{
"cells": [
{
"cell_type": "markdown",
"metadata": {},
"source": [
"# List Formats in Production\n",
"\n",
"**Task:** Connect to the DataONE production environment, retrieve the list of Object formats, and print out the list as a table.\n"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"First, load the `dataone` R package:\n"
]
},
{
"cell_type": "code",
"execution_count": 1,
"metadata": {},
"outputs": [],
"source": [
"library(dataone)"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"Establish a connection to the CN in production environment:\n"
]
},
{
"cell_type": "code",
"execution_count": 2,
"metadata": {},
"outputs": [],
"source": [
"cn <- CNode() # See ?CNode for other environments"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"List the formats in that environment with `listFormats`:\n"
]
},
{
"cell_type": "code",
"execution_count": 3,
"metadata": {},
"outputs": [
{
"data": {
"text/html": [
"<table>\n",
"<caption>A data.frame: 134 × 5</caption>\n",
"<thead>\n",
"\t<tr><th scope=col>ID</th><th scope=col>Name</th><th scope=col>Type</th><th scope=col>MediaType</th><th scope=col>Extension</th></tr>\n",
"\t<tr><th scope=col><chr></th><th scope=col><chr></th><th scope=col><chr></th><th scope=col><chr></th><th scope=col><chr></th></tr>\n",
"</thead>\n",
"<tbody>\n",
"\t<tr><td>eml://ecoinformatics.org/eml-2.0.0 </td><td>Ecological Metadata Language, version 2.0.0 </td><td>METADATA</td><td>text/xml </td><td>xml </td></tr>\n",
"\t<tr><td>eml://ecoinformatics.org/eml-2.0.1 </td><td>Ecological Metadata Language, version 2.0.1 </td><td>METADATA</td><td>text/xml </td><td>xml </td></tr>\n",
"\t<tr><td>eml://ecoinformatics.org/eml-2.1.0 </td><td>Ecological Metadata Language, version 2.1.0 </td><td>METADATA</td><td>text/xml </td><td>xml </td></tr>\n",
"\t<tr><td>eml://ecoinformatics.org/eml-2.1.1 </td><td>Ecological Metadata Language, version 2.1.1 </td><td>METADATA</td><td>text/xml </td><td>xml </td></tr>\n",
"\t<tr><td>https://eml.ecoinformatics.org/eml-2.2.0 </td><td>Ecological Metadata Language, version 2.2.0 </td><td>METADATA</td><td>text/xml </td><td>xml </td></tr>\n",
"\t<tr><td>http://www.esri.com/metadata/esriprof80.dtd </td><td>ESRI Profile of the Content Standard for Digital Geospatial Metadata, March 2003 </td><td>METADATA</td><td>text/xml </td><td>xml </td></tr>\n",
"\t<tr><td>FGDC-STD-001.1-1999 </td><td>Content Standard for Digital Geospatial Metadata, Biological Data Profile, version 001.1-1999 </td><td>METADATA</td><td>text/xml </td><td>xml </td></tr>\n",
"\t<tr><td>FGDC-STD-001.2-1999 </td><td>Content Standard for Digital Geospatial Metadata, Metadata Profile for Shoreline Data, version 001.2-1999</td><td>METADATA</td><td>text/xml </td><td>xml </td></tr>\n",
"\t<tr><td>FGDC-STD-001-1998 </td><td>Content Standard for Digital Geospatial Metadata, version 001-1998 </td><td>METADATA</td><td>text/xml </td><td>xml </td></tr>\n",
"\t<tr><td>INCITS-453-2009 </td><td>North American Profile of ISO 19115: 2003 Geographic Information - Metadata </td><td>METADATA</td><td>text/xml </td><td>xml </td></tr>\n",
"\t<tr><td>http://www.unidata.ucar.edu/namespaces/netcdf/ncml-2.2</td><td>NetCDF Markup Language, version 2.2 </td><td>METADATA</td><td>application/netcdf</td><td>nc </td></tr>\n",
"\t<tr><td>CF-1.0 </td><td>NetCDF Climate and Forecast Metadata Convention, version 1.0 </td><td>DATA </td><td>application/netcdf</td><td>nc </td></tr>\n",
"\t<tr><td>CF-1.1 </td><td>NetCDF Climate and Forecast Metadata Convention, version 1.1 </td><td>DATA </td><td>application/netcdf</td><td>nc </td></tr>\n",
"\t<tr><td>CF-1.2 </td><td>NetCDF Climate and Forecast Metadata Convention, version 1.2 </td><td>DATA </td><td>application/netcdf</td><td>nc </td></tr>\n",
"\t<tr><td>CF-1.3 </td><td>NetCDF Climate and Forecast Metadata Convention, version 1.3 </td><td>DATA </td><td>application/netcdf</td><td>nc </td></tr>\n",
"\t<tr><td>CF-1.4 </td><td>NetCDF Climate and Forecast Metadata Convention, version 1.4 </td><td>DATA </td><td>application/netcdf</td><td>nc </td></tr>\n",
