Locus	Class	Family	Category	Chrom	Start	End	Strand	TE_CODING	IntersectedGene	IntersectedGeneType	IntersectedOrientation	IntersectedGeneID	TE_type	TE_5UTR_Intersect	TE_3UTR_Intersect	ClosestUpstream_gn	ClosestUpstream_id	DistUpstream	ClosestDownstream_gn	ClosestDownstream_id	DistDownstream	FANTOM_enhancer	FANTOM_CAGE
ERV316A3_1p36.33	HERV	ERV316A3	oneside	chr1	40736	42273	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4G4P	ENSG00000268020	10200	FAM138A	ENSG00000237613	4655	None	None
HML3_1p36.33	HERV	HML3	oneside	chr1	895544	898699	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL645608.6	ENSG00000272438	6135	AL669831.5	ENSG00000283040	18310	None	None
MER4B_1p36.33	HERV	MER4B	prototype	chr1	1275713	1280788	-	noncoding	LINC01786,SCNN1D	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000230415,ENSG00000162572	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_1p36.33	HERV	HARLEQUIN	prototype	chr1	1412252	1418852	-	coding	ANKRD65	protein_coding	SENSE	ENSG00000235098	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr1:1414899-1414922,chr1:1414939-1414950,chr1:1414986-1414998
HERVIP10F_1p36.33	HERV	HERVIP10F	internal	chr1	1449072	1449730	-	noncoding	ATAD3C	protein_coding	ANTISENSE	ENSG00000215915	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_1p36.32	HERV	HERVL	internal	chr1	2625292	2626288	+	noncoding	MMEL1	protein_coding	ANTISENSE	ENSG00000142606	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p36.32a	HERV	ERVLE	internal	chr1	2637771	2638501	+	noncoding	TTC34	protein_coding	ANTISENSE	ENSG00000215912	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p36.32b	HERV	ERVLE	internal	chr1	2897224	2898434	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589702.1	ENSG00000284745	62224	AL592464.3	ENSG00000287396	79457	None	None
ERVLB4_1p36.32	HERV	ERVLB4	internal	chr1	3002414	3003699	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ACTRT2	ENSG00000169717	17768	AL589702.1	ENSG00000284745	33707	None	None
HML4_1p36.32	HERV	HML4	prototype	chr1	3801472	3806930	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CEP104	ENSG00000116198	5156	LRRC47	ENSG00000130764	4974	None	None
ERVLE_1p36.32c	HERV	ERVLE	internal	chr1	3969312	3969956	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02780	ENSG00000284668	6177	LINC01346	ENSG00000233304	14050	None	None
HERVH_1p36.32a	HERV	HERVH	oneside	chr1	4180997	4187514	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01777	ENSG00000235054	224513	EEF1DP6	ENSG00000229280	5098	None	None
HERVL66_1p36.32	HERV	HERVL66	prototype	chr1	4587568	4591911	-	noncoding	LINC01646	lncRNA	ANTISENSE	ENSG00000232596	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1p36.32b	HERV	HERVH	prototype	chr1	5044796	5053098	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02781	ENSG00000284674	63228	LINC02782	ENSG00000231510	33361	None	None
HERVH_1p36.32c	HERV	HERVH	oneside	chr1	5114487	5118888	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02782	ENSG00000231510	23588	AL139823.1	ENSG00000284616	183040	None	None
ERVLE_1p36.31a	HERV	ERVLE	internal	chr1	5580463	5582352	-	noncoding	AL365255.1	lncRNA	SENSE	ENSG00000236948	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p36.31b	HERV	ERVLE	internal	chr1	5820123	5823005	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL365255.1	ENSG00000236948	151828	MIR4689	ENSG00000264101	39667	None	None
HERVFH21_1p36.31	HERV	HERVFH21	prototype	chr1	6560297	6570283	-	noncoding	TAS1R1	protein_coding	ANTISENSE	ENSG00000173662	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p36.23	HERV	ERV316A3	internal	chr1	7320314	7322250	-	noncoding	CAMTA1	protein_coding	ANTISENSE	ENSG00000171735	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_1p36.23	HERV	HERV9	oneside	chr1	8895877	8899114	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN2P17	ENSG00000238249	1726	AL139415.1	ENSG00000232208	8279	None	None
HML3_1p36.23	HERV	HML3	oneside	chr1	8907810	8908879	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL139415.2	ENSG00000232663	863	AL139415.1	ENSG00000232208	66	None	None
HERVFH21_1p36.23	HERV	HERVFH21	prototype	chr1	8921052	8927668	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL139415.2	ENSG00000232663	11148	CA6	ENSG00000131686	18199	chr1:8923035-8923416,chr1:8924992-8925177,chr1:8925478-8925880,chr1:8925962-8926166,chr1:8926833-8927327,chr1:8927346-8927572	chr1:8926803-8926846,chr1:8926871-8926896
HERVFH19_1p36.23a	HERV	HERVFH19	oneside	chr1	9086800	9088393	+	noncoding	SLC2A5	protein_coding	ANTISENSE	ENSG00000142583	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVFH19_1p36.23b	HERV	HERVFH19	oneside	chr1	9088458	9096029	+	noncoding	SLC2A5	protein_coding	ANTISENSE	ENSG00000142583	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:9088436-9088458,chr1:9094181-9094226
ERVLB4_1p36.22	HERV	ERVLB4	oneside	chr1	9297468	9302644	+	noncoding	SPSB1	protein_coding	SENSE	ENSG00000171621	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_1p36.22a	HERV	ERVL	prototype	chr1	9302227	9304444	+	noncoding	SPSB1	protein_coding	SENSE	ENSG00000171621	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_1p36.22b	HERV	ERVL	internal	chr1	9496729	9497380	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL928921.1	ENSG00000235263	3712	LINC02606	ENSG00000284693	56165	None	None
HUERSP1_1p36.22	HERV	HUERSP1	internal	chr1	10016592	10017954	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBE4B	ENSG00000130939	14878	RBP7	ENSG00000162444	571	None	None
ERVLE_1p36.22	HERV	ERVLE	internal	chr1	10140592	10141777	-	noncoding	UBE4B	protein_coding	ANTISENSE	ENSG00000130939	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p36.22a	HERV	ERV316A3	oneside	chr1	11378008	11383024	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031291.1	ENSG00000284646	58915	MTCYBP45	ENSG00000224338	42233	None	None
ERV316A3_1p36.22b	HERV	ERV316A3	oneside	chr1	11383219	11385505	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031291.1	ENSG00000284646	64126	MTCYBP45	ENSG00000224338	39752	None	None
HERVL_1p36.22	HERV	HERVL	oneside	chr1	12388951	12395953	-	noncoding	VPS13D	protein_coding	ANTISENSE	ENSG00000048707	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p36.21a	HERV	ERVLE	internal	chr1	12669213	12670382	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AADACL4	ENSG00000204518	2127	AC244670.1	ENSG00000226166	22527	None	None
ERVLE_1p36.21b	HERV	ERVLE	internal	chr1	12674390	12677130	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC244670.1	ENSG00000226166	15779	AADACL4	ENSG00000204518	7304	None	None
HERVIP10F_1p36.21	HERV	HERVIP10F	oneside	chr1	12703944	12713280	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AADACL3	ENSG00000188984	2830	AC244670.1	ENSG00000226166	10924	None	None
HML2_1p36.21a	HERV	HML2	oneside	chr1	12780115	12785935	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRAMEF1	ENSG00000116721	5462	PRAMEF12	ENSG00000116726	2209	None	None
HML2_1p36.21b	HERV	HML2	prototype	chr1	13012447	13021988	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRAMEF28P	ENSG00000274178	7351	PRAMEF6	ENSG00000232423	64867	None	None
HERV3_1p36.21a	HERV	HERV3	oneside	chr1	13084708	13089947	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRAMEF25	ENSG00000229571	6824	PRAMEF34P	ENSG00000277862	5232	None	None
HERV3_1p36.21b	HERV	HERV3	oneside	chr1	13136842	13142081	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC245056.1	ENSG00000233336	4900	PRAMEF36P	ENSG00000229978	5227	None	None
HML2_1p36.21c	HERV	HML2	prototype	chr1	13206972	13216513	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRAMEF13	ENSG00000279169	5563	PRAMEF18	ENSG00000279804	6192	None	None
HML2_1p36.21d	HERV	HML2	prototype	chr1	13352736	13362257	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PRAMEF14	ENSG00000204481	5602	PRAMEF19	ENSG00000204480	6810	None	None
HERVIP10FH_1p36.21a	HERV	HERVIP10FH	oneside	chr1	13559651	13560780	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BRWD1P1	ENSG00000215909	3957	PDPN	ENSG00000162493	22685	None	None
HERVH_1p36.21	HERV	HERVH	prototype	chr1	13560841	13567494	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BRWD1P1	ENSG00000215909	5147	PDPN	ENSG00000162493	15971	None	None
HERVIP10FH_1p36.21b	HERV	HERVIP10FH	oneside	chr1	13567557	13573195	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BRWD1P1	ENSG00000215909	11863	PDPN	ENSG00000162493	10270	None	None
ERVLE_1p36.13a	HERV	ERVLE	internal	chr1	15982682	15983526	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZBTB17	ENSG00000116809	6550	AL355994.1	ENSG00000231353	4656	None	None
HML3_1p36.13a	HERV	HML3	prototype	chr1	16102814	16108812	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EPHA2	ENSG00000142627	15525	FAM131C	ENSG00000185519	29163	None	None
PRIMA41_1p36.13a	HERV	PRIMA41	internal	chr1	16529151	16531095	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01783	ENSG00000233421	2791	AL137802.1	ENSG00000224174	7355	None	None
ERVLE_1p36.13b	HERV	ERVLE	internal	chr1	16602708	16603314	-	noncoding	NBPF1	protein_coding	SENSE	ENSG00000219481	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_1p36.13b	HERV	PRIMA41	internal	chr1	16670469	16671381	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL021920.2	ENSG00000280114	9716	AL137798.2	ENSG00000282143	2945	None	None
PRIMA41_1p36.13c	HERV	PRIMA41	internal	chr1	16736083	16736995	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ESPNP	ENSG00000268869	15926	AL021920.3	ENSG00000282740	2943	None	None
PRIMA41_1p36.13d	HERV	PRIMA41	internal	chr1	16876821	16878758	+	noncoding	CROCC,BX284668.2	protein_coding,lncRNA	SENSE,SENSE	ENSG00000058453,ENSG00000228549	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_1p36.13	HERV	MER61	internal	chr1	17491933	17493205	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RCC2	ENSG00000179051	52256	ARHGEF10L	ENSG00000074964	46493	None	None
ERVLE_1p36.13c	HERV	ERVLE	internal	chr1	17757179	17758849	+	noncoding	ACTL8	protein_coding	SENSE	ENSG00000117148	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p36.13d	HERV	ERVLE	prototype	chr1	17941282	17944864	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357509.1	ENSG00000284653	70848	ACTL8	ENSG00000117148	114219	None	chr1:17942060-17942064
ERV316A3_1p36.13	HERV	ERV316A3	oneside	chr1	18843102	18846539	+	noncoding	TAS1R2	protein_coding	ANTISENSE	ENSG00000179002	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_1p36.13	HERV	HUERSP3	oneside	chr1	19294272	19296835	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL035413.1	ENSG00000270728	245	AKR7A3	ENSG00000162482	5502	chr1:19295997-19296251	None
HML3_1p36.13b	HERV	HML3	prototype	chr1	19541477	19547695	+	coding	MICOS10	protein_coding	SENSE	ENSG00000173436	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_1p36.13	HERV	HUERSP1	internal	chr1	19847836	19850962	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OTUD3	ENSG00000169914	31433	AL391883.1	ENSG00000235434	28334	None	None
HERVK14C_1p36.13	HERV	HERVK14C	internal	chr1	19927433	19932159	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL304P	ENSG00000242688	38810	PLA2G2E	ENSG00000188784	3816	None	None
ERVLE_1p36.13e	HERV	ERVLE	internal	chr1	19941747	19942317	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PLA2G2E	ENSG00000188784	18130	RN7SL304P	ENSG00000242688	28652	None	None
HML3_1p36.13c	HERV	HML3	prototype	chr1	19997411	20003727	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PLA2G2A	ENSG00000188257	16995	PLA2G5	ENSG00000127472	24452	None	None
LTR46_1p36.13	HERV	LTR46	prototype	chr1	20028127	20035516	-	noncoding	PLA2G5	protein_coding	ANTISENSE	ENSG00000127472	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr1:20033680-20033947	chr1:20028387-20028409,chr1:20028508-20028523,chr1:20029482-20029487
HERVH_1p36.13	HERV	HERVH	oneside	chr1	20041281	20045782	-	noncoding	PLA2G5	protein_coding	ANTISENSE	ENSG00000127472	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_1p36.13	HERV	MER4	oneside	chr1	20046813	20053194	+	noncoding	PLA2G5	protein_coding	SENSE	ENSG00000127472	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p36.13f	HERV	ERVLE	prototype	chr1	20094082	20097380	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PLA2G5	ENSG00000127472	2171	PLA2G2D	ENSG00000117215	14559	None	None
HERVE_1p36.12	HERV	HERVE	prototype	chr1	20154110	20160610	+	noncoding	Z98257.1	lncRNA	SENSE	ENSG00000227066	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:20154112-20154157,chr1:20154211-20154215
HUERSP1_1p36.12	HERV	HUERSP1	internal	chr1	20515729	20519665	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MUL1	ENSG00000090432	7578	RPS4XP4	ENSG00000215520	6324	None	None
ERVLB4_1p36.12a	HERV	ERVLB4	internal	chr1	21205115	21206755	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031005.2	ENSG00000287192	26951	ECE1	ENSG00000117298	10492	None	None
ERVLB4_1p36.12b	HERV	ERVLB4	internal	chr1	21207724	21213077	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031005.2	ENSG00000287192	29560	ECE1	ENSG00000117298	4170	None	None
MER41_1p36.12	HERV	MER41	prototype	chr1	21389817	21402446	+	coding	PPP1R11P1	processed_pseudogene	SENSE	ENSG00000236216	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr1:21397574-21397879	chr1:21391853-21391854
ERVLE_1p36.12	HERV	ERVLE	internal	chr1	21453383	21453988	+	noncoding	NBPF3	protein_coding	SENSE	ENSG00000142794	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PABLB_1p36.12	HERV	PABLB	internal	chr1	22944027	22944895	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EPHB2	ENSG00000133216	22527	LACTBL1	ENSG00000215906	8148	None	None
MER4_1p36.12a	HERV	MER4	oneside	chr1	22987775	22989766	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LACTBL1	ENSG00000215906	22437	TEX46	ENSG00000227868	21068	None	None
MER4_1p36.12b	HERV	MER4	internal	chr1	22989788	22997502	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LACTBL1	ENSG00000215906	24450	TEX46	ENSG00000227868	13332	None	None
HERVH_1p36.12	HERV	HERVH	prototype	chr1	22997505	23004403	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TEX46	ENSG00000227868	6431	LACTBL1	ENSG00000215906	32167	None	chr1:23004099-23004100
ERVLB4_1p36.11	HERV	ERVLB4	internal	chr1	24888544	24893132	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RUNX3	ENSG00000020633	6379	CLIC4	ENSG00000169504	44223	None	chr1:24888653-24888660
ERV316A3_1p36.11a	HERV	ERV316A3	internal	chr1	25121778	25123964	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121994.1	ENSG00000233419	1089	AL050344.1	ENSG00000233755	8658	None	None
ERV316A3_1p36.11b	HERV	ERV316A3	oneside	chr1	26145639	26147087	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM110D	ENSG00000197245	11992	PDIK1L	ENSG00000175087	20084	None	None
ERVLE_1p36.11a	HERV	ERVLE	internal	chr1	26148781	26150036	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM110D	ENSG00000197245	9043	PDIK1L	ENSG00000175087	23226	None	None
MER41_1p36.11	HERV	MER41	oneside	chr1	26630245	26636092	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-29P	ENSG00000252429	27813	AL627313.1	ENSG00000229247	4285	None	None
ERVLE_1p36.11b	HERV	ERVLE	internal	chr1	26811581	26816449	+	noncoding	RN7SL165P	misc_RNA	SENSE	ENSG00000241188	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p36.11c	HERV	ERVLE	internal	chr1	27070419	27074352	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TENT5B	ENSG00000158246	57569	SLC9A1	ENSG00000090020	24457	chr1:27074288-27074601	None
ERVLE_1p36.11d	HERV	ERVLE	internal	chr1	27087720	27095180	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TENT5B	ENSG00000158246	74870	SLC9A1	ENSG00000090020	3629	chr1:27087879-27088138	None
ERVLE_1p35.3a	HERV	ERVLE	internal	chr1	27672710	27674802	-	noncoding	AL445490.1	lncRNA	ANTISENSE	ENSG00000225886	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_1p35.3	HERV	MER41	oneside	chr1	27690156	27694283	-	noncoding	AL445490.1,RNU6-424P	lncRNA,snRNA	ANTISENSE,ANTISENSE	ENSG00000225886,ENSG00000207095	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p35.3b	HERV	ERVLE	internal	chr1	27697848	27698817	-	noncoding	AL445490.1	lncRNA	ANTISENSE	ENSG00000225886	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_1p35.3	HERV	HARLEQUIN	oneside	chr1	28586907	28589810	-	noncoding	TAF12	protein_coding	SENSE	ENSG00000120656	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_1p35.3a	HERV	HERVL	internal	chr1	28654009	28659822	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GMEB1	ENSG00000162419	8910	RNU11	ENSG00000274978	5276	None	None
ERVLE_1p35.3c	HERV	ERVLE	internal	chr1	29333293	29340974	+	noncoding	LINC01756	lncRNA	ANTISENSE	ENSG00000230523	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p35.3d	HERV	ERVLE	internal	chr1	29405644	29406960	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01756	ENSG00000230523	55530	AL671862.1	ENSG00000225011	81233	None	None
ERV316A3_1p35.3a	HERV	ERV316A3	internal	chr1	29473273	29474542	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL671862.1	ENSG00000225011	13651	LINC01756	ENSG00000230523	123159	None	None
HERVL40_1p35.3	HERV	HERVL40	oneside	chr1	29539105	29540316	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092265.1	ENSG00000228176	168535	AL671862.1	ENSG00000225011	42212	None	None
HERV4_1p35.3	HERV	HERV4	internal	chr1	29563476	29565515	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092265.1	ENSG00000228176	143336	AL671862.1	ENSG00000225011	66583	None	None
MER101_1p35.3	HERV	MER101	internal	chr1	29607043	29611011	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL671862.1	ENSG00000225011	110150	AC092265.1	ENSG00000228176	97840	None	None
ERV316A3_1p35.3b	HERV	ERV316A3	internal	chr1	29684136	29685259	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL671862.1	ENSG00000225011	187243	AC092265.1	ENSG00000228176	23592	None	None
HML3_1p35.3	HERV	HML3	oneside	chr1	29716607	29717792	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645944.2	ENSG00000284676	37383	AC092265.1	ENSG00000228176	7060	None	None
HERVL_1p35.3b	HERV	HERVL	prototype	chr1	29794201	29800046	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645944.2	ENSG00000284676	3604	AL645944.1	ENSG00000270927	104819	None	None
ERV316A3_1p35.2	HERV	ERV316A3	oneside	chr1	29950154	29954214	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645944.1	ENSG00000270927	44797	LINC01648	ENSG00000233399	59738	None	None
ERVLE_1p35.2a	HERV	ERVLE	internal	chr1	30061549	30063910	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01648	ENSG00000233399	23937	AL137076.1	ENSG00000233372	76353	None	None
MER101_1p35.2	HERV	MER101	oneside	chr1	30174802	30178548	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL021921.1	ENSG00000231251	47975	AL137076.1	ENSG00000233372	33195	None	None
ERVLE_1p35.2b	HERV	ERVLE	internal	chr1	30181315	30182428	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137076.1	ENSG00000233372	39708	AL021921.1	ENSG00000231251	44095	None	None
HERVH_1p35.2	HERV	HERVH	prototype	chr1	30203678	30209113	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL137076.1	ENSG00000233372	62071	AL021921.1	ENSG00000231251	17410	None	None
ERVLB4_1p35.2	HERV	ERVLB4	internal	chr1	30288580	30290268	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL021921.1	ENSG00000231251	61965	AL161638.2	ENSG00000236335	119292	None	None
ERVLE_1p35.2c	HERV	ERVLE	internal	chr1	30380702	30383477	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161638.2	ENSG00000236335	26083	AL021921.1	ENSG00000231251	154087	None	None
ERVLE_1p35.2d	HERV	ERVLE	internal	chr1	30473110	30475382	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161638.1	ENSG00000231949	52002	MATN1	ENSG00000162510	235895	None	None
ERVLE_1p35.2e	HERV	ERVLE	internal	chr1	30543476	30544343	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161638.1	ENSG00000231949	122368	MATN1	ENSG00000162510	166934	None	None
MER34B_1p35.2	HERV	MER34B	internal	chr1	30922070	30925887	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PUM1	ENSG00000134644	5619	RN7SL371P	ENSG00000266210	3335	None	None
HERVIP10F_1p35.2a	HERV	HERVIP10F	oneside	chr1	31453515	31457948	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC209007.1	ENSG00000215899	29641	SERINC2	ENSG00000168528	18835	None	None
HERVIP10F_1p35.2b	HERV	HERVIP10F	prototype	chr1	31457949	31467319	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SERINC2	ENSG00000168528	23269	AC209007.1	ENSG00000215899	20270	None	None
HERVIP10F_1p35.2c	HERV	HERVIP10F	oneside	chr1	31467354	31471933	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC209007.1	ENSG00000215899	15656	SERINC2	ENSG00000168528	32674	chr1:31471460-31471848	chr1:31471112-31471140,chr1:31471459-31471489
HERVL_1p35.2	HERV	HERVL	oneside	chr1	31517845	31518912	+	noncoding	LINC01226	lncRNA	SENSE	ENSG00000284543	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p35.2f	HERV	ERVLE	internal	chr1	31994776	31995333	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KHDRBS1	ENSG00000121774	18535	AL136115.3	ENSG00000284702	7742	None	None
ERVLE_1p35.1a	HERV	ERVLE	internal	chr1	32404945	32411940	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356986.1	ENSG00000270850	10039	GAPDHP20	ENSG00000224333	1830	None	None
HUERSP3B_1p35.1	HERV	HUERSP3B	oneside	chr1	32412918	32421941	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP20	ENSG00000224333	9803	AL356986.1	ENSG00000270850	38	None	None
ERVLE_1p35.1b	HERV	ERVLE	internal	chr1	32429861	32430430	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL122P	ENSG00000263529	27405	LRRC37A12P	ENSG00000229259	3072	None	None
HERVH_1p35.1	HERV	HERVH	prototype	chr1	32432337	32438038	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LRRC37A12P	ENSG00000229259	5548	RN7SL122P	ENSG00000263529	19797	None	None
HERVIP10FH_1p35.1	HERV	HERVIP10FH	prototype	chr1	32442304	32449911	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL122P	ENSG00000263529	7924	LRRC37A12P	ENSG00000229259	15515	None	None
HERVS71_1p35.1	HERV	HERVS71	oneside	chr1	32923851	32926914	-	noncoding	AL031602.2	lncRNA	ANTISENSE	ENSG00000287691	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p35.1c	HERV	ERVLE	internal	chr1	32928071	32931352	-	noncoding	AL031602.2	lncRNA	ANTISENSE	ENSG00000287691	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11_1p35.1	HERV	HERVK11	internal	chr1	33065126	33068370	+	noncoding	AK2	protein_coding	ANTISENSE	ENSG00000004455	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p35.1a	HERV	ERV316A3	prototype	chr1	33186883	33192763	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL662907.3	ENSG00000284721	2025	TRIM62	ENSG00000116525	4824	None	None
ERV316A3_1p35.1b	HERV	ERV316A3	internal	chr1	33581791	33583607	+	noncoding	CSMD2	protein_coding	ANTISENSE	ENSG00000121904	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1p35.1	HERV	ERVLB4	oneside	chr1	34050180	34052158	+	noncoding	CSMD2	protein_coding	ANTISENSE	ENSG00000121904	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p34.3a	HERV	ERVLE	internal	chr1	34464782	34466743	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC115286.1	ENSG00000270241	187490	AC099565.1	ENSG00000287703	173414	None	None
ERVLE_1p34.3b	HERV	ERVLE	internal	chr1	34601347	34602512	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099565.1	ENSG00000287703	37645	AC115286.1	ENSG00000270241	324055	None	None
HERVH_1p34.3a	HERV	HERVH	prototype	chr1	34631960	34636749	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099565.1	ENSG00000287703	3408	AC115286.1	ENSG00000270241	354668	None	None
HERVFH19_1p34.3	HERV	HERVFH19	internal	chr1	35075455	35076339	+	noncoding	ZMYM1	protein_coding	SENSE	ENSG00000197056	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_1p34.3b	HERV	MER4	insert*	chr1	35127220	35130565	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590434.2	ENSG00000284640	10950	EFCAB14P1	ENSG00000228348	4736	None	None
HERVH_1p34.3b	HERV	HERVH	oneside	chr1	35132025	35138025	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590434.2	ENSG00000284640	3490	EFCAB14P1	ENSG00000228348	9541	None	None
HARLEQUIN_1p34.3a	HERV	HARLEQUIN	internal	chr1	35138026	35141426	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590434.2	ENSG00000284640	89	EFCAB14P1	ENSG00000228348	15542	None	None
HERV3_1p34.3	HERV	HERV3	internal	chr1	35141915	35146564	-	coding	AL590434.2	lncRNA	SENSE	ENSG00000284640	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_1p34.3b	HERV	HARLEQUIN	oneside	chr1	35147038	35149819	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SFPQ	ENSG00000116560	26559	AL590434.2	ENSG00000284640	603	None	None
ERVLE_1p34.3c	HERV	ERVLE	internal	chr1	35295660	35297321	-	noncoding	ZMYM4	protein_coding	ANTISENSE	ENSG00000146463	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p34.3a	HERV	ERV316A3	internal	chr1	35648569	35650718	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSMB2	ENSG00000126067	7043	C1orf216	ENSG00000142686	63159	None	None
ERV316A3_1p34.3b	HERV	ERV316A3	oneside	chr1	35650750	35651744	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSMB2	ENSG00000126067	9224	C1orf216	ENSG00000142686	62133	None	None
HERVFH21_1p34.3	HERV	HERVFH21	prototype	chr1	36329861	36337342	+	noncoding	AL591845.1	lncRNA	SENSE	ENSG00000286379	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:36330142-36330152,chr1:36330157-36330166
HML2_1p34.3	HERV	HML2	oneside	chr1	36488984	36491127	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FTLP18	ENSG00000230214	139208	CSF3R	ENSG00000119535	5706	None	None
HERVL_1p34.3a	HERV	HERVL	prototype	chr1	37365035	37371640	+	noncoding	LINC01137	lncRNA	ANTISENSE	ENSG00000233621	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_1p34.3	HERV	MER101	internal	chr1	37526164	37528920	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MEAF6	ENSG00000163875	11390	SNIP1	ENSG00000163877	5529	None	None
MER41_1p34.3	HERV	MER41	prototype	chr1	37903067	37907814	+	noncoding	INPP5B	protein_coding	ANTISENSE	ENSG00000204084	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1p34.3c	HERV	HERVH	prototype	chr1	37907815	37914173	+	noncoding	INPP5B	protein_coding	ANTISENSE	ENSG00000204084	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1p34.3b	HERV	HERVL	prototype	chr1	38144395	38150922	+	noncoding	AL390839.1	lncRNA	SENSE	ENSG00000286552	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p34.3c	HERV	ERV316A3	internal	chr1	38155702	38159588	+	noncoding	AL390839.1	lncRNA	SENSE	ENSG00000286552	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1p34.3d	HERV	HERVH	prototype	chr1	38425114	38430779	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-753P	ENSG00000200796	28349	LINC01685	ENSG00000238063	44046	None	None
MER4_1p34.3a	HERV	MER4	oneside	chr1	39070989	39075809	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MACF1	ENSG00000127603	5507	NDUFS5	ENSG00000168653	36353	None	None
ERVLE_1p34.2a	HERV	ERVLE	internal	chr1	40288340	40289668	-	noncoding	ZMPSTE24	protein_coding	ANTISENSE	ENSG00000084073	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1p34.2a	HERV	ERVLB4	internal	chr1	40433079	40436076	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SMAP2	ENSG00000084070	9753	AL031985.4	ENSG00000284677	123	None	None
ERVLE_1p34.2b	HERV	ERVLE	internal	chr1	40841383	40843705	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CITED4	ENSG00000179862	17349	KCNQ4	ENSG00000117013	931	None	None
ERVL_1p34.2	HERV	ERVL	oneside	chr1	41174282	41175563	+	noncoding	SCMH1	protein_coding	ANTISENSE	ENSG00000010803	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p34.2c	HERV	ERVLE	internal	chr1	41436846	41441007	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FOXO6	ENSG00000204060	53256	RNA5SP45	ENSG00000252563	25930	None	None
HERVW_1p34.2	HERV	HERVW	oneside	chr1	41944456	41950309	+	noncoding	HIVEP3	protein_coding	ANTISENSE	ENSG00000127124	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p34.2a	HERV	ERV316A3	oneside	chr1	41958113	41960712	+	noncoding	HIVEP3	protein_coding	ANTISENSE	ENSG00000127124	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p34.2d	HERV	ERVLE	internal	chr1	42044766	42045351	-	noncoding	AL158216.1	lncRNA	ANTISENSE	ENSG00000287587	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_1p34.2a	HERV	HUERSP3B	oneside	chr1	42503189	42509107	-	noncoding	CCDC30	protein_coding	ANTISENSE	ENSG00000186409	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_1p34.2b	HERV	HUERSP3B	oneside	chr1	42509517	42513732	-	noncoding	CCDC30	protein_coding	ANTISENSE	ENSG00000186409	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p34.2e	HERV	ERVLE	internal	chr1	42593987	42595931	-	noncoding	CCDC30	protein_coding	ANTISENSE	ENSG00000186409	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p34.2f	HERV	ERVLE	internal	chr1	42604350	42605878	-	noncoding	CCDC30	protein_coding	ANTISENSE	ENSG00000186409	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p34.2g	HERV	ERVLE	internal	chr1	42609550	42610212	-	noncoding	CCDC30	protein_coding	ANTISENSE	ENSG00000186409	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_1p34.2a	HERV	HERVH	prototype	chr1	42856712	42859884	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF691	ENSG00000164011	4235	AL512353.2	ENSG00000233708	26713	None	None
HERVL_1p34.2	HERV	HERVL	oneside	chr1	42866266	42870243	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF691	ENSG00000164011	13789	AL512353.2	ENSG00000233708	16354	None	None
ERVLB4_1p34.2b	HERV	ERVLB4	prototype	chr1	42904887	42912582	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC2A1	ENSG00000117394	12793	ATP6V1E1P1	ENSG00000225099	975	chr1:42904813-42905007	None
ERV316A3_1p34.2b	HERV	ERV316A3	prototype	chr1	43042735	43046910	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161637.2	ENSG00000283136	19098	AL161637.1	ENSG00000277513	57176	None	None
ERVLE_1p34.2h	HERV	ERVLE	internal	chr1	43074451	43077244	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161637.1	ENSG00000277513	26842	AL161637.2	ENSG00000283136	50814	None	None
MER101_1p34.2	HERV	MER101	internal	chr1	43083854	43085014	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161637.1	ENSG00000277513	19072	AL161637.2	ENSG00000283136	60217	None	None
HERVH_1p34.2b	HERV	HERVH	prototype	chr1	43085534	43091157	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161637.2	ENSG00000283136	61897	AL161637.1	ENSG00000277513	12929	None	None
ERVLE_1p34.2i	HERV	ERVLE	internal	chr1	43467473	43469790	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTPRF	ENSG00000142949	55397	HYI-AS1	ENSG00000229348	10478	None	None
ERVLB4_1p34.2c	HERV	ERVLB4	internal	chr1	43469877	43472738	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTPRF	ENSG00000142949	52449	HYI-AS1	ENSG00000229348	12882	chr1:43472476-43472804	None
MER4_1p34.1a	HERV	MER4	prototype	chr1	44173127	44181125	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL035417.2	ENSG00000271329	6818	AL035417.1	ENSG00000227994	408	None	None
MER101_1p34.1	HERV	MER101	oneside	chr1	44182783	44186173	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL035417.2	ENSG00000271329	1770	AL035417.1	ENSG00000227994	10064	None	None
ERV316A3_1p34.1a	HERV	ERV316A3	oneside	chr1	44370793	44374424	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ERI3	ENSG00000117419	15533	RNU6-369P	ENSG00000199385	16298	None	None
MER41_1p34.1a	HERV	MER41	internal	chr1	44888116	44889253	+	noncoding	EIF2B3	protein_coding	ANTISENSE	ENSG00000070785	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_1p34.1b	HERV	MER41	internal	chr1	44889829	44890622	+	noncoding	EIF2B3	protein_coding	ANTISENSE	ENSG00000070785	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p34.1b	HERV	ERV316A3	prototype	chr1	45212384	45217042	-	noncoding	ZSWIM5	protein_coding	SENSE	ENSG00000162415	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p34.1a	HERV	ERVLE	internal	chr1	45226689	45229003	-	noncoding	ZSWIM5	protein_coding	SENSE	ENSG00000162415	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p34.1b	HERV	ERVLE	internal	chr1	45246256	45250095	+	noncoding	ZSWIM5	protein_coding	ANTISENSE	ENSG00000162415	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_1p34.1c	HERV	MER4	opposite*	chr1	45305213	45315797	+	noncoding	ZSWIM5,LINC01144	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000162415,ENSG00000281912	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_1p34.1	HERV	HERVH	oneside	chr1	45315974	45320483	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZSWIM5	ENSG00000162415	9765	HPDL	ENSG00000186603	6412	None	chr1:45316236-45316249,chr1:45316257-45316267,chr1:45316301-45316308,chr1:45316329-45316337,chr1:45316347-45316356,chr1:45316869-45316872,chr1:45316279-45316286
MER4_1p34.1b	HERV	MER4	internal	chr1	45320709	45321542	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HPDL	ENSG00000186603	5353	ZSWIM5	ENSG00000162415	14500	chr1:45321395-45321562	None
MER61_1p34.1a	HERV	MER61	oneside	chr1	45573148	45575575	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355480.3	ENSG00000281133	5317	AKR1A1	ENSG00000117448	3099	None	None
MER61_1p34.1b	HERV	MER61	internal	chr1	45575881	45580362	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355480.3	ENSG00000281133	530	AKR1A1	ENSG00000117448	5832	None	None
ERVLB4_1p34.1	HERV	ERVLB4	oneside	chr1	46073148	46076202	-	noncoding	PIK3R3,AL358075.4	protein_coding,protein_coding	SENSE,SENSE	ENSG00000117461,ENSG00000278139	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_1p33	HERV	HARLEQUIN	prototype	chr1	46325548	46332557	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NSUN4	ENSG00000117481	7620	UQCRH	ENSG00000173660	8772	chr1:46328135-46328223	chr1:46331911-46331942
HERVIP10FH_1p33a	HERV	HERVIP10FH	oneside	chr1	46383762	46385780	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAAH	ENSG00000117480	8537	AL122001.1	ENSG00000225779	12807	None	None
HERVW_1p33a	HERV	HERVW	prototype	chr1	46385782	46391326	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAAH	ENSG00000117480	2991	AL122001.1	ENSG00000225779	14827	None	None
HERVIP10FH_1p33b	HERV	HERVIP10FH	oneside	chr1	46391343	46393974	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAAH	ENSG00000117480	343	AL122001.1	ENSG00000225779	20388	chr1:46393640-46393819	None
MER4_1p33a	HERV	MER4	oneside	chr1	46771192	46774760	+	noncoding	CYP4B1	protein_coding	SENSE	ENSG00000142973	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_1p33b	HERV	MER4	internal	chr1	46774779	46775748	-	noncoding	CYP4B1	protein_coding	ANTISENSE	ENSG00000142973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_1p33c	HERV	MER4	internal	chr1	46784143	46785370	-	noncoding	CYP4B1	protein_coding	ANTISENSE	ENSG00000142973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_1p33d	HERV	MER4	oneside	chr1	46785598	46788568	-	noncoding	CYP4B1	protein_coding	ANTISENSE	ENSG00000142973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_1p33a	HERV	HUERSP3B	internal	chr1	46874045	46877756	+	noncoding	CYP4Z2P	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000154198	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11_1p33	HERV	HERVK11	prototype	chr1	46900689	46908072	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYP4Z2P	ENSG00000154198	252	CYP4A11	ENSG00000187048	21105	None	None
HERVW_1p33b	HERV	HERVW	internal	chr1	46946602	46948076	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYP4A11	ENSG00000187048	5118	CYP4A26P	ENSG00000259832	19603	None	None
HERVW_1p33c	HERV	HERVW	prototype	chr1	46951891	46958907	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYP4A11	ENSG00000187048	10407	CYP4A26P	ENSG00000259832	8772	None	None
HUERSP3B_1p33b	HERV	HUERSP3B	internal	chr1	47090170	47093881	-	noncoding	CYP4Z1	protein_coding	ANTISENSE	ENSG00000186160	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_1p33d	HERV	HERVW	internal	chr1	47129814	47131292	-	noncoding	CYP4A22-AS1	lncRNA	SENSE	ENSG00000225506	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1p33	HERV	ERVLB4	oneside	chr1	47807138	47808402	+	noncoding	TRABD2B	protein_coding	ANTISENSE	ENSG00000269113	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p33a	HERV	ERVLE	internal	chr1	48129284	48130752	-	noncoding	SKINT1L	transcribed_unprocessed_pseudogene	SENSE	ENSG00000242267	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_1p33	HERV	HERVFRD	prototype	chr1	48186349	48191622	-	noncoding	AL109659.1	lncRNA	ANTISENSE	ENSG00000223720	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1p33	HERV	HERVH	prototype	chr1	48209002	48214821	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC5A9	ENSG00000117834	7864	AL109659.1	ENSG00000223720	2145	None	None
HML3_1p33	HERV	HML3	prototype	chr1	48513245	48520256	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AGBL4	ENSG00000186094	12598	AL356968.1	ENSG00000232514	15509	None	None
ERVLE_1p33b	HERV	ERVLE	internal	chr1	48974627	48978216	+	noncoding	AGBL4	protein_coding	ANTISENSE	ENSG00000186094	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_1p33	HERV	MER41	prototype	chr1	49340672	49347240	+	noncoding	AGBL4	protein_coding	ANTISENSE	ENSG00000186094	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1p33a	HERV	HERVL	oneside	chr1	49439505	49442076	+	noncoding	AGBL4,AGBL4-IT1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000186094,ENSG00000225623	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1p33b	HERV	HERVL	prototype	chr1	49572733	49579287	+	noncoding	AGBL4	protein_coding	ANTISENSE	ENSG00000186094	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p33	HERV	ERV316A3	oneside	chr1	49626047	49632050	-	noncoding	AGBL4	protein_coding	SENSE	ENSG00000186094	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_1p33e	HERV	MER4	oneside	chr1	49870933	49873834	+	noncoding	AGBL4	protein_coding	ANTISENSE	ENSG00000186094	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1p33c	HERV	HERVL	prototype	chr1	50165834	50169387	-	noncoding	ELAVL4	protein_coding	ANTISENSE	ENSG00000162374	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p32.3a	HERV	ERVLE	internal	chr1	50792486	50796194	+	noncoding	FAF1	protein_coding	ANTISENSE	ENSG00000185104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_1p32.3	HERV	HERVL40	prototype	chr1	50942586	50947014	-	noncoding	FAF1	protein_coding	SENSE	ENSG00000185104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p32.3b	HERV	ERVLE	internal	chr1	51165011	51169107	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01562	ENSG00000203356	25988	CFL1P2	ENSG00000213478	6540	None	None
HERVW_1p32.3a	HERV	HERVW	oneside	chr1	51226975	51230497	+	noncoding	LINC01562	lncRNA	ANTISENSE	ENSG00000203356	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p32.3a	HERV	ERV316A3	prototype	chr1	52152823	52159748	-	noncoding	ZFYVE9	protein_coding	ANTISENSE	ENSG00000157077	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_1p32.3	HERV	MER41	internal	chr1	52832683	52834593	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZYG11A	ENSG00000203995	7918	ZYG11B	ENSG00000162378	5347	None	None
HERVH_1p32.3a	HERV	HERVH	prototype	chr1	53424337	53430029	+	noncoding	SLC25A3P1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000236253	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:53424662-53424677
HERVH_1p32.3b	HERV	HERVH	prototype	chr1	53432880	53435177	+	noncoding	SLC25A3P1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000236253	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:53432943-53432965,chr1:53432972-53432979,chr1:53433025-53433034,chr1:53433045-53433051
ERVLE_1p32.3c	HERV	ERVLE	internal	chr1	53477198	53481817	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GLIS1	ENSG00000174332	24420	DMRTB1	ENSG00000143006	9710	None	None
ERV316A3_1p32.3b	HERV	ERV316A3	oneside	chr1	54101969	54105569	+	noncoding	TCEANC2	protein_coding	SENSE	ENSG00000116205	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HML3_1p32.3	HERV	HML3	prototype	chr1	54630287	54636120	+	noncoding	ACOT11	protein_coding	SENSE	ENSG00000162390	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVH_1p32.3c	HERV	HERVH	prototype	chr1	54897904	54903584	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590440.2	ENSG00000284601	71316	DHCR24-DT	ENSG00000233203	9054	None	None
HERVH_1p32.3d	HERV	HERVH	oneside	chr1	54906872	54910857	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590440.2	ENSG00000284601	64043	DHCR24-DT	ENSG00000233203	18022	None	None
HERVW_1p32.3b	HERV	HERVW	prototype	chr1	54911009	54919525	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590440.2	ENSG00000284601	55375	DHCR24-DT	ENSG00000233203	22159	None	None
PRIMAX_1p32.3	HERV	PRIMAX	internal	chr1	54932383	54935270	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590440.2	ENSG00000284601	39630	DHCR24-DT	ENSG00000233203	43533	chr1:54935125-54935230	None
HERVH_1p32.3e	HERV	HERVH	prototype	chr1	55022708	55028369	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BSND	ENSG00000162399	5536	PCSK9	ENSG00000169174	11078	None	None
ERVLE_1p32.3d	HERV	ERVLE	internal	chr1	55407838	55411559	+	noncoding	AL603840.1	lncRNA	SENSE	ENSG00000234810	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p32.3e	HERV	ERVLE	internal	chr1	55437108	55437672	+	noncoding	AL603840.1	lncRNA	SENSE	ENSG00000234810	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p32.3f	HERV	ERVLE	internal	chr1	55471412	55472626	-	noncoding	AL603840.1	lncRNA	ANTISENSE	ENSG00000234810	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p32.3g	HERV	ERVLE	internal	chr1	55497908	55499942	-	noncoding	AL603840.1	lncRNA	ANTISENSE	ENSG00000234810	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1p32.2a	HERV	HERVL	oneside	chr1	55729046	55734929	+	coding	AL603840.1	lncRNA	SENSE	ENSG00000234810	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVL_1p32.2a	HERV	ERVL	oneside	chr1	55779089	55783183	-	noncoding	AL603840.1	lncRNA	ANTISENSE	ENSG00000234810	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_1p32.2	HERV	HERVW	prototype	chr1	55783184	55788968	-	noncoding	AL603840.1	lncRNA	ANTISENSE	ENSG00000234810	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_1p32.2b	HERV	ERVL	oneside	chr1	55788969	55791432	-	noncoding	AL603840.1	lncRNA	ANTISENSE	ENSG00000234810	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p32.2a	HERV	ERV316A3	internal	chr1	55812852	55814649	-	noncoding	AL603840.1	lncRNA	ANTISENSE	ENSG00000234810	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p32.2a	HERV	ERVLE	internal	chr1	55829055	55829916	-	noncoding	AL603840.1	lncRNA	ANTISENSE	ENSG00000234810	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p32.2b	HERV	ERV316A3	internal	chr1	55842855	55844924	-	noncoding	AL603840.1	lncRNA	ANTISENSE	ENSG00000234810	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p32.2c	HERV	ERV316A3	internal	chr1	55888184	55889591	-	noncoding	AL603840.1,LINC01755	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000234810,ENSG00000233079	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p32.2b	HERV	ERVLE	internal	chr1	56083511	56084398	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL603840.1	ENSG00000234810	12998	AL353681.1	ENSG00000235612	61323	None	None
ERV316A3_1p32.2d	HERV	ERV316A3	internal	chr1	56608052	56608727	+	noncoding	PLPP3	protein_coding	ANTISENSE	ENSG00000162407	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1p32.2b	HERV	HERVL	oneside	chr1	57557024	57563307	+	noncoding	DAB1	protein_coding	ANTISENSE	ENSG00000173406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_1p32.2	HERV	HERV9	prototype	chr1	58167160	58175478	+	noncoding	DAB1	protein_coding	ANTISENSE	ENSG00000173406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p32.2c	HERV	ERVLE	internal	chr1	58364583	58365289	-	noncoding	DAB1	protein_coding	SENSE	ENSG00000173406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p32.2e	HERV	ERV316A3	oneside	chr1	58365304	58366814	+	noncoding	DAB1	protein_coding	ANTISENSE	ENSG00000173406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p32.2f	HERV	ERV316A3	oneside	chr1	58367294	58369323	+	noncoding	DAB1	protein_coding	ANTISENSE	ENSG00000173406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p32.1a	HERV	ERV316A3	oneside	chr1	58547607	58551064	-	noncoding	AL035411.3	lncRNA	ANTISENSE	ENSG00000286918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p32.1b	HERV	ERV316A3	prototype	chr1	59227368	59231293	-	noncoding	LINC01358,AC093425.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000237352,ENSG00000224609	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p32.1	HERV	ERVLE	internal	chr1	60126787	60127946	+	noncoding	LINC02778	lncRNA	SENSE	ENSG00000238242	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1p32.1	HERV	ERVLB4	prototype	chr1	60177052	60179474	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01748	ENSG00000226476	336242	LINC02778	ENSG00000238242	27268	None	None
HERVL_1p32.1	HERV	HERVL	oneside	chr1	60246749	60249620	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02778	ENSG00000238242	96965	LINC01748	ENSG00000226476	266096	None	None
ERV316A3_1p32.1c	HERV	ERV316A3	oneside	chr1	60534356	60536130	+	noncoding	LINC01748	lncRNA	ANTISENSE	ENSG00000226476	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p31.3a	HERV	ERVLE	internal	chr1	60838875	60839451	+	noncoding	AC099792.1	lncRNA	ANTISENSE	ENSG00000231252	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p31.3b	HERV	ERVLE	internal	chr1	61491454	61493071	-	noncoding	AC099791.3	lncRNA	ANTISENSE	ENSG00000284808	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1p31.3a	HERV	HERVL	internal	chr1	61532357	61533664	-	noncoding	AC099791.3	lncRNA	ANTISENSE	ENSG00000284808	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p31.3c	HERV	ERVLE	internal	chr1	61624862	61627276	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099791.4	ENSG00000287224	34958	AC099791.1	ENSG00000223920	26918	None	None
ERVLE_1p31.3d	HERV	ERVLE	internal	chr1	61632364	61634362	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099791.4	ENSG00000287224	42460	AC099791.1	ENSG00000223920	19832	None	None
HML1_1p31.3	HERV	HML1	prototype	chr1	62178464	62183789	-	noncoding	PATJ	protein_coding	ANTISENSE	ENSG00000132849	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr1:62178587-62178591
ERV316A3_1p31.3a	HERV	ERV316A3	oneside	chr1	62427667	62431892	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	USP1	ENSG00000162607	4405	KANK4	ENSG00000132854	108233	None	None
HERVH_1p31.3a	HERV	HERVH	oneside	chr1	63572744	63574886	-	noncoding	ITGB3BP	protein_coding	SENSE	ENSG00000142856	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p31.3b	HERV	ERV316A3	oneside	chr1	63705544	63707137	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGM1	ENSG00000079739	45299	ROR1	ENSG00000185483	66880	None	None
ERV316A3_1p31.3c	HERV	ERV316A3	oneside	chr1	63707156	63708437	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGM1	ENSG00000079739	46911	ROR1	ENSG00000185483	65580	None	None
ERV316A3_1p31.3d	HERV	ERV316A3	internal	chr1	63764735	63765414	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ROR1	ENSG00000185483	8603	PGM1	ENSG00000079739	104490	None	None
HERVL18_1p31.3a	HERV	HERVL18	prototype	chr1	64186607	64192762	+	coding	AL445205.1	lncRNA	SENSE	ENSG00000284928	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_1p31.3b	HERV	HERVH	prototype	chr1	64349943	64355761	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-62P	ENSG00000238653	28637	UBE2U	ENSG00000177414	82575	None	None
ERV316A3_1p31.3e	HERV	ERV316A3	prototype	chr1	64729146	64734751	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAVER2	ENSG00000162437	10344	CACHD1	ENSG00000158966	36088	None	None
ERV316A3_1p31.3f	HERV	ERV316A3	oneside	chr1	64974575	64976920	-	noncoding	JAK1,LINC01359	protein_coding,lncRNA	SENSE,SENSE	ENSG00000162434,ENSG00000226891	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_1p31.3c	HERV	HERVH	prototype	chr1	65643207	65648034	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL513493.1	ENSG00000285079	55928	LEPR	ENSG00000116678	1648	None	None
ERVLE_1p31.3e	HERV	ERVLE	internal	chr1	65693577	65694841	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LEPR	ENSG00000116678	52018	AL513493.1	ENSG00000285079	9121	None	None
HERVL_1p31.3b	HERV	HERVL	oneside	chr1	65927540	65930375	-	coding	PDE4B	protein_coding	ANTISENSE	ENSG00000184588	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p31.3g	HERV	ERV316A3	internal	chr1	65945013	65946329	-	noncoding	PDE4B	protein_coding	ANTISENSE	ENSG00000184588	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p31.3h	HERV	ERV316A3	oneside	chr1	65946472	65950867	-	noncoding	PDE4B	protein_coding	ANTISENSE	ENSG00000184588	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_1p31.3b	HERV	HERVL18	unknown	chr1	66381794	66383692	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PDE4B	ENSG00000184588	7215	SGIP1	ENSG00000118473	149691	None	None
HERV9_1p31.3	HERV	HERV9	oneside	chr1	66416987	66426369	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SGIP1	ENSG00000118473	107014	PDE4B	ENSG00000184588	42408	chr1:66420966-66421227	chr1:66417174-66417179
ERVLE_1p31.3f	HERV	ERVLE	internal	chr1	66521316	66524803	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PDE4B	ENSG00000184588	146737	SGIP1	ENSG00000118473	8580	None	None
ERVLB4_1p31.3	HERV	ERVLB4	internal	chr1	66840709	66841817	-	noncoding	WDR78	protein_coding	SENSE	ENSG00000152763	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_1p31.3	HERV	MER4	prototype	chr1	66912485	66919266	+	coding	WDR78	protein_coding	ANTISENSE	ENSG00000152763	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p31.3g	HERV	ERVLE	internal	chr1	67059766	67062974	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C1orf141	ENSG00000203963	29191	SLC35D1	ENSG00000116704	5618	None	None
HERVL_1p31.3c	HERV	HERVL	oneside	chr1	67288388	67292750	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL389925.1	ENSG00000228523	9609	IL12RB2	ENSG00000081985	14614	None	None
MER4B_1p31.3	HERV	MER4B	internal	chr1	67516690	67520753	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERBP1	ENSG00000142864	86275	LINC01702	ENSG00000235200	1546	None	None
MER101_1p31.3	HERV	MER101	internal	chr1	68054877	68056307	+	noncoding	GNG12-AS1	lncRNA	SENSE	ENSG00000232284	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p31.3i	HERV	ERV316A3	oneside	chr1	68309163	68312885	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP18	ENSG00000237622	62442	COX6B1P7	ENSG00000225242	26541	None	None
HERVH_1p31.3d	HERV	HERVH	prototype	chr1	68386004	68391992	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL139413.1	ENSG00000229440	4347	RPE65	ENSG00000116745	36830	None	chr1:68391108-68391135
MER4_1p31.2	HERV	MER4	oneside	chr1	68507762	68513195	-	noncoding	DEPDC1-AS1	lncRNA	ANTISENSE	ENSG00000234264	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1p31.2	HERV	HERVL	internal	chr1	68809807	68810804	-	noncoding	AL033530.1	lncRNA	ANTISENSE	ENSG00000285407	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_1p31.2	HERV	HUERSP2	prototype	chr1	68859650	68863453	-	noncoding	AL033530.1	lncRNA	ANTISENSE	ENSG00000285407	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p31.2	HERV	ERV316A3	internal	chr1	68892430	68893458	+	noncoding	AL033530.1	lncRNA	SENSE	ENSG00000285407	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p31.1a	HERV	ERVLE	internal	chr1	69440471	69442508	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359894.1	ENSG00000287453	109340	LINC01758	ENSG00000229639	5062	None	None
ERVLE_1p31.1b	HERV	ERVLE	internal	chr1	69442573	69444469	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359894.1	ENSG00000287453	107379	LINC01758	ENSG00000229639	7164	None	None
MER101_1p31.1a	HERV	MER101	oneside	chr1	69527178	69530904	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359894.1	ENSG00000287453	20944	LINC01758	ENSG00000229639	91769	None	None
HERVH_1p31.1a	HERV	HERVH	prototype	chr1	70367629	70374024	+	noncoding	HHLA3	protein_coding	SENSE	ENSG00000197568	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr1:70367952-70367957
HERVL_1p31.1a	HERV	HERVL	oneside	chr1	70559186	70562044	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CASP3P1	ENSG00000237033	98613	AL354872.1	ENSG00000233020	27694	None	None
HERVH_1p31.1b	HERV	HERVH	prototype	chr1	70588437	70593991	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL354872.1	ENSG00000233020	56945	CASP3P1	ENSG00000237033	66666	None	None
HERVL18_1p31.1a	HERV	HERVL18	prototype	chr1	70627958	70631285	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL354872.1	ENSG00000233020	96466	CASP3P1	ENSG00000237033	29372	None	None
PABLA_1p31.1	HERV	PABLA	internal	chr1	70921278	70924729	+	noncoding	PTGER3	protein_coding	ANTISENSE	ENSG00000050628	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_1p31.1a	HERV	HERVFRD	prototype	chr1	71336142	71343218	-	noncoding	ZRANB2-AS2	lncRNA	ANTISENSE	ENSG00000229956	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_1p31.1a	HERV	HERVP71A	prototype	chr1	71502068	71510867	+	noncoding	NEGR1	protein_coding	ANTISENSE	ENSG00000172260	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p31.1a	HERV	ERV316A3	internal	chr1	71818991	71823069	+	noncoding	NEGR1,NEGR1-IT1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000172260,ENSG00000228853	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1p31.1b	HERV	HERVL	prototype	chr1	72312365	72319126	-	noncoding	AL513166.1	lncRNA	ANTISENSE	ENSG00000286863	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p31.1c	HERV	ERVLE	internal	chr1	72433538	72435738	+	noncoding	AL513166.1	lncRNA	SENSE	ENSG00000286863	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL32_1p31.1a	HERV	HERVL32	oneside	chr1	72536817	72540097	-	noncoding	AL513166.1	lncRNA	ANTISENSE	ENSG00000286863	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL32_1p31.1b	HERV	HERVL32	oneside	chr1	72540629	72543692	-	noncoding	AL513166.1	lncRNA	ANTISENSE	ENSG00000286863	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_1p31.1b	HERV	HERVFRD	prototype	chr1	72688490	72694815	-	noncoding	AL513166.1,AL583808.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000286863,ENSG00000225087	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_1p31.1a	HERV	HERVL40	oneside	chr1	72767328	72771894	+	noncoding	AL583808.1,LINC02796	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000225087,ENSG00000227016	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_1p31.1	HERV	MER41	internal	chr1	72811822	72812848	-	noncoding	AL583808.1,LINC02797	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000225087,ENSG00000285808	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1p31.1a	HERV	ERVLB4	prototype	chr1	72854178	72855507	-	noncoding	AL583808.1,LINC02797	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000225087,ENSG00000285808	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_1p31.1c	HERV	HERVL	oneside	chr1	72877408	72878678	+	noncoding	AL583808.1	lncRNA	ANTISENSE	ENSG00000225087	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1p31.1c	HERV	HERVH	prototype	chr1	72980446	72985490	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P21	ENSG00000229636	119302	AL732618.1	ENSG00000280317	1132	None	None
HERVH_1p31.1d	HERV	HERVH	prototype	chr1	72987801	72993602	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P21	ENSG00000229636	111190	AL732618.1	ENSG00000280317	8487	None	None
ERVLE_1p31.1d	HERV	ERVLE	oneside	chr1	73115957	73118649	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P21	ENSG00000229636	9675	RN7SKP19	ENSG00000251825	72955	None	None
ERVLB4_1p31.1b	HERV	ERVLB4	oneside	chr1	73119379	73122614	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P21	ENSG00000229636	13097	RN7SKP19	ENSG00000251825	68990	None	None
ERVLE_1p31.1e	HERV	ERVLE	internal	chr1	73170807	73172644	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP19	ENSG00000251825	18960	KRT8P21	ENSG00000229636	64525	None	None
ERVLE_1p31.1f	HERV	ERVLE	internal	chr1	73172777	73173471	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP19	ENSG00000251825	18133	KRT8P21	ENSG00000229636	66495	None	None
MER101_1p31.1b	HERV	MER101	internal	chr1	73340002	73345431	-	noncoding	LINC01360	lncRNA	ANTISENSE	ENSG00000233973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_1p31.1c	HERV	MER101	internal	chr1	73345442	73346122	-	noncoding	LINC01360	lncRNA	ANTISENSE	ENSG00000233973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_1p31.1b	HERV	HERVL40	internal	chr1	73698733	73700492	-	noncoding	LINC02238	lncRNA	ANTISENSE	ENSG00000223479	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVL_1p31.1	HERV	ERVL	oneside	chr1	73719202	73725016	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02238	ENSG00000223479	3988	RNA5SP50	ENSG00000200601	24501	None	None
HERVP71A_1p31.1b	HERV	HERVP71A	oneside	chr1	74394411	74400944	+	noncoding	FPGT-TNNI3K,TNNI3K	protein_coding,protein_coding	SENSE,SENSE	ENSG00000259030,ENSG00000116783	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_1p31.1	HERV	HERV9	prototype	chr1	74740033	74745644	-	noncoding	TYW3	protein_coding	ANTISENSE	ENSG00000162623	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p31.1b	HERV	ERV316A3	oneside	chr1	74804194	74805454	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC133865.1	ENSG00000229943	157860	TYW3	ENSG00000162623	37516	None	None
ERVLE_1p31.1g	HERV	ERVLE	internal	chr1	75054109	75057604	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC133865.1	ENSG00000229943	88991	AC099786.3	ENSG00000261213	64914	None	None
ERVLE_1p31.1h	HERV	ERVLE	internal	chr1	75288595	75290184	+	noncoding	SLC44A5	protein_coding	ANTISENSE	ENSG00000137968	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_1p31.1	HERV	HML2	prototype	chr1	75377086	75383458	+	coding	SLC44A5	protein_coding	ANTISENSE	ENSG00000137968	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV4_1p31.1	HERV	HERV4	internal	chr1	75688749	75689585	+	noncoding	AL137803.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000230863	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_1p31.1a	HERV	MER4B	internal	chr1	75717681	75718483	+	noncoding	AL137803.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000230863	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1p31.1c	HERV	ERVLB4	prototype	chr1	75891930	75896433	+	noncoding	MSH4	protein_coding	SENSE	ENSG00000057468	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p31.1i	HERV	ERVLE	internal	chr1	76852898	76853540	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ST6GALNAC5	ENSG00000117069	13940	LINC02567	ENSG00000237552	73631	None	None
HERVL_1p31.1d	HERV	HERVL	prototype	chr1	76874387	76880817	-	coding	ST6GALNAC5	protein_coding	ANTISENSE	ENSG00000117069	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1p31.1e	HERV	HERVH	prototype	chr1	76894813	76900387	-	noncoding	ST6GALNAC5	protein_coding	ANTISENSE	ENSG00000117069	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1p31.1e	HERV	HERVL	prototype	chr1	77182232	77189846	+	coding	PIGK	protein_coding	ANTISENSE	ENSG00000142892	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_1p31.1a	HERV	MER34B	internal	chr1	77244045	77245768	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093433.2	ENSG00000287870	2865	PIGK	ENSG00000142892	24615	None	None
ERVLE_1p31.1j	HERV	ERVLE	internal	chr1	77706472	77708145	+	noncoding	USP33	protein_coding	ANTISENSE	ENSG00000077254	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVS71_1p31.1	HERV	HERVS71	prototype	chr1	78198910	78200628	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNFT1P2	ENSG00000233333	27673	AC096531.2	ENSG00000237413	28971	None	None
ERVLE_1p31.1k	HERV	ERVLE	internal	chr1	78324273	78326208	-	noncoding	AC096531.2,PTGFR	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000237413,ENSG00000122420	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1p31.1f	HERV	HERVH	prototype	chr1	78872187	78880915	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104837.1	ENSG00000235400	121528	ADGRL4	ENSG00000162618	8849	None	None
MER61_1p31.1a	HERV	MER61	prototype	chr1	78966119	78971684	+	noncoding	ADGRL4	protein_coding	ANTISENSE	ENSG00000162618	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1p31.1d	HERV	ERVLB4	internal	chr1	79143110	79143725	+	noncoding	ADGRL4	protein_coding	ANTISENSE	ENSG00000162618	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1p31.1g	HERV	HERVH	prototype	chr1	79488608	79494123	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADH5P2	ENSG00000232676	26957	LINC02792	ENSG00000285462	142163	None	chr1:79493808-79493816
ERVLB4_1p31.1e	HERV	ERVLB4	internal	chr1	79548566	79551834	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADH5P2	ENSG00000232676	26363	AC099671.1	ENSG00000285409	415899	None	None
MER34B_1p31.1b	HERV	MER34B	unknown	chr1	79606846	79610172	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADH5P2	ENSG00000232676	84643	AC099671.1	ENSG00000285409	357561	None	None
MER101_1p31.1d	HERV	MER101	internal	chr1	79607758	79608919	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADH5P2	ENSG00000232676	85555	AC099671.1	ENSG00000285409	358814	None	None
MER101_1p31.1e	HERV	MER101	internal	chr1	79609322	79610025	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADH5P2	ENSG00000232676	87119	AC099671.1	ENSG00000285409	357708	None	None
HERVH_1p31.1h	HERV	HERVH	prototype	chr1	79638762	79644487	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099671.1	ENSG00000285409	323246	ADH5P2	ENSG00000232676	116559	None	None
HERVH_1p31.1i	HERV	HERVH	prototype	chr1	79696342	79702062	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099671.1	ENSG00000285409	265671	ADH5P2	ENSG00000232676	174139	None	chr1:79701732-79701739
ERVLE_1p31.1l	HERV	ERVLE	internal	chr1	79818091	79819267	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADH5P2	ENSG00000232676	295888	AC099671.1	ENSG00000285409	148466	None	None
HERVL_1p31.1f	HERV	HERVL	prototype	chr1	79927925	79934188	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADH5P2	ENSG00000232676	405722	AC099671.1	ENSG00000285409	33545	None	None
HERVL18_1p31.1b	HERV	HERVL18	prototype	chr1	80050218	80054588	+	noncoding	AC099671.1	lncRNA	ANTISENSE	ENSG00000285409	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_1p31.1g	HERV	HERVL	prototype	chr1	80574449	80576362	-	noncoding	AL136234.1,LINC01781	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000224326,ENSG00000234184	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_1p31.1b	HERV	MER61	prototype	chr1	80633351	80638648	+	noncoding	LINC01781	lncRNA	SENSE	ENSG00000234184	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p31.1m	HERV	ERVLE	internal	chr1	80659443	80660880	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01781	ENSG00000234184	12652	MTND2P30	ENSG00000227937	419910	None	None
ERVLE_1p31.1n	HERV	ERVLE	internal	chr1	80727216	80730853	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTND2P30	ENSG00000227937	349937	LINC01781	ENSG00000234184	80425	None	None
ERVLE_1p31.1o	HERV	ERVLE	internal	chr1	80741424	80742920	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTND2P30	ENSG00000227937	337870	LINC01781	ENSG00000234184	94633	None	None
HERVH_1p31.1j	HERV	HERVH	prototype	chr1	81245283	81251207	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093154.1	ENSG00000285179	23207	RN7SKP247	ENSG00000223026	582	None	None
ERV316A3_1p31.1c	HERV	ERV316A3	prototype	chr1	81277800	81281566	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADGRL2	ENSG00000117114	24594	RN7SKP247	ENSG00000223026	25704	None	None
ERV316A3_1p31.1d	HERV	ERV316A3	prototype	chr1	81587983	81592738	-	noncoding	ADGRL2,AC117944.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000117114,ENSG00000236676	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_1p31.1k	HERV	HERVH	prototype	chr1	82067563	82072836	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL157944.1	ENSG00000233290	139577	ADGRL2	ENSG00000117114	75127	None	None
HERVH_1p31.1l	HERV	HERVH	prototype	chr1	82354569	82360556	-	noncoding	AL157944.1	lncRNA	SENSE	ENSG00000233290	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p31.1p	HERV	ERVLE	internal	chr1	82365040	82367912	-	noncoding	AL157944.1	lncRNA	SENSE	ENSG00000233290	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1p31.1f	HERV	ERVLB4	oneside	chr1	82452322	82454754	+	noncoding	AL157944.1	lncRNA	ANTISENSE	ENSG00000233290	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p31.1e	HERV	ERV316A3	oneside	chr1	82550256	82553802	-	noncoding	AL157944.1	lncRNA	SENSE	ENSG00000233290	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_1p31.1	HERV	LTR19	internal	chr1	82622974	82626992	+	noncoding	AL157944.1	lncRNA	ANTISENSE	ENSG00000233290	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p31.1f	HERV	ERV316A3	prototype	chr1	82937479	82941026	-	noncoding	LINC01362	lncRNA	ANTISENSE	ENSG00000230817	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1p31.1m	HERV	HERVH	prototype	chr1	82955311	82961594	+	noncoding	LINC01362	lncRNA	SENSE	ENSG00000230817	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_1p31.1c	HERV	HERVL40	oneside	chr1	83086361	83089383	+	noncoding	LINC01362	lncRNA	SENSE	ENSG00000230817	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p31.1q	HERV	ERVLE	internal	chr1	83420348	83421067	-	noncoding	AC116099.1	lncRNA	SENSE	ENSG00000285782	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_1p31.1	HERV	MER4	oneside	chr1	84020889	84023436	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104454.2	ENSG00000285201	15093	AC104454.1	ENSG00000229486	2518	None	None
ERVLB4_1p31.1g	HERV	ERVLB4	oneside	chr1	84027914	84034931	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104454.1	ENSG00000229486	9543	AC104454.2	ENSG00000285201	3598	None	None
ERVLE_1p31.1r	HERV	ERVLE	oneside	chr1	84038942	84043331	+	noncoding	AC104454.2	lncRNA	SENSE	ENSG00000285201	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p31.1s	HERV	ERVLE	internal	chr1	84050542	84052088	+	noncoding	AC104454.2	lncRNA	SENSE	ENSG00000285201	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_1p31.1b	HERV	MER4B	oneside	chr1	84069404	84072036	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359504.2	ENSG00000271576	4295	AC104454.2	ENSG00000285201	4373	None	None
MER101_1p31.1f	HERV	MER101	internal	chr1	84186630	84190130	-	noncoding	PRKACB	protein_coding	ANTISENSE	ENSG00000142875	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p31.1g	HERV	ERV316A3	internal	chr1	84357153	84361136	-	noncoding	SAMD13	protein_coding	ANTISENSE	ENSG00000203943	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p22.3a	HERV	ERVLE	internal	chr1	84536109	84539258	+	noncoding	AL359762.3,SPATA1	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000285851,ENSG00000122432	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_1p22.3	HERV	LTR25	internal	chr1	84603880	84611675	+	noncoding	AL359762.2	lncRNA	SENSE	ENSG00000285374	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p22.3b	HERV	ERVLE	internal	chr1	85218859	85219853	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SYDE2	ENSG00000097096	17843	C1orf52	ENSG00000162642	30100	None	None
MER34B_1p22.3a	HERV	MER34B	internal	chr1	85394502	85396752	+	noncoding	AL078459.1,DDAH1	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000223653,ENSG00000153904	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_1p22.3b	HERV	MER34B	internal	chr1	85397052	85397765	+	noncoding	AL078459.1,DDAH1	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000223653,ENSG00000153904	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p22.3c	HERV	ERVLE	internal	chr1	85806974	85813032	+	noncoding	COL24A1	protein_coding	ANTISENSE	ENSG00000171502	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1p22.3a	HERV	ERVLB4	oneside	chr1	85913180	85915546	+	noncoding	COL24A1	protein_coding	ANTISENSE	ENSG00000171502	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p22.3a	HERV	ERV316A3	prototype	chr1	85935919	85939056	+	noncoding	COL24A1	protein_coding	ANTISENSE	ENSG00000171502	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p22.3b	HERV	ERV316A3	internal	chr1	86002209	86005168	+	noncoding	COL24A1	protein_coding	ANTISENSE	ENSG00000171502	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1p22.3b	HERV	ERVLB4	oneside	chr1	86280523	86283198	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	COL24A1	ENSG00000171502	123580	LINC02795	ENSG00000285210	5506	chr1:86282817-86282888	None
HERVH48_1p22.3	HERV	HERVH48	oneside	chr1	86339370	86343589	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02795	ENSG00000285210	18659	ODF2L	ENSG00000122417	3235	chr1:86339478-86339652	None
ERVLE_1p22.3d	HERV	ERVLE	internal	chr1	86397810	86400070	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC119749.1	ENSG00000231349	4106	ODF2L	ENSG00000122417	1468	None	None
HERVL18_1p22.3	HERV	HERVL18	prototype	chr1	86409350	86416680	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CLCA2	ENSG00000137975	7491	AC119749.1	ENSG00000231349	4484	None	None
HERVL_1p22.3	HERV	HERVL	oneside	chr1	86511893	86514952	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CLCA1	ENSG00000016490	11634	CLCA4	ENSG00000016602	32126	None	None
HUERSP3B_1p22.3	HERV	HUERSP3B	oneside	chr1	86692599	86694874	-	noncoding	CLCA4-AS1	lncRNA	SENSE	ENSG00000236915	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p22.3c	HERV	ERV316A3	internal	chr1	87160672	87162483	+	noncoding	AC093155.3,LINC01140	protein_coding,lncRNA	SENSE,SENSE	ENSG00000267561,ENSG00000267272	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1p22.3c	HERV	ERVLB4	oneside	chr1	87800644	87803070	-	noncoding	PKN2-AS1	lncRNA	SENSE	ENSG00000237505	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1p22.2a	HERV	ERVLB4	internal	chr1	88378752	88379662	-	noncoding	PKN2-AS1	lncRNA	SENSE	ENSG00000237505	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p22.2a	HERV	ERV316A3	oneside	chr1	88575197	88577840	+	noncoding	PKN2-AS1	lncRNA	ANTISENSE	ENSG00000237505	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p22.2b	HERV	ERV316A3	oneside	chr1	88578270	88580028	+	noncoding	PKN2-AS1	lncRNA	ANTISENSE	ENSG00000237505	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1p22.2a	HERV	HERVL	prototype	chr1	88595833	88602999	+	noncoding	PKN2-AS1	lncRNA	ANTISENSE	ENSG00000237505	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1p22.2b	HERV	ERVLB4	oneside	chr1	88636269	88638131	-	noncoding	PKN2-AS1	lncRNA	SENSE	ENSG00000237505	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1p22.2c	HERV	ERVLB4	oneside	chr1	88638143	88641741	-	noncoding	PKN2-AS1	lncRNA	SENSE	ENSG00000237505	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1p22.2b	HERV	HERVL	prototype	chr1	88897656	88904723	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GTF2B	ENSG00000137947	5712	AL445991.1	ENSG00000235308	18647	None	None
HERVW_1p22.2a	HERV	HERVW	prototype	chr1	88924529	88931881	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445991.1	ENSG00000235308	685	KYAT3	ENSG00000137944	3892	None	chr1:88931878-88931879
MER101_1p22.2a	HERV	MER101	oneside	chr1	89048082	89049754	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GBP3	ENSG00000117226	25188	GBP1	ENSG00000117228	2565	None	None
HERVKC4_1p22.2	HERV	HERVKC4	internal	chr1	89086283	89088619	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTGES3P1	ENSG00000234518	15666	GBP1	ENSG00000117228	21053	None	None
MER61_1p22.2a	HERV	MER61	internal	chr1	89178360	89179158	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GBP7	ENSG00000213512	2351	GBP4	ENSG00000162654	1986	None	None
ERV316A3_1p22.2c	HERV	ERV316A3	oneside	chr1	89275321	89277392	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099063.2	ENSG00000238081	12284	GBP5	ENSG00000154451	2517	None	None
MER61_1p22.2b	HERV	MER61	oneside	chr1	89312773	89316331	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX119321.1	ENSG00000233235	8191	AC099063.2	ENSG00000238081	22436	None	None
HUERSP2_1p22.2	HERV	HUERSP2	oneside	chr1	89343973	89345043	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX119321.1	ENSG00000233235	9093	GBP6	ENSG00000183347	19015	None	None
HERVL_1p22.2c	HERV	HERVL	oneside	chr1	89345044	89349193	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX119321.1	ENSG00000233235	10164	GBP6	ENSG00000183347	14865	None	None
MER101_1p22.2b	HERV	MER101	oneside	chr1	89429509	89431206	-	noncoding	AL596214.1	lncRNA	SENSE	ENSG00000286548	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1p22.2d	HERV	HERVL	oneside	chr1	89437349	89443684	-	noncoding	AL596214.1	lncRNA	SENSE	ENSG00000286548	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p22.2d	HERV	ERV316A3	oneside	chr1	90626809	90628309	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02787	ENSG00000229201	93337	SNORD3G	ENSG00000199666	29441	None	None
ERVLE_1p22.2	HERV	ERVLE	internal	chr1	90778834	90780083	+	noncoding	LINC02609	lncRNA	ANTISENSE	ENSG00000233593	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_1p22.2e	HERV	HERVL	oneside	chr1	91039877	91041730	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL5P6	ENSG00000232393	15073	HFM1	ENSG00000162669	219036	None	None
HERVL_1p22.2f	HERV	HERVL	oneside	chr1	91041963	91046245	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL5P6	ENSG00000232393	17159	HFM1	ENSG00000162669	214521	None	None
HERVL_1p22.2g	HERV	HERVL	oneside	chr1	91055335	91056968	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HFM1	ENSG00000162669	203798	RPL5P6	ENSG00000232393	30531	None	None
HUERSP1_1p22.2	HERV	HUERSP1	prototype	chr1	91083892	91091004	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL5P6	ENSG00000232393	59088	HFM1	ENSG00000162669	169762	None	None
HERVW_1p22.2b	HERV	HERVW	oneside	chr1	91179132	91181141	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL5P6	ENSG00000232393	154328	HFM1	ENSG00000162669	79625	None	None
HARLEQUIN_1p22.2	HERV	HARLEQUIN	internal	chr1	91206976	91211402	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HFM1	ENSG00000162669	49364	RPL5P6	ENSG00000232393	182172	None	None
HML5_1p22.2	HERV	HML5	prototype	chr1	91217603	91221324	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL5P6	ENSG00000232393	192799	HFM1	ENSG00000162669	39442	None	None
HERVL_1p22.2h	HERV	HERVL	prototype	chr1	91460655	91469313	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CDC7	ENSG00000097046	31538	HFM1	ENSG00000162669	55799	None	None
HARLEQUIN_1p22.1	HERV	HARLEQUIN	prototype	chr1	91662451	91670747	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TGFBR3	ENSG00000069702	9596	HSP90B3P	ENSG00000203914	18369	None	None
MER4B_1p22.1a	HERV	MER4B	internal	chr1	91922727	91924229	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BRDT	ENSG00000137948	25142	TGFBR3	ENSG00000069702	16392	None	None
ERVLE_1p22.1a	HERV	ERVLE	oneside	chr1	92148017	92150067	+	noncoding	BTBD8	protein_coding	SENSE	ENSG00000189195	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1p22.1a	HERV	HERVL	prototype	chr1	92614392	92619505	+	noncoding	EVI5	protein_coding	ANTISENSE	ENSG00000067208	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p22.1a	HERV	ERV316A3	internal	chr1	92991647	92993456	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-210P	ENSG00000252752	16801	AC093577.2	ENSG00000287797	4280	None	None
ERVLE_1p22.1b	HERV	ERVLE	internal	chr1	92993458	92994531	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093577.2	ENSG00000287797	6091	RNU6-210P	ENSG00000252752	15726	None	None
ERV316A3_1p22.1b	HERV	ERV316A3	internal	chr1	93027536	93028194	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTF2	ENSG00000143033	51041	AC093577.1	ENSG00000251837	30	None	None
LTR23_1p22.1	HERV	LTR23	internal	chr1	93409486	93412791	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	FNBP1L	ENSG00000137942	35340	AL137159.1	ENSG00000207379	23669	None	None
MER4B_1p22.1b	HERV	MER4B	oneside	chr1	93643913	93646320	+	noncoding	BCAR3	protein_coding	ANTISENSE	ENSG00000137936	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_1p22.1c	HERV	MER4B	internal	chr1	93646622	93647466	+	noncoding	BCAR3	protein_coding	ANTISENSE	ENSG00000137936	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:93647243-93647502	None
HERVH_1p22.1	HERV	HERVH	prototype	chr1	93830337	93837088	+	noncoding	BCAR3	protein_coding	ANTISENSE	ENSG00000137936	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1p22.1b	HERV	HERVL	prototype	chr1	94161627	94167221	-	noncoding	ARHGAP29	protein_coding	SENSE	ENSG00000137962	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p22.1c	HERV	ERV316A3	oneside	chr1	94269983	94272882	+	noncoding	ARHGAP29,ARHGAP29-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000137962,ENSG00000226835	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_1p21.3	HERV	HERVL40	prototype	chr1	94349807	94353439	+	noncoding	ARHGAP29-AS1	lncRNA	SENSE	ENSG00000226835	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p21.3a	HERV	ERVLE	internal	chr1	94389823	94391768	-	noncoding	ARHGAP29-AS1	lncRNA	ANTISENSE	ENSG00000226835	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p21.3b	HERV	ERVLE	internal	chr1	94393790	94394793	-	noncoding	ARHGAP29-AS1	lncRNA	ANTISENSE	ENSG00000226835	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_1p21.3	HERV	HML3	prototype	chr1	94444820	94450789	+	coding	ABCD3	protein_coding	SENSE	ENSG00000117528	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1p21.3a	HERV	HERVH	prototype	chr1	94566478	94572826	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093117.1	ENSG00000223675	12730	F3	ENSG00000117525	24719	None	None
MER4_1p21.3	HERV	MER4	prototype	chr1	94661344	94669497	-	coding	SLC44A3-AS1	transcribed_processed_pseudogene	SENSE	ENSG00000224081	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1p21.3a	HERV	ERVLB4	internal	chr1	94785085	94786547	+	noncoding	SLC44A3-AS1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000224081	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p21.3c	HERV	ERVLE	internal	chr1	95250622	95254066	-	noncoding	AC092802.3	lncRNA	SENSE	ENSG00000228852	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p21.3d	HERV	ERVLE	internal	chr1	95572088	95574067	-	noncoding	LINC02607	lncRNA	ANTISENSE	ENSG00000228971	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1p21.3a	HERV	HERVL	oneside	chr1	95644581	95648411	-	noncoding	LINC02607	lncRNA	ANTISENSE	ENSG00000228971	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_1p21.3	HERV	MER41	oneside	chr1	95895626	95901086	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02790	ENSG00000237435	36815	LINC02607	ENSG00000228971	113284	None	None
MER61_1p21.3	HERV	MER61	oneside	chr1	96153438	96157822	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-130P	ENSG00000200800	68079	LINC02790	ENSG00000237435	130548	None	None
ERVLE_1p21.3e	HERV	ERVLE	internal	chr1	96339548	96342230	+	noncoding	LINC01787	lncRNA	ANTISENSE	ENSG00000231987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1p21.3b	HERV	HERVL	oneside	chr1	97407534	97409154	+	noncoding	DPYD,DPYD-IT1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000188641,ENSG00000232542	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p21.3a	HERV	ERV316A3	internal	chr1	97679722	97680969	+	noncoding	DPYD	protein_coding	ANTISENSE	ENSG00000188641	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_1p21.3	HERV	HUERSP2	oneside	chr1	97773376	97774644	+	noncoding	DPYD	protein_coding	ANTISENSE	ENSG00000188641	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1p21.3b	HERV	ERVLB4	internal	chr1	98642906	98643641	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01776	ENSG00000226053	370248	AC095031.1	ENSG00000280040	16747	None	None
ERVLE_1p21.3f	HERV	ERVLE	internal	chr1	98653444	98654702	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC095031.1	ENSG00000280040	5686	LINC01776	ENSG00000226053	380786	None	None
ERVLE_1p21.3g	HERV	ERVLE	internal	chr1	98657373	98659580	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01776	ENSG00000226053	384715	AC095031.1	ENSG00000280040	808	None	None
ERVLB4_1p21.3c	HERV	ERVLB4	oneside	chr1	98773793	98775877	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SNX7	ENSG00000162627	13293	PLPPR5	ENSG00000117598	114368	None	None
HERVH_1p21.3b	HERV	HERVH	prototype	chr1	98801055	98806858	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PLPPR5	ENSG00000117598	83387	SNX7	ENSG00000162627	40555	None	None
ERV316A3_1p21.3b	HERV	ERV316A3	oneside	chr1	98942499	98944900	+	noncoding	PLPPR5	protein_coding	ANTISENSE	ENSG00000117598	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1p21.2a	HERV	HERVH	prototype	chr1	99509511	99515367	+	noncoding	LINC01708	lncRNA	ANTISENSE	ENSG00000224445	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_1p21.2	HERV	MER41	prototype	chr1	99586738	99588780	-	noncoding	LINC01708	lncRNA	SENSE	ENSG00000224445	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_1p21.2a	HERV	MER34B	internal	chr1	99940845	99943100	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC118553.1	ENSG00000228084	25283	AGL	ENSG00000162688	16822	None	None
ERVLB4_1p21.2a	HERV	ERVLB4	internal	chr1	100300279	100301346	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104457.1	ENSG00000215871	30458	RTCA	ENSG00000137996	7510	None	None
ERVLE_1p21.2a	HERV	ERVLE	internal	chr1	100302577	100303717	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RTCA	ENSG00000137996	9808	AC104457.1	ENSG00000215871	28087	None	None
PRIMAX_1p21.2	HERV	PRIMAX	internal	chr1	100561997	100564010	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099670.1	ENSG00000213421	22639	GPR88	ENSG00000181656	19976	None	None
ERV316A3_1p21.2a	HERV	ERV316A3	internal	chr1	100810360	100811157	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EXTL2	ENSG00000162694	61215	VCAM1	ENSG00000162692	71315	None	None
ERV316A3_1p21.2b	HERV	ERV316A3	oneside	chr1	101266391	101269155	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL109741.2	ENSG00000228399	9775	PPIAP7	ENSG00000173810	1720	None	None
ERVLB4_1p21.2b	HERV	ERVLB4	internal	chr1	101336341	101339354	+	noncoding	LINC01307	lncRNA	SENSE	ENSG00000231671	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1p21.2	HERV	HERVL	oneside	chr1	101359129	101362553	-	noncoding	LINC01307	lncRNA	ANTISENSE	ENSG00000231671	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_1p21.2b	HERV	MER34B	internal	chr1	101494089	101495695	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01307	ENSG00000231671	103786	LINC01709	ENSG00000226715	143814	None	None
MER34B_1p21.2c	HERV	MER34B	internal	chr1	101495982	101498022	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01307	ENSG00000231671	105679	LINC01709	ENSG00000226715	141487	None	None
ERVLE_1p21.2b	HERV	ERVLE	internal	chr1	101546698	101548684	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01307	ENSG00000231671	156395	LINC01709	ENSG00000226715	90825	None	None
HERVH_1p21.2b	HERV	HERVH	prototype	chr1	101597230	101603442	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01709	ENSG00000226715	36067	LINC01307	ENSG00000231671	206927	None	None
HERVFRD_1p21.1a	HERV	HERVFRD	prototype	chr1	102045800	102048156	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OLFM3	ENSG00000118733	48770	AC114485.1	ENSG00000233359	151583	None	None
ERVLE_1p21.1a	HERV	ERVLE	internal	chr1	102081694	102083522	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OLFM3	ENSG00000118733	84664	AC114485.1	ENSG00000233359	116217	None	None
HERVI_1p21.1	HERV	HERVI	prototype	chr1	102085730	102092888	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114485.1	ENSG00000233359	106851	OLFM3	ENSG00000118733	88700	None	None
HUERSP1_1p21.1	HERV	HUERSP1	prototype	chr1	102094498	102097939	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OLFM3	ENSG00000118733	97468	AC114485.1	ENSG00000233359	101800	None	None
MER4_1p21.1	HERV	MER4	internal	chr1	102102624	102104200	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OLFM3	ENSG00000118733	105594	AC114485.1	ENSG00000233359	95539	None	None
ERV316A3_1p21.1a	HERV	ERV316A3	oneside	chr1	102173844	102176687	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114485.1	ENSG00000233359	23052	OLFM3	ENSG00000118733	176814	None	None
ERV316A3_1p21.1b	HERV	ERV316A3	internal	chr1	102399420	102400310	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114485.1	ENSG00000233359	9790	AC099567.1	ENSG00000230864	363012	None	None
HUERSP3_1p21.1	HERV	HUERSP3	prototype	chr1	102434038	102440675	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114485.1	ENSG00000233359	44408	AC099567.1	ENSG00000230864	322647	None	None
ERVLE_1p21.1b	HERV	ERVLE	internal	chr1	102518368	102520339	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099567.1	ENSG00000230864	242983	AC114485.1	ENSG00000233359	128738	None	None
HERVL_1p21.1a	HERV	HERVL	oneside	chr1	102556946	102557990	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099567.1	ENSG00000230864	205332	AC114485.1	ENSG00000233359	167316	None	None
HML6_1p21.1a	HERV	HML6	prototype	chr1	102833274	102841221	+	noncoding	AC099567.1	lncRNA	ANTISENSE	ENSG00000230864	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:102833544-102833588
ERV316A3_1p21.1c	HERV	ERV316A3	oneside	chr1	103125340	103130310	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC095032.2	ENSG00000230759	284569	COL11A1	ENSG00000060718	16468	None	None
HERVL_1p21.1b	HERV	HERVL	prototype	chr1	103266759	103273207	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	COL11A1	ENSG00000060718	157887	AC095032.2	ENSG00000230759	141672	None	None
ERV316A3_1p21.1d	HERV	ERV316A3	oneside	chr1	103473582	103475049	-	noncoding	AC095032.1	lncRNA	SENSE	ENSG00000224613	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:103473797-103474024	None
MER61_1p21.1a	HERV	MER61	internal	chr1	103589770	103593933	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AMY2A	ENSG00000243480	22878	AMY2B	ENSG00000240038	10236	None	None
LTR25_1p21.1a	HERV	LTR25	internal	chr1	103594610	103595674	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AMY2A	ENSG00000243480	21137	AMY2B	ENSG00000240038	15076	None	None
MER61_1p21.1b	HERV	MER61	internal	chr1	103625858	103628713	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AMY1A	ENSG00000237763	26577	AMY2A	ENSG00000243480	78	None	None
HERVEA_1p21.1a	HERV	HERVEA	prototype	chr1	103647685	103655525	-	noncoding	AMY1A	protein_coding	ANTISENSE	ENSG00000237763	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER61_1p21.1c	HERV	MER61	internal	chr1	103664632	103666408	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105272.1	ENSG00000234441	1663	AMY1A	ENSG00000237763	78	None	None
LTR25_1p21.1b	HERV	LTR25	internal	chr1	103667091	103667870	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105272.1	ENSG00000234441	201	AMY1A	ENSG00000237763	2537	None	None
LTR25_1p21.1c	HERV	LTR25	internal	chr1	103683814	103684878	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105272.1	ENSG00000234441	15546	AMY1B	ENSG00000174876	2537	None	None
MER61_1p21.1d	HERV	MER61	internal	chr1	103685561	103687337	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105272.1	ENSG00000234441	17293	AMY1B	ENSG00000174876	78	None	None
HERVEA_1p21.1b	HERV	HERVEA	prototype	chr1	103696445	103704285	+	noncoding	AMY1B	protein_coding	ANTISENSE	ENSG00000174876	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER61_1p21.1e	HERV	MER61	internal	chr1	103719983	103722838	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AMY1C	ENSG00000187733	27568	AMYP1	ENSG00000227408	112	None	None
HERVEA_1p21.1c	HERV	HERVEA	prototype	chr1	103741823	103749663	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AMY1C	ENSG00000187733	743	AMYP1	ENSG00000227408	21952	None	None
MER61_1p21.1f	HERV	MER61	internal	chr1	103758770	103760546	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136455.1	ENSG00000225191	166021	AMY1C	ENSG00000187733	80	None	None
LTR25_1p21.1d	HERV	LTR25	internal	chr1	103761207	103762332	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136455.1	ENSG00000225191	164235	AMY1C	ENSG00000187733	2517	None	None
HERVFRD_1p21.1b	HERV	HERVFRD	oneside	chr1	104135713	104137735	+	noncoding	AC092506.1	transcribed_processed_pseudogene	SENSE	ENSG00000215869	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1p21.1e	HERV	ERV316A3	internal	chr1	104236130	104236966	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591888.1	ENSG00000285981	761440	AC092506.1	ENSG00000215869	9452	None	None
HERVH_1p21.1a	HERV	HERVH	prototype	chr1	104380123	104388639	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092506.1	ENSG00000215869	153445	AL591888.1	ENSG00000285981	609767	None	None
ERVLE_1p21.1c	HERV	ERVLE	internal	chr1	104439378	104441252	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591888.1	ENSG00000285981	557154	AC092506.1	ENSG00000215869	212700	None	None
HERVEA_1p21.1d	HERV	HERVEA	prototype	chr1	104459780	104468646	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL591888.1	ENSG00000285981	529760	AC092506.1	ENSG00000215869	233102	None	chr1:104468303-104468313,chr1:104468344-104468353,chr1:104468379-104468390
ERVLB4_1p21.1a	HERV	ERVLB4	prototype	chr1	104470603	104474802	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092506.1	ENSG00000215869	243925	AL591888.1	ENSG00000285981	523604	None	chr1:104473317-104473328
ERVLE_1p21.1d	HERV	ERVLE	internal	chr1	104477690	104479245	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591888.1	ENSG00000285981	519161	AC092506.1	ENSG00000215869	251012	None	None
HERVL_1p21.1c	HERV	HERVL	prototype	chr1	104555600	104562197	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092506.1	ENSG00000215869	328922	AL591888.1	ENSG00000285981	436209	None	None
HERVL_1p21.1d	HERV	HERVL	internal	chr1	104578064	104582892	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591888.1	ENSG00000285981	415514	AC092506.1	ENSG00000215869	351386	None	None
HERVH_1p21.1b	HERV	HERVH	prototype	chr1	104596936	104602769	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092506.1	ENSG00000215869	370258	AL591888.1	ENSG00000285981	395637	None	None
HML6_1p21.1b	HERV	HML6	oneside	chr1	104732541	104733885	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092506.1	ENSG00000215869	505863	AL591888.1	ENSG00000285981	264521	None	None
ERV316A3_1p21.1f	HERV	ERV316A3	internal	chr1	104795005	104799851	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092506.1	ENSG00000215869	568327	AL591888.1	ENSG00000285981	198555	None	None
ERVL_1p21.1a	HERV	ERVL	internal	chr1	104881671	104882757	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092506.1	ENSG00000215869	654993	AL591888.1	ENSG00000285981	115649	None	None
ERV316A3_1p21.1g	HERV	ERV316A3	oneside	chr1	104979096	104981009	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591888.1	ENSG00000285981	17397	AC092506.1	ENSG00000215869	752418	None	None
HERVL18_1p21.1	HERV	HERVL18	prototype	chr1	105137476	105138540	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDK4P1	ENSG00000225036	295454	AL591888.1	ENSG00000285981	105111	None	None
ERVLE_1p21.1e	HERV	ERVLE	internal	chr1	105232875	105235785	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDK4P1	ENSG00000225036	198209	AL591888.1	ENSG00000285981	200510	None	None
ERV316A3_1p21.1h	HERV	ERV316A3	oneside	chr1	105238520	105240989	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDK4P1	ENSG00000225036	193005	AL591888.1	ENSG00000285981	206155	None	None
HUERSP2_1p21.1a	HERV	HUERSP2	prototype	chr1	105396367	105398967	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDK4P1	ENSG00000225036	35027	AL591888.1	ENSG00000285981	364002	None	None
ERVLB4_1p21.1b	HERV	ERVLB4	oneside	chr1	105439916	105445065	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDK4P1	ENSG00000225036	5095	LINC01676	ENSG00000230768	142510	None	None
ERVLB4_1p21.1c	HERV	ERVLB4	oneside	chr1	105518923	105520353	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01676	ENSG00000230768	67222	CDK4P1	ENSG00000225036	84102	None	None
HERVL_1p21.1e	HERV	HERVL	prototype	chr1	105522046	105528669	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01676	ENSG00000230768	58906	CDK4P1	ENSG00000225036	87225	None	None
ERVL_1p21.1b	HERV	ERVL	internal	chr1	105639314	105639857	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01676	ENSG00000230768	20323	SEPTIN2P1	ENSG00000227850	58182	None	None
ERVLB4_1p21.1d	HERV	ERVLB4	internal	chr1	105663639	105664957	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01676	ENSG00000230768	44648	SEPTIN2P1	ENSG00000227850	33082	None	None
HERVL_1p21.1f	HERV	HERVL	unknown	chr1	105752830	105759721	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SEPTIN2P1	ENSG00000227850	54612	AL512844.2	ENSG00000237897	130972	None	None
HERVL_1p21.1g	HERV	HERVL	oneside	chr1	105809774	105811221	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512844.2	ENSG00000237897	79472	SEPTIN2P1	ENSG00000227850	111556	None	None
ERV316A3_1p21.1i	HERV	ERV316A3	oneside	chr1	105817801	105819097	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512844.2	ENSG00000237897	71596	SEPTIN2P1	ENSG00000227850	119583	None	None
ERVLE_1p21.1f	HERV	ERVLE	internal	chr1	105904649	105906125	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01677	ENSG00000233047	21495	AL512844.1	ENSG00000232952	11132	None	None
HUERSP2_1p21.1b	HERV	HUERSP2	oneside	chr1	105908891	105912681	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512844.1	ENSG00000232952	15374	LINC01677	ENSG00000233047	14939	None	None
HUERSP2_1p21.1c	HERV	HUERSP2	oneside	chr1	105912732	105914841	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512844.1	ENSG00000232952	19215	LINC01677	ENSG00000233047	12779	None	None
ERVLE_1p21.1g	HERV	ERVLE	oneside	chr1	106032691	106037140	+	noncoding	AL355306.2	lncRNA	SENSE	ENSG00000237480	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_1p21.1	HERV	MER41	internal	chr1	106116173	106120631	+	noncoding	AL355306.2	lncRNA	SENSE	ENSG00000237480	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11_1p21.1	HERV	HERVK11	prototype	chr1	106159069	106162062	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355306.2	ENSG00000237480	34505	AL499605.1	ENSG00000270342	382280	None	None
ERV316A3_1p21.1j	HERV	ERV316A3	internal	chr1	106231443	106232118	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL499605.1	ENSG00000270342	312224	AL355306.2	ENSG00000237480	106879	None	None
MER61_1p21.1g	HERV	MER61	prototype	chr1	106344473	106349394	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL499605.1	ENSG00000270342	194948	AL355306.2	ENSG00000237480	219909	None	None
ERVLE_1p21.1h	HERV	ERVLE	oneside	chr1	106451709	106454233	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL499605.1	ENSG00000270342	90109	AL355306.2	ENSG00000237480	327145	None	None
HERVL_1p21.1h	HERV	HERVL	prototype	chr1	106585294	106591567	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL596327.1	ENSG00000270976	188656	AL499605.1	ENSG00000270342	40550	None	None
ERVLE_1p13.3a	HERV	ERVLE	prototype	chr1	107112076	107114542	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NTNG1	ENSG00000162631	25465	PRMT6	ENSG00000198890	44440	None	None
HERVL_1p13.3a	HERV	HERVL	internal	chr1	107568515	107570449	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114491.1	ENSG00000224550	63067	VAV3	ENSG00000134215	712	None	None
HERVL_1p13.3b	HERV	HERVL	prototype	chr1	108018546	108023153	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02785	ENSG00000226822	17110	VAV3-AS1	ENSG00000230489	23939	None	None
ERVLE_1p13.3b	HERV	ERVLE	internal	chr1	108065479	108067847	-	noncoding	LINC02785	lncRNA	ANTISENSE	ENSG00000226822	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1p13.3	HERV	HERVH	prototype	chr1	108473290	108478596	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NBPF6	ENSG00000186086	2288	AL392088.2	ENSG00000283354	16879	None	None
ERV316A3_1p13.3a	HERV	ERV316A3	oneside	chr1	109430469	109433302	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSMA5	ENSG00000143106	4021	SYPL2	ENSG00000143028	33244	None	None
ERV316A3_1p13.3b	HERV	ERV316A3	oneside	chr1	109436278	109439099	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSMA5	ENSG00000143106	9830	SYPL2	ENSG00000143028	27447	chr1:109438896-109439082	None
MER41_1p13.3	HERV	MER41	internal	chr1	109452767	109456086	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SYPL2	ENSG00000143028	10460	PSMA5	ENSG00000143106	26319	None	None
HERVK11_1p13.3	HERV	HERVK11	prototype	chr1	109702615	109709643	+	noncoding	GSTM2,GSTM1	protein_coding,protein_coding	SENSE,SENSE	ENSG00000213366,ENSG00000134184	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HML6_1p13.3	HERV	HML6	oneside	chr1	109725517	109727169	+	noncoding	GSTM5,AL158847.1	protein_coding,lncRNA	SENSE,SENSE	ENSG00000134201,ENSG00000241720	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PABLA_1p13.3	HERV	PABLA	internal	chr1	109727607	109728490	-	noncoding	GSTM5,AL158847.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000134201,ENSG00000241720	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_1p13.3	HERV	PRIMA4	internal	chr1	109728800	109729846	-	noncoding	GSTM5,AL158847.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000134201,ENSG00000241720	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:109728904-109729204	None
HUERSP1_1p13.3	HERV	HUERSP1	prototype	chr1	109831306	109839763	+	noncoding	LINC01768	lncRNA	SENSE	ENSG00000228420	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVW_1p13.3	HERV	HERVW	prototype	chr1	109852233	109858142	-	noncoding	LINC01768	lncRNA	ANTISENSE	ENSG00000228420	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_1p13.3	HERV	HUERSP3	prototype	chr1	111027825	111033434	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCNT2P1	ENSG00000225672	12295	RNA5SP54	ENSG00000252760	8400	None	None
ERVLE_1p13.2a	HERV	ERVLE	internal	chr1	111433796	111435683	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390195.3	ENSG00000260948	728	UBE2FP3	ENSG00000233337	1831	None	None
ERVLE_1p13.2b	HERV	ERVLE	internal	chr1	112097132	112101265	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01750	ENSG00000231437	98290	AL445426.1	ENSG00000231246	75969	None	None
HERVL_1p13.2a	HERV	HERVL	prototype	chr1	112126003	112132607	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL445426.1	ENSG00000231246	44627	LINC01750	ENSG00000231437	127161	None	None
ERVLE_1p13.2c	HERV	ERVLE	internal	chr1	112219335	112220398	+	noncoding	AL445426.1	lncRNA	ANTISENSE	ENSG00000231246	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p13.2d	HERV	ERVLE	internal	chr1	112274154	112278673	+	noncoding	AL445426.1	lncRNA	ANTISENSE	ENSG00000231246	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p13.2e	HERV	ERVLE	internal	chr1	112734675	112738529	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TAFA3	ENSG00000184599	7440	NUTF2P4	ENSG00000234790	9566	None	None
HERVH_1p13.2a	HERV	HERVH	prototype	chr1	112809667	112815325	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NUTF2P4	ENSG00000234790	61192	LINC01356	ENSG00000215866	4845	None	chr1:112809973-112809976
HERVH_1p13.2b	HERV	HERVH	prototype	chr1	112820145	112826054	-	noncoding	LINC01356	lncRNA	SENSE	ENSG00000215866	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:112823696-112823703,chr1:112825670-112825703
HARLEQUIN_1p13.2a	HERV	HARLEQUIN	prototype	chr1	112826180	112832724	+	noncoding	LINC01356	lncRNA	ANTISENSE	ENSG00000215866	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr1:112826074-112826516	None
MER34B_1p13.2	HERV	MER34B	internal	chr1	112888845	112896088	-	noncoding	AL390729.1	processed_pseudogene	SENSE	ENSG00000228040	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:112895641-112895648
HERVH_1p13.2c	HERV	HERVH	oneside	chr1	114029672	114032484	+	noncoding	OLFML3,AL591742.2	protein_coding,lncRNA	SENSE,SENSE	ENSG00000116774,ENSG00000282048	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:114032376-114032378
HERVL_1p13.2b	HERV	HERVL	prototype	chr1	114065118	114071980	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SYT6	ENSG00000134207	17311	OLFML3	ENSG00000116774	29546	None	None
ERVLE_1p13.2f	HERV	ERVLE	internal	chr1	114264637	114265485	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPL57P1	ENSG00000273698	13526	AL121999.1	ENSG00000232895	2359	None	None
MER4_1p13.2a	HERV	MER4	oneside	chr1	114360884	114362960	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL035410.2	ENSG00000271419	5706	TRIM33	ENSG00000197323	29830	None	None
HARLEQUIN_1p13.2b	HERV	HARLEQUIN	prototype	chr1	114362968	114369592	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRIM33	ENSG00000197323	23198	AL035410.2	ENSG00000271419	7790	None	None
MER4_1p13.2b	HERV	MER4	oneside	chr1	114369593	114376478	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL035410.2	ENSG00000271419	14415	TRIM33	ENSG00000197323	16312	None	None
MER4B_1p13.2	HERV	MER4B	internal	chr1	114454216	114455874	+	noncoding	TRIM33	protein_coding	ANTISENSE	ENSG00000197323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:114455224-114455228
MER101_1p13.2	HERV	MER101	internal	chr1	114782850	114783666	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NR1H5P	ENSG00000227970	53561	SIKE1	ENSG00000052723	2165	None	None
LTR57_1p13.2	HERV	LTR57	internal	chr1	114793614	114795154	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NR1H5P	ENSG00000227970	42073	SIKE1	ENSG00000052723	12929	None	None
MER61_1p13.2a	HERV	MER61	oneside	chr1	114829874	114832914	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NR1H5P	ENSG00000227970	4313	SIKE1	ENSG00000052723	49189	None	None
MER61_1p13.2b	HERV	MER61	prototype	chr1	114896810	114902666	-	noncoding	SYCP1	protein_coding	ANTISENSE	ENSG00000198765	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:114902395-114902878	chr1:114901900-114901923
HERVL_1p13.2c	HERV	HERVL	opposite*	chr1	115005286	115011033	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TSHB	ENSG00000134200	18793	SYCP1	ENSG00000198765	9916	None	None
ERVL_1p13.2	HERV	ERVL	oneside	chr1	115389845	115391814	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NGF-AS1	ENSG00000228035	21773	AL512638.1	ENSG00000226973	80127	None	None
HERVH_1p13.1a	HERV	HERVH	prototype	chr1	115509141	115515447	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP20	ENSG00000229101	41379	AL512638.2	ENSG00000274468	27569	None	None
MER61_1p13.1	HERV	MER61	prototype	chr1	115587187	115593011	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL592436.2	ENSG00000270631	9401	RN7SL420P	ENSG00000239984	13460	None	None
ERVL_1p13.1	HERV	ERVL	prototype	chr1	115596632	115598591	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL420P	ENSG00000239984	7880	AL592436.2	ENSG00000270631	18846	None	None
HERVH_1p13.1b	HERV	HERVH	prototype	chr1	116862347	116868395	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FTH1P22	ENSG00000225079	86724	AL157904.1	ENSG00000272715	40754	None	None
HERVL18_1p12	HERV	HERVL18	prototype	chr1	117815334	117822010	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GDAP2	ENSG00000196505	41475	PNRC2P1	ENSG00000228217	36828	None	chr1:117821038-117821052,chr1:117821799-117821804
HERV9_1p12	HERV	HERV9	prototype	chr1	118225552	118233433	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL391557.1	ENSG00000287980	18501	RNA5SP56	ENSG00000222209	30939	None	None
ERVLE_1p12a	HERV	ERVLE	internal	chr1	118335374	118336510	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSMC1P12	ENSG00000226126	277823	RNA5SP56	ENSG00000222209	70885	None	None
ERV316A3_1p12	HERV	ERV316A3	oneside	chr1	118345271	118346978	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP56	ENSG00000222209	80782	PSMC1P12	ENSG00000226126	267355	None	None
HERVW_1p12a	HERV	HERVW	oneside	chr1	119168299	119171363	-	noncoding	WARS2-AS1	lncRNA	ANTISENSE	ENSG00000231365	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_1p12b	HERV	HERVW	oneside	chr1	119180393	119183271	-	noncoding	WARS2-AS1	lncRNA	ANTISENSE	ENSG00000231365	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_1p12a	HERV	MER4	oneside	chr1	119342762	119344705	-	noncoding	LINC01780	lncRNA	ANTISENSE	ENSG00000232650	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_1p12b	HERV	MER4	oneside	chr1	119344853	119349337	-	noncoding	LINC01780	lncRNA	ANTISENSE	ENSG00000232650	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_1p12a	HERV	PRIMA4	prototype	chr1	119423264	119431906	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP74	ENSG00000232780	2260	HSD3B2	ENSG00000203859	229	None	None
HUERSP2_1p12	HERV	HUERSP2	oneside	chr1	119471699	119472820	-	noncoding	HSD3BP1	unprocessed_pseudogene	ANTISENSE	ENSG00000187481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_1p12	HERV	LTR19	prototype	chr1	119483723	119489581	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP58	ENSG00000229570	6255	HSD3BP1	ENSG00000187481	9920	chr1:119483835-119484236	None
HERVL_1p12	HERV	HERVL	oneside	chr1	120001503	120003474	+	noncoding	NOTCH2	protein_coding	ANTISENSE	ENSG00000134250	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_1p12b	HERV	PRIMA4	internal	chr1	120348435	120350434	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC244669.1	ENSG00000223804	6564	FP325311.1	ENSG00000273727	4553	None	None
ERVLE_1p12b	HERV	ERVLE	internal	chr1	120372186	120372983	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FP325311.1	ENSG00000273727	17038	NBPF8	ENSG00000270231	46867	None	None
HERVL_1p11.2	HERV	HERVL	oneside	chr1	120787088	120789061	-	noncoding	AC253572.1,NBPF26	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000286106,ENSG00000273136	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1p11.2	HERV	ERVLE	internal	chr1	120887636	120890955	+	coding	PPIAL4A	protein_coding	SENSE	ENSG00000263353	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVH_1p11.2	HERV	HERVH	oneside	chr1	120955899	120957584	-	noncoding	LINC00623	lncRNA	ANTISENSE	ENSG00000226067	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_1p11.2	HERV	MER4	oneside	chr1	120957935	120959458	-	noncoding	LINC00623	lncRNA	ANTISENSE	ENSG00000226067	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_1p11.2	HERV	HERVL40	internal	chr1	121054903	121055781	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC241377.2	ENSG00000275296	3167	AC241377.3	ENSG00000275585	2736	None	None
ERV316A3_1p11.2	HERV	ERV316A3	internal	chr1	121484168	121489258	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02798	ENSG00000227082	20660	AL592494.1	ENSG00000228826	5071	None	None
ERVLE_1q21.1a	HERV	ERVLE	internal	chr1	143627131	143627714	-	noncoding	NBPF17P	unprocessed_pseudogene	SENSE	ENSG00000179571	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_1q21.1a	HERV	PRIMA4	internal	chr1	143706462	143708110	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNVU1-23	ENSG00000252826	12400	RNVU1-17	ENSG00000207349	6843	None	None
HERVL40_1q21.1	HERV	HERVL40	internal	chr1	143842027	143842645	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC239798.2	ENSG00000237503	3452	AC239798.1	ENSG00000233430	16190	None	None
ERVLB4_1q21.1a	HERV	ERVLB4	oneside	chr1	144120483	144121627	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC244015.1	ENSG00000275075	47125	IGKV1OR1-1	ENSG00000276674	34385	None	None
ERVLE_1q21.1b	HERV	ERVLE	internal	chr1	144372445	144375748	-	coding	PPIAL4E	protein_coding	SENSE	ENSG00000271567	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_1q21.1b	HERV	PRIMA4	internal	chr1	144528574	144530574	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNVU1-2A	ENSG00000278099	21205	RNVU1-26	ENSG00000275291	4553	None	None
ERVLE_1q21.1c	HERV	ERVLE	internal	chr1	144590775	144594077	+	coding	PPIAL4F	protein_coding	SENSE	ENSG00000279782	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1q21.1b	HERV	ERVLB4	oneside	chr1	144843846	144844990	+	noncoding	FP700111.1	lncRNA	SENSE	ENSG00000224363	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q21.1d	HERV	ERVLE	internal	chr1	145240985	145244282	-	coding	PPIAL4D	protein_coding	SENSE	ENSG00000256374	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_1q21.1c	HERV	PRIMA4	internal	chr1	145472066	145473413	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC239860.4	ENSG00000287374	2193	RNVU1-31	ENSG00000270722	6286	None	None
HERVL_1q21.1a	HERV	HERVL	oneside	chr1	146160946	146162896	+	noncoding	NBPF10,NOTCH2NLA	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000271425,ENSG00000264343	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q21.1e	HERV	ERVLE	internal	chr1	146343581	146346899	-	coding	SEC22B4P,PPIAL4H	transcribed_unprocessed_pseudogene,protein_coding	SENSE,SENSE	ENSG00000277406,ENSG00000270339	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	chr1:146261741-148712511
LTR23_1q21.1	HERV	LTR23	internal	chr1	146382796	146386237	+	noncoding	SEC22B4P	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000277406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:146261741-148712511
PRIMA4_1q21.1d	HERV	PRIMA4	internal	chr1	146403336	146405352	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SEC22B4P	ENSG00000277406	1689	RNVU1-25	ENSG00000274428	4551	None	chr1:146261741-148712511
ERVLE_1q21.1f	HERV	ERVLE	internal	chr1	146427075	146427872	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNVU1-25	ENSG00000274428	17013	AC245407.1	ENSG00000277655	31577	None	chr1:146261741-148712511
PRIMA4_1q21.1e	HERV	PRIMA4	internal	chr1	146475429	146477141	-	noncoding	HYDIN2	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000276975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:146261741-148712511
HERVL_1q21.1b	HERV	HERVL	oneside	chr1	147147589	147148685	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC241584.2	ENSG00000283342	23304	PRKAB2	ENSG00000131791	6421	None	chr1:146261741-148712511
HERVL18_1q21.2	HERV	HERVL18	prototype	chr1	147717143	147719676	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC241644.1	ENSG00000227139	17808	GJA5	ENSG00000265107	36523	chr1:147717063-147717331	chr1:146261741-148712511
ERVLE_1q21.2c	HERV	ERVLE	insert*	chr1	147743660	147745882	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC241644.1	ENSG00000227139	44325	GJA5	ENSG00000265107	10317	None	chr1:146261741-148712511
PRIMA4_1q21.2a	HERV	PRIMA4	internal	chr1	148045199	148046546	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PDE4DIPP1	ENSG00000229828	34052	RNVU1-7	ENSG00000206585	6283	None	chr1:146261741-148712511
PRIMA4_1q21.2b	HERV	PRIMA4	internal	chr1	148256217	148257928	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC239809.3	ENSG00000227733	1205	RNVU1-22	ENSG00000199879	5548	None	chr1:146261741-148712511
HARLEQUIN_1q21.2	HERV	HARLEQUIN	oneside	chr1	148323682	148325418	-	noncoding	LINC01138,AC245100.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000274020,ENSG00000224481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:146261741-148712511
PRIMA4_1q21.2c	HERV	PRIMA4	internal	chr1	148367053	148369350	-	noncoding	LINC01138	lncRNA	SENSE	ENSG00000274020	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:146261741-148712511
MER4_1q21.2	HERV	MER4	oneside	chr1	148409788	148410690	-	noncoding	LINC01138,AC245100.4	lncRNA,transcribed_unprocessed_pseudogene	SENSE,ANTISENSE	ENSG00000274020,ENSG00000231551	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:146261741-148712511
ERVLE_1q21.2a	HERV	ERVLE	internal	chr1	148482118	148485772	-	coding	LINC01138,PPIAL4G	lncRNA,protein_coding	SENSE,SENSE	ENSG00000274020,ENSG00000236334	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	chr1:146261741-148712511
HERVL_1q21.2a	HERV	HERVL	oneside	chr1	148611864	148613835	+	noncoding	NBPF14,NOTCH2NLB	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000270629,ENSG00000286019	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:146261741-148712511
PRIMA4_1q21.2d	HERV	PRIMA4	internal	chr1	149167499	149169496	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC245297.4	ENSG00000274265	6252	RNVU1-24	ENSG00000201699	4555	None	None
