Cohort Ontology
type: Ontology
version IRI: coho.owl
description: None
license: unspecified
version info: 2026-05-19

editor preferred term
type: AnnotationProperty
editor preferred term: editor preferred term
has curation status: ready for release
definition: The concise, meaningful, and human-friendly name for a class or property preferred by the ontology developers. (US-English)
term editor: PERSON:Daniel Schober
definition source: GROUP:OBI:<http://purl.obolibrary.org/obo/obi>

example of usage
type: AnnotationProperty
editor preferred term: example of usage
has curation status: ready for release
definition: A phrase describing how a term should be used and/or a citation to a work which uses it. May also include other kinds of examples that facilitate immediate understanding, such as widely know prototypes or instances of a class, or cases where a relation is said to hold.
term editor: PERSON:Daniel Schober
definition source: GROUP:OBI:<http://purl.obolibrary.org/obo/obi>

in branch
type: AnnotationProperty
editor preferred term: in branch
definition: An annotation property indicating which module the terms belong to. This is currently experimental and not implemented yet.
term editor: GROUP:OBI
definition source: OBI_0000277

has curation status
type: AnnotationProperty
editor preferred term: has curation status
term editor: PERSON:Alan Ruttenberg
term editor: PERSON:Bill Bug
term editor: PERSON:Melanie Courtot

definition
type: AnnotationProperty
editor preferred term: definition
has curation status: ready for release
definition: The official definition, explaining the meaning of a class or property. Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions.
editor note: 2012-04-05: Barry Smith The official OBI definition, explaining the meaning of a class or property: 'Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions' is terrible. Can you fix to something like: A statement of necessary and sufficient conditions explaining the meaning of an expression referring to a class or property. Alan Ruttenberg Your proposed definition is a reasonable candidate, except that it is very common that necessary and sufficient conditions are not given. Mostly they are necessary, occasionally they are necessary and sufficient or just sufficient. Often they use terms that are not themselves defined and so they effectively can't be evaluated by those criteria. On the specifics of the proposed definition: We don't have definitions of 'meaning' or 'expression' or 'property'. For 'reference' in the intended sense I think we use the term 'denotation'. For 'expression', I think we you mean symbol, or identifier. For 'meaning' it differs for class and property. For class we want documentation that let's the intended reader determine whether an entity is instance of the class, or not. For property we want documentation that let's the intended reader determine, given a pair of potential relata, whether the assertion that the relation holds is true. The 'intended reader' part suggests that we also specify who, we expect, would be able to understand the definition, and also generalizes over human and computer reader to include textual and logical definition. Personally, I am more comfortable weakening definition to documentation, with instructions as to what is desirable. We also have the outstanding issue of how to aim different definitions to different audiences. A clinical audience reading chebi wants a different sort of definition documentation/definition from a chemistry trained audience, and similarly there is a need for a definition that is adequate for an ontologist to work with.
term editor: PERSON:Daniel Schober
definition source: GROUP:OBI:<http://purl.obolibrary.org/obo/obi>

editor note
type: AnnotationProperty
editor preferred term: editor note
has curation status: ready for release
definition: An administrative note intended for its editor. It may not be included in the publication version of the ontology, so it should contain nothing necessary for end users to understand the ontology.
term editor: PERSON:Daniel Schober
definition source: GROUP:OBI:<http://purl.obofoundry.org/obo/obi>

term editor
type: AnnotationProperty
editor preferred term: term editor
has curation status: ready for release
definition: Name of editor entering the term in the file. The term editor is a point of contact for information regarding the term. The term editor may be, but is not always, the author of the definition, which may have been worked upon by several people
editor note: 20110707, MC: label update to term editor and definition modified accordingly. See https://github.com/information-artifact-ontology/IAO/issues/115.
term editor: PERSON:Daniel Schober
definition source: GROUP:OBI:<http://purl.obolibrary.org/obo/obi>

alternative label
type: AnnotationProperty
editor preferred term: alternative label
has curation status: pending final vetting
definition: A label for a class or property that can be used to refer to the class or property instead of the preferred rdfs:label. Alternative labels should be used to indicate community- or context-specific labels, abbreviations, shorthand forms and the like.
term editor: OBO Operations committee
term editor: PERSON:Daniel Schober
definition source: GROUP:OBI:<http://purl.obolibrary.org/obo/obi>
comment: Consider re-defing to: An alternative name for a class or property which can mean the same thing as the preferred name (semantically equivalent, narrow, broad or related).

definition source
type: AnnotationProperty
editor preferred term: definition source
has curation status: ready for release
definition: Formal citation, e.g. identifier in external database to indicate / attribute source(s) for the definition. Free text indicate / attribute source(s) for the definition. EXAMPLE: Author Name, URI, MeSH Term C04, PUBMED ID, Wiki uri on 31.01.2007
term editor: PERSON:Daniel Schober
definition source: Discussion on obo-discuss mailing-list, see http://bit.ly/hgm99w
definition source: GROUP:OBI:<http://purl.obolibrary.org/obo/obi>

has obsolescence reason
type: AnnotationProperty
editor preferred term: has obsolescence reason
definition: Relates an annotation property to an obsolescence reason. The values of obsolescence reasons come from a list of predefined terms, instances of the class obsolescence reason specification.
term editor: PERSON:Alan Ruttenberg
term editor: PERSON:Melanie Courtot

curator note
type: AnnotationProperty
editor preferred term: curator note
has curation status: ready for release
definition: An administrative note of use for a curator but of no use for a user
term editor: PERSON:Alan Ruttenberg

term tracker item
type: AnnotationProperty
editor preferred term: term tracker item
example of usage: the URL for an ontology term tracker issue, such as https://github.com/monarch-initiative/mondo/issues/7588
has curation status: pending final vetting
definition: A URL for a request or discussion of an ontology term.
term editor: Person: Jie Zheng, Chris Stoeckert, Alan Ruttenberg
definition source: Person: Jie Zheng, Chris Stoeckert, Alan Ruttenberg
comment: The 'tracker item' can associate a tracker with a specific ontology term.
range: anyURI

ontology term requester
type: AnnotationProperty
editor preferred term: ontology term requester
has curation status: pending final vetting
definition: The name of the person, project, or organization that motivated inclusion of an ontology term by requesting its addition.
term editor: Person: Jie Zheng, Chris Stoeckert, Alan Ruttenberg
definition source: Person: Jie Zheng, Chris Stoeckert, Alan Ruttenberg
comment: The 'term requester' can credit the person, organization or project who request the ontology term.

is denotator type
type: AnnotationProperty
editor preferred term: is denotator type
definition: Relates an class defined in an ontology, to the type of it's denotator
editor note: In OWL 2 add AnnotationPropertyRange('is denotator type' 'denotator type')
term editor: Alan Ruttenberg

imported from
type: AnnotationProperty
editor preferred term: imported from
has curation status: pending final vetting
definition: For external terms/classes, the ontology from which the term was imported
term editor: PERSON:Alan Ruttenberg
term editor: PERSON:Melanie Courtot
definition source: GROUP:OBI:<http://purl.obolibrary.org/obo/obi>

expand expression to
type: AnnotationProperty
editor preferred term: expand expression to
example of usage: ObjectProperty: RO_0002104 Label: has plasma membrane part Annotations: IAO_0000424 "http://purl.obolibrary.org/obo/BFO_0000051 some (http://purl.org/obo/owl/GO#GO_0005886 and http://purl.obolibrary.org/obo/BFO_0000051 some ?Y)"
definition: A macro expansion tag applied to an object property (or possibly a data property) which can be used by a macro-expansion engine to generate more complex expressions from simpler ones
term editor: Chris Mungall

expand assertion to
type: AnnotationProperty
editor preferred term: expand assertion to
example of usage: ObjectProperty: RO??? Label: spatially disjoint from Annotations: expand_assertion_to "DisjointClasses: (http://purl.obolibrary.org/obo/BFO_0000051 some ?X) (http://purl.obolibrary.org/obo/BFO_0000051 some ?Y)"
definition: A macro expansion tag applied to an annotation property which can be expanded into a more detailed axiom.
term editor: Chris Mungall

first order logic expression
type: AnnotationProperty
editor preferred term: first order logic expression
term editor: PERSON:Alan Ruttenberg

antisymmetric property
type: AnnotationProperty
editor preferred term: antisymmetric property
example of usage: part_of antisymmetric property xsd:true
definition: Use boolean value xsd:true to indicate that the property is an antisymmetric property
term editor: Alan Ruttenberg
sub property of: logical characteristic of object property

OBO foundry unique label
type: AnnotationProperty
editor preferred term: OBO foundry unique label
has curation status: pending final vetting
definition: An alternative name for a class or property which is unique across the OBO Foundry.
editor note: The intended usage of that property is as follow: OBO foundry unique labels are automatically generated based on regular expressions provided by each ontology, so that SO could specify unique label = 'sequence ' + [label], etc. , MA could specify 'mouse + [label]' etc. Upon importing terms, ontology developers can choose to use the 'OBO foundry unique label' for an imported term or not. The same applies to tools .
term editor: PERSON:Alan Ruttenberg
term editor: PERSON:Bjoern Peters
term editor: PERSON:Chris Mungall
term editor: PERSON:Melanie Courtot
definition source: GROUP:OBO Foundry <http://obofoundry.org/>

has ID digit count
type: AnnotationProperty
editor preferred term: has ID digit count
example of usage: Ontology: <http://purl.obolibrary.org/obo/ro/idrange/> Annotations: 'has ID prefix': "http://purl.obolibrary.org/obo/RO_" 'has ID digit count' : 7, rdfs:label "RO id policy" 'has ID policy for': "RO"
definition: Relates an ontology used to record id policy to the number of digits in the URI. The URI is: the 'has ID prefix" annotation property value concatenated with an integer in the id range (left padded with "0"s to make this many digits)
term editor: Person:Alan Ruttenberg

has ID range allocated to
type: AnnotationProperty
editor preferred term: has ID range allocated
example of usage: Datatype: idrange:1 Annotations: 'has ID range allocated to': "Chris Mungall" EquivalentTo: xsd:integer[> 2151 , <= 2300]
definition: Relates a datatype that encodes a range of integers to the name of the person or organization who can use those ids constructed in that range to define new terms
term editor: Person:Alan Ruttenberg

has ID policy for
type: AnnotationProperty
editor preferred term: has ID policy for
example of usage: Ontology: <http://purl.obolibrary.org/obo/ro/idrange/> Annotations: 'has ID prefix': "http://purl.obolibrary.org/obo/RO_" 'has ID digit count' : 7, rdfs:label "RO id policy" 'has ID policy for': "RO"
definition: Relating an ontology used to record id policy to the ontology namespace whose policy it manages
term editor: Person:Alan Ruttenberg

has ID prefix
type: AnnotationProperty
editor preferred term: has ID prefix
example of usage: Ontology: <http://purl.obolibrary.org/obo/ro/idrange/> Annotations: 'has ID prefix': "http://purl.obolibrary.org/obo/RO_" 'has ID digit count' : 7, rdfs:label "RO id policy" 'has ID policy for': "RO"
definition: Relates an ontology used to record id policy to a prefix concatenated with an integer in the id range (left padded with "0"s to make this many digits) to construct an ID for a term being created.
term editor: Person:Alan Ruttenberg

elucidation
type: AnnotationProperty
editor preferred term: elucidation
term editor: person:Alan Ruttenberg
definition source: Person:Barry Smith
elucidation: Primitive terms in a highest-level ontology such as BFO are terms which are so basic to our understanding of reality that there is no way of defining them in a non-circular fashion. For these, therefore, we can provide only elucidations, supplemented by examples and by axioms

has associated axiom(nl)
type: AnnotationProperty
editor preferred term: has associated axiom(nl)
term editor: Person:Alan Ruttenberg
definition source: Person:Alan Ruttenberg
elucidation: An axiom associated with a term expressed using natural language

has associated axiom(fol)
type: AnnotationProperty
editor preferred term: has associated axiom(fol)
term editor: Person:Alan Ruttenberg
definition source: Person:Alan Ruttenberg
elucidation: An axiom expressed in first order logic using CLIF syntax

is allocated id range
type: AnnotationProperty
editor preferred term: is allocated id range
definition: Relates an ontology IRI to an (inclusive) range of IRIs in an OBO name space. The range is give as, e.g. "IAO_0020000-IAO_0020999"
term editor: PERSON:Alan Ruttenberg
comment: Add as annotation triples in the granting ontology

has ontology root term
type: AnnotationProperty
editor preferred term: has ontology root term
definition: Ontology annotation property. Relates an ontology to a term that is a designated root term of the ontology. Display tools like OLS can use terms annotated with this property as the starting point for rendering the ontology class hierarchy. There can be more than one root.
term editor: Nicolas Matentzoglu

may be identical to
type: AnnotationProperty
editor preferred term: may be identical to
definition: A annotation relationship between two terms in an ontology that may refer to the same (natural) type but where more evidence is required before terms are merged.
term editor: David Osumi-Sutherland
term tracker item: #40
ontology term requester: VFB
comment: Edges asserting this should be annotated with to record evidence supporting the assertion and its provenance.

scheduled for obsoletion on or after
type: AnnotationProperty
editor preferred term: scheduled for obsoletion on or after
definition: Used when the class or object is scheduled for obsoletion/deprecation on or after a particular date.
term editor: Chris Mungall, Jie Zheng
term tracker item: https://github.com/geneontology/go-ontology/issues/15532
term tracker item: https://github.com/information-artifact-ontology/ontology-metadata/issues/32
ontology term requester: GO ontology
range: dateTime

has axiom label
type: AnnotationProperty
editor preferred term: has axiom id
term editor: Person:Alan Ruttenberg
definition source: Person:Alan Ruttenberg
elucidation: A URI that is intended to be unique label for an axiom used for tracking change to the ontology. For an axiom expressed in different languages, each expression is given the same URI

term replaced by
type: AnnotationProperty
editor preferred term: term replaced by
has curation status: pending final vetting
definition: Use on obsolete terms, relating the term to another term that can be used as a substitute
term editor: Person:Alan Ruttenberg
definition source: Person:Alan Ruttenberg
comment: Add as annotation triples in the granting ontology

logical characteristic of object property
type: AnnotationProperty
definition: This is an annotation used on an object property to indicate a logical characterstic beyond what is possible in OWL.
definition source: OBO Operations call
created by: http://orcid.org/0000-0001-5208-3432

defined by construct
type: AnnotationProperty
example of usage: 'part disjoint with' 'defined by construct' """ PREFIX owl: <http://www.w3.org/2002/07/owl#> PREFIX : <http://example.org/ CONSTRUCT { [ a owl:Restriction ; owl:onProperty :part_of ; owl:someValuesFrom ?a ; owl:disjointWith [ a owl:Restriction ; owl:onProperty :part_of ; owl:someValuesFrom ?b ] ] } WHERE { ?a :part_disjoint_with ?b . }
definition: Links an annotation property to a SPARQL CONSTRUCT query which is meant to provide semantics for a shortcut relation.
term tracker item: https://github.com/ontodev/robot/issues/963
contributor: https://orcid.org/0000-0002-7356-1779
contributor: https://orcid.org/0000-0002-8688-6599

preferred label for community
type: AnnotationProperty
example of usage: The property is intended to be used exclusively on synonym assertions, to express that the synonym in question is the preference of a specific community. For example, one community may prefer to say call a disease "A" and another one "B" (but they are the same thing).
definition: A provenance property that denotes a synonym to be the preferred one for a specific community.
term tracker item: https://github.com/information-artifact-ontology/ontology-metadata/issues/185
contributor: https://orcid.org/0000-0002-7356-1779
created: 2025-06-02

abbreviation
type: AnnotationProperty
example of usage: CHEBI:26523 (reactive oxygen species) has an exact synonym (ROS), which is of type OMO:0003000 (abbreviation)
definition: A synonym type for describing abbreviations or initialisms
term tracker item: https://github.com/information-artifact-ontology/ontology-metadata/issues/122
contributor: https://orcid.org/0000-0003-4423-4370
created: 2023-03-03
sub property of: SynonymTypeProperty

ambiguous synonym
type: AnnotationProperty
definition: A synonym type for describing ambiguous synonyms
term tracker item: https://github.com/information-artifact-ontology/ontology-metadata/issues/122
contributor: https://orcid.org/0000-0003-4423-4370
created: 2023-03-03
sub property of: SynonymTypeProperty

dubious synonym
type: AnnotationProperty
definition: A synonym type for describing dubious synonyms
term tracker item: https://github.com/information-artifact-ontology/ontology-metadata/issues/122
contributor: https://orcid.org/0000-0003-4423-4370
created: 2023-03-03
sub property of: SynonymTypeProperty

layperson synonym
type: AnnotationProperty
example of usage: EFO:0006346 (severe cutaneous adverse reaction) has an exact synonym (scar), which is of the type OMO:0003003 (layperson synonym)
definition: A synonym type for describing layperson or colloquial synonyms
term tracker item: https://github.com/information-artifact-ontology/ontology-metadata/issues/122
contributor: https://orcid.org/0000-0003-4423-4370
created: 2023-03-03
sub property of: SynonymTypeProperty

plural form
type: AnnotationProperty
example of usage: CHEBI:23367 (molecular entity) has an exact synonym (molecular entities), which is of the type OMO:0003004 (plural form)
definition: A synonym type for describing pluralization synonyms
term tracker item: https://github.com/information-artifact-ontology/ontology-metadata/issues/122
contributor: https://orcid.org/0000-0003-4423-4370
created: 2023-03-03
sub property of: SynonymTypeProperty