"\t<tr><td>http://www.cuahsi.org/waterML/1.0/ </td><td>Water Markup Language, version 1.0 </td><td>METADATA</td><td>text/xml </td><td>xml </td></tr>\n",
"\t<tr><td>http://www.cuahsi.org/waterML/1.1/ </td><td>Water Markup Language, version 1.0 </td><td>METADATA</td><td>text/xml </td><td>xml </td></tr>\n",
"\t<tr><td>http://www.loc.gov/METS/ </td><td>Metadata Encoding and Transmission Standard, version 1 </td><td>METADATA</td><td>text/xml </td><td>xml </td></tr>\n",
"\t<tr><td>netCDF-3 </td><td>Network Common Data Format, version 3 </td><td>DATA </td><td>application/netcdf</td><td>nc </td></tr>\n",
"\t<tr><td>netCDF-4 </td><td>Network Common Data Format, version 4 </td><td>DATA </td><td>application/netcdf</td><td>nc </td></tr>\n",
"\t<tr><td>text/plain </td><td>Plain Text </td><td>DATA </td><td>text/plain </td><td>txt </td></tr>\n",
"\t<tr><td>text/csv </td><td>Comma Separated Values Text </td><td>DATA </td><td>text/csv </td><td>csv </td></tr>\n",
"\t<tr><td>image/bmp </td><td>Bitmap Image File </td><td>DATA </td><td>image/bmp </td><td>bmp </td></tr>\n",
"\t<tr><td>image/gif </td><td>Graphics Interchange Format </td><td>DATA </td><td>image/gif </td><td>gif </td></tr>\n",
"\t<tr><td>image/jp2 </td><td>JPEG 2000 </td><td>DATA </td><td>image/jp2 </td><td>jpg </td></tr>\n",
"\t<tr><td>image/jpeg </td><td>JPEG </td><td>DATA </td><td>image/jpeg </td><td>jpg </td></tr>\n",
"\t<tr><td>image/png </td><td>Portable Network Graphics </td><td>DATA </td><td>image/png </td><td>png </td></tr>\n",
"\t<tr><td>image/svg+xml </td><td>Scalable Vector Graphics </td><td>DATA </td><td>image/svg+xml </td><td>svg </td></tr>\n",
"\t<tr><td>image/tiff </td><td>Tagged Image File Format </td><td>DATA </td><td>image/tiff </td><td>tiff</td></tr>\n",
"\t<tr><td>⋮</td><td>⋮</td><td>⋮</td><td>⋮</td><td>⋮</td></tr>\n",
"\t<tr><td>http://www.icpsr.umich.edu/DDI </td><td>Data Documentation Initiative, Codebook version 2.1 </td><td>METADATA</td><td>text/xml </td><td>xml </td></tr>\n",
"\t<tr><td>http://purl.org/ornl/schema/mercury/terms/v1.0 </td><td>Oak Ridge National Lab Mercury Metadata version 1.0 </td><td>METADATA</td><td>text/xml </td><td>xml </td></tr>\n",
"\t<tr><td>http://datacite.org/schema/kernel-3.0 </td><td>DataCite Metadata Schema version 3.0 </td><td>METADATA</td><td>text/xml </td><td>xml </td></tr>\n",
"\t<tr><td>http://datacite.org/schema/kernel-3.1 </td><td>DataCite Metadata Schema version 3.1 </td><td>METADATA</td><td>text/xml </td><td>xml </td></tr>\n",
"\t<tr><td>http://www.nexml.org/2009 </td><td>NeXML 2009 </td><td>DATA </td><td>text/xml </td><td>xml </td></tr>\n",
"\t<tr><td>http://ns.dataone.org/metadata/schema/onedcx/v1.0 </td><td>DataONE Dublin Core Extended v1.0 </td><td>METADATA</td><td>text/xml </td><td>xml </td></tr>\n",
"\t<tr><td>http://docs.annotatorjs.org/en/v1.2.x/annotation-format.html</td><td>AnnotatorJS 1.2.x Annotation model </td><td>RESOURCE</td><td>application/json </td><td>json</td></tr>\n",
"\t<tr><td>http://www.isotc211.org/2005/gmd </td><td>Geographic MetaData (GMD) Extensible Markup Language </td><td>METADATA</td><td>text/xml </td><td>xml </td></tr>\n",
"\t<tr><td>http://www.isotc211.org/2005/gmd-noaa </td><td>NOAA Variant Geographic MetaData (GMD) Extensible Markup Language </td><td>METADATA</td><td>text/xml </td><td>xml </td></tr>\n",
"\t<tr><td>http://www.isotc211.org/2005/gmd-pangaea </td><td>PANGAEA Variant Geographic MetaData (GMD) Extensible Markup Language </td><td>METADATA</td><td>text/xml </td><td>xml </td></tr>\n",
"\t<tr><td>application/bagit-097 </td><td>BagIt File Packaging Format Version 0.97 </td><td>DATA </td><td>NA </td><td>NA </td></tr>\n",
"\t<tr><td>text/tsv </td><td>Tab Separated Values Text </td><td>DATA </td><td>text/tab-separated-values </td><td>tsv </td></tr>\n",
"\t<tr><td>application/R </td><td>R programming language script </td><td>DATA </td><td>text/x-rsrc </td><td>R </td></tr>\n",
"\t<tr><td>application/MATLAB </td><td>MATLAB programming language script </td><td>DATA </td><td>text/x-matlab </td><td>m </td></tr>\n",
