organism_name: Serratia marcescens


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI

asm_submitter: CDC

assembly_level: Contig

assembly_type: haploid

excluded_from_refseq: from large multi-isolate project

genome_rep: Full

group: bacteria

organism_name: Escherichia coli

release_type: Major

version_status: latest


asm_submitter: National Center for Biotechnology Information

organism_name: Salmonella enterica


organism_name: Streptococcus pyogenes


organism_name: Legionella pneumophila


asm_submitter: FDA

organism_name: Campylobacter jejuni


asm_submitter: The University of Hong Kong

assembly_level: Scaffold

excluded_from_refseq: derived from metagenome

organism_name: Dubosiella muris

paired_asm_comp: identical


organism_name: Candidatus Pelethomonas sp.


organism_name: Desulfovibrio sp.


organism_name: Legionella anisa


organism_name: Lawsonibacter sp.


organism_name: Taurinivorans muris


organism_name: Oscillibacter sp.


organism_name: Candidatus Avidehalobacter sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Alistipes sp.


organism_name: Evtepia sp.


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Faecalibaculum rodentium


organism_name: Adlercreutzia sp.


organism_name: Dubosiella sp.


organism_name: Acutalibacter sp.


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Mailhella sp.


organism_name: Vermiculatibacterium sp.


organism_name: Allobaculum fili


organism_name: Leptogranulimonas caecicola


organism_name: Dorea sp.


organism_name: Anaerotruncus sp.


organism_name: Escherichia coli


organism_name: Klebsiella pneumoniae


organism_name: Dubosiella muris


organism_name: Salmonella enterica


organism_name: Paludihabitans sp.


organism_name: Lentihominibacter sp.


organism_name: Roseburia sp.


organism_name: Angelakisella sp.


organism_name: Desulfovibrio sp.


organism_name: Faecalimonas sp.


organism_name: Candidatus Avidehalobacter sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Oscillospiraceae bacterium


organism_name: Petralouisia sp.


organism_name: Candidatus Enterenecus sp.


organism_name: Corynebacterium sp.


organism_name: Granulimonas faecalis


organism_name: Candidatus Pelethomonas sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Lachnospiraceae bacterium


organism_name: Bifidobacterium pseudolongum subsp. globosum


organism_name: Schaedlerella sp.


organism_name: Akkermansia muciniphila


organism_name: Lawsonibacter sp.


organism_name: Sporofaciens sp.


organism_name: Vermiculatibacterium sp.


organism_name: Bilophila sp.


organism_name: Bacteroidales bacterium


organism_name: Faecalimonas sp.


organism_name: Faecalibaculum rodentium


organism_name: Candidatus Avidehalobacter sp.


organism_name: Candidatus Fimenecus sp.


organism_name: Taurinivorans muris


organism_name: Adlercreutzia sp.


organism_name: Desulfovibrio sp.


organism_name: Allobaculum fili


organism_name: Petralouisia sp.


organism_name: Allobaculum sp.


organism_name: Kineothrix sp.


organism_name: Acutalibacter sp.


organism_name: Candidatus Enterenecus sp.


organism_name: Yaniella sp.


organism_name: Sporofaciens sp.


organism_name: Eubacterium sp.


organism_name: Paludihabitans sp.


organism_name: Schaedlerella sp.


organism_name: Alistipes sp.


organism_name: Lachnospiraceae bacterium


organism_name: Rikenella sp.


organism_name: Vermiculatibacterium sp.


organism_name: Akkermansia muciniphila


organism_name: Candidatus Fimenecus sp.


organism_name: Granulimonas faecalis


organism_name: Adlercreutzia sp.


organism_name: Lepagella sp.


organism_name: Allobaculum fili


organism_name: Hominibacterium sp.


organism_name: Ileibacterium valens


organism_name: Evtepia sp.


organism_name: Roseburia sp.


organism_name: Allobaculum sp.


organism_name: Negativibacillus sp.


organism_name: Bilophila sp.


organism_name: Faecalibaculum rodentium


organism_name: Candidatus Avidehalobacter sp.


organism_name: Faecalimonas sp.


organism_name: Laedolimicola sp.


organism_name: Taurinivorans muris


organism_name: Leptogranulimonas caecicola


organism_name: Dorea sp.


organism_name: Petralouisia sp.


organism_name: Candidatus Enterenecus sp.


organism_name: Desulfovibrio sp.


organism_name: Candidatus Aphodocola sp.


organism_name: Lawsonibacter sp.


organism_name: Candidatus Fimenecus sp.


organism_name: Muribaculaceae bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Ligilactobacillus murinus


organism_name: Schaedlerella sp.


organism_name: Granulimonas faecalis


organism_name: Angelakisella sp.


organism_name: Adlercreutzia sp.


organism_name: Faecalibaculum rodentium


organism_name: Desulfovibrionaceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Taurinivorans muris


organism_name: Oscillibacter sp.


organism_name: Evtepia sp.


organism_name: Sporofaciens sp.


organism_name: Akkermansia muciniphila


organism_name: Candidatus Avidehalobacter sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Lawsonibacter sp.


organism_name: Brotaphodocola sp.


organism_name: Kineothrix sp.


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome


organism_name: Muribaculaceae bacterium


organism_name: Allobaculum sp.


organism_name: Paludihabitans sp.


organism_name: Faecalimonas sp.


organism_name: Alistipes sp.


organism_name: Eubacterium sp.


organism_name: Desulfovibrio sp.


organism_name: Allobaculum fili


organism_name: Lachnospiraceae bacterium


organism_name: Leptogranulimonas caecicola


organism_name: Taurinivorans muris


organism_name: Eggerthellaceae bacterium


organism_name: Dubosiella muris


organism_name: Candidatus Fimenecus sp.


organism_name: Roseburia sp.


organism_name: Faecalibaculum rodentium


organism_name: Acutalibacter sp.


organism_name: Ileibacterium valens


organism_name: Lawsonibacter sp.


organism_name: Granulimonas faecalis


organism_name: Akkermansia muciniphila


organism_name: Schaedlerella sp.


organism_name: Adlercreutzia sp.


organism_name: Allobaculum sp.


organism_name: Evtepia sp.


organism_name: Lachnospiraceae bacterium


organism_name: Dorea sp.


organism_name: Desulfovibrio sp.


organism_name: Brotaphodocola sp.


organism_name: Dubosiella muris


organism_name: Sporofaciens sp.


organism_name: Candidatus Enterenecus sp.


organism_name: Vermiculatibacterium sp.


organism_name: Candidatus Pelethomonas sp.


organism_name: Paludihabitans sp.


organism_name: Kineothrix sp.


organism_name: Taurinivorans muris


organism_name: Granulimonas faecalis


organism_name: Anaerotruncus sp.


organism_name: Muribaculaceae bacterium


organism_name: Phocaeicola vulgatus


organism_name: Angelakisella sp.


organism_name: Petralouisia sp.


organism_name: Hominibacterium sp.


organism_name: Faecalibaculum rodentium


organism_name: Lawsonibacter sp.


organism_name: Lepagella sp.


organism_name: Schaedlerella sp.


organism_name: Tidjanibacter sp.


organism_name: Roseburia sp.


organism_name: Lachnospiraceae bacterium


organism_name: Akkermansia muciniphila


organism_name: Allobaculum fili


organism_name: Paludihabitans sp.


organism_name: Candidatus Avidehalobacter sp.


organism_name: Faecalimonas sp.


organism_name: Vermiculatibacterium sp.


organism_name: Adlercreutzia sp.


organism_name: Alistipes sp.


organism_name: Sporofaciens sp.


organism_name: Oscillibacter sp.


organism_name: Rikenella sp.


organism_name: Bacteroidales bacterium


organism_name: Desulfovibrio sp.


organism_name: Taurinivorans muris


organism_name: Ileibacterium valens


organism_name: Roseburia sp.


organism_name: Lentihominibacter sp.


organism_name: Muribaculaceae bacterium


organism_name: Leptogranulimonas caecicola


organism_name: Christensenella sp.


organism_name: Otoolea sp.


organism_name: Granulimonas faecalis


organism_name: Bifidobacterium pseudolongum subsp. globosum


organism_name: Evtepia sp.


organism_name: Anaerotruncus sp.


organism_name: Acetatifactor sp.


organism_name: Candidatus Amulumruptor sp.


organism_name: Alistipes sp.


organism_name: Vermiculatibacterium sp.


organism_name: Candidatus Enterenecus sp.


organism_name: Schaedlerella sp.


organism_name: Lepagella sp.


organism_name: Allobaculum sp.


organism_name: Candidatus Scatovivens sp.


organism_name: Dubosiella muris


organism_name: Petralouisia sp.


organism_name: Desulfovibrio sp.


organism_name: Faecalibaculum rodentium


organism_name: Granulimonas faecalis


organism_name: Adlercreutzia sp.


organism_name: Butyricicoccaceae bacterium


organism_name: Allobaculum fili


organism_name: Muribaculaceae bacterium


organism_name: Candidatus Pelethomonas sp.


organism_name: Acetatifactor sp.


organism_name: Candidatus Amulumruptor sp.


organism_name: Oscillibacter sp.


organism_name: Lachnospiraceae bacterium


organism_name: Claveliimonas sp.


organism_name: Lepagella sp.


organism_name: Suilimivivens sp.


organism_name: Rikenella sp.


organism_name: Dubosiella muris


organism_name: Acutalibacter sp.


organism_name: Paludihabitans sp.


organism_name: Alistipes sp.


organism_name: Candidatus Avidehalobacter sp.


organism_name: Candidatus Avimonas sp.


organism_name: Ileibacterium valens


organism_name: Desulfovibrio sp.


organism_name: Roseburia sp.


organism_name: Candidatus Paralachnospira sp.


organism_name: Candidatus Enterenecus sp.


organism_name: Christensenella sp.


organism_name: Bifidobacterium pseudolongum subsp. globosum


organism_name: Muribaculaceae bacterium


organism_name: Bilophila sp.


organism_name: Candidatus Pelethomonas sp.


organism_name: Mailhella sp.


organism_name: Lachnospiraceae bacterium


organism_name: Angelakisella sp.


organism_name: Vermiculatibacterium sp.


organism_name: Acetatifactor sp.


organism_name: Adlercreutzia caecimuris


organism_name: Allobaculum sp.


organism_name: Alistipes sp.


organism_name: Lawsonibacter sp.


organism_name: Leptogranulimonas caecicola


organism_name: Taurinivorans muris


organism_name: Lentihominibacter sp.


organism_name: Schaedlerella sp.


organism_name: Desulfovibrio sp.


organism_name: Muribaculaceae bacterium


organism_name: Dubosiella muris


organism_name: Allobaculum fili


organism_name: Eggerthellaceae bacterium


organism_name: Candidatus Avidehalobacter sp.


organism_name: Ileibacterium valens


organism_name: Granulimonas faecalis


organism_name: Candidatus Amulumruptor sp.


organism_name: Bifidobacterium pseudolongum subsp. globosum


organism_name: Dorea sp.


organism_name: Lactobacillus sp.


organism_name: Oscillibacter sp.


organism_name: Clostridia bacterium


organism_name: Leptogranulimonas caecicola


organism_name: Lawsonibacter sp.


organism_name: Taurinivorans muris


organism_name: Faecalibaculum rodentium


organism_name: Alistipes sp.


organism_name: Allobaculum sp.


organism_name: Vermiculatibacterium sp.


organism_name: Corynebacterium stationis


organism_name: Roseburia sp.


organism_name: Dubosiella muris


organism_name: Candidatus Enterenecus sp.


organism_name: Candidatus Pelethomonas sp.


organism_name: Lentihominibacter sp.


organism_name: Lachnospiraceae bacterium


organism_name: Desulfovibrio sp.


organism_name: Angelakisella sp.


organism_name: Allobaculum fili


organism_name: Oscillospiraceae bacterium


organism_name: Candidatus Avidehalobacter sp.


organism_name: Muribaculaceae bacterium


organism_name: Lepagella sp.


organism_name: Ileibacterium valens


organism_name: Bifidobacterium pseudolongum subsp. globosum


organism_name: Evtepia sp.


organism_name: Taurinivorans muris


organism_name: Lawsonibacter sp.


organism_name: Eggerthellaceae bacterium


organism_name: Schaedlerella sp.


organism_name: Acetatifactor sp.


organism_name: Leptogranulimonas caecicola


organism_name: Alistipes sp.


organism_name: Lentihominibacter sp.