HERVL_1q21.2b	HERV	HERVL	oneside	chr1	149457432	149459404	-	noncoding	NOTCH2NLC,AC242842.3	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000286219,ENSG00000286185	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q21.2b	HERV	ERVLE	internal	chr1	149582081	149585032	+	coding	PPIAL4C	protein_coding	SENSE	ENSG00000263464	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_1q21.2	HERV	HERVL40	internal	chr1	149750544	149751161	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC243772.1	ENSG00000226500	3140	AC243772.3	ENSG00000234232	2726	None	None
ERV316A3_1q21.2	HERV	ERV316A3	oneside	chr1	150165565	150170972	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PLEKHO1	ENSG00000023902	845	AC242988.2	ENSG00000285554	2077	chr1:150165991-150166325	None
HML2_1q21.3	HERV	HML2	internal	chr1	150632886	150634662	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GOLPH3L	ENSG00000143457	11568	ENSA	ENSG00000143420	3274	None	None
HML3_1q21.3a	HERV	HML3	oneside	chr1	150654577	150659716	+	noncoding	GOLPH3L	protein_coding	ANTISENSE	ENSG00000143457	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_1q21.3a	HERV	MER41	oneside	chr1	151075748	151077198	-	noncoding	GABPB2	protein_coding	ANTISENSE	ENSG00000143458	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q21.3a	HERV	ERVLE	internal	chr1	151381668	151384894	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SELENBP1	ENSG00000143416	8961	PSMB4	ENSG00000159377	14666	None	None
ERV316A3_1q21.3a	HERV	ERV316A3	prototype	chr1	151498455	151503350	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CGN	ENSG00000143375	7160	POGZ	ENSG00000143442	38961	None	None
ERV316A3_1q21.3b	HERV	ERV316A3	oneside	chr1	151753504	151757274	+	noncoding	AL589765.7	lncRNA	SENSE	ENSG00000269621	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER61_1q21.3	HERV	MER61	internal	chr1	151907955	151909112	+	noncoding	THEM4	protein_coding	ANTISENSE	ENSG00000159445	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_1q21.3a	HERV	MER4B	internal	chr1	151926885	151928589	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	THEM4	ENSG00000159445	17248	AL450992.4	ENSG00000286581	16301	None	None
MER4B_1q21.3b	HERV	MER4B	oneside	chr1	151928886	151930233	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	THEM4	ENSG00000159445	19249	AL450992.4	ENSG00000286581	14657	None	None
ERVLE_1q21.3b	HERV	ERVLE	internal	chr1	151965493	151970642	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	S100A10	ENSG00000197747	12273	AL450992.4	ENSG00000286581	11508	None	None
HERVL_1q21.3	HERV	HERVL	internal	chr1	152252586	152253636	-	noncoding	FLG-AS1	lncRNA	ANTISENSE	ENSG00000237975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_1q21.3	HERV	HUERSP2	prototype	chr1	152377816	152381649	-	noncoding	FLG-AS1	lncRNA	ANTISENSE	ENSG00000237975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_1q21.3b	HERV	HML3	prototype	chr1	152421227	152424687	-	noncoding	FLG-AS1	lncRNA	ANTISENSE	ENSG00000237975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_1q21.3	HERV	HERVP71A	oneside	chr1	152481514	152486442	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LCE5A	ENSG00000186207	24361	FLG-AS1	ENSG00000237975	36058	None	None
ERVLB4_1q21.3	HERV	ERVLB4	oneside	chr1	152815774	152818436	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LCE1B	ENSG00000196734	2666	LCE1A	ENSG00000186844	9037	None	None
MER4_1q21.3	HERV	MER4	oneside	chr1	153020541	153021693	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356867.2	ENSG00000252920	7927	AL356867.1	ENSG00000234262	2269	None	None
MER101_1q21.3	HERV	MER101	oneside	chr1	153274519	153276933	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LOR	ENSG00000203782	12395	PGLYRP3	ENSG00000159527	20929	None	None
ERV316A3_1q21.3c	HERV	ERV316A3	oneside	chr1	153434213	153435178	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	S100A7P1	ENSG00000203781	5812	S100A7L2	ENSG00000197364	1880	None	None
ERV316A3_1q21.3d	HERV	ERV316A3	oneside	chr1	153470032	153474206	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL44P	ENSG00000263841	26257	S100A7	ENSG00000143556	9381	None	None
HUERSP3B_1q21.3	HERV	HUERSP3B	prototype	chr1	153603714	153606012	+	noncoding	BX470102.2	lncRNA	ANTISENSE	ENSG00000285867	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_1q21.3c	HERV	HML3	prototype	chr1	154047362	154053911	+	coding	NUP210L	protein_coding	ANTISENSE	ENSG00000143552	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1q21.3e	HERV	ERV316A3	internal	chr1	154302860	154306031	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL354980.2	ENSG00000278694	6431	RNU6-121P	ENSG00000222457	5112	None	None
ERV316A3_1q21.3f	HERV	ERV316A3	internal	chr1	154306075	154308655	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL354980.2	ENSG00000278694	3807	RNU6-121P	ENSG00000222457	8327	None	None
MER41_1q21.3b	HERV	MER41	oneside	chr1	154316048	154318840	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL354980.2	ENSG00000278694	2964	AQP10	ENSG00000143595	2250	None	None
HERVW_1q22	HERV	HERVW	internal	chr1	155622390	155626664	-	noncoding	AL353807.3	unprocessed_pseudogene	SENSE	ENSG00000246203	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_1q22	HERV	HML2	prototype	chr1	155626666	155635845	-	coding	AL353807.3,AL353807.5	unprocessed_pseudogene,lncRNA	SENSE,SENSE	ENSG00000246203,ENSG00000287839	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
LTR25_1q22	HERV	LTR25	oneside	chr1	155637970	155646274	-	noncoding	AL353807.3	unprocessed_pseudogene	SENSE	ENSG00000246203	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:155642335-155642339
HERV4_1q22a	HERV	HERV4	oneside	chr1	155650269	155652714	-	noncoding	AL353807.3	unprocessed_pseudogene	SENSE	ENSG00000246203	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr1:155650447-155650832	chr1:155650825-155650832,chr1:155651581-155651585
HERV4_1q22b	HERV	HERV4	oneside	chr1	155652865	155659627	-	noncoding	AL353807.3,YY1AP1	unprocessed_pseudogene,protein_coding	SENSE,SENSE	ENSG00000246203,ENSG00000163374	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVKC4_1q22	HERV	HERVKC4	prototype	chr1	155691833	155699521	-	coding	DAP3	protein_coding	ANTISENSE	ENSG00000132676	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_1q22	HERV	HML5	prototype	chr1	156184304	156189713	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL135927.1	ENSG00000252236	2350	SEMA4A	ENSG00000196189	6552	None	None
ERVLB4_1q22	HERV	ERVLB4	internal	chr1	156352219	156354825	-	noncoding	CCT3	protein_coding	SENSE	ENSG00000163468	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q23.1a	HERV	ERVLE	internal	chr1	156633288	156635215	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL365181.2	ENSG00000272068	2568	HAPLN2	ENSG00000132702	7563	None	None
ERVLE_1q23.1b	HERV	ERVLE	internal	chr1	156822631	156823980	-	noncoding	NTRK1	protein_coding	ANTISENSE	ENSG00000198400	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q23.1c	HERV	ERVLE	internal	chr1	156824049	156825375	-	noncoding	NTRK1	protein_coding	ANTISENSE	ENSG00000198400	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q23.1d	HERV	ERVLE	internal	chr1	157227206	157228458	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138900.1	ENSG00000228239	3773	AL357143.2	ENSG00000284592	22166	None	None
HERVFH21_1q23.1	HERV	HERVFH21	prototype	chr1	157273298	157279886	-	noncoding	LINC02772	lncRNA	ANTISENSE	ENSG00000271736	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr1:157276090-157276340,chr1:157278653-157279068,chr1:157279472-157279872	chr1:157274870-157274893,chr1:157275089-157275108,chr1:157275128-157275140,chr1:157279404-157279413
MER4_1q23.1	HERV	MER4	prototype	chr1	157325277	157331991	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138900.2	ENSG00000286073	14622	AL732406.1	ENSG00000286151	68936	None	None
PABLA_1q23.1a	HERV	PABLA	oneside	chr1	157356841	157359358	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138900.2	ENSG00000286073	46186	AL732406.1	ENSG00000286151	41569	None	None
MER61_1q23.1a	HERV	MER61	prototype	chr1	157364531	157367112	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL732406.1	ENSG00000286151	33815	AL138900.2	ENSG00000286073	53876	None	None
HERVL66_1q23.1	HERV	HERVL66	prototype	chr1	157429092	157433731	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL732406.1	ENSG00000286151	11833	AL353899.1	ENSG00000286005	3753	None	None
LTR19_1q23.1	HERV	LTR19	oneside	chr1	157433733	157436182	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL732406.1	ENSG00000286151	16474	AL353899.1	ENSG00000286005	1302	None	None
PABLA_1q23.1b	HERV	PABLA	prototype	chr1	157441711	157448932	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	FCRL5	ENSG00000143297	64445	AL353899.1	ENSG00000286005	3957	None	chr1:157445821-157445825
HERVL_1q23.1a	HERV	HERVL	prototype	chr1	157456874	157463360	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	FCRL5	ENSG00000143297	50017	AL353899.1	ENSG00000286005	19120	None	None
ERVLE_1q23.1e	HERV	ERVLE	internal	chr1	157464542	157465764	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353899.1	ENSG00000286005	26788	FCRL5	ENSG00000143297	47613	None	None
MER61_1q23.1b	HERV	MER61	prototype	chr1	157499145	157505063	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353899.1	ENSG00000286005	61391	FCRL5	ENSG00000143297	8314	None	None
HERVL_1q23.1b	HERV	HERVL	internal	chr1	157571521	157572818	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FCRL5	ENSG00000143297	19006	FCRL4	ENSG00000163518	929	None	None
ERVLE_1q23.1f	HERV	ERVLE	internal	chr1	157650881	157651732	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL135929.1	ENSG00000233712	10580	FCRL3	ENSG00000160856	22589	None	None
ERVLB4_1q23.1a	HERV	ERVLB4	oneside	chr1	157823567	157827775	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CD5L	ENSG00000073754	3136	FCRL1	ENSG00000163534	3447	None	None
HERVL_1q23.1c	HERV	HERVL	prototype	chr1	157883692	157886471	+	noncoding	CD5L	protein_coding	ANTISENSE	ENSG00000073754	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q23.1g	HERV	ERVLE	internal	chr1	157936895	157937530	+	noncoding	AL139010.1	transcribed_unprocessed_pseudogene	SENSE	ENSG00000236957	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_1q23.1	HERV	MER34B	internal	chr1	158169442	158173029	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01704	ENSG00000231666	19632	ELL2P1	ENSG00000227295	2821	None	None
ERVLE_1q23.1h	HERV	ERVLE	internal	chr1	158393156	158393769	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR10T2	ENSG00000186306	4753	CD1E	ENSG00000158488	35603	None	None
ERVLE_1q23.1i	HERV	ERVLE	internal	chr1	158405972	158407218	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR10K2	ENSG00000180708	10992	OR10T2	ENSG00000186306	6506	None	None
ERVLB4_1q23.1b	HERV	ERVLB4	oneside	chr1	158695922	158697077	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR6K1P	ENSG00000231237	413	OR6K2	ENSG00000196171	2601	None	None
HML5_1q23.1	HERV	HML5	oneside	chr1	158947555	158952739	-	noncoding	PYHIN1	protein_coding	ANTISENSE	ENSG00000163564	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:158952125-158952132
HERVIP10FH_1q23.1	HERV	HERVIP10FH	oneside	chr1	159022297	159025513	-	noncoding	IFI16	protein_coding	ANTISENSE	ENSG00000163565	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:159024897-159025358	chr1:159024957-159024959
MER61_1q23.1c	HERV	MER61	prototype	chr1	159056048	159059052	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AIM2	ENSG00000163568	3432	IFI16	ENSG00000163565	893	None	chr1:159056714-159056718
ERVLE_1q23.2a	HERV	ERVLE	internal	chr1	159338797	159340297	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR10J3	ENSG00000196266	24138	AL513323.1	ENSG00000228560	5869	None	None
ERV316A3_1q23.2	HERV	ERV316A3	oneside	chr1	159475002	159478088	+	noncoding	LINC02819	lncRNA	SENSE	ENSG00000224943	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q23.2d	HERV	ERVLE	opposite*	chr1	159516161	159518192	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02819	ENSG00000224943	32785	OR10J5	ENSG00000184155	16886	None	None
HERVL_1q23.2	HERV	HERVL	internal	chr1	159643998	159645594	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR10J6P	ENSG00000158731	44771	AL445528.2	ENSG00000276632	3557	None	None
MER4B_1q23.2	HERV	MER4B	prototype	chr1	159667533	159671585	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CRPP1	ENSG00000223603	33398	AL445528.2	ENSG00000276632	17913	None	None
ERVLE_1q23.2b	HERV	ERVLE	internal	chr1	160271999	160276689	-	noncoding	AL139011.2	protein_coding	SENSE	ENSG00000258465	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:160272300-160272488	None
ERVLE_1q23.2c	HERV	ERVLE	internal	chr1	160438821	160439534	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLAMF6	ENSG00000162739	45496	VANGL2	ENSG00000162738	10151	None	None
HERVK11_1q23.3a	HERV	HERVK11	oneside	chr1	160686556	160690784	-	noncoding	AL121985.1,CD48	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000228863,ENSG00000117091	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML2_1q23.3	HERV	HML2	prototype	chr1	160690785	160700016	+	noncoding	AL121985.1,CD48	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000228863,ENSG00000117091	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVK11_1q23.3b	HERV	HERVK11	internal	chr1	160700017	160703548	-	noncoding	CD48	protein_coding	SENSE	ENSG00000117091	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_1q23.3	HERV	HERVFRD	oneside	chr1	160716837	160722446	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CD48	ENSG00000117091	5006	SLAMF7	ENSG00000026751	16611	None	None
ERVLB4_1q23.3a	HERV	ERVLB4	prototype	chr1	160758515	160765919	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121985.3	ENSG00000275801	10035	SLAMF7	ENSG00000026751	3694	None	None
ERVLE_1q23.3a	HERV	ERVLE	internal	chr1	161295147	161297592	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PCP4L1	ENSG00000248485	9697	MPZ	ENSG00000158887	7143	None	None
HERV3_1q23.3	HERV	HERV3	internal	chr1	161404661	161410464	-	coding	AL592295.4,AL592295.3,AL592295.1	lncRNA,lncRNA,processed_pseudogene	ANTISENSE,SENSE,ANTISENSE	ENSG00000283696,ENSG00000283360,ENSG00000215840	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_1q23.3a	HERV	HERVL	prototype	chr1	161431187	161439039	-	coding	AL592295.3,AL831711.1	lncRNA,lncRNA	SENSE,SENSE	ENSG00000283360,ENSG00000283317	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_1q23.3	HERV	HUERSP3	oneside	chr1	161483098	161488577	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FCGR2A	ENSG00000143226	16853	AL592295.3	ENSG00000283360	12575	None	None
HML1_1q23.3	HERV	HML1	internal	chr1	161489309	161491458	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL592295.3	ENSG00000283360	18786	FCGR2A	ENSG00000143226	13972	None	None
MER34B_1q23.3a	HERV	MER34B	internal	chr1	161514473	161517154	+	noncoding	FCGR2A,AL590385.2	protein_coding,lncRNA	SENSE,SENSE	ENSG00000143226,ENSG00000273112	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER34B_1q23.3b	HERV	MER34B	internal	chr1	161596130	161598811	+	noncoding	AL590385.2,FCGR2C	lncRNA,polymorphic_pseudogene	SENSE,SENSE	ENSG00000273112,ENSG00000244682	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1q23.3a	HERV	ERV316A3	internal	chr1	162896813	162901616	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC190	ENSG00000185860	27998	AL392003.1	ENSG00000227667	77935	None	None
HERVL_1q23.3b	HERV	HERVL	oneside	chr1	163097896	163102344	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RGS4	ENSG00000117152	21094	RGS5	ENSG00000143248	8777	None	None
ERVLE_1q23.3b	HERV	ERVLE	internal	chr1	163221169	163223907	-	noncoding	RGS5	protein_coding	SENSE	ENSG00000143248	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_1q23.3	HERV	MER4B	oneside	chr1	163275862	163277447	+	noncoding	RGS5,AL592435.1,NUF2	protein_coding,lncRNA,protein_coding	ANTISENSE,ANTISENSE,SENSE	ENSG00000143248,ENSG00000232995,ENSG00000143228	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1q23.3	HERV	HERVH	prototype	chr1	163591309	163596529	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP63	ENSG00000212527	81714	AL355862.1	ENSG00000228289	172810	None	None
ERVLB4_1q23.3b	HERV	ERVLB4	prototype	chr1	163597992	163601391	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP63	ENSG00000212527	88397	AL355862.1	ENSG00000228289	167948	None	None
ERVLB4_1q23.3c	HERV	ERVLB4	internal	chr1	163812936	163814471	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358875.1	ENSG00000212538	109199	AL355862.1	ENSG00000228289	43245	None	None
ERV316A3_1q23.3b	HERV	ERV316A3	internal	chr1	163889738	163891380	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358875.1	ENSG00000212538	32290	AL355862.1	ENSG00000228289	120047	None	None
ERVLB4_1q23.3d	HERV	ERVLB4	oneside	chr1	164026723	164032424	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NMNAT1P2	ENSG00000225719	310581	AL358875.1	ENSG00000212538	102850	None	None
ERVLB4_1q23.3e	HERV	ERVLB4	oneside	chr1	164079514	164082802	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358875.1	ENSG00000212538	155641	NMNAT1P2	ENSG00000225719	260203	None	None
ERV316A3_1q23.3c	HERV	ERV316A3	oneside	chr1	164147817	164151389	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358875.1	ENSG00000212538	223944	NMNAT1P2	ENSG00000225719	191616	None	None
ERVLB4_1q23.3f	HERV	ERVLB4	oneside	chr1	164206186	164211462	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358875.1	ENSG00000212538	282313	NMNAT1P2	ENSG00000225719	131543	None	None
ERVLB4_1q23.3g	HERV	ERVLB4	oneside	chr1	164272002	164273987	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NMNAT1P2	ENSG00000225719	69018	AL358875.1	ENSG00000212538	348129	None	None
ERV316A3_1q23.3d	HERV	ERV316A3	oneside	chr1	164370613	164371862	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PBX1	ENSG00000185630	183722	HMGB3P6	ENSG00000213070	13249	chr1:164370895-164371257	None
ERV316A3_1q23.3e	HERV	ERV316A3	internal	chr1	164465893	164469347	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PBX1	ENSG00000185630	86237	HMGB3P6	ENSG00000213070	108529	None	None
ERV316A3_1q23.3f	HERV	ERV316A3	oneside	chr1	164469401	164470914	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PBX1	ENSG00000185630	84670	HMGB3P6	ENSG00000213070	112037	None	None
ERVLB4_1q23.3h	HERV	ERVLB4	oneside	chr1	164508061	164510104	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PBX1	ENSG00000185630	45480	HMGB3P6	ENSG00000213070	150697	None	None
ERV316A3_1q23.3g	HERV	ERV316A3	internal	chr1	164886625	164890264	+	noncoding	PBX1	protein_coding	SENSE	ENSG00000185630	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q23.3c	HERV	ERVLE	internal	chr1	165026955	165028586	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-755P	ENSG00000201270	46818	LMX1A	ENSG00000162761	173281	None	None
ERVLE_1q23.3d	HERV	ERVLE	oneside	chr1	165036150	165037695	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-755P	ENSG00000201270	56013	LMX1A	ENSG00000162761	164172	None	None
ERV316A3_1q24.1	HERV	ERV316A3	oneside	chr1	165815775	165818468	+	noncoding	TMCO1	protein_coding	ANTISENSE	ENSG00000143183	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_1q24.1a	HERV	MER4	prototype	chr1	166526766	166533515	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01675	ENSG00000234142	36459	FMO8P	ENSG00000238087	32663	None	None
MER4_1q24.1b	HERV	MER4	tandem*	chr1	166534022	166541928	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FMO8P	ENSG00000238087	24250	LINC01675	ENSG00000234142	43715	None	None
HML2_1q24.1	HERV	HML2	prototype	chr1	166605366	166611021	-	noncoding	FMO9P	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000215834	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1q24.1	HERV	ERVLB4	prototype	chr1	166658793	166662164	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FMO9P	ENSG00000215834	27393	FMO10P	ENSG00000234984	3721	None	None
ERVL_1q24.1	HERV	ERVL	oneside	chr1	166710004	166711617	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL4P2	ENSG00000232341	35762	FMO10P	ENSG00000234984	27808	None	None
ERVLE_1q24.1	HERV	ERVLE	internal	chr1	166815061	166815948	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CNN2P10	ENSG00000232223	17878	POGK	ENSG00000143157	23499	None	None
HML3_1q24.2	HERV	HML3	prototype	chr1	167317366	167323078	-	noncoding	POU2F1	protein_coding	ANTISENSE	ENSG00000143190	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
LTR25_1q24.2	HERV	LTR25	internal	chr1	167574342	167575357	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CREG1	ENSG00000143162	20537	AL031733.1	ENSG00000231029	16035	None	None
ERV316A3_1q24.2a	HERV	ERV316A3	oneside	chr1	167581655	167584948	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031733.1	ENSG00000231029	6444	CREG1	ENSG00000143162	27850	None	None
ERVLE_1q24.2	HERV	ERVLE	oneside	chr1	167732967	167735856	-	noncoding	MPZL1	protein_coding	ANTISENSE	ENSG00000197965	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_1q24.2	HERV	HARLEQUIN	prototype	chr1	167863091	167869903	+	coding	ADCY10	protein_coding	ANTISENSE	ENSG00000143199	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:167863573-167863607,chr1:167863652-167863662
HERVL18_1q24.2	HERV	HERVL18	prototype	chr1	168264241	168270932	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TBX19	ENSG00000143178	9945	RNU6-1310P	ENSG00000206880	760	None	None
MER34B_1q24.2	HERV	MER34B	oneside	chr1	168334088	168336708	+	noncoding	AL022100.1	transcribed_processed_pseudogene	SENSE	ENSG00000227722	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1q24.2b	HERV	ERV316A3	prototype	chr1	168434251	168436218	+	noncoding	AL023755.1	lncRNA	ANTISENSE	ENSG00000228697	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1q24.2	HERV	ERVLB4	internal	chr1	168929961	168932471	+	noncoding	AL135926.1,LINC00970	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000285622,ENSG00000203601	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_1q24.2	HERV	PABLA	oneside	chr1	169390639	169392119	-	noncoding	BLZF1	protein_coding	ANTISENSE	ENSG00000117475	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_1q24.2	HERV	HUERSP1	prototype	chr1	169437009	169440502	-	noncoding	CCDC181	protein_coding	SENSE	ENSG00000117477	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1q24.2	HERV	HERVH	prototype	chr1	169683070	169688724	+	noncoding	C1orf112	protein_coding	SENSE	ENSG00000000460	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:169683373-169683376
HUERSP3B_1q24.2	HERV	HUERSP3B	internal	chr1	169815820	169819626	-	noncoding	C1orf112	protein_coding	ANTISENSE	ENSG00000000460	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_1q24.2	HERV	MER41	oneside	chr1	169820022	169820957	-	noncoding	C1orf112	protein_coding	ANTISENSE	ENSG00000000460	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_1q24.2	HERV	MER4B	internal	chr1	170043147	170045765	+	coding	KIFAP3	protein_coding	ANTISENSE	ENSG00000075945	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1q24.3	HERV	ERVLB4	oneside	chr1	170936135	170942366	-	noncoding	BX284613.2,MROH9	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000231424,ENSG00000117501	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q24.3	HERV	ERVLE	internal	chr1	171125290	171125767	-	noncoding	BX284613.2	lncRNA	SENSE	ENSG00000231424	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_1q24.3a	HERV	MER61	prototype	chr1	171213837	171218786	-	noncoding	BX284613.2,AL021026.1	lncRNA,lncRNA	SENSE,SENSE	ENSG00000231424,ENSG00000225243	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:171214002-171214029
PRIMA4_1q24.3	HERV	PRIMA4	prototype	chr1	171290616	171298477	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FMO4	ENSG00000076258	15706	FMO1	ENSG00000010932	4638	None	None
HERV9_1q24.3	HERV	HERV9	prototype	chr1	171304883	171312917	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FMO1	ENSG00000010932	18905	FMO4	ENSG00000076258	1266	None	None
HARLEQUIN_1q24.3	HERV	HARLEQUIN	prototype	chr1	171600445	171606825	+	coding	MYOCOS	protein_coding	SENSE	ENSG00000283683	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1q24.3a	HERV	ERV316A3	prototype	chr1	171608720	171614720	-	noncoding	MYOCOS	protein_coding	ANTISENSE	ENSG00000283683	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_1q24.3b	HERV	MER61	prototype	chr1	172616179	172622331	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-693P	ENSG00000251943	2645	FASLG	ENSG00000117560	36772	None	None
HERVL_1q24.3	HERV	HERVL	oneside	chr1	172688069	172694055	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC25A38P1	ENSG00000229785	54505	FASLG	ENSG00000117560	21193	None	None
ERV316A3_1q24.3b	HERV	ERV316A3	internal	chr1	172696420	172696961	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC25A38P1	ENSG00000229785	51599	FASLG	ENSG00000117560	29544	None	None
MER101_1q24.3a	HERV	MER101	oneside	chr1	172795691	172799028	-	noncoding	AL031599.1	lncRNA	ANTISENSE	ENSG00000224228	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_1q24.3b	HERV	MER101	internal	chr1	172805530	172806444	-	noncoding	AL031599.1	lncRNA	ANTISENSE	ENSG00000224228	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_1q24.3	HERV	LTR19	internal	chr1	172847553	172851416	-	noncoding	AL031599.1	lncRNA	ANTISENSE	ENSG00000224228	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:172850839-172851198,chr1:172851285-172851447	chr1:172851371-172851383
ERVLB4_1q25.1a	HERV	ERVLB4	prototype	chr1	173021845	173024861	-	noncoding	AL031599.1	lncRNA	ANTISENSE	ENSG00000224228	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1q25.1b	HERV	ERVLB4	prototype	chr1	173333146	173340404	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TNFSF4	ENSG00000117586	125815	AL645568.3	ENSG00000232751	11285	None	None
HERV9_1q25.1	HERV	HERV9	mergeable*	chr1	173367863	173382451	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645568.2	ENSG00000231615	4130	AL645568.1	ENSG00000203739	35342	None	None
ERVLB4_1q25.1c	HERV	ERVLB4	prototype	chr1	173394422	173401736	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645568.2	ENSG00000231615	30689	AL645568.1	ENSG00000203739	16057	chr1:173401461-173401671	None
PABLA_1q25.1	HERV	PABLA	internal	chr1	173494263	173499851	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645568.1	ENSG00000203739	4856	SLC9C2	ENSG00000162753	609	None	None
MER4_1q25.1a	HERV	MER4	oneside	chr1	173674381	173676802	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KLHL20	ENSG00000076321	38139	ANKRD45	ENSG00000183831	4530	None	None
MER4_1q25.1b	HERV	MER4	internal	chr1	173676854	173678074	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KLHL20	ENSG00000076321	36867	ANKRD45	ENSG00000183831	7003	None	None
MER4_1q25.1c	HERV	MER4	internal	chr1	173681140	173682684	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KLHL20	ENSG00000076321	32257	ANKRD45	ENSG00000183831	11289	None	None
MER4_1q25.1d	HERV	MER4	oneside	chr1	173682724	173683771	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KLHL20	ENSG00000076321	31170	ANKRD45	ENSG00000183831	12873	None	None
HERVIP10FH_1q25.1	HERV	HERVIP10FH	oneside	chr1	173683772	173688508	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KLHL20	ENSG00000076321	26433	ANKRD45	ENSG00000183831	13921	None	None
HERVIP10F_1q25.1	HERV	HERVIP10F	oneside	chr1	173688627	173692249	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KLHL20	ENSG00000076321	22692	ANKRD45	ENSG00000183831	18776	None	None
ERVLE_1q25.1a	HERV	ERVLE	internal	chr1	174090544	174091600	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RABGAP1L-DT	ENSG00000227373	18668	RPL30P1	ENSG00000225713	70	None	None
ERVLE_1q25.1b	HERV	ERVLE	internal	chr1	174103464	174104840	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL30P1	ENSG00000225713	12990	RABGAP1L-DT	ENSG00000227373	5428	None	None
ERVLE_1q25.1c	HERV	ERVLE	internal	chr1	174108781	174109242	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL30P1	ENSG00000225713	18307	RABGAP1L-DT	ENSG00000227373	1026	None	None
MER61_1q25.1a	HERV	MER61	oneside	chr1	174297228	174299323	-	noncoding	RABGAP1L	protein_coding	ANTISENSE	ENSG00000152061	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_1q25.1b	HERV	MER61	internal	chr1	174299363	174300630	-	noncoding	RABGAP1L	protein_coding	ANTISENSE	ENSG00000152061	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1q25.1	HERV	HERVL	prototype	chr1	175242255	175248747	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL008626.1	ENSG00000230687	37406	RPS29P4	ENSG00000233946	48333	None	None
PRIMA41_1q25.1	HERV	PRIMA41	prototype	chr1	175269253	175277820	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL008626.1	ENSG00000230687	64404	RPS29P4	ENSG00000233946	19260	None	None
MER101_1q25.1a	HERV	MER101	oneside	chr1	175288743	175290176	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL008626.1	ENSG00000230687	83894	RPS29P4	ENSG00000233946	6904	None	None
MER101_1q25.1b	HERV	MER101	internal	chr1	175293411	175297047	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL008626.1	ENSG00000230687	88562	RPS29P4	ENSG00000233946	33	None	None
MER61_1q25.1c	HERV	MER61	prototype	chr1	176096003	176102384	+	noncoding	COP1	protein_coding	ANTISENSE	ENSG00000143207	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLB_1q25.2	HERV	PABLB	internal	chr1	176320885	176322922	-	noncoding	AL591043.2	lncRNA	ANTISENSE	ENSG00000236021	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1q25.2a	HERV	ERV316A3	internal	chr1	177291956	177294248	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01645	ENSG00000224968	57314	BRINP2	ENSG00000198797	9534	None	None
ERV316A3_1q25.2b	HERV	ERV316A3	oneside	chr1	177455894	177461782	-	noncoding	AL136114.1	lncRNA	SENSE	ENSG00000227579	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1q25.2	HERV	HERVH	prototype	chr1	178040241	178045930	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CRYZL2P-SEC16B	ENSG00000254154	2234	RASAL2-AS1	ENSG00000224687	44747	None	chr1:178040631-178040668
HERVW_1q25.2	HERV	HERVW	oneside	chr1	178141219	178143059	-	noncoding	RASAL2	protein_coding	ANTISENSE	ENSG00000075391	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1q25.2	HERV	HERVL	oneside	chr1	178199724	178204344	+	noncoding	RASAL2	protein_coding	SENSE	ENSG00000075391	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_1q25.2	HERV	HML3	prototype	chr1	178554076	178560481	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP69	ENSG00000201347	432	C1orf220	ENSG00000213057	5187	None	None
HML6_1q25.2	HERV	HML6	prototype	chr1	179437126	179443269	-	noncoding	AXDND1	protein_coding	ANTISENSE	ENSG00000162779	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1q25.2	HERV	ERVLB4	internal	chr1	179583981	179585324	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU5F-2P	ENSG00000251875	7632	AL160286.1	ENSG00000227141	1381	None	None
ERVLE_1q25.3a	HERV	ERVLE	internal	chr1	180553748	180556425	+	noncoding	OVAAL	lncRNA	SENSE	ENSG00000236719	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1q25.3a	HERV	ERV316A3	internal	chr1	180556453	180557450	+	noncoding	OVAAL	lncRNA	SENSE	ENSG00000236719	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q25.3b	HERV	ERVLE	internal	chr1	180621703	180622915	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	XPR1	ENSG00000143324	9107	OVAAL	ENSG00000236719	55180	None	None
ERVLE_1q25.3c	HERV	ERVLE	internal	chr1	180798452	180801349	-	noncoding	XPR1	protein_coding	ANTISENSE	ENSG00000143324	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1q25.3b	HERV	ERV316A3	internal	chr1	180893781	180896927	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	XPR1	ENSG00000143324	3502	LINC02816	ENSG00000225857	9724	None	None
HERVK11_1q25.3	HERV	HERVK11	prototype	chr1	181245995	181255232	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01699	ENSG00000179452	7391	CACNA1E	ENSG00000198216	62458	None	None
HERV9_1q25.3	HERV	HERV9	oneside	chr1	181829663	181833982	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161734.1	ENSG00000272880	16402	RN7SKP229	ENSG00000222397	5491	None	None
ERV316A3_1q25.3c	HERV	ERV316A3	internal	chr1	181996552	181997560	-	noncoding	AL391477.1	lncRNA	SENSE	ENSG00000287452	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1q25.3d	HERV	ERV316A3	oneside	chr1	181997613	181999203	-	noncoding	AL391477.1	lncRNA	SENSE	ENSG00000287452	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:181998983-181998987
MER61_1q25.3	HERV	MER61	oneside	chr1	182035067	182039796	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF648	ENSG00000179930	14774	AL391477.1	ENSG00000287452	36082	None	None
ERV316A3_1q25.3e	HERV	ERV316A3	internal	chr1	182255484	182256369	-	noncoding	LINC01344	lncRNA	SENSE	ENSG00000228918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q25.3d	HERV	ERVLE	internal	chr1	182409302	182411144	+	noncoding	LINC00272,RGSL1	lncRNA,protein_coding	SENSE,SENSE	ENSG00000203729,ENSG00000121446	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1q25.3f	HERV	ERV316A3	internal	chr1	182494569	182497220	-	noncoding	RGSL1	protein_coding	ANTISENSE	ENSG00000121446	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_1q25.3	HERV	HUERSP2	prototype	chr1	182512395	182516340	-	noncoding	RGSL1	protein_coding	ANTISENSE	ENSG00000121446	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q25.3e	HERV	ERVLE	internal	chr1	182995614	183001083	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LAMC1	ENSG00000135862	22337	RNU6-41P	ENSG00000207472	13296	None	None
HERVH_1q25.3	HERV	HERVH	prototype	chr1	183613210	183619373	+	noncoding	AL137800.1	lncRNA	SENSE	ENSG00000286966	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH48_1q25.3	HERV	HERVH48	prototype	chr1	183702773	183709310	-	coding	RGL1,AL157899.1	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000143344,ENSG00000270994	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q25.3f	HERV	ERVLE	internal	chr1	184258841	184259708	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445228.1	ENSG00000207080	55950	AL158011.1	ENSG00000199840	87018	None	None
HERVL18_1q25.3	HERV	HERVL18	prototype	chr1	184287074	184290618	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158011.1	ENSG00000199840	115251	AL445228.1	ENSG00000207080	25040	None	None
MER41_1q25.3	HERV	MER41	internal	chr1	184811820	184812915	+	noncoding	NIBAN1	protein_coding	ANTISENSE	ENSG00000135842	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q25.3g	HERV	ERVLE	internal	chr1	185116817	185118090	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNF2	ENSG00000121481	14214	TRMT1L	ENSG00000121486	11	None	None
ERVLE_1q25.3h	HERV	ERVLE	internal	chr1	185499736	185501896	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133383.4	ENSG00000279401	16755	MCRIP2P2	ENSG00000270920	63689	None	None
HML5_1q25.3	HERV	HML5	prototype	chr1	185581069	185586238	-	noncoding	LINC01350	lncRNA	SENSE	ENSG00000228309	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_1q31.1a	HERV	HERVH	prototype	chr1	185948279	185954216	-	noncoding	HMCN1	protein_coding	ANTISENSE	ENSG00000143341	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_1q31.1	HERV	MER41	oneside	chr1	186223611	186228279	+	coding	AL133553.2	lncRNA	SENSE	ENSG00000288078	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PRIMAX_1q31.1a	HERV	PRIMAX	internal	chr1	186516009	186518615	+	noncoding	AL096803.2	lncRNA	SENSE	ENSG00000229739	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:186517847-186517850
PRIMAX_1q31.1b	HERV	PRIMAX	internal	chr1	186608020	186611760	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049198.1	ENSG00000288562	12940	AL096803.3	ENSG00000233196	26829	chr1:186611216-186611485	None
HERVEA_1q31.1	HERV	HERVEA	prototype	chr1	186914372	186923133	-	coding	PLA2G4A	protein_coding	ANTISENSE	ENSG00000116711	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:186922776-186922784
PABLA_1q31.1	HERV	PABLA	prototype	chr1	187002870	187010252	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PLA2G4A	ENSG00000116711	13889	ERVMER61-1	ENSG00000230426	60448	chr1:187006701-187006946	None
ERVLE_1q31.1a	HERV	ERVLE	internal	chr1	187166788	187168794	+	noncoding	ERVMER61-1	lncRNA	SENSE	ENSG00000230426	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_1q31.1	HERV	MER4	prototype	chr1	187468808	187471048	+	noncoding	ERVMER61-1	lncRNA	SENSE	ENSG00000230426	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_1q31.1	HERV	HERVIP10F	oneside	chr1	187630702	187632130	+	noncoding	ERVMER61-1	lncRNA	SENSE	ENSG00000230426	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:187630660-187631072	chr1:187631059-187631073,chr1:187630660-187630705
MER61_1q31.1a	HERV	MER61	oneside	chr1	187641124	187643633	+	noncoding	ERVMER61-1	lncRNA	SENSE	ENSG00000230426	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:187641278-187641293
HERVH_1q31.1b	HERV	HERVH	prototype	chr1	187765509	187770901	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136372.2	ENSG00000285894	242741	AL645474.1	ENSG00000223847	50774	None	None
ERVLE_1q31.1b	HERV	ERVLE	internal	chr1	187874870	187876362	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136372.2	ENSG00000285894	137280	AL645474.1	ENSG00000223847	160135	None	None
MER101_1q31.1	HERV	MER101	internal	chr1	188099863	188100570	+	noncoding	AL136372.2	lncRNA	SENSE	ENSG00000285894	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1q31.1a	HERV	HERVL	prototype	chr1	188335018	188342121	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL929288.1	ENSG00000225006	166417	AL592447.1	ENSG00000224278	92340	None	None
PRIMAX_1q31.1c	HERV	PRIMAX	internal	chr1	188455206	188456155	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL592447.1	ENSG00000224278	212528	AL929288.1	ENSG00000225006	52383	None	None
HERVL_1q31.1b	HERV	HERVL	oneside	chr1	188523084	188524793	+	noncoding	AL929288.1	lncRNA	SENSE	ENSG00000225006	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1q31.1c	HERV	HERVL	prototype	chr1	188606879	188613573	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL929288.1	ENSG00000225006	70414	AL929288.2	ENSG00000235083	57780	None	None
HERV4_1q31.1	HERV	HERV4	oneside	chr1	188665717	188670149	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL929288.1	ENSG00000225006	129252	AL929288.2	ENSG00000235083	1204	chr1:188669286-188669304	None
HERVL_1q31.1d	HERV	HERVL	oneside	chr1	188729728	188732432	-	noncoding	AL691515.1	lncRNA	SENSE	ENSG00000237283	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1q31.1	HERV	ERV316A3	internal	chr1	188758546	188760145	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL691515.1	ENSG00000237283	26338	AL691515.2	ENSG00000238054	109329	None	None
ERVLE_1q31.1c	HERV	ERVLE	internal	chr1	188940147	188940786	-	noncoding	LINC01035	lncRNA	ANTISENSE	ENSG00000226486	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1q31.1e	HERV	HERVL	prototype	chr1	189167443	189174237	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP75	ENSG00000226196	34151	RNA5SP73	ENSG00000252553	491912	None	chr1:189172787-189172798,chr1:189174143-189174145
LTR25_1q31.1	HERV	LTR25	internal	chr1	189269130	189270998	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP73	ENSG00000252553	395151	GAPDHP75	ENSG00000226196	135838	None	None
ERVLE_1q31.1d	HERV	ERVLE	internal	chr1	189429879	189431426	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP75	ENSG00000226196	296587	RNA5SP73	ENSG00000252553	234723	None	None
ERVLE_1q31.1e	HERV	ERVLE	internal	chr1	189778869	189780533	+	noncoding	LINC01701	lncRNA	SENSE	ENSG00000232212	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q31.1f	HERV	ERVLE	internal	chr1	189872819	189876155	+	noncoding	AL591504.2	lncRNA	SENSE	ENSG00000287472	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q31.1g	HERV	ERVLE	internal	chr1	189876676	189877546	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591504.2	ENSG00000287472	516	AL359976.1	ENSG00000230987	112024	None	None
MER61_1q31.1b	HERV	MER61	oneside	chr1	190083768	190085109	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359976.1	ENSG00000230987	90671	BRINP3	ENSG00000162670	12549	None	None
LTR57_1q31.1	HERV	LTR57	internal	chr1	190593261	190594244	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL391645.1	ENSG00000241505	98964	LINC01720	ENSG00000231175	30646	None	None
HERVL_1q31.1f	HERV	HERVL	prototype	chr1	190669150	190675533	-	noncoding	LINC01720	lncRNA	ANTISENSE	ENSG00000231175	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_1q31.2	HERV	MER4B	internal	chr1	191152465	191155164	+	coding	AL713866.1	lncRNA	SENSE	ENSG00000261642	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_1q31.2	HERV	MER4	internal	chr1	191155338	191156075	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL713866.1	ENSG00000261642	704	AL713866.2	ENSG00000271187	23446	None	None
HERVL_1q31.2a	HERV	HERVL	prototype	chr1	191234151	191240770	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01680	ENSG00000233882	5684	LINC02770	ENSG00000228215	582662	None	None
HERVL_1q31.2b	HERV	HERVL	prototype	chr1	191825119	191828989	-	noncoding	LINC02770	lncRNA	ANTISENSE	ENSG00000228215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1q31.2a	HERV	ERV316A3	oneside	chr1	192224564	192227876	+	noncoding	AL390957.1	lncRNA	ANTISENSE	ENSG00000285280	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1q31.2b	HERV	ERV316A3	oneside	chr1	192237925	192238996	+	noncoding	AL390957.1	lncRNA	ANTISENSE	ENSG00000285280	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_1q31.2	HERV	HERVH	prototype	chr1	192978517	192980540	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF101P2	ENSG00000234473	12909	AL390957.1	ENSG00000285280	20804	None	None
HERVL_1q31.2c	HERV	HERVL	oneside	chr1	193375087	193382172	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138778.1	ENSG00000286285	75250	LINC01031	ENSG00000232077	9134	None	None
HERVL_1q31.2d	HERV	HERVL	oneside	chr1	193382237	193383945	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138778.1	ENSG00000286285	73477	LINC01031	ENSG00000232077	16284	None	None
ERVLB4_1q31.2	HERV	ERVLB4	oneside	chr1	193439010	193444016	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01031	ENSG00000232077	73057	AL138778.1	ENSG00000286285	13406	None	None
ERV316A3_1q31.3a	HERV	ERV316A3	oneside	chr1	194296403	194298175	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL513348.1	ENSG00000231714	52768	AL136456.1	ENSG00000227240	97695	None	None
ERVL_1q31.3	HERV	ERVL	internal	chr1	194469197	194469879	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-983P	ENSG00000251813	18224	AL513348.1	ENSG00000231714	116771	None	None
ERVLE_1q31.3a	HERV	ERVLE	internal	chr1	194621196	194622866	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353072.1	ENSG00000228167	95929	RNU6-983P	ENSG00000251813	132991	None	None
ERVLE_1q31.3b	HERV	ERVLE	internal	chr1	194739850	194741059	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353072.1	ENSG00000228167	20614	AL353072.2	ENSG00000285718	44458	None	None
HERVL_1q31.3a	HERV	HERVL	oneside	chr1	194762056	194766280	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353072.2	ENSG00000285718	19237	AL353072.1	ENSG00000228167	42820	None	None
ERV316A3_1q31.3b	HERV	ERV316A3	oneside	chr1	194841597	194843308	+	noncoding	AL353072.2	lncRNA	ANTISENSE	ENSG00000285718	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1q31.3b	HERV	HERVL	oneside	chr1	194920808	194926747	+	noncoding	AL353072.2	lncRNA	ANTISENSE	ENSG00000285718	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q31.3c	HERV	ERVLE	prototype	chr1	195002756	195006066	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353709.1	ENSG00000287364	740958	AL353072.2	ENSG00000285718	71446	None	None
ERVLE_1q31.3d	HERV	ERVLE	internal	chr1	195125248	195126556	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353709.1	ENSG00000287364	620468	AL353072.2	ENSG00000285718	193938	None	None
ERVLE_1q31.3e	HERV	ERVLE	internal	chr1	195215097	195215763	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353072.2	ENSG00000285718	283787	AL353709.1	ENSG00000287364	531261	None	None
ERVLB4_1q31.3a	HERV	ERVLB4	oneside	chr1	195250239	195253558	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353072.2	ENSG00000285718	318929	AL353709.1	ENSG00000287364	493466	None	None
ERV316A3_1q31.3c	HERV	ERV316A3	internal	chr1	195399313	195401185	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353072.2	ENSG00000285718	468003	AL353709.1	ENSG00000287364	345839	None	None
ERVLE_1q31.3f	HERV	ERVLE	internal	chr1	195417807	195419541	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353709.1	ENSG00000287364	327483	AL353072.2	ENSG00000285718	486497	None	None
MER61_1q31.3	HERV	MER61	prototype	chr1	195481270	195486306	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353709.1	ENSG00000287364	260718	AL353072.2	ENSG00000285718	549960	None	None
ERV316A3_1q31.3d	HERV	ERV316A3	internal	chr1	195659613	195660588	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353709.1	ENSG00000287364	86436	AL353072.2	ENSG00000285718	728303	None	None
HERVFRD_1q31.3	HERV	HERVFRD	prototype	chr1	195732186	195739152	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353072.2	ENSG00000285718	800876	AL353709.1	ENSG00000287364	7872	None	None
HERVL_1q31.3c	HERV	HERVL	prototype	chr1	195998347	196002028	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353709.1	ENSG00000287364	234846	LINC01724	ENSG00000227421	42855	None	None
ERVLB4_1q31.3b	HERV	ERVLB4	oneside	chr1	196030125	196033045	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01724	ENSG00000227421	11838	AL353709.1	ENSG00000287364	266624	None	None
HUERSP3B_1q31.3	HERV	HUERSP3B	oneside	chr1	196139221	196141249	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCNT2	ENSG00000162687	84530	LINC01724	ENSG00000227421	73986	None	None
HERVL_1q31.3d	HERV	HERVL	prototype	chr1	196162667	196164703	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01724	ENSG00000227421	97432	KCNT2	ENSG00000162687	61076	None	None
HERVL18_1q31.3	HERV	HERVL18	prototype	chr1	196535611	196538758	-	noncoding	KCNT2	protein_coding	SENSE	ENSG00000162687	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLB_1q31.3a	HERV	PABLB	internal	chr1	196702571	196707633	+	noncoding	CFH	protein_coding	SENSE	ENSG00000000971	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_1q31.3	HERV	HUERSP1	internal	chr1	196867358	196868407	+	noncoding	BX248415.1	unprocessed_pseudogene	SENSE	ENSG00000285986	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLB_1q31.3b	HERV	PABLB	internal	chr1	196869192	196873668	+	noncoding	BX248415.1	unprocessed_pseudogene	SENSE	ENSG00000285986	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_1q31.3	HERV	MER4B	internal	chr1	197012984	197015240	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CFHR5	ENSG00000134389	3306	F13B	ENSG00000143278	23501	None	None
ERVLE_1q31.3g	HERV	ERVLE	internal	chr1	197148583	197153401	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ASPM	ENSG00000066279	1889	ZBTB41	ENSG00000177888	279	None	None
ERV316A3_1q31.3e	HERV	ERV316A3	unknown	chr1	197231408	197235276	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL513325.1	ENSG00000237861	8153	CRB1	ENSG00000134376	32928	None	None
HERVL40_1q31.3	HERV	HERVL40	prototype	chr1	197371543	197375581	-	noncoding	CRB1	protein_coding	ANTISENSE	ENSG00000134376	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q31.3h	HERV	ERVLE	internal	chr1	197861389	197863040	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DENND1B	ENSG00000213047	85693	C1orf53	ENSG00000203724	39590	None	None
HERVH_1q31.3	HERV	HERVH	prototype	chr1	198034651	198040990	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LHX9	ENSG00000143355	99173	NEK7	ENSG00000151414	116004	None	None
ERVLB4_1q31.3c	HERV	ERVLB4	oneside	chr1	198060648	198062536	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NEK7	ENSG00000151414	94458	LHX9	ENSG00000143355	125170	None	None
ERVLE_1q31.3i	HERV	ERVLE	internal	chr1	198353352	198354312	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NEK7	ENSG00000151414	30932	AL450352.1	ENSG00000287989	96354	None	None
HUERSP2_1q32.1	HERV	HUERSP2	prototype	chr1	198827111	198831700	-	noncoding	MIR181A1HG	lncRNA	SENSE	ENSG00000229989	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:198827693-198827699
ERVLE_1q32.1a	HERV	ERVLE	internal	chr1	198976614	198978350	+	noncoding	AC096631.1	lncRNA	SENSE	ENSG00000225172	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_1q32.1	HERV	HERVL74	oneside	chr1	199114304	199116964	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105941.1	ENSG00000286541	33329	LINC02789	ENSG00000231718	31634	None	None
ERV316A3_1q32.1a	HERV	ERV316A3	internal	chr1	199358701	199359381	-	noncoding	LINC02789	lncRNA	ANTISENSE	ENSG00000231718	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1q32.1	HERV	ERVLB4	internal	chr1	199480552	199481782	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL596266.1	ENSG00000231984	270709	LINC02789	ENSG00000231718	87245	None	None
ERV316A3_1q32.1b	HERV	ERV316A3	oneside	chr1	199544712	199548341	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02789	ENSG00000231718	151405	AL596266.1	ENSG00000231984	204150	None	None
HML5_1q32.1	HERV	HML5	prototype	chr1	203426863	203429582	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRELP	ENSG00000188783	46224	LARP7P1	ENSG00000271588	26282	None	chr1:203429176-203429197,chr1:203429240-203429253,chr1:203429215-203429218
HERVL_1q32.1	HERV	HERVL	prototype	chr1	204234573	204241173	+	coding	PLEKHA6	protein_coding	ANTISENSE	ENSG00000143850	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q32.1b	HERV	ERVLE	internal	chr1	204596576	204597643	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP74	ENSG00000200408	34055	AL512306.3	ENSG00000240710	5392	None	None
ERVLE_1q32.1c	HERV	ERVLE	internal	chr1	204753218	204756874	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161793.2	ENSG00000251861	25112	AC096675.1	ENSG00000287197	65790	None	None
ERVLE_1q32.1d	HERV	ERVLE	internal	chr1	204774535	204780139	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096675.1	ENSG00000287197	42525	AL161793.2	ENSG00000251861	46429	None	None
HML3_1q32.1a	HERV	HML3	oneside	chr1	205776764	205778085	-	noncoding	AC119673.2	lncRNA	ANTISENSE	ENSG00000285521	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_1q32.1	HERV	HML1	oneside	chr1	205857564	205862572	+	noncoding	AC119673.3	lncRNA	SENSE	ENSG00000286619	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:205857988-205857995,chr1:205858040-205858046
HERVK14C_1q32.1	HERV	HERVK14C	internal	chr1	205862751	205864227	+	noncoding	AC119673.3	lncRNA	SENSE	ENSG00000286619	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVW_1q32.1	HERV	HERVW	oneside	chr1	205866332	205871494	-	noncoding	AC119673.3	lncRNA	ANTISENSE	ENSG00000286619	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_1q32.1a	HERV	HERVH	oneside	chr1	205871746	205875092	+	noncoding	AC119673.3	lncRNA	SENSE	ENSG00000286619	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1q32.1b	HERV	HERVH	prototype	chr1	205884573	205890424	-	noncoding	AC119673.3	lncRNA	ANTISENSE	ENSG00000286619	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_1q32.1b	HERV	HML3	prototype	chr1	205890691	205896160	+	noncoding	AC119673.3	lncRNA	SENSE	ENSG00000286619	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_1q32.1	HERV	HARLEQUIN	prototype	chr1	206052519	206058912	+	coding	BX571818.1,RHEX	transcribed_unitary_pseudogene,protein_coding	SENSE,SENSE	ENSG00000285417,ENSG00000263961	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:206053166-206053183
ERVLE_1q32.1e	HERV	ERVLE	internal	chr1	206809925	206813122	+	noncoding	IL19	protein_coding	SENSE	ENSG00000142224	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1q32.1c	HERV	ERV316A3	internal	chr1	206973325	206977103	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C1orf116	ENSG00000182795	41419	FCAMR	ENSG00000162897	2700	None	None
ERVLE_1q32.2a	HERV	ERVLE	oneside	chr1	207118838	207120476	-	noncoding	C4BPA	protein_coding	ANTISENSE	ENSG00000123838	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1q32.2a	HERV	ERV316A3	internal	chr1	207135436	207140442	-	noncoding	C4BPA	protein_coding	ANTISENSE	ENSG00000123838	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_1q32.2	HERV	HERV3	oneside	chr1	207219802	207221337	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445493.2	ENSG00000243636	35740	C4BPAP2	ENSG00000232621	4461	None	None
ERVLE_1q32.2b	HERV	ERVLE	internal	chr1	207417758	207418534	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL391597.1	ENSG00000283044	1522	CR2	ENSG00000117322	35696	None	None
HERVL18_1q32.2	HERV	HERVL18	prototype	chr1	207420882	207425638	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CR2	ENSG00000117322	28592	AL391597.1	ENSG00000283044	4646	chr1:207423583-207423685,chr1:207424708-207424922	None
ERVLE_1q32.2c	HERV	ERVLE	internal	chr1	207426048	207427383	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL391597.1	ENSG00000283044	9812	CR2	ENSG00000117322	26847	None	None
ERVLE_1q32.2d	HERV	ERVLE	internal	chr1	207512891	207513462	-	noncoding	CR1	protein_coding	ANTISENSE	ENSG00000203710	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_1q32.2	HERV	HML2	oneside	chr1	207635112	207639291	-	noncoding	CR1	protein_coding	ANTISENSE	ENSG00000203710	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q32.2e	HERV	ERVLE	internal	chr1	207685206	207685768	-	noncoding	CR1L	protein_coding	ANTISENSE	ENSG00000197721	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_1q32.2	HERV	HUERSP3B	prototype	chr1	207741921	207748554	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CR1L	ENSG00000197721	3505	CD46	ENSG00000117335	3503	chr1:207748082-207748360	None
ERV316A3_1q32.2b	HERV	ERV316A3	oneside	chr1	208984563	208986825	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104465.1	ENSG00000278684	14513	LINC01774	ENSG00000236950	9256	None	None
ERV316A3_1q32.2c	HERV	ERV316A3	oneside	chr1	209283261	209286159	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01696	ENSG00000227940	39233	ATP5MC2P1	ENSG00000225712	15038	None	None
ERV316A3_1q32.2d	HERV	ERV316A3	oneside	chr1	209444886	209448546	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL023754.1	ENSG00000224260	79909	MIR205HG	ENSG00000230937	12048	None	None
HERVH_1q32.2a	HERV	HERVH	prototype	chr1	209448805	209454002	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR205HG	ENSG00000230937	15967	AL023754.1	ENSG00000224260	74453	None	None
ERV316A3_1q32.2e	HERV	ERV316A3	oneside	chr1	209910312	209913183	+	noncoding	SYT14	protein_coding	SENSE	ENSG00000143469	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1q32.2a	HERV	ERVLB4	internal	chr1	210082257	210084881	-	noncoding	SYT14	protein_coding	ANTISENSE	ENSG00000143469	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1q32.2b	HERV	HERVH	prototype	chr1	210111090	210116207	-	noncoding	SYT14	protein_coding	ANTISENSE	ENSG00000143469	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1q32.2c	HERV	HERVH	prototype	chr1	210187604	210195678	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SYT14	ENSG00000143469	16215	SERTAD4-AS1	ENSG00000203706	35778	None	None
ERVLB4_1q32.2b	HERV	ERVLB4	internal	chr1	210436679	210440818	-	noncoding	HHAT	protein_coding	ANTISENSE	ENSG00000054392	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:210439581-210439589,chr1:210439650-210439665
HERVK11_1q32.3	HERV	HERVK11	oneside	chr1	211398720	211400825	+	noncoding	LINC00467	lncRNA	SENSE	ENSG00000153363	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_1q32.3	HERV	HARLEQUIN	prototype	chr1	211687055	211694581	+	coding	AC096637.3	lncRNA	SENSE	ENSG00000231057	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_1q32.3	HERV	MER41	prototype	chr1	211706726	211711267	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096637.3	ENSG00000231057	16623	AC096637.2	ENSG00000226868	4661	None	None
HERVW_1q32.3a	HERV	HERVW	oneside	chr1	211855798	211857873	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092814.2	ENSG00000233626	78376	LPGAT1-AS1	ENSG00000229258	2095	None	None
HERVW_1q32.3b	HERV	HERVW	internal	chr1	211857874	211858921	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LPGAT1-AS1	ENSG00000229258	4171	AC092814.2	ENSG00000233626	77328	None	None
ERV316A3_1q32.3a	HERV	ERV316A3	internal	chr1	212131798	212132463	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DTL	ENSG00000143476	24398	AL606468.1	ENSG00000229983	35744	None	None
ERV316A3_1q32.3b	HERV	ERV316A3	oneside	chr1	212138300	212139424	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DTL	ENSG00000143476	30900	AL606468.1	ENSG00000229983	28783	chr1:212138617-212138762	None
PRIMA41_1q32.3	HERV	PRIMA41	oneside	chr1	212422529	212431617	+	noncoding	AC092803.3	lncRNA	ANTISENSE	ENSG00000287445	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_1q32.3a	HERV	HERVH	oneside	chr1	212843811	212846806	+	noncoding	SPATA45	protein_coding	ANTISENSE	ENSG00000185523	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1q32.3b	HERV	HERVH	prototype	chr1	212910008	212914681	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FLVCR1	ENSG00000162769	10645	AC104333.4	ENSG00000282718	2106	None	chr1:212910350-212910356
ERVLE_1q32.3	HERV	ERVLE	internal	chr1	212934788	212938148	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VASH2	ENSG00000143494	12372	AC104333.4	ENSG00000282718	17211	chr1:212934874-212934969	chr1:212935551-212935578
HML3_1q32.3a	HERV	HML3	oneside	chr1	213025489	213031102	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS6KC1	ENSG00000136643	20131	ANGEL2	ENSG00000174606	9622	None	None
HML3_1q32.3b	HERV	HML3	oneside	chr1	213031167	213032441	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS6KC1	ENSG00000136643	18792	ANGEL2	ENSG00000174606	15300	None	None
ERV316A3_1q32.3c	HERV	ERV316A3	prototype	chr1	213590410	213592098	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096639.1	ENSG00000228255	139318	AL592402.1	ENSG00000225233	11143	None	None
ERV316A3_1q41a	HERV	ERV316A3	oneside	chr1	214585874	214590346	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CENPF	ENSG00000117724	12849	PTPN14	ENSG00000152104	33425	None	None
ERVLE_1q41a	HERV	ERVLE	internal	chr1	214758239	214758813	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP24	ENSG00000185221	111921	CENPF	ENSG00000117724	93668	None	None
ERVLE_1q41b	HERV	ERVLE	internal	chr1	214789777	214792645	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP24	ENSG00000185221	78089	CENPF	ENSG00000117724	125206	None	None
ERVLE_1q41c	HERV	ERVLE	internal	chr1	214878764	214883538	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC099563.1	ENSG00000223869	59585	GAPDHP24	ENSG00000185221	7048	None	None
ERV316A3_1q41b	HERV	ERV316A3	prototype	chr1	215248392	215250212	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VDAC1P10	ENSG00000232809	126272	KCNK2	ENSG00000082482	11299	None	None
ERVLE_1q41d	HERV	ERVLE	internal	chr1	215261600	215269127	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VDAC1P10	ENSG00000232809	107357	KCNK2	ENSG00000082482	24507	None	None
ERVLE_1q41e	HERV	ERVLE	internal	chr1	215358809	215360872	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCNK2	ENSG00000082482	121716	VDAC1P10	ENSG00000232809	15612	None	None
HERVH_1q41a	HERV	HERVH	prototype	chr1	215410117	215415683	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCTD3	ENSG00000136636	151621	AL450990.1	ENSG00000282265	15699	None	None
LTR57_1q41	HERV	LTR57	oneside	chr1	215538917	215540507	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCTD3	ENSG00000136636	26797	AL450990.1	ENSG00000282265	144499	None	None
MER41_1q41a	HERV	MER41	prototype	chr1	215583131	215585190	-	noncoding	KCTD3	protein_coding	ANTISENSE	ENSG00000136636	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1q41b	HERV	HERVH	prototype	chr1	216008143	216013869	+	noncoding	USH2A	protein_coding	ANTISENSE	ENSG00000042781	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1q41c	HERV	HERVH	prototype	chr1	216145601	216152688	+	noncoding	USH2A	protein_coding	ANTISENSE	ENSG00000042781	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1q41c	HERV	ERV316A3	oneside	chr1	216193885	216195860	+	noncoding	USH2A,AC138024.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000042781,ENSG00000236292	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_1q41b	HERV	MER41	prototype	chr1	216343947	216349846	+	noncoding	USH2A	protein_coding	ANTISENSE	ENSG00000042781	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_1q41	HERV	PRIMA41	prototype	chr1	216480766	216484870	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	USH2A	ENSG00000042781	57318	ESRRG	ENSG00000196482	18376	None	None
ERVLE_1q41f	HERV	ERVLE	internal	chr1	217233383	217237669	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ESRRG	ENSG00000196482	95628	GPATCH2	ENSG00000092978	189323	None	None
ERVLB4_1q41a	HERV	ERVLB4	oneside	chr1	217310053	217316028	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ESRRG	ENSG00000196482	172298	GPATCH2	ENSG00000092978	110964	None	None
MER4_1q41a	HERV	MER4	oneside	chr1	218007367	218009084	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00210	ENSG00000231814	86563	AL355526.1	ENSG00000230714	22751	None	None
MER4_1q41b	HERV	MER4	oneside	chr1	218015314	218023674	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00210	ENSG00000231814	94510	AL355526.1	ENSG00000230714	8161	None	None
ERVLE_1q41g	HERV	ERVLE	oneside	chr1	218469519	218471099	+	noncoding	C1orf143	lncRNA	SENSE	ENSG00000228208	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1q41d	HERV	HERVH	oneside	chr1	218594310	218600065	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NXNP1	ENSG00000226693	281535	AC092015.1	ENSG00000212610	52411	None	None
HERVEA_1q41	HERV	HERVEA	prototype	chr1	218748962	218755422	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NXNP1	ENSG00000226693	126178	AC092015.1	ENSG00000212610	207063	None	None
HERVL40_1q41	HERV	HERVL40	internal	chr1	219218772	219223420	-	noncoding	AL360093.1	lncRNA	SENSE	ENSG00000223842	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q41h	HERV	ERVLE	internal	chr1	219319779	219320433	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LYPLAL1-AS1	ENSG00000228536	88606	AC096642.2	ENSG00000287676	22111	None	None
MER34B_1q41	HERV	MER34B	internal	chr1	219390975	219392351	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096642.2	ENSG00000287676	93307	LYPLAL1-AS1	ENSG00000228536	16688	None	None
ERVLE_1q41i	HERV	ERVLE	internal	chr1	219861925	219863570	+	noncoding	SLC30A10	protein_coding	ANTISENSE	ENSG00000196660	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q41j	HERV	ERVLE	internal	chr1	220360232	220361591	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL451081.1	ENSG00000226927	49	AC096644.3	ENSG00000260505	39531	None	None
ERVL_1q41	HERV	ERVL	internal	chr1	220551443	220555214	-	noncoding	MARK1	protein_coding	ANTISENSE	ENSG00000116141	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_1q41c	HERV	MER4	oneside	chr1	220716061	220717659	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C1orf115	ENSG00000162817	16908	MARC2	ENSG00000117791	30566	None	None
HARLEQUIN_1q41	HERV	HARLEQUIN	oneside	chr1	220718008	220722869	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C1orf115	ENSG00000162817	18855	MARC2	ENSG00000117791	25356	None	chr1:220718268-220718271,chr1:220718391-220718402
ERVLE_1q41k	HERV	ERVLE	internal	chr1	220953358	220954790	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HLX	ENSG00000136630	68299	AL445466.1	ENSG00000226211	179075	None	None
ERVLE_1q41l	HERV	ERVLE	internal	chr1	221217954	221219708	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445466.1	ENSG00000226211	83733	LINC02817	ENSG00000234754	110372	None	None
ERVLB4_1q41b	HERV	ERVLB4	prototype	chr1	221316978	221319839	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445466.1	ENSG00000226211	182757	LINC02817	ENSG00000234754	10241	None	None
ERV316A3_1q41d	HERV	ERV316A3	oneside	chr1	221595403	221598541	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DUSP10	ENSG00000143507	102883	AL360013.4	ENSG00000286421	31750	None	None
ERVLE_1q41m	HERV	ERVLE	oneside	chr1	221693912	221698681	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL360013.4	ENSG00000286421	130259	DUSP10	ENSG00000143507	2743	chr1:221696555-221696915	None
HERVH_1q41e	HERV	HERVH	oneside	chr1	221947781	221952102	+	noncoding	LINC02257	lncRNA	ANTISENSE	ENSG00000238042	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR23_1q41	HERV	LTR23	internal	chr1	221958153	221960186	-	noncoding	LINC02257	lncRNA	SENSE	ENSG00000238042	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:221958527-221958532
HERVH_1q41f	HERV	HERVH	prototype	chr1	221965924	221971633	+	noncoding	LINC02257,LINC02474	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000238042,ENSG00000228437	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr1:221969421-221969577,chr1:221971260-221971615	None
HERVH_1q41g	HERV	HERVH	prototype	chr1	221973078	221978957	-	noncoding	LINC02257,LINC02474	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000238042,ENSG00000228437	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1q41e	HERV	ERV316A3	prototype	chr1	222288336	222293533	+	noncoding	AL356108.1	lncRNA	ANTISENSE	ENSG00000236230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:222288090-222288382	None
HML6_1q41	HERV	HML6	prototype	chr1	222916841	222919617	+	noncoding	AC093152.1,DISP1	lncRNA,protein_coding	SENSE,SENSE	ENSG00000278610,ENSG00000154309	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1q41h	HERV	HERVH	prototype	chr1	223024396	223030156	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL929091.1	ENSG00000287338	61716	DISP1	ENSG00000154309	18401	None	chr1:223025158-223025177,chr1:223029109-223029113,chr1:223029169-223029173
HERVP71A_1q41	HERV	HERVP71A	oneside	chr1	223207049	223210084	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359979.1	ENSG00000226601	18895	SUSD4	ENSG00000143502	10735	None	None
ERV316A3_1q42.12a	HERV	ERV316A3	oneside	chr1	224762700	224763526	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02813	ENSG00000225334	2798	CNIH3	ENSG00000143786	22146	None	None
HERVH_1q42.12a	HERV	HERVH	prototype	chr1	224839936	224846082	-	noncoding	AL391811.1	lncRNA	SENSE	ENSG00000286719	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1q42.12b	HERV	HERVH	prototype	chr1	224885458	224893550	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL391811.1	ENSG00000286719	4103	DNAH14	ENSG00000185842	2712	None	None
HML5_1q42.12	HERV	HML5	prototype	chr1	225221660	225229271	+	noncoding	DNAH14	protein_coding	SENSE	ENSG00000185842	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1q42.12	HERV	ERVLB4	internal	chr1	225248755	225249390	+	noncoding	DNAH14	protein_coding	SENSE	ENSG00000185842	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1q42.12b	HERV	ERV316A3	prototype	chr1	225716020	225725256	+	noncoding	AC099066.2,AC099066.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000227496,ENSG00000226349	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:225716063-225716069
HML1_1q42.12	HERV	HML1	prototype	chr1	225791551	225801391	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099066.3	ENSG00000234112	1757	SRP9	ENSG00000143742	1083	None	None
ERVLE_1q42.12a	HERV	ERVLE	internal	chr1	226085781	226087362	-	noncoding	LINC01703	lncRNA	ANTISENSE	ENSG00000225518	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q42.12b	HERV	ERVLE	internal	chr1	226357508	226358354	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PARP1	ENSG00000143799	2337	AL359742.1	ENSG00000275406	23853	None	None
HUERSP3_1q42.12	HERV	HUERSP3	prototype	chr1	226491405	226494787	-	coding	CDKN2AIPNLP1	processed_pseudogene	SENSE	ENSG00000177770	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL66_1q42.12	HERV	HERVL66	prototype	chr1	226535600	226543018	-	coding	AL359704.3	lncRNA	SENSE	ENSG00000287627	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr1:226542723-226543214	chr1:226542723-226542745
MER61_1q42.12	HERV	MER61	prototype	chr1	226611190	226616622	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ITPKB	ENSG00000143772	15068	STUM	ENSG00000203685	1960	None	None
HERVH_1q42.13a	HERV	HERVH	prototype	chr1	226833503	226838404	+	noncoding	AL359732.1	lncRNA	SENSE	ENSG00000287259	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_1q42.13	HERV	MER4	prototype	chr1	226847392	226856641	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL359732.1	ENSG00000287259	13486	PSEN2	ENSG00000143801	13543	None	None
ERV316A3_1q42.13a	HERV	ERV316A3	internal	chr1	227353706	227355425	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01641	ENSG00000234277	38129	CDC42BPA	ENSG00000143776	35232	None	None
ERV316A3_1q42.13b	HERV	ERV316A3	prototype	chr1	227357275	227360947	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01641	ENSG00000234277	32607	CDC42BPA	ENSG00000143776	38801	None	None
ERVLB4_1q42.13a	HERV	ERVLB4	oneside	chr1	227444112	227445934	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BTF3P9	ENSG00000224834	9766	AL451054.2	ENSG00000237193	36319	None	None
PRIMA41_1q42.13a	HERV	PRIMA41	internal	chr1	227495272	227496668	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUBB8P9	ENSG00000235827	9514	TUBB8P10	ENSG00000237469	130	None	None
PRIMA41_1q42.13b	HERV	PRIMA41	internal	chr1	227496775	227499185	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUBB8P9	ENSG00000235827	6997	TUBB8P10	ENSG00000237469	1633	None	None
PRIMA41_1q42.13c	HERV	PRIMA41	internal	chr1	227500566	227506052	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUBB8P10	ENSG00000237469	5424	TUBB8P9	ENSG00000235827	130	None	None
HERV3_1q42.13	HERV	HERV3	oneside	chr1	227556186	227558349	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL451054.4	ENSG00000287205	35567	RNA5SP77	ENSG00000202264	2832	chr1:227557913-227558151	None
HARLEQUIN_1q42.13a	HERV	HARLEQUIN	prototype	chr1	227589454	227596654	-	noncoding	ZNF678	protein_coding	ANTISENSE	ENSG00000181450	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_1q42.13	HERV	ERVL	internal	chr1	227616464	227618120	+	noncoding	ZNF678	protein_coding	SENSE	ENSG00000181450	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_1q42.13	HERV	HERVW	prototype	chr1	227624514	227633559	-	noncoding	ZNF678	protein_coding	ANTISENSE	ENSG00000181450	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH48_1q42.13	HERV	HERVH48	prototype	chr1	227635565	227641349	-	noncoding	ZNF678	protein_coding	ANTISENSE	ENSG00000181450	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_1q42.13c	HERV	HARLEQUIN	tandem*	chr1	227677124	227686201	+	noncoding	ZNF678	protein_coding	SENSE	ENSG00000181450	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_1q42.13b	HERV	HARLEQUIN	oneside	chr1	227717792	227719674	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF847P	ENSG00000215812	11093	SNAP47	ENSG00000143740	8865	None	None
HERVIP10FH_1q42.13	HERV	HERVIP10FH	oneside	chr1	227719675	227721313	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SNAP47	ENSG00000143740	7226	ZNF847P	ENSG00000215812	12976	None	None
ERV316A3_1q42.13c	HERV	ERV316A3	internal	chr1	227865345	227868077	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRSS38	ENSG00000185888	18875	WNT9A	ENSG00000143816	50579	None	None
MER34B_1q42.13	HERV	MER34B	internal	chr1	228132055	228133945	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359510.2	ENSG00000280157	8284	AL359510.1	ENSG00000227625	840	None	None
HERVL_1q42.13	HERV	HERVL	internal	chr1	228250669	228253090	-	noncoding	OBSCN,AL353593.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000154358,ENSG00000269934	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_1q42.13a	HERV	MER101	internal	chr1	228648618	228650136	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP18	ENSG00000212237	586	DUSP5P1	ENSG00000183929	105	None	None
HERVH_1q42.13b	HERV	HERVH	prototype	chr1	228676559	228682714	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	FTH1P2	ENSG00000234975	4701	AL713899.1	ENSG00000206878	23999	None	None
HERVH_1q42.13c	HERV	HERVH	prototype	chr1	228947424	228951887	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL078624.1	ENSG00000271399	88868	LINC02815	ENSG00000282111	70886	None	None
ERV316A3_1q42.13d	HERV	ERV316A3	internal	chr1	229141459	229145532	+	noncoding	LINC02814	lncRNA	ANTISENSE	ENSG00000236975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1q42.13d	HERV	HERVH	prototype	chr1	229174258	229180176	+	noncoding	LINC02814	lncRNA	ANTISENSE	ENSG00000236975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:229176863-229176876
HERVH_1q42.13e	HERV	HERVH	prototype	chr1	229412418	229418665	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP276	ENSG00000252051	1651	AL160004.2	ENSG00000230331	6355	None	None
ERV316A3_1q42.13e	HERV	ERV316A3	internal	chr1	229573473	229574907	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TAF5L	ENSG00000135801	18204	HMGN2P19	ENSG00000229367	2677	None	None
ERVLB4_1q42.13b	HERV	ERVLB4	oneside	chr1	229604400	229605948	+	noncoding	TAF5L	protein_coding	ANTISENSE	ENSG00000135801	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_1q42.13b	HERV	MER101	oneside	chr1	229823919	229828752	+	noncoding	LINC01682	lncRNA	ANTISENSE	ENSG00000227043	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_1q42.13c	HERV	MER101	oneside	chr1	229829321	229833252	+	noncoding	LINC01682	lncRNA	ANTISENSE	ENSG00000227043	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1q42.13f	HERV	ERV316A3	internal	chr1	229887855	229890725	+	noncoding	LINC01682	lncRNA	ANTISENSE	ENSG00000227043	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1q42.2a	HERV	ERV316A3	oneside	chr1	230541931	230546466	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133516.1	ENSG00000282564	105109	LINC01737	ENSG00000232964	46194	None	None
ERVLE_1q42.2a	HERV	ERVLE	internal	chr1	230582388	230583608	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01737	ENSG00000232964	9052	AL133516.1	ENSG00000282564	145566	None	None
HERVH_1q42.2a	HERV	HERVH	prototype	chr1	230601216	230609094	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01737	ENSG00000232964	5633	AL158214.1	ENSG00000235817	2915	None	chr1:230607000-230607009
ERVLE_1q42.2b	HERV	ERVLE	internal	chr1	231515904	231517493	-	noncoding	AL445524.2	protein_coding	SENSE	ENSG00000287856	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1q42.2b	HERV	HERVH	prototype	chr1	231829672	231835648	-	noncoding	DISC1,AL136171.2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000162946,ENSG00000286071	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_1q42.2c	HERV	HERVH	prototype	chr1	232118115	232123945	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DISC1	ENSG00000162946	76843	AL353052.1	ENSG00000235152	36146	None	chr1:232118459-232118470
ERVLE_1q42.2c	HERV	ERVLE	internal	chr1	232153536	232154835	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353052.1	ENSG00000235152	5256	DISC1	ENSG00000162946	112264	None	None
HERVL_1q42.2	HERV	HERVL	oneside	chr1	232196552	232201638	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX323014.1	ENSG00000224436	20300	AL353052.1	ENSG00000235152	10909	None	None
ERV316A3_1q42.2b	HERV	ERV316A3	oneside	chr1	232213630	232216676	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353052.1	ENSG00000235152	27987	BX323014.1	ENSG00000224436	5262	None	None
HERVH_1q42.2d	HERV	HERVH	prototype	chr1	232229629	232234999	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SIPA1L2	ENSG00000116991	162966	RN7SL299P	ENSG00000242794	6484	None	None
ERV316A3_1q42.2c	HERV	ERV316A3	oneside	chr1	232745164	232747470	+	noncoding	LINC01744	lncRNA	ANTISENSE	ENSG00000236497	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q42.2d	HERV	ERVLE	oneside	chr1	232931162	232935648	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL122003.1	ENSG00000232175	13144	NTPCR	ENSG00000135778	14957	None	None
HERVL74_1q42.2	HERV	HERVL74	internal	chr1	233588967	233591729	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL360006.1	ENSG00000287423	45334	KCNK1	ENSG00000135750	22377	None	None
HERVH_1q42.2e	HERV	HERVH	prototype	chr1	233683449	233689204	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357972.1	ENSG00000286109	35250	KCNK1	ENSG00000135750	10935	None	None
MER61_1q42.2a	HERV	MER61	oneside	chr1	233725225	233729737	-	noncoding	AL357972.1	lncRNA	ANTISENSE	ENSG00000286109	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER61_1q42.2b	HERV	MER61	oneside	chr1	233730042	233731494	-	noncoding	AL357972.1	lncRNA	ANTISENSE	ENSG00000286109	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4B_1q42.2	HERV	MER4B	internal	chr1	233867096	233867589	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL663058.2	ENSG00000286666	1726	AL713868.1	ENSG00000287921	36515	None	None
ERVLB4_1q42.2	HERV	ERVLB4	prototype	chr1	233875154	233877864	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL663058.2	ENSG00000286666	9784	AL713868.1	ENSG00000287921	26240	None	None
MER41_1q42.3	HERV	MER41	prototype	chr1	235410260	235411639	-	noncoding	TBCE,TBCE	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000285053,ENSG00000284770	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q42.3	HERV	ERVLE	internal	chr1	236135271	236139173	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL122018.3	ENSG00000286142	4856	GPR137B	ENSG00000077585	3332	None	None
HERVL40_1q42.3	HERV	HERVL40	oneside	chr1	236334178	236336895	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EDARADD	ENSG00000186197	11362	AL450309.1	ENSG00000237922	47218	None	None
HERVH_1q43a	HERV	HERVH	prototype	chr1	236932317	236937922	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL35P1	ENSG00000237991	43417	MTR	ENSG00000116984	11039	None	None
HML4_1q43	HERV	HML4	oneside	chr1	237915275	237918989	+	coding	AL359924.1	lncRNA	SENSE	ENSG00000237250	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER61_1q43	HERV	MER61	prototype	chr1	238481160	238486145	-	noncoding	LINC01139,AL359551.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000215808,ENSG00000231877	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:238485977-238486016,chr1:238486019-238486045
ERV316A3_1q43a	HERV	ERV316A3	oneside	chr1	238509197	238512392	+	noncoding	AL359551.1	lncRNA	SENSE	ENSG00000231877	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1q43a	HERV	ERVLB4	oneside	chr1	238626678	238630665	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIPEPP2	ENSG00000224783	146384	AL359551.1	ENSG00000231877	88373	None	None
ERVLE_1q43a	HERV	ERVLE	internal	chr1	238674380	238677354	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIPEPP2	ENSG00000224783	99695	AL359551.1	ENSG00000231877	136075	None	None
ERV316A3_1q43b	HERV	ERV316A3	oneside	chr1	238712225	238714350	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIPEPP2	ENSG00000224783	62699	AL359551.1	ENSG00000231877	173920	None	None
HML2_1q43	HERV	HML2	oneside	chr1	238762295	238764473	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIPEPP2	ENSG00000224783	12576	AL359551.1	ENSG00000231877	223990	None	None
MER4B_1q43a	HERV	MER4B	internal	chr1	238923328	238924370	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590135.1	ENSG00000227854	128378	AL583825.1	ENSG00000287177	75213	None	None
MER4B_1q43b	HERV	MER4B	oneside	chr1	238927241	238929487	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590135.1	ENSG00000227854	123261	AL583825.1	ENSG00000287177	79126	None	None
HERVL_1q43a	HERV	HERVL	oneside	chr1	239038978	239040583	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL583825.1	ENSG00000287177	190863	AL590135.1	ENSG00000227854	12165	None	None
HERVH_1q43b	HERV	HERVH	prototype	chr1	239101236	239107062	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590135.1	ENSG00000227854	48333	AC093426.2	ENSG00000287589	98076	None	None
ERV316A3_1q43c	HERV	ERV316A3	prototype	chr1	239269924	239275810	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CHRM3	ENSG00000133019	110755	AC093426.1	ENSG00000259776	19106	None	None
ERVLE_1q43b	HERV	ERVLE	internal	chr1	239338231	239338820	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CHRM3	ENSG00000133019	47745	AC093426.1	ENSG00000259776	87413	None	None
LTR57_1q43	HERV	LTR57	internal	chr1	239928083	239929364	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356361.1	ENSG00000215805	43423	AL356361.2	ENSG00000231979	11128	None	None
MER41_1q43	HERV	MER41	internal	chr1	239929413	239930226	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356361.1	ENSG00000215805	42561	AL356361.2	ENSG00000231979	12458	None	None
ERVLB4_1q43b	HERV	ERVLB4	internal	chr1	239949309	239950727	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356361.1	ENSG00000215805	22060	AL356361.2	ENSG00000231979	32354	None	None
PABLB_1q43	HERV	PABLB	internal	chr1	239983320	239986167	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356361.3	ENSG00000287102	21357	AL356361.1	ENSG00000215805	9075	None	None
ERVLE_1q43c	HERV	ERVLE	internal	chr1	239988228	239989413	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356361.1	ENSG00000215805	13983	AL356361.3	ENSG00000287102	18111	None	None
ERVLE_1q43d	HERV	ERVLE	internal	chr1	240030554	240033332	+	noncoding	FMN2	protein_coding	SENSE	ENSG00000155816	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1q43d	HERV	ERV316A3	oneside	chr1	240419494	240421256	-	noncoding	FMN2	protein_coding	ANTISENSE	ENSG00000155816	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1q43e	HERV	ERV316A3	oneside	chr1	240485614	240489056	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FMN2	ENSG00000155816	10427	GREM2	ENSG00000180875	517	None	None
HERVH_1q43c	HERV	HERVH	prototype	chr1	241433889	241439882	+	noncoding	AL359764.2	lncRNA	SENSE	ENSG00000287516	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1q43c	HERV	ERVLB4	oneside	chr1	241450003	241456515	-	noncoding	AL359764.2,AL359764.3	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000287516,ENSG00000287738	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1q43d	HERV	ERVLB4	internal	chr1	242007259	242009413	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUBB8P6	ENSG00000224625	47672	MAP1LC3C	ENSG00000197769	8161	None	None
ERV316A3_1q43f	HERV	ERV316A3	internal	chr1	242009399	242010422	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUBB8P6	ENSG00000224625	46663	MAP1LC3C	ENSG00000197769	10301	None	None
PRIMA41_1q43	HERV	PRIMA41	internal	chr1	242053127	242056948	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAP1LC3C	ENSG00000197769	54029	TUBB8P6	ENSG00000224625	137	None	None
HML5_1q43	HERV	HML5	prototype	chr1	242211188	242216792	+	noncoding	PLD5	protein_coding	ANTISENSE	ENSG00000180287	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:242212472-242212570	None
HERVK11D_1q43	HERV	HERVK11D	oneside	chr1	242457057	242460442	+	coding	PLD5	protein_coding	ANTISENSE	ENSG00000180287	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q43e	HERV	ERVLE	internal	chr1	242756943	242758123	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RSL24D1P4	ENSG00000215800	14497	AC099785.1	ENSG00000270859	85367	None	None
HERVL_1q43b	HERV	HERVL	internal	chr1	242861903	242865121	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RSL24D1P4	ENSG00000215800	88800	AL445675.1	ENSG00000270818	16945	None	None
ERV316A3_1q43g	HERV	ERV316A3	oneside	chr1	242869310	242870897	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445675.1	ENSG00000270818	11169	RSL24D1P4	ENSG00000215800	96207	None	None
MER4B_1q44a	HERV	MER4B	internal	chr1	243625451	243626656	+	noncoding	AKT3	protein_coding	ANTISENSE	ENSG00000117020	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1q44a	HERV	ERV316A3	prototype	chr1	244003513	244010519	+	noncoding	LINC02774	lncRNA	SENSE	ENSG00000226828	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_1q44	HERV	HERVFRD	oneside	chr1	244303080	244306784	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358177.1	ENSG00000287531	115521	C1orf100	ENSG00000173728	45851	chr1:244303021-244303296,chr1:244304223-244304379	None
ERVL_1q44a	HERV	ERVL	oneside	chr1	244390034	244392185	-	noncoding	AL645465.1	lncRNA	SENSE	ENSG00000240963	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_1q44b	HERV	ERVL	oneside	chr1	244392218	244399244	-	noncoding	AL645465.1,TGIF2P1	lncRNA,processed_pseudogene	SENSE,SENSE	ENSG00000240963,ENSG00000225401	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_1q44a	HERV	HUERSP1	prototype	chr1	244453356	244460586	+	noncoding	CATSPERE	protein_coding	SENSE	ENSG00000179397	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1q44a	HERV	ERVLB4	oneside	chr1	244544100	244550311	+	noncoding	CATSPERE	protein_coding	SENSE	ENSG00000179397	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_1q44	HERV	HERVIP10FH	prototype	chr1	244573858	244576488	-	coding	CATSPERE	protein_coding	ANTISENSE	ENSG00000179397	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q44a	HERV	ERVLE	internal	chr1	244628305	244630889	-	noncoding	CATSPERE	protein_coding	ANTISENSE	ENSG00000179397	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_1q44b	HERV	ERV316A3	oneside	chr1	244644512	244646518	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CATSPERE	ENSG00000179397	3335	DESI2	ENSG00000121644	6585	None	None
MER41_1q44a	HERV	MER41	oneside	chr1	244815534	244818297	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL451007.2	ENSG00000282317	83948	BX323046.2	ENSG00000287601	16077	None	chr1:244815755-244815779,chr1:244815783-244815801,chr1:244815825-244815835
MER41_1q44b	HERV	MER41	oneside	chr1	244818602	244821738	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL451007.2	ENSG00000282317	87016	BX323046.2	ENSG00000287601	12636	None	None
ERV316A3_1q44c	HERV	ERV316A3	internal	chr1	245062647	245063542	-	noncoding	EFCAB2	protein_coding	ANTISENSE	ENSG00000203666	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1q44b	HERV	ERVLE	internal	chr1	245736451	245739287	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SMYD3	ENSG00000185420	10055	KIF26B	ENSG00000162849	27019	None	None
ERVLE_1q44c	HERV	ERVLE	internal	chr1	246500331	246501196	-	noncoding	SMYD3	protein_coding	SENSE	ENSG00000185420	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_1q44	HERV	HUERSP3	oneside	chr1	246529011	246538336	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356583.3	ENSG00000229112	170	TFB2M	ENSG00000162851	2225	None	None
HERVH48_1q44a	HERV	HERVH48	oneside	chr1	246605409	246606819	-	noncoding	CNST,AL591623.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000162852,ENSG00000225300	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH48_1q44b	HERV	HERVH48	prototype	chr1	246634716	246640099	-	noncoding	CNST	protein_coding	ANTISENSE	ENSG00000162852	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_1q44	HERV	HERVIP10F	oneside	chr1	246747512	246752385	-	noncoding	SCCPDH	protein_coding	ANTISENSE	ENSG00000143653	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_1q44	HERV	HML3	prototype	chr1	247024661	247030174	+	noncoding	ZNF670-ZNF695	protein_coding	ANTISENSE	ENSG00000135747	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK14C_1q44	HERV	HERVK14C	oneside	chr1	247106028	247111180	+	coding	AL627095.2,C1orf229	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000286747,ENSG00000221953	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_1q44	HERV	HERVL40	oneside	chr1	247144115	247148678	-	noncoding	ZNF124	protein_coding	SENSE	ENSG00000196418	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_1q44a	HERV	HERVP71A	oneside	chr1	247218171	247221832	+	noncoding	AL390728.5	lncRNA	ANTISENSE	ENSG00000232347	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:247218180-247218577	None
HERVH48_1q44c	HERV	HERVH48	prototype	chr1	247286141	247290862	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VN1R5	ENSG00000197617	28931	AC104335.1	ENSG00000202079	3973	None	chr1:247286229-247286235
HERVP71A_1q44b	HERV	HERVP71A	prototype	chr1	247354022	247360572	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104335.2	ENSG00000286216	5946	AC104335.3	ENSG00000287116	29671	chr1:247357822-247358009,chr1:247358944-247359443,chr1:247360162-247360458	chr1:247359352-247359363,chr1:247360453-247360458,chr1:247360182-247360201,chr1:247360228-247360239
HUERSP1_1q44b	HERV	HUERSP1	oneside	chr1	247381070	247385375	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104335.3	ENSG00000287116	4868	AC104335.2	ENSG00000286216	32994	chr1:247385297-247385514	None
ERVLE_1q44d	HERV	ERVLE	unknown	chr1	247528515	247530280	+	noncoding	GCSAML,OR2C3,GCSAML-AS1	protein_coding,protein_coding,protein_coding	SENSE,ANTISENSE,ANTISENSE	ENSG00000169224,ENSG00000196242,ENSG00000284824	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr1:247529570-247529578
ERVLB4_1q44b	HERV	ERVLB4	oneside	chr1	247577934	247580848	+	noncoding	AL606804.1	lncRNA	ANTISENSE	ENSG00000236817	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1q44	HERV	HERVL	prototype	chr1	247705022	247710327	-	noncoding	AL390860.1	lncRNA	ANTISENSE	ENSG00000235749	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_1q44c	HERV	ERVL	internal	chr1	247782785	247788803	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR14A16	ENSG00000196772	25857	OR9H1P	ENSG00000228336	3261	None	None
HARLEQUIN_1q44	HERV	HARLEQUIN	prototype	chr1	247898331	247905895	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR2T8	ENSG00000177462	14357	OR2W3	ENSG00000238243	1800	None	chr1:247904108-247904111,chr1:247905345-247905348
ERVLE_1q44e	HERV	ERVLE	internal	chr1	248158848	248160895	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR2M2	ENSG00000198601	13926	OR2M5	ENSG00000162727	12762	None	None
ERVLE_1q44f	HERV	ERVLE	internal	chr1	248215760	248221016	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR2M4	ENSG00000171180	10401	OR2M3	ENSG00000228198	2835	None	None
ERV316A3_1q44d	HERV	ERV316A3	internal	chr1	248244909	248245744	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR2M4	ENSG00000171180	230	OR2T33	ENSG00000177212	24173	None	None
HERVH_1q44	HERV	HERVH	prototype	chr1	248335766	248341106	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR14C36	ENSG00000177174	7669	OR2M7	ENSG00000177186	11198	None	None
MER4B_1q44b	HERV	MER4B	oneside	chr1	248415906	248417806	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR2T7	ENSG00000227152	18553	OR2T1	ENSG00000175143	7886	None	None
MER101_1q44	HERV	MER101	internal	chr1	248419102	248421874	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR2T7	ENSG00000227152	14485	OR2T1	ENSG00000175143	11082	None	None
HML6_1q44a	HERV	HML6	prototype	chr1	248431675	248434463	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR2T1	ENSG00000175143	23655	OR2T7	ENSG00000227152	1896	None	None
HML6_1q44b	HERV	HML6	prototype	chr1	248657606	248660352	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CR589904.2	ENSG00000286015	20897	OR2T27	ENSG00000187701	2078	None	None
MER4_1q44a	HERV	MER4	oneside	chr1	248713986	248718003	+	noncoding	CR589904.2,LYPD9P	protein_coding,transcribed_unitary_pseudogene	ANTISENSE,SENSE	ENSG00000286015,ENSG00000229703	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_1q44b	HERV	MER4	internal	chr1	248773924	248775499	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DPY19L4P1	ENSG00000229663	132	SH3BP5L	ENSG00000175137	34947	None	None
PABLA_2p25.3	HERV	PABLA	oneside	chr2	143112	144756	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079779.1	ENSG00000227061	52813	FAM110C	ENSG00000184731	96242	None	None
HERVW_2p25.3	HERV	HERVW	prototype	chr2	153396	160782	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079779.1	ENSG00000227061	36787	FAM110C	ENSG00000184731	106526	None	chr2:160522-160528
LTR57_2p25.3	HERV	LTR57	internal	chr2	181012	182290	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM110C	ENSG00000184731	134142	AC079779.1	ENSG00000227061	15279	None	None
HERVFRD_2p25.3	HERV	HERVFRD	oneside	chr2	826396	829540	+	noncoding	LINC01115	lncRNA	ANTISENSE	ENSG00000237667	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p25.3a	HERV	ERVLE	internal	chr2	1141349	1143413	-	noncoding	SNTG2	protein_coding	ANTISENSE	ENSG00000172554	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2p25.3a	HERV	HERVL	prototype	chr2	1284963	1286863	-	noncoding	SNTG2	protein_coding	ANTISENSE	ENSG00000172554	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2p25.3a	HERV	ERV316A3	prototype	chr2	2440429	2445607	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MYT1L	ENSG00000186487	108765	AC018685.2	ENSG00000234929	192571	None	None
ERVLE_2p25.3b	HERV	ERVLE	internal	chr2	2461808	2463937	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MYT1L	ENSG00000186487	130144	AC018685.2	ENSG00000234929	174241	None	None
PRIMA4_2p25.3	HERV	PRIMA4	internal	chr2	2673701	2676457	-	noncoding	AC018685.2	lncRNA	SENSE	ENSG00000234929	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2p25.3b	HERV	HERVL	oneside	chr2	2676664	2679681	+	noncoding	AC018685.2	lncRNA	ANTISENSE	ENSG00000234929	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p25.3c	HERV	ERVLE	internal	chr2	3035957	3037806	-	noncoding	LINC01250	lncRNA	SENSE	ENSG00000234423	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2p25.3b	HERV	ERV316A3	internal	chr2	3261101	3263444	+	noncoding	EIPR1	protein_coding	ANTISENSE	ENSG00000032389	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2p25.3	HERV	ERVLB4	internal	chr2	3267103	3270169	+	noncoding	EIPR1	protein_coding	ANTISENSE	ENSG00000032389	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2p25.3	HERV	HERVH	prototype	chr2	3815549	3821340	-	noncoding	DCDC2C	protein_coding	ANTISENSE	ENSG00000214866	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2p25.3c	HERV	HERVL	prototype	chr2	4056768	4063326	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01304	ENSG00000237401	82644	AC012445.1	ENSG00000229550	73318	None	None
HUERSP3B_2p25.3a	HERV	HUERSP3B	internal	chr2	4169315	4173213	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPM1P48	ENSG00000231821	340991	AC012445.1	ENSG00000229550	28584	None	None
HUERSP3B_2p25.3b	HERV	HUERSP3B	oneside	chr2	4173635	4176880	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPM1P48	ENSG00000231821	337324	AC012445.1	ENSG00000229550	32904	None	chr2:4176469-4176472
ERV316A3_2p25.3c	HERV	ERV316A3	internal	chr2	4302238	4303569	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012445.1	ENSG00000229550	161507	NPM1P48	ENSG00000231821	210635	None	None
ERV316A3_2p25.3d	HERV	ERV316A3	oneside	chr2	4303969	4305770	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPM1P48	ENSG00000231821	208434	AC012445.1	ENSG00000229550	163238	None	None
HERVL_2p25.2	HERV	HERVL	prototype	chr2	4484113	4490647	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPM1P48	ENSG00000231821	23557	AC012445.1	ENSG00000229550	343382	None	None
HERVH_2p25.2	HERV	HERVH	prototype	chr2	5000769	5006730	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-649P	ENSG00000207192	55386	AC073143.1	ENSG00000228585	307010	None	None
ERVLE_2p25.2a	HERV	ERVLE	oneside	chr2	5042589	5044478	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073143.1	ENSG00000228585	269262	RNU6-649P	ENSG00000207192	97206	None	None
ERVL_2p25.2	HERV	ERVL	oneside	chr2	5414971	5417124	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107057.1	ENSG00000232835	132656	AC073143.1	ENSG00000228585	100837	None	None
ERVLE_2p25.2b	HERV	ERVLE	internal	chr2	5818618	5820022	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SILC1	ENSG00000232044	112521	LINC01810	ENSG00000237266	5948	None	None
HUERSP2_2p25.2a	HERV	HUERSP2	oneside	chr2	6683355	6684588	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00487	ENSG00000205837	43589	MIR7515HG	ENSG00000236172	32251	None	None
HUERSP2_2p25.2b	HERV	HUERSP2	oneside	chr2	6684655	6687451	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00487	ENSG00000205837	40726	MIR7515HG	ENSG00000236172	33551	None	None
HUERSP3_2p25.2	HERV	HUERSP3	internal	chr2	6838364	6846887	-	noncoding	NRIR,CMPK2	lncRNA,protein_coding	SENSE,SENSE	ENSG00000225964,ENSG00000134326	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER101_2p25.2	HERV	MER101	oneside	chr2	6869773	6876489	+	noncoding	RSAD2	protein_coding	SENSE	ENSG00000134321	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2p25.1a	HERV	ERVLB4	internal	chr2	7183894	7184578	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010904.2	ENSG00000272002	76293	RN7SKP112	ENSG00000223145	42350	None	None
HERVL_2p25.1	HERV	HERVL	oneside	chr2	7296146	7298780	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010904.1	ENSG00000213774	25968	AC010904.2	ENSG00000272002	34642	None	None
HERVH_2p25.1	HERV	HERVH	prototype	chr2	7872706	7878891	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007463.1	ENSG00000226506	7876	AC092580.1	ENSG00000229405	135611	None	chr2:7876636-7876654
ERV316A3_2p25.1a	HERV	ERV316A3	prototype	chr2	8296771	8302648	-	noncoding	LINC00299	lncRNA	SENSE	ENSG00000236790	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr2:8298887-8299145,chr2:8302282-8302518	chr2:8302048-8302056
PABLA_2p25.1	HERV	PABLA	internal	chr2	10199041	10202321	-	noncoding	RRM2	protein_coding	ANTISENSE	ENSG00000171848	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr2:10201357-10201779	chr2:10201360-10201365,chr2:10201405-10201408,chr2:10201467-10201478
ERV316A3_2p25.1b	HERV	ERV316A3	prototype	chr2	11395773	11400825	-	noncoding	LINC00570	lncRNA	ANTISENSE	ENSG00000224177	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:11399039-11399057
HERVH48_2p25.1	HERV	HERVH48	oneside	chr2	11425312	11426640	+	noncoding	AC099344.3	lncRNA	SENSE	ENSG00000285569	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2p25.1b	HERV	ERVLB4	internal	chr2	11460960	11462158	-	noncoding	E2F6	protein_coding	SENSE	ENSG00000169016	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2p25.1c	HERV	ERVLB4	internal	chr2	11911422	11912750	-	noncoding	MIR3681HG	lncRNA	ANTISENSE	ENSG00000224184	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2p24.3a	HERV	HERVH	prototype	chr2	12569680	12575439	+	noncoding	MIR3681HG	lncRNA	SENSE	ENSG00000224184	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2p24.3b	HERV	HERVH	prototype	chr2	12626335	12632257	+	noncoding	MIR3681HG	lncRNA	SENSE	ENSG00000224184	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2p24.3a	HERV	ERV316A3	internal	chr2	12749922	12751680	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC064875.1	ENSG00000225649	28913	TRIB2	ENSG00000071575	7188	None	None
MER4_2p24.3a	HERV	MER4	oneside	chr2	13084386	13088256	+	noncoding	AC093912.1	lncRNA	SENSE	ENSG00000285876	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2p24.3c	HERV	HERVH	prototype	chr2	13163759	13169724	-	noncoding	AC093912.1	lncRNA	ANTISENSE	ENSG00000285876	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2p24.3b	HERV	ERV316A3	oneside	chr2	13325730	13330417	-	noncoding	AC093912.1	lncRNA	ANTISENSE	ENSG00000285876	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_2p24.3	HERV	HARLEQUIN	prototype	chr2	13525956	13533609	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073062.1	ENSG00000229370	4064	AC093912.1	ENSG00000285876	194273	None	None
MER41_2p24.3	HERV	MER41	internal	chr2	13645118	13648942	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00276	ENSG00000230448	61589	AC073062.1	ENSG00000229370	35950	None	None
HERVIP10F_2p24.3	HERV	HERVIP10F	internal	chr2	13677607	13678556	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073062.1	ENSG00000229370	68439	LINC00276	ENSG00000230448	31975	None	None
HERVIP10FH_2p24.3a	HERV	HERVIP10FH	internal	chr2	13678608	13680658	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073062.1	ENSG00000229370	69440	LINC00276	ENSG00000230448	29873	None	None
HERVIP10FH_2p24.3b	HERV	HERVIP10FH	oneside	chr2	13680687	13682534	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073062.1	ENSG00000229370	71519	LINC00276	ENSG00000230448	27997	None	None
HUERSP3B_2p24.3	HERV	HUERSP3B	internal	chr2	13684812	13687809	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073062.1	ENSG00000229370	75644	LINC00276	ENSG00000230448	22722	None	None
ERVLB4_2p24.3a	HERV	ERVLB4	prototype	chr2	13708822	13710483	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073062.1	ENSG00000229370	99654	LINC00276	ENSG00000230448	48	None	None
MER4_2p24.3b	HERV	MER4	oneside	chr2	13742205	13744870	+	noncoding	LINC00276,AC016730.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000230448,ENSG00000227718	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_2p24.3c	HERV	MER4	oneside	chr2	13750923	13753468	+	noncoding	LINC00276,AC016730.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000230448,ENSG00000227718	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p24.3a	HERV	ERVLE	internal	chr2	14022959	14023658	+	noncoding	LINC00276	lncRNA	ANTISENSE	ENSG00000230448	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2p24.3b	HERV	ERVLB4	internal	chr2	14142637	14143273	+	noncoding	LINC00276	lncRNA	ANTISENSE	ENSG00000230448	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p24.3b	HERV	ERVLE	internal	chr2	14382039	14382874	-	noncoding	LINC00276	lncRNA	SENSE	ENSG00000230448	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p24.3c	HERV	ERVLE	internal	chr2	14450372	14451148	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC131957.1	ENSG00000237261	79793	LINC00276	ENSG00000230448	49409	None	None
ERVLE_2p24.3d	HERV	ERVLE	internal	chr2	14460771	14462027	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC131957.1	ENSG00000237261	68914	LINC00276	ENSG00000230448	59808	None	None
ERV316A3_2p24.3c	HERV	ERV316A3	oneside	chr2	14875746	14878608	-	noncoding	AC068286.2	lncRNA	SENSE	ENSG00000287291	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2p24.3c	HERV	ERVLB4	oneside	chr2	15579444	15581173	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008278.2	ENSG00000234022	5576	DDX1	ENSG00000079785	10005	None	None
ERVLE_2p24.2a	HERV	ERVLE	internal	chr2	16526296	16530065	+	noncoding	AC104623.1	lncRNA	SENSE	ENSG00000237633	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_2p24.2a	HERV	HERVL	prototype	chr2	16747949	16754409	-	noncoding	AC008164.1	lncRNA	ANTISENSE	ENSG00000223536	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2p24.2	HERV	HERVH	prototype	chr2	16791945	16797703	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008069.1	ENSG00000224604	56117	AC008164.1	ENSG00000223536	22378	None	None
HERVL40_2p24.2	HERV	HERVL40	oneside	chr2	16847498	16850434	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008164.1	ENSG00000223536	77931	AC008069.1	ENSG00000224604	3386	None	None
HUERSP2_2p24.2a	HERV	HUERSP2	oneside	chr2	16900896	16902199	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008069.1	ENSG00000224604	45612	LINC01866	ENSG00000237670	67835	None	None
HERVL_2p24.2b	HERV	HERVL	oneside	chr2	16902202	16906295	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01866	ENSG00000237670	63739	AC008069.1	ENSG00000224604	46918	None	None
HERVL_2p24.2c	HERV	HERVL	oneside	chr2	16912216	16916290	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008069.1	ENSG00000224604	56932	LINC01866	ENSG00000237670	53744	chr2:16911542-16912219	None
ERVLE_2p24.2b	HERV	ERVLE	internal	chr2	16975512	16976525	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01866	ENSG00000237670	1015	RN7SKP168	ENSG00000222842	146316	None	None
HERVW_2p24.2	HERV	HERVW	prototype	chr2	17338941	17346714	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZFYVE9P2	ENSG00000214843	54046	PSMC1P10	ENSG00000236348	38377	None	None
HUERSP2_2p24.2b	HERV	HUERSP2	internal	chr2	17995216	17995793	+	noncoding	KCNS3	protein_coding	SENSE	ENSG00000170745	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_2p24.2	HERV	MER61	oneside	chr2	17998086	18002368	+	noncoding	KCNS3	protein_coding	SENSE	ENSG00000170745	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_2p24.2	HERV	HERVP71A	oneside	chr2	18082802	18089476	-	noncoding	KCNS3	protein_coding	ANTISENSE	ENSG00000170745	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2p24.2d	HERV	HERVL	oneside	chr2	18878252	18882590	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC106053.1	ENSG00000224626	90500	AC130814.1	ENSG00000287284	57107	None	None
ERVLE_2p24.1a	HERV	ERVLE	internal	chr2	19814422	19815880	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CISD1P1	ENSG00000213403	10369	AC019055.1	ENSG00000235911	96846	None	None
HML3_2p24.1	HERV	HML3	prototype	chr2	19922747	19928511	+	noncoding	WDR35	protein_coding	ANTISENSE	ENSG00000118965	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2p24.1	HERV	HERVH	prototype	chr2	20082562	20088123	+	noncoding	AC098828.2	lncRNA	ANTISENSE	ENSG00000234378	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p24.1b	HERV	ERVLE	internal	chr2	21135294	21135998	-	noncoding	TDRD15	protein_coding	ANTISENSE	ENSG00000218819	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p24.1c	HERV	ERVLE	internal	chr2	21159758	21160817	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC067959.1	ENSG00000271629	37701	TDRD15	ENSG00000218819	15390	None	None
ERVLE_2p24.1d	HERV	ERVLE	internal	chr2	21180498	21184746	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC067959.1	ENSG00000271629	13772	TDRD15	ENSG00000218819	36130	None	None
ERVLB4_2p24.1a	HERV	ERVLB4	internal	chr2	21307175	21308614	+	noncoding	AC018742.1	lncRNA	SENSE	ENSG00000233005	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2p24.1b	HERV	ERVLB4	internal	chr2	21311667	21313374	+	noncoding	AC018742.1	lncRNA	SENSE	ENSG00000233005	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p24.1e	HERV	ERVLE	oneside	chr2	21358692	21360294	-	noncoding	AC018742.1,AC011752.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000233005,ENSG00000231204	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2p24.1a	HERV	ERV316A3	prototype	chr2	21396567	21398547	+	noncoding	AC018742.1,AC011752.1	lncRNA,lncRNA	SENSE,SENSE	ENSG00000233005,ENSG00000231204	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER101_2p24.1	HERV	MER101	prototype	chr2	21506174	21513224	+	noncoding	AC018742.1,AC011752.1	lncRNA,lncRNA	SENSE,SENSE	ENSG00000233005,ENSG00000231204	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p24.1f	HERV	ERVLE	oneside	chr2	21674936	21677416	-	noncoding	AC018742.1	lncRNA	ANTISENSE	ENSG00000233005	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p24.1g	HERV	ERVLE	internal	chr2	21684149	21687266	-	noncoding	AC018742.1	lncRNA	ANTISENSE	ENSG00000233005	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_2p24.1	HERV	HERVFRD	prototype	chr2	22122387	22127052	+	noncoding	AC096570.1	lncRNA	ANTISENSE	ENSG00000228999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2p24.1b	HERV	ERV316A3	internal	chr2	22202082	22203195	+	noncoding	AC096570.1	lncRNA	ANTISENSE	ENSG00000228999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2p24.1c	HERV	ERV316A3	oneside	chr2	22206096	22209338	+	noncoding	AC096570.1	lncRNA	ANTISENSE	ENSG00000228999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_2p24.1	HERV	ERVL	internal	chr2	22719948	22723461	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01884	ENSG00000233587	171148	RN7SKP27	ENSG00000222616	138091	None	None
ERV316A3_2p24.1d	HERV	ERV316A3	oneside	chr2	23311872	23313218	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018467.1	ENSG00000232451	112816	AC012506.1	ENSG00000223530	17446	None	None
HERVL40_2p23.3a	HERV	HERVL40	oneside	chr2	24114227	24115332	-	noncoding	FAM228B,PFN4	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000219626,ENSG00000176732	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_2p23.3b	HERV	HERVL40	oneside	chr2	24316835	24321156	+	noncoding	ITSN2	protein_coding	ANTISENSE	ENSG00000198399	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2p23.3	HERV	HERVL	internal	chr2	24988054	24990691	+	noncoding	DNAJC27-AS1	lncRNA	SENSE	ENSG00000224165	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2p23.3	HERV	ERVLB4	internal	chr2	25025385	25030324	+	noncoding	DNAJC27-AS1	lncRNA	SENSE	ENSG00000224165	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p23.3a	HERV	ERVLE	internal	chr2	25325538	25326295	+	noncoding	DNMT3A	protein_coding	ANTISENSE	ENSG00000119772	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2p23.3a	HERV	ERV316A3	prototype	chr2	25883138	25889177	+	noncoding	NDUFB4P4	processed_pseudogene	ANTISENSE	ENSG00000217718	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p23.3b	HERV	ERVLE	internal	chr2	26219492	26224762	+	noncoding	HADHA	protein_coding	ANTISENSE	ENSG00000084754	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_2p23.3	HERV	HML5	oneside	chr2	26256938	26259651	-	noncoding	HADHB	protein_coding	ANTISENSE	ENSG00000138029	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2p23.3b	HERV	ERV316A3	internal	chr2	26402437	26405320	-	noncoding	DRC1	protein_coding	ANTISENSE	ENSG00000157856	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_2p23.1	HERV	MER4B	internal	chr2	30162231	30163174	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	YPEL5	ENSG00000119801	1698	SNORA10B	ENSG00000207187	24260	None	None
HERVIP10FH_2p23.1	HERV	HERVIP10FH	internal	chr2	30516724	30518550	+	noncoding	LCLAT1	protein_coding	SENSE	ENSG00000172954	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_2p23.1a	HERV	HERVW	oneside	chr2	30518533	30520264	+	noncoding	LCLAT1	protein_coding	SENSE	ENSG00000172954	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p23.1a	HERV	ERVLE	internal	chr2	31469813	31471466	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SRD5A2	ENSG00000277893	51014	XDH	ENSG00000158125	55071	None	None
HERVW_2p23.1b	HERV	HERVW	prototype	chr2	31629154	31634158	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SRD5A2	ENSG00000277893	48216	AL133247.2	ENSG00000270422	17223	None	None
HERVL40_2p23.1	HERV	HERVL40	oneside	chr2	31660855	31661594	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01946	ENSG00000223647	132229	AL133247.2	ENSG00000270422	8993	None	None
HUERSP3_2p23.1	HERV	HUERSP3	prototype	chr2	31687476	31695509	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01946	ENSG00000223647	98314	AL133247.2	ENSG00000270422	35614	None	None
ERVLE_2p23.1b	HERV	ERVLE	internal	chr2	31744149	31747416	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01946	ENSG00000223647	46407	AL133247.2	ENSG00000270422	92287	None	None
ERVLE_2p22.3a	HERV	ERVLE	internal	chr2	32383399	32387396	-	noncoding	BIRC6	protein_coding	ANTISENSE	ENSG00000115760	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p22.3b	HERV	ERVLE	internal	chr2	32751649	32752652	-	noncoding	TTC27	protein_coding	ANTISENSE	ENSG00000018699	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_2p22.3	HERV	HUERSP1	oneside	chr2	33611429	33618234	+	coding	AC017050.1	lncRNA	SENSE	ENSG00000286415	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_2p22.3	HERV	HERVW	prototype	chr2	33657422	33664455	+	noncoding	AC017050.1	lncRNA	SENSE	ENSG00000286415	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER61_2p22.3a	HERV	MER61	internal	chr2	33664461	33666453	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC017050.1	ENSG00000286415	7001	LINC01320	ENSG00000228262	40433	None	None
ERVLE_2p22.3c	HERV	ERVLE	internal	chr2	33786947	33789463	-	noncoding	LINC01320	lncRNA	ANTISENSE	ENSG00000228262	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_2p22.3	HERV	MER4B	internal	chr2	33848020	33849740	+	noncoding	LINC01320	lncRNA	SENSE	ENSG00000228262	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_2p22.3	HERV	HML3	prototype	chr2	33914037	33919523	-	noncoding	LINC01320	lncRNA	ANTISENSE	ENSG00000228262	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p22.3d	HERV	ERVLE	internal	chr2	34070451	34074983	-	noncoding	LINC01320	lncRNA	ANTISENSE	ENSG00000228262	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2p22.3a	HERV	ERV316A3	oneside	chr2	34305814	34306995	+	noncoding	LINC01320	lncRNA	SENSE	ENSG00000228262	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2p22.3b	HERV	ERV316A3	oneside	chr2	34433042	34436259	-	noncoding	LINC01320	lncRNA	ANTISENSE	ENSG00000228262	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2p22.3a	HERV	HERVH	oneside	chr2	34694558	34696877	+	noncoding	LINC01320,AC073218.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000228262,ENSG00000272027	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2p22.3b	HERV	HERVH	oneside	chr2	34696878	34701369	-	noncoding	LINC01320,AC073218.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000228262,ENSG00000272027	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr2:34697924-34698173	None
