organism_name: Nitrospinaceae bacterium


asm_submitter: WELLCOME SANGER INSTITUTE

assembly_level: Contig

assembly_type: haploid

excluded_from_refseq: derived from metagenome; genus undefined

genome_rep: Full

group: bacteria

organism_name: Hyphomicrobiaceae bacterium

release_type: Major

version_status: latest


assembly_level: Complete Genome

organism_name: Planctomycetota bacterium


assembly_level: Chromosome

organism_name: Nitrospirales bacterium


excluded_from_refseq: derived from metagenome

organism_name: Candidatus Leptofilum sp.

paired_asm_comp: identical


organism_name: Pirellulaceae bacterium


organism_name: Candidatus Multivoradales bacterium


organism_name: Thermodesulfobacteriota bacterium


organism_name: Nitrospinales bacterium


organism_name: Candidatus Rariloculaceae bacterium


organism_name: Candidatus Multivoraceae bacterium


organism_name: Promineifilaceae bacterium (SeqCode)


organism_name: Saprospiraceae bacterium


organism_name: Myxococcota bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

group: archaea

organism_name: Candidatus Nitrosopumilus sp.


organism_name: Oceaniradius stylonematis

refseq_category: reference genome


organism_name: Terriglobia bacterium


organism_name: Candidatus Poriferihabitaceae bacterium


organism_name: Halioglobus sp.


organism_name: Rhodothermales bacterium


organism_name: Nitrospirales bacterium


organism_name: Planctomycetota bacterium


organism_name: Phototrophicaceae bacterium


organism_name: Candidatus Leptofilum sp.


organism_name: Nitrospira sp.


organism_name: Kofleriaceae bacterium


organism_name: Trueperaceae bacterium


organism_name: Neptuniibacter marinus


organism_name: Candidatus Poribacteria bacterium


organism_name: Phycisphaeraceae bacterium


organism_name: Nitrospinaceae bacterium


organism_name: Gaiellaceae bacterium


organism_name: Myxococcota bacterium


organism_name: Thalassobaculum sp.


organism_name: Nitrospinota bacterium


organism_name: Candidatus Oxydemutatoraceae bacterium


organism_name: Candidatus Poriferihabitaceae bacterium


organism_name: Candidatus Multivoradales bacterium


organism_name: Nitrospirales bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Phototrophicaceae bacterium


organism_name: Nitrospinales bacterium


organism_name: Nitrosarchaeum sp.


organism_name: Sedimenticolaceae bacterium


organism_name: Planctomycetota bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Candidatus Latescibacterota bacterium


organism_name: Cyclobacteriaceae bacterium


organism_name: Longimicrobiales bacterium


organism_name: Pseudomonadales bacterium


organism_name: Candidatus Poribacteria bacterium


organism_name: Pontixanthobacter sp.


organism_name: Hyphomicrobiales bacterium


organism_name: Candidatus Multivorans sp.


organism_name: Nitrosopumilaceae archaeon


organism_name: Hyphomicrobiaceae bacterium


organism_name: Myxococcota bacterium


organism_name: Candidatus Multivoradales bacterium


organism_name: Opitutales bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Rhodothermales bacterium


organism_name: Terriglobia bacterium


organism_name: Methyloligellaceae bacterium


organism_name: Kordia sp.


organism_name: Rhodobiaceae bacterium


organism_name: Candidatus Nitrosopumilus sp.


organism_name: Phycisphaeraceae bacterium


organism_name: Bryobacterales bacterium


organism_name: Dehalococcoidia bacterium


excluded_from_refseq: derived from metagenome; genome length too large; genus undefined

organism_name: Candidatus Eiseniibacteriota bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Cyclobacteriaceae bacterium


organism_name: Chloroflexota bacterium


organism_name: Candidatus Spongiisociaceae bacterium


organism_name: Cenarchaeum sp.


organism_name: Bacteriovoracaceae bacterium


organism_name: uncultured Binatia bacterium (SeqCode)


organism_name: bacterium


organism_name: Acidimicrobiales bacterium


organism_name: Rhodococcus qingshengii


organism_name: Candidatus Thiodiazotropha sp.


organism_name: Flavobacteriaceae bacterium


organism_name: Endozoicomonadaceae bacterium


organism_name: Arcobacteraceae bacterium


organism_name: Cytophagales bacterium


organism_name: Woeseiaceae bacterium


organism_name: Sedimenticolaceae bacterium


organism_name: Granulosicoccus sp.


organism_name: Verrucomicrobiales bacterium


organism_name: Flavobacteriales bacterium


organism_name: Methylococcales bacterium


organism_name: Vibrionaceae bacterium


organism_name: Thiotrichaceae bacterium


organism_name: Planctomycetota bacterium


organism_name: Bythopirellula sp.


organism_name: Pseudomonadales bacterium


organism_name: Granulosicoccaceae bacterium


organism_name: Candidatus Thiodiazotropha sp.


organism_name: Spirochaetaceae bacterium


organism_name: Spirochaetota bacterium


organism_name: Robiginitomaculum sp.


organism_name: Hellea sp.


organism_name: Mariniblastus sp.


organism_name: Melioribacteraceae bacterium


organism_name: Paracoccaceae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Candidatus Vondammii sp.


organism_name: Wocania sp.


organism_name: Trueperaceae bacterium


asm_submitter: Institue for Microbiology, University of Veterinary Medicine Hannover

assembly_level: Scaffold

organism_name: Streptococcus suis


excluded_from_refseq: genome length too large


excluded_from_refseq: contaminated


excluded_from_refseq: annotation fails completeness check


asm_submitter: Centre for Microbiome Research

organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: Rivularia sp. (in: cyanobacteria)


organism_name: Kaistiaceae bacterium


organism_name: Maricaulaceae bacterium


organism_name: Flammeovirgaceae bacterium


organism_name: uncultured Granulicella sp.


organism_name: Denitrobaculum sp.


organism_name: Pseudomonadales bacterium


organism_name: Polyangiaceae bacterium


organism_name: Bryobacteraceae bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Longimicrobiales bacterium


organism_name: Mucilaginibacter sp.


organism_name: Spirochaetia bacterium


organism_name: Haliscomenobacter sp.


organism_name: Marinomonas sp.


organism_name: Candidatus Endobugula sp.


organism_name: bacterium


organism_name: Rhodospirillales bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Candidatus Aminicenantia bacterium


organism_name: Candidatus Latescibacterota bacterium


organism_name: Acidobacteriota bacterium


organism_name: Rhodococcus qingshengii


organism_name: Candidatus Moanibacter sp.


organism_name: Bdellovibrionales bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Mycoplasmatales bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Bryobacterales bacterium


organism_name: Oligoflexales bacterium


organism_name: Opitutales bacterium


organism_name: Candidatus Oxydemutatoraceae bacterium


organism_name: uncultured Binatia bacterium (SeqCode)


organism_name: Ichthyobacteriaceae bacterium


organism_name: Terriglobia bacterium


organism_name: Sedimenticolaceae bacterium


organism_name: Longimicrobiales bacterium


organism_name: Bacterioplanoides sp.


organism_name: Pararhizobium sp.


organism_name: Candidatus Bandiella numerosa


organism_name: Parvibaculaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Spirochaetaceae bacterium


organism_name: Spiroplasma sp.


organism_name: Dehalococcoidia bacterium


organism_name: Candidatus Poriferihabitaceae bacterium


organism_name: Salinispira sp.


organism_name: Oscillospiraceae bacterium


organism_name: Thermodesulfobacteriota bacterium


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Acinetobacter sp.


organism_name: Candidatus Marinacidobacterium sp.


organism_name: Desulfobacteraceae bacterium


organism_name: Candidatus Poriferisodalis sp.


organism_name: Granulicella sp.


organism_name: Rivularia sp. (in: cyanobacteria)


organism_name: Chloroflexota bacterium


organism_name: Methylacidiphilales bacterium


organism_name: Bryobacteraceae bacterium


organism_name: Candidatus Latescibacterota bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Phototrophicaceae bacterium


organism_name: Myxococcota bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Opitutales bacterium


organism_name: Paracoccaceae bacterium


organism_name: Longimicrobiales bacterium


organism_name: Agrobacterium tumefaciens


organism_name: Gemmataceae bacterium


organism_name: Klebsiella pneumoniae


organism_name: Chitinophagaceae bacterium


organism_name: Pedobacter sp.


organism_name: Algihabitans sp.


organism_name: Filomicrobium sp.


organism_name: Roseococcus sp.


organism_name: Burkholderiaceae bacterium


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Venatoribacter sp.


organism_name: Actinomycetes bacterium


organism_name: Phaeodactylibacter xiamenensis


organism_name: Alphaproteobacteria bacterium


organism_name: Rhodospirillaceae bacterium


organism_name: Aliiglaciecola sp.


organism_name: Edaphocola sp.


organism_name: Roseovarius mucosus


organism_name: Marinobacter salarius


organism_name: Antarctobacter sp.


organism_name: Calditrichia bacterium


organism_name: Cyclobacteriaceae bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Algiphilus sp.


organism_name: Roseovarius sp.


organism_name: Phycisphaerales bacterium


organism_name: Pedobacter sp.


organism_name: Gracilimonas sp.


organism_name: Botrimarina mediterranea


organism_name: Rhodospirillales bacterium


organism_name: Vicingaceae bacterium


organism_name: Pirellulales bacterium


organism_name: Ilumatobacter fluminis


organism_name: Leptonemataceae bacterium


organism_name: Limisphaerales bacterium


organism_name: Cytophagales bacterium


organism_name: uncultured Pseudohongiella sp.


organism_name: Sphingomonadales bacterium


organism_name: Ekhidna sp.


organism_name: Hwanghaeella sp.


organism_name: Aeoliella sp.


organism_name: Sphingomonas sp.


organism_name: Flagellimonas sp.


organism_name: Polyangiales bacterium


organism_name: Sphingopyxis sp.


organism_name: Variovorax sp.


organism_name: Halioglobus sp.


organism_name: Saprospiraceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Kaistia hirudinis


organism_name: Oricola indica


organism_name: Chryseolinea sp.


organism_name: Pelagibius sp.


organism_name: Fulvivirga sp.


organism_name: Micropepsaceae bacterium


organism_name: Hyphomonadaceae bacterium


organism_name: Methylibium sp.


organism_name: Rhodospirillales bacterium


organism_name: Larkinella sp.


organism_name: Myxococcota bacterium


organism_name: Marinoscillum sp.


organism_name: Phycisphaerales bacterium


excluded_from_refseq: contaminated; derived from metagenome; genus undefined

organism_name: Candidatus Azotimanducaceae bacterium


organism_name: Neorhizobium sp.


organism_name: uncultured Pseudohongiella sp.


organism_name: Rhizobiaceae bacterium


organism_name: Rhodoglobus sp.


organism_name: Reyranella sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Hydrocarboniphaga effusa


organism_name: Aestuariivirga sp.


organism_name: Shimia sp.


organism_name: Opitutaceae bacterium


organism_name: Dyadobacter sp.


organism_name: Brevundimonas sp.


organism_name: Gracilimonas sp.


organism_name: Botrimarina mediterranea


organism_name: Parvibaculaceae bacterium


organism_name: Roseibium aggregatum


organism_name: Mycobacterium sp.


organism_name: Patescibacteria group bacterium


organism_name: Kaistia sp.


organism_name: Roseobacter litoralis


organism_name: Variovorax sp.


organism_name: Hyphomicrobiales bacterium


organism_name: Candidatus Azotimanducaceae bacterium


organism_name: Tranquillimonas rosea


organism_name: Methyloligellaceae bacterium


organism_name: Tenacibaculum ovolyticum


organism_name: Wenzhouxiangellaceae bacterium


organism_name: Cyclobacteriaceae bacterium


organism_name: Azorhizobium sp.


organism_name: Halioglobus sp.


