asm_submitter: ETH ZURICH

assembly_level: Contig

assembly_type: haploid

excluded_from_refseq: derived from metagenome; genus undefined

genome_rep: Full

group: bacteria

organism_name: Rhodobiaceae bacterium

release_type: Major

version_status: latest


assembly_level: Scaffold

excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Chloroflexota bacterium


organism_name: Opitutaceae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Cellvibrionales bacterium


excluded_from_refseq: derived from metagenome

organism_name: Parendozoicomonas sp.


organism_name: Arenicellales bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Pseudothioglobus singularis (SeqCode)


organism_name: Flavobacteriaceae bacterium


group: archaea

organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Pseudoalteromonas sp.


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Halieaceae bacterium


organism_name: Marinoscillum sp.


organism_name: Flavobacteriales bacterium


organism_name: Hyphomicrobiales bacterium


organism_name: Chromatiales bacterium


organism_name: Lutibacter sp.


organism_name: Myxococcota bacterium


organism_name: Oceanospirillaceae bacterium


organism_name: Pseudomonadales bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Amylibacter sp.


organism_name: Chloroflexota bacterium


organism_name: Candidatus Poribacteria bacterium


organism_name: Gemmatimonadota bacterium


organism_name: Paracoccaceae bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Luminiphilus sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Opitutales bacterium


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Flavobacteriales bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Candidatus Actinomarina sp.


organism_name: Alteromonadaceae bacterium


organism_name: Rhodospirillaceae bacterium


organism_name: Roseobacter sp.


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Sulfitobacter pontiacus


organism_name: Bacteroidota bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Cyclobacteriaceae bacterium


organism_name: Geminicoccus sp.


organism_name: Binatia bacterium (SeqCode)


organism_name: Verrucomicrobiota bacterium


organism_name: Phaeobacter sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Spirochaetia bacterium


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Cytophagales bacterium


organism_name: Endozoicomonas sp.


organism_name: Crocinitomicaceae bacterium


organism_name: Rhodobacterales bacterium


organism_name: Paracoccaceae bacterium


organism_name: Verrucomicrobiales bacterium


organism_name: Flavobacteriaceae bacterium


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Halomonas sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Opitutia bacterium


organism_name: Bacteroidota bacterium


organism_name: Alteromonadaceae bacterium


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Qipengyuania flava

paired_asm_comp: identical


organism_name: Parvibaculaceae bacterium


organism_name: Phycisphaerales bacterium


organism_name: Flavobacteriales bacterium


organism_name: Hyphomonas sp.


organism_name: uncultured bacterium


organism_name: Roseibacillus sp.


organism_name: Emcibacteraceae bacterium


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Rhodobiaceae bacterium


organism_name: Pseudomonadota bacterium


organism_name: Porticoccaceae bacterium


organism_name: Candidatus Actinomarina sp.


organism_name: Verrucomicrobiia bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Akkermansiaceae bacterium


organism_name: Opitutales bacterium


organism_name: Nitrosomonadales bacterium


organism_name: Bacteroidota bacterium


organism_name: Thalassolituus sp.


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Flavobacteriales bacterium


organism_name: uncultured archaeon


organism_name: Planctomycetaceae bacterium


organism_name: Ectothiorhodospiraceae bacterium


organism_name: Paracoccaceae bacterium


organism_name: Halieaceae bacterium


organism_name: Marinoscillum sp.


organism_name: Candidatus Actinomarina sp.


organism_name: Pseudomonadota bacterium


organism_name: Candidatus Latescibacterota bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Roseibacillus sp.


organism_name: Stappia sp.


organism_name: Alteromonas macleodii


organism_name: Roseovarius sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Phaeobacter sp.


organism_name: Halobacteriovorax sp.


organism_name: Porticoccaceae bacterium


organism_name: Phycisphaera sp.


organism_name: Burkholderiaceae bacterium


organism_name: Synechococcus sp.


organism_name: Phycisphaerae bacterium


organism_name: Rhodospirillales bacterium


organism_name: Candidatus Thioglobus sp.


organism_name: Pseudomonadales bacterium


organism_name: Cellvibrionales bacterium


organism_name: Paracoccaceae bacterium


organism_name: Abyssibacter profundi


organism_name: Hyphomonas sp.


organism_name: Bacteroidota bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Balneola sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Planctomycetaceae bacterium


organism_name: uncultured bacterium


organism_name: Alteromonas sp.


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Pseudomonadota bacterium


organism_name: Rhodobiaceae bacterium


organism_name: Balneolaceae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: uncultured archaeon


organism_name: Flavobacteriales bacterium


organism_name: Candidatus Actinomarina sp.


organism_name: Synechococcus sp.


organism_name: Bacteroidota bacterium


organism_name: Cytophagales bacterium


organism_name: Porticoccaceae bacterium


organism_name: Marinobacter sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Halobacteriovorax sp.


organism_name: Paracoccaceae bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Opitutia bacterium


organism_name: Acidobacteriota bacterium


organism_name: Pseudomonadota bacterium


organism_name: Halieaceae bacterium


organism_name: Planctomycetaceae bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Henriciella mobilis


organism_name: uncultured bacterium


organism_name: Candidatus Poribacteria bacterium


organism_name: Flavobacteriales bacterium


organism_name: Ekhidna sp.


organism_name: uncultured archaeon


organism_name: Candidatus Arcticimaribacter sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Pseudomonadales bacterium


organism_name: Pseudoalteromonas sp.


organism_name: Flavobacteriaceae bacterium


organism_name: Actinomycetota bacterium


organism_name: Bacteroidota bacterium


organism_name: Candidatus Actinomarina sp.


organism_name: Pseudooceanicola sp.


organism_name: Halomonas sp.


organism_name: Synechococcus sp.


organism_name: Thiothrix sp.


organism_name: uncultured bacterium


organism_name: Halobacteriovorax sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Roseibacillus sp.


organism_name: Flavobacteriales bacterium


organism_name: Acidimicrobiaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: uncultured archaeon


organism_name: Amylibacter sp.


organism_name: Flavobacteriaceae bacterium


organism_name: Paracoccaceae bacterium


organism_name: Bacteroidota bacterium


organism_name: Opitutia bacterium


organism_name: Candidatus Poribacteria bacterium


organism_name: Pseudomonadota bacterium


organism_name: Synechococcus sp.


organism_name: uncultured Candidatus Poseidoniales archaeon


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Alteromonas macleodii


organism_name: Endozoicomonas sp.


organism_name: Halieaceae bacterium


organism_name: Flavobacteriales bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Candidatus Actinomarina sp.


organism_name: Acidimicrobiales bacterium


organism_name: Candidatus Atelocyanobacterium sp.


organism_name: Balneola sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Porticoccaceae bacterium


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Thiothrix sp.


organism_name: Alteromonas australica


organism_name: Paracoccaceae bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; genome length too small


organism_name: Crocinitomicaceae bacterium


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Verrucomicrobiota bacterium


organism_name: Chloroflexota bacterium


organism_name: Acidimicrobiaceae bacterium


organism_name: Maricaulis sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Verrucomicrobiales bacterium


organism_name: Marisediminitalea sp.


organism_name: Puniceicoccaceae bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Alcanivorax profundi


organism_name: uncultured bacterium


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Halieaceae bacterium


organism_name: Bacteroidota bacterium


organism_name: Cryomorphaceae bacterium


organism_name: Thiothrix sp.


organism_name: Flavobacteriales bacterium


organism_name: Rhodopirellula sp.


organism_name: Paracoccaceae bacterium


organism_name: Chloroflexota bacterium


organism_name: Marinobacter sp.


organism_name: Candidatus Midichloriaceae bacterium


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Pseudomonas sp.


organism_name: Actinomycetota bacterium


organism_name: Candidatus Actinomarina sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Hyphomonadaceae bacterium


organism_name: uncultured bacterium


organism_name: Qipengyuania flava


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Thiotrichaceae bacterium


organism_name: Psychrobacter sp.


organism_name: Pseudomonadota bacterium


organism_name: Rhodopirellula sp.


organism_name: Flavobacteriaceae bacterium


organism_name: Allomuricauda sp.


organism_name: Roseibacillus sp.


organism_name: Spirochaetaceae bacterium


organism_name: Akkermansiaceae bacterium


organism_name: Desulfobacula sp.


organism_name: Verrucomicrobiota bacterium


organism_name: Endozoicomonas sp.


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Gammaproteobacteria bacterium


organism_name: uncultured bacterium


organism_name: Maricaulis sp.


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: uncultured archaeon


organism_name: Myxococcota bacterium


organism_name: Microthrixaceae bacterium


organism_name: Phycisphaera sp.


organism_name: Saprospirales bacterium


organism_name: Cytophagales bacterium


organism_name: Marisediminitalea sp.


organism_name: Bacteroidota bacterium


organism_name: Paracoccaceae bacterium


organism_name: Flavobacteriales bacterium


organism_name: Marinobacter salsuginis


organism_name: Pseudomonadota bacterium


organism_name: Verrucomicrobiales bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Rhodobiaceae bacterium


organism_name: uncultured bacterium


organism_name: uncultured Candidatus Nitrosopelagicus sp.


organism_name: Nitrosomonadales bacterium


organism_name: Thiothrix sp.


organism_name: Marinoscillum sp.


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Opitutia bacterium


organism_name: Geminicoccus sp.


organism_name: Thiotrichaceae bacterium


organism_name: Halieaceae bacterium


organism_name: uncultured Thermoplasmata archaeon


organism_name: Bacteroidota bacterium


organism_name: Myxococcota bacterium


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Alteromonadaceae bacterium


organism_name: Synechococcus sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Chloroflexota bacterium


organism_name: Maricaulis sp.


organism_name: Acidimicrobiaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Crocinitomicaceae bacterium


organism_name: Paracoccaceae bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Minwuia sp.


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Opitutia bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Rhodobiaceae bacterium


organism_name: Bacteroidota bacterium


organism_name: Cryomorphaceae bacterium


organism_name: Verrucomicrobiales bacterium


organism_name: Actinomycetota bacterium


organism_name: Oceanospirillales bacterium


organism_name: Candidatus Actinomarina sp.


organism_name: Synechococcus sp.


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Flavobacteriales bacterium


organism_name: Ectothiorhodospiraceae bacterium


organism_name: Thiothrix sp.


organism_name: Gammaproteobacteria bacterium


organism_name: uncultured bacterium


organism_name: Pseudomonadota bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Porticoccaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Acidimicrobiaceae bacterium


organism_name: Opitutia bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Opitutales bacterium


organism_name: Limibaculum sp.


organism_name: Candidatus Latescibacterota bacterium


organism_name: Paracoccaceae bacterium


organism_name: Halieaceae bacterium


organism_name: Pseudomonadales bacterium


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Flavobacteriales bacterium


organism_name: Bryobacterales bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Cyanobium sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Cellvibrionales bacterium


organism_name: Cryomorphaceae bacterium


organism_name: Candidatus Palauibacter sp.


organism_name: Myxococcota bacterium


organism_name: Halobacteriovoraceae bacterium


organism_name: Pseudothioglobus singularis (SeqCode)


organism_name: Flavobacteriia bacterium


organism_name: Candidatus Thioglobus sp.


organism_name: Marinobacter sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Planctomycetaceae bacterium


organism_name: Candidatus Actinomarina sp.


organism_name: Flavobacteriales bacterium


organism_name: Marinoscillum sp.


organism_name: Bacteroidota bacterium


organism_name: Acidimicrobiales bacterium


organism_name: Polaribacter sp.


organism_name: Halieaceae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Pseudomonadota bacterium


organism_name: uncultured archaeon


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Spirochaetia bacterium


organism_name: Paracoccaceae bacterium


organism_name: Opitutia bacterium


organism_name: Oceanicaulis sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Actinomycetota bacterium


organism_name: Winogradskyella sp.


organism_name: uncultured bacterium


organism_name: uncultured Nitrososphaerota archaeon


organism_name: Candidatus Poribacteria bacterium


organism_name: Candidatus Tethybacterales bacterium


organism_name: Myxococcota bacterium


organism_name: Allomuricauda sp.


organism_name: Synechococcus sp.


organism_name: Pseudomonadota bacterium


organism_name: Lentisphaeraceae bacterium


organism_name: Bacteroidota bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Halieaceae bacterium


organism_name: Paracoccaceae bacterium


organism_name: Hoeflea sp.