HERVH_2p22.3c	HERV	HERVH	oneside	chr2	34701370	34702833	+	noncoding	LINC01320,AC073218.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000228262,ENSG00000272027	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2p22.3c	HERV	ERV316A3	internal	chr2	34737167	34739830	-	noncoding	LINC01320,AC012593.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000228262,ENSG00000232153	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_2p22.3d	HERV	HERVH	prototype	chr2	34789819	34796056	+	noncoding	AC012593.2	lncRNA	ANTISENSE	ENSG00000232153	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2p22.3e	HERV	HERVH	prototype	chr2	34800999	34806725	-	noncoding	AC012593.2,AC012593.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000232153,ENSG00000226994	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2p22.3d	HERV	ERV316A3	oneside	chr2	34964811	34966459	+	noncoding	AC012593.1	lncRNA	SENSE	ENSG00000226994	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_2p22.3	HERV	MER101	oneside	chr2	35328929	35334325	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC013442.2	ENSG00000288535	43932	MIR548AD	ENSG00000265301	137080	None	None
LTR57_2p22.3	HERV	LTR57	internal	chr2	35330722	35331320	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC013442.2	ENSG00000288535	45725	MIR548AD	ENSG00000265301	140085	None	None
HUERSP2_2p22.3	HERV	HUERSP2	prototype	chr2	35341769	35344327	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC013442.2	ENSG00000288535	56772	MIR548AD	ENSG00000265301	127078	None	None
HERVH_2p22.3f	HERV	HERVH	prototype	chr2	35436928	35442587	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548AD	ENSG00000265301	28818	AC013442.2	ENSG00000288535	151931	None	None
ERV316A3_2p22.3e	HERV	ERV316A3	prototype	chr2	35445138	35448048	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548AD	ENSG00000265301	23357	AC013442.2	ENSG00000288535	160141	None	None
MER61_2p22.3b	HERV	MER61	prototype	chr2	35517180	35523499	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPL50P1	ENSG00000234587	201260	AC083939.1	ENSG00000229013	45339	None	None
ERV316A3_2p22.3f	HERV	ERV316A3	oneside	chr2	35644113	35646695	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC083939.1	ENSG00000229013	172272	MRPL50P1	ENSG00000234587	78064	None	None
ERV316A3_2p22.3g	HERV	ERV316A3	oneside	chr2	35653338	35658408	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC083939.1	ENSG00000229013	181497	MRPL50P1	ENSG00000234587	66351	None	None
HERVL18_2p22.3	HERV	HERVL18	prototype	chr2	35787746	35790802	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPL50P1	ENSG00000234587	62604	AC009414.1	ENSG00000233752	508586	None	None
HERVH_2p22.3g	HERV	HERVH	oneside	chr2	35814050	35818777	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPL50P1	ENSG00000234587	88908	AC009414.1	ENSG00000233752	480611	None	None
ERV316A3_2p22.3h	HERV	ERV316A3	oneside	chr2	35918470	35921590	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009414.1	ENSG00000233752	377798	MRPL50P1	ENSG00000234587	193328	None	None
ERV316A3_2p22.3i	HERV	ERV316A3	internal	chr2	36282175	36283242	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009414.1	ENSG00000233752	16146	MRPL50P1	ENSG00000234587	557033	None	None
HERVH_2p22.2a	HERV	HERVH	prototype	chr2	36599100	36604761	+	noncoding	FEZ2	protein_coding	ANTISENSE	ENSG00000171055	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH19_2p22.2	HERV	HERVFH19	oneside	chr2	37128668	37135454	+	noncoding	EIF2AK2	protein_coding	ANTISENSE	ENSG00000055332	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:37131761-37132134	None
HERVH_2p22.2b	HERV	HERVH	prototype	chr2	37381018	37385604	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1116P	ENSG00000253078	49906	QPCT	ENSG00000115828	7696	chr2:37384381-37384468	chr2:37382718-37382741,chr2:37384492-37384533
ERVLE_2p22.2a	HERV	ERVLE	internal	chr2	37471238	37472249	+	noncoding	AC007391.3	lncRNA	SENSE	ENSG00000287316	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2p22.2c	HERV	HERVH	prototype	chr2	38080802	38086512	-	noncoding	CYP1B1,CYP1B1-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000138061,ENSG00000232973	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2p22.2	HERV	ERV316A3	prototype	chr2	38246110	38252249	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009229.1	ENSG00000227292	6520	GAPDHP25	ENSG00000213594	33161	None	None
ERVLE_2p22.2b	HERV	ERVLE	internal	chr2	38280065	38281906	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009229.1	ENSG00000227292	40475	GAPDHP25	ENSG00000213594	3504	None	None
ERVL_2p22.1a	HERV	ERVL	oneside	chr2	39129621	39132084	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092672.1	ENSG00000202309	694	CDKL4	ENSG00000205111	43562	None	None
ERVLE_2p22.1a	HERV	ERVLE	internal	chr2	39219723	39220586	+	noncoding	CDKL4	protein_coding	ANTISENSE	ENSG00000205111	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_2p22.1b	HERV	ERVL	oneside	chr2	39551801	39557615	-	noncoding	MAP4K3-DT	lncRNA	ANTISENSE	ENSG00000231312	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p22.1b	HERV	ERVLE	internal	chr2	39730056	39733131	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	THUMPD2	ENSG00000138050	2929	TMEM178A	ENSG00000152154	12093	None	None
HERVL_2p22.1a	HERV	HERVL	prototype	chr2	39958235	39965503	-	noncoding	SLC8A1-AS1	lncRNA	ANTISENSE	ENSG00000227028	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2p22.1	HERV	ERV316A3	internal	chr2	40721936	40722910	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01794	ENSG00000233128	23571	AC007317.1	ENSG00000285898	42332	None	None
ERVLE_2p22.1c	HERV	ERVLE	internal	chr2	40741602	40743249	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01794	ENSG00000233128	3232	AC007317.1	ENSG00000285898	61998	None	None
ERVLB4_2p22.1	HERV	ERVLB4	oneside	chr2	40894129	40895435	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01794	ENSG00000233128	126677	HNRNPA1P57	ENSG00000237442	248345	None	None
HERVL_2p22.1b	HERV	HERVL	unknown	chr2	41268984	41270406	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA1P57	ENSG00000237442	111429	AC009413.3	ENSG00000287145	445727	None	None
HERVH_2p22.1	HERV	HERVH	prototype	chr2	41377833	41385713	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA1P57	ENSG00000237442	220278	AC009413.3	ENSG00000287145	330420	chr2:41381797-41381861	chr2:41378225-41378232,chr2:41378170-41378177,chr2:41378179-41378184,chr2:41378195-41378198
HUERSP3_2p22.1	HERV	HUERSP3	prototype	chr2	41493320	41502091	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA1P57	ENSG00000237442	335765	AC009413.3	ENSG00000287145	214042	None	None
PABLB_2p21	HERV	PABLB	internal	chr2	41781511	41782685	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009413.3	ENSG00000287145	49900	LDHAP3	ENSG00000236090	37062	None	None
MER4_2p21	HERV	MER4	prototype	chr2	42773889	42783034	+	noncoding	HAAO	protein_coding	ANTISENSE	ENSG00000162882	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2p21	HERV	ERVLB4	prototype	chr2	42882051	42891594	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC098824.1	ENSG00000232202	54434	AC016735.1	ENSG00000224739	109761	chr2:42881732-42882061,chr2:42882746-42883109	None
HERVL40_2p21	HERV	HERVL40	oneside	chr2	43435842	43437785	+	noncoding	THADA	protein_coding	ANTISENSE	ENSG00000115970	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2p21a	HERV	HERVH	prototype	chr2	44018447	44024529	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC019129.1	ENSG00000219391	41365	LRPPRC	ENSG00000138095	22458	None	None
MER61_2p21	HERV	MER61	internal	chr2	44444649	44446040	+	noncoding	CAMKMT	protein_coding	SENSE	ENSG00000143919	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:44445694-44445696
HERVH_2p21b	HERV	HERVH	prototype	chr2	45034461	45040152	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01121	ENSG00000205054	124664	AC093702.1	ENSG00000231156	20793	None	None
HERVH_2p16.3a	HERV	HERVH	prototype	chr2	47582656	47591646	-	noncoding	MSH2	protein_coding	ANTISENSE	ENSG00000095002	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_2p16.3	HERV	MER101	internal	chr2	47660068	47660924	+	noncoding	MSH2	protein_coding	SENSE	ENSG00000095002	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_2p16.3a	HERV	MER34B	internal	chr2	47662380	47663103	+	noncoding	MSH2	protein_coding	SENSE	ENSG00000095002	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
MER34B_2p16.3b	HERV	MER34B	internal	chr2	47689825	47690661	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079250.1	ENSG00000230979	55	MSH2	ENSG00000095002	26679	None	None
ERVLB4_2p16.3	HERV	ERVLB4	oneside	chr2	47868611	47870210	+	noncoding	FBXO11	protein_coding	ANTISENSE	ENSG00000138081	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p16.3a	HERV	ERVLE	oneside	chr2	48045871	48047835	+	noncoding	AC092650.1	lncRNA	ANTISENSE	ENSG00000230773	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:48046878-48046881,chr2:48047356-48047370
MER41_2p16.3a	HERV	MER41	oneside	chr2	48051040	48052882	-	noncoding	AC092650.1	lncRNA	SENSE	ENSG00000230773	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_2p16.3b	HERV	MER41	oneside	chr2	48058827	48062129	-	noncoding	AC092650.1	lncRNA	SENSE	ENSG00000230773	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p16.3b	HERV	ERVLE	internal	chr2	48062145	48064068	+	noncoding	AC092650.1	lncRNA	ANTISENSE	ENSG00000230773	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_2p16.3	HERV	HML3	prototype	chr2	48384541	48390655	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FOXN2	ENSG00000170802	5246	AC093635.1	ENSG00000272663	49388	None	None
ERV316A3_2p16.3a	HERV	ERV316A3	oneside	chr2	49376197	49378507	+	noncoding	AC009975.1,AC009975.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000282890,ENSG00000282998	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2p16.3a	HERV	HERVL	prototype	chr2	49542610	49549244	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC009971.1	ENSG00000282828	14144	AC009975.2	ENSG00000282998	90714	None	None
ERVLE_2p16.3c	HERV	ERVLE	internal	chr2	49821645	49822493	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P13	ENSG00000234253	56130	AC009971.1	ENSG00000282828	226519	None	None
ERVLE_2p16.3d	HERV	ERVLE	internal	chr2	49828053	49831152	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P13	ENSG00000234253	47471	AC009971.1	ENSG00000282828	232927	None	None
ERVLE_2p16.3e	HERV	ERVLE	internal	chr2	49856316	49859036	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009971.1	ENSG00000282828	261190	RPL7P13	ENSG00000234253	19587	None	None
HUERSP1_2p16.3	HERV	HUERSP1	oneside	chr2	49877002	49878606	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009971.1	ENSG00000282828	281876	RPL7P13	ENSG00000234253	17	None	None
HERVL_2p16.3b	HERV	HERVL	internal	chr2	51120766	51122489	+	noncoding	NRXN1,AC007402.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000179915,ENSG00000231918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2p16.3b	HERV	ERV316A3	oneside	chr2	51225593	51229897	-	noncoding	AC007402.1	lncRNA	ANTISENSE	ENSG00000231918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_2p16.3	HERV	ERVL	oneside	chr2	51385643	51387388	-	noncoding	AC007402.1	lncRNA	ANTISENSE	ENSG00000231918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_2p16.3c	HERV	MER34B	internal	chr2	51448938	51449916	+	noncoding	AC007402.1,AC007402.2	lncRNA,lncRNA	SENSE,SENSE	ENSG00000231918,ENSG00000287867	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_2p16.3c	HERV	HERVL	oneside	chr2	51611796	51614555	-	noncoding	AC007402.1	lncRNA	ANTISENSE	ENSG00000231918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p16.3f	HERV	ERVLE	internal	chr2	51654213	51655092	+	noncoding	AC007402.1	lncRNA	SENSE	ENSG00000231918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p16.3g	HERV	ERVLE	internal	chr2	51919928	51922126	-	noncoding	AC007402.1	lncRNA	ANTISENSE	ENSG00000231918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2p16.3d	HERV	HERVL	oneside	chr2	51946369	51948478	-	noncoding	AC007402.1	lncRNA	ANTISENSE	ENSG00000231918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2p16.3b	HERV	HERVH	oneside	chr2	52022984	52027600	-	noncoding	AC007402.1	lncRNA	ANTISENSE	ENSG00000231918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_2p16.3	HERV	MER4	internal	chr2	52127840	52129514	+	noncoding	AC007402.1	lncRNA	SENSE	ENSG00000231918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_2p16.3c	HERV	MER41	internal	chr2	52129538	52131381	+	noncoding	AC007402.1	lncRNA	SENSE	ENSG00000231918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_2p16.3a	HERV	PABLA	oneside	chr2	52263746	52267924	+	noncoding	AC007402.1	lncRNA	SENSE	ENSG00000231918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p16.3h	HERV	ERVLE	internal	chr2	52267977	52269563	+	noncoding	AC007402.1	lncRNA	SENSE	ENSG00000231918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_2p16.3b	HERV	PABLA	oneside	chr2	52287346	52290632	-	noncoding	AC007402.1	lncRNA	ANTISENSE	ENSG00000231918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_2p16.3c	HERV	PABLA	oneside	chr2	52290797	52292090	-	noncoding	AC007402.1	lncRNA	ANTISENSE	ENSG00000231918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_2p16.3	HERV	HERVE	prototype	chr2	52431073	52437869	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007402.1	ENSG00000231918	23156	AC139712.2	ENSG00000225842	36204	None	None
HERVL_2p16.2	HERV	HERVL	prototype	chr2	52649482	52656060	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4431	ENSG00000264975	46462	FTH1P6	ENSG00000233083	19404	None	None
ERVLE_2p16.2	HERV	ERVLE	internal	chr2	52761475	52763251	+	noncoding	AC010967.1	lncRNA	ANTISENSE	ENSG00000228033	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2p16.2	HERV	ERV316A3	internal	chr2	52796745	52797736	-	noncoding	AC010967.1	lncRNA	SENSE	ENSG00000228033	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_2p16.2	HERV	MER4B	internal	chr2	53074582	53076244	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069157.2	ENSG00000251942	394203	AC010967.1	ENSG00000228033	113130	None	None
HERVW_2p16.2	HERV	HERVW	prototype	chr2	53756643	53761425	+	noncoding	ASB3	protein_coding	ANTISENSE	ENSG00000115239	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_2p16.2	HERV	HERVH	oneside	chr2	54506902	54509542	-	noncoding	SPTBN1	protein_coding	ANTISENSE	ENSG00000115306	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2p16.1a	HERV	ERV316A3	oneside	chr2	55625410	55626717	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPP4R3B	ENSG00000275052	6530	PNPT1	ENSG00000138035	7344	None	None
MER101_2p16.1	HERV	MER101	internal	chr2	55846177	55849663	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EFEMP1	ENSG00000115380	16304	PNPT1	ENSG00000138035	152314	None	None
ERVLB4_2p16.1a	HERV	ERVLB4	internal	chr2	55972226	55975858	-	noncoding	AC011306.1,MIR217HG	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000272180,ENSG00000226702	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_2p16.1	HERV	HUERSP3B	oneside	chr2	56158620	56160407	+	noncoding	AC011306.1,AC007744.1	lncRNA,lncRNA	SENSE,SENSE	ENSG00000272180,ENSG00000271894	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2p16.1b	HERV	ERV316A3	oneside	chr2	56507653	56509259	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP63	ENSG00000231570	241041	CCDC85A	ENSG00000055813	121481	None	None
ERVLB4_2p16.1b	HERV	ERVLB4	prototype	chr2	56532238	56534178	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP63	ENSG00000231570	216122	CCDC85A	ENSG00000055813	146066	None	None
HERVL_2p16.1	HERV	HERVL	prototype	chr2	56616914	56624016	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC85A	ENSG00000055813	230742	PPIAP63	ENSG00000231570	126284	None	None
ERV316A3_2p16.1c	HERV	ERV316A3	oneside	chr2	56639933	56641259	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP63	ENSG00000231570	109041	CCDC85A	ENSG00000055813	253761	None	None
ERV316A3_2p16.1d	HERV	ERV316A3	internal	chr2	56667413	56668360	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC85A	ENSG00000055813	281241	PPIAP63	ENSG00000231570	81940	None	None
HML3_2p16.1	HERV	HML3	prototype	chr2	56719160	56724218	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC85A	ENSG00000055813	332988	PPIAP63	ENSG00000231570	26082	None	None
HML5_2p16.1	HERV	HML5	prototype	chr2	56980472	56985403	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010738.1	ENSG00000271115	62947	PPIAP63	ENSG00000231570	229909	None	None
MER41_2p16.1	HERV	MER41	internal	chr2	57183287	57184556	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010738.1	ENSG00000271115	133951	AC132153.1	ENSG00000285755	105092	None	None
HERVH_2p16.1a	HERV	HERVH	unknown	chr2	57192263	57198696	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010738.1	ENSG00000271115	142927	AC132153.1	ENSG00000285755	90952	None	None
HERVH_2p16.1b	HERV	HERVH	prototype	chr2	57227242	57235205	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010738.1	ENSG00000271115	177906	AC132153.1	ENSG00000285755	54443	None	None
ERVLB4_2p16.1c	HERV	ERVLB4	internal	chr2	57443298	57446445	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068276.1	ENSG00000270569	12605	AC073875.1	ENSG00000212168	98090	chr2:57444017-57444654	chr2:57444576-57444591,chr2:57444643-57444653,chr2:57443921-57443932
ERV316A3_2p16.1e	HERV	ERV316A3	prototype	chr2	57695895	57699454	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ACTG1P22	ENSG00000271615	55974	AC073875.1	ENSG00000212168	151296	None	chr2:57699178-57699187,chr2:57699194-57699202
ERVLB4_2p16.1d	HERV	ERVLB4	oneside	chr2	58005706	58007331	+	noncoding	VRK2	protein_coding	SENSE	ENSG00000028116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2p16.1c	HERV	HERVH	prototype	chr2	58113432	58119130	-	noncoding	VRK2	protein_coding	ANTISENSE	ENSG00000028116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p16.1a	HERV	ERVLE	internal	chr2	58265223	58268227	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EIF3FP3	ENSG00000233426	12698	LINC01795	ENSG00000225226	7305	None	None
HERVH_2p16.1d	HERV	HERVH	prototype	chr2	58314169	58319388	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01795	ENSG00000225226	17352	LINC01122	ENSG00000233723	108411	None	None
ERVLE_2p16.1b	HERV	ERVLE	oneside	chr2	58388120	58390835	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01795	ENSG00000225226	91303	LINC01122	ENSG00000233723	36964	None	None
HML4_2p16.1	HERV	HML4	oneside	chr2	59172957	59175135	+	noncoding	AC007092.1	lncRNA	SENSE	ENSG00000285673	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2p16.1e	HERV	HERVH	prototype	chr2	60417435	60422485	+	noncoding	AC007381.1	lncRNA	ANTISENSE	ENSG00000228590	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_2p16.1	HERV	HERVL18	prototype	chr2	60743759	60746878	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PAPOLG	ENSG00000115421	9375	ATP1B3P1	ENSG00000271707	8044	None	None
MER34B_2p15	HERV	MER34B	oneside	chr2	61654211	61655558	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108039.1	ENSG00000213486	54518	RNU6-1145P	ENSG00000206973	48489	None	None
ERV316A3_2p15a	HERV	ERV316A3	prototype	chr2	61717182	61719545	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS24P7	ENSG00000227361	83598	AC108039.1	ENSG00000213486	6204	None	None
ERVL_2p15	HERV	ERVL	oneside	chr2	61863375	61865287	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107081.3	ENSG00000277498	3077	CCT4	ENSG00000115484	2798	None	None
HERVFH21_2p15	HERV	HERVFH21	oneside	chr2	61924294	61925700	-	noncoding	COMMD1	protein_coding	ANTISENSE	ENSG00000173163	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_2p15	HERV	MER4B	oneside	chr2	61936783	61944535	-	noncoding	COMMD1	protein_coding	ANTISENSE	ENSG00000173163	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_2p15	HERV	MER4	oneside	chr2	61944555	61946123	-	noncoding	COMMD1	protein_coding	ANTISENSE	ENSG00000173163	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL32_2p15a	HERV	HERVL32	oneside	chr2	63297035	63299755	-	noncoding	WDPCP	protein_coding	SENSE	ENSG00000143951	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_2p15	HERV	HUERSP3B	oneside	chr2	63299756	63302947	+	noncoding	WDPCP	protein_coding	ANTISENSE	ENSG00000143951	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL32_2p15b	HERV	HERVL32	internal	chr2	63303116	63303770	-	noncoding	WDPCP	protein_coding	SENSE	ENSG00000143951	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2p15b	HERV	ERV316A3	prototype	chr2	63345145	63346595	+	noncoding	WDPCP	protein_coding	ANTISENSE	ENSG00000143951	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11_2p14	HERV	HERVK11	prototype	chr2	63988445	63997140	+	noncoding	VPS54	protein_coding	ANTISENSE	ENSG00000143952	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_2p14	HERV	MER101	internal	chr2	64069026	64070451	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VPS54	ENSG00000143952	49598	AC012368.2	ENSG00000228079	15902	None	None
HERVH_2p14a	HERV	HERVH	prototype	chr2	64074809	64079933	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012368.2	ENSG00000228079	6420	VPS54	ENSG00000143952	55381	None	None
HERVH_2p14b	HERV	HERVH	prototype	chr2	64252414	64257646	+	noncoding	AC012368.1	lncRNA	SENSE	ENSG00000225889	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:64252792-64252794
HERVE_2p14a	HERV	HERVE	oneside	chr2	64887412	64891023	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02245	ENSG00000237638	10817	LINC01800	ENSG00000234572	23786	None	None
HERVE_2p14b	HERV	HERVE	oneside	chr2	64897102	64899872	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02245	ENSG00000237638	1968	LINC01800	ENSG00000234572	33476	None	None
ERVLE_2p14a	HERV	ERVLE	internal	chr2	64961123	64961913	+	noncoding	LINC02245	lncRNA	ANTISENSE	ENSG00000237638	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_2p14	HERV	HERVIP10FH	oneside	chr2	65044235	65046931	-	noncoding	LINC02245,LINC02576	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000237638,ENSG00000232613	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p14b	HERV	ERVLE	internal	chr2	65053217	65053895	+	noncoding	LINC02245	lncRNA	ANTISENSE	ENSG00000237638	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2p14	HERV	ERV316A3	oneside	chr2	65952925	65958811	-	noncoding	AC007389.1	lncRNA	ANTISENSE	ENSG00000204929	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2p14c	HERV	HERVH	prototype	chr2	66243889	66249502	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC118345.1	ENSG00000227293	7676	AC092669.1	ENSG00000225815	77847	None	None
HERVH_2p14d	HERV	HERVH	prototype	chr2	67331517	67337601	+	noncoding	LINC01829	lncRNA	ANTISENSE	ENSG00000236780	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:67331875-67331898,chr2:67336771-67336780
HML1_2p13.3	HERV	HML1	oneside	chr2	68606478	68607524	-	noncoding	APLF	protein_coding	ANTISENSE	ENSG00000169621	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2p13.3	HERV	ERV316A3	prototype	chr2	69255819	69265142	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC112230.1	ENSG00000271597	3455	GFPT1	ENSG00000198380	54627	None	None
HERVH_2p13.3a	HERV	HERVH	prototype	chr2	69443011	69449341	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AAK1	ENSG00000115977	8656	NFU1	ENSG00000169599	5383	None	None
LTR25_2p13.3	HERV	LTR25	internal	chr2	69790238	69794493	-	noncoding	ANXA4	protein_coding	ANTISENSE	ENSG00000196975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:69790679-69790856	chr2:69794155-69794164
HUERSP3_2p13.3	HERV	HUERSP3	internal	chr2	69794782	69798802	-	noncoding	ANXA4	protein_coding	ANTISENSE	ENSG00000196975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_2p13.3	HERV	HERVL18	oneside	chr2	70201614	70204962	+	coding	C2orf42	protein_coding	ANTISENSE	ENSG00000115998	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2p13.3b	HERV	HERVH	prototype	chr2	70620550	70626409	+	noncoding	ADD2	protein_coding	ANTISENSE	ENSG00000075340	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_2p13.3a	HERV	HERVE	internal	chr2	71020400	71024471	+	noncoding	AC007881.2,OR7E91P	lncRNA,transcribed_unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000236469,ENSG00000205847	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVE_2p13.3b	HERV	HERVE	oneside	chr2	71046155	71050605	+	noncoding	AC007881.2	lncRNA	ANTISENSE	ENSG00000236469	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:71050171-71050185,chr2:71050186-71050193,chr2:71050195-71050214
HERVH_2p13.3c	HERV	HERVH	prototype	chr2	71086360	71090997	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MCEE	ENSG00000124370	18687	NAGK	ENSG00000124357	6552	None	None
HERVH_2p13.3d	HERV	HERVH	prototype	chr2	71157778	71165609	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007881.1	ENSG00000233870	12978	MPHOSPH10	ENSG00000124383	7677	None	None
HML5_2p13.2	HERV	HML5	prototype	chr2	71388099	71395817	+	noncoding	ZNF638	protein_coding	SENSE	ENSG00000075292	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p13.2a	HERV	ERVLE	internal	chr2	71444089	71446102	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF638	ENSG00000075292	9020	DYSF	ENSG00000135636	7620	None	None
ERVLE_2p13.2b	HERV	ERVLE	oneside	chr2	73195609	73199267	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAB11FIP5	ENSG00000135631	38888	NOTO	ENSG00000214513	3307	None	None
ERVLE_2p13.1	HERV	ERVLE	internal	chr2	73362111	73368119	+	noncoding	AC074008.2	lncRNA	ANTISENSE	ENSG00000285068	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_2p13.1	HERV	PRIMA4	internal	chr2	73630469	73632369	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ALMS1	ENSG00000116127	5303	NAT8	ENSG00000144035	8354	None	None
PABLB_2p13.1	HERV	PABLB	internal	chr2	73752093	73760464	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092653.1	ENSG00000273245	1307	AC092653.2	ENSG00000280037	805	None	None
HERVH_2p12a	HERV	HERVH	prototype	chr2	75213731	75219537	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP57	ENSG00000236167	236457	TACR1	ENSG00000115353	14211	None	None
ERVLE_2p12a	HERV	ERVLE	internal	chr2	75361114	75362892	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TACR1	ENSG00000115353	161594	GAPDHP57	ENSG00000236167	93102	None	None
ERVLE_2p12b	HERV	ERVLE	internal	chr2	75375080	75376803	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TACR1	ENSG00000115353	175560	GAPDHP57	ENSG00000236167	79191	None	None
HERVFRD_2p12a	HERV	HERVFRD	oneside	chr2	75388168	75391565	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP57	ENSG00000236167	64429	TACR1	ENSG00000115353	188648	None	None
HERVL_2p12a	HERV	HERVL	prototype	chr2	75392317	75397169	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP57	ENSG00000236167	58825	TACR1	ENSG00000115353	192797	None	None
HERVW_2p12a	HERV	HERVW	prototype	chr2	75871690	75879498	+	noncoding	AC110614.1	lncRNA	SENSE	ENSG00000287474	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:75871896-75871921
ERVLE_2p12c	HERV	ERVLE	internal	chr2	76386329	76388577	-	noncoding	AC073091.3	lncRNA	ANTISENSE	ENSG00000287172	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2p12b	HERV	HERVH	prototype	chr2	76573625	76579704	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP164	ENSG00000251947	15709	RN7SKP203	ENSG00000200488	128215	None	chr2:76579672-76579685
HERVL_2p12b	HERV	HERVL	internal	chr2	76596620	76598412	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP164	ENSG00000251947	942	AC068616.2	ENSG00000287026	34953	None	None
ERVL_2p12a	HERV	ERVL	internal	chr2	76662223	76662798	-	noncoding	AC068616.2	lncRNA	SENSE	ENSG00000287026	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2p12c	HERV	HERVH	prototype	chr2	77088247	77094030	+	noncoding	LRRTM4	protein_coding	ANTISENSE	ENSG00000176204	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:77090836-77091065	chr2:77088673-77088704,chr2:77089274-77089294
HERVK11_2p12	HERV	HERVK11	oneside	chr2	77112694	77115602	-	coding	LRRTM4	protein_coding	SENSE	ENSG00000176204	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2p12a	HERV	ERVLB4	internal	chr2	77507725	77508485	+	noncoding	LRRTM4	protein_coding	ANTISENSE	ENSG00000176204	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_2p12b	HERV	HERVFRD	prototype	chr2	77777744	77780459	-	noncoding	AC012494.1	lncRNA	SENSE	ENSG00000227088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_2p12c	HERV	HERVFRD	prototype	chr2	77830855	77836422	+	noncoding	AC012494.1	lncRNA	ANTISENSE	ENSG00000227088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2p12d	HERV	HERVH	prototype	chr2	77965140	77970850	+	noncoding	AC012494.1	lncRNA	ANTISENSE	ENSG00000227088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_2p12	HERV	HERVL18	prototype	chr2	78105751	78112413	-	noncoding	AC012494.1,AC012494.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000227088,ENSG00000229494	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVL_2p12b	HERV	ERVL	internal	chr2	78283871	78285104	+	noncoding	AC012494.1	lncRNA	ANTISENSE	ENSG00000227088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_2p12	HERV	MER61	prototype	chr2	78672431	78678070	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092604.1	ENSG00000286260	202643	AC092660.1	ENSG00000234877	73025	None	None
HERVH_2p12e	HERV	HERVH	prototype	chr2	78758203	78764267	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092660.1	ENSG00000234877	158797	AC092604.1	ENSG00000286260	116446	None	None
HUERSP2_2p12	HERV	HUERSP2	prototype	chr2	78791820	78796107	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092604.1	ENSG00000286260	84606	AC092660.1	ENSG00000234877	192414	None	None
HERVH_2p12f	HERV	HERVH	prototype	chr2	79051400	79057072	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	REG3G	ENSG00000143954	22895	REG1B	ENSG00000172023	27951	None	None
HERVH48_2p12	HERV	HERVH48	prototype	chr2	79092033	79099634	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	REG1A	ENSG00000115386	20728	REG1B	ENSG00000172023	4014	None	None
MER4B_2p12a	HERV	MER4B	internal	chr2	79128722	79130174	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	REG1CP	ENSG00000204787	5329	REG1A	ENSG00000115386	5313	None	None
HERVW_2p12b	HERV	HERVW	prototype	chr2	79163171	79170353	-	noncoding	AC011754.1	lncRNA	ANTISENSE	ENSG00000224879	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_2p12a	HERV	MER4	oneside	chr2	79200412	79202283	-	noncoding	CTNNA2	protein_coding	ANTISENSE	ENSG00000066032	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:79200814-79200995	None
HERVH_2p12g	HERV	HERVH	prototype	chr2	79211346	79217707	-	noncoding	CTNNA2	protein_coding	ANTISENSE	ENSG00000066032	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p12d	HERV	ERVLE	internal	chr2	79501564	79504838	+	noncoding	CTNNA2,CTNNA2-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000066032,ENSG00000229385	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2p12c	HERV	HERVL	internal	chr2	79549367	79550201	-	noncoding	CTNNA2	protein_coding	ANTISENSE	ENSG00000066032	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_2p12b	HERV	MER4B	internal	chr2	79695908	79696795	-	noncoding	CTNNA2	protein_coding	ANTISENSE	ENSG00000066032	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_2p12c	HERV	ERVL	oneside	chr2	80068942	80070126	-	noncoding	CTNNA2	protein_coding	ANTISENSE	ENSG00000066032	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2p12d	HERV	HERVL	prototype	chr2	80175594	80182524	-	noncoding	CTNNA2	protein_coding	ANTISENSE	ENSG00000066032	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p12e	HERV	ERVLE	internal	chr2	80665059	80667672	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012355.1	ENSG00000230975	31716	CTNNA2	ENSG00000066032	16198	None	None
ERVLE_2p12f	HERV	ERVLE	internal	chr2	80697269	80699590	+	noncoding	AC012355.1	lncRNA	ANTISENSE	ENSG00000230975	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_2p12h	HERV	HERVH	prototype	chr2	80875799	80880161	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105342.1	ENSG00000234429	314176	AC012355.1	ENSG00000230975	5609	chr2:80879924-80880150	None
HUERSP3_2p12	HERV	HUERSP3	oneside	chr2	81387539	81390129	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105342.1	ENSG00000234429	186355	AC012075.1	ENSG00000231722	28594	None	None
HERVIP10F_2p12	HERV	HERVIP10F	prototype	chr2	81649960	81658684	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC013262.1	ENSG00000233444	7793	RNA5SP99	ENSG00000200890	153633	None	None
HERVL_2p12e	HERV	HERVL	oneside	chr2	81710634	81713680	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL201P	ENSG00000242118	253399	AC013262.1	ENSG00000233444	43906	None	None
HERVK14C_2p12	HERV	HERVK14C	prototype	chr2	82022661	82031279	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC079896.1	ENSG00000231781	16961	LYARP1	ENSG00000229560	237148	None	None
MER41_2p12	HERV	MER41	prototype	chr2	82129468	82132637	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079896.1	ENSG00000231781	123768	LYARP1	ENSG00000229560	135790	None	None
MER4_2p12b	HERV	MER4	oneside	chr2	82366031	82368877	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010105.1	ENSG00000237498	107948	AC105761.1	ENSG00000201311	58863	None	None
ERVLB4_2p12b	HERV	ERVLB4	internal	chr2	82460842	82461813	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105761.1	ENSG00000201311	153674	AC010105.1	ENSG00000237498	15012	None	None
ERVLE_2p12g	HERV	ERVLE	internal	chr2	82476538	82478547	-	noncoding	AC010105.1	lncRNA	SENSE	ENSG00000237498	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p12h	HERV	ERVLE	oneside	chr2	82496315	82497445	+	noncoding	AC010105.1	lncRNA	ANTISENSE	ENSG00000237498	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_2p12	HERV	HERVP71A	oneside	chr2	82778297	82780489	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC109638.1	ENSG00000226860	168320	MTND4P25	ENSG00000226700	34495	None	None
ERV316A3_2p11.2a	HERV	ERV316A3	internal	chr2	83115153	83116354	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138623.1	ENSG00000223977	102536	AC098817.1	ENSG00000286211	248645	None	None
HERVL_2p11.2a	HERV	HERVL	oneside	chr2	83159688	83162723	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138623.1	ENSG00000223977	56167	AC098817.1	ENSG00000286211	293180	None	None
ERVLE_2p11.2a	HERV	ERVLE	internal	chr2	83534618	83536100	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01809	ENSG00000232548	11116	RPL37P10	ENSG00000224627	58856	None	None
HERVH_2p11.2a	HERV	HERVH	oneside	chr2	83788947	83792700	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016908.1	ENSG00000228225	238440	RNU6-1312P	ENSG00000199295	131105	None	None
HERVH_2p11.2b	HERV	HERVH	oneside	chr2	83792810	83794480	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016908.1	ENSG00000228225	236660	RNU6-1312P	ENSG00000199295	134968	None	None
HERVFC1_2p11.2	HERV	HERVFC1	prototype	chr2	83873933	83879494	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016908.1	ENSG00000228225	151646	RNU6-1312P	ENSG00000199295	216091	chr2:83879144-83879428	None
MER41_2p11.2	HERV	MER41	prototype	chr2	84464407	84470759	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DNAH6	ENSG00000115423	45696	SUCLG1	ENSG00000163541	4362	None	None
HML1_2p11.2	HERV	HML1	prototype	chr2	84470760	84477426	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DNAH6	ENSG00000115423	39029	SUCLG1	ENSG00000163541	10715	None	None
MER101_2p11.2	HERV	MER101	internal	chr2	84923159	84923605	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022210.1	ENSG00000213399	6499	AC022210.2	ENSG00000287625	2414	None	None
ERV316A3_2p11.2b	HERV	ERV316A3	oneside	chr2	85111587	85115113	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LSM3P3	ENSG00000225787	8893	TCF7L1	ENSG00000152284	18279	None	None
MER4_2p11.2a	HERV	MER4	oneside	chr2	85378291	85382157	-	noncoding	ELMOD3	protein_coding	ANTISENSE	ENSG00000115459	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p11.2b	HERV	ERVLE	internal	chr2	85651526	85652725	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SFTPB	ENSG00000168878	4589	USP39	ENSG00000168883	2243	None	None
ERVLE_2p11.2c	HERV	ERVLE	internal	chr2	86275100	86278417	+	noncoding	REEP1	protein_coding	ANTISENSE	ENSG00000068615	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2p11.2d	HERV	ERVLE	internal	chr2	86392598	86393940	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KDM3A	ENSG00000115548	46707	AC009408.2	ENSG00000251974	28333	None	None
HERVE_2p11.2	HERV	HERVE	prototype	chr2	87203473	87205281	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC083899.2	ENSG00000233671	15832	AC083899.1	ENSG00000204745	6844	None	None
ERVLB4_2p11.2a	HERV	ERVLB4	internal	chr2	87381965	87383077	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068279.1	ENSG00000224881	1198	LINC01943	ENSG00000280721	56446	None	None
ERVLB4_2p11.2b	HERV	ERVLB4	oneside	chr2	87862992	87864698	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RGPD2	ENSG00000185304	37040	NDUFB4P7	ENSG00000225428	103911	None	None
HUERSP2_2p11.2	HERV	HUERSP2	internal	chr2	87866475	87867337	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RGPD2	ENSG00000185304	40523	NDUFB4P7	ENSG00000225428	101272	None	None
MER4_2p11.2b	HERV	MER4	oneside	chr2	87890622	87891970	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RGPD2	ENSG00000185304	64670	NDUFB4P7	ENSG00000225428	76639	None	None
ERV316A3_2p11.2c	HERV	ERV316A3	internal	chr2	88205171	88207766	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	THNSL2	ENSG00000144115	18535	MRPL45P1	ENSG00000232508	156929	None	None
ERVLE_2p11.2e	HERV	ERVLE	oneside	chr2	88221959	88223713	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPL45P1	ENSG00000232508	140982	THNSL2	ENSG00000144115	35323	None	None
ERVLE_2p11.2f	HERV	ERVLE	internal	chr2	88334895	88340398	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPL45P1	ENSG00000232508	24297	THNSL2	ENSG00000144115	148259	None	None
ERVLB4_2p11.2c	HERV	ERVLB4	internal	chr2	88419486	88422720	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1007P	ENSG00000252395	4482	AC012671.1	ENSG00000224291	5358	None	None
HERVL_2p11.2b	HERV	HERVL	internal	chr2	88581793	88582614	+	noncoding	EIF2AK3	protein_coding	ANTISENSE	ENSG00000172071	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_2p11.2	HERV	HERVFRD	prototype	chr2	88679963	88686725	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EIF2AK3-DT	ENSG00000234028	48142	AC062029.1	ENSG00000287686	3452	None	chr2:88680538-88680557,chr2:88681522-88681527
MER4_2p11.2c	HERV	MER4	oneside	chr2	88717214	88722474	-	noncoding	RPIA	protein_coding	ANTISENSE	ENSG00000153574	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_2p11.2d	HERV	MER4	oneside	chr2	88722641	88724123	-	noncoding	RPIA	protein_coding	ANTISENSE	ENSG00000153574	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2p11.2c	HERV	HERVH	oneside	chr2	89050122	89056967	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGKV1-13	ENSG00000253497	3656	IGKV2-14	ENSG00000253265	21043	None	None
ERVLE_2p11.2g	HERV	ERVLE	internal	chr2	90020655	90021281	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGKV6D-21	ENSG00000225523	286	IGKV1D-22	ENSG00000253365	9471	None	None
ERVLE_2p11.2h	HERV	ERVLE	internal	chr2	90068706	90069348	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGKV6D-41	ENSG00000211626	314	IGKV2D-18	ENSG00000254220	15334	None	None
HERVH_2p11.2d	HERV	HERVH	oneside	chr2	90143601	90150444	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGKV1D-13	ENSG00000276566	3629	IGKV2D-14	ENSG00000254292	21037	None	None
ERVLB4_2p11.2d	HERV	ERVLB4	internal	chr2	90273861	90274973	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGKV3D-7	ENSG00000228325	38491	AC233263.2	ENSG00000275490	34257	None	None
ERVLB4_2p11.2e	HERV	ERVLB4	internal	chr2	91541733	91542845	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC233266.1	ENSG00000230964	35633	AC233263.6	ENSG00000281904	1174034	None	None
HERVL_2p11.1a	HERV	HERVL	prototype	chr2	91819227	91823296	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGKV1OR2-1	ENSG00000235235	979	ABCD1P5	ENSG00000214330	17305	None	None
ERV316A3_2p11.1a	HERV	ERV316A3	internal	chr2	91868944	91870258	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC127391.1	ENSG00000237085	9463	PABPC1P6	ENSG00000227497	7711	None	None
ERV316A3_2p11.1b	HERV	ERV316A3	oneside	chr2	91873093	91874655	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC127391.1	ENSG00000237085	13612	PABPC1P6	ENSG00000227497	3314	None	None
HERVL_2p11.1b	HERV	HERVL	prototype	chr2	92029468	92033543	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGKV1OR2-2	ENSG00000223816	979	AC128677.1	ENSG00000235147	22347	None	None
HERVL_2q11.1	HERV	HERVL	prototype	chr2	94260048	94264073	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL845331.3	ENSG00000261522	311903	AC026273.1	ENSG00000286156	51669	None	None
ERVLB4_2q11.1a	HERV	ERVLB4	internal	chr2	95122751	95123846	-	noncoding	MRPS5	protein_coding	SENSE	ENSG00000144029	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q11.1b	HERV	ERVLB4	internal	chr2	95126905	95129136	-	noncoding	MRPS5	protein_coding	SENSE	ENSG00000144029	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q11.1a	HERV	ERVLE	internal	chr2	95314435	95316267	-	noncoding	KCNIP3	protein_coding	ANTISENSE	ENSG00000115041	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q11.1b	HERV	ERVLE	internal	chr2	95393325	95394536	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCNIP3	ENSG00000115041	7248	FAHD2A	ENSG00000115042	8172	None	None
HUERSP1_2q11.2	HERV	HUERSP1	prototype	chr2	96209232	96212733	+	noncoding	STARD7-AS1	lncRNA	SENSE	ENSG00000204685	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_2q11.2	HERV	HERVW	prototype	chr2	96217144	96223328	-	noncoding	STARD7-AS1	lncRNA	ANTISENSE	ENSG00000204685	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q11.2a	HERV	ERVLE	internal	chr2	96229340	96233225	-	noncoding	STARD7-AS1	lncRNA	ANTISENSE	ENSG00000204685	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q11.2b	HERV	ERVLE	internal	chr2	96235418	96238331	+	noncoding	STARD7-AS1	lncRNA	SENSE	ENSG00000204685	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q11.2c	HERV	ERVLE	internal	chr2	96574676	96576997	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARID5A	ENSG00000196843	22042	KANSL3	ENSG00000114982	16173	None	None
MER41_2q11.2	HERV	MER41	oneside	chr2	98047751	98053992	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM131	ENSG00000075568	51803	VWA3B	ENSG00000168658	33124	None	None
MER61_2q11.2	HERV	MER61	prototype	chr2	98429595	98437221	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CNGA3	ENSG00000144191	30994	INPP4A	ENSG00000040933	7633	None	None
PRIMA41_2q11.2	HERV	PRIMA41	internal	chr2	98752222	98756736	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MGAT4A	ENSG00000071073	21090	LINC02611	ENSG00000226791	4362	None	None
MER4_2q11.2a	HERV	MER4	oneside	chr2	99266312	99268296	+	noncoding	AC079447.1	protein_coding	SENSE	ENSG00000241962	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_2q11.2	HERV	HML3	prototype	chr2	99270681	99278573	-	noncoding	AC079447.1	protein_coding	ANTISENSE	ENSG00000241962	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_2q11.2	HERV	HERVIP10F	oneside	chr2	99496719	99499719	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	REV1	ENSG00000135945	6684	AFF3	ENSG00000144218	45700	None	None
HARLEQUIN_2q11.2a	HERV	HARLEQUIN	internal	chr2	99500002	99502168	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	REV1	ENSG00000135945	9967	AFF3	ENSG00000144218	43251	None	None
HARLEQUIN_2q11.2b	HERV	HARLEQUIN	internal	chr2	99502475	99504032	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	REV1	ENSG00000135945	12440	AFF3	ENSG00000144218	41387	None	None
ERVLB4_2q11.2	HERV	ERVLB4	internal	chr2	100175931	100179071	+	noncoding	AFF3	protein_coding	ANTISENSE	ENSG00000144218	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q11.2	HERV	ERV316A3	oneside	chr2	100265606	100271342	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LONRF2	ENSG00000170500	533	LINC01104	ENSG00000232084	14122	chr2:100268907-100269079	None
HERVL74_2q11.2	HERV	HERVL74	oneside	chr2	100276117	100280003	+	noncoding	LONRF2	protein_coding	ANTISENSE	ENSG00000170500	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVK11_2q11.2	HERV	HERVK11	prototype	chr2	100361988	100365971	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012493.2	ENSG00000269383	4284	LONRF2	ENSG00000170500	39487	None	None
MER4_2q11.2b	HERV	MER4	prototype	chr2	100452698	100460596	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012493.1	ENSG00000238029	26591	NMS	ENSG00000204640	9886	None	None
HERVL_2q11.2	HERV	HERVL	prototype	chr2	100712063	100717660	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01868	ENSG00000234169	36025	AC092168.1	ENSG00000228488	4561	None	None
HERVK11D_2q11.2	HERV	HERVK11D	prototype	chr2	101237832	101245098	+	coding	TBC1D8	protein_coding	ANTISENSE	ENSG00000204634	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:101238559-101238560
LTR25_2q12.1	HERV	LTR25	internal	chr2	102408621	102413726	+	coding	SDR42E1P5	processed_pseudogene	SENSE	ENSG00000236785	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q12.1a	HERV	ERVLE	internal	chr2	102548638	102552825	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC9A2	ENSG00000115616	66728	SLC9A4	ENSG00000180251	14666	None	None
ERV316A3_2q12.1a	HERV	ERV316A3	oneside	chr2	102556205	102559853	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC9A2	ENSG00000115616	59700	SLC9A4	ENSG00000180251	22233	None	None
ERVLE_2q12.1b	HERV	ERVLE	internal	chr2	102559862	102561918	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC9A2	ENSG00000115616	57635	SLC9A4	ENSG00000180251	25890	None	None
ERVLE_2q12.1c	HERV	ERVLE	internal	chr2	102737932	102739320	+	noncoding	TMEM182	protein_coding	SENSE	ENSG00000170417	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2q12.1a	HERV	HERVL	prototype	chr2	102908553	102915165	-	noncoding	TMEM182	protein_coding	ANTISENSE	ENSG00000170417	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q12.1d	HERV	ERVLE	internal	chr2	103067202	103068681	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM182	ENSG00000170417	47302	AC073987.1	ENSG00000229209	41078	None	None
ERVLB4_2q12.1b	HERV	ERVLB4	tandem*	chr2	103379600	103384049	+	noncoding	AC011593.1	lncRNA	SENSE	ENSG00000286290	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_2q12.1	HERV	MER41	oneside	chr2	103469416	103470672	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092568.1	ENSG00000236596	23569	AC011593.1	ENSG00000286290	65704	None	None
HUERSP1_2q12.1	HERV	HUERSP1	internal	chr2	103476371	103480381	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092568.1	ENSG00000236596	13860	AC011593.1	ENSG00000286290	72659	None	None
ERVLB4_2q12.1a	HERV	ERVLB4	oneside	chr2	104181252	104184956	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096554.1	ENSG00000228968	34023	AHCYP3	ENSG00000233955	210046	None	None
HUERSP3B_2q12.1	HERV	HUERSP3B	oneside	chr2	104214451	104216134	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096554.1	ENSG00000228968	67222	AHCYP3	ENSG00000233955	178868	None	None
HERVL_2q12.1b	HERV	HERVL	prototype	chr2	104587419	104593985	-	coding	AC013402.3	lncRNA	ANTISENSE	ENSG00000236109	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q12.1e	HERV	ERVLE	internal	chr2	104722319	104726329	+	noncoding	AC068057.4	lncRNA	ANTISENSE	ENSG00000288565	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:104722978-104722980
ERV316A3_2q12.1b	HERV	ERV316A3	internal	chr2	105128819	105131658	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01918	ENSG00000226508	12455	MRPS9-AS1	ENSG00000231851	25783	None	None
ERVLE_2q12.1f	HERV	ERVLE	internal	chr2	105134089	105135321	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPS9-AS1	ENSG00000231851	31053	LINC01918	ENSG00000226508	8792	None	None
HERVH48_2q12.2	HERV	HERVH48	oneside	chr2	105968435	105969656	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ECRG4	ENSG00000119147	93590	AC009505.1	ENSG00000234162	6049	None	None
HARLEQUIN_2q12.2	HERV	HARLEQUIN	prototype	chr2	105979107	105986361	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ECRG4	ENSG00000119147	76885	AC009505.1	ENSG00000234162	16721	None	None
HML1_2q12.2	HERV	HML1	oneside	chr2	105989643	105992204	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009505.1	ENSG00000234162	27257	ECRG4	ENSG00000119147	71042	None	None
HERVK14C_2q12.2	HERV	HERVK14C	internal	chr2	105992199	105994175	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009505.1	ENSG00000234162	29813	ECRG4	ENSG00000119147	69071	None	None
HERVW_2q12.2	HERV	HERVW	prototype	chr2	106209214	106215676	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092106.2	ENSG00000273595	1099	RPL22P10	ENSG00000213295	31693	None	None
ERVLE_2q12.2	HERV	ERVLE	internal	chr2	106531260	106532155	-	noncoding	CD8B2,AC108868.2,AC108868.1	protein_coding,lncRNA,lncRNA	ANTISENSE,ANTISENSE,SENSE	ENSG00000254126,ENSG00000232001,ENSG00000231505	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q12.3a	HERV	ERVLE	internal	chr2	106746409	106748757	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ST6GAL2	ENSG00000144057	52843	EEF1A1P12	ENSG00000214199	47733	None	None
ERVLE_2q12.3b	HERV	ERVLE	internal	chr2	106790918	106794060	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ST6GAL2	ENSG00000144057	7540	EEF1A1P12	ENSG00000214199	92242	None	None
HERVL_2q12.3	HERV	HERVL	internal	chr2	106913396	106918092	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ST6GAL2	ENSG00000144057	26288	AC005040.2	ENSG00000286218	15647	None	None
ERV316A3_2q12.3a	HERV	ERV316A3	prototype	chr2	106967926	106974578	-	noncoding	AC005040.2	lncRNA	SENSE	ENSG00000286218	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q12.3a	HERV	ERVLB4	oneside	chr2	107424653	107427857	-	noncoding	LINC01885	lncRNA	SENSE	ENSG00000237880	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q12.3b	HERV	ERV316A3	internal	chr2	107614581	107615131	+	noncoding	LINC01885	lncRNA	ANTISENSE	ENSG00000237880	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_2q12.3	HERV	PABLA	internal	chr2	107617047	107620549	+	noncoding	LINC01885	lncRNA	ANTISENSE	ENSG00000237880	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q12.3b	HERV	ERVLB4	internal	chr2	107636812	107637958	-	noncoding	LINC01885	lncRNA	SENSE	ENSG00000237880	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q12.3c	HERV	ERVLB4	oneside	chr2	107759206	107761467	-	noncoding	GACAT1	lncRNA	ANTISENSE	ENSG00000232991	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_2q12.3	HERV	HML3	prototype	chr2	107942282	107948662	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC5A7	ENSG00000115665	37861	AC009963.3	ENSG00000235325	21034	None	None
ERV316A3_2q12.3c	HERV	ERV316A3	internal	chr2	108021564	108022094	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01593	ENSG00000231221	27106	SLC5A7	ENSG00000115665	7570	None	None
ERVLE_2q12.3c	HERV	ERVLE	internal	chr2	108047419	108048313	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01593	ENSG00000231221	887	SLC5A7	ENSG00000115665	33425	None	None
ERVLE_2q12.3d	HERV	ERVLE	internal	chr2	108105563	108106128	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01594	ENSG00000225328	60997	ACTP1	ENSG00000229890	6071	None	None
ERVLE_2q12.3e	HERV	ERVLE	internal	chr2	108174698	108176697	+	noncoding	LINC01594	lncRNA	ANTISENSE	ENSG00000225328	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q12.3d	HERV	ERV316A3	internal	chr2	108229967	108231578	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SULT1C3	ENSG00000196228	15617	SETD6P1	ENSG00000236877	3636	None	None
HUERSP3B_2q12.3	HERV	HUERSP3B	internal	chr2	108240388	108245565	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SULT1C3	ENSG00000196228	1630	SETD6P1	ENSG00000236877	14057	None	None
ERVLB4_2q12.3d	HERV	ERVLB4	internal	chr2	108273665	108276585	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	WASF1P1	ENSG00000227597	227	SULT1C3	ENSG00000196228	8314	None	None
MER4_2q12.3	HERV	MER4	oneside	chr2	108393697	108398883	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SMIM12P1	ENSG00000271284	24729	SULT1C4	ENSG00000198075	4708	None	None
HUERSP2_2q12.3	HERV	HUERSP2	oneside	chr2	108398884	108401531	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SULT1C4	ENSG00000198075	9895	SMIM12P1	ENSG00000271284	22081	None	None
HERVIP10F_2q12.3	HERV	HERVIP10F	oneside	chr2	108401530	108405283	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SULT1C4	ENSG00000198075	12541	SMIM12P1	ENSG00000271284	18329	None	None
HARLEQUIN_2q12.3	HERV	HARLEQUIN	prototype	chr2	108523896	108531463	+	noncoding	GCC2-AS1	lncRNA	ANTISENSE	ENSG00000214184	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_2q13	HERV	HUERSP1	prototype	chr2	109091456	109097422	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EDAR	ENSG00000135960	102084	AC133109.1	ENSG00000277628	26935	None	None
ERVLB4_2q13a	HERV	ERVLB4	oneside	chr2	109458529	109463559	-	noncoding	SH3RF3	protein_coding	ANTISENSE	ENSG00000172985	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q13	HERV	ERVLE	insert*	chr2	109651164	109654480	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011753.1	ENSG00000230603	10729	SOWAHC	ENSG00000198142	32174	None	None
ERVLB4_2q13b	HERV	ERVLB4	internal	chr2	109990095	109992460	-	noncoding	LINC01123	lncRNA	ANTISENSE	ENSG00000204588	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_2q13a	HERV	MER101	internal	chr2	110015316	110017552	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC013268.4	ENSG00000283283	4895	AC013268.2	ENSG00000229730	2715	None	None
HERVH_2q13	HERV	HERVH	oneside	chr2	110217884	110219194	+	noncoding	MTLN	protein_coding	ANTISENSE	ENSG00000175701	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_2q13b	HERV	MER101	internal	chr2	110353840	110356081	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC140479.7	ENSG00000283167	4899	AC140479.1	ENSG00000226991	2709	None	None
ERVLB4_2q13c	HERV	ERVLB4	internal	chr2	110379003	110381368	+	noncoding	LINC01106	lncRNA	ANTISENSE	ENSG00000175772	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_2q13	HERV	HERVE	prototype	chr2	111760570	111762379	+	noncoding	ANAPC1	protein_coding	ANTISENSE	ENSG00000153107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_2q13	HERV	HERVW	prototype	chr2	112039346	112044989	-	noncoding	AC093675.1	lncRNA	SENSE	ENSG00000286904	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q14.1a	HERV	ERVLE	oneside	chr2	112259253	112262683	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZC3H8	ENSG00000144161	4117	ZC3H6	ENSG00000188177	12914	None	None
HARLEQUIN_2q14.1	HERV	HARLEQUIN	oneside	chr2	112347167	112354003	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RGPD8	ENSG00000169629	14366	AC115115.1	ENSG00000236555	909	None	None
ERV316A3_2q14.1a	HERV	ERV316A3	oneside	chr2	112455599	112459611	+	noncoding	VINAC1P	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000283698	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q14.1b	HERV	ERV316A3	internal	chr2	112601737	112604332	+	noncoding	AC012442.3	lncRNA	SENSE	ENSG00000243389	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q14.1c	HERV	ERV316A3	internal	chr2	112605241	112606628	-	noncoding	AC012442.3	lncRNA	ANTISENSE	ENSG00000243389	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_2q14.1a	HERV	MER4	oneside	chr2	112849107	112853024	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079753.1	ENSG00000280228	4912	XIAPP3	ENSG00000180152	304	None	None
MER4_2q14.1b	HERV	MER4	oneside	chr2	112857065	112863541	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	XIAPP3	ENSG00000180152	2943	IL37	ENSG00000125571	49430	None	None
ERVLE_2q14.1b	HERV	ERVLE	internal	chr2	112969376	112971790	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDK8P2	ENSG00000227368	36205	IL36G	ENSG00000136688	1413	None	None
ERV316A3_2q14.1d	HERV	ERV316A3	oneside	chr2	112999149	113000464	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IL36A	ENSG00000136694	4995	AC016724.1	ENSG00000232090	3212	None	None
ERV316A3_2q14.1e	HERV	ERV316A3	oneside	chr2	113643838	113645005	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL078621.1	ENSG00000144158	12903	RABL2A	ENSG00000144134	442	None	None
ERVL_2q14.1	HERV	ERVL	oneside	chr2	113994716	113996825	-	noncoding	LINC01191	lncRNA	ANTISENSE	ENSG00000234199	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2q14.1	HERV	HERVL	oneside	chr2	114311239	114317016	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SEPHS1P7	ENSG00000231926	50013	RNU2-41P	ENSG00000222923	103109	None	None
ERVLB4_2q14.1a	HERV	ERVLB4	prototype	chr2	114373968	114380342	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU2-41P	ENSG00000222923	39783	SEPHS1P7	ENSG00000231926	112742	None	None
ERV316A3_2q14.1f	HERV	ERV316A3	oneside	chr2	115097871	115101670	-	noncoding	DPP10,AC093610.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000175497,ENSG00000286776	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_2q14.1	HERV	HERVFRD	prototype	chr2	115118915	115123788	-	noncoding	DPP10	protein_coding	ANTISENSE	ENSG00000175497	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_2q14.1	HERV	HERVIP10F	oneside	chr2	115189073	115194732	-	noncoding	DPP10	protein_coding	ANTISENSE	ENSG00000175497	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_2q14.1	HERV	HERVIP10FH	internal	chr2	115192568	115193480	-	noncoding	DPP10	protein_coding	ANTISENSE	ENSG00000175497	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_2q14.1a	HERV	MER61	prototype	chr2	115406933	115408459	-	noncoding	DPP10	protein_coding	ANTISENSE	ENSG00000175497	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q14.1c	HERV	ERVLE	internal	chr2	115735366	115737912	-	noncoding	DPP10	protein_coding	ANTISENSE	ENSG00000175497	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q14.1b	HERV	ERVLB4	internal	chr2	115953258	115955296	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016721.1	ENSG00000287451	12967	AC104408.1	ENSG00000271667	731922	None	None
ERVLB4_2q14.1c	HERV	ERVLB4	oneside	chr2	115966591	115967852	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016721.1	ENSG00000287451	26300	AC104408.1	ENSG00000271667	719366	None	None
ERV316A3_2q14.1g	HERV	ERV316A3	prototype	chr2	116098422	116100709	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016721.1	ENSG00000287451	158131	AC104408.1	ENSG00000271667	586509	None	None
PRIMA41_2q14.1	HERV	PRIMA41	internal	chr2	116158721	116161399	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104408.1	ENSG00000271667	525819	AC016721.1	ENSG00000287451	218430	None	None
HERVH_2q14.1a	HERV	HERVH	prototype	chr2	116183753	116189710	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104408.1	ENSG00000271667	497508	AC016721.1	ENSG00000287451	243462	None	None
HML3_2q14.1	HERV	HML3	prototype	chr2	116251352	116256139	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016721.1	ENSG00000287451	311061	AC104408.1	ENSG00000271667	431079	None	None
HERV9_2q14.1	HERV	HERV9	prototype	chr2	116282415	116289614	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016721.1	ENSG00000287451	342124	AC104408.1	ENSG00000271667	397604	None	None
ERV316A3_2q14.1h	HERV	ERV316A3	internal	chr2	116421964	116423932	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016721.1	ENSG00000287451	481673	AC104408.1	ENSG00000271667	263286	None	None
HERV3_2q14.1	HERV	HERV3	internal	chr2	116467844	116473211	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016721.1	ENSG00000287451	527553	AC104408.1	ENSG00000271667	214007	None	None
LTR57_2q14.1	HERV	LTR57	internal	chr2	116467981	116468754	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016721.1	ENSG00000287451	527690	AC104408.1	ENSG00000271667	218464	None	None
ERVLB4_2q14.1d	HERV	ERVLB4	oneside	chr2	116487282	116488672	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016721.1	ENSG00000287451	546991	AC104408.1	ENSG00000271667	198546	None	None
ERVLE_2q14.1d	HERV	ERVLE	internal	chr2	116491747	116492952	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016721.1	ENSG00000287451	551456	AC104408.1	ENSG00000271667	194266	None	None
ERV316A3_2q14.1i	HERV	ERV316A3	oneside	chr2	116599329	116601162	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104408.1	ENSG00000271667	86056	AC016721.1	ENSG00000287451	659038	None	None
HERVL66_2q14.1	HERV	HERVL66	prototype	chr2	116717117	116721589	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104408.1	ENSG00000271667	29730	AC062016.1	ENSG00000224869	4864	None	None
MER61_2q14.1b	HERV	MER61	prototype	chr2	116753992	116758985	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCYBP39	ENSG00000226341	2344	AC062016.2	ENSG00000235871	59101	None	None
MER101_2q14.1a	HERV	MER101	internal	chr2	116781094	116785334	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCYBP39	ENSG00000226341	29446	AC062016.2	ENSG00000235871	32752	None	None
HERVH_2q14.1b	HERV	HERVH	prototype	chr2	117130629	117135078	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO1P43	ENSG00000228898	103605	RNU7-190P	ENSG00000239185	4637	None	None
ERVLE_2q14.1e	HERV	ERVLE	internal	chr2	117183830	117185641	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC064856.1	ENSG00000286370	350746	AC092170.1	ENSG00000227291	2268	None	None
ERVLE_2q14.1f	HERV	ERVLE	internal	chr2	117186356	117186962	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092170.1	ENSG00000227291	4794	AC064856.1	ENSG00000286370	349425	None	None
ERVLE_2q14.1g	HERV	ERVLE	internal	chr2	117249218	117250085	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC064856.1	ENSG00000286370	286302	AC092170.1	ENSG00000227291	67656	None	None
HERVH_2q14.1c	HERV	HERVH	prototype	chr2	117278753	117284509	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092170.1	ENSG00000227291	97191	AC064856.1	ENSG00000286370	251878	None	None
ERV316A3_2q14.1j	HERV	ERV316A3	oneside	chr2	117292358	117294729	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092170.1	ENSG00000227291	110796	AC064856.1	ENSG00000286370	241658	None	None
MER101_2q14.1b	HERV	MER101	internal	chr2	117368978	117370114	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092170.1	ENSG00000227291	187416	AC064856.1	ENSG00000286370	166273	None	None
MER4B_2q14.1	HERV	MER4B	internal	chr2	117371344	117371879	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092170.1	ENSG00000227291	189782	AC064856.1	ENSG00000286370	164508	None	None
HUERSP3_2q14.1	HERV	HUERSP3	prototype	chr2	117466492	117471190	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC064856.1	ENSG00000286370	65197	AC092170.1	ENSG00000227291	284930	None	None
ERV316A3_2q14.1k	HERV	ERV316A3	prototype	chr2	117633211	117641397	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009312.1	ENSG00000238207	112742	AC064856.1	ENSG00000286370	93747	None	None
MER101_2q14.1c	HERV	MER101	internal	chr2	118024789	118026310	-	noncoding	AC009303.2	lncRNA	ANTISENSE	ENSG00000235066	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q14.2a	HERV	ERVLB4	internal	chr2	118523082	118526546	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	THORLNC	ENSG00000226856	300832	LINC01956	ENSG00000258910	240419	None	None
HERVIP10FH_2q14.2	HERV	HERVIP10FH	oneside	chr2	118949646	118953399	-	coding	MARCO,AC013457.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000019169,ENSG00000259094	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:118952981-118952985
HERVK11_2q14.2	HERV	HERVK11	prototype	chr2	119373755	119376815	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM37	ENSG00000171227	53086	DBI	ENSG00000155368	1195	None	None
PABLA_2q14.2	HERV	PABLA	internal	chr2	119379009	119382220	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM37	ENSG00000171227	47681	DBI	ENSG00000155368	6449	None	None
MER4_2q14.2	HERV	MER4	oneside	chr2	119379796	119382533	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM37	ENSG00000171227	47368	DBI	ENSG00000155368	7236	None	None
HUERSP3_2q14.2	HERV	HUERSP3	prototype	chr2	119853828	119857650	-	noncoding	PTPN4	protein_coding	ANTISENSE	ENSG00000088179	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_2q14.2	HERV	HUERSP1	oneside	chr2	120029543	120030555	+	noncoding	EPB41L5	protein_coding	SENSE	ENSG00000115109	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q14.2b	HERV	ERVLB4	internal	chr2	120619874	120622034	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018866.1	ENSG00000201006	29239	AC073257.1	ENSG00000232140	61755	None	None
ERVLE_2q14.2	HERV	ERVLE	internal	chr2	121319387	121323125	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC013399.1	ENSG00000232723	8975	CLASP1	ENSG00000074054	14651	None	None
LTR23_2q14.3	HERV	LTR23	internal	chr2	121679495	121680336	-	noncoding	NIFK-AS1	lncRNA	ANTISENSE	ENSG00000236859	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_2q14.3a	HERV	HERVIP10FH	internal	chr2	121680605	121682019	-	noncoding	NIFK-AS1	lncRNA	ANTISENSE	ENSG00000236859	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_2q14.3b	HERV	HERVIP10FH	oneside	chr2	121682072	121683452	-	noncoding	NIFK-AS1	lncRNA	ANTISENSE	ENSG00000236859	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:121682617-121682626
HERV3_2q14.3	HERV	HERV3	internal	chr2	121684030	121686558	-	noncoding	NIFK-AS1	lncRNA	ANTISENSE	ENSG00000236859	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q14.3a	HERV	ERVLE	internal	chr2	121912683	121913849	+	noncoding	AC011246.1	lncRNA	SENSE	ENSG00000286481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q14.3a	HERV	ERVLB4	internal	chr2	121914480	121915167	-	noncoding	AC011246.1	lncRNA	ANTISENSE	ENSG00000286481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q14.3b	HERV	ERVLE	internal	chr2	122170256	122172600	+	noncoding	AC011246.1	lncRNA	SENSE	ENSG00000286481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q14.3c	HERV	ERVLE	internal	chr2	122200220	122201707	-	noncoding	AC011246.1	lncRNA	ANTISENSE	ENSG00000286481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q14.3a	HERV	ERV316A3	internal	chr2	122705347	122708324	-	noncoding	AC011246.1	lncRNA	ANTISENSE	ENSG00000286481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:122707167-122707535	None
ERVLB4_2q14.3b	HERV	ERVLB4	internal	chr2	122826918	122830736	+	noncoding	AC011246.1	lncRNA	SENSE	ENSG00000286481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_2q14.3a	HERV	MER41	internal	chr2	122838227	122838753	+	noncoding	AC011246.1	lncRNA	SENSE	ENSG00000286481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q14.3b	HERV	ERV316A3	internal	chr2	122896115	122896824	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011246.1	ENSG00000286481	8424	AC062020.1	ENSG00000237856	168497	None	None
HUERSP2_2q14.3	HERV	HUERSP2	prototype	chr2	122923174	122926160	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC062020.1	ENSG00000237856	139161	AC011246.1	ENSG00000286481	35483	None	None
ERVLE_2q14.3d	HERV	ERVLE	internal	chr2	123096554	123097887	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01826	ENSG00000232740	23073	AC073409.2	ENSG00000287854	323599	None	None
ERVLE_2q14.3e	HERV	ERVLE	internal	chr2	123165798	123166737	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01826	ENSG00000232740	92317	AC073409.2	ENSG00000287854	254749	None	None
ERVLE_2q14.3f	HERV	ERVLE	internal	chr2	123275054	123276013	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01826	ENSG00000232740	201573	AC073409.2	ENSG00000287854	145473	None	None
MER4B_2q14.3	HERV	MER4B	internal	chr2	123467446	123468835	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073409.1	ENSG00000226708	23001	AC092646.2	ENSG00000235640	226467	None	None
MER4_2q14.3	HERV	MER4	oneside	chr2	123468851	123474079	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073409.1	ENSG00000226708	24406	AC092646.2	ENSG00000235640	221223	None	None
ERVLB4_2q14.3c	HERV	ERVLB4	oneside	chr2	123492359	123493911	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092646.2	ENSG00000235640	201391	AC073409.1	ENSG00000226708	47914	None	None
ERVLB4_2q14.3d	HERV	ERVLB4	internal	chr2	123493934	123496304	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073409.1	ENSG00000226708	49489	AC092646.2	ENSG00000235640	198998	None	None
HERVL_2q14.3a	HERV	HERVL	prototype	chr2	123496310	123500363	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092646.2	ENSG00000235640	194939	AC073409.1	ENSG00000226708	51865	None	None
ERVLB4_2q14.3e	HERV	ERVLB4	internal	chr2	123500365	123501363	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073409.1	ENSG00000226708	55920	AC092646.2	ENSG00000235640	193939	None	None
HERVH_2q14.3	HERV	HERVH	oneside	chr2	123659079	123661097	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092646.2	ENSG00000235640	34205	AC073409.1	ENSG00000226708	214634	None	None
HERVS71_2q14.3a	HERV	HERVS71	oneside	chr2	123681643	123683589	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073409.1	ENSG00000226708	237198	AC092646.2	ENSG00000235640	11713	None	None
HERVS71_2q14.3b	HERV	HERVS71	oneside	chr2	123686372	123691521	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073409.1	ENSG00000226708	241927	AC092646.2	ENSG00000235640	3781	None	None
ERVLE_2q14.3g	HERV	ERVLE	internal	chr2	123772626	123774535	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092646.1	ENSG00000227738	9555	AC064859.1	ENSG00000279874	75987	None	None
MER101_2q14.3	HERV	MER101	internal	chr2	124829718	124832460	-	noncoding	CNTNAP5	protein_coding	ANTISENSE	ENSG00000155052	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_2q14.3	HERV	LTR57	internal	chr2	124831685	124832890	-	noncoding	CNTNAP5	protein_coding	ANTISENSE	ENSG00000155052	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_2q14.3b	HERV	MER41	unknown	chr2	124983847	124994596	+	coding	RNU6-259P	snRNA	SENSE	ENSG00000206726	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q14.3f	HERV	ERVLB4	internal	chr2	125010718	125012997	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-259P	ENSG00000206726	21393	AC097499.2	ENSG00000286206	652334	None	None
MER61_2q14.3	HERV	MER61	prototype	chr2	125185661	125188060	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097499.2	ENSG00000286206	477271	RNU6-259P	ENSG00000206726	196336	None	None
HERVP71A_2q14.3	HERV	HERVP71A	oneside	chr2	125257165	125262376	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097499.2	ENSG00000286206	402955	RNU6-259P	ENSG00000206726	267840	None	None
ERV316A3_2q14.3c	HERV	ERV316A3	internal	chr2	125419891	125421132	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-259P	ENSG00000206726	430566	AC097499.2	ENSG00000286206	244199	None	None
ERVLB4_2q14.3g	HERV	ERVLB4	internal	chr2	125466763	125467894	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097499.2	ENSG00000286206	197437	RNU6-259P	ENSG00000206726	477438	None	None
HERVL_2q14.3b	HERV	HERVL	oneside	chr2	125658411	125661002	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-259P	ENSG00000206726	669086	AC097499.2	ENSG00000286206	4329	None	None
HERVL_2q14.3c	HERV	HERVL	prototype	chr2	125884984	125891050	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01941	ENSG00000226813	218711	AC097499.1	ENSG00000224410	61669	None	None
ERVLE_2q14.3h	HERV	ERVLE	internal	chr2	126051100	126053009	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097499.1	ENSG00000224410	227785	LINC01941	ENSG00000226813	56752	None	None
HERVL_2q14.3d	HERV	HERVL	prototype	chr2	126070820	126080209	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097499.1	ENSG00000224410	247505	LINC01941	ENSG00000226813	29552	None	None
HERVL_2q14.3e	HERV	HERVL	prototype	chr2	126095650	126098350	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097499.1	ENSG00000224410	272335	LINC01941	ENSG00000226813	11411	None	None
HERVL18_2q14.3a	HERV	HERVL18	oneside	chr2	126371248	126373480	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	YWHAZP2	ENSG00000213236	183955	AC023347.1	ENSG00000235774	27256	None	None
ERVLB4_2q14.3h	HERV	ERVLB4	oneside	chr2	126522088	126528169	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	YWHAZP2	ENSG00000213236	29266	AC023347.1	ENSG00000235774	178096	None	None
HERVL_2q14.3f	HERV	HERVL	prototype	chr2	126645902	126652426	-	noncoding	AC013474.2	lncRNA	SENSE	ENSG00000288524	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:126646167-126646169
ERVLB4_2q14.3i	HERV	ERVLB4	internal	chr2	126759393	126761238	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-675P	ENSG00000206963	56451	TEX51	ENSG00000237524	137626	None	None
HML5_2q14.3	HERV	HML5	oneside	chr2	127369875	127375395	+	noncoding	AC068282.1,MAP3K2	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000286145,ENSG00000169967	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML6_2q14.3	HERV	HML6	prototype	chr2	127615267	127618672	-	noncoding	MYO7B	protein_coding	ANTISENSE	ENSG00000169994	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:127618363-127618672	chr2:127617868-127617871
HUERSP3_2q14.3	HERV	HUERSP3	prototype	chr2	127818051	127825835	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	WDR33	ENSG00000136709	6864	AC006011.1	ENSG00000200390	3912	None	None
HERVL18_2q14.3b	HERV	HERVL18	oneside	chr2	127830883	127833378	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006011.1	ENSG00000200390	1031	AC006011.3	ENSG00000274010	7228	chr2:127830884-127831099	None
HERVI_2q14.3	HERV	HERVI	oneside	chr2	128036818	128040545	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SAP130	ENSG00000136715	8698	AC108059.4	ENSG00000234044	26649	None	chr2:128037132-128037142
HERVIP10F_2q14.3	HERV	HERVIP10F	oneside	chr2	128040542	128043325	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SAP130	ENSG00000136715	12422	AC108059.4	ENSG00000234044	23869	None	chr2:128043206-128043222
ERVLE_2q14.3i	HERV	ERVLE	internal	chr2	128067912	128073631	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108059.1	ENSG00000200432	11	UGGT1	ENSG00000136731	17569	None	None
ERV316A3_2q14.3d	HERV	ERV316A3	prototype	chr2	128079979	128081205	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108059.1	ENSG00000200432	12078	UGGT1	ENSG00000136731	9995	None	None
ERVLB4_2q21.1a	HERV	ERVLB4	oneside	chr2	129398200	129404464	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01854	ENSG00000204460	124352	PPIAP65	ENSG00000233428	91833	None	None
ERVLB4_2q21.1b	HERV	ERVLB4	internal	chr2	129507634	129511188	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP65	ENSG00000233428	10846	LINC02572	ENSG00000229536	313938	None	None
HML2_2q21.1	HERV	HML2	oneside	chr2	129961965	129965044	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAB6C-AS1	ENSG00000225449	1548	LINC01856	ENSG00000237574	15262	None	None
MER101_2q21.1a	HERV	MER101	internal	chr2	130022468	130023342	+	noncoding	AC079776.4,FAR2P1	lncRNA,transcribed_unprocessed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000286026,ENSG00000180178	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_2q21.1a	HERV	MER4	internal	chr2	130070150	130070791	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POTEF	ENSG00000196604	2744	AC018865.3	ENSG00000286058	19019	None	None
MER101_2q21.1b	HERV	MER101	internal	chr2	130413190	130414090	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTPN18	ENSG00000072135	37785	FAR2P2	ENSG00000178162	2665	None	None
MER4_2q21.1b	HERV	MER4	internal	chr2	130458722	130459363	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POTEI	ENSG00000196834	92	CYP4F62P	ENSG00000239402	17309	None	None
MER4_2q21.1c	HERV	MER4	internal	chr2	130661330	130661970	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POTEJ	ENSG00000222038	3239	CYP4F30P	ENSG00000214081	18080	None	None
MER101_2q21.1c	HERV	MER101	internal	chr2	130707408	130708291	-	noncoding	FAR2P3	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000240253	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q21.1c	HERV	ERVLB4	internal	chr2	130799480	130803676	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYCSP8	ENSG00000232503	22523	AC133785.1	ENSG00000233221	27302	None	None
ERVL_2q21.1	HERV	ERVL	internal	chr2	130839480	130840847	-	noncoding	ARHGEF4	protein_coding	ANTISENSE	ENSG00000136002	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_2q21.1a	HERV	MER41	internal	chr2	131213999	131214956	+	noncoding	PLEKHB2	protein_coding	SENSE	ENSG00000115762	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_2q21.1d	HERV	MER4	internal	chr2	131268134	131268775	+	noncoding	PLEKHB2	protein_coding	SENSE	ENSG00000115762	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_2q21.1d	HERV	MER101	internal	chr2	131314037	131314911	-	noncoding	PLEKHB2,AC073869.7	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000115762,ENSG00000284604	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_2q21.1e	HERV	MER101	internal	chr2	131403438	131404214	+	noncoding	LINC01120	lncRNA	SENSE	ENSG00000223631	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_2q21.1b	HERV	MER41	internal	chr2	131548084	131549045	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MED15P4	ENSG00000224679	11096	AC093838.1	ENSG00000286208	5962	None	None
MER4_2q21.1e	HERV	MER4	oneside	chr2	131558160	131564240	+	noncoding	AC093838.1	lncRNA	SENSE	ENSG00000286208	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q21.2a	HERV	ERV316A3	oneside	chr2	131738683	131739547	-	noncoding	C2orf27A,C2orf27A	lncRNA,transcribed_unprocessed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000287151,ENSG00000197927	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q21.2a	HERV	ERVLB4	prototype	chr2	131866427	131868682	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC103564.2	ENSG00000232760	29895	AJ239322.2	ENSG00000244337	89595	None	None
HERVIP10F_2q21.2	HERV	HERVIP10F	prototype	chr2	132139445	132148063	-	coding	ANKRD30BL	protein_coding	SENSE	ENSG00000163046	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q21.2b	HERV	ERV316A3	oneside	chr2	132192221	132194743	+	noncoding	ANKRD30BL	protein_coding	ANTISENSE	ENSG00000163046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q21.2a	HERV	ERVLE	internal	chr2	132471345	132475755	-	noncoding	GPR39	protein_coding	ANTISENSE	ENSG00000183840	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_2q21.2	HERV	HUERSP1	prototype	chr2	133871837	133878829	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092623.1	ENSG00000286697	149779	RN7SKP93	ENSG00000200708	275438	None	None
HARLEQUIN_2q21.2	HERV	HARLEQUIN	prototype	chr2	133893939	133898595	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP93	ENSG00000200708	297540	AC092623.1	ENSG00000286697	130013	None	None
ERVLB4_2q21.2b	HERV	ERVLB4	oneside	chr2	133962531	133967667	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP93	ENSG00000200708	366132	AC092623.1	ENSG00000286697	60941	None	None
ERV316A3_2q21.2c	HERV	ERV316A3	prototype	chr2	134034572	134037411	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MGAT5	ENSG00000152127	82572	AC092623.1	ENSG00000286697	1975	None	None
ERVLE_2q21.2b	HERV	ERVLE	internal	chr2	134114354	134116478	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MGAT5	ENSG00000152127	3505	AC092623.1	ENSG00000286697	81757	None	None
MER4B_2q21.2	HERV	MER4B	oneside	chr2	134221075	134224105	-	noncoding	MGAT5	protein_coding	ANTISENSE	ENSG00000152127	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q21.3	HERV	ERV316A3	oneside	chr2	135885578	135890637	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011999.1	ENSG00000214070	7318	MCM6	ENSG00000076003	9135	None	None
HML6_2q21.3	HERV	HML6	prototype	chr2	136071818	136077261	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC068492.1	ENSG00000237262	631	DARS-AS1	ENSG00000231890	49225	None	None
ERV316A3_2q22.1a	HERV	ERV316A3	prototype	chr2	136144277	136150317	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CXCR4	ENSG00000121966	26128	HNRNPKP2	ENSG00000227347	48797	chr2:136144078-136144353	None
HERVW_2q22.1	HERV	HERVW	oneside	chr2	136201887	136203359	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC112255.1	ENSG00000279024	27394	HNRNPKP2	ENSG00000227347	1384	None	None
HERVL18_2q22.1	HERV	HERVL18	prototype	chr2	137380712	137383860	+	noncoding	THSD7B	protein_coding	SENSE	ENSG00000144229	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2q22.1a	HERV	HERVL	oneside	chr2	137514142	137518957	+	noncoding	THSD7B	protein_coding	SENSE	ENSG00000144229	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2q22.1a	HERV	HERVH	oneside	chr2	137684383	137688660	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016679.1	ENSG00000222394	26672	THSD7B	ENSG00000144229	6665	None	None
ERVLE_2q22.1a	HERV	ERVLE	internal	chr2	137694385	137698075	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	THSD7B	ENSG00000144229	16667	AC016679.1	ENSG00000222394	17257	None	None
HERVL_2q22.1b	HERV	HERVL	oneside	chr2	137719909	137721744	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016679.1	ENSG00000222394	4469	HNMT	ENSG00000150540	242276	None	None
HERVL40_2q22.1	HERV	HERVL40	oneside	chr2	137748325	137751425	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016679.1	ENSG00000222394	32885	HNMT	ENSG00000150540	212595	None	None
MER41_2q22.1	HERV	MER41	oneside	chr2	138990050	138992107	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023468.1	ENSG00000287147	15044	AC013265.1	ENSG00000286778	331814	None	None
ERVLE_2q22.1b	HERV	ERVLE	internal	chr2	139021777	139024909	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023468.1	ENSG00000287147	46771	AC013265.1	ENSG00000286778	299012	None	None
HERVL_2q22.1c	HERV	HERVL	prototype	chr2	139208198	139215001	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023468.1	ENSG00000287147	233192	AC013265.1	ENSG00000286778	108920	None	None
ERVLE_2q22.1c	HERV	ERVLE	internal	chr2	139384359	139387090	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016710.2	ENSG00000229131	82685	AC062021.1	ENSG00000226939	5212	None	None
MER101_2q22.1	HERV	MER101	oneside	chr2	139432389	139434514	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016710.2	ENSG00000229131	35261	AC062021.1	ENSG00000226939	53242	None	None
LTR57_2q22.1	HERV	LTR57	internal	chr2	139670071	139671212	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012497.1	ENSG00000228374	61496	MRPS18BP2	ENSG00000235232	766	None	None
MER4_2q22.1a	HERV	MER4	oneside	chr2	139725709	139730770	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPS18BP2	ENSG00000235232	56404	AC012497.1	ENSG00000228374	1938	None	None
ERVLE_2q22.1d	HERV	ERVLE	internal	chr2	140212620	140214077	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO1P44	ENSG00000227149	2920	LINC01853	ENSG00000224028	80840	None	None
HERVH_2q22.1b	HERV	HERVH	prototype	chr2	140426394	140432402	+	noncoding	LRP1B	protein_coding	ANTISENSE	ENSG00000168702	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q22.1b	HERV	ERV316A3	prototype	chr2	140734634	140738788	+	noncoding	LRP1B	protein_coding	ANTISENSE	ENSG00000168702	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_2q22.1b	HERV	MER4	oneside	chr2	140871729	140877948	+	noncoding	LRP1B	protein_coding	ANTISENSE	ENSG00000168702	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_2q22.2	HERV	MER4	internal	chr2	141997126	141998303	+	noncoding	LRP1B	protein_coding	ANTISENSE	ENSG00000168702	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2q22.2	HERV	HERVH	prototype	chr2	142489679	142495325	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2V1P14	ENSG00000228134	48093	AC078882.1	ENSG00000244125	351849	None	None
ERV316A3_2q22.2a	HERV	ERV316A3	prototype	chr2	142578069	142581930	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2V1P14	ENSG00000228134	34094	AC013444.1	ENSG00000229781	272165	None	None
HERVW_2q22.2	HERV	HERVW	prototype	chr2	142899925	142907899	-	noncoding	KYNU	protein_coding	ANTISENSE	ENSG00000115919	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH48_2q22.2	HERV	HERVH48	prototype	chr2	142930835	142937291	-	noncoding	KYNU	protein_coding	ANTISENSE	ENSG00000115919	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:142931162-142931171,chr2:142931780-142931798,chr2:142932768-142932780,chr2:142933611-142933623,chr2:142933634-142933648,chr2:142935846-142935858,chr2:142935860-142935881
ERV316A3_2q22.2b	HERV	ERV316A3	oneside	chr2	143261716	143264508	-	noncoding	ARHGAP15	protein_coding	ANTISENSE	ENSG00000075884	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:143262119-143262566	chr2:143262559-143262566,chr2:143263942-143263947
ERV316A3_2q22.3a	HERV	ERV316A3	prototype	chr2	143751094	143753311	-	noncoding	ARHGAP15	protein_coding	ANTISENSE	ENSG00000075884	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_2q22.3	HERV	ERVL	internal	chr2	144551056	144552454	-	noncoding	LINC01412	lncRNA	ANTISENSE	ENSG00000232606	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q22.3a	HERV	ERVLE	internal	chr2	144738598	144739285	+	noncoding	TEX41	lncRNA	SENSE	ENSG00000226674	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q22.3b	HERV	ERVLE	internal	chr2	145070326	145071899	-	noncoding	TEX41	lncRNA	ANTISENSE	ENSG00000226674	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_2q22.3a	HERV	HERVL	prototype	chr2	145093040	145094341	-	noncoding	TEX41	lncRNA	ANTISENSE	ENSG00000226674	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q22.3b	HERV	ERV316A3	oneside	chr2	145456100	145458831	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092484.1	ENSG00000225107	110463	RPL6P5	ENSG00000214064	118043	None	None
ERV316A3_2q22.3c	HERV	ERV316A3	oneside	chr2	145568458	145569941	-	noncoding	AC092484.1	lncRNA	SENSE	ENSG00000225107	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q22.3d	HERV	ERV316A3	internal	chr2	145884454	145888622	-	noncoding	AC079248.1	lncRNA	ANTISENSE	ENSG00000233842	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q22.3a	HERV	ERVLB4	oneside	chr2	146098178	146105018	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079248.1	ENSG00000233842	167032	RNU7-2P	ENSG00000251905	40138	None	None
ERV316A3_2q22.3e	HERV	ERV316A3	oneside	chr2	146288239	146290955	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093084.1	ENSG00000227134	186472	RPL17P12	ENSG00000230559	93418	None	None
ERVLE_2q22.3c	HERV	ERVLE	internal	chr2	146450237	146452643	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093084.1	ENSG00000227134	24784	RPL17P12	ENSG00000230559	255416	None	None
HERVL_2q22.3b	HERV	HERVL	prototype	chr2	146542872	146549807	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PABPC1P2	ENSG00000198526	37699	AC093084.1	ENSG00000227134	64759	None	None
MER34B_2q22.3	HERV	MER34B	oneside	chr2	146690813	146693930	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC103881.1	ENSG00000271583	139571	PABPC1P2	ENSG00000198526	101503	None	None
HERVL40_2q22.3a	HERV	HERVL40	internal	chr2	146698465	146699528	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PABPC1P2	ENSG00000198526	109155	AC103881.1	ENSG00000271583	133973	None	None
HERVL40_2q22.3b	HERV	HERVL40	oneside	chr2	146707425	146709473	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PABPC1P2	ENSG00000198526	118115	AC103881.1	ENSG00000271583	124028	None	None
HERVL_2q22.3c	HERV	HERVL	prototype	chr2	146774662	146781362	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PABPC1P2	ENSG00000198526	185352	AC103881.1	ENSG00000271583	52139	None	None
HERVW_2q22.3	HERV	HERVW	oneside	chr2	146998541	147001123	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC062032.1	ENSG00000227902	100323	AC018678.1	ENSG00000287847	149584	None	None
MER41_2q22.3	HERV	MER41	prototype	chr2	147216551	147221536	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-692P	ENSG00000207225	186806	AC018678.1	ENSG00000287847	64504	None	None
ERVLB4_2q22.3b	HERV	ERVLB4	internal	chr2	147277063	147277739	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-692P	ENSG00000207225	130603	AC018678.1	ENSG00000287847	125016	None	None
HERV9_2q22.3	HERV	HERV9	prototype	chr2	147311309	147319336	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018678.1	ENSG00000287847	159262	RNU6-692P	ENSG00000207225	89006	None	None
HERVL18_2q23.1	HERV	HERVL18	prototype	chr2	148253645	148259882	-	noncoding	MBD5	protein_coding	ANTISENSE	ENSG00000204406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:148259660-148259992	chr2:148259660-148259666
HML1_2q23.2	HERV	HML1	oneside	chr2	149321871	149324851	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM8A3P	ENSG00000224337	435	LYPD6	ENSG00000187123	5134	None	None
ERV316A3_2q23.2	HERV	ERV316A3	oneside	chr2	149415508	149417296	-	noncoding	LYPD6	protein_coding	ANTISENSE	ENSG00000187123	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2q23.3a	HERV	HERVH	prototype	chr2	150112717	150118564	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MMADHC-DT	ENSG00000231969	65270	AC016682.1	ENSG00000286081	32069	None	chr2:150113137-150113149,chr2:150113190-150113199,chr2:150113228-150113242
ERV316A3_2q23.3a	HERV	ERV316A3	internal	chr2	150237847	150242265	-	noncoding	LINC01818,LINC01817	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000230645,ENSG00000231420	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q23.3b	HERV	ERV316A3	oneside	chr2	150343432	150345370	-	noncoding	LINC01818	lncRNA	ANTISENSE	ENSG00000230645	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2q23.3	HERV	HERVL	prototype	chr2	150829936	150836450	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023469.2	ENSG00000228064	146056	LINC02612	ENSG00000224048	194118	None	None
HERVH_2q23.3d	HERV	HERVH	tandem*	chr2	150953417	150962930	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02612	ENSG00000224048	317599	AC023469.2	ENSG00000228064	19576	None	None
LTR57_2q23.3	HERV	LTR57	internal	chr2	151247249	151248740	-	noncoding	RBM43	protein_coding	SENSE	ENSG00000184898	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVH_2q23.3b	HERV	HERVH	prototype	chr2	151309068	151315223	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NMI	ENSG00000123609	19174	TNFAIP6	ENSG00000123610	42369	None	chr2:151315117-151315121,chr2:151314297-151314301
HML3_2q23.3a	HERV	HML3	oneside	chr2	152178170	152181446	-	noncoding	AC079790.2	lncRNA	ANTISENSE	ENSG00000286234	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_2q23.3b	HERV	HML3	oneside	chr2	152273628	152278421	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC079347.1	ENSG00000199884	5929	AC079790.2	ENSG00000286234	48417	None	None
HML3_2q23.3c	HERV	HML3	oneside	chr2	152278491	152279762	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079347.1	ENSG00000199884	4588	AC079790.2	ENSG00000286234	53280	None	None
HERVIP10F_2q23.3	HERV	HERVIP10F	prototype	chr2	152701339	152709137	+	noncoding	PRPF40A	protein_coding	ANTISENSE	ENSG00000196504	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q23.3a	HERV	ERVLE	internal	chr2	152764693	152766715	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009969.1	ENSG00000234932	83938	ARL6IP6	ENSG00000177917	3440	None	None
ERVLB4_2q23.3	HERV	ERVLB4	internal	chr2	152780807	152781886	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC009969.1	ENSG00000234932	68767	ARL6IP6	ENSG00000177917	19554	None	None
HERV4_2q23.3	HERV	HERV4	oneside	chr2	152962529	152970633	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATP5PBP4	ENSG00000214025	188305	UBQLN4P2	ENSG00000226213	84762	None	None
HUERSP1_2q23.3	HERV	HUERSP1	oneside	chr2	153240272	153244351	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079150.1	ENSG00000226338	32109	LINC01850	ENSG00000227708	93354	None	None
MER41_2q23.3	HERV	MER41	internal	chr2	153257554	153258263	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079150.1	ENSG00000226338	49391	LINC01850	ENSG00000227708	79442	None	None
MER61_2q23.3	HERV	MER61	internal	chr2	153500669	153501301	-	noncoding	AC012501.2	lncRNA	SENSE	ENSG00000227400	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2q23.3c	HERV	HERVH	oneside	chr2	153534536	153536035	-	noncoding	AC012501.2	lncRNA	SENSE	ENSG00000227400	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q23.3b	HERV	ERVLE	internal	chr2	153690517	153693315	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012501.2	ENSG00000227400	97229	DNAJA1P2	ENSG00000236917	68135	None	None
HERVL40_2q23.3	HERV	HERVL40	oneside	chr2	153934404	153936604	-	noncoding	GALNT13	protein_coding	ANTISENSE	ENSG00000144278	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2q24.1	HERV	HERVL	prototype	chr2	154110239	154117302	-	noncoding	GALNT13	protein_coding	ANTISENSE	ENSG00000144278	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q24.1a	HERV	ERVLE	oneside	chr2	154469035	154471004	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009227.2	ENSG00000238004	8215	RNA5SP107	ENSG00000223290	119403	None	None
MER101_2q24.1	HERV	MER101	internal	chr2	154528502	154529699	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009227.2	ENSG00000238004	67682	RNA5SP107	ENSG00000223290	60708	None	None
HERVS71_2q24.1	HERV	HERVS71	oneside	chr2	154576160	154578301	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP107	ENSG00000223290	12106	AC009227.2	ENSG00000238004	115340	None	None
HERVH_2q24.1a	HERV	HERVH	oneside	chr2	154582639	154587189	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP107	ENSG00000223290	3218	AC009227.2	ENSG00000238004	121819	None	None
HERVL40_2q24.1	HERV	HERVL40	oneside	chr2	154806119	154809098	-	noncoding	KCNJ3	protein_coding	ANTISENSE	ENSG00000162989	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2q24.1b	HERV	HERVH	prototype	chr2	154867229	154874560	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCNJ3	ENSG00000162989	8875	CBX3P6	ENSG00000228837	65981	None	None
ERV316A3_2q24.1a	HERV	ERV316A3	internal	chr2	155009030	155011170	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1001P	ENSG00000223197	78269	AC092625.1	ENSG00000230991	39929	None	None
ERVLB4_2q24.1a	HERV	ERVLB4	unknown	chr2	155060998	155063399	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1001P	ENSG00000223197	26040	AC092625.1	ENSG00000230991	91897	None	None
ERVLB4_2q24.1b	HERV	ERVLB4	internal	chr2	155069277	155073326	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1001P	ENSG00000223197	16113	AC092625.1	ENSG00000230991	100176	None	None
ERV316A3_2q24.1b	HERV	ERV316A3	internal	chr2	155299164	155301479	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTND4P28	ENSG00000233709	9544	ATP5F1AP2	ENSG00000227682	29030	None	None
ERV316A3_2q24.1c	HERV	ERV316A3	oneside	chr2	155334536	155336116	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-546P	ENSG00000206718	4009	AC073225.1	ENSG00000286679	189308	None	None
ERV316A3_2q24.1d	HERV	ERV316A3	oneside	chr2	155336148	155341190	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-546P	ENSG00000206718	5621	AC073225.1	ENSG00000286679	184234	None	None
ERVLE_2q24.1b	HERV	ERVLE	internal	chr2	155390022	155391669	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073225.1	ENSG00000286679	133755	RNU6-546P	ENSG00000206718	59495	None	None
ERV316A3_2q24.1e	HERV	ERV316A3	internal	chr2	155588151	155589074	-	noncoding	AC073225.1	lncRNA	ANTISENSE	ENSG00000286679	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVL_2q24.1a	HERV	ERVL	internal	chr2	155923046	155927646	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01876	ENSG00000226383	83884	AC073225.1	ENSG00000286679	258378	None	None
HERVH_2q24.1c	HERV	HERVH	prototype	chr2	156720084	156725844	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPLP0P7	ENSG00000238069	51862	LINC01958	ENSG00000283436	24425	None	None
ERVL_2q24.1b	HERV	ERVL	oneside	chr2	156732143	156733858	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01958	ENSG00000283436	36484	RPLP0P7	ENSG00000238069	43848	None	None
HERVH_2q24.1d	HERV	HERVH	prototype	chr2	157340836	157343474	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM133DP	ENSG00000230562	36250	ERMN	ENSG00000136541	13123	None	None
HERVH_2q24.1e	HERV	HERVH	oneside	chr2	157343501	157345447	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ERMN	ENSG00000136541	15788	FAM133DP	ENSG00000230562	34277	None	None
ERV316A3_2q24.1f	HERV	ERV316A3	internal	chr2	157940776	157946319	+	noncoding	UPP2	protein_coding	SENSE	ENSG00000007001	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q24.1c	HERV	ERVLE	internal	chr2	157997798	157998459	+	noncoding	UPP2	protein_coding	SENSE	ENSG00000007001	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q24.1d	HERV	ERVLE	internal	chr2	158205645	158207924	+	noncoding	CCDC148-AS1,CCDC148	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000227480,ENSG00000153237	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVE_2q24.1a	HERV	HERVE	internal	chr2	158846950	158849244	+	noncoding	DAPL1,AC064843.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000163331,ENSG00000286621	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVE_2q24.1b	HERV	HERVE	internal	chr2	158866185	158870242	+	noncoding	AC064843.1	lncRNA	ANTISENSE	ENSG00000286621	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVE_2q24.1c	HERV	HERVE	oneside	chr2	158881457	158886251	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR7E90P	ENSG00000188668	5787	RNU2-21P	ENSG00000222300	49547	None	None
MER4_2q24.2a	HERV	MER4	oneside	chr2	160065731	160069590	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ITGB6	ENSG00000115221	30077	PLA2R1	ENSG00000153246	3116	None	None
MER4_2q24.2b	HERV	MER4	oneside	chr2	160069827	160072587	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ITGB6	ENSG00000115221	27080	PLA2R1	ENSG00000153246	7212	None	None
HUERSP3_2q24.2	HERV	HUERSP3	prototype	chr2	160080864	160090141	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ITGB6	ENSG00000115221	9526	PLA2R1	ENSG00000153246	18249	None	None
ERV316A3_2q24.2a	HERV	ERV316A3	internal	chr2	160538512	160539128	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096656.1	ENSG00000279844	310185	RBMS1	ENSG00000153250	44705	None	None
ERVLE_2q24.2a	HERV	ERVLE	internal	chr2	160554652	160557062	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096656.1	ENSG00000279844	292251	RBMS1	ENSG00000153250	60845	None	None
ERV316A3_2q24.2b	HERV	ERV316A3	prototype	chr2	160782580	160787301	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBMS1	ENSG00000153250	288773	AC096656.1	ENSG00000279844	62012	None	None
ERVLE_2q24.2b	HERV	ERVLE	internal	chr2	160944810	160949283	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL423P	ENSG00000244372	66960	AC009313.2	ENSG00000232337	99323	None	None
ERV316A3_2q24.2c	HERV	ERV316A3	oneside	chr2	161486903	161489610	-	noncoding	SLC4A10	protein_coding	ANTISENSE	ENSG00000144290	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q24.2	HERV	ERVLB4	internal	chr2	161768160	161769489	-	noncoding	SLC4A10	protein_coding	ANTISENSE	ENSG00000144290	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_2q24.2	HERV	HERVL40	oneside	chr2	161831880	161836115	+	noncoding	SLC4A10	protein_coding	SENSE	ENSG00000144290	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q24.2c	HERV	ERVLE	internal	chr2	162075545	162076401	-	noncoding	DPP4-DT	lncRNA	ANTISENSE	ENSG00000230918	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr2:162075303-162075566	None
ERVLE_2q24.2d	HERV	ERVLE	internal	chr2	162080254	162081418	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EIF3EP2	ENSG00000224674	6841	DPP4-DT	ENSG00000230918	2343	None	None
HUERSP2_2q24.2	HERV	HUERSP2	prototype	chr2	162324003	162329299	-	noncoding	GCA	protein_coding	ANTISENSE	ENSG00000115271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:162329084-162329086
LTR25_2q24.2	HERV	LTR25	internal	chr2	162490534	162496239	+	noncoding	KCNH7	protein_coding	ANTISENSE	ENSG00000184611	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q24.3a	HERV	ERV316A3	prototype	chr2	162911942	162918630	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCNH7	ENSG00000184611	73175	RPL7P61	ENSG00000230282	233621	None	None
ERV316A3_2q24.3b	HERV	ERV316A3	oneside	chr2	162981788	162983298	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCNH7	ENSG00000184611	143021	RPL7P61	ENSG00000230282	168953	None	None
MER61_2q24.3	HERV	MER61	prototype	chr2	163143522	163148982	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCNH7	ENSG00000184611	304755	RPL7P61	ENSG00000230282	3269	None	None
ERV316A3_2q24.3c	HERV	ERV316A3	oneside	chr2	163229286	163231364	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-627P	ENSG00000200902	57631	RPL7P61	ENSG00000230282	75979	None	None
ERVLE_2q24.3a	HERV	ERVLE	internal	chr2	163581868	163584936	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-627P	ENSG00000200902	292772	FIGN	ENSG00000182263	8460	None	None
HERVL_2q24.3a	HERV	HERVL	prototype	chr2	164171803	164177223	-	noncoding	AC016766.1	lncRNA	SENSE	ENSG00000237844	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2q24.3a	HERV	HERVH	prototype	chr2	164295826	164301566	+	noncoding	AC016766.1	lncRNA	ANTISENSE	ENSG00000237844	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2q24.3b	HERV	HERVH	oneside	chr2	164459160	164463273	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016766.1	ENSG00000237844	106937	GRB14	ENSG00000115290	29144	None	None
HERVW_2q24.3	HERV	HERVW	oneside	chr2	164657911	164659611	-	noncoding	COBLL1	protein_coding	SENSE	ENSG00000082438	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2q24.3b	HERV	HERVL	oneside	chr2	164866069	164867487	+	noncoding	AC019197.1	lncRNA	SENSE	ENSG00000236283	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_2q24.3	HERV	MER4B	internal	chr2	165434158	165437437	-	noncoding	AC011303.1	lncRNA	SENSE	ENSG00000288089	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q24.3d	HERV	ERV316A3	prototype	chr2	165691621	165696599	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GALNT3	ENSG00000115339	50989	CSRNP3	ENSG00000178662	2214	None	None
HERVH_2q24.3c	HERV	HERVH	prototype	chr2	165707552	165716198	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GALNT3	ENSG00000115339	31390	CSRNP3	ENSG00000178662	18145	None	None
ERVLE_2q24.3b	HERV	ERVLE	internal	chr2	165779881	165783164	-	noncoding	GALNT3	protein_coding	SENSE	ENSG00000115339	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q24.3c	HERV	ERVLE	internal	chr2	166559736	166561139	-	noncoding	SCN7A	protein_coding	SENSE	ENSG00000136546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q24.3a	HERV	ERVLB4	prototype	chr2	166601946	166604205	-	noncoding	SCN7A	protein_coding	SENSE	ENSG00000136546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_2q24.3	HERV	HML5	oneside	chr2	166609117	166613448	+	noncoding	SCN7A	protein_coding	ANTISENSE	ENSG00000136546	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:166611478-166611483
HERVKC4_2q24.3	HERV	HERVKC4	internal	chr2	166613512	166614455	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SCN7A	ENSG00000136546	2030	XIRP2	ENSG00000163092	274032	None	None
ERVLE_2q24.3d	HERV	ERVLE	internal	chr2	166761575	166762276	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	XIRP2	ENSG00000163092	126211	SCN7A	ENSG00000136546	150093	None	None
ERV316A3_2q24.3e	HERV	ERV316A3	prototype	chr2	167016606	167018662	-	noncoding	XIRP2	protein_coding	ANTISENSE	ENSG00000163092	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q24.3b	HERV	ERVLB4	oneside	chr2	167303747	167305167	-	noncoding	AC073050.1	lncRNA	ANTISENSE	ENSG00000228222	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q24.3c	HERV	ERVLB4	internal	chr2	168257550	168263450	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	STK39	ENSG00000198648	9955	RN7SL813P	ENSG00000241074	187874	None	None
PRIMA4_2q24.3	HERV	PRIMA4	internal	chr2	168501085	168504784	-	noncoding	CERS6	protein_coding	ANTISENSE	ENSG00000172292	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2q31.1a	HERV	HERVH	oneside	chr2	169133783	169136806	+	noncoding	LRP2	protein_coding	ANTISENSE	ENSG00000081479	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_2q31.1	HERV	HERVL18	prototype	chr2	169711625	169717593	-	coding	KLHL23	protein_coding	ANTISENSE	ENSG00000213160	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:169716636-169717010	chr2:169717386-169717390
HML5_2q31.1a	HERV	HML5	prototype	chr2	170112017	170119784	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBR3	ENSG00000144357	27886	RNU6-1006P	ENSG00000252807	212	None	None
MER61_2q31.1a	HERV	MER61	oneside	chr2	170207243	170212933	-	noncoding	MYO3B	protein_coding	ANTISENSE	ENSG00000071909	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:170212553-170213095	None
HUERSP1_2q31.1a	HERV	HUERSP1	prototype	chr2	170447631	170455398	-	noncoding	MYO3B	protein_coding	ANTISENSE	ENSG00000071909	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11D_2q31.1	HERV	HERVK11D	prototype	chr2	170615660	170619450	-	noncoding	MYO3B	protein_coding	ANTISENSE	ENSG00000071909	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2q31.1b	HERV	HERVH	prototype	chr2	170977458	170983386	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TLK1	ENSG00000198586	7437	GORASP2	ENSG00000115806	10328	None	None
HERVW_2q31.1a	HERV	HERVW	oneside	chr2	171560037	171562107	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL21P38	ENSG00000233934	24986	CYBRD1	ENSG00000071967	1908	None	None
HERV4_2q31.1	HERV	HERV4	oneside	chr2	171827382	171833335	+	noncoding	SLC25A12	protein_coding	ANTISENSE	ENSG00000115840	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_2q31.1b	HERV	HML5	prototype	chr2	172513063	172519738	+	noncoding	AC078883.1	lncRNA	ANTISENSE	ENSG00000225205	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLB_2q31.1	HERV	PABLB	internal	chr2	172520800	172524411	-	noncoding	AC078883.1	lncRNA	SENSE	ENSG00000225205	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_2q31.1b	HERV	HUERSP1	oneside	chr2	172530367	172531578	-	noncoding	AC078883.1	lncRNA	SENSE	ENSG00000225205	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_2q31.1a	HERV	MER41	internal	chr2	172536236	172536781	+	noncoding	AC078883.1	lncRNA	ANTISENSE	ENSG00000225205	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_2q31.1b	HERV	MER61	internal	chr2	172537081	172542095	+	coding	AC078883.1	lncRNA	ANTISENSE	ENSG00000225205	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2q31.1c	HERV	HERVH	oneside	chr2	172542098	172544286	+	noncoding	AC078883.1	lncRNA	ANTISENSE	ENSG00000225205	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_2q31.1c	HERV	MER61	internal	chr2	172544914	172547572	+	noncoding	AC078883.1	lncRNA	ANTISENSE	ENSG00000225205	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q31.1a	HERV	ERVLE	internal	chr2	172588620	172589203	-	noncoding	PDK1	protein_coding	ANTISENSE	ENSG00000152256	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q31.1a	HERV	ERV316A3	oneside	chr2	172687450	172688867	-	noncoding	RAPGEF4-AS1	lncRNA	SENSE	ENSG00000228016	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q31.1b	HERV	ERVLE	internal	chr2	173119652	173124224	-	noncoding	MAP3K20	protein_coding	ANTISENSE	ENSG00000091436	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_2q31.1	HERV	LTR25	internal	chr2	173291779	173300177	-	noncoding	AC092573.1	processed_pseudogene	ANTISENSE	ENSG00000231735	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_2q31.1b	HERV	MER41	prototype	chr2	173497760	173502877	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP66	ENSG00000226131	11398	AC013410.1	ENSG00000237016	72233	None	None
ERV316A3_2q31.1b	HERV	ERV316A3	oneside	chr2	173774650	173781020	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC106900.1	ENSG00000270460	30056	AC013410.2	ENSG00000237617	68502	None	None
MER4B_2q31.1	HERV	MER4B	oneside	chr2	174500051	174503705	-	noncoding	AC010894.1	processed_pseudogene	ANTISENSE	ENSG00000179997	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:174501931-174501938
ERVLB4_2q31.1	HERV	ERVLB4	oneside	chr2	174742999	174746543	+	noncoding	AC010894.3	lncRNA	SENSE	ENSG00000236449	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_2q31.1b	HERV	HERVW	oneside	chr2	175325143	175326529	+	noncoding	AC093459.1	lncRNA	SENSE	ENSG00000229066	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q31.2	HERV	ERVLE	internal	chr2	177336793	177339616	+	noncoding	NFE2L2,AC019080.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000116044,ENSG00000213963	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVW_2q31.2	HERV	HERVW	prototype	chr2	177409245	177413158	-	noncoding	AGPS	protein_coding	ANTISENSE	ENSG00000018510	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_2q31.2	HERV	HUERSP3B	internal	chr2	177834510	177837462	+	noncoding	PDE11A,PDE11A	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000128655,ENSG00000284741	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:177836577-177836584
ERV316A3_2q31.2	HERV	ERV316A3	oneside	chr2	178421097	178423900	-	noncoding	CHROMR	lncRNA	ANTISENSE	ENSG00000223960	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2q31.2	HERV	HERVH	prototype	chr2	179051587	179057323	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SESTD1	ENSG00000187231	44355	CCDC141	ENSG00000163492	1501	None	chr2:179057033-179057034
HERVL_2q31.2	HERV	HERVL	oneside	chr2	179073490	179074439	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC141	ENSG00000163492	23404	SESTD1	ENSG00000187231	27239	None	None
MER41_2q31.2	HERV	MER41	oneside	chr2	179469110	179471049	+	noncoding	ZNF385B	protein_coding	ANTISENSE	ENSG00000144331	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL32_2q31.3	HERV	HERVL32	prototype	chr2	179706005	179712066	+	noncoding	ZNF385B	protein_coding	ANTISENSE	ENSG00000144331	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q31.3a	HERV	ERV316A3	oneside	chr2	180009041	180011335	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012669.1	ENSG00000270289	461802	CWC22	ENSG00000163510	1744	None	None
ERV316A3_2q31.3b	HERV	ERV316A3	oneside	chr2	180011383	180014127	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012669.1	ENSG00000270289	459010	CWC22	ENSG00000163510	4086	None	None
HML1_2q31.3a	HERV	HML1	oneside	chr2	180056513	180057669	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CWC22	ENSG00000163510	49216	AC012669.1	ENSG00000270289	415468	None	None
HERVW_2q31.3a	HERV	HERVW	internal	chr2	180057712	180060299	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CWC22	ENSG00000163510	50415	AC012669.1	ENSG00000270289	412838	None	None
HML1_2q31.3b	HERV	HML1	oneside	chr2	180060300	180061494	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CWC22	ENSG00000163510	53003	AC012669.1	ENSG00000270289	411643	None	None
ERVLE_2q31.3a	HERV	ERVLE	internal	chr2	180223296	180228654	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC012669.1	ENSG00000270289	244483	CWC22	ENSG00000163510	215999	None	None
HERVW_2q31.3b	HERV	HERVW	prototype	chr2	180231677	180239319	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CWC22	ENSG00000163510	224380	AC012669.1	ENSG00000270289	233818	None	None
MER61_2q31.3	HERV	MER61	prototype	chr2	180336418	180341470	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CWC22	ENSG00000163510	329121	AC012669.1	ENSG00000270289	131667	None	chr2:180336935-180336938
ERV316A3_2q31.3c	HERV	ERV316A3	oneside	chr2	180349279	180351665	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CWC22	ENSG00000163510	341982	AC012669.1	ENSG00000270289	121472	None	None
ERV316A3_2q31.3d	HERV	ERV316A3	prototype	chr2	180442409	180447600	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012669.1	ENSG00000270289	25537	CWC22	ENSG00000163510	435112	None	None
