organism_name: uncultured Lachnospiraceae bacterium


asm_submitter: Institut National pour la Recherche Agronomique (FRANCE)

assembly_level: Contig

assembly_type: haploid

excluded_from_refseq: derived from metagenome; genus undefined

genome_rep: Full

group: bacteria

organism_name: uncultured Bacilli bacterium

release_type: Major

version_status: latest


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Oscillospiraceae bacterium


excluded_from_refseq: derived from metagenome

organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Acetatifactor sp.


organism_name: uncultured Akkermansia sp.


organism_name: uncultured Phascolarctobacterium sp.


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Helicobacteraceae bacterium


organism_name: uncultured Anaeroplasmataceae bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Mediterranea massiliensis


organism_name: uncultured Alistipes sp.


organism_name: uncultured Anaeroplasma sp.


organism_name: uncultured Ruminiclostridium sp.


group: archaea

organism_name: Methanosphaera cuniculi

paired_asm_comp: identical


organism_name: uncultured Eisenbergiella sp.


organism_name: uncultured Bacilli bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Atopobiaceae bacterium


organism_name: uncultured Akkermansia sp.


excluded_from_refseq: contaminated; derived from metagenome


organism_name: Empedobacter stercoris


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Acinetobacter pseudolwoffii


organism_name: uncultured Pseudomonadaceae bacterium


organism_name: Bacteroides thetaiotaomicron


organism_name: uncultured Acetatifactor sp.


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Monoglobus sp.


organism_name: uncultured Marvinbryantia sp.


organism_name: uncultured Ruminiclostridium sp.


organism_name: uncultured Giesbergeria sp.


organism_name: Macellibacteroides fermentans


organism_name: uncultured Bacilli bacterium


organism_name: uncultured Clostridia bacterium


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Akkermansia muciniphila


organism_name: uncultured Marinospirillum sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Acinetobacter sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: Muribaculum gordoncarteri


organism_name: uncultured Parasutterella sp.


organism_name: uncultured Eubacteriaceae bacterium


organism_name: uncultured Atopobiaceae bacterium


organism_name: uncultured Acetatifactor sp.


organism_name: Phocaeicola dorei


organism_name: Campylobacter cuniculorum


organism_name: Staphylococcus equorum


excluded_from_refseq: RefSeq annotation failed; derived from metagenome

organism_name: uncultured Dysosmobacter sp.


organism_name: uncultured Peptococcaceae bacterium


organism_name: uncultured Bacilli bacterium


organism_name: uncultured Clostridia bacterium


organism_name: Alistipes communis


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Flavobacterium sp.


organism_name: uncultured Eggerthellaceae bacterium


organism_name: uncultured Paenalcaligenes sp.


organism_name: uncultured Pseudomonadaceae bacterium


organism_name: Bacteroides uniformis


organism_name: uncultured Acetatifactor sp.


organism_name: uncultured Atopobiaceae bacterium


organism_name: uncultured Phocaeicola sp.


organism_name: uncultured Akkermansia sp.


organism_name: uncultured Peptococcaceae bacterium


organism_name: Butyricimonas virosa


organism_name: uncultured Bacilli bacterium


organism_name: uncultured Coprococcus sp.


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Eisenbergiella sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Acinetobacter sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: Corynebacterium casei


organism_name: uncultured Roseburia sp.


organism_name: uncultured Ruminococcus sp.


organism_name: Mammaliicoccus vitulinus


organism_name: uncultured Acetatifactor sp.


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Ruminiclostridium sp.


organism_name: Alistipes finegoldii


organism_name: uncultured Paenochrobactrum sp.


organism_name: uncultured Rikenella sp.


organism_name: uncultured Bacilli bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Akkermansia sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Methanobrevibacter sp.


excluded_from_refseq: contaminated; derived from metagenome; genome length too large

organism_name: Akkermansia muciniphila


organism_name: uncultured Monoglobus sp.


organism_name: uncultured Gemmiger sp.


organism_name: uncultured Lachnospira sp.


organism_name: uncultured Roseburia sp.


organism_name: uncultured Halomonas sp.


organism_name: uncultured Acinetobacter sp.


organism_name: uncultured Aliarcobacter sp.


organism_name: uncultured Muribaculaceae bacterium


organism_name: Bifidobacterium magnum


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Bacilli bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Acetatifactor sp.


organism_name: uncultured Phascolarctobacterium sp.


organism_name: uncultured Alistipes sp.


organism_name: uncultured Akkermansia sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Anaeroplasmataceae bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Ruminiclostridium sp.


organism_name: uncultured Monoglobus sp.


organism_name: Enterococcus aquimarinus


organism_name: uncultured Eisenbergiella sp.


organism_name: Bacteroides graminisolvens


organism_name: uncultured Flavobacterium sp.


organism_name: uncultured Sphingobacterium sp.


organism_name: uncultured Eubacteriaceae bacterium


organism_name: uncultured Bacilli bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Pseudomonadaceae bacterium


organism_name: uncultured Paenalcaligenes sp.


organism_name: uncultured Spirochaetaceae bacterium


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Acetatifactor sp.


organism_name: uncultured Marvinbryantia sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Phascolarctobacterium sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Akkermansia sp.


organism_name: uncultured Wohlfahrtiimonas sp.


organism_name: uncultured Muribaculum sp.


organism_name: Providencia huaxiensis


organism_name: uncultured Dysosmobacter sp.


organism_name: uncultured Flavobacterium sp.


organism_name: uncultured Bacilli bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Enterobacteriaceae bacterium


organism_name: uncultured Jeotgalicoccus sp.


organism_name: uncultured Methylophaga sp.


organism_name: uncultured Alistipes sp.


organism_name: uncultured Atopobiaceae bacterium


organism_name: uncultured Mailhella sp.


organism_name: uncultured Gemmiger sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Acetatifactor sp.


organism_name: Parabacteroides distasonis


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Eisenbergiella sp.


organism_name: uncultured Pseudomonadaceae bacterium


organism_name: uncultured Bacilli bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Erysipelothrix sp.


organism_name: uncultured Akkermansia sp.


organism_name: uncultured Flavobacterium sp.


organism_name: uncultured Microbacterium sp.


organism_name: uncultured Oligella sp.


organism_name: uncultured Ignatzschineria sp.


organism_name: uncultured Paenalcaligenes sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Eggerthellaceae bacterium


organism_name: uncultured Coprococcus sp.


asm_submitter: EMG


organism_name: uncultured Dorea sp.


organism_name: uncultured Parabacteroides sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: Bacteroides acidifaciens


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Blautia sp.


organism_name: uncultured Turicibacter sp.


excluded_from_refseq: contaminated; derived from metagenome; genus undefined


organism_name: uncultured Lactobacillus sp.


organism_name: uncultured Peptococcaceae bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: uncultured Flavonifractor sp.


organism_name: uncultured Clostridia bacterium


organism_name: uncultured bacterium


organism_name: uncultured Muribaculaceae bacterium


organism_name: Bacteroides uniformis


organism_name: uncultured Lachnoclostridium sp.


organism_name: uncultured Eggerthellaceae bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Dorea sp.


organism_name: uncultured Eubacterium sp.


excluded_from_refseq: contaminated; derived from metagenome; genome length too small

organism_name: Acutalibacter muris


organism_name: uncultured Bacillota bacterium


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: uncultured Roseburia sp.


excluded_from_refseq: unverified source organism; derived from metagenome; genus undefined

organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Pseudoflavonifractor sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined


organism_name: uncultured Collinsella sp.


organism_name: uncultured Clostridiaceae bacterium


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Alistipes sp.


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Odoribacter sp.


organism_name: Escherichia coli


organism_name: uncultured Parabacteroides sp.


organism_name: uncultured Mycoplasma sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Anaerotruncus sp.


organism_name: uncultured bacterium


organism_name: uncultured Eubacterium sp.


organism_name: Bacteroides uniformis


organism_name: Parabacteroides goldsteinii


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Pseudoflavonifractor sp.


organism_name: uncultured Sutterellaceae bacterium


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Lactobacillus sp.


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Eubacteriaceae bacterium


organism_name: uncultured Roseburia sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Bacteroides acidifaciens


organism_name: uncultured bacterium


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Anaerotruncus sp.


organism_name: uncultured Lachnoclostridium sp.


organism_name: Bacteroides caecimuris


organism_name: Lactobacillus intestinalis


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: Acetatifactor muris


organism_name: Acutalibacter muris


organism_name: uncultured Clostridium sp.