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Halomonas sp.


organism_name: Alphaproteobacteria bacterium


organism_name: uncultured bacterium


organism_name: Candidatus Actinomarina sp.


organism_name: Hyphomicrobium sp.


organism_name: Dehalococcoidia bacterium


organism_name: Rubripirellula sp.


organism_name: Flavobacteriales bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Caldilineaceae bacterium


organism_name: Thermodesulfobacteriota bacterium


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Gammaproteobacteria bacterium


organism_name: Alteromonadaceae bacterium


organism_name: Marinoscillum sp.


organism_name: Candidatus Arcticimaribacter sp.


organism_name: Maricaulis sp.


organism_name: Bacteroidota bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Halieaceae bacterium


organism_name: Rickettsiales bacterium


organism_name: Pseudomonadota bacterium


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Endozoicomonas sp.


organism_name: Candidatus Actinomarina sp.


organism_name: Chloroflexota bacterium


organism_name: Crocinitomicaceae bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Flavobacteriales bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Acidimicrobiales bacterium


organism_name: Myxococcota bacterium


organism_name: Acidimicrobiaceae bacterium


organism_name: Marinobacter salsuginis


organism_name: Flavobacteriaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: uncultured bacterium


organism_name: Halieaceae bacterium


organism_name: Synechococcus sp.


organism_name: Bacteroidota bacterium


organism_name: Paracoccaceae bacterium


organism_name: Marinoscillum sp.


organism_name: Microthrixaceae bacterium


organism_name: Roseibacillus sp.


organism_name: Dehalococcoidia bacterium


organism_name: Pseudomonadota bacterium


organism_name: Candidatus Actinomarina sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Cognatiyoonia sp.


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Puniceicoccaceae bacterium


organism_name: Myxococcota bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Acidimicrobiales bacterium


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Roseitalea sp.


organism_name: Hyphomicrobiales bacterium


organism_name: Synechococcus sp.


organism_name: Alteromonadaceae bacterium


organism_name: Bacteroidota bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Qipengyuania flava


organism_name: Verrucomicrobiales bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Alcanivorax profundi


organism_name: Paracoccaceae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Flavobacteriales bacterium


organism_name: Gemmatimonadota bacterium


organism_name: Spirochaetales bacterium


organism_name: Endozoicomonas sp.


organism_name: Kiloniella sp.


organism_name: Dehalococcoidia bacterium


organism_name: Hoeflea sp.


organism_name: Acidimicrobiales bacterium


organism_name: Candidatus Heimdallarchaeota archaeon


organism_name: Thiotrichales bacterium


organism_name: Spirochaetaceae bacterium


organism_name: Amylibacter sp.


organism_name: Bacteroidota bacterium


organism_name: Chromatiales bacterium


organism_name: Maledivibacter sp.


organism_name: uncultured Nitrosopumilaceae archaeon


organism_name: Gammaproteobacteria bacterium


organism_name: Pseudoalteromonas sp.


organism_name: Flavobacteriia bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Verrucomicrobiia bacterium


organism_name: Flavobacteriales bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Pseudomonadales bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Bacteroidia bacterium


organism_name: Halieaceae bacterium


organism_name: Acidimicrobiales bacterium


organism_name: Pseudomonadota bacterium


organism_name: Paraglaciecola sp.


organism_name: Chloroflexota bacterium


organism_name: Cellvibrionales bacterium


organism_name: Candidatus Thioglobus sp.


organism_name: Spirochaetaceae bacterium


organism_name: Gemmatimonadota bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Cytophagales bacterium


organism_name: Woeseiaceae bacterium


organism_name: Flavobacteriales bacterium


organism_name: Planctomycetaceae bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Allomuricauda sp.


organism_name: Flavobacteriaceae bacterium


organism_name: Halieaceae bacterium


organism_name: Roseitalea sp.


organism_name: Spirochaeta sp.


organism_name: Spirochaetales bacterium


organism_name: Candidatus Nanopelagicales bacterium


organism_name: Cognaticolwellia aestuarii


organism_name: Candidatus Poribacteria bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Caldilineaceae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Rhodovibrionaceae bacterium


organism_name: Pseudomonadota bacterium


organism_name: Porticoccaceae bacterium


organism_name: Myxococcota bacterium


organism_name: Rhodospirillales bacterium


organism_name: Woeseiaceae bacterium


organism_name: Verrucomicrobiales bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Maricaulis sp.


organism_name: Actinomycetota bacterium


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Halieaceae bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: uncultured bacterium


organism_name: Oceanospirillaceae bacterium


organism_name: Oleispira sp.


organism_name: Thalassolituus sp.


organism_name: Flavobacteriales bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: uncultured archaeon


organism_name: Gammaproteobacteria bacterium


organism_name: Abyssibacter profundi


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Synechococcus sp.


organism_name: Bacteroidota bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Candidatus Actinomarina sp.


organism_name: Dehalococcoidia bacterium


organism_name: Thiotrichaceae bacterium


organism_name: Erythrobacter sp.


organism_name: Allomuricauda sp.


organism_name: Verrucomicrobiota bacterium


organism_name: uncultured bacterium


organism_name: Paracoccaceae bacterium


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Porticoccaceae bacterium


organism_name: Halieaceae bacterium


organism_name: Acidimicrobiales bacterium


organism_name: Cryomorphaceae bacterium


organism_name: Actinomycetes bacterium


organism_name: Crocinitomicaceae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Alcanivorax profundi


organism_name: Pseudomonadota bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Candidatus Actinomarinales bacterium


organism_name: uncultured archaeon


organism_name: Verrucomicrobiales bacterium


organism_name: Candidatus Actinomarina sp.


organism_name: Synechococcus sp.


organism_name: Myxococcota bacterium


organism_name: Candidatus Poribacteria bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Acidobacteriota bacterium


organism_name: Inquilinus sp.


organism_name: Rhodobiaceae bacterium


organism_name: uncultured Nitrosopumilaceae archaeon


organism_name: Flavobacteriales bacterium


organism_name: Bacteroidota bacterium


organism_name: Opitutales bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Pseudomonadales bacterium


organism_name: Desulfurellaceae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Cyanobacteriota bacterium


organism_name: Marinoscillum sp.


organism_name: Acidimicrobiales bacterium


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: uncultured bacterium


organism_name: Planctomycetaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Hyphomonas sp.


organism_name: Alteromonas macleodii


organism_name: Flavobacteriaceae bacterium


organism_name: Flavobacteriia bacterium


organism_name: Paracoccaceae bacterium


organism_name: Candidatus Actinomarinales bacterium


organism_name: Roseibacillus sp.


organism_name: Verrucomicrobiia bacterium


organism_name: Pseudoalteromonas sp.


organism_name: Candidatus Actinomarina sp.


organism_name: Dehalococcoidia bacterium


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Gammaproteobacteria bacterium


organism_name: Methylophilaceae bacterium


organism_name: Oceanospirillales bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Pseudomonadota bacterium


organism_name: Nitrospira sp.


organism_name: Alteromonas australica


organism_name: Flammeovirgaceae bacterium


organism_name: Alteromonas sp.


organism_name: Oceanospirillaceae bacterium


organism_name: Hyphomicrobiales bacterium


organism_name: uncultured Nitrosopumilaceae archaeon


organism_name: uncultured bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Rhodospirillaceae bacterium


organism_name: Cellvibrionales bacterium


organism_name: Rhodospirillales bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Candidatus Actinomarina sp.


organism_name: Paracoccaceae bacterium


organism_name: Synechococcus sp.


organism_name: Bacteroidota bacterium


organism_name: Pseudomonadota bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Planctomycetaceae bacterium


organism_name: Planctomycetota bacterium


organism_name: Planktomarina temperata


organism_name: Chloroflexota bacterium


organism_name: Myxococcota bacterium


organism_name: uncultured bacterium


organism_name: Marisediminitalea sp.


organism_name: Thiothrix sp.


organism_name: Thalassolituus sp.


organism_name: Flavobacteriales bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Thiotrichaceae bacterium


organism_name: Opitutia bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Flammeovirgaceae bacterium


organism_name: Nitrosomonadales bacterium


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Paracoccaceae bacterium


organism_name: Rhodobacterales bacterium


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Flavobacteriaceae bacterium


organism_name: Bacteroidota bacterium


organism_name: Planctomycetota bacterium


organism_name: Pseudomonadota bacterium


organism_name: Acidimicrobiaceae bacterium


organism_name: uncultured archaeon


organism_name: Roseibacillus sp.


organism_name: uncultured bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Chloroflexota bacterium


organism_name: Marinoscillum sp.


organism_name: Thiotrichaceae bacterium


organism_name: Candidatus Actinomarina sp.


organism_name: Porticoccaceae bacterium


organism_name: Flavobacteriales bacterium


organism_name: Cyanobium sp.


organism_name: Rhodospirillales bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Synechococcus sp.


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Cytophagales bacterium


organism_name: Paracoccaceae bacterium


organism_name: Thiothrix sp.


organism_name: uncultured bacterium


organism_name: Actinomycetes bacterium


organism_name: Acidimicrobiaceae bacterium


organism_name: Mariniblastus sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Candidatus Actinomarinales bacterium


organism_name: Candidatus Poribacteria bacterium


organism_name: Pseudomonadota bacterium


organism_name: Porticoccaceae bacterium


organism_name: Bacteroidota bacterium


organism_name: Myxococcota bacterium


organism_name: uncultured archaeon


organism_name: Gammaproteobacteria bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Candidatus Actinomarina sp.


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Alteromonas sp.


organism_name: Marinobacter sp.


organism_name: Marinoscillum sp.


organism_name: Verrucomicrobiota bacterium


organism_name: Alteromonas macleodii


organism_name: Thiotrichaceae bacterium


organism_name: Flavobacteriales bacterium


organism_name: uncultured bacterium


organism_name: Synechococcus sp.


organism_name: Pseudomonadota bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Acidimicrobiaceae bacterium


organism_name: Halieaceae bacterium


organism_name: Bacteroidota bacterium


organism_name: uncultured archaeon


organism_name: Cryomorphaceae bacterium


organism_name: Rhodopirellula sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Porticoccaceae bacterium


organism_name: Alcanivorax profundi


organism_name: Endozoicomonas sp.


organism_name: Crocinitomicaceae bacterium


organism_name: Oceanospirillales bacterium


organism_name: Candidatus Actinomarina sp.


organism_name: Flavobacteriaceae bacterium


organism_name: Phycisphaera sp.


organism_name: uncultured bacterium


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Flavobacteriales bacterium


organism_name: Paracoccaceae bacterium


organism_name: Bacteroidota bacterium


organism_name: Ectothiorhodospiraceae bacterium


organism_name: Alteromonas macleodii


organism_name: Pseudomonadota bacterium


organism_name: Qipengyuania flava


organism_name: Hyphomonas sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Rubripirellula sp.


organism_name: uncultured archaeon


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Chloroflexota bacterium


organism_name: Candidatus Heimdallarchaeota archaeon


organism_name: Candidatus Actinomarina sp.


organism_name: Pseudooceanicola sp.


organism_name: Crocinitomicaceae bacterium


organism_name: Rhodopirellula sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Acidimicrobiaceae bacterium


organism_name: Gilvibacter sp.