"\t<tr><td>application/SAS </td><td>SAS programming language script </td><td>DATA </td><td>text/x-sas </td><td>sas </td></tr>\n",
"\t<tr><td>application/vnd.google-earth.kmz </td><td>Google Earth Keyhole Markup Language (KML) Compressed archive </td><td>DATA </td><td>application/vnd.google-earth.kmz</td><td>kmz </td></tr>\n",
"\t<tr><td>application/MATLAB-v7.3 </td><td>Mathworks MATLAB version 7.3 (R2006b or later) binary file - HDF5 compatible</td><td>DATA </td><td>application/octet-stream </td><td>mat </td></tr>\n",
"\t<tr><td>application/MATLAB-v7 </td><td>Mathworks MATLAB version 7 (R14 or later) binary file </td><td>DATA </td><td>application/octet-stream </td><td>mat </td></tr>\n",
"\t<tr><td>application/MATLAB-v6 </td><td>Mathworks MATLAB version 6 (R8 or later) binary file </td><td>DATA </td><td>application/octet-stream </td><td>mat </td></tr>\n",
"\t<tr><td>application/MATLAB-v4 </td><td>Mathworks MATLAB version 4 binary file </td><td>DATA </td><td>application/octet-stream </td><td>mat </td></tr>\n",
"\t<tr><td>application/json </td><td>JavaScript Object Notation (JSON) file </td><td>DATA </td><td>application/json </td><td>json</td></tr>\n",
"\t<tr><td>application/json-ld </td><td>JavaScript Object Notation (JSON) Linked Data file </td><td>DATA </td><td>application/ld+json </td><td>json</td></tr>\n",
"\t<tr><td>text/markdown </td><td>Markdown file (pandoc markdown compatible) </td><td>DATA </td><td>text/markdown </td><td>md </td></tr>\n",
"\t<tr><td>text/x-rmarkdown </td><td>R Markdown file (pandoc markdown compatible) </td><td>DATA </td><td>text/markdown </td><td>Rmd </td></tr>\n",
"\t<tr><td>image/x-raw </td><td>RAW digital sensor image file </td><td>DATA </td><td>application/octet-stream </td><td>raw </td></tr>\n",
"\t<tr><td>http://www.openarchives.org/OAI/2.0/oai_dc/ </td><td>OAI-PMH Dublin Core v2.0, with online related resource </td><td>METADATA</td><td>text/xml </td><td>xml </td></tr>\n",
"\t<tr><td>application/x-hdf </td><td>Hierarchical Data Format version 4 (HDF4) </td><td>DATA </td><td>application/x-hdf </td><td>h4 </td></tr>\n",
"\t<tr><td>application/x-hdf5 </td><td>Hierarchical Data Format version 5 (HDF5) </td><td>DATA </td><td>application/x-hdf5 </td><td>h5 </td></tr>\n",
"\t<tr><td>https://purl.dataone.org/collections-1.0.0 </td><td>Dataset collections v1.0.0 </td><td>METADATA</td><td>text/xml </td><td>xml </td></tr>\n",
"\t<tr><td>https://purl.dataone.org/portals-1.0.0 </td><td>Dataset portals v1.0.0 </td><td>METADATA</td><td>text/xml </td><td>xml </td></tr>\n",
"</tbody>\n",
"</table>\n"
],
"text/latex": [
"A data.frame: 134 × 5\n",
"\\begin{tabular}{lllll}\n",
" ID & Name & Type & MediaType & Extension\\\\\n",
" <chr> & <chr> & <chr> & <chr> & <chr>\\\\\n",
"\\hline\n",
"\t eml://ecoinformatics.org/eml-2.0.0 & Ecological Metadata Language, version 2.0.0 & METADATA & text/xml & xml \\\\\n",
"\t eml://ecoinformatics.org/eml-2.0.1 & Ecological Metadata Language, version 2.0.1 & METADATA & text/xml & xml \\\\\n",
"\t eml://ecoinformatics.org/eml-2.1.0 & Ecological Metadata Language, version 2.1.0 & METADATA & text/xml & xml \\\\\n",
"\t eml://ecoinformatics.org/eml-2.1.1 & Ecological Metadata Language, version 2.1.1 & METADATA & text/xml & xml \\\\\n",
"\t https://eml.ecoinformatics.org/eml-2.2.0 & Ecological Metadata Language, version 2.2.0 & METADATA & text/xml & xml \\\\\n",
"\t http://www.esri.com/metadata/esriprof80.dtd & ESRI Profile of the Content Standard for Digital Geospatial Metadata, March 2003 & METADATA & text/xml & xml \\\\\n",
"\t FGDC-STD-001.1-1999 & Content Standard for Digital Geospatial Metadata, Biological Data Profile, version 001.1-1999 & METADATA & text/xml & xml \\\\\n",
"\t FGDC-STD-001.2-1999 & Content Standard for Digital Geospatial Metadata, Metadata Profile for Shoreline Data, version 001.2-1999 & METADATA & text/xml & xml \\\\\n",
"\t FGDC-STD-001-1998 & Content Standard for Digital Geospatial Metadata, version 001-1998 & METADATA & text/xml & xml \\\\\n",