organism_name: Dubosiella muris


organism_name: Granulimonas faecalis


organism_name: Desulfovibrio sp.


organism_name: Allobaculum sp.


organism_name: Candidatus Amulumruptor sp.


organism_name: Allobaculum fili


organism_name: Faecalibaculum rodentium


organism_name: Barnesiella intestinihominis


organism_name: Parabacteroides distasonis


organism_name: Anaerotardibacter sp.


organism_name: Bilophila wadsworthia


organism_name: [Eubacterium] siraeum


organism_name: Acutalibacteraceae bacterium


organism_name: Alistipes shahii


organism_name: Gemmiger qucibialis


organism_name: Ruminococcus sp.


organism_name: Oscillospiraceae bacterium


organism_name: Alistipes communis


organism_name: Alphaproteobacteria bacterium


organism_name: Akkermansia muciniphila


organism_name: Alistipes ihumii


organism_name: Candidatus Scatocola faecipullorum


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Parabacteroides sp.


organism_name: Bacteroides uniformis


organism_name: Leyella lascolaii


organism_name: Christensenellales bacterium


organism_name: Alistipes putredinis


organism_name: Hominicoprocola fusiformis


organism_name: Anaerotignum faecicola


organism_name: Odoribacter splanchnicus


organism_name: Xylanibacter rarus


organism_name: Phocaeicola vulgatus


organism_name: Phascolarctobacterium faecium


organism_name: Parabacteroides distasonis


organism_name: Bacteroides fragilis


organism_name: Agathobacter rectalis


organism_name: Acutalibacteraceae bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Barnesiella intestinihominis


organism_name: Gemmiger qucibialis


organism_name: Gemmiger formicilis


organism_name: Candidatus Metalachnospira sp.


organism_name: Bacteroides thetaiotaomicron


organism_name: Alistipes communis


organism_name: Flavonifractor plautii


organism_name: Parabacteroides merdae


organism_name: Bilophila wadsworthia


organism_name: Faecalibacterium longum


organism_name: Bifidobacterium adolescentis


organism_name: Faecalibacterium sp.


organism_name: Faecalibacterium taiwanense


organism_name: Ruminococcus callidus


organism_name: Bifidobacterium longum


organism_name: Anaerotignum faecicola


organism_name: Sutterella wadsworthensis


organism_name: Bacteroides ovatus


organism_name: Alistipes onderdonkii


organism_name: Alistipes inops


organism_name: Faecalibacterium duncaniae


organism_name: Alistipes ihumii


organism_name: Akkermansia muciniphila


organism_name: Bacteroides uniformis


organism_name: Vescimonas sp.


organism_name: Ruminococcus intestinalis


organism_name: Barnesiella intestinihominis


organism_name: Candidatus Fimenecus sp.


organism_name: Fusicatenibacter saccharivorans


organism_name: Dialister invisus


organism_name: Odoribacter splanchnicus


organism_name: Desulfovibrio sp.


organism_name: Hominimerdicola sp.


organism_name: Phocaeicola vulgatus


organism_name: Agathobacter rectalis


organism_name: Sutterella wadsworthensis


organism_name: Ructibacterium sp.


organism_name: Aristaeellaceae bacterium


organism_name: Alistipes communis


organism_name: Alistipes inops


organism_name: Gemmiger formicilis


organism_name: Paraprevotella clara


organism_name: Faecalibacterium intestinale


organism_name: Dysosmobacter welbionis


organism_name: Escherichia coli


organism_name: Fusicatenibacter saccharivorans


organism_name: Candidatus Scatocola faecigallinarum


organism_name: Candidatus Cryptobacteroides sp.


organism_name: Bilophila wadsworthia


organism_name: Bacteroides uniformis


organism_name: Akkermansia sp.


organism_name: Hominilimicola fabiformis


organism_name: Alistipes putredinis


organism_name: Holdemanella sp.


organism_name: Mediterraneibacter torques


organism_name: Phocaeicola vulgatus


organism_name: Alistipes onderdonkii


organism_name: Acidaminococcus intestini


organism_name: Sutterella sp.


organism_name: Eubacterium sp.


organism_name: Lachnospira sp.


organism_name: Hominimerdicola aceti


organism_name: Phascolarctobacterium faecium


organism_name: Collinsella sp.


organism_name: Parabacteroides distasonis


organism_name: Gemmiger formicilis


organism_name: Clostridium fessum


organism_name: Vescimonas coprocola


organism_name: Oscillibacter sp.


organism_name: Sutterella wadsworthensis


organism_name: Candidatus Fimenecus sp.


organism_name: Waltera acetigignens


organism_name: Faecalibacterium prausnitzii


organism_name: Candidatus Scatosoma sp.


organism_name: Prevotella sp.


organism_name: Christensenellaceae bacterium


organism_name: Haemophilus parainfluenzae


organism_name: Parabacteroides merdae


organism_name: Sutterella sp.


organism_name: Agathobacter rectalis


organism_name: Candidatus Limisoma sp.


organism_name: Alloprevotella sp.


organism_name: Lachnospiraceae bacterium


organism_name: Duodenibacillus massiliensis


organism_name: Dialister sp.


organism_name: Prevotellaceae bacterium


organism_name: Candidatus Scatocola faecigallinarum


organism_name: Bacteroides uniformis


organism_name: Vescimonas sp.


organism_name: Ruminococcus intestinalis


organism_name: Alistipes onderdonkii


organism_name: Parabacteroides distasonis


organism_name: Acutalibacteraceae bacterium


organism_name: Muribaculaceae bacterium


organism_name: Phascolarctobacterium faecium


organism_name: Brotocaccenecus cirricatena


organism_name: Bilophila wadsworthia


organism_name: Gemmiger qucibialis


organism_name: Bacteroides caccae


organism_name: Phocaeicola sp.


organism_name: Barnesiella intestinihominis


organism_name: Aristaeellaceae bacterium


organism_name: Parasutterella excrementihominis


organism_name: Roseburia faecis


organism_name: Angelakisella sp.


organism_name: Christensenellales bacterium


organism_name: Alistipes putredinis


organism_name: Dialister hominis


organism_name: Negativibacillus sp.


organism_name: Segatella copri


organism_name: Bifidobacterium adolescentis


organism_name: Alistipes ihumii


organism_name: Prevotella sp.


organism_name: Acidaminococcus intestini


organism_name: Dialister invisus


organism_name: Bacteroides uniformis


organism_name: Hominicoprocola fusiformis


organism_name: Candidatus Cryptobacteroides sp.


organism_name: Parabacteroides distasonis


organism_name: Vescimonas sp.


organism_name: Megasphaera massiliensis


organism_name: Roseburia inulinivorans


organism_name: Barnesiella intestinihominis


organism_name: Succiniclasticum sp.


organism_name: Phocaeicola vulgatus


organism_name: Candidatus Fimenecus sp.


organism_name: Oscillospiraceae bacterium


organism_name: Ruminococcus intestinalis


organism_name: Agathobacter rectalis


organism_name: Alistipes onderdonkii


organism_name: Gemmiger qucibialis


organism_name: Faecalibacterium prausnitzii


organism_name: Desulfovibrio sp.


organism_name: Gemmiger formicilis


group: archaea

organism_name: Methanobrevibacter smithii


organism_name: Alistipes putredinis


organism_name: Phocaeicola coprocola


organism_name: Streptococcus thermophilus


organism_name: Ruminococcus sp.


organism_name: Candidatus Apopatocola sp.


organism_name: Bacteroides caccae


organism_name: Mediterraneibacter torques


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small; genus undefined

organism_name: [Eubacterium] siraeum


organism_name: Collinsella sp.


organism_name: Escherichia coli


organism_name: Clostridia bacterium


organism_name: Megamonas funiformis


organism_name: Holdemanella sp.


organism_name: Lachnospiraceae bacterium


organism_name: Acutalibacteraceae bacterium


organism_name: Vescimonas sp.


organism_name: Lawsonibacter sp.


organism_name: Acetatifactor sp.


organism_name: Dubosiella muris


organism_name: Bacteroidales bacterium


organism_name: Petralouisia sp.


organism_name: Desulfovibrio sp.


organism_name: Alistipes sp.


organism_name: Allobaculum fili


organism_name: Taurinivorans muris


organism_name: Candidatus Pelethomonas sp.


organism_name: Leptogranulimonas caecicola


organism_name: Acutalibacter sp.


organism_name: Kineothrix sp.


organism_name: Adlercreutzia sp.


organism_name: Muribaculaceae bacterium


organism_name: Schaedlerella sp.


organism_name: Evtepia sp.


organism_name: Paludihabitans sp.


organism_name: Anaerotruncus sp.


organism_name: Candidatus Pseudobutyricicoccus sp.


organism_name: Lachnospiraceae bacterium


organism_name: Dubosiella muris


organism_name: Ileibacterium valens


organism_name: Bilophila sp.


organism_name: Acetatifactor sp.


organism_name: Desulfovibrionaceae bacterium


organism_name: Granulimonas faecalis


organism_name: Oscillibacter sp.


organism_name: Candidatus Pelethomonas sp.


organism_name: Petralouisia sp.


organism_name: Lepagella sp.


organism_name: Lentihominibacter sp.


organism_name: Muribaculaceae bacterium


organism_name: Suilimivivens sp.


organism_name: Desulfovibrio sp.


organism_name: Sporofaciens sp.


organism_name: Faecalibaculum rodentium


organism_name: Candidatus Avidehalobacter sp.


organism_name: Bacteroidales bacterium


organism_name: Leptogranulimonas caecicola


organism_name: Bifidobacterium pseudolongum subsp. globosum


organism_name: Acutalibacter sp.


organism_name: Acetatifactor sp.


organism_name: Adlercreutzia sp.


organism_name: Alistipes sp.


organism_name: Schaedlerella sp.


organism_name: Roseburia sp.


organism_name: Candidatus Pelethomonas sp.


organism_name: Granulimonas faecalis


organism_name: Muribaculaceae bacterium


organism_name: Vermiculatibacterium sp.


organism_name: Anaerotruncus sp.


organism_name: Candidatus Enterenecus sp.


organism_name: Lawsonibacter sp.


organism_name: Dubosiella muris


organism_name: Allobaculum fili


organism_name: Taurinivorans muris


organism_name: Leptogranulimonas caecicola


organism_name: Romboutsia ilealis


organism_name: Candidatus Pseudobutyricicoccus sp.


organism_name: Lachnospiraceae bacterium


organism_name: Ileibacterium valens


organism_name: Evtepia sp.


organism_name: Faecalibaculum rodentium


organism_name: Candidatus Avidehalobacter sp.


organism_name: Alistipes sp.


organism_name: Sporofaciens sp.


organism_name: Petralouisia sp.


organism_name: Paludihabitans sp.


organism_name: Muribaculaceae bacterium


organism_name: Anaerotruncus sp.


organism_name: Acetatifactor sp.


organism_name: Candidatus Enterenecus sp.


organism_name: Bilophila sp.


organism_name: Candidatus Scatovivens sp.


organism_name: Acutalibacter sp.


organism_name: Salmonella enterica


organism_name: Schaedlerella sp.


organism_name: Lawsonibacter sp.


organism_name: Candidatus Pseudobutyricicoccus sp.


organism_name: Adlercreutzia sp.


organism_name: Lachnospiraceae bacterium


organism_name: Angelakisella sp.


organism_name: Allobaculum fili


organism_name: Petralouisia sp.


organism_name: Bacteroidales bacterium


organism_name: Leptogranulimonas caecicola


organism_name: Mediterraneibacter torques


organism_name: Bilophila wadsworthia


organism_name: Desulfovibrio piger


organism_name: Parabacteroides distasonis


organism_name: Alistipes onderdonkii


organism_name: Hafnia alvei


organism_name: Salmonella enterica


organism_name: Odoribacter splanchnicus


organism_name: Mediterraneibacter gnavus


organism_name: Phocaeicola dorei


organism_name: Alistipes putredinis


organism_name: Blautia stercoris


organism_name: Dialister invisus


organism_name: Barnesiella intestinihominis


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genome length too small

organism_name: Hominicoprocola fusiformis


organism_name: Agathobacter rectalis


organism_name: Waltera acetigignens


organism_name: Candidatus Fimenecus sp.


organism_name: Coprococcus aceti


organism_name: Hominimerdicola sp.


organism_name: Ruminococcus callidus


organism_name: Parabacteroides merdae


organism_name: Ruminococcus intestinalis


organism_name: Salmonella enterica


organism_name: Vescimonas sp.


