### A Pluto.jl notebook ###
# v0.20.18

using Markdown
using InteractiveUtils

# ╔═╡ e758152c-b53b-402a-843c-ce2b6c4e33a7
begin
	using YAXArrays, Zarr, NetCDF
    #using EarthDataLab
	using Climatology
	
	get_occa_variable_if_needed("DDetan")
	get_ecco_variable_if_needed("ETAN")

	"Done with packages and test files"
end

# ╔═╡ bc2cd246-4592-484d-8cf3-7385024ff495
md"""
## [YAXArrays.jl](https://github.com/JuliaDataCubes/YAXArrays.jl) : _Yet Another XArray-like Julia Package_

1. reproduce example from the YAXArrays Docs
2. apply to NetCDF files on different grids
3. saving YAXArrays to file
"""

# ╔═╡ b5db84bd-ed81-45dc-a073-e959dc6ca66d
md"""### 1. example from the YAXArrays Docs (Zarr)"""

# ╔═╡ 398e9ec4-32d4-11ed-3808-5d5ea10d29a6
#begin
#	c = EarthDataLab.esdc(res="low")
#	europe = subsetcube(c, region="Europe", time=2000:2016,
#		Variable=["air_temperature_2m", "net_ecosystem", "surface_moisture"])
#end

# ╔═╡ a1d8d423-b9a7-4805-b79f-f8a454a5b6de
md"""### 2. examples with Netcdf files (CF compliant)""" 

# ╔═╡ ceb4dfee-9bd0-48fd-8ab0-e1efbc50bd8d
begin
	file1=joinpath(Climatology.ScratchSpaces.ECCO,"ETAN","ETAN.0007.nc")
	ds=open_dataset(file1,driver=:netcdf)

	ETAN=ds["ETAN"]
    #subsetcube(ETAN,i1=1)
	YAXArray(ETAN)
end

# ╔═╡ e6b2c7fd-b9f5-4405-ba12-e9366232739b
begin
	file2=joinpath(Climatology.ScratchSpaces.OCCA,"DDetan.0406clim.nc")
	OCCA=Cube(open_dataset(file2,driver=:netcdf))
	
	OCCA_K = map(OCCA) do x
		x + 273.15
	end
	
#	subsetcube(OCCA, Latitude_t=17.89)
end

# ╔═╡ ec44bc5a-c714-4800-9887-d7bd61725ed7
md"""### 3. Saving YAXArrays to file

Two output formats are supported : NetCDF and Zarr
"""

# ╔═╡ 68a0e864-d06a-41ba-8162-c8a6b7366940
begin
	p1 = string(tempname(), ".zarr")
	savecube(OCCA, p1, backend = :zarr)			
end

# ╔═╡ c3e282fa-c7ed-4a79-94f9-87b0878805ce
begin
	p2 = string(tempname(), ".nc")
	savecube(OCCA, p2, backend = :netcdf)
end

# ╔═╡ 00000000-0000-0000-0000-000000000001
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uuid = "a4e569a6-e804-4fa4-b0f3-eef7a1d5b13e"
version = "1.10.0"

[[deps.TaskLocalValues]]
git-tree-sha1 = "67e469338d9ce74fc578f7db1736a74d93a49eb8"
uuid = "ed4db957-447d-4319-bfb6-7fa9ae7ecf34"
version = "0.1.3"

[[deps.TermInterface]]
git-tree-sha1 = "d673e0aca9e46a2f63720201f55cc7b3e7169b16"
uuid = "8ea1fca8-c5ef-4a55-8b96-4e9afe9c9a3c"
version = "2.0.0"

[[deps.TerminalLoggers]]
deps = ["LeftChildRightSiblingTrees", "Logging", "Markdown", "Printf", "ProgressLogging", "UUIDs"]
git-tree-sha1 = "f133fab380933d042f6796eda4e130272ba520ca"
uuid = "5d786b92-1e48-4d6f-9151-6b4477ca9bed"
version = "0.1.7"

[[deps.Test]]
deps = ["InteractiveUtils", "Logging", "Random", "Serialization"]
uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
version = "1.11.0"