ERVLE_2q31.3b	HERV	ERVLE	internal	chr2	181581043	181582395	-	noncoding	CERKL	protein_coding	SENSE	ENSG00000188452	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q31.3	HERV	ERVLB4	internal	chr2	181689377	181692173	+	noncoding	AC013733.1	lncRNA	ANTISENSE	ENSG00000225570	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q31.3e	HERV	ERV316A3	oneside	chr2	181728304	181730530	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6ATAC19P	ENSG00000221023	8076	SAP18P2	ENSG00000223873	33404	None	None
ERVLB4_2q32.1a	HERV	ERVLB4	prototype	chr2	182160251	182166729	+	noncoding	PDE1A	protein_coding	ANTISENSE	ENSG00000115252	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q32.1a	HERV	ERV316A3	prototype	chr2	182297786	182302304	+	noncoding	PDE1A	protein_coding	ANTISENSE	ENSG00000115252	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2q32.1a	HERV	HERVL	oneside	chr2	182389638	182396841	+	noncoding	PDE1A	protein_coding	ANTISENSE	ENSG00000115252	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2q32.1b	HERV	HERVL	oneside	chr2	182573805	182575634	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DNAJC10	ENSG00000077232	140407	PDE1A	ENSG00000115252	50613	None	None
ERVLE_2q32.1a	HERV	ERVLE	internal	chr2	182652741	182655617	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DNAJC10	ENSG00000077232	60424	PDE1A	ENSG00000115252	129549	None	None
ERVLE_2q32.1b	HERV	ERVLE	internal	chr2	182666678	182667641	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DNAJC10	ENSG00000077232	48400	PDE1A	ENSG00000115252	143486	None	None
HML5_2q32.1	HERV	HML5	internal	chr2	182764057	182766359	-	noncoding	DNAJC10	protein_coding	ANTISENSE	ENSG00000077232	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2q32.1a	HERV	HERVH	prototype	chr2	183044186	183049650	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NCKAP1	ENSG00000061676	5328	AC064871.2	ENSG00000221498	14585	None	None
HML3_2q32.1	HERV	HML3	prototype	chr2	183050272	183053767	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC064871.2	ENSG00000221498	10468	NCKAP1	ENSG00000061676	11414	None	None
ERVLE_2q32.1c	HERV	ERVLE	internal	chr2	183163953	183165191	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021851.1	ENSG00000272800	13615	NUP35	ENSG00000163002	2273	None	None
ERV316A3_2q32.1b	HERV	ERV316A3	internal	chr2	183724981	183728338	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093639.3	ENSG00000286879	169612	CACYBPP2	ENSG00000177855	116862	None	None
ERV316A3_2q32.1c	HERV	ERV316A3	oneside	chr2	184277439	184280012	-	noncoding	AC020584.1	lncRNA	ANTISENSE	ENSG00000286980	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q32.1d	HERV	ERV316A3	internal	chr2	184451658	184452712	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096667.1	ENSG00000283839	140865	AC020584.1	ENSG00000286980	68789	None	None
HERVL_2q32.1c	HERV	HERVL	prototype	chr2	184558907	184562855	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC020584.1	ENSG00000286980	176038	AC096667.1	ENSG00000283839	30722	chr2:184562660-184562819	None
ERVLB4_2q32.1b	HERV	ERVLB4	internal	chr2	184705883	184706560	-	noncoding	ZNF804A	protein_coding	ANTISENSE	ENSG00000170396	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q32.1c	HERV	ERVLB4	oneside	chr2	184916980	184920237	-	noncoding	ZNF804A	protein_coding	ANTISENSE	ENSG00000170396	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_2q32.1a	HERV	MER61	oneside	chr2	185012511	185015146	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF804A	ENSG00000170396	73019	AC009315.1	ENSG00000286797	409917	None	None
ERV316A3_2q32.1e	HERV	ERV316A3	oneside	chr2	185209066	185210600	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF804A	ENSG00000170396	269574	AC009315.1	ENSG00000286797	214463	None	None
MER34B_2q32.1	HERV	MER34B	internal	chr2	185255273	185256426	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF804A	ENSG00000170396	315781	AC009315.1	ENSG00000286797	168637	None	None
ERVLE_2q32.1d	HERV	ERVLE	internal	chr2	185313543	185314479	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF804A	ENSG00000170396	374051	AC009315.1	ENSG00000286797	110584	None	None
HERVL_2q32.1d	HERV	HERVL	prototype	chr2	185360423	185366274	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC009315.1	ENSG00000286797	58789	ZNF804A	ENSG00000170396	420931	None	None
MER61_2q32.1c	HERV	MER61	insert*	chr2	185628851	185630832	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FSIP2-AS1	ENSG00000231646	21542	AC080125.1	ENSG00000225406	81033	None	None
MER4_2q32.1	HERV	MER4	oneside	chr2	185676795	185680471	-	noncoding	FSIP2-AS1	lncRNA	SENSE	ENSG00000231646	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q32.1d	HERV	ERVLB4	unknown	chr2	185695746	185700208	+	noncoding	FSIP2-AS1	lncRNA	ANTISENSE	ENSG00000231646	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q32.1e	HERV	ERVLE	oneside	chr2	185942735	185943726	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FSIP2	ENSG00000188738	109445	AC097500.1	ENSG00000287129	6743	None	None
HUERSP3_2q32.1	HERV	HUERSP3	oneside	chr2	185963079	185965965	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01473	ENSG00000237877	66919	RPL21P32	ENSG00000224019	6016	None	None
ERVLE_2q32.1f	HERV	ERVLE	internal	chr2	185993085	185993833	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01473	ENSG00000237877	39051	RPL21P32	ENSG00000224019	36022	None	None
ERV316A3_2q32.1f	HERV	ERV316A3	oneside	chr2	185994150	185996442	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL21P32	ENSG00000224019	37087	LINC01473	ENSG00000237877	36442	None	None
ERVLB4_2q32.1e	HERV	ERVLB4	oneside	chr2	186263672	186265173	+	noncoding	LINC01473	lncRNA	ANTISENSE	ENSG00000237877	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2q32.1e	HERV	HERVL	prototype	chr2	186409559	186415438	-	noncoding	LINC01473	lncRNA	SENSE	ENSG00000237877	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_2q32.1	HERV	HERVL18	prototype	chr2	186431386	186438154	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01473	ENSG00000237877	8954	ZC3H15	ENSG00000065548	48099	None	None
ERV316A3_2q32.1g	HERV	ERV316A3	oneside	chr2	186820717	186824937	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM171B	ENSG00000144369	54758	ZSWIM2	ENSG00000163012	2538	chr2:186820814-186821121	None
ERVLE_2q32.1g	HERV	ERVLE	internal	chr2	186918744	186919651	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018735.1	ENSG00000226553	82225	ZSWIM2	ENSG00000163012	69536	None	None
ERV316A3_2q32.1h	HERV	ERV316A3	oneside	chr2	187085749	187087545	+	noncoding	AC007319.1	lncRNA	SENSE	ENSG00000224063	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2q32.1f	HERV	HERVL	prototype	chr2	187178291	187184613	-	coding	AC007319.1	lncRNA	ANTISENSE	ENSG00000224063	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2q32.1g	HERV	HERVL	prototype	chr2	187200359	187205857	-	noncoding	AC007319.1	lncRNA	ANTISENSE	ENSG00000224063	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2q32.1h	HERV	HERVL	internal	chr2	187225684	187227274	+	noncoding	AC007319.1	lncRNA	SENSE	ENSG00000224063	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2q32.1i	HERV	HERVL	oneside	chr2	187283756	187285839	-	noncoding	AC007319.1	lncRNA	ANTISENSE	ENSG00000224063	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q32.1h	HERV	ERVLE	internal	chr2	187290006	187292048	+	noncoding	AC007319.1	lncRNA	SENSE	ENSG00000224063	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q32.1f	HERV	ERVLB4	oneside	chr2	187324343	187325785	-	noncoding	AC007319.1	lncRNA	ANTISENSE	ENSG00000224063	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_2q32.1	HERV	HARLEQUIN	oneside	chr2	187510490	187515862	+	coding	AC007319.1,TFPI	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000224063,ENSG00000003436	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:187510841-187510846,chr2:187511103-187511110,chr2:187511118-187511133,chr2:187513647-187513660
HERVH_2q32.1b	HERV	HERVH	prototype	chr2	187557941	187566148	-	coding	TFPI	protein_coding	SENSE	ENSG00000003436	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:187565751-187565769,chr2:187565797-187565808
MER61_2q32.1b	HERV	MER61	prototype	chr2	187654611	187659513	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TFPI	ENSG00000003436	88851	LINC01090	ENSG00000231689	53303	None	chr2:187654746-187654772
HERVH_2q32.1c	HERV	HERVH	prototype	chr2	187670483	187676269	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01090	ENSG00000231689	36547	TFPI	ENSG00000003436	104723	None	None
ERV316A3_2q32.1i	HERV	ERV316A3	oneside	chr2	187791826	187792937	-	noncoding	LINC01090	lncRNA	SENSE	ENSG00000231689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_2q32.1	HERV	LTR57	internal	chr2	187917945	187919554	+	noncoding	LINC01090	lncRNA	ANTISENSE	ENSG00000231689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q32.1i	HERV	ERVLE	internal	chr2	187966433	187968535	+	noncoding	LINC01090	lncRNA	ANTISENSE	ENSG00000231689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2q32.1d	HERV	HERVH	prototype	chr2	188033498	188039136	+	noncoding	LINC01090	lncRNA	ANTISENSE	ENSG00000231689	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr2:188034834-188034995	chr2:188033998-188034020,chr2:188033809-188033810
HERVH_2q32.1e	HERV	HERVH	oneside	chr2	188164721	188166349	-	noncoding	LINC01090	lncRNA	SENSE	ENSG00000231689	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:188166032-188166055,chr2:188166124-188166135
HERVH_2q32.1f	HERV	HERVH	prototype	chr2	188168688	188174691	-	noncoding	LINC01090	lncRNA	SENSE	ENSG00000231689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:188174386-188174392
MER41_2q32.1	HERV	MER41	prototype	chr2	188234862	188240656	+	noncoding	LINC01090	lncRNA	ANTISENSE	ENSG00000231689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2q32.1j	HERV	HERVL	internal	chr2	188410656	188412104	-	noncoding	GULP1	protein_coding	ANTISENSE	ENSG00000144366	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q32.2a	HERV	ERVLE	internal	chr2	188771084	188772192	+	noncoding	AC092598.1,DIRC1	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000223523,ENSG00000174325	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2q32.2a	HERV	HERVL	prototype	chr2	188801605	188804800	+	noncoding	AC092598.1	lncRNA	ANTISENSE	ENSG00000223523	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q32.2b	HERV	ERVLE	internal	chr2	188808912	188810780	+	noncoding	AC092598.1	lncRNA	ANTISENSE	ENSG00000223523	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2q32.2b	HERV	HERVL	prototype	chr2	188904384	188910883	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	COL3A1	ENSG00000168542	63490	AC092598.1	ENSG00000223523	64939	None	None
ERV316A3_2q32.2a	HERV	ERV316A3	oneside	chr2	189075831	189078068	+	noncoding	COL5A2	protein_coding	ANTISENSE	ENSG00000204262	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q32.2	HERV	ERVLB4	internal	chr2	189418308	189418957	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	WDR75	ENSG00000115368	22489	KRT18P19	ENSG00000213601	106341	None	None
MER4_2q32.2	HERV	MER4	prototype	chr2	189880343	189882935	-	noncoding	C2orf88	protein_coding	ANTISENSE	ENSG00000187699	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q32.2c	HERV	ERVLE	internal	chr2	190086496	190087687	-	noncoding	C2orf88	protein_coding	ANTISENSE	ENSG00000187699	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_2q32.2	HERV	HERVP71A	prototype	chr2	190213418	190219869	+	noncoding	HIBCH	protein_coding	ANTISENSE	ENSG00000198130	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_2q32.2	HERV	HERVL40	prototype	chr2	190587122	190590915	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108047.1	ENSG00000233654	17346	AC006460.2	ENSG00000284052	16745	None	None
PABLA_2q32.2a	HERV	PABLA	oneside	chr2	190609031	190613075	-	noncoding	AC006460.2	lncRNA	SENSE	ENSG00000284052	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PABLA_2q32.2b	HERV	PABLA	internal	chr2	190613262	190614896	-	noncoding	AC006460.2	lncRNA	SENSE	ENSG00000284052	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q32.2b	HERV	ERV316A3	internal	chr2	190756516	190757108	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005540.1	ENSG00000235852	123689	AC006460.1	ENSG00000228509	47800	None	None
ERV316A3_2q32.2c	HERV	ERV316A3	oneside	chr2	190842238	190844528	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006460.1	ENSG00000228509	133522	AC005540.1	ENSG00000235852	36269	chr2:190842248-190842315,chr2:190843912-190844120	chr2:190844464-190844472,chr2:190844410-190844418
ERV316A3_2q32.3a	HERV	ERV316A3	internal	chr2	191179289	191181901	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092614.1	ENSG00000227542	47264	HMGB1P27	ENSG00000230611	4454	None	None
HUERSP1_2q32.3	HERV	HUERSP1	oneside	chr2	191584256	191588325	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MYO1B	ENSG00000128641	158867	NABP1	ENSG00000173559	89743	None	None
ERVLB4_2q32.3	HERV	ERVLB4	internal	chr2	192042435	192046614	+	noncoding	CAVIN2-AS1,TMEFF2	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000233766,ENSG00000144339	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_2q32.3a	HERV	HERVH	prototype	chr2	192130386	192136111	+	noncoding	TMEFF2	protein_coding	ANTISENSE	ENSG00000144339	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2q32.3	HERV	HERVL	oneside	chr2	192488401	192490663	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC062039.1	ENSG00000229395	139256	TMEFF2	ENSG00000144339	293468	None	None
HERVH_2q32.3b	HERV	HERVH	prototype	chr2	192506079	192513182	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEFF2	ENSG00000144339	311146	AC062039.1	ENSG00000229395	116737	None	None
ERVLE_2q32.3a	HERV	ERVLE	internal	chr2	192722238	192723160	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PCGEM1	ENSG00000227418	26685	AC062039.1	ENSG00000229395	76532	None	None
ERVLE_2q32.3b	HERV	ERVLE	internal	chr2	192755818	192757178	-	noncoding	PCGEM1	lncRNA	ANTISENSE	ENSG00000227418	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_2q32.3	HERV	HERVL74	prototype	chr2	192762598	192765000	-	noncoding	PCGEM1	lncRNA	ANTISENSE	ENSG00000227418	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2q32.3c	HERV	HERVH	prototype	chr2	192918303	192924835	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PCGEM1	ENSG00000227418	141404	AC096647.1	ENSG00000286358	245869	None	None
MER61_2q32.3a	HERV	MER61	oneside	chr2	193501013	193503662	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074290.1	ENSG00000224219	226893	AC092638.2	ENSG00000235218	223399	None	chr2:193502765-193502798,chr2:193502820-193502829
MER61_2q32.3b	HERV	MER61	internal	chr2	193503709	193504263	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074290.1	ENSG00000224219	226292	AC092638.2	ENSG00000235218	226095	None	None
ERVLE_2q32.3c	HERV	ERVLE	internal	chr2	193581471	193582299	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092638.2	ENSG00000235218	303857	AC074290.1	ENSG00000224219	148256	None	None
ERV316A3_2q32.3b	HERV	ERV316A3	internal	chr2	193844357	193845885	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074290.2	ENSG00000286868	21837	AC074290.1	ENSG00000224219	113668	None	None
HERVH_2q32.3d	HERV	HERVH	prototype	chr2	194130702	194136554	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA1P47	ENSG00000236695	50825	GLULP6	ENSG00000215043	436	None	None
HERVP71A_2q32.3	HERV	HERVP71A	prototype	chr2	194154758	194163177	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA1P47	ENSG00000236695	24202	GLULP6	ENSG00000215043	24492	None	None
ERVLE_2q32.3d	HERV	ERVLE	internal	chr2	194199332	194201491	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01821	ENSG00000225539	142699	HNRNPA1P47	ENSG00000236695	11023	None	None
ERVL_2q32.3	HERV	ERVL	internal	chr2	194509942	194512647	-	noncoding	LINC01821	lncRNA	ANTISENSE	ENSG00000225539	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_2q32.3	HERV	HUERSP3B	prototype	chr2	194602578	194611487	+	noncoding	AC073973.1	lncRNA	SENSE	ENSG00000286539	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q32.3c	HERV	ERV316A3	internal	chr2	194693299	194694027	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006196.1	ENSG00000252517	29125	LINC01790	ENSG00000230173	36568	None	None
ERVLE_2q32.3e	HERV	ERVLE	internal	chr2	194733834	194736468	-	noncoding	LINC01790	lncRNA	ANTISENSE	ENSG00000230173	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER34B_2q32.3	HERV	MER34B	oneside	chr2	195263012	195263808	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010983.1	ENSG00000235056	236642	AC104823.1	ENSG00000224099	184724	None	None
MER101_2q32.3	HERV	MER101	oneside	chr2	195278701	195282752	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010983.1	ENSG00000235056	252331	AC104823.1	ENSG00000224099	165780	None	None
HERVW_2q32.3	HERV	HERVW	prototype	chr2	195334677	195340075	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104823.1	ENSG00000224099	108457	AC010983.1	ENSG00000235056	308307	None	None
ERVLE_2q32.3f	HERV	ERVLE	internal	chr2	195942581	195945121	-	noncoding	DNAH7	protein_coding	SENSE	ENSG00000118997	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_2q32.3a	HERV	LTR25	internal	chr2	196124161	196131057	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STK17B	ENSG00000081320	2526	DNAH7	ENSG00000118997	55324	None	chr2:196125802-196125811
LTR25_2q32.3b	HERV	LTR25	internal	chr2	196131088	196132431	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STK17B	ENSG00000081320	1152	DNAH7	ENSG00000118997	62251	None	None
HERVP71A_2q33.1	HERV	HERVP71A	prototype	chr2	196830363	196832033	-	noncoding	AC012486.1	TEC	SENSE	ENSG00000280176	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER101_2q33.1	HERV	MER101	oneside	chr2	196851115	196854775	+	noncoding	PGAP1	protein_coding	ANTISENSE	ENSG00000197121	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q33.1a	HERV	ERVLE	internal	chr2	197313057	197317919	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010746.2	ENSG00000225979	317	NPM1P46	ENSG00000213104	61782	None	None
HERVH_2q33.1a	HERV	HERVH	prototype	chr2	197578410	197587726	+	noncoding	RFTN2	protein_coding	ANTISENSE	ENSG00000162944	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q33.1b	HERV	ERVLE	internal	chr2	198631690	198632717	+	noncoding	AC019330.1	lncRNA	ANTISENSE	ENSG00000225421	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q33.1a	HERV	ERV316A3	internal	chr2	198945854	198948341	+	noncoding	AC020718.1	lncRNA	ANTISENSE	ENSG00000231557	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q33.1b	HERV	ERV316A3	oneside	chr2	198948861	198950472	+	noncoding	AC020718.1	lncRNA	ANTISENSE	ENSG00000231557	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q33.1c	HERV	ERVLE	internal	chr2	198995691	198999477	+	noncoding	AC020718.1	lncRNA	ANTISENSE	ENSG00000231557	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q33.1c	HERV	ERV316A3	internal	chr2	199139172	199140174	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-147P	ENSG00000238698	50885	AC018717.1	ENSG00000230407	29084	None	None
ERV316A3_2q33.1d	HERV	ERV316A3	prototype	chr2	199146953	199151327	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018717.1	ENSG00000230407	36865	RNU7-147P	ENSG00000238698	39732	None	None
HERVH_2q33.1b	HERV	HERVH	prototype	chr2	199179365	199185671	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018717.1	ENSG00000230407	69277	RNU7-147P	ENSG00000238698	5388	None	None
HERVL18_2q33.1	HERV	HERVL18	prototype	chr2	199223786	199230424	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SATB2	ENSG00000119042	39076	RNU7-147P	ENSG00000238698	32666	chr2:199229314-199229437	None
HERVH_2q33.1c	HERV	HERVH	prototype	chr2	199247247	199252648	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-147P	ENSG00000238698	56127	SATB2	ENSG00000119042	16852	None	None
ERV316A3_2q33.1e	HERV	ERV316A3	oneside	chr2	199613737	199617980	-	noncoding	LINC01877	lncRNA	ANTISENSE	ENSG00000238217	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q33.1f	HERV	ERV316A3	oneside	chr2	199705744	199707138	-	noncoding	LINC01877	lncRNA	ANTISENSE	ENSG00000238217	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q33.1g	HERV	ERV316A3	oneside	chr2	199772560	199775568	-	noncoding	FTCDNL1	protein_coding	SENSE	ENSG00000226124	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_2q33.1	HERV	MER41	prototype	chr2	200552394	200557622	-	noncoding	SGO2	protein_coding	ANTISENSE	ENSG00000163535	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q33.1h	HERV	ERV316A3	internal	chr2	200674288	200675166	+	noncoding	AOX1	protein_coding	SENSE	ENSG00000138356	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q33.1d	HERV	ERVLE	internal	chr2	201055724	201058023	+	noncoding	FAM126B	protein_coding	ANTISENSE	ENSG00000155744	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_2q33.1	HERV	HERVL40	tandem*	chr2	201515030	201519159	-	noncoding	C2CD6	protein_coding	SENSE	ENSG00000155754	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q33.1	HERV	ERVLB4	oneside	chr2	201567350	201570350	-	noncoding	C2CD6	protein_coding	SENSE	ENSG00000155754	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q33.2	HERV	ERV316A3	prototype	chr2	203846166	203852533	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-474P	ENSG00000206970	64023	CTLA4	ENSG00000163599	15238	None	None
HERVH_2q33.2	HERV	HERVH	prototype	chr2	203961942	203967634	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009965.2	ENSG00000235951	98072	ICOS	ENSG00000163600	365	None	None
ERVLE_2q33.3	HERV	ERVLE	internal	chr2	204400944	204402890	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016903.1	ENSG00000236634	67186	AC106901.1	ENSG00000225304	21152	None	None
ERV316A3_2q33.3a	HERV	ERV316A3	oneside	chr2	205871130	205876307	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NRP2	ENSG00000118257	72997	RN7SKP178	ENSG00000201875	24323	None	None
ERV316A3_2q33.3b	HERV	ERV316A3	prototype	chr2	206326051	206330025	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC017081.1	ENSG00000180105	80062	ZDBF2	ENSG00000204186	11624	None	None
HERVL74_2q33.3a	HERV	HERVL74	internal	chr2	206346090	206348323	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC017081.1	ENSG00000180105	61764	ZDBF2	ENSG00000204186	31663	None	None
HERVL74_2q33.3b	HERV	HERVL74	internal	chr2	206350861	206351441	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC017081.1	ENSG00000180105	58646	ZDBF2	ENSG00000204186	36434	None	None
HERVL_2q33.3	HERV	HERVL	oneside	chr2	206741315	206743177	+	noncoding	MDH1B	protein_coding	ANTISENSE	ENSG00000138400	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_2q33.3a	HERV	HERVH	prototype	chr2	206806840	206812627	-	noncoding	AC008269.1	lncRNA	ANTISENSE	ENSG00000229321	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_2q33.3b	HERV	HERVH	prototype	chr2	207017218	207023284	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CPO	ENSG00000144410	47744	KLF7	ENSG00000118263	50853	None	None
HARLEQUIN_2q33.3	HERV	HARLEQUIN	internal	chr2	208114888	208116803	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CRYGEP	ENSG00000229150	2377	CRYGD	ENSG00000118231	4804	None	None
ERV316A3_2q33.3c	HERV	ERV316A3	oneside	chr2	208147257	208148246	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CRYGA	ENSG00000168582	12494	CRYGB	ENSG00000182187	1099	None	None
HERVH_2q34a	HERV	HERVH	prototype	chr2	208215925	208221935	-	noncoding	TPT1P2	processed_pseudogene	SENSE	ENSG00000228111	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q34a	HERV	ERVLE	internal	chr2	208280271	208282358	-	noncoding	PIKFYVE	protein_coding	ANTISENSE	ENSG00000115020	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_2q34	HERV	HUERSP3	oneside	chr2	208389905	208398026	-	noncoding	PTH2R	protein_coding	ANTISENSE	ENSG00000144407	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q34a	HERV	ERV316A3	internal	chr2	208661800	208664596	+	noncoding	PTH2R	protein_coding	SENSE	ENSG00000144407	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2q34b	HERV	HERVH	oneside	chr2	208900115	208905467	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC109824.1	ENSG00000287662	11972	RNA5SP117	ENSG00000202164	15080	None	None
ERVLE_2q34b	HERV	ERVLE	internal	chr2	208929415	208931956	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP117	ENSG00000202164	8751	HSPA8P6	ENSG00000235864	140641	None	None
MER41_2q34	HERV	MER41	internal	chr2	209004920	209005696	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP117	ENSG00000202164	84256	HSPA8P6	ENSG00000235864	66901	None	None
MER61_2q34a	HERV	MER61	internal	chr2	209005697	209006290	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP117	ENSG00000202164	85033	HSPA8P6	ENSG00000235864	66307	None	None
HERVH_2q34c	HERV	HERVH	prototype	chr2	209078020	209084376	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSPA8P6	ENSG00000235864	3872	CRYGFP	ENSG00000232799	60865	None	None
HERVH_2q34d	HERV	HERVH	prototype	chr2	209299313	209304932	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MEAF6P1	ENSG00000240286	117295	AC016743.1	ENSG00000286249	49045	None	chr2:209299688-209299691
ERV316A3_2q34b	HERV	ERV316A3	oneside	chr2	210237690	210241376	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097525.1	ENSG00000199203	24587	AC006994.2	ENSG00000279317	3714	None	None
HERVIP10F_2q34	HERV	HERVIP10F	oneside	chr2	210365307	210370183	-	noncoding	LANCL1-AS1	lncRNA	ANTISENSE	ENSG00000234281	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11_2q34a	HERV	HERVK11	prototype	chr2	210424479	210428103	-	noncoding	LANCL1-AS1	lncRNA	ANTISENSE	ENSG00000234281	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q34c	HERV	ERV316A3	oneside	chr2	210882425	210886739	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CPS1	ENSG00000021826	203318	AC012491.1	ENSG00000271074	218195	None	None
HERVL_2q34a	HERV	HERVL	oneside	chr2	211135601	211141020	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012491.1	ENSG00000271074	29869	AC013404.1	ENSG00000231017	157921	None	None
HERVH_2q34e	HERV	HERVH	prototype	chr2	211261807	211267653	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012491.1	ENSG00000271074	156075	AC013404.1	ENSG00000231017	31288	None	None
ERVLE_2q34c	HERV	ERVLE	internal	chr2	211307133	211308352	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ERBB4	ENSG00000178568	67365	AC013404.1	ENSG00000231017	7944	None	None
MER61_2q34b	HERV	MER61	oneside	chr2	211347153	211348064	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ERBB4	ENSG00000178568	27653	AC013404.1	ENSG00000231017	47964	None	None
ERV316A3_2q34d	HERV	ERV316A3	oneside	chr2	211714215	211715439	+	noncoding	ERBB4	protein_coding	ANTISENSE	ENSG00000178568	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q34	HERV	ERVLB4	oneside	chr2	212131490	212132744	+	noncoding	ERBB4	protein_coding	ANTISENSE	ENSG00000178568	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2q34b	HERV	HERVL	prototype	chr2	212440123	212446678	+	noncoding	ERBB4	protein_coding	ANTISENSE	ENSG00000178568	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q34e	HERV	ERV316A3	prototype	chr2	212802265	212807530	+	noncoding	AC093865.1,LINC01878	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000273118,ENSG00000234308	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q34d	HERV	ERVLE	oneside	chr2	212896482	212899373	-	noncoding	AC093865.1	lncRNA	SENSE	ENSG00000273118	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q34e	HERV	ERVLE	internal	chr2	213044484	213048020	+	noncoding	IKZF2	protein_coding	ANTISENSE	ENSG00000030419	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q34f	HERV	ERVLE	internal	chr2	213204813	213205801	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079610.2	ENSG00000272519	61194	LINC01953	ENSG00000236193	37101	None	None
HERVL_2q34c	HERV	HERVL	oneside	chr2	213377837	213381302	-	noncoding	SPAG16	protein_coding	ANTISENSE	ENSG00000144451	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q34g	HERV	ERVLE	internal	chr2	213381340	213383043	-	noncoding	SPAG16	protein_coding	ANTISENSE	ENSG00000144451	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q34f	HERV	ERV316A3	internal	chr2	213383742	213385791	-	noncoding	SPAG16	protein_coding	ANTISENSE	ENSG00000144451	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_2q34	HERV	HARLEQUIN	internal	chr2	213406782	213411947	+	noncoding	SPAG16	protein_coding	SENSE	ENSG00000144451	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11_2q34b	HERV	HERVK11	oneside	chr2	213446565	213449649	+	noncoding	SPAG16	protein_coding	SENSE	ENSG00000144451	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2q34d	HERV	HERVL	prototype	chr2	213468740	213474965	-	noncoding	SPAG16	protein_coding	ANTISENSE	ENSG00000144451	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q34h	HERV	ERVLE	prototype	chr2	213650106	213651751	-	noncoding	SPAG16	protein_coding	ANTISENSE	ENSG00000144451	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q35a	HERV	ERV316A3	internal	chr2	214847747	214849856	-	noncoding	SNHG31	lncRNA	ANTISENSE	ENSG00000229267	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q35b	HERV	ERV316A3	oneside	chr2	214866562	214870502	+	noncoding	SNHG31	lncRNA	SENSE	ENSG00000229267	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q35c	HERV	ERV316A3	internal	chr2	214879116	214880279	+	noncoding	SNHG31	lncRNA	SENSE	ENSG00000229267	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2q35a	HERV	HERVH	prototype	chr2	215089939	215096031	+	noncoding	ABCA12	protein_coding	ANTISENSE	ENSG00000144452	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_2q35	HERV	MER4	prototype	chr2	215204358	215213781	+	coding	AC092844.1	lncRNA	ANTISENSE	ENSG00000286836	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q35d	HERV	ERV316A3	oneside	chr2	215517380	215518738	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012668.2	ENSG00000234938	11709	AC012462.1	ENSG00000225166	30741	None	None
HERVH_2q35b	HERV	HERVH	prototype	chr2	215922303	215928126	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC122136.1	ENSG00000227824	51785	AC093382.1	ENSG00000226276	11182	None	None
ERV316A3_2q35e	HERV	ERV316A3	oneside	chr2	215940647	215942020	-	noncoding	AC093382.1	lncRNA	SENSE	ENSG00000226276	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q35f	HERV	ERV316A3	prototype	chr2	216034255	216036830	+	noncoding	PECR	protein_coding	ANTISENSE	ENSG00000115425	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_2q35a	HERV	MER101	internal	chr2	216213296	216216431	-	noncoding	AC012513.3	TEC	ANTISENSE	ENSG00000279348	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
LTR57_2q35	HERV	LTR57	internal	chr2	216215055	216216151	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01963	ENSG00000260804	894	AC012513.3	ENSG00000279348	1536	None	None
ERVLE_2q35a	HERV	ERVLE	internal	chr2	216510740	216513481	+	noncoding	RPL37A	protein_coding	SENSE	ENSG00000197756	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q35g	HERV	ERV316A3	oneside	chr2	216817389	216818465	+	noncoding	AC007563.2	lncRNA	SENSE	ENSG00000236886	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_2q35	HERV	HERVW	oneside	chr2	217590846	217592765	-	noncoding	DIRC3	lncRNA	SENSE	ENSG00000231672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q35b	HERV	ERVLE	internal	chr2	217770591	217772071	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7L1P9	ENSG00000231035	9300	TNS1	ENSG00000079308	27517	None	None
MER34B_2q35	HERV	MER34B	internal	chr2	218042417	218047874	-	noncoding	RUFY4	protein_coding	ANTISENSE	ENSG00000188282	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:218046391-218046629	None
MER101_2q35b	HERV	MER101	internal	chr2	218050832	218052950	+	noncoding	RUFY4	protein_coding	SENSE	ENSG00000188282	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_2q35a	HERV	HERV9	oneside	chr2	218108692	218112255	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CXCR2	ENSG00000180871	13034	RUFY4	ENSG00000188282	18111	None	None
HML3_2q35	HERV	HML3	prototype	chr2	218112256	218117006	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RUFY4	ENSG00000188282	21675	CXCR2	ENSG00000180871	8283	None	None
HERV9_2q35b	HERV	HERV9	oneside	chr2	218117007	218122161	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CXCR2	ENSG00000180871	3128	RUFY4	ENSG00000188282	26426	None	None
HERVH_2q35c	HERV	HERVH	prototype	chr2	218174020	218179886	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB1P9	ENSG00000224159	20548	CXCR1	ENSG00000163464	7058	None	None
HUERSP3B_2q35	HERV	HUERSP3B	internal	chr2	218349659	218352487	-	noncoding	CATIP-AS2	lncRNA	SENSE	ENSG00000237281	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q35h	HERV	ERV316A3	oneside	chr2	218537782	218542252	+	noncoding	USP37	protein_coding	ANTISENSE	ENSG00000135913	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_2q35	HERV	MER61	oneside	chr2	218793927	218798599	-	noncoding	CYP27A1	protein_coding	ANTISENSE	ENSG00000135929	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_2q35	HERV	PRIMA41	oneside	chr2	219581690	219588188	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP213	ENSG00000222678	2499	INHA	ENSG00000123999	5979	None	None
ERV316A3_2q35i	HERV	ERV316A3	prototype	chr2	220028737	220033584	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008281.1	ENSG00000286199	115903	AC009310.1	ENSG00000225911	15238	None	chr2:220031423-220031426
HUERSP1_2q35	HERV	HUERSP1	oneside	chr2	220157677	220159779	-	noncoding	AC019211.1,AC093083.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000239498,ENSG00000235337	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q35c	HERV	ERVLE	internal	chr2	220321078	220321826	+	noncoding	AC019211.1	lncRNA	SENSE	ENSG00000239498	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q35j	HERV	ERV316A3	prototype	chr2	220447112	220451110	+	noncoding	AC019211.1,AC067956.1	lncRNA,lncRNA	SENSE,SENSE	ENSG00000239498,ENSG00000236451	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_2q35a	HERV	HERVL	prototype	chr2	220536825	220543740	-	noncoding	AC067956.1	lncRNA	ANTISENSE	ENSG00000236451	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_2q35b	HERV	HERVL	oneside	chr2	220605039	220606860	-	noncoding	AC067956.1	lncRNA	ANTISENSE	ENSG00000236451	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q36.1a	HERV	ERVLB4	internal	chr2	221753635	221754755	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068489.1	ENSG00000234446	103417	AC009302.1	ENSG00000233868	189468	None	None
ERV316A3_2q36.1a	HERV	ERV316A3	internal	chr2	222018453	222021688	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSPA9P1	ENSG00000226666	54688	RPL23AP28	ENSG00000226331	22837	None	None
MER4_2q36.1	HERV	MER4	oneside	chr2	222413266	222416636	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010980.1	ENSG00000200822	8171	SGPP2	ENSG00000163082	7907	None	None
HERVL_2q36.1a	HERV	HERVL	oneside	chr2	222434926	222439361	-	coding	SGPP2	protein_coding	ANTISENSE	ENSG00000163082	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_2q36.1	HERV	MER101	internal	chr2	222765791	222769316	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC016712.1	ENSG00000235225	38957	ACSL3	ENSG00000123983	91626	None	None
HERVH_2q36.1a	HERV	HERVH	prototype	chr2	223188780	223195505	-	noncoding	KCNE4	protein_coding	ANTISENSE	ENSG00000152049	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_2q36.1b	HERV	HERVL	prototype	chr2	223295924	223302936	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL807P	ENSG00000243125	47130	HIGD1AP4	ENSG00000233299	95331	None	None
ERV316A3_2q36.1b	HERV	ERV316A3	prototype	chr2	224070656	224072644	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC019109.1	ENSG00000224826	97020	SERPINE2	ENSG00000135919	31338	None	None
HERVL32_2q36.1	HERV	HERVL32	prototype	chr2	224073686	224079557	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC019109.1	ENSG00000224826	90107	SERPINE2	ENSG00000135919	34368	None	None
HERVH_2q36.1b	HERV	HERVH	prototype	chr2	224087354	224093515	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC019109.1	ENSG00000224826	76149	SERPINE2	ENSG00000135919	48036	None	None
ERVLB4_2q36.1b	HERV	ERVLB4	prototype	chr2	224103652	224107998	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC019109.1	ENSG00000224826	61666	SERPINE2	ENSG00000135919	64334	None	None
HERVH_2q36.1c	HERV	HERVH	prototype	chr2	224225331	224230986	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC019109.1	ENSG00000224826	53794	AC008072.1	ENSG00000228681	63944	None	None
HERVH_2q36.1d	HERV	HERVH	prototype	chr2	224296633	224302363	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008072.1	ENSG00000228681	880	FAM124B	ENSG00000124019	76335	None	None
ERV316A3_2q36.2	HERV	ERV316A3	oneside	chr2	224827741	224830374	+	noncoding	DOCK10	protein_coding	ANTISENSE	ENSG00000135905	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q36.2	HERV	ERVLE	internal	chr2	225165973	225168652	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NYAP2	ENSG00000144460	231058	DOCK10	ENSG00000135905	123528	None	None
ERVLB4_2q36.3	HERV	ERVLB4	oneside	chr2	225336560	225338508	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DOCK10	ENSG00000135905	294115	NYAP2	ENSG00000144460	61202	None	None
ERV316A3_2q36.3a	HERV	ERV316A3	oneside	chr2	225508460	225509765	-	noncoding	NYAP2	protein_coding	ANTISENSE	ENSG00000144460	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q36.3a	HERV	ERVLE	prototype	chr2	226226071	226231862	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC062015.1	ENSG00000235070	40700	MIR5702	ENSG00000263363	426848	None	None
ERV316A3_2q36.3b	HERV	ERV316A3	prototype	chr2	226350295	226352386	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR5702	ENSG00000263363	306324	AC062015.1	ENSG00000235070	164924	None	None
ERV316A3_2q36.3c	HERV	ERV316A3	oneside	chr2	226419339	226422771	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR5702	ENSG00000263363	235939	AC062015.1	ENSG00000235070	233968	chr2:226421375-226421773	None
ERVLE_2q36.3b	HERV	ERVLE	internal	chr2	226605006	226605813	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR5702	ENSG00000263363	52897	AC062015.1	ENSG00000235070	419635	None	None
ERVLE_2q36.3c	HERV	ERVLE	internal	chr2	227856902	227859716	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TDGF1P2	ENSG00000183514	10367	CCL20	ENSG00000115009	39338	None	None
HUERSP3_2q36.3	HERV	HUERSP3	prototype	chr2	228299817	228309450	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074019.1	ENSG00000203387	42670	SPHKAP	ENSG00000153820	118130	None	None
ERV316A3_2q36.3d	HERV	ERV316A3	internal	chr2	228336903	228338384	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPHKAP	ENSG00000153820	155216	AC074019.1	ENSG00000203387	13736	None	None
ERVLE_2q36.3d	HERV	ERVLE	internal	chr2	228338769	228341491	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPHKAP	ENSG00000153820	157082	AC074019.1	ENSG00000203387	10629	None	None
LTR57_2q36.3	HERV	LTR57	prototype	chr2	228367451	228374329	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074019.1	ENSG00000203387	14236	AC009410.1	ENSG00000286772	4171	None	None
MER4_2q36.3a	HERV	MER4	oneside	chr2	228531413	228532855	+	noncoding	LINC01807	lncRNA	ANTISENSE	ENSG00000232023	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_2q36.3	HERV	MER4B	internal	chr2	228532926	228535315	+	noncoding	LINC01807	lncRNA	ANTISENSE	ENSG00000232023	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_2q36.3b	HERV	MER4	oneside	chr2	228535443	228538750	+	noncoding	LINC01807	lncRNA	ANTISENSE	ENSG00000232023	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q36.3e	HERV	ERVLE	internal	chr2	228600228	228601553	-	noncoding	LINC01807	lncRNA	SENSE	ENSG00000232023	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q36.3f	HERV	ERVLE	internal	chr2	228914491	228917849	+	noncoding	PID1	protein_coding	ANTISENSE	ENSG00000153823	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_2q36.3	HERV	MER101	internal	chr2	230029828	230031551	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC16A14	ENSG00000163053	3431	FBXO36	ENSG00000153832	16709	None	None
HERVL_2q37.1	HERV	HERVL	prototype	chr2	230119588	230123285	+	noncoding	AC009950.1	lncRNA	SENSE	ENSG00000225963	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q37.1a	HERV	ERV316A3	oneside	chr2	230403818	230406889	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SP140L	ENSG00000185404	86	AC009949.1	ENSG00000279964	3811	None	None
ERVL_2q37.1	HERV	ERVL	internal	chr2	230546675	230547350	+	noncoding	AC010149.1	lncRNA	ANTISENSE	ENSG00000235419	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_2q37.1	HERV	HML5	oneside	chr2	231091002	231096573	-	noncoding	PSMD1	protein_coding	ANTISENSE	ENSG00000173692	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_2q37.1	HERV	HERVIP10F	prototype	chr2	231096574	231100693	-	noncoding	PSMD1	protein_coding	ANTISENSE	ENSG00000173692	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:231100290-231100295
HERVIP10FH_2q37.1	HERV	HERVIP10FH	internal	chr2	231098104	231098700	-	noncoding	PSMD1	protein_coding	ANTISENSE	ENSG00000173692	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_2q37.1	HERV	HERVE	prototype	chr2	231400712	231408843	+	coding	B3GNT7	protein_coding	SENSE	ENSG00000156966	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVH_2q37.1a	HERV	HERVH	oneside	chr2	231430886	231432394	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZBTB8OSP2	ENSG00000172799	1529	B3GNT7	ENSG00000156966	29722	None	None
ERVLE_2q37.1	HERV	ERVLE	internal	chr2	232157475	232158198	-	noncoding	DIS3L2	protein_coding	ANTISENSE	ENSG00000144535	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_2q37.1	HERV	LTR57	internal	chr2	232393184	232394107	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ECEL1P2	ENSG00000244280	5727	ALPG	ENSG00000163286	12737	None	None
MER101_2q37.1	HERV	MER101	internal	chr2	232395334	232398361	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ECEL1P2	ENSG00000244280	7877	ALPG	ENSG00000163286	8483	None	None
ERVLB4_2q37.1a	HERV	ERVLB4	internal	chr2	232585232	232586053	-	noncoding	AC073254.1	lncRNA	SENSE	ENSG00000237126	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q37.1b	HERV	ERVLB4	internal	chr2	232867729	232869107	-	noncoding	SNORC	protein_coding	ANTISENSE	ENSG00000182600	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_2q37.1b	HERV	HERVH	prototype	chr2	233214800	233217821	-	noncoding	ATG16L1	protein_coding	ANTISENSE	ENSG00000085978	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2q37.1b	HERV	ERV316A3	internal	chr2	234616758	234619051	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARL4C	ENSG00000188042	119677	LINC01173	ENSG00000280744	63617	None	None
ERV316A3_2q37.2a	HERV	ERV316A3	internal	chr2	234797371	234798031	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104394.1	ENSG00000278593	51765	AC010148.1	ENSG00000235726	5777	None	None
ERV316A3_2q37.2b	HERV	ERV316A3	prototype	chr2	235197910	235199341	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AGAP1	ENSG00000157985	294702	AC114814.3	ENSG00000235293	19005	None	None
ERVLE_2q37.3a	HERV	ERVLE	internal	chr2	237115095	237116613	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	COPS8	ENSG00000198612	14621	AC107079.1	ENSG00000224844	6297	None	None
ERVLE_2q37.3b	HERV	ERVLE	internal	chr2	237234110	237236031	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC112715.1	ENSG00000224132	21060	AC107079.1	ENSG00000224844	110013	None	None
ERVLE_2q37.3c	HERV	ERVLE	internal	chr2	237241635	237243000	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107079.1	ENSG00000224844	117538	AC112715.1	ENSG00000224132	14091	None	None
HERVL_2q37.3	HERV	HERVL	oneside	chr2	237243439	237247012	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC112715.1	ENSG00000224132	10079	AC107079.1	ENSG00000224844	119342	chr2:237245062-237245445	chr2:237244973-237244978
ERVLB4_2q37.3a	HERV	ERVLB4	oneside	chr2	237247001	237250455	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC112715.1	ENSG00000224132	6636	AC107079.1	ENSG00000224844	122904	None	None
ERVLE_2q37.3d	HERV	ERVLE	internal	chr2	237302211	237307008	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	COL6A3	ENSG00000163359	16995	AC112715.1	ENSG00000224132	44535	chr2:237306215-237306421	None
ERVLE_2q37.3e	HERV	ERVLE	internal	chr2	237477585	237479671	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MLPH	ENSG00000115648	5757	AC112721.2	ENSG00000222032	42763	None	None
HERVH_2q37.3	HERV	HERVH	prototype	chr2	237606784	237612654	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAB17	ENSG00000124839	5170	AC104667.1	ENSG00000227107	323	None	None
HERVFH19_2q37.3	HERV	HERVFH19	oneside	chr2	238204918	238211673	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02610	ENSG00000186235	12879	ILKAP	ENSG00000132323	1210	None	None
ERV316A3_2q37.3a	HERV	ERV316A3	oneside	chr2	238304163	238309918	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRAF3IP1	ENSG00000204104	10523	AC012485.2	ENSG00000232306	3543	None	None
ERVLE_2q37.3f	HERV	ERVLE	internal	chr2	238459195	238459878	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01107	ENSG00000225493	50812	AC016999.2	ENSG00000274346	1675	None	None
HERVW_2q37.3	HERV	HERVW	oneside	chr2	238980515	238982406	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HDAC4	ENSG00000068024	65762	LINC01940	ENSG00000227744	54246	None	None
ERV316A3_2q37.3b	HERV	ERV316A3	oneside	chr2	239911911	239913614	-	noncoding	NDUFA10	protein_coding	SENSE	ENSG00000130414	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q37.3g	HERV	ERVLE	internal	chr2	240141187	240142329	-	noncoding	OTOS	protein_coding	SENSE	ENSG00000178602	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_2q37.3	HERV	MER34B	internal	chr2	240414262	240417234	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC124861.2	ENSG00000276366	124819	GPC1	ENSG00000063660	18429	None	None
ERV316A3_2q37.3c	HERV	ERV316A3	internal	chr2	240601329	240603738	-	noncoding	CAPN10	protein_coding	ANTISENSE	ENSG00000142330	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_2q37.3h	HERV	ERVLE	internal	chr2	240883623	240885761	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAB21L4	ENSG00000172478	287	AGXT	ENSG00000172482	3121	None	None
HERVL40_2q37.3	HERV	HERVL40	oneside	chr2	241017184	241020543	-	noncoding	SNED1,AC005237.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000162804,ENSG00000225521	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2q37.3b	HERV	ERVLB4	internal	chr2	241574252	241575873	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BOK	ENSG00000176720	121	AC133528.1	ENSG00000273113	6049	None	None
MER4_2q37.3a	HERV	MER4	oneside	chr2	241778595	241786822	-	noncoding	GAL3ST2	protein_coding	ANTISENSE	ENSG00000154252	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_2q37.3b	HERV	MER4	prototype	chr2	241786859	241793200	+	noncoding	GAL3ST2	protein_coding	SENSE	ENSG00000154252	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:241788599-241788979	None
MER4B_2q37.3	HERV	MER4B	internal	chr2	241834547	241837304	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC131097.3	ENSG00000235151	7076	NEU4	ENSG00000204099	17134	None	None
MER101_2q37.3	HERV	MER101	internal	chr2	241838232	241840192	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC131097.3	ENSG00000235151	4188	NEU4	ENSG00000204099	20819	None	None
HERVL_3p26.3a	HERV	HERVL	prototype	chr3	440359	446863	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087428.1	ENSG00000287505	77149	CHL1	ENSG00000134121	30942	None	None
HERVE_3p26.3	HERV	HERVE	prototype	chr3	846924	853933	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01266	ENSG00000224957	363	AC090044.1	ENSG00000224239	3191	None	None
HERVH_3p26.3a	HERV	HERVH	prototype	chr3	890694	896413	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087430.1	ENSG00000235158	111722	AC090044.1	ENSG00000224239	32603	None	None
HERVL_3p26.3b	HERV	HERVL	oneside	chr3	983746	988656	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087430.1	ENSG00000235158	19479	AC090044.1	ENSG00000224239	125655	None	None
HERVH_3p26.3b	HERV	HERVH	prototype	chr3	1240737	1245092	-	noncoding	CNTN6	protein_coding	ANTISENSE	ENSG00000134115	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3p26.3	HERV	ERV316A3	internal	chr3	1670094	1670796	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL23AP39	ENSG00000214074	59274	RPL23AP38	ENSG00000184423	73849	None	None
HERVIP10F_3p26.3	HERV	HERVIP10F	prototype	chr3	1888555	1892710	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL23AP39	ENSG00000214074	158081	RPL21P17	ENSG00000214073	12941	None	None
HERVL_3p26.3c	HERV	HERVL	oneside	chr3	1921268	1926923	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL21P17	ENSG00000214073	15143	AC018814.1	ENSG00000225044	35458	None	None
ERVLB4_3p26.2a	HERV	ERVLB4	internal	chr3	3563493	3564556	-	noncoding	AC034195.1	lncRNA	SENSE	ENSG00000223727	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3p26.2	HERV	HERVL	prototype	chr3	3828106	3835001	-	noncoding	SUMF1,LRRN1	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000144455,ENSG00000175928	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3p26.2b	HERV	ERVLB4	prototype	chr3	3928386	3929629	-	noncoding	SUMF1,AC023480.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000144455,ENSG00000287720	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3p26.1a	HERV	HERVL	prototype	chr3	4127291	4133860	+	noncoding	SUMF1	protein_coding	ANTISENSE	ENSG00000144455	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3p26.1	HERV	ERV316A3	oneside	chr3	4470242	4472991	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ITPR1-DT	ENSG00000231249	17900	SUMF1	ENSG00000144455	2969	None	None
HERVP71A_3p26.1	HERV	HERVP71A	prototype	chr3	5140823	5149820	-	noncoding	ARL8B	protein_coding	ANTISENSE	ENSG00000134108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:5140938-5141212,chr3:5149478-5149701	chr3:5141161-5141167,chr3:5140938-5140942
HERVIP10F_3p26.1	HERV	HERVIP10F	prototype	chr3	5691017	5699755	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087857.1	ENSG00000229642	263087	AC026202.1	ENSG00000230944	434256	None	chr3:5698930-5698942,chr3:5699346-5699375,chr3:5698904-5698911
HERVIP10FH_3p26.1a	HERV	HERVIP10FH	internal	chr3	5694627	5695645	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087857.1	ENSG00000229642	267197	AC026202.1	ENSG00000230944	437866	None	None
HARLEQUIN_3p26.1	HERV	HARLEQUIN	internal	chr3	5701383	5704206	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087857.1	ENSG00000229642	258636	AC026202.1	ENSG00000230944	444622	None	None
HERVIP10FH_3p26.1b	HERV	HERVIP10FH	oneside	chr3	5706470	5708978	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087857.1	ENSG00000229642	253864	AC026202.1	ENSG00000230944	449709	None	None
HERVL_3p26.1b	HERV	HERVL	prototype	chr3	6008607	6016090	+	coding	AC087857.1	lncRNA	SENSE	ENSG00000229642	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p26.1	HERV	ERVLE	internal	chr3	6395165	6396558	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069277.1	ENSG00000189229	93902	AC026167.1	ENSG00000226022	29280	None	None
HERVH_3p26.1	HERV	HERVH	oneside	chr3	6397587	6403075	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026167.1	ENSG00000226022	31702	AC069277.1	ENSG00000189229	87385	None	None
ERVLB4_3p26.1	HERV	ERVLB4	prototype	chr3	7351460	7357102	+	noncoding	GRM7	protein_coding	SENSE	ENSG00000196277	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_3p26.1	HERV	MER61	prototype	chr3	8015460	8021328	-	noncoding	LMCD1-AS1	lncRNA	SENSE	ENSG00000227110	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_3p25.3	HERV	HERVH	prototype	chr3	8177031	8182716	+	noncoding	LMCD1-AS1	lncRNA	ANTISENSE	ENSG00000227110	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_3p25.3a	HERV	HERVE	internal	chr3	8673356	8676083	+	noncoding	SSUH2	protein_coding	ANTISENSE	ENSG00000125046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_3p25.3b	HERV	HERVE	internal	chr3	8679702	8683824	+	noncoding	SSUH2,OR7E122P	protein_coding,transcribed_unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000125046,ENSG00000215160	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:8679865-8679900
ERVLB4_3p25.3	HERV	ERVLB4	oneside	chr3	8856391	8861358	+	noncoding	RAD18	protein_coding	ANTISENSE	ENSG00000070950	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLB_3p25.3a	HERV	PABLB	internal	chr3	9577233	9579350	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DUSP5P2	ENSG00000235338	21398	LHFPL4	ENSG00000156959	23411	None	None
PABLB_3p25.3b	HERV	PABLB	internal	chr3	9579644	9581905	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DUSP5P2	ENSG00000235338	18843	LHFPL4	ENSG00000156959	25822	None	None
HUERSP1_3p25.3a	HERV	HUERSP1	internal	chr3	9582098	9583438	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DUSP5P2	ENSG00000235338	17310	LHFPL4	ENSG00000156959	28276	None	None
HUERSP1_3p25.3b	HERV	HUERSP1	oneside	chr3	9630374	9635204	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTMR14	ENSG00000163719	14229	DUSP5P2	ENSG00000235338	27646	None	None
HUERSP1_3p25.3c	HERV	HUERSP1	oneside	chr3	9635796	9643306	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTMR14	ENSG00000163719	6127	DUSP5P2	ENSG00000235338	33068	None	None
HML2_3p25.3	HERV	HML2	prototype	chr3	9847662	9854552	-	coding	TTLL3	protein_coding	ANTISENSE	ENSG00000214021	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:9853780-9853793
HERVIP10F_3p25.3	HERV	HERVIP10F	prototype	chr3	11247258	11255176	-	noncoding	HRH1	protein_coding	ANTISENSE	ENSG00000196639	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3p25.2a	HERV	ERV316A3	internal	chr3	11812373	11813017	+	noncoding	TAMM41	protein_coding	ANTISENSE	ENSG00000144559	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3p25.2b	HERV	ERV316A3	internal	chr3	11928190	11929225	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL147P	ENSG00000263988	23563	MARK2P14	ENSG00000231897	15877	None	None
ERV316A3_3p25.2c	HERV	ERV316A3	internal	chr3	11929498	11931058	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL147P	ENSG00000263988	21730	MARK2P14	ENSG00000231897	17185	None	None
ERV316A3_3p25.2d	HERV	ERV316A3	oneside	chr3	12706372	12713168	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM40	ENSG00000088726	20360	CRIP1P1	ENSG00000233252	32489	None	None
HUERSP1_3p25.1	HERV	HUERSP1	oneside	chr3	13431986	13434085	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NUP210	ENSG00000132182	11664	AC027124.2	ENSG00000238138	26209	None	None
ERVLE_3p25.1	HERV	ERVLE	internal	chr3	13774931	13777799	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00620	ENSG00000224514	28293	WNT7A	ENSG00000154764	38459	None	None
PRIMA41_3p25.1a	HERV	PRIMA41	oneside	chr3	13938873	13941866	-	noncoding	TPRXL	transcribed_processed_pseudogene	ANTISENSE	ENSG00000180438	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_3p25.1b	HERV	PRIMA41	oneside	chr3	13948636	13953990	-	noncoding	TPRXL	transcribed_processed_pseudogene	ANTISENSE	ENSG00000180438	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:13950834-13950838
HERVIP10F_3p25.1a	HERV	HERVIP10F	oneside	chr3	13963013	13967501	-	noncoding	TPRXL	transcribed_processed_pseudogene	ANTISENSE	ENSG00000180438	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_3p25.1a	HERV	MER4	oneside	chr3	14024314	14031890	-	coding	TPRXL	transcribed_processed_pseudogene	ANTISENSE	ENSG00000180438	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_3p25.1b	HERV	MER4	oneside	chr3	14031956	14033419	-	noncoding	TPRXL	transcribed_processed_pseudogene	ANTISENSE	ENSG00000180438	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_3p25.1	HERV	HML6	prototype	chr3	14225058	14230262	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LSM3	ENSG00000170860	23936	AC093496.1	ENSG00000255021	42111	None	None
ERVL_3p25.1	HERV	ERVL	internal	chr3	14238679	14239284	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LSM3	ENSG00000170860	37557	AC093496.1	ENSG00000255021	33089	None	None
HERVIP10F_3p25.1b	HERV	HERVIP10F	prototype	chr3	16015486	16024234	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GALNT15	ENSG00000131386	150446	AC090946.1	ENSG00000286689	44233	None	None
ERV316A3_3p25.1	HERV	ERV316A3	oneside	chr3	16029909	16032360	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090946.1	ENSG00000286689	58656	GALNT15	ENSG00000131386	142320	None	None
ERVLE_3p24.3a	HERV	ERVLE	internal	chr3	16474761	16475780	+	noncoding	RFTN1	protein_coding	ANTISENSE	ENSG00000131378	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_3p24.3a	HERV	MER4	oneside	chr3	16670632	16676612	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DAZL	ENSG00000092345	326	AC091493.1	ENSG00000229271	11374	None	None
MER4_3p24.3b	HERV	MER4	oneside	chr3	16682755	16683892	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DAZL	ENSG00000092345	12449	AC091493.1	ENSG00000229271	4094	None	None
HERVH_3p24.3a	HERV	HERVH	prototype	chr3	16744186	16750064	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091493.1	ENSG00000229271	46707	PLCL2	ENSG00000154822	52587	None	None
PABLB_3p24.3	HERV	PABLB	prototype	chr3	16763827	16772528	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091493.1	ENSG00000229271	66348	PLCL2	ENSG00000154822	30123	None	None
HERVL_3p24.3a	HERV	HERVL	oneside	chr3	17590046	17595278	+	noncoding	TBC1D5	protein_coding	ANTISENSE	ENSG00000131374	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:17591231-17591232
HERV9_3p24.3	HERV	HERV9	prototype	chr3	17774262	17782406	+	noncoding	TBC1D5	protein_coding	ANTISENSE	ENSG00000131374	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3p24.3b	HERV	HERVL	oneside	chr3	18520245	18522067	+	noncoding	SATB1-AS1	lncRNA	SENSE	ENSG00000228956	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3p24.3c	HERV	HERVL	oneside	chr3	18941802	18946177	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SATB1-AS1	ENSG00000228956	21401	RNU6-138P	ENSG00000251761	8766	None	None
ERVLE_3p24.3b	HERV	ERVLE	internal	chr3	19023626	19025140	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCNH8	ENSG00000183960	123370	RNU6-138P	ENSG00000251761	68577	None	None
HERVEA_3p24.3a	HERV	HERVEA	oneside	chr3	19481910	19484114	-	noncoding	KCNH8,AC061958.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000183960,ENSG00000287069	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVEA_3p24.3b	HERV	HERVEA	oneside	chr3	19484214	19490699	-	noncoding	KCNH8,AC061958.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000183960,ENSG00000287069	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr3:19490094-19490226	None
HERVW_3p24.3	HERV	HERVW	oneside	chr3	19871765	19876641	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EFHB	ENSG00000163576	2831	AC061958.1	ENSG00000287069	168970	None	None
HERVL40_3p24.3	HERV	HERVL40	internal	chr3	19888926	19893646	+	noncoding	EFHB	protein_coding	ANTISENSE	ENSG00000163576	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:19889214-19889544	None
ERVLE_3p24.3c	HERV	ERVLE	internal	chr3	20360832	20361454	-	noncoding	SGO1-AS1	lncRNA	ANTISENSE	ENSG00000231304	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_3p24.3	HERV	HARLEQUIN	prototype	chr3	20363963	20371446	-	noncoding	SGO1-AS1	lncRNA	ANTISENSE	ENSG00000231304	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_3p24.3a	HERV	MER41	internal	chr3	20384418	20385540	+	noncoding	SGO1-AS1	lncRNA	SENSE	ENSG00000231304	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_3p24.3b	HERV	MER41	internal	chr3	20448123	20453049	-	noncoding	SGO1-AS1	lncRNA	ANTISENSE	ENSG00000231304	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_3p24.3	HERV	HML3	prototype	chr3	20614383	20620490	-	noncoding	SGO1-AS1	lncRNA	ANTISENSE	ENSG00000231304	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3p24.3f	HERV	HERVL	opposite*	chr3	20871639	20877490	-	noncoding	SGO1-AS1	lncRNA	ANTISENSE	ENSG00000231304	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_3p24.3c	HERV	MER4	prototype	chr3	20960401	20964089	+	noncoding	SGO1-AS1	lncRNA	SENSE	ENSG00000231304	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3p24.3b	HERV	HERVH	prototype	chr3	20967541	20973231	-	noncoding	SGO1-AS1	lncRNA	ANTISENSE	ENSG00000231304	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_3p24.3	HERV	MER4B	prototype	chr3	20986065	20995620	-	noncoding	SGO1-AS1	lncRNA	ANTISENSE	ENSG00000231304	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3p24.3c	HERV	HERVH	prototype	chr3	21189020	21194203	-	noncoding	AC099753.1	lncRNA	SENSE	ENSG00000282987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3p24.3d	HERV	HERVH	prototype	chr3	21377907	21382955	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VENTXP7	ENSG00000236380	22782	AC099753.1	ENSG00000282987	151602	None	None
MER61_3p24.3	HERV	MER61	prototype	chr3	21542639	21548245	+	noncoding	ZNF385D,ZNF385D-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000151789,ENSG00000225542	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:21542738-21542751,chr3:21542752-21542768,chr3:21542782-21542796,chr3:21542827-21542839
HERVL_3p24.3d	HERV	HERVL	prototype	chr3	22023929	22030341	+	coding	ZNF385D	protein_coding	ANTISENSE	ENSG00000151789	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p24.3d	HERV	ERVLE	internal	chr3	22090280	22091726	+	noncoding	ZNF385D	protein_coding	ANTISENSE	ENSG00000151789	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3p24.3e	HERV	HERVL	prototype	chr3	22516230	22518002	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB1P5	ENSG00000132967	133301	AC092421.1	ENSG00000234723	152199	None	None
ERVLE_3p24.3e	HERV	ERVLE	internal	chr3	23443952	23445979	-	noncoding	UBE2E2	protein_coding	ANTISENSE	ENSG00000182247	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p24.3f	HERV	ERVLE	internal	chr3	23446033	23446982	-	noncoding	UBE2E2	protein_coding	ANTISENSE	ENSG00000182247	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3p24.2	HERV	ERVLB4	oneside	chr3	24063621	24067835	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00691	ENSG00000224074	28434	NR1D2	ENSG00000174738	83004	None	None
ERVLE_3p24.2a	HERV	ERVLE	internal	chr3	24676396	24677387	+	noncoding	THRB-AS1	lncRNA	SENSE	ENSG00000228791	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p24.2b	HERV	ERVLE	internal	chr3	25698820	25699426	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NGLY1	ENSG00000151092	19518	CRIP1P2	ENSG00000238225	11697	None	None
ERV316A3_3p24.2	HERV	ERV316A3	oneside	chr3	25798176	25800254	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00692	ENSG00000230891	58271	OXSM	ENSG00000151093	3642	None	None
MER34B_3p24.2	HERV	MER34B	internal	chr3	25861541	25863258	+	noncoding	LINC00692	lncRNA	ANTISENSE	ENSG00000230891	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p24.2c	HERV	ERVLE	internal	chr3	25986027	25988001	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPEP2	ENSG00000234158	27668	LINC00692	ENSG00000230891	112279	None	None
HERVH_3p24.2	HERV	HERVH	prototype	chr3	26157652	26165575	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P12	ENSG00000237603	50747	RPEP2	ENSG00000234158	141283	None	None
ERVLE_3p24.1a	HERV	ERVLE	internal	chr3	26348577	26349817	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VENTXP4	ENSG00000230465	939	AC099754.1	ENSG00000225386	264444	None	None
ERVLE_3p24.1b	HERV	ERVLE	internal	chr3	26406373	26406986	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099754.1	ENSG00000225386	207275	VENTXP4	ENSG00000230465	58735	None	None
ERVLB4_3p24.1a	HERV	ERVLB4	oneside	chr3	26501345	26503831	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VENTXP4	ENSG00000230465	153707	AC099754.1	ENSG00000225386	110430	None	None
MER61_3p24.1a	HERV	MER61	internal	chr3	26820869	26825017	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LRRC3B	ENSG00000179796	103332	NEK10	ENSG00000163491	285068	None	None
HERVW_3p24.1	HERV	HERVW	oneside	chr3	27001024	27006410	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LRRC3B	ENSG00000179796	283487	NEK10	ENSG00000163491	103675	None	None
ERVLE_3p24.1c	HERV	ERVLE	internal	chr3	27138754	27140686	+	noncoding	NEK10	protein_coding	ANTISENSE	ENSG00000163491	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3p24.1a	HERV	HERVH	prototype	chr3	27549582	27553803	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC098614.1	ENSG00000223968	70399	AC137675.2	ENSG00000238912	1724	None	None
HERVH_3p24.1b	HERV	HERVH	prototype	chr3	27599002	27603163	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC137675.2	ENSG00000238912	51144	AC098614.1	ENSG00000223968	21039	None	None
ERV316A3_3p24.1	HERV	ERV316A3	oneside	chr3	28110979	28112641	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CMC1	ENSG00000187118	128943	LINC01967	ENSG00000235493	51711	None	None
ERVLB4_3p24.1b	HERV	ERVLB4	prototype	chr3	28387910	28390070	-	noncoding	ZCWPW2,AC098650.1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000206559,ENSG00000283563	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3p24.1	HERV	HERVL	prototype	chr3	28438982	28445253	-	noncoding	ZCWPW2,AC098650.1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000206559,ENSG00000283563	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3p24.1c	HERV	ERVLB4	oneside	chr3	28538837	28545324	+	noncoding	AC098650.1	protein_coding	SENSE	ENSG00000283563	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3p24.1d	HERV	ERVLB4	oneside	chr3	28627171	28628957	+	noncoding	AC098650.1,RBMS3	protein_coding,protein_coding	SENSE,SENSE	ENSG00000283563,ENSG00000144642	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_3p24.1	HERV	HUERSP2	prototype	chr3	28808210	28811250	-	noncoding	AC098650.1,RBMS3	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000283563,ENSG00000144642	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p24.1d	HERV	ERVLE	internal	chr3	28900238	28904008	-	coding	AC098650.1,RBMS3	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000283563,ENSG00000144642	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p24.1e	HERV	ERVLE	internal	chr3	29215164	29218038	-	noncoding	AC098650.1,RBMS3,RBMS3-AS3	protein_coding,protein_coding,lncRNA	ANTISENSE,ANTISENSE,SENSE	ENSG00000283563,ENSG00000144642,ENSG00000235904	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_3p24.1b	HERV	MER61	internal	chr3	30091851	30092571	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025614.3	ENSG00000287774	199977	RBMS3	ENSG00000144642	81460	None	None
MER41_3p24.1	HERV	MER41	prototype	chr3	30274612	30281091	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBMS3	ENSG00000144642	264221	AC025614.3	ENSG00000287774	11457	None	None
MER61_3p23	HERV	MER61	prototype	chr3	31042678	31047749	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GADL1	ENSG00000144644	147913	MIR466	ENSG00000265376	113955	None	None
ERVLE_3p23	HERV	ERVLE	internal	chr3	31368918	31370095	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	H3P11	ENSG00000230111	99512	THRAP3P1	ENSG00000227339	82737	None	None
MER41_3p22.3a	HERV	MER41	prototype	chr3	32048690	32057354	+	noncoding	OSBPL10	protein_coding	ANTISENSE	ENSG00000144645	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3p22.3a	HERV	HERVH	prototype	chr3	32067467	32076087	+	noncoding	OSBPL10	protein_coding	ANTISENSE	ENSG00000144645	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:32074319-32074329
HML6_3p22.3	HERV	HML6	prototype	chr3	32086707	32089604	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GPD1L	ENSG00000152642	16085	OSBPL10	ENSG00000144645	9127	None	None
HERVL_3p22.3a	HERV	HERVL	oneside	chr3	32207768	32209130	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097639.1	ENSG00000261572	27558	RPSAP11	ENSG00000237433	16141	None	None
HERVH_3p22.3b	HERV	HERVH	prototype	chr3	32460939	32466915	-	noncoding	CMTM7	protein_coding	ANTISENSE	ENSG00000153551	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:32462960-32462979
ERVLB4_3p22.3a	HERV	ERVLB4	internal	chr3	33081521	33082771	+	noncoding	GLB1	protein_coding	ANTISENSE	ENSG00000170266	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p22.3a	HERV	ERVLE	internal	chr3	33222864	33224908	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FBXL2	ENSG00000153558	52117	SUSD5	ENSG00000173705	4054	None	None
MER41_3p22.3b	HERV	MER41	internal	chr3	33458693	33461755	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP128	ENSG00000202175	30228	UBP1	ENSG00000153560	17322	None	None
MER61_3p22.3a	HERV	MER61	internal	chr3	33464819	33466622	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP128	ENSG00000202175	25361	UBP1	ENSG00000153560	23448	None	None
MER101_3p22.3	HERV	MER101	oneside	chr3	33472376	33476864	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP128	ENSG00000202175	15119	UBP1	ENSG00000153560	31005	None	None
ERVLE_3p22.3b	HERV	ERVLE	internal	chr3	34583594	34587014	-	noncoding	LINC01811	lncRNA	ANTISENSE	ENSG00000226320	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3p22.3c	HERV	HERVH	oneside	chr3	34640456	34642481	-	noncoding	LINC01811	lncRNA	ANTISENSE	ENSG00000226320	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3p22.3b	HERV	ERVLB4	internal	chr3	34910326	34913972	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P18	ENSG00000228767	301733	FECHP1	ENSG00000235534	36472	None	None
ERVLE_3p22.3c	HERV	ERVLE	internal	chr3	35041843	35043042	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P18	ENSG00000228767	172663	FECHP1	ENSG00000235534	167989	None	None
HERVL_3p22.3b	HERV	HERVL	internal	chr3	35043080	35044731	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P18	ENSG00000228767	170974	FECHP1	ENSG00000235534	169226	None	None
ERVL_3p22.3	HERV	ERVL	prototype	chr3	35083187	35085422	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P18	ENSG00000228767	130283	FECHP1	ENSG00000235534	209333	None	None
HERVL_3p22.3c	HERV	HERVL	prototype	chr3	35141404	35143062	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P18	ENSG00000228767	72643	FECHP1	ENSG00000235534	267550	None	None
MER61_3p22.3b	HERV	MER61	oneside	chr3	35544835	35547203	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARPP21	ENSG00000172995	91742	RNU6-243P	ENSG00000212442	287889	None	None
ERV316A3_3p22.3a	HERV	ERV316A3	internal	chr3	35807616	35809676	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104308.1	ENSG00000226489	62190	ARPP21	ENSG00000172995	13120	None	None
HERVH_3p22.3d	HERV	HERVH	prototype	chr3	35874404	35880025	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RFC3P1	ENSG00000236158	289742	AC104308.1	ENSG00000226489	2206	None	None
ERVLE_3p22.3d	HERV	ERVLE	internal	chr3	35891137	35892785	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104308.1	ENSG00000226489	18939	RFC3P1	ENSG00000236158	276982	None	None
ERVLE_3p22.3e	HERV	ERVLE	internal	chr3	36012327	36013319	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104308.1	ENSG00000226489	140129	RFC3P1	ENSG00000236158	156448	None	None
ERV316A3_3p22.3b	HERV	ERV316A3	oneside	chr3	36172450	36173324	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STAC	ENSG00000144681	207020	RFC3P1	ENSG00000236158	2002	None	None
ERVLE_3p22.3f	HERV	ERVLE	internal	chr3	36327449	36328608	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STAC	ENSG00000144681	51736	RFC3P1	ENSG00000236158	157001	None	None
MER4B_3p22.3	HERV	MER4B	internal	chr3	36362755	36369039	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RFC3P1	ENSG00000236158	192307	STAC	ENSG00000144681	11305	None	None
HERVH_3p22.2a	HERV	HERVH	prototype	chr3	37205260	37209862	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097359.1	ENSG00000231449	8594	AC097359.3	ENSG00000271653	6917	None	None
HERVH_3p22.2b	HERV	HERVH	tandem*	chr3	38070496	38083728	-	noncoding	DLEC1	protein_coding	ANTISENSE	ENSG00000008226	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_3p22.2	HERV	HERVW	prototype	chr3	38289418	38297325	-	noncoding	SLC22A14	protein_coding	ANTISENSE	ENSG00000144671	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_3p22.2	HERV	HML3	prototype	chr3	38420760	38427256	+	noncoding	XYLB	protein_coding	SENSE	ENSG00000093217	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p22.2a	HERV	ERVLE	internal	chr3	38669189	38670178	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SCN10A	ENSG00000185313	26624	SCN5A	ENSG00000183873	19502	None	None
ERVLE_3p22.2b	HERV	ERVLE	internal	chr3	39013937	39015565	-	noncoding	SCN11A	protein_coding	SENSE	ENSG00000168356	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p22.2c	HERV	ERVLE	internal	chr3	39049134	39050019	-	noncoding	SCN11A	protein_coding	SENSE	ENSG00000168356	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3p22.1a	HERV	HERVH	prototype	chr3	39577832	39583618	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NFU1P1	ENSG00000230757	60020	MOBP	ENSG00000168314	48353	None	None
HERVW_3p22.1	HERV	HERVW	oneside	chr3	39658378	39660074	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NFU1P1	ENSG00000230757	13673	MYRIP	ENSG00000170011	148840	None	None
ERVLE_3p22.1a	HERV	ERVLE	internal	chr3	39670157	39670791	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MYRIP	ENSG00000170011	138123	NFU1P1	ENSG00000230757	25452	None	None
ERVLE_3p22.1b	HERV	ERVLE	internal	chr3	39843529	39845079	-	noncoding	MYRIP	protein_coding	ANTISENSE	ENSG00000170011	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_3p22.1a	HERV	MER101	internal	chr3	40264428	40265037	+	noncoding	EIF1B-AS1	lncRNA	ANTISENSE	ENSG00000280739	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_3p22.1a	HERV	MER41	prototype	chr3	40343324	40352457	+	noncoding	ENTPD3-AS1	lncRNA	ANTISENSE	ENSG00000223797	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_3p22.1b	HERV	MER41	internal	chr3	40552408	40556384	-	noncoding	ZNF621	protein_coding	ANTISENSE	ENSG00000172888	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3p22.1b	HERV	HERVH	prototype	chr3	40560896	40566678	+	noncoding	ZNF621	protein_coding	SENSE	ENSG00000172888	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3p22.1a	HERV	ERVLB4	internal	chr3	41737789	41739828	+	noncoding	ULK4	protein_coding	ANTISENSE	ENSG00000168038	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p22.1c	HERV	ERVLE	internal	chr3	41984938	41986921	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GEMIN2P2	ENSG00000235339	6904	TRAK1	ENSG00000182606	26881	None	None
MER101_3p22.1b	HERV	MER101	internal	chr3	42310574	42311458	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SALL4P6	ENSG00000231280	9547	AC018358.1	ENSG00000281160	44184	None	None
MER101_3p22.1c	HERV	MER101	internal	chr3	42311794	42315063	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SALL4P6	ENSG00000231280	5942	AC018358.1	ENSG00000281160	45404	None	None
ERVLB4_3p22.1b	HERV	ERVLB4	internal	chr3	42389508	42390732	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EIF4BP4	ENSG00000229572	47141	LYZL4	ENSG00000157093	6351	None	None
ERVLE_3p22.1d	HERV	ERVLE	internal	chr3	42680198	42680875	-	noncoding	AC006059.5	lncRNA	SENSE	ENSG00000287629	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_3p22.1c	HERV	MER41	prototype	chr3	42718040	42722791	+	noncoding	AC006059.3,CCDC13,AC006059.2,AC006059.4	lncRNA,protein_coding,protein_coding,lncRNA	ANTISENSE,ANTISENSE,ANTISENSE,SENSE	ENSG00000285539,ENSG00000244607,ENSG00000280571,ENSG00000287417	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PABLA_3p22.1	HERV	PABLA	internal	chr3	42719437	42721839	+	noncoding	AC006059.3,CCDC13,AC006059.2,AC006059.4	lncRNA,protein_coding,protein_coding,lncRNA	ANTISENSE,ANTISENSE,ANTISENSE,SENSE	ENSG00000285539,ENSG00000244607,ENSG00000280571,ENSG00000287417	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_3p22.1	HERV	HERVFRD	oneside	chr3	42896033	42900433	+	noncoding	AC099329.2,AC092042.3,KRBOX1	lncRNA,protein_coding,protein_coding	SENSE,SENSE,SENSE	ENSG00000273328,ENSG00000273291,ENSG00000240747	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
LTR25_3p22.1	HERV	LTR25	internal	chr3	42918608	42924975	-	noncoding	AC092042.3,KRBOX1,ZNF662	protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000273291,ENSG00000240747,ENSG00000182983	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
MER61_3p22.1	HERV	MER61	internal	chr3	42924026	42924859	-	noncoding	AC092042.3,KRBOX1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000273291,ENSG00000240747	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p22.1e	HERV	ERVLE	internal	chr3	43145607	43146425	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POMGNT2	ENSG00000144647	39528	SNRK	ENSG00000163788	140087	None	None
HERVH_3p21.31a	HERV	HERVH	unknown	chr3	44344658	44351310	-	noncoding	TCAIM	protein_coding	ANTISENSE	ENSG00000179152	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3p21.31a	HERV	ERVLB4	internal	chr3	44434466	44439444	-	noncoding	C3orf86,ZNF445	transcribed_unitary_pseudogene,protein_coding	SENSE,SENSE	ENSG00000225873,ENSG00000185219	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_3p21.31	HERV	HUERSP1	prototype	chr3	44460179	44468961	+	coding	ZNF445	protein_coding	ANTISENSE	ENSG00000185219	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_3p21.31	HERV	HERV9	prototype	chr3	44543585	44550965	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZKSCAN7	ENSG00000196345	4228	AC099669.1	ENSG00000277509	14194	None	None
MER61_3p21.31	HERV	MER61	prototype	chr3	44768308	44774152	-	noncoding	KIF15	protein_coding	ANTISENSE	ENSG00000163808	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3p21.31b	HERV	HERVH	oneside	chr3	44855024	44859382	-	noncoding	KIF15	protein_coding	ANTISENSE	ENSG00000163808	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p21.31a	HERV	ERVLE	internal	chr3	45014519	45016480	+	noncoding	EXOSC7,CLEC3B	protein_coding,protein_coding	SENSE,SENSE	ENSG00000075914,ENSG00000163815	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3p21.31a	HERV	ERV316A3	internal	chr3	45172295	45175673	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM158	ENSG00000249992	48793	RPS24P8	ENSG00000224094	12120	None	None
ERV316A3_3p21.31b	HERV	ERV316A3	internal	chr3	45189267	45190484	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM158	ENSG00000249992	33982	RPS24P8	ENSG00000224094	29092	None	None
ERVLE_3p21.31b	HERV	ERVLE	internal	chr3	45274830	45276248	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LARS2	ENSG00000011376	112313	AC010170.1	ENSG00000202268	19210	None	None
ERVLE_3p21.31c	HERV	ERVLE	internal	chr3	45282981	45287440	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LARS2	ENSG00000011376	101121	AC010170.1	ENSG00000202268	27361	None	None
ERV316A3_3p21.31c	HERV	ERV316A3	prototype	chr3	45818665	45822568	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC6A20	ENSG00000163817	22129	LZTFL1	ENSG00000163818	748	None	None
HERVFRD_3p21.31	HERV	HERVFRD	prototype	chr3	46000357	46006717	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FYCO1	ENSG00000163820	4533	XCR1	ENSG00000173578	10307	chr3:46006712-46007017	None
HML6_3p21.31a	HERV	HML6	prototype	chr3	46046154	46054474	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FLT1P1	ENSG00000229515	87884	XCR1	ENSG00000173578	18412	None	None
ERVLB4_3p21.31b	HERV	ERVLB4	oneside	chr3	46057514	46059437	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	XCR1	ENSG00000173578	29772	FLT1P1	ENSG00000229515	82921	None	None
ERVLB4_3p21.31c	HERV	ERVLB4	internal	chr3	46059855	46061543	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FLT1P1	ENSG00000229515	80815	XCR1	ENSG00000173578	32113	None	None
HERVP71A_3p21.31	HERV	HERVP71A	prototype	chr3	46111061	46118672	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FLT1P1	ENSG00000229515	23686	XCR1	ENSG00000173578	83319	chr3:46111149-46111590,chr3:46112357-46112585	chr3:46111325-46111333,chr3:46111391-46111401,chr3:46111423-46111444,chr3:46111167-46111182
HERVH_3p21.31c	HERV	HERVH	prototype	chr3	46246275	46252065	-	noncoding	CCR3	protein_coding	ANTISENSE	ENSG00000183625	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p21.31d	HERV	ERVLE	internal	chr3	46280238	46282236	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCR3	ENSG00000183625	13532	UQCRC2P1	ENSG00000236736	28355	None	None
ERVLE_3p21.31e	HERV	ERVLE	internal	chr3	46282260	46283076	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UQCRC2P1	ENSG00000236736	27515	CCR3	ENSG00000183625	15554	None	None
HERVH_3p21.31d	HERV	HERVH	prototype	chr3	46326736	46332857	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCR2	ENSG00000121807	20877	UQCRC2P1	ENSG00000236736	14814	None	None
HML5_3p21.31	HERV	HML5	internal	chr3	46333397	46335997	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UQCRC2P1	ENSG00000236736	21475	CCR2	ENSG00000121807	17737	None	None
HERVH_3p21.31e	HERV	HERVH	prototype	chr3	46387685	46393402	-	noncoding	CCR5AS	lncRNA	SENSE	ENSG00000223552	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr3:46388923-46389096	None
ERVLB4_3p21.31d	HERV	ERVLB4	internal	chr3	46414268	46416315	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCRL2	ENSG00000121797	1271	LINC02009	ENSG00000283646	209	None	None
HERVL18_3p21.31a	HERV	HERVL18	oneside	chr3	46417556	46419247	-	noncoding	LINC02009	lncRNA	SENSE	ENSG00000283646	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL18_3p21.31b	HERV	HERVL18	oneside	chr3	46419310	46423900	-	coding	LINC02009	lncRNA	SENSE	ENSG00000283646	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr3:46420887-46420948	chr3:46423626-46423645,chr3:46423661-46423672,chr3:46423588-46423598
HML6_3p21.31b	HERV	HML6	prototype	chr3	46426543	46433630	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02009	ENSG00000283646	2952	LTF	ENSG00000012223	2015	None	chr3:46426843-46426848
HERVL40_3p21.31	HERV	HERVL40	oneside	chr3	46631054	46632393	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104304.3	ENSG00000286570	14778	FAM240A	ENSG00000283473	4511	None	None
ERV316A3_3p21.31d	HERV	ERV316A3	oneside	chr3	46637487	46642758	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104304.3	ENSG00000286570	4413	FAM240A	ENSG00000283473	10944	None	None
HERVL_3p21.31a	HERV	HERVL	oneside	chr3	46813334	46816554	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PRSS42P	ENSG00000178055	12988	AC109583.1	ENSG00000206549	760	None	None
ERV316A3_3p21.31e	HERV	ERV316A3	internal	chr3	46816558	46817200	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC109583.1	ENSG00000206549	3984	PRSS42P	ENSG00000178055	12342	None	None
ERVLE_3p21.31f	HERV	ERVLE	internal	chr3	46834473	46837458	-	noncoding	MYL3	protein_coding	SENSE	ENSG00000160808	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
MER101_3p21.31	HERV	MER101	internal	chr3	47201791	47205359	+	noncoding	KIF9-AS1	lncRNA	SENSE	ENSG00000227398	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p21.31g	HERV	ERVLE	internal	chr3	47953560	47958499	+	noncoding	MAP4	protein_coding	ANTISENSE	ENSG00000047849	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3p21.31b	HERV	HERVL	prototype	chr3	48003689	48011040	+	noncoding	MAP4	protein_coding	ANTISENSE	ENSG00000047849	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_3p21.31	HERV	HERVIP10F	prototype	chr3	48272779	48278831	+	noncoding	ZNF589	protein_coding	SENSE	ENSG00000164048	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_3p21.31	HERV	HERVW	oneside	chr3	48330526	48333802	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FBXW12	ENSG00000164049	38417	SPINK8	ENSG00000229453	2185	None	None
HERVIP10FH_3p21.31	HERV	HERVIP10FH	internal	chr3	48333982	48335714	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FBXW12	ENSG00000164049	36505	SPINK8	ENSG00000229453	5641	None	None
ERVLB4_3p21.31e	HERV	ERVLB4	internal	chr3	48509940	48513119	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SHISA5	ENSG00000164054	5114	PFKFB4	ENSG00000114268	4565	None	None
HERVH_3p21.31f	HERV	HERVH	oneside	chr3	48723255	48730147	-	noncoding	IP6K2	protein_coding	SENSE	ENSG00000068745	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_3p21.31a	HERV	HML3	oneside	chr3	49219140	49220344	+	noncoding	CCDC36	protein_coding	SENSE	ENSG00000173421	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_3p21.31b	HERV	HML3	oneside	chr3	49229259	49234078	+	noncoding	CCDC36	protein_coding	SENSE	ENSG00000173421	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH19_3p21.31	HERV	HERVFH19	internal	chr3	49541243	49544247	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DAG1	ENSG00000173402	5625	BSN-DT	ENSG00000226913	5059	None	None
MER4_3p21.31a	HERV	MER4	oneside	chr3	50305833	50309182	+	noncoding	HYAL1	protein_coding	ANTISENSE	ENSG00000114378	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_3p21.31b	HERV	MER4	internal	chr3	50309485	50310263	+	noncoding	HYAL1	protein_coding	ANTISENSE	ENSG00000114378	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_3p21.2	HERV	MER41	oneside	chr3	50832523	50835408	-	noncoding	DOCK3	protein_coding	ANTISENSE	ENSG00000088538	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p21.2	HERV	ERVLE	internal	chr3	50923601	50924796	-	noncoding	DOCK3	protein_coding	ANTISENSE	ENSG00000088538	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3p21.2	HERV	HERVL	opposite*	chr3	51126962	51133823	-	noncoding	DOCK3	protein_coding	ANTISENSE	ENSG00000088538	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH48_3p21.2	HERV	HERVH48	oneside	chr3	51531829	51534108	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RAD54L2	ENSG00000164080	7036	DCAF1	ENSG00000145041	31827	None	None
HERVI_3p21.2	HERV	HERVI	internal	chr3	51737952	51742260	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRM2	ENSG00000164082	19339	IQCF6	ENSG00000214686	36301	None	None
HERV9_3p21.2	HERV	HERV9	oneside	chr3	51742261	51747980	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRM2	ENSG00000164082	23648	IQCF6	ENSG00000214686	30581	None	None
MER4B_3p21.2a	HERV	MER4B	internal	chr3	51747970	51751871	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IQCF6	ENSG00000214686	26690	GRM2	ENSG00000164082	29357	None	None
ERVLB4_3p21.2	HERV	ERVLB4	internal	chr3	51837382	51838627	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IQCF2	ENSG00000184345	22988	AC097636.2	ENSG00000285749	3993	None	None
ERV316A3_3p21.2a	HERV	ERV316A3	internal	chr3	51838684	51841803	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097636.2	ENSG00000285749	5295	IQCF2	ENSG00000184345	19812	None	None
MER61_3p21.2	HERV	MER61	oneside	chr3	51841775	51846337	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IQCF2	ENSG00000184345	15278	AC097636.2	ENSG00000285749	8386	None	None
ERV316A3_3p21.2b	HERV	ERV316A3	internal	chr3	51880777	51881408	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IQCF1	ENSG00000173389	13468	IQCF5-AS1	ENSG00000235455	5010	None	None
HERVIP10FH_3p21.2	HERV	HERVIP10FH	prototype	chr3	51896962	51902910	+	noncoding	IQCF1	protein_coding	ANTISENSE	ENSG00000173389	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
MER4_3p21.2	HERV	MER4	prototype	chr3	52155574	52167033	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POC1A	ENSG00000164087	884	AC097637.3	ENSG00000286419	16689	None	None
MER4B_3p21.2b	HERV	MER4B	oneside	chr3	52167646	52169660	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POC1A	ENSG00000164087	12956	AC097637.3	ENSG00000286419	14062	None	None
ERV316A3_3p21.1a	HERV	ERV316A3	oneside	chr3	53417669	53421099	-	noncoding	CACNA1D	protein_coding	ANTISENSE	ENSG00000157388	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3p21.1b	HERV	ERV316A3	prototype	chr3	53424460	53428060	-	noncoding	CACNA1D	protein_coding	ANTISENSE	ENSG00000157388	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3p21.1c	HERV	ERV316A3	internal	chr3	53452647	53455296	-	noncoding	CACNA1D	protein_coding	ANTISENSE	ENSG00000157388	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p21.1	HERV	ERVLE	internal	chr3	53614763	53615857	-	noncoding	CACNA1D	protein_coding	ANTISENSE	ENSG00000157388	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3p14.3a	HERV	HERVH	prototype	chr3	54634484	54640204	-	noncoding	CACNA2D3,ESRG	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000157445,ENSG00000265992	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:54638933-54638955,chr3:54639159-54639164
MER41_3p14.3a	HERV	MER41	prototype	chr3	54977737	54983085	-	noncoding	CACNA2D3	protein_coding	ANTISENSE	ENSG00000157445	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:54982669-54982688,chr3:54982694-54982705
HERVL_3p14.3	HERV	HERVL	oneside	chr3	55260344	55264254	+	noncoding	LINC02030	lncRNA	SENSE	ENSG00000240708	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p14.3a	HERV	ERVLE	internal	chr3	55799081	55799888	+	noncoding	ERC2	protein_coding	ANTISENSE	ENSG00000187672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p14.3b	HERV	ERVLE	internal	chr3	57178398	57179278	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IL17RD	ENSG00000144730	8092	HESX1	ENSG00000163666	18560	None	None
HERVH_3p14.3b	HERV	HERVH	oneside	chr3	57303802	57309115	+	noncoding	DNAH12	protein_coding	ANTISENSE	ENSG00000174844	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_3p14.3b	HERV	MER41	prototype	chr3	58436193	58439854	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC116036.2	ENSG00000272360	50976	PDHB	ENSG00000168291	2336	None	None
HERVH_3p14.3c	HERV	HERVH	oneside	chr3	58592371	58595704	+	noncoding	FAM107A	protein_coding	ANTISENSE	ENSG00000168309	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_3p14.2	HERV	MER4B	internal	chr3	58691923	58694570	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C3orf67	ENSG00000163689	22795	FAM3D	ENSG00000198643	25089	None	None
ERVLB4_3p14.2	HERV	ERVLB4	oneside	chr3	58713101	58717281	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C3orf67	ENSG00000163689	84	FAM3D	ENSG00000198643	46267	None	None
ERVLE_3p14.2a	HERV	ERVLE	internal	chr3	60767746	60770164	+	noncoding	FHIT	protein_coding	ANTISENSE	ENSG00000189283	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_3p14.2	HERV	MER61	prototype	chr3	60775299	60781077	+	noncoding	FHIT	protein_coding	ANTISENSE	ENSG00000189283	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:60775434-60775446,chr3:60775448-60775461
ERVLE_3p14.2b	HERV	ERVLE	internal	chr3	62693920	62695295	+	noncoding	CADPS	protein_coding	ANTISENSE	ENSG00000163618	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3p14.2	HERV	ERV316A3	oneside	chr3	63224768	63225603	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SYNPR	ENSG00000163630	2712	UBL5P3	ENSG00000240359	21320	None	None
HERVH_3p14.2	HERV	HERVH	internal	chr3	63583912	63584645	-	coding	SYNPR	protein_coding	ANTISENSE	ENSG00000163630	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_3p14.1	HERV	MER34B	internal	chr3	63845056	63847820	+	noncoding	C3orf49,THOC7	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000163632,ENSG00000163634	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3p14.1	HERV	ERVLB4	oneside	chr3	65214795	65216849	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02040	ENSG00000243149	21286	MAGI1	ENSG00000151276	136676	None	None
HERVH_3p14.1	HERV	HERVH	prototype	chr3	67037862	67044184	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4272	ENSG00000283298	181280	KBTBD8	ENSG00000163376	26652	None	chr3:67043767-67043795
HERVL32_3p14.1	HERV	HERVL32	prototype	chr3	67228015	67232424	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114401.1	ENSG00000241884	63876	MIR4272	ENSG00000283298	2488	None	None
HERVL_3p14.1a	HERV	HERVL	prototype	chr3	67833950	67838437	+	coding	SUCLG2-AS1	lncRNA	SENSE	ENSG00000241316	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3p14.1b	HERV	HERVL	opposite*	chr3	68439359	68442002	+	noncoding	TAFA1	protein_coding	SENSE	ENSG00000183662	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3p13a	HERV	HERVL	prototype	chr3	69976601	69983100	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MITF	ENSG00000187098	8264	SAMMSON	ENSG00000240405	16450	None	None
MER101_3p13	HERV	MER101	internal	chr3	70158554	70159177	-	noncoding	SAMMSON	lncRNA	ANTISENSE	ENSG00000240405	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3p13a	HERV	HERVH	prototype	chr3	70434672	70440419	-	noncoding	SAMMSON	lncRNA	ANTISENSE	ENSG00000240405	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_3p13	HERV	ERVL	oneside	chr3	70637953	70641157	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	COX6CP6	ENSG00000240156	109966	AC104633.2	ENSG00000287669	17628	None	None
HERVL_3p13b	HERV	HERVL	oneside	chr3	71979900	71983185	-	noncoding	LINC00877	lncRNA	SENSE	ENSG00000241163	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:71982536-71982939	chr3:71982907-71982920,chr3:71982928-71982939
HERVH_3p13b	HERV	HERVH	prototype	chr3	72023126	72028900	+	noncoding	LINC00877	lncRNA	ANTISENSE	ENSG00000241163	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3p12.3a	HERV	ERV316A3	internal	chr3	74548876	74551293	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CNTN3	ENSG00000113805	27736	NIPA2P2	ENSG00000241022	532862	None	None
ERV316A3_3p12.3b	HERV	ERV316A3	oneside	chr3	74557375	74558370	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CNTN3	ENSG00000113805	36235	NIPA2P2	ENSG00000241022	525785	None	None
HARLEQUIN_3p12.3	HERV	HARLEQUIN	prototype	chr3	74825023	74831316	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CNTN3	ENSG00000113805	303883	NIPA2P2	ENSG00000241022	252839	None	None
HERVW_3p12.3a	HERV	HERVW	oneside	chr3	74872833	74874453	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NIPA2P2	ENSG00000241022	209702	CNTN3	ENSG00000113805	351693	None	None
HERVW_3p12.3b	HERV	HERVW	oneside	chr3	74874536	74878086	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NIPA2P2	ENSG00000241022	206069	CNTN3	ENSG00000113805	353396	None	None
HERV4_3p12.3	HERV	HERV4	oneside	chr3	75117732	75119274	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NIPA2P2	ENSG00000241022	32495	RN7SL294P	ENSG00000242638	63480	None	None
HERVE_3p12.3a	HERV	HERVE	prototype	chr3	75136182	75144865	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NIPA2P2	ENSG00000241022	50945	RN7SL294P	ENSG00000242638	37889	None	None
MER61_3p12.3a	HERV	MER61	oneside	chr3	75208660	75209517	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL294P	ENSG00000242638	25612	MIR4444-2	ENSG00000266780	4959	None	None
HERVE_3p12.3b	HERV	HERVE	internal	chr3	75361875	75365929	-	coding	OR7E22P	transcribed_unprocessed_pseudogene	SENSE	ENSG00000179799	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_3p12.3a	HERV	HERVH	prototype	chr3	75469906	75475683	-	noncoding	LINC02018,ENPP7P2	lncRNA,unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000272690,ENSG00000239959	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVS71_3p12.3	HERV	HERVS71	prototype	chr3	75500237	75507467	-	coding	LINC02018	lncRNA	ANTISENSE	ENSG00000272690	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_3p12.3	HERV	HML2	prototype	chr3	75551314	75559999	+	coding	AC133041.1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000272710	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3p12.3a	HERV	ERVLB4	internal	chr3	75581982	75582578	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC133041.1	ENSG00000272710	1783	AC108724.1	ENSG00000239383	7720	None	None
HERVE_3p12.3c	HERV	HERVE	internal	chr3	75604058	75608125	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UNC93B3	ENSG00000172971	11381	OR7E121P	ENSG00000244222	4385	None	chr3:75606636-75606651
PRIMA41_3p12.3	HERV	PRIMA41	internal	chr3	75705270	75707459	+	noncoding	LINC00960,ZNF717	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000242516,ENSG00000227124	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_3p12.3	HERV	MER101	oneside	chr3	75709487	75712912	-	noncoding	LINC00960,ZNF717	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000242516,ENSG00000227124	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_3p12.3	HERV	HML3	oneside	chr3	75806221	75810138	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ROBO2	ENSG00000185008	96557	ZNF717	ENSG00000227124	20638	None	None
HML1_3p12.3	HERV	HML1	oneside	chr3	75810139	75812281	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ROBO2	ENSG00000185008	94414	ZNF717	ENSG00000227124	24556	None	None
ERVLB4_3p12.3b	HERV	ERVLB4	oneside	chr3	76220715	76224660	-	noncoding	ROBO2	protein_coding	ANTISENSE	ENSG00000185008	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3p12.3b	HERV	HERVH	oneside	chr3	76534692	76538146	-	noncoding	ROBO2	protein_coding	ANTISENSE	ENSG00000185008	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3p12.3c	HERV	ERV316A3	internal	chr3	77670360	77671460	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ROBO2	ENSG00000185008	20396	RNU6-217P	ENSG00000206891	140281	None	None
ERV316A3_3p12.3d	HERV	ERV316A3	oneside	chr3	77671522	77673728	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ROBO2	ENSG00000185008	21558	RNU6-217P	ENSG00000206891	138013	None	None
HERVL_3p12.3	HERV	HERVL	prototype	chr3	77731061	77737070	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-217P	ENSG00000206891	74671	ROBO2	ENSG00000185008	81097	None	None
ERVLB4_3p12.3c	HERV	ERVLB4	internal	chr3	77889215	77890530	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-217P	ENSG00000206891	77371	LINC02077	ENSG00000244461	148175	None	None
HUERSP3_3p12.3	HERV	HUERSP3	internal	chr3	77919506	77923855	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-217P	ENSG00000206891	107662	LINC02077	ENSG00000244461	114850	None	None
MER4B_3p12.3	HERV	MER4B	internal	chr3	77993319	77994432	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-217P	ENSG00000206891	181475	LINC02077	ENSG00000244461	44273	None	None
ERVLB4_3p12.3d	HERV	ERVLB4	oneside	chr3	78196961	78198455	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108752.1	ENSG00000240241	68485	RN7SKP61	ENSG00000222574	34969	None	None
MER61_3p12.3b	HERV	MER61	prototype	chr3	78246303	78249765	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP61	ENSG00000222574	84311	AC108752.1	ENSG00000240241	17175	None	None
HERVL40_3p12.3	HERV	HERVL40	internal	chr3	78277098	78278421	-	noncoding	AC108752.1	lncRNA	ANTISENSE	ENSG00000240241	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3p12.3c	HERV	HERVH	oneside	chr3	78323654	78327784	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108752.1	ENSG00000240241	28923	MRPS17P3	ENSG00000239226	197317	None	None
ERVLB4_3p12.3e	HERV	ERVLB4	oneside	chr3	78358198	78360135	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPS17P3	ENSG00000239226	164966	AC108752.1	ENSG00000240241	63467	None	None
ERVLB4_3p12.3f	HERV	ERVLB4	oneside	chr3	78360180	78365915	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPS17P3	ENSG00000239226	159186	AC108752.1	ENSG00000240241	65449	None	None
HERVH_3p12.3d	HERV	HERVH	prototype	chr3	78581212	78588919	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ROBO1	ENSG00000169855	8320	MRPS17P3	ENSG00000239226	55727	None	None
HERVK11_3p12.3	HERV	HERVK11	prototype	chr3	79051663	79060592	+	noncoding	ROBO1	protein_coding	ANTISENSE	ENSG00000169855	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p12.3	HERV	ERVLE	internal	chr3	79111643	79116078	+	noncoding	ROBO1	protein_coding	ANTISENSE	ENSG00000169855	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3p12.3e	HERV	HERVH	prototype	chr3	79618310	79621442	+	noncoding	ROBO1	protein_coding	ANTISENSE	ENSG00000169855	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:79618621-79618637
ERV316A3_3p12.3e	HERV	ERV316A3	oneside	chr3	79659712	79661388	+	noncoding	ROBO1	protein_coding	ANTISENSE	ENSG00000169855	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVEA_3p12.3	HERV	HERVEA	prototype	chr3	79772862	79780980	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ROBO1	ENSG00000169855	4864	HMGB1P38	ENSG00000243877	176586	None	None
ERV316A3_3p12.2a	HERV	ERV316A3	oneside	chr3	79855742	79860633	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ROBO1	ENSG00000169855	87744	HMGB1P38	ENSG00000243877	96933	None	None
ERVL_3p12.2	HERV	ERVL	oneside	chr3	79978171	79980974	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OSBPL9P1	ENSG00000271389	182353	HMGB1P38	ENSG00000243877	20029	None	None
ERVLE_3p12.2a	HERV	ERVLE	internal	chr3	80077098	80077951	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB1P38	ENSG00000243877	118956	OSBPL9P1	ENSG00000271389	85376	None	None
ERVLE_3p12.2b	HERV	ERVLE	internal	chr3	80180559	80182759	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OSBPL9P1	ENSG00000271389	15764	HNRNPA3P8	ENSG00000239699	33502	None	None
MER34B_3p12.2a	HERV	MER34B	internal	chr3	80202165	80202838	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OSBPL9P1	ENSG00000271389	37370	HNRNPA3P8	ENSG00000239699	13423	None	None
MER34B_3p12.2b	HERV	MER34B	internal	chr3	80203195	80204672	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OSBPL9P1	ENSG00000271389	38400	HNRNPA3P8	ENSG00000239699	11589	None	None
HERV30_3p12.2	HERV	HERV30	prototype	chr3	80306978	80312729	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA3P8	ENSG00000239699	89744	AC108740.1	ENSG00000242586	129352	None	None
ERVLB4_3p12.2a	HERV	ERVLB4	oneside	chr3	80348682	80349858	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA3P8	ENSG00000239699	131448	AC108740.1	ENSG00000242586	92223	None	None
HERVH_3p12.2a	HERV	HERVH	oneside	chr3	80386128	80391440	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA3P8	ENSG00000239699	168894	AC108740.1	ENSG00000242586	50641	None	chr3:80391334-80391335
ERVLE_3p12.2c	HERV	ERVLE	internal	chr3	80399022	80401303	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA3P8	ENSG00000239699	181788	AC108740.1	ENSG00000242586	40778	None	None
ERVLE_3p12.2d	HERV	ERVLE	internal	chr3	80534873	80535884	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108740.1	ENSG00000242586	92568	AC108690.1	ENSG00000286329	66832	None	None
ERVLB4_3p12.2b	HERV	ERVLB4	oneside	chr3	80787498	80788979	+	noncoding	AC068756.1,LINC02050	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000242828,ENSG00000242781	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3p12.2b	HERV	ERV316A3	oneside	chr3	80825941	80828888	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02027	ENSG00000243694	164966	LINC02050	ENSG00000242781	36553	None	None
ERV316A3_3p12.2c	HERV	ERV316A3	internal	chr3	80831826	80835595	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02027	ENSG00000243694	158259	LINC02050	ENSG00000242781	42438	None	None
ERVLE_3p12.2e	HERV	ERVLE	internal	chr3	80885606	80887604	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02027	ENSG00000243694	106250	LINC02050	ENSG00000242781	96218	None	None
HERVL_3p12.2a	HERV	HERVL	internal	chr3	80898414	80900095	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02027	ENSG00000243694	93759	LINC02050	ENSG00000242781	109026	None	None
ERVLE_3p12.2f	HERV	ERVLE	internal	chr3	80937332	80939771	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02027	ENSG00000243694	54083	LINC02050	ENSG00000242781	147944	None	None
PRIMA41_3p12.2	HERV	PRIMA41	internal	chr3	81006107	81009643	-	noncoding	LINC02027	lncRNA	ANTISENSE	ENSG00000243694	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_3p12.2	HERV	LTR19	prototype	chr3	81065742	81070295	+	noncoding	LINC02027	lncRNA	SENSE	ENSG00000243694	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3p12.2d	HERV	ERV316A3	oneside	chr3	81231137	81235457	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099542.1	ENSG00000241593	11122	AC099542.2	ENSG00000242145	22223	None	chr3:81235179-81235181
MER41_3p12.2	HERV	MER41	prototype	chr3	81546380	81551026	+	noncoding	GBE1	protein_coding	ANTISENSE	ENSG00000114480	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p12.2g	HERV	ERVLE	internal	chr3	81728971	81730583	+	noncoding	GBE1	protein_coding	ANTISENSE	ENSG00000114480	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p12.2h	HERV	ERVLE	internal	chr3	81734506	81736552	-	noncoding	GBE1	protein_coding	SENSE	ENSG00000114480	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_3p12.2	HERV	MER61	prototype	chr3	81986021	81991673	+	noncoding	LINC02008	lncRNA	SENSE	ENSG00000239440	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:81986149-81986156,chr3:81986170-81986183,chr3:81991018-81991020
ERV316A3_3p12.2e	HERV	ERV316A3	internal	chr3	82035185	82035935	+	noncoding	LINC02008	lncRNA	SENSE	ENSG00000239440	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3p12.2f	HERV	ERV316A3	prototype	chr3	82122576	82128820	+	noncoding	LINC02008	lncRNA	SENSE	ENSG00000239440	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3p12.2g	HERV	ERV316A3	oneside	chr3	82516053	82519220	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYP51A1P1	ENSG00000241095	287295	LINC02008	ENSG00000239440	52378	None	None
HERVL_3p12.2b	HERV	HERVL	prototype	chr3	82758294	82763332	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02008	ENSG00000239440	294619	CYP51A1P1	ENSG00000241095	43183	None	None
ERVLB4_3p12.2c	HERV	ERVLB4	oneside	chr3	82883334	82886459	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023503.1	ENSG00000288004	497986	CYP51A1P1	ENSG00000241095	75313	None	None
ERVLE_3p12.2i	HERV	ERVLE	internal	chr3	83019239	83020150	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023503.1	ENSG00000288004	364295	CYP51A1P1	ENSG00000241095	211218	None	None
MER34B_3p12.2c	HERV	MER34B	internal	chr3	83285947	83287936	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023503.1	ENSG00000288004	96509	CYP51A1P1	ENSG00000241095	477926	None	None
HERVH_3p12.2b	HERV	HERVH	oneside	chr3	83354176	83357600	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023503.1	ENSG00000288004	26845	CYP51A1P1	ENSG00000241095	546155	None	None
HERVL18_3p12.1	HERV	HERVL18	oneside	chr3	83500375	83504820	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092825.1	ENSG00000286567	419337	AC023503.1	ENSG00000288004	62647	None	None
ERVLE_3p12.1a	HERV	ERVLE	internal	chr3	83509310	83510913	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023503.1	ENSG00000288004	71582	AC092825.1	ENSG00000286567	413244	None	None
HERVL_3p12.1a	HERV	HERVL	oneside	chr3	83552394	83553856	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092825.1	ENSG00000286567	370301	AC023503.1	ENSG00000288004	114666	None	None
ERVL_3p12.1	HERV	ERVL	oneside	chr3	83751693	83753084	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023503.1	ENSG00000288004	313965	AC092825.1	ENSG00000286567	171073	None	None
MER101_3p12.1	HERV	MER101	internal	chr3	83910398	83911080	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092825.1	ENSG00000286567	13077	AC023503.1	ENSG00000288004	472670	None	None
MER61_3p12.1	HERV	MER61	internal	chr3	83927633	83934485	+	noncoding	AC092825.1	lncRNA	ANTISENSE	ENSG00000286567	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_3p12.1	HERV	MER41	internal	chr3	84045604	84049434	+	noncoding	AC117464.1	lncRNA	SENSE	ENSG00000287158	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_3p12.1	HERV	HUERSP1	prototype	chr3	84066891	84074424	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00971	ENSG00000242641	563981	AC117464.1	ENSG00000287158	15472	None	None
HERVH_3p12.1a	HERV	HERVH	prototype	chr3	84187812	84193404	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00971	ENSG00000242641	445001	AC117464.1	ENSG00000287158	136393	None	None
HERVFRD_3p12.1	HERV	HERVFRD	oneside	chr3	84222331	84228702	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00971	ENSG00000242641	409703	AC117464.1	ENSG00000287158	170912	None	None
ERVLB4_3p12.1a	HERV	ERVLB4	oneside	chr3	84315971	84318676	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00971	ENSG00000242641	319729	AC117464.1	ENSG00000287158	264552	None	None
ERV316A3_3p12.1a	HERV	ERV316A3	oneside	chr3	84375976	84379107	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117464.1	ENSG00000287158	324557	LINC00971	ENSG00000242641	259298	None	None
HERVL_3p12.1b	HERV	HERVL	prototype	chr3	84465713	84472282	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117464.1	ENSG00000287158	414294	LINC00971	ENSG00000242641	166123	None	None
ERV316A3_3p12.1b	HERV	ERV316A3	oneside	chr3	84788526	84790281	+	noncoding	LINC00971	lncRNA	ANTISENSE	ENSG00000242641	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p12.1b	HERV	ERVLE	internal	chr3	84909814	84916301	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02025	ENSG00000242339	16435	AC132660.2	ENSG00000287273	24318	None	None
ERVLB4_3p12.1b	HERV	ERVLB4	internal	chr3	86127828	86130131	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107024.1	ENSG00000201410	2541	RNU6-1129P	ENSG00000251773	105190	None	None
ERV316A3_3p12.1c	HERV	ERV316A3	oneside	chr3	86154014	86155771	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1129P	ENSG00000251773	79550	AC107024.1	ENSG00000201410	28727	None	None
ERVLE_3p12.1c	HERV	ERVLE	internal	chr3	86442196	86448293	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP284	ENSG00000222934	79722	LINC02070	ENSG00000241328	33650	None	None
HERVL_3p12.1c	HERV	HERVL	oneside	chr3	86444973	86447201	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP284	ENSG00000222934	82499	LINC02070	ENSG00000241328	34742	None	None
HERVH_3p12.1b	HERV	HERVH	prototype	chr3	86537069	86543930	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108706.1	ENSG00000277746	272810	LINC02070	ENSG00000241328	40073	None	None
HUERSP3_3p12.1	HERV	HUERSP3	prototype	chr3	86617274	86624690	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02070	ENSG00000241328	120278	AC108706.1	ENSG00000277746	192050	None	None
HERV30_3p12.1	HERV	HERV30	prototype	chr3	86691552	86697023	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108706.1	ENSG00000277746	119717	LINC02070	ENSG00000241328	194556	None	None
ERV316A3_3p12.1d	HERV	ERV316A3	prototype	chr3	86912674	86915479	+	noncoding	VGLL3	protein_coding	ANTISENSE	ENSG00000206538	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p12.1d	HERV	ERVLE	internal	chr3	86925892	86928065	-	noncoding	VGLL3	protein_coding	SENSE	ENSG00000206538	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL32_3p12.1	HERV	HERVL32	oneside	chr3	87036345	87038886	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPATP1	ENSG00000241293	12306	VGLL3	ENSG00000206538	45196	None	None
ERVLE_3p12.1e	HERV	ERVLE	internal	chr3	87067654	87071334	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPATP1	ENSG00000241293	14916	AC107204.1	ENSG00000281392	17795	None	None
MER61_3p11.2	HERV	MER61	prototype	chr3	87141103	87146130	+	noncoding	AC107204.1	lncRNA	SENSE	ENSG00000281392	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3p11.2a	HERV	ERVLE	internal	chr3	87364866	87365692	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	APOOP2	ENSG00000240902	229146	KRT8P25	ENSG00000239829	40143	None	None
ERVLE_3p11.2b	HERV	ERVLE	internal	chr3	87365732	87367130	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	APOOP2	ENSG00000240902	227708	KRT8P25	ENSG00000239829	41009	None	chr3:87365729-87365737
ERV316A3_3p11.2	HERV	ERV316A3	oneside	chr3	87374292	87377308	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	APOOP2	ENSG00000240902	217530	KRT8P25	ENSG00000239829	49569	None	None
HERVH_3p11.2	HERV	HERVH	oneside	chr3	87570732	87575761	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P25	ENSG00000239829	246009	APOOP2	ENSG00000240902	19077	None	None
HERVIP10F_3p11.2	HERV	HERVIP10F	prototype	chr3	87607122	87616195	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PSMC1P6	ENSG00000240255	14106	APOOP2	ENSG00000240902	11746	None	None
ERVLE_3p11.2c	HERV	ERVLE	internal	chr3	87667420	87668411	+	noncoding	AC108749.1	lncRNA	ANTISENSE	ENSG00000239572	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_3p11.2	HERV	HARLEQUIN	prototype	chr3	87733672	87741260	-	noncoding	AC108749.1	lncRNA	SENSE	ENSG00000239572	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_3p11.2	HERV	HERVL40	internal	chr3	87743467	87744174	+	noncoding	AC108749.1	lncRNA	ANTISENSE	ENSG00000239572	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_3p11.1	HERV	HERVW	oneside	chr3	87940794	87946379	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HTR1F	ENSG00000179097	44317	RNU6ATAC6P	ENSG00000221059	30449	None	None