organism_name: Bacteroidota bacterium


organism_name: Thiotrichaceae bacterium


organism_name: Candidatus Actinomarinales bacterium


organism_name: Pseudomonadales bacterium


organism_name: Paracoccaceae bacterium


organism_name: Pseudomonadota bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Rhodospirillaceae bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Halieaceae bacterium


organism_name: uncultured archaeon


organism_name: Alteromonas sp.


organism_name: uncultured bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Marisediminitalea sp.


organism_name: Endozoicomonas sp.


organism_name: Myxococcota bacterium


organism_name: Marinobacter sp.


organism_name: Acidimicrobiaceae bacterium


organism_name: Halobacteriovorax sp.


organism_name: Rhodobiaceae bacterium


organism_name: Bacteroidota bacterium


organism_name: Rhodospirillales bacterium


organism_name: Ponticaulis sp.


organism_name: Actinomycetes bacterium


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Alteromonas macleodii


organism_name: Gammaproteobacteria bacterium


organism_name: uncultured bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Synechococcus sp.


organism_name: uncultured archaeon


organism_name: Halieaceae bacterium


organism_name: Pseudooceanicola sp.


organism_name: Acidimicrobiales bacterium


organism_name: Myxococcota bacterium


organism_name: Acidimicrobiaceae bacterium


organism_name: Ilumatobacteraceae bacterium


organism_name: Lentisphaeraceae bacterium


organism_name: Paracoccaceae bacterium


organism_name: Alteromonas sp.


organism_name: Pseudomonadota bacterium


organism_name: Acinetobacter venetianus


organism_name: Alteromonadaceae bacterium


organism_name: Candidatus Actinomarina sp.


organism_name: Abyssibacter profundi


organism_name: Gemmatimonadales bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: uncultured bacterium


organism_name: Roseobacter sp.


organism_name: Synechococcus sp.


organism_name: uncultured archaeon


organism_name: Cryomorphaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Candidatus Actinomarinales bacterium


organism_name: Hyphomonadaceae bacterium


organism_name: Microthrixaceae bacterium


asm_submitter: University hospital for infectious diseases dr. fran mihaljevic

excluded_from_refseq: contaminated

isolate: Human clinical isolate

organism_name: Francisella tularensis subsp. holarctica


asm_submitter: UNIVERSITY OF NEBRASKA

excluded_from_refseq: RefSeq annotation failed; derived from metagenome

organism_name: uncultured Parolsenella sp.


organism_name: uncultured Parabacteroides sp.


organism_name: uncultured Bifidobacterium sp.


organism_name: uncultured Megasphaera sp.


organism_name: uncultured Prevotella sp.


organism_name: Candidatus Nanoperiomorbus sp.


excluded_from_refseq: RefSeq annotation failed; annotation fails MAG completeness check; derived from metagenome

organism_name: uncultured Collinsella sp.


organism_name: Candidatus Avilachnospira sp.


organism_name: uncultured Alloprevotella sp.


organism_name: uncultured Phocaeicola sp.


organism_name: uncultured Fusobacterium sp.


organism_name: Bifidobacterium callitrichos


organism_name: Fusobacterium mortiferum


organism_name: uncultured Duodenibacillus sp.


organism_name: uncultured Megamonas sp.


organism_name: Phocaeicola vulgatus


organism_name: Candidatus Scatoplasma sp.


organism_name: Candidatus Avisuccinivibrio sp.


organism_name: uncultured Sutterella sp.


organism_name: uncultured Candidatus Fimisoma sp.


organism_name: Bifidobacterium hapali


organism_name: Dialister histaminiformans


organism_name: Segatella copri


organism_name: uncultured Atopobiaceae bacterium


organism_name: Candidatus Nanoperiomorbus sp.


organism_name: uncultured Parabacteroides sp.


organism_name: uncultured Megasphaera sp.


organism_name: uncultured Phocaeicola sp.


organism_name: uncultured Alloprevotella sp.


organism_name: uncultured Collinsella sp.


organism_name: Candidatus Ventrisoma sp.


organism_name: uncultured Duodenibacillus sp.


organism_name: uncultured Coriobacteriales bacterium


organism_name: Phocaeicola plebeius


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome

organism_name: Bifidobacterium callitrichos


organism_name: uncultured Veillonellaceae bacterium


organism_name: uncultured Bifidobacterium sp.


organism_name: Fusobacterium mortiferum


organism_name: uncultured Sutterella sp.


organism_name: Phocaeicola vulgatus


organism_name: uncultured Fusobacterium sp.


organism_name: Candidatus Avilachnospira sp.


organism_name: Bacteroides ovatus


organism_name: Flavonifractor plautii


organism_name: uncultured Megamonas sp.


organism_name: uncultured Atopobiaceae bacterium


organism_name: uncultured Collinsella sp.


organism_name: Candidatus Scatoplasma sp.


organism_name: uncultured Phocaeicola sp.


organism_name: uncultured Parabacteroides sp.


organism_name: Megamonas funiformis


organism_name: Candidatus Avisuccinivibrio sp.


organism_name: uncultured Veillonellaceae bacterium


organism_name: Candidatus Nanoperiomorbus sp.


organism_name: Segatella copri


organism_name: uncultured Prevotella sp.


organism_name: uncultured Candidatus Fimisoma sp.


organism_name: Fusobacterium mortiferum


organism_name: Phocaeicola vulgatus


organism_name: uncultured Duodenibacillus sp.


organism_name: uncultured Bifidobacterium sp.


organism_name: Parabacteroides merdae


organism_name: uncultured Megasphaera sp.


organism_name: uncultured Collinsella sp.


organism_name: Candidatus Avilachnospira sp.


organism_name: uncultured Megamonas sp.


organism_name: uncultured Atopobiaceae bacterium


organism_name: uncultured Parabacteroides sp.


organism_name: Candidatus Avisuccinivibrio sp.


organism_name: Candidatus Scatoplasma sp.


organism_name: Paraprevotella clara


organism_name: uncultured Phocaeicola sp.


organism_name: uncultured Veillonellaceae bacterium


organism_name: Segatella copri


organism_name: uncultured Brotaphodocola sp.


organism_name: uncultured Sutterella sp.


organism_name: Bifidobacterium callitrichos


organism_name: Bacteroides ovatus


organism_name: Bacteroides salyersiae


organism_name: uncultured Duodenibacillus sp.


organism_name: uncultured Megasphaera sp.


organism_name: uncultured Alloprevotella sp.


organism_name: Candidatus Avilachnospira sp.


organism_name: uncultured Megamonas sp.


organism_name: Candidatus Ventrisoma sp.


organism_name: uncultured Fusobacterium sp.


organism_name: Bacteroides uniformis


organism_name: uncultured Bifidobacterium sp.


organism_name: Phocaeicola vulgatus


organism_name: uncultured Blautia sp.


organism_name: uncultured Succinatimonas sp.


organism_name: Candidatus Nanoperiomorbus sp.


organism_name: uncultured Eggerthellaceae bacterium


organism_name: Fusobacterium mortiferum


organism_name: uncultured Parabacteroides sp.


organism_name: uncultured Candidatus Fimisoma sp.


organism_name: Candidatus Avisuccinivibrio sp.


organism_name: uncultured Veillonellaceae bacterium


organism_name: uncultured Alloprevotella sp.


organism_name: uncultured Prevotella sp.


organism_name: uncultured Ellagibacter sp.


organism_name: uncultured Collinsella sp.


organism_name: Candidatus Ventrisoma sp.


organism_name: uncultured Megamonas sp.


organism_name: uncultured Brotaphodocola sp.


organism_name: uncultured Bifidobacterium sp.


organism_name: uncultured Enterocloster sp.


organism_name: Candidatus Avilachnospira sp.


organism_name: uncultured Phocaeicola sp.


organism_name: Phocaeicola plebeius


organism_name: Bifidobacterium aesculapii


organism_name: uncultured Coprobacter sp.


organism_name: Bifidobacterium callitrichos


organism_name: uncultured Parabacteroides sp.


organism_name: uncultured Fusobacterium sp.


organism_name: Candidatus Avisuccinivibrio sp.


organism_name: uncultured Candidatus Fimisoma sp.


organism_name: uncultured Alloprevotella sp.


organism_name: Bacteroides salyersiae


organism_name: uncultured Sutterella sp.


organism_name: Phocaeicola vulgatus


organism_name: uncultured Thermophilibacter sp.


organism_name: Segatella copri


organism_name: uncultured Duodenibacillus sp.


organism_name: Flavonifractor plautii


organism_name: uncultured Bifidobacterium sp.


organism_name: Megamonas funiformis


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Megasphaera sp.


organism_name: uncultured Megamonas sp.


organism_name: Dialister histaminiformans


organism_name: Candidatus Scatoplasma sp.


organism_name: uncultured Phocaeicola sp.


organism_name: Candidatus Avisuccinivibrio sp.


organism_name: Bifidobacterium callitrichos


organism_name: uncultured Atopobiaceae bacterium


organism_name: Candidatus Ventrisoma sp.


organism_name: uncultured Alloprevotella sp.


organism_name: uncultured Veillonellaceae bacterium


organism_name: Candidatus Avilachnospira sp.


organism_name: Candidatus Nanoperiomorbus sp.


organism_name: Escherichia coli


organism_name: Bacteroides ovatus


organism_name: Segatella copri


organism_name: uncultured Fusobacterium sp.


organism_name: uncultured Candidatus Fimisoma sp.


organism_name: Paraprevotella clara


organism_name: Bifidobacterium myosotis


organism_name: uncultured Sutterella sp.


organism_name: uncultured Megasphaera sp.


organism_name: uncultured Bifidobacterium sp.


organism_name: uncultured Megamonas sp.


organism_name: uncultured Prevotella sp.


organism_name: Bifidobacterium hapali


organism_name: uncultured Collinsella sp.


organism_name: Phocaeicola massiliensis


organism_name: uncultured Parolsenella sp.


organism_name: Candidatus Avilachnospira sp.


organism_name: Bacteroides faecis


organism_name: uncultured Dorea sp.


organism_name: uncultured Atopobiaceae bacterium


organism_name: uncultured Thermophilibacter sp.


organism_name: Bacteroides uniformis


organism_name: uncultured Parabacteroides sp.


organism_name: Candidatus Scatoplasma sp.


organism_name: Bifidobacterium callitrichos


organism_name: Fusobacterium mortiferum


organism_name: uncultured Lachnospiraceae bacterium


organism_name: uncultured Brotaphodocola sp.


organism_name: uncultured Megamonas sp.


organism_name: uncultured Fusobacterium sp.


organism_name: Bacteroides ovatus


organism_name: Candidatus Ventrisoma sp.


organism_name: Segatella copri


organism_name: Candidatus Avilachnospira sp.


organism_name: uncultured Bifidobacterium sp.


organism_name: uncultured Collinsella sp.


organism_name: Phocaeicola plebeius


organism_name: uncultured Candidatus Fimisoma sp.


organism_name: uncultured Alloprevotella sp.


organism_name: uncultured Megasphaera sp.


organism_name: uncultured Prevotella sp.


organism_name: Escherichia coli


organism_name: uncultured Parabacteroides sp.


organism_name: Dialister histaminiformans


organism_name: uncultured Atopobiaceae bacterium


organism_name: uncultured Duodenibacillus sp.


organism_name: Paraprevotella clara


organism_name: uncultured Phocaeicola sp.


organism_name: uncultured Sutterella sp.


organism_name: Fusobacterium mortiferum


organism_name: Candidatus Avisuccinivibrio sp.


organism_name: uncultured Bifidobacterium sp.


organism_name: Segatella copri


organism_name: uncultured Brotaphodocola sp.


organism_name: Candidatus Avilachnospira sp.


organism_name: Bacteroides uniformis


organism_name: uncultured Candidatus Fimisoma sp.


organism_name: uncultured Megasphaera sp.


organism_name: Candidatus Scatoplasma sp.


organism_name: uncultured Thermophilibacter sp.


