidatus Azotimanducaceae bacterium


organism_name: Sphingomicrobium sp.


organism_name: Aquirhabdus sp.


organism_name: Burkholderiaceae bacterium


organism_name: Bacteroidota bacterium


organism_name: Candidatus Tumulicola sp.


organism_name: Rhodanobacteraceae bacterium


organism_name: Rugosimonospora sp.


organism_name: Thermodesulfovibrionales bacterium


organism_name: Anaeromyxobacter sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Candidatus Korobacteraceae bacterium


organism_name: Occallatibacter sp.


organism_name: Eximiradiia bacterium


organism_name: Gemmatimonadales bacterium


organism_name: Candidatus Defluviilinea sp.


organism_name: Gallionellaceae bacterium


organism_name: Terriglobales bacterium


organism_name: Terriglobia bacterium


organism_name: Binataceae bacterium (SeqCode)


organism_name: Candidatus Dormibacteraceae bacterium


organism_name: Pseudolabrys sp.


organism_name: Bacteroidota bacterium


organism_name: Anaerolineaceae bacterium


organism_name: Minisyncoccia bacterium


organism_name: Candidatus Limnocylindria bacterium


organism_name: Steroidobacteraceae bacterium


organism_name: Thermoanaerobaculia bacterium


organism_name: Dongiaceae bacterium


organism_name: Ignavibacteria bacterium


organism_name: Chroococcales cyanobacterium


organism_name: Candidatus Eiseniibacteriota bacterium


organism_name: Polyangiales bacterium


organism_name: Candidatus Angelobacter sp.


organism_name: Caulobacteraceae bacterium


organism_name: Usitatibacter sp.


organism_name: Syntrophales bacterium


organism_name: Aggregatilineales bacterium


organism_name: Bacteroidia bacterium


organism_name: Nitrososphaera sp.


organism_name: Limisphaerales bacterium


organism_name: Candidatus Microgenomatia bacterium


organism_name: Gemmobacter aquatilis


organism_name: Methanomicrobiales archaeon


organism_name: Nitrospira sp.


organism_name: Burkholderiaceae bacterium


organism_name: Binatia bacterium (SeqCode)


organism_name: Thermodesulfovibrionia bacterium


organism_name: bacterium


organism_name: Rubrivivax sp.


organism_name: Candidatus Aminicenantales bacterium


organism_name: Thermodesulfovibrionales bacterium


organism_name: Thermodesulfobacteriota bacterium


organism_name: Candidatus Omnitrophota bacterium


organism_name: Candidatus Bathyarchaeales archaeon


organism_name: Desulfomonilia bacterium


organism_name: Patescibacteria group bacterium


organism_name: Candidatus Thorarchaeaceae archaeon


organism_name: Thermoanaerobaculaceae bacterium


organism_name: Syntrophobacteria bacterium


organism_name: Thermoplasmata archaeon


organism_name: Methanomassiliicoccales archaeon


organism_name: Methanospirillaceae archaeon


organism_name: Thermoplasmatota archaeon


organism_name: Myxococcota bacterium


organism_name: Actinomycetota bacterium


organism_name: Syntrophobacterales bacterium


organism_name: Candidatus Altarchaeia archaeon


organism_name: Geoanaerobacter sp.


organism_name: Candidatus Azotimanducaceae bacterium


organism_name: Candidatus Methanofastidiosia archaeon


organism_name: Deferrisomatales bacterium


organism_name: Thermodesulfovibrionales bacterium


organism_name: Bacteroidales bacterium


organism_name: Thiobacillaceae bacterium


organism_name: Candidatus Aminicenantales bacterium


organism_name: Methanomicrobiales archaeon


organism_name: Gemmatimonadales bacterium


organism_name: Candidatus Bathyarchaeales archaeon


organism_name: Nitrospira sp.


organism_name: Thermoplasmatota archaeon


organism_name: Thermodesulfovibrionia bacterium


organism_name: Phycisphaerae bacterium


organism_name: Gallionellaceae bacterium


organism_name: Thermoanaerobaculaceae bacterium


organism_name: Spirochaetota bacterium


organism_name: Candidatus Omnitrophota bacterium


organism_name: Thermoplasmata archaeon


organism_name: bacterium


organism_name: Myxococcota bacterium


organism_name: Thermodesulfovibrionales bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Syntrophales bacterium


organism_name: Candidatus Bathycorpusculaceae archaeon


organism_name: Methanospirillaceae archaeon


organism_name: Bacteroidales bacterium


organism_name: Candidatus Thorarchaeaceae archaeon


organism_name: Thermodesulfobacteriota bacterium


organism_name: Desulfomonilia bacterium


organism_name: Candidatus Aminicenantales bacterium


organism_name: Rubrivivax sp.


organism_name: Patescibacteria group bacterium


organism_name: Thermoplasmatota archaeon


organism_name: Burkholderiales bacterium


organism_name: Syntrophobacteria bacterium


organism_name: Thiobacillaceae bacterium


organism_name: Candidatus Bathyarchaeales archaeon


organism_name: Thermodesulfovibrionales bacterium


organism_name: Candidatus Omnitrophota bacterium


asm_submitter: National Center for Biotechnology Information

organism_name: Staphylococcus aureus


organism_name: Thermoplasmata archaeon


organism_name: Candidatus Azotimanducaceae bacterium


organism_name: Thermoanaerobaculaceae bacterium


organism_name: Candidatus Altarchaeia archaeon


organism_name: Thermodesulfobacteriota bacterium


organism_name: Methanospirillaceae archaeon


organism_name: Phycisphaerae bacterium


organism_name: Methanomicrobiales archaeon


organism_name: bacterium


organism_name: Nitrospira sp.


organism_name: Syntrophales bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Thermodesulfovibrionia bacterium


asm_submitter: Public Health England

organism_name: Campylobacter jejuni


organism_name: Desulfobacterales bacterium


asm_submitter: Health Protection Agency

organism_name: Shigella flexneri


organism_name: Saccharimonadales bacterium (SeqCode)


organism_name: Gemmatimonadales bacterium


organism_name: Candidatus Eiseniibacteriota bacterium


organism_name: Staphylococcus aureus


organism_name: Patescibacteria group bacterium


organism_name: Candidatus Krumholzibacteriia bacterium


organism_name: Candidatus Palauibacteraceae bacterium


organism_name: Woeseiaceae bacterium


organism_name: Planctomycetaceae bacterium


organism_name: Zavarzinia sp.


organism_name: Vicinamibacteria bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Peredibacter sp.


organism_name: Burkholderiales bacterium


organism_name: Candidatus Limnocylindrales bacterium


organism_name: Candidatus Limnocylindria bacterium


organism_name: Acidimicrobiales bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Thermoplasmatota archaeon


organism_name: Lysobacterales bacterium


organism_name: Staphylococcus aureus


organism_name: Cyclobacteriaceae bacterium


organism_name: Nitrospirota bacterium


organism_name: Candidatus Saccharimonadia bacterium


organism_name: Minisyncoccia bacterium


organism_name: Candidatus Methylomirabilia bacterium


organism_name: Egibacteraceae bacterium


organism_name: Campylobacter jejuni


organism_name: Candidatus Rariloculaceae bacterium


organism_name: Candidatus Electryoneota bacterium


organism_name: Listeria monocytogenes


organism_name: Binatia bacterium (SeqCode)


organism_name: Campylobacter coli


organism_name: Candidatus Opimibacter sp.


