itk_module_test() set( ITKIONIFTITests itkNiftiImageIOTest.cxx itkNiftiImageIOTest2.cxx itkNiftiImageIOTest3.cxx itkNiftiImageIOTest4.cxx itkNiftiImageIOTest5.cxx itkNiftiImageIOTest6.cxx itkNiftiImageIOTest7.cxx itkNiftiImageIOTest8.cxx itkNiftiImageIOTest9.cxx itkNiftiImageIOTest10.cxx itkNiftiImageIOTest11.cxx itkNiftiImageIOTest12.cxx itkNiftiImageIOTest13.cxx itkNiftiImageIOTest14.cxx itkNiftiLargeImageRegionReadTest.cxx itkNiftiReadAnalyzeTest.cxx itkNiftiReadWriteDirectionTest.cxx itkExtractSlice.cxx itkNiftiWriteCoerceOrthogonalDirectionTest.cxx ) # For itkNiftiImageIOTest.h. include_directories(${ITKIONIFTI_SOURCE_DIR}/test) add_library(ITKIONIFTI-TestSupport itkNiftiImageIOTestHelper.cxx) itk_module_target_label(ITKIONIFTI-TestSupport) target_link_libraries( ITKIONIFTI-TestSupport LINK_PUBLIC ${ITKIONIFTI-Test_LIBRARIES} ) list(APPEND ITKIONIFTI-Test_LIBRARIES ITKIONIFTI-TestSupport) createtestdriver(ITKIONIFTI "${ITKIONIFTI-Test_LIBRARIES}" "${ITKIONIFTITests}") itk_add_test( NAME itkNiftisform2DirectionDef.nii.gz COMMAND ITKIONIFTITestDriver itkNiftiImageIOTest ${ITK_TEST_OUTPUT_DIR}/itkNiftisform2DirectionDefNiiGzTest.nii.gz DATA{${ITK_DATA_ROOT}/Input/itkNiftisform2DirectionDef.nii.gz} ) itk_add_test( NAME itkNiftiIOBigEndianCompressed.hdr COMMAND ITKIONIFTITestDriver itkNiftiImageIOTest ${ITK_TEST_OUTPUT_DIR}/itkNiftiIOBigEndianCompressedHdrTest.nii.gz itkNiftiIOBigEndianCompressed.hdr DATA{${ITK_DATA_ROOT}/Input/BigEndianCompressed.hdr} ) itk_add_test( NAME itkNiftiIOBigEndianCompressed.img COMMAND ITKIONIFTITestDriver itkNiftiImageIOTest ${ITK_TEST_OUTPUT_DIR}/itkNiftiIOBigEndianCompressedImgTest.nii.gz itkNiftiIOBigEndianCompressed.img DATA{${ITK_DATA_ROOT}/Input/BigEndianCompressed.img} ) itk_add_test( NAME itkNiftiIOBigEndianCompressed.img.gz COMMAND ITKIONIFTITestDriver itkNiftiImageIOTest ${ITK_TEST_OUTPUT_DIR}/itkNiftiIOBigEndianCompressedImgGz.nii.gz itkNiftiIOBigEndianCompressed.img.gz DATA{${ITK_DATA_ROOT}/Input/BigEndianCompressed.img.gz} ) itk_add_test( NAME itkNiftiIOBigEndian COMMAND ITKIONIFTITestDriver itkNiftiImageIOTest ${ITK_TEST_OUTPUT_DIR}/itkNiftiIOBigEndianTest.nii.gz itkNiftiIOBigEndian DATA{${ITK_DATA_ROOT}/Input/BigEndian.hdr,BigEndian.mhd,BigEndian.img} ) itk_add_test( NAME itkNiftiIOLittleEndianCompressed COMMAND ITKIONIFTITestDriver itkNiftiImageIOTest ${ITK_TEST_OUTPUT_DIR}/itkNiftiIOLittleEndianCompressedTest.nii.gz itkNiftiImageIOTest DATA{${ITK_DATA_ROOT}/Input/LittleEndianCompressed.hdr,LittleEndianCompressed.img.gz} ) itk_add_test( NAME itkNiftiIOLittleEndian COMMAND ITKIONIFTITestDriver itkNiftiImageIOTest ${ITK_TEST_OUTPUT_DIR}/itkNiftiIOLittleEndianCompressedTest.nii.gz itkNiftiIOLittleEndian DATA{${ITK_DATA_ROOT}/Input/LittleEndian.hdr,LittleEndian.mhd,LittleEndian.img} ) itk_add_test( NAME itkNiftiIOInternalTests COMMAND ITKIONIFTITestDriver itkNiftiImageIOTest ${ITK_TEST_OUTPUT_DIR}/itkNiftiIOInternalTestsTest.nii.gz ) itk_add_test( NAME itkNiftiIOShouldFail COMMAND ITKIONIFTITestDriver itkNiftiImageIOTest2 ${ITK_TEST_OUTPUT_DIR} itkNiftiIOShouldFail false DATA{${ITK_DATA_ROOT}/Input/ramp.gipl} ) itk_add_test( NAME itkNiftiIOShouldSucceed COMMAND ITKIONIFTITestDriver itkNiftiImageIOTest2 ${ITK_TEST_OUTPUT_DIR} itkNiftiIOShouldSucceed true DATA{${ITK_DATA_ROOT}/Input/LittleEndian.hdr,LittleEndian.mhd,LittleEndian.img} ) itk_add_test( NAME itkDirCosinesTest COMMAND ITKIONIFTITestDriver itkNiftiImageIOTest4 ${ITK_TEST_OUTPUT_DIR} ) itk_add_test( NAME itkNiftiSlopeInterceptTest COMMAND ITKIONIFTITestDriver itkNiftiImageIOTest5 ${ITK_TEST_OUTPUT_DIR} ) itk_add_test( NAME itkNiftiVectorImageTest2 COMMAND ITKIONIFTITestDriver itkNiftiImageIOTest6 ${ITK_TEST_OUTPUT_DIR} ) itk_add_test( NAME itkNiftiDiffusionTensor3dImageTest COMMAND ITKIONIFTITestDriver itkNiftiImageIOTest7 ${ITK_TEST_OUTPUT_DIR} ) itk_add_test( NAME itkNiftiSymmetricSecondRankTensorImageTest COMMAND ITKIONIFTITestDriver itkNiftiImageIOTest8 ${ITK_TEST_OUTPUT_DIR} ) itk_add_test( NAME itkNiftiRGBImageTest COMMAND ITKIONIFTITestDriver itkNiftiImageIOTest9 ${ITK_TEST_OUTPUT_DIR} RGBImage.nii.gz ) itk_add_test( NAME itkNiftiRGBAImageTest COMMAND ITKIONIFTITestDriver itkNiftiImageIOTest10 ${ITK_TEST_OUTPUT_DIR} RGBAImage.nii.gz ) itk_add_test( NAME itkNiftiVectorImageTest COMMAND ITKIONIFTITestDriver itkNiftiImageIOTest3 ${ITK_TEST_OUTPUT_DIR} ) itk_add_test( NAME itkNiftiDimensionLimitsTest COMMAND ITKIONIFTITestDriver itkNiftiImageIOTest11 ${ITK_TEST_OUTPUT_DIR} SizeFailure.nii.gz ) itk_add_test( NAME itkNiftiLargeRGBTest COMMAND ITKIONIFTITestDriver itkNiftiImageIOTest12 ${ITK_TEST_OUTPUT_DIR} LargeRGBImage.nii.gz ) itk_add_test( NAME itkNiftiReadAnalyzeTest COMMAND ITKIONIFTITestDriver itkNiftiReadAnalyzeTest ${ITK_TEST_OUTPUT_DIR} ) itk_add_test( NAME itkExtractSliceSlopeInterceptUCHAR COMMAND ITKIONIFTITestDriver --compare DATA{Baseline/SlopeInterceptUCHAR-midSlice.nrrd} ${ITK_TEST_OUTPUT_DIR}/SlopeInterceptUCHAR-midSlice.nrrd itkExtractSlice DATA{Input/SlopeInterceptUCHAR.nii.gz} ${ITK_TEST_OUTPUT_DIR}/SlopeInterceptUCHAR-midSlice.nrrd ) itk_add_test( NAME itkNiftiReadWriteDirectionTest COMMAND ITKIONIFTITestDriver itkNiftiReadWriteDirectionTest DATA{${ITK_DATA_ROOT}/Input/LPSLabels.nii.gz} DATA{${ITK_DATA_ROOT}/Input/LPSLabels_noqform.nii.gz} DATA{${ITK_DATA_ROOT}/Input/LPSLabels_nosform.nii.gz} DATA{${ITK_DATA_ROOT}/Input/NonOrthoSform.nii.gz} ${ITK_TEST_OUTPUT_DIR} "test_filled_qform_itkNiftiReadWriteDirectionTest.nii.gz" 8.0 # Tolerance in degrees for direction recovered from non-orthogonal sform ) itk_add_test( NAME itkNiftiReadWriteDirectionSmallVoxelTest COMMAND ITKIONIFTITestDriver itkNiftiReadWriteDirectionTest DATA{Input/SmallVoxels.nii.gz} DATA{Input/SmallVoxels_noqform.nii.gz} DATA{Input/SmallVoxels_nosform.nii.gz} DATA{Input/SmallVoxelsNonOrthoSform.nii.gz} ${ITK_TEST_OUTPUT_DIR} "test_filled_qform_itkNiftiReadWriteDirectionSmallVoxelTest.nii.gz" 4.0 # Tolerance in degrees for direction recovered from non-orthogonal sform ) itk_add_test( NAME itkNiftiSmallVoxelsAffinePrecisionTest COMMAND ITKIONIFTITestDriver itkNiftiImageIOTest13 DATA{Input/SmallVoxels_AffinePrecision.nii.gz} ) itk_add_test( NAME itkNiftiSpatialTemporalUnitsTest COMMAND ITKIONIFTITestDriver itkNiftiImageIOTest14 ${ITK_TEST_OUTPUT_DIR}/xyzt_units_output_check.nii DATA{Input/xyzt_units_test_scl_mm_s.nii.gz} DATA{Input/xyzt_units_test_scl.nii.gz} ) itk_add_test( NAME itkNiftiSpatialTemporalUnitsTest2 COMMAND ITKIONIFTITestDriver itkNiftiImageIOTest14 ${ITK_TEST_OUTPUT_DIR}/xyzt_units_output_check2.nii DATA{Input/xyzt_units_test_scl_mm_s.nii.gz} DATA{Input/xyzt_units_test_scl_mm_s.nii.gz} ) itk_add_test( NAME itkNiftiQFormSFormDifferentSpacingTest COMMAND ITKIONIFTITestDriver itkNiftiImageIOTest13 DATA{Input/ChickenEgg-zeros.nii.gz} ) itk_add_test( NAME itkNiftiLargeImageRegionReadTest COMMAND ITKIONIFTITestDriver itkNiftiLargeImageRegionReadTest ${ITK_TEST_OUTPUT_DIR}/itkNiftiLargeImageRegionReadTest.nii.gz ) itk_add_test( NAME itkNiftiWriteCoerceOrthogonalDirectionTest COMMAND ITKIONIFTITestDriver itkNiftiWriteCoerceOrthogonalDirectionTest ${ITK_TEST_OUTPUT_DIR} )