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Clostridiaceae bacterium


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Clostridia bacterium


organism_name: Fusobacterium varium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Alistipes sp.


organism_name: Bacteroides salyersiae


organism_name: uncultured Butyricicoccus sp.


organism_name: Staphylococcus cohnii


organism_name: uncultured Eubacteriaceae bacterium


organism_name: uncultured bacterium


organism_name: Alistipes finegoldii


organism_name: Bacteroides thetaiotaomicron


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: Faecalibaculum rodentium


organism_name: uncultured Eubacterium sp.


organism_name: Bifidobacterium pseudolongum


organism_name: uncultured Clostridium sp.


organism_name: uncultured Acetatifactor sp.


organism_name: uncultured Thomasclavelia sp.


organism_name: uncultured Clostridia bacterium


organism_name: Anaerotruncus colihominis


organism_name: Parabacteroides distasonis


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Clostridiaceae bacterium


organism_name: uncultured Roseburia sp.


organism_name: Bacteroides acidifaciens


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Blautia sp.


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Helicobacter sp.


organism_name: uncultured Flavonifractor sp.


organism_name: uncultured Alistipes sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Enterococcus faecalis


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Dorea sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Mollicutes bacterium


organism_name: Bacteroides stercoris


organism_name: uncultured Asinibacterium sp.


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Lachnoclostridium sp.


organism_name: uncultured Enterorhabdus sp.


organism_name: uncultured Pseudoflavonifractor sp.


organism_name: uncultured Sporosarcina sp.


organism_name: uncultured Roseburia sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Coriobacteriaceae bacterium


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: Acutalibacter muris


organism_name: uncultured Lachnospiraceae bacterium


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genus undefined


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured bacterium


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Mucispirillum sp.


organism_name: Psychrobacter pasteurii


organism_name: Bacteroides cellulosilyticus


organism_name: uncultured Hungatella sp.


organism_name: Lactobacillus taiwanensis


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Clostridiaceae bacterium


organism_name: Akkermansia muciniphila


organism_name: uncultured Lachnoclostridium sp.


organism_name: uncultured Dorea sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Lachnotalea sp.


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Sutterellaceae bacterium


organism_name: Bacteroides acidifaciens


organism_name: uncultured Alistipes sp.


organism_name: Bacteroides ovatus


organism_name: uncultured bacterium


organism_name: Lactobacillus johnsonii


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Roseburia sp.


organism_name: uncultured Sutterella sp.


organism_name: Enterococcus hirae


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Lactobacillus sp.


organism_name: uncultured Eubacterium sp.


organism_name: Bacteroides bouchesdurhonensis


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Blautia sp.


organism_name: uncultured Prevotellaceae bacterium


organism_name: Bacteroides thetaiotaomicron


organism_name: Parabacteroides merdae


organism_name: Butyricimonas virosa


organism_name: Dielma fastidiosa


organism_name: [Clostridium] scindens


organism_name: Bacteroides caccae


organism_name: Segatella copri


organism_name: uncultured Enterorhabdus sp.


organism_name: uncultured Rikenellaceae bacterium


organism_name: uncultured Alistipes sp.


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Bacteroides sp.


organism_name: Bilophila wadsworthia


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Sutterellaceae bacterium


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Eggerthellaceae bacterium


organism_name: Muribaculum intestinale


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured bacterium


organism_name: uncultured Mycoplasma sp.


organism_name: uncultured Pseudoflavonifractor sp.


organism_name: uncultured Acetatifactor sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Prevotella sp.


organism_name: uncultured Alistipes sp.


organism_name: uncultured Flavonifractor sp.


organism_name: uncultured Clostridia bacterium


organism_name: Escherichia coli


organism_name: Akkermansia muciniphila


organism_name: uncultured Lactobacillus sp.


organism_name: uncultured Clostridiaceae bacterium


organism_name: uncultured Roseburia sp.


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Lactobacillus johnsonii


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: Vagococcus fluvialis


organism_name: uncultured Clostridium sp.


organism_name: uncultured bacterium


organism_name: uncultured Turicibacter sp.


organism_name: uncultured Hungatella sp.


organism_name: uncultured Ralstonia sp.


organism_name: Helicobacter hepaticus


organism_name: Faecalibaculum rodentium


organism_name: uncultured Clostridia bacterium


organism_name: Bacillus cereus


organism_name: uncultured Dorea sp.


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Eggerthellaceae bacterium


organism_name: uncultured Methylovirgula sp.


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: Bacteroides acidifaciens


organism_name: uncultured Coriobacteriaceae bacterium


organism_name: uncultured bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Pseudoflavonifractor sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: uncultured Alistipes sp.


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Hungatella sp.


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Oscillibacter sp.


organism_name: Escherichia coli


organism_name: Muribaculum intestinale


organism_name: Lactobacillus intestinalis


organism_name: uncultured Clostridiaceae bacterium


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Eubacterium sp.


organism_name: Bacteroides ovatus


organism_name: uncultured Anaerotruncus sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Proteus mirabilis


organism_name: uncultured Eggerthellaceae bacterium


organism_name: uncultured bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Caryophanales bacterium


organism_name: uncultured Lachnoclostridium sp.


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: uncultured Roseburia sp.


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Peptococcaceae bacterium


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Neglectibacter sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Microbacterium sp.


organism_name: uncultured Clostridiaceae bacterium


organism_name: uncultured Eggerthellaceae bacterium


organism_name: uncultured Lactobacillus sp.


organism_name: uncultured bacterium


organism_name: Parvibacter caecicola


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Dorea sp.


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Clostridia bacterium


organism_name: Akkermansia muciniphila


organism_name: uncultured Odoribacter sp.


organism_name: Klebsiella pneumoniae


organism_name: uncultured Bacillota bacterium


organism_name: Holdemania filiformis


organism_name: uncultured Flavonifractor sp.


organism_name: uncultured Lachnoclostridium sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Bradyrhizobium sp.


organism_name: uncultured Butyricimonas sp.


organism_name: [Clostridium] symbiosum


organism_name: uncultured Eggerthellaceae bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Mycoplasma sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Alistipes sp.


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Roseburia sp.


organism_name: uncultured Parabacteroides sp.


organism_name: Enterococcus faecalis


organism_name: uncultured Mucispirillum sp.


organism_name: Acutalibacter muris


organism_name: uncultured Odoribacter sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Faecalibaculum sp.


organism_name: Parvibacter caecicola


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: uncultured bacterium


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Candidatus Melainabacteria bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Coriobacteriaceae bacterium


organism_name: uncultured Lactobacillus sp.


organism_name: uncultured Alistipes sp.


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Dorea sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Acutalibacter muris


organism_name: uncultured Hungatella sp.


organism_name: uncultured Caryophanales bacterium


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Blautia sp.


organism_name: uncultured Roseburia sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: Bifidobacterium pseudolongum


organism_name: uncultured Muribaculaceae bacterium


organism_name: Bacteroides nordii


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured bacterium


organism_name: uncultured Bacteroides sp.


organism_name: Bacteroides acidifaciens


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Odoribacter sp.


organism_name: Thomasclavelia cocleata


organism_name: uncultured Angelakisella sp.


organism_name: uncultured Rikenella sp.


organism_name: uncultured Lachnospiraceae bacterium


excluded_from_refseq: contaminated; unverified source organism; derived from metagenome

organism_name: uncultured Lactobacillus sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Enterorhabdus sp.


organism_name: uncultured Flavonifractor sp.


excluded_from_refseq: derived from metagenome

organism_name: Akkermansia muciniphila


organism_name: uncultured Asinibacterium sp.


organism_name: uncultured Hungatella sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: Acutalibacter muris


organism_name: uncultured Alistipes sp.


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Mycoplasma sp.


organism_name: [Clostridium] innocuum


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: uncultured Methylovirgula sp.


organism_name: uncultured bacterium


organism_name: Bacteroides intestinalis


organism_name: uncultured Oscillibacter sp.


organism_name: Parabacteroides goldsteinii


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Roseburia sp.


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Paraprevotella sp.


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Flavonifractor sp.


organism_name: Corynebacterium stationis


organism_name: uncultured Odoribacter sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Parvibacter sp.


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Caryophanales bacterium


organism_name: uncultured Lactobacillus sp.


organism_name: uncultured Mucispirillum sp.


