--- name: geopandas description: Guidance and local audit tools for Python workflows that directly use GeoPandas GeoSeries, GeoDataFrame, spatial operations, or vector-data I/O. license: MIT compatibility: Requires Python 3.10+ and uv. Bundled CLIs are local-only; runtime analysis requires the pinned GeoPandas stack below. allowed-tools: Read Write Bash Glob Grep metadata: version: "1.1" skill-author: K-Dense Inc. last-reviewed: "2026-07-23" --- # GeoPandas Use GeoPandas for planar vector data represented as pandas-like `GeoSeries` and `GeoDataFrame` objects. This skill targets stable **GeoPandas 1.1.4** (released 2026-06-26), not the unreleased 1.2 documentation. ## Reproducible environment GeoPandas 1.1.4 requires Python 3.10+; its tagged source requires NumPy >=1.24, pandas >=2.0, Shapely >=2.0, pyproj >=3.5, pyogrio >=0.7.2, and `packaging`. This exact Python 3.12 snapshot was smoke-tested on 2026-07-23: ```bash uv venv --python 3.12 uv pip install \ "geopandas==1.1.4" \ "numpy==2.5.1" \ "pandas==3.0.5" \ "shapely==2.1.2" \ "pyproj==3.7.2" \ "pyogrio==0.13.0" \ "pyarrow==25.0.0" \ "packaging==26.2" ``` Keep optional plotting and PostGIS packages pinned in the project lock as well. Do not mix binary geospatial packages from incompatible package channels. ## Safety and privacy contract - Treat exact coordinates, addresses, parcel boundaries, trajectories, and small-area joins as sensitive. Default reports to counts, categories, coarse extents, and redacted identifiers. Generalize before publication. - Never automatically load a URL, cloud URI, GDAL `/vsi*` path, archive, or geocode an address. Obtain explicit approval, validate provenance and hashes, then stage an unpacked local file in an isolated workspace. - GDAL/OGR drivers, GEOS, PROJ, pyogrio, Shapely, pyproj, and their wheels are a native-code trust boundary. Prefer official wheels/conda-forge, record native versions, restrict drivers, and process untrusted data in a sandbox. - Do not open macro-enabled office files or nested archives through permissive GDAL drivers. The bundled CLIs use an extension allowlist and reject archives. - Read only named database secrets such as `GEOPANDAS_POSTGIS_PASSWORD`; use a secret manager or scoped environment variable. Never embed a password in a URL or source, print an engine/URL, or dump the environment. - Every derived artifact needs source hashes/versions, CRS, operation parameters, predicate, join cardinality, precision/repair choices, and row-count checks. ## Correctness gates Apply these gates before trusting a result: 1. **Identity and provenance** — identify the source layer, stable feature key, duplicate IDs, row count, geometry column, parser/driver, and content hash. 2. **Geometry state** — count null, empty, invalid, mixed, Z/M, and collapsed geometries separately. `None` is missing; an empty Shapely geometry is real. 3. **CRS semantics** — require CRS metadata. `set_crs()` assigns metadata; `to_crs()` transforms coordinates. Never guess a CRS from coordinate ranges. 4. **Units and operation** — GeoPandas is planar. Geographic coordinates are angular; do not use them directly for buffer, distance, area, nearest joins, precision grids, or tolerances. Choose a fit-for-purpose local/equal-area CRS or a geodesic method. 5. **Transform quality** — inspect axis order, area of use, datum pipeline, expected accuracy, ballpark status, and missing grids. Keep PROJ network disabled unless the user explicitly approves grid retrieval. 6. **Topology and precision** — validate before and after repair/overlay. Pick a precision grid from source accuracy and CRS units; arbitrary snapping can collapse features or create bias. 7. **Cardinality** — state expected one-to-one, one-to-many, or many-to-many behavior before `merge`, `sjoin`, or `sjoin_nearest`; audit unmatched and multiplied rows afterward. 