organism_name: Muribaculaceae bacterium


organism_name: Bilophila wadsworthia


organism_name: Bacteroides uniformis


organism_name: Oscillospiraceae bacterium


organism_name: Anaerotignum faecicola


organism_name: Segatella copri


organism_name: Gemmiger formicilis


organism_name: Akkermansia muciniphila


organism_name: Jutongia sp.


asm_submitter: Public Health England

organism_name: Campylobacter jejuni


organism_name: Anaerovoracaceae bacterium


organism_name: Alistipes inops


organism_name: Parabacteroides distasonis


organism_name: Acidaminococcus intestini


organism_name: Agathobacter rectalis


organism_name: Megamonas funiformis


organism_name: Salmonella enterica


organism_name: Sutterella wadsworthensis


organism_name: Alistipes indistinctus


organism_name: Acutalibacteraceae bacterium


organism_name: Phascolarctobacterium faecium


organism_name: Alistipes ihumii


organism_name: Candidatus Stercorousia sp.


organism_name: Hominisplanchenecus faecis


organism_name: Leyella stercorea


organism_name: Faecalibacterium sp.


organism_name: Hominimerdicola aceti


organism_name: Dialister invisus


organism_name: Limosilactobacillus mucosae


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; genome length too small

organism_name: Anaerostipes amylophilus


organism_name: Ruminococcoides intestinale


organism_name: Roseburia faecis


organism_name: Bacteroides uniformis


organism_name: Parabacteroides merdae


organism_name: Hominilimicola fabiformis


organism_name: Salmonella enterica


organism_name: [Lactobacillus] rogosae


organism_name: Bifidobacterium adolescentis


organism_name: Campylobacter jejuni


organism_name: Bacteroides eggerthii


organism_name: Bilophila sp.


organism_name: Sutterella wadsworthensis


organism_name: Campylobacter coli


organism_name: Faecalibacterium taiwanense


asm_submitter: Health Protection Agency

organism_name: Shigella sonnei


organism_name: Bifidobacterium longum


organism_name: Fusicatenibacter saccharivorans


organism_name: Shigella flexneri


organism_name: Megasphaera massiliensis


organism_name: Parabacteroides distasonis


organism_name: Escherichia coli


organism_name: Enterocloster bolteae


organism_name: Dialister hominis


organism_name: Bacteroides ovatus


organism_name: Megasphaera cerevisiae


organism_name: Pectinatus cerevisiiphilus


organism_name: Veillonella atypica


organism_name: Parabacteroides goldsteinii


organism_name: Enterocloster sp.


organism_name: Salmonella enterica


organism_name: Bacteroides thetaiotaomicron


organism_name: Megasphaera geminata


organism_name: Dialister invisus


organism_name: Bilophila wadsworthia


organism_name: Hominimerdicola aceti


organism_name: Flavonifractor plautii


organism_name: Pauljensenia sp.


organism_name: Roseburia intestinalis


organism_name: Enterocloster clostridioformis


organism_name: Eubacterium sp.


organism_name: Veillonella parvula


organism_name: Agathobacter rectalis


organism_name: Sutterella wadsworthensis


organism_name: Ruthenibacterium lactatiformans


organism_name: Prevotella sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Alistipes onderdonkii


organism_name: Streptococcus salivarius


organism_name: Alloprevotella sp.


organism_name: Vescimonas coprocola


organism_name: Xylanibacter sp.


organism_name: Segatella copri


organism_name: Candidatus Limisoma sp.


organism_name: Phocaeicola coprocola


organism_name: Hominicoprocola fusiformis


organism_name: Phocaeicola plebeius


organism_name: Alistipes putredinis


organism_name: Alistipes hominis


organism_name: Phocaeicola sp.


organism_name: Bacteroides clarus


organism_name: Phascolarctobacterium succinatutens


organism_name: Bacteroides uniformis


organism_name: Candidatus Cryptobacteroides sp.


organism_name: Bilophila wadsworthia


organism_name: Candidatus Fimivicinus sp.


organism_name: Roseburia intestinalis


organism_name: Prevotella sp.


organism_name: Bacteroides ovatus


organism_name: Phocaeicola vulgatus


organism_name: Alistipes ihumii


organism_name: Phocaeicola coprophilus


organism_name: Agathobacter rectalis


organism_name: Fusobacterium mortiferum


organism_name: Sutterella wadsworthensis


organism_name: Paraprevotella xylaniphila


organism_name: Alistipes finegoldii


organism_name: Parabacteroides distasonis


organism_name: Ruminococcoides intestinale


organism_name: Alistipes onderdonkii


organism_name: Phocaeicola fibrisolvens


organism_name: Alistipes putredinis


organism_name: Parabacteroides merdae


organism_name: Hominimerdicola aceti


organism_name: Akkermansia muciniphila


organism_name: Ellagibacter isourolithinifaciens


organism_name: Faecalibacterium hattorii


organism_name: Aristaeellaceae bacterium


organism_name: Vescimonas coprocola


organism_name: Alistipes ihumii


organism_name: Prevotella sp.


organism_name: Candidatus Limisoma sp.


organism_name: Lachnospira sp.


organism_name: Barnesiella intestinihominis


organism_name: Candidatus Cryptobacteroides sp.


organism_name: Alistipes hominis


organism_name: Parabacteroides distasonis


organism_name: Alistipes shahii


organism_name: Phocaeicola plebeius


organism_name: Paraprevotella clara


organism_name: Faecalibacterium prausnitzii


organism_name: Ruminococcoides intestinale


organism_name: Ruminococcus sp.


organism_name: Desulfovibrio sp.


organism_name: Parabacteroides merdae


organism_name: Christensenellales bacterium


organism_name: Eubacterium sp.


organism_name: Dialister sp.


organism_name: Bacteroides uniformis


organism_name: Xylanibacter rarus


organism_name: Streptococcus salivarius


organism_name: Gemmiger formicilis


organism_name: Acutalibacteraceae bacterium


organism_name: Candidatus Fimenecus sp.


organism_name: Hominicoprocola sp.


organism_name: Alloprevotella sp.


organism_name: Coprococcus sp.


organism_name: Eubacteriales bacterium


organism_name: Coprococcus aceti


organism_name: Candidatus Cryptobacteroides sp.


organism_name: Bacilli bacterium


organism_name: Segatella copri


organism_name: Jutongia sp.


organism_name: Paraprevotella clara


organism_name: Bifidobacterium adolescentis


organism_name: Agathobacter rectalis


organism_name: Escherichia coli


organism_name: Vescimonas sp.


organism_name: Bilophila wadsworthia


organism_name: Faecousia sp.


organism_name: Parabacteroides distasonis


organism_name: Prevotella sp.


organism_name: Vescimonas fastidiosa


organism_name: Alistipes shahii


organism_name: Alistipes dispar


organism_name: Gemmiger qucibialis


organism_name: Candidatus Ventricola sp.


organism_name: Coprococcus aceti


organism_name: Alistipes putredinis


organism_name: Clostridium fessum


organism_name: Eubacterium sp.


organism_name: Phascolarctobacterium succinatutens


organism_name: Segatella copri


organism_name: Waltera acetigignens


organism_name: [Eubacterium] siraeum


organism_name: Acutalibacteraceae bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Candidatus Limisoma sp.


organism_name: Gemmiger sp.


organism_name: Bacteroides uniformis


organism_name: Oscillibacter sp.


organism_name: Roseburia amylophila


organism_name: Streptococcus thermophilus


organism_name: Holdemanella sp.


asm_submitter: Huaqiao University

assembly_level: Complete Genome

organism_name: Tenacibaculum sp. DPLXC6


organism_name: Desulfovibrio sp.


organism_name: Dorea longicatena


organism_name: Eubacterium sp.


organism_name: Acidaminococcus intestini


organism_name: Akkermansia muciniphila


asm_submitter: University of York

assembly_level: Chromosome

infraspecific_name: strain=Ancestor

organism_name: Ralstonia solanacearum


organism_name: Coprococcus sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Eubacteriales bacterium


organism_name: Candidatus Oscillibacter excrementavium


organism_name: Butyricimonas paravirosa


organism_name: Sodaliphilus pleomorphus


organism_name: Anaerotardibacter sp.


organism_name: Bacteroides uniformis


organism_name: Alistipes ihumii


organism_name: Dialister succinatiphilus


organism_name: Christensenellales bacterium


asm_submitter: Nankai

excluded_from_refseq: many frameshifted proteins

infraspecific_name: strain=XM

organism_name: Enterobacter sp. XM


organism_name: Parabacteroides distasonis


organism_name: Hominimerdicola sp.


organism_name: Dakarella massiliensis


asm_submitter: Central South University

organism_name: Streptomyces sp. CB03629


organism_name: Candidatus Pelethousia gallinarum


organism_name: Candidatus Coliplasma sp.


organism_name: Ruminococcus sp.


organism_name: Barnesiella intestinihominis


organism_name: Acutalibacteraceae bacterium


organism_name: Collinsella sp.


organism_name: Faecalibacterium taiwanense


organism_name: Faecousia sp.


organism_name: Bifidobacterium longum


organism_name: Candidatus Egerieisoma faecipullorum


organism_name: Oscillospiraceae bacterium


organism_name: Escherichia coli


organism_name: Ruthenibacterium lactatiformans


organism_name: Ruminococcoides intestinale


organism_name: Bacteroides intestinalis


organism_name: Candidatus Metalachnospira gallinarum


organism_name: Ellagibacter isourolithinifaciens


organism_name: Candidatus Alistipes stercorigallinarum


organism_name: Christensenellales bacterium


organism_name: Bifidobacterium adolescentis


organism_name: Clostridia bacterium


organism_name: Alistipes putredinis


asm_submitter: Forsyth Institute

infraspecific_name: strain=MU

organism_name: Helicobacter bilis

refseq_category: reference genome


organism_name: Phocaeicola salanitronis


organism_name: Vescimonas sp.


organism_name: Eubacteriales bacterium


organism_name: [Eubacterium] siraeum


organism_name: Alistipes onderdonkii


organism_name: Faecalibacterium duncaniae


organism_name: Cutibacterium acnes


organism_name: Barnesiella intestinihominis


organism_name: Bacteroides uniformis


organism_name: Enterocloster sp.


organism_name: Anaerotignum faecicola


organism_name: Parabacteroides distasonis


organism_name: Butyricimonas faecihominis


organism_name: Bacteroides ovatus


organism_name: Agathobacter rectalis


organism_name: Candidatus Alangreenwoodia sp.


organism_name: Ruminococcoides intestinale


organism_name: Eubacterium sp.


organism_name: Alistipes ihumii


organism_name: Phocaeicola vulgatus


organism_name: Candidatus Scatocola faecipullorum


organism_name: Sutterella wadsworthensis


organism_name: Gemmiger formicilis


organism_name: Xylanibacter rarus


organism_name: Bacteroides stercoris


organism_name: Acidaminococcus intestini


organism_name: Phascolarctobacterium faecium


organism_name: Odoribacter splanchnicus


organism_name: Desulfovibrio sp.


organism_name: Alistipes putredinis


organism_name: Akkermansia muciniphila


organism_name: Barnesiella intestinihominis


organism_name: Candidatus Scatocola faecigallinarum


organism_name: Segatella copri


organism_name: Ruminococcus intestinalis


organism_name: Porphyromonas asaccharolytica


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Gallintestinimicrobium sp.


organism_name: Bacteroides sp.


organism_name: Peptoniphilus harei


organism_name: Bacteroides clarus


organism_name: Dialister hominis


organism_name: Vescimonas sp.


organism_name: Roseburia faecis


organism_name: Suilimivivens sp.


organism_name: Huintestinicola butyrica


organism_name: Ruminococcoides intestinale


organism_name: Agathobacter rectalis


organism_name: Gemmiger formicilis


organism_name: Roseburia amylophila


organism_name: Parabacteroides distasonis


organism_name: Gemmiger qucibialis


organism_name: Candidatus Fimenecus sp.


organism_name: Candidatus Cryptobacteroides sp.


organism_name: Bifidobacterium adolescentis


organism_name: Alistipes putredinis


organism_name: Akkermansia muciniphila


organism_name: Faecalibacterium longum


organism_name: Megamonas funiformis


organism_name: Alphaproteobacteria bacterium


organism_name: Peptoniphilus harei


organism_name: Sutterella wadsworthensis


organism_name: Acutalibacteraceae bacterium


organism_name: Phocaeicola vulgatus


organism_name: Candidatus Ventricola sp.