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured bacterium


organism_name: uncultured Dorea sp.


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Lachnoclostridium sp.


organism_name: Muribaculum intestinale


organism_name: uncultured Roseburia sp.


annotation_name: Annotation submitted by UTRECHT UNIVERSITY

annotation_provider: UTRECHT UNIVERSITY

asm_submitter: UTRECHT UNIVERSITY

assembly_level: Complete Genome

organism_name: Staphylococcus pseudintermedius


organism_name: Adlercreutzia equolifaciens


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Flavonifractor sp.


organism_name: uncultured Rikenellaceae bacterium


excluded_from_refseq: contaminated; derived from metagenome


organism_name: uncultured Alistipes sp.


organism_name: Blautia producta


organism_name: [Clostridium] symbiosum


organism_name: Eubacterium plexicaudatum


organism_name: uncultured Pseudoflavonifractor sp.


organism_name: uncultured bacterium


organism_name: uncultured Hungatella sp.


organism_name: Clostridioides difficile


organism_name: uncultured Clostridiaceae bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Angelakisella sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Lachnoclostridium sp.


organism_name: uncultured Eggerthellaceae bacterium


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: uncultured Dorea sp.


organism_name: uncultured Muribaculaceae bacterium


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Thomasclavelia cocleata


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured bacterium


organism_name: Bacteroides acidifaciens


organism_name: Enterococcus gallinarum


organism_name: Aerococcus urinaeequi


organism_name: uncultured Clostridium sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Alistipes sp.


organism_name: uncultured Parvibacter sp.


organism_name: uncultured Butyricicoccus sp.


organism_name: Enterococcus hirae


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Roseburia sp.


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Pseudoflavonifractor sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Lachnoclostridium sp.


organism_name: uncultured Robinsoniella sp.


organism_name: uncultured Akkermansia sp.


organism_name: uncultured Hungatella sp.


organism_name: Bifidobacterium pseudolongum


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Dubosiella newyorkensis


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: uncultured Lactobacillus sp.


organism_name: Mucispirillum schaedleri


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Odoribacter sp.


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Butyricicoccus sp.


organism_name: uncultured Alistipes sp.


organism_name: uncultured Pseudoflavonifractor sp.


organism_name: uncultured Clostridia bacterium


organism_name: Acutalibacter muris


organism_name: uncultured bacterium


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Dorea sp.


organism_name: Proteus mirabilis


organism_name: uncultured Eggerthellaceae bacterium


organism_name: uncultured Porphyromonadaceae bacterium


excluded_from_refseq: RefSeq annotation failed; derived from metagenome

organism_name: uncultured Bacteroides sp.


organism_name: Lactobacillus johnsonii


organism_name: uncultured Clostridium sp.


organism_name: [Clostridium] innocuum


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Roseburia sp.


organism_name: uncultured Enterorhabdus sp.


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Pseudomonadota bacterium


organism_name: uncultured bacterium


organism_name: uncultured Lactobacillus sp.


organism_name: uncultured Bacillota bacterium


organism_name: Akkermansia muciniphila


organism_name: uncultured Lachnoclostridium sp.


organism_name: uncultured Prevotella sp.


organism_name: Bifidobacterium pseudolongum


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Mesorhizobium sp.


organism_name: uncultured Peptococcaceae bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Mycobacterium sp.


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Caryophanales bacterium


organism_name: uncultured Dorea sp.


organism_name: uncultured Eggerthellaceae bacterium


organism_name: uncultured Odoribacter sp.


organism_name: uncultured Hungatella sp.


organism_name: Thomasclavelia cocleata


excluded_from_refseq: contaminated; annotation fails MAG completeness check; derived from metagenome

organism_name: uncultured Acetatifactor sp.


organism_name: uncultured Prevotella sp.


organism_name: Anaerocolumna aminovalerica


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured bacterium


organism_name: uncultured Mycoplasma sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Roseburia sp.


organism_name: uncultured Enterorhabdus sp.


organism_name: uncultured Alistipes sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Eggerthellaceae bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Mycoplasmatota bacterium


organism_name: Parabacteroides goldsteinii


organism_name: uncultured Lachnoclostridium sp.


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Eubacteriaceae bacterium


organism_name: uncultured Hungatella sp.


organism_name: uncultured bacterium


organism_name: Lactobacillus johnsonii


organism_name: Hungatella hathewayi


organism_name: uncultured Pseudoflavonifractor sp.


organism_name: Bacteroides cellulosilyticus


organism_name: Thomasclavelia cocleata


organism_name: Enterococcus faecalis


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Bacillota bacterium


organism_name: Bacteroides fragilis


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Enterorhabdus sp.


organism_name: uncultured Dorea sp.


organism_name: Faecalibacterium prausnitzii


organism_name: uncultured Turicibacter sp.


organism_name: Murimonas intestini


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Roseburia sp.


organism_name: Parasutterella excrementihominis


organism_name: uncultured Lachnoclostridium sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Alistipes sp.


organism_name: uncultured bacterium


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Clostridiaceae bacterium


organism_name: uncultured Blautia sp.


organism_name: uncultured Bacillota bacterium


organism_name: Lactococcus garvieae


organism_name: uncultured Anaerotruncus sp.


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Acetatifactor sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Eubacterium sp.


organism_name: Enterococcus avium


organism_name: uncultured Dorea sp.


asm_submitter: Universitaetsklinikum Freiburg

excluded_from_refseq: from large multi-isolate project

organism_name: Klebsiella pneumoniae


excluded_from_refseq: unverified source organism; from large multi-isolate project


asm_submitter: UNIVERSITY MEDICAL CENTER UTRECHT

organism_name: Enterococcus faecalis


asm_submitter: University of Oslo

organism_name: Escherichia coli


asm_submitter: stanford university school of medicine


organism_name: Candidatus Fimisoma avicola


organism_name: Candidatus Barnesiella excrementavium


organism_name: Enterococcus cecorum


organism_name: Candidatus Alistipes excrementavium


organism_name: uncultured Coprobacter sp.


organism_name: uncultured Tidjanibacter sp.


organism_name: Limosilactobacillus reuteri


organism_name: Candidatus Ruminococcus avistercoris


organism_name: Merdimonas faecis


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Bacilli bacterium


organism_name: Candidatus Scatocola faecipullorum


organism_name: Candidatus Fimousia stercorigallinarum


organism_name: Odoribacter splanchnicus


organism_name: Parasutterella excrementihominis


organism_name: Candidatus Mediterraneibacter avicola


organism_name: Bacteroides clarus


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Oscillospiraceae bacterium


organism_name: Campylobacter coli


organism_name: Candidatus Merdibacter merdigallinarum


organism_name: Barnesiella viscericola


organism_name: uncultured Emergencia sp.


organism_name: Rikenella microfusus


organism_name: Candidatus Choladocola avistercoris


organism_name: uncultured Deferribacterales bacterium


organism_name: Lactobacillus gallinarum


organism_name: Candidatus Fimiplasma intestinipullorum


organism_name: Phocaeicola dorei


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Bacilli bacterium


organism_name: Candidatus Faecousia faecigallinarum


organism_name: Ligilactobacillus salivarius


organism_name: Helicobacter pullorum


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Alistipes communis


organism_name: Candidatus Gallimonas intestinavium


organism_name: Campylobacter jejuni


organism_name: Massilicoli timonensis


organism_name: Candidatus Limihabitans stercoravium


organism_name: uncultured Oscillospiraceae bacterium


organism_name: Escherichia coli


organism_name: uncultured Bacillota bacterium


organism_name: Candidatus Scatenecus faecavium


organism_name: uncultured Turicimonas sp.


organism_name: Lactobacillus johnsonii


organism_name: uncultured Clostridia bacterium


organism_name: Candidatus Alistipes merdavium


organism_name: Candidatus Scybalosoma faecavium


organism_name: Candidatus Ureaplasma intestinipullorum


organism_name: Candidatus Blautia intestinigallinarum


organism_name: Phascolarctobacterium faecium


organism_name: Candidatus Caccosoma faecigallinarum


organism_name: Candidatus Scatomonas merdigallinarum


organism_name: Candidatus Fimenecus excrementavium


organism_name: uncultured Bacilli bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Parabacteroides distasonis


organism_name: Candidatus Faeciplasma avium


organism_name: Bacteroides uniformis


organism_name: Candidatus Tidjanibacter gallistercoris


organism_name: Candidatus Onthocola gallistercoris


organism_name: Parabacteroides merdae


organism_name: Candidatus Faeciplasma pullistercoris


organism_name: uncultured Clostridia bacterium


organism_name: Candidatus Mailhella merdigallinarum


organism_name: Candidatus Faecousia gallistercoris


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Merdimonas sp.