organism_name: Rhodococcus qingshengii


organism_name: Flagellimonas onchidii


organism_name: Methanolacinia petrolearia


organism_name: Alphaproteobacteria bacterium


organism_name: Lacipirellulaceae bacterium


organism_name: Peptococcia bacterium


organism_name: Polaromonas sp.


organism_name: Sediminibacterium sp.


organism_name: Hydrogenovibrio thermophilus


organism_name: Sphingobium sp.


organism_name: Cloacimonadales bacterium (SeqCode)


organism_name: Marinobacter salarius


organism_name: Henriciella sp.


organism_name: Hyphobacterium sp.


organism_name: Victivallales bacterium


organism_name: Tagaea sp.


organism_name: Phenylobacterium sp.


organism_name: Methanocorpusculum sp.


organism_name: Rhodospirillaceae bacterium


organism_name: Halarcobacter mediterraneus


organism_name: Pacificispira sp.


excluded_from_refseq: RefSeq annotation failed; derived from metagenome

organism_name: uncultured Maricaulis sp.


organism_name: Reyranella sp.


organism_name: Marinobacter salsuginis


organism_name: Parvibaculum sp.


organism_name: Marinobacter adhaerens


organism_name: Phycisphaerales bacterium


organism_name: Thalassospira sp.


organism_name: Sneathiella sp.


organism_name: Flagellimonas sp.


organism_name: Leptospirales bacterium


organism_name: Rhizobiaceae bacterium


organism_name: Rhodospirillales bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Robiginitalea biformata


organism_name: Pseudomonadales bacterium


organism_name: Antarctobacter sp.


organism_name: Hyphococcus sp.


organism_name: Oceaniradius stylonematis


organism_name: Cyclobacteriaceae bacterium


organism_name: Hoeflea sp.


organism_name: Candidatus Endolissoclinum sp.


organism_name: Marinobacter adhaerens


organism_name: Vreelandella sp.


organism_name: Myxococcota bacterium


organism_name: Candidatus Altimarinota bacterium


organism_name: Flavipsychrobacter sp.


organism_name: Roseibium aggregatum


organism_name: Bremerella volcania


organism_name: Minwuia sp.


organism_name: Balneolaceae bacterium


organism_name: Qipengyuania sp.


organism_name: Rhodococcus qingshengii


organism_name: Rhodospirillaceae bacterium


organism_name: Caldilineaceae bacterium


organism_name: Phycisphaerales bacterium


organism_name: Methyloligellaceae bacterium


organism_name: Hyphomicrobiales bacterium


organism_name: Roseibium sp.


organism_name: Pseudomonadales bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Croceimicrobium sp.


organism_name: Stappia sp.


organism_name: uncultured Pseudohongiella sp.


organism_name: Planctomycetota bacterium


organism_name: Leptonemataceae bacterium


organism_name: Roseovarius sp.


organism_name: Robiginitalea biformata


organism_name: Hoeflea sp.


organism_name: Ekhidna sp.


organism_name: Aliiroseovarius sp.


organism_name: Parvibaculaceae bacterium


organism_name: Balneola vulgaris


organism_name: Gammaproteobacteria bacterium


organism_name: Candidatus Obscuribacterales bacterium


organism_name: Cyclobacteriaceae bacterium


organism_name: Thalassobaculaceae bacterium


organism_name: Rickettsiales bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Paracoccaceae bacterium


organism_name: Rhodospirillales bacterium


organism_name: Winogradskyella sp.


organism_name: Ulvibacterium sp.


organism_name: Roseibium sp.


organism_name: Bythopirellula sp.


organism_name: Oceanicaulis sp.


organism_name: Novosphingobium sp.


organism_name: Ilumatobacteraceae bacterium


organism_name: Phenylobacterium sp.


organism_name: Devosia sp.


organism_name: Rhodoglobus sp.


organism_name: Pedobacter sp.


organism_name: Agrobacterium sp.


organism_name: Klebsiella pneumoniae


organism_name: Ancylobacter sp.


organism_name: Kaistia sp.


organism_name: Edaphocola sp.


organism_name: Mycobacterium sp.


organism_name: Hyphomonadaceae bacterium


organism_name: Polaromonas sp.


organism_name: Mesorhizobium sp.


organism_name: Alloboseaceae bacterium


organism_name: Bacteroidia bacterium


organism_name: Sediminibacterium sp.


organism_name: Chryseolinea sp.


organism_name: Candidatus Obscuribacterales bacterium


organism_name: Tagaea sp.


organism_name: Novosphingobium sp.


organism_name: Hydrocarboniphaga effusa


organism_name: Verrucomicrobiales bacterium


organism_name: Caulobacter sp.


organism_name: Sphingomonas leidyi


organism_name: Actinomycetes bacterium


organism_name: Bryobacteraceae bacterium


organism_name: Roseateles sp.


organism_name: Kaistia sp.


organism_name: Ferrovibrionaceae bacterium


organism_name: Burkholderiaceae bacterium


organism_name: Rhodospirillaceae bacterium


organism_name: Methanocorpusculum sp.


organism_name: Alcanivorax sp.


organism_name: Hyphomonadaceae bacterium


organism_name: Algiphilus sp.


organism_name: Limnobacter sp.


organism_name: Longimicrobiales bacterium


organism_name: Owenweeksia sp.


organism_name: uncultured Methylophaga sp.


organism_name: Cellulomonas sp.


organism_name: Rickettsiaceae bacterium


organism_name: Bremerella sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Cyclobacteriaceae bacterium


organism_name: Marinobacter sp.


organism_name: Balneolaceae bacterium


organism_name: Hyphococcus sp.


organism_name: Candidatus Megaera sp.


organism_name: Polynucleobacter necessarius


organism_name: Alphaproteobacteria bacterium


organism_name: Candidatus Midichloriaceae bacterium


organism_name: Halieaceae bacterium


organism_name: Saprospiraceae bacterium


organism_name: Escherichia coli


organism_name: Erythrobacter sp.


organism_name: Pacificispira sp.


organism_name: Paracoccaceae bacterium


organism_name: Patescibacteria group bacterium


organism_name: Rhodospirillales bacterium


organism_name: Candidatus Bandiella sp.


organism_name: Roseibium sp.


organism_name: Roseibium aggregatum


organism_name: Nitratireductor aquibiodomus


organism_name: Cyclobacteriaceae bacterium


organism_name: Oceanicaulis sp.


organism_name: Reyranella sp.


organism_name: Vicinamibacterales bacterium


organism_name: Phaeodactylibacter xiamenensis


organism_name: Pyruvatibacter mobilis


organism_name: Roseivirga seohaensis


organism_name: Flagellimonas sp.


organism_name: Brevundimonas sp.


organism_name: Hyphobacterium sp.


organism_name: Marinoscillum sp.


organism_name: Candidatus Versatilivorator sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Marinobacter algicola


organism_name: Parvibaculaceae bacterium


organism_name: Marinobacter sp.


organism_name: Thermodesulfobacteriota bacterium


organism_name: Pseudomonadales bacterium


organism_name: Ilumatobacteraceae bacterium


organism_name: Hyphococcus sp.


organism_name: Polynucleobacter necessarius


organism_name: Bacteroidales bacterium


organism_name: Hoeflea sp.


organism_name: Cyclobacteriaceae bacterium


organism_name: Maridesulfovibrio sp.


organism_name: Variovorax sp.


organism_name: Balneola sp.


organism_name: Roseivirga sp.


organism_name: Rhizobiaceae bacterium


organism_name: uncultured Pseudohongiella sp.


organism_name: Pyruvatibacter mobilis


organism_name: Phototrophicaceae bacterium


organism_name: Desulfovibrionaceae bacterium


organism_name: Allomuricauda sp.


organism_name: Roseovarius confluentis


organism_name: Motiliproteus sp.


organism_name: Putridiphycobacter sp.


organism_name: Cellvibrionaceae bacterium


organism_name: Saprospiraceae bacterium


organism_name: Parvicellaceae bacterium


organism_name: uncultured Micavibrio sp.


organism_name: Arcobacter arenosus


organism_name: Wenzhouxiangellaceae bacterium


organism_name: Phycisphaeraceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Marinicella sp.


organism_name: Arenicella sp.


organism_name: Kangiellaceae bacterium


organism_name: Rhodococcus qingshengii


organism_name: Oricola sp.


organism_name: Cryomorpha sp.


organism_name: Candidatus Endoriftia persephonae


organism_name: Bacteroidales bacterium


organism_name: Cytophagales bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Roseibium sp.


organism_name: Putridiphycobacter sp.


organism_name: Saprospiraceae bacterium


organism_name: Pseudomonadales bacterium


organism_name: Parvicellaceae bacterium


organism_name: Hyphomicrobiales bacterium


organism_name: Croceivirga sp.


organism_name: Crocinitomicaceae bacterium


organism_name: Flavipsychrobacter sp.


organism_name: Winogradskyella sp.


organism_name: Saccharicrinis sp.


organism_name: Sulfurimonas sp.


organism_name: Chitinophagaceae bacterium


organism_name: Candidatus Thiodiazotropha sp.


organism_name: Bythopirellula sp.


organism_name: Rhizobiaceae bacterium


organism_name: uncultured Nitrincola sp.


organism_name: Motiliproteus sp.


organism_name: Sunxiuqinia sp.


organism_name: Terasakiella sp.


organism_name: Kiloniella litopenaei


organism_name: Oleiphilaceae bacterium


organism_name: Marinifilum sp.


organism_name: uncultured Micavibrio sp.


organism_name: Mycobacterium sp.


organism_name: Aquimarina sp.


asm_submitter: University of Oxford

isolate: Shigella sonnei

organism_name: Shigella sonnei


organism_name: uncultured Candidatus Peribacteria bacterium


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: uncultured Muribaculaceae bacterium


organism_name: uncultured Methanosarcinales archaeon


organism_name: Acetobacteraceae bacterium


organism_name: Tepidiformaceae bacterium


organism_name: Rhodospirillaceae bacterium


organism_name: Terriglobia bacterium


organism_name: Candidatus Altimarinota bacterium


asm_submitter: Faculty of Health Sciences

organism_name: Pseudocitrobacter faecalis


excluded_from_refseq: unverified source organism


organism_name: Brucella abortus


organism_name: Spirochaetaceae bacterium


organism_name: Binatia bacterium (SeqCode)


asm_submitter: Comenius University Science Park

excluded_from_refseq: from large multi-isolate project

organism_name: Klebsiella pneumoniae


organism_name: Caldilineaceae bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Acidobacteriota bacterium


organism_name: Citrobacter freundii


organism_name: Alphaproteobacteria bacterium


organism_name: Arenicellales bacterium


organism_name: Bryobacterales bacterium


organism_name: Acidimicrobiales bacterium


organism_name: Tepidiformaceae bacterium


organism_name: Rhodococcus qingshengii


organism_name: Longimicrobiales bacterium


organism_name: Vicinamibacteria bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Gemmatimonadota bacterium


organism_name: Algihabitans sp.


organism_name: Vicinamibacterales bacterium


organism_name: Brevundimonas sp.


organism_name: Thermodesulfobacteriota bacterium


organism_name: Nitrospirales bacterium


organism_name: Thermoanaerobaculia bacterium


organism_name: Candidatus Poribacteria bacterium


organism_name: Terriglobia bacterium


organism_name: Spirochaetaceae bacterium


organism_name: Paracoccaceae bacterium


organism_name: Alloalcanivorax xenomutans


organism_name: Candidatus Latescibacterota bacterium


organism_name: Endozoicomonadaceae bacterium


organism_name: Phototrophicaceae bacterium


organism_name: Endozoicomonas sp.


organism_name: Roseibium aggregatum


organism_name: Denitrobaculum sp.


organism_name: Ilumatobacter fluminis


organism_name: Flagellimonas sp.


organism_name: Longimicrobiales bacterium


organism_name: Spirochaetia bacterium


organism_name: Arenicellales bacterium


organism_name: Oceaniradius stylonematis


organism_name: Pelagibius sp.