organism_name: uncultured Veillonellaceae bacterium


organism_name: uncultured Megamonas sp.


organism_name: uncultured Alloprevotella sp.


organism_name: Megamonas funiformis


organism_name: uncultured Sarcina sp.


organism_name: Phocaeicola vulgatus


organism_name: uncultured Parabacteroides sp.


organism_name: uncultured Fusobacterium sp.


organism_name: Bifidobacterium hapali


organism_name: uncultured Coriobacteriales bacterium


organism_name: uncultured Parolsenella sp.


organism_name: Candidatus Ventrisoma sp.


organism_name: uncultured Bifidobacterium sp.


organism_name: uncultured Phocaeicola sp.


asm_submitter: UK Health Security Agency

organism_name: Pseudomonas aeruginosa


asm_submitter: European Centre for Disease Prevention and Control

excluded_from_refseq: from large multi-isolate project

isolate: ECDC 1569

organism_name: Acinetobacter baumannii


isolate: ECDC 1565


excluded_from_refseq: unverified source organism; from large multi-isolate project

isolate: ECDC 1571


isolate: ECDC 1549


isolate: ECDC 1545


isolate: ECDC 1561


isolate: ECDC 1557


isolate: ECDC 1551


isolate: ECDC 1559


isolate: ECDC 1563


isolate: ECDC 1543


asm_submitter: University Hospital Basel

organism_name: Citrobacter freundii

relation_to_type_material: assembly from type material


organism_name: Klebsiella pneumoniae


organism_name: Enterobacter hormaechei


excluded_from_refseq: annotation fails completeness check; many frameshifted proteins


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: Alphaproteobacteria bacterium


organism_name: uncultured Nitrososphaerota archaeon


excluded_from_refseq: derived from metagenome

organism_name: Alteromonas macleodii


organism_name: Alcanivorax sp.


organism_name: Myxococcota bacterium


organism_name: Marinobacter salarius


asm_submitter: Comenius University Science Park

organism_name: Salmonella enterica


organism_name: Nitrospiraceae bacterium


organism_name: Lysobacterales bacterium


organism_name: Acidiferrobacterales bacterium


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Gammaproteobacteria bacterium


organism_name: Candidatus Methylomirabilota bacterium


organism_name: Lutibacter sp.


organism_name: uncultured Nitrosopumilaceae archaeon


organism_name: Hadarchaeota archaeon (SeqCode)


organism_name: uncultured bacterium


organism_name: Steroidobacteraceae bacterium


organism_name: Anaerolineaceae bacterium


organism_name: Oceanospirillales bacterium


organism_name: Candidatus Dadabacteria bacterium


organism_name: Pseudomonadota bacterium


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Gemmatimonadota bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Salmonella enterica


organism_name: Nitrospirales bacterium


organism_name: Ilumatobacter sp.


organism_name: Acidimicrobiia bacterium


organism_name: Candidatus Bathyarchaeota archaeon


organism_name: Acidiferrobacterales bacterium


organism_name: Rhodospirillales bacterium


organism_name: Synechococcus sp.


organism_name: Gammaproteobacteria bacterium


organism_name: uncultured Nitrosopumilales archaeon


organism_name: uncultured Nitrosopumilaceae archaeon


organism_name: Chloroflexota bacterium


organism_name: Pseudomonadota bacterium


organism_name: uncultured bacterium


organism_name: uncultured Nitrososphaerota archaeon


organism_name: Gemmatimonadota bacterium


organism_name: Candidatus Methylomirabilota bacterium


organism_name: Binatia bacterium (SeqCode)


organism_name: Alphaproteobacteria bacterium


organism_name: Fusobacterium pseudoperiodonticum


organism_name: Neisseria sp.


organism_name: Myxococcota bacterium


organism_name: Thermodesulfobacteriota bacterium


organism_name: Rothia mucilaginosa


organism_name: Candidatus Coatesiibacteriota bacterium


organism_name: uncultured archaeon


organism_name: Gammaproteobacteria bacterium


organism_name: Burkholderiales bacterium


organism_name: Ferrovibrio sp.


organism_name: Woeseiaceae bacterium


organism_name: Chloroflexota bacterium


organism_name: Cutibacterium acnes


organism_name: Pseudomonadota bacterium


organism_name: Acidobacteriota bacterium


organism_name: uncultured bacterium


organism_name: Planctomycetota bacterium


organism_name: Rhodospirillales bacterium


organism_name: Deltaproteobacteria bacterium


organism_name: Cytophagales bacterium


organism_name: Spirochaetales bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Candidatus Berkelbacteria bacterium


organism_name: Vreelandella sulfidaeris


organism_name: Candidatus Scalindua sediminis


organism_name: Thermoguttaceae bacterium


organism_name: Porticoccaceae bacterium


organism_name: uncultured archaeon


organism_name: Candidatus Parcubacteria bacterium


organism_name: Candidatus Bathyarchaeota archaeon


organism_name: Pseudomonadales bacterium


organism_name: Citrobacter freundii


organism_name: Candidatus Aminicenantota bacterium


organism_name: Dehalococcoidia bacterium


organism_name: uncultured Nitrosopumilaceae archaeon


organism_name: Salmonella enterica


organism_name: Actinomycetota bacterium


organism_name: Candidatus Actinomarina sp.


organism_name: Hadarchaeota archaeon (SeqCode)


organism_name: Chloroflexota bacterium


organism_name: uncultured Nitrososphaerota archaeon


organism_name: Pseudomonadota bacterium


organism_name: uncultured bacterium


organism_name: Magnetococcales bacterium


organism_name: Synechococcus sp.


organism_name: Actinomycetes bacterium


organism_name: Cyanobacteriota bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Ilumatobacter sp.


organism_name: uncultured archaeon


organism_name: Alphaproteobacteria bacterium


organism_name: uncultured Nitrosopumilaceae archaeon


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Alteromonas mediterranea


organism_name: Klebsiella pneumoniae


organism_name: Candidatus Bathyarchaeota archaeon


organism_name: uncultured Nitrosopumilales archaeon


organism_name: Candidatus Methylomirabilota bacterium


organism_name: Woeseiaceae bacterium


organism_name: Pseudomonadota bacterium


organism_name: Chloroflexota bacterium


organism_name: uncultured Nitrososphaerota archaeon


organism_name: Salmonella enterica


asm_submitter: Southern Federal University

isolate: PMEG

organism_name: Priestia megaterium


asm_name: PMEGBion-M

isolate: PMEGBion-M


assembly_level: Complete Genome

organism_name: Streptomyces anulatus


asm_submitter: Instituto de Microbiologia y Zoologia Agricola, Instituto Nacional de Tecnologia Agropecuaria

infraspecific_name: strain=BGSC 4I1 (=HD10)

isolate: BGSC 4I1 (=HD10)

organism_name: Bacillus thuringiensis serovar entomocidus


isolate: ECDC 1547

organism_name: Acinetobacter baumannii


isolate: ECDC 1573


isolate: ECDC 1567


isolate: ECDC 1553


isolate: ECDC 1555


organism_name: Escherichia coli


organism_name: Enterococcus faecium


organism_name: Pseudomonas aeruginosa


asm_submitter: UANTW

organism_name: Pediococcus acidilactici


organism_name: Lactobacillus crispatus


organism_name: Klebsiella quasipneumoniae


organism_name: Lacticaseibacillus paracasei


organism_name: Lactobacillus gasseri


organism_name: Limosilactobacillus reuteri


annotation_name: Annotation submitted by LM-UGent

annotation_provider: LM-UGent

asm_submitter: LM-UGent

infraspecific_name: strain=LMG 34360

organism_name: Gilliamella sp. LMG 34360


organism_name: Gilliamella apis


organism_name: Gilliamella sp. LMG 34362


organism_name: Gilliamella apicola


organism_name: Gilliamella sp. LMG 34359


infraspecific_name: strain=LMG 34361

organism_name: Gilliamella sp. LMG 34361


infraspecific_name: strain=LMG 34359


infraspecific_name: strain=LMG 34362


asm_submitter: Universite de Montreal


asm_submitter: Sun Yat-sen University Cancer Center

organism_name: Dietzia maris


organism_name: Providencia stuartii


organism_name: Proteus mirabilis


annotation_name: Annotation submitted by Max Planck Unit for the Science of Pathogens