organism_name: uncultured Parabacteroides sp.


organism_name: Candidatus Butyricimonas faecavium


organism_name: Candidatus Anaerobutyricum avicola


organism_name: Candidatus Avirikenella pullistercoris


organism_name: Candidatus Faecousia faecipullorum


organism_name: Lactobacillus crispatus


organism_name: Candidatus Fimimorpha faecalis


organism_name: Candidatus Anaerostipes avistercoris


organism_name: Akkermansia muciniphila


organism_name: Limosilactobacillus vaginalis


organism_name: Candidatus Faecenecus gallistercoris


organism_name: uncultured Mediterraneibacter sp.


organism_name: Candidatus Bariatricus faecipullorum


organism_name: Alistipes dispar


organism_name: uncultured Clostridia bacterium


organism_name: Parabacteroides johnsonii


organism_name: uncultured Coprobacter sp.


organism_name: uncultured Rikenellaceae bacterium


organism_name: Turicimonas muris


organism_name: Candidatus Alistipes intestinipullorum


organism_name: Candidatus Alistipes avicola


organism_name: uncultured Bacilli bacterium


organism_name: Candidatus Alistipes cottocaccae


organism_name: Streptococcus alactolyticus


organism_name: Alistipes onderdonkii


organism_name: uncultured Parabacteroides sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Candidatus Coprovivens excrementavium


organism_name: Bacteroides fragilis


organism_name: Barnesiella intestinihominis


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; genome length too small

organism_name: Butyricimonas faecihominis


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Romboutsia sp.


organism_name: uncultured Negativibacillus sp.


organism_name: Candidatus Alistipes stercorigallinarum


organism_name: Candidatus Coproplasma stercoripullorum


organism_name: Acidaminococcaceae bacterium


organism_name: Candidatus Fimimonas gallinarum


organism_name: uncultured Bacilli bacterium


organism_name: Thomasclavelia spiroformis


organism_name: Butyricimonas paravirosa


organism_name: Candidatus Scatovivens faecipullorum


organism_name: Candidatus Alistipes merdipullorum


organism_name: uncultured Lachnospiraceae bacterium


excluded_from_refseq: contaminated

isolate: Fecal samples

organism_name: Escherichia coli


excluded_from_refseq: RefSeq annotation failed


asm_submitter: CENTRE FOR GENOMIC RESEARCH UNIVERSITY OF LIVERPOOL

assembly_level: Scaffold

organism_name: Buchnera aphidicola


asm_submitter: UMR 1137 IAME

infraspecific_name: strain=ROAR-371 / O148:H8 / fimH31 / 448 (ST Warwick)

isolate: Faeces


infraspecific_name: strain=ROAR-358 / O75:H5 / fimH422 / 1064 (ST Warwick)


infraspecific_name: strain=ROAR-356 / O18:H7 / fimH15 / 95 (ST Warwick)


infraspecific_name: strain=ROAR-410 / O11:H25 / fimH34 / 58 (ST Warwick)


infraspecific_name: strain=ROAR-342 / O6:H31 / fimH2 / 127 (ST Warwick)


infraspecific_name: strain=ROAR-402 / O6:H1 / fimH10 / 73 (ST Warwick)


infraspecific_name: strain=ROAR-375 / O10:H4 / fimH168 / 10 (ST Warwick)


infraspecific_name: strain=ROAR-398 / O12:H4 / fimH27 / 10 (ST Warwick)


infraspecific_name: strain=ROAR-404 / O117:H40 / fimH24 / 10 (ST Warwick)


infraspecific_name: strain=ROAR-411 / O28ab:H9 / fimH24 / 10 (ST Warwick)


infraspecific_name: strain=ROAR-400 / O8:H25 / fimH32 / 58 (ST Warwick)


annotation_name: Annotation submitted by UMR5557

asm_name: AcoPraII-Sp

isolate: AcoPraII-Sp

organism_name: Frankia sp. AcoPraII.1


infraspecific_name: strain=ROAR-437 / O88:H6 / fimH54 / 10 (ST Warwick)


infraspecific_name: strain=ROAR-357 / O7:H45 / fimH44 / 62 (ST Warwick)


infraspecific_name: strain=ROAR-417 / O101:H9 / fimH54 / 10 (ST Warwick)


infraspecific_name: strain=ROAR-394 / O5:H10 / ND / - (ST Warwick)


infraspecific_name: strain=ROAR-396 / O23:H15 / fimH48 / 70 (ST Warwick)


infraspecific_name: strain=ROAR-372 / O54:H45 / fimH5 / 491 (ST Warwick)


infraspecific_name: strain=ROAR-364 / O2:H4 / fimH30 / 95 (ST Warwick)


infraspecific_name: strain=ROAR-416 / O18:H7 / fimH15 / 95 (ST Warwick)


infraspecific_name: strain=ROAR-377 / O2:H4 / fimH27 / 95 (ST Warwick)


infraspecific_name: strain=ROAR-414 / O19:H4 / fimH54 / 405 (ST Warwick)


infraspecific_name: strain=ROAR-368 / O8:H8 / fimH1210 / 1071 (ST Warwick)


infraspecific_name: strain=ROAR-383 / O4:H4 / fimH24 / 1072 (ST Warwick)


infraspecific_name: strain=ROAR-403 / O146:H21 / fimH32 / 829 (ST Warwick)


excluded_from_refseq: unverified source organism

infraspecific_name: strain=ROAR-354 / O53:H56 / fimH625 / 8819 (ST Warwick)


infraspecific_name: strain=ROAR-389 / O83:H33 / fimH13 / 567 (ST Warwick)


infraspecific_name: strain=ROAR-433 / O82:H31 / fimH25 / 1297 (ST Warwick)


infraspecific_name: strain=ROAR-395 / O12:H4 / fimH27 / 10 (ST Warwick)


infraspecific_name: strain=ROAR-406 / O132:H28 / fimH54 / 1078 (ST Warwick)


infraspecific_name: strain=ROAR-363 / O126:H14 / fimH1027 / 1065 (ST Warwick)


infraspecific_name: strain=ROAR-366 / Unknown:H12 / fimH27 / 1075 (ST Warwick)


infraspecific_name: strain=ROAR-340 / O129:H4 / fimH21 / 357 (ST Warwick)


infraspecific_name: strain=ROAR-436 / O1:H7 / fimH30 / 95 (ST Warwick)


infraspecific_name: strain=ROAR-434 / O183:H18 / fimH97 / 657 (ST Warwick)


infraspecific_name: strain=ROAR-428 / O112:H2 / fimH25 / 388 (ST Warwick)


infraspecific_name: strain=ROAR-425 / O23:H4 / fimH123 / 1882 (ST Warwick)


infraspecific_name: strain=ROAR-349 / O1:H7 / fimH41 / 59 (ST Warwick)


infraspecific_name: strain=ROAR-422 / O183:H18 / fimH97 / 657 (ST Warwick)


infraspecific_name: strain=ROAR-420 / O15:H33 / fimH41 / 93 (ST Warwick)


infraspecific_name: strain=ROAR-352 / Onovel6:H2 / fimH39 / 67 (ST Warwick)


infraspecific_name: strain=ROAR-348 / O17:H18 / fimH27 / 69 (ST Warwick)


infraspecific_name: strain=ROAR-386 / O45:H7 / fimH54 / 95 (ST Warwick)


infraspecific_name: strain=ROAR-355 / O18:H7 / fimH15 / 95 (ST Warwick)


infraspecific_name: strain=ROAR-345 / O146:H10 / fimH32 / - (ST Warwick)


infraspecific_name: strain=ROAR-361 / O40:H12 / ND / 399 (ST Warwick)


infraspecific_name: strain=ROAR-381 / O2:H48 / fimH1515 / 10 (ST Warwick)


annotation_name: Annotation submitted by spanish research council (csic), instituto de la grasa

excluded_from_refseq: contaminated; unverified source organism; genome length too small

