organism_name: Lachnospira eligens CAG:72


annotation_name: Annotation submitted by NCBI RefSeq

annotation_provider: NCBI RefSeq

asm_submitter: DTU

assembly_level: Scaffold

assembly_type: haploid

excluded_from_refseq: derived from metagenome; genus undefined

genome_rep: Full

group: bacteria

organism_name: Firmicutes bacterium CAG:475

paired_asm_comp: identical

release_type: Major

version_status: suppressed


excluded_from_refseq: derived from metagenome

organism_name: Prevotella sp. CAG:5226


organism_name: Dialister sp. CAG:486


organism_name: Clostridium sp. CAG:533


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Prevotella sp. CAG:604


organism_name: Collinsella sp. CAG:166


organism_name: Clostridium sp. CAG:524


organism_name: Firmicutes bacterium CAG:56


organism_name: Faecalibacterium sp. CAG:82


organism_name: Clostridium sp. CAG:510


organism_name: Firmicutes bacterium CAG:110


organism_name: Faecalibacterium sp. CAG:1138


organism_name: Ruminococcus sp. CAG:579


organism_name: Firmicutes bacterium CAG:308


organism_name: Bacteroides sp. CAG:530


annotation_name: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

organism_name: Streptococcus thermophilus CAG:236


organism_name: Eggerthella sp. CAG:368


organism_name: [Eubacterium] siraeum CAG:80


organism_name: Proteobacteria bacterium CAG:139


organism_name: Clostridium sp. CAG:594


organism_name: Sutterella sp. CAG:397


organism_name: Bacteroides sp. CAG:754


organism_name: Ruminococcus sp. CAG:563


organism_name: Bacteroides sp. CAG:709


organism_name: Firmicutes bacterium CAG:65


organism_name: Prevotella sp. CAG:520


organism_name: Firmicutes bacterium CAG:341


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Bacteroides stercoris CAG:120


organism_name: Clostridium sp. CAG:138


organism_name: Bacteroides sp. CAG:770


organism_name: Bacteroides sp. CAG:462


excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome; genome length too small

organism_name: Roseburia intestinalis CAG:13


organism_name: Clostridium sp. CAG:245


organism_name: Clostridium sp. CAG:169


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Blautia sp. CAG:52


organism_name: Bifidobacterium adolescentis CAG:119


organism_name: Segatella copri CAG:164


organism_name: Clostridium sp. CAG:557


organism_name: Firmicutes bacterium CAG:114


organism_name: Clostridium sp. CAG:964


organism_name: Clostridium sp. CAG:91


organism_name: Clostridium sp. CAG:798


organism_name: Firmicutes bacterium CAG:94


organism_name: Bacteroides sp. CAG:875


excluded_from_refseq: unverified source organism; derived from metagenome

organism_name: Clostridium sp. CAG:242


organism_name: Cryptobacterium sp. CAG:338


organism_name: Firmicutes bacterium CAG:552


organism_name: Firmicutes bacterium CAG:582


organism_name: Clostridium sp. CAG:575


organism_name: Firmicutes bacterium CAG:176


organism_name: Clostridium sp. CAG:230


organism_name: Firmicutes bacterium CAG:882


organism_name: Firmicutes bacterium CAG:238


organism_name: Prevotella sp. CAG:1320


organism_name: Clostridium sp. CAG:299


organism_name: Eggerthella sp. CAG:298


organism_name: Lachnospiraceae bacterium CAG:215


organism_name: Firmicutes bacterium CAG:145


organism_name: Odoribacter splanchnicus CAG:14


organism_name: Clostridium sp. CAG:508


organism_name: Firmicutes bacterium CAG:270


organism_name: Clostridium sp. CAG:58


organism_name: Eubacterium sp. CAG:192


organism_name: Ruminococcus sp. CAG:9


organism_name: Anaerobutyricum hallii CAG:12


organism_name: Tannerella sp. CAG:118


organism_name: Bifidobacterium bifidum CAG:234


organism_name: Erysipelotrichaceae bacterium CAG:64


organism_name: Oscillibacter sp. CAG:241


organism_name: Firmicutes bacterium CAG:137


organism_name: Prevotella sp. CAG:732


organism_name: Bacteroides sp. CAG:714


organism_name: Eggerthella sp. CAG:209


organism_name: Phascolarctobacterium sp. CAG:266


organism_name: Firmicutes bacterium CAG:534


organism_name: Phocaeicola dorei CAG:222


organism_name: Clostridium sp. CAG:505


organism_name: Clostridium sp. CAG:62


organism_name: Azospirillum sp. CAG:260


organism_name: Ruminococcus sp. CAG:177


organism_name: Prevotella sp. CAG:873


organism_name: Clostridium sp. CAG:1193


organism_name: Firmicutes bacterium CAG:240


organism_name: Clostridium sp. CAG:217


organism_name: Azospirillum sp. CAG:239


organism_name: Akkermansia muciniphila CAG:154


organism_name: Firmicutes bacterium CAG:102


organism_name: Bacteroides ovatus CAG:22


organism_name: [Clostridium] clostridioforme CAG:132


organism_name: Eubacterium sp. CAG:248


organism_name: Parabacteroides sp. CAG:409


organism_name: Bacteroides eggerthii CAG:109


organism_name: Eubacterium sp. CAG:252


organism_name: Bacteroides cellulosilyticus CAG:158


organism_name: Prevotella sp. CAG:1124


organism_name: Coprococcus sp. CAG:131


organism_name: Eubacterium sp. CAG:115


organism_name: Prevotella sp. CAG:1185


organism_name: Coprococcus comes CAG:19


organism_name: Firmicutes bacterium CAG:170


organism_name: Clostridium sp. CAG:253


organism_name: Eubacterium sp. CAG:202


organism_name: Bacteroides sp. CAG:1076


organism_name: Eubacterium sp. CAG:251


organism_name: Bacteroides finegoldii CAG:203


organism_name: Prevotella sp. CAG:1092


organism_name: Firmicutes bacterium CAG:227


organism_name: Roseburia sp. CAG:100


organism_name: Clostridium sp. CAG:1000


organism_name: Blautia obeum CAG:39


organism_name: Anaerotruncus sp. CAG:390


organism_name: Ruminococcus sp. CAG:55


group: archaea

organism_name: Methanobrevibacter smithii CAG:186


organism_name: Roseburia sp. CAG:471


organism_name: Clostridium sp. CAG:470


organism_name: Bacteroides intestinalis CAG:315


organism_name: Collinsella sp. CAG:289


organism_name: Dorea longicatena CAG:42


organism_name: Clostridium sp. CAG:440


organism_name: Coprobacillus sp. CAG:826


organism_name: Ruminococcus sp. CAG:403


organism_name: Clostridium sp. CAG:411


organism_name: Bacteroides uniformis CAG:3


organism_name: Mycoplasma sp. CAG:472


organism_name: Bacillus sp. CAG:988


organism_name: Firmicutes bacterium CAG:460


organism_name: Eubacterium sp. CAG:841


organism_name: Clostridium sp. CAG:288


organism_name: Ruminococcus sp. CAG:90


organism_name: Clostridium sp. CAG:768


organism_name: Clostridium sp. CAG:354


organism_name: Tannerella sp. CAG:51


organism_name: Prevotella sp. CAG:485


organism_name: Acidiphilium sp. CAG:727


organism_name: Acidaminococcus sp. CAG:917


organism_name: Clostridium sp. CAG:307


organism_name: Faecalibacterium sp. CAG:74


organism_name: Sutterella sp. CAG:521


organism_name: Clostridium sp. CAG:729


organism_name: Prevotella sp. CAG:891


organism_name: Firmicutes bacterium CAG:321


organism_name: Eubacterium sp. CAG:38


organism_name: Roseburia sp. CAG:303


organism_name: Fusobacterium sp. CAG:815


organism_name: Prevotella sp. CAG:279


organism_name: Methanoculleus sp. CAG:1088


organism_name: Clostridium sp. CAG:567


organism_name: Clostridium sp. CAG:269


organism_name: Clostridium sp. CAG:914


organism_name: Subdoligranulum sp. CAG:314


organism_name: Megasphaera elsdenii CAG:570


organism_name: Eubacterium sp. CAG:76


organism_name: Eubacterium sp. CAG:581


organism_name: Bacteroides thetaiotaomicron CAG:40


organism_name: Coraliomargarita sp. CAG:312


organism_name: Phocaeicola vulgatus CAG:6


organism_name: Clostridium sp. CAG:813


organism_name: Clostridium sp. CAG:609


organism_name: Clostridium sp. CAG:277


organism_name: Prevotella sp. CAG:617


organism_name: Streptococcus salivarius CAG:79


organism_name: Firmicutes bacterium CAG:95


organism_name: Fusobacterium sp. CAG:439


organism_name: Mycoplasma sp. CAG:776


organism_name: [Clostridium] clostridioforme CAG:511


organism_name: Sutterella sp. CAG:351


organism_name: Clostridium sp. CAG:389


organism_name: Blautia sp. CAG:37


organism_name: Clostridium sp. CAG:451


organism_name: Ruminococcus sp. CAG:353


organism_name: Dialister sp. CAG:588


organism_name: Clostridium sp. CAG:273


organism_name: Roseburia sp. CAG:182


organism_name: Bacteroides sp. CAG:98


organism_name: Clostridium sp. CAG:628


organism_name: Ruminococcus sp. CAG:624


asm_submitter: IMPAM

assembly_level: Contig

excluded_from_refseq: annotation fails completeness check

organism_name: Helicobacter pylori HPARG8G


asm_submitter: csir-cftri microbe

excluded_from_refseq: derived from single cell

organism_name: Enterococcus raffinosus cftri2200


asm_submitter: Institute of Microbiology, Chinese Academy of Sciences

excluded_from_refseq: contaminated

organism_name: Exiguobacterium sp. 8-11-1


asm_submitter: University of California at Davis

assembly_level: Complete Genome

organism_name: Listeria monocytogenes

version_status: replaced


asm_submitter: University of Florence

infraspecific_name: strain=DSM 759

organism_name: Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759


asm_submitter: Rede Paraense de genômica e proteômica

organism_name: Vibrio paracholerae VCC19


asm_submitter: DOE Joint Genome Institute

excluded_from_refseq: derived from single cell; genus undefined

infraspecific_name: strain=JGI 001012-O08

organism_name: Rhizobiales bacterium JGI 001012-O08


infraspecific_name: strain=JGI 001013-F22

organism_name: Rhizobium sp. JGI 001013-F22


infraspecific_name: strain=JGI 001010-B17

organism_name: Oxalobacteraceae bacterium JGI 001010-B17


excluded_from_refseq: contaminated; derived from single cell; genus undefined

organism_name: Proteobacteria bacterium JGI 0000113-P07


infraspecific_name: strain=SCGC AAA028-I14

organism_name: actinobacterium SCGC AAA028-I14


infraspecific_name: strain=SCGC AAA027-G08

organism_name: Bacteroidetes bacterium SCGC AAA027-G08


excluded_from_refseq: contaminated; derived from single cell

infraspecific_name: strain=JGI 001012-B17

organism_name: Burkholderia sp. JGI 001012-B17


infraspecific_name: strain=SCGC AAA027-N21

organism_name: Bacteroidetes bacterium SCGC AAA027-N21


asm_submitter: University of Malaya

organism_name: Helicobacter pylori UM298


asm_name: Sphingobium sp. strain YL-JM2C

asm_submitter: Institute of Urban Environment

excluded_from_refseq: contaminated; unverified source organism

organism_name: Sphingomonas sp. YL-JM2C


asm_submitter: Nanjing Agricultural University Bioinformatics Center

excluded_from_refseq: many frameshifted proteins

organism_name: Glaesserella parasuis ZJ0906


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189


asm_submitter: University Miguel Hernandez

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

infraspecific_name: strain=English Channel 615

organism_name: Alteromonas mediterranea 615


organism_name: Clostridium botulinum CFSAN002367


organism_name: Clostridium botulinum A1 str. CFSAN002368


organism_name: Clostridium botulinum CFSAN002369


asm_submitter: Los Alamos National Laboratory

organism_name: Clostridium botulinum Af84


asm_name: L.gasseri 2016 V1

asm_submitter: Kingston University

organism_name: Lactobacillus gasseri 2016


asm_name: Bacillus cereus LCT-BC25

asm_submitter: BGI

excluded_from_refseq: unverified source organism

organism_name: Bacillus cereus LCT-BC25


asm_name: Bacillus cereus LCT-BC235

organism_name: Bacillus cereus LCT-BC235


asm_submitter: National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control

organism_name: Streptococcus suis 86-5192


organism_name: Streptococcus suis 89-4109-1


organism_name: Streptococcus suis 88-1861


asm_name: Escherichia coli O127:H6 str. E2348/69 substr. CVDNalr

asm_submitter: Institute for Genome Sciences

infraspecific_name: strain=E2348/69 substr. CVDNalr


asm_name: Escherichia coli O127:H6 str. E2348/69 substr. UMD753

infraspecific_name: strain=E2348/69 substr. UMD753


asm_submitter: Baylor College of Medicine

excluded_from_refseq: genus undefined

organism_name: Bacteroidetes bacterium oral taxon 272 str. F0290


asm_name: Thalar

asm_submitter: Roseobacter SFB

infraspecific_name: strain=DSM 19593

organism_name: Litoreibacter arenae DSM 19593


asm_submitter: Yale

excluded_from_refseq: abnormal gene to sequence ratio; derived from metagenome; missing rRNA genes