organism_name: Polyangiaceae bacterium


organism_name: Actinomycetota bacterium


organism_name: Micropepsaceae bacterium


organism_name: Staphylococcus aureus


organism_name: Anaerolineae bacterium


organism_name: Kiloniellales bacterium


organism_name: Thermoplasmatota archaeon


organism_name: Methylomirabilales bacterium (SeqCode)


organism_name: Alphaproteobacteria bacterium


organism_name: Niastella sp.


organism_name: Nitrososphaeraceae archaeon


organism_name: Maricaulaceae bacterium


organism_name: Candidatus Limnocylindrales bacterium


organism_name: Burkholderiales bacterium


organism_name: Candidatus Methylomirabilia bacterium


organism_name: Sphingomicrobium sp.


organism_name: Shigella sonnei


organism_name: Lysobacterales bacterium


organism_name: Candidatus Palauibacteraceae bacterium


organism_name: Pyrinomonadaceae bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Staphylococcus aureus


organism_name: Candidatus Moraniibacteriota bacterium


organism_name: Limnobacter sp.


organism_name: Nitrosarchaeum sp.


organism_name: Gemmatimonadales bacterium


organism_name: Candidatus Limnocylindria bacterium


organism_name: Rhizobiaceae bacterium


organism_name: Thermoplasmatota archaeon


organism_name: Candidatus Opimibacter sp.


organism_name: Shiella sp.


organism_name: Candidatus Acidiferrales bacterium


organism_name: Saccharimonadales bacterium (SeqCode)


organism_name: Nitrospiraceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Cyclobacteriaceae bacterium


organism_name: Egibacteraceae bacterium


organism_name: Candidatus Defluviilinea sp.


organism_name: Staphylococcus aureus


organism_name: Nitrospira sp.


organism_name: Panacagrimonas sp.


organism_name: Lysobacterales bacterium


organism_name: Methylomirabilales bacterium (SeqCode)


organism_name: Thiohalomonadaceae bacterium


organism_name: Planctomycetaceae bacterium


organism_name: Patescibacteria group bacterium


organism_name: Actinomycetota bacterium


organism_name: Candidatus Microgenomatia bacterium


organism_name: Acidimicrobiales bacterium


organism_name: Burkholderiales bacterium


organism_name: Saccharimonadales bacterium (SeqCode)


organism_name: Binatia bacterium (SeqCode)


organism_name: Gemmatimonadales bacterium


organism_name: Phototrophicaceae bacterium


organism_name: Cyclobacteriaceae bacterium


organism_name: Staphylococcus aureus


organism_name: Candidatus Palauibacteraceae bacterium


organism_name: Candidatus Nitrosotenuis sp.


organism_name: Nitrosarchaeum sp.


organism_name: Bacteroidia bacterium


organism_name: Acidobacteriota bacterium


organism_name: Pirellulaceae bacterium


organism_name: Chlamydiales bacterium


organism_name: Cellvibrionaceae bacterium


organism_name: Acidiferrobacterales bacterium


organism_name: Thermoplasmata archaeon


organism_name: Candidatus Rariloculaceae bacterium


organism_name: Candidatus Microgenomatia bacterium


organism_name: Aquicella sp.


organism_name: Actinomycetota bacterium


organism_name: Planctomycetia bacterium


organism_name: Lysobacterales bacterium


organism_name: Staphylococcus aureus


organism_name: Elusimicrobiota bacterium


organism_name: Nitrospiria bacterium


organism_name: Polyangiales bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Ignavibacteriaceae bacterium


organism_name: Minisyncoccia bacterium


organism_name: Gemmatimonadales bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Flagellimonas taeanensis


organism_name: Nitrospira sp.


organism_name: Longimicrobiales bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Nitrospinaceae bacterium


organism_name: Egibacteraceae bacterium


organism_name: Phycisphaerae bacterium


organism_name: Thermohalobaculum sp.


excluded_from_refseq: from large multi-isolate project

organism_name: Staphylococcus aureus


organism_name: Candidatus Multivoradales bacterium


organism_name: Pyrinomonadaceae bacterium


organism_name: Thermoplasmatota archaeon


organism_name: Pseudomonadales bacterium


organism_name: Vicinamibacteria bacterium


organism_name: Nevskiaceae bacterium


organism_name: Anaerolineales bacterium


organism_name: Nevskiales bacterium


organism_name: Blastocatellia bacterium


asm_submitter: Hangzhou Medical College

organism_name: Streptococcus pneumoniae


asm_submitter: Murmansk Arctic University

organism_name: Pseudomonas alloputida


organism_name: Mycolicibacterium chlorophenolicum


organism_name: Rhodococcus sp. MurmanLake-1


annotation_name: Annotation submitted by University of Hohenheim

annotation_provider: University of Hohenheim

asm_submitter: University of Hohenheim

organism_name: Candidatus Phytoplasma phoenicium

refseq_category: reference genome


asm_submitter: The Vavilov Institute of General Genetics

organism_name: Bifidobacterium longum


organism_name: Vicinamibacterales bacterium


organism_name: Rhizobiaceae bacterium


organism_name: Staphylococcus aureus


organism_name: Aequorivita sp.


organism_name: Binatia bacterium (SeqCode)


organism_name: Chitinophagaceae bacterium


organism_name: Dongiaceae bacterium


organism_name: Thermoplasmatota archaeon


organism_name: Methylomirabilales bacterium (SeqCode)


organism_name: Nitrososphaera sp.


organism_name: Minisyncoccia bacterium


organism_name: Anaerolineales bacterium


organism_name: Bacteroidia bacterium


organism_name: Candidatus Microgenomatia bacterium


organism_name: Methanomassiliicoccales archaeon


organism_name: Burkholderiaceae bacterium


organism_name: Victivallales bacterium


organism_name: Aquabacterium sp.


organism_name: Nitrosomonas sp.


organism_name: Candidatus Bathyarchaeia archaeon


organism_name: Anaerohalosphaeraceae bacterium


organism_name: Staphylococcus aureus


organism_name: Thermoplasmata archaeon


organism_name: Nanobdellia archaeon


organism_name: Syntrophales bacterium


organism_name: Patescibacteria group bacterium


organism_name: Nitrosomonadaceae bacterium


organism_name: Bacteroidota bacterium


organism_name: Lysobacterales bacterium


organism_name: Thermodesulfovibrionales bacterium


organism_name: Moraxellaceae bacterium


organism_name: Ilumatobacteraceae bacterium


organism_name: Anaeromyxobacteraceae bacterium


organism_name: Thermoanaerobaculia bacterium


organism_name: Candidatus Altarchaeia archaeon


organism_name: Candidatus Omnitrophota bacterium


organism_name: Methanothrix sp.