organism_name: Lactiplantibacillus pentosus


asm_submitter: national institute of biology

organism_name: Vibrio campbellii


organism_name: Vibrio parahaemolyticus


asm_submitter: Ghent University

infraspecific_name: strain=LMG 1352

isolate: Rodriguez-Navarro A4-1

organism_name: Bombella apis


excluded_from_refseq: genome length too large


infraspecific_name: strain=LMG 30241


infraspecific_name: strain=LMG 32855

organism_name: Hafnia alvei


infraspecific_name: strain=LMG 32856


organism_name: uncultured Clostridia bacterium


infraspecific_name: strain=LMG 32862

organism_name: Lactococcus lactis


infraspecific_name: strain=LMG 32864


infraspecific_name: strain=LMG 32859


infraspecific_name: strain=LMG 32857


infraspecific_name: strain=LMG 30244

organism_name: Secundilactobacillus kimchicus


infraspecific_name: strain=LMG 32865


infraspecific_name: strain=LMG 30243


infraspecific_name: strain=LMG 32866


infraspecific_name: strain=LMG 32861


infraspecific_name: strain=LMG 32863


infraspecific_name: strain=LMG 32860


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: uncultured Bacilli bacterium


organism_name: Staphylococcus pseudintermedius


annotation_name: Annotation submitted by Institut Pasteur

annotation_provider: Institut Pasteur

asm_submitter: Institut Pasteur

organism_name: Cohnella rhizoplanae

refseq_category: reference genome

relation_to_type_material: assembly from type material


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Enterovibrio norvegicus


organism_name: uncultured Roseburia sp.


organism_name: Paenibacillus sp. JJ-100


organism_name: Klebsiella pneumoniae


excluded_from_refseq: annotation fails completeness check; many frameshifted proteins


asm_submitter: institut national de recherche pour l'agriculture, l'alimentation et l'environnement ( inrae)

organism_name: Bacillus paralicheniformis


organism_name: Bacillus licheniformis


excluded_from_refseq: derived from metagenome; genus undefined


excluded_from_refseq: derived from metagenome

organism_name: uncultured Lachnoclostridium sp.


organism_name: Helicobacter typhlonius


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: Vibrio campbellii


organism_name: uncultured bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Muribaculaceae bacterium


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genus undefined


organism_name: uncultured Clostridiaceae bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Corynebacterium stationis


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Eggerthellaceae bacterium


organism_name: uncultured Anaerotruncus sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: uncultured Bacteroides sp.


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Rikenellaceae bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Dorea sp.


organism_name: uncultured Caryophanales bacterium


organism_name: uncultured Porphyromonadaceae bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined


organism_name: uncultured Butyricicoccus sp.


organism_name: uncultured bacterium


organism_name: uncultured Prevotella sp.


organism_name: Turicimonas muris


organism_name: uncultured Lachnoclostridium sp.


organism_name: uncultured Peptococcaceae bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Eubacteriaceae bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Clostridiaceae bacterium


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Bacteroides caecimuris


organism_name: uncultured Acholeplasmataceae bacterium


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Muribaculaceae bacterium


excluded_from_refseq: contaminated; derived from metagenome

organism_name: uncultured Enterorhabdus sp.


organism_name: uncultured Dorea sp.


organism_name: uncultured Clostridia bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly


organism_name: uncultured Butyricicoccus sp.


organism_name: uncultured bacterium


organism_name: uncultured Angelakisella sp.


organism_name: Acutalibacter muris


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Turicibacter sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Muribaculum intestinale


organism_name: Thomasclavelia cocleata


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Roseburia sp.


organism_name: uncultured Hungatella sp.


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: uncultured Eggerthellaceae bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Parabacteroides sp.


organism_name: Citrobacter amalonaticus


organism_name: uncultured bacterium


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Hungatella sp.


organism_name: uncultured Blautia sp.


organism_name: Escherichia coli


organism_name: uncultured Acetatifactor sp.


organism_name: uncultured Coriobacteriia bacterium


organism_name: uncultured Atopobiaceae bacterium


organism_name: uncultured Coriobacteriales bacterium


organism_name: uncultured Roseburia sp.


organism_name: uncultured Coriobacteriaceae bacterium


organism_name: uncultured Faecalitalea sp.


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Butyricicoccus sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Emergencia timonensis


organism_name: uncultured Eubacteriaceae bacterium


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Alistipes sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured bacterium


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Clostridium sp.


organism_name: Bifidobacterium pseudolongum


organism_name: uncultured Lachnoclostridium sp.


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Solobacterium sp.


organism_name: uncultured Bacteroides sp.


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: uncultured Enterorhabdus sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Roseburia sp.


organism_name: Ligilactobacillus murinus


organism_name: uncultured Clostridiaceae bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Dorea sp.


organism_name: uncultured Caryophanales bacterium


organism_name: uncultured Eubacterium sp.


organism_name: Angelakisella massiliensis


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured bacterium


organism_name: Acutalibacter muris


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: Lactobacillus intestinalis


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Ruminococcus sp.


organism_name: Turicimonas muris


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Dialister sp.


organism_name: uncultured Coriobacteriaceae bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; genome length too small

organism_name: Paraprevotella clara


organism_name: uncultured Hungatella sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Eubacterium sp.


organism_name: Bilophila wadsworthia


organism_name: Acetatifactor muris


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Butyricicoccus sp.


organism_name: uncultured Peptococcaceae bacterium


organism_name: uncultured Bacilli bacterium


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Clostridiaceae bacterium


organism_name: uncultured Prevotella sp.


organism_name: uncultured Clostridia bacterium


organism_name: Eubacterium plexicaudatum


organism_name: uncultured bacterium


organism_name: uncultured Dorea sp.


organism_name: uncultured Sutterella sp.


organism_name: uncultured Eubacteriaceae bacterium


organism_name: uncultured Collinsella sp.


organism_name: uncultured Roseburia sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Oscillibacter sp.


organism_name: Lachnospira eligens


organism_name: uncultured Oscillospiraceae bacterium


excluded_from_refseq: RefSeq annotation failed; derived from metagenome

organism_name: uncultured Ruminococcus sp.


organism_name: Faecalibacterium prausnitzii


organism_name: uncultured Hungatella sp.


organism_name: uncultured Subdoligranulum sp.


organism_name: uncultured Coriobacteriaceae bacterium


organism_name: uncultured Prevotella sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Culturomica sp.


organism_name: Ruminococcus bromii


organism_name: uncultured Clostridia bacterium


organism_name: Segatella copri


organism_name: uncultured Agathobacter sp.


organism_name: uncultured Lachnoclostridium sp.


organism_name: uncultured Dorea sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Eubacteriaceae bacterium


organism_name: Romboutsia ilealis


organism_name: uncultured Lachnospira sp.


organism_name: uncultured Hungatella sp.


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Angelakisella sp.


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Caryophanales bacterium


organism_name: uncultured Butyricicoccus sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Alistipes sp.


organism_name: uncultured Clostridiaceae bacterium


organism_name: uncultured Roseburia sp.


excluded_from_refseq: contaminated; unverified source organism; annotation fails MAG completeness check; derived from metagenome


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Butyrivibrio sp.


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Atopobiaceae bacterium


organism_name: uncultured Blautia sp.


organism_name: Segatella copri


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured bacterium


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Subdoligranulum sp.


organism_name: uncultured Anaerotruncus sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Oribacterium sp.


organism_name: uncultured Clostridiaceae bacterium


organism_name: uncultured Clostridia bacterium


organism_name: Ruthenibacterium lactatiformans


organism_name: uncultured Neglectibacter sp.


organism_name: uncultured Lachnoclostridium sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Methanosphaera sp.


organism_name: Faecalibaculum rodentium


organism_name: Adlercreutzia equolifaciens


organism_name: uncultured Clostridium sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Parabacteroides sp.


organism_name: uncultured bacterium


organism_name: Hungatella hathewayi


organism_name: Parabacteroides distasonis


organism_name: Intestinimonas butyriciproducens


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Bacteroides sp.


organism_name: Eubacterium plexicaudatum


organism_name: uncultured Coriobacteriaceae bacterium


organism_name: uncultured Dorea sp.


organism_name: uncultured Lachnoclostridium sp.


organism_name: Akkermansia muciniphila


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Alistipes sp.


organism_name: uncultured Butyricicoccus sp.


organism_name: uncultured Roseburia sp.