[[deps.TestItems]]
git-tree-sha1 = "42fd9023fef18b9b78c8343a4e2f3813ffbcefcb"
uuid = "1c621080-faea-4a02-84b6-bbd5e436b8fe"
version = "1.0.0"

[[deps.ThreadingUtilities]]
deps = ["ManualMemory"]
git-tree-sha1 = "d969183d3d244b6c33796b5ed01ab97328f2db85"
uuid = "8290d209-cae3-49c0-8002-c8c24d57dab5"
version = "0.5.5"

[[deps.TimerOutputs]]
deps = ["ExprTools", "Printf"]
git-tree-sha1 = "3748bd928e68c7c346b52125cf41fff0de6937d0"
uuid = "a759f4b9-e2f1-59dc-863e-4aeb61b1ea8f"
version = "0.5.29"

    [deps.TimerOutputs.extensions]
    FlameGraphsExt = "FlameGraphs"

    [deps.TimerOutputs.weakdeps]
    FlameGraphs = "08572546-2f56-4bcf-ba4e-bab62c3a3f89"

[[deps.TimespanLogging]]
deps = ["Distributed", "DistributedNext", "Preferences", "Profile"]
git-tree-sha1 = "9afaa1047fe3d948cbaa1cf1fa6be6856231a3dc"
uuid = "a526e669-04d3-4846-9525-c66122c55f63"
version = "0.1.1"

[[deps.Tokenize]]
git-tree-sha1 = "468b4685af4abe0e9fd4d7bf495a6554a6276e75"
uuid = "0796e94c-ce3b-5d07-9a54-7f471281c624"
version = "0.5.29"

[[deps.TranscodingStreams]]
git-tree-sha1 = "0c45878dcfdcfa8480052b6ab162cdd138781742"
uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa"
version = "0.11.3"

[[deps.Tricks]]
git-tree-sha1 = "372b90fe551c019541fafc6ff034199dc19c8436"
uuid = "410a4b4d-49e4-4fbc-ab6d-cb71b17b3775"
version = "0.1.12"

[[deps.TruncatedStacktraces]]
deps = ["InteractiveUtils", "MacroTools", "Preferences"]
git-tree-sha1 = "ea3e54c2bdde39062abf5a9758a23735558705e1"
uuid = "781d530d-4396-4725-bb49-402e4bee1e77"
version = "1.4.0"

[[deps.URIs]]
git-tree-sha1 = "bef26fb046d031353ef97a82e3fdb6afe7f21b1a"
uuid = "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4"
version = "1.6.1"

[[deps.UUIDs]]
deps = ["Random", "SHA"]
uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4"
version = "1.11.0"

[[deps.UnPack]]
git-tree-sha1 = "387c1f73762231e86e0c9c5443ce3b4a0a9a0c2b"
uuid = "3a884ed6-31ef-47d7-9d2a-63182c4928ed"
version = "1.0.2"

[[deps.Unicode]]
uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5"
version = "1.11.0"

[[deps.Unitful]]
deps = ["Dates", "LinearAlgebra", "Random"]
git-tree-sha1 = "cec2df8cf14e0844a8c4d770d12347fda5931d72"
uuid = "1986cc42-f94f-5a68-af5c-568840ba703d"
version = "1.25.0"
weakdeps = ["ConstructionBase", "ForwardDiff", "InverseFunctions", "LaTeXStrings", "Latexify", "Printf"]

    [deps.Unitful.extensions]
    ConstructionBaseUnitfulExt = "ConstructionBase"
    ForwardDiffExt = "ForwardDiff"
    InverseFunctionsUnitfulExt = "InverseFunctions"
    LatexifyExt = ["Latexify", "LaTeXStrings"]
    PrintfExt = "Printf"

[[deps.Unityper]]
deps = ["ConstructionBase"]
git-tree-sha1 = "25008b734a03736c41e2a7dc314ecb95bd6bbdb0"
uuid = "a7c27f48-0311-42f6-a7f8-2c11e75eb415"
version = "0.1.6"

[[deps.UnsafeAtomics]]
git-tree-sha1 = "b13c4edda90890e5b04ba24e20a310fbe6f249ff"
uuid = "013be700-e6cd-48c3-b4a1-df204f14c38f"
version = "0.3.0"

