/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by The HDF Group. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* * This example illustrates how to create a compressed dataset. * It is used in the HDF5 Tutorial. */ #include "hdf5.h" #define FILE "cmprss.h5" #define RANK 2 #define DIM0 100 #define DIM1 20 int main(void) { hid_t file_id, dataset_id, dataspace_id; /* identifiers */ hid_t plist_id; size_t nelmts; unsigned flags, filter_info; H5Z_filter_t filter_type; herr_t status; hsize_t dims[2]; hsize_t cdims[2]; int i, j, numfilt; int buf[DIM0][DIM1]; int rbuf[DIM0][DIM1]; /* Uncomment these variables to use SZIP compression unsigned szip_options_mask; unsigned szip_pixels_per_block; */ /* Create a file. */ file_id = H5Fcreate(FILE, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); /* Create dataset "Compressed Data" in the group using absolute name. */ dims[0] = DIM0; dims[1] = DIM1; dataspace_id = H5Screate_simple(RANK, dims, NULL); plist_id = H5Pcreate(H5P_DATASET_CREATE); /* Dataset must be chunked for compression */ cdims[0] = 20; cdims[1] = 20; status = H5Pset_chunk(plist_id, 2, cdims); /* Set ZLIB / DEFLATE Compression using compression level 6. * To use SZIP Compression comment out these lines. */ status = H5Pset_deflate(plist_id, 6); /* Uncomment these lines to set SZIP Compression szip_options_mask = H5_SZIP_NN_OPTION_MASK; szip_pixels_per_block = 16; status = H5Pset_szip (plist_id, szip_options_mask, szip_pixels_per_block); */ dataset_id = H5Dcreate2(file_id, "Compressed_Data", H5T_STD_I32BE, dataspace_id, H5P_DEFAULT, plist_id, H5P_DEFAULT); for (i = 0; i < DIM0; i++) for (j = 0; j < DIM1; j++) buf[i][j] = i + j; status = H5Dwrite(dataset_id, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf); status = H5Sclose(dataspace_id); status = H5Dclose(dataset_id); status = H5Pclose(plist_id); status = H5Fclose(file_id); /* Now reopen the file and dataset in the file. */ file_id = H5Fopen(FILE, H5F_ACC_RDWR, H5P_DEFAULT); dataset_id = H5Dopen2(file_id, "Compressed_Data", H5P_DEFAULT); /* Retrieve filter information. */ plist_id = H5Dget_create_plist(dataset_id); numfilt = H5Pget_nfilters(plist_id); printf("Number of filters associated with dataset: %i\n", numfilt); for (i = 0; i < numfilt; i++) { nelmts = 0; filter_type = H5Pget_filter2(plist_id, i, &flags, &nelmts, NULL, 0, NULL, &filter_info); printf("Filter Type: "); switch (filter_type) { case H5Z_FILTER_DEFLATE: printf("H5Z_FILTER_DEFLATE\n"); break; case H5Z_FILTER_SZIP: printf("H5Z_FILTER_SZIP\n"); break; default: printf("Other filter type included.\n"); } } status = H5Dread(dataset_id, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf); status = H5Dclose(dataset_id); status = H5Pclose(plist_id); status = H5Fclose(file_id); }