8. **Output contract** — use a new output path, preserve a stable feature ID, document schema/CRS/encoding, reopen the artifact, and compare counts/types. ## CRS and antimeridian rules GeoPandas stores CRS as `pyproj.CRS`. Coordinate arrays use traditional GIS `(x, y)` order, while authority definitions can advertise latitude-first axes. Use `Transformer(..., always_xy=True)` for explicit coordinate-array pipelines, and record that choice. `to_crs()` transforms vertices and assumes each segment is straight in the source CRS; it does not transform geodesic arcs. Geometries crossing ±180° or a projection boundary can be badly wrapped. Detect crossings, split/unwrap and densify in a documented geographic representation, transform parts, then validate. Do not use Web Mercator as a general measurement CRS. ```python crs = gdf.crs # a pyproj.CRS when present if crs is None or crs.is_geographic: raise ValueError("Choose a justified projected CRS before planar measurement") unit_names = [axis.unit_name for axis in crs.axis_info] areas = gdf.geometry.area # square CRS units, not automatically square metres ``` See [CRS management](references/crs-management.md). ## Core API decisions ### Data structures - A `GeoDataFrame` can hold multiple geometry columns, each with CRS metadata, but only `active_geometry_name` drives frame-level spatial operations. - Binary `GeoSeries` methods are row-wise and align by index by default. Use `align=False` only when positional pairing is explicitly intended and lengths and order were verified. - Duplicate column names and duplicate feature IDs are ambiguous; reject or resolve them before joins and exports. See [data structures](references/data-structures.md). ### Geometry validity, precision, and union Use `is_valid` and redacted `is_valid_reason()` categories before `make_valid(method="linework"|"structure", keep_collapsed=...)`. Repair can change geometry type or dimension; retain the original and compare counts, area, types, empties, and collapsed parts. `set_precision(grid_size, mode=...)` uses **CRS units** and may remove duplicate vertices or collapse features. `union_all(method="unary", grid_size=...)` is the robust default. Use `coverage` only after `is_valid_coverage()` proves non-overlap and edge matching; use `disjoint_subset` with Shapely >=2.1 when its partitioning assumption is useful. See [geometric operations](references/geometric-operations.md). ### Joins, overlay, clip, and dissolve - `sjoin` predicates are directional: `left.within(right)` is not `left.contains(right)`. `intersects` includes boundary contact; `contains` excludes boundary-only points, while `covers` includes boundary points. - `predicate="dwithin"` requires `distance`; scalar or per-left-row distances are in CRS units. `sjoin_nearest` returns all equidistant nearest matches and does **not** implement a `k=` parameter. - `overlay(..., make_valid=True)` repairs invalid input but can change types; `keep_geom_type=None` drops other types with a warning. Precision mismatch can create slivers; quantify them rather than silently deleting them. - `clip` dissolves the mask. Rectangle clipping is fast but possibly dirty and may omit a line collapsed to a point; validate its output. - `dissolve` combines `groupby.agg` with `union_all`; choose explicit attribute aggregations and audit null group keys. See [spatial analysis](references/spatial-analysis.md). ### I/O, Arrow, and PostGIS GeoPandas 1.x defaults to pyogrio. Driver availability and semantics come from the installed GDAL, not GeoPandas alone. Prefer local GeoPackage for general interchange and WKB GeoParquet for columnar interoperability. GeoParquet defaults to stable schema 1.0.0. Native GeoArrow encodings and bbox covering require schema 1.1.0 and remain less interoperable. A missing GeoParquet `crs` key means `OGC:CRS84`; explicit `crs: null` means unknown—do not conflate them. Reopen and validate every export. Use parameterized SQL and a SQLAlchemy `Engine`/`Connection` for PostGIS. `if_exists="replace"` is destructive; default to `"fail"` and use a transaction. See [data I/O](references/data-io.md). ## Migration checklist For code moving from GeoPandas 0.14 or earlier: - GeoPandas 1.0 supports Shapely >=2 only; PyGEOS, Shapely <2, and the rtree spatial-index backend were removed. - pyogrio replaced Fiona as the installed/default I/O engine. Set `engine=` explicitly and test schema, empty, datetime, encoding, and append behavior. - Replace `sjoin(op=...)