annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

annotation_provider: NCBI RefSeq

asm_submitter: Naval Medical Research Center

assembly_level: Chromosome

assembly_type: haploid

excluded_from_refseq: unverified source organism

genome_rep: Full

group: bacteria

organism_name: Bacillus cereus m1293

paired_asm_comp: identical

release_type: Major

version_status: suppressed


organism_name: Bacillus cereus AH1273


annotation_name: Annotation submitted by NCBI RefSeq

asm_submitter: Center for Genomic Sciences, Allegheny-Singer Research Institute

assembly_level: Complete Genome

organism_name: Alkalihalophilus pseudofirmus OF4

version_status: replaced


asm_submitter: Univ. Wisconsin

infraspecific_name: strain=K-12 substr. MG1655

organism_name: Escherichia coli str. K-12 substr. MG1655


asm_submitter: J. Craig Venter Institute

excluded_from_refseq: many frameshifted proteins

organism_name: Bacillus anthracis str. A2012


excluded_from_refseq: annotation fails completeness check; many frameshifted proteins


asm_submitter: US DOE Joint Genome Institute (JGI-PGF)

group: archaea

organism_name: Methanococcus voltae A3


asm_submitter: Univ. Oklahoma

organism_name: Streptococcus pyogenes M1 GAS


asm_submitter: Microbial Genome Center of ChMPH

organism_name: Shigella flexneri 2a str. 301


asm_submitter: Washington University Genome Sequencing Center

infraspecific_name: strain=LT2; SGSC 1412; ATCC 700720

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2


asm_submitter: NIAB, Rural Development Administration

organism_name: Xanthomonas oryzae pv. oryzae KACC 10331


organism_name: Streptococcus mutans UA159


asm_submitter: TIGR

organism_name: Pseudomonas putida KT2440


infraspecific_name: strain=RSA 493

organism_name: Coxiella burnetii RSA 493


infraspecific_name: strain=PCA

organism_name: Geobacter sulfurreducens PCA


infraspecific_name: strain=ATCC 10987

organism_name: Bacillus cereus ATCC 10987


asm_submitter: DIVERSA

excluded_from_refseq: missing tRNA genes

organism_name: Nanoarchaeum equitans Kin4-M


organism_name: Helicobacter pylori 26695


organism_name: Borreliella burgdorferi B31


asm_submitter: GIRC

infraspecific_name: strain=Sakai substr. RIMD 0509952

organism_name: Escherichia coli O157:H7 str. Sakai


asm_submitter: Yale Univ.

excluded_from_refseq: missing strain identifier

organism_name: Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis


asm_submitter: Sanger Institute

organism_name: Clostridioides difficile 630


asm_submitter: Wellcome Trust Sanger Institute

organism_name: Pseudomonas [fluorescens] SBW25

paired_asm_comp: different


asm_submitter: Mycobacterium bovis sequencing teams

excluded_from_refseq: annotation fails completeness check

infraspecific_name: strain=BCG Pasteur 1173P2

organism_name: Mycobacterium tuberculosis variant bovis BCG str. Pasteur 1173P2


asm_submitter: NITE

organism_name: Streptomyces avermitilis MA-4680 = NBRC 14893


asm_submitter: The University of Tokyo, Japan

excluded_from_refseq: contaminated

infraspecific_name: strain=onion yellows

organism_name: Onion yellows phytoplasma OY-M


asm_submitter: Nara Institute of Science and Technology

infraspecific_name: strain=K-12 substr. W3110

organism_name: Escherichia coli str. K-12 substr. W3110


asm_submitter: Marine Biotechnology Institute Co., Ltd

excluded_from_refseq: genome length too large; not used as type

infraspecific_name: strain=SI

organism_name: Pelotomaculum thermopropionicum SI


asm_submitter: University of Vienna, Austria

organism_name: Candidatus Protochlamydia amoebophila UWE25


asm_submitter: Lab of Human Bacterial Pathogenesis

organism_name: Streptococcus pyogenes MGAS5005


asm_submitter: DOE Joint Genome Institute

organism_name: Histophilus somni 129PT


organism_name: Ruegeria pomeroyi DSS-3


asm_submitter: Rocky Mountain Laboratories, NIAID, NIH

infraspecific_name: strain=DAH

organism_name: Borrelia hermsii DAH


asm_submitter: Laboratory of Human Bacterial Pathenogenesis, Rocky Mountain Laboratories, NIAID

organism_name: Borrelia turicatae 91E135


organism_name: Streptococcus pyogenes MGAS6180


organism_name: Chlorobium chlorochromatii CaD3


organism_name: Hydrogenovibrio crunogenus XCL-2


infraspecific_name: strain=2.4.1; ATCC BAA-808

organism_name: Cereibacter sphaeroides 2.4.1


asm_submitter: Microbial Genome Center of ChMPH

organism_name: Bacillus cereus Q1


infraspecific_name: strain=ATCC 39073

organism_name: Moorella thermoacetica ATCC 39073


organism_name: Streptococcus pyogenes MGAS10270


organism_name: Streptococcus pyogenes MGAS2096


organism_name: Streptococcus pyogenes MGAS10750


asm_submitter: Information Genomique et Structurale, CNRS UPR2589

infraspecific_name: strain=Marseille

organism_name: Janthinobacterium sp. Marseille


organism_name: Rhodopseudomonas palustris BisB5


asm_submitter: TIGR

organism_name: Clostridium perfringens SM101


organism_name: Burkholderia orbicola AU 1054


infraspecific_name: strain=MCS

organism_name: Mycobacterium sp. MCS


organism_name: Chelativorans sp. BNC1


asm_submitter: Rocky Mountain Laboratories, National Institutes of Allergy and Infectious Disease, The National Institutes of Health

organism_name: Granulibacter bethesdensis CGDNIH1


asm_submitter: Beijing Institute of Genomics, Chinese Academy of Sciences,

organism_name: Streptococcus suis 05ZYH33


organism_name: Streptococcus suis 98HAH33


organism_name: Streptococcus pneumoniae D39


asm_submitter: University of British Columbia

organism_name: Rhodococcus jostii RHA1


organism_name: Shewanella sp. MR-7


organism_name: Rhodopseudomonas palustris BisA53


asm_submitter: US DOE Joint Genome Institute

organism_name: Candidatus Solibacter usitatus Ellin6076


infraspecific_name: strain=KMS

organism_name: Mycobacterium sp. KMS


asm_submitter: Yale University

infraspecific_name: strain=ATCC 17978

organism_name: Acinetobacter baumannii ATCC 17978


organism_name: Acidovorax sp. JS42


asm_submitter: Competence Network

organism_name: Bacillus velezensis FZB42


infraspecific_name: strain=JLS

organism_name: Mycobacterium sp. JLS


infraspecific_name: strain=DSM 265

organism_name: Chlorobium phaeovibrioides DSM 265


excluded_from_refseq: genome length too large

organism_name: Burkholderia vietnamiensis G4


organism_name: Enterobacter sp. 638


infraspecific_name: strain=PYR-GCK

organism_name: Mycolicibacterium gilvum PYR-GCK


infraspecific_name: strain=ATCC 17025

organism_name: Cereibacter sphaeroides ATCC 17025


asm_submitter: Center for Genomic Sciences, Allegheny-Singer Research Institute

infraspecific_name: strain=PittEE

organism_name: Haemophilus influenzae PittEE


infraspecific_name: strain=PittGG

organism_name: Haemophilus influenzae PittGG


infraspecific_name: strain=ymp

organism_name: Ectopseudomonas mendocina ymp


organism_name: Shewanella putrefaciens CN-32


organism_name: Dehalococcoides mccartyi BAV1


excluded_from_refseq: contaminated; not used as type

organism_name: Rhizorhabdus wittichii RW1


organism_name: Pseudomonas putida F1


organism_name: Psychrobacter sp. PRwf-1


organism_name: Staphylococcus aureus subsp. aureus JH1


asm_submitter: US DOE Joint Genome Institute (JGI-PGF)

organism_name: Methanococcus maripaludis C7


organism_name: Marinomonas sp. MWYL1


asm_submitter: Rocky Mountain Laboratories

infraspecific_name: strain=Iowa

organism_name: Rickettsia rickettsii str. Iowa


organism_name: Campylobacter curvus 525.92


organism_name: Campylobacter jejuni subsp. doylei 269.97


asm_submitter: University of Arizona

excluded_from_refseq: genome length too small

infraspecific_name: strain=GWSS

organism_name: Candidatus Karelsulcia muelleri GWSS


organism_name: Xanthobacter versatilis


organism_name: Campylobacter concisus 13826


asm_submitter: Human Genome Sequencing Center

organism_name: Bacillus pumilus SAFR-032


organism_name: Serratia proteamaculans 568


asm_submitter: University of Oklahoma Health Sciences Center

infraspecific_name: strain=NZ131; ATCC BAA-1633

organism_name: Streptococcus pyogenes NZ131


organism_name: Salinispora arenicola CNS-205


organism_name: Methanococcus maripaludis C6


excluded_from_refseq: missing rRNA genes

organism_name: Herpetosiphon aurantiacus DSM 785


asm_submitter: The Salmonella enterica serovar Arizonae Genome Sequencing Project

organism_name: Salmonella enterica subsp. arizonae serovar 62:z4,z23:-


asm_submitter: DOE Joint Genome Institute

infraspecific_name: strain=FSC147; GIEM 543

organism_name: Francisella tularensis subsp. mediasiatica FSC147


organism_name: Caulobacter sp. K31


asm_submitter: The Key Laboratory of Dairy Biotechnology and Bioengineering, Education Ministry of P. R. China, Department of Food Science and Engineering, Inner Mongolia Agricultural University, China

infraspecific_name: strain=Zhang

organism_name: Lacticaseibacillus casei str. Zhang


infraspecific_name: strain=ATCC 25017

organism_name: Francisella philomiragia subsp. philomiragia ATCC 25017


organism_name: Pseudomonas putida W619


infraspecific_name: strain=YPIII

organism_name: Yersinia pseudotuberculosis YPIII


asm_submitter: Center for Bioinformatics and Computational Biology

organism_name: Xanthomonas oryzae pv. oryzae PXO99A


organism_name: Polynucleobacter necessarius STIR1


asm_submitter: Institute for Genome Sciences

organism_name: Streptococcus pneumoniae G54


organism_name: Yersinia pseudotuberculosis PB1/+


asm_submitter: Los Alamos National Laboratory

infraspecific_name: strain=Eklund 17B

organism_name: Clostridium botulinum B str. Eklund 17B (NRP)


organism_name: Ralstonia pickettii 12J


asm_submitter: Centro de Ciencias Genomicas, Universidad Nacional Autonoma de Mexico

infraspecific_name: strain=CIAT 652

organism_name: Rhizobium etli CIAT 652


organism_name: Chlorobium phaeobacteroides BS1


asm_submitter: The Gordon and Betty Moore Foundation Marine Microbiology Initiative

infraspecific_name: strain='Deep ecotype'

organism_name: Alteromonas mediterranea


infraspecific_name: strain=Deep ecotype


asm_submitter: SUNY-Buffalo-CoE

organism_name: Acinetobacter baumannii AB307-0294


asm_submitter: TIGR

organism_name: Bacillus cereus AH187


asm_submitter: Case Western Reserve University

organism_name: Acinetobacter baumannii AB0057


asm_submitter: US DOE Joint Genome Institute

infraspecific_name: strain=Miyazaki F

organism_name: Nitratidesulfovibrio vulgaris str. 'Miyazaki F'


excluded_from_refseq: genome length too small; low gene count; missing tRNA genes

infraspecific_name: strain=Dsem

organism_name: Candidatus Hodgkinia cicadicola Dsem


asm_submitter: US DOE Joint Genome Institute (JGI-PGF)

infraspecific_name: strain=PCC 7425

organism_name: Cyanothece sp. PCC 7425


infraspecific_name: strain=ATCC 27774

organism_name: Desulfovibrio desulfuricans ATCC 27774


organism_name: Chloroflexus aurantiacus Y-400-fl


asm_submitter: University of Valencia

infraspecific_name: strain=Alboraia

organism_name: Blattabacterium sp. (Blattella germanica) str. Bge


asm_submitter: Crop Functional Genomics Center

organism_name: Burkholderia glumae BGR1


asm_submitter: State Key Laboratory for Infectious Disease Prevention and Control, Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention

organism_name: Yersinia pestis D182038


asm_submitter: The Laboratory for Genomics and Microbiology

organism_name: Edwardsiella ictaluri 93-146


asm_submitter: University of Arizona

infraspecific_name: strain=SMDSEM

organism_name: Candidatus Karelsulcia muelleri SMDSEM


excluded_from_refseq: RefSeq annotation failed

organism_name: Rhizobium leguminosarum bv. trifolii WSM1325


organism_name: Variovorax paradoxus S110


organism_name: Geobacillus sp. WCH70


infraspecific_name: strain=DSM 4810

organism_name: Brachybacterium faecium DSM 4810


organism_name: Ralstonia pickettii 12D


organism_name: Geobacter sp. M21


asm_submitter: University of Nevada Las Vegas

excluded_from_refseq: genus undefined

organism_name: Flavobacteriaceae bacterium 3519-10


asm_submitter: Horticultural Research Laboratory, USDA-ARS

organism_name: Candidatus Liberibacter asiaticus str. psy62


infraspecific_name: strain=PCC 8802

organism_name: Rippkaea orientalis PCC 8802


organism_name: Geobacillus sp. Y412MC61


organism_name: Saccharolobus solfataricus 98/2


infraspecific_name: strain=DSM 6068

organism_name: Pirellula staleyi DSM 6068


asm_submitter: J. Craig Venter Institute

organism_name: Gardnerella vaginalis 409-05


asm_submitter: JCVI

organism_name: Mageeibacillus indolicus UPII9-5


asm_submitter: Chr. Hansen A/S

organism_name: Bifidobacterium animalis subsp. lactis BB-12


asm_submitter: Forestry and Agricultural Biotechnology Institute

infraspecific_name: strain=LMG 20103

organism_name: Pantoea ananatis LMG 20103


infraspecific_name: strain=GT

organism_name: Dehalococcoides mccartyi GT


excluded_from_refseq: derived from single cell; genome length too small

infraspecific_name: strain=DMIN

organism_name: Candidatus Karelsulcia muelleri DMIN


asm_submitter: Genoscope

organism_name: Herminiimonas arsenicoxydans


asm_submitter: Institut Pasteur

organism_name: Mycobacterium leprae Br4923


asm_submitter: Technische Universitaet Muenchen

organism_name: Cronobacter turicensis z3032


asm_submitter: TIGR

infraspecific_name: strain=Rd KW20

organism_name: Haemophilus influenzae Rd KW20


asm_submitter: Univ. Valencia

organism_name: Candidatus Blochmanniella floridana


organism_name: Synechococcus sp. WH 7803


organism_name: Synechococcus sp. RCC307


asm_submitter: I.N.R.A., FRANCE

organism_name: Flavobacterium psychrophilum JIP02/86


asm_submitter: Welcome Trust Sanger Institute


infraspecific_name: strain=SDF

organism_name: Acinetobacter baumannii SDF


asm_submitter: Max Planck Institute

organism_name: Candidatus Phytoplasma australiense


infraspecific_name: strain=GPE PC73

organism_name: Xanthomonas albilineans GPE PC73


organism_name: Salinibacter ruber M8


organism_name: Chlamydia pneumoniae AR39


asm_submitter: Beijing Institute of Microbiology and Epidemiology

organism_name: Clostridium botulinum F str. 230613


asm_submitter: US DOE Joint Genome Institute (JGI-PGF)

organism_name: Thiomonas intermedia K12


asm_submitter: Public Health Agency of Canada

organism_name: Listeria monocytogenes 08-5578


asm_submitter: Environmental Microbiology Research Center,Institute of Microbiology,Chinese Academy of Sciences

infraspecific_name: strain=CNB-1 substr. CNB-2

organism_name: Comamonas testosteroni CNB-2


organism_name: Comamonas thiooxydans


asm_submitter: University of North Carolina at Chapel Hill

assembly_level: Scaffold

excluded_from_refseq: fragmented assembly

infraspecific_name: strain=race 4

organism_name: Pseudomonas savastanoi pv. glycinea str. race 4


asm_submitter: Center for Biotechnology, Bielefeld University


asm_submitter: J. Craig Venter Institute

infraspecific_name: strain=FH

organism_name: Mycoplasmoides pneumoniae FH


asm_submitter: University Federal of Minas Gerais

organism_name: Corynebacterium pseudotuberculosis C231


asm_submitter: Minas Gerais Genome Network

organism_name: Corynebacterium pseudotuberculosis 1002


asm_submitter: University of Melbourne

organism_name: Staphylococcus aureus subsp. aureus JKD6159


asm_submitter: Broad Institute

organism_name: Burkholderiales bacterium 1_1_47


organism_name: Desulfovibrio sp. 3_1_syn3


organism_name: Pseudomonas amygdali pv. mori str. 301020


organism_name: Pseudomonas syringae pv. japonica str. M301072


organism_name: Pseudomonas syringae pv. pisi str. 1704B


excluded_from_refseq: fragmented assembly; many frameshifted proteins

infraspecific_name: strain=Cit 7

organism_name: Pseudomonas syringae Cit 7


organism_name: Pseudomonas syringae pv. maculicola str. ES4326


excluded_from_refseq: unverified source organism

organism_name: Pseudomonas amygdali pv. lachrymans str. M302278


infraspecific_name: strain=DSM 50252

organism_name: Pseudomonas syringae pv. aptata str. DSM 50252


infraspecific_name: strain=ATCC 11528

organism_name: Pseudomonas amygdali pv. tabaci str. ATCC 11528


infraspecific_name: strain=DSM 17230

organism_name: Ignisphaera aggregans DSM 17230


organism_name: Pseudomonas amygdali pv. lachrymans str. M301315


asm_submitter: RIKEN Genomic Sciences Center (GSC)

infraspecific_name: strain=Rs-D17 genomovar Ri2008


asm_submitter: Genoscope

excluded_from_refseq: derived from metagenome

infraspecific_name: strain=Evry

organism_name: Cloacimonas acidaminivorans (SeqCode)


asm_submitter: TIGR

organism_name: Shewanella oneidensis MR-1


asm_submitter: Bumgarner Laboratory Department of Microbiology University of Washington


asm_submitter: IBL Leiden University

organism_name: Edwardsiella tarda FL6-60


asm_submitter: Baylor College of Medicine

infraspecific_name: strain=ATCC 10782

organism_name: Streptococcus pyogenes ATCC 10782


excluded_from_refseq: misassembled; not used as type

infraspecific_name: strain=ATCC 43715

organism_name: [Eubacterium] yurii subsp. margaretiae ATCC 43715


asm_submitter: Korea Research Institute of Bioscience and Biotechnology (KRIBB)

organism_name: Paenibacillus polymyxa E681


asm_submitter: Istituto di Teconologie Biomediche, Consiglio Nazionale delle Ricerche

excluded_from_refseq: many frameshifted proteins

organism_name: Streptococcus pneumoniae AP200


asm_submitter: University of Montana

infraspecific_name: strain=CARI

organism_name: Candidatus Zinderia insecticola CARI


organism_name: Candidatus Karelsulcia muelleri CARI


asm_submitter: US DOE Joint Genome Institute (JGI-PGF)

assembly_level: Contig

organism_name: Thermoanaerobacter wiegelii Rt8.B1


organism_name: Mesotoga prima MesG1.Ag.4.2


organism_name: Shewanella baltica BA175


organism_name: Sinorhizobium meliloti BL225C


organism_name: Sinorhizobium meliloti AK83


infraspecific_name: strain=Tu 4113

organism_name: Streptomyces violaceusniger Tu 4113


organism_name: Sphingobium chlorophenolicum L-1


organism_name: Escherichia coli KO11FL


asm_submitter: Research and Testing Laboratory

organism_name: Xylella fastidiosa subsp. fastidiosa GB514


organism_name: Thermoanaerobacter sp. X513


infraspecific_name: strain=NCTC 12261

organism_name: Streptococcus mitis NCTC 12261


asm_submitter: US DOE Joint Genome Institute

organism_name: Burkholderia sp. CCGE1003


asm_submitter: Technology Center of Bright Dairy & Food Co., Ltd

infraspecific_name: strain=ST-III

organism_name: Lactiplantibacillus plantarum ST-III


asm_submitter: University of Maryland

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Streptococcus infantis SK1302


asm_submitter: J. Craig Venter Institute

infraspecific_name: strain=LactinV 11V1-d

organism_name: Lactobacillus iners LactinV 11V1-d


infraspecific_name: strain=LactinV 09V1-c

organism_name: Lactobacillus iners LactinV 09V1-c


infraspecific_name: strain=LactinV 03V1-b

organism_name: Lactobacillus iners LactinV 03V1-b


infraspecific_name: strain=LactinV 01V1-a

organism_name: Lactobacillus iners LactinV 01V1-a


infraspecific_name: strain=SPIN 2503V10-D

organism_name: Lactobacillus iners SPIN 2503V10-D


asm_submitter: The Gordon and Betty Moore Foundation Microbial Genome Sequencing Project

organism_name: Aciduliprofundum boonei T469


asm_submitter: Moore Foundation

infraspecific_name: strain=MP

organism_name: Thermococcus barophilus MP


organism_name: Thermococcus sp. AM4


asm_submitter: Rede Paraense de Genômica e Proteômica

organism_name: Corynebacterium pseudotuberculosis I19


asm_submitter: Broad Institute

organism_name: Mycobacterium tuberculosis SUMu001


asm_submitter: Center Bioengineering RAS

organism_name: Oscillochloris trichoides DG-6


asm_submitter: Computational and Synthetic Biology Laboratory

organism_name: Eubacterium limosum KIST612


asm_submitter: DOE Joint Genome Institute

organism_name: Ferroplasma acidarmanus Fer1


asm_submitter: TIGR

excluded_from_refseq: annotation fails completeness check

organism_name: Vibrio cholerae RC385


organism_name: Vibrio cholerae V51


infraspecific_name: strain=C

organism_name: Mycobacterium tuberculosis C


organism_name: Pseudomonas aeruginosa C3719


organism_name: Pseudomonas aeruginosa 2192


excluded_from_refseq: unverified source organism; annotation fails completeness check; many frameshifted proteins

organism_name: Burkholderia cenocepacia PC184


organism_name: Burkholderia dolosa AU0158


asm_submitter: Washington University (WashU)

organism_name: Clostridioides difficile QCD-32g58


organism_name: Burkholderia pseudomallei 406e


asm_submitter: The Gordon and Betty Moore Foundation Marine Microbiology Initiative

organism_name: Parvularcula bermudensis HTCC2503


organism_name: Dokdonia sp. MED134


organism_name: Polaribacter sp. MED152


organism_name: Congregibacter litoralis KT71


organism_name: marine actinobacterium PHSC20C1


organism_name: Maribacter sp. HTCC2170


organism_name: Flavobacteria bacterium BBFL7


organism_name: Psychromonas sp. CNPT3


organism_name: gamma proteobacterium HTCC2207


infraspecific_name: strain=ATCC 700755

organism_name: Psychroflexus torquis ATCC 700755


organism_name: Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24


asm_submitter: Baylor College of Medicine

infraspecific_name: strain=ATCC 10953

organism_name: Fusobacterium polymorphum ATCC 10953


infraspecific_name: strain=Haarlem

organism_name: Mycobacterium tuberculosis str. Haarlem


organism_name: Rhodobacterales bacterium HTCC2255


organism_name: Vibrio cholerae AM-19226


organism_name: Francisella tularensis subsp. holarctica 257


infraspecific_name: strain=NCTC 8457

organism_name: Vibrio cholerae NCTC 8457


organism_name: Vibrio cholerae B33


organism_name: Vibrio cholerae MZO-2


organism_name: Vibrio cholerae 623-39


excluded_from_refseq: contaminated

organism_name: Vibrio campbellii HY01


organism_name: Vibrio parahaemolyticus AQ3810


asm_submitter: Washington University Genome Sequencing Center

excluded_from_refseq: genus undefined; not used as type

infraspecific_name: strain=DSM 15702

organism_name: [Eubacterium] siraeum DSM 15702


infraspecific_name: strain=DSM 753

organism_name: [Clostridium] leptum DSM 753


organism_name: Clostridium sp. SS2/1


infraspecific_name: strain=KZN 4207

organism_name: Mycobacterium tuberculosis KZN 4207


infraspecific_name: strain=KZN 605

organism_name: Mycobacterium tuberculosis KZN 605


organism_name: Hoeflea phototrophica DFL-43


organism_name: Phaeobacter inhibens 2.10


organism_name: Phaeobacter gallaeciensis DSM 26640


infraspecific_name: strain=Och 149

organism_name: Roseobacter litoralis Och 149


infraspecific_name: strain=ATCC 27064

organism_name: Streptomyces clavuligerus


excluded_from_refseq: contaminated; hybrid

organism_name: Escherichia coli O157:H7 str. EC4024


organism_name: Mycobacterium tuberculosis 94_M4241A


organism_name: Mycobacterium tuberculosis 02_1987


organism_name: Mycobacterium tuberculosis T92


organism_name: Mycobacterium tuberculosis EAS054


organism_name: Mycobacterium tuberculosis T85


infraspecific_name: strain=GM 1503

organism_name: Mycobacterium tuberculosis GM 1503


organism_name: Mycobacterium tuberculosis T17


organism_name: Clostridiales bacterium 1_7_47FAA


organism_name: Lacticaseibacillus paracasei subsp. paracasei 8700:2


organism_name: Octadecabacter antarcticus 307


organism_name: Verrucomicrobiia bacterium DG1235


organism_name: gamma proteobacterium HTCC5015


organism_name: Octadecabacter arcticus 238


infraspecific_name: strain=98-R604 INH-RIF-EM

organism_name: Mycobacterium tuberculosis '98-R604 INH-RIF-EM'


infraspecific_name: strain=ATCC 35198

organism_name: Proteus penneri ATCC 35198


infraspecific_name: strain=ATCC 43243

organism_name: [Bacteroides] pectinophilus ATCC 43243


infraspecific_name: strain=ATCC 27758

organism_name: Coprococcus comes ATCC 27758


organism_name: Lactobacillus jensenii 1153


organism_name: Lactobacillus gasseri MV-22


infraspecific_name: strain=DSM 1787

organism_name: [Clostridium] nexile DSM 1787


excluded_from_refseq: contaminated; not used as type


organism_name: Rhodobacteraceae bacterium HTCC2083


organism_name: Rhodobacterales bacterium Y4I


organism_name: beta proteobacterium KB13


asm_submitter: Gordon and Betty Moore Foundation Microbial Genome Sequencing Project