infraspecific_name: strain=5448 substr. A749

organism_name: Streptococcus pyogenes


annotation_provider: Max Planck Unit for the Science of Pathogens

infraspecific_name: strain=5448 AP substr. A772


organism_name: Acinetobacter baumannii


asm_submitter: dtu national food institute

organism_name: Klebsiella pneumoniae


organism_name: Campylobacter jejuni


organism_name: Campylobacter coli


organism_name: Staphylococcus aureus


asm_submitter: instituto de la grasa

isolate: Lacticaseibacillus rhamnosus CH20

organism_name: Lacticaseibacillus rhamnosus


isolate: Pseudomonas sp. Q168

organism_name: Pseudomonas sp. RIT623


isolate: Pseudomonas shahriarae QA1

organism_name: Pseudomonas shahriarae


isolate: Pseudomonas paracarnis Q363

organism_name: Pseudomonas paracarnis


isolate: Lactiplantibacillus plantarum CH8

organism_name: Lactiplantibacillus plantarum


isolate: Lacticaseibacillus paracasei CH3

organism_name: Lacticaseibacillus paracasei


isolate: Pseudomonas haemolytica Q265

organism_name: Pseudomonas haemolytica


isolate: Lactiplantibacillus plantarum CH21


isolate: Pseudomonas putida C22

organism_name: Pseudomonas putida


isolate: Pseudomonas paracarnis Q467


isolate: Lacticaseibacillus rhamnosus CH17


isolate: Lacticaseibacillus paracasei CH7


isolate: ECDC 1089


isolate: ECDC 1078


isolate: ECDC 1080


isolate: ECDC 1081


isolate: ECDC 1075


isolate: ECDC 1093


isolate: ECDC 1077


isolate: ECDC 1096


isolate: ECDC 1090


isolate: ECDC 1088


isolate: ECDC 1091


isolate: ECDC 1094


isolate: ECDC 1085


isolate: ECDC 1076


isolate: ECDC 1092


isolate: ECDC 1095


isolate: ECDC 1082


isolate: ECDC 1083


isolate: ECDC 1072


isolate: ECDC 1079


isolate: ECDC 1086


annotation_name: Annotation submitted by UNIVERSITY OF LEICESTER

annotation_provider: UNIVERSITY OF LEICESTER

asm_submitter: UNIVERSITY OF LEICESTER

assembly_level: Chromosome


organism_name: Shigella sonnei


isolate: ECDC 1073


isolate: ECDC 1071


isolate: ECDC 1074


isolate: ECDC 1070


isolate: ECDC 2062


isolate: ECDC 1097


isolate: ECDC 0553


isolate: ECDC 0528


isolate: ECDC 0523


isolate: ECDC 0545


isolate: ECDC 2072


isolate: ECDC 2058


isolate: ECDC 2082


isolate: ECDC 2056


isolate: ECDC 0535


isolate: ECDC 0530


isolate: ECDC 0547


isolate: ECDC 0515


isolate: ECDC 0529


isolate: ECDC 0542


isolate: ECDC 2074


isolate: ECDC 0522


isolate: ECDC 2070


isolate: ECDC 0550


isolate: ECDC 2052


isolate: ECDC 0514


isolate: ECDC 0552


isolate: ECDC 0537


isolate: ECDC 0527


infraspecific_name: strain=type strain: 8324413

isolate: ECDC 0532


isolate: ECDC 2076


isolate: ECDC 0531


isolate: ECDC 0510


isolate: ECDC 2054


isolate: ECDC 0518


isolate: ECDC 0539


isolate: ECDC 0525


isolate: ECDC 0513


isolate: ECDC 0548


isolate: ECDC 2060


isolate: ECDC 0534


isolate: ECDC 0526


isolate: ECDC 0521


isolate: ECDC 0517


isolate: ECDC 0512


isolate: ECDC 2068


isolate: ECDC 2066


isolate: ECDC 0538


isolate: ECDC 0533


isolate: ECDC 0549


isolate: ECDC 0524


organism_name: Pseudomonas aeruginosa


organism_name: Morganella morganii


organism_name: Proteus mirabilis


organism_name: Acinetobacter baumannii


organism_name: Serratia marcescens


organism_name: Citrobacter koseri


organism_name: Citrobacter freundii


organism_name: Enterobacter hormaechei


organism_name: Enterobacter kobei


isolate: ECDC 0519


isolate: ECDC 2078


isolate: ECDC 0543


isolate: ECDC 0516


isolate: ECDC 0540


isolate: ECDC 0520


asm_submitter: national institute of biology

organism_name: Microbacterium paraoxydans

refseq_category: reference genome


organism_name: Mycobacterium tuberculosis


infraspecific_name: strain=ECDC 1516

isolate: ECDC 1516


infraspecific_name: strain=ECDC 1508

isolate: ECDC 1508


infraspecific_name: strain=ECDC 1540

isolate: ECDC 1540


infraspecific_name: strain=ECDC 1506

isolate: ECDC 1506


infraspecific_name: strain=ECDC 1520

isolate: ECDC 1520


infraspecific_name: strain=ECDC 1510

isolate: ECDC 1510


infraspecific_name: strain=ECDC 1534

isolate: ECDC 1534


infraspecific_name: strain=ECDC 1514

isolate: ECDC 1514


infraspecific_name: strain=ECDC 1536

isolate: ECDC 1536


infraspecific_name: strain=ECDC 1518

isolate: ECDC 1518


infraspecific_name: strain=ECDC 1524

isolate: ECDC 1524


infraspecific_name: strain=ECDC 1526

isolate: ECDC 1526


infraspecific_name: strain=ECDC 1542

isolate: ECDC 1542


infraspecific_name: strain=ECDC 1522

isolate: ECDC 1522


infraspecific_name: strain=ECDC 1512

isolate: ECDC 1512


isolate: ECDC 0509


isolate: ECDC 0511


isolate: ECDC 0544


organism_name: Klebsiella pneumoniae


isolate: ECDC 0546


isolate: ECDC 0551


isolate: ECDC 1216


organism_name: Salmonella enterica


organism_name: Enterococcus faecium


organism_name: Enterobacter roggenkampii


organism_name: Streptococcus pneumoniae


organism_name: Stenotrophomonas maltophilia


organism_name: Escherichia coli


organism_name: Achromobacter xylosoxidans


organism_name: Pseudomonas aeruginosa


asm_submitter: Nicolaus Copernicus University in Torun

organism_name: Thermodesulfovibrionales bacterium


organism_name: Anaerolineae bacterium


organism_name: Candidatus Sulfomarinibacter sp.


organism_name: Thermodesulfovibrionia bacterium


organism_name: Thermodesulfobacteriota bacterium


organism_name: Gemmatimonadales bacterium


organism_name: Candidatus Thorarchaeaceae archaeon


organism_name: Thermoanaerobaculia bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Candidatus Krumholzibacteriia bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Acidiferrobacterales bacterium


organism_name: Myxococcota bacterium


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Eudoraea sp.


organism_name: Vicinamibacterales bacterium


organism_name: Desulfobacteria bacterium


organism_name: Anaerolineales bacterium


organism_name: Candidatus Humimicrobiaceae bacterium


organism_name: Nitrospinaceae bacterium


organism_name: Anaerohalosphaeraceae bacterium


organism_name: Candidatus Desulfacyla sp.


organism_name: Limosilactobacillus fermentum


organism_name: Candidatus Eiseniibacteriota bacterium


organism_name: Candidatus Hodarchaeales archaeon


organism_name: Achromobacter insuavis


organism_name: Rhodospirillales bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Candidatus Acidiferrales bacterium


asm_submitter: ETH ZURICH

organism_name: Dehalococcoidia bacterium


organism_name: Ilumatobacter sp.


organism_name: uncultured Nitrosopumilales archaeon


organism_name: Gemmatimonadota bacterium


organism_name: Candidatus Wukongarchaeota archaeon


organism_name: Billgrantia desiderata


organism_name: Chloroflexota bacterium


organism_name: Acidobacteriota bacterium


organism_name: Planctomycetota bacterium


organism_name: Bacteroidota bacterium


organism_name: uncultured archaeon


organism_name: Woeseiaceae bacterium


organism_name: Pseudomonadota bacterium


organism_name: uncultured bacterium


organism_name: Alcanivorax sp.


organism_name: Planctomycetia bacterium


organism_name: Candidatus Bathyarchaeota archaeon


organism_name: Dehalococcoidales bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Prochlorococcus sp.


organism_name: Myxococcota bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Sphingomonas sp.


organism_name: Chloroflexota bacterium


organism_name: Acidobacteriota bacterium


organism_name: Candidatus Wukongarchaeota archaeon


organism_name: Desulfobacterales bacterium


organism_name: Planctomycetota bacterium


organism_name: Actinomycetes bacterium


organism_name: Candidatus Zixiibacteriota bacterium


organism_name: Pseudomonadota bacterium


organism_name: uncultured bacterium


organism_name: Bacteroidota bacterium


organism_name: Candidatus Actinomarina sp.


organism_name: uncultured Nitrososphaerota archaeon


organism_name: Gammaproteobacteria bacterium


organism_name: Thermoleophilia bacterium


organism_name: Candidatus Nitrotoga sp.


organism_name: Halopseudomonas xinjiangensis


organism_name: Robiginitalea sp.


organism_name: Flavobacteriales bacterium


organism_name: Candidatus Omnitrophota bacterium


organism_name: Puniceispirillum sp. (SeqCode)


organism_name: Gemmatimonadota bacterium


organism_name: Nocardiaceae bacterium


organism_name: Psychrobacter sp.


organism_name: Acidobacteriota bacterium


organism_name: Thermodesulfobacteriota bacterium


organism_name: Candidatus Glassiibacteriota bacterium


organism_name: Porticoccaceae bacterium


organism_name: Planctomycetota bacterium


organism_name: Myxococcota bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Gimesia maris


organism_name: Roseobacteraceae bacterium


organism_name: Woeseiaceae bacterium


organism_name: uncultured Nitrososphaerota archaeon


organism_name: Acidimicrobiales bacterium


organism_name: uncultured Nitrosopumilaceae archaeon


organism_name: uncultured Nitrosopumilales archaeon


organism_name: Burkholderiaceae bacterium


organism_name: uncultured archaeon


organism_name: Opitutia bacterium


organism_name: Candidatus Methylomirabilota bacterium


organism_name: Steroidobacteraceae bacterium


organism_name: Gemmatimonadota bacterium


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Pseudomonadota bacterium


organism_name: Gaiellaceae bacterium


organism_name: Chloroflexota bacterium


organism_name: Cutibacterium acnes


organism_name: Haemophilus sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Acidiferrobacterales bacterium


organism_name: Nitrospirota bacterium


organism_name: Woeseiaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Cyclobacteriaceae bacterium


organism_name: Burkholderiaceae bacterium


organism_name: uncultured Nitrosopumilaceae archaeon


organism_name: uncultured Nitrososphaerota archaeon


organism_name: Candidatus Bathyanammoxibius amoris


organism_name: Marinobacter sp.


organism_name: Candidatus Omnitrophota bacterium


organism_name: Solirubrobacterales bacterium


organism_name: uncultured bacterium


organism_name: uncultured archaeon


organism_name: Pseudomonadota bacterium


organism_name: Planctomycetota bacterium


organism_name: Candidatus Hydrogenedentota bacterium


organism_name: Chloroflexota bacterium


organism_name: Myxococcota bacterium


organism_name: Acidobacteriota bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Candidatus Altarchaeota archaeon


organism_name: Victivallales bacterium


organism_name: Flavobacteriales bacterium


organism_name: Paracoccaceae bacterium


organism_name: Rhodothermaceae bacterium


organism_name: Candidatus Pelagibacter sp.


organism_name: uncultured Thermococci archaeon


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Alphaproteobacteria bacterium


organism_name: uncultured Thermoproteales archaeon


organism_name: Candidatus Pelagibacterales bacterium


organism_name: uncultured bacterium


organism_name: Arenicellales bacterium


organism_name: uncultured archaeon


organism_name: Flavobacteriaceae bacterium


organism_name: Woeseiaceae bacterium


organism_name: Gammaproteobacteria bacterium


organism_name: Candidatus Dadabacteria bacterium


organism_name: Pseudomonadales bacterium


organism_name: Chloroflexota bacterium


organism_name: Cryomorphaceae bacterium


organism_name: Lentisphaeria bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Acidiferrobacteraceae bacterium


organism_name: Candidatus Aenigmatarchaeota archaeon


organism_name: Thermodesulfobacteriota bacterium


organism_name: Lysobacterales bacterium


organism_name: Rhodospirillaceae bacterium


organism_name: Candidatus Pelagibacteraceae bacterium


organism_name: Acidimicrobiia bacterium


organism_name: uncultured archaeon


organism_name: Alphaproteobacteria bacterium


organism_name: Candidatus Actinomarina sp.


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Gammaproteobacteria bacterium


organism_name: Paracoccaceae bacterium


organism_name: Myxococcota bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: uncultured bacterium


organism_name: Synechococcus sp.


organism_name: Bacteroidota bacterium


organism_name: Acidimicrobiaceae bacterium


organism_name: Bacteroidia bacterium


organism_name: Litorivicinus sp.


organism_name: uncultured Methanothermococcus sp.


organism_name: Aquiluna sp.


organism_name: Pseudomonadales bacterium


organism_name: Arenicellales bacterium


organism_name: Pseudothioglobus singularis (SeqCode)


organism_name: Woeseia sp.


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Alphaproteobacteria bacterium


organism_name: uncultured Nitrososphaerota archaeon


organism_name: Gammaproteobacteria bacterium


organism_name: Pseudomonadota bacterium


organism_name: Acidimicrobiia bacterium


organism_name: Dehalococcoidia bacterium


organism_name: Myxococcota bacterium


organism_name: Pirellulales bacterium


organism_name: Crocinitomix sp.


organism_name: Amylibacter sp.


organism_name: Flavobacteriales bacterium


organism_name: Wandonia sp.


organism_name: Polaribacter sp.


organism_name: Pseudomonadales bacterium


organism_name: Flavobacteriaceae bacterium


organism_name: Burkholderiaceae bacterium


organism_name: Porticoccaceae bacterium


organism_name: Alphaproteobacteria bacterium


organism_name: Paracoccaceae bacterium


organism_name: Luminiphilus sp.


