annotation_name: Annotation submitted by SC

annotation_provider: SC

asm_submitter: SC

assembly_level: Contig

assembly_type: haploid

excluded_from_refseq: annotation fails completeness check

genome_rep: Full

group: bacteria

organism_name: Escherichia coli

paired_asm_comp: identical

release_type: Major

version_status: latest


excluded_from_refseq: annotation fails completeness check; many frameshifted proteins


organism_name: Citrobacter braakii


excluded_from_refseq: many frameshifted proteins


excluded_from_refseq: genus undefined; not used as type

organism_name: [Eubacterium] infirmum


organism_name: Mobiluncus mulieris

relation_to_type_material: assembly from heterotypic synonym type material


organism_name: Slackia exigua

refseq_category: reference genome

relation_to_type_material: assembly from type material


organism_name: Flavobacterium hibernum


organism_name: Exiguobacterium aurantiacum


organism_name: Mobiluncus curtisii


organism_name: Escherichia fergusonii


organism_name: Legionella bozemanae


organism_name: [Flavobacterium] thermophilum


organism_name: Grimontia hollisae


organism_name: Haemophilus parahaemolyticus HK385


organism_name: Fluoribacter dumoffii


organism_name: Avibacterium paragallinarum


organism_name: Canicola haemoglobinophilus


organism_name: Gallibacterium anatis


organism_name: Haemophilus aegyptius


organism_name: Fusobacterium necrogenes


organism_name: Haemophilus influenzae


organism_name: Fusobacterium vincentii


organism_name: Gordonia bronchialis


organism_name: Helicobacter canadensis


organism_name: Helicobacter pylori


infraspecific_name: strain=NCTC 7857

organism_name: Haemophilus parainfluenzae ATCC 33392


organism_name: Haemophilus pittmaniae


organism_name: Haemophilus parahaemolyticus


organism_name: Helicobacter muridarum


organism_name: Helicobacter fennelliae


organism_name: Glaesserella parasuis


excluded_from_refseq: contaminated; not used as type

organism_name: Fusobacterium naviforme


organism_name: Helicobacter pullorum


organism_name: Fluoribacter gormanii


organism_name: Pseudescherichia vulneris


organism_name: Canicola haemoglobinophilus


organism_name: Haemophilus parainfluenzae


organism_name: Ewingella americana


organism_name: Hafnia alvei


organism_name: Helicobacter cinaedi


organism_name: Haemophilus paraphrohaemolyticus


excluded_from_refseq: genome length too large; not used as type

organism_name: Fusobacterium necrophorum subsp. necrophorum


organism_name: Helicobacter mustelae


organism_name: Helicobacter canis


organism_name: Janthinobacterium lividum


organism_name: Kingella kingae


organism_name: Klebsiella oxytoca


organism_name: Kingella potus


organism_name: Klebsiella pneumoniae


organism_name: Iodobacter fluviatilis


organism_name: Klebsiella quasipneumoniae


organism_name: Klebsiella ornithinolytica


organism_name: Helicobacter pylori


organism_name: Klebsiella michiganensis


organism_name: Klebsiella grimontii


organism_name: Kingella denitrificans


organism_name: Klebsiella variicola


organism_name: Citrobacter koseri


organism_name: Klebsiella pneumoniae subsp. ozaenae


organism_name: Klebsiella pneumoniae subsp. pneumoniae


organism_name: Klebsiella pneumoniae subsp. rhinoscleromatis


organism_name: Kluyvera ascorbata


organism_name: Kluyvera cryocrescens


organism_name: Kurthia zopfii


organism_name: Kocuria rosea


organism_name: Klebsiella pneumoniae


organism_name: Lactobacillus gasseri


organism_name: Legionella geestiana


organism_name: Legionella donaldsonii


organism_name: Legionella beliardensis


organism_name: Kytococcus sedentarius


organism_name: Legionella cincinnatiensis


organism_name: Leclercia adecarboxylata


organism_name: Legionella feeleii


excluded_from_refseq: unverified source organism; genome length too large

organism_name: Lactobacillus acidophilus


organism_name: Legionella birminghamensis


excluded_from_refseq: genome length too large; many frameshifted proteins; not used as type

organism_name: Rothia kristinae


organism_name: Legionella gratiana


organism_name: Legionella hackeliae


organism_name: Lactiplantibacillus plantarum subsp. plantarum


organism_name: Legionella israelensis


organism_name: Levilactobacillus brevis


organism_name: Klebsiella pneumoniae


organism_name: Klebsiella michiganensis


organism_name: Legionella pneumophila


organism_name: Legionella quateirensis


organism_name: Legionella moravica


organism_name: Legionella londiniensis


organism_name: Legionella steigerwaltii


organism_name: Vibrio anguillarum


organism_name: Legionella taurinensis


organism_name: Mannheimia haemolytica


organism_name: Listeria monocytogenes


organism_name: Legionella wadsworthii


organism_name: Micrococcus luteus


organism_name: Leuconostoc mesenteroides


organism_name: Listeria fleischmannii subsp. coloradonensis


organism_name: Listeria innocua


infraspecific_name: strain=NCTC 10815

organism_name: Listeria grayi


organism_name: Macrococcoides caseolyticum


organism_name: Legionella worsleiensis


organism_name: Listeria booriae


infraspecific_name: strain=NCTC 4103

organism_name: Moraxella veridica


organism_name: Mycolicibacterium aichiense


organism_name: Moraxella catarrhalis


organism_name: Moraxella ovis


organism_name: Faucicola osloensis


organism_name: Morganella morganii


organism_name: Moraxella caviae


organism_name: Moraxella lacunata


organism_name: Mobiluncus mulieris


organism_name: Mycobacteroides abscessus


organism_name: Mobiluncus holmesii


organism_name: Moraxella bovis


organism_name: Moraxella caprae


organism_name: Mannheimia haemolytica


organism_name: Faucicola atlantae


organism_name: Mobiluncus curtisii subsp. curtisii


organism_name: Moraxella equi


organism_name: Megamonas hypermegale


organism_name: Mycolicibacterium tokaiense


organism_name: Listeria fleischmannii subsp. fleischmannii


organism_name: Mycobacterium xenopi


organism_name: Mycolicibacterium chubuense


organism_name: Mycolicibacterium smegmatis


organism_name: Mycolicibacterium phlei


organism_name: Neisseria dentiae


organism_name: Myroides odoratus


organism_name: Myroides odoratimimus


organism_name: Neisseria gonorrhoeae


organism_name: Neisseria flavescens


organism_name: Bergeriella denitrificans


organism_name: Neisseria elongata


excluded_from_refseq: unverified source organism

organism_name: Neisseria meningitidis


organism_name: Mycolicibacterium fortuitum


organism_name: Mycolicibacterium gilvum


organism_name: Neisseria lactamica


organism_name: Mycolicibacterium senegalense


organism_name: Odoribacter splanchnicus


organism_name: Neisseria zoodegmatis


organism_name: Brucella intermedia


organism_name: Brucella anthropi


organism_name: Oligella urethralis


organism_name: Nocardia brasiliensis


organism_name: Oligella ureolytica


organism_name: Nocardia otitidiscaviarum


organism_name: Nocardia africana


organism_name: Pandoraea pnomenusa


organism_name: Bacillus subtilis


organism_name: Yersinia pseudotuberculosis


organism_name: Pantoea agglomerans


infraspecific_name: strain=NCTC 10774

organism_name: Neisseria mucosa


organism_name: Pannonibacter phragmitetus


organism_name: [Pasteurella] mairii


organism_name: Avibacterium gallinarum


organism_name: Paenibacillus macerans


organism_name: Pasteurella bettyae


organism_name: Paenibacillus polymyxa


infraspecific_name: strain=NCTC 11297

organism_name: Avibacterium avium


organism_name: Paenibacillus thiaminolyticus


organism_name: Pasteurella multocida subsp. septica


organism_name: Pandoraea pulmonicola


organism_name: Photobacterium damselae


organism_name: Peptostreptococcus anaerobius


organism_name: Plesiomonas shigelloides


organism_name: Pasteurella multocida


organism_name: Peptoniphilus indolicus


organism_name: Peptoniphilus harei


organism_name: Pasteurella testudinis


organism_name: Peptoniphilus lacrimalis


organism_name: Pasteurella canis


organism_name: Pediococcus pentosaceus


organism_name: Porphyromonas macacae


organism_name: Pragia fontium


organism_name: Porphyromonas endodontalis


organism_name: Prevotella denticola


organism_name: Segatella buccae


organism_name: Phocoenobacter uteri


organism_name: Pluralibacter gergoviae


organism_name: Prevotella pallens


organism_name: Porphyromonas cangingivalis


organism_name: Prevotella disiens


organism_name: Prevotella nigrescens


organism_name: Proteus mirabilis


organism_name: Prevotella intermedia


organism_name: Proteus penneri


organism_name: Proteus vulgaris


organism_name: Providencia rustigianii


organism_name: Providencia rettgeri


organism_name: Pseudomonas aeruginosa


organism_name: Providencia alcalifaciens


organism_name: Providencia stuartii


organism_name: Pseudoalteromonas nigrifaciens


excluded_from_refseq: unverified source organism; annotation fails completeness check; many frameshifted proteins


organism_name: Pseudomonas fluorescens


organism_name: Aquipseudomonas alcaligenes


organism_name: Pseudomonas chlororaphis


organism_name: Pseudomonas luteola


organism_name: Ralstonia mannitolilytica


organism_name: Ectopseudomonas mendocina


organism_name: Pseudomonas putida


organism_name: Ectopseudomonas oleovorans


organism_name: Stutzerimonas stutzeri


organism_name: Rhodococcus gordoniae


organism_name: Rhodococcus wratislaviensis


organism_name: Nocardia farcinica


organism_name: Rikenella microfusus


excluded_from_refseq: RefSeq annotation failed

organism_name: Salmonella enterica


organism_name: Klebsiella planticola


organism_name: Salmonella enterica subsp. enterica serovar Montevideo


organism_name: Agrobacterium tumefaciens


organism_name: Ralstonia pickettii


organism_name: Prescottella equi


organism_name: Rhodococcus erythropolis


organism_name: Roseomonas gilardii subsp. rosea


organism_name: Salmonella enterica subsp. enterica serovar Bovismorbificans


organism_name: Rothia dentocariosa


organism_name: Salmonella enterica subsp. enterica serovar Sendai


organism_name: Roseomonas mucosa


organism_name: Psychrobacter phenylpyruvicus


excluded_from_refseq: RefSeq annotation failed; annotation fails completeness check