organism_name: Ruegeria sp. R11


asm_submitter: The Gordon and Betty Moore Foundation Microbial Genome Sequencing project

infraspecific_name: strain=DSM 12653

organism_name: Caldanaerobacter subterraneus subsp. pacificus DSM 12653


asm_submitter: Gordon and Betty Moore Foundation Marine Microbiology Initiative

organism_name: marine gamma proteobacterium HTCC2148


organism_name: Marinitoga piezophila KA3


infraspecific_name: strain=ATCC 33035

organism_name: Corynebacterium pseudogenitalium ATCC 33035


infraspecific_name: strain=NRRL 11379

organism_name: Streptomyces filamentosus NRRL 11379


organism_name: Neisseria gonorrhoeae FA19


organism_name: Neisseria gonorrhoeae MS11


asm_submitter: University of North Carolina at Chapel Hill

excluded_from_refseq: fragmented assembly; low quality sequence

organism_name: Pseudomonas coronafaciens pv. oryzae str. 1_6


organism_name: Bacteroides fragilis 3_1_12


organism_name: Parabacteroides sp. 2_1_7


organism_name: Bacteroides sp. 9_1_42FAA


organism_name: Bacteroides sp. D1


organism_name: Escherichia coli


organism_name: Enterococcus casseliflavus EC20


organism_name: Enterococcus faecium 1,231,408


asm_submitter: McGill University

infraspecific_name: strain=ATCC 12478

organism_name: Mycobacterium kansasii ATCC 12478


infraspecific_name: strain=DSM 1131

organism_name: Providencia rettgeri DSM 1131


organism_name: Roseibium alexandrii DFL-11


organism_name: Rhodobacteraceae bacterium KLH11


organism_name: gamma proteobacterium NOR5-3


infraspecific_name: strain=ATCC 9817

organism_name: Fusobacterium mortiferum ATCC 9817


organism_name: Fusobacterium periodonticum 2_1_31


organism_name: Fusobacterium vincentii 4_1_13


organism_name: Fusobacterium animalis 7_1


organism_name: Fusobacterium necrophorum D12


infraspecific_name: strain=ATCC 49185

organism_name: Fusobacterium ulcerans ATCC 49185


organism_name: Phocaeicola dorei 5_1_36/D4


organism_name: Citrobacter portucalensis


organism_name: Clostridium sp. 7_2_43FAA


organism_name: Escherichia sp. 4_1_40B


infraspecific_name: strain=ATCC 43879

organism_name: Helicobacter bilis ATCC 43879


infraspecific_name: strain=HOxBLS

organism_name: Oxalobacter paraformigenes


organism_name: Bacteroides sp. 4_3_47FAA


organism_name: Fusobacterium animalis D11


organism_name: Coprobacillus sp. D7


infraspecific_name: strain=DSM 5476

organism_name: [Clostridium] methylpentosum DSM 5476


infraspecific_name: strain=ATCC 25563

organism_name: Fusobacterium gonidiaformans ATCC 25563


organism_name: Bacteroides sp. D2


infraspecific_name: strain=ATCC 14019

organism_name: Gardnerella vaginalis ATCC 14019


asm_submitter: Baylor College of Medecine

infraspecific_name: strain=DSM 15829

organism_name: Fannyhessea vaginae DSM 15829


organism_name: Lactobacillus jensenii JV-V16


asm_submitter: BCM

infraspecific_name: strain=ATCC 25644

organism_name: Ligilactobacillus ruminis ATCC 25644


organism_name: Limosilactobacillus reuteri SD2112


asm_submitter: Human Microbiome Project

organism_name: Limosilactobacillus reuteri MM4-1A


organism_name: Staphylococcus aureus subsp. aureus TCH60


asm_submitter: Broad Institute

organism_name: Mycobacterium tuberculosis T46


organism_name: Mycobacterium tuberculosis CPHL_A


organism_name: Mycobacterium tuberculosis variant africanum K85


asm_submitter: The Sainsbury Laboratory

excluded_from_refseq: low quality sequence

organism_name: Xanthomonas vasicola pv. vasculorum NCPPB 702


infraspecific_name: strain=NCPPB 4381

organism_name: Xanthomonas vasicola pv. musacearum NCPPB 4381


infraspecific_name: strain=ATCC 11528

organism_name: Pseudomonas amygdali pv. tabaci str. ATCC 11528


organism_name: Bacteroides sp. 3_2_5


organism_name: Bacteroides thetaiotaomicron


organism_name: Escherichia sp. 1_1_43


infraspecific_name: strain=ATCC 27725

organism_name: Fusobacterium varium ATCC 27725


organism_name: Ruminococcus sp. 5_1_39BFAA


infraspecific_name: strain=ATCC 51271

organism_name: Catonella morbi ATCC 51271


excluded_from_refseq: genome length too large

infraspecific_name: strain=ATCC 49176

organism_name: Abiotrophia defectiva ATCC 49176


organism_name: Enterococcus faecium C68


organism_name: Staphylococcus aureus subsp. aureus 55/2053


asm_submitter: WUGSC

infraspecific_name: strain=ATCC BAA-1850

organism_name: Acetomicrobium hydrogeniformans ATCC BAA-1850


infraspecific_name: strain=DSM 15272

organism_name: Aeromicrobium marinum DSM 15272


infraspecific_name: strain=ATCC 19414

organism_name: Erysipelothrix rhusiopathiae ATCC 19414


asm_submitter: Naval Medical Research Center

excluded_from_refseq: contaminated; unverified source organism

organism_name: Bacillus cereus R309803


infraspecific_name: strain=ATCC 4342

organism_name: Bacillus cereus ATCC 4342


excluded_from_refseq: unverified source organism; many frameshifted proteins

organism_name: Bacillus cereus BDRD-ST26


organism_name: Bacillus cereus BDRD-ST196


organism_name: Bacillus cereus Rock3-28


organism_name: Bacillus cereus Rock3-29


organism_name: Bacillus cereus Rock3-42


organism_name: Bacillus cereus Rock4-18


organism_name: Bacillus cereus AH1271


organism_name: Bacillus cereus AH1272


infraspecific_name: strain=BGSC 4Y1

organism_name: Bacillus thuringiensis serovar tochigiensis BGSC 4Y1


organism_name: Bacillus thuringiensis serovar sotto str. T04001


organism_name: Citreicella sp. SE45


infraspecific_name: strain=WH 8109

organism_name: Synechococcus sp. WH 8109


organism_name: Ruegeria sp. TrichCH4B


infraspecific_name: strain=TC 6

organism_name: Enterococcus faecium TC 6


organism_name: Lactobacillus jensenii 27-2-CHN


organism_name: Lactobacillus crispatus MV-1A-US


organism_name: Streptococcus sp. 2_1_36FAA


infraspecific_name: strain=ATCC 49989

organism_name: Eubacterium saphenum ATCC 49989


organism_name: Bacteroides sp. 2_1_33B


organism_name: Bacteroides sp. 3_1_33FAA


organism_name: Fusobacterium vincentii 3_1_36A2


organism_name: Fusobacterium animalis 3_1_33


organism_name: Acinetobacter sp. RUH 2624


organism_name: Lactobacillus jensenii 115-3-CHN


infraspecific_name: strain=ATCC 700633

organism_name: Granulicatella elegans ATCC 700633


organism_name: Parabacteroides sp. 20_3


asm_submitter: Unite de Recherche sur les Maladies Infectieuses et Tropicales Emergentes CNRS-IRD UMR 6236, Marcel, France

organism_name: Legionella drancourtii LLAP12


organism_name: Actinomyces sp. oral taxon 848 str. F0332


organism_name: Prevotella sp. oral taxon 299 str. F0039


excluded_from_refseq: fragmented assembly

organism_name: Pseudomonas syringae pv. syringae FF5


organism_name: Acinetobacter baumannii 6013150


organism_name: Acinetobacter baumannii 6013113


organism_name: Acinetobacter baumannii 6014059


excluded_from_refseq: unverified source organism

organism_name: Prevotella sp. oral taxon 472 str. F0295


excluded_from_refseq: genus undefined

organism_name: Erysipelotrichaceae bacterium 5_2_54FAA


organism_name: alpha proteobacterium HIMB114


asm_submitter: USC School of Dentistry


asm_submitter: University of Washington Department of Microbiology


organism_name: Bacteroides sp. 3_1_19


organism_name: Bacteroidetes oral taxon 274 str. F0058


infraspecific_name: strain=ATCC 29453

organism_name: Simonsiella muelleri ATCC 29453


infraspecific_name: strain=ATCC 35896

organism_name: Filifactor alocis ATCC 35896


organism_name: Fusobacterium vincentii 3_1_27


asm_submitter: University of Liverpool

organism_name: Campylobacter jejuni subsp. jejuni 414


asm_submitter: University of Wisconsin-Madison

infraspecific_name: strain=NCPPB 3335

organism_name: Pseudomonas savastanoi pv. savastanoi NCPPB 3335


infraspecific_name: strain=ATCC 33707

organism_name: Prescottella equi ATCC 33707


asm_submitter: Baylor College of Medicine

infraspecific_name: strain=ATCC 15912

organism_name: Streptococcus parasanguinis ATCC 15912


infraspecific_name: strain=ATCC 17931

organism_name: Rothia dentocariosa ATCC 17931


asm_submitter: Shandong Agricultural University

organism_name: Paenibacillus polymyxa SC2


organism_name: Erysipelotrichaceae bacterium 3_1_53


asm_submitter: Fritz Lipmann Institute (former Institute of Molecular Biotechnology, IMB)

infraspecific_name: strain=PKo

organism_name: Borreliella afzelii PKo


asm_submitter: Institute for Genome Sciences

organism_name: Escherichia coli 1827-70


organism_name: Mycobacterium tuberculosis SUMu002


asm_submitter: US DOE Joint Genome Institute (JGI-PGF)

infraspecific_name: strain=DSM 5305

organism_name: Rubinisphaera brasiliensis DSM 5305


asm_submitter: Kangwon National University

excluded_from_refseq: misassembled

organism_name: Erwinia sp. Ejp617


excluded_from_refseq: many frameshifted proteins

organism_name: Lactobacillus crispatus CTV-05


organism_name: Geobacillus sp. Y4.1MC1


excluded_from_refseq: RefSeq annotation failed

infraspecific_name: strain=DSM 2088

organism_name: Methanothermus fervidus DSM 2088


infraspecific_name: strain=DSM 18603

organism_name: Mucilaginibacter paludis DSM 18603


asm_submitter: Oregon State University

organism_name: Pseudomonas fluorescens WH6


organism_name: Escherichia coli TW10598


asm_submitter: Korea Research Institute of Bioscience and Biotechnology (KRIBB)

excluded_from_refseq: unverified source organism; not used as type

infraspecific_name: strain=KCTC 3774

organism_name: Leuconostoc inhae KCTC 3774


asm_submitter: DOE Joint Genome Institute

excluded_from_refseq: annotation fails completeness check

infraspecific_name: strain=DO

organism_name: Enterococcus faecium DO


infraspecific_name: strain=Dixon

organism_name: Xylella fastidiosa Dixon


organism_name: Xylella fastidiosa subsp. sandyi Ann-1


organism_name: Bifidobacterium longum DJO10A


asm_submitter: TIGR

infraspecific_name: strain=4b H7858

organism_name: Listeria monocytogenes serotype 4b str. H7858


excluded_from_refseq: unverified source organism; low quality sequence

organism_name: Bacillus cereus G9241


organism_name: Streptococcus suis 89/1591


asm_submitter: Department of Medical Microbiology and Hospital Hygiene, University Hospital Rostock, Germany

excluded_from_refseq: genome length too small

infraspecific_name: strain=M49 591

organism_name: Streptococcus pyogenes M49 591


excluded_from_refseq: contaminated

isolate: wAna

organism_name: Wolbachia endosymbiont of Drosophila ananassae


organism_name: Wolbachia endosymbiont of Drosophila simulans


asm_submitter: 454 Life Sciences Corporation

organism_name: Mycoplasmoides genitalium G37


infraspecific_name: strain=Sapulpa

organism_name: Ehrlichia chaffeensis str. Sapulpa


asm_submitter: Integrated Genomics

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

infraspecific_name: strain=ATCC 35646

organism_name: Bacillus thuringiensis serovar israelensis ATCC 35646


organism_name: Streptococcus agalactiae 18RS21


organism_name: Streptococcus agalactiae 515


organism_name: Streptococcus agalactiae CJB111


organism_name: Streptococcus agalactiae COH1


organism_name: Streptococcus agalactiae H36B


organism_name: Escherichia coli B7A


organism_name: Escherichia coli E110019


organism_name: Escherichia coli B171


release_type: Minor


organism_name: Escherichia coli 53638


organism_name: Vibrio cholerae V52


organism_name: Shigella dysenteriae 1012


infraspecific_name: strain=Hc (Homalodisca coagulata)

organism_name: Candidatus Karelsulcia muelleri str. Hc (Homalodisca coagulata)