organism_name: Bilophila wadsworthia


organism_name: Oscillospiraceae bacterium


organism_name: Agathobacter rectalis


organism_name: Alistipes finegoldii


organism_name: Faecousia sp.


organism_name: Vescimonas coprocola


organism_name: Faecalibacterium duncaniae


organism_name: Alistipes indistinctus


organism_name: Segatella copri


organism_name: Gemmiger formicilis


organism_name: Barnesiella intestinihominis


organism_name: Collinsella sp.


organism_name: Ruminococcoides intestinale


organism_name: Candidatus Fimenecus sp.


organism_name: Alistipes communis


organism_name: Angelakisella sp.


organism_name: Fusobacterium massiliense


organism_name: Eubacterium sp.


organism_name: Oscillospiraceae bacterium


organism_name: Oscillibacter sp.


organism_name: Hominimerdicola aceti


organism_name: Faecalibacterium prausnitzii


organism_name: Roseburia faecis


organism_name: Negativibacillus sp.


organism_name: Bacteroides uniformis


organism_name: Vescimonas sp.


organism_name: Fusobacterium animalis


organism_name: Phascolarctobacterium succinatutens


organism_name: Parabacteroides distasonis


organism_name: Hominicoprocola fusiformis


organism_name: Candidatus Scatocola faecigallinarum


organism_name: Alistipes putredinis


organism_name: Parabacteroides merdae


organism_name: Brotocaccenecus cirricatena


organism_name: Ruminococcus sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Roseburia amylophila


organism_name: Alistipes communis


organism_name: Alistipes ihumii


organism_name: Blautia faecis


organism_name: Blautia wexlerae


organism_name: Gemmiger formicilis


organism_name: Eubacterium sp.


organism_name: Anaerobutyricum hallii


organism_name: Christensenellales bacterium


organism_name: Bifidobacterium pseudocatenulatum


organism_name: Gemmiger qucibialis


organism_name: Butyribacter sp.


organism_name: Ruminococcoides intestinale


organism_name: Barnesiella intestinihominis


organism_name: Fusobacterium nucleatum subsp. nucleatum


organism_name: Bacteroides ovatus


organism_name: Alistipes inops


organism_name: Anthropogastromicrobium aceti


organism_name: Bacteroides fragilis


organism_name: Oscillospiraceae bacterium


organism_name: Candidatus Barnesiella merdigallinarum


organism_name: Faecalibacterium longum


organism_name: Fusobacterium pseudoperiodonticum


organism_name: Akkermansia muciniphila


organism_name: Phascolarctobacterium faecium


organism_name: Segatella copri


organism_name: Alistipes putredinis


organism_name: Faecalibacterium prausnitzii


organism_name: Acidaminococcus intestini


organism_name: Candidatus Limisoma sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Paraprevotella clara


organism_name: Megamonas funiformis


organism_name: Sutterella wadsworthensis


organism_name: Prevotella sp.


organism_name: Catenibacterium mitsuokai


organism_name: Agathobacter rectalis


organism_name: Enterocloster sp.


organism_name: Phocaeicola coprophilus


organism_name: Parabacteroides faecalis


organism_name: Oscillospiraceae bacterium


organism_name: Gemmiger qucibialis


organism_name: Alistipes finegoldii


organism_name: Parabacteroides merdae


organism_name: Bacteroides thetaiotaomicron


organism_name: Bacteroides uniformis


excluded_from_refseq: unverified source organism

organism_name: Fusobacterium polymorphum


organism_name: Faecalibacterium longum


organism_name: Oscillibacter sp.


organism_name: Alistipes shahii


organism_name: Butyricimonas faecihominis


organism_name: Christensenellales bacterium


organism_name: Gemmiger formicilis


organism_name: Fusobacterium animalis


organism_name: Odoribacter splanchnicus


organism_name: Bacteroides hominis


organism_name: Vescimonas sp.


organism_name: Eubacterium sp.


organism_name: Ruminococcoides intestinale


organism_name: Parabacteroides distasonis


organism_name: Escherichia coli


organism_name: Roseburia amylophila


organism_name: Oscillospiraceae bacterium


organism_name: Barnesiella intestinihominis


organism_name: Cloacibacillus porcorum


organism_name: Bifidobacterium adolescentis


organism_name: Phocaeicola vulgatus


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


asm_submitter: Research Center of Biotechnology

excluded_from_refseq: genus undefined

organism_name: Halobacteroidaceae bacterium Z-7090


asm_submitter: National Chung Hsing University

organism_name: Staphylococcus aureus


organism_name: Fusobacterium vincentii


asm_submitter: State of Oceanic Administration

infraspecific_name: strain=KCTC 13724

organism_name: Priestia sp. KCTC 13724


asm_submitter: Nanjing Agricultural University

organism_name: Bordetella bronchiseptica


asm_submitter: Max Rubner-Institut

organism_name: Acinetobacter baumannii


asm_submitter: Mohanlal Sukhadia University

infraspecific_name: strain=LB 65

organism_name: Bacillus anthracis


asm_submitter: ICAR-IVRI


asm_submitter: Faculty of Medicine, Yangzhou University

organism_name: Klebsiella pneumoniae


organism_name: Enterobacter hormaechei


organism_name: Escherichia coli


asm_submitter: Medical Faculty, Otto-von-Guericke University Magdeburg


asm_submitter: German Federal Institute for Risk Assessment

organism_name: Vibrio vulnificus


asm_submitter: Second Affliated hospital of Zhejiang University


asm_submitter: Hunan Agricultural University

organism_name: Stutzerimonas stutzeri


asm_submitter: South China University of Technology

organism_name: Thiomonas sp. DCM-2


asm_submitter: Anhui Agricultural University

organism_name: Streptomyces sp. Q2


asm_submitter: University of Idaho

organism_name: Paenibacillus larvae subsp. larvae


asm_submitter: University of Gothenburg - CCUG

organism_name: Salinispora sp. CH2A1_6


organism_name: Salinispora sp. CH2A1_3


asm_submitter: Heze University

organism_name: Lactiplantibacillus plantarum


asm_submitter: Forsyth Institute

organism_name: Fusobacterium polymorphum


asm_submitter: Taichung Veterans General Hospital


asm_submitter: The University of Hong Kong

organism_name: Lachnospiraceae bacterium


organism_name: Muribaculaceae bacterium


organism_name: Parasutterella excrementihominis


organism_name: Coprococcus sp.


organism_name: Bilophila sp.


organism_name: Agathobacter rectalis


organism_name: Akkermansia muciniphila


organism_name: Hominimerdicola aceti


organism_name: Candidatus Limiplasma merdipullorum


organism_name: Collinsella sp.


organism_name: Coprococcus aceti


organism_name: Hominicoprocola fusiformis


organism_name: Alistipes onderdonkii


organism_name: Candidatus Merdibacter merdipullorum


organism_name: Alistipes communis


organism_name: Parabacteroides goldsteinii


organism_name: Candidatus Avimicrobium sp.


organism_name: Bacteroides stercoris


organism_name: Faecalibacterium duncaniae


organism_name: Fusobacterium vincentii


asm_submitter: University of Southern Denmark

organism_name: Geobacter psychrophilus


organism_name: Waltera acetigignens


asm_submitter: University of Central Punjab, Lahore

organism_name: Bacillus safensis


organism_name: Fusobacterium polymorphum


asm_submitter: Korea Research Institute of Bioscience and Biotechnology

organism_name: Pseudomonas sp. AK-TSAG1-1


asm_submitter: Ningbo University

organism_name: Pseudomonas fulva


organism_name: Erwinia sp. AK-PDG3-5


asm_submitter: Shandong University

organism_name: Sphingomonas sp. BLHR8


organism_name: Sphingomonas sp. SDUR79


organism_name: Sphingosinicella sp. SM1-17


asm_submitter: Shenzhen Hospital, Southern Medical University

organism_name: Klebsiella pneumoniae


organism_name: Escherichia coli


organism_name: Petralouisia sp.


organism_name: Fusobacterium animalis


organism_name: Lachnospiraceae bacterium


asm_submitter: Animal and Plant Health Agency

excluded_from_refseq: from large multi-isolate project

organism_name: Pasteurella multocida


asm_submitter: Centers for Disease Control and Prevention

organism_name: Campylobacter upsaliensis


organism_name: Campylobacter jejuni


asm_submitter: University of KwaZulu-Natal


asm_submitter: UMBC

organism_name: Halobacterium salinarum


organism_name: Fusobacterium vincentii


organism_name: Fusobacterium polymorphum


asm_submitter: CDC


asm_submitter: National Center for Biotechnology Information

organism_name: Yersinia enterocolitica


infraspecific_name: strain=ATCC 51191

organism_name: Fusobacterium animalis ATCC 51191

relation_to_type_material: assembly from type material


organism_name: Treponema denticola


infraspecific_name: strain=ATCC 35405


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Acinetobacter baumannii


organism_name: Neisseria gonorrhoeae


organism_name: Streptococcus pyogenes


organism_name: Neisseria meningitidis


infraspecific_name: strain=ATCC 33520

organism_name: Treponema denticola ATCC 33520


asm_submitter: University of Jyvaskyla

organism_name: Flavobacterium sp. B114r


organism_name: Escherichia coli


organism_name: Flavobacterium sp. B167r


organism_name: Flavobacterium sp. B330r


annotation_name: Annotation submitted by Health Canada

annotation_provider: Health Canada

asm_submitter: Health Canada

organism_name: Clostridium botulinum


asm_submitter: Public Health England

organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Chester


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


asm_submitter: South China Agricultural University

organism_name: Vibrio rotiferianus


asm_submitter: Chung-Ang university

organism_name: Pseudogulbenkiania sp. AW2-16


asm_submitter: University of Sao Paulo

organism_name: Proteus mirabilis


asm_submitter: Hunan Agricultural University

organism_name: Enterococcus faecium


asm_submitter: FDA

organism_name: Campylobacter jejuni


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


asm_submitter: jiangnan

organism_name: Bacteroides uniformis


asm_submitter: HuNBiome

excluded_from_refseq: missing tRNA genes

organism_name: Lactobacillus gasseri


asm_submitter: Hebei University

organism_name: Bacillus thuringiensis


organism_name: Haemophilus influenzae


asm_submitter: TRR 261

infraspecific_name: strain=DSM 40667

organism_name: Streptomyces varsoviensis


asm_submitter: SUSTEMICROP

organism_name: Streptomyces sirii


organism_name: Acinetobacter baumannii


organism_name: Streptomyces flavofungini


organism_name: Klebsiella pneumoniae


asm_submitter: Georg-August-University Goettingen

organism_name: Serratia plymuthica


asm_submitter: CDC

organism_name: Escherichia coli


asm_submitter: National Center for Biotechnology Information

isolate: ECDC 1740


isolate: ECDC 1757


isolate: ECDC 1750


isolate: ECDC 1744


isolate: ECDC 1742


isolate: ECDC 1752


isolate: ECDC 1748


isolate: ECDC 1764


isolate: ECDC 1749


isolate: ECDC 1767


isolate: ECDC 1768


isolate: ECDC 1758


asm_submitter: Federal University of Technology Owerri

excluded_from_refseq: annotation fails completeness check


asm_submitter: Technical University of Denmark

organism_name: Amycolatopsis sp. CA-211722


asm_submitter: Rajiv Gandhi Centre for Biotechnology

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Helicobacter pylori


asm_submitter: Center for Advanced Studies in Arid Zones (CEAZA)