organism_name: Roseivirga pacifica


organism_name: Qipengyuania sp.


organism_name: Rhodococcus qingshengii


organism_name: Rhizobiaceae bacterium


organism_name: Roseibium sp.


organism_name: Dehalococcoidia bacterium


organism_name: Woeseiaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Candidatus Vondammii sp.


organism_name: Rhodothermales bacterium


organism_name: Pyruvatibacter mobilis


organism_name: Phycisphaerales bacterium


organism_name: Bauldia sp.


organism_name: Candidatus Poribacteria bacterium


organism_name: Nitratireductor rhodophyticola


organism_name: Caldilineaceae bacterium


organism_name: Candidatus Thiodiazotropha taylori


organism_name: Candidatus Azotimanducaceae bacterium


organism_name: uncultured Binatia bacterium (SeqCode)


organism_name: Spirochaetaceae bacterium


organism_name: Klebsiella pneumoniae


organism_name: Escherichia coli


organism_name: Dehalococcoidia bacterium


annotation_name: Annotation submitted by Institut Pasteur

annotation_provider: Institut Pasteur

asm_submitter: Institut Pasteur

infraspecific_name: strain=PCC 7403

organism_name: Tumidithrix helvetica PCC 7403

relation_to_type_material: assembly from type material


asm_submitter: Southern Federal University

excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: uncultured bacterium


organism_name: uncultured archaeon


asm_submitter: Instituto Carlos Chagas - Fiocruz Parana

organism_name: Pseudomonas aeruginosa


organism_name: bacterium


organism_name: Hoeflea sp.


organism_name: Nitratireductor alexandrii


organism_name: Tepidamorphaceae bacterium


organism_name: Parvibaculaceae bacterium


organism_name: Jiulongibacter sp.


organism_name: Nitratireductor sp.


organism_name: Nitratireductor rhodophyticola


organism_name: Flagellimonas oceanensis


organism_name: Rickettsiales bacterium


organism_name: Roseibium sp.


organism_name: Candidatus Latescibacterota bacterium


organism_name: Neoaquamicrobium sediminum


organism_name: Pelagibius sp.


organism_name: Pirellulaceae bacterium


organism_name: Pyruvatibacter mobilis


organism_name: Bacterioplanes sp.


organism_name: Candidatus Azotimanducaceae bacterium


organism_name: Parasphingorhabdus sp.


organism_name: Algihabitans sp.


organism_name: Roseivirga pacifica


organism_name: Pelagibacterium sp.


organism_name: Qipengyuania flava


organism_name: Paracoccaceae bacterium


organism_name: Oceanicaulis alexandrii


organism_name: Flagellimonas sp.


organism_name: uncultured Polaribacter sp.


organism_name: Alloalcanivorax xenomutans


organism_name: Roseibium album


organism_name: Reichenbachiella sp.


organism_name: Rickettsiaceae bacterium


organism_name: Candidatus Neptunichlamydia sp.


annotation_name: Annotation submitted by BIOLOGY CENTRE CAS, INSTITUTE OF HYDROBIOLOGY

excluded_from_refseq: genus undefined

organism_name: Candidatus Pelagibacterales bacterium


annotation_provider: BIOLOGY CENTRE CAS, INSTITUTE OF HYDROBIOLOGY


asm_submitter: BIOLOGY CENTRE CAS, INSTITUTE OF HYDROBIOLOGY


annotation_name: Annotation submitted by university of strasbourg

annotation_provider: university of strasbourg

asm_name: WGS MRN1

asm_submitter: university of strasbourg

organism_name: Pseudomonas mediterranea


organism_name: Zwartia planktonica (SeqCode)


organism_name: Limnohabitans kasalickyi (SeqCode)


organism_name: Leadbetterella lacustris (SeqCode)


organism_name: Caulobacter lacus (SeqCode)


organism_name: Aquidulcibacter miladensis (SeqCode)


organism_name: Planktophila grossartii (SeqCode)


organism_name: Planktophila turicensis (SeqCode)


organism_name: Polynucleobacter hahnii (SeqCode)


organism_name: Sphingomonadaceae bacterium


organism_name: Flavobacterium rarum (SeqCode)


organism_name: Zwartia lucis


organism_name: Methylophilaceae bacterium


organism_name: Rhabdaerophilum aquaticum (SeqCode)


organism_name: Tabrizicola rara (SeqCode)


organism_name: Mycobacterium aquicola (SeqCode)


organism_name: Aquidulcibacter rimovensis (SeqCode)


organism_name: Polynucleobacter hoetzingerianus


organism_name: Sphingorhabdus rara (SeqCode)


organism_name: Hydrogenophaga miladensis (SeqCode)


organism_name: Mycobacteriaceae bacterium


annotation_name: Annotation submitted by University of Bern

annotation_provider: University of Bern

asm_submitter: University of Bern

organism_name: Escherichia coli


organism_name: Rivularia sp. (in: cyanobacteria)


organism_name: Planktophila warneckei (SeqCode)


organism_name: Fimbriicoccus planktonicus (SeqCode)


organism_name: Sphingorhabdus communis (SeqCode)


organism_name: Rhodoluna miladensis (SeqCode)


organism_name: Microbacteriaceae bacterium


asm_submitter: German Federation for Biological Data

organism_name: Thermoplasmatota archaeon


organism_name: Limnohabitans simekii (SeqCode)


organism_name: Limnohabitans rimovensis (SeqCode)


organism_name: Fontibacterium medardense (SeqCode)


organism_name: Fontibacterium abundans (SeqCode)


organism_name: Candidatus Pelagibacterales bacterium


organism_name: Fontibacterium subtropicum (SeqCode)


organism_name: Fontibacterium africanum (SeqCode)


organism_name: Pelagibacter malawensis (SeqCode)


organism_name: Fontibacterium oligotrophicum (SeqCode)


organism_name: Fontibacterium universale (SeqCode)


organism_name: Salmonella enterica


organism_name: Candidatus Nanopelagicaceae bacterium


asm_submitter: IHU - Mediterranee Infection

excluded_from_refseq: unverified source organism; genome length too small

organism_name: Clostridium butyricum


organism_name: Klebsiella pneumoniae


excluded_from_refseq: RefSeq annotation failed

organism_name: Streptococcus pneumoniae


organism_name: Escherichia coli


excluded_from_refseq: genome length too small


organism_name: Staphylococcus aureus


excluded_from_refseq: annotation fails completeness check; many frameshifted proteins


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Acidimicrobiales bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Acidobacteriota bacterium


organism_name: Vicinamibacterales bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Opitutales bacterium


organism_name: Longimicrobiales bacterium


organism_name: Dehalococcoidia bacterium


excluded_from_refseq: derived from metagenome

organism_name: Candidatus Aldehydirespirator sp.


organism_name: Candidatus Poriferihabitaceae bacterium


organism_name: Candidatus Palauibacter sp.


organism_name: Paracoccaceae bacterium


organism_name: Candidatus Latescibacterota bacterium


organism_name: Candidatus Nitrosopumilus sp.


organism_name: Amylibacter sp.


organism_name: Bdellovibrionales bacterium


organism_name: Bryobacterales bacterium


organism_name: Mycoplasmatales bacterium


organism_name: Rhodothermales bacterium


organism_name: Nitrospirales bacterium


organism_name: Inquilinaceae bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Candidatus Versatilivorator sp.


organism_name: Candidatus Poriferisodalis sp.


organism_name: Myxococcota bacterium


organism_name: Chloroflexota bacterium


organism_name: Acidobacteriota bacterium


organism_name: Candidatus Spongiihabitans sp.


organism_name: Candidatus Porifericomitales bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Cenarchaeum sp.


organism_name: Phototrophicaceae bacterium


organism_name: Candidatus Rariloculaceae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Caldilineaceae bacterium


organism_name: Vicinamibacterales bacterium


organism_name: Candidatus Poribacteria bacterium


organism_name: Halieaceae bacterium


organism_name: Longimicrobiales bacterium


organism_name: Terriglobia bacterium


organism_name: Nitrospinaceae bacterium


organism_name: Bryobacterales bacterium


organism_name: Candidatus Oxydemutatoraceae bacterium


organism_name: Candidatus Poriferihabitaceae bacterium


organism_name: Acidobacteriota bacterium


organism_name: Aggregatimonas sp.


organism_name: Candidatus Foliamicus sp.


organism_name: Candidatus Nitrosopumilus sp.


organism_name: Candidatus Entotheonellaceae bacterium


organism_name: Aliivibrio sifiae


organism_name: Dehalococcoidia bacterium


organism_name: Candidatus Multivorans sp.


organism_name: Candidatus Moanibacter sp.


organism_name: Nitrosomonadaceae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Thermodesulfobacteriota bacterium


organism_name: Chloroflexota bacterium


organism_name: Terriglobia bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Candidatus Acidiferrales bacterium


asm_submitter: S. Gallicano Institute, IRCCS

organism_name: Klebsiella pneumoniae


asm_submitter: EMG

excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: uncultured Granulicatella sp.


organism_name: uncultured Atopobium sp.


organism_name: Prevotella melaninogenica


organism_name: uncultured Candidatus Saccharibacteria bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Streptococcus parasanguinis


organism_name: uncultured Leptotrichia sp.


excluded_from_refseq: RefSeq annotation failed; annotation fails MAG completeness check; derived from metagenome

organism_name: uncultured Prevotella sp.


organism_name: Actinomyces graevenitzii


organism_name: Prevotella nigrescens


organism_name: uncultured Prevotellaceae bacterium


organism_name: uncultured Alloprevotella sp.


organism_name: uncultured Selenomonas sp.


organism_name: uncultured Actinomyces sp.


organism_name: uncultured Veillonella sp.


organism_name: uncultured Stomatobaculum sp.


organism_name: Prevotella histicola


organism_name: Rothia mucilaginosa


organism_name: Fusobacterium periodonticum


organism_name: uncultured Atopobium sp.


organism_name: Alloscardovia omnicolens


organism_name: Limosilactobacillus fermentum


organism_name: uncultured Neisseria sp.


organism_name: uncultured Rothia sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: uncultured Streptococcus sp.


organism_name: Capnocytophaga leadbetteri


organism_name: Neisseria elongata


organism_name: uncultured Porphyromonas sp.


organism_name: Alloprevotella tannerae


organism_name: Stomatobaculum longum


organism_name: Capnocytophaga gingivalis


organism_name: uncultured Prevotella sp.


organism_name: uncultured bacterium


organism_name: uncultured Actinomyces sp.


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: uncultured Prevotellaceae bacterium


organism_name: Rothia mucilaginosa


organism_name: Corynebacterium argentoratense


organism_name: Veillonella tobetsuensis


organism_name: Megasphaera micronuciformis


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Isoptericola variabilis


organism_name: uncultured Lachnoanaerobaculum sp.


organism_name: Tannerella serpentiformis


organism_name: Campylobacter showae


organism_name: uncultured Streptococcus sp.


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Prevotella pallens


organism_name: uncultured Rothia sp.


organism_name: bacterium


organism_name: uncultured Francisella sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Amoebophilaceae bacterium


organism_name: Moorena producens


organism_name: Acinetobacter guillouiae


organism_name: Klebsiella pneumoniae


organism_name: uncultured Porphyromonadaceae bacterium


organism_name: Streptococcus oralis


organism_name: [Eubacterium] brachy


organism_name: Eikenella halliae


organism_name: Prevotella veroralis


organism_name: uncultured Capnocytophaga sp.