organism_name: Yersinia pestis biovar Orientalis str. IP275


organism_name: delta proteobacterium MLMS-1


asm_submitter: Center for Bioinformatics and Computational Biology

organism_name: Xanthomonas oryzae pv. oryzicola BLS256


asm_submitter: Beijing Institute of Genomics, Chinese Academy of Sciences,

organism_name: Streptococcus suis 05HAS68


asm_submitter: Broad Institute

excluded_from_refseq: fragmented assembly; genome length too small

infraspecific_name: strain=FSL F2-515

organism_name: Listeria monocytogenes FSL F2-515


infraspecific_name: strain=FSL J1-175

organism_name: Listeria monocytogenes FSL J1-175


infraspecific_name: strain=FSL J1-208

organism_name: Listeria monocytogenes FSL J1-208


infraspecific_name: strain=FSL J2-003

organism_name: Listeria monocytogenes FSL J2-003


infraspecific_name: strain=FSL J2-071

organism_name: Listeria monocytogenes FSL J2-071


infraspecific_name: strain=FSL J2-064

organism_name: Listeria monocytogenes FSL J2-064


infraspecific_name: strain=FSL R2-503

organism_name: Listeria monocytogenes FSL R2-503


infraspecific_name: strain=FSL R2-561

organism_name: Listeria monocytogenes FSL R2-561


infraspecific_name: strain=Finland 1988

organism_name: Listeria monocytogenes Finland 1998


organism_name: Listeria monocytogenes J0161


organism_name: Listeria monocytogenes LO28


organism_name: Listeria monocytogenes 10403S


asm_submitter: SymBio Corporation

organism_name: Candidatus Endoriftia persephone str. Hot96_1+Hot96_2


asm_submitter: Section of Microbial Pathogenesis, School of Medicine, Yale University

organism_name: Campylobacter jejuni subsp. jejuni 81-176


asm_submitter: University of Washington

organism_name: Francisella tularensis subsp. holarctica FSC200


asm_submitter: NMRC

organism_name: Campylobacter jejuni subsp. jejuni CG8486


asm_submitter: TGen

organism_name: Yersinia pestis FV-1


infraspecific_name: strain=MSU Goat Q177

organism_name: Coxiella burnetii 'MSU Goat Q177'


organism_name: Vibrio cholerae 1587


organism_name: Vibrio cholerae 2740-80


organism_name: Vibrio cholerae MZO-3


asm_submitter: Laboratoire de Microbiologie (Universite Bourgogne); GENOME Express; UMR Oenologie Ampelologie (Universite Bordeaux 2)

infraspecific_name: strain=ATCC BAA-1163

organism_name: Oenococcus oeni ATCC BAA-1163


asm_submitter: J. Craig Venter Institute

organism_name: Methylophilales bacterium HTCC2181


asm_submitter: Gordon and Betty Moore Foundation Microbial Genome Sequencing Project

organism_name: Alteromonadales bacterium TW-7


asm_submitter: The Gordon and Betty Moore Foundation Marine Microbiology Initiative

organism_name: marine gamma proteobacterium HTCC2143


organism_name: marine gamma proteobacterium HTCC2080


asm_submitter: US DOE Joint Genome Institute (JGI-PGF)

organism_name: Heyndrickxia coagulans 36D1


organism_name: Shewanella putrefaciens 200


asm_submitter: Washington University Genome Sequencing Center

infraspecific_name: strain=ATCC 29799

organism_name: Pseudoflavonifractor capillosus ATCC 29799


asm_submitter: Diversa Corporation

excluded_from_refseq: derived from environmental source; genus undefined

organism_name: candidate division TM7 genomosp. GTL1


organism_name: Bacillus sp. B14905


organism_name: Flavobacteria bacterium BAL38


organism_name: Rhodobacteraceae bacterium HTCC2150


asm_submitter: TIGR

organism_name: Coxiella burnetii Q321


asm_submitter: Beijing Genomics Institute

organism_name: Mycobacterium tuberculosis H37Ra


infraspecific_name: strain=ATCC 27819

organism_name: Ureaplasma urealyticum serovar 7 str. ATCC 27819


infraspecific_name: strain=ATCC 33175

organism_name: Ureaplasma urealyticum serovar 9 str. ATCC 33175


asm_submitter: Center for Genomic Sciences, Allegheny-Singer Research Institute

organism_name: Haemophilus influenzae 22.1-21


organism_name: Haemophilus influenzae R3021


organism_name: Haemophilus influenzae 3655


infraspecific_name: strain=PittHH

organism_name: Haemophilus influenzae PittHH


infraspecific_name: strain=PittII

organism_name: Haemophilus influenzae PittII


organism_name: Haemophilus influenzae 22.4-21


asm_submitter: National Facility for Marine Cyanobacteria

excluded_from_refseq: contaminated; fragmented assembly; partial

genome_rep: Partial

infraspecific_name: strain=BDU 20041

organism_name: Leptolyngbya valderiana BDU 20041


asm_submitter: Moore Foundation

organism_name: Vibrionales bacterium SWAT-3


organism_name: Streptococcus pneumoniae SP3-BS71


organism_name: Streptococcus pneumoniae SP6-BS73


organism_name: Streptococcus pneumoniae SP9-BS68


organism_name: Streptococcus pneumoniae SP11-BS70


organism_name: Streptococcus pneumoniae SP14-BS69


organism_name: Streptococcus pneumoniae SP18-BS74


organism_name: Streptococcus pneumoniae SP19-BS75


organism_name: Streptococcus pneumoniae SP23-BS72


organism_name: Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188


asm_submitter: Unite des Rickettsies, CNRS

organism_name: Francisella tularensis subsp. holarctica URFT1


organism_name: Burkholderia pseudomallei DM98


organism_name: Burkholderia pseudomallei 14


organism_name: Burkholderia pseudomallei 91


organism_name: Burkholderia pseudomallei 9


organism_name: Burkholderia pseudomallei B7210


organism_name: Burkholderia pseudomallei 7894


organism_name: Burkholderia pseudomallei NCTC 13177


asm_submitter: US DOE Joint Genome Institute

excluded_from_refseq: contaminated; derived from metagenome; derived from single cell; fragmented assembly; genus undefined

organism_name: candidate division TM7 single-cell isolate TM7a


organism_name: candidate division TM7 single-cell isolate TM7b


excluded_from_refseq: derived from metagenome; derived from single cell; genus undefined

organism_name: candidate division TM7 single-cell isolate TM7c


asm_submitter: Center for Genomic Sciences

excluded_from_refseq: fragmented assembly

isolate: SS

organism_name: Beggiatoa sp. SS


excluded_from_refseq: contaminated; fragmented assembly

isolate: PS

organism_name: Beggiatoa sp. PS


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: unidentified eubacterium SCB49


organism_name: Borreliella afzelii ACA-1


organism_name: Borreliella valaisiana VS116


infraspecific_name: strain=ATCC BAA-548

organism_name: Victivallis vadensis ATCC BAA-548


organism_name: Bacillus cereus H3081.97


excluded_from_refseq: unverified source organism

infraspecific_name: strain=Eklund

organism_name: Clostridium botulinum C str. Eklund


organism_name: Geminisphaera colitermitum TAV2


excluded_from_refseq: fragmented assembly; partial

organism_name: Haemophilus influenzae HK1212


asm_submitter: TIGR/JCVI

organism_name: Salmonella enterica subsp. enterica serovar Virchow str. SL491


organism_name: Streptococcus pneumoniae CDC1087-00


organism_name: Borreliella burgdorferi 118a


organism_name: Borreliella burgdorferi 72a


excluded_from_refseq: contaminated; not used as type

infraspecific_name: strain=UQM 2246

organism_name: Gemmata obscuriglobus UQM 2246


asm_submitter: Naval Medical Research Center

organism_name: Campylobacter jejuni subsp. jejuni CG8421


excluded_from_refseq: genus undefined

organism_name: alpha proteobacterium BAL199


organism_name: Flavobacteriales bacterium ALC-1


excluded_from_refseq: annotation fails completeness check

organism_name: Escherichia coli O157:H7 str. EC4113


organism_name: Escherichia coli O157:H7 str. EC4501


asm_submitter: Washington University Medical School

organism_name: Helicobacter pylori HPKX_438_AG0C1


organism_name: Helicobacter pylori HPKX_438_CA4C1


asm_submitter: J. Craig Venter Institute

excluded_from_refseq: genome length too large

organism_name: Borreliella burgdorferi 80a


infraspecific_name: strain=PBr

organism_name: Borreliella garinii PBr


excluded_from_refseq: genome length too small

organism_name: Borreliella burgdorferi 29805


organism_name: Borreliella burgdorferi CA-11.2A


organism_name: Borreliella burgdorferi 64b


excluded_from_refseq: unverified source organism; partial

organism_name: Campylobacter jejuni subsp. jejuni BH-01-0142


asm_submitter: Iowa State University

organism_name: Glaesserella parasuis 29755


asm_submitter: Washington State University

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

infraspecific_name: strain=Mississippi

organism_name: Anaplasma marginale str. Mississippi


excluded_from_refseq: many frameshifted proteins

infraspecific_name: strain=Virginia

organism_name: Anaplasma marginale str. Virginia


asm_submitter: Fonterra Research Centre

organism_name: Bifidobacterium animalis subsp. lactis HN019


asm_submitter: Baylor College of Medicine

organism_name: Enterococcus faecalis OG1RF


asm_submitter: J Craig Venter Institute

organism_name: Borreliella garinii Far04


asm_submitter: Evolucinary Genomics Group, Universidad Miguel Hernandez

infraspecific_name: strain=ATCC 27126

organism_name: Alteromonas macleodii ATCC 27126


asm_submitter: Centro de Ciencias Genomicas, Universidad Nacional Autonoma de Mexico

infraspecific_name: strain=Kim 5

organism_name: Rhizobium sp. Kim5


excluded_from_refseq: fragmented assembly; genome length too small

infraspecific_name: strain=Brasil 5

organism_name: Rhizobium phaseoli Brasil 5


organism_name: Rhizobium etli 8C-3


organism_name: Rhizobium etli GR56


organism_name: Rhizobium etli bv. mimosae str. IE4771


infraspecific_name: strain=CIAT 894

organism_name: Rhizobium sp. CIAT894


asm_submitter: Vanderbilt University School of Medicine

organism_name: Helicobacter pylori 98-10


organism_name: Helicobacter pylori B128


asm_submitter: US DOE Joint Genome Institute (JGI-PGF)

infraspecific_name: strain=DSM 11551

organism_name: Halogeometricum borinquense DSM 11551


organism_name: Acetivibrio thermocellus JW20


organism_name: Geobacillus thermodenitrificans


organism_name: Thermus aquaticus Y51MC23


organism_name: Flavobacteria bacterium MS024-2A


organism_name: Flavobacteria bacterium MS024-3C


asm_submitter: University of Wisconsin

organism_name: Pectobacterium carotovorum subsp. carotovorum WPP14


organism_name: Lacticaseibacillus rhamnosus HN001


asm_submitter: Center for Genomic Sciences, Allegheny-Singer Research Institute

organism_name: Streptococcus pneumoniae SP-BS293


excluded_from_refseq: contaminated

organism_name: Burkholderia sp. H160


asm_submitter: McGill University

infraspecific_name: strain=CCRI 1974M2

organism_name: Streptococcus pneumoniae CCRI 1974M2


asm_submitter: Washington University Genome Sequencing Center

infraspecific_name: strain=DSM 15897

organism_name: Catenibacterium mitsuokai DSM 15897


organism_name: Alicyclobacillus acidocaldarius LAA1


infraspecific_name: strain=ATCC 23970

organism_name: Neisseria lactamica ATCC 23970


infraspecific_name: strain=DO

organism_name: Enterococcus faecium DO


asm_name: CFV v1 Assembly

asm_submitter: IIB-UNSAM

organism_name: Campylobacter fetus subsp. venerealis str. Azul-94


organism_name: Geobacillus sp. Y412MC52


organism_name: Rhodococcus erythropolis SK121


asm_submitter: The North American Consortium for Genomics of Fibrolytic Ruminal Bacteria

organism_name: Ruminococcus flavefaciens FD-1


asm_submitter: Aalborg University

organism_name: Pseudomonas sp. UK4


asm_submitter: UMIGS

infraspecific_name: strain=Weiss

organism_name: Chlamydia muridarum str. Weiss


organism_name: Nitrosomonas sp. AL212


organism_name: Geobacter sp. M18


infraspecific_name: strain=CB 48

organism_name: Asticcacaulis excentricus CB 48


infraspecific_name: strain=ATCC 10988

organism_name: Zymomonas mobilis subsp. mobilis ATCC 10988


asm_submitter: J. Craig Venter Institute

organism_name: Neisseria flavescens SK114


organism_name: Thermoanaerobacter brockii subsp. finnii Ako-1


asm_submitter: Broad Institute

organism_name: Actinomyces viscosus C505


asm_submitter: Los Alamos National Laboratory

organism_name: Clostridium botulinum D str. 1873


excluded_from_refseq: mixed culture


asm_submitter: University of Applied Sciences of Western Switzerland

infraspecific_name: strain=Paraca

organism_name: Limnospira platensis str. Paraca


asm_submitter: Center for Bioinformatics and Genome Biology

infraspecific_name: strain=ATCC 51756

organism_name: Acidithiobacillus caldus ATCC 51756


infraspecific_name: strain=DSM 2360

organism_name: Acetivibrio thermocellus DSM 2360


organism_name: Thermoanaerobacter sp. X561


infraspecific_name: strain=DSM 2782

organism_name: Ruminiclostridium papyrosolvens DSM 2782


organism_name: Thermoanaerobacter ethanolicus CCSD1


asm_submitter: FLI Jena

excluded_from_refseq: contaminated; unverified source organism

organism_name: Raphidiopsis brookii D9


excluded_from_refseq: unverified source organism; genome length too small

organism_name: Enhydrobacter aerosaccus SK60


organism_name: Pantoea sp. At-9b


organism_name: Mesorhizobium opportunistum WSM2075


asm_submitter: LNCC/UFRJ/CBS

organism_name: Vibrio alginolyticus 40B


infraspecific_name: strain=ATCC 33331

organism_name: Streptomyces pratensis ATCC 33331


organism_name: Enterococcus faecium D344SRF


asm_submitter: TIGR

organism_name: Mycobacterium tuberculosis 210


asm_submitter: Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)