asm_submitter: Centers for Disease Control and Prevention


asm_submitter: Carl von Ossietzky University Oldenburg

organism_name: Proteus mirabilis


organism_name: Salmonella enterica


organism_name: Shigella flexneri


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion


organism_name: Enterobacter hormaechei


organism_name: Pseudomonas aeruginosa


asm_submitter: University of Kentucky

organism_name: Mycoplasma mycoides subsp. capri


asm_submitter: Rutgers University

organism_name: Desulfoluna sp. HI9BLuna


organism_name: Shigella sonnei


isolate: ECDC 1737


organism_name: Campylobacter jejuni


organism_name: Desulfoluna sp. CYM3A


organism_name: Desulfuromonadaceae bacterium NS4ri1


organism_name: Acinetobacter baumannii


asm_submitter: FDA


infraspecific_name: strain=Isolate 5


asm_submitter: ATCC

organism_name: Lactobacillus taiwanensis


asm_submitter: NSW Department of Primary Industries

organism_name: Xanthomonas citri pv. citri


organism_name: Escherichia coli


asm_submitter: Vet-LIRN-CVM-FDA

organism_name: Staphylococcus pseudintermedius


organism_name: Campylobacter coli


organism_name: Enterococcus faecium


organism_name: Campylobacter lari


organism_name: Enterobacter kobei


organism_name: Providencia rettgeri


organism_name: Serratia marcescens


organism_name: Salmonella enterica subsp. arizonae serovar 40:z36:-


asm_submitter: Northern Illinois University

organism_name: Synechococcales cyanobacterium MV1218C


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul


organism_name: Salmonella enterica subsp. enterica serovar Oranienburg


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Pseudomonas aeruginosa


organism_name: Synechococcales cyanobacterium MV1715


asm_submitter: University of Zurich

organism_name: Campylobacter jejuni


asm_submitter: BUAP

organism_name: Bacillus thuringiensis


organism_name: Klebsiella pneumoniae


asm_submitter: National Center for Biotechnology Information

organism_name: Enterococcus faecium


asm_submitter: CDC

organism_name: Escherichia coli


organism_name: Synechococcales cyanobacterium MVD013D


asm_submitter: Huazhong Agricultural University

excluded_from_refseq: contaminated; unverified source organism

organism_name: Massilia sp. M16


asm_submitter: Rajiv Gandhi Centre for Biotechnology

organism_name: Helicobacter pylori


asm_submitter: ICMR-Vector Control Research Centre

organism_name: Bacillus thuringiensis serovar israelensis


asm_submitter: Seoul Metropolitan Government Research Institute of Public Health and Environment

organism_name: Staphylococcus pseudintermedius


organism_name: Massilia sp. M117


asm_submitter: Shandong Agricultural University

organism_name: Bacillus halotolerans


organism_name: Salmonella enterica subsp. enterica serovar Give


organism_name: Salmonella enterica subsp. enterica serovar Anatum


organism_name: Salmonella enterica subsp. enterica serovar Ohio


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Altona


organism_name: Shigella flexneri


asm_submitter: University of Sao Paulo

organism_name: Proteus mirabilis


asm_submitter: ANLIS "Dr. Carlos G. Malbran"

organism_name: Pseudomonas aeruginosa


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Klebsiella oxytoca


asm_submitter: Federal Institute for Risk Assessment

excluded_from_refseq: genome length too large

organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Klebsiella pneumoniae


asm_submitter: Leiden University

organism_name: Pseudonocardia sp. ZF1


organism_name: Escherichia coli


asm_submitter: Qingdao Agricultural Universtiy

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


asm_submitter: south china agriculture university


asm_submitter: shaoxing people's hospital


asm_submitter: McMaster University

organism_name: Streptomyces sp. WAC00040


asm_submitter: Havforskningsinstituttet

organism_name: Vibrio parahaemolyticus


asm_submitter: Ghent University

organism_name: Hymenobacter sp. R533113


asm_submitter: Massachusetts Eye and Ear Infirmary

organism_name: Staphylococcus aureus


asm_submitter: University of Hawaii at Manoa

organism_name: Xanthomonas euvesicatoria


asm_submitter: IFSC USP

excluded_from_refseq: fragmented assembly


infraspecific_name: strain=SA43 LNZ A28


infraspecific_name: strain=SA43 LNZ A34


asm_submitter: Uppsala University


asm_submitter: East China University of Science and Technology

organism_name: Cereibacter sphaeroides


asm_submitter: UNESP


asm_submitter: Guangxi University

organism_name: Bacillus altitudinis


asm_submitter: Dalian University of Technology

organism_name: Stutzerimonas frequens


asm_submitter: Anhui Agricultural University


asm_submitter: Karmaveer Bhaurao Patil College, Vashi (Empowered Autonomous)

infraspecific_name: strain=Bacillus

organism_name: Bacillus stercoris


asm_submitter: Chonnam National University

organism_name: Photobacterium damselae subsp. damselae


asm_submitter: Pukyong National University

organism_name: Bacillus subtilis


asm_submitter: Federal University Parana

organism_name: Priestia sp. 3CA3


organism_name: Paenibacillus sp. 1SOY10


organism_name: Streptomyces sp. 1LA1


organism_name: Streptomyces sp. 3LA18


asm_submitter: Bose Institute

organism_name: Ancylobacter sp. TW_SC_1


organism_name: Streptomyces sp. TRD_SC_5


asm_submitter: Ningbo Municipal Center for Disease Control and Prevention

organism_name: Legionella pneumophila


asm_submitter: University of Tuebingen

organism_name: Corynebacterium rhinophilum


asm_submitter: Universidade Federal do Parana

organism_name: Klebsiella pneumoniae subsp. ozaenae


organism_name: Klebsiella pneumoniae


asm_submitter: Nanjing Normal University

organism_name: Brevibacterium sp. OS20


organism_name: Rhodococcus sp. OS5


asm_submitter: Universidad de Buenos Aires, CONICET

organism_name: Klebsiella grimontii


organism_name: Serratia ureilytica


organism_name: Priestia aryabhattai


organism_name: Enterobacter ludwigii


organism_name: Enterobacter wuhouensis


organism_name: Klebsiella variicola


asm_submitter: Laboratory of Metabolic Biophysics and Applied Pharmacology (LR12ES02),

organism_name: Escherichia coli


asm_submitter: Inner Mongolia Agricultural University

organism_name: Leuconostoc citreum


asm_submitter: Shandong University,Qingdao

isolate: human

organism_name: Bacillati bacterium HA8407


asm_submitter: The James Hutton Institute

organism_name: Bradyrhizobium ferriligni


asm_submitter: Hellenic Centre for Marine Research

organism_name: Lactococcus garvieae


asm_submitter: China agriculture university

organism_name: Bacillus sp. MC1252


asm_submitter: Peking University

organism_name: Methylocystis sp. Uni0008


organism_name: Rossellomorea sp. H136


asm_submitter: Leibniz-Institut DSMZ - German Collection of Microorganisms and Cell Cultures GmbH

infraspecific_name: strain=DSM 111618

organism_name: Kerstersia gyiorum


infraspecific_name: strain=DSM 111617


infraspecific_name: strain=DSM 111616


infraspecific_name: strain=DSM 110459


infraspecific_name: strain=DSM 110458


infraspecific_name: strain=DSM 109564


infraspecific_name: strain=DSM 109003


infraspecific_name: strain=DSM 109002


infraspecific_name: strain=DSM 109001


infraspecific_name: strain=DSM 108180


infraspecific_name: strain=DSM 108176


infraspecific_name: strain=DSM 107745


infraspecific_name: strain=DSM 107564


infraspecific_name: strain=DSM 105837


infraspecific_name: strain=DSM 103762


asm_submitter: American University of Beirut


asm_submitter: Seoul Metropolitan Government Research Institute of Public Health and Environment

organism_name: Staphylococcus pseudintermedius


asm_submitter: NSU Genome Research Institute (NGRI)

organism_name: Klebsiella quasipneumoniae


annotation_name: Annotation submitted by Friedrich Schiller University

annotation_provider: Friedrich Schiller University

asm_submitter: Friedrich Schiller University Jena

organism_name: Maribacter sp. UH1


organism_name: Aurantibacter sp. UH7


organism_name: Maribacter sp. MS6


asm_submitter: Chinese Marine University

infraspecific_name: strain=F

isolate: Ocean water

organism_name: Salipiger thiooxidans


organism_name: Rhodopirellula sp. UH5


asm_submitter: Zhejiang Provincial People's Hospital

organism_name: Pseudomonas aeruginosa


asm_submitter: National Centre for the Prevention & Control of Plant Pests & Animal Diseases (WEQAA)

organism_name: Salmonella enterica


asm_submitter: Wenzhou Medical University

organism_name: Bordetella pertussis


asm_submitter: Peking University Third Hospital

organism_name: Acinetobacter baumannii


asm_submitter: Ningbo Municipal Center for Disease Control and Prevention

organism_name: Legionella pneumophila


asm_submitter: College of Life Sciences, Sichuan University

organism_name: Escherichia coli


asm_submitter: Memorial University of Newfoundland

organism_name: Francisella noatunensis subsp. noatunensis


asm_submitter: University of Sao Paulo - Faculty of Pharmacy

organism_name: Klebsiella quasipneumoniae subsp. similipneumoniae


annotation_name: Annotation submitted by Guwahati University

annotation_provider: Guwahati University

asm_submitter: Guwahati University

organism_name: Bacillus cereus


asm_submitter: Northeast Agricultural University

organism_name: Cellulomonas sp. NEAU-ZC6


asm_submitter: Kyoto University Graduate School of Medicine

organism_name: Aeromonas caviae


organism_name: Aeromonas dhakensis


organism_name: Chryseobacterium culicis


organism_name: Chryseobacterium cucumeris


organism_name: Aeromonas hydrophila


organism_name: Aeromonas veronii


organism_name: Chryseobacterium sp. FR054


organism_name: Chryseobacterium sp. FR048


organism_name: Chryseobacterium indologenes


organism_name: Chryseobacterium arthrosphaerae


organism_name: Chryseobacterium cupriresistens


asm_submitter: Public Health England

organism_name: Campylobacter jejuni


asm_submitter: Health Protection Agency

organism_name: Listeria monocytogenes


asm_submitter: National Center for Biotechnology Information

organism_name: Enterococcus faecium


organism_name: Campylobacter coli


asm_submitter: NSW Department of Primary Industries

organism_name: Xanthomonas citri pv. citri


infraspecific_name: strain=ATCC 49118


asm_submitter: Jinan University

organism_name: Planctomycetes bacterium ske30


asm_submitter: Konkuk University

organism_name: Bacteroidales bacterium C853


organism_name: Alphaproteobacteria bacterium ske8


asm_submitter: USDA Animal Plant Health Inspection Service-National Veterinary Services Laboratories

organism_name: Taylorella asinigenitalis


asm_submitter: Zhongkai University of Agriculture and Engineering

organism_name: Lactiplantibacillus pentosus


asm_submitter: Rutgers University

organism_name: Desulfoluna sp. CLI2B


asm_submitter: University of North Carolina at Charlotte

organism_name: Mycetohabitans endofungorum


asm_submitter: Northern Illinois University

organism_name: Synechococcales cyanobacterium MV0715


organism_name: Xanthomonas citri pv. glycines


organism_name: Synechococcales cyanobacterium MV1320


asm_submitter: CDC

organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Kiambu


asm_submitter: Rajiv Gandhi Centre for Biotechnology

organism_name: Helicobacter pylori


asm_submitter: Hallam Lab

infraspecific_name: strain=TISTR 8404

organism_name: Anabaena sp. TISTR 8404


organism_name: Shigella sonnei


asm_submitter: South China Agricultural University

organism_name: Avibacterium paragallinarum


asm_submitter: St Aloysius (Deemed to be University) Mangaluru

organism_name: Erythrobacter sp. RANMB8


organism_name: Streptococcus pyogenes


asm_submitter: FACEN-UNA (Facultad de Ciencias Exactas y Naturales, Universidad Nacional de Asuncion)

organism_name: Pasteurella multocida


asm_submitter: Centers for Disease Control and Prevention

organism_name: Staphylococcus aureus


organism_name: Streptococcus agalactiae


asm_submitter: Cornell University

excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

isolate: RACSSSEBPR

organism_name: Methylobacter sp. RACSSSEBPR


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Klebsiella pneumoniae


asm_submitter: Peking University

organism_name: Methylomonas sp. Uni0011


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


organism_name: Campylobacter jejuni


organism_name: Synechococcales cyanobacterium MV0605


asm_submitter: NSW Department of Primary Industries

organism_name: Xanthomonas citri pv. glycines


organism_name: Acinetobacter baumannii


organism_name: Xanthomonas citri pv. malvacearum


asm_submitter: SFB-TR 84 “Innate Immunity of the Lung: Mechanisms of Pathogen Attack and Host Defence in Pneumonia“

organism_name: Ligilactobacillus murinus


asm_submitter: Southern University of Science and Technology

organism_name: Neisseria subflava


asm_submitter: Carl von Ossietzky University Oldenburg

organism_name: Proteus mirabilis


organism_name: Shigella sonnei


organism_name: Escherichia coli


infraspecific_name: strain=Mock-cell


asm_submitter: National Center for Biotechnology Information

organism_name: Streptococcus pyogenes


infraspecific_name: strain=Isolate 3


infraspecific_name: strain=Isolate 4


asm_submitter: Jinan University

organism_name: Hyphomonas sp. ske169


organism_name: Klebsiella variicola


organism_name: Campylobacter upsaliensis


organism_name: Campylobacter coli


organism_name: Citrobacter farmeri


organism_name: Klebsiella pneumoniae


organism_name: Citrobacter freundii


asm_submitter: FDA-CVM

organism_name: Vibrio cholerae


organism_name: Clostridioides difficile


organism_name: Listeria monocytogenes


organism_name: Yersinia enterocolitica


asm_submitter: CDC

organism_name: Vibrio parahaemolyticus


organism_name: Vibrio metschnikovii


organism_name: Shigella flexneri


organism_name: Enterobacter hormaechei


organism_name: Acinetobacter baumannii


organism_name: Shigella sonnei


organism_name: Klebsiella planticola


organism_name: Escherichia coli


isolate: ECDC 0432


isolate: ECDC 0431


isolate: ECDC 0442


isolate: ECDC 0434


isolate: ECDC 0445


isolate: ECDC 0463


isolate: ECDC 0430


asm_submitter: KyungHee University

organism_name: Heyndrickxia coagulans


asm_submitter: Institut Ruder Boskovic

excluded_from_refseq: derived from metagenome

organism_name: Roseovarius sp.