organism_name: Bacteroidales bacterium


organism_name: Thermodesulfobacteriota bacterium


organism_name: Staphylococcus aureus


organism_name: Bacteroidia bacterium


organism_name: Thermoanaerobaculaceae bacterium


organism_name: Sulfuritalea sp.


organism_name: Limisphaerales bacterium


organism_name: Gemmatimonadales bacterium


organism_name: Desulfuromonadales bacterium


organism_name: Burkholderiales bacterium


organism_name: Minisyncoccia bacterium


organism_name: Aurantibacillus sp.


organism_name: Nitrosomonadaceae bacterium


organism_name: Kapaibacteriaceae bacterium (SeqCode)


organism_name: Methanomicrobiales archaeon


organism_name: Pseudomonadales bacterium


organism_name: Candidatus Bathyarchaeia archaeon


asm_submitter: CDC

organism_name: Escherichia coli


organism_name: Anaeromyxobacteraceae bacterium


organism_name: Lysobacterales bacterium


organism_name: Anaerohalosphaeraceae bacterium


organism_name: Pasteurella multocida


organism_name: Methanomassiliicoccales archaeon


organism_name: Aquabacterium sp.


organism_name: Candidatus Altarchaeia archaeon


organism_name: Bacteroidia bacterium


organism_name: Bacteroidota bacterium


organism_name: Moraxellaceae bacterium


organism_name: Gemmatimonadales bacterium


organism_name: Thermodesulfobacteriota bacterium


organism_name: Thermodesulfovibrionia bacterium


organism_name: Thermoplasmatota archaeon


organism_name: Sulfuritalea sp.


organism_name: Thermoplasmata archaeon


organism_name: Desulfuromonadales bacterium


organism_name: Methylophilaceae bacterium


organism_name: Nitrosomonas sp.


organism_name: Syntrophales bacterium


organism_name: Pasteurella multocida


organism_name: Crocinitomicaceae bacterium


organism_name: Candidatus Omnitrophota bacterium


organism_name: Burkholderiaceae bacterium


organism_name: Bacteroidia bacterium


organism_name: Candidatus Altarchaeia archaeon


organism_name: Bacteroidales bacterium


organism_name: Burkholderiales bacterium


organism_name: Agitococcus sp.


organism_name: Moraxellaceae bacterium


organism_name: Dehalococcoidales bacterium


organism_name: Limisphaerales bacterium


organism_name: Aquirhabdus sp.


organism_name: Aurantibacillus sp.


organism_name: Minisyncoccia bacterium


organism_name: Thermodesulfobacteriota bacterium


organism_name: Vicingus sp.


organism_name: Pasteurella multocida


annotation_name: Annotation submitted by Kaust

annotation_provider: Kaust

asm_submitter: Kaust

organism_name: Promicromonospora noduliphila


organism_name: Candidatus Omnitrophota bacterium


asm_submitter: Yunnan University

isolate: hypha

organism_name: Bacillus altitudinis


asm_submitter: Qingdao University

organism_name: Shigella sonnei


organism_name: Bacillus velezensis


organism_name: Streptococcus pyogenes


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Escherichia coli


organism_name: Acinetobacter baumannii


organism_name: Shigella flexneri


asm_submitter: FDA/CFSAN

organism_name: Listeria monocytogenes


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Campylobacter jejuni


organism_name: Yersinia enterocolitica


organism_name: Vibrio parahaemolyticus


organism_name: Vibrio diabolicus


organism_name: Vibrio cholerae


excluded_from_refseq: contaminated


organism_name: Klebsiella pneumoniae


organism_name: Staphylococcus aureus


organism_name: Shigella dysenteriae


organism_name: Shigella boydii


organism_name: Shigella sonnei


organism_name: Shigella sp. 2020C_3164_S1


asm_submitter: Centers for Disease Control and Prevention


organism_name: Proteus mirabilis


asm_submitter: Sri Balaji Vidyapeeth

organism_name: Escherichia coli


asm_submitter: Henan Medical University

organism_name: Agarivorans sp. D1326


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention


asm_submitter: MNS-University of Agriculture

organism_name: Bacillus safensis


asm_submitter: The University of Hong Kong

organism_name: Alloprevotella sp.


organism_name: Bacteroides thetaiotaomicron


asm_submitter: National Center for Biotechnology Information

organism_name: Legionella anisa


organism_name: Legionella pneumophila


organism_name: Barnesiella intestinihominis


organism_name: Feifaniaceae bacterium


organism_name: Hominicoprocola sp.


organism_name: Alistipes finegoldii


organism_name: Mediterraneibacter torques


organism_name: Acutalibacteraceae bacterium


organism_name: Vescimonas fastidiosa


organism_name: Faecalibacterium longum


organism_name: Segatella copri


organism_name: Alistipes putredinis


organism_name: Agathobacter rectalis


organism_name: Ruminococcus callidus


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Oscillospiraceae bacterium


organism_name: Escherichia coli


organism_name: Bacteroides fragilis


organism_name: Bifidobacterium adolescentis


organism_name: Roseburia intestinalis


organism_name: Bacteroides uniformis


organism_name: Akkermansia muciniphila


organism_name: Vescimonas sp.


organism_name: Bifidobacterium longum


organism_name: Ruthenibacterium sp.


organism_name: Faecousia sp.


organism_name: Alistipes shahii


organism_name: Gemmiger qucibialis


organism_name: Candidatus Fimivicinus sp.


organism_name: Legionella pneumophila


organism_name: Coprococcus sp.


organism_name: Klebsiella variicola


organism_name: Alistipes onderdonkii


organism_name: Succiniclasticum sp.


organism_name: Pseudocoprococcus catus


organism_name: Barnesiella intestinihominis


organism_name: Mediterraneibacter torques


organism_name: Waltera sp.


organism_name: Jutongia sp.


organism_name: Methanobrevibacter sp.


organism_name: Gemmiger formicilis


organism_name: Prevotella sp.


organism_name: Faecalibacterium duncaniae


organism_name: Oscillospiraceae bacterium


organism_name: Anaerotignum faecicola


organism_name: Gemmiger qucibialis


organism_name: Phascolarctobacterium faecium


organism_name: Candidatus Limisoma sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Parabacteroides merdae


organism_name: Dakarella massiliensis


organism_name: Bilophila wadsworthia


organism_name: Agathobacter rectalis


organism_name: Bacteroides ovatus


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Lachnospiraceae bacterium


organism_name: Bacteroides thetaiotaomicron


organism_name: Legionella pneumophila


organism_name: Candidatus Scatocola faecigallinarum


organism_name: Alphaproteobacteria bacterium


organism_name: Faecalibacterium prausnitzii


organism_name: Odoribacter splanchnicus


organism_name: Phocaeicola vulgatus


organism_name: Alistipes onderdonkii


organism_name: Gemmiger qucibialis


organism_name: Enterocloster sp.