UK spelling synonym
type: AnnotationProperty
example of usage: CHEBI:16189 (sulfate) has an exact synonym (sulphate), which is of the type OMO:0003005 (UK spelling synonym)
definition: A synonym type for describing UK spelling variants
term tracker item: https://github.com/information-artifact-ontology/ontology-metadata/issues/122
contributor: https://orcid.org/0000-0003-4423-4370
created: 2023-03-03
sub property of: SynonymTypeProperty

misspelling
type: AnnotationProperty
definition: A synonym type for common misspellings
term tracker item: https://github.com/information-artifact-ontology/ontology-metadata/issues/132
contributor: https://orcid.org/0000-0003-4423-4370
created: 2023-03-03
sub property of: SynonymTypeProperty

misnomer
type: AnnotationProperty
definition: A synonym type for misnomers, i.e., a synonym that is not technically correct but is commonly used anyway
term tracker item: https://github.com/information-artifact-ontology/ontology-metadata/issues/133
contributor: https://orcid.org/0000-0003-4423-4370
created: 2023-03-03
sub property of: SynonymTypeProperty

previous name
type: AnnotationProperty
example of usage: MAPT, the gene that encodes the Tau protein, has a previous name DDPAC. Note: in this case, the name type is more specifically the gene symbol.
definition: A synonym type for names that have been used as primary labels in the past.
term tracker item: https://github.com/information-artifact-ontology/ontology-metadata/issues/139
contributor: https://orcid.org/0000-0003-4423-4370
created: 2023-07-25
sub property of: SynonymTypeProperty

legal name
type: AnnotationProperty
example of usage: The legal name for Harvard University (https://ror.org/03vek6s52) is President and Fellows of Harvard College
definition: A synonym type for the legal entity name
term tracker item: https://github.com/information-artifact-ontology/ontology-metadata/issues/141
contributor: https://orcid.org/0000-0003-4423-4370
created: 2023-07-27
sub property of: SynonymTypeProperty

International Nonproprietary Name
type: AnnotationProperty
example of usage: CHEBI:46195 has been assigned the english International Nonproproprietary Name (INN) "paracetamol". In some cases such as this one, the INN might be the same as the ontology's primary label
definition: The International Nonproprietary Name (INN) is a standardize name for a pharmaceutical drug or active ingredient issued by the World Health Organization (WHO) meant to address the issues with country- or language-specific brand names. These are issued in several languages, including English, Latin, French, Russian, Spanish, Arabic, and Chinese.
term tracker item: https://github.com/information-artifact-ontology/ontology-metadata/issues/149
contributor: https://orcid.org/0000-0003-4423-4370
created: 2023-09-30
has exact synonym: INN
sub property of: SynonymTypeProperty

latin term
type: AnnotationProperty
example of usage: nasopharynx (UBERON:0001728) has the latin name "pars nasalis pharyngis
definition: A synonym type for describing Latin term synonyms.
term tracker item: https://github.com/information-artifact-ontology/ontology-metadata/issues/146
contributor: https://orcid.org/0000-0002-1773-2692
created: 2023-10-12
sub property of: SynonymTypeProperty

acronym
type: AnnotationProperty
example of usage: NASA is an word acronym for the US National Aeronautics and Space Administration because the acronym is pronounced. FBI is an initialism (also known as alphabetism) for the US Federal Bureau of Investigation since the letters are pronounced one at a time. JPEG is an acronym for Joint Photographic Experts Group but does not count as a word acronym nor an initialism since it is mixed how it is pronounced.
definition: A synonym type for describing abbreviations that are a part of the full name's words, such as initialisms or alphabetisms.
term tracker item: https://github.com/information-artifact-ontology/ontology-metadata/issues/135
contributor: https://orcid.org/0000-0003-4423-4370
created: 2023-11-01
sub property of: SynonymTypeProperty

has ontology hierarchical property
type: AnnotationProperty
example of usage: The Developing Mouse Brain Atlas Ontology (DBMA) ontology uses part-of in its hierarchy, so this would correspond to the following turtle: `<https://purl.brain-bican.org/ontology/dmbao/dmbao.owl> a owl:Ontology; OMO:0003014 rdfs:subClassOf, BFO:0000050`.
definition: Relates an ontology to predicates/properties that should be used by user interfaces to render the hierarchical structure of the ontology. Typically, this is rdfs:subClassOf, but in ontologies that are partonomies, this might also include BFO:0000050 (part of). Tools like OLS can use predicates annotated with this property for rendering the ontology class hierarchy. There can be more than one hierarchical property. In the absence of any, it should be assumed that it is rdfs:subClassOf.
term tracker item: https://github.com/information-artifact-ontology/IAO/issues/292
contributor: https://orcid.org/0000-0003-4423-4370
created: 2025-09-17

has symbol
type: AnnotationProperty
example of usage: A serial number such as "12324X"; a stop sign; a written proper name such as "OBI
definition: An information content entity that is a mark(s) or character(s) used as a conventional representation of another entity.
term tracker item: https://github.com/information-artifact-ontology/ontology-metadata/issues/144
contributor: https://orcid.org/0000-0002-6523-4866
created: 2024-03-25

EGA_subset
type: AnnotationProperty
sub property of: subset property

GWAS_subset
type: AnnotationProperty
sub property of: subset property

MetaboLight_subset
type: AnnotationProperty
sub property of: subset property

PRIDE_subset
type: AnnotationProperty
sub property of: subset property

subset property
type: AnnotationProperty
label: subset_property

has broad synonym
type: AnnotationProperty
definition: An alternative label for a class or property which has a more general meaning than the preferred name/primary label.
term editor: http://orcid.org/0000-0001-5208-3432
term tracker item: https://github.com/information-artifact-ontology/ontology-metadata/issues/18
sub property of: alternative label

database_cross_reference
type: AnnotationProperty
example of usage: disease characteristic (MONDO:0021125) has cross-reference (http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NCIT:C41009"^^xsd:string
definition: An annotation property that links an ontology entity or a statement to a prefixed identifier or URI.
term tracker item: https://github.com/information-artifact-ontology/ontology-metadata/issues/123
contributor: https://orcid.org/0000-0002-7356-1779
created: 2024-03-18
label: has cross-reference
label: xRef

has exact synonym
type: AnnotationProperty
definition: An alternative label for a class or property which has the exact same meaning than the preferred name/primary label.
term editor: http://orcid.org/0000-0001-5208-3432
term tracker item: https://github.com/information-artifact-ontology/ontology-metadata/issues/20
sub property of: alternative label

has narrow synonym
type: AnnotationProperty
definition: An alternative label for a class or property which has a more specific meaning than the preferred name/primary label.
term editor: http://orcid.org/0000-0001-5208-3432
term tracker item: https://github.com/information-artifact-ontology/ontology-metadata/issues/19
sub property of: alternative label

has_related_synonym
type: AnnotationProperty
definition: An alternative label for a class or property that has been used synonymously with the primary term name, but the usage is not strictly correct.
term editor: http://orcid.org/0000-0001-5208-3432
term tracker item: https://github.com/information-artifact-ontology/ontology-metadata/issues/21
label: has related synonym
sub property of: alternative label

in subset
type: AnnotationProperty
label: in_subset

part of
type: ObjectProperty
sub property of: overlaps
inverse of: has part
type: TransitiveProperty
definition: a core relation that holds between a part and its whole
in subset: valid for go annotation extension
in subset: valid for go gp2term
in subset: valid for go ontology
in subset: valid for gocam

has part
type: ObjectProperty
sub property of: overlaps
type: TransitiveProperty
definition: a core relation that holds between a whole and its part
in subset: valid for go annotation extension
in subset: valid for go ontology
in subset: valid for gocam

preceded by
type: ObjectProperty
sub property of: ends after
inverse of: precedes
type: TransitiveProperty
domain: occurrent
range: occurrent
property chain axiom: part of
definition: x is preceded by y if and only if the time point at which y ends is before or equivalent to the time point at which x starts. Formally: x preceded by y iff ω(y) <= α(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.
in subset: ro-eco

precedes
type: ObjectProperty
sub property of: temporally related to
type: TransitiveProperty
domain: occurrent
range: occurrent
property chain axiom: part of
definition: x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.
in subset: ro-eco

characteristic of
type: ObjectProperty
sub property of: characteristic of part of
inverse of: has characteristic
type: FunctionalProperty
definition: a relation between a specifically dependent continuant (the characteristic) and any other entity (the bearer), in which the characteristic depends on the bearer for its existence.

has characteristic
type: ObjectProperty
type: InverseFunctionalProperty
range: specifically dependent continuant
definition: Inverse of characteristic_of

participates in
type: ObjectProperty
inverse of: has participant
domain: continuant
range: occurrent
definition: a relation between a continuant and a process, in which the continuant is somehow involved in the process

has participant
type: ObjectProperty
domain: occurrent
range: continuant
property chain axiom: has part
definition: a relation between a process and a continuant, in which the continuant is somehow involved in the process

function of
type: ObjectProperty
sub property of: characteristic of
inverse of: has function
domain: function
definition: a relation between a function and an independent continuant (the bearer), in which the function specifically depends on the bearer for its existence

quality of
type: ObjectProperty
sub property of: characteristic of
inverse of: has quality
definition: a relation between a quality and an independent continuant (the bearer), in which the quality specifically depends on the bearer for its existence

role of
type: ObjectProperty
sub property of: characteristic of
inverse of: has role
definition: a relation between a role and an independent continuant (the bearer), in which the role specifically depends on the bearer for its existence

has function
type: ObjectProperty
sub property of: has characteristic
domain: independent continuant
range: function
definition: a relation between an independent continuant (the bearer) and a function, in which the function specifically depends on the bearer for its existence

has quality
type: ObjectProperty
sub property of: has characteristic
range: quality
definition: a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence

has role
type: ObjectProperty
sub property of: has characteristic
domain: independent continuant
range: role
definition: a relation between an independent continuant (the bearer) and a role, in which the role specifically depends on the bearer for its existence

has disposition
type: ObjectProperty
sub property of: has characteristic
inverse of: disposition of
domain: independent continuant
range: disposition
definition: a relation between an independent continuant (the bearer) and a disposition, in which the disposition specifically depends on the bearer for its existence

disposition of
type: ObjectProperty
sub property of: characteristic of
definition: inverse of has disposition
in subset: RO_0002259

location of
type: ObjectProperty
inverse of: located in
type: TransitiveProperty
definition: a relation between two independent continuants, the location and the target, in which the target is entirely within the location

located in
type: ObjectProperty
type: TransitiveProperty
domain: Class
  intersection of: independent continuant
  intersection of: Class
    complement of: spatial region
range: Class
  intersection of: independent continuant
  intersection of: Class
    complement of: spatial region
property chain axiom: part of
definition: a relation between two independent continuants, the target and the location, in which the target is entirely within the location
in subset: valid for go gp2term

has regulatory component activity
type: ObjectProperty
sub property of: has component activity
sub property of: regulated by
definition: A 'has regulatory component activity' B if A and B are GO molecular functions (GO_0003674), A has_component B and A is regulated by B.

has negative regulatory component activity
type: ObjectProperty
sub property of: has regulatory component activity
sub property of: negatively regulated by
definition: A relationship that holds between a GO molecular function and a component of that molecular function that negatively regulates the activity of the whole. More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is negatively regulated by B.

has positive regulatory component activity
type: ObjectProperty
sub property of: has regulatory component activity
sub property of: positively regulated by
definition: A relationship that holds between a GO molecular function and a component of that molecular function that positively regulates the activity of the whole. More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is positively regulated by B.

has component activity
type: ObjectProperty
sub property of: has component process

has component process
type: ObjectProperty
sub property of: has component
domain: process
range: process
definition: w 'has process component' p if p and w are processes, w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type.

directly regulated by
type: ObjectProperty
sub property of: regulated by
inverse of: directly regulates

directly negatively regulated by
type: ObjectProperty
sub property of: directly regulated by
inverse of: directly negatively regulates
definition: Process(P2) is directly negatively regulated by process(P1) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding negatively regulates the kinase activity (P2) of protein B then P2 directly negatively regulated by P1.

Axiom
annotated source: directly negatively regulated by
annotated property: definition
annotated target: Process(P2) is directly negatively regulated by process(P1) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding negatively regulates the kinase activity (P2) of protein B then P2 directly negatively regulated by P1.
database_cross_reference: https://orcid.org/0000-0002-7073-9172

directly positively regulated by
type: ObjectProperty
sub property of: directly regulated by
inverse of: directly positively regulates
definition: Process(P2) is directly postively regulated by process(P1) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P2 is directly postively regulated by P1.

Axiom
annotated source: directly positively regulated by
annotated property: definition
annotated target: Process(P2) is directly postively regulated by process(P1) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P2 is directly postively regulated by P1.
database_cross_reference: https://orcid.org/0000-0002-7073-9172

has effector activity
type: ObjectProperty
sub property of: has component activity
type: FunctionalProperty
definition: A 'has effector activity' B if A and B are GO molecular functions (GO_0003674), A 'has component activity' B and B is the effector (output function) of B. Each compound function has only one effector activity.

Axiom
annotated source: has effector activity
annotated property: definition
annotated target: A 'has effector activity' B if A and B are GO molecular functions (GO_0003674), A 'has component activity' B and B is the effector (output function) of B. Each compound function has only one effector activity.
database_cross_reference: https://orcid.org/0000-0002-7073-9172

ends after
type: ObjectProperty
sub property of: temporally related to
type: TransitiveProperty
in subset: ro-eco

immediately preceded by
type: ObjectProperty
sub property of: preceded by
inverse of: immediately precedes

immediately precedes
type: ObjectProperty
sub property of: precedes
in subset: ro-eco

overlaps
type: ObjectProperty
sub property of: mereotopologically related to
type: SymmetricProperty
property chain axiom: part of
property chain axiom: has part
definition: x overlaps y if and only if there exists some z such that x has part z and z part of y
in subset: valid for go annotation extension
in subset: valid for gocam
in subset: ro-eco

has component
type: ObjectProperty
sub property of: has part
definition: w 'has component' p if w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type.
in subset: ro-eco

regulates
type: ObjectProperty
sub property of: causally upstream of
inverse of: regulated by
type: TransitiveProperty
domain: process
range: process
property chain axiom: has effector activity
property chain axiom: directly regulates
definition: p regulates q iff p is causally upstream of q, the execution of p is not constant and varies according to specific conditions, and p influences the rate or magnitude of execution of q due to an effect either on some enabler of q or some enabler of a part of q.
in subset: valid for go annotation extension
in subset: valid for go ontology
in subset: valid for gocam

negatively regulates
type: ObjectProperty
sub property of: regulates
sub property of: causally upstream of, negative effect
inverse of: negatively regulated by
definition: p negatively regulates q iff p regulates q, and p decreases the rate or magnitude of execution of q.
in subset: valid for go annotation extension
in subset: valid for go ontology
in subset: valid for gocam

positively regulates
type: ObjectProperty
sub property of: regulates
sub property of: causally upstream of, positive effect
inverse of: positively regulated by
type: TransitiveProperty
property chain axiom: negatively regulates
definition: p positively regulates q iff p regulates q, and p increases the rate or magnitude of execution of q.
in subset: valid for go annotation extension
in subset: valid for go ontology
in subset: valid for gocam

capable of
type: ObjectProperty
sub property of: capable of part of
domain: independent continuant
range: process
definition: A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process.
in subset: ro-eco

capable of part of
type: ObjectProperty
sub property of: functionally related to
sub property of: causal agent in process
definition: c stands in this relationship to p if and only if there exists some p' such that c is capable_of p', and p' is part_of p.