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: uncultured Atopobium sp.


organism_name: Streptococcus intermedius


organism_name: uncultured Veillonella sp.


organism_name: uncultured Catonella sp.


organism_name: Lancefieldella rimae


organism_name: Enterococcus faecalis


organism_name: uncultured Actinomyces sp.


organism_name: uncultured Bacteroidia bacterium


excluded_from_refseq: RefSeq annotation failed; derived from metagenome


organism_name: uncultured Prevotella sp.


organism_name: Scardovia wiggsiae


organism_name: Capnocytophaga gingivalis


organism_name: Cardiobacterium hominis


organism_name: Corynebacterium durum


organism_name: Lautropia mirabilis


organism_name: Leptotrichia wadei


organism_name: Actinomyces dentalis


organism_name: Lautropia dentalis


organism_name: uncultured Actinomycetaceae bacterium


organism_name: Actinomyces naeslundii


excluded_from_refseq: unverified source organism; derived from metagenome; fragmented assembly

organism_name: Fusobacterium nucleatum


organism_name: uncultured Neisseria sp.


organism_name: Megasphaera coli


organism_name: uncultured Treponema sp.


organism_name: Neisseria bacilliformis


organism_name: uncultured Leptotrichia sp.


organism_name: Filifactor alocis


organism_name: uncultured Selenomonas sp.


organism_name: uncultured Prevotella sp.


organism_name: Lachnoanaerobaculum saburreum


organism_name: Rothia mucilaginosa


organism_name: Lautropia mirabilis


organism_name: Streptococcus oralis


organism_name: uncultured Ancrocorticia sp.


organism_name: Neisseria sicca


organism_name: Prevotella conceptionensis


organism_name: Haemophilus parainfluenzae


organism_name: uncultured Prevotellaceae bacterium


organism_name: Gemella sanguinis


organism_name: Tannerella forsythia


organism_name: Rothia dentocariosa


organism_name: Actinomyces graevenitzii


organism_name: Streptococcus anginosus


organism_name: Veillonella parvula


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: Prevotella pallens


organism_name: Dialister invisus


organism_name: uncultured Prevotella sp.


organism_name: Porphyromonas gingivalis


organism_name: uncultured Rothia sp.


organism_name: Aggregatibacter aphrophilus


organism_name: Prevotella nigrescens


organism_name: uncultured Neisseria sp.


organism_name: Porphyromonas endodontalis


organism_name: Fusobacterium periodonticum


organism_name: Streptococcus oralis


organism_name: Streptococcus gordonii


organism_name: Arachnia propionica


organism_name: Capnocytophaga sputigena


organism_name: Streptococcus sanguinis


organism_name: uncultured Veillonella sp.


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: uncultured Selenomonas sp.


organism_name: uncultured Lachnoanaerobaculum sp.


organism_name: Treponema denticola


organism_name: Isoptericola variabilis


organism_name: uncultured Abiotrophia sp.


organism_name: Fusobacterium nucleatum


organism_name: Streptococcus mutans


organism_name: Kingella oralis


organism_name: Granulicatella adiacens


organism_name: uncultured Ottowia sp.


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Schaalia odontolytica


organism_name: uncultured Streptococcus sp.


organism_name: Peptostreptococcus stomatis


organism_name: Streptococcus parasanguinis


organism_name: uncultured Neisseria sp.


organism_name: uncultured Cardiobacteriaceae bacterium


organism_name: uncultured Actinomyces sp.


organism_name: Haemophilus parainfluenzae


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genus undefined

organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: uncultured Haemophilus sp.


organism_name: Bifidobacterium dentium


organism_name: Prevotella jejuni


organism_name: uncultured Prevotella sp.


excluded_from_refseq: unverified source organism; derived from metagenome; genome length too small

organism_name: Carnobacterium maltaromaticum


organism_name: uncultured Campylobacter sp.


organism_name: Centipeda noxia


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; genome length too small

organism_name: Capnocytophaga granulosa


organism_name: uncultured Propionibacterium sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: uncultured Actinomycetaceae bacterium


organism_name: Prevotella histicola


organism_name: Streptococcus parasanguinis


organism_name: uncultured Neisseria sp.


organism_name: Prevotella melaninogenica


organism_name: Corynebacterium matruchotii


organism_name: uncultured Prevotellaceae bacterium


organism_name: Centipeda artemidis


organism_name: uncultured Actinomyces sp.


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: Veillonella parvula


organism_name: Actinomyces oris


organism_name: Streptococcus sanguinis


organism_name: Capnocytophaga leadbetteri


organism_name: Rothia aeria


organism_name: uncultured Capnocytophaga sp.


organism_name: Tannerella serpentiformis


organism_name: uncultured Micrococcales bacterium


organism_name: Eggerthia catenaformis


organism_name: Leptotrichia buccalis


organism_name: uncultured Actinomycetaceae bacterium


organism_name: Rothia mucilaginosa


organism_name: Actinomyces massiliensis


organism_name: uncultured Olsenella sp.


organism_name: Neisseria elongata


organism_name: Haemophilus parainfluenzae


organism_name: uncultured Haemophilus sp.


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: Megasphaera micronuciformis


organism_name: Actinomyces gerencseriae


organism_name: uncultured Bacteroidales bacterium


organism_name: uncultured Prevotella sp.


organism_name: Lachnoanaerobaculum gingivalis


organism_name: Neisseria flavescens


organism_name: Alloprevotella tannerae


organism_name: uncultured Neisseria sp.


organism_name: uncultured Actinomyces sp.


organism_name: Schaalia odontolytica


organism_name: uncultured Porphyromonas sp.


organism_name: Parvimonas micra


organism_name: Prevotella denticola


organism_name: Streptococcus sanguinis


organism_name: Streptococcus anginosus


organism_name: uncultured Cardiobacterium sp.


organism_name: uncultured bacterium


organism_name: uncultured Prevotellaceae bacterium


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Bdellovibrionales bacterium


organism_name: uncultured Binatia bacterium (SeqCode)


organism_name: Candidatus Latescibacterota bacterium


organism_name: bacterium


organism_name: Limisphaerales bacterium


organism_name: Bryobacterales bacterium


organism_name: Caldilineaceae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Cenarchaeum sp.


organism_name: Tenacibaculum sp.


organism_name: Alkalispirochaeta sp.


organism_name: Longimicrobiales bacterium


organism_name: Leptonemataceae bacterium


excluded_from_refseq: contaminated; derived from metagenome; genus undefined

organism_name: Cyclobacteriaceae bacterium


organism_name: uncultured Maricaulis sp.


organism_name: Vicinamibacterales bacterium


organism_name: Balneolaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Chloroflexota bacterium


organism_name: Acidimicrobiales bacterium


organism_name: Arcobacteraceae bacterium


organism_name: Roseibacillus sp.


organism_name: Dehalococcoidia bacterium


organism_name: Candidatus Latescibacterota bacterium


organism_name: Phycisphaerales bacterium


organism_name: Candidatus Poribacteria bacterium


organism_name: Paracoccaceae bacterium


organism_name: uncultured candidatus Poriferisulfidus sp.


organism_name: Coxiellales bacterium


organism_name: Caldilineaceae bacterium


organism_name: Phototrophicaceae bacterium


organism_name: Bdellovibrionales bacterium


organism_name: Tepidiformaceae bacterium


organism_name: Sulfurimonas sp.


organism_name: Candidatus Azotimanducaceae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Bacteriovoracaceae bacterium


organism_name: Spiribacter sp.


organism_name: Candidatus Spongiisociaceae bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Achromobacter marplatensis


organism_name: Parvibaculaceae bacterium


organism_name: Flavicella sp.


organism_name: Nitrosopumilaceae archaeon


organism_name: Candidatus Poriferihabitaceae bacterium


organism_name: Arenicellales bacterium


organism_name: Thalassobaculaceae bacterium


organism_name: Ruegeria sp.


organism_name: Leptospirales bacterium


organism_name: Polynucleobacter yangtzensis


organism_name: Candidatus Marinacidobacterium sp.


organism_name: Nitrospirales bacterium


organism_name: Caldilineaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Bryobacterales bacterium


organism_name: Sulfurimonas sp.


organism_name: Candidatus Spongiisocius sp.


organism_name: Cyclobacteriaceae bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Bacteriovoracaceae bacterium


organism_name: Phototrophicaceae bacterium


organism_name: Spirochaetia bacterium


organism_name: Amaricoccus sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Acidimicrobiales bacterium


organism_name: Thermodesulfobacteriota bacterium


organism_name: Flavobacteriales bacterium


organism_name: Vicinamibacterales bacterium


organism_name: Chloroflexota bacterium


organism_name: uncultured Nitrincola sp.


organism_name: Arenicellales bacterium


organism_name: Nitrospirales bacterium


organism_name: Candidatus Aldehydirespirator sp.


organism_name: Lacipirellulaceae bacterium


organism_name: uncultured Binatia bacterium (SeqCode)


organism_name: Dehalococcoidia bacterium


organism_name: Cyclobacteriaceae bacterium


organism_name: Halarcobacter sp.


organism_name: Sansalvadorimonas sp.


organism_name: Hyphococcus sp.


organism_name: Phototrophicaceae bacterium


organism_name: Longimicrobiales bacterium


organism_name: Methylobacterium sp.


organism_name: Candidatus Spongiisociaceae bacterium


organism_name: Spirochaetia bacterium


annotation_name: Annotation submitted by Genoscope CEA

annotation_provider: Genoscope CEA

asm_submitter: Genoscope CEA

organism_name: Hyphomicrobium sp. 1Nfss2.1


organism_name: uncultured Granulicatella sp.


organism_name: Haemophilus parainfluenzae


organism_name: Candidatus Pelagibacterales bacterium


organism_name: Actinomyces graevenitzii


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: Prevotella jejuni


organism_name: uncultured Prevotellaceae bacterium


organism_name: uncultured Prevotella sp.


organism_name: uncultured Capnocytophaga sp.


organism_name: uncultured Lachnospiraceae bacterium


organism_name: Capnocytophaga gingivalis


organism_name: Neisseria meningitidis


organism_name: Rothia mucilaginosa


organism_name: Porphyromonas endodontalis


organism_name: Prevotella melaninogenica


organism_name: uncultured Solobacterium sp.


excluded_from_refseq: RefSeq annotation failed; annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome

organism_name: uncultured Rhodococcus sp.


organism_name: uncultured Atopobium sp.


organism_name: uncultured Selenomonas sp.


organism_name: Oribacterium sinus


organism_name: uncultured Lachnoanaerobaculum sp.


organism_name: uncultured Actinomyces sp.


organism_name: Prevotella pallens


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: uncultured Prevotella sp.


organism_name: Streptococcus parasanguinis


organism_name: uncultured Veillonella sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Candidatus Pelagibacterales bacterium


organism_name: [Eubacterium] brachy


organism_name: uncultured Stomatobaculum sp.


organism_name: uncultured Neisseria sp.


organism_name: uncultured Porphyromonas sp.


organism_name: Fusobacterium periodonticum


organism_name: Streptococcus salivarius


organism_name: uncultured Alloprevotella sp.


organism_name: uncultured Johnsonella sp.


organism_name: uncultured Leptotrichia sp.


organism_name: Tannerella serpentiformis


organism_name: uncultured Streptococcus sp.


organism_name: uncultured Haemophilus sp.


organism_name: Prevotella jejuni


excluded_from_refseq: derived from metagenome

organism_name: Megasphaera micronuciformis


organism_name: Veillonella tobetsuensis


organism_name: Klebsiella pneumoniae


organism_name: uncultured Aggregatibacter sp.


organism_name: uncultured Solobacterium sp.


organism_name: uncultured Veillonella sp.


organism_name: uncultured Actinomyces sp.


organism_name: uncultured bacterium


organism_name: Lachnoanaerobaculum saburreum


organism_name: uncultured Neisseria sp.


organism_name: Veillonella parvula


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: Actinomyces graevenitzii


organism_name: uncultured Prevotella sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Schaalia cardiffensis


organism_name: Haemophilus parainfluenzae


organism_name: Capnocytophaga sputigena


organism_name: uncultured Porphyromonas sp.


organism_name: uncultured Prevotellaceae bacterium


organism_name: uncultured Actinomycetaceae bacterium


organism_name: Parvimonas micra


organism_name: Cardiobacterium hominis


organism_name: Gemella haemolysans


organism_name: Lautropia mirabilis


organism_name: Streptococcus pseudopneumoniae


organism_name: uncultured Metamycoplasma sp.


organism_name: Alloprevotella tannerae


organism_name: uncultured Flavobacteriaceae bacterium


organism_name: Haemophilus paraphrohaemolyticus


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Peptostreptococcus stomatis


organism_name: Rothia mucilaginosa


organism_name: [Eubacterium] saphenum


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Streptococcus vestibularis


organism_name: Streptococcus mitis


organism_name: Granulicatella adiacens


organism_name: uncultured Prevotella sp.


organism_name: Actinomyces oris


organism_name: Rothia aeria


organism_name: Corynebacterium matruchotii


organism_name: uncultured bacterium


organism_name: uncultured Caviibacter sp.