organism_name: Vibrio cholerae RC27


infraspecific_name: strain=INDRE 91/1

organism_name: Vibrio cholerae INDRE 91/1


infraspecific_name: strain=CT 5369-93

organism_name: Vibrio cholerae CT 5369-93


asm_submitter: Center for the Study of Biological Complexity, Virginia Commonwealth University

infraspecific_name: strain=AMD

organism_name: Gardnerella vaginalis AMD


organism_name: Gardnerella vaginalis 5-1


organism_name: Escherichia coli H736


organism_name: Escherichia coli M605


organism_name: Escherichia coli M718


organism_name: Escherichia coli TA206


organism_name: Escherichia coli TA143


organism_name: Escherichia coli TA271


organism_name: Escherichia coli TA280


organism_name: Escherichia coli H591


organism_name: Escherichia coli H299


infraspecific_name: strain=ATCC 43768

organism_name: Neisseria polysaccharea ATCC 43768


infraspecific_name: strain=ATCC 29315

organism_name: Neisseria elongata subsp. glycolytica ATCC 29315


asm_submitter: School of Biosciences, University of Birmingham

excluded_from_refseq: fragmented assembly

organism_name: Escherichia coli OP50


asm_submitter: Georg-August Universität Göttingen

organism_name: Serratia plymuthica 4Rx13


asm_submitter: US DOE Joint Genome Institute (JGI-PGF)

infraspecific_name: strain=ATCC 19860

organism_name: Paracidovorax avenae ATCC 19860


asm_submitter: SCK-CEN, Belgian Nuclear Research Center/Genoscope

infraspecific_name: strain=PCC 8005

organism_name: Limnospira indica PCC 8005


organism_name: Pseudodesulfovibrio aespoeensis Aspo-2


asm_submitter: US DOE Joint Genome Institute

organism_name: Burkholderia sp. CCGE1001


asm_submitter: JGI-PGF


organism_name: Lactobacillus crispatus SJ-3C-US


organism_name: Lactobacillus gasseri SJ-9E-US


organism_name: Ruminococcaceae bacterium D16


organism_name: Lactobacillus gasseri SV-16A-US


organism_name: Lactobacillus jensenii 208-1


organism_name: Streptomyces griseus XylebKG-1


infraspecific_name: strain=ACTE

organism_name: Streptomyces sp. SirexAA-E


organism_name: Solidesulfovibrio carbinoliphilus subsp. oakridgensis


infraspecific_name: strain=DSM 2522

organism_name: Evansella cellulosilytica DSM 2522


organism_name: Rhodopseudomonas palustris DX-1


asm_submitter: University of Wuerzburg

excluded_from_refseq: derived from environmental source; genus undefined

organism_name: Candidatus Poribacteria bacterium WGA-A3


asm_submitter: University of Arizona

organism_name: Bacillus cereus SJ1


asm_submitter: JCVI

organism_name: Lactobacillus gasseri 224-1


asm_submitter: Virginia Tech

excluded_from_refseq: unverified source organism

organism_name: Pseudomonas syringae pv. syringae 642


asm_submitter: Center for Biotechnology, Bielefeld University

infraspecific_name: strain=DSM 45100

organism_name: Corynebacterium resistens DSM 45100


organism_name: Candidatus Frankia meridionalis


organism_name: Desulfurispirillum indicum S5


organism_name: Micromonospora sp. L5


asm_submitter: Broad Institute

organism_name: Mycobacterium tuberculosis SUMu003


organism_name: Mycobacterium tuberculosis SUMu004


organism_name: Mycobacterium tuberculosis SUMu005


organism_name: Mycobacterium tuberculosis SUMu006


organism_name: Mycobacterium tuberculosis SUMu007


organism_name: Mycobacterium tuberculosis SUMu008


organism_name: Mycobacterium tuberculosis SUMu009


organism_name: Mycobacterium tuberculosis SUMu010


organism_name: Mycobacterium tuberculosis SUMu011


organism_name: Mycobacterium tuberculosis SUMu012


organism_name: Ethanoligenens harbinense YUAN-3


organism_name: Lysinibacillus fusiformis ZC1


organism_name: Hominimerdicola alba 8


organism_name: Burkholderia sp. Ch1-1


asm_submitter: Huazhong Agricultural University

organism_name: Actinobacillus pleuropneumoniae serovar 1 str. 4074


asm_submitter: TGAC

organism_name: Pseudonocardia sp. P1


asm_submitter: National Bioforensic Analysis Center

organism_name: Escherichia coli O157:H7 str. EC4192


organism_name: Escherichia coli O157:H7 str. EC4084


organism_name: Escherichia coli O157:H7 str. EC4205


organism_name: Methylosinus trichosporium OB3b


infraspecific_name: strain=DSM 5427

organism_name: Cellulosilyticum lentocellum DSM 5427


organism_name: Shewanella baltica OS678


asm_submitter: Baylor College of Medicine

organism_name: Helicobacter pylori 35A


organism_name: Granulicella mallensis MP5ACTX8


organism_name: Granulicella tundricola MP5ACTX9


infraspecific_name: strain=BC

organism_name: Alicycliphilus denitrificans BC


asm_submitter: Purdue University

infraspecific_name: strain=Illinois

organism_name: Mycoplasma suis str. Illinois


asm_submitter: Gordon and Betty Moore Foundation Marine Microbiology Initiative

organism_name: Synechococcus sp. CB0101


asm_submitter: University of Massachusetts

organism_name: delta proteobacterium NaphS2


asm_submitter: Center of Biotechnology, Bielefeld University

infraspecific_name: strain=DSM 44702

organism_name: Corynebacterium variabile DSM 44702


asm_submitter: US DOE Joint Genome Institute (JGI-PGF)

organism_name: Shewanella baltica OS183


organism_name: Methanothermococcus okinawensis IH1


organism_name: Acetivibrio cellulolyticus CD2


organism_name: Hominimerdicola alba 7 = DSM 20455


asm_submitter: Gujarat Genomics Initiative

organism_name: Acidithiobacillus sp. GGI-221


asm_submitter: The Genome Analysis Centre

excluded_from_refseq: contaminated; unverified source organism; genome length too large

organism_name: Pseudonocardia sp. P2


asm_submitter: Yale University

excluded_from_refseq: unverified source organism; annotation fails completeness check; many frameshifted proteins

organism_name: Streptococcus pneumoniae 06-01-003MEF


organism_name: Terriglobus saanensis SP1PR4


asm_submitter: J. Craig Venter Institute

organism_name: Streptococcus parasanguinis F0405


organism_name: Streptococcus vestibularis F0396


asm_submitter: Mie University

excluded_from_refseq: low quality sequence; not used as type

organism_name: Clostridium cellulovorans 743B


asm_submitter: School of Pharmacy, Nihon University

organism_name: Plautia stali symbiont


excluded_from_refseq: missing strain identifier


asm_submitter: Pathogen Sequencing Unit, Wellcome Trust Sanger Institute

organism_name: Salmonella enterica subsp. enterica serovar Typhi str. 404ty


organism_name: Salmonella enterica subsp. enterica serovar Typhi str. E00-7866


organism_name: Salmonella enterica subsp. enterica serovar Typhi str. E01-6750


organism_name: Salmonella enterica subsp. enterica serovar Typhi str. E02-1180


organism_name: Salmonella enterica subsp. enterica serovar Typhi str. E98-0664


organism_name: Salmonella enterica subsp. enterica serovar Typhi str. E98-2068


organism_name: Salmonella enterica subsp. enterica serovar Typhi str. J185


excluded_from_refseq: abnormal gene to sequence ratio; fragmented assembly; many frameshifted proteins

organism_name: Salmonella enterica subsp. enterica serovar Typhi str. M223


organism_name: Salmonella enterica subsp. enterica serovar Typhi str. AG3


organism_name: Salmonella enterica subsp. enterica serovar Typhi str. E98-3139


asm_submitter: Genomic Research Laboratory, Division of Infectious Diseases, Geneva University Hospitals

infraspecific_name: strain=CF-Marseille

organism_name: Staphylococcus aureus subsp. aureus str. CF-Marseille


asm_submitter: Wellcome Trust Sanger Institute

organism_name: Streptococcus pneumoniae SPNA45


asm_submitter: The Wellcome Trust Sanger Institute

organism_name: Streptococcus pneumoniae SPN061370


asm_submitter: ERIC

organism_name: Yersinia pestis CA88-4125


organism_name: Borreliella burgdorferi 156a


organism_name: Borreliella burgdorferi Bol26


asm_submitter: TIGR

excluded_from_refseq: low quality sequence

infraspecific_name: strain=W

organism_name: Bacillus cereus W


organism_name: Bacillus cereus NVH0597-99


organism_name: Bacillus cereus 03BB108


infraspecific_name: strain=Tsiankovskii-I

organism_name: Bacillus anthracis str. Tsiankovskii-I


organism_name: Borreliella burgdorferi 94a


excluded_from_refseq: annotation fails completeness check

organism_name: Escherichia coli O157:H7 str. EC4206


organism_name: Borreliella burgdorferi WI91-23


organism_name: [Borrelia] finlandensis


organism_name: Borreliella spielmanii A14S


asm_submitter: J Craig Venter Institute

organism_name: Vibrio parahaemolyticus Peru-466


organism_name: Vibrio parahaemolyticus AQ4037


asm_submitter: Virginia Bioinformatics Institute (VBI)

infraspecific_name: strain=Cudo

organism_name: Brucella ceti str. Cudo


asm_submitter: MSC

organism_name: Vibrio parahaemolyticus K5030


asm_submitter: Los Alamos National Laboratory

excluded_from_refseq: genome length too small

organism_name: Burkholderia pseudomallei MSHR346


asm_submitter: LNCC/UFRJ/CBS

organism_name: Vibrio harveyi 1DA3


excluded_from_refseq: many frameshifted proteins

infraspecific_name: strain=KIM D27

organism_name: Yersinia pestis KIM D27


asm_submitter: Helsinki University, Finland

infraspecific_name: strain=GRL 1112

organism_name: Lactobacillus amylovorus GRL 1112


asm_submitter: Integrated Genomics

infraspecific_name: strain=ATCC 49256

organism_name: Fusobacterium vincentii ATCC 49256


asm_submitter: University of York

organism_name: Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)


excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)


asm_submitter: J. Craig Venter Institute

organism_name: Alistipes sp. HGB5


asm_submitter: US DOE Joint Genome Institute (JGI-PGF)

excluded_from_refseq: genome length too large

organism_name: [Eubacterium] cellulosolvens 6


infraspecific_name: strain=DSM 13965

organism_name: Thermaerobacter subterraneus DSM 13965


asm_submitter: University of Kiel, Germany and Zhejiang Universtiy, China.