excluded_from_refseq: RefSeq annotation failed; annotation fails completeness check; many frameshifted proteins

organism_name: Salmonella enterica subsp. arizonae


organism_name: Salmonella enterica subsp. enterica serovar Dublin


excluded_from_refseq: RefSeq annotation failed; many frameshifted proteins


organism_name: Salmonella enterica subsp. enterica serovar Pullorum


organism_name: Salmonella enterica subsp. enterica serovar Hartford


organism_name: Salmonella enterica


organism_name: Salmonella enterica subsp. diarizonae


organism_name: Salmonella enterica subsp. enterica


organism_name: Salmonella enterica subsp. enterica serovar Singapore


organism_name: Salmonella enterica subsp. enterica serovar Oranienburg


organism_name: Salmonella enterica subsp. enterica serovar Panama


organism_name: Salmonella enterica subsp. enterica serovar Madelia


organism_name: Salmonella enterica subsp. enterica serovar Braenderup


organism_name: Salmonella enterica subsp. enterica serovar Paratyphi A


organism_name: Salmonella enterica subsp. enterica serovar Choleraesuis


organism_name: Salmonella enterica subsp. enterica serovar Virchow


organism_name: Salmonella enterica subsp. enterica serovar Typhi


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Gallinarum


organism_name: Sarcina ventriculi


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Sebaldella termitidis


organism_name: Serratia marcescens


organism_name: Salmonella enterica subsp. indica


organism_name: Salmonella enterica subsp. salamae


organism_name: Serratia grimesii


organism_name: Serratia quinivorans


organism_name: Shewanella baltica


organism_name: Shewanella morhuae


organism_name: Shewanella putrefaciens


organism_name: Serratia liquefaciens


organism_name: Shigella boydii


organism_name: Sphingobacterium multivorum


organism_name: Shewanella algae


organism_name: Shigella flexneri


organism_name: Shigella sonnei


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Shigella dysenteriae


organism_name: Salmonella enterica subsp. enterica


organism_name: Staphylococcus aureus


organism_name: Sphingobacterium spiritivorum


organism_name: Staphylococcus arlettae


organism_name: Staphylococcus argenteus


organism_name: Sporosarcina pasteurii


organism_name: Sphingomonas paucimobilis


organism_name: Staphylococcus agnetis


organism_name: Staphylococcus chromogenes


organism_name: Staphylococcus cohnii


organism_name: Staphylococcus devriesei


organism_name: Staphylococcus carnosus


organism_name: Staphylococcus caprae


organism_name: Mammaliicoccus fleurettii


organism_name: Staphylococcus epidermidis


infraspecific_name: strain=NCTC 11048

organism_name: Staphylococcus intermedius NCTC 11048


organism_name: Staphylococcus equorum


organism_name: Staphylococcus haemolyticus


organism_name: Staphylococcus gallinarum


infraspecific_name: strain=NCTC 11320

organism_name: Staphylococcus hominis


organism_name: Staphylococcus petrasii


organism_name: Staphylococcus saprophyticus


organism_name: Staphylococcus nepalensis


organism_name: Staphylococcus microti


organism_name: Staphylococcus warneri


organism_name: Staphylococcus aureus


organism_name: Mammaliicoccus lentus


infraspecific_name: strain=NCTC 7802


organism_name: Staphylococcus xylosus


organism_name: Staphylococcus kloosii


organism_name: Staphylococcus saccharolyticus


organism_name: Staphylococcus cohnii


assembly_level: Complete Genome

organism_name: Staphylococcus schleiferi


organism_name: Streptococcus agalactiae


organism_name: Streptobacillus moniliformis


organism_name: Streptococcus acidominimus


organism_name: Streptococcus dysgalactiae


organism_name: Streptococcus constellatus


infraspecific_name: strain=NCTC 11391

organism_name: Streptococcus downei MFe28


infraspecific_name: strain=NCTC 12092

organism_name: Streptococcus equi subsp. equi


organism_name: Streptococcus dysgalactiae subsp. dysgalactiae


organism_name: Streptococcus criceti


organism_name: Streptococcus equinus


organism_name: Faecalicoccus pleomorphus


organism_name: Streptococcus milleri


organism_name: Streptococcus mutans


organism_name: Streptococcus parasanguinis


organism_name: Streptococcus massiliensis


organism_name: Streptococcus hyointestinalis


organism_name: Streptococcus infantis


organism_name: Streptococcus mitis

relation_to_type_material: assembly designated as neotype


organism_name: Streptococcus infantarius


organism_name: Streptococcus equi subsp. zooepidemicus


infraspecific_name: strain=NCTC 11558

organism_name: Streptococcus macacae NCTC 11558


organism_name: Streptococcus pneumoniae


organism_name: Streptococcus gallolyticus


organism_name: Streptococcus pyogenes


organism_name: Streptococcus uberis


excluded_from_refseq: genome length too large; many frameshifted proteins

organism_name: Streptococcus dysgalactiae


organism_name: Streptomyces griseus


organism_name: Streptococcus viridans


organism_name: Streptococcus dysgalactiae subsp. equisimilis


organism_name: Tsukamurella pulmonis


organism_name: Vibrio harveyi


organism_name: Legionella maceachernii


organism_name: Suttonella indologenes


organism_name: Vibrio furnissii


organism_name: Veillonella atypica


organism_name: Vibrio fluvialis


organism_name: Vibrio cincinnatiensis


organism_name: Suttonella ornithocola


organism_name: Vibrio alginolyticus


organism_name: Vibrio metschnikovii


organism_name: Veillonella criceti


organism_name: Tissierella praeacuta


organism_name: Trueperella pyogenes


organism_name: Tsukamurella paurometabola


organism_name: Vibrio mimicus


organism_name: Vibrio owensii


organism_name: Vibrio parahaemolyticus


organism_name: Yersinia frederiksenii


organism_name: Vibrio vulnificus


organism_name: Weissella viridescens


organism_name: Yersinia pestis


organism_name: Weeksella virosa


organism_name: Yersinia enterocolitica


organism_name: Yersinia kristensenii


organism_name: Brucella suis


organism_name: Actinobacillus seminis


organism_name: Yokenella regensburgei


organism_name: Yersinia pseudotuberculosis


organism_name: Yersinia ruckeri


organism_name: Campylobacter coli


organism_name: Campylobacter hyointestinalis


organism_name: Campylobacter jejuni


organism_name: Campylobacter sputorum subsp. sputorum


organism_name: Citrobacter amalonaticus


organism_name: Campylobacter ureolyticus


organism_name: Citrobacter freundii


organism_name: Capnocytophaga canimorsus


organism_name: Capnocytophaga ochracea


organism_name: Citrobacter braakii


excluded_from_refseq: unverified source organism; many frameshifted proteins


organism_name: Cardiobacterium valvarum


organism_name: Chromobacterium violaceum


annotation_name: Annotation submitted by Wellcome Sanger Institute

annotation_provider: Wellcome Sanger Institute

asm_submitter: Wellcome Sanger Institute


organism_name: Citrobacter koseri


organism_name: Chryseobacterium indologenes


organism_name: Cedecea neteri


organism_name: Clostridium perfringens


organism_name: Clostridium fallax


organism_name: Clostridium baratii


organism_name: Clostridium sporogenes


organism_name: Clostridium putrefaciens


organism_name: Blautia producta


organism_name: Corynebacterium jeikeium


organism_name: Enterococcus gallinarum


organism_name: Corynebacterium diphtheriae bv. mitis


organism_name: Comamonas testosteroni


organism_name: Clostridium tetanomorphum


excluded_from_refseq: unverified source organism; genome length too small

organism_name: Clostridium paraputrificum


organism_name: [Clostridium] symbiosum


organism_name: Clostridium novyi


organism_name: Lacrimispora sphenoides


organism_name: Collinsella aerofaciens


organism_name: Helicobacter fennelliae


excluded_from_refseq: annotation fails completeness check

organism_name: Klebsiella pneumoniae


organism_name: Corynebacterium amycolatum


organism_name: Clostridium perfringens


organism_name: Klebsiella aerogenes


organism_name: Clostridium perfringens NCTC 8239


organism_name: Clostridium tetani


organism_name: Comamonas terrigena


organism_name: Helicobacter acinonychis


excluded_from_refseq: annotation fails completeness check; many frameshifted proteins


excluded_from_refseq: many frameshifted proteins

organism_name: Klebsiella pneumoniae subsp. ozaenae


organism_name: Klebsiella michiganensis


organism_name: Klebsiella grimontii


organism_name: Legionella busanensis


organism_name: Legionella pneumophila


organism_name: Legionella quinlivanii


organism_name: Legionella feeleii


excluded_from_refseq: unverified source organism; genome length too small; not used as type

organism_name: Legionella longbeachae


organism_name: Legionella parisiensis


organism_name: Leuconostoc mesenteroides


organism_name: Paenilisteria newyorkensis


organism_name: Pseudomonas aeruginosa


organism_name: Streptococcus pyogenes


organism_name: Streptococcus pneumoniae


organism_name: Ralstonia mannitolilytica


annotation_name: Annotation submitted by URMITE

annotation_provider: URMITE

asm_submitter: URMITE

organism_name: Clostridium neonatale


assembly_level: Scaffold


annotation_name: Annotation submitted by Genoscope CEA

annotation_provider: Genoscope CEA

asm_submitter: Genoscope CEA

infraspecific_name: strain=DB21MT 5

organism_name: Moritella yayanosii


asm_submitter: AIT

organism_name: Escherichia coli


organism_name: Enterobacter hormaechei


isolate: OS 2

organism_name: Klebsiella pneumoniae


isolate: Homo sapiens


annotation_name: Annotation submitted by Institute of Microbiology of the Czech Academy of Sciences, v.v.i.