organism_name: Alistipes shahii


organism_name: Dialister invisus


organism_name: Coprobacter fastidiosus


organism_name: Parabacteroides merdae


organism_name: Alistipes putredinis


organism_name: Parabacteroides distasonis


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: [Lactobacillus] rogosae


organism_name: Bacteroides uniformis


organism_name: Oscillospiraceae bacterium


organism_name: Anaerotignum sp.


organism_name: Gemmiger formicilis


organism_name: Clostridium fessum


organism_name: Odoribacter splanchnicus


organism_name: Alistipes dispar


organism_name: Collinsella sp.


organism_name: Phascolarctobacterium faecium


organism_name: Bilophila wadsworthia


organism_name: Bacteroides stercoris


organism_name: Agathobaculum hominis


organism_name: Segatella copri


organism_name: Bacteroides ovatus


organism_name: Dorea phocaeensis


organism_name: Enterocloster sp.


organism_name: Roseburia faecis


organism_name: Dialister invisus


organism_name: Pilosibacter fragilis


organism_name: Gemmiger qucibialis


organism_name: Enterocloster clostridioformis


organism_name: Bifidobacterium hominis


organism_name: Anaerotignum faecicola


organism_name: Bacteroides uniformis


organism_name: Mediterraneibacter gnavus


organism_name: Flavonifractor plautii


organism_name: Escherichia coli


organism_name: Phocaeicola vulgatus


organism_name: Parabacteroides distasonis


organism_name: Candidatus Limisoma sp.


organism_name: Ruminococcus sp.


organism_name: Akkermansia muciniphila


organism_name: Phocaeicola plebeius


organism_name: Alistipes putredinis


organism_name: Bilophila wadsworthia


organism_name: Phocaeicola massiliensis


organism_name: Paraprevotella clara


organism_name: Clostridium fessum


organism_name: Enterocloster sp.


organism_name: Alistipes finegoldii


organism_name: Oscillospiraceae bacterium


organism_name: Bacteroides uniformis


organism_name: Alistipes onderdonkii


organism_name: Anaerotignum faecicola


organism_name: Butyricimonas paravirosa


organism_name: Hominisplanchenecus faecis


organism_name: Hominicoprocola fusiformis


organism_name: Parasutterella excrementihominis


organism_name: Bifidobacterium longum


organism_name: Gemmiger qucibialis


organism_name: Collinsella sp.


organism_name: Odoribacter splanchnicus


organism_name: Candidatus Fimenecus sp.


organism_name: Dysosmobacter welbionis


organism_name: Mediterraneibacter torques


organism_name: Lachnospiraceae bacterium


organism_name: Phascolarctobacterium faecium


organism_name: Lachnospira sp.


organism_name: Bacteroides fragilis


organism_name: Bacteroides clarus


organism_name: Escherichia coli


organism_name: Bacteroides ovatus


organism_name: Barnesiella intestinihominis


organism_name: Gemmiger sp.


organism_name: Fusicatenibacter saccharivorans


organism_name: Alistipes putredinis


organism_name: Faecalibacterium sp.


organism_name: Bacteroidaceae bacterium


organism_name: Flavonifractor plautii


organism_name: Parabacteroides merdae


organism_name: Bacteroides caccae


organism_name: Vescimonas sp.


organism_name: Parabacteroides distasonis


organism_name: Faecalibacterium butyricigenerans


organism_name: Alistipes shahii


organism_name: [Eubacterium] siraeum


organism_name: Coprococcus aceti


organism_name: Hominilimicola fabiformis


organism_name: Parabacteroides johnsonii


organism_name: Ruminococcoides intestinale


organism_name: Butyricimonas virosa


organism_name: Candidatus Alistipes avistercoris


organism_name: Phascolarctobacterium faecium


organism_name: Gemmiger formicilis


organism_name: Agathobacter rectalis


organism_name: Bacteroides stercoris


organism_name: Bacteroidaceae bacterium


organism_name: Alistipes communis


organism_name: Gemmiger qucibialis


organism_name: Aristaeellaceae bacterium


organism_name: Gemmiger sp.


organism_name: Parasutterella excrementihominis


organism_name: Roseburia inulinivorans


organism_name: Odoribacter splanchnicus


organism_name: Waltera acetigignens


organism_name: Jutongia sp.


organism_name: Clostridia bacterium


organism_name: Lachnospira eligens


organism_name: Parabacteroides distasonis


organism_name: Eubacterium sp.


organism_name: Vescimonas sp.


organism_name: Candidatus Fimenecus sp.


organism_name: Bacteroides uniformis


organism_name: Phocaeicola vulgatus


organism_name: Coprococcus ammoniilyticus


organism_name: Roseburia faecis


organism_name: Alistipes shahii


organism_name: Alistipes putredinis


organism_name: Candidatus Merdimorpha sp.


organism_name: Xylanibacter rarus


organism_name: Alistipes finegoldii


organism_name: Brotocaccenecus cirricatena


organism_name: Bifidobacterium longum


organism_name: Candidatus Limivicinus sp.


organism_name: Faecalibacterium sp.


organism_name: Agathobacter rectalis


organism_name: Odoribacter splanchnicus


organism_name: Alistipes onderdonkii


organism_name: Akkermansia muciniphila


organism_name: Butyrivibrio sp.


organism_name: Dialister invisus


organism_name: Ruminococcoides intestinale


organism_name: Huintestinicola butyrica


organism_name: Butyribacter sp.


organism_name: Bacteroides uniformis


organism_name: Phocaeicola coprophilus


organism_name: Ruminococcus sp.


organism_name: Alistipes sp.


organism_name: Parabacteroides distasonis


organism_name: Coprococcus aceti


organism_name: Parasutterella excrementihominis


organism_name: Anthropogastromicrobium aceti


organism_name: Oscillospiraceae bacterium


organism_name: Acutalibacteraceae bacterium


organism_name: Roseburia faecis


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Waltera sp.


organism_name: Faecalibacterium hattorii


organism_name: Bilophila wadsworthia


organism_name: Gemmiger qucibialis


organism_name: Roseburia hominis


organism_name: Bacteroides ndongoniae


organism_name: Mediterraneibacter torques


organism_name: Bacteroides caccae


organism_name: Gallintestinimicrobium propionicum


organism_name: Segatella copri


organism_name: Odoribacter splanchnicus


organism_name: Methanobrevibacter smithii


organism_name: Hominenteromicrobium mulieris


organism_name: Faecalibacterium prausnitzii


organism_name: Alistipes communis


organism_name: Acutalibacteraceae bacterium


organism_name: Coprococcus ammoniilyticus


organism_name: Clostridia bacterium


organism_name: Candidatus Woodwardiibium sp.


organism_name: Candidatus Fimenecus sp.


organism_name: Bacteroidaceae bacterium


organism_name: Aristaeellaceae bacterium


organism_name: Butyricimonas paravirosa


organism_name: Vescimonas sp.