organism_name: Bacillus subtilis gtP20b


asm_submitter: Life Technologies Corporation

infraspecific_name: strain=FSL F2-208

organism_name: Listeria monocytogenes FSL F2-208


infraspecific_name: strain=FSL S4-120

organism_name: Listeria marthii FSL S4-120


infraspecific_name: strain=FSL S4-378

organism_name: Listeria innocua FSL S4-378


infraspecific_name: strain=FSL F6-596

organism_name: Listeria ivanovii FSL F6-596


infraspecific_name: strain=FSL S4-171

organism_name: Listeria seeligeri FSL S4-171


asm_submitter: Dept. of  Diagnosis for Infectious Disease

organism_name: Campylobacter jejuni subsp. jejuni ICDCCJ07001


asm_submitter: Institute for Genome Sciences

organism_name: Acinetobacter baumannii UMB003


asm_submitter: Faculty of Life Sciences, Department of Food Science, University of Copenhagen

organism_name: Campylobacter jejuni subsp. jejuni DFVF1099


organism_name: Campylobacter jejuni subsp. jejuni 305


organism_name: Campylobacter jejuni subsp. jejuni 327


asm_submitter: Korea Research Institute of Bioscience and Biotechnology

excluded_from_refseq: genome length too large; not used as type

infraspecific_name: strain=KCTC 3652

organism_name: Leuconostoc pseudomesenteroides KCTC 3652


excluded_from_refseq: fragmented assembly; not used as type

infraspecific_name: strain=KCTC 3528

organism_name: Leuconostoc lactis KCTC 3528 = DSM 20202


asm_submitter: Baylor College of Medicine

infraspecific_name: strain=ATCC 33269

organism_name: Hoylesella oralis ATCC 33269


asm_submitter: Broad Institute

excluded_from_refseq: genus undefined

organism_name: Lachnospiraceae bacterium 5_1_63FAA


organism_name: Lachnospiraceae bacterium 8_1_57FAA


organism_name: Enterobacteriaceae bacterium 9_2_54FAA


organism_name: Bilophila wadsworthia 3_1_6


infraspecific_name: strain=ATCC BAA-974

organism_name: Segniliparus rugosus ATCC BAA-974


asm_submitter: Centers for Disease Control, Taiwan

organism_name: Neisseria gonorrhoeae TCDC-NG08107


asm_submitter: Josephine Bay Paul Center for Comparative Molecular Biology and Evolution, Marine Biological Laboratory

infraspecific_name: strain=BVAF

organism_name: Candidatus Blochmanniella vafra str. BVAF


organism_name: Bacteroides sp. 3_1_40A


organism_name: Bacillus sp. 2_A_57_CT2


asm_submitter: Universidade Federal do Rio de Janeiro

organism_name: Dietzia cinnamea P4


asm_submitter: Case Western Reserve University

excluded_from_refseq: fragmented assembly

organism_name: Acinetobacter baumannii A118


asm_submitter: Macquarie University

organism_name: Acinetobacter baumannii D1279779


excluded_from_refseq: contaminated

organism_name: Actinomyces sp. oral taxon 178 str. F0338


asm_submitter: Washington University Genome Sequencing Center

organism_name: Solobacterium moorei F0204


asm_submitter: Purdue University

excluded_from_refseq: Automated annotation fails to meet RefSeq quality standards

organism_name: Mycoplasma haemofelis Ohio2


asm_submitter: Centre of Bioinformatics, Tianjin University, Tianjin 300072, China

infraspecific_name: strain=MDR-TJ

organism_name: Acinetobacter baumannii MDR-TJ


asm_submitter: FDA

organism_name: Escherichia coli O157:H- str. 493-89


infraspecific_name: strain=H 2687

organism_name: Escherichia coli O157:H- str. H 2687


asm_submitter: University of British Columbia

organism_name: Paenibacillus larvae subsp. larvae B-3650


asm_submitter: Virginia Bioinformatics Institute

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786


asm_submitter: JCVI

organism_name: Streptococcus criceti HS-6


infraspecific_name: strain=NCTC 11558

organism_name: Streptococcus macacae NCTC 11558


organism_name: Streptococcus ictaluri 707-05


organism_name: Streptococcus urinalis 2285-97


asm_submitter: US DOE Joint Genome Institute (JGI-PGF)

infraspecific_name: strain=ATCC 49242

organism_name: Methylocystis sp. ATCC 49242


asm_submitter: Cornell University

infraspecific_name: strain=ATCC 27957

organism_name: Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957


organism_name: Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675


infraspecific_name: strain=ATCC 12394

organism_name: Streptococcus dysgalactiae subsp. equisimilis ATCC 12394


asm_submitter: Institute for Genome Sciences

organism_name: Escherichia coli EPECa14


organism_name: Shigella sonnei 53G


organism_name: Escherichia coli LT-68


organism_name: Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20


organism_name: Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055


asm_submitter: US DOE Joint Genome Institute

organism_name: Pseudodesulfovibrio mercurii


asm_submitter: Geneva University Hospitals

organism_name: Staphylococcus aureus O11


organism_name: Staphylococcus aureus O46


asm_submitter: University of Birmingham

organism_name: Acinetobacter baumannii 4190


asm_submitter: Taiwan Centers for Disease Control

excluded_from_refseq: missing tRNA genes

organism_name: Acinetobacter baumannii TCDC-AB0715


infraspecific_name: strain=DSM 574

organism_name: Desulfotomaculum nigrificans DSM 574


asm_submitter: Washington University in St.Louis

organism_name: Methanobrevibacter smithii TS145B


organism_name: Methanobrevibacter smithii TS146A


organism_name: Methanobrevibacter smithii TS146B


organism_name: Methanobrevibacter smithii TS146C


organism_name: Methanobrevibacter smithii TS147C


excluded_from_refseq: unverified source organism; many frameshifted proteins

organism_name: Methanobrevibacter smithii TS95A


excluded_from_refseq: fragmented assembly; partial

infraspecific_name: strain=North American

organism_name: Pasteuria nishizawae str. North American


asm_submitter: ICCBS

organism_name: Pseudomonas sp. TJI-51


asm_submitter: Huazhong Agricultural University

excluded_from_refseq: unverified source organism

organism_name: Bacillus thuringiensis serovar finitimus YBT-020


organism_name: Methylobacter tundripaludum SV96


asm_submitter: Broad Institute

organism_name: Escherichia coli H120


organism_name: Escherichia coli TA007


asm_submitter: Chinese National HGC

organism_name: Lactobacillus delbrueckii subsp. bulgaricus 2038


asm_submitter: University of Maryland School of Medicine

organism_name: Neisseria meningitidis OX99.30304


organism_name: Neisseria meningitidis 961-5945


asm_submitter: University of Kiel, Germany and Zhejiang Universtiy, China.

organism_name: Streptomyces sp. PP-C42


organism_name: Lachnospiraceae bacterium 6_1_37FAA


asm_submitter: H.E.J, Research Institute of Chemistry, International Center for Chemical and Biological Sciences, University of Karachi, Karachi, Pakistan

organism_name: Burkholderia sp. TJI49


asm_submitter: University of Florida

organism_name: Xanthomonas perforans 91-118


excluded_from_refseq: misassembled; not used as type

infraspecific_name: strain=JW 200

organism_name: Thermoanaerobacter ethanolicus JW 200


asm_submitter: Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences

organism_name: Mycoplasma capricolum subsp. capripneumoniae M1601


excluded_from_refseq: derived from environmental source; genus undefined

organism_name: Nocardioidaceae bacterium Broad-1


asm_submitter: University of California Berkeley

excluded_from_refseq: derived from metagenome; partial

organism_name: Candidatus Parvarchaeum acidiphilum ARMAN-4_'5-way FS'


organism_name: Candidatus Parvarchaeum acidophilus ARMAN-5_'5-way FS'


organism_name: Sphingobacterium sp. 21


asm_submitter: Center for Genomic Sciences

organism_name: Moraxella catarrhalis 12P80B1


organism_name: Mycobacterium tuberculosis W-148


asm_submitter: US DOE Joint Genome Institute (JGI-PGF)

organism_name: Caldicellulosiruptor acetigenus 6A


asm_submitter: The University of Tokyo

infraspecific_name: strain=NBRC 14818

organism_name: Acetobacter aceti NBRC 14818


asm_submitter: RIVM

organism_name: Bordetella pertussis B1917


organism_name: Bordetella pertussis B1920


asm_submitter: Cornell University

organism_name: Clostridioides difficile 6407


organism_name: Clostridioides difficile 6466


excluded_from_refseq: annotation fails completeness check

organism_name: Clostridioides difficile 6503


excluded_from_refseq: abnormal gene to sequence ratio; annotation fails completeness check; many frameshifted proteins

organism_name: Clostridioides difficile 6534


asm_submitter: University of Maryland, College Park

excluded_from_refseq: many frameshifted proteins

organism_name: Neisseria sicca DS1


excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Neisseria meningitidis NS44


asm_submitter: Virginia Bioinformatics Institute

infraspecific_name: strain=ATCC 9905

organism_name: Shigella boydii ATCC 9905


infraspecific_name: strain=CDC 796-83

organism_name: Shigella flexneri CDC 796-83


asm_submitter: Microbial Genome Research Center, CASPMI, IM-CAS

infraspecific_name: strain=China

organism_name: Mycobacterium tuberculosis variant bovis BCG str. China


infraspecific_name: strain=Denmark 1331

organism_name: Mycobacterium tuberculosis variant bovis BCG str. ATCC 35733


infraspecific_name: strain=Russia

organism_name: Mycobacterium tuberculosis variant bovis BCG str. ATCC 35740


infraspecific_name: strain=ATCC 35743

organism_name: Mycobacterium tuberculosis variant bovis BCG str. ATCC 35743


infraspecific_name: strain=Tice


asm_submitter: CMPG, Katholieke Universiteit,  Leuven

organism_name: Rhizobium etli CNPAF512


asm_submitter: E. coli Reference Center

organism_name: Escherichia coli 97.0264


organism_name: Escherichia coli 9.1649


asm_submitter: WUGSC

organism_name: Cutibacterium acnes HL096PA3


asm_submitter: Institute for Genome Sciences

organism_name: Streptococcus pneumoniae GA04375


asm_submitter: Baylor College of Medicine

excluded_from_refseq: contaminated; not used as type

infraspecific_name: strain=ATCC 11116

organism_name: Haemophilus aegyptius ATCC 11116


asm_submitter: Rede Paraense de Genômica e Proteômica

organism_name: Vibrio cholerae LMA3984-4


asm_submitter: Division of Biology and Ocean Sciences,Inha University, College of Natural Sciences Inha University

organism_name: Oxalobacteraceae bacterium IMCC9480


asm_submitter: SMC College of Dairy Science, Anand Agricultural University, Anand

infraspecific_name: strain=MTCC 5463

organism_name: Lactobacillus helveticus MTCC 5463


infraspecific_name: strain=MTCC 5462

organism_name: Lacticaseibacillus rhamnosus MTCC 5462


asm_submitter: FDA

organism_name: Listeria monocytogenes J1816


organism_name: Listeria monocytogenes J1-220


asm_submitter: DOE Joint Genome Institute

organism_name: Rhodopseudomonas palustris CGA009


asm_submitter: Sanger Institute

organism_name: Mycobacterium tuberculosis variant bovis AF2122/97


asm_submitter: School of Veterinary Medicine


infraspecific_name: strain=Fusaro

organism_name: Methanosarcina barkeri str. Fusaro


asm_submitter: Genoscope

infraspecific_name: strain=Orsay

organism_name: Pyrococcus abyssi GE5


organism_name: Mycobacterium tuberculosis H37Rv


asm_submitter: US DOE Joint Genome Institute

organism_name: Pseudonocardia benzenivorans CB1190


asm_submitter: Genoscope / CEA

excluded_from_refseq: missing strain identifier

organism_name: Nitrospira defluvii


asm_submitter: Max-Planck-Institute of Biochemistry

infraspecific_name: strain=type strain: DSM 2581

organism_name: Halomonas elongata DSM 2581


asm_submitter: CIRAD UMR

excluded_from_refseq: genome length too small

organism_name: Ralstonia solanacearum CFBP2957


asm_submitter: Max Planck Society

excluded_from_refseq: genus undefined

organism_name: gamma proteobacterium HdN1


infraspecific_name: strain=A

organism_name: Cenarchaeum symbiosum A


asm_submitter: Centre for Genomic Research, Institute of Integrative Biology, University of Liverpool

infraspecific_name: strain=Langford 1

organism_name: Mycoplasma haemofelis str. Langford 1


asm_submitter: Wageningen Centre for Food Sciences

organism_name: Lactiplantibacillus plantarum WCFS1


organism_name: Cupriavidus pinatubonensis JMP134


asm_submitter: University of Connecticut

organism_name: Leisingera sp. ANG1


asm_submitter: Institute for Genome Sciences, University Of Maryland School of Medicine

organism_name: Chlamydia psittaci Cal10


asm_submitter: Broad Institute

organism_name: Gemella sanguinis M325


asm_submitter: National Veterinary Institute (SVA), Sweden

organism_name: Clostridium botulinum V891


asm_submitter: Stanford University

excluded_from_refseq: derived from single cell

organism_name: Candidatus Nitrosarchaeum limnium SFB1


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Leptospirillum rubarum


asm_submitter: Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

organism_name: Enterococcus faecalis TX1467


asm_submitter: J. Craig Venter Institute

organism_name: Staphylococcus aureus subsp. aureus 21172


asm_submitter: Animal Health Department, Complutense University of Madrid

organism_name: Lactococcus garvieae 21881


asm_submitter: Georgia Institute of Technology, School of Civil and Environmental Engineering

organism_name: Escherichia sp. TW11588


asm_submitter: Tianjin University of Science & Technology

organism_name: Gluconacetobacter sp. SXCC-1


asm_submitter: Wellcome Trust Sanger Institute

infraspecific_name: strain=Ballerup 7851

organism_name: Citrobacter freundii str. ballerup 7851/39


organism_name: Wolbachia endosymbiont of Culex pipiens molestus


organism_name: Lachnospiraceae bacterium 2_1_46FAA


organism_name: Lachnospiraceae bacterium 3_1_46FAA


organism_name: Lachnospiraceae bacterium 6_1_63FAA


organism_name: Lachnospiraceae bacterium 9_1_43BFAA


organism_name: Lachnospiraceae oral taxon 107 str. F0167


asm_submitter: Inha university

organism_name: gamma proteobacterium IMCC1989


asm_submitter: Microbial Genome Research Center, CAS Key laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences

organism_name: Brucella melitensis bv. 1 str. M5


organism_name: Brucella melitensis bv. 1 str. M28-12


organism_name: Brucella melitensis bv. 1 str. M111


organism_name: Brucella suis bv. 1 str. S2


asm_submitter: Keio University

organism_name: Bacillus subtilis subsp. natto BEST195


asm_submitter: MetaHIT

organism_name: Butyrivibrio fibrisolvens 16/4


excluded_from_refseq: missing rRNA genes

organism_name: Ruminococcus bromii L2-63


excluded_from_refseq: genus undefined; missing rRNA genes

organism_name: butyrate-producing bacterium SS3/4


organism_name: [Eubacterium] siraeum 70/3


excluded_from_refseq: unverified source organism; many frameshifted proteins; missing rRNA genes