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; many frameshifted proteins

organism_name: Marivita cryptomonadis


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Pseudosulfitobacter pseudonitzschiae


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Balneolaceae bacterium


organism_name: Marinobacter goseongensis


asm_submitter: EMAR Fiji

organism_name: Stenotrophomonas rhizophila


organism_name: Marinobacter adhaerens


organism_name: Stenotrophomonas hibiscicola


organism_name: Stenotrophomonas maltophilia


organism_name: Stenotrophomonas muris


excluded_from_refseq: contaminated; unverified source organism; from large multi-isolate project


organism_name: Stenotrophomonas indicatrix


organism_name: Stenotrophomonas chelatiphaga


organism_name: Stenotrophomonas sp. STEN063


organism_name: Stenotrophomonas sp. STEN054


asm_submitter: Agriculture and Agri-Food Canada

organism_name: Mesomycoplasma bovoculi


organism_name: Moraxella bovoculi


organism_name: Weeksellaceae bacterium


organism_name: Capnocytophaga sp.


organism_name: Lentibacillus daqui


organism_name: Mesomycoplasma sp.


organism_name: Mannheimia sp.


organism_name: Neisseriaceae bacterium


organism_name: Malacoplasma sp.


organism_name: Escherichia coli


organism_name: Moraxella bovis


isolate: ECDC 0456

organism_name: Acinetobacter baumannii


organism_name: Suttonella sp.


isolate: ECDC 0443


organism_name: Cardiobacteriaceae bacterium


isolate: ECDC 0440


organism_name: Helcococcus sp.


organism_name: Cutibacterium acnes


organism_name: Aerococcaceae bacterium


organism_name: Mesomycoplasma bovoculi


organism_name: Mannheimia pernigra


organism_name: Pasteurellaceae bacterium


organism_name: Desemzia incerta


excluded_from_refseq: derived from metagenome; fragmented assembly


organism_name: Streptococcus ruminantium


organism_name: Mycoplasmopsis bovis


organism_name: Globicatella sp.


organism_name: Lactococcus lactis


organism_name: Cardiobacteriales bacterium


organism_name: Lentilactobacillus buchneri


organism_name: Heyndrickxia faecalis


organism_name: Bacillus licheniformis


organism_name: Streptococcus pluranimalium


organism_name: Bacillus safensis


organism_name: Moraxella bovoculi


organism_name: Lactiplantibacillus plantarum


organism_name: Bacillus subtilis


organism_name: Levilactobacillus brevis


organism_name: Weissella paramesenteroides


organism_name: Bacillus pumilus


organism_name: Moraxella bovis


asm_submitter: King Saud University

organism_name: Pseudomonas sp. FA-1


asm_submitter: Georg-August-University Goettingen

infraspecific_name: strain=DSM 17129

organism_name: Thermincola carboxydiphila


asm_submitter: North Carolina State University

isolate: MAG 270

organism_name: Azospira sp.


isolate: MAG 57

organism_name: Chitinophagaceae bacterium


isolate: MAG 309

organism_name: Bacteroidia bacterium


isolate: MAG 14

organism_name: Rhodocyclaceae bacterium


isolate: MAG 010

organism_name: Accumulibacter sp.


isolate: MAG 008

organism_name: Runella sp.


isolate: MAG 34

organism_name: Dermatophilaceae bacterium


isolate: MAG 284

organism_name: Comamonadaceae bacterium


isolate: MAG 133

organism_name: Ferruginibacter sp.


isolate: MAG 313

organism_name: Chondromyces sp.


isolate: MAG 261

organism_name: Dokdonella sp.


isolate: MAG 17

organism_name: Microthrixaceae bacterium


organism_name: Nitrospira sp.


isolate: MAG 013

organism_name: Thauera aminoaromatica


isolate: MAG 40


isolate: MAG 260


isolate: MAG 001

organism_name: Kofleriaceae bacterium


isolate: MAG 005

organism_name: Pseudomonadales bacterium


isolate: MAG 255


isolate: MAG 12

organism_name: Candidatus Accumulibacter propinquus


asm_submitter: Henan University of Technology

organism_name: Burkholderia sp. L-4


isolate: MAG 002

organism_name: Chitinophagaceae bacterium


organism_name: Stenotrophomonas rhizophila


organism_name: Stenotrophomonas maltophilia


excluded_from_refseq: unverified source organism; from large multi-isolate project


organism_name: Stenotrophomonas lactitubi


organism_name: Stenotrophomonas sp. STEN033


asm_submitter: China CDC

organism_name: Psychrobacillus sp. Z16_25


asm_submitter: Inner Mongolia Agricultural University

organism_name: Clostridium perfringens


asm_submitter: Institute of Biology Hebei Academy of Sciences

organism_name: Priestia megaterium


asm_submitter: Hebei Normal University Of Science & Technology

organism_name: Stutzerimonas stutzeri


asm_submitter: Instituto Nacional de Investigaciones Forestales Agricolas y Pecuarias

organism_name: Enterobacter sp. QK-SA4


asm_submitter: Hebei University

organism_name: Bacillus basilensis


organism_name: Paenibacillus sp. CL36


organism_name: Paenibacillus pasadenensis


organism_name: Brevundimonas aurantiaca


organism_name: Paenibacillus sp. G34


asm_submitter: Seoul national university

organism_name: Klebsiella pneumoniae


asm_submitter: Chinese Academy of Sciences

organism_name: Micrococcaceae bacterium CLY09


asm_submitter: Guangxi University

organism_name: Pantoea sp. PA1


asm_submitter: The Hebrew University Of Jerusalem

organism_name: Burkholderia sola


asm_submitter: Boudreau Lab

organism_name: Novosphingobium sp. BL-S-34


organism_name: Novosphingobium sp. BL-S-33


organism_name: Novosphingobium sp. BL-S-32


organism_name: Sphingomonas sp. BL-S-31


asm_submitter: Universidade Federal de Vicosa

organism_name: Stenotrophomonas maltophilia


asm_submitter: CSIR-Indian Institute of Petroleum

organism_name: Laceyella sacchari


asm_submitter: Agriculture and Agri-Food Canada

organism_name: Corynebacterium camporealensis


organism_name: Psychrobacter sanguinis


organism_name: Bifidobacterium mongoliense


organism_name: Corynebacterium sp.


organism_name: Lactobacillus amylovorus


organism_name: Clostridium sp.


organism_name: Lactobacillus johnsonii


organism_name: Methanobrevibacter sp.


organism_name: Limosilactobacillus reuteri


organism_name: Streptococcus hyovaginalis


organism_name: Staphylococcus chromogenes


organism_name: Rothia sp. (in: high G+C Gram-positive bacteria)


organism_name: Bergeyella zoohelcum


organism_name: Sarcina ventriculi


organism_name: Sodaliphilus sp.


organism_name: Micrococcus sp.


organism_name: Eubacteriales bacterium


asm_submitter: Second Institute of Oceanography

organism_name: Vreelandella sp. L-25


organism_name: Acinetobacter sp. L-24


organism_name: Staphylococcus sp. L-20W


organism_name: Marinobacter sp. L-2


organism_name: Galbibacter sp. L-19


organism_name: Vreelandella sp. L-15


organism_name: Paracoccus sp. L-17


organism_name: Qipengyuania sp. L-14Y


organism_name: Jannaschia sp. L-14R


organism_name: Marinobacter sp. L-13


organism_name: Flagellimonas sp. L-11


organism_name: Vreelandella sp. L-1


organism_name: Alterinioella sp. B-7


organism_name: Aliiroseovarius sp. B-4


organism_name: Qipengyuania sp. B-5


organism_name: Flagellimonas sp. B-3


organism_name: Maricaulis sp. B-26


organism_name: Aliiroseovarius sp. B-24


organism_name: Marinobacter sp. B-21


organism_name: Marinobacter sp. B-12


organism_name: Gracilimonas sp. B-17


asm_submitter: USDA/ARS/National Animal Disease Center

organism_name: Mycoplasmopsis bovis


organism_name: Mannheimia haemolytica


asm_submitter: Australian centre for genomic epidemiological Microbiology


organism_name: Pasteurella multocida


asm_submitter: Polytechnic University of Marche Medical School

organism_name: Enterococcus faecalis


organism_name: Enterococcus hirae


organism_name: Enterococcus faecium


asm_submitter: University of Liverpool

organism_name: Bacillus velezensis

relation_to_type_material: assembly from heterotypic synonym type material


organism_name: Pseudomonas simiae


organism_name: Bacillus subtilis


organism_name: Acidovorax radicis N35


asm_submitter: Virginia Tech

organism_name: Cellulosimicrobium cellulans


organism_name: Massilia aurea


asm_submitter: Zhejiang university

organism_name: Lactiplantibacillus plantarum


asm_submitter: Keimyung University

organism_name: Agaribacillus sp. DX54


organism_name: Yoonia sp. KMU-150


asm_submitter: Sinchi Amazonic Institute of Scientific Research

infraspecific_name: strain=COLMIS 204

organism_name: Burkholderia contaminans


organism_name: Litorisediminivivens sp. KMU-197


infraspecific_name: strain=COLMIS 147

organism_name: Pseudomonas paracarnis


asm_submitter: Oklahoma State University

organism_name: Pyxidicoccus sp. M15


asm_submitter: Banaras Hindu University

organism_name: Phormidium nigroviride


asm_submitter: Zhejiang Provincial Peoples Hospital

organism_name: Pseudomonas aeruginosa


asm_submitter: Democritus University of Thrace

organism_name: Streptomyces melanosporofaciens


organism_name: Streptomyces sp. TOM-9


organism_name: Streptomyces sp. TOM-4


organism_name: Streptomyces rubrogriseus


asm_submitter: National Institute of Infectious Diseases

organism_name: Alistipes ihumii


asm_submitter: University of Florence

organism_name: Sinorhizobium meliloti


asm_submitter: Sungkyunkwan University

organism_name: Castellaniella sp. PP-63


asm_submitter: West China Hospital, Sichuan University

organism_name: Mycolicibacterium litorale


asm_submitter: Smart Microbiology Services

organism_name: Pseudomonadota bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Bacillota bacterium


organism_name: Actinomycetota bacterium


organism_name: Bacteroidota bacterium


excluded_from_refseq: derived from metagenome; genome length too small; genus undefined


asm_submitter: Nicolaus Copernicus University

organism_name: Streptomyces sp. NH27


asm_submitter: Qingdao Agricultural Universtiy

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


asm_submitter: Korea National Institute of Health

organism_name: Escherichia coli


asm_submitter: Second Institute of Oceanography

organism_name: Sulfitobacter sp. L-8


organism_name: Paracoccus sp. B-1


organism_name: Roseovarius sp. B-10


organism_name: Methylophaga sp. F-2


organism_name: Methylophaga sp. F-7


infraspecific_name: strain=L-R

organism_name: Cyclobacterium sp. L-R


organism_name: Paracoccus sp. L-6W


organism_name: Marinobacter sp. L-80


organism_name: Zunongwangia sp. L-65


organism_name: Halopseudomonas sp. L-64


organism_name: Qipengyuania sp. L-5Y


organism_name: Halopseudomonas sp. L-58


organism_name: Sphingobium sp. L-44


organism_name: Paracoccus sp. L-5


organism_name: Marinobacter sp. L-46


organism_name: Marinobacter sp. L-42


organism_name: Flagellimonas sp. L-3


asm_submitter: CEITEC VETUNI

organism_name: Citrobacter portucalensis


organism_name: Citrobacter freundii


organism_name: Citrobacter braakii


organism_name: Citrobacter youngae


organism_name: Citrobacter europaeus


excluded_from_refseq: unverified source organism; annotation fails completeness check