"\t INCITS-453-2009 & North American Profile of ISO 19115: 2003 Geographic Information - Metadata & METADATA & text/xml & xml \\\\\n",
"\t http://www.unidata.ucar.edu/namespaces/netcdf/ncml-2.2 & NetCDF Markup Language, version 2.2 & METADATA & application/netcdf & nc \\\\\n",
"\t CF-1.0 & NetCDF Climate and Forecast Metadata Convention, version 1.0 & DATA & application/netcdf & nc \\\\\n",
"\t CF-1.1 & NetCDF Climate and Forecast Metadata Convention, version 1.1 & DATA & application/netcdf & nc \\\\\n",
"\t CF-1.2 & NetCDF Climate and Forecast Metadata Convention, version 1.2 & DATA & application/netcdf & nc \\\\\n",
"\t CF-1.3 & NetCDF Climate and Forecast Metadata Convention, version 1.3 & DATA & application/netcdf & nc \\\\\n",
"\t CF-1.4 & NetCDF Climate and Forecast Metadata Convention, version 1.4 & DATA & application/netcdf & nc \\\\\n",
"\t http://www.cuahsi.org/waterML/1.0/ & Water Markup Language, version 1.0 & METADATA & text/xml & xml \\\\\n",
"\t http://www.cuahsi.org/waterML/1.1/ & Water Markup Language, version 1.0 & METADATA & text/xml & xml \\\\\n",
"\t http://www.loc.gov/METS/ & Metadata Encoding and Transmission Standard, version 1 & METADATA & text/xml & xml \\\\\n",
"\t netCDF-3 & Network Common Data Format, version 3 & DATA & application/netcdf & nc \\\\\n",
"\t netCDF-4 & Network Common Data Format, version 4 & DATA & application/netcdf & nc \\\\\n",
"\t text/plain & Plain Text & DATA & text/plain & txt \\\\\n",
"\t text/csv & Comma Separated Values Text & DATA & text/csv & csv \\\\\n",
"\t image/bmp & Bitmap Image File & DATA & image/bmp & bmp \\\\\n",
"\t image/gif & Graphics Interchange Format & DATA & image/gif & gif \\\\\n",
"\t image/jp2 & JPEG 2000 & DATA & image/jp2 & jpg \\\\\n",
"\t image/jpeg & JPEG & DATA & image/jpeg & jpg \\\\\n",
"\t image/png & Portable Network Graphics & DATA & image/png & png \\\\\n",
"\t image/svg+xml & Scalable Vector Graphics & DATA & image/svg+xml & svg \\\\\n",
"\t image/tiff & Tagged Image File Format & DATA & image/tiff & tiff\\\\\n",
"\t ⋮ & ⋮ & ⋮ & ⋮ & ⋮\\\\\n",
"\t http://www.icpsr.umich.edu/DDI & Data Documentation Initiative, Codebook version 2.1 & METADATA & text/xml & xml \\\\\n",
"\t http://purl.org/ornl/schema/mercury/terms/v1.0 & Oak Ridge National Lab Mercury Metadata version 1.0 & METADATA & text/xml & xml \\\\\n",
"\t http://datacite.org/schema/kernel-3.0 & DataCite Metadata Schema version 3.0 & METADATA & text/xml & xml \\\\\n",
"\t http://datacite.org/schema/kernel-3.1 & DataCite Metadata Schema version 3.1 & METADATA & text/xml & xml \\\\\n",
"\t http://www.nexml.org/2009 & NeXML 2009 & DATA & text/xml & xml \\\\\n",
"\t http://ns.dataone.org/metadata/schema/onedcx/v1.0 & DataONE Dublin Core Extended v1.0 & METADATA & text/xml & xml \\\\\n",
"\t http://docs.annotatorjs.org/en/v1.2.x/annotation-format.html & AnnotatorJS 1.2.x Annotation model & RESOURCE & application/json & json\\\\\n",
"\t http://www.isotc211.org/2005/gmd & Geographic MetaData (GMD) Extensible Markup Language & METADATA & text/xml & xml \\\\\n",
"\t http://www.isotc211.org/2005/gmd-noaa & NOAA Variant Geographic MetaData (GMD) Extensible Markup Language & METADATA & text/xml & xml \\\\\n",
"\t http://www.isotc211.org/2005/gmd-pangaea & PANGAEA Variant Geographic MetaData (GMD) Extensible Markup Language & METADATA & text/xml & xml \\\\\n",
"\t application/bagit-097 & BagIt File Packaging Format Version 0.97 & DATA & NA & NA \\\\\n",
"\t text/tsv & Tab Separated Values Text & DATA & text/tab-separated-values & tsv \\\\\n",
"\t application/R & R programming language script & DATA & text/x-rsrc & R \\\\\n",
"\t application/MATLAB & MATLAB programming language script & DATA & text/x-matlab & m \\\\\n",
"\t application/SAS & SAS programming language script & DATA & text/x-sas & sas \\\\\n",
"\t application/vnd.google-earth.kmz & Google Earth Keyhole Markup Language (KML) Compressed archive & DATA & application/vnd.google-earth.kmz & kmz \\\\\n",
"\t application/MATLAB-v7.3 & Mathworks MATLAB version 7.3 (R2006b or later) binary file - HDF5 compatible & DATA & application/octet-stream & mat \\\\\n",