organism_name: Alistipes indistinctus


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Enterorhabdus sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Peptococcaceae bacterium


organism_name: Parabacteroides goldsteinii


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Blautia sp.


organism_name: uncultured Atopobiaceae bacterium


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Oscillospiraceae bacterium


excluded_from_refseq: unverified source organism; derived from metagenome; genome length too small

organism_name: Emergencia timonensis


organism_name: uncultured Eggerthella sp.


organism_name: uncultured Alistipes sp.


organism_name: Lactobacillus johnsonii


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Prevotella sp.


organism_name: uncultured Flavonifractor sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Roseburia sp.


organism_name: uncultured bacterium


organism_name: uncultured Mycoplasmatota bacterium


organism_name: Parabacteroides johnsonii


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genome length too small

organism_name: Lactobacillus taiwanensis


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Eubacteriaceae bacterium


organism_name: uncultured Lachnospiraceae bacterium


annotation_name: Annotation submitted by universite de limoges

annotation_provider: universite de limoges

asm_submitter: universite de limoges

excluded_from_refseq: genome length too large

organism_name: Klebsiella pneumoniae


organism_name: Acinetobacter baumannii


organism_name: uncultured Butyricicoccus sp.


organism_name: uncultured Acetatifactor sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: Parabacteroides merdae


organism_name: Staphylococcus aureus


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Hungatella sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Bacillota bacterium


organism_name: Turicimonas muris


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured bacterium


organism_name: uncultured Christensenella sp.


organism_name: uncultured Dorea sp.


organism_name: Eubacterium plexicaudatum


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Coriobacteriia bacterium


organism_name: uncultured Peptococcaceae bacterium


organism_name: Parvibacter caecicola


organism_name: uncultured Prevotella sp.


organism_name: uncultured Phascolarctobacterium sp.


organism_name: Bacteroides caccae


organism_name: Parasutterella excrementihominis


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Lachnoclostridium sp.


organism_name: Proteus hauseri


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Roseburia sp.


organism_name: uncultured Dorea sp.


organism_name: uncultured Clostridiaceae bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Angelakisella sp.


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured bacterium


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Alistipes sp.


organism_name: uncultured Mitsuokella sp.


organism_name: uncultured Actinomyces sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: uncultured Enterorhabdus sp.


organism_name: uncultured Hungatella sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Clostridia bacterium


excluded_from_refseq: derived from metagenome

organism_name: uncultured Roseburia sp.


organism_name: uncultured Dorea sp.


organism_name: Anaerostipes hadrus


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Subdoligranulum sp.


organism_name: uncultured Muribaculaceae bacterium


excluded_from_refseq: unverified source organism; derived from metagenome; genus undefined


organism_name: uncultured Lactobacillus sp.


organism_name: uncultured Clostridiaceae bacterium


organism_name: uncultured Anaerotruncus sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Azospirillum sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Turicibacter sp.


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Clostridia bacterium


excluded_from_refseq: contaminated; unverified source organism; derived from metagenome

organism_name: uncultured Enterorhabdus sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: uncultured Bacteroides sp.


annotation_name: Annotation submitted by Max Planck Institute for Marine Microbiology

organism_name: uncultured Sulfurimonas sp.


organism_name: uncultured Acetatifactor sp.


organism_name: uncultured Hungatella sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Collinsella sp.


organism_name: uncultured bacterium


organism_name: uncultured Butyrivibrio sp.


organism_name: uncultured Roseburia sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Allobaculum sp.


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Clostridiaceae bacterium


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Alistipes sp.


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Oxalobacter sp.


organism_name: Enorma burkinafasonensis


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Lachnoclostridium sp.


organism_name: uncultured Enterorhabdus sp.


organism_name: uncultured bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Bacteroides caecimuris


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Phascolarctobacterium sp.


organism_name: uncultured Roseburia sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: Flavonifractor plautii


organism_name: uncultured Pseudoflavonifractor sp.


organism_name: uncultured Mollicutes bacterium


organism_name: uncultured Ruminococcus sp.


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Blautia wexlerae


organism_name: uncultured Angelakisella sp.


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Lachnoclostridium sp.


organism_name: Phocaeicola dorei


organism_name: uncultured Faecalicatena sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Dorea sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: Citrobacter amalonaticus


organism_name: Bacteroides faecis


organism_name: uncultured Clostridiaceae bacterium


organism_name: uncultured Christensenella sp.


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome

organism_name: uncultured Turicibacter sp.


organism_name: uncultured bacterium


organism_name: uncultured Clostridia bacterium


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Romboutsia timonensis


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Eubacteriaceae bacterium


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Lentisphaeria bacterium


annotation_provider: Max Planck Institute for Marine Microbiology

organism_name: uncultured Sulfurimonas sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Dorea sp.


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Lachnoclostridium sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Cloacibacillus sp.


organism_name: uncultured Prevotella sp.


excluded_from_refseq: contaminated; derived from metagenome

organism_name: uncultured Subdoligranulum sp.


organism_name: Dorea formicigenerans


organism_name: uncultured Roseburia sp.


organism_name: uncultured bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Alistipes sp.


organism_name: uncultured Clostridiaceae bacterium


organism_name: Roseburia intestinalis


excluded_from_refseq: RefSeq annotation failed; derived from metagenome

organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Enterorhabdus sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Christensenella sp.


organism_name: Bacteroides acidifaciens


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: uncultured Dorea sp.


organism_name: Escherichia coli


organism_name: Bilophila wadsworthia


organism_name: uncultured Acetatifactor sp.


organism_name: Adlercreutzia caecimuris


organism_name: uncultured Subdoligranulum sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Parabacteroides goldsteinii


organism_name: uncultured Sporosarcina sp.


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Lachnotalea sp.


organism_name: Klebsiella pneumoniae


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Peptococcaceae bacterium


organism_name: uncultured bacterium


organism_name: uncultured Enterorhabdus sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Clostridium sp.


organism_name: Alistipes finegoldii


organism_name: uncultured Oscillibacter sp.


organism_name: Escherichia coli


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Faecalibacterium sp.


organism_name: uncultured Lachnoclostridium sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Coriobacteriia bacterium


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Lachnospiraceae bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; genome length too small

organism_name: Alistipes shahii


organism_name: uncultured Lachnotalea sp.


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Eubacteriales bacterium


organism_name: Klebsiella pneumoniae


organism_name: uncultured Megasphaera sp.


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: uncultured Roseburia sp.


organism_name: Bifidobacterium adolescentis


organism_name: uncultured Prevotella sp.


organism_name: Escherichia coli


organism_name: Dorea longicatena


organism_name: uncultured Neglectibacter sp.


organism_name: uncultured bacterium


organism_name: Bittarella massiliensis (ex Durand et al. 2017)


organism_name: uncultured Peptococcaceae bacterium


organism_name: Bacteroides thetaiotaomicron


organism_name: Parabacteroides distasonis


organism_name: uncultured Clostridium sp.


organism_name: uncultured Caryophanales bacterium


organism_name: Akkermansia muciniphila


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Lachnoclostridium sp.


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: uncultured Acetobacter sp.


organism_name: uncultured Dorea sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Clostridiaceae bacterium


organism_name: Adlercreutzia equolifaciens


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Roseburia sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Atopobiaceae bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Clostridia bacterium


organism_name: Bacteroides uniformis


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Angelakisella sp.


organism_name: uncultured Slackia sp.


organism_name: uncultured Butyrivibrio sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Alistipes ihumii


organism_name: Methanobrevibacter smithii


organism_name: uncultured Prevotella sp.


organism_name: Alistipes communis


organism_name: uncultured Dorea sp.


excluded_from_refseq: contaminated; unverified source organism; derived from metagenome; genome length too large

organism_name: Bacteroides caecimuris


organism_name: uncultured Prevotellaceae bacterium


organism_name: uncultured bacterium


organism_name: uncultured Christensenella sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Caryophanales bacterium


organism_name: uncultured Anaerotruncus sp.


organism_name: Catenibacterium mitsuokai


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Angelakisella sp.


asm_submitter: IHU - Mediterranee Infection

organism_name: Streptococcus bouchesdurhonensis


organism_name: Alistipes onderdonkii


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; genome length too small

organism_name: Roseburia hominis


asm_submitter: Center for Biotechnology, Bielefeld University

infraspecific_name: strain=DSM 114396

organism_name: Kitasatospora fiedleri


organism_name: Allocoprococcus comes


organism_name: uncultured Prevotella sp.


organism_name: uncultured bacterium


organism_name: Parabacteroides distasonis


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Hungatella sp.


organism_name: uncultured Eggerthella sp.


organism_name: uncultured Mycoplasmatota bacterium


organism_name: uncultured Sutterella sp.


organism_name: uncultured Oscillibacter sp.


organism_name: Mucispirillum schaedleri


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Anaerovibrio sp.


organism_name: uncultured Clostridium sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Coriobacteriales bacterium


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Acidaminococcus sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Eggerthellaceae bacterium


organism_name: uncultured Lachnoclostridium sp.


organism_name: uncultured Angelakisella sp.


organism_name: uncultured Ruthenibacterium sp.