isolate: Bordetella pertussis

organism_name: Bordetella pertussis


isolate: OS 8


annotation_provider: Institute of Microbiology of the Czech Academy of Sciences, v.v.i.


asm_submitter: Institute of Microbiology of the Czech Academy of Sciences, v.v.i.


annotation_name: Annotation submitted by Universite Lyon1

annotation_provider: Universite Lyon1

asm_name: Frankia Ea1-12

asm_submitter: Universite Lyon1

organism_name: Parafrankia sp. Ea1.12


organism_name: Asaia bogorensis


asm_name: BOT-CA-S

asm_submitter: IZSLER

isolate: BOT-CA-S


annotation_name: Annotation submitted by AALBORG UNIVERSITY

annotation_provider: AALBORG UNIVERSITY

asm_submitter: AALBORG UNIVERSITY

isolate: BARAN1 MAG

organism_name: Bipolaricaulis sanaerobius (SeqCode)


asm_name: BOT-CA-R

isolate: BOT-CA-R


asm_name: BOT-EMO

isolate: BOT-EMO


asm_name: Acinetobacter baylyi 93A2

asm_submitter: UNIVERSITE CLAUDE BERNARD LYON 1

organism_name: Acinetobacter baylyi


asm_submitter: Universita' degli Studi di Milano


asm_submitter: MPIPZ

excluded_from_refseq: genus undefined

organism_name: Hyphomicrobiales bacterium


asm_name: Rg

isolate: Rg


asm_submitter: UNIVERSITY OF SOUTHERN CALIFORNIA

organism_name: Synechococcus sp. N32


organism_name: Synechococcus sp. N5


organism_name: Synechococcus sp. UW105


asm_name: GEYO

isolate: GEYO

organism_name: Synechococcus sp. GEYO


organism_name: Synechococcus sp. UW179A


organism_name: Synechococcus sp. N26


organism_name: Synechococcus sp. UW106


organism_name: Synechococcus sp. N19


organism_name: Synechococcus sp. UW86


organism_name: Synechococcus sp. UW69


organism_name: Synechococcus sp. UW179B


organism_name: Synechococcus sp. UW140


annotation_name: Annotation submitted by WTSI

annotation_provider: WTSI

asm_submitter: WTSI

organism_name: Klebsiella pneumoniae


organism_name: Mannheimia haemolytica


organism_name: Campylobacter jejuni subsp. doylei


organism_name: Escherichia coli


organism_name: Streptococcus pyogenes


organism_name: Klebsiella quasipneumoniae


organism_name: Staphylococcus aureus


organism_name: Staphylococcus hyicus


organism_name: Enterococcus cecorum


organism_name: Mammaliicoccus sciuri


organism_name: Staphylococcus simulans


organism_name: Staphylococcus lugdunensis


organism_name: Streptococcus dysgalactiae subsp. equisimilis


organism_name: Streptococcus equi subsp. zooepidemicus


organism_name: Streptococcus agalactiae


organism_name: Streptococcus thermophilus


organism_name: Streptococcus gordonii


organism_name: Streptococcus ferus


organism_name: Streptococcus sanguinis


organism_name: Streptococcus lutetiensis


organism_name: Streptococcus mutans


organism_name: Streptococcus pyogenes


organism_name: Actinobacillus pleuropneumoniae


organism_name: Pseudomonas fluorescens


organism_name: Streptococcus salivarius


organism_name: Mycoplasmopsis synoviae


organism_name: Staphylococcus aureus subsp. aureus NCTC 8325


organism_name: Campylobacter jejuni subsp. jejuni


organism_name: Pseudomonas taetrolens


organism_name: Streptococcus pneumoniae


organism_name: Neisseria cinerea


excluded_from_refseq: misassembled; not used as type

organism_name: Paucimonas lemoignei


organism_name: Bartonella quintana


organism_name: Streptococcus agalactiae


organism_name: Streptococcus sobrinus


organism_name: Elizabethkingia meningoseptica


organism_name: Streptococcus gordonii


organism_name: Stenotrophomonas maltophilia


organism_name: Streptococcus porcinus


organism_name: Streptococcus pyogenes


organism_name: Streptococcus equi subsp. zooepidemicus


organism_name: Streptococcus cristatus ATCC 51100


organism_name: Streptococcus sanguinis


organism_name: Haemophilus influenzae


organism_name: Clostridium perfringens


organism_name: Micrococcus luteus NCTC 2665


organism_name: Achromobacter xylosoxidans


organism_name: Streptococcus suis


organism_name: Streptococcus uberis


organism_name: Corynebacterium ulcerans


organism_name: Levilactobacillus brevis


organism_name: Corynebacterium renale


organism_name: Bordetella pertussis


organism_name: Streptococcus lutetiensis


organism_name: Stenotrophomonas maltophilia


organism_name: Streptococcus gallolyticus


organism_name: Streptococcus dysgalactiae subsp. equisimilis


organism_name: Legionella pneumophila


organism_name: Legionella pneumophila subsp. pascullei


organism_name: Streptococcus pyogenes


organism_name: Streptococcus pneumoniae


organism_name: Neisseria elongata subsp. glycolytica


organism_name: Salmonella enterica subsp. enterica serovar Thompson


organism_name: Jonesia denitrificans


organism_name: Bordetella parapertussis


organism_name: Providencia heimbachae


organism_name: Haemophilus aegyptius


organism_name: Salmonella enterica


organism_name: Kingella kingae


organism_name: Arcanobacterium haemolyticum


organism_name: Campylobacter fetus subsp. fetus


organism_name: Pseudomonas mucidolens


organism_name: Salmonella enterica subsp. enterica serovar Stanley


organism_name: Streptococcus intermedius


organism_name: Haemophilus influenzae


organism_name: Aeromonas caviae


organism_name: Streptococcus pyogenes


organism_name: Acholeplasma laidlawii


organism_name: Aggregatibacter segnis ATCC 33393


organism_name: Gemella morbillorum


organism_name: Streptococcus australis


organism_name: Mesomycoplasma hyorhinis


organism_name: Moraxella catarrhalis


organism_name: Mycoplasmoides gallisepticum


organism_name: Mycoplasmopsis edwardii


organism_name: Metamycoplasma alkalescens


organism_name: Mycoplasma putrefaciens


organism_name: Helicobacter mustelae


organism_name: Porphyromonas crevioricanis


annotation_name: Annotation submitted by Zurich University of Applied Sciences (ZHAW), School of Life Sciences and Facility Management, Institute of Natural Resource Sciences

infraspecific_name: strain=CPBF 1521

isolate: CPBF 1521

organism_name: Xanthomonas arboricola pv. juglandis


annotation_name: Annotation submitted by WAGENINGEN UNIVERSITY

annotation_provider: WAGENINGEN UNIVERSITY

asm_name: Lucifera butyrica

asm_submitter: WAGENINGEN UNIVERSITY

isolate: LUCI

organism_name: Allolucifera butyrica


annotation_provider: Zurich University of Applied Sciences (ZHAW), School of Life Sciences and Facility Management, Institute of Natural Resource Sciences

infraspecific_name: strain=CPBF 424

isolate: CPBF 424

organism_name: Xanthomonas euroxanthea


organism_name: Shewanella benthica


organism_name: Streptococcus pneumoniae


organism_name: Klebsiella terrigena


organism_name: Acinetobacter baumannii


organism_name: Acinetobacter nosocomialis


organism_name: Salmonella enterica subsp. enterica serovar Aberdeen


organism_name: Salmonella enterica subsp. enterica serovar Carmel


organism_name: Salmonella enterica subsp. enterica serovar Sundsvall


organism_name: Salmonella enterica subsp. enterica serovar Give


organism_name: Haemophilus haemolyticus


organism_name: Corynebacterium jeikeium


organism_name: Salmonella enterica subsp. salamae


organism_name: Salmonella enterica subsp. enterica serovar Florida


organism_name: Clostridium perfringens


organism_name: Streptococcus pasteurianus


organism_name: Corynebacterium renale


organism_name: Corynebacterium minutissimum


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg


organism_name: Providencia alcalifaciens


organism_name: Salmonella enterica subsp. arizonae


organism_name: Rhodococcus coprophilus


organism_name: Serratia plymuthica


organism_name: Leminorella richardii


organism_name: Acinetobacter baumannii


organism_name: Salmonella enterica subsp. diarizonae


organism_name: Lederbergia lenta


organism_name: Pasteurella multocida


organism_name: Streptococcus cristatus


organism_name: Salmonella enterica subsp. salamae serovar Greenside


organism_name: Salmonella enterica subsp. enterica serovar Bredeney


organism_name: Salmonella enterica subsp. houtenae serovar Houten


organism_name: Salmonella enterica subsp. salamae


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Staphylococcus aureus


organism_name: Staphylococcus lugdunensis


organism_name: Aggregatibacter aphrophilus


organism_name: Haemophilus influenzae


organism_name: Klebsiella oxytoca


infraspecific_name: strain=NCTC 11637

organism_name: Helicobacter pylori NCTC 11637 = CCUG 17874 = ATCC 43504 = JCM 12093