temporally related to
type: ObjectProperty
domain: occurrent
range: occurrent
in subset: ro-eco

has input
type: ObjectProperty
sub property of: has participant
inverse of: input of
domain: process
definition: p has input c iff: p is a process, c is a material entity, c is a participant in p, c is present at the start of p, and the state of c is modified during p.
in subset: valid for go annotation extension
in subset: valid for go ontology
in subset: valid for gocam
in subset: ro-eco

acts upstream of
type: ObjectProperty
sub property of: acts upstream of or within
property chain axiom: enables
property chain axiom: causally upstream of
definition: c acts upstream of p if and only if c enables some f that is involved in p' and p' occurs chronologically before p, is not part of p, and affects the execution of p. c is a material entity and f, p, p' are processes.
in subset: valid for go gp2term

acts upstream of or within
type: ObjectProperty
sub property of: causal agent in process
property chain axiom: enables
property chain axiom: causally upstream of or within
definition: c acts upstream of or within p if c is enables f, and f is causally upstream of or within p. c is a material entity and p is an process.
has_related_synonym: affects
in subset: valid for go gp2term

causally upstream of, positive effect
type: ObjectProperty
sub property of: causally upstream of
sub property of: causally upstream of or within, positive effect
definition: p is causally upstream of, positive effect q iff p is casually upstream of q, and the execution of p is required for the execution of q.
in subset: valid for go annotation extension
in subset: valid for gocam

causally upstream of, negative effect
type: ObjectProperty
sub property of: causally upstream of
sub property of: causally upstream of or within, negative effect
definition: p is causally upstream of, negative effect q iff p is casually upstream of q, and the execution of p decreases the execution of q.
in subset: valid for go annotation extension
in subset: valid for gocam

characteristic of part of
type: ObjectProperty
sub property of: depends on
property chain axiom: part of
definition: q characteristic of part of w if and only if there exists some p such that q inheres in p and p part of w.

mereotopologically related to
type: ObjectProperty
definition: A mereological relationship or a topological relationship

enables
type: ObjectProperty
sub property of: capable of
inverse of: enabled by
property chain axiom: has part
property chain axiom: has component activity
definition: c enables p iff c is capable of p and c acts to execute p.
in subset: valid for go gp2term

functionally related to
type: ObjectProperty
definition: A grouping relationship for any relationship directly involving a function, or that holds because of a function of one of the related entities.

part of structure that is capable of
type: ObjectProperty
sub property of: functionally related to
definition: this relation holds between c and p when c is part of some c', and c' is capable of p.

involved in
type: ObjectProperty
sub property of: participates in
sub property of: involved in or involved in regulation of
property chain axiom: enables
property chain axiom: part of
definition: c involved_in p if and only if c enables some process p', and p' is part of p

enabled by
type: ObjectProperty
sub property of: has participant
sub property of: functionally related to
definition: inverse of enables
in subset: valid for gocam

regulated by
type: ObjectProperty
sub property of: causally downstream of or within
type: TransitiveProperty
domain: process
range: process
definition: inverse of regulates
in subset: RO_0002259

negatively regulated by
type: ObjectProperty
sub property of: regulated by
definition: inverse of negatively regulates
in subset: RO_0002259

positively regulated by
type: ObjectProperty
sub property of: regulated by
definition: inverse of positively regulates
in subset: RO_0002259

input of
type: ObjectProperty
sub property of: participates in
sub property of: functionally related to
definition: inverse of has input
in subset: RO_0002259
in subset: ro-eco

spatially coextensive with
type: ObjectProperty
sub property of: overlaps
property chain axiom: located in
property chain axiom:
  inverse of: located in
definition: x spatially_coextensive_with y if and inly if x and y have the same location

causally downstream of
type: ObjectProperty
sub property of: preceded by
sub property of: causally downstream of or within
inverse of: causally upstream of
definition: inverse of upstream of

immediately causally downstream of
type: ObjectProperty
sub property of: immediately preceded by
sub property of: causally downstream of
inverse of: immediately causally upstream of

indirectly positively regulates
type: ObjectProperty
sub property of: positively regulates
sub property of: indirectly regulates
type: TransitiveProperty
property chain axiom: directly positively regulates
property chain axiom: indirectly negatively regulates
definition: p indirectly positively regulates q iff p is indirectly causally upstream of q and p positively regulates q.

indirectly negatively regulates
type: ObjectProperty
sub property of: negatively regulates
sub property of: indirectly regulates
type: TransitiveProperty
property chain axiom: directly negatively regulates
definition: p indirectly negatively regulates q iff p is indirectly causally upstream of q and p negatively regulates q.

causally related to
type: ObjectProperty
definition: relation that links two events, processes, states, or objects such that one event, process, state, or object (a cause) contributes to the production of another event, process, state, or object (an effect) where the cause is partly or wholly responsible for the effect, and the effect is partly or wholly dependent on the cause.

Axiom
annotated source: causally related to
annotated property: definition
annotated target: relation that links two events, processes, states, or objects such that one event, process, state, or object (a cause) contributes to the production of another event, process, state, or object (an effect) where the cause is partly or wholly responsible for the effect, and the effect is partly or wholly dependent on the cause.
database_cross_reference: https://en.wikipedia.org/wiki/Causality

causally upstream of
type: ObjectProperty
sub property of: precedes
sub property of: causally upstream of or within
type: TransitiveProperty
definition: p is causally upstream of q iff p is causally related to q, the end of p precedes the end of q, and p is not an occurrent part of q.
in subset: valid for go annotation extension
in subset: valid for gocam

immediately causally upstream of
type: ObjectProperty
sub property of: immediately precedes
sub property of: causally upstream of
definition: p is immediately causally upstream of q iff p is causally upstream of q, and the end of p is coincident with the beginning of q.

causally upstream of or within
type: ObjectProperty
sub property of: causal relation between processes
inverse of: causally downstream of or within
type: TransitiveProperty
property chain axiom: part of
definition: p is 'causally upstream or within' q iff p is causally related to q, and the end of p precedes, or is coincident with, the end of q.
has_related_synonym: affects

causally downstream of or within
type: ObjectProperty
sub property of: causal relation between processes
type: TransitiveProperty
definition: inverse of causally upstream of or within
in subset: RO_0002259

involved in regulation of
type: ObjectProperty
sub property of: acts upstream of
sub property of: involved in or involved in regulation of
property chain axiom: enables
property chain axiom: regulates
property chain axiom: involved in
definition: c involved in regulation of p if c is involved in some p' and p' regulates some p

involved in positive regulation of
type: ObjectProperty
sub property of: involved in regulation of
property chain axiom: enables
property chain axiom: positively regulates
property chain axiom: involved in
definition: c involved in regulation of p if c is involved in some p' and p' positively regulates some p

involved in negative regulation of
type: ObjectProperty
sub property of: involved in regulation of
property chain axiom: enables
property chain axiom: negatively regulates
property chain axiom: involved in
definition: c involved in regulation of p if c is involved in some p' and p' negatively regulates some p

involved in or involved in regulation of
type: ObjectProperty
sub property of: acts upstream of or within
sub property of: functionally related to
sub property of: causal agent in process
definition: c involved in or regulates p if and only if either (i) c is involved in p or (ii) c is involved in regulation of p

interacts with
type: ObjectProperty
type: SymmetricProperty
domain: material entity
range: material entity
definition: A relationship that holds between two entities in which the processes executed by the two entities are causally connected.
in subset: ro-eco

molecularly interacts with
type: ObjectProperty
sub property of: interacts with
type: SymmetricProperty
definition: An interaction relationship in which the two partners are molecular entities that directly physically interact with each other for example via a stable binding interaction or a brief interaction during which one modifies the other.

phosphorylates
type: ObjectProperty
sub property of: molecularly interacts with

directly regulates activity of
type: ObjectProperty
sub property of: molecularly interacts with
sub property of: regulates activity of
domain: material entity
range: material entity
property chain axiom: enables
property chain axiom: regulates
property chain axiom: enabled by
definition: The entity A, immediately upstream of the entity B, has an activity that regulates an activity performed by B. For example, A and B may be gene products and binding of B by A regulates the kinase activity of B. A and B can be physically interacting but not necessarily. Immediately upstream means there are no intermediate entity between A and B.

directly negatively regulates activity of
type: ObjectProperty
sub property of: directly regulates activity of
domain: material entity
range: material entity
property chain axiom: enables
property chain axiom: directly negatively regulates
property chain axiom: enabled by
definition: The entity A, immediately upstream of the entity B, has an activity that negatively regulates an activity performed by B. For example, A and B may be gene products and binding of B by A negatively regulates the kinase activity of B.

directly positively regulates activity of
type: ObjectProperty
sub property of: directly regulates activity of
domain: material entity
range: material entity
property chain axiom: enables
property chain axiom: directly positively regulates
property chain axiom: enabled by
definition: The entity A, immediately upstream of the entity B, has an activity that positively regulates an activity performed by B. For example, A and B may be gene products and binding of B by A positively regulates the kinase activity of B.

helper property (not for use in curation)
type: ObjectProperty

is kinase activity
type: ObjectProperty
sub property of: molecular interaction relation helper property

causal agent in process
type: ObjectProperty
sub property of: causal relation between material entity and a process
inverse of: process has causal agent
definition: A relationship between a material entity and a process where the material entity has some causal role that influences the process

causal relation between processes
type: ObjectProperty
sub property of: causally related to
domain: occurrent
range: occurrent
definition: p is causally related to q if and only if p or any part of p and q or any part of q are linked by a chain of events where each event pair is one where the execution of p influences the execution of q. p may be upstream, downstream, part of, or a container of q.

depends on
type: ObjectProperty

causal relation between entities
type: ObjectProperty
sub property of: causally related to
domain: continuant
range: continuant

causally influenced by
type: ObjectProperty
sub property of: causal relation between entities
inverse of: causally influences

interaction relation helper property
type: ObjectProperty
sub property of: helper property (not for use in curation)

molecular interaction relation helper property
type: ObjectProperty
sub property of: interaction relation helper property

causally influences
type: ObjectProperty
sub property of: causal relation between entities
domain: continuant
range: continuant
property chain axiom: enables
property chain axiom: causally upstream of
property chain axiom: has input
property chain axiom: enabled by
definition: The entity or characteristic A is causally upstream of the entity or characteristic B, A having an effect on B. An entity corresponds to any biological type of entity as long as a mass is measurable. A characteristic corresponds to a particular specificity of an entity (e.g., phenotype, shape, size).

directly regulates
type: ObjectProperty
sub property of: regulates
sub property of: immediately causally upstream of
definition: p directly regulates q iff p is immediately causally upstream of q and p regulates q.
in subset: valid for go annotation extension
in subset: valid for go ontology
in subset: valid for gocam

has part structure that is capable of
type: ObjectProperty
sub property of: functionally related to
sub property of: causal relation between material entity and a process
property chain axiom: has part
property chain axiom: capable of
definition: s 'has part structure that is capable of' p if and only if there exists some part x such that s 'has part' x and x 'capable of' p

causal relation between material entity and a process
type: ObjectProperty
sub property of: causally related to
domain: material entity
range: process
definition: A relationship that holds between a material entity and a process in which causality is involved, with either the material entity or some part of the material entity exerting some influence over the process, or the process influencing some aspect of the material entity.

capable of regulating
type: ObjectProperty
sub property of: causal agent in process
property chain axiom: capable of
property chain axiom: regulates
definition: Holds between c and p if and only if c is capable of some activity a, and a regulates p.

capable of negatively regulating
type: ObjectProperty
sub property of: capable of regulating
property chain axiom: capable of
property chain axiom: negatively regulates
definition: Holds between c and p if and only if c is capable of some activity a, and a negatively regulates p.

capable of positively regulating
type: ObjectProperty
sub property of: capable of regulating
property chain axiom: capable of
property chain axiom: positively regulates
definition: Holds between c and p if and only if c is capable of some activity a, and a positively regulates p.

process has causal agent
type: ObjectProperty
sub property of: causally related to
definition: Inverse of 'causal agent in process'

directly positively regulates
type: ObjectProperty
sub property of: positively regulates
sub property of: directly regulates
definition: p directly positively regulates q iff p is immediately causally upstream of q, and p positively regulates q.
in subset: valid for go annotation extension
in subset: valid for go ontology
in subset: valid for gocam

directly negatively regulates
type: ObjectProperty
sub property of: negatively regulates
sub property of: directly regulates
definition: p directly negatively regulates q iff p is immediately causally upstream of q, and p negatively regulates q.
in subset: valid for go annotation extension
in subset: valid for go ontology
in subset: valid for gocam

enables subfunction
type: ObjectProperty
sub property of: functionally related to
property chain axiom: enables
property chain axiom: has part
definition: Holds between an entity and an process P where the entity enables some larger compound process, and that larger process has-part P.

acts upstream of or within, positive effect
type: ObjectProperty
sub property of: acts upstream of or within
property chain axiom: enables
property chain axiom: causally upstream of or within, positive effect
in subset: valid for go gp2term

acts upstream of or within, negative effect
type: ObjectProperty
sub property of: acts upstream of or within
property chain axiom: enables
property chain axiom: causally upstream of or within, negative effect
in subset: valid for go gp2term

acts upstream of, positive effect
type: ObjectProperty
sub property of: acts upstream of
sub property of: acts upstream of or within, positive effect
property chain axiom: enables
property chain axiom: causally upstream of, positive effect
definition: c 'acts upstream of, positive effect' p if c is enables f, and f is causally upstream of p, and the direction of f is positive
in subset: valid for go gp2term

acts upstream of, negative effect
type: ObjectProperty
sub property of: acts upstream of
sub property of: acts upstream of or within, negative effect
property chain axiom: enables
property chain axiom: causally upstream of, negative effect
definition: c 'acts upstream of, negative effect' p if c is enables f, and f is causally upstream of p, and the direction of f is negative
in subset: valid for go gp2term

causally upstream of or within, negative effect
type: ObjectProperty
sub property of: causally upstream of or within

causally upstream of or within, positive effect
type: ObjectProperty
sub property of: causally upstream of or within

regulates activity of
type: ObjectProperty
sub property of: causally influences
domain: material entity
range: material entity
definition: The entity A has an activity that regulates an activity of the entity B. For example, A and B are gene products where the catalytic activity of A regulates the kinase activity of B.

indirectly causally upstream of
type: ObjectProperty
sub property of: causally upstream of
definition: p is indirectly causally upstream of q iff p is causally upstream of q and there exists some process r such that p is causally upstream of r and r is causally upstream of q.

indirectly regulates
type: ObjectProperty
sub property of: regulates
sub property of: indirectly causally upstream of
definition: p indirectly regulates q iff p is indirectly causally upstream of q and p regulates q.

device utilizes material
type: ObjectProperty
property chain axiom: capable of
property chain axiom: has input
definition: X device utilizes material Y means X and Y are material entities, and X is capable of some process P that has input Y.

regulates characteristic
type: ObjectProperty
sub property of: causally related to
domain: process
range: quality
property chain axiom: regulates
definition: A relationship that holds between a process and a characteristic in which process (P) regulates characteristic (C) iff: P results in the existence of C OR affects the intensity or magnitude of C.

positively regulates characteristic
type: ObjectProperty
sub property of: regulates characteristic
property chain axiom: positively regulates
definition: A relationship that holds between a process and a characteristic in which process (P) positively regulates characteristic (C) iff: P results in an increase in the intensity or magnitude of C.

negatively regulates characteristic
type: ObjectProperty
sub property of: regulates characteristic
property chain axiom: negatively regulates
property chain axiom: positively regulates characteristic
property chain axiom: positively regulates
definition: A relationship that holds between a process and a characteristic in which process (P) negatively regulates characteristic (C) iff: P results in a decrease in the intensity or magnitude of C.

hasCohort
type: ObjectProperty
domain: cohort aggregation
range: cohort

hasSubCohort
type: ObjectProperty
inverse of: isSubCohortOf
domain: cohort
range: cohort

has_data_collection_location
type: ObjectProperty
type: TransitiveProperty
range: Geographic Area
property chain axiom: located in

isSubCohortOf
type: ObjectProperty
domain: cohort
range: cohort

Africa
type: Class
subclass of: Geographic Area
database_cross_reference: GAZ:00000457

Asia
type: Class
subclass of: Geographic Area
database_cross_reference: GAZ:00000465

Australia
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Oceania
database_cross_reference: GAZ:00000463

Austria
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Europe
database_cross_reference: GAZ:00002942

Bangladesh
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: South Asia
database_cross_reference: GAZ:00003750

Belgium
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Europe
database_cross_reference: GAZ:00002938

Brazil
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: South America
database_cross_reference: GAZ:00002828

Burkina Faso
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Western Africa
database_cross_reference: GAZ:00000905

Canada
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Northern America
database_cross_reference: GAZ:00002560

Central Africa
type: Class
subclass of: independent continuant
subclass of: Geographic Area
subclass of: Restriction
  on property: located in
  some values from: Africa
database_cross_reference: GAZ:00000588

Central America
type: Class
subclass of: independent continuant
subclass of: Geographic Area
subclass of: Restriction
  on property: located in
  some values from: Northern America
database_cross_reference: GAZ:00002891

China
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Eastern Asia
database_cross_reference: GAZ:00002845

Costa Rica
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Central America
database_cross_reference: GAZ:00002901