organism_name: Megamonas hypermegale ART12/1


organism_name: Enterococcus faecalis


excluded_from_refseq: derived from metagenome

organism_name: Cenarchaeum symbiosum B


asm_submitter: Universidad Complutense de Madrid

infraspecific_name: strain=CECT 5716

organism_name: Limosilactobacillus fermentum CECT 5716


asm_submitter: metaHIT

excluded_from_refseq: unverified source organism

organism_name: [Clostridium] cf. saccharolyticum K10


excluded_from_refseq: contaminated

organism_name: Pseudocoprococcus catus GD/7


organism_name: Faecalitalea cylindroides T2-87


excluded_from_refseq: genus undefined; missing tRNA genes

organism_name: [Eubacterium] siraeum V10Sc8a


excluded_from_refseq: fragmented assembly; genus undefined

organism_name: butyrate-producing bacterium SM4/1


excluded_from_refseq: annotation fails completeness check

infraspecific_name: strain=NCTC 9394

organism_name: Enterobacter hormaechei


asm_submitter: The Wellcome Trust Sanger Institute

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344


infraspecific_name: strain=SJ

organism_name: Halobacteriovorax marinus SJ


excluded_from_refseq: many frameshifted proteins

organism_name: Streptococcus pneumoniae SPN033038


asm_submitter: Laboratory of Microbial Gene Technology and Food Microbiology, Department of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences

organism_name: Enterococcus faecalis 62


asm_submitter: Inha University

organism_name: gamma proteobacterium IMCC2047


asm_submitter: Research Institute of Phisical-Chemical Medicine (Moscow)

organism_name: Mycoplasmoides gallisepticum S6


asm_submitter: US DOE Joint Genome Institute (JGI-PGF)

organism_name: Lacinutrix sp. 5H-3-7-4


asm_submitter: Institute for Genome Sciences

organism_name: Streptococcus pneumoniae GA17545


excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Streptococcus pneumoniae GA17570


organism_name: Streptococcus pneumoniae GA41301


organism_name: Shigella boydii 5216-82


asm_submitter: US DOE Joint Genome Institute

organism_name: Glaciecola sp. 4H-3-7+YE-5


organism_name: Streptococcus pneumoniae GA47901


organism_name: Streptococcus pneumoniae GA47368


organism_name: Streptococcus pneumoniae GA41317


organism_name: Ralstonia solanacearum MolK2


asm_submitter: Genoscope


asm_submitter: Institute of Marine Biotechnology

organism_name: Pseudoalteromonas distincta


infraspecific_name: strain=Walvis Bay

organism_name: Desulfocurvibacter africanus subsp. africanus str. Walvis Bay


asm_submitter: University of Minnesota

organism_name: Escherichia coli UMNK88


asm_submitter: Colorado State University

organism_name: Xanthomonas oryzae X11-5A


excluded_from_refseq: RefSeq annotation failed

infraspecific_name: strain=DSM 18011

organism_name: Bacteroides coprosuis DSM 18011


organism_name: Capnocytophaga sp. oral taxon 329 str. F0087


excluded_from_refseq: derived from single cell; genus undefined

infraspecific_name: strain=SCGC AAA001-C10

organism_name: SAR324 cluster bacterium SCGC AAA001-C10


infraspecific_name: strain=SCGC AAA240-J09

organism_name: SAR324 cluster bacterium SCGC AAA240-J09


infraspecific_name: strain=SCGC AAA001-B15

organism_name: gamma proteobacterium SCGC AAA001-B15


infraspecific_name: strain=SCGC AAA007-O20

organism_name: gamma proteobacterium SCGC AAA007-O20


organism_name: Shigella flexneri K-671


organism_name: Shigella flexneri 2747-71


organism_name: Shigella flexneri 4343-70


asm_submitter: Baylor College of Medicine

organism_name: Desmospora sp. 8437


organism_name: Psychrobacter sp. 1501(2011)


organism_name: Shigella flexneri K-218


organism_name: Shigella flexneri K-272


organism_name: Shigella flexneri K-227


organism_name: Shigella flexneri K-304


organism_name: Pseudomonas fulva 12-X


asm_submitter: Gyeongsang National University, Aquatic Biotechnology Center of WCU project

infraspecific_name: strain=KCTC 11537

organism_name: Streptococcus parauberis KCTC 11537


asm_submitter: Animal Health Department, Complutense University of Madrid

organism_name: Lactococcus garvieae 8831


asm_submitter: Moredun Research Institute

infraspecific_name: strain=LLG

organism_name: Chlamydia abortus LLG


asm_submitter: Bumgarner laboratory, Department of Microbiology, University of Washington

organism_name: Methyloversatilis universalis FAM5


organism_name: Microcoleus vaginatus FGP-2


organism_name: Acidithiobacillus ferrivorans SS3


organism_name: Methylomicrobium album BG8


asm_submitter: J. Craig Venter Institute

organism_name: Parvimonas sp. oral taxon 110 str. F0139


organism_name: Propionibacterium sp. 409-HC1


organism_name: Propionibacterium sp. 434-HC2


organism_name: Streptococcus dysgalactiae subsp. equisimilis SK1249


asm_submitter: FDA

excluded_from_refseq: genome length too small; many frameshifted proteins

organism_name: Cronobacter sakazakii E899


asm_submitter: Pathogen Biology Laboratory, Department of Biotechnology, University of Hyderabad

organism_name: Escherichia coli NA114


asm_submitter: Walter Reed Army Institute of Research

organism_name: Acinetobacter baumannii Naval-18


asm_submitter: E. coli Reference Center

organism_name: Escherichia coli 9.0111


asm_submitter: University of Liverpool

organism_name: Aliarcobacter butzleri 7h1h


organism_name: Streptococcus oralis SK255


organism_name: Staphylococcus aureus subsp. aureus 21318


asm_submitter: University of Florida College of Veterinary Medicine

infraspecific_name: strain=Washington Okanogan

organism_name: Anaplasma marginale str. Washington Okanogan


excluded_from_refseq: genome length too large

infraspecific_name: strain=South Idaho

organism_name: Anaplasma marginale str. South Idaho


asm_submitter: Life Technologies

organism_name: Escherichia coli O104:H4 str. LB226692


asm_submitter: University of Minho

organism_name: Pseudomonas aeruginosa HB13


organism_name: Pseudomonas aeruginosa HB15


asm_submitter: King Abdullah University of Science and Technology (KAUS)

organism_name: Halorhabdus tiamatea SARL4B


organism_name: Haloplasma contractile SSD-17B


organism_name: Salinisphaera shabanensis E1L3A


organism_name: Leptospira interrogans serovar Zanoni str. LT2156


organism_name: Leptospira interrogans serovar Grippotyphosa str. LT2186


organism_name: Leptospira interrogans serovar Copenhageni str. LT2050


organism_name: Leptospira interrogans serovar Canicola str. LT1962


excluded_from_refseq: fragmented assembly

organism_name: Leptospira interrogans serovar Australis str. LT2148


organism_name: Leptospira noguchii str. 2006001870


organism_name: Leptospira interrogans str. 2006001854


infraspecific_name: strain=Pomona

organism_name: Leptospira interrogans serovar Pomona str. Pomona


infraspecific_name: strain=Fiocruz LV3738

organism_name: Leptospira interrogans serovar Copenhageni str. Fiocruz LV3738


infraspecific_name: strain=Fiocruz LV3726

organism_name: Leptospira interrogans serovar Copenhageni str. Fiocruz LV3726


infraspecific_name: strain=Fiocruz LV3244

organism_name: Leptospira interrogans serovar Copenhageni str. Fiocruz LV3244


infraspecific_name: strain=Fiocruz LV2805

organism_name: Leptospira interrogans serovar Copenhageni str. Fiocruz LV2805


infraspecific_name: strain=Fiocruz LV2769

organism_name: Leptospira interrogans serovar Copenhageni str. Fiocruz LV2769


infraspecific_name: strain=Fiocruz LV999

organism_name: Leptospira interrogans serovar Copenhageni str. Fiocruz LV999


infraspecific_name: strain=Fiocruz LV251

organism_name: Leptospira interrogans serovar Copenhageni str. Fiocruz LV251


infraspecific_name: strain=Fiocruz LV224

organism_name: Leptospira interrogans serovar Copenhageni str. Fiocruz LV224


organism_name: Leptospira santarosai str. 2000030832


organism_name: Leptospira weilii str. 2006001855


organism_name: Leptospira interrogans str. 2002000626


infraspecific_name: strain=Fiocruz LV130

organism_name: Leptospira interrogans serovar Copenhageni str. Fiocruz LV130


infraspecific_name: strain=Fiocruz LV2755

organism_name: Leptospira interrogans serovar Copenhageni str. Fiocruz LV2755


infraspecific_name: strain=Fiocruz 2756 C1

organism_name: Leptospira interrogans serovar Copenhageni str. Fiocruz LV2756 C1


asm_submitter: Instituto Cavanilles Biodiversidad y Biologia evolutiva.Universidad Valencia

isolate: BCtu

organism_name: Buchnera aphidicola (Cinara tujafilina)


asm_submitter: Center for Environmental Biotechnology

organism_name: Pseudomonas fluorescens HK44


asm_submitter: The Commonwealth Scientific and Industrial Research Organisation (CSIRO)

organism_name: Mycobacterium avium subsp. paratuberculosis Pt154


asm_submitter: Broad Institute

excluded_from_refseq: genus undefined

organism_name: Lachnospiraceae bacterium 1_4_56FAA


organism_name: Lachnospiraceae bacterium 3_1_57FAA_CT1


organism_name: Lachnospiraceae bacterium 5_1_57FAA


organism_name: Lachnospiraceae bacterium 1_1_57FAA


organism_name: Lachnospiraceae bacterium 2_1_58FAA


organism_name: Fusobacterium animalis 21_1A


organism_name: Prochlorococcus marinus bv. HNLC1


organism_name: Prochlorococcus marinus bv. HNLC2


asm_submitter: USDA-ARS-National Animal Disease Center

organism_name: Mycobacterium avium subsp. paratuberculosis S397


asm_submitter: HPA

excluded_from_refseq: abnormal gene to sequence ratio; annotation fails completeness check; many frameshifted proteins

organism_name: Escherichia coli O104:H4 str. H112180541


asm_submitter: University of Montana

excluded_from_refseq: derived from metagenome; missing rRNA genes; missing tRNA genes

infraspecific_name: strain=PCIT

organism_name: Candidatus Tremblaya princeps PCIT


asm_submitter: National Veterinary Institute (SVA), Sweden

infraspecific_name: strain=Stockholm

organism_name: Clostridium botulinum C str. Stockholm


asm_submitter: Department of Laboratory Medicine, General Hospital Of Chinese People's Armed Police Forces

excluded_from_refseq: unverified source organism; annotation fails completeness check

organism_name: Acinetobacter lwoffii WJ10621


asm_submitter: Department of Veterinary Microbiology, College of Veterinary Science and Animal Husbandry, Anand Agricultural University, Anand, Gujarat, India

organism_name: Pasteurella multocida subsp. gallicida str. Anand1_poultry


organism_name: Pasteurella multocida subsp. multocida str. Anand1_goat


asm_submitter: Institute of Biotechnology, Shanxi University, China

excluded_from_refseq: contaminated; fragmented assembly

organism_name: Rhodococcus sp. R04


asm_submitter: Centro de Ciencias Genomicas. U.N.A.M.

organism_name: Sinorhizobium fredii GR64


organism_name: Lactobacillus johnsonii pf01


asm_submitter: Huazhong Agricultural University

organism_name: Escherichia coli PCN033


asm_submitter: Georg-August-University Goettingen

infraspecific_name: strain=LMG 15441

organism_name: Brevibacillus laterosporus LMG 15441


asm_submitter: CSIRO Ecosystem Sciences, Black Mountain Laboratories, Acton, Australia

organism_name: Bradyrhizobiaceae bacterium SG-6C


asm_submitter: School of Municipal and Environmental Engineering, Harbin Institute of Technology

excluded_from_refseq: unverified source organism

organism_name: Agrobacterium tumefaciens F2


asm_submitter: University of Hyderabad

excluded_from_refseq: fragmented assembly; partial

organism_name: Paracoccus denitrificans SD1


asm_submitter: Beijing Institute of Genomics

excluded_from_refseq: missing rRNA genes

infraspecific_name: strain=TPY

organism_name: Sulfobacillus acidophilus TPY


asm_submitter: Bose Institute

organism_name: Advenella kashmirensis WT001


asm_submitter: Bacterial Pathogens in CF group, Sydney Medical School, The University of Sydney Sydney Australia 2006

organism_name: Pseudomonas aeruginosa AES-1R


asm_submitter: University of California, San Diego, Scripps Institution of Oceanography

excluded_from_refseq: derived from metagenome

organism_name: Candidatus Nanosalinarum sp. J07AB56


organism_name: Candidatus Nanosalina sp. J07AB43


asm_submitter: School of Life Science and Biotechnology, Dalian University of Technology

excluded_from_refseq: fragmented assembly; low quality sequence

organism_name: Streptomyces xinghaiensis S187


asm_submitter: Institute for Genome Sciences

organism_name: Vibrio cholerae HCUF01


organism_name: Vibrio cholerae HE39


asm_submitter: PacBio

organism_name: Escherichia coli O104:H4 str. C227-11


asm_submitter: Baylor College of Medicine

excluded_from_refseq: fragmented assembly; not used as type

infraspecific_name: strain=ATCC 51191

organism_name: Fusobacterium animalis ATCC 51191


asm_submitter: University of Valencia

infraspecific_name: strain=PCVAL

organism_name: Candidatus Tremblaya princeps PCVAL


asm_submitter: Life Technologies

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Escherichia coli O104:H4 str. 01-09591