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: Streptococcus sanguinis


organism_name: Capnocytophaga granulosa


organism_name: Pseudomonas veronii


organism_name: Lautropia mirabilis


organism_name: uncultured Alloprevotella sp.


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; genome length too small

organism_name: Prevotella pallens


organism_name: Prevotella melaninogenica


organism_name: Porphyromonas gingivalis


organism_name: uncultured Leptotrichia sp.


organism_name: Haemophilus parainfluenzae


organism_name: uncultured Prevotella sp.


organism_name: Neisseria cinerea


organism_name: uncultured Prevotellaceae bacterium


organism_name: Staphylococcus aureus


organism_name: uncultured Porphyromonas sp.


organism_name: Alloprevotella tannerae


organism_name: [Eubacterium] sulci


organism_name: Streptococcus mitis


organism_name: Megasphaera micronuciformis


organism_name: Prevotella intermedia


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: Fusobacterium hwasookii


excluded_from_refseq: contaminated; derived from metagenome

organism_name: uncultured Streptococcus sp.


organism_name: uncultured Treponema sp.


organism_name: uncultured Veillonella sp.


organism_name: Granulicatella elegans


organism_name: uncultured Abiotrophia sp.


organism_name: Porphyromonas endodontalis


organism_name: Prevotella koreensis


organism_name: uncultured Propionibacterium sp.


organism_name: uncultured Stomatobaculum sp.


organism_name: Streptococcus oralis


organism_name: uncultured Porphyromonas sp.


organism_name: Rothia dentocariosa


organism_name: Prevotella denticola


organism_name: uncultured Spirochaetales bacterium


organism_name: uncultured Prevotella sp.


organism_name: uncultured Rothia sp.


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Neisseria elongata


organism_name: Tannerella forsythia


excluded_from_refseq: RefSeq annotation failed; annotation fails MAG completeness check; derived from metagenome

organism_name: uncultured Capnocytophaga sp.


organism_name: uncultured Treponema sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: uncultured Streptococcus sp.


organism_name: Actinomyces bouchesdurhonensis


organism_name: uncultured Actinomyces sp.


excluded_from_refseq: RefSeq annotation failed; derived from metagenome


organism_name: Prevotella intermedia


organism_name: Limosilactobacillus mucosae


organism_name: Streptococcus mutans


organism_name: uncultured bacterium


organism_name: uncultured Ottowia sp.


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: Rothia dentocariosa


organism_name: uncultured Eubacteriales bacterium


organism_name: uncultured Neisseria sp.


organism_name: Capnocytophaga leadbetteri


organism_name: Bergeyella cardium


organism_name: Haemophilus haemolyticus


organism_name: Prevotella melaninogenica


organism_name: uncultured Peptostreptococcus sp.


organism_name: uncultured Capnocytophaga sp.


organism_name: uncultured Veillonella sp.


organism_name: uncultured Porphyromonas sp.


organism_name: uncultured Prevotellaceae bacterium


organism_name: uncultured Streptococcus sp.


organism_name: Rothia mucilaginosa


organism_name: [Eubacterium] saphenum


organism_name: Rothia aeria


organism_name: Capnocytophaga gingivalis


organism_name: Bifidobacterium dentium


organism_name: uncultured Atopobium sp.


organism_name: Porphyromonas endodontalis


organism_name: uncultured Neisseria sp.


organism_name: Tannerella serpentiformis


organism_name: Prevotella aurantiaca


organism_name: uncultured Granulicatella sp.


organism_name: uncultured Carnobacteriaceae bacterium


organism_name: uncultured Candidatus Saccharibacteria bacterium


organism_name: Abiotrophia defectiva


organism_name: uncultured Capnocytophaga sp.


organism_name: uncultured Ottowia sp.


organism_name: uncultured Streptococcus sp.


organism_name: Kingella oralis


organism_name: Lautropia dentalis


organism_name: uncultured Prevotella sp.


organism_name: uncultured Actinomycetaceae bacterium


organism_name: uncultured Bergeyella sp.


excluded_from_refseq: unverified source organism; derived from metagenome


organism_name: uncultured Prevotellaceae bacterium


organism_name: uncultured Haemophilus sp.


organism_name: uncultured Stomatobaculum sp.


organism_name: uncultured Aggregatibacter sp.


organism_name: uncultured Bacilli bacterium


organism_name: Necropsobacter rosorum


asm_submitter: WELLCOME SANGER INSTITUTE

organism_name: Abditibacterium sp.


organism_name: Chamaesiphon sp.


organism_name: Asticcacaulis sp.


organism_name: Capsulimonadaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Chitinophagaceae bacterium


organism_name: Bryobacteraceae bacterium


organism_name: Beijerinckiaceae bacterium


organism_name: Caldimonas sp.


organism_name: Actinoplanes sp.


organism_name: Chthonomonadaceae bacterium


organism_name: Acetobacteraceae bacterium


organism_name: Aggregatilineales bacterium


asm_submitter: Insititute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana

organism_name: [Borrelia] lusitaniae


organism_name: Vicinamibacteria bacterium


organism_name: Phototrophicaceae bacterium


organism_name: Candidatus Poribacteria bacterium


organism_name: Vicinamibacterales bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Flavobacteriales bacterium


organism_name: Ferruginibacter sp.


organism_name: Candidatus Azophilus sp.


organism_name: Candidatus Nitrosopumilus sp.


organism_name: Cyclobacteriaceae bacterium


organism_name: Halieaceae bacterium


organism_name: Candidatus Multivorans sp.


organism_name: Myxococcota bacterium


organism_name: Rhodothermales bacterium


organism_name: Hymenobacter sp.


organism_name: Rickettsiales bacterium


organism_name: Bryobacterales bacterium


organism_name: Flavisolibacter sp.


organism_name: Rhodospirillales bacterium


organism_name: Deinococcus sp.


organism_name: Candidatus Porifericomitales bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Rhizobiaceae bacterium


organism_name: Pyrinomonadaceae bacterium


organism_name: Hyphomicrobiaceae bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Candidatus Poribacteria bacterium


organism_name: Rhodomicrobiaceae bacterium


organism_name: Balneolaceae bacterium


organism_name: Arsenicibacter sp.


organism_name: Thermohalobaculum sp.


organism_name: Candidatus Poriferisodalaceae bacterium


organism_name: Ekhidna sp.


organism_name: Methylophilaceae bacterium


organism_name: Terriglobia bacterium


organism_name: Ilyomonas sp.


organism_name: Candidatus Acidiferrales bacterium


organism_name: Chloroflexota bacterium


organism_name: Caldilineaceae bacterium


organism_name: Micropepsaceae bacterium


organism_name: Bryobacterales bacterium


organism_name: Hyphomicrobiales bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Methylococcales bacterium


organism_name: bacterium


organism_name: uncultured Binatia bacterium (SeqCode)


organism_name: Methyloglobulus sp.


organism_name: Candidatus Poribacteria bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Tepidiformaceae bacterium


organism_name: Bdellovibrionales bacterium


organism_name: Flavisolibacter sp.


organism_name: Rhodospirillales bacterium


organism_name: Nakamurella sp.


organism_name: Flavobacteriaceae bacterium


organism_name: Trueperaceae bacterium


organism_name: Candidatus Poriferihabitaceae bacterium


organism_name: Deinococcus sp.


organism_name: Nitrospira sp.


organism_name: Pyrinomonadaceae bacterium


organism_name: Tepidisphaeraceae bacterium


organism_name: Chloroflexota bacterium


organism_name: Nitrospirales bacterium


organism_name: Ferruginibacter sp.


organism_name: Acidobacteriota bacterium


organism_name: Candidatus Nitrosopumilus sp.


organism_name: Tepidiformaceae bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Candidatus Spongiihabitans sp.


organism_name: Paracoccaceae bacterium


organism_name: bacterium


organism_name: Vicinamibacterales bacterium


organism_name: Saprospiraceae bacterium


organism_name: Crocinitomicaceae bacterium


organism_name: uncultured Binatia bacterium (SeqCode)


organism_name: Roseivirga sp.


organism_name: Nitrosomonadaceae bacterium


organism_name: Candidatus Multivoradales bacterium


organism_name: Candidatus Azotimanducaceae bacterium


organism_name: Candidatus Latescibacterota bacterium


organism_name: Candidatus Palauibacter sp.


organism_name: Bryobacterales bacterium


organism_name: Caldilineaceae bacterium


organism_name: Rhizobiaceae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Candidatus Spongiisociaceae bacterium


organism_name: Rhodothermales bacterium


organism_name: Candidatus Nitrosopumilus sp.


organism_name: Longimicrobiales bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Nitrospirales bacterium


organism_name: Chloroflexota bacterium


organism_name: Candidatus Poribacteria bacterium


organism_name: Gemmatimonadales bacterium


organism_name: Qipengyuania sp.


organism_name: Ulvibacterium sp.


organism_name: Pseudomonadales bacterium


organism_name: Candidatus Latescibacterota bacterium


organism_name: Bryobacterales bacterium


organism_name: bacterium


organism_name: Parvibaculaceae bacterium


organism_name: Phototrophicaceae bacterium


organism_name: Roseovarius confluentis


organism_name: Planctomycetota bacterium


organism_name: Cypionkella sp.


organism_name: Longimicrobiales bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Urechidicola sp.


organism_name: Phormidesmis sp.


organism_name: Alteromonadaceae bacterium


organism_name: Fimbriimonas sp.


organism_name: Flagellimonas alvinocaridis


organism_name: Acidobacteriota bacterium


organism_name: Candidatus Poriferihabitaceae bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Rhizobiaceae bacterium


organism_name: Candidatus Aldehydirespirator sp.


organism_name: Candidatus Latescibacterota bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Anaerolineales bacterium


organism_name: Kaistiaceae bacterium


organism_name: Spirosomataceae bacterium


organism_name: Sphingomonas sp.


organism_name: Dehalococcoidia bacterium


organism_name: Candidatus Multivoradales bacterium


organism_name: Cellvibrionaceae bacterium


organism_name: Candidatus Moanibacter sp.


organism_name: Rickettsiales bacterium


organism_name: Thermodesulfobacteriota bacterium


organism_name: uncultured Methylophilus sp.


organism_name: Phototrophicaceae bacterium


organism_name: Vicinamibacterales bacterium


organism_name: Pelagibacterium sp.


organism_name: Fidelibacterota bacterium


organism_name: Longimicrobiales bacterium


organism_name: Acidobacteriota bacterium


organism_name: Pelagibius sp.


organism_name: Candidatus Foliamicus sp.


organism_name: Candidatus Latescibacterota bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Antarctobacter sp.


organism_name: Dehalococcoidia bacterium


organism_name: Lacipirellulaceae bacterium


organism_name: Oceaniradius stylonematis


organism_name: Jiulongibacter sp.


organism_name: Fimbriimonas sp.


organism_name: bacterium


organism_name: Capsulimonadaceae bacterium


organism_name: Vicinamibacterales bacterium


organism_name: Pirellulales bacterium


organism_name: Candidatus Nitrosopumilus sp.