Croatia
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Europe
database_cross_reference: GAZ:00002719

Denmark
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Europe
database_cross_reference: GAZ:00002635

Eastern Africa
type: Class
subclass of: independent continuant
subclass of: Geographic Area
subclass of: Restriction
  on property: located in
  some values from: Africa
database_cross_reference: GAZ:00000556

Eastern Asia
type: Class
subclass of: independent continuant
subclass of: Geographic Area
subclass of: Restriction
  on property: located in
  some values from: Asia
database_cross_reference: GAZ:00002471

Estonia
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Europe
database_cross_reference: GAZ:00002959

Ethiopia
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Eastern Africa
database_cross_reference: GAZ:00000567

Europe
type: Class
subclass of: Geographic Area
database_cross_reference: GAZ:00000464

Finland
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Europe
database_cross_reference: GAZ:00002937

France
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Europe
database_cross_reference: GAZ:00002940

Germany
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Europe
database_cross_reference: GAZ:00002646

Ghana
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Western Africa
database_cross_reference: GAZ:00000908

Greece
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Europe
database_cross_reference: GAZ:00002945

Iceland
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Europe
database_cross_reference: GAZ:00000843

India
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: South Asia
database_cross_reference: GAZ:00002839

Italy
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Europe
database_cross_reference: GAZ:00002650

Japan
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Eastern Asia
database_cross_reference: GAZ:00002747

Kenya
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Eastern Africa
database_cross_reference: GAZ:00001101

Latin America and the Caribbean
type: Class
subclass of: Geographic Area
database_cross_reference: GAZ:00000459

Melanesia
type: Class
subclass of: independent continuant
subclass of: Geographic Area
subclass of: Restriction
  on property: located in
  some values from: Oceania
database_cross_reference: GAZ:00005860

Mexico
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Northern America
database_cross_reference: GAZ:00002852

Micronesia
type: Class
subclass of: independent continuant
subclass of: Geographic Area
subclass of: Restriction
  on property: located in
  some values from: Oceania
database_cross_reference: GAZ:00005862

Netherlands
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Europe
database_cross_reference: GAZ:00001549

Northern Africa
type: Class
subclass of: independent continuant
subclass of: Geographic Area
subclass of: Restriction
  on property: located in
  some values from: Africa
database_cross_reference: GAZ:00000555

Northern America
type: Class
subclass of: Geographic Area
database_cross_reference: GAZ:00000458

Norway
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Europe
database_cross_reference: GAZ:00002699

Oceania
type: Class
subclass of: Geographic Area
database_cross_reference: GAZ:00000468

Pakistan
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: South Asia
database_cross_reference: GAZ:00005246

Peru
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: South America
database_cross_reference: GAZ:00002932

Poland
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Europe
database_cross_reference: GAZ:00002939

Polynesia
type: Class
subclass of: independent continuant
subclass of: Geographic Area
subclass of: Restriction
  on property: located in
  some values from: Oceania
database_cross_reference: GAZ:00005861

Singapore
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: South-Eastern Asia
database_cross_reference: GAZ:00003923

South-Eastern Asia
type: Class
subclass of: independent continuant
subclass of: Geographic Area
subclass of: Restriction
  on property: located in
  some values from: Asia
database_cross_reference: GAZ:00000559

South America
type: Class
subclass of: Geographic Area
database_cross_reference: GAZ:00000459

South Africa
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Southern Africa
database_cross_reference: GAZ:00000553

South Asia
type: Class
subclass of: independent continuant
subclass of: Geographic Area
subclass of: Restriction
  on property: located in
  some values from: Asia
database_cross_reference: GAZ:00002472

Southern Africa
type: Class
subclass of: independent continuant
subclass of: Geographic Area
subclass of: Restriction
  on property: located in
  some values from: Africa
database_cross_reference: GAZ:00000553

Spain
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Europe
database_cross_reference: GAZ:00000591

Sweden
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Europe
database_cross_reference: GAZ:00002729

Taiwan
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Eastern Asia
database_cross_reference: GAZ:00005341

United Kingdom
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Europe
database_cross_reference: GAZ:00002637

United States
type: Class
subclass of: independent continuant
subclass of: Country
subclass of: Restriction
  on property: located in
  some values from: Northern America
database_cross_reference: GAZ:00002459

Western Africa
type: Class
subclass of: independent continuant
subclass of: Geographic Area
subclass of: Restriction
  on property: located in
  some values from: Africa
database_cross_reference: GAZ:00000554

continuant
type: Class
subclass of: Restriction
  on property: part of
  all values from: continuant
disjoint with: occurrent
disjoint with: Restriction
  on property: part of
  some values from: occurrent
definition: An entity that exists in full at any time in which it exists at all, persists through time while maintaining its identity and has no temporal parts.

occurrent
type: Class
subclass of: Restriction
  on property: part of
  all values from: occurrent
disjoint with: Restriction
  on property: part of
  some values from: continuant
definition: An entity that has temporal parts and that happens, unfolds or develops through time.

independent continuant
type: Class
subclass of: continuant
subclass of: Restriction
  on property: part of
  all values from: independent continuant
disjoint with: specifically dependent continuant
definition: b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002])

spatial region
type: Class
subclass of: immaterial entity

process
type: Class
subclass of: occurrent
definition: p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003])

disposition
type: Class
subclass of: realizable entity
disjoint with: role

realizable entity
type: Class
subclass of: specifically dependent continuant
subclass of: Restriction
  on property: part of
  all values from: realizable entity
disjoint with: quality
definition: A specifically dependent continuant that inheres in continuant entities and are not exhibited in full at every time in which it inheres in an entity or group of entities. The exhibition or actualization of a realizable entity is a particular manifestation, functioning or process that occurs under certain circumstances.

quality
type: Class
subclass of: specifically dependent continuant
subclass of: Restriction
  on property: part of
  all values from: quality

specifically dependent continuant
type: Class
subclass of: continuant
subclass of: Restriction
  on property: part of
  all values from: specifically dependent continuant
definition: b is a specifically dependent continuant = Def. b is a continuant & there is some independent continuant c which is not a spatial region and which is such that b s-depends_on c at every time t during the course of b’s existence. (axiom label in BFO2 Reference: [050-003])

role
type: Class
subclass of: realizable entity
definition: A realizable entity the manifestation of which brings about some result or end that is not essential to a continuant in virtue of the kind of thing that it is but that can be served or participated in by that kind of continuant in some kinds of natural, social or institutional contexts.

function
type: Class
subclass of: disposition

material entity
type: Class
subclass of: independent continuant
disjoint with: immaterial entity
disjoint with: Restriction
  on property: part of
  some values from: immaterial entity
definition: An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time.

immaterial entity
type: Class
subclass of: independent continuant
disjoint with: Restriction
  on property: has part
  some values from: material entity

molecular_function
type: Class
subclass of: process
definition: A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs.
label: gene product or complex activity

Axiom
annotated source: molecular_function
annotated property: definition
annotated target: A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs.
database_cross_reference: GOC:pdt

biological_process
type: Class
subclass of: process
definition: A biological process is the execution of a genetically-encoded biological module or program. It consists of all the steps required to achieve the specific biological objective of the module. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence.
database_cross_reference: Wikipedia:Biological_process
has_related_synonym: single organism process
has_related_synonym: single-organism process
label: biological process

Axiom
annotated source: biological_process
annotated property: definition
annotated target: A biological process is the execution of a genetically-encoded biological module or program. It consists of all the steps required to achieve the specific biological objective of the module. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence.
database_cross_reference: GOC:pdt

kinase activity
type: Class
subclass of: molecular_function
subclass of: Restriction
  on property: is kinase activity
  has self: true
definition: Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
database_cross_reference: Reactome:R-HSA-6788855
database_cross_reference: Reactome:R-HSA-6788867

Axiom
annotated source: kinase activity
annotated property: definition
annotated target: Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
database_cross_reference: ISBN:0198506732

FN3KRP phosphorylates PsiAm, RibAm
type: Axiom
annotated source: kinase activity
annotated property: database_cross_reference
annotated target: Reactome:R-HSA-6788855

FN3K phosphorylates ketosamines
type: Axiom
annotated source: kinase activity
annotated property: database_cross_reference
annotated target: Reactome:R-HSA-6788867

data entity
type: Class
subclass of: information content entity
editor preferred term: data entity

information content entity
type: Class
editor preferred term: information content entity

curation status specification
type: Class
equivalent class: Class
  one of: example to be eventually removed
  one of: metadata complete
  one of: organizational term
  one of: ready for release
  one of: metadata incomplete
  one of: uncurated
  one of: pending final vetting
  one of: to be replaced with external ontology term
  one of: requires discussion
subclass of: data about an ontology part
editor preferred term: curation status specification
has curation status: pending final vetting
definition: The curation status of the term. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value.
editor note: Better to represent curation as a process with parts and then relate labels to that process (in IAO meeting)
term editor: PERSON:Bill Bug
definition source: GROUP:OBI:<http://purl.obolibrary.org/obo/obi>
definition source: OBI_0000266

data about an ontology part
type: Class
subclass of: data entity
editor preferred term: data about an ontology part
definition: Data about an ontology part is a data item about a part of an ontology, for example a term
term editor: Person:Alan Ruttenberg

obsolescence reason specification
type: Class
equivalent class: Class
  one of: failed exploratory term
  one of: placeholder removed
  one of: terms merged
  one of: term imported
  one of: term split
  one of: out of scope
subclass of: data about an ontology part
editor preferred term: obsolescence reason specification
has curation status: pending final vetting
definition: The reason for which a term has been deprecated. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value.
editor note: The creation of this class has been inspired in part by Werner Ceusters' paper, Applying evolutionary terminology auditing to the Gene Ontology.
term editor: PERSON: Alan Ruttenberg
term editor: PERSON: Melanie Courtot

denotator type
type: Class
equivalent class: Class
  one of: universal
  one of: defined class
  one of: named class expression
subclass of: data about an ontology part
editor preferred term: denotator type
example of usage: The Basic Formal Ontology ontology makes a distinction between Universals and defined classes, where the formal are "natural kinds" and the latter arbitrary collections of entities.
definition: A denotator type indicates how a term should be interpreted from an ontological perspective.
term editor: Alan Ruttenberg
definition source: Barry Smith, Werner Ceusters

ontology module
type: Class
subclass of: data about an ontology part
editor preferred term: ontology module
editor note: I have placed this under 'data about an ontology part', but this can be discussed. I think this is OK if 'part' is interpreted reflexively, as an ontology module is the whole ontology rather than part of it.
alternative label: ontology file
curator note: This class and it's subclasses are applied to OWL ontologies. Using an rdf:type triple will result in problems with OWL-DL. I propose that dcterms:type is instead used to connect an ontology URI with a class from this hierarchy. The class hierarchy is not disjoint, so multiple assertions can be made about a single ontology.

base ontology module
type: Class
subclass of: ontology module
editor preferred term: base ontology module
definition: An ontology module that comprises only of asserted axioms local to the ontology, excludes import directives, and excludes axioms or declarations from external ontologies.

editors ontology module
type: Class
subclass of: ontology module
editor preferred term: editors ontology module
definition: An ontology module that is intended to be directly edited, typically managed in source control, and typically not intended for direct consumption by end-users.
alternative label: source ontology module

main release ontology module
type: Class
subclass of: ontology module
editor preferred term: main release ontology module
definition: An ontology module that is intended to be the primary release product and the one consumed by the majority of tools.
editor note: TODO: Add logical axioms that state that a main release ontology module is derived from (directly or indirectly) an editors module

bridge ontology module
type: Class
subclass of: ontology module
editor preferred term: bridge ontology module
definition: An ontology module that consists entirely of axioms that connect or bridge two distinct ontology modules. For example, the Uberon-to-ZFA bridge module.

import ontology module
type: Class
subclass of: subset ontology module
editor preferred term: import ontology module
definition: A subset ontology module that is intended to be imported from another ontology.
editor note: TODO: add axioms that indicate this is the output of a module extraction process.
alternative label: import file

subset ontology module
type: Class
subclass of: ontology module
editor preferred term: subset ontology module
definition: An ontology module that is extracted from a main ontology module and includes only a subset of entities or axioms.
alternative label: ontology slim
alternative label: subset ontology

curation subset ontology module
type: Class
subclass of: subset ontology module
editor preferred term: curation subset ontology module
definition: A subset ontology that is intended as a whitelist for curators using the ontology. Such a subset will exclude classes that curators should not use for curation.

analysis subset ontology module
type: Class
subclass of: subset ontology module
editor preferred term: analysis ontology module
definition: An ontology module that is intended for usage in analysis or discovery applications.

single layer subset ontology module
type: Class
subclass of: subset ontology module
editor preferred term: single layer ontology module
definition: A subset ontology that is largely comprised of a single layer or strata in an ontology class hierarchy. The purpose is typically for rolling up for visualization. The classes in the layer need not be disjoint.
alternative label: ribbon subset

exclusion subset ontology module
type: Class
subclass of: subset ontology module
editor preferred term: exclusion subset ontology module
definition: A subset of an ontology that is intended to be excluded for some purpose. For example, a blacklist of classes.
alternative label: antislim

external import ontology module
type: Class
subclass of: import ontology module
editor preferred term: external import ontology module
definition: An imported ontology module that is derived from an external ontology. Derivation methods include the OWLAPI SLME approach.
alternative label: external import

species subset ontology module
type: Class
subclass of: subset ontology module
editor preferred term: species subset ontology module
definition: A subset ontology that is crafted to either include or exclude a taxonomic grouping of species.
alternative label: taxon subset

reasoned ontology module
type: Class
subclass of: ontology module
editor preferred term: reasoned ontology module
definition: An ontology module that contains axioms generated by a reasoner. The generated axioms are typically direct SubClassOf axioms, but other possibilities are available.

generated ontology module
type: Class
subclass of: ontology module
editor preferred term: generated ontology module
definition: An ontology module that is automatically generated, for example via a SPARQL query or via template and a CSV.
editor note: TODO: Add axioms (using PROV-O?) that indicate this is the output-of some reasoning process

template generated ontology module
type: Class
subclass of: generated ontology module
editor preferred term: template generated ontology module
definition: An ontology module that is automatically generated from a template specification and fillers for slots in that template.

taxonomic bridge ontology module
type: Class
subclass of: bridge ontology module
editor preferred term: taxonomic bridge ontology module

ontology module subsetted by expressivity
type: Class
subclass of: subset ontology module
editor preferred term: ontology module subsetted by expressivity

obo basic subset ontology module
type: Class
subclass of: ontology module subsetted by expressivity
editor preferred term: obo basic subset ontology module
definition: A subset ontology that is designed for basic applications to continue to make certain simplifying assumptions; many of these simplifying assumptions were based on the initial version of the Gene Ontology, and have become enshrined in many popular and useful tools such as term enrichment tools. Examples of such assumptions include: traversing the ontology graph ignoring relationship types using a naive algorithm will not lead to cycles (i.e. the ontology is a DAG); every referenced term is declared in the ontology (i.e. there are no dangling clauses). An ontology is OBO Basic if and only if it has the following characteristics: DAG Unidirectional No Dangling Clauses Fully Asserted Fully Labeled No equivalence axioms Singly labeled edges No qualifier lists No disjointness axioms No owl-axioms header No imports

ontology module subsetted by OWL profile
type: Class
subclass of: ontology module subsetted by expressivity
editor preferred term: ontology module subsetted by OWL profile

EL++ ontology module
type: Class
subclass of: ontology module subsetted by OWL profile
editor preferred term: EL++ ontology module

Geographic Area
type: Class
subclass of: Conceptual Entity
in subset: NCIT C132298
in subset: NCIT C132308
in subset: NCIT C61410

Conceptual Entity
type: Class

Country
type: Class
subclass of: Geographic Area
in subset: NCIT C132298
in subset: NCIT C132308
in subset: NCIT C183061
in subset: NCIT C188693
in subset: NCIT C201253
in subset: NCIT C207412
in subset: NCIT C54447
in subset: NCIT C61410

quality
type: Class
subclass of: specifically dependent continuant
definition: A dependent entity that inheres in a bearer by virtue of how the bearer is related to other entities

Axiom
annotated source: quality
annotated property: definition
annotated target: A dependent entity that inheres in a bearer by virtue of how the bearer is related to other entities
database_cross_reference: PATOC:GVG

cohort
type: Class
definition: A group of individuals grouped together based on a shared characteristic or property of interest.
database_cross_reference: EFO:0004445
database_cross_reference: NCIT:C61512

cohort aggregation
type: Class
subclass of: Restriction
  on property: hasCohort
  some values from: cohort
subclass of: Restriction
  on property: hasCohort
  min qualified cardinality: 2
  on class: cohort
definition: A study, project or consortium that compares multiple cohorts.