    [deps.UnsafeAtomics.extensions]
    UnsafeAtomicsLLVM = ["LLVM"]

    [deps.UnsafeAtomics.weakdeps]
    LLVM = "929cbde3-209d-540e-8aea-75f648917ca0"

[[deps.WeakRefStrings]]
deps = ["DataAPI", "InlineStrings", "Parsers"]
git-tree-sha1 = "b1be2855ed9ed8eac54e5caff2afcdb442d52c23"
uuid = "ea10d353-3f73-51f8-a26c-33c1cb351aa5"
version = "1.4.2"

[[deps.WeightedOnlineStats]]
deps = ["LinearAlgebra", "OnlineStats", "OnlineStatsBase", "Statistics", "StatsBase"]
git-tree-sha1 = "97af6ba86935292d5ed4a76cfee6e47d7ce02366"
uuid = "bbac0a1f-7c9d-5672-960b-c6ca726e5d5d"
version = "0.6.3"

    [deps.WeightedOnlineStats.extensions]
    PcaExt = "MultivariateStats"

    [deps.WeightedOnlineStats.weakdeps]
    MultivariateStats = "6f286f6a-111f-5878-ab1e-185364afe411"

[[deps.WoodburyMatrices]]
deps = ["LinearAlgebra", "SparseArrays"]
git-tree-sha1 = "c1a7aa6219628fcd757dede0ca95e245c5cd9511"
uuid = "efce3f68-66dc-5838-9240-27a6d6f5f9b6"
version = "1.0.0"

[[deps.WorkerUtilities]]
git-tree-sha1 = "cd1659ba0d57b71a464a29e64dbc67cfe83d54e7"
uuid = "76eceee3-57b5-4d4a-8e66-0e911cebbf60"
version = "1.6.1"

[[deps.XML2_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Zlib_jll"]
git-tree-sha1 = "59071150afa35787c1656ba234cf03fdf8e2603f"
uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a"
version = "2.13.8+0"

[[deps.XMLDict]]
deps = ["EzXML", "IterTools", "OrderedCollections"]
git-tree-sha1 = "d9a3faf078210e477b291c79117676fca54da9dd"
uuid = "228000da-037f-5747-90a9-8195ccbf91a5"
version = "0.4.1"

[[deps.XZ_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "fee71455b0aaa3440dfdd54a9a36ccef829be7d4"
uuid = "ffd25f8a-64ca-5728-b0f7-c24cf3aae800"
version = "5.8.1+0"

[[deps.Xorg_libpciaccess_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Zlib_jll"]
git-tree-sha1 = "4909eb8f1cbf6bd4b1c30dd18b2ead9019ef2fad"
uuid = "a65dc6b1-eb27-53a1-bb3e-dea574b5389e"
version = "0.18.1+0"

[[deps.YAXArrayBase]]
deps = ["DataStructures", "Dates", "Downloads"]
git-tree-sha1 = "34aa59501d7f992130e664e042210276cb586df4"
uuid = "90b8fcef-0c2d-428d-9c56-5f86629e9d14"
version = "0.7.6"

    [deps.YAXArrayBase.extensions]
    ArchGDALExt = "ArchGDAL"
    AxisArraysExt = "AxisArrays"
    AxisKeysExt = "AxisKeys"
    DimensionalDataExt = "DimensionalData"
    NamedDimsExt = "NamedDims"
    NetCDFExt = "NetCDF"
    ZarrExt = "Zarr"

    [deps.YAXArrayBase.weakdeps]
    ArchGDAL = "c9ce4bd3-c3d5-55b8-8973-c0e20141b8c3"
    AxisArrays = "39de3d68-74b9-583c-8d2d-e117c070f3a9"
    AxisKeys = "94b1ba4f-4ee9-5380-92f1-94cde586c3c5"
    DimensionalData = "0703355e-b756-11e9-17c0-8b28908087d0"
    NamedDims = "356022a1-0364-5f58-8944-0da4b18d706f"
    NetCDF = "30363a11-5582-574a-97bb-aa9a979735b9"
    Zarr = "0a941bbe-ad1d-11e8-39d9-ab76183a1d99"