organism_name: Gemmatimonadales bacterium


organism_name: Acidobacteriota bacterium


organism_name: Chloroflexota bacterium


organism_name: Nitrospinales bacterium


organism_name: Rubrivivax sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Candidatus Poribacteria bacterium


organism_name: Oceanicaulis sp.


organism_name: Dehalococcoidia bacterium


organism_name: Beijerinckiaceae bacterium


organism_name: Sphingomonas sp.


organism_name: Spirochaetota bacterium


organism_name: Longimicrobiales bacterium


organism_name: Saprospiraceae bacterium


organism_name: Deinococcales bacterium


organism_name: Ferruginibacter sp.


organism_name: Stigonema sp.


organism_name: Spirosomataceae bacterium


organism_name: Spirochaetia bacterium


organism_name: Candidatus Poriferihabitaceae bacterium


organism_name: Lacunisphaera sp.


organism_name: Acidobacteriota bacterium


organism_name: Inquilinaceae bacterium


organism_name: Pedobacter sp.


organism_name: Psychromonadaceae bacterium


organism_name: Terriglobia bacterium


organism_name: Reyranella sp.


organism_name: Hoeflea sp.


organism_name: Flagellimonas sp.


organism_name: Erythrobacter sp.


organism_name: Bacteroidia bacterium


organism_name: Balneolaceae bacterium


organism_name: Ancylobacter sp.


organism_name: Algiphilus sp.


organism_name: Pyruvatibacter mobilis


organism_name: Demequinaceae bacterium


organism_name: Qipengyuania flava


organism_name: Winogradskyella sp.


organism_name: Enterobacterales bacterium


organism_name: Candidatus Marinacidobacterium sp.


organism_name: Phycisphaerales bacterium


organism_name: Opitutales bacterium


organism_name: Mariniblastus sp.


organism_name: Candidatus Altimarinota bacterium


organism_name: Stappia sp.


organism_name: Tepidamorphaceae bacterium


organism_name: Roseibium sp.


organism_name: Paracoccaceae bacterium


organism_name: Rhodococcus qingshengii


organism_name: Gemmatimonadales bacterium


organism_name: Planctomycetota bacterium


organism_name: Vicinamibacterales bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Hyphomicrobiaceae bacterium


organism_name: Rhodothermales bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Pyruvatibacter mobilis


organism_name: Inquilinaceae bacterium


organism_name: Rhizobiaceae bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Myxococcota bacterium


organism_name: Alloalcanivorax xenomutans


organism_name: Candidatus Multivoradales bacterium


excluded_from_refseq: genus undefined

organism_name: Candidatus Magnetomoraceae bacterium gMMP-15


organism_name: Candidatus Magnetomoraceae bacterium gMMP-13


organism_name: Candidatus Magnetomoraceae bacterium gMMP-1


asm_submitter: UANTW

organism_name: Bacillus velezensis


organism_name: Bacillus pumilus


organism_name: Bacillus subtilis


organism_name: Bacillus licheniformis


organism_name: Clostridium butyricum


organism_name: Leptothrix sp. (in: b-proteobacteria)


organism_name: Methylophagaceae bacterium


organism_name: Amylibacter sp.


organism_name: Candidatus Thioglobus sp.


organism_name: Methyloprofundus sp.


excluded_from_refseq: genome length too large


organism_name: Candidatus Ruthturnera calyptogenae


asm_submitter: dtu national food institute

excluded_from_refseq: from large multi-isolate project

organism_name: Escherichia coli


excluded_from_refseq: contaminated; from large multi-isolate project


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


organism_name: Salmonella enterica subsp. enterica serovar Derby


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium var. monophasic 4,[5],12:i:-


annotation_name: Annotation submitted by Uppsala University

annotation_provider: Uppsala University

asm_submitter: Uppsala University

organism_name: Wolbachia pipientis


infraspecific_name: strain=wSptPLR-PLUS

isolate: PLR


infraspecific_name: strain=wPauRP

isolate: RP


infraspecific_name: strain=wTroSS

isolate: SS


organism_name: Salmonella enterica subsp. enterica serovar Infantis


organism_name: Salmonella enterica subsp. enterica serovar Dublin


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


excluded_from_refseq: unverified source organism; from large multi-isolate project


excluded_from_refseq: unverified source organism; annotation fails completeness check


organism_name: Salmonella enterica subsp. enterica serovar Bovismorbificans


organism_name: Salmonella enterica subsp. enterica serovar Panama


isolate: SALMO-NVWA 3.57


organism_name: Salmonella enterica subsp. enterica


isolate: SALMO NVWA 3.70


isolate: SALMO-NVWA 4.51


isolate: SALMO-NVWA 3.62


excluded_from_refseq: contaminated; unverified source organism; annotation fails completeness check


excluded_from_refseq: derived from metagenome

organism_name: Abditibacterium sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Acetobacteraceae bacterium


organism_name: Sphingomonas sp.


organism_name: Tepidisphaeraceae bacterium


organism_name: Deinococcus sp.


organism_name: Sphingomonadaceae bacterium


organism_name: Chlamydiales bacterium


organism_name: Polaribacter sp.


organism_name: uncultured Colwellia sp.


organism_name: Fibrobacteria bacterium


organism_name: Bryobacterales bacterium


organism_name: Dehalococcoidia bacterium


organism_name: bacterium


organism_name: Candidatus Aldehydirespirator sp.


organism_name: Candidatus Poribacteria bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Caldilineaceae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Rubritalea sp.


organism_name: Ekhidna sp.


organism_name: Acidobacteriota bacterium


organism_name: Spirochaetia bacterium


organism_name: Rhodothermales bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: uncultured Pseudohongiella sp.


organism_name: Vicinamibacterales bacterium


organism_name: Endozoicomonas sp.


organism_name: Candidatus Spongiihabitans sp.


organism_name: Chloroflexota bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Candidatus Latescibacterota bacterium


organism_name: Rhodococcus qingshengii


organism_name: Candidatus Poribacteria bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Candidatus Nitrosopumilus sp.


organism_name: bacterium


organism_name: Leptospiria bacterium


organism_name: Mycoplasmatales bacterium


organism_name: Candidatus Azotimanducaceae bacterium


organism_name: Bdellovibrionales bacterium


organism_name: Candidatus Palauibacter sp.


organism_name: Amylibacter sp.


organism_name: Paracoccaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: uncultured Binatia bacterium (SeqCode)


organism_name: Caldilineaceae bacterium


organism_name: Acinetobacter guillouiae


organism_name: Dehalococcoidia bacterium


organism_name: Endozoicomonadaceae bacterium


organism_name: Delftia acidovorans


organism_name: Nitrospirales bacterium


organism_name: Pseudomonas lactis


organism_name: Gammaproteobacteria bacterium


organism_name: Agrobacterium cavarae


organism_name: Phototrophicaceae bacterium


organism_name: Candidatus Foliamicus sp.


organism_name: Acinetobacter sp.


organism_name: Methylobacterium sp.


organism_name: Nitrosopumilaceae archaeon


organism_name: Candidatus Poriferihabitaceae bacterium


organism_name: Leptonemataceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Leptospiria bacterium


organism_name: Acidobacteriota bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Candidatus Latescibacterota bacterium


organism_name: Candidatus Aldehydirespirator sp.


organism_name: Pararhizobium sp.


organism_name: uncultured Binatia bacterium (SeqCode)


organism_name: Nitrospinales bacterium


organism_name: Delftia acidovorans


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; many frameshifted proteins

organism_name: Acinetobacter guillouiae


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; many frameshifted proteins


organism_name: Phototrophicaceae bacterium


organism_name: Acidimicrobiales bacterium


organism_name: Candidatus Pelagibacter sp.


organism_name: Candidatus Poribacteria bacterium


organism_name: Paracoccaceae bacterium


organism_name: Hyphomonadaceae bacterium


organism_name: Erythrobacter sp.


organism_name: Cellvibrionaceae bacterium


organism_name: Longimicrobiales bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Candidatus Multivorans sp.


organism_name: Candidatus Rariloculaceae bacterium


organism_name: Flavobacterium sp.


organism_name: Dehalococcoidia bacterium


organism_name: Rickettsiales bacterium


organism_name: Rhodospirillales bacterium


organism_name: Terriglobia bacterium


organism_name: Roseateles sp.


organism_name: Gammaproteobacteria bacterium


organism_name: uncultured Pseudohongiella sp.


organism_name: Candidatus Poribacteria bacterium


organism_name: Vicinamibacterales bacterium


organism_name: Opitutales bacterium


organism_name: Phycisphaerales bacterium


organism_name: Brevundimonas sp.


organism_name: Cardiobacteriaceae bacterium


organism_name: Bacteroidia bacterium


organism_name: Delftia acidovorans


organism_name: Candidatus Poriferihabitaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Candidatus Versatilivorator sp.


organism_name: Candidatus Marinacidobacterium sp.


organism_name: Rhodospirillaceae bacterium


organism_name: Terriglobia bacterium


organism_name: Candidatus Nitrosopumilus sp.


organism_name: Flavobacteriales bacterium


organism_name: Bdellovibrionales bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Chloroflexota bacterium


organism_name: Achromobacter marplatensis


organism_name: Rhodothermales bacterium


organism_name: Spirochaetia bacterium


organism_name: bacterium


organism_name: Vicinamibacterales bacterium


organism_name: Halioglobus sp.


organism_name: Arenicellales bacterium


organism_name: Candidatus Spongiisociaceae bacterium


organism_name: Cognatundibacterium curvum


organism_name: Candidatus Poribacteria bacterium


organism_name: Candidatus Poriferisodalis sp.


organism_name: Tepidiformaceae bacterium


organism_name: Leptonemataceae bacterium


organism_name: Candidatus Rariloculus sp.


organism_name: Candidatus Poriferihabitaceae bacterium


organism_name: Acidobacteriota bacterium


organism_name: Terriglobia bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Chloroflexota bacterium


organism_name: Nitrospinales bacterium


organism_name: Thermodesulfobacteriota bacterium


organism_name: Bacteroidia bacterium


organism_name: Nitrospirales bacterium


organism_name: Longimicrobiales bacterium


organism_name: Candidatus Latescibacterota bacterium


organism_name: Botrimarina sp.


organism_name: Vicinamibacterales bacterium


organism_name: Rhodothermales bacterium


organism_name: uncultured Micavibrio sp.


organism_name: Saprospiraceae bacterium


organism_name: Pseudomonadales bacterium


excluded_from_refseq: contaminated; derived from metagenome; genome length too large; genus undefined

organism_name: Metamycoplasmataceae bacterium


organism_name: Bryobacterales bacterium


organism_name: Chryseobacterium gambrini


organism_name: Chitinophagaceae bacterium


organism_name: Spirochaetia bacterium


organism_name: Parvularculaceae bacterium


organism_name: Lacipirellulaceae bacterium


organism_name: Hyphomonadaceae bacterium


organism_name: Thermohalobaculum sp.


organism_name: Methyloligellaceae bacterium


organism_name: Leptolyngbyaceae cyanobacterium


organism_name: Paracoccaceae bacterium


organism_name: Brevundimonas sp.


organism_name: Dehalococcoidia bacterium


organism_name: Vicinamibacterales bacterium


organism_name: Candidatus Nitrosopumilus sp.


organism_name: Candidatus Endoriftia persephonae


organism_name: Rhodococcus qingshengii


organism_name: Acidimicrobiales bacterium


excluded_from_refseq: contaminated; derived from metagenome; genus undefined

organism_name: Limisphaerales bacterium


organism_name: Mariniblastus sp.