1000 Genomes
type: Class
subclass of: cohort
has_related_synonym: 1000G
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: 1000 Genomes
annotated property: has_related_synonym
annotated target: 1000G
has synonym type: abbreviation

AddNeuroMed Cohort
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Finland
subclass of: Restriction
  on property: has_data_collection_location
  some values from: France
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Greece
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Italy
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Poland
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: ANM
has_related_synonym: AddNeuroMed
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: AddNeuroMed Cohort
annotated property: has_related_synonym
annotated target: ANM
has synonym type: abbreviation

Axiom
annotated source: AddNeuroMed Cohort
annotated property: has_related_synonym
annotated target: AddNeuroMed
has synonym type: abbreviation

Adenoma Prevention with Celecoxib trail
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: APC
has_related_synonym: APC Trail
has_related_synonym: Adenoma Prevention with Celecoxib
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Adenoma Prevention with Celecoxib trail
annotated property: has_related_synonym
annotated target: APC
has synonym type: abbreviation

Axiom
annotated source: Adenoma Prevention with Celecoxib trail
annotated property: has_related_synonym
annotated target: APC Trail
has synonym type: abbreviation

Axiom
annotated source: Adenoma Prevention with Celecoxib trail
annotated property: has_related_synonym
annotated target: Adenoma Prevention with Celecoxib
has synonym type: abbreviation

Advanced Study of Aortic Pathology
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Netherlands
has_related_synonym: ASAP
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Advanced Study of Aortic Pathology
annotated property: has_related_synonym
annotated target: ASAP
has synonym type: abbreviation

Africa Wits-INDEPTH partnership for Genomics studies
type: Class
subclass of: cohort aggregation
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Burkina Faso
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Ethiopia
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Ghana
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Kenya
subclass of: Restriction
  on property: has_data_collection_location
  some values from: South Africa
has_related_synonym: AWI-Gen
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Africa Wits-INDEPTH partnership for Genomics studies
annotated property: has_related_synonym
annotated target: AWI-Gen
has synonym type: abbreviation

Arthritis Research UK Osteoarthritis Genetics
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: arcOGEN
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Arthritis Research UK Osteoarthritis Genetics
annotated property: has_related_synonym
annotated target: arcOGEN
has synonym type: abbreviation

Asian Cancer Project
type: Class
subclass of: cohort aggregation
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Japan
has_related_synonym: ACP
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Asian Cancer Project
annotated property: has_related_synonym
annotated target: ACP
has synonym type: abbreviation

Aspirin for Asymptomatic Atherosclerosis Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: AAA
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Aspirin for Asymptomatic Atherosclerosis Study
annotated property: has_related_synonym
annotated target: AAA
has synonym type: abbreviation

AtheroExpress
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Netherlands
has_related_synonym: AEGS1
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: AtheroExpress
annotated property: has_related_synonym
annotated target: AEGS1
has synonym type: abbreviation

Atherosclerosis Risk in Communities Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: ARIC
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Atherosclerosis Risk in Communities Study
annotated property: has_related_synonym
annotated target: ARIC
has synonym type: abbreviation

Atopic Dermatitis Research Network
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: ADRN
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Atopic Dermatitis Research Network
annotated property: has_related_synonym
annotated target: ADRN
has synonym type: abbreviation

Australia Cancer Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Australia
has_related_synonym: ACS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Australia Cancer Study
annotated property: has_related_synonym
annotated target: ACS
has synonym type: abbreviation

Australian Ovarian Cancer Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Australia
has_related_synonym: AOCS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Australian Ovarian Cancer Study
annotated property: has_related_synonym
annotated target: AOCS
has synonym type: abbreviation

Australian Twin Registry
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Australia
has_related_synonym: ATR
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Australian Twin Registry
annotated property: has_related_synonym
annotated target: ATR
has synonym type: abbreviation

Avon Longitudinal Study of Parents and Children
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: ALSPAC
has_related_synonym: AMC-PAS
in subset: EGA_subset
in subset: GWAS_subset
in subset: PRIDE_subset

Axiom
annotated source: Avon Longitudinal Study of Parents and Children
annotated property: has_related_synonym
annotated target: ALSPAC
has synonym type: abbreviation

Axiom
annotated source: Avon Longitudinal Study of Parents and Children
annotated property: has_related_synonym
annotated target: AMC-PAS
has synonym type: abbreviation

Berlin_Frankfurt_Munster trials
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Germany
has_related_synonym: BFM
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Berlin_Frankfurt_Munster trials
annotated property: has_related_synonym
annotated target: BFM
has synonym type: abbreviation

Bladder Cancer Prognosis Programme
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: BCPP
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Bladder Cancer Prognosis Programme
annotated property: has_related_synonym
annotated target: BCPP
has synonym type: abbreviation

Brazilian Cohort
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Brazil
has_related_synonym: Brazil
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Brazilian Cohort
annotated property: has_related_synonym
annotated target: Brazil
has synonym type: abbreviation

Breast Cancer Association Consortium
type: Class
subclass of: cohort aggregation
has_related_synonym: BCAC
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Breast Cancer Association Consortium
annotated property: has_related_synonym
annotated target: BCAC
has synonym type: abbreviation

Bruneck study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Italy
has_related_synonym: BRUNECK
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Bruneck study
annotated property: has_related_synonym
annotated target: BRUNECK
has synonym type: abbreviation

Cancer and Leukemia Group B
type: Class
subclass of: cohort aggregation
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: CALGB
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Cancer and Leukemia Group B
annotated property: has_related_synonym
annotated target: CALGB
has synonym type: abbreviation

Cancer Genome Atlas
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: TCGA
in subset: EGA_subset
in subset: GWAS_subset
in subset: MetaboLight_subset
in subset: PRIDE_subset

Axiom
annotated source: Cancer Genome Atlas
annotated property: has_related_synonym
annotated target: TCGA
has synonym type: abbreviation

Cancer Prevention Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: CPS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Cancer Prevention Study
annotated property: has_related_synonym
annotated target: CPS
has synonym type: abbreviation

Cancer Prostate in Sweden
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Sweden
has_related_synonym: CAPS
in subset: EGA_subset
in subset: GWAS_subset
in subset: MetaboLight_subset

Axiom
annotated source: Cancer Prostate in Sweden
annotated property: has_related_synonym
annotated target: CAPS
has synonym type: abbreviation

Candesartan in Heart failure Assessment of Reduction in Mortality and morbidit
type: Class
subclass of: temporary unclassified
has_related_synonym: CHARM
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Candesartan in Heart failure Assessment of Reduction in Mortality and morbidit
annotated property: has_related_synonym
annotated target: CHARM
has synonym type: abbreviation

Cardio-metabolic Genome Epidemiology Study
type: Class
subclass of: temporary unclassified
has_related_synonym: CAGE
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Cardio-metabolic Genome Epidemiology Study
annotated property: has_related_synonym
annotated target: CAGE
has synonym type: abbreviation

Cardiogenics Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: France
has_related_synonym: CARDIOGENICS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Cardiogenics Study
annotated property: has_related_synonym
annotated target: CARDIOGENICS
has synonym type: abbreviation

CARDIoGRAMplusC4D
type: Class
subclass of: cohort
in subset: EGA_subset
in subset: GWAS_subset

Carolina Head and Neck Cancer Epidemiology
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: CHANCE
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Carolina Head and Neck Cancer Epidemiology
annotated property: has_related_synonym
annotated target: CHANCE
has synonym type: abbreviation

CARTaGENE cohort (CHU Sainte-Justine, Quebec, Canada)
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Canada
has_related_synonym: CARTaGENE
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: CARTaGENE cohort (CHU Sainte-Justine, Quebec, Canada)
annotated property: has_related_synonym
annotated target: CARTaGENE
has synonym type: abbreviation

Center for Autism Research and Treatment
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: CART
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Center for Autism Research and Treatment
annotated property: has_related_synonym
annotated target: CART
has synonym type: abbreviation

Center on Antisocial Drug Dependence
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: CADD
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Center on Antisocial Drug Dependence
annotated property: has_related_synonym
annotated target: CADD
has synonym type: abbreviation

Centre dEtude du Polymorphisme Humain
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: France
has_related_synonym: CEPH
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Centre dEtude du Polymorphisme Humain
annotated property: has_related_synonym
annotated target: CEPH
has synonym type: abbreviation

Centre National de G_notypage
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: France
has_related_synonym: CNG
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Centre National de G_notypage
annotated property: has_related_synonym
annotated target: CNG
has synonym type: abbreviation

Chicago Asthma Genetics
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: CAG
in subset: EGA_subset
in subset: GWAS_subset
in subset: MetaboLight_subset
in subset: PRIDE_subset

Axiom
annotated source: Chicago Asthma Genetics
annotated property: has_related_synonym
annotated target: CAG
has synonym type: abbreviation

Children, Allergy, Milieu, Stockholm, Epidemiology
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Sweden
has_related_synonym: BAMSE
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Children, Allergy, Milieu, Stockholm, Epidemiology
annotated property: has_related_synonym
annotated target: BAMSE
has synonym type: abbreviation

Cholesterol and Atherosclerosis Pharmacogenetics
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: CAP
in subset: EGA_subset
in subset: GWAS_subset
in subset: MetaboLight_subset

Axiom
annotated source: Cholesterol and Atherosclerosis Pharmacogenetics
annotated property: has_related_synonym
annotated target: CAP
has synonym type: abbreviation

Cilento study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Italy
has_related_synonym: Cilento
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Cilento study
annotated property: has_related_synonym
annotated target: Cilento
has synonym type: abbreviation

COIN
type: Class
subclass of: temporary unclassified
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
in subset: EGA_subset
in subset: GWAS_subset

COIN-B
type: Class
subclass of: temporary unclassified
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
in subset: EGA_subset
in subset: GWAS_subset

Colorectal Cancer Study of Austria
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Austria
has_related_synonym: CORSA
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Colorectal Cancer Study of Austria
annotated property: has_related_synonym
annotated target: CORSA
has synonym type: abbreviation

Consortium for the Longitudinal Evaluation of African Americans with Early Rheumatoid Arthritis
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: CLEAR
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Consortium for the Longitudinal Evaluation of African Americans with Early Rheumatoid Arthritis
annotated property: has_related_synonym
annotated target: CLEAR
has synonym type: abbreviation

Consortium of Minority Population Genome-Wide Association Studies of Stroke
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: COMPASS
in subset: EGA_subset
in subset: GWAS_subset
in subset: PRIDE_subset

Axiom
annotated source: Consortium of Minority Population Genome-Wide Association Studies of Stroke
annotated property: has_related_synonym
annotated target: COMPASS
has synonym type: abbreviation

Cooperative Health Research in the Region of Augsburg
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Germany
has_related_synonym: KORA
in subset: EGA_subset
in subset: GWAS_subset
in subset: PRIDE_subset

Axiom
annotated source: Cooperative Health Research in the Region of Augsburg
annotated property: has_related_synonym
annotated target: KORA
has synonym type: abbreviation

Copenhagen Hospital Biobank
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Denmark
has_related_synonym: CHB
has_related_synonym: Copenhagen BB
in subset: EGA_subset
in subset: GWAS_subset
in subset: MetaboLight_subset

Axiom
annotated source: Copenhagen Hospital Biobank
annotated property: has_related_synonym
annotated target: CHB
has synonym type: abbreviation

Axiom
annotated source: Copenhagen Hospital Biobank
annotated property: has_related_synonym
annotated target: Copenhagen BB
has synonym type: abbreviation

CROATIA-Korcula Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Croatia
has_related_synonym: CROATIA-KORCULA
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: CROATIA-Korcula Study
annotated property: has_related_synonym
annotated target: CROATIA-KORCULA
has synonym type: abbreviation

Danish Glostrup Cohort
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Denmark
has_related_synonym: DGC
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Danish Glostrup Cohort
annotated property: has_related_synonym
annotated target: DGC
has synonym type: abbreviation

Diabetes Genetics in Pakistan
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Pakistan
has_related_synonym: DGP
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Diabetes Genetics in Pakistan
annotated property: has_related_synonym
annotated target: DGP
has synonym type: abbreviation

Diabetes in Mexico Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Mexico
has_related_synonym: DMS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Diabetes in Mexico Study
annotated property: has_related_synonym
annotated target: DMS
has synonym type: abbreviation

Diabetes Prevention Program
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: DPP
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Diabetes Prevention Program
annotated property: has_related_synonym
annotated target: DPP
has synonym type: abbreviation

Diabetes Reduction Assessment with Ramipril and Rosiglitazone Medication
type: Class
subclass of: cohort
has_related_synonym: DREAM
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Diabetes Reduction Assessment with Ramipril and Rosiglitazone Medication
annotated property: has_related_synonym
annotated target: DREAM
has synonym type: abbreviation

Diabetes Research on Patient Stratification
type: Class
subclass of: temporary unclassified
has_related_synonym: DIRECT
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Diabetes Research on Patient Stratification
annotated property: has_related_synonym
annotated target: DIRECT
has synonym type: abbreviation

Dortmund Health Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Germany
has_related_synonym: DHS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Dortmund Health Study
annotated property: has_related_synonym
annotated target: DHS
has synonym type: abbreviation

Duke Cognition Cohort
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: DCC
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Duke Cognition Cohort
annotated property: has_related_synonym
annotated target: DCC
has synonym type: abbreviation

DUNDEE
type: Class
subclass of: temporary unclassified
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
in subset: EGA_subset
in subset: GWAS_subset

Durban Diabetes Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: South Africa
has_related_synonym: DDS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Durban Diabetes Study
annotated property: has_related_synonym
annotated target: DDS
has synonym type: abbreviation

Dutch and Belgian Lung Cancer Screening Trial
type: Class
subclass of: temporary unclassified
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Belgium
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Netherlands
has_related_synonym: NELSON
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Dutch and Belgian Lung Cancer Screening Trial
annotated property: has_related_synonym
annotated target: NELSON
has synonym type: abbreviation

Dutch Microbiome Project
type: Class
subclass of: temporary unclassified
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Netherlands
has_related_synonym: DMP
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Dutch Microbiome Project
annotated property: has_related_synonym
annotated target: DMP
has synonym type: abbreviation

Edinburgh Stroke Study
type: Class
subclass of: temporary unclassified
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: ESS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Edinburgh Stroke Study
annotated property: has_related_synonym
annotated target: ESS
has synonym type: abbreviation

ENGAGE AF-TIMI 48
type: Class
subclass of: temporary unclassified
has_related_synonym: ENGAGE
has_related_synonym: ENGAGE_AF-TIMI_48
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: ENGAGE AF-TIMI 48
annotated property: has_related_synonym
annotated target: ENGAGE
has synonym type: abbreviation

Axiom
annotated source: ENGAGE AF-TIMI 48
annotated property: has_related_synonym
annotated target: ENGAGE_AF-TIMI_48
has synonym type: abbreviation

EPIGEN
type: Class
subclass of: temporary unclassified
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Brazil
in subset: EGA_subset
in subset: GWAS_subset

Erasmus Rucphen Family Study
type: Class
subclass of: temporary unclassified
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Netherlands
has_related_synonym: ERF
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Erasmus Rucphen Family Study
annotated property: has_related_synonym
annotated target: ERF
has synonym type: abbreviation

Estonian Biobank
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Estonia
has_related_synonym: EB
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Estonian Biobank
annotated property: has_related_synonym
annotated target: EB
has synonym type: abbreviation

European Prospective Investigation into Cancer
type: Class
subclass of: cohort
has_related_synonym: EPIC
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: European Prospective Investigation into Cancer
annotated property: has_related_synonym
annotated target: EPIC
has synonym type: abbreviation

European Prospective Investigation of Cancer-Norfolk
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: EPIC-Norfolk
in subset: EGA_subset
in subset: GWAS_subset
in subset: MetaboLight_subset

Axiom
annotated source: European Prospective Investigation of Cancer-Norfolk
annotated property: has_related_synonym
annotated target: EPIC-Norfolk
has synonym type: abbreviation

EuroTARGET project
type: Class
subclass of: cohort
has_related_synonym: EuroTARGET
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: EuroTARGET project
annotated property: has_related_synonym
annotated target: EuroTARGET
has synonym type: abbreviation

Extremely Low Gestational Age Newborns
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: ELGAN
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Extremely Low Gestational Age Newborns
annotated property: has_related_synonym
annotated target: ELGAN
has synonym type: abbreviation

Fatty Acid Sensor Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Denmark
has_related_synonym: FAS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Fatty Acid Sensor Study
annotated property: has_related_synonym
annotated target: FAS
has synonym type: abbreviation

Finnish Twin Cohort Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Finland
has_related_synonym: FTC
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Finnish Twin Cohort Study
annotated property: has_related_synonym
annotated target: FTC
has synonym type: abbreviation

FINRISK
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Finland
in subset: EGA_subset
in subset: GWAS_subset