ERV316A3_3p11.1	HERV	ERV316A3	internal	chr3	88027843	88029549	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CGGBP1	ENSG00000163320	22395	HTR1F	ENSG00000179097	34008	None	None
ERVLB4_3p11.1a	HERV	ERVLB4	oneside	chr3	88037910	88039035	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CGGBP1	ENSG00000163320	12909	HTR1F	ENSG00000179097	44075	None	None
ERVLB4_3p11.1b	HERV	ERVLB4	oneside	chr3	88039070	88044076	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CGGBP1	ENSG00000163320	7868	HTR1F	ENSG00000179097	45235	None	None
ERVLB4_3p11.1c	HERV	ERVLB4	oneside	chr3	88171228	88174639	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C3orf38	ENSG00000179021	2499	ABCF2P1	ENSG00000242159	142517	None	None
ERVLE_3p11.1a	HERV	ERVLE	internal	chr3	89585323	89586646	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO2P6	ENSG00000240951	1240	EPHA3	ENSG00000044524	103189	None	None
ERVLE_3p11.1b	HERV	ERVLE	internal	chr3	89590564	89591101	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC095349.1	ENSG00000212598	439183	MTCO1P6	ENSG00000240309	467	None	None
ERVLE_3p11.1c	HERV	ERVLE	internal	chr3	89597113	89597684	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO1P6	ENSG00000240309	7016	AC095349.1	ENSG00000212598	432600	None	None
ERVLE_3p11.1d	HERV	ERVLE	internal	chr3	89598495	89600953	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC095349.1	ENSG00000212598	429331	MTCO1P6	ENSG00000240309	8398	None	None
ERVLB4_3p11.1d	HERV	ERVLB4	prototype	chr3	90045286	90050370	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-712P	ENSG00000222490	134264	AC095349.1	ENSG00000212598	14791	None	None
HERVL40_3p11.1	HERV	HERVL40	prototype	chr3	90060168	90065857	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC095349.1	ENSG00000212598	29673	RNU6-712P	ENSG00000222490	118777	None	None
HERVH_3p11.1a	HERV	HERVH	oneside	chr3	90071545	90072981	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-712P	ENSG00000222490	111653	AC095349.1	ENSG00000212598	41050	None	None
HERVH_3p11.1b	HERV	HERVH	prototype	chr3	90082984	90086728	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC095349.1	ENSG00000212598	52489	RNU6-712P	ENSG00000222490	97906	chr3:90083603-90083959	None
HERVL_3q11.1	HERV	HERVL	oneside	chr3	91353731	91356452	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ABBA01000933.1	ENSG00000283367	303	HSPE1P19	ENSG00000271024	1092023	None	None
HERVH_3q11.1	HERV	HERVH	prototype	chr3	93938055	93944071	+	noncoding	PROS1	protein_coding	ANTISENSE	ENSG00000184500	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q11.1	HERV	ERVLE	internal	chr3	93961783	93963470	+	noncoding	PROS1	protein_coding	ANTISENSE	ENSG00000184500	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_3q11.2	HERV	PRIMA4	internal	chr3	94294606	94299986	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NSUN3	ENSG00000178694	162774	ARMC10P1	ENSG00000178660	206780	None	None
ERVLE_3q11.2a	HERV	ERVLE	internal	chr3	94319866	94320712	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NSUN3	ENSG00000178694	188034	ARMC10P1	ENSG00000178660	186054	None	None
HUERSP2_3q11.2a	HERV	HUERSP2	prototype	chr3	94469271	94474066	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARMC10P1	ENSG00000178660	32700	NSUN3	ENSG00000178694	337439	None	None
ERVLE_3q11.2b	HERV	ERVLE	internal	chr3	94493015	94497371	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARMC10P1	ENSG00000178660	9395	NSUN3	ENSG00000178694	361183	None	None
ERVLE_3q11.2c	HERV	ERVLE	internal	chr3	94557796	94559210	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARMC10P1	ENSG00000178660	50176	AC140059.1	ENSG00000242911	376550	None	None
ERVLE_3q11.2d	HERV	ERVLE	internal	chr3	94561987	94564227	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC140059.1	ENSG00000242911	371533	ARMC10P1	ENSG00000178660	54367	None	None
ERVLE_3q11.2e	HERV	ERVLE	internal	chr3	94571211	94574050	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC140059.1	ENSG00000242911	361710	ARMC10P1	ENSG00000178660	63591	None	None
ERV316A3_3q11.2a	HERV	ERV316A3	internal	chr3	94601590	94605066	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC140059.1	ENSG00000242911	330694	ARMC10P1	ENSG00000178660	93970	None	None
HERVK11D_3q11.2	HERV	HERVK11D	oneside	chr3	94647179	94651193	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ARMC10P1	ENSG00000178660	139559	AC140059.1	ENSG00000242911	284567	None	chr3:94648080-94648100
ERV316A3_3q11.2b	HERV	ERV316A3	oneside	chr3	94692828	94695259	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC140059.1	ENSG00000242911	240501	ARMC10P1	ENSG00000178660	185208	None	None
HERVL_3q11.2c	HERV	HERVL	insert*	chr3	94729719	94732825	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC140059.1	ENSG00000242911	202935	ARMC10P1	ENSG00000178660	222099	None	None
HERVL_3q11.2a	HERV	HERVL	prototype	chr3	94886367	94889689	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARMC10P1	ENSG00000178660	378747	AC140059.1	ENSG00000242911	46071	None	None
MER4_3q11.2a	HERV	MER4	prototype	chr3	95212144	95218188	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS18P6	ENSG00000244048	39767	MTHFD2P1	ENSG00000244681	436235	None	None
MER61_3q11.2a	HERV	MER61	prototype	chr3	95407731	95412947	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS18P6	ENSG00000244048	235354	MTHFD2P1	ENSG00000244681	241476	chr3:95407841-95407960	None
ERV316A3_3q11.2c	HERV	ERV316A3	oneside	chr3	95447125	95447989	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTHFD2P1	ENSG00000244681	206434	RPS18P6	ENSG00000244048	274748	None	None
ERVLE_3q11.2f	HERV	ERVLE	internal	chr3	95457408	95458323	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTHFD2P1	ENSG00000244681	196100	RPS18P6	ENSG00000244048	285031	None	None
MER101_3q11.2a	HERV	MER101	oneside	chr3	95468831	95473367	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTHFD2P1	ENSG00000244681	181056	RPS18P6	ENSG00000244048	296454	None	None
LTR57_3q11.2	HERV	LTR57	internal	chr3	95473368	95474323	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTHFD2P1	ENSG00000244681	180100	RPS18P6	ENSG00000244048	300991	None	None
MER101_3q11.2b	HERV	MER101	oneside	chr3	95474626	95476855	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTHFD2P1	ENSG00000244681	177568	RPS18P6	ENSG00000244048	302249	None	None
ERV316A3_3q11.2d	HERV	ERV316A3	oneside	chr3	95615144	95616787	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS18P6	ENSG00000244048	442767	MTHFD2P1	ENSG00000244681	37636	None	None
ERVLE_3q11.2g	HERV	ERVLE	internal	chr3	95807126	95807726	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTHFD2P1	ENSG00000244681	123933	AC106719.1	ENSG00000286516	109000	None	None
HERV9_3q11.2	HERV	HERV9	prototype	chr3	95948663	95951715	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC107304.1	ENSG00000271671	293017	AC106719.1	ENSG00000286516	29111	None	None
ERVLB4_3q11.2a	HERV	ERVLB4	oneside	chr3	95959088	95959898	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC106719.1	ENSG00000286516	39536	AC107304.1	ENSG00000271671	284834	None	None
MER41_3q11.2	HERV	MER41	internal	chr3	96171226	96175156	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC106719.1	ENSG00000286516	251674	AC107304.1	ENSG00000271671	69576	None	None
ERVLE_3q11.2h	HERV	ERVLE	internal	chr3	96188944	96191218	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC106719.1	ENSG00000286516	269392	AC107304.1	ENSG00000271671	53514	None	None
ERV316A3_3q11.2e	HERV	ERV316A3	oneside	chr3	96238159	96241296	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107304.1	ENSG00000271671	3436	AC106719.1	ENSG00000286516	318607	None	None
ERV316A3_3q11.2f	HERV	ERV316A3	internal	chr3	96241531	96243435	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107304.1	ENSG00000271671	1297	AC106719.1	ENSG00000286516	321979	None	None
ERVLE_3q11.2i	HERV	ERVLE	internal	chr3	96361741	96363682	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107015.1	ENSG00000241815	202675	MIR8060	ENSG00000278103	1702	None	None
HERVW_3q11.2	HERV	HERVW	prototype	chr3	96666475	96675444	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RCC2P5	ENSG00000241018	77741	RPL18AP8	ENSG00000218754	46644	None	None
HUERSP2_3q11.2b	HERV	HUERSP2	prototype	chr3	96699598	96704333	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL18AP8	ENSG00000218754	79767	RCC2P5	ENSG00000241018	48852	None	None
ERV316A3_3q11.2g	HERV	ERV316A3	internal	chr3	96730288	96734286	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RCC2P5	ENSG00000241018	18899	RPL18AP8	ENSG00000218754	110457	None	None
ERVLB4_3q11.2b	HERV	ERVLB4	oneside	chr3	97157563	97164311	-	noncoding	EPHA6	protein_coding	ANTISENSE	ENSG00000080224	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3q11.2a	HERV	HERVH	prototype	chr3	97272463	97277550	-	noncoding	EPHA6	protein_coding	ANTISENSE	ENSG00000080224	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3q11.2b	HERV	HERVL	prototype	chr3	97773026	97775656	-	noncoding	ARL6	protein_coding	ANTISENSE	ENSG00000113966	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_3q11.2b	HERV	MER61	prototype	chr3	98109337	98114913	+	noncoding	AC117460.1	lncRNA	ANTISENSE	ENSG00000249225	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3q11.2c	HERV	ERVLB4	oneside	chr3	98124302	98126191	-	noncoding	AC117460.1	lncRNA	SENSE	ENSG00000249225	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_3q11.2a	HERV	MER34B	oneside	chr3	98136997	98139861	-	noncoding	AC117460.1,OR5H1	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000249225,ENSG00000231192	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3q11.2d	HERV	ERVLB4	internal	chr3	98160635	98164524	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5H15	ENSG00000233412	2172	OR5H14	ENSG00000236032	4021	None	None
MER34B_3q11.2b	HERV	MER34B	internal	chr3	98173028	98174082	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5H5P	ENSG00000249321	23129	OR5H15	ENSG00000233412	3254	None	None
MER34B_3q11.2c	HERV	MER34B	oneside	chr3	98180251	98182577	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5H5P	ENSG00000249321	14634	OR5H15	ENSG00000233412	10477	None	None
HUERSP3B_3q11.2	HERV	HUERSP3B	oneside	chr3	98186061	98189085	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5H5P	ENSG00000249321	8126	OR5H15	ENSG00000233412	16287	None	None
HERVH_3q11.2b	HERV	HERVH	prototype	chr3	98191088	98196791	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5H15	ENSG00000233412	21314	OR5H5P	ENSG00000249321	420	None	chr3:98191353-98191362,chr3:98191419-98191447
ERVLB4_3q11.2e	HERV	ERVLB4	internal	chr3	98200527	98203873	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5H3P	ENSG00000249975	3550	OR5H5P	ENSG00000249321	2389	None	None
MER34B_3q11.2d	HERV	MER34B	internal	chr3	98241688	98243628	-	noncoding	AC117473.1	lncRNA	ANTISENSE	ENSG00000251088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:98243557-98243572
HERVH_3q11.2c	HERV	HERVH	prototype	chr3	98243922	98249844	+	noncoding	AC117473.1	lncRNA	SENSE	ENSG00000251088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:98244870-98244876,chr3:98249755-98249757
MER34B_3q11.2e	HERV	MER34B	internal	chr3	98265760	98266450	-	noncoding	AC117473.1	lncRNA	ANTISENSE	ENSG00000251088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_3q11.2f	HERV	MER34B	oneside	chr3	98272722	98273927	-	noncoding	AC117473.1	lncRNA	ANTISENSE	ENSG00000251088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3q11.2f	HERV	ERVLB4	oneside	chr3	98318750	98322074	-	noncoding	AC117473.1	lncRNA	ANTISENSE	ENSG00000251088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q11.2j	HERV	ERVLE	internal	chr3	98340308	98341131	-	noncoding	AC117473.1	lncRNA	ANTISENSE	ENSG00000251088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_3q11.2b	HERV	MER4	oneside	chr3	98366003	98367518	+	noncoding	AC117473.1	lncRNA	SENSE	ENSG00000251088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3q12.1a	HERV	HERVL	prototype	chr3	98629266	98632313	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	WWP1P1	ENSG00000244153	25489	AC021660.1	ENSG00000240827	8648	None	None
HERV4_3q12.1	HERV	HERV4	oneside	chr3	99258405	99260461	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107297.1	ENSG00000240572	65916	ACTG1P13	ENSG00000241305	42139	None	None
HERVL_3q12.1b	HERV	HERVL	prototype	chr3	99260466	99264067	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107297.1	ENSG00000240572	62310	ACTG1P13	ENSG00000241305	44200	None	None
ERV316A3_3q12.1a	HERV	ERV316A3	oneside	chr3	99390080	99395019	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC078828.1	ENSG00000243296	105328	AC107297.1	ENSG00000240572	63528	None	None
ERV316A3_3q12.1b	HERV	ERV316A3	oneside	chr3	99466687	99467875	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC078828.1	ENSG00000243296	32472	AC107297.1	ENSG00000240572	140135	None	None
ERV316A3_3q12.1c	HERV	ERV316A3	prototype	chr3	99608527	99612272	-	noncoding	AC107029.2	lncRNA	ANTISENSE	ENSG00000244464	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q12.1d	HERV	ERV316A3	internal	chr3	99808942	99811648	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CMSS1	ENSG00000184220	6189	AC069222.1	ENSG00000273374	2884	None	None
HERVL_3q12.1c	HERV	HERVL	unknown	chr3	100237370	100243393	+	coding	AC129803.1	lncRNA	ANTISENSE	ENSG00000287378	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_3q12.2	HERV	MER4	prototype	chr3	100442292	100451599	-	noncoding	LNP1	protein_coding	ANTISENSE	ENSG00000206535	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_3q12.2	HERV	LTR25	internal	chr3	100466409	100472339	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LNP1	ENSG00000206535	10090	TMEM45A	ENSG00000181458	20280	None	None
HERVL40_3q12.2	HERV	HERVL40	oneside	chr3	100486011	100490844	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM45A	ENSG00000181458	1775	LNP1	ENSG00000206535	29692	None	None
MER41_3q12.2	HERV	MER41	internal	chr3	100581635	100587331	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADGRG7	ENSG00000144820	22270	TMEM45A	ENSG00000181458	4191	None	None
ERVL_3q12.2	HERV	ERVL	oneside	chr3	101036422	101038311	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ABI3BP	ENSG00000154175	42907	ACTR3P3	ENSG00000242573	124783	chr3:101036212-101036620	None
HERVS71_3q12.3	HERV	HERVS71	prototype	chr3	101632045	101642056	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC084198.2	ENSG00000212319	3639	AC084198.1	ENSG00000201511	5365	chr3:101634698-101634965,chr3:101636341-101636691	chr3:101632490-101632495
HML2_3q12.3	HERV	HML2	prototype	chr3	101691893	101701015	+	coding	AC084198.4	lncRNA	SENSE	ENSG00000286699	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3q12.3	HERV	ERVLB4	oneside	chr3	102000517	102005700	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZPLD1	ENSG00000170044	93544	AC106712.2	ENSG00000241280	2591	None	None
ERV316A3_3q12.3	HERV	ERV316A3	internal	chr3	102005731	102006471	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZPLD1	ENSG00000170044	92773	AC106712.2	ENSG00000241280	7805	None	None
ERVLE_3q12.3a	HERV	ERVLE	internal	chr3	102353786	102356369	+	noncoding	ZPLD1	protein_coding	SENSE	ENSG00000170044	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_3q12.3	HERV	HERVL18	prototype	chr3	102735696	102742206	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC063938.1	ENSG00000241754	61710	RNU6-461P	ENSG00000201065	12858	None	None
ERVLE_3q12.3b	HERV	ERVLE	internal	chr3	102810917	102811511	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-43P	ENSG00000201922	348449	RNU6-461P	ENSG00000201065	55747	None	None
HERVL40_3q12.3	HERV	HERVL40	oneside	chr3	103039407	103040253	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-43P	ENSG00000201922	119707	RNU6-461P	ENSG00000201065	284237	None	None
PRIMA41_3q12.3	HERV	PRIMA41	internal	chr3	103051056	103055623	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-43P	ENSG00000201922	104337	RNU6-461P	ENSG00000201065	295886	None	None
ERV316A3_3q13.11a	HERV	ERV316A3	internal	chr3	103191678	103194268	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-43P	ENSG00000201922	31554	NDUFA4P2	ENSG00000236691	46719	None	None
HML3_3q13.11a	HERV	HML3	prototype	chr3	103208941	103215975	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-43P	ENSG00000201922	48817	NDUFA4P2	ENSG00000236691	25012	None	None
HERVL_3q13.11a	HERV	HERVL	oneside	chr3	103278519	103284484	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548AB	ENSG00000265328	239549	NDUFA4P2	ENSG00000236691	37289	None	None
ERV316A3_3q13.11b	HERV	ERV316A3	internal	chr3	103356358	103357465	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFA4P2	ENSG00000236691	115128	MIR548AB	ENSG00000265328	166568	None	None
HERVL_3q13.11b	HERV	HERVL	prototype	chr3	103594502	103601017	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUBBP11	ENSG00000243195	29644	AC046144.1	ENSG00000240107	54015	None	None
ERVLE_3q13.11a	HERV	ERVLE	internal	chr3	103729504	103731400	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAP1BP2	ENSG00000214405	331639	TUBBP11	ENSG00000243195	98592	None	None
ERVL_3q13.11	HERV	ERVL	oneside	chr3	103744331	103746855	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAP1BP2	ENSG00000214405	316184	TUBBP11	ENSG00000243195	113419	None	None
HUERSP2_3q13.11	HERV	HUERSP2	prototype	chr3	103988897	103993299	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAP1BP2	ENSG00000214405	69740	TUBBP11	ENSG00000243195	357985	chr3:103991712-103992017	chr3:103991977-103991983
ERV316A3_3q13.11c	HERV	ERV316A3	internal	chr3	104156341	104157699	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091804.1	ENSG00000243635	345001	RAP1BP2	ENSG00000214405	92759	None	None
ERV316A3_3q13.11d	HERV	ERV316A3	oneside	chr3	104158001	104159204	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091804.1	ENSG00000243635	343496	RAP1BP2	ENSG00000214405	94419	None	None
ERVLE_3q13.11b	HERV	ERVLE	internal	chr3	104211464	104214604	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAP1BP2	ENSG00000214405	147882	AC091804.1	ENSG00000243635	288096	None	None
ERVLB4_3q13.11a	HERV	ERVLB4	oneside	chr3	104233531	104235425	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAP1BP2	ENSG00000214405	169949	AC091804.1	ENSG00000243635	267275	None	None
HUERSP3B_3q13.11	HERV	HUERSP3B	oneside	chr3	104273436	104280102	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091804.1	ENSG00000243635	222598	RAP1BP2	ENSG00000214405	209854	None	None
MER101_3q13.11a	HERV	MER101	internal	chr3	104280238	104281427	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091804.1	ENSG00000243635	221273	RAP1BP2	ENSG00000214405	216656	None	None
HML3_3q13.11b	HERV	HML3	prototype	chr3	104281432	104287467	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091804.1	ENSG00000243635	215233	RAP1BP2	ENSG00000214405	217850	None	None
MER101_3q13.11b	HERV	MER101	internal	chr3	104288063	104289169	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091804.1	ENSG00000243635	213531	RAP1BP2	ENSG00000214405	224481	None	None
MER4_3q13.11	HERV	MER4	prototype	chr3	104346780	104352104	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAP1BP2	ENSG00000214405	283198	AC091804.1	ENSG00000243635	150596	None	None
MER4B_3q13.11	HERV	MER4B	internal	chr3	104348264	104349159	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAP1BP2	ENSG00000214405	284682	AC091804.1	ENSG00000243635	153541	None	None
HERVH_3q13.11	HERV	HERVH	prototype	chr3	104439928	104445775	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091804.1	ENSG00000243635	56925	RAP1BP2	ENSG00000214405	376346	None	chr3:104445372-104445385
HERVL_3q13.11c	HERV	HERVL	oneside	chr3	104449680	104451039	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091804.1	ENSG00000243635	51661	RAP1BP2	ENSG00000214405	386098	None	None
ERVLE_3q13.11c	HERV	ERVLE	internal	chr3	104457868	104458473	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091804.1	ENSG00000243635	44227	RAP1BP2	ENSG00000214405	394286	None	None
ERV316A3_3q13.11e	HERV	ERV316A3	internal	chr3	104622113	104623543	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091804.1	ENSG00000243635	118847	ALCAM	ENSG00000170017	743366	None	None
ERV316A3_3q13.11f	HERV	ERV316A3	internal	chr3	104931932	104933129	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091804.1	ENSG00000243635	428666	ALCAM	ENSG00000170017	433780	None	None
ERV316A3_3q13.11g	HERV	ERV316A3	oneside	chr3	105021255	105025285	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091804.1	ENSG00000243635	517989	ALCAM	ENSG00000170017	341624	None	None
ERV316A3_3q13.11h	HERV	ERV316A3	internal	chr3	105201815	105204824	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091804.1	ENSG00000243635	698549	ALCAM	ENSG00000170017	162085	None	None
ERVLB4_3q13.11b	HERV	ERVLB4	oneside	chr3	105277481	105279418	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ALCAM	ENSG00000170017	87491	AC091804.1	ENSG00000243635	774215	None	None
HERVL_3q13.11d	HERV	HERVL	prototype	chr3	105601061	105607582	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CBLB	ENSG00000114423	47879	ALCAM	ENSG00000170017	24161	None	None
ERVLB4_3q13.11c	HERV	ERVLB4	unknown	chr3	105626779	105629925	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CBLB	ENSG00000114423	25536	ALCAM	ENSG00000170017	49879	None	None
ERVLE_3q13.11d	HERV	ERVLE	internal	chr3	106001398	106002375	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CBLB	ENSG00000114423	131846	AC131237.1	ENSG00000287421	158042	None	None
ERV316A3_3q13.11i	HERV	ERV316A3	internal	chr3	106009240	106010400	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CBLB	ENSG00000114423	139688	AC131237.1	ENSG00000287421	150017	None	None
MER61_3q13.11	HERV	MER61	oneside	chr3	106255987	106261144	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC131237.1	ENSG00000287421	31612	AC079382.1	ENSG00000244652	64593	chr3:106255778-106256618	chr3:106256140-106256158,chr3:106256246-106256271,chr3:106255980-106255996
HERVL_3q13.11e	HERV	HERVL	internal	chr3	106358497	106360221	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079382.1	ENSG00000244652	32204	AC079382.2	ENSG00000286854	7758	None	None
ERV316A3_3q13.12a	HERV	ERV316A3	oneside	chr3	106700659	106704034	-	noncoding	LINC00882	lncRNA	SENSE	ENSG00000242759	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3q13.12a	HERV	HERVH	prototype	chr3	106922769	106928372	-	noncoding	LINC00882	lncRNA	SENSE	ENSG00000242759	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q13.12b	HERV	ERV316A3	internal	chr3	107004351	107004960	+	noncoding	LINC00882	lncRNA	ANTISENSE	ENSG00000242759	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_3q13.12	HERV	MER4B	internal	chr3	107134186	107139313	+	noncoding	LINC00882	lncRNA	ANTISENSE	ENSG00000242759	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q13.12c	HERV	ERV316A3	oneside	chr3	107248969	107249989	-	noncoding	DUBR	lncRNA	ANTISENSE	ENSG00000243701	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q13.12d	HERV	ERV316A3	oneside	chr3	107273390	107275095	+	noncoding	DUBR,AC063944.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000243701,ENSG00000239828	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q13.12e	HERV	ERV316A3	prototype	chr3	107318233	107322352	+	noncoding	DUBR,AC063944.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000243701,ENSG00000239828	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_3q13.12b	HERV	HERVH	prototype	chr3	107569409	107571817	-	noncoding	BBX	protein_coding	ANTISENSE	ENSG00000114439	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q13.12f	HERV	ERV316A3	oneside	chr3	107960990	107964886	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012020.1	ENSG00000279277	67570	LINC00636	ENSG00000240423	32083	None	None
ERVLB4_3q13.13	HERV	ERVLB4	oneside	chr3	108208504	108209981	+	noncoding	IFT57	protein_coding	ANTISENSE	ENSG00000114446	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q13.13a	HERV	ERV316A3	oneside	chr3	108233323	108235718	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HHLA2	ENSG00000114455	60772	IFT57	ENSG00000114446	10888	None	None
MER101_3q13.13	HERV	MER101	oneside	chr3	108243189	108250605	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	IFT57	ENSG00000114446	20754	HHLA2	ENSG00000114455	45885	None	None
ERV316A3_3q13.13b	HERV	ERV316A3	oneside	chr3	108276289	108280984	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HHLA2	ENSG00000114455	15506	IFT57	ENSG00000114446	53854	None	None
ERVLE_3q13.13a	HERV	ERVLE	internal	chr3	108334917	108336689	+	noncoding	HHLA2	protein_coding	SENSE	ENSG00000114455	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q13.13b	HERV	ERVLE	internal	chr3	108537244	108538368	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069499.2	ENSG00000241634	4999	MYH15	ENSG00000144821	7922	None	None
ERV316A3_3q13.13c	HERV	ERV316A3	internal	chr3	108627707	108628561	-	noncoding	DZIP3	protein_coding	ANTISENSE	ENSG00000198919	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q13.13c	HERV	ERVLE	internal	chr3	108731337	108732817	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RETNLB	ENSG00000163515	10607	AC092185.1	ENSG00000241777	5801	None	None
HERVL_3q13.13a	HERV	HERVL	prototype	chr3	109774515	109780949	-	noncoding	AC078980.1	lncRNA	ANTISENSE	ENSG00000242029	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3q13.13b	HERV	HERVL	internal	chr3	110046523	110048734	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117430.1	ENSG00000240895	478748	AC078918.1	ENSG00000243945	68756	None	None
ERV316A3_3q13.13d	HERV	ERV316A3	unknown	chr3	110106308	110110375	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117430.1	ENSG00000240895	417107	AC078918.1	ENSG00000243945	128541	None	chr3:110106588-110106593
ERVLE_3q13.13d	HERV	ERVLE	internal	chr3	110173838	110175415	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117430.1	ENSG00000240895	352067	AC078918.1	ENSG00000243945	196071	None	None
ERVLE_3q13.13e	HERV	ERVLE	internal	chr3	110209863	110210533	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC078918.1	ENSG00000243945	232096	AC117430.1	ENSG00000240895	316949	None	None
HERVL40_3q13.13a	HERV	HERVL40	oneside	chr3	110366959	110369801	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117430.1	ENSG00000240895	157681	AC078918.1	ENSG00000243945	389192	None	None
ERVL_3q13.13	HERV	ERVL	internal	chr3	110393060	110398391	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117430.1	ENSG00000240895	129091	AC078918.1	ENSG00000243945	415293	None	None
ERV316A3_3q13.13e	HERV	ERV316A3	oneside	chr3	110426931	110430529	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117430.1	ENSG00000240895	96953	AC078918.1	ENSG00000243945	449164	None	None
HERVL40_3q13.13b	HERV	HERVL40	oneside	chr3	110868380	110870700	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092909.1	ENSG00000201426	141259	NECTIN3-AS1	ENSG00000242242	17684	chr3:110868765-110868777	None
ERVLE_3q13.13f	HERV	ERVLE	internal	chr3	111161253	111162136	-	noncoding	NECTIN3	protein_coding	ANTISENSE	ENSG00000177707	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_3q13.13	HERV	MER41	prototype	chr3	111345961	111351213	-	noncoding	CD96	protein_coding	ANTISENSE	ENSG00000153283	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11_3q13.13	HERV	HERVK11	prototype	chr3	111524145	111530464	+	coding	CD96	protein_coding	SENSE	ENSG00000153283	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_3q13.2	HERV	HERV3	prototype	chr3	112301858	112308531	+	noncoding	AC112487.1	lncRNA	SENSE	ENSG00000239482	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr3:112303923-112304194	chr3:112302448-112302496,chr3:112303263-112303268
MER4_3q13.2a	HERV	MER4	oneside	chr3	112399414	112406136	-	noncoding	AC092894.1	lncRNA	SENSE	ENSG00000243081	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:112404398-112404424
HERVH_3q13.2	HERV	HERVH	prototype	chr3	112418412	112423365	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BTLA	ENSG00000186265	40601	AC092894.1	ENSG00000243081	9278	None	chr3:112421293-112421323
MER4_3q13.2b	HERV	MER4	internal	chr3	112510562	112514942	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR7E100P	ENSG00000242525	9245	BTLA	ENSG00000186265	11090	None	None
PRIMA41_3q13.2	HERV	PRIMA41	prototype	chr3	112644325	112645719	-	noncoding	CCDC80	protein_coding	SENSE	ENSG00000091986	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3q13.2	HERV	HERVL	oneside	chr3	112694118	112700907	+	noncoding	AC048334.1	unprocessed_pseudogene	ANTISENSE	ENSG00000242308	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q13.2a	HERV	ERV316A3	internal	chr3	112832088	112834559	+	noncoding	CD200R1L	protein_coding	ANTISENSE	ENSG00000206531	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q13.2a	HERV	ERVLE	internal	chr3	112839154	112840697	+	noncoding	CD200R1L	protein_coding	ANTISENSE	ENSG00000206531	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_3q13.2a	HERV	HERVL74	oneside	chr3	112846935	112848685	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CD200R1	ENSG00000163606	72520	CD200R1L	ENSG00000206531	79	None	None
HERVL74_3q13.2b	HERV	HERVL74	oneside	chr3	112855652	112856844	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CD200R1	ENSG00000163606	64361	CD200R1L	ENSG00000206531	8796	None	None
HML2_3q13.2	HERV	HML2	prototype	chr3	113024277	113033435	-	coding	AC078785.1	lncRNA	ANTISENSE	ENSG00000240057	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q13.2b	HERV	ERVLE	internal	chr3	113036547	113037824	+	noncoding	AC078785.1	lncRNA	SENSE	ENSG00000240057	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q13.2c	HERV	ERVLE	internal	chr3	113076676	113077279	+	noncoding	AC078785.1	lncRNA	SENSE	ENSG00000240057	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q13.2b	HERV	ERV316A3	oneside	chr3	113185093	113187839	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC078785.1	ENSG00000240057	716	BOC	ENSG00000144857	23164	None	None
HUERSP2_3q13.2	HERV	HUERSP2	oneside	chr3	113338561	113341339	-	noncoding	CFAP44	protein_coding	SENSE	ENSG00000206530	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3q13.31	HERV	ERVLB4	oneside	chr3	113998492	114000558	+	noncoding	CCDC191,AC092896.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000163617,ENSG00000285836	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q13.31a	HERV	ERV316A3	oneside	chr3	114113384	114117765	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	H2BP3	ENSG00000240912	9756	DRD3	ENSG00000151577	9815	None	None
MER41_3q13.31a	HERV	MER41	prototype	chr3	114258979	114262967	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TIGIT	ENSG00000181847	13946	ZNF80	ENSG00000174255	21401	None	None
MER4_3q13.31	HERV	MER4	prototype	chr3	115185448	115192571	+	noncoding	AC026341.1	lncRNA	SENSE	ENSG00000242880	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q13.31b	HERV	ERV316A3	prototype	chr3	115432539	115438659	+	noncoding	AC026341.1,AC026341.2,AC026341.3	lncRNA,lncRNA,lncRNA	SENSE,ANTISENSE,SENSE	ENSG00000242880,ENSG00000287795,ENSG00000288074	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVW_3q13.31	HERV	HERVW	oneside	chr3	115744575	115746918	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAP43	ENSG00000172020	23085	LSAMP	ENSG00000185565	55445	None	None
HERVH_3q13.31a	HERV	HERVH	prototype	chr3	115793483	115799166	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LSAMP	ENSG00000185565	3197	GAP43	ENSG00000172020	71993	None	None
HERVH_3q13.31b	HERV	HERVH	prototype	chr3	116105357	116111228	-	noncoding	LSAMP	protein_coding	SENSE	ENSG00000185565	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:116105462-116105464,chr3:116106039-116106050,chr3:116108653-116108662
HERVL_3q13.31	HERV	HERVL	prototype	chr3	116572122	116578479	+	noncoding	LSAMP	protein_coding	ANTISENSE	ENSG00000185565	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q13.31c	HERV	ERV316A3	prototype	chr3	116991586	116996187	+	noncoding	LSAMP	protein_coding	ANTISENSE	ENSG00000185565	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_3q13.31b	HERV	MER41	prototype	chr3	117025484	117034293	+	coding	LSAMP,PTMAP8	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000185565,ENSG00000243014	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:117026514-117026523
ERV316A3_3q13.32	HERV	ERV316A3	oneside	chr3	118297050	118298465	+	noncoding	AC068633.1	lncRNA	ANTISENSE	ENSG00000243276	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3q13.32	HERV	HERVL	oneside	chr3	118358463	118364569	-	coding	AC068633.1	lncRNA	SENSE	ENSG00000243276	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_3q13.32	HERV	MER41	prototype	chr3	118589641	118594970	+	noncoding	AC068633.1	lncRNA	ANTISENSE	ENSG00000243276	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q13.32	HERV	ERVLE	internal	chr3	118735081	118739848	-	noncoding	AC068633.1	lncRNA	SENSE	ENSG00000243276	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_3q13.32	HERV	HERVL18	oneside	chr3	118801874	118803365	-	noncoding	AC068633.1	lncRNA	SENSE	ENSG00000243276	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:118803070-118803075
HERVW_3q13.32	HERV	HERVW	internal	chr3	118842668	118851684	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068633.1	ENSG00000243276	31832	IGSF11	ENSG00000144847	48873	None	None
MER34B_3q13.32a	HERV	MER34B	internal	chr3	119244016	119244641	-	noncoding	B4GALT4-AS1	lncRNA	ANTISENSE	ENSG00000240254	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_3q13.32b	HERV	MER34B	unknown	chr3	119253277	119257533	-	noncoding	B4GALT4-AS1	lncRNA	ANTISENSE	ENSG00000240254	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMAX_3q13.33	HERV	PRIMAX	internal	chr3	119688771	119693210	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	COX17	ENSG00000138495	11317	MAATS1	ENSG00000183833	9812	None	None
LTR19_3q13.33a	HERV	LTR19	oneside	chr3	119978045	119981228	+	noncoding	GSK3B	protein_coding	ANTISENSE	ENSG00000082701	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_3q13.33b	HERV	LTR19	oneside	chr3	119987334	119990480	+	noncoding	GSK3B	protein_coding	ANTISENSE	ENSG00000082701	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_3q13.33	HERV	HERVFRD	prototype	chr3	120505446	120511907	+	noncoding	AC126182.3	lncRNA	SENSE	ENSG00000286735	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q13.33a	HERV	ERVLE	internal	chr3	120579300	120580209	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC126182.2	ENSG00000244441	66112	NDUFB4	ENSG00000065518	16119	None	None
ERV316A3_3q13.33a	HERV	ERV316A3	oneside	chr3	120603293	120604294	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HGD	ENSG00000113924	23878	NDUFB4	ENSG00000065518	786	None	None
ERVLE_3q13.33b	HERV	ERVLE	internal	chr3	120604306	120605379	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HGD	ENSG00000113924	22793	NDUFB4	ENSG00000065518	1799	None	None
HERVIP10FH_3q13.33	HERV	HERVIP10FH	prototype	chr3	120616727	120623770	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HGD	ENSG00000113924	4402	NDUFB4	ENSG00000065518	14220	None	None
MER4B_3q13.33	HERV	MER4B	prototype	chr3	120648751	120650437	+	noncoding	HGD	protein_coding	ANTISENSE	ENSG00000113924	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q13.33b	HERV	ERV316A3	oneside	chr3	121007649	121011384	-	noncoding	STXBP5L	protein_coding	ANTISENSE	ENSG00000145087	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q13.33c	HERV	ERVLE	internal	chr3	121127120	121130720	+	noncoding	STXBP5L	protein_coding	SENSE	ENSG00000145087	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_3q13.33a	HERV	MER101	internal	chr3	121225111	121226280	-	noncoding	STXBP5L	protein_coding	ANTISENSE	ENSG00000145087	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_3q13.33b	HERV	MER101	internal	chr3	121226367	121230881	-	noncoding	STXBP5L	protein_coding	ANTISENSE	ENSG00000145087	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_3q13.33	HERV	HML3	oneside	chr3	121395494	121399876	-	noncoding	STXBP5L,AC079841.2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000145087,ENSG00000287022	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PABLB_3q13.33	HERV	PABLB	internal	chr3	121604425	121605964	-	noncoding	FBXO40	protein_coding	ANTISENSE	ENSG00000163833	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_3q13.33	HERV	PRIMA41	internal	chr3	121607609	121613599	-	noncoding	FBXO40	protein_coding	ANTISENSE	ENSG00000163833	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q13.33d	HERV	ERVLE	internal	chr3	121975840	121976641	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ILDR1	ENSG00000145103	10682	SLC15A2	ENSG00000163406	31652	None	None
HERVH_3q21.2a	HERV	HERVH	prototype	chr3	124752578	124758183	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ITGB5	ENSG00000082781	3765	UMPS	ENSG00000114491	3305	None	None
HERVL_3q21.2	HERV	HERVL	prototype	chr3	125615135	125619322	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OSBPL11	ENSG00000144909	19638	AF186996.3	ENSG00000243072	60251	None	None
HERVE_3q21.2a	HERV	HERVE	oneside	chr3	125694140	125698910	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF186996.2	ENSG00000242001	12687	OR7E130P	ENSG00000234458	4439	None	None
HERVE_3q21.2b	HERV	HERVE	internal	chr3	125717086	125721147	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR7E29P	ENSG00000243429	4041	OR7E93P	ENSG00000228963	3392	None	None
HERVE_3q21.2c	HERV	HERVE	internal	chr3	125739718	125743769	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR7E53P	ENSG00000239978	4520	OR7E97P	ENSG00000179170	3315	None	None
ERVLB4_3q21.2	HERV	ERVLB4	internal	chr3	125764216	125764785	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092902.4	ENSG00000284624	1731	AF186996.1	ENSG00000239432	7754	None	None
HERVS71_3q21.2	HERV	HERVS71	prototype	chr3	125831940	125839359	+	noncoding	AC092902.4,LINC02614	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000284624,ENSG00000241288	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:125836367-125836511	chr3:125836507-125836511
HERVH_3q21.2b	HERV	HERVH	prototype	chr3	125863750	125869497	+	noncoding	LINC02614,ENPP7P4	lncRNA,transcribed_unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000241288,ENSG00000241278	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML2_3q21.2	HERV	HML2	prototype	chr3	125890459	125899596	+	noncoding	LINC02614,ENPP7P4	lncRNA,transcribed_unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000241288,ENSG00000241278	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_3q21.2	HERV	MER4B	oneside	chr3	126084798	126090891	+	noncoding	SLC41A3,AC079848.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000114544,ENSG00000250012	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
LTR57_3q21.2	HERV	LTR57	internal	chr3	126086940	126087476	+	noncoding	SLC41A3,AC079848.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000114544,ENSG00000250012	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_3q21.2	HERV	HML3	prototype	chr3	126092095	126096888	+	noncoding	SLC41A3,AC079848.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000114544,ENSG00000250012	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
LTR25_3q21.3	HERV	LTR25	internal	chr3	126166134	126170497	+	noncoding	ALDH1L1	protein_coding	ANTISENSE	ENSG00000144908	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_3q21.3	HERV	HUERSP2	prototype	chr3	126243262	126247330	-	noncoding	AC079848.2	lncRNA	ANTISENSE	ENSG00000287232	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_3q21.3a	HERV	HERVH	oneside	chr3	126247331	126248690	+	noncoding	AC079848.2	lncRNA	SENSE	ENSG00000287232	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q21.3a	HERV	ERVLE	internal	chr3	127122155	127124490	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PLXNA1	ENSG00000114554	84763	AC112482.3	ENSG00000287784	41016	None	None
PRIMA41_3q21.3a	HERV	PRIMA41	internal	chr3	127246156	127246956	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC133681.1	ENSG00000286919	27625	RNU6-1047P	ENSG00000201288	5082	None	None
LTR57_3q21.3	HERV	LTR57	internal	chr3	127250672	127251899	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC133681.1	ENSG00000286919	22682	RNU6-1047P	ENSG00000201288	9598	None	None
MER41_3q21.3a	HERV	MER41	prototype	chr3	127397863	127403610	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01471	ENSG00000239921	77080	LINC02016	ENSG00000244215	7193	None	None
HERVIP10F_3q21.3	HERV	HERVIP10F	oneside	chr3	127891790	127895430	+	noncoding	MGLL	protein_coding	ANTISENSE	ENSG00000074416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_3q21.3b	HERV	MER41	internal	chr3	128014435	128015206	+	noncoding	MGLL	protein_coding	ANTISENSE	ENSG00000074416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q21.3b	HERV	ERVLE	internal	chr3	128440297	128442699	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DNAJB8	ENSG00000179407	19740	EEFSEC	ENSG00000132394	31651	None	None
PRIMA41_3q21.3b	HERV	PRIMA41	oneside	chr3	128666873	128670003	+	noncoding	RPN1	protein_coding	ANTISENSE	ENSG00000163902	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3q21.3	HERV	HERVL	oneside	chr3	128825110	128828475	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MARK2P17	ENSG00000244065	15089	RAB7A	ENSG00000075785	10312	None	None
HERVH_3q21.3b	HERV	HERVH	prototype	chr3	128829426	128834942	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MARK2P17	ENSG00000244065	8622	RAB7A	ENSG00000075785	14628	None	None
HERVH_3q21.3c	HERV	HERVH	prototype	chr3	128836083	128842027	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MARK2P17	ENSG00000244065	1537	RAB7A	ENSG00000075785	21285	None	None
HERV3_3q21.3	HERV	HERV3	prototype	chr3	128854524	128860156	-	noncoding	AC112484.3	lncRNA	SENSE	ENSG00000261159	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:128859772-128859783,chr3:128859816-128859817
HML1_3q21.3	HERV	HML1	prototype	chr3	128920573	128924432	+	noncoding	KIAA1257	protein_coding	ANTISENSE	ENSG00000114656	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3q21.3d	HERV	HERVH	prototype	chr3	128959818	128965400	+	noncoding	KIAA1257	protein_coding	ANTISENSE	ENSG00000114656	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3q22.1a	HERV	ERVLB4	oneside	chr3	129896346	129899192	-	noncoding	TMCC1-AS1	lncRNA	ANTISENSE	ENSG00000271270	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_3q22.1	HERV	HML3	prototype	chr3	129901262	129907337	+	noncoding	TMCC1-AS1	lncRNA	SENSE	ENSG00000271270	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3q22.1b	HERV	ERVLB4	internal	chr3	130004788	130005388	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC083906.5	ENSG00000284731	1781	AC083906.2	ENSG00000249869	7794	None	None
HERVE_3q22.1a	HERV	HERVE	internal	chr3	130025902	130029968	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR7E21P	ENSG00000251178	4585	OR7E129P	ENSG00000180770	3382	None	None
HERVH_3q22.1a	HERV	HERVH	prototype	chr3	130059102	130064974	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC083906.4	ENSG00000251610	3182	ALG1L2	ENSG00000251287	16857	None	None
HERVH_3q22.1b	HERV	HERVH	oneside	chr3	130137641	130140911	-	noncoding	LINC02021	lncRNA	ANTISENSE	ENSG00000249846	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_3q22.1b	HERV	HERVE	oneside	chr3	130140912	130149230	-	coding	LINC02021	lncRNA	ANTISENSE	ENSG00000249846	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3q22.1c	HERV	HERVH	oneside	chr3	130149231	130152690	-	noncoding	LINC02021	lncRNA	ANTISENSE	ENSG00000249846	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVS71_3q22.1	HERV	HERVS71	prototype	chr3	130176684	130184114	-	noncoding	LINC02021,AC130888.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000249846,ENSG00000288111	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:130179532-130179547
HERVK11_3q22.1	HERV	HERVK11	prototype	chr3	130443990	130453404	-	coding	COL6A5	protein_coding	ANTISENSE	ENSG00000172752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_3q22.1	HERV	MER101	internal	chr3	131105816	131106247	-	noncoding	NEK11	protein_coding	ANTISENSE	ENSG00000114670	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_3q22.1	HERV	MER34B	oneside	chr3	131106300	131107010	-	noncoding	NEK11	protein_coding	ANTISENSE	ENSG00000114670	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_3q22.1a	HERV	HERVW	oneside	chr3	131196861	131198155	-	noncoding	NEK11	protein_coding	ANTISENSE	ENSG00000114670	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_3q22.1b	HERV	HERVW	internal	chr3	131198227	131199106	-	noncoding	NEK11	protein_coding	ANTISENSE	ENSG00000114670	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3q22.1d	HERV	HERVH	prototype	chr3	131509223	131514208	-	noncoding	AC107027.1	lncRNA	ANTISENSE	ENSG00000248468	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_3q22.1a	HERV	HARLEQUIN	oneside	chr3	132296071	132298144	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ACPP	ENSG00000014257	19225	CPNE4	ENSG00000196353	10661	None	None
HARLEQUIN_3q22.1b	HERV	HARLEQUIN	internal	chr3	132298184	132302714	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ACPP	ENSG00000014257	14655	CPNE4	ENSG00000196353	12774	None	None
HARLEQUIN_3q22.1c	HERV	HARLEQUIN	oneside	chr3	132303682	132310414	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CPNE4	ENSG00000196353	18272	ACPP	ENSG00000014257	6955	None	chr3:132310297-132310307
HERVH_3q22.1e	HERV	HERVH	oneside	chr3	133430513	133434933	+	noncoding	BFSP2,BFSP2-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000170819,ENSG00000249993	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3q22.1	HERV	HERVL	internal	chr3	133489524	133490242	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BFSP2	ENSG00000170819	14302	AC022296.2	ENSG00000214301	582	None	None
ERVL_3q22.1	HERV	ERVL	oneside	chr3	133510368	133514688	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022296.2	ENSG00000214301	18863	AC022296.4	ENSG00000272832	28376	None	None
HARLEQUIN_3q22.2	HERV	HARLEQUIN	oneside	chr3	134020936	134027643	+	noncoding	SLCO2A1	protein_coding	ANTISENSE	ENSG00000174640	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_3q22.2	HERV	MER101	oneside	chr3	134040388	134046893	+	coding	SLCO2A1	protein_coding	ANTISENSE	ENSG00000174640	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q22.2a	HERV	ERVLE	internal	chr3	134421008	134422249	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P13	ENSG00000214288	15356	HMGN1P9	ENSG00000248377	35514	None	None
HERVL40_3q22.2a	HERV	HERVL40	oneside	chr3	135277253	135279417	-	noncoding	AC092969.1	lncRNA	SENSE	ENSG00000240086	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_3q22.2a	HERV	HUERSP1	oneside	chr3	135284875	135287200	-	noncoding	AC092969.1	lncRNA	SENSE	ENSG00000240086	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q22.2b	HERV	ERVLE	internal	chr3	135316613	135320653	-	noncoding	AC092969.1	lncRNA	SENSE	ENSG00000240086	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_3q22.2b	HERV	HUERSP1	oneside	chr3	135512656	135514076	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092969.1	ENSG00000240086	72768	AC092989.1	ENSG00000242222	411815	None	None
ERV316A3_3q22.2a	HERV	ERV316A3	oneside	chr3	135533167	135535008	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092989.1	ENSG00000242222	390883	AC092969.1	ENSG00000240086	93279	None	None
ERV316A3_3q22.2b	HERV	ERV316A3	prototype	chr3	135666871	135668238	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092989.1	ENSG00000242222	257653	AC092969.1	ENSG00000240086	226983	None	None
HERVL40_3q22.2b	HERV	HERVL40	prototype	chr3	135831363	135835812	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092989.1	ENSG00000242222	90079	AC092969.1	ENSG00000240086	391475	None	None
HERVW_3q22.2	HERV	HERVW	oneside	chr3	135935349	135938908	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092989.1	ENSG00000242222	9182	NDUFS6P1	ENSG00000241905	20367	None	None
HERVH_3q22.3a	HERV	HERVH	prototype	chr3	136217439	136223714	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PCCB	ENSG00000114054	26626	AC092991.1	ENSG00000244740	11524	None	None
ERV316A3_3q22.3a	HERV	ERV316A3	prototype	chr3	136233460	136237428	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092991.1	ENSG00000244740	27545	PCCB	ENSG00000114054	12912	None	None
ERVLE_3q22.3a	HERV	ERVLE	internal	chr3	136577192	136579271	+	noncoding	STAG1	protein_coding	ANTISENSE	ENSG00000118007	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q22.3b	HERV	ERV316A3	oneside	chr3	136772226	136773485	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117382.2	ENSG00000261758	16446	AC096992.3	ENSG00000286915	4696	chr3:136773260-136773345	None
ERVLE_3q22.3b	HERV	ERVLE	internal	chr3	136893758	136894683	-	noncoding	NCK1	protein_coding	ANTISENSE	ENSG00000158092	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3q22.3b	HERV	HERVH	prototype	chr3	137595601	137601190	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117440.1	ENSG00000243886	59459	NPM1P17	ENSG00000242070	122584	None	None
ERVLE_3q22.3c	HERV	ERVLE	internal	chr3	137826609	137827292	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007159.1	ENSG00000261146	29931	HSPA8P9	ENSG00000241478	53003	None	None
ERV316A3_3q22.3c	HERV	ERV316A3	prototype	chr3	137937624	137944889	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CLDN18	ENSG00000066405	53846	HSPA8P9	ENSG00000241478	55387	None	None
ERV316A3_3q22.3d	HERV	ERV316A3	oneside	chr3	138137127	138139740	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DBR1	ENSG00000138231	21248	A4GNT	ENSG00000118017	4737	None	None
ERV316A3_3q23a	HERV	ERV316A3	oneside	chr3	139132093	139135827	+	noncoding	MRPS22	protein_coding	SENSE	ENSG00000175110	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q23a	HERV	ERVLE	internal	chr3	140626620	140630460	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC048346.1	ENSG00000249305	6783	TRIM42	ENSG00000155890	47604	None	None
ERVLE_3q23b	HERV	ERVLE	internal	chr3	140779115	140780705	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRIM42	ENSG00000155890	77965	AC121333.1	ENSG00000261826	84370	None	None
ERVLE_3q23c	HERV	ERVLE	internal	chr3	140870908	140872014	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC121333.1	ENSG00000261826	3125	RPL23AP41	ENSG00000224085	30180	None	None
ERVLE_3q23d	HERV	ERVLE	internal	chr3	140879129	140879830	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC121333.1	ENSG00000261826	11346	RPL23AP41	ENSG00000224085	22364	None	None
ERV316A3_3q23b	HERV	ERV316A3	internal	chr3	140999199	141000339	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPSB4	ENSG00000175093	51008	SLC25A36	ENSG00000114120	18204	None	None
HERVH_3q23a	HERV	HERVH	prototype	chr3	141204901	141211729	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPSB4	ENSG00000175093	56290	PXYLP1	ENSG00000155893	16997	None	None
HERVH_3q23b	HERV	HERVH	prototype	chr3	141692184	141696444	-	noncoding	LINC02618	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000242104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH21_3q23	HERV	HERVFH21	prototype	chr3	141696488	141702980	-	noncoding	LINC02618	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000242104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:141698644-141698752	None
HERVW_3q23a	HERV	HERVW	oneside	chr3	141819790	141821513	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRK7	ENSG00000114124	1300	AC112504.3	ENSG00000286822	30036	None	None
MER34B_3q23	HERV	MER34B	oneside	chr3	142242347	142244861	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GK5	ENSG00000175066	16755	XRN1	ENSG00000114127	61746	None	None
HUERSP3B_3q23	HERV	HUERSP3B	unknown	chr3	142278954	142289224	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GK5	ENSG00000175066	53362	XRN1	ENSG00000114127	17383	None	None
HERVW_3q23b	HERV	HERVW	oneside	chr3	142438179	142443654	+	noncoding	XRN1	protein_coding	ANTISENSE	ENSG00000114127	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_3q24a	HERV	LTR25	internal	chr3	143104432	143109993	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	U2SURP	ENSG00000163714	43707	AC018450.2	ENSG00000243733	1809	None	None
MER61_3q24a	HERV	MER61	internal	chr3	143105080	143105917	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	U2SURP	ENSG00000163714	44355	AC018450.2	ENSG00000243733	5885	None	None
ERV316A3_3q24a	HERV	ERV316A3	prototype	chr3	143212373	143215188	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PBX2P1	ENSG00000244171	34756	SLC9A9	ENSG00000181804	50034	None	None
ERVLB4_3q24a	HERV	ERVLB4	oneside	chr3	143256881	143260791	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC9A9	ENSG00000181804	4431	PBX2P1	ENSG00000244171	79264	None	None
HERVH_3q24a	HERV	HERVH	prototype	chr3	143797445	143805925	+	noncoding	SLC9A9	protein_coding	ANTISENSE	ENSG00000181804	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3q24a	HERV	HERVL	oneside	chr3	143920588	143924620	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DIPK2A	ENSG00000181744	47178	AC107421.1	ENSG00000235110	64446	None	None
ERVLE_3q24a	HERV	ERVLE	internal	chr3	144179993	144181431	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	DIPK2A	ENSG00000181744	131274	RNA5SP144	ENSG00000222778	5474	None	None
MER4B_3q24	HERV	MER4B	internal	chr3	144201651	144203105	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011592.1	ENSG00000280397	239106	RNA5SP144	ENSG00000222778	14631	None	None
HERVL_3q24b	HERV	HERVL	prototype	chr3	144204007	144210621	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011592.1	ENSG00000280397	231590	RNA5SP144	ENSG00000222778	16987	None	None
ERV316A3_3q24b	HERV	ERV316A3	oneside	chr3	144244465	144247518	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011592.1	ENSG00000280397	194693	RNA5SP144	ENSG00000222778	57445	None	None
HERVL_3q24c	HERV	HERVL	oneside	chr3	144504509	144506623	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LARP7P4	ENSG00000244024	1016915	AC011592.1	ENSG00000280397	58665	None	None
ERVLB4_3q24b	HERV	ERVLB4	unknown	chr3	145051434	145059339	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011592.1	ENSG00000280397	605590	LARP7P4	ENSG00000244024	464199	chr3:145053751-145053988	chr3:145053751-145053755,chr3:145053762-145053775,chr3:145053778-145053789
HERVH_3q24b	HERV	HERVH	oneside	chr3	145111268	145113190	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LARP7P4	ENSG00000244024	410348	AC011592.1	ENSG00000280397	665424	None	None
HERVH_3q24c	HERV	HERVH	oneside	chr3	145113191	145116899	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011592.1	ENSG00000280397	667347	LARP7P4	ENSG00000244024	406639	None	None
ERV316A3_3q24c	HERV	ERV316A3	internal	chr3	145201382	145202620	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LARP7P4	ENSG00000244024	320918	AC011592.1	ENSG00000280397	755538	None	None
HERVL_3q24d	HERV	HERVL	prototype	chr3	145229481	145231003	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LARP7P4	ENSG00000244024	292535	AC011592.1	ENSG00000280397	783637	None	None
MER61_3q24b	HERV	MER61	oneside	chr3	145244231	145246521	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LARP7P4	ENSG00000244024	277017	AC011592.1	ENSG00000280397	798387	None	None
LTR25_3q24b	HERV	LTR25	internal	chr3	145245399	145247138	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LARP7P4	ENSG00000244024	276400	AC011592.1	ENSG00000280397	799555	None	None
HERVIP10FH_3q24	HERV	HERVIP10FH	oneside	chr3	145357009	145358085	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LARP7P4	ENSG00000244024	165453	AC011592.1	ENSG00000280397	911165	None	None
HERVL_3q24h	HERV	HERVL	insert*	chr3	145514661	145518320	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011592.1	ENSG00000280397	1068817	LARP7P4	ENSG00000244024	5218	None	None
HERVH_3q24d	HERV	HERVH	prototype	chr3	145551229	145556922	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GM2AP1	ENSG00000241695	127650	LARP7P4	ENSG00000244024	26814	None	None
HERVFRD_3q24	HERV	HERVFRD	prototype	chr3	145572604	145579848	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GM2AP1	ENSG00000241695	104724	LARP7P4	ENSG00000244024	48189	chr3:145574324-145574333	None
ERVLE_3q24b	HERV	ERVLE	internal	chr3	145622612	145625150	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LARP7P4	ENSG00000244024	98197	GM2AP1	ENSG00000241695	59422	None	None
ERVLB4_3q24c	HERV	ERVLB4	oneside	chr3	145668001	145670471	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LARP7P4	ENSG00000244024	143586	GM2AP1	ENSG00000241695	14101	None	None
HERVH_3q24e	HERV	HERVH	prototype	chr3	145710495	145716095	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GM2AP1	ENSG00000241695	25403	RPL21P39	ENSG00000239797	108162	None	None
PABLB_3q24a	HERV	PABLB	internal	chr3	145748363	145749833	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GM2AP1	ENSG00000241695	63271	RPL21P39	ENSG00000239797	74424	None	None
PABLB_3q24b	HERV	PABLB	internal	chr3	145750080	145754461	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GM2AP1	ENSG00000241695	64988	RPL21P39	ENSG00000239797	69796	None	None
HERVP71A_3q24	HERV	HERVP71A	prototype	chr3	146333468	146339816	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PLSCR4	ENSG00000114698	82289	AC130509.1	ENSG00000243596	3180	None	None
HERVH_3q24f	HERV	HERVH	prototype	chr3	146353817	146359463	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC130509.1	ENSG00000243596	5337	AC069528.1	ENSG00000241358	31900	None	None
HERVH_3q24g	HERV	HERVH	prototype	chr3	146362086	146367972	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC130509.1	ENSG00000243596	13606	AC069528.1	ENSG00000241358	23391	None	None
MER101_3q24	HERV	MER101	oneside	chr3	146384194	146386388	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC130509.1	ENSG00000243596	35714	AC069528.1	ENSG00000241358	4975	None	None
HERVS71_3q24	HERV	HERVS71	prototype	chr3	146405006	146412157	-	noncoding	AC069528.1,PLSCR2	transcribed_processed_pseudogene,protein_coding	SENSE,SENSE	ENSG00000241358,ENSG00000163746	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q24d	HERV	ERV316A3	oneside	chr3	146630884	146633899	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092957.1	ENSG00000243620	275786	PLSCR5	ENSG00000231213	24668	None	None
ERVLB4_3q24d	HERV	ERVLB4	prototype	chr3	146692728	146698104	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092957.1	ENSG00000243620	211581	PLSCR5	ENSG00000231213	86512	None	None
ERVLE_3q24c	HERV	ERVLE	internal	chr3	146904366	146905980	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092957.1	ENSG00000243620	3705	PLSCR5	ENSG00000231213	298150	None	None
HERVL_3q24e	HERV	HERVL	prototype	chr3	146936983	146940451	+	noncoding	AC092957.1	lncRNA	ANTISENSE	ENSG00000243620	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3q24e	HERV	ERVLB4	oneside	chr3	146969535	146972175	+	noncoding	AC092957.1	lncRNA	ANTISENSE	ENSG00000243620	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_3q24	HERV	ERVL	internal	chr3	146979471	146980933	-	noncoding	AC092957.1	lncRNA	SENSE	ENSG00000243620	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3q24f	HERV	HERVL	prototype	chr3	147719506	147725815	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPM1P28	ENSG00000240804	127671	AC092925.1	ENSG00000239661	118308	None	None
HERVL_3q24g	HERV	HERVL	prototype	chr3	148128358	148135351	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092958.2	ENSG00000241792	1125	AC025566.1	ENSG00000244650	25560	None	None
HERVH_3q24h	HERV	HERVH	prototype	chr3	148151529	148157361	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092958.2	ENSG00000241792	24296	AC025566.1	ENSG00000244650	3550	None	chr3:148151850-148151854
ERVLE_3q24d	HERV	ERVLE	internal	chr3	148278809	148281792	+	noncoding	LINC02045,LINC02046	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000243347,ENSG00000242440	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:148280082-148280086
HERVH_3q24i	HERV	HERVH	prototype	chr3	148414244	148420096	+	noncoding	AC069410.1	lncRNA	ANTISENSE	ENSG00000285557	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q24e	HERV	ERVLE	internal	chr3	148470359	148473886	-	noncoding	AC069410.1	lncRNA	SENSE	ENSG00000285557	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_3q24	HERV	HML2	internal	chr3	148563690	148567609	-	coding	AC069410.1	lncRNA	SENSE	ENSG00000285557	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q24f	HERV	ERVLE	internal	chr3	148600713	148601910	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL38P1	ENSG00000241993	94084	AC069410.1	ENSG00000285557	8786	chr3:148601074-148601302	None
ERVLE_3q24g	HERV	ERVLE	internal	chr3	148663228	148664136	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069410.1	ENSG00000285557	71301	RPL38P1	ENSG00000241993	31858	None	None
MER34B_3q24	HERV	MER34B	oneside	chr3	148805152	148809414	-	noncoding	CPB1	protein_coding	ANTISENSE	ENSG00000153002	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_3q25.1	HERV	HUERSP2	internal	chr3	149294612	149294927	+	noncoding	AC093001.1	lncRNA	SENSE	ENSG00000244468	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_3q25.1a	HERV	HERVW	oneside	chr3	149756462	149758825	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANKUB1	ENSG00000206199	2275	COMMD2	ENSG00000114744	3967	None	None
ERVLE_3q25.1	HERV	ERVLE	internal	chr3	150223745	150225292	+	noncoding	AC117386.1	lncRNA	ANTISENSE	ENSG00000241048	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_3q25.1	HERV	HERVH	oneside	chr3	150600789	150602459	+	noncoding	SERP1	protein_coding	ANTISENSE	ENSG00000120742	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_3q25.1a	HERV	MER4	prototype	chr3	150688528	150694767	+	noncoding	ERICH6	protein_coding	ANTISENSE	ENSG00000163645	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_3q25.1	HERV	HERVL18	prototype	chr3	150825377	150827397	-	noncoding	SIAH2-AS1	lncRNA	ANTISENSE	ENSG00000244265	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_3q25.1b	HERV	HERVW	prototype	chr3	150854256	150861337	+	noncoding	SIAH2-AS1,CLRN1-AS1	lncRNA,lncRNA	SENSE,SENSE	ENSG00000244265,ENSG00000239265	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3q25.1	HERV	HERVL	oneside	chr3	151419191	151421384	-	noncoding	MED12L	protein_coding	ANTISENSE	ENSG00000144893	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_3q25.1	HERV	HERV9	oneside	chr3	151664746	151671281	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AADACL2	ENSG00000197953	62635	LINC02066	ENSG00000241151	6780	None	None
HML3_3q25.1	HERV	HML3	oneside	chr3	151701259	151706723	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02066	ENSG00000241151	43293	AADACL2	ENSG00000197953	27193	None	None
HERVFH21_3q25.1	HERV	HERVFH21	oneside	chr3	151805801	151812286	+	coding	AADACL2-AS1,AC068647.2	lncRNA,transcribed_unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000242908,ENSG00000250271	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_3q25.1b	HERV	MER4	oneside	chr3	152034589	152040439	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108718.1	ENSG00000239941	77734	AADACL2-AS1	ENSG00000242908	106414	None	None
MER4_3q25.1c	HERV	MER4	oneside	chr3	152040473	152042012	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108718.1	ENSG00000239941	76161	AADACL2-AS1	ENSG00000242908	112298	None	None
HERVH_3q25.2a	HERV	HERVH	prototype	chr3	152597016	152603153	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC026347.2	ENSG00000243305	100203	AC092924.1	ENSG00000244545	44993	None	None
ERVLB4_3q25.2a	HERV	ERVLB4	internal	chr3	152685459	152686867	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATP5MGP5	ENSG00000242561	113567	AC092924.2	ENSG00000287706	6009	None	None
HERVH_3q25.2b	HERV	HERVH	prototype	chr3	153226150	153232523	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC078788.1	ENSG00000241220	124584	RN7SL300P	ENSG00000265813	26133	None	None
ERV316A3_3q25.2a	HERV	ERV316A3	oneside	chr3	153351906	153356709	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL300P	ENSG00000265813	151889	AC078788.1	ENSG00000241220	398	None	None
HERVL_3q25.2	HERV	HERVL	oneside	chr3	153472878	153474140	+	noncoding	LINC02006,C3orf79	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000238755,ENSG00000237787	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3q25.2c	HERV	HERVH	oneside	chr3	153825582	153829441	-	noncoding	LINC02006	lncRNA	SENSE	ENSG00000238755	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q25.2b	HERV	ERV316A3	internal	chr3	153904617	153906476	+	noncoding	LINC02006,AC068985.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000238755,ENSG00000243486	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q25.2c	HERV	ERV316A3	oneside	chr3	153906501	153909016	+	noncoding	LINC02006,AC068985.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000238755,ENSG00000243486	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV30_3q25.2	HERV	HERV30	prototype	chr3	154367104	154372532	+	noncoding	GPR149	protein_coding	ANTISENSE	ENSG00000174948	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_3q25.2	HERV	HERVW	oneside	chr3	154978076	154979301	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073359.1	ENSG00000243953	7853	MME	ENSG00000196549	44823	None	None
LTR23_3q25.2	HERV	LTR23	internal	chr3	155029552	155030580	-	noncoding	MME	protein_coding	ANTISENSE	ENSG00000196549	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3q25.2b	HERV	ERVLB4	oneside	chr3	155245126	155247406	+	noncoding	LINC01487	lncRNA	SENSE	ENSG00000241336	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3q25.2c	HERV	ERVLB4	oneside	chr3	155250612	155254841	+	noncoding	LINC01487	lncRNA	SENSE	ENSG00000241336	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3q25.2d	HERV	HERVH	prototype	chr3	155274437	155280798	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STRIT1	ENSG00000240045	9429	LINC01487	ENSG00000241336	15671	chr3:155278144-155278511	None
HERVH_3q25.2e	HERV	HERVH	oneside	chr3	155282777	155284930	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	STRIT1	ENSG00000240045	5297	LINC01487	ENSG00000241336	24011	None	None
MER61_3q25.31	HERV	MER61	oneside	chr3	155324174	155325889	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PABPC1P10	ENSG00000239443	14367	PLCH1	ENSG00000114805	49691	None	None
ERV316A3_3q25.31	HERV	ERV316A3	internal	chr3	155332201	155334090	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PABPC1P10	ENSG00000239443	22394	PLCH1	ENSG00000114805	41490	None	None
ERVLB4_3q25.31a	HERV	ERVLB4	oneside	chr3	155451454	155453110	+	noncoding	PLCH1,PLCH1-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000114805,ENSG00000239508	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3q25.31b	HERV	ERVLB4	internal	chr3	155460332	155462306	+	noncoding	PLCH1	protein_coding	ANTISENSE	ENSG00000114805	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:155462101-155462107
HERVL18_3q25.31	HERV	HERVL18	prototype	chr3	156620366	156626577	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SSR3	ENSG00000114850	65182	TIPARP-AS1	ENSG00000243926	45285	None	None
HERVL_3q25.32	HERV	HERVL	oneside	chr3	157394741	157398992	-	noncoding	VEPH1	protein_coding	SENSE	ENSG00000197415	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q25.32a	HERV	ERV316A3	oneside	chr3	157475517	157478417	+	noncoding	VEPH1	protein_coding	ANTISENSE	ENSG00000197415	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVEA_3q25.32	HERV	HERVEA	prototype	chr3	157579228	157588006	-	coding	SLC66A1L,AC084212.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000174899,ENSG00000286892	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:157583528-157583573
MER4B_3q25.32	HERV	MER4B	internal	chr3	158617544	158621915	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025033.1	ENSG00000243165	4741	MTAPP1	ENSG00000243025	6687	None	None
HERVIP10F_3q25.32	HERV	HERVIP10F	oneside	chr3	158622961	158625639	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025033.1	ENSG00000243165	1017	MTAPP1	ENSG00000243025	12104	None	None
HERVI_3q25.32	HERV	HERVI	oneside	chr3	158625657	158628230	-	noncoding	AC025033.1	processed_pseudogene	SENSE	ENSG00000243165	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q25.32	HERV	ERVLE	internal	chr3	158892606	158896116	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IQCJ-SCHIP1	ENSG00000283154	66119	AC092999.1	ENSG00000279311	20785	None	None
ERV316A3_3q25.32b	HERV	ERV316A3	oneside	chr3	159192378	159193972	-	noncoding	IQCJ-SCHIP1,IQCJ	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000283154,ENSG00000214216	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3q25.33	HERV	HERVL	oneside	chr3	159316147	159319240	-	coding	IQCJ-SCHIP1	protein_coding	ANTISENSE	ENSG00000283154	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_3q25.33a	HERV	MER4B	internal	chr3	160051773	160054533	+	noncoding	IL12A-AS1	lncRNA	ANTISENSE	ENSG00000244040	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_3q25.33b	HERV	MER4B	internal	chr3	160252106	160253964	+	noncoding	AC079594.2	protein_coding	ANTISENSE	ENSG00000248710	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3q25.33	HERV	ERVLB4	internal	chr3	160611156	160612314	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL6P8	ENSG00000242285	25369	ARL14	ENSG00000179674	64846	None	None
ERVLE_3q25.33	HERV	ERVLE	internal	chr3	160703616	160704816	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069224.1	ENSG00000207084	6556	AC069224.2	ENSG00000260572	48612	None	None
MER41_3q26.1a	HERV	MER41	prototype	chr3	161139778	161149489	+	noncoding	NMD3	protein_coding	SENSE	ENSG00000169251	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_3q26.1a	HERV	MER4	oneside	chr3	161180279	161182641	-	noncoding	NMD3	protein_coding	ANTISENSE	ENSG00000169251	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3q26.1a	HERV	HERVH	prototype	chr3	161721915	161727777	-	noncoding	AC112770.1	lncRNA	ANTISENSE	ENSG00000288087	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q26.1a	HERV	ERVLE	internal	chr3	161769754	161774597	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC131211.1	ENSG00000240354	42312	AC112770.1	ENSG00000288087	34355	chr3:161770685-161770901	None
HERV30_3q26.1	HERV	HERV30	prototype	chr3	161845954	161854038	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TOMM22P6	ENSG00000241874	632503	AC131211.1	ENSG00000240354	24046	None	None
HERVEA_3q26.1	HERV	HERVEA	oneside	chr3	161937116	161939117	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC131211.1	ENSG00000240354	115208	TOMM22P6	ENSG00000241874	547424	None	None
HARLEQUIN_3q26.1	HERV	HARLEQUIN	prototype	chr3	162044535	162052725	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TOMM22P6	ENSG00000241874	433816	AC131211.1	ENSG00000240354	222627	None	None
ERVLE_3q26.1b	HERV	ERVLE	internal	chr3	162132993	162134045	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TOMM22P6	ENSG00000241874	352496	AC131211.1	ENSG00000240354	311085	None	None
HERVH_3q26.1b	HERV	HERVH	oneside	chr3	162153421	162159637	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TOMM22P6	ENSG00000241874	326904	AC131211.1	ENSG00000240354	331513	None	None
HERVW_3q26.1a	HERV	HERVW	oneside	chr3	162322679	162328369	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC131211.1	ENSG00000240354	500771	TOMM22P6	ENSG00000241874	158172	None	None
HERV4_3q26.1	HERV	HERV4	internal	chr3	162403059	162405374	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TOMM22P6	ENSG00000241874	81167	AC131211.1	ENSG00000240354	581151	None	None
HUERSP3B_3q26.1	HERV	HUERSP3B	prototype	chr3	162434437	162440353	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TOMM22P6	ENSG00000241874	46188	AC131211.1	ENSG00000240354	612529	None	chr3:162438483-162438485,chr3:162439905-162439920
HUERSP1_3q26.1	HERV	HUERSP1	prototype	chr3	162546999	162554294	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC128716.1	ENSG00000243044	47333	TOMM22P6	ENSG00000241874	60050	None	None
ERVLE_3q26.1c	HERV	ERVLE	internal	chr3	162570093	162571930	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TOMM22P6	ENSG00000241874	83144	AC128716.1	ENSG00000243044	29697	None	None
HERVL_3q26.1a	HERV	HERVL	oneside	chr3	162635173	162638640	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC128685.1	ENSG00000241168	387756	AC128716.1	ENSG00000243044	33381	None	None
MER61_3q26.1a	HERV	MER61	prototype	chr3	162664842	162670648	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC128716.1	ENSG00000243044	63050	AC128685.1	ENSG00000241168	355748	None	None
HERVH_3q26.1c	HERV	HERVH	prototype	chr3	162712460	162718258	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC128716.1	ENSG00000243044	110668	AC128685.1	ENSG00000241168	308138	None	chr3:162712799-162712803,chr3:162718151-162718156
HERVH_3q26.1d	HERV	HERVH	oneside	chr3	162722818	162727229	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC128685.1	ENSG00000241168	299167	AC128716.1	ENSG00000243044	121026	None	None
PRIMA4_3q26.1	HERV	PRIMA4	oneside	chr3	162770616	162774575	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC128716.1	ENSG00000243044	168824	AC128685.1	ENSG00000241168	251821	None	None
ERV316A3_3q26.1a	HERV	ERV316A3	internal	chr3	162801178	162803194	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC128716.1	ENSG00000243044	199386	AC128685.1	ENSG00000241168	223202	None	None
ERVLE_3q26.1d	HERV	ERVLE	internal	chr3	162958698	162960602	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC128685.1	ENSG00000241168	65794	AC128716.1	ENSG00000243044	356906	None	None
ERVLE_3q26.1e	HERV	ERVLE	internal	chr3	162983034	162983534	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC128716.1	ENSG00000243044	381242	AC128685.1	ENSG00000241168	42862	None	None
ERVLE_3q26.1f	HERV	ERVLE	internal	chr3	163031099	163032675	-	noncoding	AC128685.1	lncRNA	ANTISENSE	ENSG00000241168	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_3q26.1	HERV	LTR25	oneside	chr3	163052389	163058861	-	noncoding	AC128685.1	lncRNA	ANTISENSE	ENSG00000241168	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_3q26.1a	HERV	ERVL	internal	chr3	163196736	163198868	+	noncoding	AC128685.1,LINC01192	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000241168,ENSG00000241369	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_3q26.1b	HERV	MER61	prototype	chr3	163324071	163329318	+	noncoding	LINC01192	lncRNA	ANTISENSE	ENSG00000241369	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3q26.1b	HERV	HERVL	prototype	chr3	163423163	163426281	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079910.1	ENSG00000240792	29287	LINC01192	ENSG00000241369	61600	None	None
ERV316A3_3q26.1b	HERV	ERV316A3	oneside	chr3	163507937	163509280	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079910.1	ENSG00000240792	28437	AC084017.1	ENSG00000214210	492326	None	None
ERV316A3_3q26.1c	HERV	ERV316A3	internal	chr3	163532508	163533637	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079910.1	ENSG00000240792	53008	AC084017.1	ENSG00000214210	467969	None	None
HERVL_3q26.1c	HERV	HERVL	prototype	chr3	163637962	163639404	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084017.1	ENSG00000214210	362202	AC079910.1	ENSG00000240792	158462	None	None
HERVW_3q26.1b	HERV	HERVW	prototype	chr3	163694477	163701027	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084017.1	ENSG00000214210	300579	AC079910.1	ENSG00000240792	214977	None	None
HERV9_3q26.1	HERV	HERV9	oneside	chr3	163801602	163807315	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079910.1	ENSG00000240792	322102	AC084017.1	ENSG00000214210	194291	None	None
HERVH_3q26.1e	HERV	HERVH	prototype	chr3	163907530	163913988	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079910.1	ENSG00000240792	428030	AC084017.1	ENSG00000214210	87618	None	None
HERVL_3q26.1d	HERV	HERVL	prototype	chr3	163916202	163918587	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079910.1	ENSG00000240792	436702	AC084017.1	ENSG00000214210	83019	None	None
HERVFRD_3q26.1a	HERV	HERVFRD	oneside	chr3	163923466	163925942	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084017.1	ENSG00000214210	75664	AC079910.1	ENSG00000240792	443966	None	None
HERVFH21_3q26.1	HERV	HERVFH21	prototype	chr3	164017639	164026136	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1263	ENSG00000221251	145335	AC084017.1	ENSG00000214210	15174	chr3:164023257-164023765	None
HERVFRD_3q26.1b	HERV	HERVFRD	prototype	chr3	164141531	164148618	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084017.1	ENSG00000214210	139066	MIR1263	ENSG00000221251	22853	None	None
HML5_3q26.1	HERV	HML5	oneside	chr3	164215607	164220323	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01323	ENSG00000241636	450555	MIR1263	ENSG00000221251	44051	None	None
ERVLB4_3q26.1a	HERV	ERVLB4	internal	chr3	164271712	164273724	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1263	ENSG00000221251	100156	LINC01323	ENSG00000241636	397154	None	None
ERVLB4_3q26.1b	HERV	ERVLB4	oneside	chr3	164283902	164284954	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1263	ENSG00000221251	112346	LINC01323	ENSG00000241636	385924	None	None
MER4_3q26.1b	HERV	MER4	oneside	chr3	164326710	164330202	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01323	ENSG00000241636	340676	MIR1263	ENSG00000221251	155154	None	chr3:164327246-164327249
MER4_3q26.1c	HERV	MER4	internal	chr3	164330279	164333945	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01323	ENSG00000241636	336933	MIR1263	ENSG00000221251	158723	None	chr3:164331509-164331513
HUERSP2_3q26.1a	HERV	HUERSP2	oneside	chr3	164332142	164333833	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01323	ENSG00000241636	337045	MIR1263	ENSG00000221251	160586	None	None
HERVS71_3q26.1	HERV	HERVS71	prototype	chr3	164334009	164341897	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01323	ENSG00000241636	328981	MIR1263	ENSG00000221251	162453	chr3:164339559-164339879	chr3:164341239-164341250,chr3:164341260-164341265,chr3:164341488-164341490,chr3:164341234-164341237
HERVH_3q26.1f	HERV	HERVH	prototype	chr3	164342181	164347849	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01323	ENSG00000241636	323029	MIR1263	ENSG00000221251	170625	None	None
MER4_3q26.1d	HERV	MER4	oneside	chr3	164347871	164349294	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01323	ENSG00000241636	321584	MIR1263	ENSG00000221251	176315	None	None
MER4_3q26.1e	HERV	MER4	prototype	chr3	164465468	164469980	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1263	ENSG00000221251	293912	LINC01323	ENSG00000241636	200898	None	None
ERVLE_3q26.1g	HERV	ERVLE	internal	chr3	164525052	164526566	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01323	ENSG00000241636	144312	MIR1263	ENSG00000221251	353496	None	None
ERV316A3_3q26.1d	HERV	ERV316A3	internal	chr3	164541991	164543514	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1263	ENSG00000221251	370435	LINC01323	ENSG00000241636	127364	None	None
MER34B_3q26.1	HERV	MER34B	internal	chr3	164626954	164628462	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1263	ENSG00000221251	455398	LINC01323	ENSG00000241636	42416	None	None
MER41_3q26.1b	HERV	MER41	internal	chr3	164951685	164952565	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01324	ENSG00000241767	120205	SI	ENSG00000090402	26333	None	None
MER101_3q26.1	HERV	MER101	oneside	chr3	165242566	165246773	-	noncoding	LINC01322	lncRNA	ANTISENSE	ENSG00000244128	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3q26.1e	HERV	HERVL	oneside	chr3	165530215	165532275	-	noncoding	LINC01322	lncRNA	ANTISENSE	ENSG00000244128	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11D_3q26.1	HERV	HERVK11D	prototype	chr3	165546697	165548895	+	noncoding	LINC01322	lncRNA	SENSE	ENSG00000244128	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_3q26.1b	HERV	HUERSP2	internal	chr3	165713823	165714240	-	noncoding	LINC01322	lncRNA	ANTISENSE	ENSG00000244128	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_3q26.1b	HERV	ERVL	prototype	chr3	165740633	165744816	+	noncoding	LINC01322	lncRNA	SENSE	ENSG00000244128	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q26.1e	HERV	ERV316A3	internal	chr3	165950308	165952219	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTND4P17	ENSG00000242178	207802	LINC01322	ENSG00000244128	103789	None	None
HERVL_3q26.1f	HERV	HERVL	prototype	chr3	165997809	166003219	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTND4P17	ENSG00000242178	156802	LINC01322	ENSG00000244128	151290	None	None
ERVLE_3q26.1h	HERV	ERVLE	internal	chr3	166173625	166174423	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MCUR1P2	ENSG00000242326	6890	MTCO3P38	ENSG00000242456	11657	None	None
HERVL_3q26.1g	HERV	HERVL	prototype	chr3	166347356	166353485	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01326	ENSG00000244321	216208	AC104629.1	ENSG00000244429	53003	None	None
ERV316A3_3q26.1f	HERV	ERV316A3	internal	chr3	166408782	166409944	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01326	ENSG00000244321	159749	AC104629.1	ENSG00000244429	114429	None	None
ERVL_3q26.1c	HERV	ERVL	internal	chr3	166466567	166469506	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104629.1	ENSG00000244429	172214	LINC01326	ENSG00000244321	100187	None	None
HERVH_3q26.1g	HERV	HERVH	prototype	chr3	166500605	166506418	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01326	ENSG00000244321	63275	AC104629.1	ENSG00000244429	206252	None	None
ERV316A3_3q26.1g	HERV	ERV316A3	internal	chr3	166549600	166554725	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01326	ENSG00000244321	14968	AC104629.1	ENSG00000244429	255247	None	None
ERV316A3_3q26.1h	HERV	ERV316A3	oneside	chr3	166703835	166705126	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC072046.1	ENSG00000240458	16332	PSAT1P4	ENSG00000224962	12123	None	None
HERVH_3q26.1h	HERV	HERVH	prototype	chr3	166822581	166829713	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069439.2	ENSG00000240033	5308	CBX1P5	ENSG00000231516	11014	None	None
HERVL_3q26.1h	HERV	HERVL	prototype	chr3	166886803	166889941	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP74	ENSG00000220343	175890	AC069439.1	ENSG00000239227	24693	None	None
HERVL_3q26.1i	HERV	HERVL	prototype	chr3	166987952	166990625	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP74	ENSG00000220343	75206	AC069439.1	ENSG00000239227	125842	None	None
HUERSP2_3q26.1c	HERV	HUERSP2	oneside	chr3	166994414	166995592	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP74	ENSG00000220343	70239	AC069439.1	ENSG00000239227	132304	None	None
HUERSP2_3q26.1d	HERV	HUERSP2	oneside	chr3	167000001	167002931	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP74	ENSG00000220343	62900	AC069439.1	ENSG00000239227	137891	None	None
HERVL40_3q26.1	HERV	HERVL40	oneside	chr3	167101461	167103323	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP74	ENSG00000220343	35141	ZBBX	ENSG00000169064	136964	None	None
HML3_3q26.1a	HERV	HML3	oneside	chr3	167176901	167182593	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZBBX	ENSG00000169064	57694	PPIAP74	ENSG00000220343	110581	None	None
HML3_3q26.1b	HERV	HML3	oneside	chr3	167182651	167183906	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZBBX	ENSG00000169064	56381	PPIAP74	ENSG00000220343	116331	None	None
HUERSP2_3q26.1e	HERV	HUERSP2	prototype	chr3	167246985	167251569	+	noncoding	ZBBX	protein_coding	ANTISENSE	ENSG00000169064	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_3q26.1	HERV	HERVIP10F	prototype	chr3	167266302	167275022	+	coding	ZBBX	protein_coding	ANTISENSE	ENSG00000169064	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q26.1i	HERV	ERVLE	internal	chr3	167324426	167325120	-	noncoding	ZBBX	protein_coding	SENSE	ENSG00000169064	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3q26.1i	HERV	HERVH	prototype	chr3	167422393	167431175	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01327	ENSG00000241669	13874	SERPINI2	ENSG00000114204	10614	None	None
HERVH_3q26.1j	HERV	HERVH	prototype	chr3	167431286	167437130	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01327	ENSG00000241669	22767	SERPINI2	ENSG00000114204	4659	None	None
ERV316A3_3q26.2a	HERV	ERV316A3	internal	chr3	167991271	167992379	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GOLIM4	ENSG00000173905	16310	HMGN2P26	ENSG00000241203	32189	None	None
ERVLB4_3q26.2a	HERV	ERVLB4	prototype	chr3	168107756	168112455	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EGFEM1P	ENSG00000206120	137067	GOLIM4	ENSG00000173905	11832	None	None
ERVLB4_3q26.2b	HERV	ERVLB4	oneside	chr3	168514124	168515453	-	noncoding	EGFEM1P	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000206120	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3q26.2a	HERV	HERVH	prototype	chr3	168930920	168933315	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01997	ENSG00000241383	69707	AC092954.2	ENSG00000273177	2322	None	None
ERV316A3_3q26.2b	HERV	ERV316A3	prototype	chr3	169058099	169063587	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01997	ENSG00000241383	19683	MECOM	ENSG00000085276	19912	None	None
HML5_3q26.2	HERV	HML5	prototype	chr3	170077412	170079290	+	noncoding	GPR160	protein_coding	SENSE	ENSG00000173890	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_3q26.2	HERV	HUERSP1	internal	chr3	170316558	170319856	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073288.1	ENSG00000239628	25822	PRKCI	ENSG00000163558	10581	None	None
PABLA_3q26.2	HERV	PABLA	internal	chr3	170335463	170342401	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073288.1	ENSG00000239628	3277	PRKCI	ENSG00000163558	29486	None	None
HERVH_3q26.2b	HERV	HERVH	prototype	chr3	170672177	170678262	-	noncoding	AC026316.4,SLC7A14-AS1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000285218,ENSG00000285051	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3q26.2c	HERV	HERVH	prototype	chr3	170681758	170689306	-	noncoding	AC026316.4,SLC7A14-AS1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000285218,ENSG00000285051	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3q26.2d	HERV	HERVH	prototype	chr3	170817615	170823761	-	noncoding	AC026316.4,SLC7A14-AS1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000285218,ENSG00000285051	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:170820037-170820046,chr3:170823370-170823398
HML4_3q26.2	HERV	HML4	oneside	chr3	170858678	170861080	+	noncoding	AC026316.4,SLC7A14-AS1	protein_coding,lncRNA	SENSE,SENSE	ENSG00000285218,ENSG00000285051	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q26.2	HERV	ERVLE	internal	chr3	170901934	170903659	+	noncoding	EIF5A2	protein_coding	ANTISENSE	ENSG00000163577	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3q26.31a	HERV	ERVLB4	unknown	chr3	171530290	171538018	-	noncoding	AC008134.1	processed_pseudogene	ANTISENSE	ENSG00000234594	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_3q26.31a	HERV	HERVH	prototype	chr3	171576684	171582157	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008134.1	ENSG00000234594	42069	PLD1	ENSG00000075651	18247	None	None
MER4B_3q26.31	HERV	MER4B	internal	chr3	171854841	171857227	+	noncoding	TMEM212-AS1,TMEM212	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000234717,ENSG00000186329	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3q26.31b	HERV	ERVLB4	internal	chr3	172021123	172021928	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC055714.1	ENSG00000287899	24252	FNDC3B	ENSG00000075420	17650	None	None
LTR23_3q26.31	HERV	LTR23	internal	chr3	172026012	172028823	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	FNDC3B	ENSG00000075420	10755	AC055714.1	ENSG00000287899	29141	None	None
ERV316A3_3q26.31	HERV	ERV316A3	oneside	chr3	172550393	172552486	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02068	ENSG00000223387	8402	TNFSF10	ENSG00000121858	26918	None	None
HUERSP3B_3q26.31a	HERV	HUERSP3B	oneside	chr3	172666117	172668316	+	noncoding	NCEH1	protein_coding	ANTISENSE	ENSG00000144959	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:172666456-172666460
HUERSP3B_3q26.31b	HERV	HUERSP3B	internal	chr3	172672365	172674983	+	noncoding	NCEH1	protein_coding	ANTISENSE	ENSG00000144959	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_3q26.31a	HERV	HML1	oneside	chr3	172719014	172720560	+	coding	AC108667.3	lncRNA	SENSE	ENSG00000287012	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_3q26.31	HERV	HERVW	internal	chr3	172720804	172723487	+	noncoding	AC108667.3	lncRNA	SENSE	ENSG00000287012	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_3q26.31b	HERV	HML1	oneside	chr3	172723488	172724743	+	noncoding	AC108667.3	lncRNA	SENSE	ENSG00000287012	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER101_3q26.31	HERV	MER101	internal	chr3	172795345	172800133	+	noncoding	ECT2,RNU4-4P	protein_coding,snRNA	SENSE,ANTISENSE	ENSG00000114346,ENSG00000201458	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:172796560-172796561
HERVH_3q26.31b	HERV	HERVH	prototype	chr3	173155218	173161544	-	noncoding	AC068759.1	lncRNA	ANTISENSE	ENSG00000237473	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_3q26.31	HERV	HUERSP1	oneside	chr3	173245627	173249941	-	noncoding	AC068759.1	lncRNA	ANTISENSE	ENSG00000237473	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH48_3q26.31	HERV	HERVH48	prototype	chr3	173274055	173281973	+	noncoding	AC068759.1	lncRNA	SENSE	ENSG00000237473	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3q26.31c	HERV	ERVLB4	oneside	chr3	173536700	173540495	-	noncoding	NLGN1	protein_coding	ANTISENSE	ENSG00000169760	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:173538886-173538888
HERVL_3q26.31a	HERV	HERVL	prototype	chr3	174395588	174397705	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069218.1	ENSG00000213169	17583	NAALADL2	ENSG00000177694	40868	None	None
ERVLE_3q26.31a	HERV	ERVLE	internal	chr3	174416345	174419014	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NAALADL2	ENSG00000177694	19559	AC069218.1	ENSG00000213169	38340	None	None
ERVLB4_3q26.31d	HERV	ERVLB4	internal	chr3	174428401	174429610	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069218.1	ENSG00000213169	50396	NAALADL2	ENSG00000177694	8963	None	None
HERVL_3q26.31b	HERV	HERVL	prototype	chr3	174882919	174886520	-	noncoding	NAALADL2	protein_coding	ANTISENSE	ENSG00000177694	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_3q26.31	HERV	HML3	prototype	chr3	175051904	175057019	-	noncoding	NAALADL2	protein_coding	ANTISENSE	ENSG00000177694	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3q26.31c	HERV	HERVL	prototype	chr3	175528123	175534485	-	coding	NAALADL2	protein_coding	ANTISENSE	ENSG00000177694	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3q26.31c	HERV	HERVH	prototype	chr3	175827485	175836221	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NAALADL2	ENSG00000177694	16937	AC104640.1	ENSG00000260217	102708	None	None
ERVLE_3q26.31b	HERV	ERVLE	internal	chr3	175845687	175850610	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104640.1	ENSG00000260217	88319	NAALADL2	ENSG00000177694	35139	None	None
HERVH_3q26.32a	HERV	HERVH	prototype	chr3	176061364	176066982	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ACTG1P23	ENSG00000230362	82794	EI24P1	ENSG00000236357	1060	None	chr3:176061660-176061661
ERV316A3_3q26.32	HERV	ERV316A3	oneside	chr3	176142121	176145282	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01208	ENSG00000223715	270157	AC117434.1	ENSG00000238026	27584	None	None
HERVH_3q26.32b	HERV	HERVH	prototype	chr3	176321619	176327363	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01208	ENSG00000223715	88076	AC117434.1	ENSG00000238026	207082	None	chr3:176327058-176327066
HUERSP3_3q26.32	HERV	HUERSP3	prototype	chr3	176505793	176515706	-	noncoding	LINC01208,MIR7977	lncRNA,miRNA	SENSE,ANTISENSE	ENSG00000223715,ENSG00000283333	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_3q26.32	HERV	HUERSP1	internal	chr3	176821132	176823885	-	noncoding	LINC01208	lncRNA	SENSE	ENSG00000223715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q26.32a	HERV	ERVLE	internal	chr3	177267056	177268447	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00501	ENSG00000203645	25995	TBL1XR1	ENSG00000177565	39056	None	None
ERVLE_3q26.32b	HERV	ERVLE	internal	chr3	177324447	177328850	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117465.1	ENSG00000226782	8778	LINC00501	ENSG00000203645	1029	None	None
HERVH_3q26.32c	HERV	HERVH	prototype	chr3	177665834	177671132	-	noncoding	LINC00578	lncRNA	ANTISENSE	ENSG00000228221	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_3q26.32a	HERV	HERVL40	internal	chr3	177948638	177951612	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007953.2	ENSG00000270321	715	AC007953.1	ENSG00000225790	8339	None	None
MER101_3q26.32	HERV	MER101	internal	chr3	178050183	178053655	+	noncoding	AC110992.1	lncRNA	ANTISENSE	ENSG00000286003	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3q26.32d	HERV	HERVH	prototype	chr3	178207403	178214658	+	noncoding	AC117453.1	lncRNA	ANTISENSE	ENSG00000223930	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_3q26.32	HERV	ERVL	internal	chr3	178856092	178858125	+	noncoding	KCNMB2-AS1	lncRNA	ANTISENSE	ENSG00000237978	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_3q26.32	HERV	HERVW	prototype	chr3	179054591	179060155	+	noncoding	ZMAT3	protein_coding	ANTISENSE	ENSG00000172667	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_3q26.32b	HERV	HERVL40	oneside	chr3	179297321	179298854	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCNMB3	ENSG00000171121	30319	ZNF639	ENSG00000121864	24177	None	None
HERVH_3q26.33a	HERV	HERVH	oneside	chr3	179515305	179517068	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ACTL6A	ENSG00000136518	45818	MTHFD2P7	ENSG00000181260	49977	None	None
HERVH_3q26.33b	HERV	HERVH	prototype	chr3	179517069	179522482	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTHFD2P7	ENSG00000181260	51741	ACTL6A	ENSG00000136518	40404	None	None
HERVH_3q26.33c	HERV	HERVH	oneside	chr3	179522486	179526348	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ACTL6A	ENSG00000136518	36538	MTHFD2P7	ENSG00000181260	57158	None	None
HERVL_3q26.33	HERV	HERVL	prototype	chr3	179994615	180001424	+	noncoding	PEX5L,AC092939.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000114757,ENSG00000287645	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q26.33	HERV	ERV316A3	oneside	chr3	180172482	180173569	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC134503.1	ENSG00000282327	27590	RNA5SP149	ENSG00000201822	10505	None	None
MER61_3q26.33a	HERV	MER61	prototype	chr3	180227547	180235941	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP36	ENSG00000213158	14439	AC068760.1	ENSG00000239880	87166	None	None
ERVLB4_3q26.33a	HERV	ERVLB4	oneside	chr3	180402647	180404488	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068760.1	ENSG00000239880	77588	LINC02053	ENSG00000241696	8520	None	None
LTR57_3q26.33	HERV	LTR57	prototype	chr3	180548134	180553900	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC125618.1	ENSG00000201810	5298	AC125618.2	ENSG00000239774	12818	None	None
HUERSP2_3q26.33	HERV	HUERSP2	prototype	chr3	180868025	180870678	-	noncoding	CCDC39,AC108734.4,FXR1	lncRNA,lncRNA,protein_coding	SENSE,SENSE,ANTISENSE	ENSG00000145075,ENSG00000285336,ENSG00000114416	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:180868149-180868193,chr3:180868748-180868762,chr3:180870515-180870522
MER61_3q26.33b	HERV	MER61	prototype	chr3	180894470	180900477	+	noncoding	FXR1	protein_coding	SENSE	ENSG00000114416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3q26.33b	HERV	ERVLB4	oneside	chr3	182417327	182422085	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084211.1	ENSG00000242012	49071	LINC01994	ENSG00000241098	24885	None	None
ERVLE_3q26.33	HERV	ERVLE	internal	chr3	182467073	182471636	+	noncoding	LINC01994	lncRNA	ANTISENSE	ENSG00000241098	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
LTR25_3q26.33a	HERV	LTR25	internal	chr3	182716415	182725114	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC083801.2	ENSG00000260377	14555	AC083801.1	ENSG00000243378	24130	chr3:182723956-182723968	None
LTR25_3q26.33b	HERV	LTR25	internal	chr3	182725315	182726346	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC083801.2	ENSG00000260377	13323	AC083801.1	ENSG00000243378	33030	None	None
MER41_3q27.1	HERV	MER41	prototype	chr3	183063570	183068598	+	coding	MCCC1	protein_coding	ANTISENSE	ENSG00000078070	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q27.1a	HERV	ERV316A3	oneside	chr3	183114642	183118015	-	noncoding	MCCC1	protein_coding	SENSE	ENSG00000078070	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:183116158-183116202
ERVLE_3q27.1a	HERV	ERVLE	internal	chr3	183188242	183189245	-	noncoding	MCF2L2	protein_coding	SENSE	ENSG00000053524	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3q27.1	HERV	HERVL	internal	chr3	183243288	183244200	-	noncoding	MCF2L2	protein_coding	SENSE	ENSG00000053524	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3q27.1a	HERV	ERVLB4	internal	chr3	183435040	183439428	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MCF2L2	ENSG00000053524	6262	LINC00888	ENSG00000240024	8180	None	None
ERVLE_3q27.1b	HERV	ERVLE	internal	chr3	184073453	184074072	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HTR3C2P	ENSG00000233576	2707	HTR3C	ENSG00000178084	12780	None	None
ERVLB4_3q27.1b	HERV	ERVLB4	internal	chr3	184448915	184453632	-	noncoding	LINC02054	lncRNA	ANTISENSE	ENSG00000224153	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q27.1b	HERV	ERV316A3	oneside	chr3	184464071	184466203	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC128714.1	ENSG00000283625	33281	LINC02054	ENSG00000224153	6180	None	None
ERV316A3_3q27.1c	HERV	ERV316A3	internal	chr3	184541323	184542173	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01840	ENSG00000230215	4541	LINC01839	ENSG00000227509	32924	None	None
HUERSP1_3q27.1	HERV	HUERSP1	prototype	chr3	184699400	184707256	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAGEF1	ENSG00000177383	3108	EPHB3	ENSG00000182580	116992	None	None
HML3_3q27.2a	HERV	HML3	prototype	chr3	185012756	185019807	-	coding	VPS8	protein_coding	ANTISENSE	ENSG00000156931	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_3q27.2b	HERV	HML3	prototype	chr3	185105203	185111049	+	noncoding	C3orf70	protein_coding	ANTISENSE	ENSG00000187068	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q27.2	HERV	ERV316A3	internal	chr3	185182260	185183401	+	noncoding	EHHADH-AS1	lncRNA	SENSE	ENSG00000223358	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER101_3q27.2	HERV	MER101	internal	chr3	185262644	185265712	+	noncoding	EHHADH	protein_coding	ANTISENSE	ENSG00000113790	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3q27.2	HERV	HERVH	prototype	chr3	185373849	185379707	-	noncoding	MAP3K13	protein_coding	ANTISENSE	ENSG00000073803	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_3q27.2	HERV	HML2	prototype	chr3	185562548	185571727	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SENP2	ENSG00000163904	10769	LIPH	ENSG00000163898	9960	None	None
ERVLE_3q27.2	HERV	ERVLE	internal	chr3	185873385	185875201	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGF2BP2	ENSG00000073792	48329	TRA2B	ENSG00000136527	39357	None	None
ERV316A3_3q27.3a	HERV	ERV316A3	oneside	chr3	186447266	186448335	-	noncoding	LINC02020	lncRNA	ANTISENSE	ENSG00000234548	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q27.3b	HERV	ERV316A3	oneside	chr3	186463443	186465796	+	noncoding	LINC02052	lncRNA	ANTISENSE	ENSG00000224406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3q27.3a	HERV	HERVH	prototype	chr3	186657774	186663690	+	noncoding	AC068631.1,HRG	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000197099,ENSG00000113905	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q27.3c	HERV	ERV316A3	internal	chr3	186813953	186814516	+	noncoding	AC112907.1,LINC02043	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000231724,ENSG00000232233	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:186814342-186814520	None
ERV316A3_3q27.3d	HERV	ERV316A3	prototype	chr3	187106849	187110529	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL39L	ENSG00000163923	10419	ST6GAL1	ENSG00000073849	28296	None	None
HERVH_3q27.3b	HERV	HERVH	prototype	chr3	187175504	187181262	-	noncoding	RPL39L	protein_coding	SENSE	ENSG00000163923	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q27.3e	HERV	ERV316A3	oneside	chr3	187374111	187378966	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068299.2	ENSG00000280270	4135	RTP4	ENSG00000136514	2035	None	None
HERVH_3q27.3c	HERV	HERVH	prototype	chr3	187466299	187472000	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SST	ENSG00000157005	196912	LINC02041	ENSG00000228952	16849	None	None
MER4_3q27.3	HERV	MER4	oneside	chr3	187472001	187477404	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02041	ENSG00000228952	22551	SST	ENSG00000157005	191508	None	None
ERVLE_3q27.3	HERV	ERVLE	internal	chr3	187658201	187661969	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02041	ENSG00000228952	208751	SST	ENSG00000157005	6943	None	None
ERVLE_3q28e	HERV	ERVLE	insert*	chr3	189326490	189329355	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TPRG1	ENSG00000188001	1186	TP63	ENSG00000073282	302034	None	None
ERV316A3_3q28a	HERV	ERV316A3	internal	chr3	189438050	189439235	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TPRG1	ENSG00000188001	112746	TP63	ENSG00000073282	192154	None	None
ERV316A3_3q28b	HERV	ERV316A3	oneside	chr3	189577410	189579603	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TPRG1	ENSG00000188001	252106	TP63	ENSG00000073282	51786	None	None
ERV316A3_3q28c	HERV	ERV316A3	oneside	chr3	189615562	189620816	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TP63	ENSG00000073282	10573	TPRG1	ENSG00000188001	290258	None	None
HERVH_3q28a	HERV	HERVH	prototype	chr3	190144600	190150202	+	noncoding	P3H2-AS1	lncRNA	SENSE	ENSG00000225764	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:190145524-190145528
ERVLE_3q28a	HERV	ERVLE	internal	chr3	190217125	190218206	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CLDN1	ENSG00000163347	87501	NMNAT1P3	ENSG00000238077	49474	None	None
HERVL_3q28a	HERV	HERVL	oneside	chr3	190249382	190251109	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CLDN1	ENSG00000163347	54598	NMNAT1P3	ENSG00000238077	81731	None	None
ERV316A3_3q28d	HERV	ERV316A3	prototype	chr3	190335732	190339270	+	noncoding	CLDN16	protein_coding	SENSE	ENSG00000113946	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3q28e	HERV	ERV316A3	oneside	chr3	190363714	190366901	-	noncoding	CLDN16	protein_coding	ANTISENSE	ENSG00000113946	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_3q28	HERV	MER61	prototype	chr3	190549018	190554482	-	noncoding	IL1RAP	protein_coding	ANTISENSE	ENSG00000196083	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_3q28a	HERV	HUERSP3B	oneside	chr3	190678311	190680723	+	noncoding	LINC02013	lncRNA	ANTISENSE	ENSG00000228730	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_3q28b	HERV	HUERSP3B	oneside	chr3	190681070	190685007	+	noncoding	LINC02013	lncRNA	ANTISENSE	ENSG00000228730	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3q28a	HERV	ERVLB4	internal	chr3	190736544	190738951	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092952.1	ENSG00000214147	92014	CCT6P4	ENSG00000232610	20145	None	None
ERV316A3_3q28f	HERV	ERV316A3	oneside	chr3	190836085	190837756	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092952.1	ENSG00000214147	3912	GMNC	ENSG00000205835	14981	None	None
HERVH_3q28b	HERV	HERVH	prototype	chr3	190920164	190925860	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GMNC	ENSG00000205835	27735	OSTN	ENSG00000188729	273381	None	None
ERV316A3_3q28g	HERV	ERV316A3	oneside	chr3	190970855	190972349	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OSTN	ENSG00000188729	226892	GMNC	ENSG00000205835	78426	None	None
PRIMA41_3q28	HERV	PRIMA41	internal	chr3	190991226	190994578	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OSTN	ENSG00000188729	204663	GMNC	ENSG00000205835	98797	None	None
ERV316A3_3q28h	HERV	ERV316A3	internal	chr3	191019110	191019669	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OSTN	ENSG00000188729	179572	GMNC	ENSG00000205835	126681	None	None
ERVLB4_3q28b	HERV	ERVLB4	internal	chr3	191025774	191029918	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OSTN	ENSG00000188729	169323	GMNC	ENSG00000205835	133345	None	None
HERVL_3q28b	HERV	HERVL	internal	chr3	191308281	191311395	-	noncoding	UTS2B	protein_coding	SENSE	ENSG00000188958	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_3q28	HERV	MER41	oneside	chr3	191449204	191450791	-	noncoding	AC073365.1	lncRNA	ANTISENSE	ENSG00000223812	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q28b	HERV	ERVLE	prototype	chr3	191555820	191557587	+	noncoding	AC073365.1	lncRNA	SENSE	ENSG00000223812	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVW_3q28	HERV	HERVW	prototype	chr3	191658784	191665592	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC072023.1	ENSG00000201860	17547	AC026320.2	ENSG00000237653	286757	None	None
HERVH_3q28c	HERV	HERVH	prototype	chr3	191666260	191672378	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026320.2	ENSG00000237653	279971	AC072023.1	ENSG00000201860	25023	None	None
HERVP71A_3q28	HERV	HERVP71A	prototype	chr3	191738212	191744172	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026320.2	ENSG00000237653	208177	AC072023.1	ENSG00000201860	96975	None	None
ERVLE_3q28c	HERV	ERVLE	oneside	chr3	191770257	191772815	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026320.2	ENSG00000237653	179534	AC072023.1	ENSG00000201860	129020	None	None
ERVLE_3q28d	HERV	ERVLE	internal	chr3	191775484	191776254	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026320.2	ENSG00000237653	176095	AC072023.1	ENSG00000201860	134247	None	None
ERV316A3_3q28i	HERV	ERV316A3	internal	chr3	191776254	191776777	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026320.2	ENSG00000237653	175572	AC072023.1	ENSG00000201860	135017	None	None
HERVH_3q28d	HERV	HERVH	prototype	chr3	191895384	191901110	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026320.2	ENSG00000237653	51239	AC072023.1	ENSG00000201860	254147	None	None
HERVH_3q28e	HERV	HERVH	prototype	chr3	192071109	192076858	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026320.3	ENSG00000287178	2092	AC026320.1	ENSG00000232353	34552	None	None
HERVH_3q29	HERV	HERVH	prototype	chr3	192995645	193001388	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MB21D2	ENSG00000180611	77789	AC092966.1	ENSG00000232130	143076	None	None
ERVLE_3q29a	HERV	ERVLE	prototype	chr3	193854861	193859010	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02038	ENSG00000229155	10837	LINC02026	ENSG00000214146	98362	None	None
HERVL_3q29	HERV	HERVL	oneside	chr3	193922960	193928783	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02038	ENSG00000229155	78936	LINC02026	ENSG00000214146	28589	None	None
ERVLB4_3q29a	HERV	ERVLB4	oneside	chr3	194565602	194567149	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM44-AS1	ENSG00000231770	16855	RPL23AP93	ENSG00000232873	1601	None	None
MER4_3q29a	HERV	MER4	unknown	chr3	195602561	195612034	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	APOD	ENSG00000189058	18528	MUC20P1	ENSG00000224769	2913	None	None
MER4_3q29b	HERV	MER4	oneside	chr3	195717357	195718895	+	noncoding	MUC20-OT1	lncRNA	SENSE	ENSG00000242086	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_3q29c	HERV	MER4	internal	chr3	195718906	195720473	+	noncoding	MUC20-OT1	lncRNA	SENSE	ENSG00000242086	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_3q29	HERV	HUERSP3	oneside	chr3	196517830	196525490	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SMCO1	ENSG00000214097	2484	AC092933.1	ENSG00000213358	1849	None	None
HERVIP10F_3q29	HERV	HERVIP10F	prototype	chr3	197242966	197248696	-	noncoding	DLG1	protein_coding	SENSE	ENSG00000075711	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_3q29	HERV	HERVIP10FH	oneside	chr3	197242966	197244546	-	noncoding	DLG1	protein_coding	SENSE	ENSG00000075711	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_3q29d	HERV	MER4	oneside	chr3	197560702	197562205	+	noncoding	BDH1	protein_coding	ANTISENSE	ENSG00000161267	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_3q29e	HERV	MER4	oneside	chr3	197562225	197567719	+	noncoding	BDH1	protein_coding	ANTISENSE	ENSG00000161267	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3q29b	HERV	ERVLB4	oneside	chr3	197573828	197574968	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BDH1	ENSG00000161267	505	AC132008.2	ENSG00000214135	3245	None	None
ERV316A3_3q29	HERV	ERV316A3	internal	chr3	197591652	197592530	-	noncoding	AC132008.2	transcribed_unprocessed_pseudogene	SENSE	ENSG00000214135	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_3q29f	HERV	MER4	oneside	chr3	197614001	197617792	-	noncoding	AC132008.2	transcribed_unprocessed_pseudogene	SENSE	ENSG00000214135	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3q29b	HERV	ERVLE	internal	chr3	197906522	197909169	-	noncoding	IQCG	protein_coding	SENSE	ENSG00000114473	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_3q29	HERV	PRIMA41	internal	chr3	198118453	198119647	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FRG2FP	ENSG00000232783	6575	TUBB8P8	ENSG00000213113	74	None	None
MER61_4p16.3	HERV	MER61	prototype	chr4	94966	101337	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF595	ENSG00000272602	6758	AC253576.1	ENSG00000250238	4622	None	None
HERV4_4p16.3	HERV	HERV4	internal	chr4	174515	175475	+	noncoding	ZNF718	protein_coding	SENSE	ENSG00000250312	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_4p16.3	HERV	HERVW	prototype	chr4	191763	197016	-	noncoding	ZNF718	protein_coding	ANTISENSE	ENSG00000250312	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_4p16.3a	HERV	HML2	oneside	chr4	241200	245565	+	noncoding	ZNF876P	transcribed_unprocessed_pseudogene	SENSE	ENSG00000198155	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4p16.3a	HERV	HERVH	oneside	chr4	399612	402791	-	noncoding	AC092574.2	lncRNA	ANTISENSE	ENSG00000281016	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4p16.3b	HERV	HERVH	oneside	chr4	402861	409299	-	noncoding	AC092574.2	lncRNA	ANTISENSE	ENSG00000281016	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_4p16.3	HERV	HERVFRD	internal	chr4	432971	435817	+	noncoding	AC092574.2,ABCA11P,ZNF721	lncRNA,transcribed_processed_pseudogene,protein_coding	SENSE,ANTISENSE,ANTISENSE	ENSG00000281016,ENSG00000251595,ENSG00000182903	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVL66_4p16.3	HERV	HERVL66	prototype	chr4	451175	455252	+	noncoding	AC092574.2,ABCA11P,ZNF721	lncRNA,transcribed_processed_pseudogene,protein_coding	SENSE,ANTISENSE,ANTISENSE	ENSG00000281016,ENSG00000251595,ENSG00000182903	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_4p16.3a	HERV	MER4	internal	chr4	491737	496139	-	noncoding	ZNF721	protein_coding	SENSE	ENSG00000182903	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_4p16.3	HERV	PRIMA4	internal	chr4	496166	497422	-	noncoding	ZNF721	protein_coding	SENSE	ENSG00000182903	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_4p16.3	HERV	HERVL74	internal	chr4	981650	982755	+	noncoding	DGKQ,SLC26A1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000145214,ENSG00000145217	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_4p16.3	HERV	PRIMA41	internal	chr4	2034407	2036405	-	noncoding	NELFA	protein_coding	SENSE	ENSG00000185049	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR23_4p16.3a	HERV	LTR23	internal	chr4	2052560	2053628	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C4orf48	ENSG00000243449	8590	NAT8L	ENSG00000185818	5699	None	None