organism_name: Salmonella enterica subsp. enterica serovar Typhi


organism_name: Fusobacterium ulcerans


organism_name: Escherichia coli


organism_name: Salmonella enterica subsp. enterica serovar Menston


organism_name: Salmonella enterica subsp. enterica serovar Thompson


organism_name: Salmonella enterica subsp. enterica serovar Poona


organism_name: Serratia rubidaea


organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


organism_name: Staphylococcus auricularis


organism_name: Salmonella enterica


organism_name: Tatumella ptyseos


organism_name: Pseudomonas aeruginosa


organism_name: Morganella morganii


excluded_from_refseq: contaminated


organism_name: Staphylococcus aureus


organism_name: Shigella flexneri 2a


organism_name: Shigella sonnei


organism_name: Shigella flexneri 2b


organism_name: Shigella flexneri


excluded_from_refseq: fragmented assembly; genome length too small


asm_submitter: INSTITUT PASTEUR


excluded_from_refseq: genome length too large


annotation_name: Annotation submitted by INSTITUT PASTEUR

annotation_provider: INSTITUT PASTEUR

asm_name: Aequorivita CIP111184 annotated assembly

organism_name: Aequorivita sp. CIP111184


asm_name: Aequorivita CIP107455T annotated assembly

infraspecific_name: strain=type strain: CIP107455

organism_name: Aequorivita lipolytica


organism_name: Acinetobacter baumannii


annotation_name: Annotation submitted by SIB

annotation_provider: SIB

asm_name: MMC-glpFKO

asm_submitter: SIB

isolate: synthetic

organism_name: Mycoplasma mycoides subsp. capri


asm_name: MMC-glpK


asm_name: MMC-glpQ


asm_name: MMC-glpF


asm_name: MMC-glpU


asm_name: MMC-glpF-glpU


asm_name: MMC-glpO


asm_name: MMC-GTS-glpFKO


asm_name: MMC-GTS


asm_name: MMC-GTS-glpF


asm_name: MMC-GTS-gIpF-gIpU


asm_name: MMC-GTS-glpU


organism_name: Escherichia coli


asm_name: MMC-TET


asm_name: Aequorivita CIP107457T annotated assembly

infraspecific_name: strain=type strain: CIP107457

organism_name: Aequorivita antarctica


asm_submitter: KING ABDULAZIZ UNIVERSITY

isolate: Human

organism_name: Enterococcus faecium


organism_name: Hyphomicrobiales bacterium


asm_submitter: SC


asm_name: De novo assembly of KCRI isolate R0009_598B

asm_submitter: Kilimanjaro Clinical Research Institute


asm_name: De novo assembly of KCRI isolate R0004_245


asm_name: De novo assembly of KCRI isolate R0008_247


asm_name: De novo assembly of KCRI isolate R0007_244


asm_name: De novo assembly of KCRI isolate RDK37_44


asm_name: De novo assembly of KCRI isolate RDK06_431D


asm_name: De novo assembly of KCRI isolate RDK36_21


asm_name: De novo assembly of KCRI isolate RDK01_598A


asm_name: De novo assembly of KCRI isolate RDK39_22


asm_name: De novo assembly of KCRI isolate RDK43_77E


asm_name: De novo assembly of KCRI isolate R0004_115


asm_name: De novo assembly of KCRI isolate R0003_521


asm_name: De novo assembly of KCRI isolate R0007_365


asm_name: De novo assembly of KCRI isolate RDK05_538


asm_name: De novo assembly of KCRI isolate RDK37_30


asm_name: De novo assembly of KCRI isolate RDK39_10


asm_name: De novo assembly of KCRI isolate RDK36_4


asm_name: De novo assembly of KCRI isolate RDK01_163A


asm_name: De novo assembly of KCRI isolate R0007_119EC


asm_name: De novo assembly of KCRI isolate RDK04_237C


asm_submitter: URMITE

organism_name: Streptococcus intermedius B196


asm_submitter: kyobo

organism_name: Aeromonas caviae


organism_name: Aeromonas salmonicida


organism_name: Aeromonas veronii


organism_name: Aeromonas bivalvium


organism_name: Aeromonas media


organism_name: Aeromonas allosaccharophila


asm_name: Amarolinea aalborgensis

organism_name: Candidatus Amarolinea aalborgensis


asm_submitter: WAGENINGEN UR

isolate: Francisella tularensis 15012907

organism_name: Francisella tularensis subsp. holarctica


isolate: Francisella tularensis X17000610


isolate: Francisella tularensis 16007282


asm_submitter: ANSES

isolate: NR

organism_name: Brucella canis


annotation_name: Annotation submitted by Unite de Recherche sur les Maladies Infectieuses et Tropicales Emergentes (URMITE) CNRS, Faculte de Medecine, Universite de la Mediterranee, Marseille, France

organism_name: Klenkia terrae


annotation_name: Annotation submitted by INSTITUT PASTEUR DE PARIS

annotation_provider: INSTITUT PASTEUR DE PARIS

asm_submitter: INSTITUT PASTEUR DE PARIS

organism_name: Bordetella pertussis


annotation_name: Annotation submitted by INRA (INRA Jouy en Josas)

annotation_provider: INRA (INRA Jouy en Josas)

asm_submitter: INRA (INRA Jouy en Josas)

organism_name: Streptococcus thermophilus


annotation_name: Annotation submitted by CBMSO

annotation_provider: CBMSO

asm_submitter: CBMSO

organism_name: Paenirhizobium selenitireducens ATCC BAA-1503


organism_name: Ciceribacter sp. T2.26MG-112.2


asm_submitter: BIOPOLIS

isolate: CECT 9104

organism_name: Lacticaseibacillus zeae


asm_submitter: Institute of Infection, Immunity and Inflammation

organism_name: Legionella sainthelensi


organism_name: Klebsiella pneumoniae


organism_name: Klebsiella quasipneumoniae


excluded_from_refseq: contaminated; genome length too large


excluded_from_refseq: unverified source organism; fragmented assembly; genome length too small


excluded_from_refseq: unverified source organism


excluded_from_refseq: unverified source organism; annotation fails completeness check


excluded_from_refseq: misassembled; unverified source organism; fragmented assembly


organism_name: Acinetobacter baumannii


excluded_from_refseq: contaminated; unverified source organism; genome length too small


organism_name: Enterobacter hormaechei


excluded_from_refseq: contaminated; fragmented assembly


organism_name: Klebsiella variicola


excluded_from_refseq: fragmented assembly; genome length too large


organism_name: Acinetobacter nosocomialis


organism_name: Acinetobacter pittii


excluded_from_refseq: unverified source organism; fragmented assembly; genome length too large


excluded_from_refseq: contaminated; unverified source organism; fragmented assembly; genome length too large


excluded_from_refseq: contaminated; fragmented assembly; genome length too large


excluded_from_refseq: unverified source organism; fragmented assembly; partial

genome_rep: Partial


excluded_from_refseq: unverified source organism; partial


excluded_from_refseq: unverified source organism; genome length too large


annotation_name: Annotation submitted by LM-UGent

annotation_provider: LM-UGent

asm_name: LMG 3411T

asm_submitter: LM-UGent

infraspecific_name: strain=LMG 3411

organism_name: Achromobacter agilis


infraspecific_name: strain=LMG 30378

organism_name: Achromobacter veterisilvae


annotation_name: Annotation submitted by Leibniz-Institut DSMZ-Deutsche Sammlung von Mikro

organism_name: Pseudomonas aeruginosa


annotation_provider: Leibniz-Institut DSMZ-Deutsche Sammlung von Mikro


asm_submitter: Leibniz-Institut DSMZ-Deutsche Sammlung von Mikro


organism_name: Escherichia coli


organism_name: Treponema pectinovorum


organism_name: Treponema denticola


annotation_name: Annotation submitted by The University of Birmingham

annotation_provider: The University of Birmingham

asm_submitter: The University of Birmingham

organism_name: Pseudomonas synxantha


organism_name: Brucella canis


annotation_name: Annotation submitted by JLU

annotation_provider: JLU

asm_submitter: JLU

infraspecific_name: strain=CCOS 864

organism_name: Pseudomonas wadenswilerensis


annotation_name: Annotation submitted by Genoscope CEA

asm_submitter: Genoscope CEA

assembly_level: Chromosome

excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: uncultured Desulfatiglans sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: uncultured Spirochaetota bacterium


excluded_from_refseq: derived from metagenome

organism_name: uncultured Paludibacter sp.


excluded_from_refseq: genus undefined

organism_name: Candidatus Zixiibacteriota bacterium


annotation_name: Annotation submitted by THE UNIVERSITY OF ADELAIDE

annotation_provider: THE UNIVERSITY OF ADELAIDE

asm_submitter: THE UNIVERSITY OF ADELAIDE

organism_name: uncultured Defluviicoccus sp.