organism_name: Myxococcales bacterium


organism_name: Planktomarina temperata


organism_name: Deltaproteobacteria bacterium


organism_name: uncultured Candidatus Poseidoniales archaeon


organism_name: Dehalococcoidia bacterium


organism_name: Myxococcota bacterium


organism_name: Candidatus Poribacteria bacterium


asm_submitter: Hospital Universitario Ramon y Cajal

organism_name: Pseudomonas aeruginosa


asm_submitter: WELLCOME SANGER INSTITUTE

group: invertebrate

organism_name: Vazella cf. pourtalesii


asm_submitter: Helmholtz-Zentrum fur Umweltforschung

organism_name: Alistipes onderdonkii


organism_name: Bacteroides uniformis


organism_name: uncultured bacterium


organism_name: Faecalibacterium prausnitzii


organism_name: Alistipes communis


organism_name: Duodenibacillus massiliensis


organism_name: uncultured archaeon


infraspecific_name: strain=LMG 24066

organism_name: Burkholderia arboris


infraspecific_name: strain=LMG 14939


infraspecific_name: strain=LMG 24269


infraspecific_name: strain=LMG 33096

organism_name: Burkholderia sp. LMG 33096


organism_name: Burkholderia sp. LMG 34232


infraspecific_name: strain=LMG 6988


infraspecific_name: strain=LMG 24270


infraspecific_name: strain=LMG 34232


organism_name: Roseburia faecis


organism_name: Segatella hominis


organism_name: Brachyspira aalborgi


organism_name: Enterobacter roggenkampii


organism_name: Actinomyces graevenitzii


organism_name: Sutterella wadsworthensis


organism_name: Agathobacter rectalis


organism_name: Bifidobacterium bifidum


organism_name: Megamonas funiformis


asm_name: Vibrio cholerae BB1

asm_submitter: Indian Biological Data Centre

isolate: Vibrio cholerae

organism_name: Vibrio cholerae O1 biovar El Tor str. N16961


asm_submitter: MMX-Group

organism_name: Streptomyces cellulosae


organism_name: Streptomyces speibonae


organism_name: Streptomyces diastaticus


organism_name: Streptomyces sp. SID14436


organism_name: uncultured bacterium


organism_name: Streptococcus vestibularis


organism_name: Senegalimassilia anaerobia


organism_name: Gemmiger qucibialis


organism_name: Bifidobacterium longum


organism_name: Porphyromonas gingivalis


asm_submitter: European Centre for Disease Prevention and Control

isolate: ECDC 1121

organism_name: Acinetobacter baumannii


asm_submitter: UK Health Security Agency

organism_name: Citrobacter freundii


organism_name: Klebsiella pneumoniae


organism_name: Bacteroides fragilis


organism_name: Dialister invisus


organism_name: Holdemanella biformis


organism_name: Akkermansia muciniphila


organism_name: Prevotella pectinovora


organism_name: [Ruminococcus] lactaris


organism_name: Bacteroides thetaiotaomicron


organism_name: Agathobacter rectalis


organism_name: uncultured bacterium


asm_submitter: Fraunhofer Institute for Cell Therapy and Immunology


asm_submitter: Limnological Station, University of Zurich

organism_name: Planktothrix rubescens


organism_name: Bacteroides stercoris


asm_submitter: university of alicante

organism_name: Methanobacteriota archaeon


isolate: ECDC 1029


asm_submitter: EMG

excluded_from_refseq: unverified source organism; derived from metagenome; genus undefined


organism_name: uncultured Methanobrevibacter sp.


organism_name: Prevotella sp.


organism_name: Bacteroides sp.


organism_name: Akkermansia sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Eubacterium sp. CAG:38


organism_name: Eubacteriales bacterium


organism_name: Veillonella sp.


organism_name: Bifidobacterium sp.


organism_name: Faecalibacterium sp.


organism_name: Oscillospiraceae bacterium


organism_name: Azospirillum sp.


organism_name: Sutterella sp.


organism_name: Bacillota bacterium


organism_name: Sutterella sp. AM11-39


organism_name: Gammaproteobacteria bacterium


organism_name: uncultured bacterium


organism_name: Streptococcus sp.


organism_name: uncultured Methanobrevibacter sp.


organism_name: Bacteroidales bacterium


organism_name: Pseudomonadota bacterium


organism_name: Prevotella sp.


organism_name: Phascolarctobacterium sp.


excluded_from_refseq: unverified source organism; derived from metagenome; fragmented assembly; genus undefined


organism_name: Bacteroides sp.


organism_name: Eubacteriales bacterium


organism_name: Veillonella sp.


organism_name: Anaerostipes sp.


organism_name: Alistipes sp.


organism_name: Butyrivibrio sp.


organism_name: Clostridium sp. CAG:417


organism_name: Lactobacillaceae bacterium


organism_name: Haemophilus sp.


organism_name: Bifidobacterium sp.


organism_name: Candidatus Melainabacteria bacterium


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Ruminococcus sp.


organism_name: uncultured Methanobrevibacter sp.


excluded_from_refseq: unverified source organism; derived from metagenome


organism_name: Dialister sp.


organism_name: Bacillota bacterium


organism_name: Mycoplasma sp. CAG:472


organism_name: Faecalibacterium sp.


organism_name: Akkermansia sp.


organism_name: Bacteroidales bacterium


organism_name: Erysipelotrichaceae bacterium


organism_name: Sutterella sp.


organism_name: uncultured archaeon


organism_name: Veillonella sp.


organism_name: Eubacteriales bacterium


organism_name: Prevotella sp. CAG:891


organism_name: Haemophilus sp.


organism_name: Bacteroides sp.


organism_name: uncultured bacterium


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Clostridium perfringens


organism_name: Bifidobacterium sp.


excluded_from_refseq: RefSeq annotation failed; annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome

organism_name: uncultured Methanobrevibacter sp.


organism_name: Clostridium sp.


organism_name: Parabacteroides sp.


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome

organism_name: Alistipes sp.


organism_name: Dialister sp.


excluded_from_refseq: RefSeq annotation failed; derived from metagenome


organism_name: Coprococcus sp.


organism_name: Akkermansia sp.


organism_name: Bacillota bacterium


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly; genome length too small

organism_name: [Ruminococcus] lactaris


organism_name: Ruminococcus sp.


organism_name: Clostridiales bacterium


organism_name: Clostridium sp. CAG:710


organism_name: Eubacteriales bacterium


organism_name: Bacteroidales bacterium


organism_name: Lactobacillales bacterium


excluded_from_refseq: from large multi-isolate project

isolate: ECDC 1048

organism_name: Acinetobacter baumannii


organism_name: uncultured bacterium


organism_name: Bacteroides sp.


organism_name: Collinsella sp.


organism_name: Roseburia sp.


organism_name: uncultured Methanobrevibacter sp.


isolate: ECDC 1043


organism_name: Faecalibacterium sp.


isolate: ECDC 1030


organism_name: Azospirillum sp.


organism_name: Gammaproteobacteria bacterium


organism_name: Ureaplasma parvum


organism_name: Sutterella sp.


organism_name: Veillonella sp.


organism_name: uncultured archaeon


organism_name: Clostridium sp.


organism_name: Collinsella tanakaei


organism_name: Methanobrevibacter smithii


organism_name: Parabacteroides sp.


isolate: ECDC 1055

organism_name: Acinetobacter baumannii


organism_name: Coprobacter sp.


organism_name: Eubacteriales bacterium


organism_name: Methanobrevibacter woesei


organism_name: Bacteroidales bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined


organism_name: uncultured Methanobrevibacter sp.


organism_name: uncultured bacterium


organism_name: Prevotella corporis


organism_name: Dialister sp.


organism_name: Bacteroides sp.


organism_name: Brachyspira pilosicoli


organism_name: Fenollaria timonensis


organism_name: Propionibacteriaceae bacterium


organism_name: Enterobacteriaceae bacterium


excluded_from_refseq: derived from metagenome


organism_name: Collinsella sp.


organism_name: Bifidobacterium sp.


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Burkholderiales bacterium


organism_name: Alistipes sp.


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Veillonella sp.


organism_name: Sutterella sp.


organism_name: Eubacteriales bacterium


organism_name: Streptococcus sp.


organism_name: Coprobacter sp.


organism_name: uncultured archaeon


organism_name: uncultured Methanobrevibacter sp.


organism_name: Akkermansia sp.


organism_name: Paraprevotella sp.


organism_name: Firmicutes bacterium CAG:460


organism_name: uncultured bacterium


organism_name: Methanobrevibacter smithii


organism_name: Lactobacillus sp.


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome


asm_submitter: University of Crete, Department of Biology

organism_name: Paenibacillus sp. SRL342


organism_name: Neobacillus sp. SRL179


organism_name: Bacillus sp. SRL337


organism_name: Bacillus sp. SRL543


organism_name: Paenibacillus sp. SRL398


organism_name: Clostridioides difficile


isolate: ECDC 1041

organism_name: Acinetobacter baumannii


isolate: ECDC 1058


isolate: ECDC 1016


isolate: ECDC 1037


isolate: ECDC 1024


isolate: ECDC 1039


isolate: ECDC 1023


isolate: ECDC 1054


isolate: ECDC 1061


isolate: ECDC 1060


isolate: ECDC 1033


isolate: ECDC 1032


isolate: ECDC 1047


isolate: ECDC 1015


isolate: ECDC 1022


isolate: ECDC 1062


isolate: ECDC 1050


isolate: ECDC 1020


isolate: ECDC 1051


isolate: ECDC 1021


isolate: ECDC 1044


isolate: ECDC 1028


isolate: ECDC 1057


isolate: ECDC 1052


isolate: ECDC 1056


isolate: ECDC 1059


isolate: ECDC 1018


isolate: ECDC 1025


isolate: ECDC 1017


isolate: ECDC 1063


isolate: ECDC 1046


isolate: ECDC 1034


isolate: ECDC 1031


isolate: ECDC 1026


isolate: ECDC 1045


isolate: ECDC 1038


isolate: ECDC 1019


isolate: ECDC 1040


isolate: ECDC 1042


asm_submitter: Instituto Nacional de Tecnologia Agropecuaria, Instituto de Microbiologia y Zoologia Agricola

isolate: Staphylococcus succinus subsp. succinus strain INTA AC1-8

organism_name: Staphylococcus succinus subsp. succinus


isolate: Enterobacter hormaechei subsp. xiangfangensis strain INTA AN1-1


isolate: Staphylococcus hominis subsp. novobiosepticus strain INTA AC1-4


infraspecific_name: strain=ECDC 1537

isolate: ECDC 1537


infraspecific_name: strain=ECDC 1539

isolate: ECDC 1539


infraspecific_name: strain=ECDC 1511

isolate: ECDC 1511


infraspecific_name: strain=ECDC 1509

isolate: ECDC 1509


infraspecific_name: strain=ECDC 1535

isolate: ECDC 1535


infraspecific_name: strain=ECDC 1531

isolate: ECDC 1531


infraspecific_name: strain=ECDC 1527

isolate: ECDC 1527


infraspecific_name: strain=ECDC 1525

isolate: ECDC 1525


excluded_from_refseq: fragmented assembly; from large multi-isolate project; genome length too large

infraspecific_name: strain=ECDC 1541

isolate: ECDC 1541


infraspecific_name: strain=ECDC 1517

isolate: ECDC 1517


excluded_from_refseq: unverified source organism; from large multi-isolate project

infraspecific_name: strain=ECDC 1519

isolate: ECDC 1519


infraspecific_name: strain=ECDC 1515

isolate: ECDC 1515


infraspecific_name: strain=ECDC 1507

isolate: ECDC 1507


isolate: ECDC 0833


infraspecific_name: strain=DCD 972

isolate: ECDC 0850


infraspecific_name: strain=KLA 166

isolate: ECDC 0847


infraspecific_name: strain=K 16 519

isolate: ECDC 0834


isolate: ECDC 0818


infraspecific_name: strain=A 6 133

isolate: ECDC 0832


isolate: ECDC 0843


isolate: ECDC 0817


isolate: ECDC 0823


isolate: ECDC 0805


isolate: ECDC 0841


isolate: ECDC 0800


isolate: ECDC 0812


isolate: ECDC 0795


infraspecific_name: strain=KLA 168

isolate: ECDC 0848


isolate: ECDC 0801


isolate: ECDC 0819


isolate: ECDC 0810


infraspecific_name: strain=MOC 19 519

isolate: ECDC 0853


infraspecific_name: strain=A 166 881

isolate: ECDC 0806


isolate: ECDC 0804


isolate: ECDC 0799


isolate: ECDC 0824


isolate: ECDC 0798


infraspecific_name: strain=C 692 166

isolate: ECDC 0808


infraspecific_name: strain=KLA 3376

isolate: ECDC 0856


isolate: ECDC 0802


isolate: ECDC 0842


infraspecific_name: strain=A 160 876

isolate: ECDC 0811


infraspecific_name: strain=CH 13 876 2)

isolate: ECDC 0836


isolate: ECDC 0820


isolate: ECDC 0846


isolate: ECDC 0837


isolate: ECDC 0797


infraspecific_name: strain=CH 13 430 1)

isolate: ECDC 0835


infraspecific_name: strain=CH 16 800

isolate: ECDC 0828


infraspecific_name: strain=HEM 3158

isolate: ECDC 0849


isolate: ECDC 0821


infraspecific_name: strain=HEM 5437

isolate: ECDC 0854


infraspecific_name: strain=A 167 790

isolate: ECDC 0807


isolate: ECDC 0815


infraspecific_name: strain=ISZP 1949

isolate: ECDC 0855


infraspecific_name: strain=ISZP 1604

isolate: ECDC 0851


infraspecific_name: strain=C 656 043

isolate: ECDC 0813


isolate: ECDC 0803


infraspecific_name: strain=A 159 285

isolate: ECDC 0814


organism_name: Pseudomonas aeruginosa


isolate: ECDC 2095


organism_name: Firmicutes bacterium CAG:345


organism_name: Parabacteroides sp.