LTR23_4p16.3b	HERV	LTR23	internal	chr4	2054090	2055917	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C4orf48	ENSG00000243449	10120	NAT8L	ENSG00000185818	3410	None	chr4:2054348-2054355
ERV316A3_4p16.3a	HERV	ERV316A3	oneside	chr4	2215354	2220064	-	noncoding	POLN,HAUS3	protein_coding,protein_coding	SENSE,SENSE	ENSG00000130997,ENSG00000214367	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4p16.3a	HERV	HERVL	oneside	chr4	2737628	2741531	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM193A	ENSG00000125386	5063	TNIP2	ENSG00000168884	117	None	None
MER4_4p16.3b	HERV	MER4	oneside	chr4	2777383	2782408	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SH3BP2	ENSG00000087266	10663	TNIP2	ENSG00000168884	21041	chr4:2778605-2778802	None
ERV316A3_4p16.3b	HERV	ERV316A3	internal	chr4	3352892	3354204	-	noncoding	RGS12	protein_coding	ANTISENSE	ENSG00000159788	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4p16.3b	HERV	HERVL	oneside	chr4	3453754	3460384	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590235.2	ENSG00000286900	646	DOK7	ENSG00000175920	2922	None	None
ERVLE_4p16.3	HERV	ERVLE	internal	chr4	3684875	3685537	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02600	ENSG00000250986	73211	LINC02171	ENSG00000250632	7020	None	None
HERVE_4p16.3a	HERV	HERVE	internal	chr4	3893334	3897169	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR7E162P	ENSG00000234386	4397	OR7E163P	ENSG00000251166	3085	None	None
HERVH_4p16.3c	HERV	HERVH	prototype	chr4	3927446	3933080	+	noncoding	AC226119.1	lncRNA	ANTISENSE	ENSG00000253917	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:3927816-3927844,chr4:3930175-3930186
HML2_4p16.3b	HERV	HML2	prototype	chr4	3977324	3986912	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC116562.4	ENSG00000284727	61299	ENPP7P9	ENSG00000250476	9664	None	None
HERVH_4p16.3d	HERV	HERVH	prototype	chr4	4000090	4005763	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC116562.4	ENSG00000284727	42448	ENPP7P9	ENSG00000250476	32430	None	None
HERVS71_4p16.3	HERV	HERVS71	prototype	chr4	4030241	4037574	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC116562.4	ENSG00000284727	10637	ENPP7P9	ENSG00000250476	62581	None	chr4:4031696-4031709,chr4:4031895-4031902
HERVK11_4p16.3	HERV	HERVK11	prototype	chr4	4042123	4049160	-	noncoding	AC116562.4	transcribed_unprocessed_pseudogene	SENSE	ENSG00000284727	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:4048254-4048258
ERVLB4_4p16.3	HERV	ERVLB4	internal	chr4	4109275	4109877	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC116562.4	ENSG00000284727	1692	AC116562.2	ENSG00000248669	8048	None	None
HERVE_4p16.3b	HERV	HERVE	internal	chr4	4130633	4134419	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UNC93B4	ENSG00000250381	9039	OR7E103P	ENSG00000198787	3064	None	None
HERVE_4p16.3c	HERV	HERVE	internal	chr4	4160757	4170756	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR7E43P	ENSG00000249844	3563	OR7E99P	ENSG00000250710	3314	None	chr4:4163400-4163418
ERVLE_4p16.1a	HERV	ERVLE	internal	chr4	6555799	6556824	-	noncoding	PPP2R2C	protein_coding	SENSE	ENSG00000074211	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4p16.1a	HERV	ERV316A3	internal	chr4	6570830	6571626	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPP2R2C	ENSG00000074211	7230	MAN2B2	ENSG00000013288	3563	None	None
MER41_4p16.1a	HERV	MER41	prototype	chr4	7084495	7091661	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02447	ENSG00000245468	2115	GRPEL1	ENSG00000109519	16431	None	None
ERVLE_4p16.1b	HERV	ERVLE	internal	chr4	7750967	7752779	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AFAP1-AS1	ENSG00000272620	1298	SORCS2	ENSG00000184985	8131	None	None
ERVLE_4p16.1c	HERV	ERVLE	oneside	chr4	7850687	7853092	+	noncoding	AFAP1	protein_coding	ANTISENSE	ENSG00000196526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_4p16.1b	HERV	MER41	prototype	chr4	8358459	8364122	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104825.1	ENSG00000251615	121	ACOX3	ENSG00000087008	2160	chr4:8359993-8360221	None
HERVW_4p16.1	HERV	HERVW	prototype	chr4	8420365	8427765	+	coding	ACOX3	protein_coding	ANTISENSE	ENSG00000087008	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:8427746-8428108	None
HERV3_4p16.1	HERV	HERV3	internal	chr4	8434382	8439749	+	noncoding	ACOX3,TRMT44	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000087008,ENSG00000155275	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:8436124-8436154,chr4:8435950-8435972
HERVH_4p16.1a	HERV	HERVH	prototype	chr4	8482399	8488709	-	noncoding	TRMT44,AC105345.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000155275,ENSG00000205959	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_4p16.1a	HERV	MER4	oneside	chr4	8561753	8565476	-	noncoding	GPR78	protein_coding	ANTISENSE	ENSG00000155269	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_4p16.1b	HERV	MER4	internal	chr4	8565508	8567291	-	noncoding	GPR78	protein_coding	ANTISENSE	ENSG00000155269	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_4p16.1a	HERV	MER4B	oneside	chr4	8567968	8570774	-	noncoding	GPR78	protein_coding	ANTISENSE	ENSG00000155269	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_4p16.1b	HERV	MER4B	internal	chr4	8570988	8571889	-	noncoding	GPR78	protein_coding	ANTISENSE	ENSG00000155269	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_4p16.1c	HERV	MER4	oneside	chr4	8927308	8935090	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HMX1	ENSG00000215612	55469	AC073648.1	ENSG00000197468	14540	None	None
HERVE_4p16.1a	HERV	HERVE	internal	chr4	8942372	8946429	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HMX1	ENSG00000215612	70533	AC073648.1	ENSG00000197468	3201	None	None
HERVE_4p16.1b	HERV	HERVE	internal	chr4	8973015	8977086	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UNC93B8	ENSG00000249272	9034	AC073648.3	ENSG00000250804	4350	None	None
ERVLB4_4p16.1a	HERV	ERVLB4	internal	chr4	8998461	8999063	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073648.6	ENSG00000284636	1778	AC073648.2	ENSG00000249347	7655	None	None
HERVS71_4p16.1a	HERV	HERVS71	prototype	chr4	9068498	9075838	+	coding	AC108519.1	lncRNA	ANTISENSE	ENSG00000288075	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4p16.1b	HERV	HERVH	oneside	chr4	9094400	9097916	+	noncoding	AC108519.1,ENPP7P10	lncRNA,unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000288075,ENSG00000249767	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_4p16.1c	HERV	HERVE	oneside	chr4	9097917	9106252	+	coding	AC108519.1,ENPP7P10	lncRNA,unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000288075,ENSG00000249767	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4p16.1c	HERV	HERVH	oneside	chr4	9106253	9108459	+	noncoding	AC108519.1,ENPP7P10	lncRNA,unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000288075,ENSG00000249767	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_4p16.1a	HERV	HML2	prototype	chr4	9121786	9131367	+	coding	AC108519.1,ENPP7P10	lncRNA,unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000288075,ENSG00000249767	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVE_4p16.1d	HERV	HERVE	internal	chr4	9451908	9455959	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DEFB131A	ENSG00000186146	1394	OR7E86P	ENSG00000248364	3296	None	None
HERVE_4p16.1e	HERV	HERVE	internal	chr4	9476315	9480369	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR7E84P	ENSG00000284689	6332	OR7E85P	ENSG00000250884	3349	None	None
HERVE_4p16.1f	HERV	HERVE	internal	chr4	9507075	9510917	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UNC93B7	ENSG00000251624	9009	OR7E83P	ENSG00000249866	1988	None	None
ERVLB4_4p16.1b	HERV	ERVLB4	internal	chr4	9530034	9530649	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097493.4	ENSG00000284648	1780	AC097493.3	ENSG00000249443	7758	None	None
HERVS71_4p16.1b	HERV	HERVS71	prototype	chr4	9599829	9607243	+	coding	AC105916.2	lncRNA	ANTISENSE	ENSG00000287117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:9604093-9604219	None
HERVH_4p16.1d	HERV	HERVH	prototype	chr4	9638973	9644753	+	noncoding	AC105916.2	lncRNA	ANTISENSE	ENSG00000287117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_4p16.1b	HERV	HML2	prototype	chr4	9657956	9667550	+	coding	AC105916.2	lncRNA	ANTISENSE	ENSG00000287117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_4p16.1g	HERV	HERVE	internal	chr4	9760450	9763115	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR7E35P	ENSG00000250425	4672	SLC2A9	ENSG00000109667	8038	None	None
MER101_4p16.1	HERV	MER101	oneside	chr4	9967357	9972151	+	noncoding	SLC2A9	protein_coding	ANTISENSE	ENSG00000109667	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4p16.1b	HERV	ERV316A3	oneside	chr4	10048089	10049031	+	noncoding	SLC2A9	protein_coding	ANTISENSE	ENSG00000109667	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_4p16.1a	HERV	HML3	oneside	chr4	10169429	10174596	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006499.1	ENSG00000248777	25227	AC006499.6	ENSG00000251296	1664	chr4:10169715-10170089,chr4:10172431-10173027	None
ERVLE_4p16.1d	HERV	ERVLE	internal	chr4	10188479	10189738	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006499.1	ENSG00000248777	10085	AC006499.6	ENSG00000251296	20714	None	None
ERVLE_4p16.1e	HERV	ERVLE	internal	chr4	10206783	10207559	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006499.8	ENSG00000271544	30654	AC006499.1	ENSG00000248777	6111	None	None
HERVL40_4p16.1	HERV	HERVL40	internal	chr4	10217409	10218296	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006499.8	ENSG00000271544	19917	AC006499.1	ENSG00000248777	16737	None	None
ERV316A3_4p16.1c	HERV	ERV316A3	prototype	chr4	10221301	10223979	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006499.8	ENSG00000271544	14234	AC006499.1	ENSG00000248777	20629	None	None
ERVLE_4p16.1f	HERV	ERVLE	internal	chr4	10228843	10229900	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006499.8	ENSG00000271544	8313	AC006499.1	ENSG00000248777	28171	None	None
HML3_4p16.1b	HERV	HML3	prototype	chr4	10296532	10303470	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC110768.2	ENSG00000250613	107526	AC006499.7	ENSG00000251338	953	None	None
ERV316A3_4p16.1d	HERV	ERV316A3	oneside	chr4	10947811	10949726	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02498	ENSG00000283083	198225	MIR572	ENSG00000207716	419101	None	None
ERV316A3_4p16.1e	HERV	ERV316A3	internal	chr4	11086393	11087056	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR572	ENSG00000207716	281771	LINC02498	ENSG00000283083	336807	None	None
ERV316A3_4p16.1f	HERV	ERV316A3	oneside	chr4	11149646	11151554	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02498	ENSG00000283083	400060	MIR572	ENSG00000207716	217273	None	None
ERV316A3_4p16.1g	HERV	ERV316A3	prototype	chr4	11225121	11227868	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR572	ENSG00000207716	140959	LINC02498	ENSG00000283083	475535	None	None
ERVL_4p15.33	HERV	ERVL	internal	chr4	11374322	11375033	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNPS1P1	ENSG00000250896	1430	HS3ST1	ENSG00000002587	18117	None	None
HERVH_4p15.33a	HERV	HERVH	prototype	chr4	11653569	11659254	-	noncoding	AC005699.1	lncRNA	ANTISENSE	ENSG00000249631	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4p15.33b	HERV	HERVH	prototype	chr4	11806284	11811938	+	noncoding	AC005699.1	lncRNA	SENSE	ENSG00000249631	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:11806709-11806724
HERVH_4p15.33c	HERV	HERVH	prototype	chr4	12363888	12369679	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-578P	ENSG00000212282	51198	ECM1P2	ENSG00000249995	269407	None	None
HERVL_4p15.33	HERV	HERVL	prototype	chr4	12386687	12389960	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ECM1P2	ENSG00000249995	249126	RNU6-578P	ENSG00000212282	73997	None	None
ERV316A3_4p15.33a	HERV	ERV316A3	oneside	chr4	12408246	12412007	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-578P	ENSG00000212282	95556	ECM1P2	ENSG00000249995	227079	None	None
MER4_4p15.33	HERV	MER4	oneside	chr4	12420996	12425702	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-578P	ENSG00000212282	108306	ECM1P2	ENSG00000249995	213384	None	chr4:12425172-12425173
HERVIP10FH_4p15.33	HERV	HERVIP10FH	prototype	chr4	12425703	12431652	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ECM1P2	ENSG00000249995	207434	RNU6-578P	ENSG00000212282	113013	None	None
ERV316A3_4p15.33b	HERV	ERV316A3	internal	chr4	12434311	12436076	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-578P	ENSG00000212282	121621	ECM1P2	ENSG00000249995	203010	None	None
ERVLE_4p15.33	HERV	ERVLE	internal	chr4	12452512	12454239	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-578P	ENSG00000212282	139822	ECM1P2	ENSG00000249995	184847	None	None
ERV316A3_4p15.33c	HERV	ERV316A3	internal	chr4	12542212	12543041	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-578P	ENSG00000212282	229522	ECM1P2	ENSG00000249995	96045	None	None
ERV316A3_4p15.33d	HERV	ERV316A3	oneside	chr4	12616456	12618402	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-578P	ENSG00000212282	303766	ECM1P2	ENSG00000249995	20684	None	None
ERV316A3_4p15.33e	HERV	ERV316A3	internal	chr4	14050624	14051151	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01085	ENSG00000248698	60817	LINC01182	ENSG00000250634	46868	None	None
ERV316A3_4p15.33f	HERV	ERV316A3	prototype	chr4	14076910	14082179	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01085	ENSG00000248698	29789	LINC01182	ENSG00000250634	73154	None	None
HERVH_4p15.33d	HERV	HERVH	prototype	chr4	14169948	14175976	-	noncoding	AC092546.1	lncRNA	ANTISENSE	ENSG00000249988	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4p15.33g	HERV	ERV316A3	oneside	chr4	14311736	14312811	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092546.1	ENSG00000249988	68923	AC006296.3	ENSG00000287360	46589	None	None
ERVLB4_4p15.33	HERV	ERVLB4	oneside	chr4	14533509	14534980	-	noncoding	LINC00504	lncRNA	SENSE	ENSG00000248360	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_4p15.32	HERV	HERVIP10FH	oneside	chr4	15693941	15695719	-	noncoding	FAM200B	protein_coding	ANTISENSE	ENSG00000237765	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:15694081-15694244	None
ERVLB4_4p15.32a	HERV	ERVLB4	internal	chr4	15745548	15746801	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CD38	ENSG00000004468	31474	AC005798.1	ENSG00000248188	1966	None	None
ERVLB4_4p15.32b	HERV	ERVLB4	internal	chr4	15746851	15748716	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CD38	ENSG00000004468	29559	AC005798.1	ENSG00000248188	3269	None	None
HERVL74_4p15.32	HERV	HERVL74	internal	chr4	15946074	15947104	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FGFBP2	ENSG00000137441	13141	FGFBP1	ENSG00000137440	7334	None	None
ERV316A3_4p15.32a	HERV	ERV316A3	oneside	chr4	16356432	16357313	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZEB2P1	ENSG00000249506	3373	AC006427.2	ENSG00000286888	29465	None	None
HERVFRD_4p15.32	HERV	HERVFRD	oneside	chr4	16378090	16380527	-	noncoding	ZEB2P1	transcribed_processed_pseudogene	SENSE	ENSG00000249506	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4p15.32c	HERV	ERVLB4	prototype	chr4	16911175	16915656	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LDB2	ENSG00000169744	12497	AC106894.1	ENSG00000249998	57619	None	None
HERVH_4p15.32	HERV	HERVH	prototype	chr4	16997747	17003925	+	noncoding	AC106894.1	lncRNA	ANTISENSE	ENSG00000249998	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4p15.32b	HERV	ERV316A3	oneside	chr4	17628616	17629628	+	noncoding	MED28,FAM184B	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000118579,ENSG00000047662	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVL_4p15.31a	HERV	HERVL	prototype	chr4	17921652	17926749	+	noncoding	LCORL	protein_coding	ANTISENSE	ENSG00000178177	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4p15.31b	HERV	HERVL	oneside	chr4	18107107	18109100	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093898.1	ENSG00000286046	309562	LCORL	ENSG00000178177	85231	None	None
ERV316A3_4p15.31a	HERV	ERV316A3	internal	chr4	18590134	18591893	+	noncoding	AC093898.1	lncRNA	SENSE	ENSG00000286046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4p15.31b	HERV	ERV316A3	internal	chr4	18709273	18710437	+	noncoding	AC093898.1	lncRNA	SENSE	ENSG00000286046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4p15.31a	HERV	ERVLB4	prototype	chr4	18736693	18740074	-	noncoding	AC093898.1	lncRNA	ANTISENSE	ENSG00000286046	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_4p15.31c	HERV	HERVL	oneside	chr4	18782820	18784419	+	noncoding	AC093898.1	lncRNA	SENSE	ENSG00000286046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_4p15.31	HERV	MER41	prototype	chr4	18871801	18877133	-	noncoding	AC093898.1	lncRNA	ANTISENSE	ENSG00000286046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4p15.31d	HERV	HERVL	oneside	chr4	19088180	19089954	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093898.1	ENSG00000286046	199518	AC006840.1	ENSG00000279918	8245	None	None
HERVH48_4p15.31	HERV	HERVH48	prototype	chr4	19887173	19894363	+	coding	AC024230.1	lncRNA	SENSE	ENSG00000248515	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4p15.31a	HERV	ERVLE	internal	chr4	20137321	20140028	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC098862.1	ENSG00000250611	99349	SLIT2	ENSG00000145147	111877	None	None
ERVLE_4p15.31b	HERV	ERVLE	internal	chr4	20150755	20151634	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC098862.1	ENSG00000250611	112783	SLIT2	ENSG00000145147	100271	None	None
ERVLB4_4p15.31b	HERV	ERVLB4	prototype	chr4	20159602	20163937	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC098862.1	ENSG00000250611	121630	SLIT2	ENSG00000145147	87968	None	None
HERVH_4p15.31a	HERV	HERVH	oneside	chr4	20195710	20199271	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC098862.1	ENSG00000250611	157738	SLIT2	ENSG00000145147	52634	chr4:20196608-20196912	None
MER4_4p15.31a	HERV	MER4	oneside	chr4	20626733	20629769	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PACRGL	ENSG00000163138	66513	SLIT2	ENSG00000145147	6172	None	None
HERVH_4p15.31b	HERV	HERVH	prototype	chr4	20629771	20635978	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PACRGL	ENSG00000163138	60304	SLIT2	ENSG00000145147	9210	chr4:20631625-20631771	None
MER4_4p15.31b	HERV	MER4	oneside	chr4	20636324	20638030	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PACRGL	ENSG00000163138	58252	SLIT2	ENSG00000145147	15763	None	None
ERVLB4_4p15.31c	HERV	ERVLB4	oneside	chr4	20685971	20687717	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PACRGL	ENSG00000163138	8565	SLIT2	ENSG00000145147	65410	None	None
ERVLB4_4p15.2b	HERV	ERVLB4	opposite*	chr4	21639764	21643956	+	noncoding	KCNIP4	protein_coding	ANTISENSE	ENSG00000185774	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4p15.2a	HERV	ERVLE	internal	chr4	22041432	22042700	-	noncoding	AC096719.1	lncRNA	ANTISENSE	ENSG00000250039	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4p15.2b	HERV	ERVLE	internal	chr4	22135254	22140062	+	noncoding	AC096719.1	lncRNA	SENSE	ENSG00000250039	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL66_4p15.2	HERV	HERVL66	prototype	chr4	22334844	22339971	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADGRA3	ENSG00000152990	5100	AC096719.1	ENSG00000250039	4514	None	chr4:22339666-22339685
HERVL_4p15.2a	HERV	HERVL	oneside	chr4	22340526	22342142	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096719.1	ENSG00000250039	10196	ADGRA3	ENSG00000152990	2929	None	None
MER41_4p15.2	HERV	MER41	prototype	chr4	22373540	22382732	+	noncoding	ADGRA3	protein_coding	ANTISENSE	ENSG00000152990	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_4p15.2	HERV	HARLEQUIN	prototype	chr4	22599246	22605466	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC098583.1	ENSG00000244538	4796	AC098583.2	ENSG00000251516	2035	None	chr4:22599814-22599821
HERVL40_4p15.2	HERV	HERVL40	internal	chr4	22990637	22994078	-	noncoding	AC097512.1	lncRNA	ANTISENSE	ENSG00000248837	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4p15.2b	HERV	HERVL	prototype	chr4	23463593	23470134	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RFPL4AP3	ENSG00000251220	44806	AC092440.1	ENSG00000249547	178020	None	None
MER101_4p15.2	HERV	MER101	internal	chr4	23504782	23507140	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RFPL4AP3	ENSG00000251220	7800	AC092440.1	ENSG00000249547	219209	None	None
MER61_4p15.2	HERV	MER61	internal	chr4	23573168	23575586	-	noncoding	AC093607.1	lncRNA	ANTISENSE	ENSG00000250137	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4p15.2a	HERV	ERV316A3	internal	chr4	23679909	23682160	-	noncoding	AC093607.1	lncRNA	ANTISENSE	ENSG00000250137	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4p15.2b	HERV	ERV316A3	internal	chr4	23682202	23682846	-	noncoding	AC093607.1	lncRNA	ANTISENSE	ENSG00000250137	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4p15.2a	HERV	HERVH	prototype	chr4	23722873	23727866	-	noncoding	AC093607.1,ERVH-1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000250137,ENSG00000251292	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4p15.2c	HERV	ERVLE	internal	chr4	23749572	23750669	+	noncoding	AC093607.1	lncRNA	SENSE	ENSG00000250137	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4p15.2c	HERV	HERVL	oneside	chr4	23760759	23763262	+	noncoding	AC093607.1,PPARGC1A	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000250137,ENSG00000109819	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:23762922-23762928
HERVH_4p15.2b	HERV	HERVH	prototype	chr4	24323284	24328210	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPARGC1A	ENSG00000109819	419195	DHX15	ENSG00000109606	189231	chr4:24323306-24323431,chr4:24325646-24326025	None
HERVH_4p15.2c	HERV	HERVH	prototype	chr4	24500975	24506750	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPARGC1A	ENSG00000109819	596886	DHX15	ENSG00000109606	10691	None	None
ERV316A3_4p15.2c	HERV	ERV316A3	oneside	chr4	24590714	24591552	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DHX15	ENSG00000109606	6160	ATP5MGP3	ENSG00000249256	66520	None	None
ERV316A3_4p15.2d	HERV	ERV316A3	internal	chr4	24592264	24593915	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DHX15	ENSG00000109606	7710	ATP5MGP3	ENSG00000249256	64157	None	None
PABLB_4p15.2	HERV	PABLB	oneside	chr4	24599845	24604833	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DHX15	ENSG00000109606	15291	ATP5MGP3	ENSG00000249256	53239	None	None
ERV316A3_4p15.2e	HERV	ERV316A3	oneside	chr4	24607148	24611453	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DHX15	ENSG00000109606	22594	ATP5MGP3	ENSG00000249256	46619	None	None
ERV316A3_4p15.2f	HERV	ERV316A3	internal	chr4	24956553	24958526	+	noncoding	CCDC149	protein_coding	ANTISENSE	ENSG00000181982	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_4p15.2a	HERV	HERVL18	prototype	chr4	24965778	24971675	+	coding	CCDC149	protein_coding	ANTISENSE	ENSG00000181982	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_4p15.2b	HERV	HERVL18	prototype	chr4	25358630	25361736	+	noncoding	ZCCHC4	protein_coding	SENSE	ENSG00000168228	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4p15.2d	HERV	ERVLE	internal	chr4	26455516	26456067	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCKAR	ENSG00000163394	25329	RBPJ	ENSG00000168214	20385	None	None
ERVLB4_4p15.2a	HERV	ERVLB4	oneside	chr4	26887864	26893109	-	noncoding	STIM2	protein_coding	ANTISENSE	ENSG00000109689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4p15.2g	HERV	ERV316A3	internal	chr4	27471214	27474964	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02261	ENSG00000249699	188989	IGBP1P5	ENSG00000250858	110181	None	None
ERV316A3_4p15.2h	HERV	ERV316A3	oneside	chr4	27528392	27531682	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGBP1P5	ENSG00000250858	53463	LINC02261	ENSG00000249699	246167	None	None
ERV316A3_4p15.1a	HERV	ERV316A3	oneside	chr4	27800204	27801465	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGBP1P5	ENSG00000250858	214060	AC007106.2	ENSG00000287389	116288	None	None
ERVLE_4p15.1a	HERV	ERVLE	internal	chr4	27872530	27873991	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007106.2	ENSG00000287389	43762	IGBP1P5	ENSG00000250858	286386	None	None
ERV316A3_4p15.1b	HERV	ERV316A3	oneside	chr4	27964771	27966089	-	noncoding	AC007106.1	lncRNA	SENSE	ENSG00000251410	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4p15.1b	HERV	ERVLE	internal	chr4	27966284	27967225	+	noncoding	AC007106.1	lncRNA	ANTISENSE	ENSG00000251410	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_4p15.1a	HERV	HERVH	prototype	chr4	27974889	27981374	+	noncoding	AC007106.1	lncRNA	ANTISENSE	ENSG00000251410	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL18_4p15.1	HERV	HERVL18	prototype	chr4	28010845	28014985	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093791.2	ENSG00000286321	210984	AC007106.1	ENSG00000251410	25782	chr4:28014738-28014871	None
ERV316A3_4p15.1c	HERV	ERV316A3	internal	chr4	28385346	28386176	-	noncoding	AC093791.1	lncRNA	SENSE	ENSG00000250038	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4p15.1d	HERV	ERV316A3	oneside	chr4	28790603	28794737	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4275	ENSG00000283275	24845	RN7SL101P	ENSG00000243548	79127	None	None
ERV316A3_4p15.1e	HERV	ERV316A3	oneside	chr4	28992643	28997090	+	noncoding	LINC02364	lncRNA	SENSE	ENSG00000250190	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4p15.1f	HERV	ERV316A3	oneside	chr4	29000197	29001164	+	noncoding	LINC02364	lncRNA	SENSE	ENSG00000250190	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_4p15.1a	HERV	HERVL	oneside	chr4	29755956	29757392	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EEF1A1P21	ENSG00000249542	5856	AC097510.1	ENSG00000249564	150267	None	None
HERVL_4p15.1b	HERV	HERVL	oneside	chr4	29784304	29786709	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097510.1	ENSG00000249564	120950	EEF1A1P21	ENSG00000249542	34204	None	None
ERV316A3_4p15.1g	HERV	ERV316A3	oneside	chr4	29839621	29842183	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097510.1	ENSG00000249564	65476	EEF1A1P21	ENSG00000249542	89521	None	None
MER4_4p15.1a	HERV	MER4	prototype	chr4	29857902	29865411	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EEF1A1P21	ENSG00000249542	107802	AC097510.1	ENSG00000249564	42248	None	None
ERVLB4_4p15.1a	HERV	ERVLB4	oneside	chr4	30500725	30503027	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC106868.1	ENSG00000248281	492409	AC098595.1	ENSG00000286596	215778	None	None
ERVLB4_4p15.1b	HERV	ERVLB4	oneside	chr4	30506126	30509643	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC106868.1	ENSG00000248281	497810	AC098595.1	ENSG00000286596	209162	None	None
ERV316A3_4p15.1h	HERV	ERV316A3	oneside	chr4	31316096	31318144	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104071.1	ENSG00000251434	32140	LINC02497	ENSG00000251182	104418	None	None
HUERSP1_4p15.1	HERV	HUERSP1	prototype	chr4	31461431	31467432	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02501	ENSG00000249882	38990	AC104071.1	ENSG00000251434	109706	None	None
HERVL_4p15.1c	HERV	HERVL	prototype	chr4	31501329	31507892	+	noncoding	LINC02501	lncRNA	SENSE	ENSG00000249882	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER101_4p15.1	HERV	MER101	internal	chr4	31614854	31616350	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02506	ENSG00000251129	381026	LINC02501	ENSG00000249882	56023	None	None
ERVLB4_4p15.1c	HERV	ERVLB4	oneside	chr4	31871698	31873279	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02501	ENSG00000249882	312867	LINC02506	ENSG00000251129	124097	None	None
PABLB_4p15.1	HERV	PABLB	internal	chr4	31985397	31988260	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02506	ENSG00000251129	9116	LINC02501	ENSG00000249882	426566	None	None
HERVL_4p15.1d	HERV	HERVL	oneside	chr4	32059951	32063699	-	noncoding	LINC02506	lncRNA	ANTISENSE	ENSG00000251129	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4p15.1c	HERV	ERVLE	internal	chr4	32219403	32220473	+	noncoding	LINC02506	lncRNA	SENSE	ENSG00000251129	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4p15.1d	HERV	ERVLE	internal	chr4	32312511	32317090	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02353	ENSG00000251329	33948	LINC02506	ENSG00000251129	83968	None	None
MER4B_4p15.1a	HERV	MER4B	oneside	chr4	32339689	32341170	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02506	ENSG00000251129	111146	LINC02353	ENSG00000251329	9868	None	None
LTR19_4p15.1a	HERV	LTR19	oneside	chr4	32454712	32456768	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02353	ENSG00000251329	101492	AC116611.1	ENSG00000286784	127087	None	None
ERV316A3_4p15.1i	HERV	ERV316A3	internal	chr4	32462309	32463901	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02353	ENSG00000251329	109089	AC116611.1	ENSG00000286784	119954	None	None
ERVLE_4p15.1e	HERV	ERVLE	internal	chr4	32490510	32492613	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02353	ENSG00000251329	137290	AC116611.1	ENSG00000286784	91242	None	None
ERV316A3_4p15.1j	HERV	ERV316A3	oneside	chr4	32578856	32582199	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC116611.1	ENSG00000286784	1656	LINC02353	ENSG00000251329	225636	None	None
ERVL_4p15.1a	HERV	ERVL	oneside	chr4	32614751	32616962	+	noncoding	AC116611.1	lncRNA	ANTISENSE	ENSG00000286784	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4p15.1d	HERV	ERVLB4	oneside	chr4	32616956	32619575	+	noncoding	AC116611.1	lncRNA	ANTISENSE	ENSG00000286784	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_4p15.1	HERV	LTR57	internal	chr4	32713348	32714652	-	noncoding	AC116611.1	lncRNA	SENSE	ENSG00000286784	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4p15.1f	HERV	ERVLE	internal	chr4	32775679	32776493	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC017013.1	ENSG00000250076	234455	AC116611.1	ENSG00000286784	30154	None	None
MER4_4p15.1b	HERV	MER4	oneside	chr4	32823284	32826854	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC017013.1	ENSG00000250076	184094	AC116611.1	ENSG00000286784	77759	None	None
MER4_4p15.1c	HERV	MER4	internal	chr4	32827095	32829491	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC017013.1	ENSG00000250076	181457	AC116611.1	ENSG00000286784	81570	None	None
PRIMAX_4p15.1	HERV	PRIMAX	internal	chr4	33223516	33225704	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093878.1	ENSG00000249452	12535	AC093606.1	ENSG00000287968	15086	None	None
LTR19_4p15.1b	HERV	LTR19	prototype	chr4	33249958	33256380	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC097535.2	ENSG00000249766	144158	AC093878.1	ENSG00000249452	11288	None	None
MER4_4p15.1d	HERV	MER4	prototype	chr4	33409969	33415961	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097535.2	ENSG00000249766	9290	AC097535.1	ENSG00000248417	17549	None	None
MER4B_4p15.1b	HERV	MER4B	internal	chr4	33410924	33411875	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097535.2	ENSG00000249766	10245	AC097535.1	ENSG00000248417	21635	None	None
HUERSP3B_4p15.1	HERV	HUERSP3B	prototype	chr4	33591009	33600366	+	noncoding	AC079772.1	lncRNA	SENSE	ENSG00000288321	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4p15.1g	HERV	ERVLE	internal	chr4	33637859	33640394	-	noncoding	AC079772.1	lncRNA	ANTISENSE	ENSG00000288321	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4p15.1e	HERV	HERVL	prototype	chr4	33730233	33736923	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC016687.3	ENSG00000250954	38575	AC079772.1	ENSG00000288321	36240	None	None
HERVW_4p15.1	HERV	HERVW	oneside	chr4	33741539	33743350	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079772.1	ENSG00000288321	47546	AC016687.3	ENSG00000250954	32148	None	None
ERV316A3_4p15.1k	HERV	ERV316A3	oneside	chr4	34118193	34120567	-	noncoding	LINC02484	lncRNA	SENSE	ENSG00000248685	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4p15.1l	HERV	ERV316A3	oneside	chr4	34308817	34311349	+	noncoding	LINC02484	lncRNA	ANTISENSE	ENSG00000248685	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4p15.1m	HERV	ERV316A3	internal	chr4	34314756	34316847	+	noncoding	LINC02484	lncRNA	ANTISENSE	ENSG00000248685	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_4p15.1	HERV	HERVFRD	prototype	chr4	34357182	34364200	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093689.1	ENSG00000250597	293406	LINC02484	ENSG00000248685	21831	None	None
ERV316A3_4p15.1n	HERV	ERV316A3	internal	chr4	34416674	34417540	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02484	ENSG00000248685	81323	AC093689.1	ENSG00000250597	240066	None	None
ERVLE_4p15.1h	HERV	ERVLE	internal	chr4	34544165	34545478	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02484	ENSG00000248685	208814	AC093689.1	ENSG00000250597	112128	None	None
ERVL_4p15.1b	HERV	ERVL	internal	chr4	34545884	34547130	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02484	ENSG00000248685	210533	AC093689.1	ENSG00000250597	110476	None	None
ERVL_4p15.1c	HERV	ERVL	prototype	chr4	34692072	34697380	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093913.1	ENSG00000275250	16890	AC093689.1	ENSG00000250597	22640	None	None
HERVH_4p15.1b	HERV	HERVH	oneside	chr4	35017731	35019171	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC020589.1	ENSG00000238694	51387	SEC63P2	ENSG00000250416	468641	None	None
HERVH_4p15.1c	HERV	HERVH	oneside	chr4	35019173	35022255	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SEC63P2	ENSG00000250416	465557	AC020589.1	ENSG00000238694	52829	chr4:35021009-35021818,chr4:35021858-35022508	chr4:35021409-35021427,chr4:35021508-35021535
HERVEA_4p15.1	HERV	HERVEA	prototype	chr4	35100510	35109260	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC020589.1	ENSG00000238694	134166	SEC63P2	ENSG00000250416	378552	chr4:35105992-35106344	chr4:35100900-35100924,chr4:35106309-35106344
HML3_4p15.1	HERV	HML3	prototype	chr4	35139738	35145211	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC020589.1	ENSG00000238694	173394	SEC63P2	ENSG00000250416	342601	None	None
ERVL_4p15.1d	HERV	ERVL	internal	chr4	35203782	35209480	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC020589.1	ENSG00000238694	237438	SEC63P2	ENSG00000250416	278332	None	None
ERVLB4_4p15.1e	HERV	ERVLB4	internal	chr4	35252787	35254223	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SEC63P2	ENSG00000250416	233589	AC020589.1	ENSG00000238694	286443	None	None
ERVLB4_4p15.1f	HERV	ERVLB4	oneside	chr4	35316011	35318898	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC020589.1	ENSG00000238694	349667	SEC63P2	ENSG00000250416	168914	None	None
HERVL_4p15.1f	HERV	HERVL	prototype	chr4	35338847	35345600	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC020589.1	ENSG00000238694	372503	SEC63P2	ENSG00000250416	142212	None	None
ERV316A3_4p15.1o	HERV	ERV316A3	internal	chr4	35619452	35623131	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-573P	ENSG00000206665	123449	ARAP2	ENSG00000047365	325090	None	None
HERV9_4p14	HERV	HERV9	prototype	chr4	35858930	35865009	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARAP2	ENSG00000047365	83212	RNU6-573P	ENSG00000206665	362927	None	None
ERVLE_4p14a	HERV	ERVLE	internal	chr4	36408703	36409816	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104078.2	ENSG00000251438	16293	MIR1255B1	ENSG00000283207	16550	None	None
HERVW_4p14	HERV	HERVW	oneside	chr4	36440530	36443994	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02505	ENSG00000248215	52134	MIR1255B1	ENSG00000283207	14102	None	None
HERVL_4p14a	HERV	HERVL	prototype	chr4	36611545	36614500	+	noncoding	LINC02505	lncRNA	ANTISENSE	ENSG00000248215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4p14b	HERV	HERVL	prototype	chr4	36714492	36720966	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093746.1	ENSG00000287416	181276	LINC02505	ENSG00000248215	72553	None	None
HUERSP3B_4p14	HERV	HUERSP3B	prototype	chr4	36893878	36900976	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02505	ENSG00000248215	251939	AC093746.1	ENSG00000287416	1266	None	None
HARLEQUIN_4p14a	HERV	HARLEQUIN	oneside	chr4	36906915	36913355	+	noncoding	AC093746.1	lncRNA	ANTISENSE	ENSG00000287416	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4p14b	HERV	ERVLE	internal	chr4	37188227	37189843	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136537.1	ENSG00000247810	54378	MIR4801	ENSG00000264319	52067	None	None
HARLEQUIN_4p14b	HERV	HARLEQUIN	prototype	chr4	37546189	37552466	+	coding	C4orf19	protein_coding	SENSE	ENSG00000154274	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4p14c	HERV	ERVLE	internal	chr4	38602647	38604070	+	noncoding	KLF3-AS1	lncRNA	ANTISENSE	ENSG00000231160	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_4p14	HERV	HERV3	prototype	chr4	39484642	39490389	+	coding	LIAS	protein_coding	SENSE	ENSG00000121897	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HML6_4p14	HERV	HML6	prototype	chr4	39539256	39544368	-	noncoding	UGDH-AS1,AC021148.3	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000249348,ENSG00000287262	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr4:39540270-39540618	None
ERVLE_4p14d	HERV	ERVLE	internal	chr4	39952513	39953383	+	noncoding	PDS5A	protein_coding	ANTISENSE	ENSG00000121892	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4p13a	HERV	ERV316A3	prototype	chr4	41829175	41834569	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105389.3	ENSG00000250467	5056	HMGB1P28	ENSG00000249745	7585	None	None
HERVW_4p13	HERV	HERVW	prototype	chr4	42285438	42292896	-	noncoding	AC024022.1	lncRNA	SENSE	ENSG00000250781	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:42292637-42292643
HERVIP10FH_4p13	HERV	HERVIP10FH	prototype	chr4	42313411	42320610	+	coding	AC024022.1	lncRNA	ANTISENSE	ENSG00000250781	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:42313842-42313847
HERVL_4p13a	HERV	HERVL	oneside	chr4	42526339	42531440	+	noncoding	ATP8A1	protein_coding	ANTISENSE	ENSG00000124406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_4p13	HERV	MER41	internal	chr4	42675981	42676710	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096734.2	ENSG00000260519	18053	AC096734.1	ENSG00000251517	29397	None	None
ERV316A3_4p13b	HERV	ERV316A3	oneside	chr4	42906969	42908608	-	noncoding	GRXCR1	protein_coding	ANTISENSE	ENSG00000215203	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4p13a	HERV	ERVLE	internal	chr4	43040801	43041456	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRXCR1	ENSG00000215203	10143	AC111198.1	ENSG00000248939	92411	None	None
HERVI_4p13	HERV	HERVI	oneside	chr4	43072389	43075237	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRXCR1	ENSG00000215203	41731	AC111198.1	ENSG00000248939	58630	None	None
MER4_4p13	HERV	MER4	prototype	chr4	43075795	43082928	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC111198.1	ENSG00000248939	50939	GRXCR1	ENSG00000215203	45137	None	None
HERVL_4p13b	HERV	HERVL	oneside	chr4	43445338	43450696	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02383	ENSG00000248143	6831	AC098590.1	ENSG00000213851	34401	None	None
HML1_4p13	HERV	HML1	prototype	chr4	43468818	43472828	+	noncoding	LINC02383	lncRNA	ANTISENSE	ENSG00000248143	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4p13b	HERV	ERVLE	internal	chr4	43517758	43518523	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114774.1	ENSG00000251501	67805	LINC02383	ENSG00000248143	25215	None	None
HERVL_4p13c	HERV	HERVL	internal	chr4	43590737	43592107	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL691P	ENSG00000239464	6437	AC114774.1	ENSG00000251501	2640	None	None
ERVLE_4p13c	HERV	ERVLE	oneside	chr4	43868376	43869788	-	noncoding	AC080132.1	lncRNA	ANTISENSE	ENSG00000286891	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_4p13	HERV	HUERSP2	prototype	chr4	43902962	43907555	+	noncoding	AC080132.1	lncRNA	SENSE	ENSG00000286891	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4p13d	HERV	ERVLE	internal	chr4	44037167	44038691	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114757.1	ENSG00000250863	11651	KCTD8	ENSG00000183783	135212	None	None
HERVL18_4p13	HERV	HERVL18	prototype	chr4	44485460	44487778	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCTD8	ENSG00000183783	36651	AC093852.1	ENSG00000251159	45837	None	None
HERVFRD_4p12a	HERV	HERVFRD	prototype	chr4	44771629	44778461	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GNPDA2	ENSG00000163281	45041	AC093755.1	ENSG00000249729	61919	None	None
HML5_4p12	HERV	HML5	oneside	chr4	44791754	44793200	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GNPDA2	ENSG00000163281	65166	AC093755.1	ENSG00000249729	47180	None	None
ERV316A3_4p12a	HERV	ERV316A3	oneside	chr4	44801902	44805620	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GNPDA2	ENSG00000163281	75314	AC093755.1	ENSG00000249729	34760	None	None
HARLEQUIN_4p12	HERV	HARLEQUIN	prototype	chr4	44820315	44828644	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093755.1	ENSG00000249729	11736	GNPDA2	ENSG00000163281	93727	None	None
HERVFRD_4p12b	HERV	HERVFRD	prototype	chr4	44986703	44996976	+	noncoding	AC108467.2	processed_pseudogene	SENSE	ENSG00000275959	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_4p12	HERV	HML3	prototype	chr4	45042048	45049024	+	coding	AC108467.1	lncRNA	SENSE	ENSG00000248744	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4p12a	HERV	ERVLE	internal	chr4	45199103	45201397	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	THAP12P9	ENSG00000248320	121856	AC108467.1	ENSG00000248744	147451	None	None
ERVLE_4p12b	HERV	ERVLE	internal	chr4	45249891	45251209	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	THAP12P9	ENSG00000248320	72044	AC108467.1	ENSG00000248744	198239	None	None
ERV316A3_4p12b	HERV	ERV316A3	internal	chr4	45405672	45406846	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108043.1	ENSG00000224560	7491	THAP12P9	ENSG00000248320	79644	None	None
ERVLB4_4p12a	HERV	ERVLB4	oneside	chr4	45411701	45416951	+	noncoding	AC108043.1	processed_pseudogene	ANTISENSE	ENSG00000224560	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4p12c	HERV	ERV316A3	internal	chr4	45554252	45555334	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP199	ENSG00000222257	439785	RNU6-931P	ENSG00000200720	74116	None	None
HERVH48_4p12	HERV	HERVH48	prototype	chr4	45606937	45614094	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-931P	ENSG00000200720	126801	RN7SKP199	ENSG00000222257	381025	None	None
ERV316A3_4p12d	HERV	ERV316A3	oneside	chr4	45677733	45681279	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-931P	ENSG00000200720	197597	RN7SKP199	ENSG00000222257	313840	None	None
ERV316A3_4p12e	HERV	ERV316A3	oneside	chr4	45687415	45689470	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP199	ENSG00000222257	305649	RNU6-931P	ENSG00000200720	207279	None	None
ERV316A3_4p12f	HERV	ERV316A3	internal	chr4	45715217	45718460	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-931P	ENSG00000200720	235081	RN7SKP199	ENSG00000222257	276659	None	None
ERVLE_4p12c	HERV	ERVLE	internal	chr4	46132097	46135708	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GABRG1	ENSG00000163285	8043	AC104072.1	ENSG00000260878	107840	None	None
HERVL_4p12a	HERV	HERVL	prototype	chr4	46156611	46159875	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GABRG1	ENSG00000163285	32557	AC104072.1	ENSG00000260878	83673	None	None
ERVLB4_4p12b	HERV	ERVLB4	prototype	chr4	46223017	46229708	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GABRG1	ENSG00000163285	98963	AC104072.1	ENSG00000260878	13840	None	None
HERVL_4p12b	HERV	HERVL	prototype	chr4	46291379	46297476	+	noncoding	GABRA2	protein_coding	ANTISENSE	ENSG00000151834	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:46296652-46296656
PABLB_4p12a	HERV	PABLB	internal	chr4	46402355	46404432	-	noncoding	GABRA2,AC095060.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000151834,ENSG00000249330	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLB_4p12b	HERV	PABLB	internal	chr4	46410822	46411489	-	noncoding	GABRA2,AC095060.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000151834,ENSG00000249330	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4p12c	HERV	HERVL	oneside	chr4	46485515	46490651	+	noncoding	AC095060.1	lncRNA	SENSE	ENSG00000249330	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_4p12d	HERV	HERVL	oneside	chr4	46518016	46523035	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-412P	ENSG00000252243	8202	AC095060.1	ENSG00000249330	7822	None	None
HERVL_4p12e	HERV	HERVL	oneside	chr4	46523144	46525077	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-412P	ENSG00000252243	6160	AC095060.1	ENSG00000249330	12950	None	None
HERVL_4p12f	HERV	HERVL	oneside	chr4	46636947	46641369	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAC1P2	ENSG00000249936	82461	RNU6-412P	ENSG00000252243	105605	None	None
ERVLE_4p12d	HERV	ERVLE	oneside	chr4	46729772	46731793	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAC1P2	ENSG00000249936	5364	COX7B2	ENSG00000170516	3034	None	None
ERVLB4_4p12c	HERV	ERVLB4	oneside	chr4	46792266	46798906	+	noncoding	COX7B2	protein_coding	ANTISENSE	ENSG00000170516	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4p12g	HERV	ERV316A3	oneside	chr4	47945917	47949520	+	noncoding	NIPAL1,CNGA1	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000163293,ENSG00000198515	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_4p12a	HERV	MER4	internal	chr4	48004464	48008688	-	noncoding	NIPAL1,CNGA1	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000163293,ENSG00000198515	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_4p12b	HERV	MER4	internal	chr4	48008889	48010455	-	noncoding	NIPAL1,CNGA1	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000163293,ENSG00000198515	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_4p12c	HERV	MER4	internal	chr4	48011252	48013262	-	noncoding	NIPAL1,CNGA1	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000163293,ENSG00000198515	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:48012914-48012947
ERVLE_4p12e	HERV	ERVLE	internal	chr4	48117258	48118641	-	noncoding	TXK	protein_coding	SENSE	ENSG00000074966	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_4p11a	HERV	MER4	internal	chr4	49207302	49208281	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC118282.2	ENSG00000249079	3970	AC118282.3	ENSG00000249828	3576	None	None
MER4_4p11b	HERV	MER4	internal	chr4	49584193	49585173	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC119751.4	ENSG00000250753	4004	SNX18P25	ENSG00000249337	3599	None	None
HERVIP10F_4q12	HERV	HERVIP10F	internal	chr4	51817237	51819827	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DCUN1D4	ENSG00000109184	23173	SNX18P25	ENSG00000249337	2227708	None	None
ERVLB4_4q12a	HERV	ERVLB4	oneside	chr4	51921903	51926197	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104784.1	ENSG00000243929	51882	AC027271.1	ENSG00000272576	2522	None	None
ERVLB4_4q12b	HERV	ERVLB4	internal	chr4	51926541	51927443	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104784.1	ENSG00000243929	50636	AC027271.1	ENSG00000272576	7160	None	None
ERVLB4_4q12c	HERV	ERVLB4	oneside	chr4	51927522	51930053	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104784.1	ENSG00000243929	48026	AC027271.1	ENSG00000272576	8141	None	None
PRIMA41_4q12	HERV	PRIMA41	prototype	chr4	52345017	52351152	-	coding	AC097522.2	lncRNA	SENSE	ENSG00000287999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR23_4q12	HERV	LTR23	internal	chr4	52687704	52689934	+	noncoding	AC104066.4	lncRNA	SENSE	ENSG00000260120	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q12a	HERV	HERVH	prototype	chr4	54020079	54025546	+	noncoding	AC058822.1,CHIC2	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000282278,ENSG00000109220	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:54019964-54020563,chr4:54024582-54024800	chr4:54020305-54020339,chr4:54020465-54020473
ERVLE_4q12a	HERV	ERVLE	internal	chr4	54959605	54960538	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC111194.1	ENSG00000248317	1773	RPL38P3	ENSG00000244422	15621	None	None
HERVIP10FH_4q12	HERV	HERVIP10FH	oneside	chr4	55338515	55341621	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LRRC34P2	ENSG00000250464	24591	SRD5A3	ENSG00000128039	4621	None	None
HERV4_4q12	HERV	HERV4	prototype	chr4	55938235	55948186	-	noncoding	AC110611.2	lncRNA	SENSE	ENSG00000287382	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:55947597-55947601,chr4:55947898-55947914,chr4:55947921-55947932,chr4:55947953-55947974,chr4:55947983-55948001,chr4:55948002-55948037
HERVL40_4q12	HERV	HERVL40	oneside	chr4	56037895	56041727	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CRACD	ENSG00000109265	7346	CEP135	ENSG00000174799	4534	None	chr4:56037924-56037931
ERVLB4_4q12d	HERV	ERVLB4	oneside	chr4	56255572	56260979	+	noncoding	CRACD	protein_coding	SENSE	ENSG00000109265	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q12b	HERV	ERVLE	oneside	chr4	56584757	56585937	-	noncoding	THEGL	protein_coding	ANTISENSE	ENSG00000249693	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_4q12a	HERV	MER41	prototype	chr4	56947811	56950653	-	noncoding	REST	protein_coding	ANTISENSE	ENSG00000084093	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_4q12b	HERV	MER41	prototype	chr4	57135749	57141668	-	noncoding	IGFBP7-AS1	lncRNA	ANTISENSE	ENSG00000245067	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q12c	HERV	ERVLE	internal	chr4	57500653	57501395	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC013724.1	ENSG00000251459	4809	AC107396.1	ENSG00000251049	94545	None	None
MER4B_4q12	HERV	MER4B	internal	chr4	57825255	57828193	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104790.1	ENSG00000285998	13528	AC093725.1	ENSG00000249831	100600	None	None
ERVLE_4q12d	HERV	ERVLE	internal	chr4	57834043	57835937	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104790.1	ENSG00000285998	5784	AC093725.1	ENSG00000249831	109388	None	None
ERVLE_4q12e	HERV	ERVLE	internal	chr4	57850894	57854286	+	noncoding	AC104790.1	lncRNA	SENSE	ENSG00000285998	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q12	HERV	ERV316A3	internal	chr4	58101288	58103143	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SRIP1	ENSG00000248660	4	AC104790.1	ENSG00000285998	246017	None	None
HERVH_4q12b	HERV	HERVH	oneside	chr4	58290740	58295539	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02494	ENSG00000250340	228976	AC096725.1	ENSG00000249105	172670	None	None
ERVLB4_4q12e	HERV	ERVLB4	internal	chr4	58361092	58363712	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096725.1	ENSG00000249105	243022	LINC02494	ENSG00000250340	160803	None	None
MER61_4q12	HERV	MER61	internal	chr4	58490698	58491703	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02494	ENSG00000250340	32812	AC096725.1	ENSG00000249105	372628	None	None
MER41_4q13.1a	HERV	MER41	internal	chr4	58669572	58675111	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC019133.1	ENSG00000250078	104360	AC017091.1	ENSG00000251339	105515	None	None
ERVLE_4q13.1a	HERV	ERVLE	internal	chr4	58961954	58962495	-	noncoding	AC017091.1,LINC02619	lncRNA,lncRNA	SENSE,SENSE	ENSG00000251339,ENSG00000249382	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q13.1b	HERV	ERVLE	internal	chr4	59000597	59001260	+	noncoding	LINC02429	lncRNA	SENSE	ENSG00000251266	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q13.1a	HERV	ERV316A3	oneside	chr4	59135516	59138895	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108517.2	ENSG00000286097	12029	AC097501.1	ENSG00000250375	60260	None	None
ERVLE_4q13.1c	HERV	ERVLE	internal	chr4	59198493	59199991	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096588.1	ENSG00000199780	333795	AC108517.2	ENSG00000286097	18079	None	None
ERVLB4_4q13.1a	HERV	ERVLB4	oneside	chr4	59281105	59283956	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096588.1	ENSG00000199780	249830	AC108517.2	ENSG00000286097	100691	None	None
HUERSP2_4q13.1	HERV	HUERSP2	prototype	chr4	59374527	59379151	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096588.1	ENSG00000199780	154635	AC108517.2	ENSG00000286097	194113	None	None
HERVL_4q13.1a	HERV	HERVL	oneside	chr4	59541765	59546394	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096588.2	ENSG00000249392	4748	AC096588.1	ENSG00000199780	7867	None	None
ERV316A3_4q13.1b	HERV	ERV316A3	oneside	chr4	59678275	59681045	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096588.2	ENSG00000249392	47951	AC093857.1	ENSG00000249892	86771	None	None
ERVLB4_4q13.1b	HERV	ERVLB4	internal	chr4	59687797	59690342	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096588.2	ENSG00000249392	57473	AC093857.1	ENSG00000249892	77474	None	None
ERVLB4_4q13.1c	HERV	ERVLB4	oneside	chr4	59903568	59905285	-	noncoding	AC092596.2	lncRNA	SENSE	ENSG00000287174	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q13.1b	HERV	HERVL	prototype	chr4	59909021	59915791	+	noncoding	AC092596.2	lncRNA	ANTISENSE	ENSG00000287174	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q13.1d	HERV	ERVLE	prototype	chr4	59985039	59987800	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092596.2	ENSG00000287174	64369	AC097655.1	ENSG00000283043	50469	None	None
MER41_4q13.1b	HERV	MER41	internal	chr4	59994858	59995316	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097655.1	ENSG00000283043	42953	AC092596.2	ENSG00000287174	74188	None	None
MER41_4q13.1c	HERV	MER41	internal	chr4	59995384	59999264	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097655.1	ENSG00000283043	39005	AC092596.2	ENSG00000287174	74714	None	None
MER61_4q13.1a	HERV	MER61	internal	chr4	59999341	59999999	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097655.1	ENSG00000283043	38270	AC092596.2	ENSG00000287174	78671	None	None
ERV316A3_4q13.1c	HERV	ERV316A3	oneside	chr4	60613782	60618644	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097655.1	ENSG00000283043	575196	LINC02496	ENSG00000249066	131931	None	None
ERV316A3_4q13.1d	HERV	ERV316A3	prototype	chr4	61049292	61051530	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02271	ENSG00000240152	92126	MIR548AG1	ENSG00000265829	126608	None	None
HERVL18_4q13.1	HERV	HERVL18	prototype	chr4	61424015	61428429	-	coding	ADGRL3,AC020741.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000150471,ENSG00000205682	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q13.1	HERV	HERVH	prototype	chr4	61764218	61770025	-	noncoding	ADGRL3	protein_coding	ANTISENSE	ENSG00000150471	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:61769623-61769634,chr4:61769641-61769653
HUERSP1_4q13.1	HERV	HUERSP1	oneside	chr4	61833284	61836083	-	noncoding	ADGRL3	protein_coding	ANTISENSE	ENSG00000150471	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q13.1c	HERV	HERVL	prototype	chr4	62161515	62167059	+	coding	ADGRL3-AS1	lncRNA	ANTISENSE	ENSG00000248692	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q13.1e	HERV	ERVLE	internal	chr4	62194774	62197305	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADGRL3-AS1	ENSG00000248692	29220	RPL21P47	ENSG00000241344	50989	None	None
ERVLE_4q13.1f	HERV	ERVLE	internal	chr4	62391836	62393360	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074087.2	ENSG00000288567	60885	AC105313.1	ENSG00000250249	99499	None	None
HERVL_4q13.1d	HERV	HERVL	prototype	chr4	62417950	62424697	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074087.2	ENSG00000288567	29548	AC105313.1	ENSG00000250249	125613	None	None
ERV316A3_4q13.1e	HERV	ERV316A3	internal	chr4	62516313	62517430	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EXOC5P1	ENSG00000180673	299396	HMGN1P11	ENSG00000248336	5542	None	None
ERVLE_4q13.1g	HERV	ERVLE	oneside	chr4	62831543	62835350	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097491.1	ENSG00000251055	292961	EXOC5P1	ENSG00000180673	12749	None	None
ERVLB4_4q13.1d	HERV	ERVLB4	oneside	chr4	62866918	62868079	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EXOC5P1	ENSG00000180673	48124	AC097491.1	ENSG00000251055	260232	None	None
ERVLB4_4q13.1e	HERV	ERVLB4	internal	chr4	62871949	62872914	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EXOC5P1	ENSG00000180673	53155	AC097491.1	ENSG00000251055	255397	None	None
ERVLE_4q13.1h	HERV	ERVLE	internal	chr4	62879122	62879773	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EXOC5P1	ENSG00000180673	60328	AC097491.1	ENSG00000251055	248538	None	None
HERVW_4q13.1a	HERV	HERVW	oneside	chr4	62971017	62973703	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EXOC5P1	ENSG00000180673	152223	AC097491.1	ENSG00000251055	154608	None	None
HERVW_4q13.1b	HERV	HERVW	oneside	chr4	62974410	62977760	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EXOC5P1	ENSG00000180673	155616	AC097491.1	ENSG00000251055	150551	None	None
ERVLE_4q13.1i	HERV	ERVLE	internal	chr4	63031618	63032233	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097491.1	ENSG00000251055	96078	EXOC5P1	ENSG00000180673	212824	None	None
HERV9_4q13.1a	HERV	HERV9	prototype	chr4	63052532	63062525	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EXOC5P1	ENSG00000180673	233738	AC097491.1	ENSG00000251055	65786	None	None
ERV316A3_4q13.1f	HERV	ERV316A3	oneside	chr4	63088768	63089735	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097491.1	ENSG00000251055	38576	EXOC5P1	ENSG00000180673	269974	None	None
ERV316A3_4q13.1g	HERV	ERV316A3	internal	chr4	63162004	63163197	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097491.1	ENSG00000251055	18123	LARP1BP1	ENSG00000231442	186917	None	None
HERV9_4q13.1b	HERV	HERV9	oneside	chr4	63190356	63193079	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097491.1	ENSG00000251055	46475	LARP1BP1	ENSG00000231442	157035	None	None
MER101_4q13.1	HERV	MER101	internal	chr4	63411986	63412445	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093730.1	ENSG00000250775	53066	LARP1BP1	ENSG00000231442	60514	None	None
ERVLE_4q13.1j	HERV	ERVLE	internal	chr4	63439565	63440728	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093730.1	ENSG00000250775	24783	LARP1BP1	ENSG00000231442	88093	None	None
ERVLB4_4q13.1f	HERV	ERVLB4	internal	chr4	63470839	63472808	+	noncoding	AC093730.1	lncRNA	ANTISENSE	ENSG00000250775	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q13.1e	HERV	HERVL	prototype	chr4	63564437	63573316	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093730.1	ENSG00000250775	34676	TECRL	ENSG00000205678	701941	None	None
ERVLB4_4q13.1g	HERV	ERVLB4	internal	chr4	63649491	63651135	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093730.1	ENSG00000250775	119730	TECRL	ENSG00000205678	624122	None	None
ERV316A3_4q13.1h	HERV	ERV316A3	oneside	chr4	63776454	63778380	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TECRL	ENSG00000205678	496877	AC093730.1	ENSG00000250775	246693	None	None
ERVLE_4q13.1k	HERV	ERVLE	internal	chr4	63890382	63892433	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TECRL	ENSG00000205678	382824	AC093730.1	ENSG00000250775	360621	None	None
ERVLB4_4q13.1h	HERV	ERVLB4	oneside	chr4	63908927	63910693	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TECRL	ENSG00000205678	364564	AC093730.1	ENSG00000250775	379166	None	None
ERV316A3_4q13.1i	HERV	ERV316A3	oneside	chr4	63970511	63973278	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TECRL	ENSG00000205678	301979	AC093730.1	ENSG00000250775	440750	None	None
MER4B_4q13.1a	HERV	MER4B	oneside	chr4	64000553	64002823	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TECRL	ENSG00000205678	272434	AC093730.1	ENSG00000250775	470792	None	None
ERVLB4_4q13.1i	HERV	ERVLB4	internal	chr4	64070340	64073236	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093730.1	ENSG00000250775	540579	TECRL	ENSG00000205678	202021	None	None
ERVLB4_4q13.1j	HERV	ERVLB4	internal	chr4	64076695	64077895	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093730.1	ENSG00000250775	546934	TECRL	ENSG00000205678	197362	None	None
HERVK11_4q13.1	HERV	HERVK11	prototype	chr4	64142030	64148096	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TECRL	ENSG00000205678	127161	AC093730.1	ENSG00000250775	612269	None	None
LTR25_4q13.1a	HERV	LTR25	internal	chr4	64229529	64232344	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TECRL	ENSG00000205678	42913	AC093730.1	ENSG00000250775	699768	None	None
MER41_4q13.1d	HERV	MER41	prototype	chr4	64261256	64268352	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TECRL	ENSG00000205678	6905	AC093730.1	ENSG00000250775	731495	None	None
ERV316A3_4q13.1j	HERV	ERV316A3	prototype	chr4	64282949	64285389	+	noncoding	TECRL	protein_coding	ANTISENSE	ENSG00000205678	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_4q13.1b	HERV	LTR25	internal	chr4	64306048	64307997	+	noncoding	TECRL	protein_coding	ANTISENSE	ENSG00000205678	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_4q13.1b	HERV	MER4B	oneside	chr4	64442683	64446236	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO3P27	ENSG00000251430	160182	DPP3P1	ENSG00000250768	9468	None	None
HML3_4q13.1	HERV	HML3	prototype	chr4	64562635	64569783	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DPP3P1	ENSG00000250768	129420	MTCO3P27	ENSG00000251430	36635	None	None
ERVLB4_4q13.1k	HERV	ERVLB4	internal	chr4	64588950	64591672	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO3P27	ENSG00000251430	14746	DPP3P1	ENSG00000250768	155735	None	None
HML5_4q13.1	HERV	HML5	prototype	chr4	64623018	64625587	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104689.1	ENSG00000244669	141543	MTCO3P28	ENSG00000248328	11130	None	None
HERVL_4q13.1f	HERV	HERVL	prototype	chr4	64672072	64678541	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104689.1	ENSG00000244669	88589	MTCO3P28	ENSG00000248328	60184	None	None
HUERSP3_4q13.1	HERV	HUERSP3	prototype	chr4	64712680	64719516	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104689.1	ENSG00000244669	47614	MTCO3P28	ENSG00000248328	100792	None	None
MER61_4q13.1b	HERV	MER61	oneside	chr4	64953366	64957440	+	noncoding	LINC02232	lncRNA	ANTISENSE	ENSG00000250125	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q13.1k	HERV	ERV316A3	oneside	chr4	65061530	65065243	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EFL1P2	ENSG00000248998	77460	AC107058.1	ENSG00000248447	25513	None	None
MER61_4q13.1c	HERV	MER61	prototype	chr4	65075968	65080363	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107058.1	ENSG00000248447	39951	EFL1P2	ENSG00000248998	62340	None	None
ERVL_4q13.1	HERV	ERVL	prototype	chr4	65140542	65142641	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EFL1P2	ENSG00000248998	62	AC107058.1	ENSG00000248447	104525	None	None
ERVLB4_4q13.1l	HERV	ERVLB4	prototype	chr4	65265189	65268152	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02835	ENSG00000285711	23375	EPHA5	ENSG00000145242	51411	None	None
ERV316A3_4q13.1l	HERV	ERV316A3	internal	chr4	65303079	65305264	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02835	ENSG00000285711	61265	EPHA5	ENSG00000145242	14299	None	None
ERV316A3_4q13.1m	HERV	ERV316A3	oneside	chr4	65339174	65341134	+	noncoding	EPHA5	protein_coding	ANTISENSE	ENSG00000145242	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q13.1l	HERV	ERVLE	internal	chr4	65481236	65484520	+	noncoding	EPHA5	protein_coding	ANTISENSE	ENSG00000145242	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_4q13.2a	HERV	MER41	oneside	chr4	65741735	65744722	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104137.1	ENSG00000248479	36182	RNU2-40P	ENSG00000222765	62518	None	None
HERVL_4q13.2a	HERV	HERVL	prototype	chr4	65807728	65815681	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU2-40P	ENSG00000222765	293	AC097110.1	ENSG00000251527	43080	None	None
ERV316A3_4q13.2a	HERV	ERV316A3	oneside	chr4	66006443	66008245	-	noncoding	AC116049.2,AC096721.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000249413,ENSG00000272304	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q13.2b	HERV	HERVL	prototype	chr4	66086661	66092487	-	noncoding	AC116049.2	lncRNA	ANTISENSE	ENSG00000249413	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q13.2b	HERV	ERV316A3	oneside	chr4	66154961	66155998	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC116049.2	ENSG00000249413	4949	AC110809.1	ENSG00000287383	13780	None	None
ERVLB4_4q13.2a	HERV	ERVLB4	prototype	chr4	66620454	66627331	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS23P3	ENSG00000244099	188933	RNU6-699P	ENSG00000252890	269931	None	None
ERV316A3_4q13.2c	HERV	ERV316A3	internal	chr4	66779367	66781023	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS23P3	ENSG00000244099	347846	RNU6-699P	ENSG00000252890	116239	None	None
ERVLE_4q13.2a	HERV	ERVLE	oneside	chr4	67020593	67023089	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104806.2	ENSG00000250075	394216	RNU6-699P	ENSG00000252890	123222	None	None
ERV316A3_4q13.2d	HERV	ERV316A3	oneside	chr4	67043410	67047249	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104806.2	ENSG00000250075	370056	RNU6-699P	ENSG00000252890	146039	None	None
ERVLE_4q13.2b	HERV	ERVLE	internal	chr4	67256989	67261877	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104806.2	ENSG00000250075	155428	RNU6-699P	ENSG00000252890	359618	None	None
MER41_4q13.2b	HERV	MER41	internal	chr4	67283376	67285541	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104806.2	ENSG00000250075	131764	RNU6-699P	ENSG00000252890	386005	None	None
ERV316A3_4q13.2e	HERV	ERV316A3	oneside	chr4	67891965	67894000	+	noncoding	UBA6-AS1	lncRNA	SENSE	ENSG00000248049	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:67893531-67893807	None
ERV316A3_4q13.2f	HERV	ERV316A3	oneside	chr4	67983409	67985637	+	noncoding	UBA6-AS1	lncRNA	SENSE	ENSG00000248049	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q13.2	HERV	HERVH	prototype	chr4	68030946	68037573	+	noncoding	UBA6-AS1	lncRNA	SENSE	ENSG00000248049	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_4q13.2c	HERV	MER41	prototype	chr4	68259844	68265588	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMPRSS11B	ENSG00000185873	14150	AC098799.3	ENSG00000250642	16873	None	None
MER41_4q13.2d	HERV	MER41	oneside	chr4	68295086	68296972	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC098799.2	ENSG00000249531	3353	AC098799.1	ENSG00000248639	722	None	None
MER4_4q13.2a	HERV	MER4	prototype	chr4	68404735	68410536	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MT2P1	ENSG00000162840	28230	TMPRSS11E	ENSG00000087128	36927	chr4:68405886-68406280	None
MER4_4q13.2b	HERV	MER4	prototype	chr4	68552163	68558983	+	noncoding	UGT2B17	protein_coding	ANTISENSE	ENSG00000197888	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_4q13.2a	HERV	HARLEQUIN	oneside	chr4	68571156	68576696	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC147055.2	ENSG00000249472	37723	UGT2B17	ENSG00000197888	2629	chr4:68572534-68572570	chr4:68576321-68576323
HERVH48_4q13.2a	HERV	HERVH48	oneside	chr4	68576697	68582193	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UGT2B17	ENSG00000197888	8170	AC147055.2	ENSG00000249472	32226	None	chr4:68581100-68581101
PRIMA41_4q13.2a	HERV	PRIMA41	oneside	chr4	68589945	68593527	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UGT2B17	ENSG00000197888	21418	AC147055.2	ENSG00000249472	20892	None	None
HML2_4q13.2	HERV	HML2	prototype	chr4	68597991	68603505	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UGT2B17	ENSG00000197888	29464	AC147055.2	ENSG00000249472	10914	None	None
PRIMA41_4q13.2b	HERV	PRIMA41	internal	chr4	68605422	68606192	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UGT2B17	ENSG00000197888	36895	AC147055.2	ENSG00000249472	8227	None	None
MER4_4q13.2c	HERV	MER4	oneside	chr4	68656982	68661386	+	noncoding	UGT2B15	protein_coding	ANTISENSE	ENSG00000196620	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH48_4q13.2b	HERV	HERVH48	oneside	chr4	68671742	68677470	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UGT2B15	ENSG00000196620	1090	AC147055.1	ENSG00000248635	27130	None	None
MER61_4q13.2	HERV	MER61	prototype	chr4	68735173	68737101	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093720.1	ENSG00000250376	47517	AC147055.1	ENSG00000248635	22675	chr4:68736945-68737063	chr4:68737032-68737063
HML6_4q13.2	HERV	HML6	prototype	chr4	68744586	68751238	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093720.1	ENSG00000250376	33380	AC147055.1	ENSG00000248635	32088	None	chr4:68748544-68748547,chr4:68750931-68750938
HERV30_4q13.2a	HERV	HERV30	oneside	chr4	68801310	68805681	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093720.1	ENSG00000250376	13836	AC021146.8	ENSG00000251236	8314	None	None
MER4B_4q13.2a	HERV	MER4B	oneside	chr4	68864341	68874793	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021146.4	ENSG00000249235	2731	AC021146.11	ENSG00000251529	2833	None	None
ERVLB4_4q13.2b	HERV	ERVLB4	oneside	chr4	68886736	68889248	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021146.3	ENSG00000248613	11403	AC021146.2	ENSG00000248547	2296	None	None
HERV3_4q13.2a	HERV	HERV3	oneside	chr4	68901045	68907797	-	noncoding	AC021146.12	lncRNA	SENSE	ENSG00000272626	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:68907211-68907215
MER4B_4q13.2b	HERV	MER4B	oneside	chr4	68952944	68962940	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UGT2A3	ENSG00000135220	1140	AC021146.10	ENSG00000251498	10059	None	None
LTR57_4q13.2	HERV	LTR57	internal	chr4	68957548	68958189	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UGT2A3	ENSG00000135220	5744	AC021146.10	ENSG00000251498	14810	None	None
HARLEQUIN_4q13.2b	HERV	HARLEQUIN	prototype	chr4	69050860	69057338	+	coding	UGT2B7	protein_coding	SENSE	ENSG00000171234	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chr4:69055001-69055352	chr4:69051360-69051383,chr4:69051423-69051436,chr4:69051483-69051517,chr4:69056964-69056998,chr4:69051231-69051275,chr4:69051450-69051457
HERV3_4q13.2b	HERV	HERV3	oneside	chr4	69057663	69064798	+	noncoding	UGT2B7	protein_coding	SENSE	ENSG00000171234	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:69063947-69063954,chr4:69063976-69063981
HERVK11_4q13.2	HERV	HERVK11	prototype	chr4	69191808	69199234	+	noncoding	AC111000.4	lncRNA	SENSE	ENSG00000250696	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV30_4q13.2b	HERV	HERV30	oneside	chr4	69220529	69225367	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114786.1	ENSG00000249763	17261	AC111000.4	ENSG00000250696	3763	None	None
ERV316A3_4q13.2g	HERV	ERV316A3	internal	chr4	69264033	69265740	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UGT2B28	ENSG00000135226	14735	AC114786.1	ENSG00000249763	13218	None	None
HERV30_4q13.2c	HERV	HERV30	prototype	chr4	69266940	69272665	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114786.1	ENSG00000249763	16125	UGT2B28	ENSG00000135226	7810	None	None
HERV30_4q13.2d	HERV	HERV30	prototype	chr4	69375902	69381641	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114786.2	ENSG00000250612	17725	AC114786.4	ENSG00000268209	5939	None	None
HERVL_4q13.3a	HERV	HERVL	unknown	chr4	69527809	69535088	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UGT2B4	ENSG00000156096	1795	AC093829.1	ENSG00000251177	37303	None	None
ERVLE_4q13.3a	HERV	ERVLE	internal	chr4	69540740	69545098	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	UGT2B4	ENSG00000156096	14726	AC093829.1	ENSG00000251177	27293	None	None
MER41_4q13.3	HERV	MER41	unknown	chr4	69768435	69773984	+	coding	SULT1B1	protein_coding	ANTISENSE	ENSG00000173597	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV3_4q13.3a	HERV	HERV3	oneside	chr4	69823038	69824561	-	noncoding	AC108941.2	protein_coding	SENSE	ENSG00000284695	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_4q13.3	HERV	HERV9	prototype	chr4	69824563	69828660	+	noncoding	AC108941.2	protein_coding	ANTISENSE	ENSG00000284695	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:69824866-69824871
HERV3_4q13.3b	HERV	HERV3	oneside	chr4	69828661	69833104	-	noncoding	AC108941.2	protein_coding	SENSE	ENSG00000284695	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:69830595-69830908,chr4:69831767-69832040,chr4:69832758-69833078	chr4:69831855-69831868
ERVL_4q13.3a	HERV	ERVL	oneside	chr4	69865342	69868580	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SULT1E1	ENSG00000109193	5197	AC108941.1	ENSG00000251489	20297	None	None
MER4_4q13.3a	HERV	MER4	oneside	chr4	69868585	69873269	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SULT1E1	ENSG00000109193	8440	AC108941.1	ENSG00000251489	15608	None	None
ERVLE_4q13.3b	HERV	ERVLE	internal	chr4	69947660	69948730	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CSN2	ENSG00000135222	6526	CSN1S1	ENSG00000126545	1086	None	None
MER4B_4q13.3a	HERV	MER4B	oneside	chr4	70042053	70043769	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HTN1	ENSG00000126550	6669	HTN3	ENSG00000205649	5515	None	None
MER4B_4q13.3b	HERV	MER4B	oneside	chr4	70061471	70064962	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CSN1S2AP	ENSG00000234124	2424	HTN1	ENSG00000126550	2623	None	None
ERVLE_4q13.3c	HERV	ERVLE	internal	chr4	70394339	70395004	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OPRPN	ENSG00000171199	2927	SMR3B	ENSG00000171201	4095	None	None
ERVL_4q13.3b	HERV	ERVL	prototype	chr4	70485524	70487672	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AMTN	ENSG00000187689	30897	MUC7	ENSG00000171195	2527	None	None
HML6_4q13.3	HERV	HML6	prototype	chr4	70552467	70554689	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AMBN	ENSG00000178522	37567	AMTN	ENSG00000187689	19724	None	None
ERVLE_4q13.3d	HERV	ERVLE	internal	chr4	70609115	70612106	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ENAM	ENSG00000132464	16638	AMBN	ENSG00000178522	1827	None	None
ERVLB4_4q13.3	HERV	ERVLB4	oneside	chr4	70868693	70871040	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MOB1B	ENSG00000173542	31286	RNU6-891P	ENSG00000207007	16453	None	None
HERVH_4q13.3	HERV	HERVH	prototype	chr4	71031810	71037274	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DCK	ENSG00000156136	896	SLC4A4	ENSG00000080493	25393	None	None
MER4_4q13.3b	HERV	MER4	oneside	chr4	71636621	71638297	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC4A4	ENSG00000080493	64534	GC	ENSG00000145321	103399	None	None
HARLEQUIN_4q13.3	HERV	HARLEQUIN	prototype	chr4	71638298	71645983	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC4A4	ENSG00000080493	66211	GC	ENSG00000145321	95713	None	None
ERV316A3_4q13.3a	HERV	ERV316A3	oneside	chr4	71650206	71652465	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC4A4	ENSG00000080493	78119	GC	ENSG00000145321	89231	None	None
HML5_4q13.3	HERV	HML5	tandem*	chr4	71804110	71810377	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068721.1	ENSG00000248567	10928	GC	ENSG00000145321	69	None	None
MER4B_4q13.3c	HERV	MER4B	oneside	chr4	71855655	71861305	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPFFR2	ENSG00000056291	170499	AC068721.1	ENSG00000248567	31675	None	None
MER4B_4q13.3d	HERV	MER4B	oneside	chr4	71861601	71865827	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPFFR2	ENSG00000056291	165977	AC068721.1	ENSG00000248567	37621	None	None
MER101_4q13.3	HERV	MER101	oneside	chr4	72002457	72005968	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068721.1	ENSG00000248567	178477	NPFFR2	ENSG00000056291	25836	None	None
ERVLE_4q13.3e	HERV	ERVLE	internal	chr4	72058779	72060937	-	noncoding	NPFFR2	protein_coding	ANTISENSE	ENSG00000056291	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q13.3f	HERV	ERVLE	internal	chr4	72380086	72382130	+	noncoding	ADAMTS3	protein_coding	ANTISENSE	ENSG00000156140	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q13.3b	HERV	ERV316A3	internal	chr4	72670903	72671454	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADAMTS3	ENSG00000156140	101682	HNRNPA1P67	ENSG00000270665	135813	None	None
ERV316A3_4q13.3c	HERV	ERV316A3	internal	chr4	72685737	72686314	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADAMTS3	ENSG00000156140	116516	HNRNPA1P67	ENSG00000270665	120953	None	None
HERVW_4q13.3a	HERV	HERVW	oneside	chr4	72925576	72930782	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU4ATAC9P	ENSG00000252955	34396	HNRNPA1P67	ENSG00000270665	117384	None	None
HERVW_4q13.3b	HERV	HERVW	oneside	chr4	72930857	72933186	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU4ATAC9P	ENSG00000252955	31992	HNRNPA1P67	ENSG00000270665	122665	None	None
MER4B_4q13.3e	HERV	MER4B	oneside	chr4	73293238	73297019	+	noncoding	AC053527.2	lncRNA	SENSE	ENSG00000250220	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q13.3g	HERV	ERVLE	internal	chr4	73313544	73317374	+	noncoding	AC053527.2	lncRNA	SENSE	ENSG00000250220	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_4q13.3a	HERV	HML3	oneside	chr4	73357146	73360149	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108157.1	ENSG00000249976	19375	ALB	ENSG00000163631	36965	None	None
HML3_4q13.3b	HERV	HML3	oneside	chr4	73366253	73370272	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108157.1	ENSG00000249976	28482	ALB	ENSG00000163631	26842	None	None
ERV316A3_4q13.3e	HERV	ERV316A3	insert*	chr4	73657151	73659609	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RASSF6	ENSG00000169435	36520	UMLILO	ENSG00000228277	50693	None	None
HML4_4q13.3	HERV	HML4	prototype	chr4	73665456	73671857	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UMLILO	ENSG00000228277	38445	RASSF6	ENSG00000169435	44825	chr4:73668795-73668942	None
HUERSP2_4q13.3a	HERV	HUERSP2	oneside	chr4	73763231	73764647	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CXCL8	ENSG00000169429	19515	AC112518.1	ENSG00000249051	12989	None	None
HERVL_4q13.3b	HERV	HERVL	oneside	chr4	73764648	73768896	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC112518.1	ENSG00000249051	8740	CXCL8	ENSG00000169429	20932	None	None
HUERSP2_4q13.3b	HERV	HUERSP2	oneside	chr4	73768886	73771249	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CXCL8	ENSG00000169429	25170	AC112518.1	ENSG00000249051	6387	None	None
HERVK11_4q13.3	HERV	HERVK11	oneside	chr4	73949407	73954212	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PF4	ENSG00000163737	26599	CXCL1P1	ENSG00000250339	5083	None	None
MER4_4q13.3c	HERV	MER4	oneside	chr4	74063120	74065376	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPBPP2	ENSG00000248848	7721	AC093677.3	ENSG00000288019	11157	None	None
PRIMA41_4q13.3	HERV	PRIMA41	prototype	chr4	74082718	74093615	+	coding	AC093677.1	processed_pseudogene	ANTISENSE	ENSG00000251017	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:74092951-74092956
HERV4_4q13.3	HERV	HERV4	prototype	chr4	74433515	74440731	-	noncoding	AC021180.1	lncRNA	SENSE	ENSG00000250532	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr4:74433662-74433890	chr4:74440452-74440457
ERV316A3_4q13.3d	HERV	ERV316A3	oneside	chr4	75061690	75063481	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02562	ENSG00000260265	18221	PARM1	ENSG00000169116	11575	None	None
ERVLE_4q21.1a	HERV	ERVLE	internal	chr4	75361031	75363410	+	noncoding	AC025244.1,LINC02483,AC096759.1	lncRNA,lncRNA,lncRNA	ANTISENSE,SENSE,ANTISENSE	ENSG00000251185,ENSG00000251383,ENSG00000248646	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_4q21.1a	HERV	MER41	oneside	chr4	75374130	75375774	+	noncoding	AC096759.1	lncRNA	ANTISENSE	ENSG00000248646	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q21.1a	HERV	ERV316A3	internal	chr4	75530112	75530967	-	noncoding	THAP6	protein_coding	ANTISENSE	ENSG00000174796	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_4q21.1a	HERV	MER61	oneside	chr4	76230620	76234657	-	noncoding	SCARB2,FAM47E	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000138760,ENSG00000189157	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:76234509-76234549,chr4:76234495-76234506
ERVLE_4q21.1b	HERV	ERVLE	internal	chr4	76291860	76295260	-	noncoding	AC034139.1,FAM47E-STBD1	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000287401,ENSG00000272414	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q21.1c	HERV	ERVLE	internal	chr4	76461515	76462067	-	noncoding	SHROOM3	protein_coding	ANTISENSE	ENSG00000138771	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q21.1d	HERV	ERVLE	internal	chr4	77138715	77140716	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1187P	ENSG00000201641	9612	AC104771.1	ENSG00000271676	25257	None	None
ERV316A3_4q21.1b	HERV	ERV316A3	oneside	chr4	77206438	77207431	-	noncoding	CCNG2	protein_coding	ANTISENSE	ENSG00000138764	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q21.1c	HERV	ERV316A3	oneside	chr4	77237871	77239523	-	noncoding	CCNG2	protein_coding	ANTISENSE	ENSG00000138764	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q21.1d	HERV	ERV316A3	internal	chr4	77294830	77295457	-	noncoding	CCNG2	protein_coding	ANTISENSE	ENSG00000138764	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q21.1e	HERV	ERV316A3	oneside	chr4	77312798	77314180	-	noncoding	CCNG2	protein_coding	ANTISENSE	ENSG00000138764	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_4q21.1a	HERV	HUERSP3B	oneside	chr4	77329767	77332741	-	noncoding	CCNG2	protein_coding	ANTISENSE	ENSG00000138764	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_4q21.1b	HERV	HUERSP3B	oneside	chr4	77342765	77344431	-	noncoding	CCNG2	protein_coding	ANTISENSE	ENSG00000138764	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q21.1	HERV	HERVL	oneside	chr4	77362928	77365788	-	noncoding	CCNG2	protein_coding	ANTISENSE	ENSG00000138764	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q21.1f	HERV	ERV316A3	oneside	chr4	77382464	77384104	-	noncoding	CCNG2	protein_coding	ANTISENSE	ENSG00000138764	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_4q21.1	HERV	HML6	prototype	chr4	77392282	77400204	-	noncoding	CCNG2,AC092674.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000138764,ENSG00000249036	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q21.1g	HERV	ERV316A3	oneside	chr4	77408057	77409566	-	noncoding	CCNG2,AC092674.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000138764,ENSG00000249036	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q21.1h	HERV	ERV316A3	oneside	chr4	77419013	77420479	+	noncoding	CCNG2,AC092674.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000138764,ENSG00000249036	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q21.1a	HERV	ERVLB4	prototype	chr4	77428273	77433435	+	noncoding	CCNG2,AC092674.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000138764,ENSG00000249036	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q21.1b	HERV	ERVLB4	prototype	chr4	77438932	77443854	+	noncoding	AC092674.1	lncRNA	ANTISENSE	ENSG00000249036	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q21.1i	HERV	ERV316A3	internal	chr4	77453519	77454437	-	noncoding	AC092674.1	lncRNA	SENSE	ENSG00000249036	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q21.1j	HERV	ERV316A3	oneside	chr4	77479330	77482751	+	noncoding	AC092674.1	lncRNA	ANTISENSE	ENSG00000249036	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q21.1k	HERV	ERV316A3	oneside	chr4	77490147	77491130	-	noncoding	AC092674.1	lncRNA	SENSE	ENSG00000249036	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q21.1l	HERV	ERV316A3	internal	chr4	77491739	77492568	+	noncoding	AC092674.1	lncRNA	ANTISENSE	ENSG00000249036	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q21.1m	HERV	ERV316A3	oneside	chr4	77557268	77559538	-	noncoding	CXCL13	protein_coding	ANTISENSE	ENSG00000156234	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_4q21.1b	HERV	MER41	internal	chr4	77573676	77574676	+	noncoding	CXCL13	protein_coding	SENSE	ENSG00000156234	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_4q21.1b	HERV	MER61	oneside	chr4	77574705	77578797	+	noncoding	CXCL13	protein_coding	SENSE	ENSG00000156234	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_4q21.1	HERV	HERVL18	prototype	chr4	77630548	77637162	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104701.1	ENSG00000221711	65584	CXCL13	ENSG00000156234	18714	None	chr4:77636947-77636959
ERVLE_4q21.1e	HERV	ERVLE	internal	chr4	77705578	77706521	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104701.1	ENSG00000221711	2775	CNOT6L	ENSG00000138767	6866	None	None
ERV316A3_4q21.21a	HERV	ERV316A3	oneside	chr4	78031565	78036384	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114801.3	ENSG00000249072	22877	FRAS1	ENSG00000138759	20939	None	None
ERVLE_4q21.21a	HERV	ERVLE	internal	chr4	78041638	78042241	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FRAS1	ENSG00000138759	15082	AC114801.3	ENSG00000249072	32950	None	None
HERVK11_4q21.21a	HERV	HERVK11	oneside	chr4	78328665	78331122	+	noncoding	FRAS1	protein_coding	SENSE	ENSG00000138759	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_4q21.21	HERV	MER41	internal	chr4	78694846	78703208	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC098818.1	ENSG00000239793	65291	AC112253.2	ENSG00000287632	3175	None	None
HERVH_4q21.21a	HERV	HERVH	prototype	chr4	78713842	78719721	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC098818.1	ENSG00000239793	48778	AC112253.2	ENSG00000287632	22171	None	None
ERVLE_4q21.21b	HERV	ERVLE	internal	chr4	79117801	79118348	-	noncoding	LINC01088	lncRNA	ANTISENSE	ENSG00000249307	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q21.21c	HERV	ERVLE	internal	chr4	79239261	79241863	+	noncoding	LINC01088,NAA11	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000249307,ENSG00000156269	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_4q21.21	HERV	HERVIP10F	oneside	chr4	79276374	79277939	+	noncoding	LINC01088,NAA11	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000249307,ENSG00000156269	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q21.21b	HERV	HERVH	prototype	chr4	79553970	79559709	-	noncoding	LINC00989	lncRNA	ANTISENSE	ENSG00000250334	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11_4q21.21b	HERV	HERVK11	oneside	chr4	79824403	79827343	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PCAT4	ENSG00000251321	128	LINC02469	ENSG00000248408	127566	None	None
ERV316A3_4q21.21b	HERV	ERV316A3	oneside	chr4	79848602	79850304	+	noncoding	PCAT4	lncRNA	SENSE	ENSG00000251321	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q21.21	HERV	HERVL	prototype	chr4	80174515	80180735	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021127.1	ENSG00000248719	1902	RPSAP39	ENSG00000244002	12504	None	None
ERV316A3_4q21.21c	HERV	ERV316A3	prototype	chr4	80368903	80375923	-	noncoding	CFAP299	protein_coding	ANTISENSE	ENSG00000197826	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q21.21d	HERV	ERVLE	internal	chr4	80793516	80799041	-	noncoding	CFAP299	protein_coding	ANTISENSE	ENSG00000197826	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q21.22	HERV	ERVLE	internal	chr4	82384061	82385560	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC124016.2	ENSG00000272677	34	IGBP1P4	ENSG00000250325	16018	None	None
HERVW_4q21.22	HERV	HERVW	prototype	chr4	82473317	82480053	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ENOPH1	ENSG00000145293	12140	TMEM150C	ENSG00000249242	3117	None	None
HERVL40_4q21.22	HERV	HERVL40	oneside	chr4	82989313	82991013	-	noncoding	LIN54	protein_coding	SENSE	ENSG00000189308	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_4q21.22	HERV	HUERSP1	internal	chr4	83096768	83099235	+	noncoding	PLAC8	protein_coding	ANTISENSE	ENSG00000145287	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_4q21.22a	HERV	MER34B	internal	chr4	83183561	83184563	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114781.2	ENSG00000250057	48949	PLAC8	ENSG00000145287	46486	None	None
MER34B_4q21.22b	HERV	MER34B	internal	chr4	83187629	83190189	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114781.2	ENSG00000250057	43323	PLAC8	ENSG00000145287	50554	None	chr4:83189639-83189689
HERVFH19_4q21.23	HERV	HERVFH19	oneside	chr4	83202784	83208165	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PLAC8	ENSG00000145287	65709	AC114781.2	ENSG00000250057	25347	None	None
ERVLE_4q21.23a	HERV	ERVLE	internal	chr4	83250518	83251814	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	COQ2	ENSG00000173085	9722	AC114781.1	ENSG00000248401	2312	chr4:83251291-83251386	chr4:83251344-83251386
HERVH48_4q21.23	HERV	HERVH48	prototype	chr4	83504968	83510531	-	noncoding	ABRAXAS1	protein_coding	SENSE	ENSG00000163322	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q21.23a	HERV	ERVLB4	oneside	chr4	83514280	83517627	-	noncoding	ABRAXAS1	protein_coding	SENSE	ENSG00000163322	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q21.23b	HERV	ERVLB4	oneside	chr4	83528777	83530913	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ABRAXAS1	ENSG00000163322	5429	GPAT3	ENSG00000138678	5001	None	None
ERVL_4q21.23	HERV	ERVL	oneside	chr4	83751140	83753083	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021192.2	ENSG00000249171	19385	AC079160.1	ENSG00000250546	43353	None	None
HERVL18_4q21.23	HERV	HERVL18	prototype	chr4	83962401	83965415	-	noncoding	AC079160.1	lncRNA	SENSE	ENSG00000250546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_4q21.23a	HERV	MER61	prototype	chr4	83989433	83994396	+	noncoding	AC079160.1	lncRNA	ANTISENSE	ENSG00000250546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q21.23b	HERV	ERVLE	internal	chr4	84227635	84228771	-	noncoding	AC079160.1	lncRNA	SENSE	ENSG00000250546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q21.23c	HERV	ERVLE	internal	chr4	84945001	84946272	+	noncoding	WDFY3	protein_coding	ANTISENSE	ENSG00000163625	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_4q21.23	HERV	HML5	prototype	chr4	85125447	85129232	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC097488.1	ENSG00000248725	116925	RN7SKP48	ENSG00000201901	24624	None	None
MER61_4q21.23b	HERV	MER61	internal	chr4	85318624	85320363	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARHGAP24	ENSG00000138639	154787	AC097488.1	ENSG00000248725	71712	None	None
HUERSP2_4q21.23	HERV	HUERSP2	internal	chr4	85320461	85320802	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARHGAP24	ENSG00000138639	154348	AC097488.1	ENSG00000248725	73549	None	None
HERVW_4q21.23	HERV	HERVW	prototype	chr4	85352126	85355394	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARHGAP24	ENSG00000138639	119756	AC097488.1	ENSG00000248725	105214	None	None
ERV316A3_4q21.3	HERV	ERV316A3	oneside	chr4	86432676	86433506	+	noncoding	MAPK10	polymorphic_pseudogene	ANTISENSE	ENSG00000109339	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_4q21.3	HERV	HML3	prototype	chr4	86460524	86466555	+	noncoding	MAPK10	polymorphic_pseudogene	ANTISENSE	ENSG00000109339	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q21.3	HERV	HERVH	prototype	chr4	86474771	86480520	+	noncoding	MAPK10	polymorphic_pseudogene	ANTISENSE	ENSG00000109339	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q21.3	HERV	ERVLE	internal	chr4	86916104	86921518	+	noncoding	AC093827.5	protein_coding	ANTISENSE	ENSG00000285458	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:86918620-86919072	chr4:86916363-86916364
HERVK11_4q22.1	HERV	HERVK11	oneside	chr4	87293570	87295792	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR5705	ENSG00000263981	4703	AC108516.1	ENSG00000250572	26748	None	None
PABLA_4q22.1	HERV	PABLA	internal	chr4	87361967	87365866	+	noncoding	HSD17B11	protein_coding	ANTISENSE	ENSG00000198189	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:87364267-87364270
MER41_4q22.1a	HERV	MER41	oneside	chr4	87366157	87369097	+	noncoding	HSD17B11	protein_coding	ANTISENSE	ENSG00000198189	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_4q22.1	HERV	HML1	prototype	chr4	87402106	87408795	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC112250.1	ENSG00000249262	1849	HSD17B11	ENSG00000198189	10918	None	None
ERV316A3_4q22.1a	HERV	ERV316A3	internal	chr4	87560828	87561948	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093895.2	ENSG00000249001	6087	SPARCL1	ENSG00000152583	29767	None	None
ERVLE_4q22.1a	HERV	ERVLE	internal	chr4	87693572	87694567	-	noncoding	AC093895.2	lncRNA	SENSE	ENSG00000249001	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q22.1a	HERV	HERVH	oneside	chr4	87921803	87925995	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSP90AB3P	ENSG00000183199	27788	AC131944.1	ENSG00000286618	48390	None	None
ERVLE_4q22.1b	HERV	ERVLE	internal	chr4	87926069	87926643	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSP90AB3P	ENSG00000183199	32054	AC131944.1	ENSG00000286618	47742	None	None
HERVH_4q22.1b	HERV	HERVH	oneside	chr4	87935922	87937547	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC131944.1	ENSG00000286618	36838	HSP90AB3P	ENSG00000183199	41907	None	None
ERVLE_4q22.1c	HERV	ERVLE	internal	chr4	87937638	87939311	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC131944.1	ENSG00000286618	35074	HSP90AB3P	ENSG00000183199	43623	None	None
MER41_4q22.1b	HERV	MER41	oneside	chr4	87959392	87960133	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSP90AB3P	ENSG00000183199	65377	AC131944.1	ENSG00000286618	14252	None	None
HERVH_4q22.1c	HERV	HERVH	prototype	chr4	88152327	88155548	-	noncoding	ABCG2	protein_coding	SENSE	ENSG00000118777	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q22.1d	HERV	ERVLE	internal	chr4	88216042	88217357	+	noncoding	ABCG2	protein_coding	ANTISENSE	ENSG00000118777	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q22.1d	HERV	HERVH	oneside	chr4	88344162	88349212	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107067.3	ENSG00000287181	3010	PPM1K-DT	ENSG00000246375	12741	None	None
HERV4_4q22.1	HERV	HERV4	prototype	chr4	88442739	88453401	+	noncoding	HERC6	protein_coding	SENSE	ENSG00000138642	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr4:88447307-88447603	None
HERVL18_4q22.1	HERV	HERVL18	prototype	chr4	89104504	89108711	+	noncoding	FAM13A	protein_coding	ANTISENSE	ENSG00000138640	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q22.1b	HERV	ERV316A3	oneside	chr4	89606800	89607915	-	noncoding	AC093866.1,AC097478.4	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000251095,ENSG00000288563	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q22.1e	HERV	HERVH	prototype	chr4	89964793	89970429	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105445.1	ENSG00000287239	24794	MMRN1	ENSG00000138722	10164	None	None
ERV316A3_4q22.1c	HERV	ERV316A3	oneside	chr4	90083464	90085368	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCSER1	ENSG00000184305	42167	AC105445.1	ENSG00000287239	84055	None	chr4:90084311-90084332
ERVLB4_4q22.1a	HERV	ERVLB4	oneside	chr4	90115153	90117073	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105445.1	ENSG00000287239	115744	CCSER1	ENSG00000184305	10462	None	None
HERVL40_4q22.1	HERV	HERVL40	prototype	chr4	90373685	90377232	+	noncoding	CCSER1	protein_coding	SENSE	ENSG00000184305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVEA_4q22.1	HERV	HERVEA	oneside	chr4	91088998	91097079	-	coding	CCSER1	protein_coding	ANTISENSE	ENSG00000184305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_4q22.1a	HERV	HML3	prototype	chr4	91180683	91187026	-	noncoding	CCSER1	protein_coding	ANTISENSE	ENSG00000184305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_4q22.1a	HERV	HARLEQUIN	prototype	chr4	91353118	91359437	-	coding	CCSER1	protein_coding	ANTISENSE	ENSG00000184305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:91358410-91358412
HERVH_4q22.1f	HERV	HERVH	prototype	chr4	91623640	91629699	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC110774.1	ENSG00000279013	18348	KRT19P6	ENSG00000249891	255347	None	None
HERVH_4q22.1g	HERV	HERVH	prototype	chr4	91654602	91660568	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT19P6	ENSG00000249891	224478	AC110774.1	ENSG00000279013	49310	None	None
HML3_4q22.1b	HERV	HML3	prototype	chr4	91696154	91702003	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	KRT19P6	ENSG00000249891	183043	AC110774.1	ENSG00000279013	90862	None	None
ERVL_4q22.1	HERV	ERVL	internal	chr4	91846445	91847936	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC110774.1	ENSG00000279013	241153	KRT19P6	ENSG00000249891	37110	None	None
ERV316A3_4q22.1d	HERV	ERV316A3	oneside	chr4	91848039	91849281	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC110774.1	ENSG00000279013	242747	KRT19P6	ENSG00000249891	35765	None	None
HERVL_4q22.1a	HERV	HERVL	prototype	chr4	91888713	91894977	+	noncoding	AC093810.1	lncRNA	SENSE	ENSG00000249052	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q22.1e	HERV	ERVLE	internal	chr4	91906293	91907174	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093810.1	ENSG00000249052	1958	PMPCAP1	ENSG00000248817	275303	None	None
ERVLB4_4q22.1b	HERV	ERVLB4	oneside	chr4	91957036	91960969	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093810.1	ENSG00000249052	52701	PMPCAP1	ENSG00000248817	221508	None	None
ERV316A3_4q22.1e	HERV	ERV316A3	internal	chr4	91976444	91977413	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093810.1	ENSG00000249052	72109	PMPCAP1	ENSG00000248817	205064	None	None
HERVH_4q22.1h	HERV	HERVH	prototype	chr4	92025772	92031162	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093810.1	ENSG00000249052	121437	PMPCAP1	ENSG00000248817	151315	None	None
MER4_4q22.1	HERV	MER4	oneside	chr4	92031194	92037894	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PMPCAP1	ENSG00000248817	144583	AC093810.1	ENSG00000249052	126859	None	None
HARLEQUIN_4q22.1b	HERV	HARLEQUIN	prototype	chr4	92038430	92046521	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PMPCAP1	ENSG00000248817	135956	AC093810.1	ENSG00000249052	134095	None	None
MER41_4q22.1c	HERV	MER41	prototype	chr4	92088882	92091747	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PMPCAP1	ENSG00000248817	90730	AC093810.1	ENSG00000249052	184547	None	None
ERVLB4_4q22.1c	HERV	ERVLB4	oneside	chr4	92141169	92142848	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093810.1	ENSG00000249052	236834	PMPCAP1	ENSG00000248817	39629	None	None
HERVH_4q22.1i	HERV	HERVH	prototype	chr4	92271492	92277648	-	noncoding	LNCPRESS2	lncRNA	SENSE	ENSG00000249152	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:92276664-92276668
HERVH_4q22.1j	HERV	HERVH	prototype	chr4	92438954	92444654	-	noncoding	GRID2	protein_coding	ANTISENSE	ENSG00000152208	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:92444257-92444263
HERVL_4q22.1b	HERV	HERVL	oneside	chr4	92519615	92520954	-	noncoding	GRID2	protein_coding	ANTISENSE	ENSG00000152208	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q22.1d	HERV	ERVLB4	prototype	chr4	92649155	92652370	-	noncoding	GRID2	protein_coding	ANTISENSE	ENSG00000152208	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_4q22.2	HERV	HERVL40	internal	chr4	93091489	93094001	-	noncoding	GRID2	protein_coding	ANTISENSE	ENSG00000152208	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q22.2	HERV	ERVLE	internal	chr4	93814139	93819147	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRID2	ENSG00000152208	3982	RNA5SP164	ENSG00000252342	1024	None	None
HERVH_4q22.2	HERV	HERVH	prototype	chr4	94084647	94089891	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096746.1	ENSG00000246541	27901	ATOH1	ENSG00000172238	253681	None	None
HERVL_4q22.2	HERV	HERVL	internal	chr4	94152117	94159527	+	noncoding	AC096746.1	lncRNA	ANTISENSE	ENSG00000246541	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q22.3a	HERV	ERVLE	internal	chr4	94241576	94247399	-	noncoding	SMARCAD1	protein_coding	ANTISENSE	ENSG00000163104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q22.3a	HERV	HERVH	prototype	chr4	94293297	94298570	-	noncoding	HPGDS	protein_coding	SENSE	ENSG00000163106	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr4:94294055-94294067
HERVH_4q22.3b	HERV	HERVH	prototype	chr4	94382925	94389260	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PDLIM5	ENSG00000163110	62597	AC109925.1	ENSG00000241103	12762	None	None
ERV316A3_4q22.3a	HERV	ERV316A3	internal	chr4	94785926	94788613	+	noncoding	BMPR1B	protein_coding	SENSE	ENSG00000138696	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q22.3b	HERV	ERVLE	internal	chr4	95660439	95661378	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PDHA2	ENSG00000163114	178715	RPL30P6	ENSG00000242936	15146	None	None
ERVLB4_4q22.3a	HERV	ERVLB4	oneside	chr4	95714591	95720334	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PDHA2	ENSG00000163114	119759	RPL30P6	ENSG00000242936	69298	None	None
MER4_4q22.3	HERV	MER4	prototype	chr4	95924933	95933456	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1059P	ENSG00000200622	56169	RNU6-34P	ENSG00000201744	218841	None	None
ERV316A3_4q22.3b	HERV	ERV316A3	oneside	chr4	95953828	95956254	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1059P	ENSG00000200622	85064	RNU6-34P	ENSG00000201744	196043	None	None
ERVLE_4q22.3c	HERV	ERVLE	internal	chr4	96020824	96025529	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1059P	ENSG00000200622	152060	RNU6-34P	ENSG00000201744	126768	None	None
ERVLB4_4q22.3b	HERV	ERVLB4	oneside	chr4	96322381	96327915	+	noncoding	LINC02267	lncRNA	SENSE	ENSG00000248510	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q22.3c	HERV	ERV316A3	internal	chr4	96564945	96565656	+	noncoding	LINC02267	lncRNA	SENSE	ENSG00000248510	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q22.3a	HERV	HERVL	oneside	chr4	96925105	96930978	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	COX7A2P2	ENSG00000236764	22055	AC108515.1	ENSG00000253170	189723	None	None
HML3_4q22.3a	HERV	HML3	prototype	chr4	97096906	97102604	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108515.1	ENSG00000253170	18097	COX7A2P2	ENSG00000236764	193856	None	None
HERVH_4q22.3c	HERV	HERVH	prototype	chr4	97136992	97140080	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STPG2	ENSG00000163116	44013	AC108515.1	ENSG00000253170	1933	None	None
ERV316A3_4q22.3d	HERV	ERV316A3	prototype	chr4	97224847	97228219	-	noncoding	STPG2	protein_coding	SENSE	ENSG00000163116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q22.3b	HERV	HERVL	prototype	chr4	97379684	97385020	+	noncoding	STPG2,AC034154.1,STPG2-AS1	protein_coding,lncRNA,lncRNA	ANTISENSE,ANTISENSE,SENSE	ENSG00000163116,ENSG00000254044,ENSG00000251620	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_4q22.3b	HERV	HML3	oneside	chr4	97696877	97698124	+	noncoding	STPG2	protein_coding	ANTISENSE	ENSG00000163116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q22.3c	HERV	HERVL	oneside	chr4	97698128	97704229	-	noncoding	STPG2	protein_coding	SENSE	ENSG00000163116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q22.3c	HERV	ERVLB4	oneside	chr4	97814976	97816698	+	noncoding	STPG2	protein_coding	ANTISENSE	ENSG00000163116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_4q22.3	HERV	MER41	oneside	chr4	97823518	97824301	+	noncoding	STPG2	protein_coding	ANTISENSE	ENSG00000163116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_4q22.3	HERV	PABLA	internal	chr4	97824370	97828086	+	noncoding	STPG2	protein_coding	ANTISENSE	ENSG00000163116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q23a	HERV	ERVLE	internal	chr4	97919871	97920801	+	noncoding	STPG2	protein_coding	ANTISENSE	ENSG00000163116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q23b	HERV	ERVLE	internal	chr4	98029625	98030409	-	noncoding	STPG2	protein_coding	SENSE	ENSG00000163116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_4q23	HERV	HUERSP1	prototype	chr4	98155789	98164542	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STPG2	ENSG00000163116	12313	AC019077.1	ENSG00000214559	87146	None	None
MER101_4q23	HERV	MER101	oneside	chr4	98328796	98335519	-	noncoding	RAP1GDS1	protein_coding	ANTISENSE	ENSG00000138698	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_4q23	HERV	HERVL18	oneside	chr4	98664913	98667375	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114811.1	ENSG00000249764	46429	AC114811.2	ENSG00000260641	363	None	None
MER41_4q23a	HERV	MER41	prototype	chr4	98812930	98818680	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BTF3P13	ENSG00000227118	71699	EIF4E	ENSG00000151247	53004	None	None
HERVL40_4q23	HERV	HERVL40	oneside	chr4	98828542	98829640	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EIF4E	ENSG00000151247	42044	BTF3P13	ENSG00000227118	87311	None	None
MER41_4q23b	HERV	MER41	prototype	chr4	98844401	98849355	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EIF4E	ENSG00000151247	22329	BTF3P13	ENSG00000227118	103170	None	None
ERVLE_4q23c	HERV	ERVLE	internal	chr4	99103433	99104536	+	noncoding	AP002026.1	lncRNA	SENSE	ENSG00000246090	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_4q23	HERV	HERVW	prototype	chr4	99104739	99109954	-	noncoding	AP002026.1	lncRNA	ANTISENSE	ENSG00000246090	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q23d	HERV	ERVLE	internal	chr4	99110478	99112317	+	noncoding	AP002026.1	lncRNA	SENSE	ENSG00000246090	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_4q23a	HERV	MER4	internal	chr4	99149654	99152028	+	noncoding	AP002026.1,ADH4	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000246090,ENSG00000198099	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_4q23b	HERV	MER4	internal	chr4	99152149	99155660	+	noncoding	AP002026.1,ADH4	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000246090,ENSG00000198099	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_4q23c	HERV	MER41	oneside	chr4	99165749	99167336	-	noncoding	AP002026.1	lncRNA	ANTISENSE	ENSG00000246090	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_4q23a	HERV	HML3	prototype	chr4	99187128	99191541	-	noncoding	AP002026.1	lncRNA	ANTISENSE	ENSG00000246090	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q23a	HERV	HERVL	internal	chr4	99192246	99194146	-	noncoding	AP002026.1	lncRNA	ANTISENSE	ENSG00000246090	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q23b	HERV	HERVL	oneside	chr4	99196812	99199104	-	noncoding	AP002026.1	lncRNA	ANTISENSE	ENSG00000246090	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_4q23b	HERV	HML3	prototype	chr4	99367055	99373128	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADH1B	ENSG00000196616	14295	ADH7	ENSG00000196344	39133	None	None
ERVLB4_4q23a	HERV	ERVLB4	internal	chr4	99478069	99478890	+	noncoding	AP001960.1	unprocessed_pseudogene	ANTISENSE	ENSG00000250300	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_4q23c	HERV	HML3	prototype	chr4	99486388	99492124	-	coding	AP001960.1	unprocessed_pseudogene	SENSE	ENSG00000250300	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_4q23d	HERV	MER41	prototype	chr4	99726123	99734925	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DAPP1	ENSG00000070190	81902	C4orf54	ENSG00000248713	71475	None	None
ERVLB4_4q23b	HERV	ERVLB4	oneside	chr4	99875673	99878359	+	noncoding	LAMTOR3	protein_coding	ANTISENSE	ENSG00000109270	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q23c	HERV	HERVL	prototype	chr4	100027062	100033620	-	noncoding	H2AZ1-DT	lncRNA	ANTISENSE	ENSG00000245322	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_4q24a	HERV	MER4	oneside	chr4	100229779	100233932	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EMCN	ENSG00000164035	161409	AP001961.1	ENSG00000249710	14274	None	None
MER4_4q24b	HERV	MER4	internal	chr4	100234176	100235567	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EMCN	ENSG00000164035	159774	AP001961.1	ENSG00000249710	18671	None	None
PRIMA4_4q24	HERV	PRIMA4	internal	chr4	100235572	100236528	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EMCN	ENSG00000164035	158813	AP001961.1	ENSG00000249710	20067	None	None
ERVLB4_4q24a	HERV	ERVLB4	oneside	chr4	100320884	100323094	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001961.1	ENSG00000249710	105379	EMCN	ENSG00000164035	72247	None	None
ERVLE_4q24a	HERV	ERVLE	internal	chr4	100330081	100330805	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001961.1	ENSG00000249710	114576	EMCN	ENSG00000164035	64536	None	None
ERVLE_4q24b	HERV	ERVLE	internal	chr4	100338413	100340350	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001961.1	ENSG00000249710	122908	EMCN	ENSG00000164035	54991	None	None
ERV316A3_4q24a	HERV	ERV316A3	internal	chr4	100595473	100596210	+	noncoding	EMCN	protein_coding	ANTISENSE	ENSG00000164035	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_4q24a	HERV	HUERSP3B	oneside	chr4	100620286	100623844	-	noncoding	EMCN	protein_coding	SENSE	ENSG00000164035	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q24b	HERV	ERVLB4	unknown	chr4	100630498	100634574	-	noncoding	EMCN	protein_coding	SENSE	ENSG00000164035	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q24c	HERV	ERVLB4	oneside	chr4	100641378	100642957	-	noncoding	EMCN	protein_coding	SENSE	ENSG00000164035	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_4q24c	HERV	MER4	internal	chr4	100748048	100750430	+	noncoding	EMCN	protein_coding	ANTISENSE	ENSG00000164035	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q24b	HERV	ERV316A3	oneside	chr4	100879021	100881653	+	noncoding	EMCN	protein_coding	ANTISENSE	ENSG00000164035	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:100880113-100880135
HERVH_4q24a	HERV	HERVH	prototype	chr4	100991693	100997475	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPP3CA	ENSG00000138814	25934	EMCN	ENSG00000164035	111567	None	None
ERVLE_4q24c	HERV	ERVLE	internal	chr4	101468653	101471863	+	noncoding	BANK1	protein_coding	SENSE	ENSG00000153064	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q24d	HERV	ERVLE	internal	chr4	101518613	101520082	+	noncoding	BANK1	protein_coding	SENSE	ENSG00000153064	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q24a	HERV	HERVL	oneside	chr4	101615062	101620297	-	noncoding	BANK1	protein_coding	ANTISENSE	ENSG00000153064	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q24b	HERV	HERVL	internal	chr4	101757207	101758091	+	noncoding	BANK1	protein_coding	SENSE	ENSG00000153064	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q24d	HERV	ERVLB4	oneside	chr4	101775473	101780214	-	noncoding	BANK1	protein_coding	ANTISENSE	ENSG00000153064	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q24e	HERV	ERVLB4	oneside	chr4	101780277	101783115	-	noncoding	BANK1	protein_coding	ANTISENSE	ENSG00000153064	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q24e	HERV	ERVLE	internal	chr4	101816468	101820290	-	noncoding	BANK1	protein_coding	ANTISENSE	ENSG00000153064	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_4q24a	HERV	HML3	internal	chr4	101902727	101906029	-	noncoding	BANK1	protein_coding	ANTISENSE	ENSG00000153064	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_4q24b	HERV	HML3	oneside	chr4	101906099	101907187	-	noncoding	BANK1	protein_coding	ANTISENSE	ENSG00000153064	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q24f	HERV	ERVLE	oneside	chr4	102185856	102188859	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC39A8	ENSG00000138821	62182	BANK1	ENSG00000153064	111044	None	None
ERVLE_4q24g	HERV	ERVLE	internal	chr4	102271200	102271959	+	noncoding	SLC39A8	protein_coding	ANTISENSE	ENSG00000138821	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:102271319-102271339
HERVL_4q24c	HERV	HERVL	prototype	chr4	102394255	102397381	+	noncoding	SLC39A8	protein_coding	ANTISENSE	ENSG00000138821	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q24d	HERV	HERVL	oneside	chr4	102741898	102747566	-	noncoding	MANBA	protein_coding	SENSE	ENSG00000109323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q24h	HERV	ERVLE	internal	chr4	102779767	102780844	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MANBA	ENSG00000109323	18773	UBE2D3	ENSG00000109332	13539	None	None
ERVLE_4q24i	HERV	ERVLE	internal	chr4	102843628	102846283	-	noncoding	UBE2D3,UBE2D3-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000109332,ENSG00000246560	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q24f	HERV	ERVLB4	oneside	chr4	103101908	103104683	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BDH2	ENSG00000164039	2038	CENPE	ENSG00000138778	666	None	None