"\t application/MATLAB-v7 & Mathworks MATLAB version 7 (R14 or later) binary file & DATA & application/octet-stream & mat \\\\\n",
"\t application/MATLAB-v6 & Mathworks MATLAB version 6 (R8 or later) binary file & DATA & application/octet-stream & mat \\\\\n",
"\t application/MATLAB-v4 & Mathworks MATLAB version 4 binary file & DATA & application/octet-stream & mat \\\\\n",
"\t application/json & JavaScript Object Notation (JSON) file & DATA & application/json & json\\\\\n",
"\t application/json-ld & JavaScript Object Notation (JSON) Linked Data file & DATA & application/ld+json & json\\\\\n",
"\t text/markdown & Markdown file (pandoc markdown compatible) & DATA & text/markdown & md \\\\\n",
"\t text/x-rmarkdown & R Markdown file (pandoc markdown compatible) & DATA & text/markdown & Rmd \\\\\n",
"\t image/x-raw & RAW digital sensor image file & DATA & application/octet-stream & raw \\\\\n",
"\t http://www.openarchives.org/OAI/2.0/oai\\_dc/ & OAI-PMH Dublin Core v2.0, with online related resource & METADATA & text/xml & xml \\\\\n",
"\t application/x-hdf & Hierarchical Data Format version 4 (HDF4) & DATA & application/x-hdf & h4 \\\\\n",
"\t application/x-hdf5 & Hierarchical Data Format version 5 (HDF5) & DATA & application/x-hdf5 & h5 \\\\\n",
"\t https://purl.dataone.org/collections-1.0.0 & Dataset collections v1.0.0 & METADATA & text/xml & xml \\\\\n",
"\t https://purl.dataone.org/portals-1.0.0 & Dataset portals v1.0.0 & METADATA & text/xml & xml \\\\\n",
"\\end{tabular}\n"
],
"text/markdown": [
"\n",
"A data.frame: 134 × 5\n",
"\n",
"| ID <chr> | Name <chr> | Type <chr> | MediaType <chr> | Extension <chr> |\n",
"|---|---|---|---|---|\n",
"| eml://ecoinformatics.org/eml-2.0.0 | Ecological Metadata Language, version 2.0.0 | METADATA | text/xml | xml |\n",
"| eml://ecoinformatics.org/eml-2.0.1 | Ecological Metadata Language, version 2.0.1 | METADATA | text/xml | xml |\n",
"| eml://ecoinformatics.org/eml-2.1.0 | Ecological Metadata Language, version 2.1.0 | METADATA | text/xml | xml |\n",
"| eml://ecoinformatics.org/eml-2.1.1 | Ecological Metadata Language, version 2.1.1 | METADATA | text/xml | xml |\n",
"| https://eml.ecoinformatics.org/eml-2.2.0 | Ecological Metadata Language, version 2.2.0 | METADATA | text/xml | xml |\n",
"| http://www.esri.com/metadata/esriprof80.dtd | ESRI Profile of the Content Standard for Digital Geospatial Metadata, March 2003 | METADATA | text/xml | xml |\n",
"| FGDC-STD-001.1-1999 | Content Standard for Digital Geospatial Metadata, Biological Data Profile, version 001.1-1999 | METADATA | text/xml | xml |\n",
"| FGDC-STD-001.2-1999 | Content Standard for Digital Geospatial Metadata, Metadata Profile for Shoreline Data, version 001.2-1999 | METADATA | text/xml | xml |\n",
"| FGDC-STD-001-1998 | Content Standard for Digital Geospatial Metadata, version 001-1998 | METADATA | text/xml | xml |\n",
"| INCITS-453-2009 | North American Profile of ISO 19115: 2003 Geographic Information - Metadata | METADATA | text/xml | xml |\n",
"| http://www.unidata.ucar.edu/namespaces/netcdf/ncml-2.2 | NetCDF Markup Language, version 2.2 | METADATA | application/netcdf | nc |\n",
"| CF-1.0 | NetCDF Climate and Forecast Metadata Convention, version 1.0 | DATA | application/netcdf | nc |\n",
"| CF-1.1 | NetCDF Climate and Forecast Metadata Convention, version 1.1 | DATA | application/netcdf | nc |\n",
"| CF-1.2 | NetCDF Climate and Forecast Metadata Convention, version 1.2 | DATA | application/netcdf | nc |\n",
"| CF-1.3 | NetCDF Climate and Forecast Metadata Convention, version 1.3 | DATA | application/netcdf | nc |\n",
"| CF-1.4 | NetCDF Climate and Forecast Metadata Convention, version 1.4 | DATA | application/netcdf | nc |\n",
"| http://www.cuahsi.org/waterML/1.0/ | Water Markup Language, version 1.0 | METADATA | text/xml | xml |\n",
"| http://www.cuahsi.org/waterML/1.1/ | Water Markup Language, version 1.0 | METADATA | text/xml | xml |\n",