infraspecific_name: strain=ALF

organism_name: Candidatus Nasuia deltocephalinicola str. NAS-ALF


excluded_from_refseq: genome length too small

organism_name: Candidatus Karelsulcia muelleri str. Sulcia-ALF


asm_submitter: DTU

excluded_from_refseq: derived from metagenome

organism_name: Lactobacillus amylovorus CAG:719


asm_submitter: J. Craig Venter Institute

excluded_from_refseq: RefSeq annotation failed; annotation fails completeness check; many frameshifted proteins

organism_name: Streptococcus pyogenes GA40634


organism_name: Streptococcus pyogenes GA41345


asm_submitter: Kansas State University

infraspecific_name: strain=ATCC 9714

organism_name: Paraclostridium sordellii ATCC 9714


asm_submitter: Beijing institution of Radiation Medicine, Beijing, China

organism_name: Helicobacter pylori wls-5-12


asm_submitter: University Of Melbourne

organism_name: Enterococcus faecium Aus0085


asm_submitter: Jiangsu Key Laboratory of Zoonosis, Yangzhou University

organism_name: Salmonella enterica subsp. enterica serovar Pullorum str. S06004


asm_name: Denovo assembly

asm_submitter: Madurai Kamaraj University

organism_name: Brucella melitensis ADMAS-G1


asm_submitter: Iowa State University

organism_name: Glaesserella parasuis SW114


infraspecific_name: strain=MN-H

organism_name: Glaesserella parasuis MN-H


organism_name: Glaesserella parasuis 12939


organism_name: Glaesserella parasuis H465


organism_name: Glaesserella parasuis 174


organism_name: Glaesserella parasuis SW140


asm_submitter: CSIRO

excluded_from_refseq: RefSeq annotation failed; derived from metagenome

organism_name: Thermotoga sp. A7A


asm_submitter: University of Melbourne

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium str. STm7


asm_name: GC Assembler

asm_submitter: National Environmental Engineering Research Institute-CSIR

organism_name: Klebsiella pneumoniae EGD-HP19-C


asm_name: Desulfonauticus sp.

excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Desulfonauticus sp. A7A


asm_submitter: Copenhagen University

organism_name: Streptococcus equi subsp. zooepidemicus SzS31A1


asm_submitter: Microbiology Laboratory, Hangzhou Yuhang Hospital of Traditional Chinese Medicine, Hangzhou, PR China

organism_name: Klebsiella pneumoniae JM45


asm_submitter: University of California Irvine

organism_name: Borrelia miyamotoi LB-2001


release_type: Minor


asm_submitter: Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory

infraspecific_name: strain=DSM 2662

organism_name: Sporomusa ovata DSM 2662


asm_submitter: Shizuoka University

organism_name: Geobacillus genomosp. 3


asm_submitter: University of Maryland School of Medicine

organism_name: Escherichia coli C12_92


organism_name: Escherichia coli C1244_91


organism_name: Escherichia coli C1214_90


organism_name: Escherichia coli C154_11


organism_name: Escherichia coli C155_11


organism_name: Escherichia coli C157_11


organism_name: Escherichia coli C161_11


organism_name: Escherichia coli C213_10


organism_name: Escherichia coli OK1114


organism_name: Escherichia coli C166_11


asm_submitter: IGS

organism_name: Escherichia coli C2139_99


organism_name: Escherichia coli C238_91


organism_name: Escherichia coli C260_92


organism_name: Escherichia coli C262_10


organism_name: Escherichia coli C283_09


organism_name: Escherichia coli C295_10


organism_name: Escherichia coli C341_10


organism_name: Escherichia coli C343_08


organism_name: Escherichia coli C347_93


organism_name: Escherichia coli C353_09


organism_name: Escherichia coli C354_03B


organism_name: Escherichia coli C40_11


organism_name: Escherichia coli C418_89


organism_name: Escherichia coli C458_10


organism_name: Escherichia coli C488_07


organism_name: Escherichia coli C496_10


organism_name: Escherichia coli C497_10


organism_name: Escherichia coli C527_94


organism_name: Escherichia coli C581_05


organism_name: Escherichia coli C58_11


organism_name: Escherichia coli C586_05


organism_name: Escherichia coli C652_10


organism_name: Escherichia coli C654_09


organism_name: Escherichia coli C717_10


organism_name: Escherichia coli C725_88


organism_name: Escherichia coli C732_98


organism_name: Escherichia coli C743_03


organism_name: Escherichia coli C751_03


organism_name: Escherichia coli C78_09C


organism_name: Escherichia coli C79_08


organism_name: Escherichia coli C792_92


organism_name: Escherichia coli C796_10


organism_name: Escherichia coli C799_92


organism_name: Escherichia coli C80_08


organism_name: Escherichia coli C807_09


organism_name: Escherichia coli C82_11


organism_name: Escherichia coli C824_10


organism_name: Escherichia coli C842_97


organism_name: Escherichia coli C87_11


organism_name: Escherichia coli C887_10


organism_name: Escherichia coli C900_01


organism_name: Escherichia coli C93_11


organism_name: Escherichia coli C9_92


organism_name: Escherichia coli C170_11


asm_name: amd a-plasma

asm_submitter: University of California Berkeley

excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Thermoplasmatales archaeon A-plasma


asm_submitter: University of California, Berkeley

organism_name: candidate division Zixibacteria bacterium RBG-1


asm_submitter: Indian Institute of Technology Kharagpur

organism_name: Sphingobacterium sp. IITKGP-BTPF85


asm_submitter: JGI

infraspecific_name: strain=PCC 9431

organism_name: Fischerella sp. PCC 9431


asm_submitter: Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires

organism_name: Aeromonas salmonicida subsp. pectinolytica 34mel


asm_submitter: Top Institute Food and Nutrition

organism_name: Lactococcus cremoris subsp. cremoris TIFN5


excluded_from_refseq: fragmented assembly

organism_name: Lactococcus cremoris subsp. cremoris TIFN6


asm_submitter: Directorate of Groundnut Research (Indian Council of Agricultural Research)

organism_name: haloarchaeon 3A1-DGR


organism_name: Lactococcus cremoris subsp. cremoris TIFN1


organism_name: Lactococcus cremoris subsp. cremoris TIFN3


organism_name: Leuconostoc mesenteroides subsp. cremoris TIFN8


organism_name: Lactococcus cremoris subsp. cremoris TIFN7


excluded_from_refseq: annotation fails completeness check

organism_name: Neisseria meningitidis NM151


organism_name: Neisseria meningitidis NM0552


asm_submitter: MIT

organism_name: Helicobacter pylori PZ5004


organism_name: Helicobacter pylori PZ5024


organism_name: Helicobacter pylori PZ5056


organism_name: Helicobacter pylori PZ5080


organism_name: Helicobacter pylori PZ5086


asm_submitter: Vanderbilt University School of Medicine

organism_name: Helicobacter pylori SouthAfrica50


asm_submitter: Top Institute Food and Nutrition (TIFN)

assembly_level: Chromosome

organism_name: Streptococcus sp. HSISM1


organism_name: Enterococcus sp. HSIEG1


organism_name: Streptococcus sp. HSISB1


organism_name: Streptococcus sp. HSISS1


organism_name: Streptococcus salivarius


organism_name: Veillonella parvula HSIVP1


asm_submitter: Institute for Genome Sciences

organism_name: Clostridioides difficile CD17


organism_name: Clostridioides difficile CD21


organism_name: Clostridioides difficile CD34


organism_name: Clostridioides difficile CD22


organism_name: Clostridioides difficile DA00189


organism_name: Clostridioides difficile CD3


organism_name: Clostridioides difficile CD8


organism_name: Clostridioides difficile CD9


organism_name: Clostridioides difficile CD13


organism_name: Clostridioides difficile CD18


organism_name: Clostridioides difficile CD38


excluded_from_refseq: missing rRNA genes

organism_name: Clostridioides difficile CD39


organism_name: Clostridioides difficile CD40


organism_name: Clostridioides difficile CD41


organism_name: Clostridioides difficile CD42


organism_name: Clostridioides difficile CD43


organism_name: Clostridioides difficile CD44


organism_name: Clostridioides difficile CD45


organism_name: Clostridioides difficile CD46


organism_name: Clostridioides difficile CD47


organism_name: Clostridioides difficile CD49


organism_name: Clostridioides difficile CD51


organism_name: Clostridioides difficile CD68


organism_name: Clostridioides difficile CD69


organism_name: Clostridioides difficile DA00306


organism_name: Clostridioides difficile CD70


organism_name: Clostridioides difficile CD109


organism_name: Clostridioides difficile DA00273


organism_name: Clostridioides difficile CD129


organism_name: Clostridioides difficile CD131


organism_name: Clostridioides difficile CD132


organism_name: Clostridioides difficile CD133


organism_name: Clostridioides difficile CD144


organism_name: Clostridioides difficile CD149


organism_name: Clostridioides difficile CD159


excluded_from_refseq: genome length too large

organism_name: Clostridioides difficile CD160


organism_name: Clostridioides difficile CD165


organism_name: Clostridioides difficile CD166


organism_name: Clostridioides difficile CD169


organism_name: Clostridioides difficile CD170


organism_name: Clostridioides difficile CD175


organism_name: Clostridioides difficile CD178


organism_name: Clostridioides difficile DA00261


organism_name: Clostridioides difficile CD181


organism_name: Clostridioides difficile CD196


organism_name: Clostridioides difficile DA00275


organism_name: Clostridioides difficile CD200


organism_name: Clostridioides difficile CD201


organism_name: Clostridioides difficile CD206


organism_name: Clostridioides difficile CD211


organism_name: Clostridioides difficile CD212


organism_name: Clostridioides difficile 655


organism_name: Clostridioides difficile 824


organism_name: Clostridioides difficile 840


organism_name: Clostridioides difficile 842


organism_name: Clostridioides difficile 6042


organism_name: Clostridioides difficile 6057


organism_name: Clostridioides difficile DA00044


organism_name: Clostridioides difficile DA00062


organism_name: Clostridioides difficile DA00065


organism_name: Clostridioides difficile DA00114


organism_name: Clostridioides difficile DA00126


organism_name: Clostridioides difficile DA00128


organism_name: Clostridioides difficile DA00129


organism_name: Clostridioides difficile DA00131


organism_name: Clostridioides difficile DA00132


organism_name: Clostridioides difficile DA00134


organism_name: Clostridioides difficile DA00141


organism_name: Clostridioides difficile DA00145


organism_name: Clostridioides difficile DA00149


organism_name: Clostridioides difficile DA00154


organism_name: Clostridioides difficile DA00160


organism_name: Clostridioides difficile DA00165


organism_name: Clostridioides difficile DA00167


organism_name: Clostridioides difficile DA00174


organism_name: Clostridioides difficile DA00183


organism_name: Clostridioides difficile DA00191


organism_name: Clostridioides difficile DA00193


organism_name: Clostridioides difficile DA00195


organism_name: Clostridioides difficile DA00196


organism_name: Clostridioides difficile DA00197


organism_name: Clostridioides difficile DA00203


organism_name: Clostridioides difficile DA00210


organism_name: Clostridioides difficile DA00211


organism_name: Clostridioides difficile DA00212


organism_name: Clostridioides difficile DA00215


organism_name: Clostridioides difficile DA00216


organism_name: Clostridioides difficile DA00232


organism_name: Clostridioides difficile DA00238


organism_name: Clostridioides difficile DA00244


organism_name: Clostridioides difficile DA00245


organism_name: Clostridioides difficile DA00246


organism_name: Clostridioides difficile P6


organism_name: Clostridioides difficile P21


organism_name: Clostridioides difficile DA00307


organism_name: Clostridioides difficile DA00310


organism_name: Clostridioides difficile DA00313


organism_name: Clostridioides difficile F152


organism_name: Clostridioides difficile F249


organism_name: Clostridioides difficile F253


organism_name: Clostridioides difficile F314


organism_name: Clostridioides difficile F501


organism_name: Clostridioides difficile Y10


organism_name: Clostridioides difficile Y21


organism_name: Clostridioides difficile Y41


organism_name: Clostridioides difficile Y155


organism_name: Clostridioides difficile Y401


organism_name: Clostridioides difficile P1


organism_name: Clostridioides difficile P2


organism_name: Clostridioides difficile P5


organism_name: Clostridioides difficile P28


excluded_from_refseq: contaminated; unverified source organism; genome length too large