organism_name: Bacillota bacterium


organism_name: Dialister sp.


organism_name: Faecalibacterium sp.


organism_name: Alistipes sp. CAG:435


isolate: ECDC 2093


isolate: ECDC 2094


isolate: ECDC 2086


isolate: ECDC 2092


isolate: ECDC 2090


isolate: ECDC 2089


isolate: ECDC 2096


isolate: ECDC 2088


organism_name: Eubacteriales bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Coprobacillus sp.


organism_name: Streptococcus sp.


organism_name: Eubacterium sp. CAG:252


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Ruminococcus sp.


organism_name: Roseburia sp.


organism_name: Lachnospiraceae bacterium


organism_name: Veillonella sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Clostridiales bacterium


organism_name: Odoribacter sp.


organism_name: Prevotellaceae bacterium


organism_name: Bacillota bacterium


organism_name: Sutterella sp.


organism_name: uncultured bacterium


organism_name: Azospirillum sp. 51_20


organism_name: Collinsella sp.


organism_name: Eubacteriales bacterium


organism_name: Alistipes sp.


organism_name: Clostridium sp.


organism_name: Bacteroidales bacterium


organism_name: Dialister sp.


organism_name: Oscillospiraceae bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Clostridium sp. CAG:253


organism_name: Mobiluncus sp.


organism_name: Clostridiales bacterium


organism_name: Odoribacter sp.


isolate: ECDC 1125

organism_name: Acinetobacter baumannii


isolate: ECDC 1118


isolate: ECDC 1110


isolate: ECDC 1133


isolate: ECDC 1132


isolate: ECDC 1153


isolate: ECDC 1140


isolate: ECDC 1167


isolate: ECDC 1102


isolate: ECDC 1176


isolate: ECDC 1139


isolate: ECDC 1112


isolate: ECDC 1100


organism_name: Mitsuokella jalaludinii


isolate: ECDC 1130


isolate: ECDC 1119


isolate: ECDC 1148


isolate: ECDC 1174


organism_name: Bacteroides sp. CAG:545


organism_name: Sutterella sp.


isolate: ECDC 1141


isolate: ECDC 1142


organism_name: Clostridium sp. CAG:169


isolate: ECDC 1111


isolate: ECDC 1099


isolate: ECDC 1107


isolate: ECDC 1150


isolate: ECDC 1109


isolate: ECDC 1145


isolate: ECDC 1168


isolate: ECDC 1151


isolate: ECDC 1120


isolate: ECDC 1126


isolate: ECDC 1136


organism_name: Lactobacillaceae bacterium


organism_name: Eubacteriales bacterium


isolate: ECDC 1122


isolate: ECDC 1128


isolate: ECDC 1138


isolate: ECDC 1163


isolate: ECDC 1129


isolate: ECDC 1172


isolate: ECDC 1116


excluded_from_refseq: unverified source organism; derived from metagenome; genus undefined

organism_name: uncultured bacterium


isolate: ECDC 1106


isolate: ECDC 1171


isolate: ECDC 1105


isolate: ECDC 1127


isolate: ECDC 1175


isolate: ECDC 1103


isolate: ECDC 1123


isolate: ECDC 1170


isolate: ECDC 1143


isolate: ECDC 1131


isolate: ECDC 1152


isolate: ECDC 1108


isolate: ECDC 1124


organism_name: Prevotella sp.


organism_name: Bacteroidales bacterium


organism_name: Alistipes sp.


organism_name: Ruminococcus sp.


organism_name: Bacillota bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Dialister sp.


organism_name: Faecalibacterium sp.


organism_name: Phascolarctobacterium sp.


organism_name: Clostridiales bacterium


organism_name: Fusobacterium sp.


organism_name: Clostridia bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Phascolarctobacterium sp. CAG:266


organism_name: Odoribacter sp.


organism_name: Bifidobacterium sp.


organism_name: Coprococcus sp.


organism_name: Prevotella intermedia


organism_name: Prevotellaceae bacterium


organism_name: Alistipes sp. CAG:435


organism_name: Bacteroidales bacterium


isolate: ECDC 1144

organism_name: Acinetobacter baumannii


isolate: ECDC 1114


organism_name: Eubacteriales bacterium


isolate: ECDC 1177


isolate: ECDC 1169


isolate: ECDC 1173


organism_name: Ruminococcus sp.


excluded_from_refseq: unverified source organism; fragmented assembly; from large multi-isolate project; genome length too small

isolate: ECDC 1164


isolate: ECDC 1098


organism_name: Alistipes sp.


isolate: ECDC 1137


isolate: ECDC 1165


isolate: ECDC 1101


isolate: ECDC 1147


isolate: ECDC 1135


isolate: ECDC 1158


isolate: ECDC 1104


isolate: ECDC 1166


isolate: ECDC 1113


organism_name: Succinivibrionaceae bacterium


organism_name: Collinsella sp.


isolate: ECDC 1134


isolate: ECDC 1149


isolate: ECDC 1146


isolate: ECDC 1115


isolate: ECDC 1117


organism_name: Bacillota bacterium


organism_name: Phascolarctobacterium succinatutens


asm_submitter: Genoscope

organism_name: Anelassorhynchus sp. A-YGR7WVOHU


organism_name: Oscillospiraceae bacterium


asm_submitter: Imperial College London

isolate: Tracheal aspirate

organism_name: Pseudomonas aeruginosa


isolate: Superficial swab


excluded_from_refseq: unverified source organism; genome length too small

isolate: Urine


isolate: Blood Culture


isolate: Tissue


isolate: Fluid/Aspirate


isolate: Sputum


isolate: Wound swab


isolate: ECDC 1672


isolate: ECDC 1612


isolate: ECDC 1630


isolate: ECDC 1712


isolate: ECDC 1596


isolate: ECDC 1604


isolate: ECDC 1669


isolate: ECDC 1574


isolate: ECDC 1581


isolate: ECDC 1599


isolate: ECDC 1683


isolate: ECDC 1615


isolate: ECDC 1609


isolate: ECDC 1620


isolate: ECDC 1589


isolate: ECDC 1625


isolate: ECDC 1653


isolate: ECDC 1610


isolate: ECDC 1613


isolate: ECDC 1646


isolate: ECDC 1603


isolate: ECDC 1588


isolate: ECDC 1587


isolate: ECDC 1680


isolate: ECDC 1706


isolate: ECDC 1582


isolate: ECDC 1643


isolate: ECDC 1673


isolate: ECDC 1679


isolate: ECDC 1641


isolate: ECDC 1685


isolate: ECDC 1622


isolate: ECDC 1627


isolate: ECDC 1583


isolate: ECDC 1649


isolate: ECDC 1702


isolate: ECDC 1658


isolate: ECDC 1640


isolate: ECDC 1602


isolate: ECDC 1675


isolate: ECDC 1594


isolate: ECDC 1637


isolate: ECDC 1678


isolate: ECDC 1667


isolate: ECDC 1595


isolate: ECDC 1614


excluded_from_refseq: contaminated; derived from metagenome


organism_name: Parabacteroides sp. CAG:409


organism_name: Clostridium sp. CAG:465


organism_name: Allobaileyella intestinalis


isolate: ECDC 1654


isolate: ECDC 1668


isolate: ECDC 1661


isolate: ECDC 1652


isolate: ECDC 1666


isolate: ECDC 1682


isolate: ECDC 1598


isolate: ECDC 1663


isolate: ECDC 1623


isolate: ECDC 1611


isolate: ECDC 1607


isolate: ECDC 1676


isolate: ECDC 1728


isolate: ECDC 1605


isolate: ECDC 1584


isolate: ECDC 1601


isolate: ECDC 1686


isolate: ECDC 1691


isolate: ECDC 1713


isolate: ECDC 1585


isolate: ECDC 1688


organism_name: Faecalibacterium sp.


isolate: ECDC 1723


isolate: ECDC 1642


isolate: ECDC 1692


isolate: ECDC 1638


isolate: ECDC 1671


isolate: ECDC 1662


isolate: ECDC 1629


isolate: ECDC 1621


isolate: ECDC 1660


isolate: ECDC 1704


isolate: ECDC 1655


isolate: ECDC 1592


isolate: ECDC 1632


isolate: ECDC 1580


isolate: ECDC 1618


isolate: ECDC 1635


isolate: ECDC 1650


isolate: ECDC 1696


isolate: ECDC 1639


isolate: ECDC 1722


isolate: ECDC 1703


isolate: ECDC 1600


isolate: ECDC 1651


isolate: ECDC 1687


isolate: ECDC 1628


isolate: ECDC 1616


isolate: ECDC 1726


organism_name: Eubacterium sp. CAG:274


organism_name: Roseburia sp.


organism_name: Clostridium sp. AF27-2AA


organism_name: uncultured bacterium


organism_name: Eubacteriales bacterium


organism_name: Firmicutes bacterium CAG:129


organism_name: Lachnospiraceae bacterium


organism_name: Clostridia bacterium


organism_name: Bacteroidales bacterium


organism_name: Clostridiales bacterium


organism_name: Ruminococcus sp.


organism_name: Oscillospiraceae bacterium


organism_name: Ruminococcus sp. CAG:579


organism_name: Prevotella sp.


organism_name: Butyrivibrio sp. CAG:318


organism_name: Lentisphaeria bacterium


organism_name: Alistipes sp.


organism_name: Bacillota bacterium


organism_name: Sutterella sp.


organism_name: Acetobacter sp.


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Fusobacterium ulcerans


organism_name: Eubacteriales bacterium


organism_name: Azospirillum sp. 51_20


organism_name: Bifidobacterium sp.


organism_name: Lachnospiraceae bacterium


organism_name: Paraprevotella sp.


organism_name: Clostridium sp. CAG:465


organism_name: Oscillibacter sp.