organism_name: Spirochaetia bacterium


asm_submitter: Comenius University Science Park

organism_name: Salmonella enterica


organism_name: Cyclobacteriaceae bacterium


organism_name: Escherichia coli


organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


excluded_from_refseq: unverified source organism


organism_name: Salmonella enterica subsp. enterica serovar Enteritidis


organism_name: Salmonella enterica subsp. enterica serovar Infantis


excluded_from_refseq: contaminated; unverified source organism


organism_name: Salmonella enterica subsp. enterica serovar Minnesota


organism_name: Staphylococcus aureus


organism_name: Salmonella enterica subsp. enterica serovar London


organism_name: Salmonella enterica subsp. enterica serovar Havana


organism_name: Salmonella enterica subsp. enterica serovar Paratyphi B


organism_name: Salmonella enterica subsp. enterica serovar Liverpool


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Chthoniobacterales bacterium


organism_name: Salmonella enterica subsp. enterica serovar Heidelberg


organism_name: Wolbachia pipientis


asm_submitter: UNIVERSITY OF MANCHESTER

organism_name: Streptococcus pneumoniae


organism_name: Dehalococcoidia bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Pseudomonadales bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Ekhidna sp.


organism_name: Cyclobacteriaceae bacterium


organism_name: Parvibaculaceae bacterium


organism_name: Salibacteraceae bacterium


organism_name: Hyphococcus sp.


organism_name: Parvicellaceae bacterium


organism_name: Cytophagales bacterium


organism_name: Minisyncoccota bacterium


organism_name: Vicingaceae bacterium


organism_name: Roseivirga sp.


organism_name: Gracilimonas sp.


organism_name: Balneola sp.


organism_name: Balneolaceae bacterium


organism_name: Boseongicola sp.


excluded_from_refseq: genus undefined

organism_name: Candidatus Nanopelagicaceae bacterium


organism_name: Paracoccaceae bacterium


organism_name: Pseudomonadales bacterium


organism_name: uncultured Pseudohongiella sp.


organism_name: Cyclobacteriaceae bacterium


organism_name: Calditrichales bacterium


organism_name: Pyruvatibacter mobilis


asm_submitter: Centre International de Recherche en Infectiologie

organism_name: Serratia bockelmannii


organism_name: Serratia marcescens


organism_name: actinobacterium SCGC AAA044-D11


excluded_from_refseq: fragmented assembly


organism_name: Candidatus Planktophila dulcis


organism_name: Candidatus Planktophila versatilis


organism_name: Candidatus Planktophila vernalis


asm_submitter: Genopole Institut Pasteur

organism_name: Streptococcus gallolyticus subsp. gallolyticus


excluded_from_refseq: from large multi-isolate project

organism_name: Klebsiella pneumoniae


organism_name: Hyphomicrobiales bacterium


organism_name: Stappiaceae bacterium


excluded_from_refseq: RefSeq annotation failed

organism_name: Streptococcus pneumoniae


organism_name: Delftia acidovorans


organism_name: Amoebophilaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Rhodococcus qingshengii


organism_name: Enterobacter hormaechei


asm_submitter: ISTITUTO ZOOPROFILATTICO SPERIMENTALE DELLE VENEZIE

organism_name: Salmonella enterica subsp. enterica serovar Umbilo


annotation_name: Annotation submitted by Institute for Molecular Bioscience

annotation_provider: Institute for Molecular Bioscience

asm_submitter: Institute for Molecular Bioscience

organism_name: Bacillus subtilis


organism_name: Bacillus vallismortis


organism_name: Streptococcus sp. 1643


asm_submitter: Indian Biological Data Centre

excluded_from_refseq: contaminated

isolate: SAMIN0017120-Comprehensive Genomic Analysis of Mixta calida Isolated from the Faecal Sample of a Tuberculosis Patient in India

organism_name: Mixta calida


organism_name: Acidobacteriaceae bacterium


organism_name: Beijerinckiaceae bacterium


organism_name: Acidimicrobiales bacterium


organism_name: Acetobacteraceae bacterium


organism_name: Acidocella sp.


organism_name: Parvibaculaceae bacterium


organism_name: Roseibium sp.


excluded_from_refseq: RefSeq annotation failed; derived from metagenome

organism_name: uncultured Pseudomonas sp.


organism_name: Lichenicoccus sp.


organism_name: Granulicella sp.


organism_name: Candidatus Thioglobus sp.


organism_name: Stappia sp.


organism_name: Hanamia sp.


organism_name: Rhodopila sp.


organism_name: Terriglobus sp.


organism_name: Flavipsychrobacter sp.


organism_name: Bryobacteraceae bacterium


organism_name: Novosphingobium sp.


organism_name: Sedimenticolaceae bacterium


organism_name: Henriciella sp.


organism_name: Methylomarinum sp.


organism_name: Roseovarius sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Mycobacterium sp.


organism_name: Candidatus Lustribacter sp.


organism_name: Acidobacteriaceae bacterium


organism_name: Capsulimonadaceae bacterium


organism_name: Spirochaetota bacterium


organism_name: Lichenihabitans sp.


organism_name: Thioclava sp.


organism_name: Profundibacter sp.


organism_name: Rhodopila sp.


organism_name: Edaphobacter sp.


organism_name: Cytophagales bacterium


organism_name: Alteromonas macleodii


excluded_from_refseq: contaminated; derived from metagenome; genome length too large

organism_name: Rhodococcus qingshengii


organism_name: Flavobacteriales bacterium


excluded_from_refseq: derived from metagenome

organism_name: Terriglobus sp.


organism_name: Mucilaginibacter sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Flavobacteriaceae bacterium


organism_name: Paracoccaceae bacterium


organism_name: Abditibacteriaceae bacterium


organism_name: Gilvibacter sp.


organism_name: Nakamurella sp.


organism_name: Bryobacteraceae bacterium


organism_name: Roseibium aggregatum


organism_name: Caulobacteraceae bacterium


organism_name: Beijerinckiaceae bacterium


organism_name: Phormidesmis sp.


organism_name: Marinobacter adhaerens


organism_name: Pseudomonas edaphica


organism_name: Gammaproteobacteria bacterium


organism_name: Saprospiraceae bacterium


organism_name: Capsulimonadaceae bacterium


organism_name: Methylobacterium sp.


organism_name: Acetobacteraceae bacterium


organism_name: Rhodopila sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Brevundimonas sp.


organism_name: Flavobacterium sp.


organism_name: Ilyomonas sp.


organism_name: Edaphobacter sp.


organism_name: Bryobacteraceae bacterium


organism_name: Granulicella sp.


organism_name: Roseivirga sp.


organism_name: Isosphaeraceae bacterium


organism_name: Solirubrobacteraceae bacterium


organism_name: Streptosporangiaceae bacterium


organism_name: Lichenihabitans sp.


organism_name: Marinobacter salarius


organism_name: Marinobacter salsuginis


organism_name: Lichenicoccus sp.


organism_name: Candidatus Azotimanducaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Alteromonadaceae bacterium


organism_name: Flagellimonas sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Candidatus Ruthturnera calyptogenae


organism_name: Beijerinckiaceae bacterium


organism_name: Cardiobacteriaceae bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Nitratireductor alexandrii


organism_name: Caulobacteraceae bacterium


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Lapillicoccus sp.


organism_name: Candidatus Lustribacter sp.


organism_name: Rhodococcus qingshengii


organism_name: Rhodopila sp.


organism_name: Candidatus Arcticimaribacter sp.


organism_name: Qipengyuania sp.


organism_name: Bryobacteraceae bacterium


organism_name: Chthonomonadaceae bacterium


organism_name: Capsulimonadaceae bacterium


organism_name: Flavobacteriales bacterium


organism_name: Nakamurella sp.


organism_name: Antarctobacter sp.


organism_name: Granulicella sp.


annotation_name: Annotation submitted by Haukeland University Hospital

annotation_provider: Haukeland University Hospital

asm_submitter: Haukeland University Hospital

organism_name: Fusobacterium paranimalis


organism_name: Mycoplasmopsis arginini


asm_submitter: Helmholtz Institute for Functional Marine Biodiversity

isolate: Pelagimonas varians SH4-1

organism_name: Pelagimonas varians


organism_name: Cyclobacteriaceae bacterium


organism_name: Brevundimonas sp.


organism_name: Actinomycetes bacterium


organism_name: Gemmataceae bacterium


organism_name: Ferrovibrio sp.


organism_name: Burkholderiaceae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Alteromonadaceae bacterium


organism_name: Chitinophagaceae bacterium


organism_name: Ancylobacter sp.


organism_name: Bacteroidia bacterium


organism_name: Henriciella sp.


organism_name: Hydrocarboniphaga sp.


organism_name: Hyphomicrobiaceae bacterium


organism_name: Burkholderiales bacterium


organism_name: Hyphomonadaceae bacterium


organism_name: Caulobacteraceae bacterium


organism_name: Kaistia sp.


organism_name: Dinoroseobacter sp.


organism_name: Croceimicrobium sp.


organism_name: Caulobacter sp.


organism_name: Brevundimonas sp.


organism_name: Bryobacteraceae bacterium


organism_name: Allorhizobium sp.


organism_name: Isosphaeraceae bacterium


organism_name: Acidovorax sp.


organism_name: Acidimicrobiales bacterium


organism_name: Dyadobacter sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Aquabacter sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Burkholderiales bacterium


organism_name: Aestuariivirga sp.


organism_name: Gemmatimonas sp.


organism_name: Aminobacter sp.


organism_name: Ilumatobacteraceae bacterium


organism_name: Sphingobium sp.


organism_name: Lysobacterales bacterium


organism_name: Pararhizobium sp.


organism_name: Roseivirga sp.


organism_name: Methylibium sp.


organism_name: Reyranella sp.


organism_name: Pseudorhodoferax sp.


organism_name: Lacipirellula sp.


organism_name: Nevskia ramosa


organism_name: Turneriella sp.


organism_name: Tagaea sp.


organism_name: Pedobacter sp.


organism_name: Variovorax sp.


organism_name: Klebsiella pneumoniae


organism_name: Sediminibacterium sp.


organism_name: Sphingobacteriaceae bacterium


organism_name: Rhodoglobus sp.


organism_name: Runella sp.


organism_name: Rhodospirillaceae bacterium


organism_name: Steroidobacteraceae bacterium


organism_name: Mucisphaera sp.


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Nordella sp.


organism_name: Opitutaceae bacterium


organism_name: Stagnimonas sp.


organism_name: Mycobacteriaceae bacterium


organism_name: Sphingopyxis sp.


organism_name: Mycobacterium sp.


asm_submitter: Friedrich-Loeffler-Institut

organism_name: Mycobacterium avium subsp. silvaticum


asm_submitter: Sultan Qaboos University

excluded_from_refseq: unverified source organism; genome length too large

organism_name: Tenacibaculum mesophilum


organism_name: Citrobacter freundii


organism_name: Klebsiella pneumoniae


asm_submitter: ANSES

organism_name: Escherichia coli


asm_submitter: BIOLOGY CENTRE CAS, INSTITUTE OF HYDROBIOLOGY

organism_name: Candidatus Methylopumilus planktonicus


annotation_name: Annotation submitted by Hopital Henri Mondor APHP

annotation_provider: Hopital Henri Mondor APHP

asm_submitter: Hopital Henri Mondor APHP


organism_name: Citrobacter werkmanii


organism_name: Enterobacter hormaechei


asm_submitter: IHU - Mediterranee Infection

organism_name: Proteus sp. Marseille-Q3619


excluded_from_refseq: contaminated; RefSeq annotation failed


organism_name: Nocardia sp. Marseille-Q1738


organism_name: Acinetobacter baumannii


asm_submitter: Hologenomix

excluded_from_refseq: contaminated; genome length too large

organism_name: Lacticaseibacillus rhamnosus


excluded_from_refseq: genome length too large


organism_name: Enterococcus lactis


excluded_from_refseq: annotation fails completeness check; many frameshifted proteins


excluded_from_refseq: unverified source organism; genome length too small


annotation_name: Annotation submitted by Radboud University Nijmegen

annotation_provider: Radboud University Nijmegen

asm_name: msinus

asm_submitter: Radboud University Nijmegen

isolate: mcapsa

organism_name: Methylocapsa aurea


asm_submitter: Southern Federal University

organism_name: Nitrosomonas communis


organism_name: uncultured bacterium


organism_name: Oceanibaculum nanhaiense


organism_name: Azospirillum cavernae


organism_name: Kordia sp.