organism_name: Clostridioides difficile Y384


organism_name: Clostridioides difficile P23


organism_name: Clostridioides difficile P24


organism_name: Clostridioides difficile P25


organism_name: Clostridioides difficile Y184


organism_name: Clostridioides difficile Y247


organism_name: Clostridioides difficile Y202


organism_name: Clostridioides difficile Y266


organism_name: Clostridioides difficile CD90


organism_name: Clostridioides difficile CD104


organism_name: Clostridioides difficile Y215


organism_name: Clostridioides difficile CD111


organism_name: Clostridioides difficile CD113


organism_name: Clostridioides difficile CD127


organism_name: Clostridioides difficile Y165


organism_name: Clostridioides difficile Y270


organism_name: Clostridioides difficile Y312


organism_name: Clostridioides difficile Y231


organism_name: Clostridioides difficile Y171


organism_name: Clostridioides difficile DA00256


organism_name: Clostridioides difficile Y307


organism_name: Clostridioides difficile Y343


organism_name: Clostridioides difficile Y358


organism_name: Clostridioides difficile Y381


organism_name: Clostridioides difficile P3


organism_name: Clostridioides difficile P8


organism_name: Clostridioides difficile P9


organism_name: Clostridioides difficile P11


organism_name: Clostridioides difficile P13


organism_name: Clostridioides difficile P15


organism_name: Clostridioides difficile P20


organism_name: Clostridioides difficile P29


organism_name: Clostridioides difficile P31


organism_name: Clostridioides difficile P36


organism_name: Clostridioides difficile P42


organism_name: Clostridioides difficile P45


organism_name: Clostridioides difficile P46


organism_name: Clostridioides difficile P48


organism_name: Clostridioides difficile P49


organism_name: Clostridioides difficile P50


organism_name: Clostridioides difficile P61


organism_name: Clostridioides difficile P78


organism_name: Clostridioides difficile P69


organism_name: Clostridioides difficile P70


organism_name: Clostridioides difficile P72


organism_name: Clostridioides difficile P71


organism_name: Clostridioides difficile P74


organism_name: Clostridioides difficile P75


organism_name: Clostridioides difficile P77


infraspecific_name: strain=ATCC 19299

organism_name: Paraclostridium bifermentans ATCC 19299


infraspecific_name: strain=ATCC 638

organism_name: Paraclostridium bifermentans ATCC 638 = DSM 14991


organism_name: Clostridioides difficile F200


organism_name: Clostridioides difficile F480


organism_name: Clostridioides difficile F525


organism_name: Clostridioides difficile F548


organism_name: Clostridioides difficile F601


asm_name: Tager 104

asm_submitter: Auburn University

infraspecific_name: strain=Tager 104

organism_name: Staphylococcus aureus subsp. aureus Tager 104


organism_name: Clostridioides difficile CD86


organism_name: Clostridioides difficile CD88


asm_submitter: University of Arizona

organism_name: Pseudomonas syringae pv. pisi str. PP1


excluded_from_refseq: contaminated

organism_name: Pseudomonas syringae pv. syringae 1212


organism_name: Pseudomonas syringae USA011


organism_name: Pseudomonas syringae USA007


organism_name: Pseudomonas syringae UB303


organism_name: Pseudomonas syringae CC457


organism_name: Pseudomonas syringae CC440


organism_name: Pseudomonas asturiensis


organism_name: Pseudomonas syringae CC1417


organism_name: Pseudomonas syringae UB246


asm_submitter: Bioinformatik, Biozentrum, University of Wuerzbrug

organism_name: Staphylococcus aureus subsp. aureus PS187


asm_submitter: Translational Genomics Research Institute

organism_name: Acinetobacter baumannii TG22212


organism_name: Acinetobacter baumannii TG15237


organism_name: Acinetobacter baumannii TG2012


asm_submitter: J. Craig Venter Institute

organism_name: Streptococcus pyogenes UTSW-2


organism_name: Streptococcus pyogenes UTMEM-1


organism_name: Streptococcus pyogenes GA19681


asm_submitter: Embrapa Environment

organism_name: Rhodococcus sp. P27


asm_submitter: Temasek Lifesciences Laboratory

organism_name: Methylobacterium sp. L2-4


asm_name: Mycobacterium sp UM_WWY

asm_submitter: Universiti Malaya, Kuala Lumpur

organism_name: Mycobacterium sp. UM_WWY


asm_name: Mycobacterium sp UM_RHS

organism_name: Mycobacterium sp. UM_RHS


asm_submitter: University of Illinois at Chicago

infraspecific_name: strain=OT 69

organism_name: Aquipseudomonas alcaligenes OT 69


organism_name: Stenotrophomonas maltophilia MF89


asm_submitter: Geneva University Hospitals, Genomic Research Laboratory.

organism_name: Staphylococcus aureus S1


asm_submitter: University of Strathclyde, Glasgow, UK

infraspecific_name: strain=DSM 43988

organism_name: Corynebacterium diphtheriae DSM 43988


asm_submitter: Broad Institute

infraspecific_name: strain=KOEGE 71 (186a)

organism_name: Escherichia coli KOEGE 71 (186a)


infraspecific_name: strain=UMEA 3318-1

organism_name: Escherichia coli UMEA 3318-1


asm_submitter: University of Hawaii

organism_name: Vibrio coralliilyticus OCN008


asm_submitter: IGS

organism_name: Escherichia coli B26-2


organism_name: Escherichia coli 09BKT076207


organism_name: Escherichia coli B102


organism_name: Escherichia coli B29-1


organism_name: Escherichia coli B107


organism_name: Escherichia coli B26-1


organism_name: Escherichia coli B28-1


organism_name: Escherichia coli B36-2


organism_name: Escherichia coli B7-1


organism_name: Escherichia coli B29-2


organism_name: Escherichia coli B36-1


organism_name: Escherichia coli T1282_01


organism_name: Escherichia coli T924_01


asm_submitter: Institute for Genome Sciences  University of MD School of Medicine

organism_name: Escherichia coli B15


organism_name: Escherichia coli 14A


organism_name: Escherichia coli 2886-75


organism_name: Escherichia coli T1840_97


organism_name: Escherichia coli TW07509


organism_name: Escherichia coli 08BKT055439


organism_name: Escherichia coli 08BKT77219


organism_name: Escherichia coli 09BKT024447


organism_name: Escherichia coli Bd5610_99


organism_name: Escherichia coli T234_00


organism_name: Escherichia coli B7-2


organism_name: Escherichia coli B93


organism_name: Escherichia coli B94


organism_name: Escherichia coli B95


organism_name: Escherichia coli B103


organism_name: Escherichia coli B104


organism_name: Escherichia coli B105


organism_name: Escherichia coli B106


organism_name: Escherichia coli B108


organism_name: Escherichia coli B109


organism_name: Escherichia coli B112


organism_name: Escherichia coli B113


organism_name: Escherichia coli B114


organism_name: Escherichia coli B17


organism_name: Escherichia coli B40-1


organism_name: Escherichia coli B40-2


organism_name: Escherichia coli B49-2


organism_name: Escherichia coli B5-2


organism_name: Escherichia coli B83


organism_name: Escherichia coli B84


organism_name: Escherichia coli B85


organism_name: Escherichia coli B86


organism_name: Escherichia coli B89


organism_name: Escherichia coli B90


organism_name: Escherichia coli Tx1686


organism_name: Escherichia coli Tx3800


asm_submitter: National Environmental Engineering Research Institute-CSIR

organism_name: Lactiplantibacillus plantarum EGD-AQ4


asm_submitter: Nottingham Trent University, UK

infraspecific_name: strain=NCIMB 8272

organism_name: Cronobacter sakazakii NCIMB 8272


organism_name: Franconibacter helveticus LMG 23732


organism_name: Franconibacter pulveris LMG 24059


organism_name: Siccibacter turicensis LMG 23730


asm_submitter: National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control, China

infraspecific_name: strain=Glaxo

organism_name: Mycobacterium tuberculosis variant bovis BCG str. Glaxo


infraspecific_name: strain=Moreau

organism_name: Mycobacterium tuberculosis variant bovis BCG str. Moreau


infraspecific_name: strain=Phipps

organism_name: Mycobacterium tuberculosis variant bovis BCG str. Phipps


infraspecific_name: strain=Prague

organism_name: Mycobacterium tuberculosis variant bovis BCG str. Prague


infraspecific_name: strain=Sweden

organism_name: Mycobacterium tuberculosis variant bovis BCG str. Sweden


asm_submitter: Oak Ridge National Lab

infraspecific_name: strain=ATCC 39006

organism_name: Prodigiosinella confusarubida


asm_name: GS De Novo Assembly

organism_name: Staphylococcus sp. EGD-HP3


asm_submitter: DOE Joint Genome Institute

excluded_from_refseq: contaminated; derived from single cell

infraspecific_name: strain=JGI 001009-G21

organism_name: Burkholderia sp. JGI 001009-G21


excluded_from_refseq: derived from single cell

infraspecific_name: strain=JGI 001013-K11

organism_name: Pelomonas sp. JGI 001013-K11


organism_name: Chitinophaga sp. JGI 0001002-D04


excluded_from_refseq: derived from single cell; genus undefined

infraspecific_name: strain=JGI 0001002-O7

organism_name: Rhizobiales bacterium JGI 0001002-O7


organism_name: Acidobacteria bacterium JGI 0001001-H03


excluded_from_refseq: derived from single cell; genome length too small; genus undefined

infraspecific_name: strain=JGI 0001002-M5

organism_name: Intrasporangiaceae bacterium JGI 0001002-M5


organism_name: Burkholderiales bacterium JGI 0001003-L21


organism_name: Massilia sp. JGI 0001003-B08


organism_name: candidate division TM7 bacterium JGI 0001002-L20


infraspecific_name: strain=JGI 0001002-P8

organism_name: beta proteobacterium JGI 0001002-P8


organism_name: Sphingomonas sp. JGI 0001002-D21


organism_name: Caulobacter sp. JGI 0001002-P11


infraspecific_name: strain=JGI 0001002-K6

organism_name: Oxalobacteraceae bacterium JGI 0001002-K6


organism_name: Burkholderiales bacterium JGI 0001003-J08


organism_name: Rhizobiales bacterium JGI 0001003-E12


organism_name: Burkholderiales bacterium JGI 0001002-H06


organism_name: Bradyrhizobium sp. JGI 0001002-A22


organism_name: Bacillus sp. JGI 0001002-E22


organism_name: Sphingomonas sp. JGI 0001003-D23


organism_name: alpha proteobacterium JGI 0001002-C12


organism_name: Sphingomonas sp. JGI 0001002-I20


organism_name: Sphingomonas sp. JGI 0001003-H15


organism_name: Sphingomonas sp. JGI 0001002-A17


organism_name: Lysobacteraceae bacterium JGI 0001002-D18


infraspecific_name: strain=JGI 0001001-B3

organism_name: Cytophagaceae bacterium JGI 0001001-B3


organism_name: Flavobacterium sp. JGI 0001001-D01


infraspecific_name: strain=JGI 0001003-C6

organism_name: Sphingomonas sp. JGI 0001003-C6


excluded_from_refseq: contaminated; derived from single cell; genome length too small

infraspecific_name: strain=JGI 001014-O06

organism_name: Rhizobium sp. JGI 001014-O06


asm_submitter: University of Connecticut

organism_name: Aeromonas veronii Hm21


asm_submitter: University of Sassari

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Salmonella enterica subsp. enterica serovar Abortusovis str. SS44


asm_submitter: Helmholtz Centre for Environmental Research

infraspecific_name: strain=SCGC AB-539-J10

organism_name: Dehalococcoidia bacterium SCGC AB-539-J10


asm_submitter: University of Copenhagen

infraspecific_name: strain=12656-12 Liver

organism_name: Gallibacterium anatis 12656/12


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Muenchen str. RKS4129


organism_name: Escherichia coli O104:H21 str. CFSAN002237


organism_name: Salmonella enterica subsp. enterica serovar Heidelberg str. SARA33


excluded_from_refseq: many frameshifted proteins

organism_name: Escherichia coli O104:H21 str. CFSAN002236


asm_name: Treponema pedis/T M1

asm_submitter: Swedish University of Agricultural Sciences

infraspecific_name: strain=T M1

organism_name: Treponema pedis str. T M1


asm_name: ST78896 for the version 1 of Salmonella enterica subsp. enterica serovar Typhimurium ST78896

asm_submitter: The Chinese University of Hong Kong

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium str. ST78896


excluded_from_refseq: contaminated; derived from metagenome

organism_name: Bradyrhizobium sp. DFCI-1


asm_submitter: Directorate of Groundnut Research (Indian Council of Agricultural Research)

organism_name: Bacillus sp. NSP9.1


asm_submitter: Wadsworth Center / NYSDOH

excluded_from_refseq: RefSeq annotation failed; many frameshifted proteins

organism_name: Salmonella enterica subsp. enterica serovar Enteritidis str. 10-34587