organism_name: Alistipes ihumii


organism_name: Hominimerdicola aceti


organism_name: Oscillospiraceae bacterium


organism_name: Desulfovibrio sp.


organism_name: Hominicoprocola sp.


organism_name: Barnesiella intestinihominis


organism_name: Roseburia faecis


organism_name: Alistipes putredinis


organism_name: Lachnospiraceae bacterium


organism_name: Bilophila wadsworthia


organism_name: Christensenellales bacterium


organism_name: Faecalibacterium duncaniae


organism_name: Clostridia bacterium


organism_name: Candidatus Alistipes avistercoris


organism_name: Alphaproteobacteria bacterium


organism_name: Bacteroides uniformis


organism_name: Acutalibacteraceae bacterium


organism_name: Phascolarctobacterium succinatutens


organism_name: Alistipes shahii


organism_name: Oscillospiraceae bacterium


organism_name: Leyella stercorea


organism_name: Candidatus Aphodousia faecalis


organism_name: Negativibacillus massiliensis


organism_name: Angelakisella sp.


organism_name: Waltera acetigignens


organism_name: Ruminococcus intestinalis


organism_name: Jutongia huaianensis


organism_name: Gemmiger qucibialis


organism_name: Faecalibacillus intestinalis


organism_name: Bacteroides caccae


organism_name: Alistipes indistinctus


organism_name: Faecalibacterium taiwanense


organism_name: Hominicoprocola fusiformis


organism_name: Faecousia intestinalis


organism_name: Vescimonas coprocola


organism_name: Hominimerdicola aceti


organism_name: Akkermansia massiliensis


organism_name: Acutalibacteraceae bacterium


organism_name: Candidatus Ventricola sp.


organism_name: Alistipes putredinis


organism_name: Roseburia faecis


organism_name: Oscillospiraceae bacterium


organism_name: Ruminococcoides intestinihominis


organism_name: Barnesiella intestinihominis


organism_name: Alistipes ihumii


organism_name: Succinivibrio sp.


organism_name: Eubacterium ventriosum


organism_name: Bacteroides uniformis


organism_name: Dorea amylophila


organism_name: Faecalibacterium longum


organism_name: Bilophila wadsworthia


organism_name: Parabacteroides distasonis


organism_name: Fusicatenibacter saccharivorans


organism_name: Alistipes onderdonkii


organism_name: Alistipes communis


organism_name: Phocaeicola vulgatus


organism_name: Faecalibacterium duncaniae


organism_name: Alphaproteobacteria bacterium


organism_name: Mediterraneibacter torques


organism_name: Parabacteroides merdae


organism_name: Acutalibacteraceae bacterium


organism_name: Agathobacter rectalis


organism_name: Bifidobacterium adolescentis


organism_name: Alistipes finegoldii


organism_name: Dialister sp.


organism_name: Oscillospiraceae bacterium


organism_name: Faecalibacterium tardum


organism_name: Alistipes dispar


organism_name: Anaerobutyricum hallii


organism_name: Prevotellaceae bacterium


organism_name: Ruminococcus callidus


organism_name: Ligilactobacillus ruminis


organism_name: Jutongia huaianensis


organism_name: Porcipelethomonas ammoniilytica


organism_name: Victivallaceae bacterium


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genome length too small

organism_name: Fusicatenibacter saccharivorans


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Hominilimicola fabiformis


organism_name: Gemmiger qucibialis


organism_name: Mediterraneibacter torques


excluded_from_refseq: derived from metagenome

organism_name: Escherichia coli


organism_name: Gemmiger formicilis


organism_name: Roseburia faecis


organism_name: Culturomica massiliensis


organism_name: Candidatus Scatocola faecigallinarum


organism_name: Hominisplanchenecus faecis


organism_name: Eubacterium sp.


organism_name: Xylanibacter rarus


organism_name: Candidatus Merdimorpha sp.


organism_name: Methanobrevibacter smithii


organism_name: Christensenellales bacterium


organism_name: Dialister succinatiphilus


organism_name: Alphaproteobacteria bacterium


organism_name: Muribaculaceae bacterium


organism_name: Hominicoprocola sp.


organism_name: Ruminococcus intestinalis


organism_name: Anthropogastromicrobium aceti


organism_name: Collinsella sp.


organism_name: Eubacteriales bacterium


organism_name: Candidatus Merdousia gallistercoris


organism_name: Oscillospiraceae bacterium


organism_name: Candidatus Fimenecus sp.


organism_name: [Eubacterium] siraeum


organism_name: Barnesiella intestinihominis


organism_name: Candidatus Mailhella merdigallinarum


organism_name: Acutalibacteraceae bacterium


organism_name: Bacteroides cellulosilyticus


organism_name: Paludihabitans sp.


organism_name: Butyrivibrio sp.


organism_name: Bacteroides uniformis


organism_name: Alistipes sp.


organism_name: Megasphaera elsdenii


organism_name: Coprococcus sp.


organism_name: Alistipes indistinctus


organism_name: [Lactobacillus] rogosae


organism_name: Lachnospira eligens


organism_name: Alistipes onderdonkii


organism_name: Aristaeellaceae bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Victivallis sp.


organism_name: Christensenellales bacterium


organism_name: Bacteroides stercoris


organism_name: Phocaeicola massiliensis


organism_name: Odoribacter splanchnicus


organism_name: Agathobaculum hominis


organism_name: Phocaeicola vulgatus


organism_name: Faecousia sp.


organism_name: Akkermansia muciniphila


organism_name: Parabacteroides goldsteinii


organism_name: Parabacteroides distasonis


organism_name: Candidatus Apopatocola sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Alistipes communis


organism_name: Angelakisella sp.


organism_name: Bacilli bacterium


organism_name: Roseburia inulinivorans


organism_name: Oscillospiraceae bacterium


organism_name: Bilophila wadsworthia


organism_name: Alistipes putredinis


organism_name: Bacteroides ndongoniae


organism_name: Alistipes hominis


organism_name: Desulfovibrio fairfieldensis


organism_name: Vescimonas sp.


organism_name: Parabacteroides merdae


organism_name: Phocaeicola fibrisolvens


organism_name: Victivallales bacterium


organism_name: Cloacibacillus porcorum


organism_name: Segatella copri


organism_name: Bacteroides uniformis


organism_name: Acutalibacteraceae bacterium


organism_name: Odoribacter splanchnicus


organism_name: Hominicoprocola sp.


organism_name: Lachnospira eligens


organism_name: Aristaeellaceae bacterium


organism_name: Roseburia hominis


organism_name: Alloprevotella sp.


organism_name: Bilophila wadsworthia


organism_name: Christensenellales bacterium


organism_name: Eubacterium sp.


organism_name: Gemmiger sp.


organism_name: Paraprevotella xylaniphila


organism_name: Candidatus Merdousia gallistercoris


organism_name: Duodenibacillus sp.


organism_name: Phocaeicola vulgatus


organism_name: Vescimonas sp.


organism_name: Candidatus Cryptobacteroides sp.