asm_submitter: UNIVERSITY HOSPITAL TUEBINGEN

organism_name: Klebsiella variicola


organism_name: Klebsiella pneumoniae


organism_name: Klebsiella quasipneumoniae


organism_name: Actinomyces culturomici


annotation_name: Annotation submitted by UVEG

annotation_provider: UVEG

asm_submitter: UVEG

infraspecific_name: strain=CECT 7235

organism_name: Roseinatronobacter ekhonensis


asm_submitter: Hopital Henri Mondor APHP


excluded_from_refseq: contaminated


excluded_from_refseq: RefSeq annotation failed


organism_name: Escherichia marmotae


annotation_name: Annotation submitted by SC

annotation_provider: SC

asm_submitter: SC


excluded_from_refseq: fragmented assembly; low quality sequence


excluded_from_refseq: annotation fails completeness check


organism_name: Klebsiella quasivariicola


annotation_name: Annotation submitted by ISVV

annotation_provider: ISVV

asm_submitter: ISVV

organism_name: Oenococcus oeni


asm_submitter: Universita' degli Studi di Milano


organism_name: Serratia marcescens


organism_name: Escherichia coli


excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Staphylococcus aureus


organism_name: Acinetobacter baumannii


annotation_name: Annotation submitted by UMR CNRS 7266

annotation_provider: UMR CNRS 7266

asm_name: PBLR assembly

asm_submitter: UMR CNRS 7266

isolate: Paenibacillus B-LR1

organism_name: Paenibacillus alvei


asm_submitter: Hunan University of Science and Engineering

organism_name: Bifidobacterium longum


annotation_name: Annotation submitted by INSTITUTO NACIONAL DE SALUD

annotation_provider: INSTITUTO NACIONAL DE SALUD

asm_name: Acinetobacter baumannii 12918

asm_submitter: INSTITUTO NACIONAL DE SALUD


asm_name: Corynebacterium lactis S064

asm_submitter: Tropical Infectious Diseases Research and Education Centre

infraspecific_name: strain=Corynebacterium lactis S064

isolate: Corynebacterium lactis S064

organism_name: Corynebacterium lactis


isolate: Escherichia coli str. TO6


isolate: Escherichia coli str. TO73


annotation_name: Annotation submitted by STATENS SERUM INSTITUT

annotation_provider: STATENS SERUM INSTITUT

asm_submitter: STATENS SERUM INSTITUT

isolate: Mycobacterium tuberculosis

organism_name: Mycobacterium tuberculosis


isolate: Escherichia coli str. TO60


isolate: Citrobacter freundii str. E2614

organism_name: Citrobacter freundii


isolate: Escherichia coli str. TO124


isolate: Acinetobacter calcoaceticus str. 2117

organism_name: Acinetobacter calcoaceticus


isolate: Escherichia coli str. TO217


isolate: Citrobacter freundii str. U2785


isolate: Escherichia coli str. 3426


isolate: Escherichia coli str. TO148


infraspecific_name: strain=CCOS 865

organism_name: Pseudomonas reidholzensis


infraspecific_name: strain=ST_Warwick 12 / ST_Pasteur 36


infraspecific_name: strain=ST_Warwick 404 / ST_Pasteur 6


infraspecific_name: strain=ST_Warwick 1394 / ST_Pasteur 494


infraspecific_name: strain=ST_Warwick 95 / ST_Pasteur 1


infraspecific_name: strain=ST_Warwick 14 / ST_Pasteur 6


infraspecific_name: strain=ST_Warwick 59 / ST_Pasteur 34


asm_submitter: UMR 1137 IAME


organism_name: Enterobacter hormaechei


asm_submitter: ROBERT KOCH INSTITUT


annotation_name: Annotation submitted by WUR

annotation_provider: WUR

asm_submitter: WUR

organism_name: Propionibacterium australiense


asm_submitter: OXFORD UNIVERSITY

organism_name: Rickettsia typhi


asm_submitter: Ausgem


asm_submitter: Elham Karimi

excluded_from_refseq: contaminated; unverified source organism

organism_name: Alcanivorax sp. Alg238-V104


organism_name: Sphingorhabdus sp. Alg239-R122


organism_name: Tropicibacter sp. Alg240-R139


organism_name: Agarivorans sp. Alg241-V36


organism_name: Rhodobacteraceae bacterium Alg241-R94


organism_name: Falsiruegeria mediterranea


organism_name: Arthrobacter sp. Alg241-R88


organism_name: Rhodobacteraceae bacterium Alg238-R152


organism_name: Micrococcus sp. Alg238-R198


organism_name: Dietzia sp. Alg238-R159


organism_name: Photobacterium sp. Alg240-V54


organism_name: Enterovibrio norvegicus


organism_name: Lentilitoribacter sp. Alg239-R112


organism_name: Cytophagales bacterium Alg240-R148


annotation_name: Annotation submitted by Zurich University of Applied Sciences (ZHAW), School of Life Sciences and Facility Management, Institute of Natural Resource Sciences

infraspecific_name: strain=CPBF 427

isolate: CPBF 427

organism_name: Xanthomonas arboricola pv. juglandis


annotation_provider: Zurich University of Applied Sciences (ZHAW), School of Life Sciences and Facility Management, Institute of Natural Resource Sciences

excluded_from_refseq: unverified source organism

infraspecific_name: strain=CPBF 367

isolate: CPBF 367


asm_submitter: Zurich University of Applied Sciences (ZHAW), School of Life Sciences and Facility Management, Institute of Natural Resource Sciences

infraspecific_name: strain=CPBF 426

isolate: CPBF 426


annotation_name: Annotation submitted by INRA

annotation_provider: INRA

asm_name: Roseburia intestinalis strain L1-82

asm_submitter: INRA

organism_name: Roseburia intestinalis L1-82


annotation_name: Annotation submitted by The James Hutton Institute

annotation_provider: The James Hutton Institute

asm_submitter: The James Hutton Institute

organism_name: Pasteuria penetrans


asm_submitter: SC

infraspecific_name: strain=NCTC 30

organism_name: Vibrio paracholerae


asm_submitter: UNIVERSITY OF LIVERPOOL

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium str. D23580


annotation_name: Annotation submitted by WTSI

annotation_provider: WTSI

asm_submitter: WTSI

excluded_from_refseq: from large multi-isolate project

organism_name: Klebsiella pneumoniae


organism_name: Enterobacter hormaechei


organism_name: Candidatus Ornithobacterium hominis


annotation_name: Annotation submitted by MIO

annotation_provider: MIO

asm_submitter: MIO

organism_name: Petrocella atlantisensis


asm_submitter: EBI

organism_name: uncultured Butyrivibrio sp.


organism_name: uncultured Sutterella sp.


organism_name: uncultured Collinsella sp.


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: uncultured Dysgonomonas sp.


organism_name: uncultured Solobacterium sp.


excluded_from_refseq: RefSeq annotation failed; derived from metagenome

organism_name: uncultured Slackia sp.


organism_name: uncultured Veillonella sp.


organism_name: uncultured Acidaminococcus sp.


organism_name: uncultured Porphyromonas sp.


organism_name: uncultured Catenibacterium sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Megasphaera sp.


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Butyricimonas sp.


organism_name: uncultured Eggerthella sp.


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Ruminococcus sp.


excluded_from_refseq: RefSeq annotation failed; annotation fails MAG completeness check; derived from metagenome

organism_name: uncultured Lachnospira sp.


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Peptoniphilus sp.


organism_name: uncultured Blautia sp.


organism_name: uncultured Coprococcus sp.


organism_name: uncultured Anaeromassilibacillus sp.


excluded_from_refseq: contaminated; derived from metagenome


organism_name: uncultured Pantoea sp.


organism_name: uncultured Alistipes sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Azospirillum sp.


organism_name: uncultured Corynebacterium sp.


organism_name: uncultured Dialister sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Sutterella sp.


organism_name: uncultured Bifidobacterium sp.


organism_name: uncultured Megasphaera sp.


organism_name: uncultured Olsenella sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Lachnospira sp.


organism_name: uncultured Roseburia sp.


organism_name: uncultured Faecalibacterium sp.


organism_name: uncultured Peptoniphilus sp.


organism_name: uncultured Cryptobacterium sp.


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Blautia sp.


organism_name: uncultured Porphyromonas sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Campylobacter sp.


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Sutterella sp.


organism_name: uncultured Megasphaera sp.


organism_name: uncultured Granulicatella sp.


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Coriobacteriaceae bacterium


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Alistipes sp.


organism_name: uncultured Succiniclasticum sp.


organism_name: uncultured Paenibacillus sp.


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Roseburia sp.


organism_name: uncultured Blautia sp.


organism_name: uncultured Succinatimonas sp.


organism_name: uncultured Azospirillum sp.


organism_name: uncultured Streptococcus sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Akkermansia sp.


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Robinsoniella sp.


organism_name: uncultured Coriobacteriaceae bacterium


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Collinsella sp.


organism_name: uncultured Megasphaera sp.


organism_name: uncultured Alistipes sp.


organism_name: uncultured Porphyromonas sp.


organism_name: uncultured Anaerotruncus sp.


organism_name: uncultured Phyllobacterium sp.


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Faecalibacterium sp.


organism_name: uncultured Akkermansia sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Solobacterium sp.


organism_name: uncultured Corynebacterium sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Eggerthella sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Enterobacter sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Aeromonas sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Alistipes sp.


organism_name: uncultured Parabacteroides sp.


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Anaeromassilibacillus sp.


organism_name: uncultured Dialister sp.


organism_name: uncultured Azospirillum sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Barnesiella sp.


excluded_from_refseq: contaminated; derived from metagenome; genus undefined


organism_name: uncultured Prevotella sp.


organism_name: Candidatus Avelusimicrobium faecicola


organism_name: uncultured Actinomyces sp.


organism_name: uncultured Phascolarctobacterium sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: uncultured Faecalibacterium sp.


organism_name: uncultured Robinsoniella sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Acidaminococcus sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Collinsella sp.


organism_name: uncultured Lachnospira sp.


organism_name: uncultured Lactobacillus sp.


excluded_from_refseq: derived from metagenome

organism_name: uncultured Eggerthella sp.


organism_name: uncultured Catenibacterium sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Parabacteroides sp.


organism_name: uncultured Megasphaera sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Blautia sp.


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Olsenella sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Porphyromonas sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Solobacterium sp.


organism_name: Candidatus Avelusimicrobium fimicolum


organism_name: uncultured Anaerococcus sp.


excluded_from_refseq: contaminated; annotation fails MAG completeness check; derived from metagenome

organism_name: uncultured Butyricicoccus sp.


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Odoribacter sp.


organism_name: uncultured Acinetobacter sp.


organism_name: uncultured Sutterella sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Fusobacterium sp.


organism_name: uncultured Dialister sp.


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Alistipes sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Prevotella sp.


organism_name: uncultured Succiniclasticum sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Solobacterium sp.


organism_name: uncultured Olsenella sp.


organism_name: uncultured Actinomyces sp.


organism_name: uncultured Phascolarctobacterium sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Prevotellaceae bacterium


organism_name: uncultured Treponema sp.


organism_name: uncultured Blautia sp.


organism_name: uncultured Parabacteroides sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Azospirillum sp.


organism_name: uncultured Eggerthella sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Sutterella sp.


organism_name: uncultured Sneathia sp.


organism_name: uncultured Dialister sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Faecalibacterium sp.


organism_name: uncultured Acidaminococcus sp.


organism_name: uncultured Bacteroidota bacterium


organism_name: uncultured Roseburia sp.


organism_name: uncultured Alistipes sp.


organism_name: uncultured Phascolarctobacterium sp.


organism_name: uncultured Eggerthella sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Adlercreutzia sp.


organism_name: uncultured Fusobacterium sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Subdoligranulum sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Dorea sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Actinomyces sp.


organism_name: Candidatus Avelusimicrobium alvi


organism_name: uncultured Sutterella sp.


organism_name: uncultured Pelosinus sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Solobacterium sp.


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Gemmiger sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Collinsella sp.


organism_name: uncultured Streptococcus sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Dialister sp.


organism_name: uncultured Fusobacterium sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Porphyromonas sp.


organism_name: uncultured Lachnoclostridium sp.


organism_name: uncultured Sporolactobacillus sp.


organism_name: uncultured Alistipes sp.