organism_name: Pantoea dispersa EGD-AAK13


organism_name: Ectopseudomonas chengduensis


organism_name: Serratia marcescens EGD-HP20


organism_name: Acinetobacter baumannii EGD-HP18


asm_submitter: Queensland Department of Health

organism_name: Legionella pneumophila str. Leg01/11


organism_name: Legionella pneumophila str. Leg01/53


organism_name: Ochrobactrum sp. EGD-AQ16


excluded_from_refseq: unverified source organism


asm_name: Bacillus sp. EGD-AK10

asm_submitter: National Environmental Engineering Research Institute

organism_name: Bacillus sp. EGD-AK10


asm_name: Alcaligenes sp. EGD-AK7

organism_name: Alcaligenes sp. EGD-AK7


asm_name: Arthrobacter sp. AK_YN10

organism_name: Arthrobacter sp. AK-YN10


organism_name: Legionella pneumophila str. Leg01/20


asm_name: Pseudomonas sp. EGD-AK9

organism_name: Pseudomonas sp. EGD-AK9


asm_submitter: SCELSE/NTU

organism_name: Klebsiella pneumoniae KP-1


asm_name: Red Oak Large Contigs

asm_submitter: USDA

organism_name: Xylella fastidiosa subsp. multiplex Griffin-1


asm_submitter: Public Health Agency of Canada

organism_name: Campylobacter jejuni subsp. jejuni 00-2538


organism_name: Campylobacter jejuni subsp. jejuni 00-2544


organism_name: Campylobacter jejuni subsp. jejuni 00-2426


asm_submitter: OSDD Open Access Repository

organism_name: Mycobacterium tuberculosis OSDD105


organism_name: Mycobacterium tuberculosis OSDD493


asm_submitter: Washington University

organism_name: Actinomyces johnsonii F0510


organism_name: Actinomyces sp. oral taxon 877 str. F0543


asm_submitter: Washington University Genome Sequencing Center

infraspecific_name: strain=ATCC BAA-442

organism_name: Clostridium sp. ATCC BAA-442


infraspecific_name: strain=KLE 1755

organism_name: Clostridium sp. KLE 1755


excluded_from_refseq: genus undefined

organism_name: Clostridiales bacterium oral taxon 876 str. F0540


asm_submitter: Kingston University

organism_name: Limosilactobacillus fermentum 3872


asm_submitter: Kingston Uniiversity

infraspecific_name: strain=MD IIE-70(2)

organism_name: Lactobacillus jensenii MD IIE-70(2)


isolate: Sokolov


organism_name: Lactiplantibacillus plantarum 2165


organism_name: Lacticaseibacillus rhamnosus 2166


organism_name: Lactobacillus crispatus 2029


organism_name: Lactiplantibacillus plantarum 2025


infraspecific_name: strain=X

organism_name: Campylobacter jejuni X


asm_submitter: Charles Sturt University

organism_name: Pseudomonas fuscovaginae DAR 77795


organism_name: Pseudomonas sp. ICMP 17674


organism_name: Pseudomonas fuscovaginae ICMP 5940


organism_name: Pantoea ananatis DAR 76143


asm_name: Morganella morganii subspecies morgani GM1DA1

asm_submitter: CSIR-IMTECH

organism_name: Morganella morganii subsp. morganii GM1DA1


asm_submitter: University of Missouri - Columbia

organism_name: Staphylococcus equorum UMC-CNS-924


asm_submitter: Microbiology Department, Hospital 12 de octubre

organism_name: Enterobacter roggenkampii EC_38VIM1


asm_submitter: SANKARA NETHRALAYA, VISION RESEARCH FOUNDATION

organism_name: Pseudomonas aeruginosa VRFPA03


asm_submitter: Nottingham Trent University, UK

organism_name: Cronobacter sakazakii 8399


organism_name: Porphyromonas sp. oral taxon 278 str. W7784


organism_name: Streptococcus sobrinus W1703


organism_name: Peptostreptococcaceae bacterium oral taxon 113 str. W5053


asm_name: Serratia fanticola AU-P3(3)

asm_submitter: Institute of Microbial Technology

organism_name: Serratia fonticola AU-P3(3)


asm_name: Legionella pneumophila Leg01_16

asm_submitter: Queensland Department of Health

organism_name: Legionella pneumophila Leg01/16


asm_submitter: Universidad Autonoma de Nuevo Leon

organism_name: Actinomadura madurae LIID-AJ290


asm_submitter: Marshall University School of Medicine

organism_name: Pseudomonas aeruginosa PAO581


asm_name: Cbal4 1.0

asm_submitter: University of Arizona

organism_name: Cellulophaga baltica 4


organism_name: Cellulophaga baltica 18


asm_submitter: J. Craig Venter Institute

organism_name: Streptococcus pyogenes GA06023


asm_submitter: JCVI

organism_name: Coriobacteriaceae bacterium BV3Ac1


organism_name: Streptococcus pyogenes GA41046


asm_submitter: Public Health Agency of Canada

organism_name: Campylobacter jejuni subsp. jejuni 00-2425


organism_name: Pseudomonas aeruginosa c7447m


asm_submitter: Universidad Publica de Navarra

organism_name: Bacillus thuringiensis serovar aizawai str. Leapi01


organism_name: Bacillus thuringiensis serovar aizawai str. Hu4-2


asm_name: Hu4-2 second version


asm_submitter: University of Applied Sciences of Western Switzerland hepia

infraspecific_name: strain=UASWS BA1

organism_name: Bacillus amyloliquefaciens UASWS BA1


asm_submitter: Directorate of Groundnut Research (Indian Council of Agricultural Research)

organism_name: Bacillus sp. SB49


asm_submitter: Washington University

infraspecific_name: strain=KLE 1745

organism_name: Oscillibacter sp. KLE 1745


asm_submitter: University of Manitoba

infraspecific_name: strain=URNW

organism_name: Clostridium intestinale URNW


asm_submitter: Yamaguchi University

organism_name: Holospora obtusa F1


asm_submitter: University of Vienna

organism_name: Paenibacillus sp. P22


asm_submitter: UH

organism_name: Campylobacter coli 76339


asm_submitter: ebi

organism_name: Kingella kingae CC254


organism_name: Kingella kingae KK245


organism_name: Kingella kingae KK242


organism_name: Kingella kingae KK97


asm_submitter: University of Tromso

organism_name: Psychromonas sp. SP041


asm_submitter: salmonicida

excluded_from_refseq: contaminated; missing strain identifier

organism_name: Streptomyces sp. AW19M42


organism_name: Kingella kingae KK190


excluded_from_refseq: annotation fails completeness check

organism_name: Kingella kingae KK411


organism_name: Bacillus sp. NSP2.1


asm_submitter: Insititute for Genome Sciences

organism_name: Chlamydia gallinacea 08-1274/3


asm_submitter: University of Notre Dame

organism_name: actinobacterium LLX17


asm_submitter: Department of Pediatrics, Washington University School of Medicine

organism_name: Escherichia coli M3


organism_name: Escherichia coli M5


asm_submitter: University of Arizona

infraspecific_name: strain=Bimp

organism_name: Candidatus Schmidhempelia bombi str. Bimp


asm_submitter: The University of Tokyo

organism_name: Lachnospiraceae bacterium VE202-23


organism_name: Oscillospiraceae bacterium VE202-24


organism_name: Hungatella hathewayi VE202-11


organism_name: Lachnospiraceae bacterium VE202-12


organism_name: [Clostridium] scindens VE202-05


asm_submitter: Tohoku University

organism_name: Ralstonia pickettii DTP0602


asm_name: Acinetobacter nosocomialis strain M2 genome Version

asm_submitter: The Research Institute at Nationwide Children's Hospital

organism_name: Acinetobacter nosocomialis M2


asm_submitter: National Centre for Cell Science

organism_name: Brucella intermedia 229E


asm_submitter: Center for Microbial Oceanography: Research and Education (C-MORE)

organism_name: Rhodobacteraceae bacterium HIMB11


asm_submitter: INSTITUTO POLITECNICO NACIONAL

organism_name: Helicobacter pylori CG-IMSS-2012


asm_submitter: University of Oklahoma

organism_name: Brevibacillus laterosporus PE36


asm_submitter: DOE Joint Genome Institute

organism_name: Candidatus Pelagibacter ubique HTCC9022


infraspecific_name: strain=USDA 3254

organism_name: Bradyrhizobium elkanii USDA 3254


excluded_from_refseq: contaminated; genome length too large; not used as type

organism_name: Mastigocoleus testarum BC008


infraspecific_name: strain=USDA 135

organism_name: Bradyrhizobium japonicum USDA 135


infraspecific_name: strain=USDA 3259

organism_name: Bradyrhizobium elkanii USDA 3259


asm_submitter: University of Toronto

infraspecific_name: strain=CF

organism_name: Bacteroidales bacterium CF


asm_submitter: Institute for Genome Sciences

organism_name: Clostridioides difficile DA00130


organism_name: Clostridioides difficile P33


organism_name: Clostridioides difficile P41


organism_name: Clostridioides difficile P37


organism_name: Clostridioides difficile P53


organism_name: Clostridioides difficile P64


organism_name: Clostridioides difficile P68


organism_name: Clostridioides difficile F665


asm_submitter: American Type Culture Collection

excluded_from_refseq: genome length too large

infraspecific_name: strain=ATCC 35150

organism_name: Escherichia coli ATCC 35150


asm_submitter: VISION RESEARCH FOUNDATION, SANKARA NETHRALAYA.

organism_name: Pseudomonas aeruginosa VRFPA04


asm_submitter: CIAD, A.C.

infraspecific_name: strain=CAIM 1882

organism_name: Vibrio mimicus CAIM 1882


asm_submitter: National Center for Biotechnology RSE

organism_name: Brucella abortus 82


infraspecific_name: strain=CAIM 1883

organism_name: Vibrio mimicus CAIM 1883


asm_submitter: Pediatric Dentistry, Tokyo Dental College

excluded_from_refseq: unverified source organism; annotation fails completeness check; not used as type

organism_name: Streptococcus intermedius SK54 = ATCC 27335


asm_submitter: Japan Agency for Marine-Earth Science and Technology

organism_name: Sphingobium fuliginis


asm_submitter: National Institute of Infectious Diseases, Japan

organism_name: Aquipseudomonas alcaligenes MRY13-0052


asm_submitter: University of California, Los Angeles

infraspecific_name: strain=DSM 21297

organism_name: Alkalihalophilus marmarensis DSM 21297


asm_submitter: OSDD Open Access Repository

organism_name: Mycobacterium tuberculosis str. OSDD515


asm_submitter: Application of Microorganisms in Agriculture and Allied Sectors

excluded_from_refseq: unverified source organism; annotation fails completeness check; many frameshifted proteins

organism_name: Mesorhizobium ciceri ca181


asm_submitter: Broad Institute

excluded_from_refseq: contaminated

infraspecific_name: strain=BIDMC 19C

organism_name: Escherichia coli BIDMC 19C


asm_submitter: National Centre for Cell Science, Pune - 411007, India

organism_name: Yersinia pestis 9


organism_name: Yersinia pestis 113


organism_name: Yersinia pestis S3


organism_name: Yersinia pestis 24H


asm_name: De Novo assembly

asm_submitter: University of Illinois at Chicago

excluded_from_refseq: contaminated; unverified source organism

organism_name: Alcanivorax sp. PN-3


asm_submitter: MHH

organism_name: Helicobacter pylori SA29C


organism_name: Helicobacter pylori SA216C


organism_name: Helicobacter pylori SA144A


organism_name: Helicobacter pylori SA168C


organism_name: Helicobacter pylori SA156A


organism_name: Helicobacter pylori SA155A


organism_name: Helicobacter pylori SA252A


organism_name: Helicobacter pylori SA163A


organism_name: Helicobacter pylori SA46C


organism_name: Helicobacter pylori SA169C


organism_name: Helicobacter pylori SA210A


organism_name: Helicobacter pylori SA227A


organism_name: Helicobacter pylori SA158A


organism_name: Helicobacter pylori SA224A


organism_name: Helicobacter pylori SA253A


organism_name: Helicobacter pylori SA166A


organism_name: Helicobacter pylori SA144C


organism_name: Helicobacter pylori SA47C


organism_name: Helicobacter pylori SA146C


organism_name: Helicobacter pylori SA161A


organism_name: Helicobacter pylori SA252C


organism_name: Helicobacter pylori SA29A


organism_name: Helicobacter pylori SA30A


organism_name: Helicobacter pylori SA157C


organism_name: Helicobacter pylori SA224C


organism_name: Helicobacter pylori SA40C


organism_name: Helicobacter pylori SA30C


organism_name: Helicobacter pylori SA160C


asm_submitter: University of Arizona

organism_name: Cellulophaga baltica NN016038


organism_name: Helicobacter pylori SA165C


organism_name: Helicobacter pylori SA164A


organism_name: Helicobacter pylori SA222A


organism_name: Helicobacter pylori SA300A


asm_submitter: ebi

organism_name: Kingella kingae KK141


organism_name: Kingella kingae KK88


asm_submitter: Corporacion CorpoGen

organism_name: Bacillus licheniformis CG-B52


asm_submitter: IGS

organism_name: Escherichia coli B28-2


asm_name: Reference Assembly

asm_submitter: Madurai Kamaraj University

excluded_from_refseq: genome length too large; many frameshifted proteins

infraspecific_name: strain=MTCC 8711

organism_name: Limosilactobacillus fermentum MTCC 8711


asm_submitter: Centre for Cellular and Molecular Biology

excluded_from_refseq: contaminated; not used as type

infraspecific_name: strain=CMS 76R

organism_name: Leifsonia rubra CMS 76R


asm_name: Serratia fanticola

asm_submitter: Institute of Microbial Technology

organism_name: Serratia fonticola AU-AP2C


organism_name: Propionibacterium sp. KPL2009


organism_name: Propionibacterium sp. KPL2005


organism_name: Propionibacterium sp. KPL1852


organism_name: Propionibacterium sp. KPL1844


organism_name: Propionibacterium sp. KPL1838


organism_name: Propionibacterium sp. KPL2008


organism_name: Propionibacterium sp. KPL2003


organism_name: Propionibacterium sp. KPL2000


organism_name: Propionibacterium sp. KPL1854


organism_name: Propionibacterium sp. KPL1849


organism_name: Propionibacterium sp. KPL1847


asm_submitter: Arizona State University

infraspecific_name: strain=BL J

organism_name: Lyngbya aestuarii BL J


asm_submitter: BGI Research Institution

organism_name: Enterobacter cancerogenus YZ1


infraspecific_name: strain=Stone 130

organism_name: Pseudomonas aeruginosa str. Stone 130


organism_name: Pseudomonas sp. P179


organism_name: Pseudomonas sp. HPB0071


asm_submitter: Key Laboratory of Desert and Desertification, Cold and Arid Regions Environmental and Engineering Research Institute, Chinese Academy of Sciences

