Date the EnzymeML Document was modified.
Contains descriptions of all authors that are part of the experiment.
Contains descriptions of all vessels that are part of the experiment.
Contains descriptions of all proteins that are part of the experiment that may be referenced in reactions, measurements, and equations.
Contains descriptions of all complexes that are part of the experiment that may be referenced in reactions, measurements, and equations.
Contains descriptions of all reactants that are part of the experiment that may be referenced in reactions, measurements, and equations.
Contains descriptions of all reactions that are part of the experiment.
Contains descriptions of all measurements that are part of the experiment.
Contains descriptions of all equations that are part of the experiment.
Contains descriptions of all parameters that are part of the experiment and may be used in equations.
Contains references to publications, databases, and arbitrary links to the web.
Given name of the author or contributor.
Family name of the author or contributor.
Email address of the author or contributor.
Whether the volume of the vessel is constant or not. Default is True.
Identifier of the protein, such as a UniProt ID, or a custom identifier.
Whether the concentration of the protein is constant through the experiment or not. Default is True.
Identifier of the vessel this protein has been applied to.
Expression host organism of the protein.
Taxonomy identifier of the expression host.
List of references to publications, database entries, etc. that describe or reference the protein.
Whether the concentration of the complex is constant through the experiment or not. Default is False.
Unique identifier of the vessel this complex has been used in.
Identifier of the small molecule, such as a Pubchem ID, ChEBI ID, or a custom identifier.
Whether the concentration of the small molecule is constant through the experiment or not. Default is False.
Identifier of the vessel this small molecule has been used in.
Canonical Simplified Molecular-Input Line-Entry System (SMILES) encoding of the small molecule.
International Chemical Identifier (InChI) encoding of the small molecule.
Hashed International Chemical Identifier (InChIKey) encoding of the small molecule.
List of synonymous names for the small molecule.
List of references to publications, database entries, etc. that describe or reference the small molecule.
Whether the reaction is reversible or irreversible. Default is False.
Mathematical expression of the reaction.
List of reactants that are part of the reaction.
List of products that are part of the reaction.
List of reaction elements that are not part of the reaction but influence it.
Internal identifier to either a protein or reactant defined in the EnzymeML Document.
Float number representing the associated stoichiometry.
Identifier of a defined species (SmallMolecule, Protein, Complex). Represents the left hand side of the equation.
Mathematical expression of the equation. Represents the right hand side of the equation.
List of variables that are part of the equation
Numerical value of the estimated parameter.
Initial value that was used for the parameter estimation.
Upper bound for the parameter value that was used for the parameter estimation
Lower bound for the parameter value that was used for the parameter estimation
Whether this parameter should be varied or not in the context of an optimization.
Standard error of the estimated parameter.
Specifies if this parameter is constant. Default is True.
Measurement data of all species that were part of the measurement. A species refers to a Protein, Complex, or SmallMolecule.
User-defined group ID to signal relationships between measurements.
Unit of the temperature of the measurement.
Unique identifier of the unit definition.
Common or human-readable name of the unit definition.
Base or factor units that define this unit.
Kind of the base unit (e.g., meter, kilogram, second).
Exponent of the base unit in the unit definition.
Power-of-ten scale applied to the base unit.