organism_name: Akkermansia muciniphila


organism_name: Ruminococcoides intestinale


organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


organism_name: Waltera acetigignens


organism_name: Agathobacter rectalis


organism_name: Phascolarctobacterium faecium


organism_name: Salmonella enterica


organism_name: Paraprevotella clara


organism_name: Hafnia alvei


organism_name: Roseburia amylophila


organism_name: Candidatus Limisoma sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Ruminococcus sp.


organism_name: Suilimivivens sp.


organism_name: Dialister invisus


organism_name: Angelakisella sp.


organism_name: Faecalibacterium sp.


organism_name: Candidatus Apopatocola sp.


organism_name: Monoglobaceae bacterium


organism_name: Eubacteriales bacterium


organism_name: Coprococcus sp.


organism_name: Candidatus Limivicinus sp.


organism_name: Escherichia coli


organism_name: Faecalibacterium tardum


organism_name: Clostridia bacterium


organism_name: Paraprevotella sp.


organism_name: Alistipes onderdonkii


organism_name: Segatella copri


organism_name: Christensenellales bacterium


organism_name: Gemmiger sp.


organism_name: Prevotella sp.


organism_name: [Ruminococcus] lactaris


organism_name: Salmonella enterica


organism_name: Alistipes putredinis


organism_name: Oscillospiraceae bacterium


organism_name: Desulfovibrio sp.


organism_name: Candidatus Fimenecus sp.


organism_name: Aristaeellaceae bacterium


organism_name: Vescimonas sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Roseburia faecis


organism_name: Phocaeicola fibrisolvens


organism_name: Methanobrevibacter smithii


organism_name: Candidatus Limivicinus sp.


organism_name: Faecalibacterium hattorii


organism_name: Alistipes sp.


organism_name: Sutterella wadsworthensis


organism_name: Hominisplanchenecus faecis


organism_name: Paraprevotella clara


organism_name: Bacteroidaceae bacterium


organism_name: Xylanibacter rarus


organism_name: Alphaproteobacteria bacterium


organism_name: Prevotella sp.


organism_name: Roseburia intestinalis


organism_name: Bifidobacterium longum


organism_name: Barnesiella intestinihominis


organism_name: Agathobaculum sp.


organism_name: Desulfovibrio sp.


organism_name: Campylobacter coli


organism_name: Campylobacter fetus


organism_name: Phocaeicola vulgatus


organism_name: Roseburia faecis


organism_name: Campylobacter jejuni


organism_name: Phocaeicola plebeius


organism_name: Escherichia coli


organism_name: Blautia wexlerae


organism_name: Candidatus Caccoplasma intestinavium


organism_name: Providencia stuartii


organism_name: Shigella flexneri


organism_name: Ruminococcoides intestinale


organism_name: Allocoprococcus comes


organism_name: Alistipes putredinis


organism_name: Lachnospira sp.


organism_name: Klebsiella pneumoniae


organism_name: Bacteroides stercoris


organism_name: Acutalibacteraceae bacterium


organism_name: Collinsella sp.


organism_name: Bilophila wadsworthia


organism_name: Butyribacter intestini


organism_name: Agathobacter rectalis


organism_name: Acinetobacter baumannii


organism_name: Escherichia coli


organism_name: Hominilimicola fabiformis


organism_name: Bacteroides sp.


organism_name: Enterobacter hormaechei


organism_name: Holdemanella sp.


organism_name: Gallintestinimicrobium propionicum


organism_name: Odoribacter splanchnicus


organism_name: Parabacteroides merdae


organism_name: Phascolarctobacterium faecium


organism_name: Acidaminococcus intestini


organism_name: Listeria monocytogenes


organism_name: Alistipes senegalensis


organism_name: Clostridium fessum


organism_name: Faecalibacterium prausnitzii


organism_name: Candidatus Avimicrobium caecorum


organism_name: Faecalibacterium duncaniae


organism_name: Sutterella wadsworthensis


organism_name: Bacteroides finegoldii


organism_name: Salmonella enterica


organism_name: Parabacteroides distasonis


organism_name: Escherichia coli


organism_name: Hafnia alvei


organism_name: Bacteroides uniformis


organism_name: Acinetobacter baumannii


organism_name: Klebsiella pneumoniae


organism_name: Campylobacter jejuni


organism_name: Veillonella sp.


organism_name: Mediterraneibacter gnavus


organism_name: Bilophila wadsworthia


organism_name: Listeria monocytogenes


organism_name: Bacteroides ovatus


organism_name: Streptococcus thermophilus


organism_name: Phocaeicola dorei


organism_name: Sutterella wadsworthensis


organism_name: Bacteroides faecis


organism_name: Bacteroides stercoris


organism_name: Faecalibacterium longum


organism_name: Escherichia coli


organism_name: Alistipes putredinis


organism_name: Butyricimonas paravirosa


organism_name: Acutalibacteraceae bacterium


organism_name: Bacteroides uniformis


organism_name: Phascolarctobacterium faecium


organism_name: Parabacteroides distasonis


asm_submitter: USDA FSIS

organism_name: Campylobacter jejuni


organism_name: Alistipes shahii


asm_submitter: FDA Center for Food Safety and Applied Nutrition


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Bilophila wadsworthia


organism_name: Roseburia faecis


organism_name: Salmonella enterica


organism_name: Bacteroides cellulosilyticus


organism_name: Alistipes communis


organism_name: Candidatus Caccoplasma intestinavium


organism_name: Alistipes inops


organism_name: Escherichia coli


organism_name: Streptococcus thermophilus


organism_name: Phocaeicola vulgatus


organism_name: Odoribacter splanchnicus


organism_name: Klebsiella pneumoniae


organism_name: [Ruminococcus] lactaris


organism_name: Sutterella wadsworthensis


organism_name: Vibrio parahaemolyticus


organism_name: Parabacteroides distasonis


organism_name: Alphaproteobacteria bacterium


organism_name: Faecalibacterium sp.


organism_name: Shigella sonnei


organism_name: Ruminococcoides intestinale


organism_name: Acutalibacteraceae bacterium


organism_name: Parabacteroides johnsonii


organism_name: Staphylococcus aureus


organism_name: Vescimonas sp.


organism_name: Catenibacterium mitsuokai


organism_name: Escherichia coli


organism_name: Bacteroides uniformis


organism_name: Alistipes putredinis


organism_name: Morganella morganii


organism_name: Paraprevotella clara


organism_name: Pasteurella multocida


organism_name: Hominicoprocola fusiformis


organism_name: Butyribacter sp.


organism_name: Sutterella wadsworthensis


organism_name: Holdemanella porci


organism_name: Vescimonas coprocola


organism_name: Sodaliphilus sp.


organism_name: Candidatus Limisoma sp.


organism_name: Hominilimicola fabiformis


organism_name: Alistipes finegoldii


organism_name: Roseburia hominis


organism_name: Mediterraneibacter torques


organism_name: Hominimerdicola sp.


organism_name: Bilophila wadsworthia


organism_name: Vescimonas sp.


organism_name: Bacteroides sp.