organism_name: Streptomyces thermolilacinus SPC6


asm_submitter: Nofima

organism_name: Latilactobacillus sakei subsp. sakei LS25


asm_submitter: DOE Joint Genome Institute

excluded_from_refseq: derived from single cell; genus undefined

infraspecific_name: strain=SCGC AAA252-B13

organism_name: Latescibacteria bacterium SCGC AAA252-B13


asm_submitter: National Institute for Communicable Disease Control and Prevention,State Key Laboratory for Infectious Disease Prevention and Control

excluded_from_refseq: unverified source organism; annotation fails completeness check

organism_name: Streptococcus suis EA1832.92


asm_submitter: University of Freiburg

infraspecific_name: strain=PCC 6714

organism_name: Synechocystis sp. PCC 6714


asm_submitter: Kyungpook national university

organism_name: Pseudomonas putida SJ3


excluded_from_refseq: annotation fails completeness check; many frameshifted proteins


asm_submitter: School of Pharmacy, Nihon University

excluded_from_refseq: missing strain identifier

organism_name: Candidatus Pantoea carbekii


asm_submitter: Broad Institute

organism_name: Fusobacterium nucleatum CTI-6


organism_name: Fusobacterium nucleatum CTI-5


organism_name: Fusobacterium nucleatum CTI-3


organism_name: Fusobacterium nucleatum CTI-1


asm_submitter: key lab of dairy science, ministry of education, northeast agriculture university

infraspecific_name: strain=KLDS 4.0325

organism_name: Lactococcus lactis subsp. lactis KLDS 4.0325


asm_submitter: JCVI

excluded_from_refseq: many frameshifted proteins

organism_name: Bordetella pertussis H918


organism_name: Bordetella pertussis H921


organism_name: Bordetella pertussis H939


organism_name: Bordetella pertussis STO1-CHLA-0011


organism_name: Bordetella pertussis STO1-CHOC-0017


organism_name: Bordetella pertussis STO1-CHOC-0018


organism_name: Bordetella pertussis STO1-CHOC-0019


organism_name: Bordetella pertussis STO1-CHOM-0012


asm_name: SOAPdenovo

asm_submitter: Directorate of Groundnut Research (Indian Council of Agricultural Research)

organism_name: Priestia megaterium MSP20.1


asm_name: Escherichia coli SCD1

organism_name: Escherichia coli SCD1


asm_name: Escherichia coli SCD2

organism_name: Escherichia coli SCD2


infraspecific_name: strain=SCGC AAA240-J22

organism_name: Gemmatimonadetes bacterium SCGC AAA240-J22


excluded_from_refseq: contaminated; derived from single cell

organism_name: Rhizobacter sp. JGI 0001009-E21


organism_name: Nocardioides sp. JGI 0001009-J09


infraspecific_name: strain=SCGC AAA283-D08

organism_name: Lentisphaerae bacterium SCGC AAA283-D08


excluded_from_refseq: derived from single cell

organism_name: Variovorax sp. JGI 0001020-M05


organism_name: Variovorax sp. JGI 0001013-B23


organism_name: Variovorax sp. JGI 0001016-C20


organism_name: Variovorax sp. JGI 0001014-H11


organism_name: Variovorax sp. JGI 0001020-D06


organism_name: Variovorax sp. JGI 0001011-P21


organism_name: Variovorax sp. JGI 0001016-M12


excluded_from_refseq: genus undefined

infraspecific_name: strain=PSCGC 5451

organism_name: delta proteobacterium PSCGC 5451


infraspecific_name: strain=PSCGC 5342

organism_name: delta proteobacterium PSCGC 5342


infraspecific_name: strain=PSCGC 5296

organism_name: delta proteobacterium PSCGC 5296


organism_name: delta proteobacterium JGI 0000059-O15


organism_name: Variovorax sp. JGI 0001013-M04


organism_name: Burkholderia sp. JGI 0001021-N16


organism_name: Ralstonia sp. JGI 0001001-B07


organism_name: Lysobacteraceae bacterium JGI 0001020-F16


organism_name: Proteobacteria bacterium JGI 0001019-D04


organism_name: Cupriavidus sp. JGI 0001016-D21


organism_name: Rhizobium sp. JGI 0001003-J22


organism_name: Ralstonia sp. JGI 0001001-C06


organism_name: Rhizobium sp. JGI 0001019-L19


organism_name: Rhizobium sp. JGI 0001003-A11


organism_name: beta proteobacterium JGI 0001001-A11


organism_name: beta proteobacterium JGI 0001013-N12


organism_name: delta proteobacterium JGI 0002000-E07


asm_submitter: J. Craig Venter Institute

organism_name: Streptococcus pyogenes GA40468


organism_name: Streptococcus pyogenes GA19700


organism_name: Streptococcus pyogenes GA41039


organism_name: Streptococcus pyogenes GA40056


excluded_from_refseq: annotation fails completeness check

organism_name: Streptococcus pyogenes GA40377


organism_name: Streptococcus pyogenes GA03805


organism_name: Streptococcus pyogenes GA41208


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Newport str. WA_14881


organism_name: Salmonella enterica subsp. enterica serovar Newport str. WA_14882


organism_name: Salmonella enterica subsp. enterica serovar Newport str. RI_10P078


organism_name: Salmonella enterica subsp. enterica serovar Newport str. WA_14900


organism_name: Salmonella enterica subsp. enterica serovar Newport str. RI_10P069


organism_name: Salmonella enterica subsp. enterica serovar Agona str. SA-3


organism_name: Salmonella enterica subsp. enterica serovar Agona str. SA-2


organism_name: Salmonella enterica subsp. enterica serovar Newport str. RI_10P079


organism_name: Salmonella enterica subsp. enterica serovar Agona str. 266757-1


organism_name: Salmonella enterica subsp. enterica serovar Senftenberg str. 423984-1


organism_name: Salmonella enterica subsp. enterica serovar Agona str. 432613


organism_name: Salmonella enterica subsp. enterica serovar Agona str. 460004 2-1


organism_name: Salmonella enterica subsp. enterica serovar Agona str. SA-4


organism_name: Salmonella enterica subsp. enterica serovar Agona str. SA-1


organism_name: Salmonella enterica subsp. enterica serovar Agona str. 0322


organism_name: Salmonella enterica subsp. enterica serovar Newport str. VA_R100512570


organism_name: Salmonella enterica subsp. enterica serovar Newport str. VA_R100512572


asm_submitter: Marshall University School of Medicine

organism_name: Pseudomonas aeruginosa PAO1-VE2


asm_submitter: Oak Ridge National Lab

infraspecific_name: strain=DSM 10061

organism_name: Clostridium autoethanogenum DSM 10061


organism_name: Pseudomonas aeruginosa PAO1-VE13


infraspecific_name: strain=EUR3 2.2.2

organism_name: Sporosarcina sp. EUR3 2.2.2


organism_name: Bacteroidetes bacterium JGI 0000119-L22


infraspecific_name: strain=SCGC AAA003-F15

organism_name: Deltaproteobacteria bacterium SCGC AAA003-F15


infraspecific_name: strain=SCGC AAA003-E02

organism_name: Gammaproteobacteria bacterium SCGC AAA003-E02


organism_name: Rhizobacter sp. JGI 0001007-A16


organism_name: Oxalobacteraceae bacterium JGI 0001012-C15


organism_name: Proteobacteria bacterium JGI 0001009-D17


organism_name: Rhizobium sp. JGI 0001011-C22


organism_name: Rhizobium sp. JGI 0001005-L20


organism_name: Pseudomonas sp. JGI 0001012-A11


organism_name: Delftia sp. JGI 0001020-O15


infraspecific_name: strain=SCGC AAA287-I03

organism_name: Euryarchaeota archaeum SCGC AAA287-I03


infraspecific_name: strain=SCGC AAA286-E23

organism_name: Euryarchaeota archaeon SCGC AAA286-E23


infraspecific_name: strain=SCGC AAA287-E17

organism_name: Euryarchaeota archaeum SCGC AAA287-E17


infraspecific_name: strain=SCGC AAA287-N16

organism_name: Euryarchaeota archaeum SCGC AAA287-N16


infraspecific_name: strain=SCGC AAA282-K18

organism_name: Thaumarchaeota archaeon SCGC AAA282-K18


infraspecific_name: strain=SCGC AAA282-C19

organism_name: Planctomycetes bacterium SCGC AAA282-C19


organism_name: Ensifer sp. JGI 0001011-A08


organism_name: Comamonadaceae bacterium JGI 0001013-A16


organism_name: Variovorax sp. JGI 0001014-I04


organism_name: Burkholderia sp. JGI 0001009-M21


organism_name: Amycolatopsis sp. JGI 0001006-E10


organism_name: Rhizobium sp. JGI 0001012-L22


organism_name: delta proteobacterium JGI 0000059-J07


organism_name: delta proteobacterium JGI 0000059-K16


organism_name: Variovorax sp. JGI 0001013-L10


organism_name: Burkholderia sp. JGI 0001009-G23


organism_name: Rhizobium sp. JGI 0001012-J08


organism_name: Bradyrhizobium sp. JGI 0001019-J21


organism_name: Proteobacteria bacterium JGI 0001013-N05


organism_name: Rhizobium sp. JGI 0001002-E20


organism_name: Rhizobium sp. JGI 0001014-F05


organism_name: Bradyrhizobium sp. JGI 0001019-M21


organism_name: Burkholderia sp. JGI 0001021-N20


organism_name: Chitinophagaceae bacterium JGI 0001013-J17


organism_name: Ralstonia sp. JGI 0001001-A05


organism_name: Bacteroidetes bacterium JGI 0001001-A08


organism_name: Chloroflexi bacterium JGI 0002000-F10


organism_name: Candidatus Ancillula trichonymphae ImTpAt


infraspecific_name: strain=SCGC AAA044-D11

organism_name: actinobacterium SCGC AAA044-D11


infraspecific_name: strain=JGI 0001003-A5

organism_name: Burkholderiales bacterium JGI 0001003-A5


excluded_from_refseq: unverified source organism

organism_name: Bacillus sp. NSP22.2


asm_submitter: OARSA, CFSAN

organism_name: Siccibacter turicensis


organism_name: Salmonella enterica subsp. enterica serovar Heidelberg str. SARA35


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium str. ST4581


organism_name: Salmonella enterica subsp. salamae serovar 58:l,z13,z28:z6 str. 00-0163