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Prevotellaceae bacterium


organism_name: uncultured Coriobacteriaceae bacterium


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Dorea sp.


organism_name: uncultured Sanguibacteroides sp.


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Lachnobacterium sp.


organism_name: uncultured Dialister sp.


organism_name: uncultured Roseburia sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Anaerococcus sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Blautia sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Bifidobacterium sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Flavobacterium sp.


organism_name: uncultured Fusobacterium sp.


organism_name: uncultured Sutterella sp.


organism_name: uncultured Prevotellaceae bacterium


organism_name: uncultured Coriobacteriaceae bacterium


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Veillonella sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Olsenella sp.


organism_name: uncultured Odoribacter sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Alistipes sp.


organism_name: uncultured Parabacteroides sp.


organism_name: uncultured Sutterella sp.


organism_name: uncultured Succiniclasticum sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Opitutales bacterium


organism_name: uncultured Veillonella sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Acidaminococcus sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Eggerthella sp.


organism_name: uncultured Butyricicoccus sp.


organism_name: uncultured Coriobacteriaceae bacterium


organism_name: uncultured Prevotella sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Rickettsiales bacterium


organism_name: uncultured Mycoplasmataceae bacterium


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Cloacibacillus sp.


organism_name: uncultured Solobacterium sp.


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Collinsella sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Porphyromonas sp.


organism_name: uncultured Phascolarctobacterium sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Sutterella sp.


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Fusobacterium sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Peptostreptococcus sp.


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Akkermansia sp.


organism_name: uncultured Veillonella sp.


organism_name: uncultured Bacteroidota bacterium


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Negativicoccus sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Alistipes sp.


organism_name: uncultured Dialister sp.


organism_name: uncultured Rothia sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Prevotella sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Brachyspira sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Phascolarctobacterium sp.


organism_name: uncultured Subdoligranulum sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Pseudobutyrivibrio sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Treponema sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Opitutales bacterium


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Cloacibacillus sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Dialister sp.


organism_name: uncultured Veillonella sp.


organism_name: uncultured Actinomyces sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Barnesiella sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Alistipes sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Morganella sp.


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Blautia sp.


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Eggerthella sp.


organism_name: uncultured Rickettsiales bacterium


organism_name: uncultured Solobacterium sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Streptococcus sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Collinsella sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Pseudobutyrivibrio sp.


organism_name: uncultured Bacteroidota bacterium


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Opitutales bacterium


organism_name: uncultured Lactobacillus sp.


organism_name: uncultured Lachnobacterium sp.


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Treponema sp.


organism_name: uncultured Paraprevotella sp.


organism_name: uncultured Porphyromonas sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Collinsella sp.


organism_name: uncultured Veillonellaceae bacterium


organism_name: uncultured Butyrivibrio sp.


organism_name: Candidatus Apopatosoma intestinale


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Micrococcaceae bacterium


organism_name: uncultured Anaeromassilibacillus sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Sutterella sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Anaerosporobacter sp.


organism_name: uncultured Opitutales bacterium


organism_name: uncultured Actinomyces sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured bacterium


organism_name: uncultured Veillonella sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Butyricicoccus sp.


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Collinsella sp.


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Blautia sp.


organism_name: uncultured Pantoea sp.


organism_name: uncultured Butyricimonas sp.


organism_name: uncultured Dorea sp.


organism_name: uncultured Phascolarctobacterium sp.


organism_name: uncultured Parabacteroides sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Faecalibacterium sp.


organism_name: uncultured Oribacterium sp.


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Prevotella sp.


organism_name: uncultured bacterium


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Blautia sp.


organism_name: uncultured Lachnobacterium sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Dialister sp.


organism_name: uncultured Solobacterium sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Eggerthella sp.


organism_name: uncultured Roseburia sp.


organism_name: uncultured Anaerotruncus sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Odoribacter sp.


organism_name: uncultured Alistipes sp.


organism_name: uncultured Veillonellaceae bacterium


organism_name: uncultured Parabacteroides sp.


organism_name: uncultured Opitutales bacterium


organism_name: uncultured Prevotella sp.


organism_name: uncultured Coprococcus sp.


organism_name: uncultured bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Blautia sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Fusobacterium sp.


organism_name: uncultured Paraprevotella sp.


excluded_from_refseq: genus undefined


organism_name: uncultured Porphyromonas sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Olsenella sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Succinatimonas sp.


organism_name: uncultured Oscillibacter sp.


organism_name: Candidatus Segatella intestinihominis

paired_asm_comp: different


organism_name: uncultured Prevotella sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: Candidatus Colimorpha enterica


organism_name: uncultured Megasphaera sp.


organism_name: uncultured bacterium


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Collinsella sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Lachnobacterium sp.


organism_name: uncultured Olsenella sp.


organism_name: uncultured Coprococcus sp.


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Akkermansia sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Butyricimonas sp.


organism_name: uncultured Parabacteroides sp.


organism_name: uncultured Solobacterium sp.


organism_name: uncultured Eggerthella sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Blautia sp.


organism_name: uncultured bacterium


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Collinsella sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Prevotella sp.


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Rhodocyclaceae bacterium


organism_name: uncultured Alistipes sp.


organism_name: uncultured Rickettsiales bacterium


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Megasphaera sp.


excluded_from_refseq: contaminated; unverified source organism; derived from metagenome

organism_name: uncultured Halomonas sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Fusobacterium sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Atopobium sp.


organism_name: uncultured Coriobacteriaceae bacterium


organism_name: uncultured Parabacteroides sp.


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Prevotella sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Alistipes sp.


organism_name: uncultured Succiniclasticum sp.


organism_name: uncultured Veillonella sp.


organism_name: uncultured bacterium


organism_name: uncultured Anaerofustis sp.


organism_name: uncultured Lachnobacterium sp.


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Solobacterium sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Klebsiella sp.


organism_name: uncultured Coriobacteriaceae bacterium


organism_name: uncultured Collinsella sp.


organism_name: uncultured Anaerostipes sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Pelosinus sp.


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Veillonella sp.


organism_name: uncultured bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Prevotella sp.


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Anaerococcus sp.


organism_name: uncultured Alistipes sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Rhodospirillaceae bacterium


organism_name: uncultured Spirochaetaceae bacterium


organism_name: uncultured Rickettsiales bacterium


organism_name: uncultured Collinsella sp.


organism_name: uncultured Lachnobacterium sp.


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Butyricicoccus sp.


organism_name: uncultured Selenomonas sp.


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Marvinbryantia sp.


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Dorea sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Streptococcus sp.


organism_name: uncultured bacterium


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Alistipes sp.


organism_name: uncultured Roseburia sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Blautia sp.


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Opitutales bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Enterococcus sp.


organism_name: uncultured Anaerococcus sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Eggerthella sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Rhodospirillaceae bacterium


organism_name: uncultured bacterium


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Solobacterium sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Phascolarctobacterium sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Subdoligranulum sp.


organism_name: uncultured Faecalibacterium sp.


organism_name: uncultured Blautia sp.


organism_name: uncultured Bifidobacterium sp.


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Granulicatella sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Coriobacteriaceae bacterium


organism_name: uncultured Bacteroides sp.


organism_name: uncultured bacterium


organism_name: uncultured Prevotella sp.


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Flavobacteriales bacterium


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Rickettsiales bacterium


organism_name: uncultured Porphyromonas sp.


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Phascolarctobacterium sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Solobacterium sp.


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Lachnobacterium sp.


organism_name: uncultured Blautia sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Clostridium sp.


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome

organism_name: uncultured Collinsella sp.


organism_name: uncultured Veillonellaceae bacterium


organism_name: uncultured Dialister sp.


organism_name: uncultured Sutterella sp.


organism_name: uncultured bacterium


organism_name: uncultured Opitutales bacterium


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Coriobacteriaceae bacterium


organism_name: uncultured Parabacteroides sp.


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Veillonella sp.


organism_name: uncultured Peptococcaceae bacterium


organism_name: uncultured Prevotella sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Selenomonas sp.


organism_name: uncultured Roseburia sp.


organism_name: uncultured Bifidobacterium sp.


organism_name: uncultured Collinsella sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Eubacteriales bacterium


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genus undefined


organism_name: uncultured Eubacterium sp.


excluded_from_refseq: derived from metagenome; fragmented assembly


organism_name: uncultured Anaerotignum sp.


organism_name: uncultured Phascolarctobacterium sp.


organism_name: uncultured Actinomyces sp.


organism_name: uncultured Succinatimonas sp.


organism_name: uncultured Sutterella sp.


organism_name: uncultured Coriobacteriaceae bacterium


organism_name: uncultured Alistipes sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Rhodospirillaceae bacterium


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Lachnobacterium sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Bacteroides sp.


organism_name: uncultured bacterium


organism_name: uncultured Prevotellaceae bacterium


organism_name: uncultured Peptococcaceae bacterium


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Flavobacteriales bacterium


organism_name: uncultured Blautia sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Olsenella sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Prevotella sp.


organism_name: uncultured Eggerthella sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Slackia sp.


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Enterobacteriaceae bacterium


organism_name: uncultured Butyricicoccus sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured bacterium


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Selenomonas sp.


organism_name: uncultured Butyrivibrio sp.


organism_name: uncultured Dialister sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Megasphaera sp.


organism_name: uncultured Rhodocyclaceae bacterium


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Collinsella sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Fusobacterium sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Sutterella sp.


organism_name: uncultured Phascolarctobacterium sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Actinomyces sp.


organism_name: uncultured Acidaminococcus sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Prevotella sp.


organism_name: uncultured Solobacterium sp.


organism_name: uncultured Faecalibacterium sp.


organism_name: uncultured Cryptobacterium sp.


organism_name: uncultured Leuconostoc sp.


organism_name: uncultured bacterium


organism_name: uncultured Roseburia sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Fusobacterium sp.


organism_name: uncultured Megamonas sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Porphyromonas sp.


organism_name: uncultured Coriobacteriaceae bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Blautia sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Spirochaetota bacterium


organism_name: uncultured bacterium


organism_name: uncultured Streptococcus sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Dialister sp.


organism_name: uncultured Clostridium sp.


organism_name: Candidatus Saccharimonadota bacterium


organism_name: uncultured Roseburia sp.


organism_name: uncultured Fusobacterium sp.