organism_name: Citrobacter pasteurii


excluded_from_refseq: contaminated


organism_name: Citrobacter gillenii


asm_submitter: Yunnan Academy of Tobacco Agricultural Sciences

organism_name: Stenotrophomonas sp. 115C5


organism_name: Stenotrophomonas sp. 85A6


organism_name: Stenotrophomonas sp. 86B7


organism_name: Stenotrophomonas sp. 137-E6


organism_name: Stenotrophomonas sp. 124D1


organism_name: Stenotrophomonas sp. 96B8


organism_name: Stenotrophomonas sp. 123D5


organism_name: Stenotrophomonas sp. 113D6


organism_name: Stenotrophomonas sp. 86C4


organism_name: Stenotrophomonas sp. 305A1


organism_name: Stenotrophomonas sp. 22DLJC03


organism_name: Stenotrophomonas sp. 21LCFQ19


organism_name: Stenotrophomonas sp. 22LJNL06-5-1


organism_name: Stenotrophomonas sp. 82F1


organism_name: Stenotrophomonas sp. K-6


organism_name: Stenotrophomonas sp. 132-E2


asm_submitter: ARTS, SCIENCE AND COMMERCE COLLEGE KHOLWAD

organism_name: Calidifontibacillus erzurumensis


organism_name: Escherichia coli


asm_submitter: The University of Queensland

organism_name: Pasteurella multocida


asm_submitter: Centro de Investigacion y de Estudios Avanzados del IPN

infraspecific_name: strain=ATCC 39365

organism_name: Nonomuraea sp. ATCC-39365


asm_submitter: National Center for Genetic Engineering and Biotechnology

infraspecific_name: strain=TBRC 4237

organism_name: Actinoplanes siamensis


asm_submitter: The Second Affliated Hospital Zhejiang University School of Medicine

excluded_from_refseq: annotation fails completeness check

organism_name: Enterococcus faecalis


organism_name: Enterococcus faecium


asm_submitter: Sun Yat-Sen University

infraspecific_name: strain=LMG 26949

organism_name: Parviterribacter multiflagellatus


infraspecific_name: strain=KCTC 19427

organism_name: Patulibacter ginsengiterrae


infraspecific_name: strain=LMG 26950

organism_name: Parviterribacter kavangonensis


asm_submitter: Taizhou Municipal Hospital

organism_name: Aeromonas caviae


asm_submitter: The Second Affiliated Hospital Zhejiang University of Medicine


asm_submitter: Mediogen

organism_name: Limosilactobacillus reuteri


asm_submitter: SuZhou PrecisionBio Co., Ltd

organism_name: Ligilactobacillus salivarius


organism_name: Methylophaga sp. F7


asm_submitter: University of Mississippi Medical Center

organism_name: Staphylococcus aureus


asm_submitter: Universidad Peruana Cayetano Heredia

organism_name: Bartonella bacilliformis


asm_submitter: Federal University Parana

organism_name: Methylobacterium oryzae


asm_submitter: Qingdao Agricultural University

organism_name: Klebsiella variicola


organism_name: Klebsiella pneumoniae


organism_name: Klebsiella pasteurii


asm_submitter: National Center for Biotechnology Information

excluded_from_refseq: from large multi-isolate project

organism_name: Yersinia enterocolitica


isolate: ECDC 0454

organism_name: Acinetobacter baumannii


isolate: ECDC 0429


isolate: ECDC 0458


asm_submitter: Qingdao University

organism_name: Streptomyces sp. LS-1


asm_submitter: University of Hawaii at Manoa

organism_name: Xanthomonas euvesicatoria


asm_submitter: Southern University of Science and Technology

organism_name: Cyclobacterium sp. SOCE241


asm_submitter: Broad Institute

organism_name: Enterococcus sp. DIV2314


asm_submitter: Minda Hospital of Hubei Minzu University


asm_submitter: London School of Hygiene & Tropical Medicine

organism_name: Campylobacter coli


asm_submitter: University of North Carolina at Charlotte

organism_name: Mycetohabitans rhizoxinica


asm_submitter: North Carolina State University

organism_name: Pseudomonas amygdali pv. amygdali


organism_name: Pseudomonas amygdali pv. eriobotryae


organism_name: Pseudomonas amygdali pv. hibisci


organism_name: Pseudomonas amygdali pv. mellea


organism_name: Pseudomonas amygdali pv. mori


organism_name: Pseudomonas savastanoi pv. phaseolicola


organism_name: Pseudomonas amygdali pv. photiniae


asm_submitter: NSW Department of Primary Industries

organism_name: Xanthomonas citri pv. citri


organism_name: Pseudomonas amygdali pv. ulmi


organism_name: Xanthomonas citri pv. aurantifolii


organism_name: Xanthomonas citri pv. fuscans


organism_name: Xanthomonas citri pv. glycines


asm_submitter: Shihezi University

organism_name: Escherichia coli


organism_name: Variovorax sp. TLI9-5A


organism_name: Dyella marensis


organism_name: Achromobacter animicus


organism_name: Bradyrhizobium centrosematis


organism_name: Mitsuaria sp. MSU3D


organism_name: Brevibacillus agri


organism_name: Paenarthrobacter histidinolovorans


organism_name: Massilia cellulosiltytica


organism_name: Chryseobacterium sp. KU4A


organism_name: Monashia sp. HAY1-11D


organism_name: Mesorhizobium sp. HAY1-8B


organism_name: Flavobacterium johnsoniae


organism_name: Cellulomonas sp. KU4C


organism_name: Microbacterium sp. KU4F


isolate: ECDC 0439

organism_name: Acinetobacter baumannii


asm_submitter: CDC


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Enterobacter hormaechei


organism_name: Clostridioides difficile


organism_name: Mycetohabitans rhizoxinica


asm_submitter: University of Chicago

organism_name: Marinomonas arenicola


organism_name: Xanthomonas citri pv. citri


organism_name: Xanthomonas citri pv. glycines


asm_submitter: ATCC

organism_name: Lactobacillus johnsonii


asm_submitter: Rajiv Gandhi Centre for Biotechnology

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Helicobacter pylori


asm_submitter: USDA FSIS

organism_name: Campylobacter coli


organism_name: Campylobacter jejuni


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Muenchen


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Salmonella enterica subsp. enterica serovar Infantis


asm_submitter: Hallam Lab

organism_name: Porphyrobacter sp. THAI-01a


asm_submitter: Centers for Disease Control and Prevention


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Hadar


organism_name: Salmonella enterica subsp. enterica serovar 4,[5],12:i:-


asm_submitter: National Center for Biotechnology Information

organism_name: Streptococcus agalactiae


organism_name: Salmonella enterica subsp. enterica serovar Worthington


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Streptococcus pyogenes


asm_submitter: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention

organism_name: Listeria monocytogenes


asm_submitter: The University of Hong Kong

excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Mediterraneibacter torques


organism_name: Agathobacter rectalis


isolate: ECDC 0450

organism_name: Acinetobacter baumannii


organism_name: Yersinia enterocolitica


organism_name: Vibrio cholerae


isolate: ECDC 0461


isolate: ECDC 0470


isolate: ECDC 0455


isolate: ECDC 0435


excluded_from_refseq: contaminated; from large multi-isolate project


isolate: ECDC 0462


organism_name: Salmonella enterica


isolate: ECDC 0460


isolate: ECDC 0457


isolate: ECDC 0444


organism_name: Campylobacter jejuni


isolate: ECDC 0428


organism_name: Enterobacter hormaechei


asm_submitter: FDA-CVM

organism_name: Aeromonas salmonicida


isolate: WGS of M66287

organism_name: Haemophilus influenzae


isolate: Acipenser sinensis in RAS

organism_name: Aeromonas veronii


isolate: ECDC 0433


organism_name: Providencia stuartii


isolate: Spleen of diseased frog


organism_name: Klebsiella pneumoniae


organism_name: Citrobacter koseri


organism_name: Serratia marcescens


organism_name: Enterobacter roggenkampii


organism_name: Pseudomonas aeruginosa


organism_name: Salmonella enterica subsp. enterica serovar Kentucky


asm_submitter: FDA/CFSAN

organism_name: Listeria monocytogenes


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Vibrio cholerae


organism_name: Acinetobacter baumannii


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Mbandaka


organism_name: Shigella flexneri


organism_name: Clostridioides difficile


organism_name: Aeromonas salmonicida


organism_name: Campylobacter jejuni


organism_name: Proteus mirabilis


organism_name: Klebsiella pneumoniae


organism_name: Campylobacter coli


isolate: ECDC 0423


organism_name: Vescimonas sp.


asm_submitter: Ministerio da Agricultura e Pecuaria

organism_name: Brucella abortus


organism_name: Alistipes finegoldii


organism_name: Bacteroidaceae bacterium


organism_name: Ruminococcus sp.


organism_name: Oscillospiraceae bacterium


organism_name: Barnesiella intestinihominis


organism_name: Faecalibacterium duncaniae


organism_name: Acutalibacteraceae bacterium


organism_name: [Eubacterium] siraeum


organism_name: Bacteroides cellulosilyticus


organism_name: Candidatus Apopatocola sp.


organism_name: Wujia sp.


organism_name: Parabacteroides distasonis


organism_name: Eubacteriales bacterium


organism_name: Candidatus Fimenecus sp.


organism_name: Prevotella sp.


organism_name: Waltera acetigignens


organism_name: Escherichia coli


organism_name: Candidatus Spyradocola sp.


organism_name: Alistipes ihumii


organism_name: Negativibacillus sp.


organism_name: Segatella copri


organism_name: Dialister invisus


organism_name: Candidatus Ventricola sp.


organism_name: Bilophila wadsworthia


organism_name: Acutalibacteraceae bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Aristaeellaceae bacterium


organism_name: Roseburia hominis


organism_name: Alistipes dispar


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Paraprevotella clara


organism_name: Hominicoprocola fusiformis


organism_name: Gemmiger qucibialis


organism_name: Dysosmobacter welbionis


excluded_from_refseq: derived from metagenome

organism_name: Megasphaera massiliensis


organism_name: Faecalibacterium longum


organism_name: Vescimonas sp.


organism_name: Candidatus Limiplasma sp.


organism_name: Agathobacter rectalis


organism_name: Alistipes senegalensis


organism_name: Alistipes shahii


organism_name: Angelakisella sp.


organism_name: Desulfovibrio sp.


organism_name: Alloprevotella sp.


organism_name: Vescimonas coprocola


organism_name: Alistipes indistinctus


organism_name: Bacteroides uniformis


organism_name: Prevotella sp.


organism_name: Slackia isoflavoniconvertens


organism_name: Oscillospiraceae bacterium


organism_name: Aristaeellaceae bacterium


organism_name: Coprococcus aceti


organism_name: Eubacterium sp.


organism_name: Bifidobacterium adolescentis


organism_name: Megasphaera sp.


organism_name: Succiniclasticum sp.


organism_name: Flavonifractor plautii


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Vescimonas sp.


organism_name: Ruminococcoides sp.


organism_name: Bacilli bacterium


organism_name: Odoribacter splanchnicus


organism_name: Parabacteroides distasonis


organism_name: Faecalibacterium taiwanense


organism_name: Desulfovibrio legallii


organism_name: Dialister invisus


organism_name: Methanobrevibacter smithii


organism_name: Candidatus Fimenecus sp.


organism_name: Alistipes putredinis


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Segatella copri


organism_name: Agathobacter rectalis


organism_name: Candidatus Alistipes avistercoris


organism_name: Akkermansia massiliensis


organism_name: Faecalibacterium longum


organism_name: Sutterella sp.


organism_name: Christensenellales bacterium


organism_name: Parabacteroides merdae


organism_name: Phocaeicola plebeius


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Oscillospiraceae bacterium


organism_name: Candidatus Ventricola sp.


organism_name: Gemmiger qucibialis


organism_name: Hominicoprocola sp.


organism_name: Phascolarctobacterium faecium


organism_name: Alistipes ihumii


organism_name: Faecousia sp.


organism_name: Holdemanella hominis


organism_name: Bacilli bacterium


organism_name: Negativibacillus sp.


organism_name: Desulfovibrio piger


organism_name: Alistipes onderdonkii


organism_name: Barnesiella intestinihominis


organism_name: Hominimerdicola aceti


organism_name: Limosilactobacillus portuensis


organism_name: Anaerotardibacter sp.