[[deps.YAXArrays]]
deps = ["CFTime", "DataStructures", "Dates", "DimensionalData", "DiskArrayEngine", "DiskArrayTools", "DiskArrays", "Distributed", "DocStringExtensions", "Glob", "Interpolations", "IntervalSets", "IterTools", "Markdown", "OffsetArrays", "OnlineStats", "Optim", "OrderedCollections", "ParallelUtilities", "ProgressMeter", "Reexport", "Requires", "Statistics", "StatsBase", "Tables", "WeightedOnlineStats", "YAXArrayBase"]
git-tree-sha1 = "9fb9c5d59f595bc4f66bd637299dd25000e46a2b"
uuid = "c21b50f5-aa40-41ea-b809-c0f5e47bfa5c"
version = "0.7.0"

[[deps.Zarr]]
deps = ["AWSS3", "Blosc", "ChunkCodecCore", "ChunkCodecLibZlib", "ChunkCodecLibZstd", "DataStructures", "DateTimes64", "Dates", "DiskArrays", "HTTP", "JSON", "OffsetArrays", "OpenSSL", "Pkg", "URIs", "ZipArchives"]
git-tree-sha1 = "0f914e8d5ff16c9455359948ce79267f52381434"
uuid = "0a941bbe-ad1d-11e8-39d9-ab76183a1d99"
version = "0.9.5"

[[deps.ZipArchives]]
deps = ["ArgCheck", "CodecInflate64", "CodecZlib", "InputBuffers", "PrecompileTools", "TranscodingStreams", "Zlib_jll"]
git-tree-sha1 = "9a08756e326388a9e6c038125aa4686e0467d27b"
uuid = "49080126-0e18-4c2a-b176-c102e4b3760c"
version = "2.5.1"

[[deps.ZipFile]]
deps = ["Libdl", "Printf", "Zlib_jll"]
git-tree-sha1 = "f492b7fe1698e623024e873244f10d89c95c340a"
uuid = "a5390f91-8eb1-5f08-bee0-b1d1ffed6cea"
version = "0.10.1"

[[deps.Zlib_jll]]
deps = ["Libdl"]
uuid = "83775a58-1f1d-513f-b197-d71354ab007a"
version = "1.2.13+1"

[[deps.Zstd_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "446b23e73536f84e8037f5dce465e92275f6a308"
uuid = "3161d3a3-bdf6-5164-811a-617609db77b4"
version = "1.5.7+1"

[[deps.libaec_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "1aa23f01927b2dac46db77a56b31088feee0a491"
uuid = "477f73a3-ac25-53e9-8cc3-50b2fa2566f0"
version = "1.1.4+0"

[[deps.libblastrampoline_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "8e850b90-86db-534c-a0d3-1478176c7d93"
version = "5.11.0+0"

[[deps.libsodium_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "011b0a7331b41c25524b64dc42afc9683ee89026"
uuid = "a9144af2-ca23-56d9-984f-0d03f7b5ccf8"
version = "1.0.21+0"

[[deps.libzip_jll]]
deps = ["Artifacts", "Bzip2_jll", "JLLWrappers", "Libdl", "OpenSSL_jll", "XZ_jll", "Zlib_jll", "Zstd_jll"]
git-tree-sha1 = "86addc139bca85fdf9e7741e10977c45785727b7"
uuid = "337d8026-41b4-5cde-a456-74a10e5b31d1"
version = "1.11.3+0"

[[deps.nghttp2_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d"
version = "1.59.0+0"

[[deps.oneTBB_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "d5a767a3bb77135a99e433afe0eb14cd7f6914c3"
uuid = "1317d2d5-d96f-522e-a858-c73665f53c3e"
version = "2022.0.0+0"

[[deps.p7zip_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "3f19e933-33d8-53b3-aaab-bd5110c3b7a0"
version = "17.4.0+2"
"""

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# ╠═e6b2c7fd-b9f5-4405-ba12-e9366232739b
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# ╟─00000000-0000-0000-0000-000000000001
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