HARLEQUIN_4q24	HERV	HARLEQUIN	prototype	chr4	103223627	103231452	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CENPE	ENSG00000138778	25182	LINC02428	ENSG00000248740	24370	None	None
ERVLB4_4q24g	HERV	ERVLB4	oneside	chr4	103270070	103278923	-	noncoding	LINC02428	lncRNA	ANTISENSE	ENSG00000248740	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_4q24a	HERV	HERVL18	prototype	chr4	103546137	103547472	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105460.2	ENSG00000251577	1273	LINC02428	ENSG00000248740	91470	None	None
HERVH_4q24b	HERV	HERVH	prototype	chr4	103553770	103559474	-	noncoding	AC105460.2,AC105460.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000251577,ENSG00000250920	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL18_4q24b	HERV	HERVL18	oneside	chr4	103751779	103755259	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TACR3	ENSG00000169836	31794	AC004047.1	ENSG00000286291	116631	None	None
HUERSP3B_4q24b	HERV	HUERSP3B	oneside	chr4	103784819	103792426	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TACR3	ENSG00000169836	64834	AC004047.1	ENSG00000286291	79464	None	chr4:103785261-103785268
ERVLE_4q24j	HERV	ERVLE	internal	chr4	103854566	103856263	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TACR3	ENSG00000169836	134581	AC004047.1	ENSG00000286291	15627	None	None
HERVH_4q24c	HERV	HERVH	prototype	chr4	103941268	103947029	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-635P	ENSG00000252460	16627	LINC02503	ENSG00000249614	14587	None	None
MER4_4q24d	HERV	MER4	prototype	chr4	103947033	103953782	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-635P	ENSG00000252460	22392	LINC02503	ENSG00000249614	7834	None	None
HERV4_4q24a	HERV	HERV4	internal	chr4	103972228	103974714	+	noncoding	LINC02503	lncRNA	SENSE	ENSG00000249614	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV4_4q24b	HERV	HERV4	oneside	chr4	103977803	103979201	+	noncoding	LINC02503	lncRNA	SENSE	ENSG00000249614	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q24k	HERV	ERVLE	internal	chr4	104044757	104045753	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02503	ENSG00000249614	7214	AC004052.1	ENSG00000251170	184627	None	None
ERV316A3_4q24c	HERV	ERV316A3	prototype	chr4	104453698	104455379	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004052.1	ENSG00000251170	42663	CXXC4	ENSG00000168772	12929	None	None
ERV316A3_4q24d	HERV	ERV316A3	prototype	chr4	104510872	104513960	+	noncoding	CXXC4-AS1	lncRNA	SENSE	ENSG00000245384	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q24e	HERV	ERV316A3	oneside	chr4	104622676	104624817	+	noncoding	CXXC4-AS1	lncRNA	SENSE	ENSG00000245384	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q24f	HERV	ERV316A3	oneside	chr4	104769699	104771125	+	noncoding	AC004053.1	lncRNA	ANTISENSE	ENSG00000248242	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q24g	HERV	ERV316A3	internal	chr4	105042988	105044163	-	noncoding	AC096577.1	lncRNA	ANTISENSE	ENSG00000248373	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q24h	HERV	ERV316A3	oneside	chr4	105064382	105065605	-	noncoding	AC096577.1	lncRNA	ANTISENSE	ENSG00000248373	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q24l	HERV	ERVLE	internal	chr4	105092250	105094260	+	noncoding	AC096577.1	lncRNA	SENSE	ENSG00000248373	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_4q24	HERV	HERVW	oneside	chr4	105487789	105489200	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EEF1A1P9	ENSG00000249264	1709	AC004066.1	ENSG00000216425	37396	None	None
HML5_4q24	HERV	HML5	prototype	chr4	106109837	106114668	+	noncoding	TBCK	protein_coding	ANTISENSE	ENSG00000145348	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q24i	HERV	ERV316A3	oneside	chr4	106630691	106632714	+	noncoding	AC092445.1	lncRNA	SENSE	ENSG00000286147	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q25a	HERV	ERVLE	internal	chr4	106843101	106846945	-	noncoding	AC092445.1	lncRNA	ANTISENSE	ENSG00000286147	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q25b	HERV	ERVLE	prototype	chr4	107263882	107266484	+	noncoding	DKK2,AC104663.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000155011,ENSG00000251081	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q25a	HERV	HERVH	prototype	chr4	107290579	107295851	-	noncoding	AC104663.1	lncRNA	ANTISENSE	ENSG00000251081	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_4q25	HERV	HML1	prototype	chr4	107328005	107334793	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104663.1	ENSG00000251081	26135	RNU6-551P	ENSG00000252470	100325	None	None
HERVI_4q25	HERV	HERVI	prototype	chr4	107379534	107388564	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104663.1	ENSG00000251081	77664	RNU6-551P	ENSG00000252470	46554	None	None
ERVL_4q25	HERV	ERVL	oneside	chr4	107395803	107397158	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104663.1	ENSG00000251081	93933	RNU6-551P	ENSG00000252470	37960	None	None
HERVIP10FH_4q25	HERV	HERVIP10FH	prototype	chr4	107413454	107420003	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104663.1	ENSG00000251081	111584	RNU6-551P	ENSG00000252470	15115	None	None
ERVLE_4q25c	HERV	ERVLE	internal	chr4	107470891	107471534	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-551P	ENSG00000252470	35671	PAPSS1	ENSG00000138801	118742	None	None
MER61_4q25	HERV	MER61	oneside	chr4	107586249	107590513	-	noncoding	PAPSS1	protein_coding	SENSE	ENSG00000138801	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q25a	HERV	HERVL	prototype	chr4	107722789	107731396	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SGMS2	ENSG00000164023	93167	PAPSS1	ENSG00000138801	2555	None	None
PABLB_4q25	HERV	PABLB	prototype	chr4	107733279	107741538	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PAPSS1	ENSG00000138801	13045	SGMS2	ENSG00000164023	83025	None	None
MER4_4q25a	HERV	MER4	oneside	chr4	107883818	107884951	+	noncoding	SGMS2,AC096564.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000164023,ENSG00000245293	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_4q25b	HERV	MER4	oneside	chr4	107886507	107892905	-	noncoding	SGMS2,AC096564.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000164023,ENSG00000245293	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q25a	HERV	ERV316A3	oneside	chr4	108321520	108325972	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LEF1-AS1	ENSG00000232021	63483	RPSAP34	ENSG00000239939	81871	None	None
ERV316A3_4q25b	HERV	ERV316A3	internal	chr4	108326179	108326828	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LEF1-AS1	ENSG00000232021	68142	RPSAP34	ENSG00000239939	81015	None	None
ERVLE_4q25d	HERV	ERVLE	oneside	chr4	108643121	108647246	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OSTC	ENSG00000198856	3339	RPL34	ENSG00000109475	12709	None	None
HERVH_4q25b	HERV	HERVH	oneside	chr4	108710149	108714851	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107071.1	ENSG00000286136	31275	ETNPPL	ENSG00000164089	27197	None	None
HERVFRD_4q25	HERV	HERVFRD	internal	chr4	108725315	108726642	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ETNPPL	ENSG00000164089	15406	AC107071.1	ENSG00000286136	46441	None	None
ERV316A3_4q25c	HERV	ERV316A3	internal	chr4	108737438	108740114	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107071.1	ENSG00000286136	58564	ETNPPL	ENSG00000164089	1934	None	None
ERVLB4_4q25a	HERV	ERVLB4	prototype	chr4	109250330	109253637	-	noncoding	COL25A1	protein_coding	SENSE	ENSG00000188517	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q25e	HERV	ERVLE	internal	chr4	109546905	109549504	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SEC24B	ENSG00000138802	6009	SETP20	ENSG00000225094	3739	None	None
ERV316A3_4q25d	HERV	ERV316A3	oneside	chr4	109802583	109804649	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC126283.1	ENSG00000272795	10398	CFI	ENSG00000205403	404	None	None
ERV316A3_4q25e	HERV	ERV316A3	internal	chr4	109805023	109806413	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC126283.1	ENSG00000272795	8634	CFI	ENSG00000205403	2844	None	None
HERVK11D_4q25	HERV	HERVK11D	prototype	chr4	109855911	109859937	-	noncoding	LRIT3	protein_coding	ANTISENSE	ENSG00000183423	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH21_4q25	HERV	HERVFH21	prototype	chr4	110202368	110203765	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSBP1P2	ENSG00000166530	48106	ELOVL6	ENSG00000170522	3169	None	None
HERVW_4q25	HERV	HERVW	oneside	chr4	110278874	110284444	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZBED1P1	ENSG00000250304	7200	RNU6-205P	ENSG00000212160	583	None	None
ERVLE_4q25f	HERV	ERVLE	internal	chr4	110550832	110551533	+	noncoding	ENPEP	protein_coding	SENSE	ENSG00000138792	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q25b	HERV	ERVLB4	prototype	chr4	111170828	111178838	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004062.1	ENSG00000251312	106601	RNU6-289P	ENSG00000200963	152574	None	None
ERVLE_4q25g	HERV	ERVLE	internal	chr4	111506330	111508261	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC083795.1	ENSG00000241722	43593	RNU6-289P	ENSG00000200963	174812	None	None
ERVLE_4q25h	HERV	ERVLE	internal	chr4	112330565	112333779	-	noncoding	ALPK1	protein_coding	ANTISENSE	ENSG00000073331	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q25b	HERV	HERVL	oneside	chr4	112464890	112469114	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NEUROG2	ENSG00000178403	44402	TOX4P1	ENSG00000248697	7105	None	None
HERVL_4q26a	HERV	HERVL	prototype	chr4	113924122	113930536	-	noncoding	ARSJ	protein_coding	SENSE	ENSG00000180801	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q26a	HERV	ERVLB4	internal	chr4	114037150	114037792	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093815.1	ENSG00000248716	66146	ARSJ	ENSG00000180801	57423	None	None
HERVW_4q26	HERV	HERVW	prototype	chr4	114044380	114051816	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARSJ	ENSG00000180801	64653	AC093815.1	ENSG00000248716	52122	None	None
HERVL40_4q26a	HERV	HERVL40	oneside	chr4	114064520	114067417	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARSJ	ENSG00000180801	84793	AC093815.1	ENSG00000248716	36521	None	None
ERVLB4_4q26b	HERV	ERVLB4	oneside	chr4	114145036	114145864	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093815.1	ENSG00000248716	40811	UGT8	ENSG00000174607	452906	None	None
MER61_4q26a	HERV	MER61	oneside	chr4	114145863	114149406	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UGT8	ENSG00000174607	449364	AC093815.1	ENSG00000248716	41638	None	None
ERVLB4_4q26c	HERV	ERVLB4	internal	chr4	114151942	114154704	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093815.1	ENSG00000248716	47717	UGT8	ENSG00000174607	444066	None	None
ERV316A3_4q26a	HERV	ERV316A3	oneside	chr4	114382862	114384154	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093815.1	ENSG00000248716	278637	UGT8	ENSG00000174607	214616	None	None
ERV316A3_4q26b	HERV	ERV316A3	oneside	chr4	114394584	114398388	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UGT8	ENSG00000174607	200382	AC093815.1	ENSG00000248716	290359	None	None
ERV316A3_4q26c	HERV	ERV316A3	internal	chr4	114418161	114420402	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093815.1	ENSG00000248716	313936	UGT8	ENSG00000174607	178368	None	None
MER4_4q26a	HERV	MER4	oneside	chr4	114548209	114553886	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UGT8	ENSG00000174607	44884	AC093815.1	ENSG00000248716	443984	None	None
HERVL_4q26b	HERV	HERVL	prototype	chr4	114747480	114751775	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CIR1P2	ENSG00000250215	32560	RN7SL808P	ENSG00000240637	47556	None	None
ERV316A3_4q26d	HERV	ERV316A3	oneside	chr4	114856647	114859940	+	noncoding	NDST4	protein_coding	ANTISENSE	ENSG00000138653	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_4q26a	HERV	ERVL	internal	chr4	115013416	115016984	+	noncoding	NDST4	protein_coding	ANTISENSE	ENSG00000138653	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_4q26	HERV	MER41	internal	chr4	115418746	115424932	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPS33P3	ENSG00000251308	275443	RPF2P2	ENSG00000250693	203880	None	None
HERVL40_4q26b	HERV	HERVL40	oneside	chr4	115432460	115434009	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPS33P3	ENSG00000251308	289157	RPF2P2	ENSG00000250693	194803	None	None
HERVL_4q26c	HERV	HERVL	oneside	chr4	115458253	115460478	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPF2P2	ENSG00000250693	168334	MRPS33P3	ENSG00000251308	314950	None	None
MER4_4q26b	HERV	MER4	oneside	chr4	115544075	115548514	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPF2P2	ENSG00000250693	80298	MRPS33P3	ENSG00000251308	400772	None	None
ERVLE_4q26a	HERV	ERVLE	internal	chr4	115602186	115602750	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPS33P3	ENSG00000251308	458883	RPF2P2	ENSG00000250693	26062	None	None
ERVLB4_4q26d	HERV	ERVLB4	internal	chr4	115737601	115738418	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGAM4P2	ENSG00000248488	25681	RPF2P2	ENSG00000250693	107894	None	None
ERVLB4_4q26e	HERV	ERVLB4	prototype	chr4	115892491	115899516	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGAM4P2	ENSG00000248488	127672	KRT18P21	ENSG00000250363	21191	None	None
ERV316A3_4q26e	HERV	ERV316A3	prototype	chr4	115916164	115919178	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGAM4P2	ENSG00000248488	151345	KRT18P21	ENSG00000250363	1529	None	None
ERVLB4_4q26f	HERV	ERVLB4	oneside	chr4	115944217	115946541	+	noncoding	AC027613.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000249259	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_4q26	HERV	HARLEQUIN	prototype	chr4	115950380	115956525	+	coding	AC027613.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000249259	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q26a	HERV	HERVH	prototype	chr4	115975700	115981223	-	noncoding	AC027613.1	transcribed_processed_pseudogene	SENSE	ENSG00000249259	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_4q26	HERV	HERV3	prototype	chr4	116014933	116020625	+	noncoding	AC027613.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000249259	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q26b	HERV	ERVLE	internal	chr4	116025781	116027945	-	noncoding	AC027613.1	transcribed_processed_pseudogene	SENSE	ENSG00000249259	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q26f	HERV	ERV316A3	oneside	chr4	116156233	116158418	-	noncoding	AC027613.1	transcribed_processed_pseudogene	SENSE	ENSG00000249259	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q26g	HERV	ERVLB4	oneside	chr4	116214013	116216680	-	noncoding	AC027613.1	transcribed_processed_pseudogene	SENSE	ENSG00000249259	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_4q26c	HERV	HERVL40	internal	chr4	116242723	116243576	-	noncoding	AC027613.1	transcribed_processed_pseudogene	SENSE	ENSG00000249259	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q26h	HERV	ERVLB4	internal	chr4	116259026	116261972	+	noncoding	AC027613.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000249259	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q26d	HERV	HERVL	prototype	chr4	116262653	116266856	+	noncoding	AC027613.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000249259	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_4q26	HERV	HERVL18	prototype	chr4	116357840	116362242	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTRNR2L13	ENSG00000270394	57520	TRMT112P1	ENSG00000250272	16677	None	None
ERVLB4_4q26i	HERV	ERVLB4	oneside	chr4	116389672	116391469	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRMT112P1	ENSG00000250272	10403	CUL4AP1	ENSG00000248139	34514	None	None
HERVFRD_4q26	HERV	HERVFRD	oneside	chr4	116514327	116520774	-	noncoding	AC106892.1	lncRNA	SENSE	ENSG00000250791	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q26c	HERV	ERVLE	internal	chr4	116571629	116576617	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ACTN4P1	ENSG00000213493	21544	AC106892.1	ENSG00000250791	56010	None	None
MER61_4q26b	HERV	MER61	oneside	chr4	116663856	116668575	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ACTN4P1	ENSG00000213493	64245	AC093765.5	ENSG00000287845	46269	None	None
ERV316A3_4q26g	HERV	ERV316A3	internal	chr4	116702896	116704058	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093765.5	ENSG00000287845	10786	ACTN4P1	ENSG00000213493	103285	None	None
HERVL40_4q26d	HERV	HERVL40	oneside	chr4	116738027	116741782	-	noncoding	AC093765.4	lncRNA	SENSE	ENSG00000287520	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:116739956-116739957
ERV316A3_4q26h	HERV	ERV316A3	internal	chr4	116927214	116927742	+	noncoding	AC093765.3	lncRNA	ANTISENSE	ENSG00000287290	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q26e	HERV	HERVL	oneside	chr4	117146073	117147715	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRAM1L1	ENSG00000174599	60497	AC107399.1	ENSG00000223605	102209	None	None
HERVH_4q26b	HERV	HERVH	prototype	chr4	117252107	117257788	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107399.1	ENSG00000223605	1919	LINC02262	ENSG00000224932	56809	None	None
ERVLE_4q26d	HERV	ERVLE	internal	chr4	117568863	117571422	-	noncoding	LINC01378	lncRNA	ANTISENSE	ENSG00000236922	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q26c	HERV	HERVH	oneside	chr4	117600122	117603729	-	noncoding	LINC01378	lncRNA	ANTISENSE	ENSG00000236922	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q26i	HERV	ERV316A3	internal	chr4	117700024	117702020	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01378	ENSG00000236922	8836	LINC02264	ENSG00000229565	132125	None	None
HUERSP2_4q26	HERV	HUERSP2	prototype	chr4	117831374	117836043	-	noncoding	LINC02264	lncRNA	ANTISENSE	ENSG00000229565	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVL_4q26b	HERV	ERVL	internal	chr4	117897885	117898825	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDST3	ENSG00000164100	134793	LINC02264	ENSG00000229565	27925	None	None
ERVLE_4q26e	HERV	ERVLE	internal	chr4	117898903	117900122	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02264	ENSG00000229565	28943	NDST3	ENSG00000164100	133496	None	None
ERV316A3_4q26j	HERV	ERV316A3	internal	chr4	117955978	117956895	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02264	ENSG00000229565	86018	NDST3	ENSG00000164100	76723	None	None
MER34B_4q26	HERV	MER34B	internal	chr4	118181711	118182344	-	noncoding	NDST3	protein_coding	ANTISENSE	ENSG00000164100	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q26k	HERV	ERV316A3	internal	chr4	119475662	119476625	-	noncoding	AC093752.1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000245958	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q26f	HERV	ERVLE	internal	chr4	119817623	119819237	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097173.2	ENSG00000250183	118320	LINC01365	ENSG00000250772	13069	None	chr4:119818861-119818865
HERVH_4q27	HERV	HERVH	prototype	chr4	119993664	119999666	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02502	ENSG00000250392	29371	AC097173.3	ENSG00000253825	35367	None	None
ERVLE_4q27a	HERV	ERVLE	internal	chr4	120287158	120289178	+	noncoding	AC073475.1	lncRNA	SENSE	ENSG00000250938	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q27a	HERV	ERV316A3	oneside	chr4	120641554	120643166	-	noncoding	AC025741.1	lncRNA	ANTISENSE	ENSG00000249409	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q27b	HERV	ERV316A3	internal	chr4	120648495	120649109	-	noncoding	AC025741.1	lncRNA	ANTISENSE	ENSG00000249409	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_4q27	HERV	MER34B	internal	chr4	120929591	120930385	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDNF	ENSG00000173376	105228	PRDM5	ENSG00000138738	6721	None	None
ERVLE_4q27b	HERV	ERVLE	internal	chr4	120994881	120995451	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRDM5	ENSG00000138738	72011	NDNF	ENSG00000173376	40162	None	None
MER61_4q27	HERV	MER61	internal	chr4	121436615	121437197	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	QRFPR	ENSG00000186867	55556	TUBB4BP5	ENSG00000224062	14344	None	None
HERVL_4q27	HERV	HERVL	oneside	chr4	121512501	121514294	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANXA5	ENSG00000164111	153652	TUBB4BP5	ENSG00000224062	60534	None	None
ERVLE_4q27c	HERV	ERVLE	internal	chr4	121551275	121553535	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANXA5	ENSG00000164111	114411	TUBB4BP5	ENSG00000224062	99308	None	None
ERVLE_4q27d	HERV	ERVLE	internal	chr4	121630820	121631675	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANXA5	ENSG00000164111	36271	TUBB4BP5	ENSG00000224062	178853	None	None
ERV316A3_4q27c	HERV	ERV316A3	internal	chr4	122118840	122120793	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL335P	ENSG00000241037	31029	KIAA1109	ENSG00000138688	31540	None	None
HUERSP1_4q27	HERV	HUERSP1	oneside	chr4	122483029	122486436	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IL21	ENSG00000138684	123672	IL2	ENSG00000109471	26304	None	None
ERVLB4_4q27	HERV	ERVLB4	prototype	chr4	122528755	122535914	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IL21	ENSG00000138684	74194	IL2	ENSG00000109471	72030	None	None
HERVL40_4q27	HERV	HERVL40	oneside	chr4	122744167	122746743	-	noncoding	BBS12	protein_coding	ANTISENSE	ENSG00000181004	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr4:122746474-122746609	None
HERVL32_4q28.1a	HERV	HERVL32	oneside	chr4	122948559	122950340	-	noncoding	SPATA5	protein_coding	ANTISENSE	ENSG00000145375	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL32_4q28.1b	HERV	HERVL32	oneside	chr4	122951877	122955311	-	noncoding	SPATA5	protein_coding	ANTISENSE	ENSG00000145375	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q28.1a	HERV	HERVH	prototype	chr4	123011467	123013355	-	noncoding	SPATA5	protein_coding	ANTISENSE	ENSG00000145375	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q28.1a	HERV	ERV316A3	oneside	chr4	123494814	123496826	+	noncoding	AC093821.1	lncRNA	SENSE	ENSG00000249125	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:123495753-123495764,chr4:123495765-123495776
ERVLB4_4q28.1a	HERV	ERVLB4	internal	chr4	123497415	123499444	-	noncoding	AC093821.1	lncRNA	ANTISENSE	ENSG00000249125	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q28.1a	HERV	ERVLE	internal	chr4	123499554	123500559	-	noncoding	AC093821.1	lncRNA	ANTISENSE	ENSG00000249125	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q28.1b	HERV	ERVLE	internal	chr4	123692722	123694448	+	noncoding	LINC01091	lncRNA	SENSE	ENSG00000249464	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q28.1a	HERV	HERVL	prototype	chr4	124471075	124477064	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TECRP2	ENSG00000248565	7285	LINC02516	ENSG00000261083	22876	None	None
MER41_4q28.1	HERV	MER41	prototype	chr4	124558182	124563314	+	noncoding	LINC02516	lncRNA	ANTISENSE	ENSG00000261083	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr4:124562804-124563154	None
ERV316A3_4q28.1b	HERV	ERV316A3	prototype	chr4	124846291	124848649	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAT4	ENSG00000196159	467750	ANKRD50	ENSG00000151458	133559	None	None
HERVH_4q28.1b	HERV	HERVH	prototype	chr4	124875878	124877475	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAT4	ENSG00000196159	438924	ANKRD50	ENSG00000151458	163146	None	None
ERVLE_4q28.1c	HERV	ERVLE	internal	chr4	125132497	125134156	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANKRD50	ENSG00000151458	419765	FAT4	ENSG00000196159	182243	None	None
ERVLB4_4q28.1b	HERV	ERVLB4	internal	chr4	125153973	125154563	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANKRD50	ENSG00000151458	441241	FAT4	ENSG00000196159	161836	None	None
ERV316A3_4q28.1c	HERV	ERV316A3	internal	chr4	125214923	125218975	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANKRD50	ENSG00000151458	502191	FAT4	ENSG00000196159	97424	None	None
HERVH_4q28.1c	HERV	HERVH	prototype	chr4	125561620	125567456	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104664.1	ENSG00000250149	109262	MIR2054	ENSG00000283550	54313	None	None
ERVLE_4q28.1d	HERV	ERVLE	internal	chr4	125623133	125624568	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR2054	ENSG00000283550	115826	AC104664.1	ENSG00000250149	52150	None	None
ERVLB4_4q28.1c	HERV	ERVLB4	internal	chr4	125940626	125943113	+	noncoding	AC104664.1	lncRNA	SENSE	ENSG00000250149	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_4q28.1	HERV	HERVL40	prototype	chr4	126016536	126018955	+	noncoding	AC104664.1	lncRNA	SENSE	ENSG00000250149	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q28.1b	HERV	HERVL	prototype	chr4	126059255	126066569	-	noncoding	LINC02379	lncRNA	ANTISENSE	ENSG00000251649	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_4q28.1a	HERV	HML3	prototype	chr4	126130749	126135134	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	H3P15	ENSG00000251005	23826	AC097528.1	ENSG00000286251	296560	None	None
HERVH_4q28.1d	HERV	HERVH	prototype	chr4	126145184	126150543	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097528.1	ENSG00000286251	281151	H3P15	ENSG00000251005	38261	None	None
HERVL_4q28.1c	HERV	HERVL	prototype	chr4	126186191	126193866	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097528.1	ENSG00000286251	237828	H3P15	ENSG00000251005	79268	None	None
HUERSP2_4q28.1	HERV	HUERSP2	oneside	chr4	126478211	126481800	+	noncoding	AC097528.1	lncRNA	ANTISENSE	ENSG00000286251	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q28.1e	HERV	ERVLE	internal	chr4	126488255	126491707	-	noncoding	AC097528.1	lncRNA	SENSE	ENSG00000286251	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q28.1d	HERV	ERV316A3	oneside	chr4	126640636	126644869	+	noncoding	AC097528.1	lncRNA	ANTISENSE	ENSG00000286251	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q28.1e	HERV	ERV316A3	internal	chr4	127116755	127117327	-	noncoding	AC093772.1	lncRNA	SENSE	ENSG00000248491	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q28.1f	HERV	ERVLE	internal	chr4	127165712	127166619	+	noncoding	AC093772.1	lncRNA	ANTISENSE	ENSG00000248491	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q28.1g	HERV	ERVLE	internal	chr4	127181794	127182808	+	noncoding	AC093772.1	lncRNA	ANTISENSE	ENSG00000248491	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q28.1h	HERV	ERVLE	internal	chr4	127188845	127190350	+	noncoding	AC093772.1	lncRNA	ANTISENSE	ENSG00000248491	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_4q28.1b	HERV	HML3	prototype	chr4	127271438	127277471	-	noncoding	AC093772.1,AC093772.2	lncRNA,lncRNA	SENSE,SENSE	ENSG00000248491,ENSG00000287101	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q28.1e	HERV	HERVH	prototype	chr4	127511038	127517102	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097462.3	ENSG00000287021	15726	AC097462.2	ENSG00000249795	12231	None	None
MER4_4q28.2a	HERV	MER4	oneside	chr4	128246173	128250483	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGRMC2	ENSG00000164040	18754	LARP1B	ENSG00000138709	23242	None	None
MER4_4q28.2b	HERV	MER4	internal	chr4	128250713	128252653	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGRMC2	ENSG00000164040	16584	LARP1B	ENSG00000138709	27782	None	None
MER4_4q28.2c	HERV	MER4	oneside	chr4	128252665	128254205	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGRMC2	ENSG00000164040	15032	LARP1B	ENSG00000138709	29734	None	None
HARLEQUIN_4q28.2	HERV	HARLEQUIN	oneside	chr4	128259895	128266486	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LARP1B	ENSG00000138709	36964	PGRMC2	ENSG00000164040	2751	None	None
HERVL_4q28.2	HERV	HERVL	oneside	chr4	128442399	128444049	+	noncoding	LINC02615	lncRNA	SENSE	ENSG00000251432	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q28.2	HERV	HERVH	prototype	chr4	128640894	128646609	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	JADRR	ENSG00000280711	121619	AC078850.2	ENSG00000248802	39487	None	None
ERVLE_4q28.2a	HERV	ERVLE	internal	chr4	129260324	129262288	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105417.1	ENSG00000251195	81230	AC082650.1	ENSG00000250193	36887	None	None
ERVLE_4q28.2b	HERV	ERVLE	internal	chr4	129495397	129498177	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02466	ENSG00000246876	114153	AC082650.2	ENSG00000287748	117893	None	None
ERVLE_4q28.2c	HERV	ERVLE	internal	chr4	129541552	129545653	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC082650.2	ENSG00000287748	164048	LINC02466	ENSG00000246876	66677	None	None
PRIMA4_4q28.2	HERV	PRIMA4	internal	chr4	130061140	130066571	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02465	ENSG00000249618	85811	LINC02479	ENSG00000251326	309658	None	None
ERVLE_4q28.3a	HERV	ERVLE	internal	chr4	130228348	130231329	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02479	ENSG00000251326	144900	LINC02465	ENSG00000249618	253019	None	None
ERVLE_4q28.3b	HERV	ERVLE	internal	chr4	130336550	130338687	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02479	ENSG00000251326	37542	LINC02465	ENSG00000249618	361221	None	None
ERVLE_4q28.3c	HERV	ERVLE	internal	chr4	130419654	130421527	+	noncoding	LINC02479	lncRNA	SENSE	ENSG00000251326	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q28.3a	HERV	ERV316A3	oneside	chr4	130467291	130468440	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02479	ENSG00000251326	35064	PGBD4P4	ENSG00000248877	26233	None	None
MER4_4q28.3a	HERV	MER4	prototype	chr4	130567214	130575159	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093831.2	ENSG00000280059	233348	GAPDHP56	ENSG00000249018	62870	None	None
ERV316A3_4q28.3b	HERV	ERV316A3	internal	chr4	130645221	130645983	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093831.2	ENSG00000280059	162524	GAPDHP56	ENSG00000249018	140877	None	None
ERV316A3_4q28.3c	HERV	ERV316A3	internal	chr4	130658588	130659358	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093831.2	ENSG00000280059	149149	GAPDHP56	ENSG00000249018	154244	None	None
HERVL40_4q28.3a	HERV	HERVL40	internal	chr4	130704203	130705620	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093831.2	ENSG00000280059	102887	GAPDHP56	ENSG00000249018	199859	None	None
HERVL40_4q28.3b	HERV	HERVL40	internal	chr4	130735560	130738711	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP56	ENSG00000249018	231216	AC093831.2	ENSG00000280059	69796	None	None
ERVLB4_4q28.3a	HERV	ERVLB4	oneside	chr4	130751139	130758463	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP56	ENSG00000249018	246795	AC093831.2	ENSG00000280059	50044	None	None
HERVL40_4q28.3c	HERV	HERVL40	internal	chr4	130758518	130761044	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093831.2	ENSG00000280059	47463	GAPDHP56	ENSG00000249018	254174	None	None
HERVH_4q28.3a	HERV	HERVH	prototype	chr4	130767409	130773268	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP56	ENSG00000249018	263065	AC093831.2	ENSG00000280059	35239	None	None
ERV316A3_4q28.3d	HERV	ERV316A3	internal	chr4	130823240	130824349	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093831.1	ENSG00000250503	56678	AC093831.2	ENSG00000280059	11307	None	None
ERV316A3_4q28.3e	HERV	ERV316A3	oneside	chr4	130824400	130827638	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093831.1	ENSG00000250503	53389	AC093831.2	ENSG00000280059	12467	None	None
ERV316A3_4q28.3f	HERV	ERV316A3	oneside	chr4	130828808	130830679	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093831.2	ENSG00000280059	16875	AC093831.1	ENSG00000250503	50348	None	None
HERV9_4q28.3	HERV	HERV9	oneside	chr4	130843340	130849351	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093831.1	ENSG00000250503	31676	AC093831.2	ENSG00000280059	31407	None	None
PABLB_4q28.3	HERV	PABLB	internal	chr4	130851839	130858198	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093831.2	ENSG00000280059	39906	AC093831.1	ENSG00000250503	22829	None	None
HML3_4q28.3a	HERV	HML3	internal	chr4	130941760	130945512	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093831.1	ENSG00000250503	56119	AC093902.1	ENSG00000287924	18413	None	None
HERVH_4q28.3b	HERV	HERVH	internal	chr4	130947245	130948070	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093831.1	ENSG00000250503	61604	AC093902.1	ENSG00000287924	15855	None	None
MER61_4q28.3a	HERV	MER61	oneside	chr4	130996605	130999757	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093902.1	ENSG00000287924	29030	AC025554.1	ENSG00000250213	112991	None	None
HERVH_4q28.3c	HERV	HERVH	prototype	chr4	131010089	131012321	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093902.1	ENSG00000287924	42514	AC025554.1	ENSG00000250213	100427	None	None
ERV316A3_4q28.3g	HERV	ERV316A3	internal	chr4	131193564	131194601	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025554.1	ENSG00000250213	80309	RNU6-224P	ENSG00000206782	78641	None	None
HUERSP1_4q28.3	HERV	HUERSP1	oneside	chr4	131286850	131291669	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02377	ENSG00000250102	88048	RNU6-224P	ENSG00000206782	13502	None	None
ERVLE_4q28.3d	HERV	ERVLE	internal	chr4	131340201	131342220	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02377	ENSG00000250102	37497	RNU6-224P	ENSG00000206782	66853	None	None
MER4_4q28.3b	HERV	MER4	internal	chr4	131533812	131534290	-	noncoding	LINC02377	lncRNA	ANTISENSE	ENSG00000250102	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_4q28.3d	HERV	HERVL40	oneside	chr4	131568109	131570536	+	noncoding	LINC02377	lncRNA	SENSE	ENSG00000250102	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_4q28.3	HERV	HERVL18	oneside	chr4	131582965	131584915	-	noncoding	LINC02377	lncRNA	ANTISENSE	ENSG00000250102	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q28.3d	HERV	HERVH	prototype	chr4	131665993	131668842	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02377	ENSG00000250102	74168	RN7SL205P	ENSG00000241392	51418	None	None
LTR25_4q28.3	HERV	LTR25	internal	chr4	131804492	131808659	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7AP28	ENSG00000184139	48684	SNHG27	ENSG00000251676	13000	None	None
MER61_4q28.3b	HERV	MER61	oneside	chr4	131808660	131810860	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7AP28	ENSG00000184139	46483	SNHG27	ENSG00000251676	17168	None	None
HERVL_4q28.3a	HERV	HERVL	prototype	chr4	132084194	132094327	-	noncoding	AC093916.1	lncRNA	SENSE	ENSG00000251598	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q28.3b	HERV	HERVL	oneside	chr4	132110529	132114957	-	noncoding	AC093916.1	lncRNA	SENSE	ENSG00000251598	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q28.3e	HERV	HERVH	prototype	chr4	132118178	132123891	+	noncoding	AC093916.1	lncRNA	ANTISENSE	ENSG00000251598	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q28.3e	HERV	ERVLE	internal	chr4	132171031	132172747	+	noncoding	AC093916.1	lncRNA	ANTISENSE	ENSG00000251598	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q28.3f	HERV	ERVLE	oneside	chr4	132213318	132219024	+	noncoding	AC093916.1	lncRNA	ANTISENSE	ENSG00000251598	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q28.3c	HERV	HERVL	prototype	chr4	132351062	132357402	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELL2P2	ENSG00000251051	10384	AC093916.1	ENSG00000251598	5441	None	None
ERVLB4_4q28.3b	HERV	ERVLB4	oneside	chr4	132518257	132522822	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01256	ENSG00000251398	68242	AC114741.1	ENSG00000248369	71022	None	None
HERVFRD_4q28.3	HERV	HERVFRD	prototype	chr4	132540490	132547289	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114741.1	ENSG00000248369	93255	LINC01256	ENSG00000251398	43775	None	None
ERV316A3_4q28.3h	HERV	ERV316A3	prototype	chr4	132607317	132609113	-	noncoding	LINC01256	lncRNA	ANTISENSE	ENSG00000251398	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_4q28.3	HERV	HERVIP10FH	prototype	chr4	132812610	132818873	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC115622.1	ENSG00000251488	17899	LINC01256	ENSG00000251398	134107	None	None
HERVW_4q28.3	HERV	HERVW	prototype	chr4	132882300	132889138	+	coding	AC115622.1	lncRNA	ANTISENSE	ENSG00000251488	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_4q28.3c	HERV	MER4	oneside	chr4	133257232	133260696	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108052.1	ENSG00000286467	326	PCDH10	ENSG00000138650	48626	None	None
MER4_4q28.3d	HERV	MER4	oneside	chr4	133260936	133263404	-	coding	AC108052.1	lncRNA	SENSE	ENSG00000286467	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr4:133261373-133261723,chr4:133262328-133262372	chr4:133262796-133262805,chr4:133262886-133262909,chr4:133263113-133263117
HERVH_4q28.3f	HERV	HERVH	prototype	chr4	133263579	133268907	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105252.1	ENSG00000250191	305659	AC108052.1	ENSG00000286467	464	None	chr4:133268280-133268304
ERV316A3_4q28.3i	HERV	ERV316A3	prototype	chr4	133398222	133402988	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105252.1	ENSG00000250191	171578	AC108052.1	ENSG00000286467	135107	None	None
ERV316A3_4q28.3j	HERV	ERV316A3	prototype	chr4	133454272	133460907	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108052.1	ENSG00000286467	191157	AC105252.1	ENSG00000250191	113659	None	None
HERVH_4q28.3g	HERV	HERVH	prototype	chr4	133531332	133534636	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105252.1	ENSG00000250191	39930	AC108052.1	ENSG00000286467	268217	None	chr4:133534232-133534242,chr4:133534309-133534311
HERVL_4q28.3d	HERV	HERVL	oneside	chr4	133603940	133609118	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079380.1	ENSG00000251388	262128	AC105252.1	ENSG00000250191	28732	None	None
HERVL_4q28.3e	HERV	HERVL	oneside	chr4	133825042	133826770	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105252.1	ENSG00000250191	249834	AC079380.1	ENSG00000251388	44476	None	None
ERVLE_4q28.3g	HERV	ERVLE	oneside	chr4	133920742	133922371	-	noncoding	AC079380.1	lncRNA	SENSE	ENSG00000251388	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_4q28.3	HERV	HERVP71A	oneside	chr4	133947016	133954688	-	noncoding	AC079380.1	lncRNA	SENSE	ENSG00000251388	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q28.3k	HERV	ERV316A3	oneside	chr4	133972382	133978323	+	noncoding	AC079380.1	lncRNA	ANTISENSE	ENSG00000251388	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML5_4q28.3a	HERV	HML5	prototype	chr4	133990481	133997108	-	noncoding	AC079380.1	lncRNA	SENSE	ENSG00000251388	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q28.3h	HERV	HERVH	prototype	chr4	134012212	134018380	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079380.1	ENSG00000251388	1522	AC015631.1	ENSG00000251199	8285	None	None
HERVL40_4q28.3e	HERV	HERVL40	internal	chr4	134207186	134207753	+	noncoding	AC015631.1	lncRNA	ANTISENSE	ENSG00000251199	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_4q28.3f	HERV	HERVL40	oneside	chr4	134550229	134551739	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093722.1	ENSG00000249000	207660	LINC02462	ENSG00000251291	4581	None	None
HERVH_4q28.3i	HERV	HERVH	prototype	chr4	134677937	134683552	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093722.1	ENSG00000249000	75847	LINC02462	ENSG00000251291	132289	None	None
ERVLB4_4q28.3c	HERV	ERVLB4	oneside	chr4	134767916	134776241	-	noncoding	AC093722.1	lncRNA	ANTISENSE	ENSG00000249000	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q28.3f	HERV	HERVL	prototype	chr4	135035959	135042814	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104619.1	ENSG00000241411	83070	AC104619.3	ENSG00000250144	2650	None	None
HERVL74_4q28.3a	HERV	HERVL74	internal	chr4	135085466	135086015	-	noncoding	AC107463.1	lncRNA	ANTISENSE	ENSG00000248434	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q28.3j	HERV	HERVH	prototype	chr4	135167435	135173118	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108867.1	ENSG00000283432	142300	LINC02485	ENSG00000248456	43656	None	None
HERVL_4q28.3g	HERV	HERVL	internal	chr4	135205875	135208999	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02485	ENSG00000248456	82096	AC108867.1	ENSG00000283432	106419	None	None
ERVLB4_4q28.3d	HERV	ERVLB4	internal	chr4	135266682	135269351	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108867.1	ENSG00000283432	46067	LINC02485	ENSG00000248456	142903	None	None
ERV316A3_4q28.3l	HERV	ERV316A3	oneside	chr4	135277118	135278526	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02485	ENSG00000248456	153339	AC108867.1	ENSG00000283432	36892	None	None
HERVL_4q28.3h	HERV	HERVL	oneside	chr4	135403948	135405859	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT18P54	ENSG00000250834	32024	TARS2P1	ENSG00000248104	159258	None	None
HML5_4q28.3b	HERV	HML5	unknown	chr4	135405860	135412500	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT18P54	ENSG00000250834	33936	TARS2P1	ENSG00000248104	152617	None	None
HERVL_4q28.3i	HERV	HERVL	oneside	chr4	135412501	135417188	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT18P54	ENSG00000250834	40577	TARS2P1	ENSG00000248104	147929	None	None
ERVLE_4q28.3h	HERV	ERVLE	internal	chr4	135417707	135419847	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT18P54	ENSG00000250834	45783	TARS2P1	ENSG00000248104	145270	None	None
HUERSP3B_4q28.3	HERV	HUERSP3B	prototype	chr4	135594953	135604761	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TARS2P1	ENSG00000248104	27796	AC105362.1	ENSG00000250865	187623	None	None
ERV316A3_4q28.3m	HERV	ERV316A3	oneside	chr4	135725706	135728654	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105362.1	ENSG00000250865	63730	TARS2P1	ENSG00000248104	158549	None	None
ERVLB4_4q28.3e	HERV	ERVLB4	oneside	chr4	135838958	135844190	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105362.1	ENSG00000250865	33054	LINC00613	ENSG00000248330	22793	None	None
ERVLE_4q28.3i	HERV	ERVLE	internal	chr4	135931741	135932475	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00613	ENSG00000248330	18061	RNU1-89P	ENSG00000207322	63454	None	None
ERVLE_4q28.3j	HERV	ERVLE	oneside	chr4	135951319	135954865	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00613	ENSG00000248330	37639	RNU1-89P	ENSG00000207322	41064	None	None
HML3_4q28.3b	HERV	HML3	prototype	chr4	135954866	135961023	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-89P	ENSG00000207322	34906	LINC00613	ENSG00000248330	41186	None	None
ERVLE_4q28.3k	HERV	ERVLE	internal	chr4	135961028	135961860	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00613	ENSG00000248330	47348	RNU1-89P	ENSG00000207322	34069	None	None
HERVL_4q28.3j	HERV	HERVL	internal	chr4	136138010	136139777	+	noncoding	AC018680.1,AC073429.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000251567,ENSG00000250665	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q28.3f	HERV	ERVLB4	prototype	chr4	136301269	136307253	-	noncoding	AC018680.1	lncRNA	SENSE	ENSG00000251567	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q28.3g	HERV	ERVLB4	oneside	chr4	136308959	136313328	+	noncoding	AC018680.1	lncRNA	ANTISENSE	ENSG00000251567	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_4q28.3	HERV	ERVL	oneside	chr4	136380419	136383512	+	noncoding	AC018680.1	lncRNA	ANTISENSE	ENSG00000251567	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q28.3h	HERV	ERVLB4	oneside	chr4	136483330	136485615	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093875.1	ENSG00000279749	67621	AC018680.1	ENSG00000251567	87859	None	None
HERVH_4q28.3k	HERV	HERVH	prototype	chr4	136610281	136618761	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093875.1	ENSG00000279749	56542	LINC02511	ENSG00000248869	177158	None	None
HUERSP2_4q28.3	HERV	HUERSP2	prototype	chr4	136636034	136640678	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093875.1	ENSG00000279749	82295	LINC02511	ENSG00000248869	155241	None	None
ERVLE_4q28.3l	HERV	ERVLE	internal	chr4	136652286	136654345	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093875.1	ENSG00000279749	98547	LINC02511	ENSG00000248869	141574	None	None
ERV316A3_4q28.3n	HERV	ERV316A3	internal	chr4	136672204	136673670	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093875.1	ENSG00000279749	118465	LINC02511	ENSG00000248869	122249	None	None
MER61_4q28.3c	HERV	MER61	prototype	chr4	136716088	136721553	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093875.1	ENSG00000279749	162349	LINC02511	ENSG00000248869	74366	None	None
ERV316A3_4q28.3o	HERV	ERV316A3	oneside	chr4	136926806	136932582	+	noncoding	LINC02511	lncRNA	ANTISENSE	ENSG00000248869	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q28.3p	HERV	ERV316A3	internal	chr4	136991055	136992817	-	noncoding	LINC02511	lncRNA	SENSE	ENSG00000248869	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q28.3q	HERV	ERV316A3	oneside	chr4	137378340	137381280	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERF1AP1	ENSG00000250813	77153	STMN1P2	ENSG00000251440	44146	None	None
ERV316A3_4q28.3r	HERV	ERV316A3	internal	chr4	137413345	137419231	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STMN1P2	ENSG00000251440	6195	SERF1AP1	ENSG00000250813	112158	None	None
ERV316A3_4q28.3s	HERV	ERV316A3	oneside	chr4	137436313	137438946	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STMN1P2	ENSG00000251440	10449	RPS23P2	ENSG00000213448	9141	None	None
MER41_4q28.3	HERV	MER41	prototype	chr4	137464596	137469531	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS23P2	ENSG00000213448	16095	PCDH18	ENSG00000189184	49387	None	None
HERVEA_4q28.3	HERV	HERVEA	prototype	chr4	137478311	137487044	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS23P2	ENSG00000213448	29810	PCDH18	ENSG00000189184	31874	None	chr4:137478659-137478665
ERV316A3_4q28.3t	HERV	ERV316A3	prototype	chr4	137964699	137969722	+	noncoding	AC097511.1	lncRNA	SENSE	ENSG00000287144	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q28.3i	HERV	ERVLB4	prototype	chr4	138037565	138044529	-	noncoding	AC097511.1,LINC00616	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000287144,ENSG00000248307	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL74_4q28.3b	HERV	HERVL74	internal	chr4	138124267	138130352	-	noncoding	LINC00616,SLC7A11-AS1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000248307,ENSG00000250033	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVW_4q31.1	HERV	HERVW	prototype	chr4	138621787	138627199	-	noncoding	LINC00499	lncRNA	ANTISENSE	ENSG00000251372	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q31.1a	HERV	HERVH	prototype	chr4	138927836	138933543	+	noncoding	AC109927.1	lncRNA	ANTISENSE	ENSG00000250195	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q31.1b	HERV	HERVH	oneside	chr4	139157976	139160055	-	noncoding	ELF2	protein_coding	SENSE	ENSG00000109381	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_4q31.1	HERV	MER61	internal	chr4	139236037	139236507	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1074P	ENSG00000206722	20150	RNU6-506P	ENSG00000252362	4918	None	None
HERVL_4q31.1	HERV	HERVL	prototype	chr4	139442392	139449816	+	noncoding	AC097376.3	lncRNA	ANTISENSE	ENSG00000273247	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVK11_4q31.1	HERV	HERVK11	prototype	chr4	139632366	139639045	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC112236.1	ENSG00000261268	9134	MGST2	ENSG00000085871	26723	None	None
ERVLE_4q31.1a	HERV	ERVLE	oneside	chr4	139639594	139642728	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MGST2	ENSG00000085871	23040	AC112236.1	ENSG00000261268	16362	None	None
MER41_4q31.1	HERV	MER41	prototype	chr4	139711256	139715980	-	noncoding	MGST2	protein_coding	ANTISENSE	ENSG00000085871	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q31.1a	HERV	ERV316A3	oneside	chr4	140210609	140212643	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SCOC	ENSG00000153130	44643	MAML3	ENSG00000196782	56425	None	None
HERVH_4q31.1c	HERV	HERVH	oneside	chr4	140214275	140219193	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAML3	ENSG00000196782	60091	SCOC	ENSG00000153130	38093	None	None
ERV316A3_4q31.1b	HERV	ERV316A3	oneside	chr4	140289102	140293802	-	noncoding	SCOC,SCOC-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000153130,ENSG00000196951	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q31.1b	HERV	ERVLE	internal	chr4	140435357	140437823	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CLGN	ENSG00000153132	7696	MGAT4D	ENSG00000205301	4439	None	None
HERVI_4q31.21	HERV	HERVI	oneside	chr4	140600095	140602334	-	noncoding	AC108019.1	processed_pseudogene	SENSE	ENSG00000248621	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q31.21a	HERV	ERV316A3	internal	chr4	141234973	141239196	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF330	ENSG00000109445	276	AC107220.1	ENSG00000248747	1543	chr4:141239036-141239284	None
ERVLE_4q31.21a	HERV	ERVLE	oneside	chr4	141422582	141426844	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097504.2	ENSG00000272632	3987	AC097504.1	ENSG00000250189	14996	None	None
ERV316A3_4q31.21b	HERV	ERV316A3	oneside	chr4	141464461	141466105	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02276	ENSG00000250141	103826	AC097504.2	ENSG00000272632	33177	None	None
ERVLB4_4q31.21a	HERV	ERVLB4	oneside	chr4	141493932	141498355	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097504.2	ENSG00000272632	62648	LINC02276	ENSG00000250141	71576	None	None
MER4B_4q31.21	HERV	MER4B	oneside	chr4	141620342	141622060	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IL15	ENSG00000164136	14523	LINC02276	ENSG00000250141	44265	None	None
MER4_4q31.21a	HERV	MER4	internal	chr4	141623623	141624896	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IL15	ENSG00000164136	11687	LINC02276	ENSG00000250141	47546	None	None
HML3_4q31.21	HERV	HML3	prototype	chr4	141937870	141941589	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	INPP4B	ENSG00000109452	81571	IL15	ENSG00000164136	203883	None	None
PABLA_4q31.21a	HERV	PABLA	internal	chr4	141978620	141981690	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IL15	ENSG00000164136	244633	INPP4B	ENSG00000109452	41470	None	None
PABLA_4q31.21b	HERV	PABLA	internal	chr4	141997926	141998795	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	INPP4B	ENSG00000109452	24365	IL15	ENSG00000164136	263939	None	None
ERVLE_4q31.21b	HERV	ERVLE	internal	chr4	142212289	142214425	-	noncoding	INPP4B	protein_coding	SENSE	ENSG00000109452	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_4q31.21a	HERV	MER61	prototype	chr4	142656025	142661274	+	noncoding	INPP4B,AC139720.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000109452,ENSG00000249806	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q31.21c	HERV	ERVLE	internal	chr4	142859332	142861588	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104596.1	ENSG00000250326	71607	INPP4B	ENSG00000109452	11900	None	None
MER4_4q31.21b	HERV	MER4	internal	chr4	143091080	143092446	+	noncoding	AC104596.1	lncRNA	ANTISENSE	ENSG00000250326	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_4q31.21c	HERV	MER4	oneside	chr4	143092736	143097218	+	noncoding	AC104596.1	lncRNA	ANTISENSE	ENSG00000250326	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q31.21c	HERV	ERV316A3	prototype	chr4	143122163	143124563	+	noncoding	AC104596.1	lncRNA	ANTISENSE	ENSG00000250326	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_4q31.21	HERV	HERVP71A	internal	chr4	143177566	143180491	-	coding	AC104596.1	lncRNA	SENSE	ENSG00000250326	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER61_4q31.21b	HERV	MER61	prototype	chr4	143426951	143432579	-	noncoding	GAB1	protein_coding	ANTISENSE	ENSG00000109458	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q31.21d	HERV	ERV316A3	internal	chr4	143720039	143721952	+	noncoding	AC107223.1	lncRNA	SENSE	ENSG00000251600	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q31.21b	HERV	ERVLB4	internal	chr4	144319656	144321673	-	noncoding	AC107223.1,AC098588.3,AC098588.2	lncRNA,lncRNA,protein_coding	ANTISENSE,SENSE,SENSE	ENSG00000251600,ENSG00000285783,ENSG00000285713	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q31.21d	HERV	ERVLE	internal	chr4	144861022	144862441	+	noncoding	AC098588.3,AC098588.2,ANAPC10,AC109811.1	lncRNA,protein_coding,protein_coding,lncRNA	ANTISENSE,ANTISENSE,ANTISENSE,SENSE	ENSG00000285783,ENSG00000285713,ENSG00000164162,ENSG00000250406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q31.21e	HERV	ERVLE	internal	chr4	144890167	144891006	+	noncoding	AC098588.2,ANAPC10	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000285713,ENSG00000164162	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q31.21a	HERV	HERVL	oneside	chr4	144915445	144916512	-	noncoding	AC098588.2,ANAPC10	protein_coding,protein_coding	SENSE,SENSE	ENSG00000285713,ENSG00000164162	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_4q31.21c	HERV	MER61	oneside	chr4	144953732	144956610	+	noncoding	AC098588.2,ANAPC10	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000285713,ENSG00000164162	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_4q31.21d	HERV	MER61	oneside	chr4	144961310	144962934	+	noncoding	AC098588.2,ANAPC10	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000285713,ENSG00000164162	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q31.21b	HERV	HERVL	prototype	chr4	145028090	145034711	+	noncoding	AC098588.2,ANAPC10	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000285713,ENSG00000164162	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:145034337-145034361
ERVLE_4q31.21f	HERV	ERVLE	internal	chr4	145206813	145210318	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS23P4	ENSG00000240992	59492	OTUD4	ENSG00000164164	26224	None	None
HERVH_4q31.21a	HERV	HERVH	prototype	chr4	145252689	145256982	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS23P4	ENSG00000240992	12828	OTUD4	ENSG00000164164	72100	None	None
ERV316A3_4q31.21e	HERV	ERV316A3	oneside	chr4	145300335	145302957	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02266	ENSG00000272727	32306	RPS23P4	ENSG00000240992	29777	None	None
ERV316A3_4q31.21f	HERV	ERV316A3	oneside	chr4	145438648	145439497	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079228.1	ENSG00000278943	60691	AC093796.1	ENSG00000286420	5402	None	None
HERVH_4q31.21b	HERV	HERVH	prototype	chr4	145698823	145703503	+	noncoding	C4orf51	protein_coding	SENSE	ENSG00000237136	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:145699750-145699753
HERVFRD_4q31.21	HERV	HERVFRD	prototype	chr4	145704708	145710863	-	noncoding	C4orf51	protein_coding	ANTISENSE	ENSG00000237136	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q31.21c	HERV	HERVH	prototype	chr4	145832612	145838502	+	noncoding	ZNF827,AC104791.2,AC104791.1	protein_coding,TEC,lncRNA	ANTISENSE,ANTISENSE,SENSE	ENSG00000151612,ENSG00000279481,ENSG00000251687	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q31.22a	HERV	ERV316A3	prototype	chr4	146063634	146067777	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108206.2	ENSG00000260303	6872	LINC01095	ENSG00000248809	9940	None	None
ERVLE_4q31.22a	HERV	ERVLE	internal	chr4	146120403	146121348	+	noncoding	LINC01095	lncRNA	ANTISENSE	ENSG00000248809	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q31.22	HERV	ERVLB4	internal	chr4	146145009	146148190	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01095	ENSG00000248809	23096	LSM6	ENSG00000164167	27513	None	None
HERVE_4q31.22	HERV	HERVE	oneside	chr4	146526145	146530559	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC10A7	ENSG00000120519	4181	RNU1-44P	ENSG00000207182	49489	None	None
HERVL_4q31.22	HERV	HERVL	prototype	chr4	146536314	146538445	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-44P	ENSG00000207182	41603	SLC10A7	ENSG00000120519	14350	None	None
MER4B_4q31.22	HERV	MER4B	internal	chr4	146734844	146736712	+	noncoding	TTC29	protein_coding	ANTISENSE	ENSG00000137473	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q31.22b	HERV	ERVLE	internal	chr4	146950551	146952319	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTC29	ENSG00000137473	4669	AC092435.1	ENSG00000248346	5119	None	None
ERVL_4q31.22	HERV	ERVL	internal	chr4	146957280	146958202	+	noncoding	AC092435.1	lncRNA	SENSE	ENSG00000248346	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q31.22b	HERV	ERV316A3	oneside	chr4	146984610	146986702	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092435.3	ENSG00000260090	18790	AC092435.1	ENSG00000248346	9153	None	None
ERVLE_4q31.23a	HERV	ERVLE	internal	chr4	147566855	147569445	-	noncoding	LINC02507	lncRNA	ANTISENSE	ENSG00000251688	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q31.23b	HERV	ERVLE	internal	chr4	147607257	147609206	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093835.1	ENSG00000251298	346	LINC02507	ENSG00000251688	12668	None	None
MER61_4q31.23	HERV	MER61	prototype	chr4	148298890	148305043	+	noncoding	NR3C2	protein_coding	ANTISENSE	ENSG00000151623	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q31.23c	HERV	ERVLE	internal	chr4	148613113	148614226	-	noncoding	AC002460.2	lncRNA	ANTISENSE	ENSG00000287292	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q31.23a	HERV	ERV316A3	internal	chr4	148720776	148721538	-	noncoding	AC002460.2	lncRNA	ANTISENSE	ENSG00000287292	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q31.23b	HERV	ERV316A3	oneside	chr4	148769793	148771067	+	noncoding	AC002460.2	lncRNA	SENSE	ENSG00000287292	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q31.23	HERV	ERVLB4	prototype	chr4	149020375	149026145	+	noncoding	AC002460.2	lncRNA	SENSE	ENSG00000287292	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q31.23c	HERV	ERV316A3	oneside	chr4	149027518	149031932	-	noncoding	AC108156.1	lncRNA	SENSE	ENSG00000249752	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q31.23a	HERV	HERVL	prototype	chr4	149038742	149046697	+	noncoding	AC108156.1	lncRNA	ANTISENSE	ENSG00000249752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q31.23d	HERV	ERV316A3	prototype	chr4	149306310	149313049	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02355	ENSG00000248210	28187	IQCM	ENSG00000234828	38854	None	None
HERVL_4q31.23b	HERV	HERVL	prototype	chr4	149514675	149518006	+	noncoding	IQCM	protein_coding	ANTISENSE	ENSG00000234828	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q31.3a	HERV	ERVLB4	oneside	chr4	150769363	150772922	-	noncoding	LRBA	protein_coding	SENSE	ENSG00000198589	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q31.3b	HERV	ERVLB4	internal	chr4	150772965	150775324	-	noncoding	LRBA	protein_coding	SENSE	ENSG00000198589	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_4q31.3a	HERV	HERVL40	oneside	chr4	151111795	151114965	+	noncoding	SH3D19	protein_coding	ANTISENSE	ENSG00000109686	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q31.3a	HERV	ERV316A3	oneside	chr4	151331579	151332762	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104819.3	ENSG00000270265	1013	SH3D19	ENSG00000109686	5947	None	None
HERVH_4q31.3a	HERV	HERVH	oneside	chr4	151812887	151818233	-	noncoding	AC107074.1	lncRNA	ANTISENSE	ENSG00000249184	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL32_4q31.3a	HERV	HERVL32	oneside	chr4	151895741	151898318	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097375.2	ENSG00000249818	6614	AC112242.1	ENSG00000249708	4478	None	None
HERVL32_4q31.3b	HERV	HERVL32	oneside	chr4	151898732	151900889	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097375.2	ENSG00000249818	4043	AC112242.1	ENSG00000249708	7469	None	None
ERVLE_4q31.3a	HERV	ERVLE	internal	chr4	152499782	152500486	-	noncoding	FBXW7,AC023424.3	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000109670,ENSG00000287555	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q31.3b	HERV	HERVH	prototype	chr4	152741355	152747147	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TIGD4	ENSG00000169989	22207	TMEM154	ENSG00000170006	61343	None	None
MER4_4q31.3a	HERV	MER4	internal	chr4	152920437	152921545	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM192BP	ENSG00000231841	5901	ARFIP1	ENSG00000164144	1974	None	None
MER4_4q31.3b	HERV	MER4	oneside	chr4	152925043	152927413	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM192BP	ENSG00000231841	33	ARFIP1	ENSG00000164144	6580	chr4:152926577-152926669	chr4:152927409-152927415
HERVL40_4q31.3b	HERV	HERVL40	prototype	chr4	153629956	153631694	-	noncoding	TMEM131L	protein_coding	ANTISENSE	ENSG00000121210	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_4q31.3	HERV	HML3	prototype	chr4	153688368	153694427	-	noncoding	TLR2	protein_coding	ANTISENSE	ENSG00000137462	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER34B_4q31.3	HERV	MER34B	internal	chr4	153696581	153699612	+	noncoding	TLR2	protein_coding	SENSE	ENSG00000137462	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q31.3b	HERV	ERVLE	oneside	chr4	153879148	153884127	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SFRP2	ENSG00000145423	90065	AC079298.3	ENSG00000280241	64591	None	None
HERVH_4q31.3c	HERV	HERVH	prototype	chr4	154056546	154063805	+	noncoding	AC079298.3	lncRNA	SENSE	ENSG00000280241	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q31.3c	HERV	ERVLE	internal	chr4	154309666	154310865	+	noncoding	DCHS2	protein_coding	ANTISENSE	ENSG00000197410	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q31.3c	HERV	ERVLB4	internal	chr4	154450474	154452066	+	noncoding	DCHS2	protein_coding	ANTISENSE	ENSG00000197410	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q31.3b	HERV	ERV316A3	oneside	chr4	154473233	154474652	+	noncoding	DCHS2	protein_coding	ANTISENSE	ENSG00000197410	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_4q32.1a	HERV	HML5	prototype	chr4	154836002	154840144	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097467.3	ENSG00000250910	333572	RBM46	ENSG00000151962	7189	None	None
HERVH_4q32.1a	HERV	HERVH	prototype	chr4	154918329	154924563	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097467.3	ENSG00000250910	249153	RBM46	ENSG00000151962	89516	None	None
MER41_4q32.1a	HERV	MER41	internal	chr4	154949756	154954350	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097467.3	ENSG00000250910	219366	RBM46	ENSG00000151962	120943	None	None
ERV316A3_4q32.1a	HERV	ERV316A3	oneside	chr4	155046945	155048453	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBM46	ENSG00000151962	218132	AC097467.3	ENSG00000250910	125263	None	None
HERVH_4q32.1b	HERV	HERVH	prototype	chr4	155108278	155114237	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097467.3	ENSG00000250910	59479	RBM46	ENSG00000151962	279465	None	None
MER4_4q32.1a	HERV	MER4	oneside	chr4	155114727	155119462	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097467.3	ENSG00000250910	54254	RBM46	ENSG00000151962	285914	None	None
LTR57_4q32.1	HERV	LTR57	internal	chr4	155119463	155120045	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097467.3	ENSG00000250910	53671	RBM46	ENSG00000151962	290650	None	None
MER4_4q32.1b	HERV	MER4	oneside	chr4	155120046	155123356	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097467.3	ENSG00000250910	50360	RBM46	ENSG00000151962	291233	None	None
MER101_4q32.1a	HERV	MER101	oneside	chr4	155152384	155155266	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBM46	ENSG00000151962	323571	AC097467.3	ENSG00000250910	18450	None	None
MER101_4q32.1b	HERV	MER101	internal	chr4	155155343	155159605	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBM46	ENSG00000151962	326530	AC097467.3	ENSG00000250910	14111	None	None
MER101_4q32.1c	HERV	MER101	oneside	chr4	155159743	155161543	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBM46	ENSG00000151962	330930	AC097467.3	ENSG00000250910	12173	None	None
ERVLE_4q32.1a	HERV	ERVLE	internal	chr4	155181369	155183847	+	noncoding	AC097467.3	lncRNA	SENSE	ENSG00000250910	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q32.1a	HERV	ERVLB4	internal	chr4	155273422	155276460	+	noncoding	AC097467.3	lncRNA	SENSE	ENSG00000250910	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q32.1b	HERV	ERVLE	internal	chr4	155410928	155411819	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097526.1	ENSG00000287730	30831	AC097467.4	ENSG00000271606	25436	None	None
ERVLE_4q32.1c	HERV	ERVLE	internal	chr4	155414669	155419242	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097526.1	ENSG00000287730	23408	AC097467.4	ENSG00000271606	29177	None	None
HERVL40_4q32.1a	HERV	HERVL40	oneside	chr4	155737558	155741019	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104083.1	ENSG00000260244	496	GUCY1B1	ENSG00000061918	17973	None	None
ERVLB4_4q32.1b	HERV	ERVLB4	oneside	chr4	155741208	155745176	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GUCY1B1	ENSG00000061918	13816	AC104083.1	ENSG00000260244	4146	None	None
PRIMA4_4q32.1	HERV	PRIMA4	internal	chr4	155844110	155845073	+	noncoding	ASIC5	protein_coding	ANTISENSE	ENSG00000256394	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_4q32.1c	HERV	MER4	oneside	chr4	155845149	155850544	+	noncoding	ASIC5	protein_coding	ANTISENSE	ENSG00000256394	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_4q32.1a	HERV	MER61	prototype	chr4	155871948	155878290	-	noncoding	TDO2	protein_coding	ANTISENSE	ENSG00000151790	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q32.1a	HERV	HERVL	oneside	chr4	155921533	155922738	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTSO	ENSG00000256043	1380	TDO2	ENSG00000151790	1127	None	None
HERVH_4q32.1c	HERV	HERVH	oneside	chr4	156103922	156109304	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096736.3	ENSG00000251511	476675	FTH1P21	ENSG00000249013	96934	None	None
MER61_4q32.1b	HERV	MER61	internal	chr4	156150542	156151142	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096736.3	ENSG00000251511	434837	FTH1P21	ENSG00000249013	143554	None	None
ERV316A3_4q32.1b	HERV	ERV316A3	oneside	chr4	156238104	156241420	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096736.3	ENSG00000251511	344559	FTH1P21	ENSG00000249013	231116	None	None
ERVLE_4q32.1d	HERV	ERVLE	internal	chr4	156407191	156408016	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FTH1P21	ENSG00000249013	400203	AC096736.3	ENSG00000251511	177963	None	None
HERVL_4q32.1b	HERV	HERVL	prototype	chr4	156488654	156492314	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FTH1P21	ENSG00000249013	481666	AC096736.3	ENSG00000251511	93665	None	None
HERVH_4q32.1d	HERV	HERVH	prototype	chr4	156600196	156606034	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096736.3	ENSG00000251511	10157	LINC02272	ENSG00000251283	28460	None	None
ERV316A3_4q32.1c	HERV	ERV316A3	internal	chr4	156707315	156712304	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PDGFC	ENSG00000145431	48150	AC096736.1	ENSG00000248912	14679	None	None
ERV316A3_4q32.1d	HERV	ERV316A3	oneside	chr4	156990675	156992065	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPPH1-3P	ENSG00000252350	3982	AC079403.1	ENSG00000252524	72492	None	None
ERV316A3_4q32.1e	HERV	ERV316A3	oneside	chr4	157008663	157010178	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPPH1-3P	ENSG00000252350	21970	AC079403.1	ENSG00000252524	54379	None	None
ERV316A3_4q32.1f	HERV	ERV316A3	oneside	chr4	157047995	157050959	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPPH1-3P	ENSG00000252350	61302	AC079403.1	ENSG00000252524	13598	None	None
ERVLE_4q32.1e	HERV	ERVLE	internal	chr4	157208320	157211329	+	noncoding	GRIA2	protein_coding	SENSE	ENSG00000120251	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q32.1c	HERV	HERVL	oneside	chr4	157404175	157408193	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093817.2	ENSG00000286133	160538	GRIA2	ENSG00000120251	38100	None	None
MER41_4q32.1b	HERV	MER41	internal	chr4	157469320	157475164	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRIA2	ENSG00000120251	103245	AC093817.2	ENSG00000286133	93567	None	None
MER61_4q32.1c	HERV	MER61	internal	chr4	157469932	157470669	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRIA2	ENSG00000120251	103857	AC093817.2	ENSG00000286133	98062	None	None
MER61_4q32.1d	HERV	MER61	internal	chr4	157523588	157525146	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093817.2	ENSG00000286133	43585	GRIA2	ENSG00000120251	157513	None	None
LTR25_4q32.1	HERV	LTR25	internal	chr4	157525426	157527869	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093817.2	ENSG00000286133	40862	GRIA2	ENSG00000120251	159351	None	None
MER61_4q32.1e	HERV	MER61	internal	chr4	157527874	157528532	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093817.2	ENSG00000286133	40199	GRIA2	ENSG00000120251	161799	None	None
HERVL74_4q32.1	HERV	HERVL74	prototype	chr4	157557134	157560521	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRIA2	ENSG00000120251	191059	AC093817.2	ENSG00000286133	8210	None	None
HERVL_4q32.1d	HERV	HERVL	oneside	chr4	157730287	157734156	-	noncoding	AC093817.2	lncRNA	SENSE	ENSG00000286133	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q32.1f	HERV	ERVLE	oneside	chr4	157746734	157748847	-	noncoding	AC093817.2	lncRNA	SENSE	ENSG00000286133	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q32.1g	HERV	ERVLE	internal	chr4	157752235	157752878	+	noncoding	AC093817.2	lncRNA	ANTISENSE	ENSG00000286133	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q32.1g	HERV	ERV316A3	oneside	chr4	157944968	157945603	+	noncoding	AC017037.5,AC084740.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000286862,ENSG00000287226	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_4q32.1	HERV	HARLEQUIN	oneside	chr4	158224447	158229241	-	noncoding	TMEM144	protein_coding	ANTISENSE	ENSG00000164124	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:158228652-158228672
HML5_4q32.1b	HERV	HML5	prototype	chr4	158292783	158299055	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC098679.2	ENSG00000251429	14107	RXFP1	ENSG00000171509	16256	None	None
ERVLB4_4q32.1c	HERV	ERVLB4	oneside	chr4	159406407	159408120	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074344.2	ENSG00000250180	5161	LINC02233	ENSG00000250488	257713	None	None
ERV316A3_4q32.1h	HERV	ERV316A3	oneside	chr4	159509270	159511357	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074344.2	ENSG00000250180	108024	LINC02233	ENSG00000250488	154476	None	None
ERVLE_4q32.1h	HERV	ERVLE	internal	chr4	159546737	159548796	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02233	ENSG00000250488	117037	AC074344.2	ENSG00000250180	145491	None	None
ERVL_4q32.1	HERV	ERVL	oneside	chr4	159558396	159561961	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02233	ENSG00000250488	103872	AC074344.2	ENSG00000250180	157150	None	None
MER34B_4q32.1a	HERV	MER34B	oneside	chr4	159590210	159591360	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02233	ENSG00000250488	74473	AC074344.2	ENSG00000250180	188964	None	None
MER34B_4q32.1b	HERV	MER34B	internal	chr4	159591506	159592204	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02233	ENSG00000250488	73629	AC074344.2	ENSG00000250180	190260	None	None
HUERSP2_4q32.1	HERV	HUERSP2	internal	chr4	159672911	159673774	+	noncoding	LINC02233	lncRNA	ANTISENSE	ENSG00000250488	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_4q32.1b	HERV	HERVL40	oneside	chr4	159984343	159987027	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02233	ENSG00000250488	206515	AC093853.1	ENSG00000250997	534802	None	None
HERVL_4q32.1e	HERV	HERVL	prototype	chr4	160112602	160119438	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02233	ENSG00000250488	334774	AC093853.1	ENSG00000250997	402391	None	None
HERVL_4q32.1f	HERV	HERVL	oneside	chr4	160270612	160276262	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02233	ENSG00000250488	492784	AC093853.1	ENSG00000250997	245567	None	None
ERV316A3_4q32.1i	HERV	ERV316A3	oneside	chr4	160295729	160297504	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093853.1	ENSG00000250997	224325	LINC02233	ENSG00000250488	517901	None	None
ERVLB4_4q32.1d	HERV	ERVLB4	prototype	chr4	160315126	160320164	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093853.1	ENSG00000250997	201665	LINC02233	ENSG00000250488	537298	None	None
ERVLE_4q32.1i	HERV	ERVLE	internal	chr4	160373464	160374108	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02233	ENSG00000250488	595636	AC093853.1	ENSG00000250997	147721	None	None
HERVL40_4q32.1c	HERV	HERVL40	oneside	chr4	160405896	160407306	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093853.1	ENSG00000250997	114523	LINC02233	ENSG00000250488	628068	None	None
ERVLE_4q32.1j	HERV	ERVLE	oneside	chr4	160442390	160448612	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02233	ENSG00000250488	664562	AC093853.1	ENSG00000250997	73217	None	None
MER41_4q32.1c	HERV	MER41	unknown	chr4	160487182	160493868	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02233	ENSG00000250488	709354	AC093853.1	ENSG00000250997	27961	None	None
ERV316A3_4q32.1j	HERV	ERV316A3	oneside	chr4	160498362	160501675	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02233	ENSG00000250488	720534	AC093853.1	ENSG00000250997	20154	None	None
ERVLE_4q32.1k	HERV	ERVLE	internal	chr4	160513148	160514766	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093853.1	ENSG00000250997	7063	LINC02233	ENSG00000250488	735320	None	None
HML2_4q32.1	HERV	HML2	oneside	chr4	160658786	160660924	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02477	ENSG00000249425	71969	RPS14P7	ENSG00000242635	157498	None	None
ERVLE_4q32.1l	HERV	ERVLE	internal	chr4	160671598	160672932	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS14P7	ENSG00000242635	145490	LINC02477	ENSG00000249425	84781	None	None
ERV316A3_4q32.1k	HERV	ERV316A3	oneside	chr4	160754500	160757673	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS14P7	ENSG00000242635	60749	LINC02477	ENSG00000249425	167683	None	None
ERV316A3_4q32.1l	HERV	ERV316A3	internal	chr4	160794307	160799795	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02477	ENSG00000249425	207490	RPS14P7	ENSG00000242635	18627	None	None
ERVLE_4q32.2a	HERV	ERVLE	internal	chr4	160844188	160845622	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104793.1	ENSG00000249568	533331	RPS14P7	ENSG00000242635	25319	None	None
ERVLE_4q32.2b	HERV	ERVLE	internal	chr4	160964696	160965536	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS14P7	ENSG00000242635	145827	AC104793.1	ENSG00000249568	413417	None	None
ERVLE_4q32.2c	HERV	ERVLE	internal	chr4	160976582	160978137	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS14P7	ENSG00000242635	157713	AC104793.1	ENSG00000249568	400816	None	None
ERVLE_4q32.2d	HERV	ERVLE	internal	chr4	160987535	160989466	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS14P7	ENSG00000242635	168666	AC104793.1	ENSG00000249568	389487	None	None
ERVLE_4q32.2e	HERV	ERVLE	internal	chr4	161124264	161126524	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104793.1	ENSG00000249568	252429	RPS14P7	ENSG00000242635	305395	None	None
HUERSP3_4q32.2a	HERV	HUERSP3	prototype	chr4	161251767	161257841	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104793.1	ENSG00000249568	121112	RPS14P7	ENSG00000242635	432898	None	None
ERVLE_4q32.2f	HERV	ERVLE	internal	chr4	161329444	161330082	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS14P7	ENSG00000242635	510575	AC104793.1	ENSG00000249568	48871	None	None
ERVLB4_4q32.2	HERV	ERVLB4	oneside	chr4	161419738	161422043	+	noncoding	FSTL5	protein_coding	ANTISENSE	ENSG00000168843	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q32.2g	HERV	ERVLE	internal	chr4	162077669	162078759	+	noncoding	FSTL5	protein_coding	ANTISENSE	ENSG00000168843	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q32.2a	HERV	ERV316A3	oneside	chr4	162229726	162231261	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FSTL5	ENSG00000168843	65722	MTHFD2P4	ENSG00000251253	90927	None	None
ERV316A3_4q32.2b	HERV	ERV316A3	internal	chr4	162233833	162234765	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FSTL5	ENSG00000168843	69829	MTHFD2P4	ENSG00000251253	87423	None	None
ERVLE_4q32.2h	HERV	ERVLE	internal	chr4	162269737	162272381	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTHFD2P4	ENSG00000251253	49807	FSTL5	ENSG00000168843	105733	None	None
ERVLE_4q32.2i	HERV	ERVLE	internal	chr4	162353129	162354919	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTHFD2P4	ENSG00000251253	29222	TOMM22P4	ENSG00000248396	166763	None	None
ERVLE_4q32.2j	HERV	ERVLE	internal	chr4	162366070	162367326	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TOMM22P4	ENSG00000248396	154356	MTHFD2P4	ENSG00000251253	42163	None	None
LTR46_4q32.2	HERV	LTR46	oneside	chr4	162536081	162538856	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021134.1	ENSG00000248431	166503	TOMM22P4	ENSG00000248396	14040	None	None
PABLA_4q32.2	HERV	PABLA	prototype	chr4	162557088	162563129	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021134.1	ENSG00000248431	142230	TOMM22P4	ENSG00000248396	35047	None	None
MER4B_4q32.2	HERV	MER4B	oneside	chr4	162605101	162606615	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TOMM22P4	ENSG00000248396	83060	AC021134.1	ENSG00000248431	98744	None	None
HERVH_4q32.2a	HERV	HERVH	prototype	chr4	162709182	162714747	+	noncoding	AC021134.1	lncRNA	SENSE	ENSG00000248431	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q32.2	HERV	HERVL	oneside	chr4	162754368	162758079	+	noncoding	AC021134.1	lncRNA	SENSE	ENSG00000248431	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q32.2k	HERV	ERVLE	internal	chr4	162783361	162785204	-	noncoding	AC021134.1	lncRNA	ANTISENSE	ENSG00000248431	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q32.2l	HERV	ERVLE	internal	chr4	162876180	162877005	-	noncoding	AC021134.1	lncRNA	ANTISENSE	ENSG00000248431	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q32.2c	HERV	ERV316A3	oneside	chr4	162954811	162957883	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021134.1	ENSG00000248431	47383	AC084752.1	ENSG00000251123	26912	None	None
ERV316A3_4q32.2d	HERV	ERV316A3	oneside	chr4	163047106	163049250	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4454	ENSG00000283468	44324	AC084752.1	ENSG00000251123	61690	None	None
ERVLE_4q32.2m	HERV	ERVLE	oneside	chr4	163065020	163074336	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084752.1	ENSG00000251123	79604	MIR4454	ENSG00000283468	19238	None	None
HERVH_4q32.2b	HERV	HERVH	prototype	chr4	163093170	163097909	+	noncoding	MIR4454	miRNA	ANTISENSE	ENSG00000283468	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q32.2c	HERV	HERVH	prototype	chr4	163099937	163104322	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022272.1	ENSG00000250027	4463	MIR4454	ENSG00000283468	6309	None	None
HUERSP3_4q32.2b	HERV	HUERSP3	internal	chr4	163172346	163180085	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NAF1	ENSG00000145414	5456	AC079238.1	ENSG00000250547	85490	None	None
HUERSP3_4q32.2c	HERV	HUERSP3	internal	chr4	163188107	163195098	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079238.1	ENSG00000250547	70477	NAF1	ENSG00000145414	21217	None	None
ERV316A3_4q32.3a	HERV	ERV316A3	internal	chr4	163690795	163691360	-	noncoding	MARCHF1	protein_coding	SENSE	ENSG00000145416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q32.3a	HERV	ERVLE	internal	chr4	163692740	163693746	+	noncoding	MARCHF1	protein_coding	ANTISENSE	ENSG00000145416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q32.3b	HERV	ERVLE	internal	chr4	163937641	163941670	-	noncoding	MARCHF1	protein_coding	SENSE	ENSG00000145416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_4q32.3	HERV	HERVW	oneside	chr4	164655632	164658152	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-284P	ENSG00000223037	34795	AC074198.1	ENSG00000248162	67158	None	None
HERVL_4q32.3a	HERV	HERVL	internal	chr4	164688412	164692541	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-284P	ENSG00000223037	67575	AC074198.1	ENSG00000248162	32769	None	None
HERVK11_4q32.3	HERV	HERVK11	oneside	chr4	164748862	164753249	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074198.1	ENSG00000248162	22156	SMIM31	ENSG00000248771	815	None	None
HERVL74_4q32.3	HERV	HERVL74	internal	chr4	164949906	164952642	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC106872.1	ENSG00000236941	468	TRIM61	ENSG00000183439	1804	None	None
HML2_4q32.3	HERV	HML2	prototype	chr4	164995688	165002916	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC106872.4	ENSG00000248229	7901	AC106872.9	ENSG00000250887	4170	None	None
HERVL_4q32.3b	HERV	HERVL	oneside	chr4	165124589	165127909	+	noncoding	TMEM192	protein_coding	ANTISENSE	ENSG00000170088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_4q32.3	HERV	HERVFRD	prototype	chr4	165470030	165476747	-	noncoding	CPE	protein_coding	ANTISENSE	ENSG00000109472	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q32.3b	HERV	ERV316A3	oneside	chr4	165735144	165736514	+	noncoding	AC080079.2,LINC01179	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000287424,ENSG00000249500	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q32.3c	HERV	ERVLE	internal	chr4	165749305	165749956	+	noncoding	AC080079.2,LINC01179	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000287424,ENSG00000249500	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q32.3d	HERV	ERVLE	internal	chr4	165753076	165754632	-	noncoding	AC080079.2,LINC01179	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000287424,ENSG00000249500	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q32.3c	HERV	ERV316A3	oneside	chr4	165971222	165975281	-	noncoding	TLL1	protein_coding	ANTISENSE	ENSG00000038295	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_4q32.3	HERV	MER61	prototype	chr4	166198160	166203451	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TLL1	ENSG00000038295	93703	AC107055.1	ENSG00000206711	109484	None	chr4:166198263-166198306,chr4:166198316-166198329
ERVLB4_4q32.3a	HERV	ERVLB4	internal	chr4	166434101	166436782	+	noncoding	AC097487.1	lncRNA	ANTISENSE	ENSG00000249675	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:166435085-166435089	None
HERVH_4q32.3a	HERV	HERVH	prototype	chr4	166520700	166526430	+	noncoding	AC097487.1	lncRNA	ANTISENSE	ENSG00000249675	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q32.3b	HERV	ERVLB4	internal	chr4	166629710	166631888	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097487.1	ENSG00000249675	103591	SPOCK3	ENSG00000196104	101496	None	None
ERV316A3_4q32.3d	HERV	ERV316A3	oneside	chr4	166656293	166658246	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097487.1	ENSG00000249675	130174	SPOCK3	ENSG00000196104	75138	None	None
HERVL_4q32.3c	HERV	HERVL	oneside	chr4	166705636	166706841	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097487.1	ENSG00000249675	179517	SPOCK3	ENSG00000196104	26543	None	None
HERVH_4q32.3b	HERV	HERVH	prototype	chr4	166716125	166722054	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097487.1	ENSG00000249675	190006	SPOCK3	ENSG00000196104	11330	None	None
HERVL40_4q32.3a	HERV	HERVL40	oneside	chr4	166898452	166902117	+	noncoding	SPOCK3	protein_coding	ANTISENSE	ENSG00000196104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q32.3e	HERV	ERVLE	internal	chr4	167021995	167023223	+	noncoding	SPOCK3	protein_coding	ANTISENSE	ENSG00000196104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q32.3e	HERV	ERV316A3	oneside	chr4	167407423	167408491	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL776P	ENSG00000240772	6661	PHBP14	ENSG00000248913	239939	None	None
HUERSP3_4q32.3a	HERV	HUERSP3	prototype	chr4	167416414	167424407	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL776P	ENSG00000240772	15652	PHBP14	ENSG00000248913	224023	None	None
ERVLE_4q32.3f	HERV	ERVLE	internal	chr4	167433615	167434314	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL776P	ENSG00000240772	32853	PHBP14	ENSG00000248913	214116	None	None
HERVH_4q32.3c	HERV	HERVH	prototype	chr4	167436066	167441183	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PHBP14	ENSG00000248913	207247	RN7SL776P	ENSG00000240772	35304	None	None
MER4_4q32.3	HERV	MER4	oneside	chr4	167577402	167583949	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PHBP14	ENSG00000248913	64481	RN7SL776P	ENSG00000240772	176640	None	None
HERVH_4q32.3d	HERV	HERVH	prototype	chr4	167876312	167882021	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105148.1	ENSG00000270336	134025	AC116634.1	ENSG00000248601	64653	None	None
HERVH_4q32.3e	HERV	HERVH	prototype	chr4	167922851	167928626	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105148.1	ENSG00000270336	180564	AC116634.1	ENSG00000248601	18048	None	None
ERV316A3_4q32.3f	HERV	ERV316A3	prototype	chr4	168013893	168017945	-	noncoding	AC116634.1	lncRNA	SENSE	ENSG00000248601	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_4q32.3b	HERV	HUERSP3	internal	chr4	168026356	168029614	-	noncoding	AC116634.1	lncRNA	SENSE	ENSG00000248601	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_4q32.3b	HERV	HERVL40	internal	chr4	168144146	168148595	-	noncoding	ANXA10	protein_coding	ANTISENSE	ENSG00000109511	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q32.3c	HERV	ERVLB4	oneside	chr4	168434326	168439585	+	noncoding	DDX60L	protein_coding	ANTISENSE	ENSG00000181381	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q32.3g	HERV	ERVLE	internal	chr4	168968326	168969306	-	noncoding	CBR4	protein_coding	SENSE	ENSG00000145439	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q33	HERV	ERVLB4	oneside	chr4	169302746	169303952	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NEK1	ENSG00000137601	88905	SH3RF1	ENSG00000154447	31790	None	None
HERVL_4q33a	HERV	HERVL	oneside	chr4	169316551	169318145	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SH3RF1	ENSG00000154447	45595	NEK1	ENSG00000137601	74712	None	None
HERVL_4q33b	HERV	HERVL	oneside	chr4	169323856	169327642	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SH3RF1	ENSG00000154447	52900	NEK1	ENSG00000137601	65215	None	None
HERVL40_4q33	HERV	HERVL40	prototype	chr4	169336002	169344307	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NEK1	ENSG00000137601	48550	SH3RF1	ENSG00000154447	65046	None	None
HERVFRD_4q33	HERV	HERVFRD	oneside	chr4	170106215	170107331	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	APOBEC3AP1	ENSG00000248822	6111	AC069306.1	ENSG00000248739	33961	None	None
HERVH_4q33a	HERV	HERVH	prototype	chr4	170116430	170122158	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	APOBEC3AP1	ENSG00000248822	16326	AC069306.1	ENSG00000248739	19134	None	None
HERVK14C_4q33	HERV	HERVK14C	oneside	chr4	170126352	170133883	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069306.1	ENSG00000248739	7409	APOBEC3AP1	ENSG00000248822	26248	None	None
HERVL32_4q33	HERV	HERVL32	oneside	chr4	170136462	170137737	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069306.1	ENSG00000248739	3555	APOBEC3AP1	ENSG00000248822	36358	None	None
HERVW_4q33a	HERV	HERVW	oneside	chr4	170190193	170191502	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01612	ENSG00000250266	35033	AC069306.1	ENSG00000248739	47661	None	None
HERVW_4q33b	HERV	HERVW	internal	chr4	170191574	170195620	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01612	ENSG00000250266	30915	AC069306.1	ENSG00000248739	49042	None	None
ERVLE_4q33a	HERV	ERVLE	internal	chr4	170295043	170296738	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01612	ENSG00000250266	11320	LINC02512	ENSG00000251061	46351	None	None
HERVH_4q33b	HERV	HERVH	prototype	chr4	170677696	170682334	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSP90AA6P	ENSG00000181359	72246	LINC02382	ENSG00000250968	60135	None	None
HERVIP10FH_4q33	HERV	HERVIP10FH	internal	chr4	170684674	170686131	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSP90AA6P	ENSG00000181359	79224	LINC02382	ENSG00000250968	56338	None	None
HERVE_4q33	HERV	HERVE	oneside	chr4	170686572	170690609	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSP90AA6P	ENSG00000181359	81122	LINC02382	ENSG00000250968	51860	None	None
MER34B_4q33	HERV	MER34B	internal	chr4	170793337	170795198	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02382	ENSG00000250968	49619	AC097486.1	ENSG00000249943	19141	None	None
ERVL_4q33	HERV	ERVL	internal	chr4	170837613	170838208	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6ATAC13P	ENSG00000251961	53259	AC097486.1	ENSG00000249943	23065	None	None
ERVLE_4q33b	HERV	ERVLE	internal	chr4	170992889	170997721	-	noncoding	AC034159.2	lncRNA	ANTISENSE	ENSG00000286580	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_4q34.1a	HERV	HERVL40	internal	chr4	171031066	171031676	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02431	ENSG00000248872	8888	AC034159.2	ENSG00000286580	36410	None	None
MER101_4q34.1a	HERV	MER101	internal	chr4	171053426	171056189	+	coding	LINC02431	lncRNA	SENSE	ENSG00000248872	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q34.1a	HERV	ERVLE	internal	chr4	171122070	171123620	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC034159.1	ENSG00000249525	7489	AC092639.1	ENSG00000248755	45589	None	None
ERV316A3_4q34.1a	HERV	ERV316A3	oneside	chr4	171133932	171138794	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC034159.1	ENSG00000249525	19351	AC092639.1	ENSG00000248755	30415	None	None
ERV316A3_4q34.1b	HERV	ERV316A3	oneside	chr4	171148853	171153744	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092639.1	ENSG00000248755	15465	AC034159.1	ENSG00000249525	34272	None	None
ERVLE_4q34.1b	HERV	ERVLE	internal	chr4	171202312	171203944	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02504	ENSG00000248339	85531	MIR6082	ENSG00000278502	16020	None	None
ERVLE_4q34.1c	HERV	ERVLE	internal	chr4	171224326	171226091	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR6082	ENSG00000278502	38034	LINC02504	ENSG00000248339	63384	None	None
ERVLE_4q34.1d	HERV	ERVLE	internal	chr4	171407754	171409604	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02504	ENSG00000248339	109487	AC074254.2	ENSG00000287210	85080	None	None
MER34B_4q34.1a	HERV	MER34B	internal	chr4	171576668	171577480	-	noncoding	LINC02174	lncRNA	SENSE	ENSG00000249297	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_4q34.1a	HERV	MER41	internal	chr4	171578431	171582849	-	noncoding	LINC02174	lncRNA	SENSE	ENSG00000249297	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER34B_4q34.1b	HERV	MER34B	internal	chr4	171585448	171587177	-	noncoding	LINC02174	lncRNA	SENSE	ENSG00000249297	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q34.1	HERV	ERVLB4	internal	chr4	171667200	171668427	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02174	ENSG00000249297	28437	GALNTL6	ENSG00000174473	143827	None	None
HERVL_4q34.1a	HERV	HERVL	oneside	chr4	171721074	171722694	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GALNTL6	ENSG00000174473	89560	LINC02174	ENSG00000249297	82311	None	None
ERV316A3_4q34.1c	HERV	ERV316A3	oneside	chr4	171792731	171796675	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GALNTL6	ENSG00000174473	15579	LINC02174	ENSG00000249297	153968	None	None
MER41_4q34.1b	HERV	MER41	prototype	chr4	171960908	171962759	+	noncoding	GALNTL6	protein_coding	SENSE	ENSG00000174473	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q34.1a	HERV	HERVH	oneside	chr4	171986106	171990127	-	noncoding	GALNTL6	protein_coding	ANTISENSE	ENSG00000174473	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_4q34.1b	HERV	MER101	internal	chr4	172122878	172126338	-	coding	GALNTL6	protein_coding	ANTISENSE	ENSG00000174473	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q34.1e	HERV	ERVLE	internal	chr4	172741891	172744768	-	noncoding	GALNTL6	protein_coding	ANTISENSE	ENSG00000174473	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q34.1b	HERV	HERVH	prototype	chr4	172955660	172962312	-	noncoding	GALNTL6	protein_coding	ANTISENSE	ENSG00000174473	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q34.1f	HERV	ERVLE	internal	chr4	173059498	173060497	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105285.1	ENSG00000245213	34371	GALNTL6	ENSG00000174473	17939	None	None
HARLEQUIN_4q34.1	HERV	HARLEQUIN	prototype	chr4	173098691	173106239	+	noncoding	AC105285.1	lncRNA	ANTISENSE	ENSG00000245213	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_4q34.1a	HERV	LTR25	internal	chr4	173282514	173289284	-	noncoding	GALNT7	protein_coding	ANTISENSE	ENSG00000109586	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q34.1g	HERV	ERVLE	internal	chr4	173756255	173758088	+	noncoding	LINC02269	lncRNA	SENSE	ENSG00000250708	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_4q34.1b	HERV	HERVL40	oneside	chr4	174188414	174191719	-	noncoding	LINC02268	lncRNA	SENSE	ENSG00000248174	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_4q34.1a	HERV	MER4	prototype	chr4	174366422	174369783	+	noncoding	AC116616.1	lncRNA	ANTISENSE	ENSG00000249875	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_4q34.1b	HERV	MER4	oneside	chr4	174605846	174609195	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096751.2	ENSG00000251584	64799	GLRA3	ENSG00000145451	27725	None	None
MER4_4q34.1c	HERV	MER4	internal	chr4	174609218	174611108	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096751.2	ENSG00000251584	68171	GLRA3	ENSG00000145451	25812	None	None
MER41_4q34.1c	HERV	MER41	internal	chr4	174611635	174612297	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096751.2	ENSG00000251584	70588	GLRA3	ENSG00000145451	24623	None	None
ERVLE_4q34.1h	HERV	ERVLE	internal	chr4	174749466	174750717	+	noncoding	GLRA3	protein_coding	ANTISENSE	ENSG00000145451	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_4q34.1c	HERV	HERVL40	oneside	chr4	174863637	174866852	+	noncoding	ADAM29	protein_coding	SENSE	ENSG00000168594	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q34.1b	HERV	HERVL	internal	chr4	174874958	174876690	-	noncoding	ADAM29	protein_coding	ANTISENSE	ENSG00000168594	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4q34.1c	HERV	HERVL	oneside	chr4	174979197	174982832	-	coding	AC105914.2	lncRNA	SENSE	ENSG00000250431	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_4q34.1a	HERV	HML3	oneside	chr4	174982833	174989048	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022325.1	ENSG00000249411	27968	AC105914.2	ENSG00000250431	3452	None	None
HML3_4q34.1b	HERV	HML3	oneside	chr4	174989106	174990600	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC022325.1	ENSG00000249411	26416	AC105914.2	ENSG00000250431	9725	None	None
HERVL_4q34.1d	HERV	HERVL	oneside	chr4	174990601	174993529	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022325.1	ENSG00000249411	23487	AC105914.2	ENSG00000250431	11220	None	None
LTR25_4q34.1b	HERV	LTR25	internal	chr4	175213921	175216500	+	coding	AC022325.2	lncRNA	ANTISENSE	ENSG00000286494	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_4q34.1	HERV	HUERSP2	prototype	chr4	175252128	175255566	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022325.2	ENSG00000286494	15459	AC095050.2	ENSG00000249284	31039	None	None
ERVLE_4q34.2a	HERV	ERVLE	internal	chr4	175406987	175410855	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC095050.1	ENSG00000248551	3877	AC131094.1	ENSG00000249945	46871	None	None
PRIMA41_4q34.2	HERV	PRIMA41	tandem*	chr4	175444248	175456817	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC131094.1	ENSG00000249945	909	AC095050.1	ENSG00000248551	41138	None	chr4:175451471-175451508
HERVH_4q34.2a	HERV	HERVH	prototype	chr4	175461167	175467186	-	noncoding	AC131094.1	lncRNA	SENSE	ENSG00000249945	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_4q34.2	HERV	HERVL40	oneside	chr4	176283103	176287051	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC019163.1	ENSG00000248980	21217	ASB5	ENSG00000164122	5532	None	None
HERVH_4q34.2b	HERV	HERVH	prototype	chr4	176294237	176300348	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC019163.1	ENSG00000248980	7920	ASB5	ENSG00000164122	16666	None	None
HML3_4q34.2	HERV	HML3	prototype	chr4	176343740	176350769	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SPCS3	ENSG00000129128	11495	AC093801.2	ENSG00000248480	280623	None	None
MER4_4q34.2a	HERV	MER4	oneside	chr4	176351121	176355582	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093801.2	ENSG00000248480	275810	SPCS3	ENSG00000129128	18876	None	None
MER4_4q34.2b	HERV	MER4	unknown	chr4	176355827	176359240	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093801.2	ENSG00000248480	272152	SPCS3	ENSG00000129128	23582	None	None
ERVLE_4q34.2b	HERV	ERVLE	internal	chr4	176532525	176535531	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPCS3	ENSG00000129128	200280	AC093801.2	ENSG00000248480	95861	None	None
ERV316A3_4q34.2	HERV	ERV316A3	internal	chr4	176536444	176537836	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093801.2	ENSG00000248480	93556	SPCS3	ENSG00000129128	204199	None	None
ERVLE_4q34.2c	HERV	ERVLE	internal	chr4	176592712	176595670	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPCS3	ENSG00000129128	260467	AC093801.2	ENSG00000248480	35722	None	None
ERVLE_4q34.3a	HERV	ERVLE	internal	chr4	176931105	176932838	-	noncoding	AC097518.2	lncRNA	SENSE	ENSG00000287544	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_4q34.3	HERV	HERVL40	oneside	chr4	176969913	176972743	+	noncoding	AC097518.2	lncRNA	ANTISENSE	ENSG00000287544	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q34.3b	HERV	ERVLE	internal	chr4	176992722	176996113	-	noncoding	AC097518.2	lncRNA	SENSE	ENSG00000287544	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q34.3c	HERV	ERVLE	internal	chr4	177050454	177051067	-	noncoding	AC097518.2	lncRNA	SENSE	ENSG00000287544	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q34.3d	HERV	ERVLE	internal	chr4	177051202	177052156	+	noncoding	AC097518.2	lncRNA	ANTISENSE	ENSG00000287544	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q34.3a	HERV	ERV316A3	internal	chr4	177107467	177110159	+	noncoding	AC097518.2	lncRNA	ANTISENSE	ENSG00000287544	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q34.3e	HERV	ERVLE	internal	chr4	177260470	177263635	+	noncoding	AC097518.2	lncRNA	ANTISENSE	ENSG00000287544	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q34.3f	HERV	ERVLE	internal	chr4	177487524	177490452	-	noncoding	AC078881.1	lncRNA	ANTISENSE	ENSG00000250131	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q34.3g	HERV	ERVLE	internal	chr4	177708891	177710425	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01098	ENSG00000231171	18332	AC103879.1	ENSG00000251416	17823	None	None
ERVLE_4q34.3h	HERV	ERVLE	internal	chr4	177713313	177716081	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01098	ENSG00000231171	12676	AC103879.1	ENSG00000251416	22245	None	None
ERVLB4_4q34.3a	HERV	ERVLB4	internal	chr4	177761793	177765044	-	noncoding	LINC01098,LINC01099	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000231171,ENSG00000251504	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q34.3b	HERV	ERVLB4	oneside	chr4	177922457	177923507	-	noncoding	LINC01098	lncRNA	ANTISENSE	ENSG00000231171	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_4q34.3	HERV	HERVL18	prototype	chr4	178136542	178143132	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-45P	ENSG00000253000	19681	AC095041.1	ENSG00000241877	143563	None	None
HERVH_4q34.3a	HERV	HERVH	prototype	chr4	178207120	178213342	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-45P	ENSG00000253000	90259	AC095041.1	ENSG00000241877	73353	None	None
LTR25_4q34.3	HERV	LTR25	internal	chr4	178271273	178273109	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-45P	ENSG00000253000	154412	AC095041.1	ENSG00000241877	13586	None	None
MER61_4q34.3	HERV	MER61	oneside	chr4	178273100	178276397	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-45P	ENSG00000253000	156239	AC095041.1	ENSG00000241877	10298	None	None
ERVLB4_4q34.3c	HERV	ERVLB4	internal	chr4	178591572	178592956	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP173	ENSG00000201727	184742	AC017087.1	ENSG00000212191	92930	None	None
ERVLE_4q34.3i	HERV	ERVLE	internal	chr4	178663707	178665992	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP173	ENSG00000201727	256877	AC017087.1	ENSG00000212191	19894	None	None
HUERSP3B_4q34.3	HERV	HUERSP3B	oneside	chr4	178820877	178822524	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018710.1	ENSG00000250839	246913	AC017087.1	ENSG00000212191	134921	None	None
ERVLE_4q34.3j	HERV	ERVLE	internal	chr4	178954691	178955997	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018710.1	ENSG00000250839	113440	AC017087.1	ENSG00000212191	268735	None	None
HERVH_4q34.3b	HERV	HERVH	prototype	chr4	179166476	179170568	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC020551.1	ENSG00000250993	218566	AC018710.1	ENSG00000250839	96882	chr4:179170222-179170557	chr4:179167327-179167353,chr4:179167578-179167605,chr4:179169515-179169519
ERVLE_4q34.3k	HERV	ERVLE	internal	chr4	179212887	179217724	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018710.1	ENSG00000250839	143293	AC020551.1	ENSG00000250993	171410	None	None
ERV316A3_4q34.3b	HERV	ERV316A3	prototype	chr4	179220300	179226576	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018710.1	ENSG00000250839	150706	AC020551.1	ENSG00000250993	162558	None	None
HERVFRD_4q34.3	HERV	HERVFRD	internal	chr4	179257567	179260384	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC020551.1	ENSG00000250993	128750	AC018710.1	ENSG00000250839	187973	None	None
HERVL_4q34.3a	HERV	HERVL	oneside	chr4	179260385	179262165	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018710.1	ENSG00000250839	190791	AC020551.1	ENSG00000250993	126969	None	None
HERVL_4q34.3b	HERV	HERVL	oneside	chr4	179299455	179300557	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC020551.1	ENSG00000250993	88577	AC018710.1	ENSG00000250839	229861	None	None
ERVLB4_4q34.3d	HERV	ERVLB4	oneside	chr4	179324461	179326260	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC020551.1	ENSG00000250993	62874	AC018710.1	ENSG00000250839	254867	None	None
ERVLB4_4q34.3e	HERV	ERVLB4	internal	chr4	179390098	179392471	-	noncoding	AC020551.1	lncRNA	SENSE	ENSG00000250993	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q34.3c	HERV	HERVH	prototype	chr4	179403518	179409294	+	noncoding	AC020551.1	lncRNA	ANTISENSE	ENSG00000250993	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q34.3l	HERV	ERVLE	oneside	chr4	179432281	179435611	-	noncoding	AC020551.1	lncRNA	SENSE	ENSG00000250993	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q34.3f	HERV	ERVLB4	prototype	chr4	179485015	179489609	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021193.1	ENSG00000248921	367244	AC020551.1	ENSG00000250993	19710	None	None
HERVH_4q34.3d	HERV	HERVH	prototype	chr4	179720525	179726896	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC020551.1	ENSG00000250993	255220	AC021193.1	ENSG00000248921	129957	None	None
PABLA_4q34.3	HERV	PABLA	internal	chr4	179774022	179778102	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC020551.1	ENSG00000250993	308717	AC021193.1	ENSG00000248921	78751	None	None
ERVLE_4q34.3m	HERV	ERVLE	oneside	chr4	179828213	179833723	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC020551.1	ENSG00000250993	362908	AC021193.1	ENSG00000248921	23130	None	None
ERV316A3_4q34.3c	HERV	ERV316A3	internal	chr4	179855351	179856604	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021193.1	ENSG00000248921	249	AC020551.1	ENSG00000250993	390046	None	None
HUERSP1_4q34.3	HERV	HUERSP1	internal	chr4	182263193	182268471	+	noncoding	TENM3	protein_coding	SENSE	ENSG00000218336	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q35.1a	HERV	HERVH	prototype	chr4	182814310	182818919	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TENM3	ENSG00000218336	11286	AC114798.1	ENSG00000286119	9181	None	None
ERVLE_4q35.1a	HERV	ERVLE	internal	chr4	182953790	182956090	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DCTD	ENSG00000129187	35854	AC019193.4	ENSG00000286821	61336	None	None
HERVW_4q35.1	HERV	HERVW	oneside	chr4	182999393	183004400	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DCTD	ENSG00000129187	81457	AC019193.4	ENSG00000286821	13026	None	None
ERV316A3_4q35.1	HERV	ERV316A3	prototype	chr4	183068724	183070206	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC019193.3	ENSG00000273180	5274	FAM92A1P2	ENSG00000230219	28605	None	None
ERVLE_4q35.1b	HERV	ERVLE	oneside	chr4	183762718	183764782	-	noncoding	AC108477.1	lncRNA	SENSE	ENSG00000283383	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q35.1c	HERV	ERVLE	internal	chr4	184041626	184042210	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107222.1	ENSG00000250726	30193	STOX2	ENSG00000173320	18100	None	None
HML1_4q35.1	HERV	HML1	prototype	chr4	184909081	184913127	-	noncoding	AC084871.3	processed_pseudogene	SENSE	ENSG00000251147	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV9_4q35.1	HERV	HERV9	oneside	chr4	184914735	184920481	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4455	ENSG00000263458	17902	AC084871.3	ENSG00000251147	3383	None	None
HML3_4q35.1	HERV	HML3	prototype	chr4	185044790	185051686	-	coding	LINC02436	lncRNA	ANTISENSE	ENSG00000250754	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
LTR19_4q35.1	HERV	LTR19	prototype	chr4	185324325	185330494	-	noncoding	SNX25	protein_coding	ANTISENSE	ENSG00000109762	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q35.1b	HERV	HERVH	prototype	chr4	186044023	186049672	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TLR3	ENSG00000164342	19480	RNU4-64P	ENSG00000222727	17437	None	None
HERVL74_4q35.1	HERV	HERVL74	oneside	chr4	186056030	186059149	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU4-64P	ENSG00000222727	29444	TLR3	ENSG00000164342	10003	None	chr4:186058933-186058941,chr4:186058959-186058973
HERVL_4q35.2	HERV	HERVL	oneside	chr4	186218743	186220390	-	noncoding	KLKB1	protein_coding	ANTISENSE	ENSG00000164344	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4q35.2a	HERV	HERVH	prototype	chr4	186241956	186247584	-	noncoding	KLKB1	protein_coding	ANTISENSE	ENSG00000164344	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:186247136-186247533	chr4:186242254-186242276,chr4:186242280-186242285,chr4:186243442-186243452,chr4:186247241-186247253
ERVLE_4q35.2a	HERV	ERVLE	internal	chr4	186509648	186511737	-	noncoding	AC018709.1	protein_coding	SENSE	ENSG00000272297	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q35.2a	HERV	ERV316A3	oneside	chr4	186513234	186516728	+	noncoding	AC018709.1	protein_coding	ANTISENSE	ENSG00000272297	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q35.2b	HERV	ERVLE	oneside	chr4	186538549	186543865	+	noncoding	AC018709.1,MTNR1A	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000272297,ENSG00000168412	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4q35.2c	HERV	ERVLE	internal	chr4	186831560	186833270	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAT1	ENSG00000083857	104838	AC108865.1	ENSG00000250829	57699	chr4:186831368-186831730	None
ERV316A3_4q35.2b	HERV	ERV316A3	internal	chr4	187330685	187333812	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097652.1	ENSG00000250658	21003	LINC02514	ENSG00000250042	36836	None	None
ERV316A3_4q35.2c	HERV	ERV316A3	oneside	chr4	187648954	187650752	+	noncoding	LINC02492,AC097521.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000250590,ENSG00000249642	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4q35.2a	HERV	ERVLB4	oneside	chr4	187761091	187765125	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108073.3	ENSG00000286641	177039	ADAM20P3	ENSG00000249162	12892	None	None
MER4_4q35.2	HERV	MER4	prototype	chr4	187770327	187775598	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108073.3	ENSG00000286641	166566	ADAM20P3	ENSG00000249162	22128	None	None
ERVLB4_4q35.2b	HERV	ERVLB4	internal	chr4	188573146	188575550	+	noncoding	LINC01060	lncRNA	SENSE	ENSG00000249378	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_4q35.2d	HERV	ERV316A3	oneside	chr4	188915325	188916693	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC122138.1	ENSG00000250024	74022	AC093909.4	ENSG00000250626	96803	None	None
ERV316A3_4q35.2e	HERV	ERV316A3	oneside	chr4	188920612	188921555	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093909.4	ENSG00000250626	102090	AC122138.1	ENSG00000250024	69160	None	None
HUERSP1_4q35.2	HERV	HUERSP1	oneside	chr4	188930440	188934637	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093909.4	ENSG00000250626	111918	AC122138.1	ENSG00000250024	56078	None	None
MER41_4q35.2	HERV	MER41	internal	chr4	189108411	189110238	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC122138.1	ENSG00000250024	106336	AC107391.1	ENSG00000251310	82862	None	None
ERV316A3_4q35.2f	HERV	ERV316A3	oneside	chr4	189143394	189144661	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107391.1	ENSG00000251310	48439	AC122138.1	ENSG00000250024	141319	None	None
HERVH_4q35.2b	HERV	HERVH	prototype	chr4	189479539	189485403	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01262	ENSG00000250739	174202	HSP90AA4P	ENSG00000205100	4347	None	None
HERVL32_4q35.2a	HERV	HERVL32	oneside	chr4	189599108	189600854	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSP90AA4P	ENSG00000205100	123916	LINC01262	ENSG00000250739	58751	None	None
HERVL32_4q35.2b	HERV	HERVL32	oneside	chr4	189600961	189602240	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSP90AA4P	ENSG00000205100	125769	LINC01262	ENSG00000250739	57365	None	None
HERVH_4q35.2c	HERV	HERVH	prototype	chr4	189925901	189931855	+	noncoding	FRG1-DT	lncRNA	ANTISENSE	ENSG00000245685	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_4q35.2	HERV	PRIMA41	internal	chr4	189985004	189989814	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP174	ENSG00000199572	25324	TUBB7P	ENSG00000251297	133	None	None
HML2_4q35.2	HERV	HML2	prototype	chr4	190106259	190113546	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DUX4	ENSG00000260596	60228	DUX4L2	ENSG00000280457	13980	None	None
HML3_5p15.33a	HERV	HML3	oneside	chr5	242196	246105	+	noncoding	SDHA,AC021087.5	protein_coding,protein_coding	SENSE,SENSE	ENSG00000073578,ENSG00000286001	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_5p15.33b	HERV	HML3	oneside	chr5	246171	249795	+	noncoding	SDHA,AC021087.5	protein_coding,protein_coding	SENSE,SENSE	ENSG00000073578,ENSG00000286001	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_5p15.33	HERV	HERVH	prototype	chr5	702471	708501	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TPPP	ENSG00000171368	9119	ZDHHC11B	ENSG00000206077	1854	None	None
ERVLE_5p15.33a	HERV	ERVLE	internal	chr5	1448685	1450102	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC6A3	ENSG00000142319	3245	LPCAT1	ENSG00000153395	6378	None	None
ERVLE_5p15.33b	HERV	ERVLE	internal	chr5	1457100	1458728	+	noncoding	LPCAT1	protein_coding	ANTISENSE	ENSG00000153395	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HML3_5p15.33c	HERV	HML3	oneside	chr5	1577862	1580973	-	noncoding	SDHAP3	transcribed_unprocessed_pseudogene	SENSE	ENSG00000185986	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_5p15.33d	HERV	HML3	oneside	chr5	1581038	1585387	-	noncoding	SDHAP3	transcribed_unprocessed_pseudogene	SENSE	ENSG00000185986	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5p15.33a	HERV	ERVLB4	internal	chr5	1860328	1865142	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IRX4	ENSG00000113430	12271	AC025183.3	ENSG00000279222	438	None	None
HERVL_5p15.33a	HERV	HERVL	oneside	chr5	2243576	2246102	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138982.1	ENSG00000201026	58756	AC092266.1	ENSG00000275733	15757	None	None
ERV316A3_5p15.33	HERV	ERV316A3	internal	chr5	3217461	3219555	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091832.1	ENSG00000249808	35974	LINC01019	ENSG00000248118	137709	None	None