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Atopobium sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Pseudomonas sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Robinsoniella sp.


organism_name: uncultured Butyricicoccus sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Slackia sp.


organism_name: uncultured Alistipes sp.


organism_name: uncultured Solobacterium sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Prevotella sp.


organism_name: Candidatus Saccharimonadota bacterium


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Garciella sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Collinsella sp.


organism_name: uncultured Eggerthella sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Fusobacterium sp.


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured bacterium


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Gemella sp.


organism_name: uncultured Olsenella sp.


organism_name: uncultured Pantoea sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Enterobacteriaceae bacterium


organism_name: uncultured Butyricimonas sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Prevotellaceae bacterium


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Prevotella sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Granulicatella sp.


organism_name: Candidatus Saccharimonadota bacterium


organism_name: uncultured Eubacteriales bacterium


organism_name: Candidatus Segatella caccae


organism_name: uncultured Actinomyces sp.


organism_name: uncultured Coriobacteriaceae bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Solobacterium sp.


organism_name: uncultured Dysgonomonas sp.


organism_name: uncultured Slackia sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Peptococcaceae bacterium


organism_name: uncultured Blautia sp.


organism_name: uncultured bacterium


organism_name: uncultured Eggerthella sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Collinsella sp.


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Enterococcus sp.


organism_name: uncultured Megamonas sp.


organism_name: uncultured Anaerococcus sp.


organism_name: uncultured Veillonellaceae bacterium


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Veillonella sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Anaerotruncus sp.


organism_name: Candidatus Proelusimicrobium excrementi


organism_name: uncultured Clostridium sp.


organism_name: Candidatus Saccharimonadota bacterium


organism_name: uncultured Solobacterium sp.


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Rikenellaceae bacterium


organism_name: uncultured Eggerthella sp.


organism_name: uncultured Phascolarctobacterium sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured bacterium


organism_name: uncultured Lachnobacterium sp.


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Actinomyces sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Odoribacter sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Lactobacillus sp.


organism_name: uncultured Porphyromonas sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Roseburia sp.


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Phascolarctobacterium sp.


organism_name: uncultured Butyricicoccus sp.


organism_name: uncultured Streptococcus sp.


organism_name: uncultured Dialister sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Atopobium sp.


organism_name: uncultured Coprococcus sp.


organism_name: uncultured Veillonella sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured Opitutales bacterium


organism_name: uncultured Solobacterium sp.


organism_name: uncultured Prevotellaceae bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: Candidatus Saccharimonadota bacterium


organism_name: uncultured Sutterella sp.


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Actinomyces sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Faecalibacterium sp.


organism_name: uncultured Franconibacter sp.


organism_name: uncultured bacterium


organism_name: Enterobacter hormaechei


organism_name: uncultured Blautia sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Bacteroides sp.


excluded_from_refseq: from large multi-isolate project

organism_name: Enterobacter cloacae


organism_name: Klebsiella aerogenes


organism_name: Enterobacter ludwigii


organism_name: Enterobacter kobei


excluded_from_refseq: contaminated; genome length too large


excluded_from_refseq: unverified source organism


organism_name: Klebsiella pneumoniae


organism_name: Klebsiella variicola


organism_name: Klebsiella quasivariicola


organism_name: Klebsiella quasipneumoniae


excluded_from_refseq: from large multi-isolate project; genome length too large


excluded_from_refseq: contaminated; fragmented assembly; from large multi-isolate project; genome length too large


annotation_name: Annotation submitted by Centre de Biologie pour la Gestion des Populations (CBGP - UMR1062)

infraspecific_name: strain=BuCistrobi

organism_name: Buchnera aphidicola (Cinara strobi)


asm_submitter: JLU

organism_name: Pseudomonas protegens CHA0


asm_submitter: Korea Advanced Institute of Science and technology

isolate: Acetobacterium bakii genome

organism_name: Acetobacterium bakii


asm_submitter: URMITE

infraspecific_name: strain=lk

organism_name: Comamonas sp. lk


excluded_from_refseq: RefSeq annotation failed

infraspecific_name: strain=eg

organism_name: Pedobacter schmidteae


annotation_name: Annotation submitted by CHUV-UNIL

annotation_provider: CHUV-UNIL

asm_submitter: CHUV-UNIL

organism_name: Mycobacterium kansasii


organism_name: Mycobacterium persicum


organism_name: Mycobacterium pseudokansasii


organism_name: Mycobacterium innocens


organism_name: Mycobacterium attenuatum


organism_name: Enterobacter cloacae


excluded_from_refseq: genome length too small; not used as type

organism_name: Clostridium pacaense


organism_name: Treponema pectinovorum


annotation_name: Annotation submitted by CBM

annotation_provider: CBM

asm_submitter: CBM

isolate: Bacillus pumilus NRS576

organism_name: Bacillus safensis


asm_submitter: MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY

organism_name: Pseudomonas viridiflava


excluded_from_refseq: annotation fails completeness check


infraspecific_name: strain=ATCC 700769


asm_submitter: Univeristy of Aberdeen

organism_name: Campylobacter showae


asm_name: CAM

isolate: CAM


annotation_name: Annotation submitted by LEIBNIZ INSTITUTE FOR BALTIC SEA RESEARCH

organism_name: Tritonibacter mobilis


annotation_name: Annotation submitted by Instituto de Microbiologia, Faculdade de Medicina, Universidade de Lisboa

organism_name: Streptococcus canis


excluded_from_refseq: unverified source organism; annotation fails completeness check


excluded_from_refseq: RefSeq annotation failed; annotation fails completeness check


asm_submitter: Institut Pasteur

organism_name: Klebsiella variicola


organism_name: Klebsiella quasipneumoniae subsp. similipneumoniae


isolate: Kocuria sp. PT10

organism_name: Kocuria rhizophila


asm_submitter: INSTITUT PASTEUR

excluded_from_refseq: missing strain identifier

organism_name: Listeria thailandensis


excluded_from_refseq: unverified source organism; fragmented assembly; low quality sequence


excluded_from_refseq: fragmented assembly; genome length too large


excluded_from_refseq: fragmented assembly; genome length too large; low quality sequence


excluded_from_refseq: contaminated


excluded_from_refseq: fragmented assembly


excluded_from_refseq: fragmented assembly; genome length too small


excluded_from_refseq: genome length too small


organism_name: Burkholderia pseudomallei


annotation_name: Annotation submitted by Wellcome Sanger Institute

annotation_provider: Wellcome Sanger Institute

asm_submitter: Wellcome Sanger Institute


annotation_name: Annotation submitted by SC


excluded_from_refseq: contaminated; RefSeq annotation failed; fragmented assembly; genome length too large


excluded_from_refseq: unverified source organism


excluded_from_refseq: contaminated; genome length too large


annotation_name: Annotation submitted by URMITE

annotation_provider: URMITE

organism_name: Clostridium neonatale


annotation_name: Annotation submitted by CBMSO

annotation_provider: CBMSO

asm_name: MHAS

asm_submitter: CBMSO

isolate: Mhassiacum

organism_name: Mycolicibacterium hassiacum DSM 44199


asm_submitter: WAGENINGEN UR

excluded_from_refseq: from large multi-isolate project

organism_name: Escherichia coli


excluded_from_refseq: contaminated; from large multi-isolate project


organism_name: Hafnia paralvei


organism_name: Varibaculum vaginae


organism_name: Rhodoplanes serenus


organism_name: Mycobacterium sp. P7213


organism_name: [Erwinia] mediterraneensis


organism_name: Intestinibacillus sp. Marseille-P6563


excluded_from_refseq: RefSeq annotation failed

organism_name: Maliibacterium massiliense


organism_name: Luxibacter massiliensis


organism_name: Alistipes megaguti


organism_name: Enterococcus mediterraneensis


organism_name: Cutibacterium modestum


organism_name: Arcanobacterium ihumii


organism_name: Clostridium perfringens


organism_name: Romboutsia sp. Marseille-P6047


organism_name: Thermus thermophilus


asm_submitter: SEOUL NAT'L UNIV.

organism_name: Vibrio cholerae


isolate: Seawater


asm_submitter: UANTW

isolate: Lactobacillus rhamnosus GR-1

organism_name: Lacticaseibacillus rhamnosus


organism_name: Vaginisenegalia massiliensis


organism_name: Ruminococcus sp. Marseille-P6503


organism_name: Neoactinobaculum massilliense


organism_name: Gordonibacter sp. Marseille-P4307


organism_name: Acidipropionibacterium timonense


organism_name: Olsenella sp. Marseille-P4559


organism_name: Bacilliculturomica massiliensis


organism_name: Olsenella sp. Marseille-P4518


annotation_name: Annotation submitted by INSTITUT PASTEUR

annotation_provider: INSTITUT PASTEUR

organism_name: Pigmentiphaga humi


organism_name: Prevotella rectalis


organism_name: [Pseudopropionibacterium] massiliense


organism_name: Olivibacter jilunii


asm_submitter: UNIVERSITY OF MELBOURNE

organism_name: Staphylococcus aureus


annotation_name: Annotation submitted by BIOZENTRUM, UNIVERSITY OF BASEL

annotation_provider: BIOZENTRUM, UNIVERSITY OF BASEL

asm_submitter: BIOZENTRUM, UNIVERSITY OF BASEL

organism_name: Klebsiella pneumoniae


organism_name: Escherichia coli


excluded_from_refseq: annotation fails completeness check; many frameshifted proteins


excluded_from_refseq: many frameshifted proteins


excluded_from_refseq: annotation fails completeness check

organism_name: Klebsiella variicola


organism_name: Pseudomonas aeruginosa


organism_name: Acinetobacter baumannii


excluded_from_refseq: contaminated; many frameshifted proteins


organism_name: Klebsiella quasipneumoniae


annotation_name: Annotation submitted by MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