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome

organism_name: Vescimonas sp.


organism_name: Ruthenibacterium lactatiformans


organism_name: Prevotella sp.


organism_name: Alistipes shahii


organism_name: Faecousia intestinalis


organism_name: Akkermansia muciniphila


organism_name: Sutterella wadsworthensis


organism_name: Faecalibacterium longum


organism_name: Oscillospiraceae bacterium


organism_name: Ruminococcoides intestinale


organism_name: Brotocaccenecus cirricatena


organism_name: Gemmiger formicilis


organism_name: Bacteroides caccae


organism_name: Aristaeellaceae bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small; genus undefined

organism_name: [Eubacterium] siraeum


organism_name: Ruminococcus callidus


organism_name: Enterocloster bolteae


organism_name: Alistipes finegoldii


organism_name: Acutalibacteraceae bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Lachnospira sp.


organism_name: Phascolarctobacterium succinatutens


organism_name: Bacteroides uniformis


organism_name: Prevotella sp.


organism_name: Segatella copri


organism_name: Parabacteroides distasonis


organism_name: Faecalibacterium sp.


organism_name: Gemmiger qucibialis


organism_name: Flavonifractor plautii


organism_name: Alistipes inops


organism_name: Candidatus Limisoma sp.


organism_name: Sutterella wadsworthensis


organism_name: Candidatus Fimivicinus sp.


organism_name: Faecalibacterium prausnitzii


organism_name: Vescimonas coprocola


organism_name: Allofournierella massiliensis


organism_name: Candidatus Scatocola faecipullorum


organism_name: Bifidobacterium adolescentis


organism_name: Escherichia coli


organism_name: Agathobacter rectalis


organism_name: Anaerotruncus colihominis


organism_name: Hominicoprocola sp.


organism_name: Alistipes finegoldii


organism_name: Parabacteroides merdae


organism_name: Dialister succinatiphilus


organism_name: Bilophila wadsworthia


organism_name: [Eubacterium] siraeum


organism_name: Phocaeicola vulgatus


organism_name: Alistipes onderdonkii


organism_name: Akkermansia massiliensis


organism_name: Bacteroides uniformis


organism_name: Anaerostipes hadrus


organism_name: Megasphaera massiliensis


organism_name: Parabacteroides distasonis


organism_name: Acidaminococcus intestini


organism_name: Phascolarctobacterium faecium


organism_name: Flavonifractor plautii


organism_name: Parasutterella excrementihominis


organism_name: Agathobacter rectalis


organism_name: Akkermansia muciniphila


organism_name: Candidatus Metalachnospira sp.


organism_name: Oscillospiraceae bacterium


organism_name: Monoglobus pectinilyticus


organism_name: Segatella copri


organism_name: Dialister invisus


organism_name: Ruminococcoides intestinale


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Eubacteriales bacterium


organism_name: Vescimonas sp.


organism_name: Negativibacillus sp.


organism_name: Brotaphodocola sp.


organism_name: Alistipes inops


organism_name: Hominicoprocola fusiformis


organism_name: Candidatus Scatocola faecigallinarum


organism_name: Escherichia coli


organism_name: Collinsella sp.


organism_name: Faecalibacterium longum


organism_name: Bacteroides uniformis


organism_name: Alistipes ihumii


organism_name: Candidatus Fimenecus sp.


organism_name: Dysosmobacter welbionis


organism_name: Alistipes finegoldii


organism_name: [Eubacterium] siraeum


organism_name: Ruthenibacterium lactatiformans


organism_name: Parabacteroides merdae


organism_name: Roseburia hominis


organism_name: Vescimonas sp.


organism_name: Candidatus Merdicola sp.


organism_name: Gemmiger qucibialis


organism_name: Waltera acetigignens


organism_name: Lachnospiraceae bacterium


organism_name: Klebsiella variicola


organism_name: Streptococcus parasanguinis


organism_name: Gallintestinimicrobium propionicum


organism_name: Christensenellales bacterium


organism_name: Brotocaccenecus cirricatena


organism_name: Acutalibacteraceae bacterium


organism_name: Dialister invisus


organism_name: Faecalibacterium duncaniae


organism_name: Bacteroides fragilis


organism_name: Barnesiella intestinihominis


organism_name: Bacteroides uniformis


organism_name: Streptococcus salivarius


organism_name: Hominicoprocola sp.


organism_name: Bilophila wadsworthia


organism_name: Oscillospiraceae bacterium


organism_name: Escherichia coli


organism_name: Parasutterella excrementihominis


organism_name: Alistipes putredinis


organism_name: Faecalibacterium longum


organism_name: Parabacteroides distasonis


organism_name: Vescimonas sp.


organism_name: Ruminococcoides intestinale


organism_name: Phocaeicola vulgatus


organism_name: Hominimerdicola sp.


organism_name: Odoribacter splanchnicus


organism_name: Alistipes shahii


organism_name: Candidatus Scatosoma sp.


organism_name: Lachnospiraceae bacterium


organism_name: Segatella copri


organism_name: Akkermansia muciniphila


organism_name: Waltera sp.


organism_name: Vescimonas coprocola


organism_name: Acidaminococcus fermentans


organism_name: Butyribacter sp.


organism_name: Angelakisella sp.


organism_name: Candidatus Fimenecus sp.


organism_name: Alistipes onderdonkii


organism_name: Bilophila wadsworthia


organism_name: Bacteroides stercoris


organism_name: Gemmiger qucibialis


organism_name: Parabacteroides merdae


organism_name: Alistipes putredinis


organism_name: Oscillospiraceae bacterium


organism_name: Eubacteriales bacterium


organism_name: Vescimonas sp.


organism_name: Ruminococcus callidus


organism_name: Victivallis lenta


organism_name: Alistipes shahii


organism_name: Dialister hominis


organism_name: Sutterella wadsworthensis


organism_name: Parabacteroides distasonis


organism_name: Prevotella sp.


organism_name: Barnesiella intestinihominis


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; genome length too small

organism_name: Coprococcus aceti


organism_name: Faecalibacterium tardum


organism_name: Ruminococcoides intestinale


organism_name: Acutalibacteraceae bacterium


organism_name: Bacteroides uniformis


organism_name: Phocaeicola vulgatus


organism_name: Bacteroides clarus


organism_name: Lachnospira sp.


organism_name: Candidatus Bilophila faecipullorum


organism_name: Acidaminococcus intestini


organism_name: Parabacteroides sp.


organism_name: Enterocloster sp.


organism_name: Dialister hominis


organism_name: Dongibacter bovis


organism_name: Bacteroides thetaiotaomicron


organism_name: Parabacteroides distasonis


organism_name: Alistipes putredinis


organism_name: Enterocloster clostridioformis


organism_name: Bilophila wadsworthia


organism_name: Alistipes onderdonkii


organism_name: Collinsella aerofaciens


organism_name: Vescimonas coprocola


organism_name: Acutalibacteraceae bacterium


organism_name: Phocaeicola vulgatus


organism_name: Lachnospiraceae bacterium


organism_name: Parabacteroides merdae


organism_name: Faecalibacterium intestinale


organism_name: Bacteroides cellulosilyticus


organism_name: Phascolarctobacterium faecium


organism_name: Bacteroides ovatus


organism_name: Bacteroides uniformis


organism_name: Escherichia coli


organism_name: Fusicatenibacter saccharivorans


organism_name: Dysosmobacter welbionis


organism_name: Alistipes hominis


organism_name: Waltera acetigignens


organism_name: Gemmiger formicilis


organism_name: Alistipes shahii


organism_name: Bacteroides thetaiotaomicron


organism_name: Bilophila wadsworthia


organism_name: Intestinimonas massiliensis (ex Afouda et al. 2020)


organism_name: Coprococcus intestinihominis


organism_name: Roseburia intestinalis


organism_name: Negativibacillus sp.


organism_name: Gemmiger qucibialis


organism_name: Bifidobacterium catenulatum


organism_name: Sutterella wadsworthensis


organism_name: Desulfovibrio sp.


organism_name: Ructibacterium sp.


organism_name: Anaerotignum faecicola


organism_name: Bacteroides uniformis


organism_name: Bifidobacterium longum


organism_name: Alistipes communis


organism_name: Dysosmobacter welbionis


organism_name: Ruminococcoides intestinale


organism_name: Candidatus Metalachnospira sp.


organism_name: Dialister invisus


organism_name: Parabacteroides merdae


organism_name: Alistipes shahii


organism_name: Alistipes ihumii


organism_name: Barnesiella intestinihominis


organism_name: Aristaeellaceae bacterium


organism_name: Alistipes finegoldii


organism_name: Candidatus Fimenecus sp.


organism_name: Phocaeicola vulgatus


organism_name: Lawsonibacter sp.


organism_name: Acutalibacteraceae bacterium


organism_name: Flavonifractor plautii


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Hominimerdicola sp.


organism_name: Alistipes onderdonkii


organism_name: Alistipes inops


organism_name: Eubacterium sp.


organism_name: Collinsella tanakaei


organism_name: Bacteroides stercoris


organism_name: Vescimonas coprocola


organism_name: Bifidobacterium adolescentis


organism_name: Bacteroides sp.


organism_name: Pilosibacter fragilis


organism_name: Candidatus Avimicrobium sp.


organism_name: Hominilimicola fabiformis


organism_name: Collinsella sp.


organism_name: Gemmiger formicilis


organism_name: Sutterella sp.


organism_name: Enterocloster sp.


organism_name: Bacteroides uniformis


organism_name: Limosilactobacillus portuensis


organism_name: Alistipes putredinis


organism_name: Mediterraneibacter gnavus


organism_name: Escherichia coli


organism_name: Streptococcus salivarius


organism_name: Bilophila wadsworthia


organism_name: Lachnospira sp.


organism_name: Prevotella sp.


organism_name: Alistipes shahii


organism_name: Faecalibacterium longum


organism_name: Dialister invisus


organism_name: Agathobacter rectalis


organism_name: Eubacterium sp.


organism_name: Barnesiella intestinihominis


organism_name: Parabacteroides distasonis


organism_name: Flavonifractor plautii


organism_name: Ruminococcoides intestinale


organism_name: Phocaeicola massiliensis


organism_name: Odoribacter splanchnicus


organism_name: Sutterella wadsworthensis


organism_name: Bacteroides stercoris


asm_submitter: South China University of Technology

organism_name: Gordonia alkanivorans


organism_name: Desulfovibrio sp.


organism_name: Escherichia coli


organism_name: Alistipes putredinis


organism_name: Hungatella effluvii


organism_name: Coprobacter sp.


organism_name: Anaerotignum faecicola


organism_name: Bacteroides uniformis


organism_name: Bacteroides caccae


organism_name: Akkermansia muciniphila


organism_name: Angelakisella sp.


organism_name: Ruthenibacterium lactatiformans


organism_name: Brucella abortus


isolate: SPN

organism_name: Streptococcus pneumoniae


asm_submitter: Public Health England

organism_name: Yersinia enterocolitica


asm_submitter: Health Protection Agency

organism_name: Shigella flexneri


asm_submitter: Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion

organism_name: Enterobacter hormaechei


asm_submitter: Harbin Institute of Technology(Weihai)

organism_name: Psychrobacter sp. ANT206


asm_submitter: Chinese Academy of Agriculture Science

organism_name: Microbacterium testaceum


asm_submitter: Southern University of Science and Technology

organism_name: Neisseria subflava


infraspecific_name: strain=Mock


asm_submitter: University of North Carolina at Charlotte

organism_name: Mycetohabitans rhizoxinica


asm_submitter: Kunsan National University

organism_name: Methyloparacoccus sp. NF-16


asm_submitter: UNIVERSITY OF HAWAII AT MANOA

organism_name: Pectobacterium brasiliense


asm_submitter: Chung-Ang University

organism_name: Staphylococcus aureus


organism_name: Mammaliicoccus sciuri


asm_submitter: University of Georgia

organism_name: Sphingobacterium sp. UGAL515B


asm_submitter: University of Dhaka

organism_name: Providencia stuartii


asm_submitter: National Center for Biotechnology Information

isolate: ECDC 0465

organism_name: Acinetobacter baumannii