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome


organism_name: Ruminococcus sp.


organism_name: Collinsella sp.


organism_name: Roseburia sp.


organism_name: Clostridium sp. CAG:710


organism_name: Catenibacterium sp.


organism_name: uncultured bacterium


organism_name: Clostridium sp.


organism_name: Odoribacter sp.


organism_name: Bacteroidales bacterium


organism_name: Bacillota bacterium


organism_name: Eubacteriales bacterium


organism_name: Anaerotruncus sp. CAG:390


organism_name: Coriobacteriia bacterium


organism_name: Haemophilus sp.


organism_name: Oscillospiraceae bacterium


organism_name: Cryptobacterium sp. CAG:338


organism_name: Mobiluncus sp.


organism_name: Ruminococcus sp.


organism_name: Bacteroides sp.


excluded_from_refseq: contaminated; annotation fails MAG completeness check; derived from metagenome


organism_name: Bifidobacterium sp.


organism_name: Prevotella sp.


organism_name: Firmicutes bacterium CAG:884


organism_name: Clostridia bacterium


organism_name: Clostridiales bacterium


organism_name: Bacteroides sp. 43_108


organism_name: Bacteroides sp. CAG:545


organism_name: Clostridium sp.


organism_name: Collinsella sp.


organism_name: Eubacteriales bacterium


isolate: ECDC 1718

organism_name: Acinetobacter baumannii


isolate: ECDC 1689


isolate: ECDC 1647


isolate: ECDC 1624


isolate: ECDC 1674


isolate: ECDC 1633


isolate: ECDC 1710


isolate: ECDC 1575


isolate: ECDC 1695


isolate: ECDC 1648


isolate: ECDC 1606


isolate: ECDC 1617


isolate: ECDC 1699


isolate: ECDC 1593


isolate: ECDC 1681


isolate: ECDC 1631


isolate: ECDC 1698


isolate: ECDC 1657


isolate: ECDC 1708


isolate: ECDC 1608


isolate: ECDC 1659


isolate: ECDC 1597


isolate: ECDC 1714


isolate: ECDC 1711


isolate: ECDC 1727


isolate: ECDC 1645


isolate: ECDC 1724


isolate: ECDC 1586


isolate: ECDC 1576


isolate: ECDC 1725


isolate: ECDC 1716


isolate: ECDC 1578


isolate: ECDC 1590


isolate: ECDC 1665


organism_name: Bacteroidales bacterium


organism_name: Phascolarctobacterium succinatutens


organism_name: Butyricicoccus porcorum


organism_name: Anaerotruncus sp. CAG:390


organism_name: Prevotella sp. CAG:1031


organism_name: Roseburia sp.


organism_name: Ruminococcus sp.


organism_name: Veillonella sp.


organism_name: Prevotella sp.


organism_name: Bacillota bacterium


organism_name: Odoribacter sp.


organism_name: Lachnospiraceae bacterium


organism_name: Sutterella sp.


organism_name: Oscillospiraceae bacterium


organism_name: uncultured bacterium


organism_name: Eubacteriales bacterium


organism_name: Faecalibacterium sp.


organism_name: Bacteroides sp.


organism_name: Collinsella sp.


organism_name: Coprococcus sp.


organism_name: Alistipes sp.


organism_name: Alphaproteobacteria bacterium


organism_name: Bifidobacterium sp.


organism_name: Catenibacterium sp.


organism_name: Eubacterium sp. CAG:274


organism_name: Bilophila sp.


organism_name: Pseudomonadota bacterium


organism_name: Clostridium sp.


organism_name: Ruminococcus sp.


organism_name: Azospirillum sp. 51_20


excluded_from_refseq: unverified source organism; derived from metagenome; fragmented assembly; genus undefined


organism_name: Phascolarctobacterium succinatutens


organism_name: Lachnospiraceae bacterium


organism_name: Verrucomicrobiota bacterium


organism_name: Prevotella sp.


organism_name: Clostridiales bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Succinivibrionaceae bacterium


organism_name: Clostridium sp. CAG:594


organism_name: uncultured bacterium


organism_name: Collinsella sp.


organism_name: Eubacteriales bacterium


organism_name: Bacillota bacterium


organism_name: Bacteroidales bacterium


organism_name: Clostridium sp. CAG:169


organism_name: Butyrivibrio sp.


organism_name: Megamonas sp.


organism_name: Lactobacillaceae bacterium


organism_name: Ruminococcus sp.


organism_name: Akkermansia sp.


organism_name: Odoribacteraceae bacterium


organism_name: Acholeplasma sp. CAG:878


organism_name: Megasphaera sp.


organism_name: Oscillospiraceae bacterium


organism_name: Acidaminococcus sp.


organism_name: Eubacterium sp. CAG:274


organism_name: Anaerotruncus sp. CAG:390


organism_name: [Ruminococcus] lactaris


organism_name: Eubacteriales bacterium


organism_name: Eubacterium ventriosum


organism_name: Bilophila sp.


organism_name: uncultured bacterium


organism_name: Bacillota bacterium


organism_name: Bifidobacterium sp.


organism_name: Alistipes sp.


organism_name: Ruminococcus sp.


organism_name: Coprococcus sp.


organism_name: Clostridia bacterium


organism_name: Faecalibacterium sp.


asm_submitter: BIOLOGY CENTRE CAS, INSTITUTE OF HYDROBIOLOGY

organism_name: uncultured Ilumatobacteraceae bacterium


organism_name: Actinomycetota bacterium 51546


organism_name: Acetobacteraceae bacterium PAMC 26568


organism_name: uncultured archaeon


organism_name: Candidatus Limnocylindrus sp.


organism_name: Candidatus Nanopelagicaceae bacterium


organism_name: Methylophilaceae bacterium Uisw_097


organism_name: Actinomycetes bacterium


organism_name: uncultured Armatimonadota bacterium


organism_name: Candidatus Methylopumilus universalis


organism_name: uncultured bacterium


organism_name: uncultured Pseudomonadota bacterium


organism_name: Bacteroidota bacterium CRBC_G3130


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; many frameshifted proteins

organism_name: Vulcanococcus sp.


organism_name: Candidatus Planktophila versatilis


organism_name: Actinomycetales bacterium Bac181


organism_name: Acidimicrobiia bacterium


organism_name: Candidatus Woesearchaeota archaeon


organism_name: Candidatus Nanopelagicus sp.


organism_name: uncultured Chitinophagales bacterium


organism_name: Actinomycetota bacterium 51546


organism_name: uncultured Legionellales bacterium


organism_name: uncultured Ilumatobacteraceae bacterium


organism_name: Candidatus Nanopelagicaceae bacterium


excluded_from_refseq: unverified source organism; derived from metagenome; genome length too small

organism_name: Bifidobacterium breve UCC2003


organism_name: Chlamydiota bacterium hydrae JB


organism_name: Hyphomicrobiales bacterium G4i25


organism_name: Methylococcaceae bacterium NSO1


organism_name: Candidatus Saccharimonadota bacterium


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Bifidobacterium polysaccharolyticum


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: uncultured Verrucomicrobiota bacterium


organism_name: Enterococcus faecium


excluded_from_refseq: fragmented assembly


excluded_from_refseq: derived from metagenome; fragmented assembly; genus undefined

organism_name: uncultured bacterium


asm_submitter: Southern Federal University


excluded_from_refseq: derived from metagenome

organism_name: Duodenibacillus massiliensis


organism_name: uncultured archaeon


organism_name: Anaerostipes hadrus


organism_name: Thomasclavelia ramosa


organism_name: Bacteroides caccae


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too small

organism_name: Eggerthella lenta


organism_name: Alistipes shahii


organism_name: Halomonas heilongjiangensis


organism_name: Parabacteroides distasonis


organism_name: Phascolarctobacterium sp.


organism_name: Dialister succinatiphilus


organism_name: Roseburia sp.


organism_name: Succinivibrionaceae bacterium


organism_name: Eubacteriales bacterium


isolate: Fluid/Aspirate

organism_name: Pseudomonas aeruginosa


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome


organism_name: Azospirillum sp.


organism_name: Oscillospiraceae bacterium


organism_name: Alistipes sp.


organism_name: Oscillibacter sp.


organism_name: Bacteroidales bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Bacillota bacterium


organism_name: Odoribacteraceae bacterium


organism_name: Firmicutes bacterium CAG:882


organism_name: uncultured bacterium


excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Sutterella sp.


organism_name: Ruminococcus sp.


organism_name: Clostridiales bacterium


organism_name: Bacteroidota bacterium CRBC_G3130


organism_name: Candidatus Nanopelagicales bacterium


organism_name: Terriglobia bacterium


organism_name: Opitutia bacterium ISCC 52


organism_name: uncultured Ilumatobacteraceae bacterium


organism_name: Candidatus Saccharimonadota bacterium


organism_name: Candidatus Nanopelagicaceae bacterium


organism_name: Chlamydiota bacterium hydrae JB


organism_name: Actinomycetota bacterium 51546


organism_name: uncultured Pseudomonadota bacterium


organism_name: Candidatus Limnocylindrus sp.


organism_name: candidate division WWE3 bacterium


organism_name: Acidimicrobiales bacterium


organism_name: Sphingobacteriales bacterium


organism_name: Hyphomicrobiales bacterium G4i25


organism_name: uncultured bacterium


organism_name: Actinomycetes bacterium


organism_name: uncultured Candidatus Caenarcanales bacterium


organism_name: uncultured Pirellulales bacterium


organism_name: uncultured Candidatus Saccharimonadales bacterium


organism_name: Bifidobacterium polysaccharolyticum


organism_name: Methylococcaceae bacterium NSO1


organism_name: uncultured Roseiflexaceae bacterium


organism_name: Klebsiella pneumoniae


organism_name: Escherichia coli


excluded_from_refseq: from large multi-isolate project

isolate: ECDC 1644

organism_name: Acinetobacter baumannii


isolate: ECDC 1591


isolate: ECDC 1656


excluded_from_refseq: unverified source organism; from large multi-isolate project

isolate: ECDC 1684


isolate: ECDC 1701


organism_name: Bacteroides sp. CAG:545


organism_name: Eubacteriales bacterium


organism_name: Coprococcus sp.


organism_name: Roseburia sp.


organism_name: Bacillota bacterium


organism_name: Lachnospiraceae bacterium


organism_name: Prevotellaceae bacterium


organism_name: Faecalibacterium sp.


organism_name: Phascolarctobacterium sp.


organism_name: Clostridiales bacterium


organism_name: Oscillibacter sp.


organism_name: Butyrivibrio sp.


organism_name: Enterobacter kobei


asm_submitter: university of cape town

infraspecific_name: strain=Helcococcus ekapensis strain SA-HE-C1

isolate: Helcococcus ekapensis strain SA-HE-C1

organism_name: Helcococcus sp. SA-HE-C1


asm_submitter: University of Applied Sciences Mittweida

excluded_from_refseq: RefSeq annotation failed

infraspecific_name: strain=DSM 158

organism_name: Cereibacter sphaeroides


asm_submitter: University of Wroclaw

excluded_from_refseq: genome length too large

organism_name: Staphylococcus aureus


organism_name: Escherichia coli


organism_name: Pseudomonas paraeruginosa PA7


organism_name: Enterococcus faecalis


organism_name: Pseudomonas aeruginosa


excluded_from_refseq: fragmented assembly; genome length too large

organism_name: Streptomyces tauricus


asm_submitter: German Federation for Biological Data

organism_name: Thermodesulfovibrionia bacterium


excluded_from_refseq: many frameshifted proteins

organism_name: Bacillus halotolerans


organism_name: Nocardioides turkmenicus


organism_name: Eubacteriales bacterium


excluded_from_refseq: unverified source organism; derived from metagenome; genus undefined

organism_name: uncultured bacterium


organism_name: Oscillospiraceae bacterium


organism_name: Eubacterium sp. CAG:274


organism_name: Firmicutes bacterium CAG:129


organism_name: Lachnospiraceae bacterium


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: [Ruminococcus] lactaris


organism_name: Coriobacteriaceae bacterium


organism_name: Phascolarctobacterium sp.


organism_name: Alistipes sp.


organism_name: Prevotellaceae bacterium


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Ruminococcus sp.


organism_name: Dialister sp.


organism_name: Roseburia sp.


organism_name: Alistipes sp. CAG:435


excluded_from_refseq: annotation fails MAG completeness check; annotation fails completeness check; derived from metagenome

organism_name: Megamonas sp.


excluded_from_refseq: contaminated; derived from metagenome; fragmented assembly

organism_name: Eubacterium sp. CAG:38


organism_name: Acidaminococcus sp.


organism_name: Clostridium sp. CAG:440


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Eubacteriales bacterium


organism_name: Phascolarctobacterium sp. CAG:266


organism_name: Gammaproteobacteria bacterium


organism_name: Bacteroidales bacterium


organism_name: Treponema berlinense


organism_name: Sutterellaceae bacterium