organism_name: Limisphaerales bacterium


organism_name: Marinobacter adhaerens


organism_name: Caulobacteraceae bacterium


organism_name: Vreelandella titanicae


organism_name: uncultured Parvibaculaceae bacterium


organism_name: Sphingobacteriaceae bacterium


organism_name: Sediminibacterium sp.


organism_name: Beijerinckiaceae bacterium


excluded_from_refseq: RefSeq annotation failed; annotation fails MAG completeness check; derived from metagenome

organism_name: uncultured Methylophaga sp.


organism_name: Rhodopirellula europaea


organism_name: Litorimonas cladophorae


organism_name: Parasphingorhabdus sp.


organism_name: Phycisphaerales bacterium UBA1924


organism_name: Sphingomonadaceae bacterium


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome; many frameshifted proteins

organism_name: Marivita sp.


organism_name: uncultured Burkholderiaceae bacterium


organism_name: Aquidulcibacter sp.


organism_name: Allorhizobium sp.


organism_name: uncultured Elusimicrobia bacterium


organism_name: Providencia rettgeri


organism_name: Xanthobacteraceae bacterium


organism_name: Hydrogenophaga sp.


organism_name: Burkholderiaceae bacterium


organism_name: Marinoscillum luteum


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; many frameshifted proteins

organism_name: Ensifer sp.


organism_name: Emticicia sp.


organism_name: Sediminibacterium sp.


organism_name: Rheinheimera sp.


organism_name: Shewanellaceae bacterium


organism_name: Flagellimonas sediminis


organism_name: Erythrobacter sanguineus


organism_name: Methylophilus sp.


organism_name: Caulobacteraceae bacterium


organism_name: Parahoeflea alexandrii


organism_name: uncultured Solibacteraceae bacterium


organism_name: Reyranella sp.


organism_name: Limosilactobacillus reuteri


organism_name: Devosiaceae bacterium


organism_name: Blastomonas fulva


organism_name: Phreatobacter sp.


organism_name: Parahoeflea phototrophica


organism_name: Pseudohongiellaceae bacterium


organism_name: Burkholderiaceae bacterium


organism_name: Shinella sp.


organism_name: Rhodophyticola sp.


excluded_from_refseq: contaminated; unverified source organism; derived from metagenome; genome length too small


organism_name: Parvibaculum sp.


organism_name: uncultured Rhodospirillales bacterium


excluded_from_refseq: abnormal gene to sequence ratio; annotation fails MAG completeness check; derived from metagenome

organism_name: Porticoccus sp.


organism_name: Rhizobiaceae bacterium


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Vibrio harveyi


organism_name: Penaeicola halotolerans


excluded_from_refseq: derived from metagenome

organism_name: Ferrovibrio sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Caulobacteraceae bacterium


organism_name: uncultured Burkholderiaceae bacterium


organism_name: Tabrizicola sp.


organism_name: Oceanicaulis sp.


organism_name: Phenylobacterium sp.


organism_name: Phragmitibacter sp.


organism_name: Limisphaerales bacterium


organism_name: Balneola sp.


organism_name: Beijerinckiaceae bacterium


organism_name: Methylibium petroleiphilum


organism_name: uncultured Paracoccaceae bacterium


organism_name: Crocinitomicaceae bacterium


organism_name: Sphingobacteriaceae bacterium


organism_name: Parasphingorhabdus sp.


organism_name: Hyphomonas sp.


organism_name: Maribacter litoralis


organism_name: Burkholderiaceae bacterium


organism_name: Pseudomonadaceae bacterium


organism_name: Flavobacterium sp.


organism_name: Hydrogenophaga sp.


organism_name: Caulobacteraceae bacterium


organism_name: Fulvivirga sp.


organism_name: Vicingaceae bacterium


organism_name: Thalassospira lucentensis


organism_name: Winogradskyella ouciana


organism_name: Cyclobacteriaceae bacterium


organism_name: Methyloversatilis sp.


organism_name: Sphingomonadaceae bacterium


organism_name: uncultured Bacteroidia bacterium


excluded_from_refseq: unverified source organism; annotation fails MAG completeness check; derived from metagenome

organism_name: Oceanicaulis sp.


organism_name: Sphingorhabdus contaminans


organism_name: Fluviicola sp.


organism_name: Klebsiella pneumoniae


organism_name: Acinetobacter baumannii


annotation_name: Annotation submitted by VRIJE UNIVERSITEIT BRUSSEL

annotation_provider: VRIJE UNIVERSITEIT BRUSSEL

asm_submitter: VRIJE UNIVERSITEIT BRUSSEL

infraspecific_name: strain=VUB-H032 M23

isolate: LD VUB-H032 M23

organism_name: Lentilactobacillus diolivorans


asm_submitter: Liverpool School of Tropical Medicine

organism_name: Enterobacter hormaechei


organism_name: Escherichia coli


excluded_from_refseq: unverified source organism

organism_name: Citrobacter freundii


asm_submitter: Comenius University Science Park

excluded_from_refseq: from large multi-isolate project


organism_name: Salmonella enterica


excluded_from_refseq: RefSeq annotation failed

organism_name: Proteus mirabilis


organism_name: Citrobacter braakii


excluded_from_refseq: contaminated


organism_name: Klebsiella variicola


organism_name: Enterobacter kobei


organism_name: Citrobacter portucalensis


excluded_from_refseq: contaminated; genome length too large


organism_name: Staphylococcus epidermidis


organism_name: uncultured bacterium


organism_name: Enterobacter ludwigii


organism_name: Lactiplantibacillus plantarum


organism_name: Leuconostoc pseudomesenteroides


organism_name: Propionibacterium freudenreichii


organism_name: Pediococcus parvulus


infraspecific_name: strain=VUB-H028 M3

organism_name: Pediococcus inopinatus


organism_name: Companilactobacillus paralimentarius


infraspecific_name: strain=VUB-B018 D7

organism_name: Acetobacter pasteurianus


infraspecific_name: strain=VUB-H044 M1


infraspecific_name: strain=VUB-H025 M21

organism_name: Levilactobacillus brevis


organism_name: Limosilactobacillus fermentum


organism_name: Furfurilactobacillus milii


infraspecific_name: strain=VUB-H028 M10

organism_name: Levilactobacillus cerevisiae


organism_name: Lacticaseibacillus paracasei


organism_name: Fructilactobacillus sanfranciscensis


infraspecific_name: strain=VUB-H036 M3


infraspecific_name: strain=VUB-H014 D2

organism_name: Acetobacter oryzifermentans


asm_name: ACVUBB007A11 assembly

infraspecific_name: strain=VUB-B007 A11

organism_name: Acetobacter cerevisiae


infraspecific_name: strain=VUB-H051 M3


infraspecific_name: strain=VUB-H056 E3

organism_name: Acetobacter orientalis


infraspecific_name: strain=VUB-H002 M9


isolate: LP HF-IBB-392

organism_name: Limosilactobacillus panis


organism_name: Lactiplantibacillus plantarum


organism_name: Lactiplantibacillus argentoratensis


organism_name: Leuconostoc citreum KM20


infraspecific_name: strain=VUB-H036 M5

organism_name: Companilactobacillus nantensis


infraspecific_name: strain=VUB-B043 E5M


infraspecific_name: strain=VUB-H039 E5


infraspecific_name: strain=VUB-H046 M4


infraspecific_name: strain=VUB-H016 D1

organism_name: Gluconobacter potus


infraspecific_name: strain=VUB-B008 M14


isolate: PP HF-IBB-737

organism_name: Pediococcus pentosaceus


organism_name: Pediococcus acidilactici


isolate: WC BRL2

organism_name: Weissella confusa


organism_name: Levilactobacillus brevis


organism_name: Latilactobacillus sakei


infraspecific_name: strain=VUB-H015 M7

organism_name: Pediococcus parvulus


organism_name: Leuconostoc mesenteroides


infraspecific_name: strain=VUB-B006 M9


organism_name: Lacticaseibacillus paracasei


organism_name: Propionibacterium freudenreichii


organism_name: Lactococcus cremoris


organism_name: Limosilactobacillus fermentum


infraspecific_name: strain=VUB-B018 M6

organism_name: Furfurilactobacillus rossiae


infraspecific_name: strain=VUB-H042 M19


infraspecific_name: strain=VUB-H037 M3


organism_name: Lactiplantibacillus plantarum


organism_name: Streptococcus dysgalactiae


annotation_name: Annotation submitted by IINFACTS

annotation_provider: IINFACTS

asm_submitter: IINFACTS

organism_name: Pseudomonas sp. PM2


annotation_name: Annotation submitted by TOXRUN-UCIBIO

annotation_provider: TOXRUN-UCIBIO

asm_submitter: TOXRUN-UCIBIO

isolate: Pseudomonas sp. P14-2025

organism_name: Pseudomonas sp. P14-2025


organism_name: Pseudomonas sp. P15-2025


annotation_name: Annotation submitted by University of St Andrews

annotation_provider: University of St Andrews

asm_submitter: University of St Andrews

organism_name: Mycobacterium sp. smrl_JER01


asm_submitter: University of Queensland

excluded_from_refseq: derived from metagenome; from large multi-isolate project; genus undefined

organism_name: Clostridia bacterium


organism_name: Desulfovibrio sp.


organism_name: Christensenellales bacterium


organism_name: Burkholderiaceae bacterium


organism_name: Akkermansia sp.


organism_name: Brotaphodocola sp.


organism_name: Lachnospiraceae bacterium


organism_name: Butyricicoccaceae bacterium


organism_name: Faecalibacterium sp.


organism_name: Escherichia sp.


organism_name: Oscillospiraceae bacterium


organism_name: Bacteroides uniformis


organism_name: Muribaculaceae bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Bacteroides sp.


organism_name: Marinilabiliaceae bacterium


organism_name: Phascolarctobacterium faecium


organism_name: Acutalibacteraceae bacterium


excluded_from_refseq: contaminated; derived from metagenome; genus undefined

organism_name: Bacilli bacterium


organism_name: Coprococcus sp.


organism_name: Streptococcus gallolyticus


excluded_from_refseq: derived from metagenome; from large multi-isolate project

organism_name: Faecousia sp.


organism_name: Patescibacteria group bacterium


organism_name: Clostridia bacterium


organism_name: Alloprevotella sp.


organism_name: Acidaminococcaceae bacterium


organism_name: Alistipes sp.


organism_name: Lachnospiraceae bacterium


organism_name: Escherichia sp.


organism_name: Oscillospiraceae bacterium


organism_name: Akkermansia sp.


organism_name: Bacteroides thetaiotaomicron


organism_name: Prevotella sp.


organism_name: Desulfovibrio sp.


organism_name: Comamonas sp.


organism_name: Bacteroides sp.


organism_name: Bifidobacterium merycicum


excluded_from_refseq: annotation fails completeness check; derived from metagenome


organism_name: Succinivibrio sp.


organism_name: Coprococcus sp.


organism_name: Roseburia sp.


organism_name: Lachnospirales bacterium


organism_name: Marinilabiliaceae bacterium


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome


organism_name: Bacteroidales bacterium


organism_name: Acutalibacteraceae bacterium


organism_name: Bacteroidaceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Christensenellales bacterium


organism_name: Opitutales bacterium


organism_name: Akkermansia sp.


organism_name: Prevotella sp.


organism_name: Bacilli bacterium


organism_name: Clostridia bacterium


organism_name: Erysipelotrichaceae bacterium


organism_name: Vescimonas sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Bacteroides sp.


organism_name: Oscillospiraceae bacterium


organism_name: Paludibacteraceae bacterium


organism_name: Agathobacter sp.


organism_name: Aristaeellaceae bacterium


organism_name: Hominicoprocola sp.


organism_name: Phascolarctobacterium faecium


organism_name: Suilimivivens sp.