Flemish Gut Flora Project
type: Class
subclass of: temporary unclassified
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Belgium
has_related_synonym: FGFP
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Flemish Gut Flora Project
annotated property: has_related_synonym
annotated target: FGFP
has synonym type: abbreviation

Gabriel Advanced Survey
type: Class
subclass of: cohort
has_related_synonym: GAS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Gabriel Advanced Survey
annotated property: has_related_synonym
annotated target: GAS
has synonym type: abbreviation

GCAT. Genomes For Life.
type: Class
subclass of: temporary unclassified
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Spain
has_related_synonym: GCAT
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: GCAT. Genomes For Life.
annotated property: has_related_synonym
annotated target: GCAT
has synonym type: abbreviation

GENESIS
type: Class
subclass of: temporary unclassified
subclass of: Restriction
  on property: has_data_collection_location
  some values from: France
in subset: EGA_subset
in subset: GWAS_subset
in subset: PRIDE_subset

Genetic Analysis of Multiple Sclerosis
type: Class
subclass of: temporary unclassified
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: GAMS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Genetic Analysis of Multiple Sclerosis
annotated property: has_related_synonym
annotated target: GAMS
has synonym type: abbreviation

Genetic Consortium for Anorexia Nervosa
type: Class
subclass of: cohort
has_related_synonym: GCAN
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Genetic Consortium for Anorexia Nervosa
annotated property: has_related_synonym
annotated target: GCAN
has synonym type: abbreviation

Genetic Epidemiology of Asthma in Costa Rica
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Costa Rica
has_related_synonym: CRA
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Genetic Epidemiology of Asthma in Costa Rica
annotated property: has_related_synonym
annotated target: CRA
has synonym type: abbreviation

Genetic Overlap between Metabolic and Psychiatric traits
type: Class
subclass of: cohort
has_related_synonym: GOMAP
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Genetic Overlap between Metabolic and Psychiatric traits
annotated property: has_related_synonym
annotated target: GOMAP
has synonym type: abbreviation

Genetic Prostate cancer risk stratification for targeted screening
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: PROFILE
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Genetic Prostate cancer risk stratification for targeted screening
annotated property: has_related_synonym
annotated target: PROFILE
has synonym type: abbreviation

Genetic Research in Isolated
type: Class
subclass of: cohort
has_related_synonym: GRIso
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Genetic Research in Isolated
annotated property: has_related_synonym
annotated target: GRIso
has synonym type: abbreviation

Genetics of diabetes Audit and Research
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: GoDARTS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Genetics of diabetes Audit and Research
annotated property: has_related_synonym
annotated target: GoDARTS
has synonym type: abbreviation

Genetics of Healthy Aging
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Netherlands
has_related_synonym: GEHA
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Genetics of Healthy Aging
annotated property: has_related_synonym
annotated target: GEHA
has synonym type: abbreviation

GenomeAsia 100K project
type: Class
subclass of: cohort
has_related_synonym: GenomeAsia100K
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: GenomeAsia 100K project
annotated property: has_related_synonym
annotated target: GenomeAsia100K
has synonym type: abbreviation

German Multiple Myeloma Study Group
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Germany
has_related_synonym: GMMG
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: German Multiple Myeloma Study Group
annotated property: has_related_synonym
annotated target: GMMG
has synonym type: abbreviation

Ghana Prostate Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Ghana
has_related_synonym: GPS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Ghana Prostate Study
annotated property: has_related_synonym
annotated target: GPS
has synonym type: abbreviation

Glaucoma Inheritance Study in Tasmania
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Australia
has_related_synonym: GIST
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Glaucoma Inheritance Study in Tasmania
annotated property: has_related_synonym
annotated target: GIST
has synonym type: abbreviation

Greece Hellenic Isolated Cohorts
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Greece
has_related_synonym: HELIC
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Greece Hellenic Isolated Cohorts
annotated property: has_related_synonym
annotated target: HELIC
has synonym type: abbreviation

Health and Retirement Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: HRS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Health and Retirement Study
annotated property: has_related_synonym
annotated target: HRS
has synonym type: abbreviation

Health2000 Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Finland
has_related_synonym: Health2000
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Health2000 Study
annotated property: has_related_synonym
annotated target: Health2000
has synonym type: abbreviation

Heart Protection Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: HPS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Heart Protection Study
annotated property: has_related_synonym
annotated target: HPS
has synonym type: abbreviation

Hoorn Diabetes Care System
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Netherlands
has_related_synonym: DCS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Hoorn Diabetes Care System
annotated property: has_related_synonym
annotated target: DCS
has synonym type: abbreviation

Hospital Discharge Register Sweden
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Sweden
has_related_synonym: HDR
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Hospital Discharge Register Sweden
annotated property: has_related_synonym
annotated target: HDR
has synonym type: abbreviation

Human Genetics Initiative
type: Class
subclass of: cohort aggregation
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: HGI
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Human Genetics Initiative
annotated property: has_related_synonym
annotated target: HGI
has synonym type: abbreviation

Hunter Community Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Australia
has_related_synonym: HCS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Hunter Community Study
annotated property: has_related_synonym
annotated target: HCS
has synonym type: abbreviation

Icelandic Cancer Registry
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Iceland
has_related_synonym: ICR
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Icelandic Cancer Registry
annotated property: has_related_synonym
annotated target: ICR
has synonym type: abbreviation

Identification of Men with a genetic predisposition to ProstAte Cancer
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: IMPACT
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Identification of Men with a genetic predisposition to ProstAte Cancer
annotated property: has_related_synonym
annotated target: IMPACT
has synonym type: abbreviation

IIBDGC genotyped CD study
type: Class
subclass of: cohort
has_related_synonym: IIBDGC
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: IIBDGC genotyped CD study
annotated property: has_related_synonym
annotated target: IIBDGC
has synonym type: abbreviation

Indiana Sisters Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: ISS
in subset: EGA_subset
in subset: GWAS_subset
in subset: MetaboLight_subset

Axiom
annotated source: Indiana Sisters Study
annotated property: has_related_synonym
annotated target: ISS
has synonym type: abbreviation

INfancia y Medio Ambiente Project
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Spain
has_related_synonym: INMA
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: INfancia y Medio Ambiente Project
annotated property: has_related_synonym
annotated target: INMA
has synonym type: abbreviation

International Cancer Genome Consortium-Chronic Lymphocytic Leukemia
type: Class
subclass of: cohort aggregation
has_related_synonym: ICGC
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: International Cancer Genome Consortium-Chronic Lymphocytic Leukemia
annotated property: has_related_synonym
annotated target: ICGC
has synonym type: abbreviation

International Headache Genetics Consortium
type: Class
subclass of: cohort aggregation
has_related_synonym: IHGC
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: International Headache Genetics Consortium
annotated property: has_related_synonym
annotated target: IHGC
has synonym type: abbreviation

International Multiple Sclerosis Genetics Consortium
type: Class
subclass of: cohort aggregation
has_related_synonym: IMSGC
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: International Multiple Sclerosis Genetics Consortium
annotated property: has_related_synonym
annotated target: IMSGC
has synonym type: abbreviation

International Schizophrenia Consortium
type: Class
subclass of: cohort aggregation
has_related_synonym: ISC
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: International Schizophrenia Consortium
annotated property: has_related_synonym
annotated target: ISC
has synonym type: abbreviation

Italian Network on Genetic Isolates Studies
type: Class
subclass of: cohort aggregation
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Italy
has_related_synonym: INGI
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Italian Network on Genetic Isolates Studies
annotated property: has_related_synonym
annotated target: INGI
has synonym type: abbreviation

Leeds Melanoma Cohort
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: LMC
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Leeds Melanoma Cohort
annotated property: has_related_synonym
annotated target: LMC
has synonym type: abbreviation

Leiden Longevity Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Netherlands
has_related_synonym: LLS
in subset: EGA_subset
in subset: GWAS_subset
in subset: MetaboLight_subset
in subset: PRIDE_subset

Axiom
annotated source: Leiden Longevity Study
annotated property: has_related_synonym
annotated target: LLS
has synonym type: abbreviation

LifeLines
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Netherlands
in subset: EGA_subset
in subset: GWAS_subset

Living Biobank
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: Living-Biobank
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Living Biobank
annotated property: has_related_synonym
annotated target: Living-Biobank
has synonym type: abbreviation

Los Angeles component of The Womens Contraceptive and Reproductive Experiences Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: CARE
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Los Angeles component of The Womens Contraceptive and Reproductive Experiences Study
annotated property: has_related_synonym
annotated target: CARE
has synonym type: abbreviation

Lothian Birth Cohort
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: LBC
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Lothian Birth Cohort
annotated property: has_related_synonym
annotated target: LBC
has synonym type: abbreviation

Lund Stroke Register
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Sweden
has_related_synonym: LSR
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Lund Stroke Register
annotated property: has_related_synonym
annotated target: LSR
has synonym type: abbreviation

Marseille Thrombosis Association Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: France
has_related_synonym: MARTHA
has_related_synonym: Marseille Thrombosis Association
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Marseille Thrombosis Association Study
annotated property: has_related_synonym
annotated target: MARTHA
has synonym type: abbreviation

Axiom
annotated source: Marseille Thrombosis Association Study
annotated property: has_related_synonym
annotated target: Marseille Thrombosis Association
has synonym type: abbreviation

Mexican Biobank
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Mexico
has_related_synonym: MXBB
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Mexican Biobank
annotated property: has_related_synonym
annotated target: MXBB
has synonym type: abbreviation

MIRAGE
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
in subset: EGA_subset
in subset: GWAS_subset

Molecular Genetics of Schizophrenia Collaboration
type: Class
subclass of: cohort
has_related_synonym: MGS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Molecular Genetics of Schizophrenia Collaboration
annotated property: has_related_synonym
annotated target: MGS
has synonym type: abbreviation

MOnica Risk, Genetics, Archiving and Monograph
type: Class
subclass of: cohort
has_related_synonym: MORGAM
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: MOnica Risk, Genetics, Archiving and Monograph
annotated property: has_related_synonym
annotated target: MORGAM
has synonym type: abbreviation

Monitoring of Trends and Determinants in Cardiovascular Disease
type: Class
subclass of: cohort
has_related_synonym: MONICA
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Monitoring of Trends and Determinants in Cardiovascular Disease
annotated property: has_related_synonym
annotated target: MONICA
has synonym type: abbreviation

Multi-Ethnic Study of Atherosclerosis
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: MESA
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Multi-Ethnic Study of Atherosclerosis
annotated property: has_related_synonym
annotated target: MESA
has synonym type: abbreviation

Multicenter Family Study
type: Class
subclass of: cohort
has_related_synonym: MFS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Multicenter Family Study
annotated property: has_related_synonym
annotated target: MFS
has synonym type: abbreviation

Multiethnic Cohort Study of Diet and Health
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: MEC
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Multiethnic Cohort Study of Diet and Health
annotated property: has_related_synonym
annotated target: MEC
has synonym type: abbreviation

Multiple Environmental and Genetic Assessment of Risk Factors for Venous Thrombosis
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Netherlands
has_related_synonym: MEGA
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Multiple Environmental and Genetic Assessment of Risk Factors for Venous Thrombosis
annotated property: has_related_synonym
annotated target: MEGA
has synonym type: abbreviation

National Health Service Blood and Transplant
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: NHSBT
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: National Health Service Blood and Transplant
annotated property: has_related_synonym
annotated target: NHSBT
has synonym type: abbreviation

National Study of Colorectal Cancer Genetics
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: NSCCG
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: National Study of Colorectal Cancer Genetics
annotated property: has_related_synonym
annotated target: NSCCG
has synonym type: abbreviation

Netherlands Twin Registry
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Netherlands
has_related_synonym: NTR
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Netherlands Twin Registry
annotated property: has_related_synonym
annotated target: NTR
has synonym type: abbreviation

New England-based Case-Control Study of Ovarian Cancer
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: NECC
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: New England-based Case-Control Study of Ovarian Cancer
annotated property: has_related_synonym
annotated target: NECC
has synonym type: abbreviation

NIDDK
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
in subset: EGA_subset
in subset: GWAS_subset

Nijmegen Biomedical Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Netherlands
has_related_synonym: NBS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Nijmegen Biomedical Study
annotated property: has_related_synonym
annotated target: NBS
has synonym type: abbreviation

Northern Ireland Cohort for Longitudinal Study of Ageing
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: NICOLA
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Northern Ireland Cohort for Longitudinal Study of Ageing
annotated property: has_related_synonym
annotated target: NICOLA
has synonym type: abbreviation

Northern Sweden Population Health Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Sweden
has_related_synonym: NSPHS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Northern Sweden Population Health Study
annotated property: has_related_synonym
annotated target: NSPHS
has synonym type: abbreviation

Norwegian Mother and Child Cohort study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Norway
has_related_synonym: MOBA
has_related_synonym: MoBa
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Norwegian Mother and Child Cohort study
annotated property: has_related_synonym
annotated target: MOBA
has synonym type: abbreviation

Axiom
annotated source: Norwegian Mother and Child Cohort study
annotated property: has_related_synonym
annotated target: MoBa
has synonym type: abbreviation

Orkney Complex Disease Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: ORCADES
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Orkney Complex Disease Study
annotated property: has_related_synonym
annotated target: ORCADES
has synonym type: abbreviation

Outcome Reduction With Initial Glargine Intervention Trial
type: Class
subclass of: cohort
has_related_synonym: ORIGIN
has_related_synonym: Outcome Reduction With Initial Glargine Intervention
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Outcome Reduction With Initial Glargine Intervention Trial
annotated property: has_related_synonym
annotated target: ORIGIN
has synonym type: abbreviation

Axiom
annotated source: Outcome Reduction With Initial Glargine Intervention Trial
annotated property: has_related_synonym
annotated target: Outcome Reduction With Initial Glargine Intervention
has synonym type: abbreviation

Ovarian Cancer Association Consortium
type: Class
subclass of: cohort
has_related_synonym: OCAC
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Ovarian Cancer Association Consortium
annotated property: has_related_synonym
annotated target: OCAC
has synonym type: abbreviation

Ovarian Cancer Study
type: Class
subclass of: cohort
has_related_synonym: OCS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Ovarian Cancer Study
annotated property: has_related_synonym
annotated target: OCS
has synonym type: abbreviation

Oxford Biobank
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: OBB
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Oxford Biobank
annotated property: has_related_synonym
annotated target: OBB
has synonym type: abbreviation

PanCareLIFE
type: Class
subclass of: cohort
has_related_synonym: PCL
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: PanCareLIFE
annotated property: has_related_synonym
annotated target: PCL
has synonym type: abbreviation

Parkinson Environment and Gene
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: PEG
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Parkinson Environment and Gene
annotated property: has_related_synonym
annotated target: PEG
has synonym type: abbreviation

People of the British Isles
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: PoBI
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: People of the British Isles
annotated property: has_related_synonym
annotated target: PoBI
has synonym type: abbreviation

Physical Activity and Nutrition in Children Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Australia
has_related_synonym: PANIC
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Physical Activity and Nutrition in Children Study
annotated property: has_related_synonym
annotated target: PANIC
has synonym type: abbreviation

Population-based Colonoscopy study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Germany
has_related_synonym: PopCol
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Population-based Colonoscopy study
annotated property: has_related_synonym
annotated target: PopCol
has synonym type: abbreviation

Precocious Coronary Artery Disease Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: India
has_related_synonym: PROCARDIS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Precocious Coronary Artery Disease Study
annotated property: has_related_synonym
annotated target: PROCARDIS
has synonym type: abbreviation

Pressioni Arteriose Monitorate E Loro Associazionie
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Italy
has_related_synonym: PAMELA
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Pressioni Arteriose Monitorate E Loro Associazionie
annotated property: has_related_synonym
annotated target: PAMELA
has synonym type: abbreviation

Prospective Investigation of the Vasculature in Uppsala Seniors
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Sweden
has_related_synonym: PIVUS
in subset: EGA_subset
in subset: GWAS_subset
in subset: MetaboLight_subset

Axiom
annotated source: Prospective Investigation of the Vasculature in Uppsala Seniors
annotated property: has_related_synonym
annotated target: PIVUS
has synonym type: abbreviation

Psoriasis Association Genetics Extension
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: PAGE
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Psoriasis Association Genetics Extension
annotated property: has_related_synonym
annotated target: PAGE
has synonym type: abbreviation

Psychiatric GWAS Consortium
type: Class
subclass of: cohort aggregation
has_related_synonym: PGC
in subset: EGA_subset
in subset: GWAS_subset
in subset: PRIDE_subset

Axiom
annotated source: Psychiatric GWAS Consortium
annotated property: has_related_synonym
annotated target: PGC
has synonym type: abbreviation

Research on Adolescent Development and Relationships
type: Class
subclass of: cohort aggregation
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: Radar
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Research on Adolescent Development and Relationships
annotated property: has_related_synonym
annotated target: Radar
has synonym type: abbreviation