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. SARA26


organism_name: Salmonella enterica subsp. enterica serovar Paratyphi B str. SARA56


organism_name: Salmonella enterica subsp. indica serovar 6,14,25:z10:1,(2),7 str. 1121


organism_name: Salmonella enterica subsp. houtenae serovar 50:g,z51:- str. 01-0133


infraspecific_name: strain=ATCC 51955

organism_name: Salmonella enterica subsp. enterica serovar Virchow str. ATCC 51955


organism_name: Salmonella enterica subsp. enterica serovar Typhimurium str. SARA13


infraspecific_name: strain=ATCC 8391

organism_name: Salmonella enterica subsp. enterica serovar Thompson str. ATCC 8391


organism_name: Salmonella enterica subsp. enterica serovar Tennessee str. TXSC_TXSC08-21


organism_name: Salmonella enterica subsp. enterica serovar Tennessee str. TXSC_TXSC08-19


infraspecific_name: strain=ATCC 12002

organism_name: Salmonella enterica subsp. enterica serovar Tallahassee str. 0012


infraspecific_name: strain=ATCC 15791

organism_name: Salmonella enterica subsp. enterica serovar Sloterdijk str. ATCC 15791


infraspecific_name: strain=ATCC 43845

organism_name: Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845


organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. JO2008


infraspecific_name: strain=ATCC 10717

organism_name: Salmonella enterica subsp. enterica serovar Rubislaw str. ATCC 10717


organism_name: Salmonella enterica subsp. enterica serovar Paratyphi B str. SARA42


infraspecific_name: strain=ATCC 11511

organism_name: Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 11511


infraspecific_name: strain=ATCC 19945

organism_name: Salmonella enterica subsp. enterica serovar Pullorum str. 19945


infraspecific_name: strain=ATCC 7378

organism_name: Salmonella enterica subsp. enterica serovar Panama str. ATCC 7378


organism_name: Salmonella enterica subsp. enterica serovar Oranienburg str. 0250


organism_name: Salmonella enterica subsp. enterica serovar Meleagridis str. 0047


infraspecific_name: strain=ATCC 49284

organism_name: Salmonella enterica subsp. enterica serovar Minnesota str. ATCC 49284


infraspecific_name: strain=ATCC 51958

organism_name: Salmonella enterica subsp. enterica serovar Mbandaka str. ATCC 51958


organism_name: Salmonella enterica subsp. enterica serovar Muenster str. 420


organism_name: Salmonella enterica subsp. enterica serovar Muenster str. 0315


infraspecific_name: strain=ATCC 9263

organism_name: Salmonella enterica subsp. enterica serovar Kentucky str. ATCC 9263


infraspecific_name: strain=ATCC 10720

organism_name: Salmonella enterica subsp. enterica serovar Inverness str. ATCC 10720


infraspecific_name: strain=ATCC BAA-711

organism_name: Salmonella enterica subsp. enterica serovar Gaminara str. ATCC BAA-711


organism_name: Salmonella enterica subsp. enterica serovar Give


organism_name: Salmonella enterica subsp. enterica serovar Derby str. 626


infraspecific_name: strain=ATCC 11997

organism_name: Salmonella enterica subsp. enterica serovar Chester str. ATCC 11997


organism_name: Salmonella enterica subsp. enterica serovar Cerro str. 818


infraspecific_name: strain=ATCC 10708

organism_name: Salmonella enterica subsp. enterica serovar Choleraesuis str. ATCC 10708


organism_name: Salmonella enterica subsp. enterica serovar Choleraesuis str. 0006


asm_submitter: US Food and Drug Administration

organism_name: Salmonella enterica subsp. enterica serovar Bareilly str. 2780


infraspecific_name: strain=ATCC 51960

organism_name: Salmonella enterica subsp. enterica serovar Albany str. ATCC 51960


infraspecific_name: strain=ATCC BAA-1592

organism_name: Salmonella enterica subsp. enterica serovar Anatum str. ATCC BAA-1592


organism_name: Salmonella enterica subsp. enterica serovar Abony str. 0014


excluded_from_refseq: sequence duplications

organism_name: Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15 str. 01-0170


organism_name: Salmonella enterica subsp. enterica serovar Cubana str. CFSAN001083


excluded_from_refseq: fragmented assembly

organism_name: Salmonella enterica subsp. enterica serovar London str. CFSAN001081


organism_name: Salmonella enterica subsp. enterica serovar Hartford str. CFSAN001075


infraspecific_name: strain=ATCC 35640

organism_name: Salmonella enterica subsp. enterica serovar Abaetetuba str. ATCC 35640


infraspecific_name: strain=SGSC 2518

organism_name: Salmonella enterica subsp. enterica serovar Stanleyville str. CFSAN000624


organism_name: Mucispirillum schaedleri ASF457


asm_submitter: Washington University

excluded_from_refseq: genus undefined; not used as type

infraspecific_name: strain=ATCC 33089

organism_name: Eubacterium brachy ATCC 33089


asm_submitter: State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology

organism_name: Vibrio parahaemolyticus S160


asm_submitter: DOE Joint Genome Institute

organism_name: Proteobacteria bacterium JGI 0001002-H11


organism_name: Firmicutes bacterium ASF500


asm_name: Shigella flexneri II:(3)4,7(8) 1.0

asm_submitter: Korea National Institute of Health

excluded_from_refseq: RefSeq annotation failed; many frameshifted proteins

organism_name: Shigella flexneri II:(3)4,7(8)


infraspecific_name: strain=ATCC BAA-1673

organism_name: Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673


asm_submitter: WTSI

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium str. DT2


asm_submitter: ULB

organism_name: Escherichia coli PMV-1


asm_submitter: IBUN

organism_name: Acinetobacter baumannii 107m


asm_submitter: CEBITEC

organism_name: Acetivibrio thermocellus BC1


excluded_from_refseq: RefSeq annotation failed

organism_name: Salmonella enterica subsp. enterica serovar Typhimurium str. DT104


asm_submitter: National Center for Global Health and Medicine

organism_name: Streptococcus dysgalactiae subsp. equisimilis 167


excluded_from_refseq: contaminated; unverified source organism; derived from single cell

infraspecific_name: strain=JGI 001006-L10

organism_name: Bacillus sp. JGI 001006-L10


infraspecific_name: strain=JGI 001013-G13

organism_name: Burkholderia sp. JGI 001013-G13


asm_name: Cloacimonetes bacterium OTU 2

infraspecific_name: strain=JGI OTU-2

organism_name: Cloacimonetes bacterium JGI OTU-2


asm_name: Cloacimonetes bacterium OTU 1

infraspecific_name: strain=JGI OTU-1

organism_name: Cloacimonetes bacterium JGI OTU-1


asm_name: Hydrogenedentes bacterium OTU 1

organism_name: Candidatus Hydrogenedens terephthalaticus JGI OTU-1


asm_name: Aminicenantes bacterium OTU 1

organism_name: Candidatus Aminicenans sakinawicola JGI OTU-1


asm_name: Aminicenantes bacterium OTU 2

organism_name: Aminicenantes bacterium JGI OTU-2


asm_name: Cloacimonetes bacterium OTU 5

infraspecific_name: strain=JGI OTU-5

organism_name: Cloacimonetes bacterium JGI OTU-5


asm_name: Cloacimonetes bacterium OTU 6

infraspecific_name: strain=JGI OTU-6

organism_name: Cloacimonetes bacterium JGI OTU-6


asm_name: Cloacimonetes bacterium OTU 3

infraspecific_name: strain=JGI OTU-3

organism_name: Cloacimonetes bacterium JGI OTU-3


asm_name: Marinimicrobia bacterium OTU 1

organism_name: Fidelibacterota bacterium JGI OTU-1


asm_name: Aigarchaeota archaeon OTU 4

infraspecific_name: strain=JGI OTU-4

organism_name: Thaumarchaeota archaeon JGI OTU-4


asm_name: Aigarchaeota archaeon OTU 1

organism_name: Candidatus Calditenuaceae archaeon JGI OTU-1


asm_name: Aigarchaeota archaeon OTU 2

organism_name: Thaumarchaeota archaeon JGI OTU-2


asm_name: Aigarchaeota archaeon OTU 3

organism_name: Candidatus Calditenuaceae archaeon JGI OTU-3


asm_name: Geoarchaeota archaeon OTU 1

organism_name: crenarchaeote JGI-OTU-1


asm_name: Calescamantes bacterium OTU 1

organism_name: Candidatus Calescibacterium nevadense OTU 1


asm_name: Fervidibacteria bacterium OTU 1

organism_name: Candidatus Fervidibacter sacchari JGI OTU-1


asm_name: Atribacteria bacterium OTU 1

organism_name: Atribacteria bacterium JGI OTU-1


asm_name: Cloacimonetes bacterium OTU 4

organism_name: Cloacimonetes bacterium JGI OTU-4


asm_name: Marinimicrobia bacterium OTU 2

organism_name: Fidelibacterota bacterium JGI OTU-2


organism_name: Salmonella enterica subsp. enterica serovar Agona str. 400095 18


organism_name: Salmonella enterica subsp. enterica serovar Agona str. 392869-2


organism_name: Salmonella enterica subsp. enterica serovar Agona str. 400095 17


organism_name: Salmonella enterica subsp. enterica serovar Newport str. VA_R100506907


organism_name: Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189


organism_name: Firmicutes bacterium JGI 0000112-L22


organism_name: Firmicutes bacterium JGI 0000112-P22


excluded_from_refseq: contaminated; derived from single cell; genus undefined

organism_name: Chloroflexi bacterium JGI 0000112-G22


excluded_from_refseq: derived from single cell; genus undefined

organism_name: Gemmatimonadetes bacterium JGI 0000112-M07


organism_name: Bacteroidetes bacterium JGI 0000112-P09


organism_name: Deinococcus-Thermus bacterium JGI 0000112-G17


excluded_from_refseq: derived from single cell; genus undefined; low quality sequence

organism_name: Firmicutes bacterium JGI 0000112-J22


organism_name: Fidelibacterota bacterium JGI 0000113-D11


asm_submitter: Institute of Food Research

organism_name: Campylobacter coli 15-537360


asm_submitter: Centro de Investigacion en Alimentacion y Desarrollo, A. C., Coordinacion Culiacan

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Salmonella enterica subsp. enterica serovar Saintpaul str. S-70


asm_submitter: Centro de Investigacion en Alimentacion y Desarrollo A.C. Coordinacion Culiacan

organism_name: Salmonella enterica subsp. enterica serovar Oranienburg str. S-76


asm_submitter: Umea University, Sweden

organism_name: Streptococcus pneumoniae BHN191


asm_submitter: University of California, San Diego

organism_name: Smithella sp. ME-1


asm_name: Y. Fragile RayK31 C400

asm_submitter: University of Oklahoma

organism_name: Youngiibacter fragilis 232.1


asm_name: RPPX

asm_submitter: RWTH Aachen University

organism_name: Pseudomonas putida S12


asm_submitter: Utrecht University

excluded_from_refseq: unverified source organism; not used as type

organism_name: Campylobacter fetus subsp. testudinum 03-427


asm_submitter: UC Davis

excluded_from_refseq: derived from metagenome

organism_name: Desulfofustis sp. PB-SRB1


organism_name: Thiohalocapsa sp. PB-PSB1


asm_submitter: The Institute for Information Transmission Problems

infraspecific_name: strain=GBA 94-10

organism_name: Streptomyces sp. GBA 94-10 4N24


asm_name: Acidilobus sp. MG

asm_submitter: Montana State University

organism_name: uncultured Acidilobus sp. MG


asm_name: Acidilobus sp. CIS

organism_name: uncultured Acidilobus sp. CIS


organism_name: uncultured Acidilobus sp. OSP8


asm_name: Acidilobus sp. JCHS

organism_name: uncultured Acidilobus sp. JCHS


asm_submitter: University of Siena

organism_name: Klebsiella pneumoniae subsp. pneumoniae KKBO-4


asm_submitter: SCELSE

organism_name: Elizabethkingia anophelis NUHP1


asm_submitter: University of California, San Diego, Scripps Institution of Oceanography

excluded_from_refseq: derived from metagenome; genus undefined

organism_name: uncultured archaeon A07HR67


organism_name: uncultured archaeon A07HB70


organism_name: uncultured archaeon A07HN63


organism_name: uncultured archaeon A07HR60


asm_submitter: SANKARA NETHRALAYA, VISION RESEARCH FOUNDATION

organism_name: Pseudomonas aeruginosa VRFPA05


asm_submitter: American Type Culture Collection

excluded_from_refseq: genome length too large

infraspecific_name: strain=ATCC BAA-2192

organism_name: Escherichia coli ATCC BAA-2192


organism_name: Escherichia coli ATCC BAA-2193


asm_name: Assembly DHS01 of Sep 2013

asm_submitter: Hospital of Besancon - France

organism_name: Pseudomonas aeruginosa DHS01


asm_submitter: Observatoire Oceanologique de Banyuls-sur-Mer

excluded_from_refseq: genus undefined

organism_name: Betaproteobacteria bacterium MOLA814


asm_submitter: Department of Microbiology, The Third Military Medical University

organism_name: Pseudomonas aeruginosa PA1


asm_submitter: Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory

organism_name: Methyloglobulus morosus KoM1


organism_name: Serratia sp. DD3


asm_submitter: Los Alamos National Laboratory

excluded_from_refseq: unverified source organism; annotation fails completeness check

organism_name: Enterobacter cloacae S611


asm_name: GS De Novo

asm_submitter: Directorate of Groundnut Research (Indian Council of Agricultural Research)

excluded_from_refseq: unverified source organism

organism_name: Sediminibacillus halophilus NSP9.3


organism_name: Shinella sp. DD12


asm_submitter: Institute of Microbiology, Chinese Academy of Sciences

excluded_from_refseq: annotation fails completeness check

organism_name: Escherichia coli CE418


asm_submitter: CSIR-Institute of Genomics and Integrative Biology

infraspecific_name: strain=NCIM 2477

organism_name: Sporosarcina pasteurii NCIM 2477


asm_submitter: Laboratory of Bacterial Genomics, Pathogen Genomic Center, National Institute of Infectious Diseases

infraspecific_name: strain=JCM 15300

organism_name: Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300


asm_submitter: Norwegian University of Science and Technology

organism_name: Streptomycetaceae bacterium MP113-05


asm_submitter: Institut Pasteur

organism_name: Helicobacter pylori X47-2AL


asm_submitter: Armed Forces Research Institute of Medical Sciences U.S. Army Medical Component Department of Enteric Diseases

