/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by The HDF Group. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /************************************************************ Create two datasets within groups. ************************************************************/ package examples.intro; import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5_CreateGroupDataset { private static String FILENAME = "H5_CreateGroupDataset.h5"; private static String GROUPNAME = "MyGroup"; private static String GROUPNAME_A = "GroupA"; private static String DATASETNAME1 = "dset1"; private static String DATASETNAME2 = "dset2"; private static final int DIM1_X = 3; private static final int DIM1_Y = 3; private static final int DIM2_X = 2; private static final int DIM2_Y = 10; private static void h5_crtgrpd() { long file_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; long dataset_id = HDF5Constants.H5I_INVALID_HID; long group_id = HDF5Constants.H5I_INVALID_HID; long group1_id = HDF5Constants.H5I_INVALID_HID; long group2_id = HDF5Constants.H5I_INVALID_HID; int[][] dset1_data = new int[DIM1_X][DIM1_Y]; int[][] dset2_data = new int[DIM2_X][DIM2_Y]; long[] dims1 = {DIM1_X, DIM1_Y}; long[] dims2 = {DIM2_X, DIM2_Y}; // Initialize the first dataset. for (int indx = 0; indx < DIM1_X; indx++) for (int jndx = 0; jndx < DIM1_Y; jndx++) dset1_data[indx][jndx] = jndx + 1; // Initialize the second dataset. for (int indx = 0; indx < DIM2_X; indx++) for (int jndx = 0; jndx < DIM2_Y; jndx++) dset2_data[indx][jndx] = jndx + 1; // Create a file. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); // Create a group named "/MyGroup" in the file. if (file_id >= 0) { group1_id = H5.H5Gcreate(file_id, "/" + GROUPNAME, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); // Create group "Group_A" in group "MyGroup" using absolute name. if (group1_id >= 0) { group2_id = H5.H5Gcreate(file_id, "/" + GROUPNAME + "/" + GROUPNAME_A, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); if (group2_id >= 0) H5.H5Gclose(group2_id); } if (group1_id >= 0) H5.H5Gclose(group1_id); } } catch (Exception e) { e.printStackTrace(); } // Create the data space for the first dataset. try { dataspace_id = H5.H5Screate_simple(2, dims1, null); } catch (Exception e) { e.printStackTrace(); } // Create the dataset in group "MyGroup". try { if ((file_id >= 0) && (dataspace_id >= 0)) dataset_id = H5.H5Dcreate( file_id, "/" + GROUPNAME + "/" + DATASETNAME1, HDF5Constants.H5T_STD_I32BE, dataspace_id, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); } // Write the first dataset. try { if (dataset_id >= 0) H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset1_data); } catch (Exception e) { e.printStackTrace(); } // Close the data space for the first dataset. try { if (dataspace_id >= 0) H5.H5Sclose(dataspace_id); dataspace_id = HDF5Constants.H5I_INVALID_HID; } catch (Exception e) { e.printStackTrace(); } // Close the first dataset. try { if (dataset_id >= 0) H5.H5Dclose(dataset_id); dataset_id = HDF5Constants.H5I_INVALID_HID; } catch (Exception e) { e.printStackTrace(); } // Open an existing group of the specified file. try { if (file_id >= 0) group_id = H5.H5Gopen(file_id, "/" + GROUPNAME + "/" + GROUPNAME_A, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); } // Create the data space for the second dataset. try { dataspace_id = H5.H5Screate_simple(2, dims2, null); } catch (Exception e) { e.printStackTrace(); } // Create the second dataset in group "Group_A". try { if ((group_id >= 0) && (dataspace_id >= 0)) dataset_id = H5.H5Dcreate(group_id, DATASETNAME2, HDF5Constants.H5T_STD_I32BE, dataspace_id, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); } // Write the second dataset. try { if (dataset_id >= 0) H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset2_data); } catch (Exception e) { e.printStackTrace(); } // Close the data space for the second dataset. try { if (dataspace_id >= 0) H5.H5Sclose(dataspace_id); } catch (Exception e) { e.printStackTrace(); } // Close the second dataset. try { if (dataset_id >= 0) H5.H5Dclose(dataset_id); } catch (Exception e) { e.printStackTrace(); } // Close the group. try { if (group_id >= 0) H5.H5Gclose(group_id); } catch (Exception e) { e.printStackTrace(); } // Close the file. try { if (file_id >= 0) H5.H5Fclose(file_id); } catch (Exception e) { e.printStackTrace(); } } public static void main(String[] args) { H5_CreateGroupDataset.h5_crtgrpd(); } }