# Third-Party Notices

Research Agent Skills is © Kalaris Labs and distributed under the MIT License (see `LICENSE`).

Some skills in `skills/` are adapted from third-party projects licensed under the MIT License. As that license requires, their copyright and permission notices are reproduced below and in `LICENSES/`. Per-skill provenance (source path and pinned revision) is recorded in `third_party/upstream-manifest.json`.

Individual skills may also describe or bundle material under its own license (for example LaTeX templates from publishers, or the `license:` field in a skill's frontmatter naming the license of the software it documents). Those terms apply to that material.

## K-Dense-AI/scientific-agent-skills

- Source: https://github.com/K-Dense-AI/scientific-agent-skills (revision `65d6e786832e`)
- Copyright (c) 2025 K-Dense Inc.
- Skills (159): `13c-metabolic-flux`, `adaptyv`, `aeon`, `alphagenome`, `analytical-method-validation`, `anndata`, `arbor`, `arboreto`, `astropy`, `autoskill`, `benchling-integration`, `bgpt-paper-search`, `bids`, `biopython`, `bioservices`, `bulk-rnaseq`, `cellxgene-census`, `cirq`, `citation-management`, `clinical-decision-support`, `clinical-reports`, `cobrapy`, `consciousness-council`, `dask`, `database-lookup`, `datalad`, `datamol`, `deepchem`, `deeptools`, `depmap`, `dhdna-profiler`, `diffdock`, `dnanexus-integration`, `esm`, `etetoolkit`, `exa-search`, `experimental-design`, `exploratory-data-analysis`, `fictiv`, `flowio`, `fluidsim`, `folklore-variant-evidence`, `generate-image`, `geniml`, `genomic-coordinates`, `genomic-intelligence`, `geomaster`, `geopandas`, `get-available-resources`, `gget`, `ginkgo-cloud-lab`, `gtars`, `histolab`, `hugging-science`, `hypogenic`, `hypothesis-generation`, `imaging-data-commons`, `infographics`, `iso-standards-readiness`, `lab-hardware-cad`, `labarchive-integration`, `lamindb`, `latchbio-integration`, `latex-posters`, `liteparse`, `literature-review`, `markdown-mermaid-writing`, `market-research-reports`, `markitdown`, `matchms`, `matlab`, `matplotlib`, `medchem`, `modal`, `molecular-dynamics`, `molfeat`, `ncats-arax`, `networkx`, `neurokit2`, `neuropixels-analysis`, `nextflow`, `omero-integration`, `onekgpd`, `ontology-term-resolution`, `open-notebook`, `openpiv`, `opentrons-integration`, `optimize-for-gpu`, `pacsomatic`, `paper-lookup`, `paperclip`, `paperzilla`, `parallel-web`, `pathml`, `pathogen-variant-surveillance`, `pathway-enrichment`, `peer-review`, `pennylane`, `pi-agent`, `pkpd-modeling`, `polars`, `polars-bio`, `pptx-posters`, `protocolsio-integration`, `pufferlib`, `pydeseq2`, `pydicom`, `pyhealth`, `pylabrobot`, `pymatgen`, `pymc`, `pymoo`, `pyopenms`, `pysam`, `pytdc`, `pytorch-lightning`, `pyzotero`, `qiskit`, `qutip`, `rdkit`, `relsa-severity-assessment`, `research-grants`, `research-lookup`, `rowan`, `scanpy`, `scholar-evaluation`, `scientific-brainstorming`, `scientific-critical-thinking`, `scientific-schematics`, `scientific-slides`, `scientific-visualization`, `scientific-writing`, `scikit-bio`, `scikit-learn`, `scikit-survival`, `scvelo`, `scvi-tools`, `seaborn`, `shap`, `simpy`, `stable-baselines3`, `statistical-analysis`, `statistical-power`, `statsmodels`, `sympy`, `tamarind`, `tiledbvcf`, `timesfm-forecasting`, `torch-geometric`, `torchdrug`, `transformers`, `treatment-plans`, `umap-learn`, `uncertainty-and-units`, `usfiscaldata`, `vaex`, `venue-templates`, `waypoint-bio`, `zarr-python`

```text
MIT License

Copyright (c) 2025 K-Dense Inc.

Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated documentation files (the "Software"), to deal
in the Software without restriction, including without limitation the rights
to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
copies of the Software, and to permit persons to whom the Software is
furnished to do so, subject to the following conditions:

The above copyright notice and this permission notice shall be included in all
copies or substantial portions of the Software.

THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
SOFTWARE.
```