Rotterdam Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Netherlands
has_related_synonym: RS
in subset: EGA_subset
in subset: GWAS_subset
in subset: PRIDE_subset

Axiom
annotated source: Rotterdam Study
annotated property: has_related_synonym
annotated target: RS
has synonym type: abbreviation

Saguenay-Lac-Saint-Jean asthma study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Canada
has_related_synonym: SLSJ
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Saguenay-Lac-Saint-Jean asthma study
annotated property: has_related_synonym
annotated target: SLSJ
has synonym type: abbreviation

Sahlgrenska Academy Study on Ischemic Stroke
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Sweden
has_related_synonym: SAHLSIS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Sahlgrenska Academy Study on Ischemic Stroke
annotated property: has_related_synonym
annotated target: SAHLSIS
has synonym type: abbreviation

SardiNIA Study of Aging
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Italy
has_related_synonym: SardiNIA
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: SardiNIA Study of Aging
annotated property: has_related_synonym
annotated target: SardiNIA
has synonym type: abbreviation

Scania Diabetes Registry
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Sweden
has_related_synonym: SDR
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Scania Diabetes Registry
annotated property: has_related_synonym
annotated target: SDR
has synonym type: abbreviation

Shanghai Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: China
has_related_synonym: Shanghai
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Shanghai Study
annotated property: has_related_synonym
annotated target: Shanghai
has synonym type: abbreviation

Short Course Oncology Treatment trial
type: Class
subclass of: cohort
has_related_synonym: SCOT
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Short Course Oncology Treatment trial
annotated property: has_related_synonym
annotated target: SCOT
has synonym type: abbreviation

Simons Simplex Collection
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: SSC
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Simons Simplex Collection
annotated property: has_related_synonym
annotated target: SSC
has synonym type: abbreviation

Singapore Chinese Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Singapore
has_related_synonym: SCH
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Singapore Chinese Study
annotated property: has_related_synonym
annotated target: SCH
has synonym type: abbreviation

SORCE
type: Class
subclass of: cohort
in subset: EGA_subset
in subset: GWAS_subset

Spit for Science
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: Spit
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Spit for Science
annotated property: has_related_synonym
annotated target: Spit
has synonym type: abbreviation

Sweden Bipolar Disorder Cohort
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Sweden
has_related_synonym: SWEBIC
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Sweden Bipolar Disorder Cohort
annotated property: has_related_synonym
annotated target: SWEBIC
has synonym type: abbreviation

Swedish Twin Registry
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Sweden
has_related_synonym: STR
in subset: EGA_subset
in subset: GWAS_subset
in subset: MetaboLight_subset

Axiom
annotated source: Swedish Twin Registry
annotated property: has_related_synonym
annotated target: STR
has synonym type: abbreviation

Taiwan Type 2 Diabetes Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Taiwan
has_related_synonym: TDS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Taiwan Type 2 Diabetes Study
annotated property: has_related_synonym
annotated target: TDS
has synonym type: abbreviation

TEENs of Attica: Genes and Environment
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Greece
has_related_synonym: TEENAGE
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: TEENs of Attica: Genes and Environment
annotated property: has_related_synonym
annotated target: TEENAGE
has synonym type: abbreviation

The English Longitudinal Study of Ageing
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: ELSA
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: The English Longitudinal Study of Ageing
annotated property: has_related_synonym
annotated target: ELSA
has synonym type: abbreviation

The Fenland Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: Fenland
in subset: EGA_subset
in subset: GWAS_subset
in subset: MetaboLight_subset

Axiom
annotated source: The Fenland Study
annotated property: has_related_synonym
annotated target: Fenland
has synonym type: abbreviation

The Helmholtz-Gemeinschaft Deutscher Forschungszentren
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Germany
has_related_synonym: HGF
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: The Helmholtz-Gemeinschaft Deutscher Forschungszentren
annotated property: has_related_synonym
annotated target: HGF
has synonym type: abbreviation

The MANOLIS cohort
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Greece
has_related_synonym: MANOLIS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: The MANOLIS cohort
annotated property: has_related_synonym
annotated target: MANOLIS
has synonym type: abbreviation

The Netherlands AAA GWAS dataset
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Netherlands
has_related_synonym: Netherlands
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: The Netherlands AAA GWAS dataset
annotated property: has_related_synonym
annotated target: Netherlands
has synonym type: abbreviation

The Norwegian Biobank for Myeloma
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Norway
has_related_synonym: NBM
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: The Norwegian Biobank for Myeloma
annotated property: has_related_synonym
annotated target: NBM
has synonym type: abbreviation

The Pakistan Risk Of Myocardial Infarction Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Pakistan
has_related_synonym: PROMIS
in subset: EGA_subset
in subset: GWAS_subset
in subset: MetaboLight_subset

Axiom
annotated source: The Pakistan Risk Of Myocardial Infarction Study
annotated property: has_related_synonym
annotated target: PROMIS
has synonym type: abbreviation

The Secondary Manifestations of ARTerial disease study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Netherlands
has_related_synonym: SMART
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: The Secondary Manifestations of ARTerial disease study
annotated property: has_related_synonym
annotated target: SMART
has synonym type: abbreviation

The Hellenic study of Interactions between Single nucleotide polymorphisms and Eating in Atherosclerosis Susceptibility
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Greece
has_related_synonym: HSIEA
has_related_synonym: THISEAS
has_related_synonym: The Hellenic study of Interactions between SNPs & Eating in Atherosclerosis
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: The Hellenic study of Interactions between Single nucleotide polymorphisms and Eating in Atherosclerosis Susceptibility
annotated property: has_related_synonym
annotated target: HSIEA
has synonym type: abbreviation

Axiom
annotated source: The Hellenic study of Interactions between Single nucleotide polymorphisms and Eating in Atherosclerosis Susceptibility
annotated property: has_related_synonym
annotated target: THISEAS
has synonym type: abbreviation

Axiom
annotated source: The Hellenic study of Interactions between Single nucleotide polymorphisms and Eating in Atherosclerosis Susceptibility
annotated property: has_related_synonym
annotated target: The Hellenic study of Interactions between SNPs & Eating in Atherosclerosis
has synonym type: abbreviation

Treating to New Targets
type: Class
subclass of: cohort
has_related_synonym: TNT
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Treating to New Targets
annotated property: has_related_synonym
annotated target: TNT
has synonym type: abbreviation

Twins Early Development Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: TEDS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Twins Early Development Study
annotated property: has_related_synonym
annotated target: TEDS
has synonym type: abbreviation

Type 1 Diabetes Genetics Consortium
type: Class
subclass of: cohort
has_related_synonym: T1DGC
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Type 1 Diabetes Genetics Consortium
annotated property: has_related_synonym
annotated target: T1DGC
has synonym type: abbreviation

UK Adult Twin Register
type: Class
subclass of: cohort aggregation
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: TwinsUK
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: UK Adult Twin Register
annotated property: has_related_synonym
annotated target: TwinsUK
has synonym type: abbreviation

UK Biobank
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: UKB
in subset: EGA_subset
in subset: GWAS_subset
in subset: MetaboLight_subset
in subset: PRIDE_subset

Axiom
annotated source: UK Biobank
annotated property: has_related_synonym
annotated target: UKB
has synonym type: abbreviation

UK Brain Expression Consortium
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: UKBEC
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: UK Brain Expression Consortium
annotated property: has_related_synonym
annotated target: UKBEC
has synonym type: abbreviation

UK Childhood Cancer Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: UKCCS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: UK Childhood Cancer Study
annotated property: has_related_synonym
annotated target: UKCCS
has synonym type: abbreviation

UK Household Longitudinal Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: UKHLS
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: UK Household Longitudinal Study
annotated property: has_related_synonym
annotated target: UKHLS
has synonym type: abbreviation

UK Inflammatory Bowel Disease Genetics Consortium
type: Class
subclass of: cohort aggregation
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: UKIBD Genetics Consortium
has_related_synonym: UKIBDGC
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: UK Inflammatory Bowel Disease Genetics Consortium
annotated property: has_related_synonym
annotated target: UKIBD Genetics Consortium
has synonym type: abbreviation

Axiom
annotated source: UK Inflammatory Bowel Disease Genetics Consortium
annotated property: has_related_synonym
annotated target: UKIBDGC
has synonym type: abbreviation

Viking Health Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: VIKING
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Viking Health Study
annotated property: has_related_synonym
annotated target: VIKING
has synonym type: abbreviation

Wellcome Trust Case Control Consortium
type: Class
subclass of: cohort aggregation
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: WTCCC
in subset: EGA_subset
in subset: GWAS_subset

Axiom
annotated source: Wellcome Trust Case Control Consortium
annotated property: has_related_synonym
annotated target: WTCCC
has synonym type: abbreviation

Basquecolon cohort
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Spain
has_related_synonym: BCC
in subset: EGA_subset
in subset: MetaboLight_subset

Axiom
annotated source: Basquecolon cohort
annotated property: has_related_synonym
annotated target: BCC
has synonym type: abbreviation

INTERVAL study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
in subset: EGA_subset
in subset: MetaboLight_subset

CONVERGE
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: China
in subset: EGA_subset
in subset: PRIDE_subset

Gene-Environmental Interaction and phenotype study
type: Class
subclass of: cohort
has_related_synonym: GENIE
in subset: EGA_subset
in subset: PRIDE_subset

Axiom
annotated source: Gene-Environmental Interaction and phenotype study
annotated property: has_related_synonym
annotated target: GENIE
has synonym type: abbreviation

China Atherosclerosis Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: China
has_related_synonym: CAS
in subset: GWAS_subset
in subset: MetaboLight_subset

Axiom
annotated source: China Atherosclerosis Study
annotated property: has_related_synonym
annotated target: CAS
has synonym type: abbreviation

Diabetes Prediction and Prevention
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Finland
has_related_synonym: DIPP
in subset: GWAS_subset
in subset: MetaboLight_subset

Axiom
annotated source: Diabetes Prediction and Prevention
annotated property: has_related_synonym
annotated target: DIPP
has synonym type: abbreviation

Functional genomic diagnostic tools for coronary artery disease
type: Class
subclass of: temporary unclassified
has_related_synonym: FGENTCARD
in subset: GWAS_subset
in subset: MetaboLight_subset

Axiom
annotated source: Functional genomic diagnostic tools for coronary artery disease
annotated property: has_related_synonym
annotated target: FGENTCARD
has synonym type: abbreviation

German Chronic Kidney Disease Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Germany
has_related_synonym: GCKD
in subset: GWAS_subset
in subset: MetaboLight_subset

Axiom
annotated source: German Chronic Kidney Disease Study
annotated property: has_related_synonym
annotated target: GCKD
has synonym type: abbreviation

German Longevity Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Germany
has_related_synonym: GLS
in subset: GWAS_subset
in subset: MetaboLight_subset

Axiom
annotated source: German Longevity Study
annotated property: has_related_synonym
annotated target: GLS
has synonym type: abbreviation

Global Registry of Acute Coronary Events
type: Class
subclass of: cohort aggregation
has_related_synonym: GRACE_Genetics
in subset: GWAS_subset
in subset: MetaboLight_subset

Axiom
annotated source: Global Registry of Acute Coronary Events
annotated property: has_related_synonym
annotated target: GRACE_Genetics
has synonym type: abbreviation

TwinGene Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Sweden
subclass of: Restriction
  on property: isSubCohortOf
  some values from: TwinGene Study
has_related_synonym: TwinGene
in subset: GWAS_subset
in subset: MetaboLight_subset

Axiom
annotated source: TwinGene Study
annotated property: has_related_synonym
annotated target: TwinGene
has synonym type: abbreviation

Uppsala Longitudinal Study of Adult Men
type: Class
subclass of: cohort aggregation
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Sweden
has_related_synonym: ULSAM
in subset: GWAS_subset
in subset: MetaboLight_subset

Axiom
annotated source: Uppsala Longitudinal Study of Adult Men
annotated property: has_related_synonym
annotated target: ULSAM
has synonym type: abbreviation

Baltimore Longitudinal Study of Ageing
type: Class
subclass of: cohort aggregation
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: BLSA
in subset: GWAS_subset
in subset: PRIDE_subset

Axiom
annotated source: Baltimore Longitudinal Study of Ageing
annotated property: has_related_synonym
annotated target: BLSA
has synonym type: abbreviation

Motor Neuron Disease Biobank study
type: Class
subclass of: cohort aggregation
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: MNDA
in subset: GWAS_subset
in subset: PRIDE_subset

Axiom
annotated source: Motor Neuron Disease Biobank study
annotated property: has_related_synonym
annotated target: MNDA
has synonym type: abbreviation

Diabetic Cohort
type: Class
subclass of: cohort
has_related_synonym: DC
in subset: GWAS_subset
in subset: PRIDE_subset

Axiom
annotated source: Diabetic Cohort
annotated property: has_related_synonym
annotated target: DC
has synonym type: abbreviation

Ely Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United Kingdom
has_related_synonym: Ely
in subset: GWAS_subset
in subset: PRIDE_subset

Axiom
annotated source: Ely Study
annotated property: has_related_synonym
annotated target: Ely
has synonym type: abbreviation

Genetic Asthma Susceptibility to Indoor Pollution in Peru
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Peru
has_related_synonym: GASP
in subset: GWAS_subset
in subset: PRIDE_subset

Axiom
annotated source: Genetic Asthma Susceptibility to Indoor Pollution in Peru
annotated property: has_related_synonym
annotated target: GASP
has synonym type: abbreviation

Parkinson's Progression Markers Initiative
type: Class
subclass of: cohort aggregation
subclass of: Restriction
  on property: has_data_collection_location
  some values from: United States
has_related_synonym: PPMI
in subset: GWAS_subset
in subset: PRIDE_subset

Axiom
annotated source: Parkinson's Progression Markers Initiative
annotated property: has_related_synonym
annotated target: PPMI
has synonym type: abbreviation

Psychosis Endophenotype Consortium
type: Class
subclass of: cohort aggregation
has_related_synonym: PEC
in subset: GWAS_subset
in subset: PRIDE_subset

Axiom
annotated source: Psychosis Endophenotype Consortium
annotated property: has_related_synonym
annotated target: PEC
has synonym type: abbreviation

Study of Health in Pomerania
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Germany
has_related_synonym: SHIP
in subset: GWAS_subset
in subset: PRIDE_subset

Axiom
annotated source: Study of Health in Pomerania
annotated property: has_related_synonym
annotated target: SHIP
has synonym type: abbreviation

The Cooperative Health Research in South Tyrol
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Italy
has_related_synonym: CHRIS
in subset: GWAS_subset
in subset: PRIDE_subset

Axiom
annotated source: The Cooperative Health Research in South Tyrol
annotated property: has_related_synonym
annotated target: CHRIS
has synonym type: abbreviation

The Health Effects of Arsenic Longitudinal Study
type: Class
subclass of: cohort
subclass of: Restriction
  on property: has_data_collection_location
  some values from: Bangladesh
has_related_synonym: HEALS
in subset: GWAS_subset
in subset: PRIDE_subset

Axiom
annotated source: The Health Effects of Arsenic Longitudinal Study
annotated property: has_related_synonym
annotated target: HEALS
has synonym type: abbreviation

TwinGene Registry
type: Class
subclass of: cohort

temporary unclassified
type: Class

Western Australian Mulga Shrublands Ecoregion
type: NamedIndividual
part of: Australasia Ecoregion
database_cross_reference: WWF:AA1310
database_cross_reference: https://www.worldwildlife.org/ecoregions/aa1310

Australasia Ecoregion
type: NamedIndividual
database_cross_reference: https://www.worldwildlife.org/biomes/deserts-and-xeric-shrublands

Tirari-Sturt Stony Desert Ecoregion
type: NamedIndividual
part of: Australasia Ecoregion
database_cross_reference: WWF:AA1309
database_cross_reference: https://www.worldwildlife.org/ecoregions/aa1309

Simpson Desert Region
type: NamedIndividual
part of: Australasia Ecoregion
database_cross_reference: WWF:AA1308
database_cross_reference: https://www.worldwildlife.org/ecoregions/aa1308

Pilbara Shrublands Ecoregion
type: NamedIndividual
part of: Australasia Ecoregion
database_cross_reference: WWF:AA1307
database_cross_reference: https://www.worldwildlife.org/ecoregions/aa1307

Carnarvon Xeric Shrublands Ecoregion
type: NamedIndividual
part of: Australasia Ecoregion
database_cross_reference: WWF:AA1301
database_cross_reference: https://www.worldwildlife.org/ecoregions/aa1301

Central Ranges Xeric Shrub Ecoregion
type: NamedIndividual
part of: Australasia Ecoregion
database_cross_reference: WWF:AA1302
database_cross_reference: https://www.worldwildlife.org/ecoregions/aa1302

Gibson Desert Ecoregion
type: NamedIndividual
part of: Australasia Ecoregion
database_cross_reference: WWF:AA1303
database_cross_reference: https://www.worldwildlife.org/ecoregions/aa1303