"| http://www.loc.gov/METS/ | Metadata Encoding and Transmission Standard, version 1 | METADATA | text/xml | xml |\n",
"| netCDF-3 | Network Common Data Format, version 3 | DATA | application/netcdf | nc |\n",
"| netCDF-4 | Network Common Data Format, version 4 | DATA | application/netcdf | nc |\n",
"| text/plain | Plain Text | DATA | text/plain | txt |\n",
"| text/csv | Comma Separated Values Text | DATA | text/csv | csv |\n",
"| image/bmp | Bitmap Image File | DATA | image/bmp | bmp |\n",
"| image/gif | Graphics Interchange Format | DATA | image/gif | gif |\n",
"| image/jp2 | JPEG 2000 | DATA | image/jp2 | jpg |\n",
"| image/jpeg | JPEG | DATA | image/jpeg | jpg |\n",
"| image/png | Portable Network Graphics | DATA | image/png | png |\n",
"| image/svg+xml | Scalable Vector Graphics | DATA | image/svg+xml | svg |\n",
"| image/tiff | Tagged Image File Format | DATA | image/tiff | tiff |\n",
"| ⋮ | ⋮ | ⋮ | ⋮ | ⋮ |\n",
"| http://www.icpsr.umich.edu/DDI | Data Documentation Initiative, Codebook version 2.1 | METADATA | text/xml | xml |\n",
"| http://purl.org/ornl/schema/mercury/terms/v1.0 | Oak Ridge National Lab Mercury Metadata version 1.0 | METADATA | text/xml | xml |\n",
"| http://datacite.org/schema/kernel-3.0 | DataCite Metadata Schema version 3.0 | METADATA | text/xml | xml |\n",
"| http://datacite.org/schema/kernel-3.1 | DataCite Metadata Schema version 3.1 | METADATA | text/xml | xml |\n",
"| http://www.nexml.org/2009 | NeXML 2009 | DATA | text/xml | xml |\n",
"| http://ns.dataone.org/metadata/schema/onedcx/v1.0 | DataONE Dublin Core Extended v1.0 | METADATA | text/xml | xml |\n",
"| http://docs.annotatorjs.org/en/v1.2.x/annotation-format.html | AnnotatorJS 1.2.x Annotation model | RESOURCE | application/json | json |\n",
"| http://www.isotc211.org/2005/gmd | Geographic MetaData (GMD) Extensible Markup Language | METADATA | text/xml | xml |\n",
"| http://www.isotc211.org/2005/gmd-noaa | NOAA Variant Geographic MetaData (GMD) Extensible Markup Language | METADATA | text/xml | xml |\n",
"| http://www.isotc211.org/2005/gmd-pangaea | PANGAEA Variant Geographic MetaData (GMD) Extensible Markup Language | METADATA | text/xml | xml |\n",
"| application/bagit-097 | BagIt File Packaging Format Version 0.97 | DATA | NA | NA |\n",
"| text/tsv | Tab Separated Values Text | DATA | text/tab-separated-values | tsv |\n",
"| application/R | R programming language script | DATA | text/x-rsrc | R |\n",
"| application/MATLAB | MATLAB programming language script | DATA | text/x-matlab | m |\n",
"| application/SAS | SAS programming language script | DATA | text/x-sas | sas |\n",
"| application/vnd.google-earth.kmz | Google Earth Keyhole Markup Language (KML) Compressed archive | DATA | application/vnd.google-earth.kmz | kmz |\n",
"| application/MATLAB-v7.3 | Mathworks MATLAB version 7.3 (R2006b or later) binary file - HDF5 compatible | DATA | application/octet-stream | mat |\n",
"| application/MATLAB-v7 | Mathworks MATLAB version 7 (R14 or later) binary file | DATA | application/octet-stream | mat |\n",
"| application/MATLAB-v6 | Mathworks MATLAB version 6 (R8 or later) binary file | DATA | application/octet-stream | mat |\n",
"| application/MATLAB-v4 | Mathworks MATLAB version 4 binary file | DATA | application/octet-stream | mat |\n",
"| application/json | JavaScript Object Notation (JSON) file | DATA | application/json | json |\n",
"| application/json-ld | JavaScript Object Notation (JSON) Linked Data file | DATA | application/ld+json | json |\n",
"| text/markdown | Markdown file (pandoc markdown compatible) | DATA | text/markdown | md |\n",
"| text/x-rmarkdown | R Markdown file (pandoc markdown compatible) | DATA | text/markdown | Rmd |\n",
"| image/x-raw | RAW digital sensor image file | DATA | application/octet-stream | raw |\n",
"| http://www.openarchives.org/OAI/2.0/oai_dc/ | OAI-PMH Dublin Core v2.0, with online related resource | METADATA | text/xml | xml |\n",
"| application/x-hdf | Hierarchical Data Format version 4 (HDF4) | DATA | application/x-hdf | h4 |\n",