organism_name: Alistipes onderdonkii


organism_name: Waltera acetigignens


organism_name: Bifidobacterium adolescentis


organism_name: Bacteroides salyersiae


organism_name: Faecalibacterium butyricigenerans


organism_name: Bacteroides faecis


organism_name: Ruminococcus callidus


organism_name: Oscillospiraceae bacterium


organism_name: Gemmiger formicilis


organism_name: Dialister hominis


organism_name: Agathobacter rectalis


organism_name: Alistipes indistinctus


organism_name: Prevotellaceae bacterium


organism_name: Faecalibacterium longum


organism_name: Faecalibacterium duncaniae


organism_name: Alistipes dispar


organism_name: Coprococcus aceti


organism_name: Anaerotignum faecicola


organism_name: Alistipes inops


organism_name: Alistipes onderdonkii


organism_name: Ruminococcoides intestinale


organism_name: Vescimonas coprocola


organism_name: Roseburia faecis


organism_name: Bacteroides uniformis


organism_name: Bacteroides caccae


organism_name: Collinsella sp.


organism_name: Fusicatenibacter saccharivorans


organism_name: Bacteroides thetaiotaomicron


organism_name: Oscillibacter sp.


organism_name: Bifidobacterium adolescentis


organism_name: Dialister invisus


organism_name: Escherichia coli


organism_name: Hominicoprocola sp.


organism_name: Blautia wexlerae


organism_name: Mitsuokella jalaludinii


organism_name: Lachnospiraceae bacterium


organism_name: Clostridium fessum


organism_name: Coprobacillaceae bacterium


organism_name: Monoglobus pectinilyticus


organism_name: Hominilimicola fabiformis


organism_name: Otoolea sp.


organism_name: Bacteroides uniformis


organism_name: [Lactobacillus] rogosae


organism_name: Mediterraneibacter torques


organism_name: Alitiscatomonas aceti


organism_name: Clostridium sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Blautia caecimuris


organism_name: Roseburia faecis


organism_name: Candidatus Oscillibacter avistercoris


organism_name: Collinsella intestinalis


organism_name: Ruthenibacterium lactatiformans


organism_name: Ruminococcoides intestinale


organism_name: Blautia sp.


organism_name: Paraprevotella clara


organism_name: Enterocloster sp.


organism_name: Oscillospiraceae bacterium


organism_name: Butyricimonas virosa


organism_name: [Eubacterium] siraeum


organism_name: Candidatus Scatocola faecigallinarum


organism_name: Victivallales bacterium


organism_name: Alistipes putredinis


organism_name: Odoribacter splanchnicus


organism_name: Parabacteroides hominis


organism_name: Acutalibacteraceae bacterium


organism_name: Faecalitalea cylindroides


organism_name: Phascolarctobacterium faecium


organism_name: Faecousia sp.


organism_name: Bacteroides clarus


organism_name: Candidatus Fimivicinus sp.


organism_name: Candidatus Fimisoma sp.


organism_name: Lepagella sp.


organism_name: Candidatus Ventricola sp.


organism_name: Barnesiella intestinihominis


organism_name: Akkermansia muciniphila


organism_name: Bacteroides uniformis


organism_name: Bilophila wadsworthia


organism_name: Faecousia intestinalis


organism_name: Alistipes communis


organism_name: Oscillospiraceae bacterium


organism_name: Alistipes ihumii


organism_name: Parabacteroides distasonis


organism_name: Phocaeicola massiliensis


organism_name: Blautia wexlerae


organism_name: Mediterraneibacter torques


organism_name: Alistipes dispar


organism_name: Alphaproteobacteria bacterium


organism_name: Ruthenibacterium lactatiformans


organism_name: Vescimonas sp.


organism_name: Bacteroides cellulosilyticus


organism_name: Desulfovibrio porci


organism_name: Prevotella sp.


organism_name: Brotocaccenecus cirricatena


organism_name: Faecalibacterium longum


organism_name: Acinetobacter baumannii


organism_name: Bacteroides stercoris


organism_name: Parabacteroides merdae


organism_name: Hominimerdicola aceti


organism_name: Paraprevotella clara


organism_name: Candidatus Alistipes merdipullorum


organism_name: Candidatus Cryptobacteroides sp.


organism_name: Oscillospiraceae bacterium


organism_name: Agathobacter rectalis


organism_name: Ruminococcoides intestinale


organism_name: Leyella lascolaii


organism_name: Eubacteriales bacterium


organism_name: Odoribacter splanchnicus


organism_name: Ruminiclostridium sp.


excluded_from_refseq: contaminated; annotation fails MAG completeness check; derived from metagenome

organism_name: Caecibacteroides sp.


organism_name: Candidatus Scatocola faecipullorum


organism_name: Phascolarctobacterium succinatutens


organism_name: Jutongia sp.


organism_name: Gemmiger qucibialis


organism_name: Phocaeicola plebeius


organism_name: Phocaeicola sp.


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Waltera sp.


organism_name: Roseburia faecis


organism_name: Akkermansia muciniphila


organism_name: Phocaeicola dorei


organism_name: Parabacteroides distasonis


organism_name: Faecalibacterium duncaniae


organism_name: Prevotella sp.


organism_name: Bacteroides sp.


organism_name: Alistipes putredinis


organism_name: Eshraghiella crossota


organism_name: Acutalibacteraceae bacterium


organism_name: Bacteroides fragilis


organism_name: Brotocaccenecus cirricatena


organism_name: Ruminococcus sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; genome length too small

organism_name: Coprococcus aceti


organism_name: Candidatus Scatosoma sp.


organism_name: Candidatus Merdousia sp.


organism_name: Eubacterium sp.


organism_name: Candidatus Fimenecus sp.


organism_name: Phascolarctobacterium succinatutens


organism_name: Paraprevotella clara


organism_name: Acidaminococcus fermentans


organism_name: Bacteroides uniformis


organism_name: Agathobacter rectalis


organism_name: Alloprevotella sp.


organism_name: Candidatus Scatocola faecigallinarum


organism_name: Megamonas funiformis


organism_name: Prevotella sp.


organism_name: Emergencia sp.


organism_name: Parabacteroides distasonis


organism_name: Megasphaera stantonii


organism_name: Jutongia sp.


organism_name: Acidaminococcus intestini


organism_name: Bacteroides clarus


organism_name: Enterocloster sp.


organism_name: Enterocloster bolteae


organism_name: Sutterella sp.


organism_name: Bilophila sp.


organism_name: Oscillibacter sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Desulfovibrio sp.


organism_name: Victivallales bacterium


organism_name: Candidatus Fimenecus sp.


organism_name: Christensenellaceae bacterium


organism_name: Kiritimatiellia bacterium


organism_name: Vescimonas fastidiosa


organism_name: Prevotella sp.


organism_name: Candidatus Cryptobacteroides sp.


organism_name: Eubacteriales bacterium


organism_name: Alloprevotella sp.


organism_name: Parabacteroides sp.