excluded_from_refseq: many frameshifted proteins

organism_name: Shigella dysenteriae 1617


excluded_from_refseq: derived from single cell; genome length too small

infraspecific_name: strain=CFH

organism_name: Lactobacillus acidophilus CFH


asm_submitter: University of Notre Dame

organism_name: gamma proteobacterium L18


asm_name: version 3 of Proteus hauseri genome

asm_submitter: Xiamen University

organism_name: Proteus hauseri ZMd44


asm_submitter: University of Florence

organism_name: Pseudoalteromonas sp. TB13


asm_name: Burkholderia cenocepacia KC-01

asm_submitter: Institute of Microbial Technology

excluded_from_refseq: genome length too small

organism_name: Burkholderia cenocepacia KC-01


asm_submitter: Cornell University

organism_name: Escherichia coli ECA-0157


organism_name: Escherichia coli ECA-727


organism_name: Escherichia coli ECC-1470


asm_name: Acinetobacter baumannii DU202

asm_submitter: Korea Basic Science Institute

organism_name: Acinetobacter baumannii DU202


asm_name: Pseudomonas putida S13.1.2

asm_submitter: UNIVERSITY OF MALAYA

organism_name: Pseudomonas putida S13.1.2


organism_name: Pseudomonas taeanensis MS-3


asm_submitter: Ankara University Biotechnology Institute

organism_name: Bacillus sp. 17376


asm_submitter: Lebanese American University

organism_name: Klebsiella pneumoniae LAU-KP1


organism_name: Escherichia coli LAU-EC2


organism_name: Escherichia coli LAU-EC3


organism_name: Escherichia coli LAU-EC4


organism_name: Escherichia coli LAU-EC5


organism_name: Streptococcus pyogenes SP1-LAU


asm_submitter: Shanghai Majorbio

infraspecific_name: strain=DSM 21115

organism_name: Lactiplantibacillus fabifermentans DSM 21115


asm_submitter: Kyungpook national university

organism_name: Pseudomonas mosselii SJ10


asm_submitter: J. Craig Venter Institute

organism_name: Streptococcus pyogenes GA03455


organism_name: Streptococcus pyogenes GA03747


organism_name: Streptococcus pyogenes GA16797


organism_name: Streptococcus pyogenes GA03799


organism_name: Streptococcus pyogenes GA40884


asm_submitter: Scientific Research Institute of Physical-Chemical Medicine

organism_name: Helicobacter pylori H13-1


organism_name: Helicobacter pylori E48


asm_submitter: UMENT

infraspecific_name: strain=IrR/Munich

organism_name: Rickettsia monacensis IrR/Munich


asm_submitter: HOSPICES CIVILS DE LYON

organism_name: Staphylococcus capitis CR01


asm_name: Methanobacterium

excluded_from_refseq: RefSeq annotation failed; missing strain identifier

organism_name: Methanobacterium sp. MB1


asm_submitter: Federal University of Para

organism_name: Corynebacterium ulcerans FRC58


asm_name: Methylocystis strain SB2

asm_submitter: University of Michigan

organism_name: Methylocystis sp. SB2


asm_name: 1st assembly

asm_submitter: Universita Cattolica del Sacro Cuore

organism_name: Enterococcus faecium UC7256


asm_submitter: Robert Koch Institute

infraspecific_name: strain=MAH 27-1

organism_name: Mycobacterium avium subsp. hominissuis MAH 27-1


asm_submitter: IGS

organism_name: Vibrio parahaemolyticus 10296


asm_submitter: Queensland Department of Health

organism_name: Legionella pneumophila W1046


asm_name: Bacillus sp. strain RP1137

asm_submitter: Institute of Marine and Environmental Technology

organism_name: Bacillus sp. RP1137


asm_submitter: Institute for Genome Sciences


asm_submitter: The Chinese University of Hong Kong

organism_name: Vibrio parahaemolyticus VIP4-0445


excluded_from_refseq: contaminated

organism_name: Vibrio parahaemolyticus VIP4-0430


organism_name: Vibrio parahaemolyticus VIP4-0443


asm_name: Bacillus thuringiensis strain LM1212

asm_submitter: Institute of Plant Protection, CAAS

organism_name: Bacillus thuringiensis LM1212


asm_name: Streptomyces sp. GXT6 version 1

asm_submitter: State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, Guangxi University

organism_name: Streptomyces sp. GXT6


organism_name: Vibrio parahaemolyticus 12310


asm_submitter: Universidade Federal do Para

excluded_from_refseq: annotation fails MAG completeness check; derived from metagenome

organism_name: Rhodobacter sp. CACIA14H1


asm_submitter: Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris

organism_name: Borreliella garinii IPT74


organism_name: Borreliella garinii IPT94


organism_name: Borreliella garinii IPT96


organism_name: Borreliella garinii IPT104


organism_name: Borreliella garinii IPT124


organism_name: Borreliella garinii IPT131


organism_name: Borreliella garinii IPT134


organism_name: Borreliella burgdorferi IPT2


organism_name: Borreliella burgdorferi IPT23


organism_name: Borreliella burgdorferi IPT26


organism_name: Borreliella burgdorferi IPT35


organism_name: Borreliella burgdorferi IPT51


organism_name: Borreliella burgdorferi IPT61


organism_name: Borreliella burgdorferi IPT137


organism_name: Borreliella garinii IPT75


organism_name: Borreliella garinii IPT76


organism_name: Borreliella garinii IPT88


organism_name: Borreliella garinii IPT89


organism_name: Borreliella garinii IPT105


organism_name: Borreliella garinii IPT108


organism_name: Borreliella garinii IPT120


organism_name: Borreliella garinii IPT130


organism_name: Borreliella garinii IPT139


organism_name: Borreliella burgdorferi IPT24


organism_name: Borreliella burgdorferi IPT87


organism_name: Borreliella burgdorferi IPT92


organism_name: Borreliella burgdorferi IPT93


organism_name: Borreliella burgdorferi IPT132


organism_name: Borreliella burgdorferi IPT141


asm_submitter: University of Southern California

organism_name: Mesorhizobium sp. L2C054A000


organism_name: Mesorhizobium sp. LNHC220B00


organism_name: Mesorhizobium sp. LSHC416B00


organism_name: Mesorhizobium sp. LSHC424B00


organism_name: Mesorhizobium sp. LSJC277A00


asm_submitter: University of New Hampshire

organism_name: Frankia sp. CcI6


asm_name: Bcereus

asm_submitter: University of Sao Paulo - Escola Superior de Agricultura Luiz de Queiroz

organism_name: Bacillus thuringiensis JM-Mgvxx-63


asm_submitter: University of California, Berkeley

excluded_from_refseq: derived from metagenome; genus undefined; low gene count

organism_name: candidate division WWE3 bacterium RAAC2_WWE3_1


excluded_from_refseq: derived from environmental source; genus undefined

organism_name: candidate division SR1 bacterium RAAC1_SR1_1


organism_name: Candidatus Saccharibacteria bacterium RAAC3_TM7_1


asm_submitter: Louisiana State University

excluded_from_refseq: fragmented assembly; low quality sequence

organism_name: Burkholderia glumae 336gr-1


asm_name: SOAPdenovo for version2.04 of Bacillus sp. FJAT-14578 genome

asm_submitter: Fujian academy of agricultural sciences

organism_name: Bacillus sp. FJAT-14578


asm_name: Rhodobacteraceae bacterium PD-2, version 1.0

asm_submitter: First Institute of Oceanography, SOA

organism_name: Rhodobacteraceae bacterium PD-2


asm_name: Rhodopseudomonas palustris JSC-3b

asm_submitter: Hunan Plant Protection Institute

organism_name: Rhodopseudomonas palustris JSC-3b


asm_name: NGEN (DNA Star)

asm_submitter: Gateway Technical College

excluded_from_refseq: RefSeq annotation failed; annotation fails completeness check; many frameshifted proteins

organism_name: Lactococcus garvieae TRF1


asm_submitter: University of malaya

organism_name: Pandoraea pnomenusa


asm_submitter: JGI

excluded_from_refseq: derived from single cell; genus undefined

infraspecific_name: strain=SCGC AAA288-E13

organism_name: alpha proteobacterium SCGC AAA288-E13


infraspecific_name: strain=SCGC AAA240-E13

organism_name: alpha proteobacterium SCGC AAA240-E13


asm_submitter: DOE Joint Genome Institute

infraspecific_name: strain=SCGC AAA041-L13

organism_name: actinobacterium SCGC AAA041-L13


asm_submitter: The Genome Institute

organism_name: Salmonella enterica subsp. enterica serovar Cubana str. 76814


asm_name: MAP 8281 version 1

asm_submitter: National Animal Disease Center

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Mycobacterium avium subsp. paratuberculosis 08-8281


asm_name: MAA 4293 version 1

organism_name: Mycobacterium avium 05-4293


asm_name: MAH 4249 version 1

organism_name: Mycobacterium avium subsp. hominissuis 10-4249


asm_name: MAP 4404 version 1

organism_name: Mycobacterium avium subsp. paratuberculosis 10-4404


asm_name: MAC 5581 version 1

organism_name: Mycobacterium avium 10-5581


asm_name: MAH 5606 version 1

organism_name: Mycobacterium avium subsp. hominissuis 10-5606


asm_name: MAP 5864 version 1

organism_name: Mycobacterium avium subsp. paratuberculosis 10-5864


asm_name: MAP 5975 version 1

organism_name: Mycobacterium avium subsp. paratuberculosis 10-5975


asm_name: MAP 8425 version 1

excluded_from_refseq: fragmented assembly

organism_name: Mycobacterium avium subsp. paratuberculosis 10-8425


asm_name: MAC 0986 version 1

organism_name: Mycobacterium avium 11-0986


organism_name: Mycobacterium avium 09-5983


organism_name: Mycobacterium avium subsp. avium 10-9275


asm_name: MAS 49884 version 1

infraspecific_name: strain=ATCC 49884

organism_name: Mycobacterium avium subsp. silvaticum ATCC 49884


asm_name: MAP 1786 version 1

organism_name: Mycobacterium avium subsp. paratuberculosis 11-1786


asm_name: MAA 4751 version 1

organism_name: Mycobacterium avium subsp. avium 11-4751


excluded_from_refseq: derived from metagenome; genus undefined

organism_name: Parcubacteria bacterium RAAC4_OD1_1


asm_submitter: FDA

organism_name: Salmonella enterica subsp. enterica serovar Cerro str. 5569


organism_name: Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001588


organism_name: Salmonella enterica subsp. enterica serovar Give var. 15 str. CFSAN004343


organism_name: Salmonella enterica subsp. enterica serovar Muenster str. CFSAN004344


asm_name: E. faecalis PF3 draft genome

asm_submitter: Queensland University of Technology

organism_name: Enterococcus faecalis PF3


asm_submitter: Saurashtra University

organism_name: Pseudomonas aeruginosa PFK10


organism_name: Pseudomonas aeruginosa PK6


asm_submitter: University of California

organism_name: Salmonella enterica subsp. enterica serovar Cubana str. 76814


asm_submitter: University of Ottawa

organism_name: Pseudomonas aeruginosa JD303


organism_name: Pseudomonas aeruginosa JD304


organism_name: Pseudomonas aeruginosa JD310


organism_name: Pseudomonas aeruginosa JD312


organism_name: Pseudomonas aeruginosa JD318


organism_name: Pseudomonas aeruginosa JD317


organism_name: Pseudomonas aeruginosa JD320


organism_name: Pseudomonas aeruginosa JD324


organism_name: Pseudomonas aeruginosa JD325


organism_name: Pseudomonas aeruginosa JD329


organism_name: Pseudomonas aeruginosa JD334


asm_submitter: University of British Columbia

organism_name: Rhodobacter capsulatus B6


asm_name: WGS Escherichia coli EC6

asm_submitter: Lebanese American University

organism_name: Escherichia coli LAU-EC6


asm_name: WGS Escherichia coli EC7

organism_name: Escherichia coli LAU-EC7


asm_name: WGS Escherichia coli EC9

organism_name: Escherichia coli LAU-EC9


organism_name: Rhodobacter capsulatus YW1


organism_name: Rhodobacter capsulatus YW2


organism_name: Rhodobacter capsulatus R121


asm_name: WGS Escherichia coli EC8

organism_name: Escherichia coli LAU-EC8


asm_submitter: Research Institute of Physical-Chemical Medicine, Moscow, Russia

organism_name: Streptococcus pneumoniae 13856


organism_name: Streptococcus pneumoniae 1719


organism_name: Streptococcus pneumoniae 27


organism_name: Streptococcus pseudopneumoniae G42


asm_submitter: Department of Biomedical Engineering, Brno University of Technology

infraspecific_name: strain=NRRL B-598

organism_name: Clostridium beijerinckii NRRL B-598


asm_submitter: Department of Biotechnology, Institute of Chemical Technology Prague


asm_name: X. fastidiosa 6c

asm_submitter: Universidade de Mogi das Cruzes

organism_name: Xylella fastidiosa 6c


organism_name: Rhodobacter capsulatus Y262


asm_submitter: KRIBB

infraspecific_name: strain=KCTC 12500

organism_name: Pseudomonas syringae KCTC 12500


asm_submitter: Agriculture and Agri-Food Canada

organism_name: Paenibacillus polymyxa CR1


organism_name: Bacillus velezensis


organism_name: Bacillus pumilus INR7


asm_submitter: Institute of Microbiology, Chinese Academy of Sciences

excluded_from_refseq: misassembled; not used as type

infraspecific_name: strain=NBRC 15126 = ATCC 27061

organism_name: Achromobacter xylosoxidans NBRC 15126 = ATCC 27061


asm_submitter: Center for Genomic Sciences

infraspecific_name: strain=SUSAZ

organism_name: Sulfolobus acidocaldarius SUSAZ


asm_submitter: University of Ghent

infraspecific_name: strain=LMG 21834

organism_name: Neobacillus vireti LMG 21834


asm_submitter: University of California, Berkeley

excluded_from_refseq: derived from metagenome; fragmented assembly

organism_name: Actinomyces urogenitalis DORA_12


excluded_from_refseq: derived from metagenome; genome length too small

organism_name: Intestinibacter bartlettii DORA_8_9


excluded_from_refseq: derived from metagenome

organism_name: Clostridium butyricum DORA_1


excluded_from_refseq: unverified source organism; derived from metagenome; fragmented assembly; partial