asm_submitter: J. Craig Venter Institute

organism_name: Propionibacterium sp. CC003-HC2


excluded_from_refseq: many frameshifted proteins

organism_name: Streptococcus dysgalactiae subsp. equisimilis SK1250


organism_name: Peptoniphilus sp. oral taxon 375 str. F0436


organism_name: Staphylococcus aureus subsp. aureus 21269


organism_name: Staphylococcus aureus subsp. aureus 21266


organism_name: Staphylococcus aureus subsp. aureus 21259


asm_submitter: BGI

organism_name: Escherichia coli O104:H4 str. TY-2482


asm_submitter: Meningitis and Vaccine Preventable Diseases Branch, Centers for Disease Control and Prevention

organism_name: Haemophilus haemolyticus M19107


excluded_from_refseq: low quality sequence

organism_name: Haemophilus haemolyticus M21621


organism_name: Haemophilus haemolyticus M21639


asm_submitter: Universidad Nacional de Colombia

infraspecific_name: strain=CECT 3035

organism_name: Mycobacterium colombiense CECT 3035


asm_submitter: FIOCRUZ -Fundacao OSwaldo Cruz - Instituto Rene Rachou

infraspecific_name: strain=NCTC 10354

organism_name: Campylobacter fetus subsp. venerealis NCTC 10354


asm_submitter: The Institute of Microbiology, Chinese Academy of Sciences

infraspecific_name: strain=CASD

organism_name: Sporolactobacillus inulinus CASD


asm_submitter: Health Protection Agency

organism_name: Escherichia coli O104:H4 str. H112180540


organism_name: Escherichia coli O104:H4 str. H112180283


organism_name: Streptococcus mitis SK569


asm_submitter: CSIRO

organism_name: Succinivibrionaceae bacterium WG-1


asm_submitter: Zhejiang University

organism_name: Ralstonia solanacearum Y45


organism_name: Streptococcus oralis SK313


organism_name: Streptococcus infantis SK970


infraspecific_name: strain=HK 85

organism_name: Haemophilus pittmaniae HK 85


organism_name: Streptococcus constellatus subsp. pharyngis SK1060 = CCUG 46377


infraspecific_name: strain=X

organism_name: Streptococcus infantis X


organism_name: Klebsiella pneumoniae 1191100241


asm_submitter: DOE Joint Genome Institute

organism_name: Marichromatium purpuratum 984


organism_name: halophilic archaeon DL31


excluded_from_refseq: derived from single cell; genus undefined

infraspecific_name: strain=JCVI-SC AAA005

organism_name: SAR324 cluster bacterium JCVI-SC AAA005


asm_submitter: University of Parma Sacco srl

organism_name: Bifidobacterium animalis subsp. lactis BLC1


organism_name: Escherichia coli 2534-86


organism_name: Escherichia coli 3030-1


organism_name: Escherichia coli STEC_94C


organism_name: Escherichia coli STEC_DG131-3


organism_name: Escherichia coli G58-1


organism_name: Escherichia coli STEC_H.I.8


organism_name: Escherichia coli TX1999


asm_submitter: Broad Institute

organism_name: Erysipelotrichaceae bacterium 2_2_44A


asm_submitter: State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University

organism_name: Pseudomonas putida B6-2


asm_submitter: Asbach

excluded_from_refseq: contaminated

organism_name: Desulfovibrio sp. A2


asm_submitter: State Key Laboratory of Diagnosis and Treatment for Infectious Disease, the First Affiliated Hospital, School of Medicine, Zhejiang University

organism_name: Acinetobacter baumannii MDR-ZJ06


asm_submitter: US Dept of Agriculture, NCAUR-USDA

excluded_from_refseq: fragmented assembly

infraspecific_name: strain=ATCC 31396

organism_name: Streptomyces lysosuperificus ATCC 31396


infraspecific_name: strain=NRRL 3882

organism_name: Streptomyces chartreusis NRRL 3882


asm_submitter: University of Southern California School of Dentistry

infraspecific_name: strain=ATCC 33389

organism_name: Aggregatibacter aphrophilus ATCC 33389


asm_submitter: School of Bioscience and Bioengineering, South China University of Technology

organism_name: Escherichia coli XH140A


organism_name: Aggregatibacter actinomycetemcomitans serotype a str. H5P1


organism_name: Aggregatibacter actinomycetemcomitans serotype d str. I63B


organism_name: Aggregatibacter actinomycetemcomitans serotype e str. SCC393


organism_name: Aggregatibacter actinomycetemcomitans serotype f str. D18P1


organism_name: Aggregatibacter actinomycetemcomitans serotype b str. SCC1398


organism_name: Aggregatibacter actinomycetemcomitans serotype b str. I23C


organism_name: Aggregatibacter actinomycetemcomitans serotype c str. SCC2302


asm_submitter: The University of Exeter

organism_name: Xanthomonas sp. NCPPB 1131


organism_name: Xanthomonas sp. NCPPB 1132


asm_submitter: College of Life Sciences, Zhejiang University

organism_name: Natronobacterium lacisalsi AJ5


asm_submitter: DOE Great Lakes Bioenergy Research Center

organism_name: Streptomyces sp. Wigar10


organism_name: Ralstonia sp. 5_2_56FAA


asm_submitter: Gordon and Betty Moore Foundation Marine Microbiology Initiative

excluded_from_refseq: genus undefined

organism_name: gamma proteobacterium HIMB55


organism_name: gamma proteobacterium HIMB30


asm_submitter: Rede Paraense de Genômica e Proteômica

infraspecific_name: strain=CIP 52.97

organism_name: Corynebacterium pseudotuberculosis CIP 52.97


organism_name: Thiomicrospira aerophila AL3


infraspecific_name: strain=ARh 4

organism_name: Thioalkalivibrio thiocyanoxidans ARh 4


asm_submitter: JGI

organism_name: Thermobacillus composti KWC4


infraspecific_name: strain=ATCC 700588

organism_name: Thiorhodospira sibirica ATCC 700588


infraspecific_name: strain=DSM 198

organism_name: Thiocystis violascens DSM 198


asm_submitter: JCVI

organism_name: Streptococcus sobrinus TCI-348


organism_name: Streptococcus sobrinus TCI-349


organism_name: Streptococcus sobrinus TCI-374


organism_name: Streptococcus sobrinus TCI-376


organism_name: Streptococcus sobrinus TCI-194


organism_name: Thiorhodovibrio frisius


organism_name: Thermotoga maritima MSB8


organism_name: Rhodanobacter denitrificans


organism_name: Natronobacterium gregoryi SP2


infraspecific_name: strain=DSM 15624

organism_name: Natrinema pellirubrum DSM 15624


organism_name: Mycolicibacterium rhodesiae NBB3


excluded_from_refseq: genome length too large

organism_name: Mycolicibacterium rhodesiae JS60


organism_name: Halobacterium sp. DL1


organism_name: Hyphomicrobium denitrificans 1NES1


organism_name: Mesorhizobium australicum WSM2073


infraspecific_name: strain=DSM 16532

organism_name: Desulfurococcus amylolyticus DSM 16532


infraspecific_name: strain=YIM 90007

organism_name: Saccharomonospora iraqiensis subsp. paurometabolica YIM 90007


organism_name: Saccharomonospora azurea NA-128


infraspecific_name: strain=ATCC 39116

organism_name: Amycolatopsis sp. ATCC 39116


infraspecific_name: strain=DSM 13257

organism_name: Desulfosporosinus meridiei DSM 13257


infraspecific_name: strain=DSM 15288

organism_name: Desulfitobacterium metallireducens DSM 15288


infraspecific_name: strain=ATCC 51472

organism_name: Crocosphaera subtropica ATCC 51472


asm_submitter: Life Technologies

organism_name: Salmonella enterica subsp. enterica serovar Adelaide str. A4-669


organism_name: Salmonella enterica subsp. enterica serovar Alachua str. R6-377


organism_name: Salmonella enterica subsp. enterica serovar Gaminara str. A4-567


excluded_from_refseq: abnormal gene to sequence ratio; annotation fails completeness check; many frameshifted proteins

organism_name: Salmonella enterica subsp. enterica serovar Give str. S5-487


organism_name: Salmonella enterica subsp. enterica serovar Hvittingfoss str. A4-620


organism_name: Salmonella enterica subsp. enterica serovar Inverness str. R8-3668


organism_name: Salmonella enterica subsp. enterica serovar Johannesburg str. S5-703


organism_name: Salmonella enterica subsp. enterica serovar Minnesota str. A4-603


organism_name: Salmonella enterica subsp. enterica serovar Mississippi str. A4-633


organism_name: Salmonella enterica subsp. enterica serovar Montevideo str. S5-403


organism_name: Salmonella enterica subsp. enterica serovar Rubislaw str. A4-653


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg str. A4-543


organism_name: Salmonella enterica subsp. enterica serovar Uganda str. R8-3404


organism_name: Salmonella enterica subsp. enterica serovar Urbana str. R8-2977


organism_name: Salmonella enterica subsp. enterica serovar Wandsworth str. A4-580


asm_submitter: Institute for Genome Sciences

organism_name: Streptococcus pneumoniae GA11184


organism_name: Streptococcus pneumoniae GA47502


organism_name: Streptococcus pneumoniae 4027-06


organism_name: Streptococcus pneumoniae 6735-05


organism_name: Streptococcus pneumoniae GA44288


organism_name: Streptococcus pneumoniae GA47281


organism_name: Streptococcus pneumoniae GA47033


organism_name: Streptococcus pneumoniae GA43265


organism_name: Streptococcus pneumoniae GA44452


organism_name: Streptococcus pneumoniae GA49138


organism_name: Streptococcus pneumoniae GA16531


organism_name: Streptococcus pneumoniae 6901-05


organism_name: Streptococcus pneumoniae 7286-06


organism_name: Streptococcus pneumoniae NP070


organism_name: Streptococcus pneumoniae GA44500


organism_name: Streptococcus pneumoniae GA41410


organism_name: Streptococcus pneumoniae GA49447


organism_name: Streptococcus pneumoniae GA41538


organism_name: Streptococcus pneumoniae 5787-06


organism_name: Streptococcus pneumoniae GA18523


organism_name: Streptococcus pneumoniae GA44194


organism_name: Streptococcus pneumoniae GA44511


organism_name: Streptococcus pneumoniae GA07643


organism_name: Streptococcus pneumoniae GA11304


organism_name: Streptococcus pneumoniae GA11426


organism_name: Streptococcus pneumoniae GA11663


organism_name: Streptococcus pneumoniae GA13338


organism_name: Streptococcus pneumoniae GA13455


organism_name: Streptococcus pneumoniae GA13494


organism_name: Streptococcus pneumoniae GA13637


organism_name: Streptococcus pneumoniae GA14798


organism_name: Streptococcus pneumoniae GA16121


organism_name: Streptococcus pneumoniae GA16242


organism_name: Streptococcus pneumoniae GA16833


organism_name: Streptococcus pneumoniae GA17227


organism_name: Streptococcus pneumoniae GA17328


organism_name: Streptococcus pneumoniae GA17371


organism_name: Streptococcus pneumoniae GA17971


organism_name: Streptococcus pneumoniae GA19077


organism_name: Streptococcus pneumoniae GA19451


organism_name: Streptococcus pneumoniae GA41277


organism_name: Streptococcus pneumoniae GA41437


organism_name: Streptococcus pneumoniae GA41565


organism_name: Streptococcus pneumoniae GA41688


organism_name: Streptococcus pneumoniae GA43380


organism_name: Streptococcus pneumoniae GA47283


organism_name: Streptococcus pneumoniae GA47373


organism_name: Streptococcus pneumoniae GA47688


organism_name: Streptococcus pneumoniae GA47778


organism_name: Streptococcus pneumoniae GA47976


organism_name: Streptococcus pneumoniae GA54644


organism_name: Streptococcus pneumoniae NP127


organism_name: Streptococcus pneumoniae GA47751


organism_name: Streptococcus pneumoniae 5185-06


organism_name: Streptococcus pneumoniae 3063-00


organism_name: Streptococcus pneumoniae EU-NP01


organism_name: Streptococcus pneumoniae GA19690


excluded_from_refseq: annotation fails completeness check


asm_submitter: South China University of Technology

infraspecific_name: strain=ATCC 14067

organism_name: Corynebacterium glutamicum ATCC 14067


asm_submitter: Broad Institute

organism_name: Clostridium sp. 7_3_54FAA


organism_name: Propionibacterium sp. 5_U_42AFAA


asm_submitter: International Institute of Tropical Agriculture

infraspecific_name: strain=Kenyan

organism_name: Xanthomonas vasicola pv. musacearum 'Kenyan'


asm_submitter: TEDA School of Biological Sciences and Biotechnology, Nankai University, 23 Hongda Street, Tianjin 300457, China

organism_name: Escherichia coli cloneA_i1


organism_name: Desulfobacter postgatei 2ac9


infraspecific_name: strain=DSM 7213

organism_name: Desulfoscipio gibsoniae DSM 7213


asm_submitter: Rede Paraense de Genomica e Proteomica