organism_name: Christensenellales bacterium


organism_name: Bacteroidaceae bacterium


organism_name: [Eubacterium] siraeum


organism_name: Eshraghiella crossota


organism_name: Segatella copri


organism_name: Vescimonas sp.


organism_name: Candidatus Limisoma sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Oligosphaeraceae bacterium


organism_name: Campylobacter sp.


organism_name: Candidatus Methanoprimaticola hominis


organism_name: Prevotella pectinovora


organism_name: Candidatus Avelusimicrobium sp.


organism_name: Candidatus Cryptobacteroides sp.


organism_name: Faecalibacterium sp.


organism_name: Eubacteriales bacterium


organism_name: Megasphaera intestinihominis


organism_name: Aristaeellaceae bacterium


organism_name: Brachyspira aalborgi


organism_name: Prevotella sp.


organism_name: Suilimivivens sp.


organism_name: Duodenibacillus sp.


organism_name: Alistipes senegalensis


organism_name: Bacteroides sp.


organism_name: Candidatus Fimimonas sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Candidatus Apopatosoma sp.


organism_name: Oscillospiraceae bacterium


organism_name: Monoglobaceae bacterium


organism_name: Hominicoprocola fusiformis


organism_name: Candidatus Cryptobacteroides sp.


organism_name: Vescimonas sp.


organism_name: Coprococcus sp.


organism_name: Christensenellales bacterium


organism_name: Succinivibrio sp.


organism_name: Desulfovibrio sp.


organism_name: Prevotella sp.


organism_name: Eubacteriales bacterium


organism_name: Dorea longicatena


organism_name: Christensenellaceae bacterium


organism_name: Alloprevotella sp.


organism_name: Pumilibacteraceae bacterium


organism_name: Victivallales bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Waltera sp.


organism_name: Oscillospiraceae bacterium


organism_name: Angelakisella sp.


organism_name: Candidatus Physcousia sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Clostridia bacterium


organism_name: Eshraghiella crossota


organism_name: Bilophila wadsworthia


organism_name: Desulfovibrio sp.


organism_name: Alistipes finegoldii


organism_name: Candidatus Scatosoma sp.


organism_name: Sutterella wadsworthensis


organism_name: Coprococcus aceti


organism_name: Ruthenibacterium lactatiformans


organism_name: Candidatus Cryptobacteroides sp.


organism_name: Prevotella sp.


organism_name: Succiniclasticum sp.


organism_name: Waltera sp.


organism_name: Hominicoprocola fusiformis


organism_name: Oscillospiraceae bacterium


organism_name: Aristaeellaceae bacterium


organism_name: Gemmiger formicilis


organism_name: Victivallales bacterium


organism_name: Parabacteroides distasonis


organism_name: Ligilactobacillus ruminis


organism_name: Bifidobacterium adolescentis


organism_name: Acutalibacteraceae bacterium


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome

organism_name: Dialister invisus


organism_name: Candidatus Fimenecus sp.


organism_name: Escherichia coli


organism_name: Hominimerdicola aceti


organism_name: Paraprevotella clara


organism_name: Barnesiella intestinihominis


organism_name: Prevotella sp.


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Bacteroides uniformis


organism_name: Coprococcus sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Segatella hominis


organism_name: Oscillospiraceae bacterium


organism_name: Roseburia faecis


organism_name: Angelakisella sp.


organism_name: Parabacteroides merdae


organism_name: Dialister sp.


organism_name: Bacteroidaceae bacterium


organism_name: Hominimerdicola sp.


organism_name: Muribaculaceae bacterium


organism_name: Leyella lascolaii


organism_name: Segatella copri


organism_name: Hallella mizrahii


organism_name: Ruminococcoides intestinale


organism_name: Alistipes putredinis


organism_name: Xylanibacter rarus


organism_name: Candidatus Merdousia gallistercoris


organism_name: Fusicatenibacter sp.


organism_name: Fusicatenibacter saccharivorans


organism_name: Victivallales bacterium


organism_name: Paraprevotella clara


organism_name: Candidatus Spyradocola sp.


organism_name: Eshraghiella crossota


organism_name: Laedolimicola intestinihominis


organism_name: Candidatus Barnesiella merdigallinarum


organism_name: Oscillospiraceae bacterium


organism_name: Hominicoprocola sp.


organism_name: Phocaeicola vulgatus


organism_name: Candidatus Borkfalkia sp.


organism_name: Jutongia sp.


organism_name: Lachnospiraceae bacterium


organism_name: Vescimonas sp.


organism_name: Barnesiella intestinihominis


organism_name: Ruminococcus champanellensis


organism_name: Gemmiger qucibialis


organism_name: Aristaeellaceae bacterium


organism_name: Candidatus Limimorpha avicola


organism_name: Alistipes putredinis


organism_name: Parabacteroides distasonis


organism_name: Eubacteriales bacterium


organism_name: Candidatus Methanoprimaticola sp.


organism_name: Prevotella sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Anaerotardibacter sp.


organism_name: Agathobacter rectalis


organism_name: Coprococcus sp.


organism_name: Faecousia sp.


organism_name: Alloprevotella sp.


organism_name: Candidatus Merdousia sp.


organism_name: Candidatus Limadaptatus sp.


organism_name: Oscillospiraceae bacterium


organism_name: Suilimivivens sp.


organism_name: Christensenellales bacterium


organism_name: Candidatus Fimenecus sp.


organism_name: Phocaeicola sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Eubacterium sp.


organism_name: Odoribacter splanchnicus


organism_name: Akkermansia muciniphila


organism_name: Candidatus Cryptobacteroides sp.


organism_name: Parabacteroides merdae


organism_name: Flavonifractor plautii


organism_name: Alphaproteobacteria bacterium


organism_name: Phocaeicola intestinalis


organism_name: Gemmiger sp.


organism_name: Alistipes onderdonkii


organism_name: Alistipes putredinis


organism_name: Bacteroides uniformis


organism_name: Alloprevotella sp.


organism_name: Acidaminococcus fermentans


organism_name: Phocaeicola vulgatus


organism_name: Candidatus Fimenecus sp.


organism_name: Parabacteroides distasonis


organism_name: Phascolarctobacterium faecium


organism_name: Turicimonas muris


organism_name: Butyricimonas virosa


organism_name: Bacteroides sp.


organism_name: Ruminococcus intestinalis


organism_name: Bacteroides eggerthii


organism_name: Desulfovibrio sp.


organism_name: Xylanibacter sp.


organism_name: Bacteroides ndongoniae


organism_name: Haemophilus parainfluenzae


organism_name: Roseburia amylophila


organism_name: Coprococcus aceti


organism_name: Oscillospiraceae bacterium


organism_name: Alistipes putredinis


organism_name: Hominimerdicola sp.


organism_name: Roseburia faecis


organism_name: Candidatus Limisoma sp.


organism_name: Bacteroides uniformis


organism_name: Ruminococcus sp.


organism_name: Paraprevotella sp.


organism_name: Paraprevotella clara


organism_name: Candidatus Alistipes avistercoris