"| application/x-hdf5 | Hierarchical Data Format version 5 (HDF5) | DATA | application/x-hdf5 | h5 |\n",
"| https://purl.dataone.org/collections-1.0.0 | Dataset collections v1.0.0 | METADATA | text/xml | xml |\n",
"| https://purl.dataone.org/portals-1.0.0 | Dataset portals v1.0.0 | METADATA | text/xml | xml |\n",
"\n"
],
"text/plain": [
" ID \n",
"1 eml://ecoinformatics.org/eml-2.0.0 \n",
"2 eml://ecoinformatics.org/eml-2.0.1 \n",
"3 eml://ecoinformatics.org/eml-2.1.0 \n",
"4 eml://ecoinformatics.org/eml-2.1.1 \n",
"5 https://eml.ecoinformatics.org/eml-2.2.0 \n",
"6 http://www.esri.com/metadata/esriprof80.dtd \n",
"7 FGDC-STD-001.1-1999 \n",
"8 FGDC-STD-001.2-1999 \n",
"9 FGDC-STD-001-1998 \n",
"10 INCITS-453-2009 \n",
"11 http://www.unidata.ucar.edu/namespaces/netcdf/ncml-2.2 \n",
"12 CF-1.0 \n",
"13 CF-1.1 \n",
"14 CF-1.2 \n",
"15 CF-1.3 \n",
"16 CF-1.4 \n",
"17 http://www.cuahsi.org/waterML/1.0/ \n",
"18 http://www.cuahsi.org/waterML/1.1/ \n",
"19 http://www.loc.gov/METS/ \n",
"20 netCDF-3 \n",
"21 netCDF-4 \n",
"22 text/plain \n",
"23 text/csv \n",
"24 image/bmp \n",
"25 image/gif \n",
"26 image/jp2 \n",
"27 image/jpeg \n",
"28 image/png \n",
"29 image/svg+xml \n",
"30 image/tiff \n",
"⋮ ⋮ \n",
"105 http://www.icpsr.umich.edu/DDI \n",
"106 http://purl.org/ornl/schema/mercury/terms/v1.0 \n",
"107 http://datacite.org/schema/kernel-3.0 \n",
"108 http://datacite.org/schema/kernel-3.1 \n",
"109 http://www.nexml.org/2009 \n",
"110 http://ns.dataone.org/metadata/schema/onedcx/v1.0 \n",
"111 http://docs.annotatorjs.org/en/v1.2.x/annotation-format.html\n",
"112 http://www.isotc211.org/2005/gmd \n",
"113 http://www.isotc211.org/2005/gmd-noaa \n",
"114 http://www.isotc211.org/2005/gmd-pangaea \n",
"115 application/bagit-097 \n",
"116 text/tsv \n",
"117 application/R \n",
"118 application/MATLAB \n",
"119 application/SAS \n",
"120 application/vnd.google-earth.kmz \n",
"121 application/MATLAB-v7.3 \n",
"122 application/MATLAB-v7 \n",
"123 application/MATLAB-v6 \n",
"124 application/MATLAB-v4 \n",
"125 application/json \n",
"126 application/json-ld \n",
"127 text/markdown \n",
"128 text/x-rmarkdown \n",
"129 image/x-raw \n",
"130 http://www.openarchives.org/OAI/2.0/oai_dc/ \n",
"131 application/x-hdf \n",
"132 application/x-hdf5 \n",
"133 https://purl.dataone.org/collections-1.0.0 \n",
"134 https://purl.dataone.org/portals-1.0.0 \n",
" Name \n",
"1 Ecological Metadata Language, version 2.0.0 \n",
"2 Ecological Metadata Language, version 2.0.1 \n",
"3 Ecological Metadata Language, version 2.1.0 \n",
"4 Ecological Metadata Language, version 2.1.1 \n",
"5 Ecological Metadata Language, version 2.2.0 \n",
"6 ESRI Profile of the Content Standard for Digital Geospatial Metadata, March 2003 \n",
"7 Content Standard for Digital Geospatial Metadata, Biological Data Profile, version 001.1-1999 \n",
"8 Content Standard for Digital Geospatial Metadata, Metadata Profile for Shoreline Data, version 001.2-1999\n",
"9 Content Standard for Digital Geospatial Metadata, version 001-1998 \n",
"10 North American Profile of ISO 19115: 2003 Geographic Information - Metadata \n",
"11 NetCDF Markup Language, version 2.2 \n",
"12 NetCDF Climate and Forecast Metadata Convention, version 1.0 \n",
"13 NetCDF Climate and Forecast Metadata Convention, version 1.1 \n",
"14 NetCDF Climate and Forecast Metadata Convention, version 1.2 \n",
"15 NetCDF Climate and Forecast Metadata Convention, version 1.3 \n",
"16 NetCDF Climate and Forecast Metadata Convention, version 1.4 \n",
"17 Water Markup Language, version 1.0 \n",
"18 Water Markup Language, version 1.0 \n",
"19 Metadata Encoding and Transmission Standard, version 1 \n",
"20 Network Common Data Format, version 3 \n",
"21 Network Common Data Format, version 4 \n",
"22 Plain Text \n",
"23 Comma Separated Values Text \n",
"24 Bitmap Image File \n",
"25 Graphics Interchange Format \n",
"26 JPEG 2000 \n",
"27 JPEG \n",
"28 Portable Network Graphics \n",
"29 Scalable Vector Graphics \n",
"30 Tagged Image File Format \n",
"⋮ ⋮ \n",
"105 Data Documentation Initiative, Codebook version 2.1 \n",