genome_rep: Partial

organism_name: Escherichia coli DORA_B_14


organism_name: Streptococcus anginosus DORA_7


excluded_from_refseq: derived from metagenome; fragmented assembly; genome length too large

organism_name: Streptococcus parasanguinis DORA_23_24


organism_name: Veillonella dispar DORA_11


organism_name: Streptococcus sp. DORA_10


organism_name: Escherichia coli DORA_A_5_14_21


organism_name: Enterococcus faecalis DORA_14


organism_name: Staphylococcus sp. DORA_6_22


asm_submitter: The University of Tokyo

excluded_from_refseq: genus undefined

organism_name: Clostridiales bacterium VE202-01


organism_name: Clostridiales bacterium VE202-03


excluded_from_refseq: contaminated

organism_name: Hungatella hathewayi VE202-04


organism_name: Clostridiales bacterium VE202-06


excluded_from_refseq: unverified source organism; genus undefined

organism_name: Clostridiales bacterium VE202-07


organism_name: Clostridiales bacterium VE202-08


organism_name: Clostridiales bacterium VE202-09


organism_name: Clostridiales bacterium VE202-13


excluded_from_refseq: contaminated; unverified source organism; genus undefined

organism_name: Clostridiales bacterium VE202-14


organism_name: Clostridiales bacterium VE202-15


organism_name: Clostridiales bacterium VE202-16


organism_name: Clostridiales bacterium VE202-18


organism_name: Clostridiales bacterium VE202-21


organism_name: Clostridiales bacterium VE202-26


organism_name: Clostridiales bacterium VE202-27


organism_name: Clostridiales bacterium VE202-28


organism_name: Clostridiales bacterium VE202-29


asm_submitter: Okinawa Institute of Science and Technology

infraspecific_name: strain=Mf 1.05b.01

organism_name: Parvibaculaceae bacterium Mf 1.05b.01


asm_submitter: Osaka City University

excluded_from_refseq: annotation fails completeness check

organism_name: Mycobacterium tuberculosis OM-V02_005


asm_submitter: National Institute of Infectious Diseases, Japan

excluded_from_refseq: RefSeq annotation failed; many frameshifted proteins

organism_name: Acinetobacter baumannii MRY09-0642


organism_name: Acinetobacter baumannii MRY12-0277


asm_submitter: National Institute of Advanced Industrial Science and Technology (AIST)

excluded_from_refseq: unverified source organism; RefSeq annotation failed

infraspecific_name: strain=NBRC 103465

organism_name: Gluconobacter frateurii NBRC 103465


asm_submitter: University of Michigan

organism_name: Campylobacter jejuni subsp. jejuni 81-176-DRH212


asm_submitter: The Ohio State University

excluded_from_refseq: derived from single cell

isolate: Cell 2

organism_name: Tannerella sp. oral taxon BU063 isolate Cell 2


asm_submitter: JCVI

excluded_from_refseq: genus undefined; not used as type

infraspecific_name: strain=ATCC 33099

organism_name: Eubacterium nodatum ATCC 33099


isolate: Cell 5

organism_name: Tannerella sp. oral taxon BU063 isolate Cell 5


organism_name: Tannerella sp. oral taxon BU063 isolate Cell 6/7/9


isolate: Cell 1/3

organism_name: Tannerella sp. oral taxon BU063 isolate Cell 1/3


isolate: Cell 8/11

organism_name: Tannerella sp. oral taxon BU063 isolate Cell 8/11


asm_submitter: IGS

organism_name: Vibrio parahaemolyticus EKP-008


organism_name: Vibrio parahaemolyticus 970107


asm_submitter: DOE Joint Genome Institute

excluded_from_refseq: unverified source organism

organism_name: Lacticaseibacillus casei A2-362


asm_submitter: JGI

excluded_from_refseq: derived from single cell; genus undefined

infraspecific_name: strain=SCGC AAA028-D10

organism_name: alpha proteobacterium SCGC AAA028-D10


asm_submitter: University of Exeter

organism_name: Pseudomonas sp. FH1


organism_name: Pseudomonas sp. FH4


asm_name: HMscaffold

asm_submitter: Institut Pasteur Montevideo

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

infraspecific_name: strain=HM

organism_name: Mycobacterium tuberculosis HM


asm_submitter: LAPTOP

infraspecific_name: strain=ATCC PTA-5024

organism_name: Microbispora sp. ATCC PTA-5024


organism_name: Pseudomonas fluorescens FH5


asm_name: SSPACE

asm_submitter: Institut des Sciences du vegetal

organism_name: Dickeya solani RNS 08.23.3.1.A


excluded_from_refseq: many frameshifted proteins

infraspecific_name: strain=JCM 6292

organism_name: Bacteroides pyogenes JCM 6292


infraspecific_name: strain=JCM 6294

organism_name: Bacteroides pyogenes DSM 20611 = JCM 6294


excluded_from_refseq: low quality sequence; not used as type

infraspecific_name: strain=JCM 10003

organism_name: Bacteroides pyogenes JCM 10003


organism_name: Campylobacter jejuni subsp. jejuni 81-176-UMCW9


asm_submitter: Observatoire Oceanologique de Banyuls-sur-Mer

organism_name: Gammaproteobacteria bacterium MOLA455


asm_name: CLCbio CLC Genomics Workbench 5.5

asm_submitter: School of Biological Sciences, Chung-Ang University

organism_name: Zhouia amylolytica AD3


asm_submitter: Tsinghua University

organism_name: Aeromonas hydrophila 4AK4


asm_submitter: Nankai University

organism_name: Sphingomonas sanxanigenens DSM 19645 = NX02


asm_name: GS De Novo Assembly

asm_submitter: National Environmental Engineering Research Institute-CSIR

organism_name: Morganella sp. EGD-HP17


asm_submitter: School of Life Sciences, Manipal University

organism_name: Staphylococcus aureus MUM475


asm_submitter: University of Utah

excluded_from_refseq: derived from metagenome

organism_name: Candidatus Xenolissoclinum pacificiensis L6


asm_submitter: Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences

organism_name: Pseudomonas sp. QTF5


asm_submitter: Utrecht University

organism_name: Campylobacter fetus subsp. venerealis cfvi03/293


asm_submitter: Beijing Genomics Institute

organism_name: Bacillus anthracis str. A16R


organism_name: Bacillus anthracis str. A16


infraspecific_name: strain=SCGC AAA288-N07

organism_name: alpha proteobacterium SCGC AAA288-N07


infraspecific_name: strain=SCGC AAA288-G21

organism_name: alpha proteobacterium SCGC AAA288-G21


asm_submitter: CeBiTec

excluded_from_refseq: RefSeq annotation failed; missing rRNA genes; missing tRNA genes

organism_name: Erwinia amylovora LA637


asm_submitter: AIT

organism_name: Escherichia coli IS5


excluded_from_refseq: missing rRNA genes; missing tRNA genes

organism_name: Erwinia amylovora LA636


organism_name: Erwinia amylovora LA635


organism_name: Escherichia coli IS1


asm_submitter: Zhejiang University

excluded_from_refseq: genome length too large

organism_name: Staphylococcus cohnii hu-01


asm_name: Lachnospiraceae sp. JC7 draft genome

asm_submitter: Commonwealth Scientific and Industrial Research Organisation

excluded_from_refseq: genus undefined

organism_name: Lachnospiraceae bacterium JC7


asm_name: gabuh0207 v01

asm_submitter: J. Craig Venter Institute

organism_name: Acinetobacter baumannii UH0207


asm_submitter: DOE Joint Genome Institute

organism_name: Ensifer sp. WSM1721


organism_name: Streptomyces griseolus


excluded_from_refseq: contaminated

organism_name: Streptomyces sp. KhCrAH-337


organism_name: Streptomyces sp. KhCrAH-40


infraspecific_name: strain=DSM 4024

organism_name: Lacrimispora sphenoides DSM 4024


organism_name: Pseudomonas sp. URMO17WK12:I4


organism_name: Pseudomonas sp. URMO17WK12:I3


organism_name: Salinispora pacifica CNT003


organism_name: Streptomyces sp. CNH099


organism_name: Salinispora arenicola CNQ748


organism_name: Burkholderia sp. JPY366


asm_name: gabuh8907 v01

organism_name: Acinetobacter baumannii UH8907


asm_name: gabuh9007 v01

organism_name: Acinetobacter baumannii UH9007


asm_name: gabuh5707 v01

organism_name: Acinetobacter baumannii UH5707


asm_name: gabuh6107 v01

organism_name: Acinetobacter baumannii UH6107


asm_name: gabuh7707 v01

organism_name: Acinetobacter baumannii UH7707


asm_name: gabuh7807 v01

organism_name: Acinetobacter baumannii UH7807


asm_submitter: LNCC

excluded_from_refseq: derived from metagenome; fragmented assembly

infraspecific_name: strain=Araruama

isolate: Araruama

organism_name: Candidatus Magnetoglobus multicellularis str. Araruama


asm_submitter: University of Texas at San Antonio

organism_name: Acinetobacter baumannii CI86


organism_name: Acinetobacter baumannii CI77


organism_name: Acinetobacter lactucae


organism_name: Acinetobacter baumannii CI79


asm_submitter: Queensland University of Technology

organism_name: Chlamydia pneumoniae B21


asm_submitter: IGS

organism_name: Vibrio parahaemolyticus B-265


asm_submitter: JGI

excluded_from_refseq: fragmented assembly; low quality sequence; not used as type

organism_name: Microvirga lupini


asm_name: gabuh2107 v01

organism_name: Acinetobacter baumannii UH2107


excluded_from_refseq: unverified source organism; not used as type

organism_name: Desulfurella acetivorans A63


asm_submitter: Oak Ridge National Laboratory

infraspecific_name: strain=ATCC 21198

organism_name: Rhodococcus rhodochrous ATCC 21198


asm_submitter: JCVI

organism_name: Fusobacterium sp. CM21


asm_submitter: CIB-CSIC

organism_name: Pseudomonas nitroreducens HBP1


organism_name: Rhodospirillales bacterium URHD0088


excluded_from_refseq: contaminated; unverified source organism

organism_name: Alcanivorax sp. 43B_GOM-46m


organism_name: Olleya sp. VCSA23


organism_name: Olleya sp. VCSM12


excluded_from_refseq: RefSeq annotation failed

infraspecific_name: strain=ATCC 12775

organism_name: Phaseolibacter flectens ATCC 12775


organism_name: Bacillus sp. J37


organism_name: Bacillus sp. J13


excluded_from_refseq: annotation fails completeness check; genome length too small

organism_name: Shewanella putrefaciens HRCR-6


excluded_from_refseq: unverified source organism

organism_name: Burkholderia sp. UYPR1.413


organism_name: Vibrio parahaemolyticus 605


organism_name: Vibrio parahaemolyticus 50


organism_name: Vibrio parahaemolyticus 3256


asm_submitter: UNIVERSITY OF MALAYA

organism_name: Chania multitudinisentens RB-25


asm_submitter: Tokyo Institute of Technology

infraspecific_name: strain=DSM 1374

organism_name: Rhodovulum sulfidophilum DSM 1374


asm_submitter: Broad Institute

excluded_from_refseq: annotation fails completeness check

organism_name: Pseudomonas aeruginosa BWHPSA048


asm_submitter: China Agricultural University

organism_name: Paenibacillus sophorae S27


organism_name: Rhizobium leguminosarum bv. trifolii CB782


asm_submitter: McGill University Mycobacterium genome consortium

excluded_from_refseq: contaminated; not used as type

infraspecific_name: strain=Wayne

organism_name: Mycobacterium gastri 'Wayne'


asm_submitter: Scottish Association for Marine Science

organism_name: Labrenzia sp. DG1229


asm_submitter: NARO Institute of Fruit Tree Science (NIFTS), National Agriculture and Food Research Organization (NARO)

excluded_from_refseq: annotation fails completeness check; many frameshifted proteins

organism_name: Xanthomonas arboricola pv. pruni MAFF 301420


asm_submitter: The University of Tokyo

infraspecific_name: strain=JCM 18909

organism_name: Cutibacterium acnes JCM 18909


infraspecific_name: strain=JCM 18916

organism_name: Cutibacterium acnes JCM 18916


infraspecific_name: strain=JCM 18918

organism_name: Cutibacterium acnes JCM 18918


infraspecific_name: strain=JCM 18920

organism_name: Cutibacterium acnes JCM 18920


organism_name: Vibrio parahaemolyticus IDH02640


organism_name: Vibrio parahaemolyticus EKP-028


organism_name: Vibrio parahaemolyticus IDH02189