The Great Sandy-Tanami Desert Ecoregion
type: NamedIndividual
part of: Australasia Ecoregion
database_cross_reference: WWF:AA1304
database_cross_reference: https://www.worldwildlife.org/ecoregions/aa1304

Great Victoria Desert Ecoregion
type: NamedIndividual
part of: Australasia Ecoregion
database_cross_reference: WWF:AA1305
database_cross_reference: https://www.worldwildlife.org/ecoregions/aa1305

Nullarbor Plains Xeric Shrubland Ecoregion
type: NamedIndividual
part of: Australasia Ecoregion
database_cross_reference: WWF:AA1306
database_cross_reference: https://www.worldwildlife.org/ecoregions/aa1306

Afrotropical Ecoregion
type: NamedIndividual
database_cross_reference: https://www.worldwildlife.org/biomes/deserts-and-xeric-shrublands

Succulent Karoo Ecoregion
type: NamedIndividual
part of: Afrotropical Ecoregion
database_cross_reference: WWF:AT1322
database_cross_reference: https://www.worldwildlife.org/ecoregions/at1322

Yemen and Saudi Arabia Ecoregion
type: NamedIndividual
part of: Afrotropical Ecoregion
database_cross_reference: WWF:AT1321
database_cross_reference: https://www.worldwildlife.org/ecoregions/at1321

Yemen, Saudi Arabia, and Oman Ecoregion
type: NamedIndividual
part of: Afrotropical Ecoregion
database_cross_reference: WWF:AT1320
database_cross_reference: https://www.worldwildlife.org/ecoregions/at1320

Somali Montane Xeric Woodland Ecoregion
type: NamedIndividual
part of: Afrotropical Ecoregion
database_cross_reference: WWF:AT1319
database_cross_reference: https://www.worldwildlife.org/ecoregions/at1319

Socotran Archipelago Ecoregion
type: NamedIndividual
part of: Afrotropical Ecoregion
database_cross_reference: WWF:AT1318
database_cross_reference: https://www.worldwildlife.org/ecoregions/at1318

Red Sea Coastal Desert Ecoregion
type: NamedIndividual
part of: Afrotropical Ecoregion
database_cross_reference: WWF:AT1317
database_cross_reference: https://www.worldwildlife.org/ecoregions/at1317

Namibian Savanna Woodland Ecoregion
type: NamedIndividual
part of: Afrotropical Ecoregion
database_cross_reference: WWF:AT1316
database_cross_reference: https://www.worldwildlife.org/ecoregions/at1316

Namib Desert Ecoregion
type: NamedIndividual
part of: Afrotropical Ecoregion
database_cross_reference: WWF:AT1315
database_cross_reference: https://www.worldwildlife.org/ecoregions/at1315

Nama Karoo Ecoregion
type: NamedIndividual
part of: Afrotropical Ecoregion
database_cross_reference: WWF:AT1314
database_cross_reference: https://www.worldwildlife.org/ecoregions/at1314

Masai Xeric Grasslands and Shrublands Ecoregion
type: NamedIndividual
part of: Afrotropical Ecoregion
database_cross_reference: WWF:AT1313
database_cross_reference: https://www.worldwildlife.org/ecoregions/at1313

Madagascar Succulent Woodlands Ecoregion
type: NamedIndividual
part of: Afrotropical Ecoregion
database_cross_reference: WWF:AT1312
database_cross_reference: https://www.worldwildlife.org/ecoregions/at1312

Madagascar Spiny Thickets Ecoregion
type: NamedIndividual
part of: Afrotropical Ecoregion
database_cross_reference: WWF:AT1311
database_cross_reference: https://www.worldwildlife.org/ecoregions/at1311

Kaokoveld Desert Ecoregion
type: NamedIndividual
part of: Afrotropical Ecoregion
database_cross_reference: WWF:AT1310
database_cross_reference: https://www.worldwildlife.org/ecoregions/at1310

Kalahari Xeric Savanna Ecoregion
type: NamedIndividual
part of: Afrotropical Ecoregion
database_cross_reference: WWF:AT1309
database_cross_reference: https://www.worldwildlife.org/ecoregions/at1309

Ile Europa and Bassas da India Ecoregion
type: NamedIndividual
part of: Afrotropical Ecoregion
database_cross_reference: WWF:AT1308
database_cross_reference: https://www.worldwildlife.org/ecoregions/at1308

Hobyo Grassland and Shrubland Ecoregion
type: NamedIndividual
part of: Afrotropical Ecoregion
database_cross_reference: WWF:AT1307
database_cross_reference: https://www.worldwildlife.org/ecoregions/at1307

Oman and United Arab Emirates Ecoregion
type: NamedIndividual
part of: Afrotropical Ecoregion
database_cross_reference: WWF:AT1306
database_cross_reference: https://www.worldwildlife.org/ecoregions/at1306

Ethiopian Xeric Grasslands and Shrublands Ecoregion
type: NamedIndividual
part of: Afrotropical Ecoregion
database_cross_reference: WWF:AT1305
database_cross_reference: https://www.worldwildlife.org/ecoregions/at1305

Eritrean Coastal Desert Ecoregion
type: NamedIndividual
part of: Afrotropical Ecoregion
database_cross_reference: WWF:AT1304
database_cross_reference: https://www.worldwildlife.org/ecoregions/at1304

East Saharan Montane Xeric Woodland Ecoregion
type: NamedIndividual
part of: Afrotropical Ecoregion
database_cross_reference: WWF:AT1303
database_cross_reference: https://www.worldwildlife.org/ecoregions/at1303

Oman, Yemen, and Saudi Arabia Ecoregion
type: NamedIndividual
part of: Afrotropical Ecoregion
database_cross_reference: WWF:AT1302
database_cross_reference: https://www.worldwildlife.org/ecoregions/at1302

Aldabra Island Xeric Scrub Ecoregion
type: NamedIndividual
part of: Afrotropical Ecoregion
database_cross_reference: WWF:AT1301
database_cross_reference: https://www.worldwildlife.org/ecoregions/at1301

Indo-Malay Ecoregion
type: NamedIndividual
database_cross_reference: deserts-and-xeric-shrublands

Thar Desert
type: NamedIndividual
part of: Indo-Malay Ecoregion
database_cross_reference: im1304
database_cross_reference: WWF:IM1304
has_related_synonym: Southern Asia: Western India into Pakistan

Northwestern Thorn Scrub Forests
type: NamedIndividual
part of: Indo-Malay Ecoregion
database_cross_reference: im1303
database_cross_reference: WWF:IM1303
has_related_synonym: Southern Asia: Eastern India and western Pakistan

Solar radiation
type: NamedIndividual
process has causal agent: Q525
definition: Stellar radiation emitted from Sol.

example to be eventually removed
type: NamedIndividual
type: curation status specification
editor preferred term: example to be eventually removed

failed exploratory term
type: NamedIndividual
type: obsolescence reason specification
editor preferred term: failed exploratory term
definition: The term was initially used in an attempt to structure part of the ontology, but in retrospect failed to do a good job.
editor note: Terms created as placeholders with the expectation of being permanent should instead be deprecated using the "placeholder removed" (obo:IAO_0000226) justification.
term editor: Person:Alan Ruttenberg
contributor: https://orcid.org/0000-0001-6875-5360
contributor: https://orcid.org/0000-0002-7356-1779

metadata complete
type: NamedIndividual
type: curation status specification
editor preferred term: metadata complete
definition: Class has all its metadata, but is either not guaranteed to be in its final location in the asserted IS_A hierarchy or refers to another class that is not complete.

organizational term
type: NamedIndividual
type: curation status specification
editor preferred term: organizational term
definition: The term was created to ease viewing/sorting terms for development purposes, but will not be included in a release.

ready for release
type: NamedIndividual
type: curation status specification
editor preferred term: ready for release
definition: Class has undergone final review, is ready for use, and will be included in the next release. Any class lacking "ready_for_release" should be considered likely to change place in hierarchy, have its definition refined, or be obsoleted in the next release. Those classes deemed "ready_for_release" will also derived from a chain of ancestor classes that are also "ready_for_release."

metadata incomplete
type: NamedIndividual
type: curation status specification
editor preferred term: metadata incomplete
definition: Class is being worked on; however, the metadata (including definition) are not complete or sufficiently clear to the branch editors.

uncurated
type: NamedIndividual
type: curation status specification
editor preferred term: uncurated
definition: Nothing done yet beyond assigning a unique class ID and proposing a preferred term.

pending final vetting
type: NamedIndividual
type: curation status specification
editor preferred term: pending final vetting
definition: All definitions, placement in the asserted IS_A hierarchy and required minimal metadata are complete. The class is awaiting a final review by someone other than the term editor.

obsolete_core
type: NamedIndividual
definition: Core is an instance of a grouping of terms from an ontology or ontologies. It is used by the ontology to identify main classes.
term editor: PERSON: Alan Ruttenberg
term editor: PERSON: Melanie Courtot
has obsolescence reason: placeholder removed
deprecated: true

placeholder removed
type: NamedIndividual
type: obsolescence reason specification
editor preferred term: placeholder removed
definition: The term was created to temporarily stand in for a semantic purpose, but is no longer needed, typically due to another permanent term being defined.
editor note: This reason is appropriate for a temporary term even if no permanent term is defined; for example if the need for the term no longer exists. If a permanent (replacement) term is defined, the deprecated term should reference the replacement with IAO:0100001. If no replacement is defined, it may be appropriate to reference alternative terms with oboInOwl:consider.
contributor: https://orcid.org/0000-0001-6875-5360
contributor: https://orcid.org/0000-0002-7356-1779

terms merged
type: NamedIndividual
type: obsolescence reason specification
editor preferred term: terms merged
definition: The term has been combined with one or more other terms to create a more encompassing (merged) term.
editor note: The deprecated term should reference the merged term with obo:IAO_0100001. The replacement term should reference the original terms as sources using obo:RO_0001000 (derives_from). An editor note should explain what were the merged terms and the reason for the merge.
contributor: https://orcid.org/0000-0001-6875-5360
contributor: https://orcid.org/0000-0002-7356-1779

term imported
type: NamedIndividual
type: obsolescence reason specification
editor preferred term: term imported
definition: The term has been replaced by a term imported from another ontology.
editor note: This is to be used when the original term has been replaced by a term imported from an other ontology. The deprecated term should reference the imported term with obo:IAO_0100001.
contributor: https://orcid.org/0000-0001-6875-5360
contributor: https://orcid.org/0000-0002-7356-1779

term split
type: NamedIndividual
type: obsolescence reason specification
editor preferred term: term split
definition: The term has been split into two or more new terms.
editor note: This is to be used when a term has been split in two or more new terms. An editor note should indicate the reason for the split. The deprecated term should reference the replacement terms with obo:IAO_0100001.
contributor: https://orcid.org/0000-0001-6875-5360
contributor: https://orcid.org/0000-0002-7356-1779

universal
type: NamedIndividual
type: denotator type
editor preferred term: universal
editor note: Hard to give a definition for. Intuitively a "natural kind" rather than a collection of any old things, which a class is able to be, formally. At the meta level, universals are defined as positives, are disjoint with their siblings, have single asserted parents.
term editor: Alan Ruttenberg
definition source: A Formal Theory of Substances, Qualities, and Universals, http://ontology.buffalo.edu/bfo/SQU.pdf

defined class
type: NamedIndividual
type: denotator type
editor preferred term: defined class
definition: A defined class is a class that is defined by a set of logically necessary and sufficient conditions but is not a universal
editor note: "definitions", in some readings, always are given by necessary and sufficient conditions. So one must be careful (and this is difficult sometimes) to distinguish between defined classes and universal.
term editor: Alan Ruttenberg

named class expression
type: NamedIndividual
type: denotator type
editor preferred term: named class expression
definition: A named class expression is a logical expression that is given a name. The name can be used in place of the expression.
editor note: named class expressions are used in order to have more concise logical definition but their extensions may not be interesting classes on their own. In languages such as OWL, with no provisions for macros, these show up as actuall classes. Tools may with to not show them as such, and to replace uses of the macros with their expansions
term editor: Alan Ruttenberg

to be replaced with external ontology term
type: NamedIndividual
type: curation status specification
editor preferred term: to be replaced with external ontology term
definition: Terms with this status should eventually replaced with a term from another ontology.
term editor: Alan Ruttenberg
definition source: group:OBI

requires discussion
type: NamedIndividual
type: curation status specification
editor preferred term: requires discussion
definition: A term that is metadata complete, has been reviewed, and problems have been identified that require discussion before release. Such a term requires editor note(s) to identify the outstanding issues.
term editor: Alan Ruttenberg
definition source: group:OBI

out of scope
type: NamedIndividual
type: obsolescence reason specification
definition: The term was added to the ontology on the assumption it was in scope, but it turned out later that it was not.
editor note: This obsolesence reason should be used conservatively. Typical valid examples in disease ontologies are: unnecessary class grouping; mistaked creation of a disease associated to a phenotype.
term editor: http://orcid.org/0000-0001-5208-3432
term tracker item: https://github.com/information-artifact-ontology/ontology-metadata/issues/77
ontology term requester: https://orcid.org/0000-0001-5208-3432
contributor: https://orcid.org/0000-0001-6875-5360
contributor: https://orcid.org/0000-0002-7356-1779

domain entity does not exist
type: NamedIndividual
type: obsolescence reason specification
definition: The term was added to the ontology on the assumption it was a valid domain entity, but it turns out the entity does not exist in reality.
editor note: This obsolesence reason should be used conservatively. For example: Obsoleting class that describes a breed of cow based on a record in an existing database, that was later retracted as faulty (breed does not exist). Do not use this term to obsolete a historic concept (that was once valid, but not anymore).
term editor: http://orcid.org/0000-0002-4142-7153
term tracker item: https://github.com/information-artifact-ontology/ontology-metadata/issues/136
ontology term requester: https://orcid.org/0000-0002-4142-7153

inferring direct neg reg edge from input to regulatory subfunction
type: Imp
body: IndividualPropertyAtom
  property predicate: input of
  argument1: B
  argument2: C
body: IndividualPropertyAtom
  property predicate: enabled by
  argument1: A
  argument2: B
body: IndividualPropertyAtom
  property predicate: has negative regulatory component activity
  argument1: D
  argument2: C
head: IndividualPropertyAtom
  property predicate: directly negatively regulates
  argument1: A
  argument2: D

inferring direct positive reg edge from input to regulatory subfunction
type: Imp
body: IndividualPropertyAtom
  property predicate: input of
  argument1: B
  argument2: C
body: IndividualPropertyAtom
  property predicate: enabled by
  argument1: A
  argument2: B
body: IndividualPropertyAtom
  property predicate: has positive regulatory component activity
  argument1: D
  argument2: C
head: IndividualPropertyAtom
  property predicate: directly positively regulates
  argument1: A
  argument2: D

effector input is compound function input
type: Imp
body: IndividualPropertyAtom
  property predicate: has effector activity
  argument1: mf
  argument2: eff
body: IndividualPropertyAtom
  property predicate: has input
  argument1: eff
  argument2: in
head: IndividualPropertyAtom
  property predicate: has input
  argument1: mf
  argument2: in

Input of effector is input of its parent MF
type: Imp
body: IndividualPropertyAtom
  property predicate: has effector activity
  argument1: mf
  argument2: eff
body: IndividualPropertyAtom
  property predicate: has input
  argument1: mf
  argument2: in
head: IndividualPropertyAtom
  property predicate: has input
  argument1: eff
  argument2: in

if effector directly negatively regulates X, its parent MF directly negatively regulates X
type: Imp
body: IndividualPropertyAtom
  property predicate: directly negatively regulates
  argument1: mf
  argument2: mf2
body: IndividualPropertyAtom
  property predicate: has effector activity
  argument1: mf
  argument2: eff
head: IndividualPropertyAtom
  property predicate: directly negatively regulates
  argument1: eff
  argument2: mf2

'causally downstream of' and 'overlaps' should be disjoint properties (a SWRL rule is required because these are non-simple properties).
type: Imp
body: IndividualPropertyAtom
  property predicate: overlaps
  argument1: x
  argument2: y
body: IndividualPropertyAtom
  property predicate: causally downstream of
  argument1: x
  argument2: y
head: ClassAtom
  class predicate: Nothing
  argument1: y
head: ClassAtom
  class predicate: Nothing
  argument1: x

'causally upstream of' and 'overlaps' should be disjoint properties (a SWRL rule is required because these are non-simple properties).
type: Imp
body: IndividualPropertyAtom
  property predicate: overlaps
  argument1: x
  argument2: y
body: IndividualPropertyAtom
  property predicate: causally upstream of
  argument1: x
  argument2: y
head: ClassAtom
  class predicate: Nothing
  argument1: y
head: ClassAtom
  class predicate: Nothing
  argument1: x