` with `predicate=`, `sindex.query_bulk()` with `sindex.query()`, `unary_union` with `union_all()`, and `GeometryArray.data` with `to_numpy()`/`np.asarray`. - Replace `read_file(include_fields=...|ignore_fields=...)` with `columns=`. Use `schema_version=`, not the removed GeoParquet `version=` compatibility. - Do not use removed `geopandas.datasets`, internal `geopandas.io.*` entry points, plot `axes`/`colormap`, or set-operation operators. - `explode()` now defaults `index_parts=False`; a named Series passed to `set_geometry()` supplies the new active-column name; a named right index can replace `index_right` in `sjoin` output. - Do not assign `.crs` to override metadata or rely on deprecated `set_geometry(drop=...)`; use explicit `set_crs()` and rename/drop steps. - GeoPandas 1.1 requires Python >=3.10, pandas >=2.0, NumPy >=1.24, and pyproj >=3.5. Version 1.1.2 fixed SQL injection through a PostGIS geometry-column name; the pinned 1.1.4 includes that fix. ### Plotting and exploration Maps are analytical outputs: label units, classification method, missing data, normalization denominator, and date. `explore()` can expose every attribute in tooltips/popups and contact tile/CDN servers; generalize first and use `tiles=None`, `tooltip=False`, and `popup=False` for a local draft. See [visualization](references/visualization.md). ## Bundled local CLIs All helpers are deterministic, reject network/archive paths, bound input bytes and feature counts, keep imports lazy so `--help` is dependency-free, and emit JSON without coordinates or record identifiers. | CLI | Purpose | |---|---| | `scripts/vector_inventory.py` | Redacted local vector/GeoParquet technical inventory | | `scripts/crs_reprojection_plan.py` | CRS units, axes, candidate transform and antimeridian plan | | `scripts/geometry_validity_report.py` | Dry-run validity audit; optional repair to a new GeoPackage | | `scripts/spatial_join_audit.py` | Predicate semantics, duplicate IDs and join cardinality | | `scripts/export_plan.py` | Non-executing vector/GeoParquet export contract | | `scripts/sensitive_coordinates_checklist.py` | Privacy/generalization release gate | ```bash python skills/geopandas/scripts/vector_inventory.py --help python skills/geopandas/scripts/crs_reprojection_plan.py \ --source-crs EPSG:4326 --target-crs EPSG:32631 python skills/geopandas/scripts/geometry_validity_report.py data.gpkg python skills/geopandas/scripts/spatial_join_audit.py points.gpkg zones.gpkg \ --predicate within --left-id point_id --right-id zone_id python skills/geopandas/scripts/export_plan.py data.gpkg result.parquet \ --format geoparquet --schema-version 1.0.0 \ --stable-id-column feature_id --id-unique-verified python skills/geopandas/scripts/sensitive_coordinates_checklist.py \ --public-output --precise-points --contains-addresses ``` ## Reference index - [Data structures](references/data-structures.md) - [CRS management](references/crs-management.md) - [Geometric operations](references/geometric-operations.md) - [Spatial analysis](references/spatial-analysis.md) - [Data I/O](references/data-io.md) - [Visualization](references/visualization.md) ## Sources (verified 2026-07-23) - [GeoPandas 1.1.4 on PyPI](https://pypi.org/project/geopandas/1.1.4/) — released 2026-06-26. - [GeoPandas 1.1.4 release](https://github.com/geopandas/geopandas/releases/tag/v1.1.4) — bug-fix release. - [GeoPandas 1.1.4 tagged dependencies](https://github.com/geopandas/geopandas/blob/v1.1.4/pyproject.toml). - [Stable GeoPandas documentation](https://geopandas.org/en/stable/). - [GeoPandas 1.0 migration release](https://github.com/geopandas/geopandas/releases/tag/v1.0.0).