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Clostridia bacterium


organism_name: Leyella stercorea


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: uncultured Mycoplasma sp.


organism_name: uncultured Emergencia sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Hungatella sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Prevotellaceae bacterium


organism_name: uncultured Megasphaera sp.


organism_name: uncultured Muribaculaceae bacterium


organism_name: Bacteroides caccae


organism_name: uncultured bacterium


organism_name: uncultured Clostridium sp.


excluded_from_refseq: genome length too large

organism_name: Escherichia coli


organism_name: Thomasclavelia cocleata


asm_submitter: UNIVERSITY OF CAMBRIDGE


organism_name: uncultured Odoribacter sp.


organism_name: Bacteroides thetaiotaomicron


excluded_from_refseq: derived from metagenome; genus undefined


excluded_from_refseq: derived from metagenome

organism_name: uncultured Eubacterium sp.


organism_name: uncultured Prevotella sp.


organism_name: Muribaculum intestinale


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Adlercreutzia caecimuris


organism_name: Helicobacter rodentium


organism_name: uncultured Alistipes sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genus undefined


organism_name: uncultured Oscillibacter sp.


organism_name: Akkermansia muciniphila


organism_name: uncultured Rikenellaceae bacterium


organism_name: Bacteroides caecimuris


organism_name: Mucispirillum schaedleri


organism_name: uncultured Peptococcaceae bacterium


organism_name: uncultured Bacilli bacterium


organism_name: Faecalibaculum rodentium


organism_name: uncultured Treponema sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Mailhella sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Muribaculum sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Alistipes sp.


organism_name: uncultured Parasutterella sp.


organism_name: uncultured Dubosiella sp.


organism_name: uncultured Eubacterium sp.


organism_name: Lactobacillus amylovorus


organism_name: uncultured Helicobacter sp.


organism_name: uncultured Duncaniella sp.


organism_name: uncultured Kineothrix sp.


organism_name: Faecalibaculum rodentium


organism_name: Lactobacillus johnsonii


excluded_from_refseq: contaminated; derived from metagenome; genus undefined


organism_name: Bacteroides caecimuris


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genome length too small

organism_name: Parabacteroides distasonis


organism_name: Christensenellaceae bacterium


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Akkermansia muciniphila


organism_name: uncultured Muribaculum sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Acetatifactor sp.


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: uncultured bacterium


organism_name: Duncaniella muris


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: uncultured Parabacteroides sp.


organism_name: uncultured Mailhella sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: uncultured Turicibacter sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Clostridium sp.


organism_name: Lactobacillus intestinalis


organism_name: Christensenellaceae bacterium


organism_name: uncultured Muribaculaceae bacterium


organism_name: Lactobacillus johnsonii


organism_name: uncultured Lachnospiraceae bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: uncultured Bacteroidales bacterium


excluded_from_refseq: unverified source organism; derived from metagenome; genome length too small

organism_name: [Ruminococcus] lactaris


organism_name: Bifidobacterium pseudolongum subsp. globosum


organism_name: uncultured Prevotellamassilia sp.


organism_name: uncultured Alistipes sp.


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Muribaculum intestinale


organism_name: uncultured Kineothrix sp.


organism_name: uncultured Tidjanibacter sp.


organism_name: uncultured Oscillospiraceae bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Mucispirillum schaedleri


organism_name: Turicimonas muris


organism_name: Akkermansia muciniphila


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured bacterium


organism_name: uncultured Muribaculum sp.


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Duncaniella sp.


organism_name: uncultured Parasutterella sp.


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: uncultured Mailhella sp.


organism_name: uncultured Eubacterium sp.


excluded_from_refseq: RefSeq annotation failed; derived from metagenome

organism_name: uncultured Acetatifactor sp.


organism_name: Parasutterella excrementihominis


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: uncultured Alistipes sp.


organism_name: uncultured Lachnospiraceae bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: uncultured Turicibacter sp.


organism_name: uncultured Prevotella sp.


organism_name: Bacteroides acidifaciens


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; genome length too small

organism_name: Paramuribaculum intestinale


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Dorea sp.


organism_name: Duncaniella muris


organism_name: uncultured Anaeroplasmataceae bacterium


organism_name: Akkermansia muciniphila


organism_name: Enterocloster clostridioformis


organism_name: Helicobacter apodemus


organism_name: uncultured Kineothrix sp.


organism_name: Ligilactobacillus murinus


organism_name: uncultured Acetatifactor sp.


organism_name: uncultured Ureaplasma sp.


organism_name: uncultured Escherichia sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Alistipes finegoldii


excluded_from_refseq: unverified source organism; derived from metagenome; fragmented assembly; genome length too small

organism_name: Butyricimonas paravirosa


organism_name: uncultured Duncaniella sp.


organism_name: uncultured Bacteroides sp.


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Odoribacter sp.


organism_name: Parasutterella excrementihominis


organism_name: uncultured Prevotella sp.


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Bilophila sp.


organism_name: uncultured Atopobiaceae bacterium


organism_name: Christensenellaceae bacterium


organism_name: uncultured Muribaculaceae bacterium


organism_name: Lactobacillus johnsonii


organism_name: uncultured bacterium


organism_name: Turicimonas muris


organism_name: uncultured Alistipes sp.


organism_name: Paramuribaculum intestinale


organism_name: Phocaeicola vulgatus


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Parasutterella sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Muribaculum sp.


organism_name: Mucispirillum schaedleri


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: uncultured Acetatifactor sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Duncaniella sp.


organism_name: uncultured Dorea sp.


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Hungatella sp.


organism_name: uncultured Anaerotignum sp.


organism_name: uncultured Dubosiella sp.


organism_name: uncultured Kineothrix sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Alistipes sp.


organism_name: Muribaculum intestinale


organism_name: Faecalibaculum rodentium


organism_name: uncultured Desulfovibrio sp.


organism_name: Duncaniella muris


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Parabacteroides sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Duncaniella sp.


organism_name: uncultured Angelakisella sp.


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Paraprevotella sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Atopobiaceae bacterium


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Mucispirillum sp.


organism_name: uncultured Muribaculum sp.


organism_name: Christensenellaceae bacterium


organism_name: uncultured bacterium


organism_name: uncultured Acetatifactor sp.


organism_name: uncultured Odoribacter sp.


organism_name: uncultured Mailhella sp.


organism_name: Mucispirillum schaedleri


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Alistipes sp.


organism_name: uncultured Muribaculaceae bacterium


organism_name: Parabacteroides distasonis


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Bacilli bacterium


organism_name: uncultured Prevotella sp.


organism_name: Lactococcus lactis


organism_name: Duncaniella muris


organism_name: uncultured Parabacteroides sp.


organism_name: uncultured Kineothrix sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured bacterium


organism_name: uncultured Duncaniella sp.


organism_name: uncultured Metamycoplasma sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: Paramuribaculum intestinale


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Atopobiaceae bacterium


organism_name: Muribaculum intestinale


organism_name: uncultured Muribaculaceae bacterium


organism_name: Limosilactobacillus reuteri


organism_name: Bifidobacterium pseudolongum subsp. globosum


organism_name: uncultured Acetatifactor sp.


organism_name: uncultured Alistipes sp.


organism_name: Christensenellaceae bacterium


organism_name: Acutalibacter muris


organism_name: uncultured Dubosiella sp.