organism_name: Olavius algarvensis spirochete endosymbiont


annotation_name: Annotation submitted by IP

annotation_provider: IP

asm_submitter: IP

organism_name: Streptococcus pyogenes


asm_submitter: SC

organism_name: Burkholderia gladioli


infraspecific_name: strain=LMG 23618

organism_name: Burkholderia oklahomensis


asm_name: Promicromonospora sp PT9

isolate: Promicromonospora sp PT9

organism_name: Promicromonospora panici


asm_submitter: University of Westminster

isolate: Salmonella Dublin

organism_name: Salmonella enterica subsp. enterica serovar Dublin


excluded_from_refseq: genus undefined

organism_name: Rhodobacteraceae bacterium THAF1


annotation_name: Annotation submitted by THE UNIVERSITY OF ADELAIDE

annotation_provider: THE UNIVERSITY OF ADELAIDE

asm_submitter: THE UNIVERSITY OF ADELAIDE

excluded_from_refseq: derived from metagenome

organism_name: Candidatus Defluviicoccus seviourii


organism_name: Filibacter tadaridae


infraspecific_name: strain=CIP 111625

organism_name: Pseudogemmobacter humi


organism_name: Arthrobacter ulcerisalmonis


asm_submitter: NATIONAL VETERINARY INSTITUTE (SVA)

organism_name: Flavobacterium psychrophilum


annotation_name: Annotation submitted by University Hospital Basel

annotation_provider: University Hospital Basel

asm_submitter: University Hospital Basel

organism_name: Lawsonella clevelandensis


excluded_from_refseq: contaminated; unverified source organism; genome length too small

organism_name: Brevundimonas mediterranea


annotation_name: Annotation submitted by UANTW

annotation_provider: UANTW

isolate: Lactobacillus mudanjiangensis AMBF197

organism_name: Lactiplantibacillus mudanjiangensis


excluded_from_refseq: contaminated

isolate: Lactobacillus mudanjiangensis AMBF209


isolate: Lactobacillus mudanjiangensis AMBF249


isolate: Lactobacillus mudanjiangensis


annotation_provider: SC

organism_name: Escherichia coli


excluded_from_refseq: unverified source organism; not used as type

organism_name: Lacrimispora indolis


organism_name: Clostridium carnis


organism_name: Actinobaculum suis


organism_name: Streptococcus pneumoniae


organism_name: Capnocytophaga ochracea


organism_name: Lysinibacillus sphaericus


organism_name: Shigella dysenteriae


excluded_from_refseq: unverified source organism; genome length too large

organism_name: Helicobacter pametensis


organism_name: Bergeyella zoohelcum


organism_name: Bordetella trematum


organism_name: Lactiplantibacillus plantarum


organism_name: Algoriella xinjiangensis


organism_name: Pseudomonas aeruginosa


asm_submitter: CEBITEC

infraspecific_name: strain=Pseudomonas parafragi

organism_name: Pseudomonas bubulae


asm_submitter: Bioplatforms Australia


asm_name: SpeckC

infraspecific_name: strain=Pseudomonas carnis

organism_name: Pseudomonas carnis


organism_name: Streptococcus pyogenes


organism_name: Staphylococcus aureus


annotation_name: Annotation submitted by UNIVERSITY OF VIENNA

annotation_provider: UNIVERSITY OF VIENNA

asm_submitter: UNIVERSITY OF VIENNA

group: archaea

organism_name: Nitrosopumilaceae archaeon


annotation_name: Annotation submitted by VRIJE UNIVERSITEIT BRUSSEL

annotation_provider: VRIJE UNIVERSITEIT BRUSSEL

asm_submitter: VRIJE UNIVERSITEIT BRUSSEL

excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Oenococcus sicerae


organism_name: Klebsiella variicola


organism_name: Klebsiella pneumoniae


organism_name: Escherichia coli


asm_submitter: Keio University, School of Medicine

isolate: Bacteroides vulgatus 81B11

organism_name: Phocaeicola dorei


asm_submitter: Orebro University Hospital

organism_name: Neisseria gonorrhoeae


isolate: Bacteroides uniformis 81A2

organism_name: Bacteroides uniformis ATCC 8492


isolate: Anaerostipes caccae 81B4

organism_name: Anaerostipes caccae L1-92


asm_name: BCassembly

asm_submitter: iBB-IST

organism_name: Aquimarina spinulae


isolate: Parabacteroides goldsteinii 81H9

organism_name: Parabacteroides goldsteinii DSM 19448 = WAL 12034


isolate: Alistipes senegalensis 81E7

organism_name: Alistipes senegalensis


isolate: Bacteroides salyersiae 82A3

organism_name: Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988


isolate: Bacteroides stercoris 82B11

organism_name: Bacteroides stercoris ATCC 43183


isolate: Bacteroides fragilis 82A12

organism_name: Bacteroides fragilis YCH46


isolate: Bacteroides thetaiotaomicron 81H8

organism_name: Bacteroides thetaiotaomicron VPI-5482


isolate: Parabacteroides goldsteinii 82E8


isolate: Massiliomicrobiota timonensis 82D2

organism_name: Massiliimicrobium timonense


isolate: Bacteroides cellulosilyticus 82B7

organism_name: Bacteroides cellulosilyticus WH2


isolate: Bacteroides stercoris 82C1


isolate: Parabacteroides johnsonii 82F11

organism_name: Parabacteroides johnsonii


organism_name: Pseudomonas azotoformans


organism_name: Pseudomonas antarctica


organism_name: Pseudomonas extremorientalis


organism_name: Pseudomonas chlororaphis subsp. chlororaphis


asm_submitter: URMITE

organism_name: Lachnoclostridium sp. Marseille-P6806


organism_name: Pseudomonas cedrina subsp. cedrina


organism_name: Pseudomonas extremaustralis


organism_name: Pseudomonas mucidolens


organism_name: Prevotella marseillensis


organism_name: Pseudomonas tolaasii


organism_name: Pseudomonas gessardii


organism_name: Acinetobacter ihumii


organism_name: Agathobaculum sp. Marseille-P7918


organism_name: Adlercreutzia sp. Marseille-P7992


annotation_name: Annotation submitted by Genoscope CEA

annotation_provider: Genoscope CEA

asm_submitter: Genoscope CEA

organism_name: Ectopseudomonas oleovorans


organism_name: Clostridium transplantifaecale


organism_name: Clostridium rectalis


organism_name: Gulosibacter massiliensis


asm_submitter: Barta

excluded_from_refseq: genome length too large

organism_name: Arthrobacter alpinus


organism_name: Senegalia massiliensis


organism_name: Intestinimonas timonensis


organism_name: Anaerococcus vaginimassiliensis


organism_name: Corynebacterium neomassiliense


asm_submitter: University of Surrey

infraspecific_name: strain=n/a

organism_name: Listeria monocytogenes


organism_name: Gracilibacillus phocaeensis


organism_name: Intestinimonas massiliensis (ex Afouda et al. 2020)


organism_name: Streptococcus intermedius B196


organism_name: Klebsiella terrigena


organism_name: Arthrobacter agilis


organism_name: Tsukamurella paurometabola


organism_name: Burkholderia gladioli


organism_name: Burkholderia vietnamiensis


excluded_from_refseq: unverified source organism

organism_name: Burkholderia anthina


organism_name: Burkholderia ambifaria


organism_name: Mycoplasmopsis caviae


organism_name: Clostridioides difficile


asm_submitter: INSTITUT PASTEUR

organism_name: Paracoccus haematequi


infraspecific_name: strain=CIP 111628

organism_name: Devosia equisanguinis


organism_name: Thiomonas sp. Bio17B3


organism_name: Thiomonas sp. Sup16B3


organism_name: Thiomonas sp. OC7


asm_name: RSHA

asm_submitter: ANSES

isolate: RSHA

organism_name: Chlamydia buteonis


organism_name: Thiomonas sp. CB2


isolate: Dg1 Dg nod2

organism_name: Candidatus Protofrankia datiscae


asm_name: Dd1 Dg vc

isolate: Dd1 Dg vc

organism_name: Candidatus Protofrankia californiensis


organism_name: Candidatus Frankia meridionalis


organism_name: Protofrankia symbiont of Coriaria ruscifolia


organism_name: Protofrankia symbiont of Coriaria myrtifolia


asm_name: Dd1 Dg nod

isolate: Dd1 Dg nod


excluded_from_refseq: fragmented assembly; genome length too large; low quality sequence


asm_submitter: UNIVERSITY MEDICAL CENTER UTRECHT

organism_name: Enterococcus faecium


asm_submitter: SC

organism_name: Morganella morganii


excluded_from_refseq: RefSeq annotation failed; annotation fails completeness check; many frameshifted proteins

organism_name: Salmonella enterica subsp. arizonae


organism_name: Salmonella enterica subsp. enterica serovar Daytona


organism_name: Staphylococcus aureus


organism_name: Klebsiella oxytoca


organism_name: Legionella pneumophila


organism_name: Klebsiella pneumoniae


organism_name: Shimwellia blattae


organism_name: Escherichia coli


infraspecific_name: strain=NCTC 10904

organism_name: Streptococcus sanguinis


organism_name: Staphylococcus saprophyticus


organism_name: Streptococcus dysgalactiae subsp. dysgalactiae


isolate: Cj1 Dg nod

organism_name: Candidatus Protofrankia datiscae


organism_name: Frankia symbiont of Coriaria nepalensis


isolate: Cj1 Dg vc


isolate: Dg1 Dg nod


organism_name: Citrobacter freundii


organism_name: Klebsiella aerogenes


organism_name: Serratia odorifera


organism_name: Yersinia intermedia


organism_name: Lelliottia amnigena


organism_name: Kluyvera intermedia


excluded_from_refseq: RefSeq annotation failed; many frameshifted proteins

organism_name: Salmonella bongori


organism_name: Atlantibacter hermannii


organism_name: Staphylococcus aureus


organism_name: Salmonella enterica subsp. enterica


organism_name: Salmonella enterica subsp. salamae