"106 Oak Ridge National Lab Mercury Metadata version 1.0 \n",
"107 DataCite Metadata Schema version 3.0 \n",
"108 DataCite Metadata Schema version 3.1 \n",
"109 NeXML 2009 \n",
"110 DataONE Dublin Core Extended v1.0 \n",
"111 AnnotatorJS 1.2.x Annotation model \n",
"112 Geographic MetaData (GMD) Extensible Markup Language \n",
"113 NOAA Variant Geographic MetaData (GMD) Extensible Markup Language \n",
"114 PANGAEA Variant Geographic MetaData (GMD) Extensible Markup Language \n",
"115 BagIt File Packaging Format Version 0.97 \n",
"116 Tab Separated Values Text \n",
"117 R programming language script \n",
"118 MATLAB programming language script \n",
"119 SAS programming language script \n",
"120 Google Earth Keyhole Markup Language (KML) Compressed archive \n",
"121 Mathworks MATLAB version 7.3 (R2006b or later) binary file - HDF5 compatible \n",
"122 Mathworks MATLAB version 7 (R14 or later) binary file \n",
"123 Mathworks MATLAB version 6 (R8 or later) binary file \n",
"124 Mathworks MATLAB version 4 binary file \n",
"125 JavaScript Object Notation (JSON) file \n",
"126 JavaScript Object Notation (JSON) Linked Data file \n",
"127 Markdown file (pandoc markdown compatible) \n",
"128 R Markdown file (pandoc markdown compatible) \n",
"129 RAW digital sensor image file \n",
"130 OAI-PMH Dublin Core v2.0, with online related resource \n",
"131 Hierarchical Data Format version 4 (HDF4) \n",
"132 Hierarchical Data Format version 5 (HDF5) \n",
"133 Dataset collections v1.0.0 \n",
"134 Dataset portals v1.0.0 \n",
" Type MediaType Extension\n",
"1 METADATA text/xml xml \n",
"2 METADATA text/xml xml \n",
"3 METADATA text/xml xml \n",
"4 METADATA text/xml xml \n",
"5 METADATA text/xml xml \n",
"6 METADATA text/xml xml \n",
"7 METADATA text/xml xml \n",
"8 METADATA text/xml xml \n",
"9 METADATA text/xml xml \n",
"10 METADATA text/xml xml \n",
"11 METADATA application/netcdf nc \n",
"12 DATA application/netcdf nc \n",
"13 DATA application/netcdf nc \n",
"14 DATA application/netcdf nc \n",
"15 DATA application/netcdf nc \n",
"16 DATA application/netcdf nc \n",
"17 METADATA text/xml xml \n",
"18 METADATA text/xml xml \n",
"19 METADATA text/xml xml \n",
"20 DATA application/netcdf nc \n",
"21 DATA application/netcdf nc \n",
"22 DATA text/plain txt \n",
"23 DATA text/csv csv \n",
"24 DATA image/bmp bmp \n",
"25 DATA image/gif gif \n",
"26 DATA image/jp2 jpg \n",
"27 DATA image/jpeg jpg \n",
"28 DATA image/png png \n",
"29 DATA image/svg+xml svg \n",
"30 DATA image/tiff tiff \n",
"⋮ ⋮ ⋮ ⋮ \n",
"105 METADATA text/xml xml \n",
"106 METADATA text/xml xml \n",
"107 METADATA text/xml xml \n",
"108 METADATA text/xml xml \n",
"109 DATA text/xml xml \n",
"110 METADATA text/xml xml \n",
"111 RESOURCE application/json json \n",
"112 METADATA text/xml xml \n",
"113 METADATA text/xml xml \n",
"114 METADATA text/xml xml \n",
"115 DATA NA NA \n",
"116 DATA text/tab-separated-values tsv \n",
"117 DATA text/x-rsrc R \n",
"118 DATA text/x-matlab m \n",
"119 DATA text/x-sas sas \n",
"120 DATA application/vnd.google-earth.kmz kmz \n",
"121 DATA application/octet-stream mat \n",
"122 DATA application/octet-stream mat \n",
"123 DATA application/octet-stream mat \n",
"124 DATA application/octet-stream mat \n",
"125 DATA application/json json \n",
"126 DATA application/ld+json json \n",
"127 DATA text/markdown md \n",
"128 DATA text/markdown Rmd \n",
"129 DATA application/octet-stream raw \n",
"130 METADATA text/xml xml \n",
"131 DATA application/x-hdf h4 \n",
"132 DATA application/x-hdf5 h5 \n",
"133 METADATA text/xml xml \n",
"134 METADATA text/xml xml "
]
},
"metadata": {},
"output_type": "display_data"
}
],
"source": [
"listFormats(cn)"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": []
}
],
"metadata": {
"kernelspec": {
"display_name": "R",
"language": "R",
"name": "ir"
},
"language_info": {
"codemirror_mode": "r",
"file_extension": ".r",
"mimetype": "text/x-r-source",
"name": "R",
"pygments_lexer": "r",
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