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: uncultured Staphylococcus sp.


organism_name: uncultured Eubacteriales bacterium


excluded_from_refseq: contaminated; derived from metagenome

organism_name: uncultured Anaerotruncus sp.


organism_name: Helicobacter hepaticus


organism_name: uncultured Hungatella sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: uncultured Lachnospiraceae bacterium


organism_name: Lactobacillus intestinalis


organism_name: Turicimonas muris


excluded_from_refseq: derived from metagenome

organism_name: Mucispirillum schaedleri


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Muribaculum sp.


organism_name: uncultured Odoribacter sp.


organism_name: uncultured Adlercreutzia sp.


organism_name: uncultured Duncaniella sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Ruminiclostridium sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genus undefined


organism_name: Akkermansia muciniphila


organism_name: Phocaeicola vulgatus


organism_name: uncultured Allobaculum sp.


organism_name: Muribaculum intestinale


organism_name: uncultured bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Christensenellaceae bacterium


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Dorea sp.


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Kineothrix sp.


organism_name: uncultured Alistipes sp.


organism_name: uncultured Muribaculum sp.


organism_name: uncultured Mailhella sp.


organism_name: uncultured Duncaniella sp.


organism_name: uncultured Bacillota bacterium


organism_name: Mucispirillum schaedleri


organism_name: uncultured Ruminococcus sp.


organism_name: Turicimonas muris


excluded_from_refseq: contaminated; derived from metagenome; genus undefined

organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Prevotella sp.


organism_name: Duncaniella muris


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Limosilactobacillus reuteri


organism_name: uncultured Helicobacter sp.


organism_name: uncultured Eubacterium sp.


organism_name: Bifidobacterium pseudolongum subsp. globosum


organism_name: Ligilactobacillus murinus


organism_name: Helicobacter typhlonius


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured bacterium


organism_name: uncultured Alistipes sp.


organism_name: uncultured Muribaculum sp.


organism_name: Mucispirillum schaedleri


organism_name: Bacteroides acidifaciens


organism_name: Parabacteroides distasonis


organism_name: uncultured Odoribacter sp.


organism_name: Acutalibacter muris


organism_name: Christensenellaceae bacterium


organism_name: uncultured Bacilli bacterium


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Mucispirillum sp.


organism_name: uncultured Duncaniella sp.


organism_name: Helicobacter typhlonius


organism_name: uncultured Butyrivibrio sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Alistipes sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Dorea sp.


organism_name: uncultured Muribaculum sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genome length too small

organism_name: Parasutterella excrementihominis


organism_name: uncultured Acetatifactor sp.


organism_name: uncultured Mailhella sp.


organism_name: Christensenellaceae bacterium


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Lachnospira sp.


organism_name: uncultured Turicibacter sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Parabacteroides distasonis


organism_name: uncultured Bacillota bacterium


organism_name: Ligilactobacillus murinus


organism_name: uncultured Anaerotruncus sp.


organism_name: uncultured Ruthenibacterium sp.


organism_name: uncultured Duncaniella sp.


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Bacilli bacterium


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Faecalicatena sp.


organism_name: uncultured Alistipes sp.


organism_name: Faecalibaculum rodentium


organism_name: uncultured Eubacteriales bacterium


organism_name: Akkermansia muciniphila


organism_name: uncultured Acetatifactor sp.


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Kineothrix sp.


organism_name: uncultured Selenomonadaceae bacterium


organism_name: Limosilactobacillus reuteri


organism_name: uncultured Ruminiclostridium sp.


organism_name: uncultured bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Duncaniella muris


organism_name: uncultured Muribaculaceae bacterium


organism_name: Phocaeicola vulgatus


organism_name: uncultured Phocaeicola sp.


organism_name: Muribaculum intestinale


organism_name: Christensenellaceae bacterium


organism_name: uncultured Duncaniella sp.


organism_name: Lactococcus lactis


organism_name: uncultured Alistipes sp.


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Oscillibacter sp.


organism_name: Paramuribaculum intestinale


organism_name: uncultured Acetatifactor sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: Mucispirillum schaedleri


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Akkermansia muciniphila


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Paraprevotella sp.


organism_name: uncultured Helicobacter sp.


organism_name: Helicobacter ganmani


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Duncaniella sp.


organism_name: uncultured Atopobiaceae bacterium


organism_name: Christensenellaceae bacterium


organism_name: uncultured Hungatella sp.


organism_name: Alistipes finegoldii


organism_name: uncultured Lachnospira sp.


organism_name: uncultured Oscillibacter sp.


organism_name: uncultured Bacilli bacterium


organism_name: uncultured Dubosiella sp.


organism_name: uncultured Mailhella sp.


organism_name: uncultured bacterium


organism_name: uncultured Prevotellamassilia sp.


organism_name: Muribaculum intestinale


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Duncaniella muris


organism_name: uncultured Acetatifactor sp.


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Alistipes sp.


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Muribaculum sp.


organism_name: uncultured Oscillospiraceae bacterium


organism_name: Parabacteroides distasonis


organism_name: Ligilactobacillus murinus


organism_name: uncultured Duncaniella sp.


organism_name: Akkermansia muciniphila


organism_name: uncultured Eubacteriales bacterium


organism_name: Faecalibaculum rodentium


organism_name: uncultured Prevotella sp.


excluded_from_refseq: contaminated; derived from metagenome; genome length too small


organism_name: Acutalibacter muris


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: uncultured Faecalibaculum sp.


organism_name: Mucispirillum schaedleri


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Ruthenibacterium sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: uncultured Muribaculaceae bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Bacteroides acidifaciens


organism_name: uncultured Bacillota bacterium


organism_name: uncultured Dorea sp.


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Muribaculum intestinale


organism_name: uncultured Alistipes sp.


organism_name: uncultured Harryflintia sp.


organism_name: Limosilactobacillus reuteri


organism_name: uncultured Duncaniella sp.


organism_name: Paramuribaculum intestinale


organism_name: uncultured Bilophila sp.


organism_name: Ligilactobacillus murinus


organism_name: Christensenellaceae bacterium


organism_name: uncultured Eubacteriales bacterium


organism_name: Bacteroides intestinalis


organism_name: Duncaniella muris


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Paraprevotella sp.


organism_name: uncultured Treponema sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Desulfovibrio sp.


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Alistipes sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Kineothrix sp.


organism_name: uncultured Dorea sp.


organism_name: Muribaculum intestinale


organism_name: uncultured bacterium


organism_name: uncultured Acetatifactor sp.


organism_name: Akkermansia muciniphila


organism_name: uncultured Hungatella sp.


organism_name: Lactobacillus johnsonii


organism_name: Acutalibacter muris


organism_name: Lactococcus lactis


organism_name: Duncaniella muris


organism_name: Paramuribaculum intestinale


organism_name: Ligilactobacillus murinus


organism_name: uncultured Ruthenibacterium sp.


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Bacilli bacterium


organism_name: uncultured Duncaniella sp.


organism_name: uncultured Mailhella sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Phocaeicola vulgatus


organism_name: uncultured bacterium


organism_name: uncultured Prevotella sp.


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Acetatifactor sp.


organism_name: uncultured Clostridia bacterium


organism_name: uncultured Clostridium sp.


organism_name: uncultured Muribaculum sp.


organism_name: uncultured Alistipes sp.


organism_name: Dubosiella newyorkensis


organism_name: Christensenellaceae bacterium


organism_name: uncultured Eubacterium sp.


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Bacilli bacterium


organism_name: uncultured Angelakisella sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Ligilactobacillus murinus


organism_name: uncultured Odoribacter sp.


organism_name: Alistipes finegoldii


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Oscillospiraceae bacterium


organism_name: uncultured Duncaniella sp.


organism_name: uncultured Ruminococcus sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Bacteroides thetaiotaomicron


organism_name: uncultured Prevotella sp.


organism_name: Bacteroides acidifaciens


organism_name: uncultured Treponema sp.


organism_name: uncultured Alistipes sp.


organism_name: Christensenellaceae bacterium


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Eubacterium sp.


organism_name: Parabacteroides goldsteinii


organism_name: uncultured Eubacteriales bacterium


organism_name: Helicobacter typhlonius


organism_name: uncultured Muribaculum sp.


organism_name: uncultured Clostridia bacterium


organism_name: Parabacteroides distasonis


organism_name: Ligilactobacillus murinus


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Dorea sp.


organism_name: uncultured bacterium


organism_name: uncultured Rickettsiales bacterium


organism_name: uncultured Atopobiaceae bacterium


organism_name: uncultured Mucispirillum sp.


organism_name: uncultured Alistipes sp.


organism_name: Christensenellaceae bacterium


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Bacteroides caecimuris