## orchestra-research/AI-research-SKILLs

- Source: https://github.com/orchestra-research/AI-research-SKILLs (revision `773a52944ba4`)
- Copyright (c) 2025 Claude AI Research Skills Contributors
- Skills (98): `academic-plotting`, `ara-compiler`, `ara-research-manager`, `ara-rigor-reviewer`, `audiocraft-audio-generation`, `autogpt-agents`, `autoresearch`, `awq-quantization`, `axolotl`, `blip-2-vision-language`, `brainstorming-research-ideas`, `chroma`, `clip`, `constitutional-ai`, `creative-thinking-for-research`, `crewai-multi-agent`, `deepspeed`, `distributed-llm-pretraining-torchtitan`, `dspy`, `evaluating-code-models`, `evaluating-cosmos-policy`, `evaluating-llms-harness`, `evolving-ai-agents`, `experiment-tracking-swanlab`, `faiss`, `fine-tuning-openvla-oft`, `fine-tuning-serving-openpi`, `fine-tuning-with-trl`, `gguf-quantization`, `gptq`, `grpo-rl-training`, `guidance`, `hqq-quantization`, `huggingface-accelerate`, `huggingface-tokenizers`, `implementing-llms-litgpt`, `instructor`, `knowledge-distillation`, `lambda-labs-gpu-cloud`, `langchain`, `langsmith-observability`, `llama-cpp`, `llama-factory`, `llamaguard`, `llamaindex`, `llava`, `long-context`, `mamba-architecture`, `miles-rl-training`, `ml-paper-writing`, `ml-training-recipes`, `mlflow`, `modal-serverless-gpu`, `model-merging`, `model-pruning`, `moe-training`, `nanogpt`, `nemo-curator`, `nemo-evaluator-sdk`, `nemo-guardrails`, `nnsight-remote-interpretability`, `openrlhf-training`, `optimizing-attention-flash`, `outlines`, `peft-fine-tuning`, `phoenix-observability`, `pinecone`, `presenting-conference-talks`, `prompt-guard`, `pytorch-fsdp2`, `pytorch-lightning-distributed`, `pyvene-interventions`, `qdrant-vector-search`, `quantizing-models-bitsandbytes`, `ray-data`, `ray-train`, `rwkv-architecture`, `segment-anything-model`, `sentence-transformers`, `sentencepiece`, `serving-llms-vllm`, `sglang`, `simpo-training`, `skypilot-multi-cloud-orchestration`, `slime-rl-training`, `sparse-autoencoder-training`, `speculative-decoding`, `stable-diffusion-image-generation`, `systems-paper-writing`, `tensorboard`, `tensorrt-llm`, `torchforge-rl-training`, `training-llms-megatron`, `transformer-lens-interpretability`, `unsloth`, `verl-rl-training`, `weights-and-biases`, `whisper`

```text
MIT License

Copyright (c) 2025 Claude AI Research Skills Contributors

Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated documentation files (the "Software"), to deal
in the Software without restriction, including without limitation the rights
to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
copies of the Software, and to permit persons to whom the Software is
furnished to do so, subject to the following conditions:

The above copyright notice and this permission notice shall be included in all
copies or substantial portions of the Software.

THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
SOFTWARE.
```