ERVL_5p15.33	HERV	ERVL	oneside	chr5	3242498	3243953	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01019	ENSG00000248118	113311	AC091832.1	ENSG00000249808	61011	None	None
ERVLB4_5p15.33b	HERV	ERVLB4	oneside	chr5	3294398	3295969	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091832.1	ENSG00000249808	112911	LINC01019	ENSG00000248118	61295	None	None
HERVL_5p15.33b	HERV	HERVL	internal	chr5	3847418	3848141	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IRX1	ENSG00000170549	246015	AC025773.1	ENSG00000248962	164567	None	None
HERVL_5p15.33c	HERV	HERVL	prototype	chr5	3947660	3954207	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025773.1	ENSG00000248962	58501	IRX1	ENSG00000170549	346257	None	None
HERVL_5p15.32a	HERV	HERVL	prototype	chr5	4458896	4465816	+	noncoding	AC106799.2	lncRNA	ANTISENSE	ENSG00000248973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5p15.32a	HERV	ERV316A3	oneside	chr5	4534519	4540889	+	noncoding	AC106799.2	lncRNA	ANTISENSE	ENSG00000248973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5p15.32b	HERV	ERV316A3	oneside	chr5	4783978	4786072	+	noncoding	AC106799.2,AC026719.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000248973,ENSG00000248311	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5p15.32c	HERV	ERV316A3	oneside	chr5	5032844	5034464	-	noncoding	AC010451.1,LINC01020	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000250481,ENSG00000215231	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_5p15.32b	HERV	HERVL	oneside	chr5	5090379	5091825	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP73	ENSG00000223007	34221	LINC02121	ENSG00000250529	12068	None	None
ERVLE_5p15.32a	HERV	ERVLE	internal	chr5	5403904	5406675	-	noncoding	AC091978.1	lncRNA	SENSE	ENSG00000286753	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_5p15.32	HERV	HERVH	prototype	chr5	5515523	5521164	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ICE1	ENSG00000164151	25303	AC026736.1	ENSG00000286986	167641	None	None
ERV316A3_5p15.32d	HERV	ERV316A3	prototype	chr5	5598492	5601157	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026736.1	ENSG00000286986	87648	ICE1	ENSG00000164151	108272	None	None
MER61_5p15.32	HERV	MER61	prototype	chr5	5694482	5699708	+	noncoding	AC026736.1	lncRNA	SENSE	ENSG00000286986	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5p15.32b	HERV	ERVLE	internal	chr5	5738978	5740902	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010266.2	ENSG00000261037	278127	AC026736.1	ENSG00000286986	44236	None	chr5:5739380-5739385
HERVL_5p15.32c	HERV	HERVL	internal	chr5	6150507	6153488	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P3	ENSG00000250730	136369	AC026797.1	ENSG00000278913	13336	None	None
MER101_5p15.31a	HERV	MER101	internal	chr5	6510975	6515917	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027334.1	ENSG00000271230	16974	UBE2QL1	ENSG00000215218	14252	None	None
MER101_5p15.31b	HERV	MER101	internal	chr5	6516142	6516956	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027334.1	ENSG00000271230	15935	UBE2QL1	ENSG00000215218	19419	None	None
ERVLE_5p15.31a	HERV	ERVLE	internal	chr5	6680307	6681281	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SRD5A1	ENSG00000145545	5921	LINC02102	ENSG00000248677	5044	None	None
HUERSP2_5p15.31	HERV	HUERSP2	prototype	chr5	7018935	7023458	-	noncoding	LINC02196	lncRNA	ANTISENSE	ENSG00000250974	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_5p15.31	HERV	MER4	oneside	chr5	7030305	7033146	-	coding	LINC02196	lncRNA	ANTISENSE	ENSG00000250974	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_5p15.31a	HERV	HERVH	prototype	chr5	7055005	7063741	-	noncoding	LINC02196	lncRNA	ANTISENSE	ENSG00000250974	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_5p15.31b	HERV	HERVH	prototype	chr5	7263580	7269331	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091951.2	ENSG00000237611	23562	AC091951.5	ENSG00000285689	3461	None	chr5:7264594-7264622
ERV316A3_5p15.31	HERV	ERV316A3	prototype	chr5	7879635	7882319	-	noncoding	MTRR	protein_coding	ANTISENSE	ENSG00000124275	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:7881931-7882312	None
HERVH_5p15.31c	HERV	HERVH	oneside	chr5	8414064	8416549	+	noncoding	LINC02226,AC091965.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000245729,ENSG00000249159	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5p15.31b	HERV	ERVLE	internal	chr5	8449764	8451822	+	noncoding	LINC02226,AC091965.1,MIR4458HG	lncRNA,lncRNA,lncRNA	ANTISENSE,ANTISENSE,SENSE	ENSG00000245729,ENSG00000249159,ENSG00000247516	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_5p15.31	HERV	PRIMA4	internal	chr5	8482076	8483627	+	noncoding	MIR4458HG	lncRNA	SENSE	ENSG00000247516	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5p15.31	HERV	ERVLB4	unknown	chr5	8662542	8668668	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091953.2	ENSG00000279002	2483	AC091953.6	ENSG00000280373	350	None	None
HERVL_5p15.31	HERV	HERVL	internal	chr5	8738343	8740271	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091932.2	ENSG00000278877	14598	AC091932.4	ENSG00000280438	20460	None	None
ERVLE_5p15.31c	HERV	ERVLE	internal	chr5	8894638	8896735	+	noncoding	LINC02199	lncRNA	SENSE	ENSG00000250198	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_5p15.31d	HERV	HERVH	oneside	chr5	8998372	9002474	-	noncoding	AC021088.1	lncRNA	ANTISENSE	ENSG00000250619	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_5p15.31e	HERV	HERVH	internal	chr5	9007788	9009557	-	noncoding	AC021088.1	lncRNA	ANTISENSE	ENSG00000250619	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5p15.31d	HERV	ERVLE	internal	chr5	9836732	9837508	+	noncoding	LINC02112	lncRNA	ANTISENSE	ENSG00000249781	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5p15.2a	HERV	ERVLE	internal	chr5	10112043	10113228	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091905.4	ENSG00000280016	29271	AC034229.1	ENSG00000249807	23910	None	None
HERVL_5p15.2a	HERV	HERVL	oneside	chr5	10716384	10720094	+	noncoding	DAP	protein_coding	ANTISENSE	ENSG00000112977	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5p15.2b	HERV	HERVL	oneside	chr5	10720111	10722498	+	noncoding	DAP	protein_coding	ANTISENSE	ENSG00000112977	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:10722317-10722382	None
ERVLE_5p15.2b	HERV	ERVLE	internal	chr5	12266049	12266860	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-679P	ENSG00000212305	30539	CTNND2	ENSG00000169862	361603	None	None
ERVLE_5p15.2c	HERV	ERVLE	oneside	chr5	12273370	12275147	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTNND2	ENSG00000169862	368924	RNU6-679P	ENSG00000212305	22252	None	None
HERVL40_5p15.2	HERV	HERVL40	internal	chr5	12338677	12339518	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC106771.1	ENSG00000248783	214372	RNU6-679P	ENSG00000212305	41173	None	None
ERVLE_5p15.2d	HERV	ERVLE	internal	chr5	12460303	12463124	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-679P	ENSG00000212305	162799	AC106771.1	ENSG00000248783	90766	None	None
HERVH_5p15.2a	HERV	HERVH	prototype	chr5	12490212	12494480	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-679P	ENSG00000212305	192708	AC106771.1	ENSG00000248783	59410	None	None
ERV316A3_5p15.2a	HERV	ERV316A3	internal	chr5	12567305	12567871	+	noncoding	AC106771.1	lncRNA	ANTISENSE	ENSG00000248783	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_5p15.2b	HERV	HERVH	oneside	chr5	12663608	12668330	-	noncoding	LINC01194	lncRNA	ANTISENSE	ENSG00000248131	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5p15.2b	HERV	ERV316A3	internal	chr5	12781643	12782908	-	noncoding	LINC01194	lncRNA	ANTISENSE	ENSG00000248131	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5p15.2c	HERV	HERVL	internal	chr5	12904475	12905220	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01194	ENSG00000248131	100112	LINC02220	ENSG00000248457	8848	None	None
HERVL_5p15.2d	HERV	HERVL	oneside	chr5	12915818	12921395	-	noncoding	LINC02220	lncRNA	SENSE	ENSG00000248457	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_5p15.2	HERV	HERVL18	oneside	chr5	12934817	12938306	+	noncoding	LINC02220	lncRNA	ANTISENSE	ENSG00000248457	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5p15.2e	HERV	ERVLE	internal	chr5	12970915	12971708	+	noncoding	LINC02220	lncRNA	ANTISENSE	ENSG00000248457	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5p15.2e	HERV	HERVL	oneside	chr5	13147650	13149920	-	coding	AC016553.1	lncRNA	ANTISENSE	ENSG00000248145	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5p15.2f	HERV	HERVL	prototype	chr5	13195693	13201914	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC016553.1	ENSG00000248145	5016	RPS23P5	ENSG00000242608	48321	None	None
ERVLB4_5p15.2a	HERV	ERVLB4	internal	chr5	13232104	13232861	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS23P5	ENSG00000242608	17374	AC016553.1	ENSG00000248145	41427	None	None
ERV316A3_5p15.2c	HERV	ERV316A3	oneside	chr5	13237989	13239596	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS23P5	ENSG00000242608	10639	AC016553.1	ENSG00000248145	47312	None	None
ERV316A3_5p15.2d	HERV	ERV316A3	oneside	chr5	13413442	13416394	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NENFP3	ENSG00000248462	137260	RPS23P5	ENSG00000242608	162780	None	None
ERV316A3_5p15.2e	HERV	ERV316A3	oneside	chr5	13422785	13424300	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NENFP3	ENSG00000248462	129354	RPS23P5	ENSG00000242608	172123	None	None
ERV316A3_5p15.2f	HERV	ERV316A3	oneside	chr5	13468906	13469948	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS23P5	ENSG00000242608	218244	NENFP3	ENSG00000248462	83706	None	None
ERVLB4_5p15.2b	HERV	ERVLB4	internal	chr5	14660212	14663052	-	noncoding	AC010491.1	lncRNA	SENSE	ENSG00000261360	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5p15.1a	HERV	ERVLE	unknown	chr5	15023066	15024376	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016651.1	ENSG00000202269	86410	AC016575.2	ENSG00000286441	30105	None	None
HERVL_5p15.1a	HERV	HERVL	prototype	chr5	15058114	15064463	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016575.2	ENSG00000286441	65153	AC016651.1	ENSG00000202269	46323	None	None
MER41_5p15.1	HERV	MER41	oneside	chr5	15196659	15202471	-	noncoding	LINC02149	lncRNA	SENSE	ENSG00000249332	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5p15.1a	HERV	ERV316A3	oneside	chr5	15220672	15222854	-	noncoding	LINC02149	lncRNA	SENSE	ENSG00000249332	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5p15.1b	HERV	ERV316A3	internal	chr5	15303708	15304316	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02149	ENSG00000249332	37167	MARK2P5	ENSG00000248834	79904	None	None
ERVLE_5p15.1b	HERV	ERVLE	internal	chr5	15312668	15313975	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02149	ENSG00000249332	46127	MARK2P5	ENSG00000248834	70245	None	None
ERVLE_5p15.1c	HERV	ERVLE	internal	chr5	15317276	15320290	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02149	ENSG00000249332	50735	MARK2P5	ENSG00000248834	63930	None	None
HERVL40_5p15.1a	HERV	HERVL40	unknown	chr5	15337517	15340872	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02149	ENSG00000249332	70976	MARK2P5	ENSG00000248834	43348	None	None
HERVH_5p15.1	HERV	HERVH	prototype	chr5	16419969	16425426	+	noncoding	LINC02150	lncRNA	ANTISENSE	ENSG00000248150	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5p15.1c	HERV	ERV316A3	internal	chr5	16641930	16642770	-	noncoding	AC024588.1	lncRNA	ANTISENSE	ENSG00000246214	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_5p15.1	HERV	MER4B	internal	chr5	17061637	17067054	+	coding	BASP1	protein_coding	SENSE	ENSG00000176788	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:17063164-17063167,chr5:17063223-17063232
ERV316A3_5p15.1d	HERV	ERV316A3	oneside	chr5	18082406	18085783	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL36AP21	ENSG00000240785	32534	AC091857.1	ENSG00000212278	150340	None	None
ERV316A3_5p15.1e	HERV	ERV316A3	internal	chr5	18085818	18086746	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL36AP21	ENSG00000240785	35946	AC091857.1	ENSG00000212278	149377	None	None
PABLA_5p15.1	HERV	PABLA	internal	chr5	18199317	18202037	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL36AP21	ENSG00000240785	149445	AC091857.1	ENSG00000212278	34086	None	None
HERVL_5p15.1c	HERV	HERVL	opposite*	chr5	18274724	18277386	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091857.1	ENSG00000212278	38528	RN7SL58P	ENSG00000241552	269926	None	None
HERVL_5p15.1b	HERV	HERVL	oneside	chr5	18294466	18297248	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL58P	ENSG00000241552	250064	AC091857.1	ENSG00000212278	58270	None	None
ERVLB4_5p15.1	HERV	ERVLB4	oneside	chr5	18351093	18354624	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091857.1	ENSG00000212278	114897	RN7SL58P	ENSG00000241552	192688	None	None
HERVL40_5p15.1b	HERV	HERVL40	internal	chr5	18391469	18395845	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL58P	ENSG00000241552	151467	AC091857.1	ENSG00000212278	155273	None	None
ERV316A3_5p14.3a	HERV	ERV316A3	internal	chr5	18516847	18517981	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL58P	ENSG00000241552	29331	AC091857.1	ENSG00000212278	280651	None	None
ERV316A3_5p14.3b	HERV	ERV316A3	internal	chr5	18518069	18518488	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL58P	ENSG00000241552	28824	AC091857.1	ENSG00000212278	281873	None	None
ERV316A3_5p14.3c	HERV	ERV316A3	oneside	chr5	18519474	18521830	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL58P	ENSG00000241552	25482	AC091857.1	ENSG00000212278	283278	None	None
HERVH_5p14.3c	HERV	HERVH	tandem*	chr5	18535211	18544018	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091857.1	ENSG00000212278	299015	RN7SL58P	ENSG00000241552	3294	None	None
ERVLB4_5p14.3a	HERV	ERVLB4	internal	chr5	18576469	18581943	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02100	ENSG00000248693	122490	RN7SL58P	ENSG00000241552	28864	None	None
ERV316A3_5p14.3d	HERV	ERV316A3	prototype	chr5	18595846	18602210	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL58P	ENSG00000241552	48241	LINC02100	ENSG00000248693	102223	None	None
HERVH_5p14.3a	HERV	HERVH	prototype	chr5	18668843	18674598	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02100	ENSG00000248693	29835	RN7SL58P	ENSG00000241552	121238	None	None
HERVW_5p14.3	HERV	HERVW	internal	chr5	18742472	18746014	-	noncoding	LINC02100	lncRNA	SENSE	ENSG00000248693	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_5p14.3a	HERV	HERVL	internal	chr5	18746584	18751737	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02100	ENSG00000248693	411	UBE2V1P12	ENSG00000249191	134885	None	None
HML5_5p14.3	HERV	HML5	oneside	chr5	18782392	18785922	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2V1P12	ENSG00000249191	100700	LINC02100	ENSG00000248693	36219	None	None
HERVL18_5p14.3	HERV	HERVL18	oneside	chr5	18792249	18794461	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02100	ENSG00000248693	46076	UBE2V1P12	ENSG00000249191	92161	None	None
ERV316A3_5p14.3e	HERV	ERV316A3	oneside	chr5	19001542	19004680	-	noncoding	AC106744.1	lncRNA	SENSE	ENSG00000249174	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_5p14.3a	HERV	HERV9	oneside	chr5	19302879	19307739	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDH18	ENSG00000145526	163557	HSPD1P15	ENSG00000249557	68392	None	None
HML3_5p14.3	HERV	HML3	prototype	chr5	19702712	19708946	+	noncoding	CDH18	protein_coding	ANTISENSE	ENSG00000145526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5p14.3b	HERV	HERVL	oneside	chr5	19755387	19761567	-	noncoding	CDH18	protein_coding	SENSE	ENSG00000145526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5p14.3c	HERV	HERVL	oneside	chr5	20341120	20343479	+	noncoding	CDH18,CDH18-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000145526,ENSG00000249854	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5p14.3a	HERV	ERVLE	internal	chr5	20564697	20566277	-	noncoding	CDH18	protein_coding	SENSE	ENSG00000145526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5p14.3b	HERV	ERVLB4	internal	chr5	20674777	20677546	-	noncoding	LINC02241	lncRNA	ANTISENSE	ENSG00000251629	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5p14.3d	HERV	HERVL	oneside	chr5	20820918	20825424	-	noncoding	LINC02241	lncRNA	ANTISENSE	ENSG00000251629	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5p14.3f	HERV	ERV316A3	oneside	chr5	21103390	21105567	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC140168.1	ENSG00000286751	70545	AC140172.1	ENSG00000248286	91153	None	None
MER4_5p14.3a	HERV	MER4	internal	chr5	21105639	21107410	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC140172.1	ENSG00000248286	89310	AC140168.1	ENSG00000286751	72794	None	None
MER4_5p14.3b	HERV	MER4	oneside	chr5	21113479	21117460	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC140172.1	ENSG00000248286	79260	AC140168.1	ENSG00000286751	80634	None	None
HML6_5p14.3	HERV	HML6	oneside	chr5	21282470	21284416	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093274.1	ENSG00000249359	39457	AC140172.1	ENSG00000248286	85610	None	None
PRIMA4_5p14.3	HERV	PRIMA4	internal	chr5	21618528	21619560	+	noncoding	AC091946.1	lncRNA	SENSE	ENSG00000253766	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_5p14.3	HERV	MER4B	internal	chr5	21619579	21624564	+	noncoding	AC091946.1	lncRNA	SENSE	ENSG00000253766	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_5p14.3e	HERV	HERVL	oneside	chr5	21859468	21860986	+	noncoding	CDH12	protein_coding	ANTISENSE	ENSG00000154162	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_5p14.3a	HERV	ERVL	oneside	chr5	21868916	21870425	+	noncoding	CDH12	protein_coding	ANTISENSE	ENSG00000154162	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5p14.3c	HERV	ERVLB4	prototype	chr5	22063622	22070684	+	noncoding	CDH12	protein_coding	ANTISENSE	ENSG00000154162	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_5p14.3b	HERV	HERVH	oneside	chr5	22094702	22100139	+	noncoding	CDH12	protein_coding	ANTISENSE	ENSG00000154162	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5p14.3d	HERV	ERVLB4	oneside	chr5	22526289	22529721	-	noncoding	CDH12	protein_coding	SENSE	ENSG00000154162	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5p14.3g	HERV	ERV316A3	oneside	chr5	22879007	22881020	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDH12	ENSG00000154162	25663	AC010445.1	ENSG00000249404	132028	None	None
HERV9_5p14.3b	HERV	HERV9	oneside	chr5	22929974	22935380	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDH12	ENSG00000154162	76630	AC010445.1	ENSG00000249404	77668	None	None
ERVLE_5p14.3b	HERV	ERVLE	oneside	chr5	22945714	22947090	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDH12	ENSG00000154162	92370	AC010445.1	ENSG00000249404	65958	None	None
ERV316A3_5p14.3h	HERV	ERV316A3	internal	chr5	23025611	23027969	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010460.3	ENSG00000250319	234190	AC010445.1	ENSG00000249404	11084	None	None
ERV316A3_5p14.3i	HERV	ERV316A3	internal	chr5	23074594	23077216	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010460.3	ENSG00000250319	184943	AC010445.1	ENSG00000249404	60067	None	None
ERV316A3_5p14.3j	HERV	ERV316A3	oneside	chr5	23084718	23089581	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010460.3	ENSG00000250319	172578	AC010445.1	ENSG00000249404	70191	None	None
ERVL_5p14.3b	HERV	ERVL	oneside	chr5	23098611	23100255	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010460.3	ENSG00000250319	161904	AC010445.1	ENSG00000249404	84084	None	None
ERVLB4_5p14.3e	HERV	ERVLB4	internal	chr5	23100254	23103203	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010460.3	ENSG00000250319	158956	AC010445.1	ENSG00000249404	85727	None	None
HERVL40_5p14.3	HERV	HERVL40	prototype	chr5	23216957	23220893	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010445.1	ENSG00000249404	202430	AC010460.3	ENSG00000250319	41266	None	None
ERVLB4_5p14.3f	HERV	ERVLB4	internal	chr5	23225024	23227740	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010445.1	ENSG00000249404	210497	AC010460.3	ENSG00000250319	34419	None	None
ERV316A3_5p14.3k	HERV	ERV316A3	prototype	chr5	23253038	23258967	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010445.1	ENSG00000249404	238511	AC010460.3	ENSG00000250319	3192	None	None
HERVL18_5p14.2	HERV	HERVL18	oneside	chr5	23422658	23425618	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010460.2	ENSG00000249289	92766	PRDM9	ENSG00000164256	17968	None	None
ERV316A3_5p14.2a	HERV	ERV316A3	oneside	chr5	23439026	23441097	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRDM9	ENSG00000164256	2489	AC010460.2	ENSG00000249289	109134	None	None
HML1_5p14.2a	HERV	HML1	oneside	chr5	23687166	23690734	+	noncoding	AC108103.1	processed_pseudogene	SENSE	ENSG00000249607	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:23687428-23687432
ERV316A3_5p14.2b	HERV	ERV316A3	oneside	chr5	23759825	23763489	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108103.1	ENSG00000249607	70439	C5orf17	ENSG00000248874	187859	None	None
ERVLE_5p14.2a	HERV	ERVLE	internal	chr5	23776225	23776814	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C5orf17	ENSG00000248874	174534	AC108103.1	ENSG00000249607	86839	None	None
HERVL_5p14.2	HERV	HERVL	oneside	chr5	23804138	23807835	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108103.1	ENSG00000249607	114752	C5orf17	ENSG00000248874	143513	None	None
ERVLE_5p14.2b	HERV	ERVLE	oneside	chr5	23828565	23830332	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C5orf17	ENSG00000248874	121016	AC108103.1	ENSG00000249607	139179	None	None
ERVLE_5p14.2c	HERV	ERVLE	internal	chr5	23837232	23838544	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C5orf17	ENSG00000248874	112804	AC108103.1	ENSG00000249607	147846	None	None
MER61_5p14.2	HERV	MER61	oneside	chr5	23863893	23867155	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108103.1	ENSG00000249607	174507	C5orf17	ENSG00000248874	84193	None	None
ERVLB4_5p14.2a	HERV	ERVLB4	oneside	chr5	24018181	24020095	-	noncoding	C5orf17	lncRNA	ANTISENSE	ENSG00000248874	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:24018191-24018320	None
ERVLE_5p14.2d	HERV	ERVLE	internal	chr5	24048168	24049120	+	noncoding	C5orf17	lncRNA	SENSE	ENSG00000248874	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5p14.2e	HERV	ERVLE	internal	chr5	24058326	24059658	+	noncoding	C5orf17	lncRNA	SENSE	ENSG00000248874	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5p14.2b	HERV	ERVLB4	oneside	chr5	24081552	24082377	-	noncoding	C5orf17	lncRNA	ANTISENSE	ENSG00000248874	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5p14.2c	HERV	ERVLB4	internal	chr5	24082608	24084077	+	noncoding	C5orf17	lncRNA	SENSE	ENSG00000248874	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:24083315-24083320
HML1_5p14.2b	HERV	HML1	prototype	chr5	24308072	24313343	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010387.1	ENSG00000250694	38966	AC114930.1	ENSG00000286134	36209	None	chr5:24310697-24310703
ERVLE_5p14.2f	HERV	ERVLE	oneside	chr5	24333538	24334602	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010387.1	ENSG00000250694	17707	AC114930.1	ENSG00000286134	61675	None	None
HERV9_5p14.2	HERV	HERV9	oneside	chr5	24387043	24391797	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010387.1	ENSG00000250694	33600	AC010387.2	ENSG00000277455	57554	None	None
HARLEQUIN_5p14.2	HERV	HARLEQUIN	prototype	chr5	24391798	24398199	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010387.2	ENSG00000277455	51152	AC010387.1	ENSG00000250694	38355	None	chr5:24397541-24397569
ERV316A3_5p14.2c	HERV	ERV316A3	oneside	chr5	24427327	24428685	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010387.2	ENSG00000277455	20666	AC010387.1	ENSG00000250694	73884	None	None
HML6_5p14.1	HERV	HML6	prototype	chr5	24649664	24654720	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDH10	ENSG00000040731	4686	AC091893.2	ENSG00000286454	74659	None	None
HML1_5p14.1	HERV	HML1	prototype	chr5	24747409	24751712	-	noncoding	AC091893.1	processed_pseudogene	SENSE	ENSG00000250099	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5p14.1a	HERV	ERVLB4	prototype	chr5	24802991	24806045	+	noncoding	AC106821.4	lncRNA	ANTISENSE	ENSG00000286238	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5p14.1a	HERV	ERVLE	internal	chr5	24890439	24892089	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC106821.3	ENSG00000250524	4978	AC106821.1	ENSG00000199911	18505	None	None
ERVLE_5p14.1b	HERV	ERVLE	internal	chr5	24895047	24897965	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC106821.3	ENSG00000250524	9586	AC106821.1	ENSG00000199911	12629	None	None
PRIMA4_5p14.1	HERV	PRIMA4	internal	chr5	25010097	25019988	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02228	ENSG00000251273	67462	AC106821.1	ENSG00000199911	99402	None	None
ERV316A3_5p14.1a	HERV	ERV316A3	internal	chr5	25025977	25027317	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02228	ENSG00000251273	60133	AC106821.1	ENSG00000199911	115282	None	None
ERV316A3_5p14.1b	HERV	ERV316A3	prototype	chr5	25094323	25097831	-	noncoding	LINC02228	lncRNA	SENSE	ENSG00000251273	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5p14.1c	HERV	ERVLE	internal	chr5	25152578	25155900	+	noncoding	LINC02228	lncRNA	ANTISENSE	ENSG00000251273	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_5p14.1a	HERV	MER4	internal	chr5	25157105	25159694	-	noncoding	LINC02228	lncRNA	SENSE	ENSG00000251273	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_5p14.1a	HERV	MER4B	internal	chr5	25159991	25161597	-	noncoding	LINC02228	lncRNA	SENSE	ENSG00000251273	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_5p14.1b	HERV	MER4	oneside	chr5	25161615	25163795	-	noncoding	LINC02228	lncRNA	SENSE	ENSG00000251273	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:25162524-25162528,chr5:25162544-25162553
ERVLE_5p14.1d	HERV	ERVLE	internal	chr5	25205944	25206576	+	noncoding	LINC02211	lncRNA	SENSE	ENSG00000245662	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5p14.1c	HERV	ERV316A3	oneside	chr5	25223289	25224739	+	noncoding	LINC02211,AC099499.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000245662,ENSG00000251654	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:25224573-25224653	None
ERVLB4_5p14.1b	HERV	ERVLB4	internal	chr5	25264597	25265272	+	noncoding	LINC02211,AC099499.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000245662,ENSG00000251654	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5p14.1a	HERV	HERVL	oneside	chr5	25401994	25403720	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC106754.2	ENSG00000279671	51921	AC022140.1	ENSG00000248605	1013	None	None
ERVLE_5p14.1e	HERV	ERVLE	internal	chr5	25471097	25472969	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022140.1	ENSG00000248605	25172	RNU6-374P	ENSG00000201016	228248	None	None
PABLA_5p14.1	HERV	PABLA	internal	chr5	25567694	25568982	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022140.1	ENSG00000248605	121769	RNU6-374P	ENSG00000201016	132235	None	None
MER4B_5p14.1b	HERV	MER4B	oneside	chr5	25569603	25576106	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022140.1	ENSG00000248605	123678	RNU6-374P	ENSG00000201016	125111	None	None
ERVLE_5p14.1f	HERV	ERVLE	internal	chr5	25598654	25600138	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-374P	ENSG00000201016	101079	AC022140.1	ENSG00000248605	152729	None	None
MER101_5p14.1a	HERV	MER101	internal	chr5	25754459	25756691	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MSNP1	ENSG00000251593	152812	AC022418.1	ENSG00000279869	37744	None	None
LTR57_5p14.1	HERV	LTR57	prototype	chr5	25793696	25799696	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022418.1	ENSG00000279869	76981	MSNP1	ENSG00000251593	109807	None	None
ERVLE_5p14.1g	HERV	ERVLE	internal	chr5	25820167	25821669	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022418.1	ENSG00000279869	103452	MSNP1	ENSG00000251593	87834	None	None
MER101_5p14.1b	HERV	MER101	internal	chr5	25853915	25855389	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022418.1	ENSG00000279869	137200	MSNP1	ENSG00000251593	54114	None	None
MER101_5p14.1c	HERV	MER101	internal	chr5	25855870	25858894	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC022418.1	ENSG00000279869	139155	MSNP1	ENSG00000251593	50609	None	None
MER101_5p14.1d	HERV	MER101	oneside	chr5	25859219	25863182	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022418.1	ENSG00000279869	142504	MSNP1	ENSG00000251593	46321	None	None
HERVL_5p14.1b	HERV	HERVL	prototype	chr5	26103881	26107744	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025475.1	ENSG00000249099	274775	RNU4-43P	ENSG00000222560	90856	None	None
HERVL_5p14.1c	HERV	HERVL	prototype	chr5	26398325	26405152	-	noncoding	AC025475.1	lncRNA	SENSE	ENSG00000249099	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5p14.1h	HERV	ERVLE	internal	chr5	26423333	26428119	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025475.2	ENSG00000286204	45386	AC025475.1	ENSG00000249099	23514	None	None
HERVL74_5p14.1	HERV	HERVL74	oneside	chr5	26430056	26431437	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025475.1	ENSG00000249099	30237	AC025475.2	ENSG00000286204	42068	None	None
MER41_5p14.1	HERV	MER41	internal	chr5	26488052	26489966	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025475.2	ENSG00000286204	3341	AC113347.1	ENSG00000230571	179380	None	None
ERVLE_5p14.1i	HERV	ERVLE	internal	chr5	26543974	26546393	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025475.2	ENSG00000286204	59263	AC113347.1	ENSG00000230571	122953	None	None
HERVL_5p14.1d	HERV	HERVL	prototype	chr5	26560812	26564097	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025475.2	ENSG00000286204	76101	AC113347.1	ENSG00000230571	105249	None	None
MER34B_5p14.1	HERV	MER34B	internal	chr5	26643998	26644675	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025475.2	ENSG00000286204	159287	AC113347.1	ENSG00000230571	24671	None	None
ERVLE_5p14.1j	HERV	ERVLE	internal	chr5	26679552	26682260	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113347.3	ENSG00000250703	9071	AC113347.4	ENSG00000251033	29291	None	None
HERVL_5p14.1e	HERV	HERVL	prototype	chr5	26768814	26775626	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113347.4	ENSG00000251033	18817	CDH9	ENSG00000113100	104971	None	None
ERVLE_5p14.1k	HERV	ERVLE	internal	chr5	27058270	27060143	+	noncoding	CDH9	protein_coding	ANTISENSE	ENSG00000113100	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5p14.1d	HERV	ERV316A3	oneside	chr5	27062218	27064330	+	noncoding	CDH9	protein_coding	ANTISENSE	ENSG00000113100	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_5p14.1e	HERV	MER101	internal	chr5	27153791	27155981	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDH9	ENSG00000113100	32641	PURPL	ENSG00000250337	61733	None	None
ERVLB4_5p14.1c	HERV	ERVLB4	internal	chr5	27274559	27275782	-	noncoding	PURPL	lncRNA	ANTISENSE	ENSG00000250337	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5p14.1l	HERV	ERVLE	internal	chr5	27307485	27308052	+	noncoding	PURPL	lncRNA	SENSE	ENSG00000250337	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5p14.1d	HERV	ERVLB4	oneside	chr5	27308045	27311243	+	noncoding	PURPL	lncRNA	SENSE	ENSG00000250337	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5p14.1e	HERV	ERVLB4	internal	chr5	27418462	27419087	-	noncoding	PURPL,AC113355.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000250337,ENSG00000248490	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_5p14.1	HERV	MER61	prototype	chr5	27472074	27477973	+	noncoding	PURPL	lncRNA	SENSE	ENSG00000250337	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:27472264-27472311,chr5:27472369-27472380,chr5:27472399-27472410,chr5:27472445-27472456,chr5:27472602-27472633,chr5:27472867-27472874
ERV316A3_5p14.1e	HERV	ERV316A3	internal	chr5	27491286	27492043	-	noncoding	PURPL	lncRNA	ANTISENSE	ENSG00000250337	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5p14.1f	HERV	HERVL	prototype	chr5	27514122	27520676	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093300.1	ENSG00000250079	692683	PURPL	ENSG00000250337	17128	None	None
ERVLE_5p14.1m	HERV	ERVLE	internal	chr5	27579629	27581261	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093300.1	ENSG00000250079	632098	PURPL	ENSG00000250337	82635	None	None
HERVL_5p14.1g	HERV	HERVL	oneside	chr5	27630581	27636850	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093300.1	ENSG00000250079	576509	PURPL	ENSG00000250337	133587	None	None
MER4_5p14.1c	HERV	MER4	oneside	chr5	27858711	27860856	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093300.1	ENSG00000250079	352503	PURPL	ENSG00000250337	361717	None	None
HERVL_5p14.1h	HERV	HERVL	prototype	chr5	27897474	27904021	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PURPL	ENSG00000250337	400480	AC093300.1	ENSG00000250079	309338	None	None
ERVLE_5p14.1n	HERV	ERVLE	internal	chr5	28008057	28009387	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093300.1	ENSG00000250079	203972	PURPL	ENSG00000250337	511063	None	None
HUERSP3B_5p14.1a	HERV	HUERSP3B	oneside	chr5	28011639	28013516	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PURPL	ENSG00000250337	514645	AC093300.1	ENSG00000250079	199843	None	None
HUERSP3B_5p14.1b	HERV	HUERSP3B	oneside	chr5	28013557	28015406	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PURPL	ENSG00000250337	516563	AC093300.1	ENSG00000250079	197953	None	None
HERVH_5p14.1	HERV	HERVH	oneside	chr5	28047131	28052299	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PURPL	ENSG00000250337	550137	AC093300.1	ENSG00000250079	161060	chr5:28048187-28048449	None
HERVL_5p14.1i	HERV	HERVL	oneside	chr5	28122396	28124716	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093300.1	ENSG00000250079	88643	PURPL	ENSG00000250337	625402	None	None
ERVLB4_5p14.1f	HERV	ERVLB4	prototype	chr5	28169887	28173178	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093300.1	ENSG00000250079	40181	PURPL	ENSG00000250337	672893	None	None
ERVLB4_5p14.1g	HERV	ERVLB4	internal	chr5	28248853	28249763	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093300.1	ENSG00000250079	34294	LINC02103	ENSG00000249785	36201	None	None
ERVLE_5p14.1o	HERV	ERVLE	internal	chr5	28287750	28288628	+	noncoding	LINC02103	lncRNA	ANTISENSE	ENSG00000249785	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5p14.1p	HERV	ERVLE	oneside	chr5	28316106	28319929	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008825.1	ENSG00000250453	228206	LINC02103	ENSG00000249785	28299	None	None
MER101_5p14.1f	HERV	MER101	internal	chr5	28419636	28421396	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008825.1	ENSG00000250453	126739	LINC02103	ENSG00000249785	131829	None	None
HERVL_5p14.1j	HERV	HERVL	oneside	chr5	28445761	28450926	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02103	ENSG00000249785	157954	AC008825.1	ENSG00000250453	97209	None	None
HERVL_5p14.1k	HERV	HERVL	oneside	chr5	28504955	28510804	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008825.1	ENSG00000250453	37331	LINC02103	ENSG00000249785	217148	None	None
ERVLB4_5p14.1h	HERV	ERVLB4	internal	chr5	28591890	28594425	+	noncoding	AC008825.1	lncRNA	ANTISENSE	ENSG00000250453	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_5p14.1c	HERV	MER4B	internal	chr5	28667225	28668348	-	noncoding	AC008825.1	lncRNA	SENSE	ENSG00000250453	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5p14.1i	HERV	ERVLB4	internal	chr5	28847810	28851374	+	noncoding	LINC02109	lncRNA	SENSE	ENSG00000259786	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5p13.3a	HERV	ERVLE	internal	chr5	28921679	28922399	+	noncoding	LINC02109	lncRNA	SENSE	ENSG00000259786	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5p13.3b	HERV	ERVLE	internal	chr5	28960070	28962456	-	noncoding	LINC02109	lncRNA	ANTISENSE	ENSG00000259786	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5p13.3a	HERV	HERVL	prototype	chr5	28971115	28975134	-	noncoding	LINC02109	lncRNA	ANTISENSE	ENSG00000259786	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5p13.3a	HERV	ERVLB4	oneside	chr5	28985893	28987823	-	noncoding	LINC02109	lncRNA	ANTISENSE	ENSG00000259786	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5p13.3b	HERV	ERVLB4	oneside	chr5	29077290	29082742	-	noncoding	LINC02109	lncRNA	ANTISENSE	ENSG00000259786	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5p13.3c	HERV	ERVLE	internal	chr5	29228589	29229558	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC112172.2	ENSG00000286182	10364	LINC02109	ENSG00000259786	11474	None	None
MER41_5p13.3a	HERV	MER41	oneside	chr5	29352622	29355405	+	coding	LINC02064	lncRNA	ANTISENSE	ENSG00000248391	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5p13.3a	HERV	ERV316A3	oneside	chr5	29386995	29388401	+	noncoding	LINC02064	lncRNA	ANTISENSE	ENSG00000248391	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH21_5p13.3	HERV	HERVFH21	prototype	chr5	29389989	29396428	+	noncoding	LINC02064	lncRNA	ANTISENSE	ENSG00000248391	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:29396000-29396015
ERVLE_5p13.3d	HERV	ERVLE	internal	chr5	29502700	29505413	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02064	ENSG00000248391	106605	AC027345.1	ENSG00000276098	10592	None	None
ERVLE_5p13.3e	HERV	ERVLE	oneside	chr5	29559741	29562109	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027345.1	ENSG00000276098	43237	UBL5P1	ENSG00000248418	38567	None	None
ERV316A3_5p13.3b	HERV	ERV316A3	internal	chr5	29786831	29789693	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108082.1	ENSG00000250984	6245	UBL5P1	ENSG00000248418	185963	None	None
ERV316A3_5p13.3c	HERV	ERV316A3	internal	chr5	29790275	29790800	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBL5P1	ENSG00000248418	189407	AC108082.1	ENSG00000250984	5138	None	None
ERVLE_5p13.3f	HERV	ERVLE	internal	chr5	29836266	29840103	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108082.1	ENSG00000250984	39998	AC010374.2	ENSG00000249744	8581	None	None
PRIMA4_5p13.3	HERV	PRIMA4	internal	chr5	29863795	29864991	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010374.2	ENSG00000249744	14577	AC010374.1	ENSG00000233787	16718	None	None
ERVLE_5p13.3g	HERV	ERVLE	internal	chr5	29872684	29875544	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010374.2	ENSG00000249744	23466	AC010374.1	ENSG00000233787	6165	None	None
HUERSP3_5p13.3	HERV	HUERSP3	oneside	chr5	29918420	29923451	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP207	ENSG00000223136	25377	AC010374.1	ENSG00000233787	35475	None	None
ERVLE_5p13.3h	HERV	ERVLE	internal	chr5	29970588	29971374	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018765.1	ENSG00000280305	8295	RN7SKP207	ENSG00000223136	21458	None	None
ERVLB4_5p13.3d	HERV	ERVLB4	insert*	chr5	30205509	30208588	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018765.1	ENSG00000280305	222395	HPRT1P2	ENSG00000250587	39762	None	None
MER61_5p13.3	HERV	MER61	internal	chr5	30237440	30239507	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018765.1	ENSG00000280305	254326	HPRT1P2	ENSG00000250587	8843	None	None
HML2_5p13.3	HERV	HML2	prototype	chr5	30486653	30496098	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099517.1	ENSG00000287176	49079	AC114300.1	ENSG00000250118	120969	None	None
ERV316A3_5p13.3d	HERV	ERV316A3	prototype	chr5	30749381	30756199	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL19P11	ENSG00000241668	297366	AC026433.1	ENSG00000287940	5677	None	None
ERVLE_5p13.3i	HERV	ERVLE	internal	chr5	31241893	31243441	-	noncoding	AC113386.1,CDH6	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000254138,ENSG00000113361	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_5p13.3a	HERV	HML1	oneside	chr5	31393883	31395131	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DROSHA	ENSG00000113360	5366	CDH6	ENSG00000113361	64737	None	None
HERVW_5p13.3	HERV	HERVW	internal	chr5	31395132	31397814	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DROSHA	ENSG00000113360	2683	CDH6	ENSG00000113361	65986	None	None
HML1_5p13.3b	HERV	HML1	oneside	chr5	31397851	31398996	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DROSHA	ENSG00000113360	1501	CDH6	ENSG00000113361	68705	None	None
ERV316A3_5p13.3e	HERV	ERV316A3	oneside	chr5	31500031	31503600	+	noncoding	DROSHA	protein_coding	ANTISENSE	ENSG00000113360	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5p13.3b	HERV	HERVL	prototype	chr5	32287158	32293609	+	coding	MTMR12	protein_coding	ANTISENSE	ENSG00000150712	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_5p13.3b	HERV	MER41	oneside	chr5	32345628	32348538	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTMR12	ENSG00000150712	32641	ZFR	ENSG00000056097	5812	None	None
ERVLE_5p13.3j	HERV	ERVLE	internal	chr5	32451650	32454706	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074134.1	ENSG00000249142	68052	ZFR	ENSG00000056097	6910	None	None
ERVLB4_5p13.3c	HERV	ERVLB4	internal	chr5	32512637	32514294	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZFR	ENSG00000056097	67897	AC074134.1	ENSG00000249142	8464	None	None
ERVL_5p13.3	HERV	ERVL	internal	chr5	32670414	32671410	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPR3	ENSG00000113389	17660	AC008766.1	ENSG00000286741	14392	None	None
ERVLE_5p13.3k	HERV	ERVLE	internal	chr5	32678900	32682314	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPR3	ENSG00000113389	6756	AC008766.1	ENSG00000286741	22878	None	None
ERVLE_5p13.3l	HERV	ERVLE	internal	chr5	33039722	33041554	+	noncoding	AC010343.3	lncRNA	ANTISENSE	ENSG00000250697	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5p13.3m	HERV	ERVLE	internal	chr5	33045136	33046529	+	noncoding	AC010343.3	lncRNA	ANTISENSE	ENSG00000250697	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5p13.2a	HERV	ERVLE	oneside	chr5	33923339	33925183	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RXFP3	ENSG00000182631	11203	ADAMTS12	ENSG00000151388	31320	None	None
HERVW_5p13.2a	HERV	HERVW	internal	chr5	34062180	34063274	-	noncoding	C1QTNF3-AMACR	protein_coding	SENSE	ENSG00000273294	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5p13.2a	HERV	HERVL	oneside	chr5	34378549	34383052	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138853.1	ENSG00000249380	4699	AC025754.2	ENSG00000271874	268405	None	None
MER4_5p13.2b	HERV	MER4	mergeable*	chr5	34411973	34426406	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138853.1	ENSG00000249380	38123	AC025754.2	ENSG00000271874	225051	None	None
MER4_5p13.2a	HERV	MER4	oneside	chr5	34455959	34460957	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025754.2	ENSG00000271874	190500	AC138853.1	ENSG00000249380	82109	None	None
HERVK11D_5p13.2	HERV	HERVK11D	prototype	chr5	34460958	34468537	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC025754.2	ENSG00000271874	182920	AC138853.1	ENSG00000249380	87108	None	None
HERVL_5p13.2b	HERV	HERVL	prototype	chr5	34560551	34562165	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025754.2	ENSG00000271874	89292	AC138853.1	ENSG00000249380	186701	None	None
HML3_5p13.2	HERV	HML3	prototype	chr5	34781776	34787225	-	noncoding	RAI14	protein_coding	ANTISENSE	ENSG00000039560	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_5p13.2	HERV	MER61	prototype	chr5	35717489	35723193	-	noncoding	SPEF2,AC137810.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000152582,ENSG00000248969	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5p13.2b	HERV	ERVLE	internal	chr5	35940127	35942227	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC112204.2	ENSG00000249748	134	UGT3A1	ENSG00000145626	8779	None	None
HUERSP2_5p13.2	HERV	HUERSP2	oneside	chr5	35960408	35963963	-	noncoding	UGT3A1	protein_coding	SENSE	ENSG00000145626	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5p13.2	HERV	ERVLB4	oneside	chr5	35972144	35976364	+	noncoding	UGT3A1	protein_coding	ANTISENSE	ENSG00000145626	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_5p13.2	HERV	PRIMA4	oneside	chr5	35992818	36001700	+	coding	UGT3A1	protein_coding	ANTISENSE	ENSG00000145626	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:36001006-36001043
HML1_5p13.2	HERV	HML1	internal	chr5	36059135	36060241	+	noncoding	UGT3A2	protein_coding	ANTISENSE	ENSG00000168671	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_5p13.2b	HERV	HERVW	prototype	chr5	36328700	36333122	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114277.1	ENSG00000287634	10550	RANBP3L	ENSG00000164188	26586	None	None
ERV316A3_5p13.2	HERV	ERV316A3	internal	chr5	36515383	36516443	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010631.1	ENSG00000242292	72063	RNA5SP181	ENSG00000222178	29943	None	None
ERVLE_5p13.2c	HERV	ERVLE	internal	chr5	36707963	36712659	-	noncoding	AC008957.1	lncRNA	SENSE	ENSG00000250155	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5p13.2d	HERV	ERVLE	internal	chr5	36772741	36777062	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008957.1	ENSG00000250155	47546	AC026741.1	ENSG00000272103	84674	None	None
HML5_5p13.2	HERV	HML5	prototype	chr5	37086386	37094268	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS4XP6	ENSG00000244073	534	CPLANE1	ENSG00000197603	11960	None	None
MER101_5p13.2a	HERV	MER101	internal	chr5	37255710	37257899	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025449.2	ENSG00000286193	3093	AC025449.1	ENSG00000270558	28550	None	None
MER101_5p13.2b	HERV	MER101	internal	chr5	37261655	37263651	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025449.2	ENSG00000286193	9038	AC025449.1	ENSG00000270558	22798	None	None
HERVL_5p13.2c	HERV	HERVL	prototype	chr5	37264509	37271987	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC025449.1	ENSG00000270558	14462	AC025449.2	ENSG00000286193	11892	None	None
HARLEQUIN_5p13.2	HERV	HARLEQUIN	prototype	chr5	37778063	37786157	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GDNF-AS1	ENSG00000248587	25432	WDR70	ENSG00000082068	24628	None	None
HERVL_5p13.2d	HERV	HERVL	oneside	chr5	37793305	37798236	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	WDR70	ENSG00000082068	39870	GDNF-AS1	ENSG00000248587	13353	None	None
ERVLE_5p13.2e	HERV	ERVLE	internal	chr5	38196883	38200966	+	noncoding	AC010338.1	processed_pseudogene	SENSE	ENSG00000276332	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4B_5p13.1a	HERV	MER4B	internal	chr5	38632730	38633763	+	noncoding	LIFR-AS1	lncRNA	SENSE	ENSG00000244968	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5p13.1a	HERV	ERV316A3	prototype	chr5	38645421	38647106	-	noncoding	LIFR-AS1	lncRNA	ANTISENSE	ENSG00000244968	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_5p13.1	HERV	HUERSP3B	oneside	chr5	39653791	39655491	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC11P1	ENSG00000251515	81152	INTS6P1	ENSG00000250492	63493	None	None
ERV316A3_5p13.1b	HERV	ERV316A3	oneside	chr5	39691521	39693328	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	INTS6P1	ENSG00000250492	25656	CCDC11P1	ENSG00000251515	118882	None	None
ERV316A3_5p13.1g	HERV	ERV316A3	opposite*	chr5	39805462	39809036	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	INTS6P1	ENSG00000250492	83949	GCSHP1	ENSG00000248651	79540	None	None
HERVL_5p13.1a	HERV	HERVL	prototype	chr5	39971679	39976803	-	noncoding	LINC00603	lncRNA	ANTISENSE	ENSG00000250048	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_5p13.1	HERV	MER4	oneside	chr5	40086776	40093232	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT18P56	ENSG00000249668	19576	LINC00604	ENSG00000250585	146935	None	None
HERVK11_5p13.1	HERV	HERVK11	prototype	chr5	40102909	40112770	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT18P56	ENSG00000249668	35709	LINC00604	ENSG00000250585	127397	None	None
MER4B_5p13.1b	HERV	MER4B	oneside	chr5	40116395	40125081	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00604	ENSG00000250585	115086	KRT18P56	ENSG00000249668	49195	None	None
MER4B_5p13.1c	HERV	MER4B	oneside	chr5	40131522	40133551	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00604	ENSG00000250585	106616	KRT18P56	ENSG00000249668	64322	None	None
ERVLB4_5p13.1	HERV	ERVLB4	oneside	chr5	40363095	40366597	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108105.1	ENSG00000287597	50190	AC093277.1	ENSG00000283286	48540	chr5:40365825-40365983	None
ERVLE_5p13.1	HERV	ERVLE	internal	chr5	40515547	40516801	+	noncoding	TTC33	protein_coding	ANTISENSE	ENSG00000113638	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5p13.1c	HERV	ERV316A3	oneside	chr5	41111329	41114252	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MROH2B	ENSG00000171495	39987	C6	ENSG00000039537	27982	None	None
HML6_5p13.1	HERV	HML6	prototype	chr5	41473985	41476042	-	noncoding	PLCXD3	protein_coding	SENSE	ENSG00000182836	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5p13.1b	HERV	HERVL	prototype	chr5	41659381	41665513	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OXCT1	ENSG00000083720	64552	AC008817.1	ENSG00000251478	71594	None	None
MER4B_5p13.1d	HERV	MER4B	oneside	chr5	41880573	41888689	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC034222.1	ENSG00000240281	6379	AC034222.2	ENSG00000286164	363	None	None
HERVL_5p13.1c	HERV	HERVL	prototype	chr5	41993581	41999956	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108099.1	ENSG00000260786	188310	MTHFD2P6	ENSG00000249266	25215	None	None
ERV316A3_5p13.1d	HERV	ERV316A3	oneside	chr5	42121529	42124549	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108099.1	ENSG00000260786	63717	MTHFD2P6	ENSG00000249266	153163	None	None
ERV316A3_5p13.1e	HERV	ERV316A3	oneside	chr5	42124929	42126734	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108099.1	ENSG00000260786	61532	MTHFD2P6	ENSG00000249266	156563	None	None
ERV316A3_5p13.1f	HERV	ERV316A3	oneside	chr5	42381821	42384670	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GHR	ENSG00000112964	38769	AC108099.1	ENSG00000260786	190298	None	None
ERVLE_5p12a	HERV	ERVLE	internal	chr5	42727042	42727840	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113368.1	ENSG00000270513	1298	GHR	ENSG00000112964	5164	None	None
ERV316A3_5p12a	HERV	ERV316A3	prototype	chr5	42790505	42792913	-	noncoding	CCDC152	protein_coding	ANTISENSE	ENSG00000198865	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_5p12a	HERV	HARLEQUIN	prototype	chr5	42813176	42819811	+	coding	SELENOP,AC008945.2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000250722,ENSG00000286271	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:42813822-42813836
LTR57_5p12a	HERV	LTR57	internal	chr5	42920403	42921689	-	noncoding	AC008945.2	lncRNA	ANTISENSE	ENSG00000286271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_5p12a	HERV	MER4	internal	chr5	42964673	42966094	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008945.2	ENSG00000286271	40138	PRELID3BP7	ENSG00000250711	6530	None	None
LTR57_5p12b	HERV	LTR57	internal	chr5	42975428	42977018	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008875.3	ENSG00000287263	6618	PRELID3BP7	ENSG00000250711	2336	None	None
MER4_5p12b	HERV	MER4	oneside	chr5	42986670	42989161	-	noncoding	AC008875.3	lncRNA	SENSE	ENSG00000287263	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_5p12c	HERV	MER4	internal	chr5	42996067	42997591	+	noncoding	AC008875.2	lncRNA	SENSE	ENSG00000286656	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_5p12d	HERV	MER4	internal	chr5	43020758	43026332	+	noncoding	AC025171.1,AC025171.3	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000177738,ENSG00000251131	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH48_5p12	HERV	HERVH48	oneside	chr5	43072721	43075673	-	noncoding	ZNF131	protein_coding	ANTISENSE	ENSG00000172262	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_5p12	HERV	HERVL40	prototype	chr5	43149894	43159343	-	noncoding	ZNF131	protein_coding	ANTISENSE	ENSG00000172262	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5p12b	HERV	ERVLE	internal	chr5	43281671	43286380	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGCS1	ENSG00000112972	1090	NIM1K	ENSG00000177453	821	None	None
HERVIP10F_5p12a	HERV	HERVIP10F	oneside	chr5	43315211	43319940	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114947.1	ENSG00000188850	16224	HMGCS1	ENSG00000112972	1699	None	None
HERVIP10F_5p12b	HERV	HERVIP10F	internal	chr5	43319973	43320822	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114947.1	ENSG00000188850	15342	HMGCS1	ENSG00000112972	6461	None	None
HERVH_5p12a	HERV	HERVH	oneside	chr5	43320823	43322830	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114947.1	ENSG00000188850	13334	HMGCS1	ENSG00000112972	7311	None	None
HERVH_5p12b	HERV	HERVH	oneside	chr5	43329037	43333455	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114947.1	ENSG00000188850	2709	HMGCS1	ENSG00000112972	15525	None	None
HERVIP10F_5p12c	HERV	HERVIP10F	oneside	chr5	43333456	43336643	-	noncoding	AC114947.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000188850	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_5p12	HERV	PRIMA41	prototype	chr5	43564608	43571507	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PAIP1	ENSG00000172239	6850	NNT-AS1	ENSG00000248092	87	None	None
HERVH_5p12c	HERV	HERVH	oneside	chr5	43786495	43791592	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NNT	ENSG00000112992	79090	AC104119.1	ENSG00000249276	82775	None	None
ERVLB4_5p12	HERV	ERVLB4	internal	chr5	43982348	43987405	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-381P	ENSG00000212561	79219	AC104119.1	ENSG00000249276	95720	None	None
ERV316A3_5p12b	HERV	ERV316A3	prototype	chr5	44004189	44013175	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-381P	ENSG00000212561	53449	AC104119.1	ENSG00000249276	117561	None	None
ERVLE_5p12c	HERV	ERVLE	internal	chr5	44050957	44053382	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-381P	ENSG00000212561	13242	AC104119.1	ENSG00000249276	164329	None	None
HERVW_5p12	HERV	HERVW	prototype	chr5	44111088	44115077	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-381P	ENSG00000212561	44357	FGF10	ENSG00000070193	185170	None	None
HERVH_5p12d	HERV	HERVH	oneside	chr5	44115078	44120093	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FGF10	ENSG00000070193	180154	RNU6-381P	ENSG00000212561	48347	None	None
MER61_5p12a	HERV	MER61	prototype	chr5	44151702	44159634	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-381P	ENSG00000212561	84971	FGF10	ENSG00000070193	140613	None	None
ERV316A3_5p12c	HERV	ERV316A3	oneside	chr5	44187358	44192012	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FGF10	ENSG00000070193	108235	RNU6-381P	ENSG00000212561	120627	None	None
MER61_5p12b	HERV	MER61	prototype	chr5	44453725	44458866	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02224	ENSG00000249203	36233	FGF10-AS1	ENSG00000248464	39736	None	None
ERVLE_5p12d	HERV	ERVLE	internal	chr5	44720506	44721907	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPS30-DT	ENSG00000251141	20513	RN7SL383P	ENSG00000263556	4020	None	None
MER41_5p12	HERV	MER41	oneside	chr5	44785133	44788577	-	noncoding	MRPS30-DT	lncRNA	SENSE	ENSG00000251141	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_5p12a	HERV	HML3	prototype	chr5	44788578	44793529	+	noncoding	MRPS30-DT	lncRNA	ANTISENSE	ENSG00000251141	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_5p12b	HERV	HML3	prototype	chr5	44985920	44990332	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093297.2	ENSG00000272335	157328	AC114954.1	ENSG00000248148	44867	None	None
ERVLE_5p12e	HERV	ERVLE	internal	chr5	45076234	45076988	-	noncoding	AC114954.1	lncRNA	ANTISENSE	ENSG00000248148	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5p12d	HERV	ERV316A3	internal	chr5	45128042	45130548	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC116350.1	ENSG00000287540	95738	AC114954.1	ENSG00000248148	29395	None	None
ERV316A3_5p12e	HERV	ERV316A3	oneside	chr5	45154298	45161107	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC116350.1	ENSG00000287540	65179	AC114954.1	ENSG00000248148	55651	None	None
HARLEQUIN_5p12b	HERV	HARLEQUIN	oneside	chr5	45206107	45208543	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114954.1	ENSG00000248148	107460	AC116350.1	ENSG00000287540	17743	None	None
ERV316A3_5p12f	HERV	ERV316A3	oneside	chr5	45862287	45864352	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HCN1	ENSG00000164588	165789	AC122694.1	ENSG00000250122	25864	None	None
HML2_5p12	HERV	HML2	prototype	chr5	46000057	46009900	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EMB	ENSG00000170571	4386292	AC122694.1	ENSG00000250122	104087	None	None
ERVLE_5q11.1	HERV	ERVLE	internal	chr5	50630668	50634250	+	coding	AC112187.1	processed_pseudogene	SENSE	ENSG00000213956	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q11.1	HERV	ERV316A3	prototype	chr5	51356075	51358262	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026798.1	ENSG00000240627	80341	AC010478.1	ENSG00000259663	14474	None	None
MER101_5q11.2a	HERV	MER101	internal	chr5	51754538	51755246	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022433.1	ENSG00000288035	89490	RNA5SP182	ENSG00000251873	131442	None	None
MER101_5q11.2b	HERV	MER101	oneside	chr5	51758652	51761714	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022433.1	ENSG00000288035	93604	RNA5SP182	ENSG00000251873	124974	None	None
MER41_5q11.2a	HERV	MER41	oneside	chr5	51776476	51779982	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP182	ENSG00000251873	106706	AC022433.1	ENSG00000288035	111428	None	None
ERV316A3_5q11.2a	HERV	ERV316A3	internal	chr5	52285001	52286838	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS17P11	ENSG00000244621	2142	MFSD4BP1	ENSG00000250827	292717	None	None
ERV316A3_5q11.2b	HERV	ERV316A3	unknown	chr5	52287446	52290115	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS17P11	ENSG00000244621	4587	MFSD4BP1	ENSG00000250827	289440	None	None
HML3_5q11.2a	HERV	HML3	prototype	chr5	52304484	52310228	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS17P11	ENSG00000244621	21625	MFSD4BP1	ENSG00000250827	269327	None	None
ERVLB4_5q11.2a	HERV	ERVLB4	oneside	chr5	52962628	52964561	-	noncoding	AC025180.1	lncRNA	SENSE	ENSG00000249899	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q11.2c	HERV	ERV316A3	oneside	chr5	53153414	53157627	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026477.1	ENSG00000213940	48934	AC008966.1	ENSG00000247796	25741	None	chr5:53154756-53154759
HERVH48_5q11.2	HERV	HERVH48	oneside	chr5	53200331	53205964	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008966.1	ENSG00000247796	72658	AC026477.1	ENSG00000213940	597	None	None
MER4B_5q11.2	HERV	MER4B	oneside	chr5	53207227	53213353	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027329.1	ENSG00000285831	84519	AC026477.1	ENSG00000213940	51	None	None
HERV30_5q11.2	HERV	HERV30	internal	chr5	53218680	53224199	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC027329.1	ENSG00000285831	73673	AC026477.1	ENSG00000213940	11504	None	None
ERV316A3_5q11.2d	HERV	ERV316A3	prototype	chr5	53259162	53265410	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027329.1	ENSG00000285831	32462	AC026477.1	ENSG00000213940	51986	None	None
ERV316A3_5q11.2e	HERV	ERV316A3	oneside	chr5	53399286	53400644	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108114.1	ENSG00000240052	12860	AC027329.1	ENSG00000285831	72721	None	None
MER34B_5q11.2	HERV	MER34B	internal	chr5	53638716	53640356	-	noncoding	NDUFS4	protein_coding	ANTISENSE	ENSG00000164258	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q11.2a	HERV	ERVLE	oneside	chr5	54327522	54331132	-	noncoding	LINC01033	lncRNA	ANTISENSE	ENSG00000249069	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_5q11.2b	HERV	MER41	internal	chr5	54345565	54346755	+	noncoding	LINC01033	lncRNA	SENSE	ENSG00000249069	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_5q11.2b	HERV	HML3	prototype	chr5	54498219	54505406	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SNX18	ENSG00000178996	12353	HSPB3	ENSG00000169271	41842	None	None
ERV316A3_5q11.2f	HERV	ERV316A3	prototype	chr5	54698551	54699599	-	noncoding	AC016583.2	lncRNA	ANTISENSE	ENSG00000287367	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q11.2g	HERV	ERV316A3	oneside	chr5	55068803	55071639	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GZMAP1	ENSG00000249454	1376	AC034238.3	ENSG00000248029	2573	None	None
HERV9_5q11.2	HERV	HERV9	prototype	chr5	55613186	55617951	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AK4P2	ENSG00000249410	60632	SLC38A9	ENSG00000177058	7894	None	None
ERV316A3_5q11.2h	HERV	ERV316A3	internal	chr5	55793265	55794016	-	noncoding	DDX4	protein_coding	ANTISENSE	ENSG00000152670	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5q11.2b	HERV	ERVLB4	internal	chr5	56234749	56238003	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ANKRD55	ENSG00000164512	1419	RNA5SP185	ENSG00000212265	22330	None	None
ERV316A3_5q11.2i	HERV	ERV316A3	internal	chr5	56749269	56750819	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C5orf67	ENSG00000225940	143037	AC008940.1	ENSG00000228650	19980	None	None
HERVH_5q11.2	HERV	HERVH	prototype	chr5	57016452	57022454	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC034244.2	ENSG00000248652	59291	AC114973.1	ENSG00000233943	40228	None	None
HERVL40_5q11.2	HERV	HERVL40	oneside	chr5	57223500	57226547	+	noncoding	GPBP1	protein_coding	SENSE	ENSG00000062194	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q11.2b	HERV	ERVLE	internal	chr5	57465630	57469978	-	noncoding	AC025470.2	lncRNA	ANTISENSE	ENSG00000250961	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_5q11.2	HERV	HERVW	oneside	chr5	57520023	57522889	-	noncoding	AC025470.2	lncRNA	ANTISENSE	ENSG00000250961	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q11.2c	HERV	ERVLE	internal	chr5	57562952	57563871	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008780.1	ENSG00000249436	10156	AC025470.2	ENSG00000250961	28448	None	None
ERV316A3_5q11.2j	HERV	ERV316A3	internal	chr5	57641569	57642412	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008780.1	ENSG00000249436	21753	AC008780.2	ENSG00000287709	8266	None	None
ERV316A3_5q11.2k	HERV	ERV316A3	oneside	chr5	57854923	57857442	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02225	ENSG00000249584	32885	AC106822.1	ENSG00000249198	103206	None	None
ERV316A3_5q11.2l	HERV	ERV316A3	prototype	chr5	57948669	57951270	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02225	ENSG00000249584	49507	LINC02101	ENSG00000248132	156361	None	None
ERVLE_5q11.2d	HERV	ERVLE	internal	chr5	57972916	57975460	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02101	ENSG00000248132	132171	LINC02225	ENSG00000249584	73754	None	None
MER41_5q11.2c	HERV	MER41	oneside	chr5	58379117	58382765	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGAM1P1	ENSG00000248271	217365	PLK2	ENSG00000145632	71217	None	None
ERVL_5q11.2	HERV	ERVL	oneside	chr5	58980759	58983927	-	noncoding	PDE4D	protein_coding	SENSE	ENSG00000113448	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_5q11.2	HERV	HERVFRD	oneside	chr5	59309872	59316129	+	noncoding	PDE4D,AC008833.1	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000113448,ENSG00000276214	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:59311497-59311500
HERVL18_5q12.1	HERV	HERVL18	prototype	chr5	59713242	59716428	+	noncoding	PDE4D	protein_coding	ANTISENSE	ENSG00000113448	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_5q12.1	HERV	HERVW	prototype	chr5	60658495	60666453	+	noncoding	DEPDC1B	protein_coding	ANTISENSE	ENSG00000035499	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q12.1a	HERV	ERV316A3	oneside	chr5	60670640	60671772	+	noncoding	DEPDC1B	protein_coding	ANTISENSE	ENSG00000035499	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q12.1b	HERV	ERV316A3	oneside	chr5	61172131	61174398	+	noncoding	SMIM15-AS1	lncRNA	SENSE	ENSG00000251279	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5q12.1a	HERV	ERVLB4	internal	chr5	61712675	61717214	-	noncoding	C5orf64	lncRNA	ANTISENSE	ENSG00000178722	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q12.1c	HERV	ERV316A3	oneside	chr5	61750186	61751743	+	noncoding	C5orf64	lncRNA	SENSE	ENSG00000178722	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5q12.1b	HERV	ERVLB4	internal	chr5	61771921	61773528	-	noncoding	C5orf64	lncRNA	ANTISENSE	ENSG00000178722	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q12.1d	HERV	ERV316A3	oneside	chr5	61886661	61887929	-	noncoding	AC008877.1	lncRNA	ANTISENSE	ENSG00000248199	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5q12.1a	HERV	HERVL	oneside	chr5	61908053	61913030	-	noncoding	AC008877.1	lncRNA	ANTISENSE	ENSG00000248199	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_5q12.1	HERV	MER61	oneside	chr5	61913033	61916159	+	noncoding	AC008877.1	lncRNA	SENSE	ENSG00000248199	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5q12.1c	HERV	ERVLB4	internal	chr5	61962801	61965211	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008877.1	ENSG00000248199	35667	RN7SKP157	ENSG00000251983	181454	None	None
ERV316A3_5q12.1e	HERV	ERV316A3	oneside	chr5	62100486	62101691	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008877.1	ENSG00000248199	173352	RN7SKP157	ENSG00000251983	44974	None	None
HERVL_5q12.1b	HERV	HERVL	oneside	chr5	62102349	62108693	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008877.1	ENSG00000248199	175215	RN7SKP157	ENSG00000251983	37972	None	None
ERV316A3_5q12.1f	HERV	ERV316A3	internal	chr5	62108696	62110771	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008877.1	ENSG00000248199	181562	RN7SKP157	ENSG00000251983	35894	None	None
HERVL_5q12.1c	HERV	HERVL	oneside	chr5	62960806	62961775	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113420.1	ENSG00000249579	61144	ISCA1P1	ENSG00000217416	183543	None	None
ERVLB4_5q12.2a	HERV	ERVLB4	internal	chr5	63647667	63648310	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC122707.1	ENSG00000248285	309583	AC008558.1	ENSG00000287179	76050	None	None
ERVLB4_5q12.2b	HERV	ERVLB4	internal	chr5	63648391	63649301	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC122707.1	ENSG00000248285	308592	AC008558.1	ENSG00000287179	76774	None	None
PABLB_5q12.2	HERV	PABLB	prototype	chr5	63685995	63690879	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC122707.1	ENSG00000248285	267014	AC008558.1	ENSG00000287179	114378	None	chr5:63690658-63690668,chr5:63690601-63690605
ERV316A3_5q12.3a	HERV	ERV316A3	oneside	chr5	64096805	64099692	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNF180	ENSG00000164197	66151	AC122707.1	ENSG00000248285	115762	None	None
ERVLE_5q12.3a	HERV	ERVLE	oneside	chr5	64374699	64377488	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNF180	ENSG00000164197	1830	AC091862.1	ENSG00000236068	27024	None	None
ERVLB4_5q12.3a	HERV	ERVLB4	unknown	chr5	64377489	64381250	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091862.1	ENSG00000236068	23262	RNF180	ENSG00000164197	4620	None	None
HUERSP1_5q12.3	HERV	HUERSP1	prototype	chr5	64440642	64445853	+	noncoding	AC091862.1	unitary_pseudogene	ANTISENSE	ENSG00000236068	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q12.3b	HERV	ERV316A3	oneside	chr5	64617128	64617852	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPL49P1	ENSG00000224296	57001	RGS7BP	ENSG00000186479	4809	None	None
ERVLE_5q12.3b	HERV	ERVLE	internal	chr5	64617853	64619221	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPL49P1	ENSG00000224296	55632	RGS7BP	ENSG00000186479	5534	None	None
MER4_5q12.3a	HERV	MER4	oneside	chr5	64705696	64708622	-	noncoding	SHISAL2B	protein_coding	ANTISENSE	ENSG00000145642	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q12.3c	HERV	ERV316A3	internal	chr5	65120559	65123334	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092354.1	ENSG00000272354	99570	AC008847.1	ENSG00000207439	35	None	None
HARLEQUIN_5q12.3	HERV	HARLEQUIN	oneside	chr5	65174180	65179688	+	coding	ADAMTS6	protein_coding	ANTISENSE	ENSG00000049192	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5q12.3	HERV	HERVL	oneside	chr5	65486807	65491213	-	noncoding	AC025176.1	lncRNA	SENSE	ENSG00000250081	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q12.3d	HERV	ERV316A3	oneside	chr5	65886720	65888891	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010359.2	ENSG00000269961	35738	NLN	ENSG00000123213	14995	None	None
HERVL40_5q12.3	HERV	HERVL40	oneside	chr5	66091510	66092988	+	noncoding	AC025442.2	lncRNA	SENSE	ENSG00000285999	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q12.3c	HERV	ERVLE	internal	chr5	66416814	66418774	-	noncoding	AC092353.2	lncRNA	SENSE	ENSG00000286062	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_5q12.3b	HERV	MER4	oneside	chr5	66465762	66470705	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02229	ENSG00000250313	36675	AC092353.2	ENSG00000286062	25406	None	None
MER4_5q12.3c	HERV	MER4	oneside	chr5	66470947	66474000	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02229	ENSG00000250313	33380	AC092353.2	ENSG00000286062	30591	None	None
MER4B_5q12.3	HERV	MER4B	internal	chr5	66471715	66472620	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02229	ENSG00000250313	34760	AC092353.2	ENSG00000286062	31359	None	None
ERVLB4_5q12.3b	HERV	ERVLB4	oneside	chr5	66505357	66507400	-	noncoding	LINC02229	lncRNA	SENSE	ENSG00000250313	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q12.3e	HERV	ERV316A3	oneside	chr5	67374999	67376628	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008459.1	ENSG00000286647	8696	AC112206.2	ENSG00000249364	2750	None	None
ERVLB4_5q13.1	HERV	ERVLB4	internal	chr5	67579646	67581628	+	noncoding	AC112206.2	lncRNA	SENSE	ENSG00000249364	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q13.1	HERV	ERV316A3	internal	chr5	67672538	67674659	-	noncoding	AC112206.2	lncRNA	ANTISENSE	ENSG00000249364	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:67674106-67674505	None
HERVL18_5q13.1	HERV	HERVL18	prototype	chr5	68930005	68933114	-	noncoding	AC093523.2	lncRNA	SENSE	ENSG00000249335	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVEA_5q13.1	HERV	HERVEA	oneside	chr5	69087915	69089974	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC30A5	ENSG00000145740	3975	SUMO2P4	ENSG00000249183	18715	None	None
HML6_5q13.2a	HERV	HML6	oneside	chr5	69765658	69767605	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GUSBP3	ENSG00000253203	86399	AC131392.1	ENSG00000198237	107666	None	None
LTR23_5q13.2a	HERV	LTR23	internal	chr5	69811332	69813147	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GUSBP3	ENSG00000253203	132073	AC131392.1	ENSG00000198237	62124	None	None
HML6_5q13.2b	HERV	HML6	oneside	chr5	70345506	70347452	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138866.1	ENSG00000253816	86576	GTF2H2B	ENSG00000226259	67900	None	None
LTR23_5q13.2b	HERV	LTR23	internal	chr5	70617430	70619245	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GUSBP16	ENSG00000253366	131939	AC146944.1	ENSG00000196302	62164	None	None
HML6_5q13.2c	HERV	HML6	oneside	chr5	70662608	70664554	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GUSBP16	ENSG00000253366	86630	AC146944.1	ENSG00000196302	107342	None	None
LTR23_5q13.2c	HERV	LTR23	internal	chr5	70686226	70688040	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC146944.1	ENSG00000196302	130960	GUSBP16	ENSG00000253366	63144	None	None
HML6_5q13.2d	HERV	HML6	oneside	chr5	71344935	71346881	+	noncoding	LINC02197	lncRNA	ANTISENSE	ENSG00000250387	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q13.2a	HERV	ERVLE	internal	chr5	71568176	71570697	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MCCC2	ENSG00000131844	16591	BDP1	ENSG00000145734	356	None	None
HML6_5q13.2e	HERV	HML6	prototype	chr5	71571897	71578401	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	BDP1	ENSG00000145734	4077	MCCC2	ENSG00000131844	8887	None	chr5:71572212-71572217
ERVLE_5q13.2b	HERV	ERVLE	internal	chr5	71677044	71678515	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MCCC2	ENSG00000131844	18338	CARTPT	ENSG00000164326	40760	None	None
ERV316A3_5q13.2a	HERV	ERV316A3	oneside	chr5	71815204	71817568	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025774.1	ENSG00000285804	270214	AC143336.1	ENSG00000278824	58903	None	None
HERVL_5q13.2	HERV	HERVL	prototype	chr5	71896433	71902695	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC143336.1	ENSG00000278824	140132	AC025774.1	ENSG00000285804	185087	None	None
ERV316A3_5q13.2b	HERV	ERV316A3	prototype	chr5	71964788	71967151	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025774.1	ENSG00000285804	120631	AC143336.1	ENSG00000278824	208487	None	None
ERV316A3_5q13.2c	HERV	ERV316A3	oneside	chr5	71984718	71989999	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC143336.1	ENSG00000278824	228417	AC025774.1	ENSG00000285804	97783	None	None
ERV316A3_5q13.2d	HERV	ERV316A3	prototype	chr5	71996929	72000851	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC143336.1	ENSG00000278824	240628	AC025774.1	ENSG00000285804	86931	None	None
ERV316A3_5q13.2e	HERV	ERV316A3	oneside	chr5	72436472	72438726	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	YBX1P5	ENSG00000251108	18137	AC093278.2	ENSG00000261269	1177	None	None
HERV9_5q13.2	HERV	HERV9	prototype	chr5	72925317	72936334	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TNPO1	ENSG00000083312	8584	AC008972.1	ENSG00000271926	17301	None	None
ERVLE_5q13.2c	HERV	ERVLE	internal	chr5	73166154	73170217	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM174	ENSG00000164325	2976	AC116345.2	ENSG00000250747	13216	None	None
ERVLE_5q13.2d	HERV	ERVLE	oneside	chr5	73395554	73398002	+	noncoding	AC099522.1	transcribed_processed_pseudogene	SENSE	ENSG00000249149	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q13.2f	HERV	ERV316A3	internal	chr5	73480666	73481544	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099522.2	ENSG00000272525	16006	LINC01386	ENSG00000251324	7770	None	None
ERVLB4_5q13.2	HERV	ERVLB4	internal	chr5	73481793	73488217	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099522.2	ENSG00000272525	9333	LINC01386	ENSG00000251324	8897	None	None
MER4B_5q13.2	HERV	MER4B	oneside	chr5	73486648	73487460	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01386	ENSG00000251324	13752	AC099522.2	ENSG00000272525	10090	None	None
HERVL_5q13.3	HERV	HERVL	prototype	chr5	74785888	74792672	+	noncoding	FAM169A	protein_coding	ANTISENSE	ENSG00000198780	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q13.3a	HERV	ERVLE	internal	chr5	75278955	75279891	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANKRD31	ENSG00000145700	42044	AC008897.2	ENSG00000247372	40264	None	None
MER4_5q13.3a	HERV	MER4	oneside	chr5	75285193	75286999	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANKRD31	ENSG00000145700	48282	AC008897.2	ENSG00000247372	33156	None	None
MER4_5q13.3b	HERV	MER4	oneside	chr5	75293709	75299636	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANKRD31	ENSG00000145700	56798	AC008897.2	ENSG00000247372	20519	None	None
HERVW_5q13.3	HERV	HERVW	oneside	chr5	75304455	75306428	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANKRD31	ENSG00000145700	67544	AC008897.2	ENSG00000247372	13727	None	None
ERV316A3_5q13.3a	HERV	ERV316A3	internal	chr5	75864386	75865984	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108120.3	ENSG00000251419	31622	AC108120.2	ENSG00000249301	44299	None	None
ERVLE_5q13.3b	HERV	ERVLE	internal	chr5	75956974	75958253	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108120.1	ENSG00000228367	35314	SAP18P1	ENSG00000249777	117278	None	None
ERVLB4_5q13.3a	HERV	ERVLB4	internal	chr5	76199651	76200272	+	noncoding	SV2C	protein_coding	SENSE	ENSG00000122012	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_5q13.3a	HERV	HERVH	prototype	chr5	76357256	76363071	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SV2C	ENSG00000122012	3317	SNRPCP2	ENSG00000251235	13604	None	None
ERVLB4_5q13.3b	HERV	ERVLB4	internal	chr5	76627891	76628460	+	noncoding	IQGAP2	protein_coding	SENSE	ENSG00000145703	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_5q13.3	HERV	MER41	oneside	chr5	76780826	76782667	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	F2R	ENSG00000181104	45056	F2RL1	ENSG00000164251	36266	None	None
HERVH_5q13.3b	HERV	HERVH	prototype	chr5	76879901	76887017	-	noncoding	S100Z	protein_coding	ANTISENSE	ENSG00000171643	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q13.3b	HERV	ERV316A3	internal	chr5	77121989	77122683	-	noncoding	AC008581.2,ZBED3-AS1,AC022414.1	protein_coding,lncRNA,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000285000,ENSG00000250802,ENSG00000284762	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q13.3c	HERV	ERVLE	internal	chr5	77126832	77127905	-	noncoding	AC008581.2,ZBED3-AS1,AC022414.1	protein_coding,lncRNA,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000285000,ENSG00000250802,ENSG00000284762	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q13.3c	HERV	ERV316A3	oneside	chr5	77133891	77135356	+	noncoding	AC008581.2,ZBED3-AS1,AC022414.1	protein_coding,lncRNA,protein_coding	SENSE,SENSE,SENSE	ENSG00000285000,ENSG00000250802,ENSG00000284762	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4B_5q13.3	HERV	MER4B	internal	chr5	77392679	77397596	-	noncoding	AC022414.1,PDE8B	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000284762,ENSG00000113231	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_5q14.1	HERV	MER4B	oneside	chr5	77751478	77756649	-	coding	TBCA	protein_coding	SENSE	ENSG00000171530	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:77751578-77751580
MER4_5q14.1	HERV	MER4	oneside	chr5	77756674	77757868	-	noncoding	TBCA	protein_coding	SENSE	ENSG00000171530	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q14.1	HERV	ERV316A3	oneside	chr5	79228212	79231720	+	noncoding	DMGDH,AC016559.3	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000132837,ENSG00000250330	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_5q14.1	HERV	HUERSP1	unknown	chr5	79577555	79581022	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093270.4	ENSG00000277818	14709	TENT2	ENSG00000164329	31098	None	None
HERV4_5q14.1a	HERV	HERV4	oneside	chr5	80890887	80893148	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RASGRF2-AS1	ENSG00000251450	54546	MSH3	ENSG00000113318	14072	None	None
HERV4_5q14.1b	HERV	HERV4	oneside	chr5	80893312	80901510	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RASGRF2-AS1	ENSG00000251450	46184	MSH3	ENSG00000113318	16497	None	None
HERVL40_5q14.1	HERV	HERVL40	internal	chr5	80973111	80974789	-	noncoding	RASGRF2	protein_coding	ANTISENSE	ENSG00000113319	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_5q14.1	HERV	ERVL	internal	chr5	81948281	81949967	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SEM1P1	ENSG00000214857	55560	ATG10	ENSG00000152348	22056	None	None
HERVH_5q14.1	HERV	HERVH	prototype	chr5	81953304	81959235	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SEM1P1	ENSG00000214857	60583	ATG10	ENSG00000152348	12788	None	None
HARLEQUIN_5q14.2	HERV	HARLEQUIN	prototype	chr5	82267274	82273743	-	coding	ATG10,RPS23	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000152348,ENSG00000186468	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q14.2	HERV	ERVLE	internal	chr5	82320173	82321822	+	noncoding	ATP6AP1L	protein_coding	SENSE	ENSG00000205464	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q14.2	HERV	ERV316A3	oneside	chr5	82703975	82707538	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008885.2	ENSG00000249100	57866	AC026782.2	ENSG00000248870	116564	None	None
HERVIP10F_5q14.2	HERV	HERVIP10F	oneside	chr5	82969116	82971949	-	coding	ST13P12	processed_pseudogene	ANTISENSE	ENSG00000248400	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:82969238-82969243
HERVIP10FH_5q14.2	HERV	HERVIP10FH	oneside	chr5	82971940	82976282	-	noncoding	ST13P12	processed_pseudogene	ANTISENSE	ENSG00000248400	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:82975710-82975723
ERVLB4_5q14.3a	HERV	ERVLB4	internal	chr5	83623959	83626511	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VCAN	ENSG00000038427	41656	HAPLN1	ENSG00000145681	11294	None	None
ERVLB4_5q14.3b	HERV	ERVLB4	oneside	chr5	83918855	83920467	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZP3P1	ENSG00000250013	43034	EDIL3	ENSG00000164176	20087	chr5:83919048-83919320	None
HERVL32_5q14.3	HERV	HERVL32	prototype	chr5	84172727	84175214	+	noncoding	EDIL3	protein_coding	ANTISENSE	ENSG00000164176	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q14.3a	HERV	ERV316A3	prototype	chr5	84588454	84589842	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EDIL3-DT	ENSG00000250320	97689	PPIAP79	ENSG00000214853	409970	None	None
ERVLE_5q14.3a	HERV	ERVLE	internal	chr5	84652645	84654393	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EDIL3-DT	ENSG00000250320	161880	PPIAP79	ENSG00000214853	345419	None	None
ERVLB4_5q14.3c	HERV	ERVLB4	internal	chr5	84654576	84655272	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EDIL3-DT	ENSG00000250320	163811	PPIAP79	ENSG00000214853	344540	None	None
HERVH_5q14.3a	HERV	HERVH	oneside	chr5	84698675	84704204	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EDIL3-DT	ENSG00000250320	207910	PPIAP79	ENSG00000214853	295608	None	None
HERVL_5q14.3a	HERV	HERVL	oneside	chr5	84846253	84850359	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EDIL3-DT	ENSG00000250320	355488	PPIAP79	ENSG00000214853	149453	None	None
ERV316A3_5q14.3b	HERV	ERV316A3	internal	chr5	85095940	85097356	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114928.1	ENSG00000249349	14986	PPIAP79	ENSG00000214853	95625	None	None
ERVLE_5q14.3b	HERV	ERVLE	internal	chr5	85141075	85142885	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBBP4P6	ENSG00000248674	47744	AC114928.1	ENSG00000249349	28319	None	None
HERVL_5q14.3b	HERV	HERVL	prototype	chr5	85244688	85251252	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010486.1	ENSG00000248667	168776	AC117522.1	ENSG00000248170	6614	None	None
ERV316A3_5q14.3c	HERV	ERV316A3	internal	chr5	85438901	85442542	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010486.2	ENSG00000249023	8717	AC010486.3	ENSG00000249842	4432	None	None
HERVP71A_5q14.3	HERV	HERVP71A	oneside	chr5	85647002	85648160	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010595.1	ENSG00000250874	15072	AC026700.1	ENSG00000251066	97050	None	chr5:85647755-85647773,chr5:85647812-85647827
HERVL40_5q14.3a	HERV	HERVL40	oneside	chr5	85787161	85790185	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026414.1	ENSG00000249153	58317	RPS2P25	ENSG00000241965	24023	None	None
MER4B_5q14.3	HERV	MER4B	oneside	chr5	85808049	85814668	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026414.1	ENSG00000249153	33834	RPS2P25	ENSG00000241965	44911	None	None
ERVLE_5q14.3c	HERV	ERVLE	internal	chr5	85870660	85874930	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026414.1	ENSG00000249153	21461	PTP4A1P4	ENSG00000250359	212596	None	None
ERV316A3_5q14.3d	HERV	ERV316A3	internal	chr5	85934428	85938321	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026414.1	ENSG00000249153	85229	PTP4A1P4	ENSG00000250359	149205	None	None
HERVL40_5q14.3b	HERV	HERVL40	oneside	chr5	86148137	86149506	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTP4A1P4	ENSG00000250359	60290	NBPF22P	ENSG00000205449	132954	None	None
ERVLE_5q14.3d	HERV	ERVLE	internal	chr5	86150931	86152369	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NBPF22P	ENSG00000205449	130091	PTP4A1P4	ENSG00000250359	63084	None	None
HERVL_5q14.3c	HERV	HERVL	oneside	chr5	86454741	86460142	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026444.1	ENSG00000251585	51781	COX7C	ENSG00000127184	157786	None	None
HERVEA_5q14.3	HERV	HERVEA	oneside	chr5	86460144	86461981	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026444.1	ENSG00000251585	57184	COX7C	ENSG00000127184	155947	None	None
HERVE_5q14.3a	HERV	HERVE	oneside	chr5	86461981	86465707	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026444.1	ENSG00000251585	59021	COX7C	ENSG00000127184	152221	None	chr5:86462403-86462407
HERVL_5q14.3d	HERV	HERVL	oneside	chr5	86465708	86468278	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026444.1	ENSG00000251585	62748	COX7C	ENSG00000127184	149650	None	None
HERVE_5q14.3b	HERV	HERVE	prototype	chr5	86565179	86571036	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	COX7C	ENSG00000127184	46892	AC026444.1	ENSG00000251585	162219	None	chr5:86570447-86570466,chr5:86570786-86570805
HERVL40_5q14.3c	HERV	HERVL40	prototype	chr5	86879051	86882634	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091429.1	ENSG00000242477	1597	AC008539.1	ENSG00000248701	78771	None	None
ERV316A3_5q14.3e	HERV	ERV316A3	oneside	chr5	86999875	87003125	-	noncoding	AC109492.1	lncRNA	ANTISENSE	ENSG00000249061	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:87002521-87002823	None
HERVL_5q14.3e	HERV	HERVL	oneside	chr5	87047284	87051798	-	noncoding	AC109492.1,LINC01949	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000249061,ENSG00000233828	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5q14.3d	HERV	ERVLB4	prototype	chr5	87419106	87422676	-	noncoding	AC018754.1,RNU6-727P	lncRNA,snRNA	ANTISENSE,SENSE	ENSG00000285190,ENSG00000200462	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_5q14.3a	HERV	HML3	oneside	chr5	87510331	87516126	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC018754.1	ENSG00000285190	10991	LINC02488	ENSG00000249362	145914	None	None
HML3_5q14.3b	HERV	HML3	unknown	chr5	87519088	87520375	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018754.1	ENSG00000285190	19748	LINC02488	ENSG00000249362	141665	None	None
ERVLE_5q14.3e	HERV	ERVLE	internal	chr5	87553205	87556391	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02488	ENSG00000249362	105649	AC018754.1	ENSG00000285190	53865	None	None
HERVL_5q14.3f	HERV	HERVL	prototype	chr5	87589074	87595553	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02488	ENSG00000249362	66487	AC018754.1	ENSG00000285190	89734	None	None
HUERSP1_5q14.3	HERV	HUERSP1	prototype	chr5	87713694	87722107	-	noncoding	LINC02144	lncRNA	SENSE	ENSG00000248708	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:87720381-87720427
ERV316A3_5q14.3f	HERV	ERV316A3	oneside	chr5	87987779	87990484	+	noncoding	AC114971.1	lncRNA	ANTISENSE	ENSG00000287862	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_5q14.3c	HERV	HERVE	oneside	chr5	88188620	88190729	-	noncoding	TMEM161B	protein_coding	SENSE	ENSG00000164180	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q14.3f	HERV	ERVLE	internal	chr5	88639693	88642676	-	noncoding	LINC00461	lncRNA	SENSE	ENSG00000245526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_5q14.3d	HERV	HERVL40	oneside	chr5	88706408	88709520	-	noncoding	MEF2C-AS2	lncRNA	ANTISENSE	ENSG00000245864	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5q14.3e	HERV	ERVLB4	oneside	chr5	89104385	89106374	-	noncoding	MEF2C-AS1	lncRNA	ANTISENSE	ENSG00000248309	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q14.3g	HERV	ERV316A3	prototype	chr5	89487892	89495921	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074131.1	ENSG00000250831	17853	LINC02161	ENSG00000250437	85288	None	None
ERVLE_5q14.3g	HERV	ERVLE	internal	chr5	89517918	89519053	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02161	ENSG00000250437	62156	AC074131.1	ENSG00000250831	47879	None	None
MER41_5q14.3a	HERV	MER41	oneside	chr5	89917678	89919657	-	noncoding	AC113167.1	lncRNA	ANTISENSE	ENSG00000214942	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q14.3h	HERV	ERV316A3	internal	chr5	89990585	89994670	-	noncoding	AC113167.1	lncRNA	ANTISENSE	ENSG00000214942	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q14.3i	HERV	ERV316A3	internal	chr5	90251188	90252269	-	noncoding	LINC01339	lncRNA	SENSE	ENSG00000248555	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q14.3j	HERV	ERV316A3	internal	chr5	90670326	90671542	+	noncoding	ADGRV1	protein_coding	SENSE	ENSG00000164199	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q14.3h	HERV	ERVLE	internal	chr5	91228239	91228982	-	noncoding	LUCAT1	lncRNA	SENSE	ENSG00000248323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_5q14.3	HERV	HUERSP3	internal	chr5	91445972	91447921	-	noncoding	ARRDC3-AS1	lncRNA	ANTISENSE	ENSG00000281357	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_5q14.3b	HERV	MER41	internal	chr5	91592678	91593519	-	noncoding	ARRDC3-AS1	lncRNA	ANTISENSE	ENSG00000281357	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q14.3i	HERV	ERVLE	internal	chr5	91881023	91882036	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114316.1	ENSG00000250049	200561	PCBP2P3	ENSG00000248826	36494	None	None
HERVL_5q14.3g	HERV	HERVL	oneside	chr5	92060113	92065277	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PCBP2P3	ENSG00000248826	215584	AC114316.1	ENSG00000250049	17320	None	None
ERVLB4_5q14.3f	HERV	ERVLB4	oneside	chr5	92163047	92165164	-	noncoding	AC114316.1	lncRNA	ANTISENSE	ENSG00000250049	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5q14.3h	HERV	HERVL	prototype	chr5	92215209	92221650	+	noncoding	AC114316.1	lncRNA	SENSE	ENSG00000250049	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_5q14.3b	HERV	HERVH	prototype	chr5	92823742	92829706	+	noncoding	AC008517.1	lncRNA	SENSE	ENSG00000248588	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q15a	HERV	ERVLE	internal	chr5	93772880	93773577	+	noncoding	FAM172A	protein_coding	ANTISENSE	ENSG00000113391	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_5q15	HERV	MER4B	internal	chr5	94016254	94017183	+	noncoding	FAM172A	protein_coding	ANTISENSE	ENSG00000113391	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_5q15a	HERV	MER41	prototype	chr5	94039191	94045415	+	noncoding	FAM172A	protein_coding	ANTISENSE	ENSG00000113391	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:94040961-94041036	None
ERVLE_5q15b	HERV	ERVLE	internal	chr5	94443871	94444658	+	noncoding	KIAA0825	protein_coding	ANTISENSE	ENSG00000185261	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_5q15	HERV	PABLA	internal	chr5	94539535	94543159	+	noncoding	KIAA0825	protein_coding	ANTISENSE	ENSG00000185261	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL66_5q15	HERV	HERVL66	oneside	chr5	95258771	95260799	+	noncoding	MCTP1	protein_coding	ANTISENSE	ENSG00000175471	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVS71_5q15	HERV	HERVS71	oneside	chr5	95707337	95712075	-	coding	AC008840.1	lncRNA	SENSE	ENSG00000250240	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q15a	HERV	ERV316A3	prototype	chr5	96058097	96063559	+	noncoding	AC104123.1,MIR583HG	lncRNA,lncRNA	SENSE,SENSE	ENSG00000251314,ENSG00000250551	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_5q15a	HERV	HERVH	oneside	chr5	96166828	96172420	-	noncoding	AC104123.1,MIR583HG	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000251314,ENSG00000250551	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:96171974-96172344	chr5:96172062-96172081
ERV316A3_5q15b	HERV	ERV316A3	internal	chr5	96346470	96347455	-	noncoding	AC104123.1	lncRNA	ANTISENSE	ENSG00000251314	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q15c	HERV	ERVLE	internal	chr5	96545379	96548743	-	noncoding	AC104123.1,CAST	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000251314,ENSG00000153113	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q15c	HERV	ERV316A3	oneside	chr5	97186903	97187859	+	noncoding	LIX1-AS1,AC008883.3	lncRNA,lncRNA	SENSE,SENSE	ENSG00000251513,ENSG00000286828	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_5q15	HERV	HERV9	prototype	chr5	97308763	97318438	-	noncoding	LIX1-AS1	lncRNA	ANTISENSE	ENSG00000251513	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q15d	HERV	ERVLE	internal	chr5	97422345	97426772	-	noncoding	LIX1-AS1	lncRNA	ANTISENSE	ENSG00000251513	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_5q15a	HERV	LTR25	internal	chr5	97465512	97466398	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01340	ENSG00000250331	38265	AC106748.1	ENSG00000249977	15771	None	None
ERVLE_5q15e	HERV	ERVLE	internal	chr5	97761554	97764135	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC112203.1	ENSG00000251193	22641	AC122697.1	ENSG00000286953	35269	None	None
MER41_5q15b	HERV	MER41	internal	chr5	97802616	97809144	-	noncoding	AC122697.1	lncRNA	SENSE	ENSG00000286953	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q15f	HERV	ERVLE	internal	chr5	97829046	97830726	-	noncoding	AC122697.1	lncRNA	SENSE	ENSG00000286953	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5q15	HERV	HERVL	prototype	chr5	98029190	98035725	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01846	ENSG00000248901	50141	AC008834.1	ENSG00000249101	3051	None	None
HERVH_5q15b	HERV	HERVH	oneside	chr5	98080083	98085315	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008834.1	ENSG00000249101	53944	LINC01846	ENSG00000248901	551	chr5:98082548-98082734	None
ERV316A3_5q15d	HERV	ERV316A3	oneside	chr5	98413130	98415981	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTBP2P4	ENSG00000251102	160360	MTCO1P24	ENSG00000249448	1338	chr5:98414889-98415361	chr5:98414889-98414893
HERVH_5q15c	HERV	HERVH	prototype	chr5	98434516	98441337	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO1P24	ENSG00000249448	22724	CTBP2P4	ENSG00000251102	135004	None	None
ERV316A3_5q15e	HERV	ERV316A3	oneside	chr5	98486057	98491837	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO1P24	ENSG00000249448	74265	CTBP2P4	ENSG00000251102	84504	None	None
ERVLE_5q15g	HERV	ERVLE	internal	chr5	98653400	98654318	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTBP2P4	ENSG00000251102	76140	DDX18P4	ENSG00000251553	25084	None	None
LTR25_5q15b	HERV	LTR25	internal	chr5	98839880	98843293	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CHD1	ENSG00000153922	10692	CSNK1A1P3	ENSG00000250162	6169	chr5:98839618-98839958	None
LTR25_5q15c	HERV	LTR25	internal	chr5	98843582	98846022	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CHD1	ENSG00000153922	7963	CSNK1A1P3	ENSG00000250162	9871	None	None
ERV316A3_5q21.1a	HERV	ERV316A3	internal	chr5	98944571	98947229	-	noncoding	LINC02062	lncRNA	ANTISENSE	ENSG00000248489	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q21.1a	HERV	ERVLE	internal	chr5	99003302	99005978	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02062	ENSG00000248489	8289	AC114324.2	ENSG00000249444	483581	None	None
HERVH_5q21.1a	HERV	HERVH	prototype	chr5	99010824	99016954	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114324.2	ENSG00000249444	472605	LINC02062	ENSG00000248489	15811	None	None
ERV316A3_5q21.1b	HERV	ERV316A3	oneside	chr5	99842677	99844867	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092284.1	ENSG00000250391	103428	AC008837.2	ENSG00000248928	247380	None	None
ERVLE_5q21.1b	HERV	ERVLE	internal	chr5	99899489	99901357	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092284.1	ENSG00000250391	46938	AC008837.2	ENSG00000248928	304192	None	None
MER41_5q21.1a	HERV	MER41	internal	chr5	100162370	100163828	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113385.3	ENSG00000275374	211872	RNU6-1119P	ENSG00000207077	8591	None	None
LTR25_5q21.1a	HERV	LTR25	internal	chr5	100419483	100423586	+	noncoding	AC113385.1	lncRNA	SENSE	ENSG00000249787	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER61_5q21.1	HERV	MER61	prototype	chr5	100639136	100642471	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM174A	ENSG00000174132	52395	AC027315.1	ENSG00000250806	11641	None	None
ERVLE_5q21.1c	HERV	ERVLE	internal	chr5	100798069	100800597	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP62	ENSG00000207269	64683	ST8SIA4	ENSG00000113532	6336	None	None
HERVH_5q21.1b	HERV	HERVH	prototype	chr5	100984292	100990224	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL802P	ENSG00000277506	591606	ST8SIA4	ENSG00000113532	81010	None	None
HERV4_5q21.1	HERV	HERV4	oneside	chr5	101047208	101050484	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ST8SIA4	ENSG00000113532	143926	RN7SL802P	ENSG00000277506	531346	None	None
ERVLB4_5q21.1	HERV	ERVLB4	prototype	chr5	101073618	101078991	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ST8SIA4	ENSG00000113532	170336	RN7SL802P	ENSG00000277506	502839	None	None
HERVH_5q21.1c	HERV	HERVH	prototype	chr5	101315240	101320597	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ST8SIA4	ENSG00000113532	411958	RN7SL802P	ENSG00000277506	261233	None	None
MER41_5q21.1b	HERV	MER41	internal	chr5	101394038	101397196	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ST8SIA4	ENSG00000113532	490756	RN7SL802P	ENSG00000277506	184634	None	None
ERV316A3_5q21.1c	HERV	ERV316A3	oneside	chr5	101483797	101486830	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ST8SIA4	ENSG00000113532	580515	RN7SL802P	ENSG00000277506	95000	None	None
LTR25_5q21.1b	HERV	LTR25	internal	chr5	101534634	101535838	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL802P	ENSG00000277506	45992	ST8SIA4	ENSG00000113532	631352	None	None
HERVL18_5q21.1	HERV	HERVL18	prototype	chr5	101758012	101763009	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR7H2P	ENSG00000251261	53466	RN7SL802P	ENSG00000277506	175884	None	None
PABLB_5q21.1	HERV	PABLB	internal	chr5	101952838	101954423	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117525.1	ENSG00000249495	21873	OR7H2P	ENSG00000251261	136058	None	None
HERVL_5q21.1	HERV	HERVL	oneside	chr5	101954496	101955931	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117525.1	ENSG00000249495	20365	OR7H2P	ENSG00000251261	137716	None	None
PRIMA41_5q21.1	HERV	PRIMA41	oneside	chr5	102337809	102346433	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLCO6A1	ENSG00000205359	25341	RN7SKP68	ENSG00000222987	34999	None	None
HERVL40_5q21.1	HERV	HERVL40	oneside	chr5	102434122	102436939	+	noncoding	SLCO6A1	protein_coding	ANTISENSE	ENSG00000205359	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q21.1d	HERV	ERVLE	internal	chr5	102481627	102484291	-	noncoding	SLCO6A1	protein_coding	SENSE	ENSG00000205359	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q21.2a	HERV	ERV316A3	oneside	chr5	103623073	103625763	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008505.1	ENSG00000283462	254366	NUDT12	ENSG00000112874	60283	None	None
HERVH_5q21.2a	HERV	HERVH	prototype	chr5	104031710	104037313	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008505.1	ENSG00000283462	140306	LINC02163	ENSG00000251026	42534	None	None
HERVH_5q21.2b	HERV	HERVH	prototype	chr5	104063635	104070481	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02163	ENSG00000251026	9366	AC008505.1	ENSG00000283462	172231	None	None
HUERSP3_5q21.2	HERV	HUERSP3	prototype	chr5	104177817	104182663	+	noncoding	LINC02163	lncRNA	SENSE	ENSG00000251026	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_5q21.2	HERV	HERVL18	prototype	chr5	104186177	104189485	+	noncoding	LINC02163	lncRNA	SENSE	ENSG00000251026	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH19_5q21.2	HERV	HERVFH19	oneside	chr5	104590997	104598725	+	noncoding	AC099520.1	lncRNA	ANTISENSE	ENSG00000251574	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q21.2b	HERV	ERV316A3	prototype	chr5	104742150	104747099	+	noncoding	AC099520.1	lncRNA	ANTISENSE	ENSG00000251574	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q21.2c	HERV	ERV316A3	internal	chr5	104772287	104774091	-	noncoding	AC099520.1,AC099520.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000251574,ENSG00000253776	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_5q21.2a	HERV	HERVL	prototype	chr5	104864533	104867738	+	coding	AC099520.1	lncRNA	ANTISENSE	ENSG00000251574	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5q21.2b	HERV	HERVL	oneside	chr5	104870810	104872029	+	noncoding	AC099520.1	lncRNA	ANTISENSE	ENSG00000251574	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_5q21.2	HERV	HUERSP2	internal	chr5	104871543	104872694	-	noncoding	AC099520.1	lncRNA	SENSE	ENSG00000251574	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5q21.2	HERV	ERVLB4	internal	chr5	104892563	104895292	-	noncoding	AC099520.1	lncRNA	SENSE	ENSG00000251574	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q21.2d	HERV	ERV316A3	oneside	chr5	105021251	105022827	-	noncoding	AC099520.1,AC091987.1	lncRNA,lncRNA	SENSE,SENSE	ENSG00000251574,ENSG00000253584	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5q21.3a	HERV	HERVL	prototype	chr5	105112297	105115549	-	noncoding	AC099520.1,AC091987.1	lncRNA,lncRNA	SENSE,SENSE	ENSG00000251574,ENSG00000253584	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_5q21.3a	HERV	HERVL40	oneside	chr5	105669579	105672089	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099520.1	ENSG00000251574	276609	RNA5SP189	ENSG00000201790	250905	None	None
HERVL_5q21.3b	HERV	HERVL	oneside	chr5	105993649	105996243	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP189	ENSG00000201790	70541	AC027313.1	ENSG00000251204	419333	None	None
MER34B_5q21.3	HERV	MER34B	oneside	chr5	106123290	106126091	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027313.1	ENSG00000251204	289485	RNA5SP189	ENSG00000201790	200182	None	None
HERVL40_5q21.3b	HERV	HERVL40	oneside	chr5	106451835	106453977	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027313.1	ENSG00000251204	34594	AC114940.1	ENSG00000250145	89089	None	None
HERVL_5q21.3c	HERV	HERVL	internal	chr5	106561148	106564105	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114940.2	ENSG00000252337	14345	LINC01950	ENSG00000251027	251092	None	None
HERVL18_5q21.3	HERV	HERVL18	prototype	chr5	106873494	106876978	-	coding	LINC01950	lncRNA	SENSE	ENSG00000251027	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5q21.3d	HERV	HERVL	prototype	chr5	106912744	106919416	-	noncoding	LINC01950	lncRNA	SENSE	ENSG00000251027	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q21.3a	HERV	ERVLE	internal	chr5	106967504	106968459	+	noncoding	LINC01950	lncRNA	ANTISENSE	ENSG00000251027	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_5q21.3a	HERV	HERVH	prototype	chr5	106978588	106984086	+	noncoding	LINC01950	lncRNA	ANTISENSE	ENSG00000251027	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr5:106978592-106978980	None
ERV316A3_5q21.3a	HERV	ERV316A3	prototype	chr5	107306016	107308065	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSMC1P5	ENSG00000250273	110684	EFNA5	ENSG00000184349	68824	None	None
ERV316A3_5q21.3b	HERV	ERV316A3	oneside	chr5	107837892	107839613	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FBXL17	ENSG00000145743	19422	RN7SKP122	ENSG00000251732	26968	None	None
HERVL_5q21.3e	HERV	HERVL	oneside	chr5	108231501	108232851	+	noncoding	FBXL17	protein_coding	ANTISENSE	ENSG00000145743	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_5q21.3b	HERV	HERVH	oneside	chr5	108551801	108555018	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008462.1	ENSG00000286503	133785	AC133134.1	ENSG00000244245	38591	None	None
HERVH_5q21.3c	HERV	HERVH	oneside	chr5	108567661	108574105	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC133134.1	ENSG00000244245	19504	AC008462.1	ENSG00000286503	149645	None	None
HERVW_5q21.3	HERV	HERVW	oneside	chr5	108574106	108578582	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC133134.1	ENSG00000244245	15027	AC008462.1	ENSG00000286503	156090	None	None
ERV316A3_5q21.3c	HERV	ERV316A3	internal	chr5	108672657	108673962	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC133134.1	ENSG00000244245	78690	LINC01023	ENSG00000272523	53863	None	None
ERV316A3_5q21.3d	HERV	ERV316A3	oneside	chr5	109244717	109245876	+	noncoding	AC008467.1	lncRNA	ANTISENSE	ENSG00000249476	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q21.3b	HERV	ERVLE	internal	chr5	109248100	109249569	-	noncoding	AC008467.1	lncRNA	SENSE	ENSG00000249476	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5q21.3a	HERV	ERVLB4	internal	chr5	109347949	109348565	+	noncoding	PJA2	protein_coding	ANTISENSE	ENSG00000198961	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q21.3c	HERV	ERVLE	internal	chr5	109348621	109349207	+	noncoding	PJA2	protein_coding	ANTISENSE	ENSG00000198961	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5q21.3b	HERV	ERVLB4	internal	chr5	109581737	109585071	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT18P42	ENSG00000214794	3267	AC091917.1	ENSG00000248440	82629	None	None
ERVLE_5q21.3d	HERV	ERVLE	internal	chr5	109686333	109686986	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012603.1	ENSG00000271849	816	KRT18P42	ENSG00000214794	96741	None	None
ERVLE_5q21.3e	HERV	ERVLE	internal	chr5	109687038	109687635	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012603.1	ENSG00000271849	167	KRT18P42	ENSG00000214794	97446	None	None
ERVLE_5q21.3f	HERV	ERVLE	internal	chr5	110081026	110083743	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGAM5P1	ENSG00000253224	195603	TMEM232	ENSG00000186952	205490	None	None
ERVLE_5q21.3g	HERV	ERVLE	oneside	chr5	110113084	110115281	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGAM5P1	ENSG00000253224	227661	TMEM232	ENSG00000186952	173952	None	None
HERVL_5q22.1a	HERV	HERVL	internal	chr5	110204112	110209648	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM232	ENSG00000186952	79585	PGAM5P1	ENSG00000253224	318689	None	None
HERVL_5q22.1b	HERV	HERVL	prototype	chr5	110315112	110317640	-	coding	TMEM232	protein_coding	SENSE	ENSG00000186952	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q22.1a	HERV	ERV316A3	oneside	chr5	110332422	110333505	-	noncoding	TMEM232	protein_coding	SENSE	ENSG00000186952	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr5:110333472-110333482	None
ERV316A3_5q22.1b	HERV	ERV316A3	internal	chr5	110333584	110335108	-	noncoding	TMEM232	protein_coding	SENSE	ENSG00000186952	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_5q22.1	HERV	HERVH	prototype	chr5	110530936	110535513	+	noncoding	TMEM232	protein_coding	ANTISENSE	ENSG00000186952	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:110535201-110535415	None
HERV4_5q22.1	HERV	HERV4	prototype	chr5	110535808	110543151	+	noncoding	TMEM232	protein_coding	ANTISENSE	ENSG00000186952	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:110536436-110536757	None
MER41_5q22.1	HERV	MER41	internal	chr5	110825666	110830331	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC25A46	ENSG00000164209	60505	AC008782.1	ENSG00000270779	77953	None	None
ERVLE_5q22.1a	HERV	ERVLE	internal	chr5	110871700	110874913	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC25A46	ENSG00000164209	106539	AC008782.1	ENSG00000270779	33371	None	None
ERVLE_5q22.1b	HERV	ERVLE	internal	chr5	111147729	111149651	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010468.3	ENSG00000250728	5593	WDR36	ENSG00000134987	17227	None	None
ERVLE_5q22.1c	HERV	ERVLE	internal	chr5	111289461	111290344	-	noncoding	CAMK4,AC010275.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000152495,ENSG00000248268	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_5q22.1	HERV	MER61	prototype	chr5	111663040	111667105	-	noncoding	STARD4-AS1,NREP	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000246859,ENSG00000134986	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_5q22.1	HERV	HERVL40	oneside	chr5	111829865	111834291	+	noncoding	NREP	protein_coding	ANTISENSE	ENSG00000134986	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_5q22.1	HERV	HUERSP3	internal	chr5	111921173	111927118	-	noncoding	NREP,NREP-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000134986,ENSG00000250095	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5q22.1c	HERV	HERVL	oneside	chr5	112041296	112047517	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EPB41L4A	ENSG00000129595	94924	NREP-AS1	ENSG00000250095	23987	None	None
ERVLB4_5q22.1	HERV	ERVLB4	internal	chr5	112104633	112105435	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NREP-AS1	ENSG00000250095	87324	EPB41L4A	ENSG00000129595	37006	None	None
ERVLE_5q22.2a	HERV	ERVLE	internal	chr5	112355855	112358227	+	noncoding	EPB41L4A	protein_coding	ANTISENSE	ENSG00000129595	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_5q22.2	HERV	HERVW	prototype	chr5	112443692	112451498	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EPB41L4A-DT	ENSG00000278921	22714	HMGB3P16	ENSG00000248430	1205	None	None
HERVEA_5q22.2	HERV	HERVEA	prototype	chr5	112523903	112532633	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P16	ENSG00000248430	70914	AC137549.1	ENSG00000251014	14340	chr5:112528623-112528786	None
ERVLE_5q22.2b	HERV	ERVLE	internal	chr5	112547505	112549086	+	noncoding	AC137549.1	processed_pseudogene	SENSE	ENSG00000251014	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL32_5q22.2a	HERV	HERVL32	oneside	chr5	112579908	112582855	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC137549.1	ENSG00000251014	32403	LINC02200	ENSG00000250358	45581	None	None
HERVL32_5q22.2b	HERV	HERVL32	oneside	chr5	112583255	112585456	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC137549.1	ENSG00000251014	35750	LINC02200	ENSG00000250358	42980	None	None
HERVFRD_5q22.2	HERV	HERVFRD	oneside	chr5	112608039	112610488	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC137549.1	ENSG00000251014	60534	LINC02200	ENSG00000250358	17948	None	None
ERVL_5q22.2	HERV	ERVL	oneside	chr5	112614332	112616265	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02200	ENSG00000250358	12171	AC137549.1	ENSG00000251014	66827	None	None
ERVLE_5q22.2c	HERV	ERVLE	internal	chr5	113132479	113133003	-	noncoding	MCC	protein_coding	SENSE	ENSG00000171444	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q22.2d	HERV	ERVLE	internal	chr5	113136161	113140639	-	noncoding	MCC	protein_coding	SENSE	ENSG00000171444	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_5q22.2	HERV	HUERSP3B	oneside	chr5	113605569	113611347	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	YTHDC2	ENSG00000047188	10284	AC093240.1	ENSG00000286839	126759	None	None
ERV316A3_5q22.2a	HERV	ERV316A3	internal	chr5	113707793	113708744	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	YTHDC2	ENSG00000047188	112508	AC093240.1	ENSG00000286839	29362	None	None
ERV316A3_5q22.2b	HERV	ERV316A3	oneside	chr5	113708768	113709991	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093240.1	ENSG00000286839	28115	YTHDC2	ENSG00000047188	113483	None	None
HML3_5q22.2	HERV	HML3	prototype	chr5	113711920	113716616	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	YTHDC2	ENSG00000047188	116635	AC093240.1	ENSG00000286839	21490	None	None
HERV4_5q22.2	HERV	HERV4	prototype	chr5	113771385	113777681	-	noncoding	AC093240.1	lncRNA	SENSE	ENSG00000286839	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q22.3a	HERV	ERVLE	internal	chr5	113902396	113903364	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCNN2	ENSG00000080709	152562	AC093240.1	ENSG00000286839	125559	None	None
ERVLE_5q22.3b	HERV	ERVLE	internal	chr5	114027777	114031826	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093240.1	ENSG00000286839	250940	KCNN2	ENSG00000080709	24100	None	None
HERVK11D_5q22.3	HERV	HERVK11D	prototype	chr5	114142955	114150230	-	noncoding	KCNN2	protein_coding	ANTISENSE	ENSG00000080709	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q22.3c	HERV	ERVLE	internal	chr5	114304099	114307874	-	noncoding	KCNN2	protein_coding	ANTISENSE	ENSG00000080709	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_5q22.3	HERV	LTR19	prototype	chr5	114722653	114726555	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010230.1	ENSG00000246316	54243	AC094104.2	ENSG00000251132	304718	None	None
HERV9_5q22.3	HERV	HERV9	prototype	chr5	114989528	115000106	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010230.1	ENSG00000246316	321118	AC094104.2	ENSG00000251132	31167	None	None
HML3_5q22.3	HERV	HML3	prototype	chr5	115036095	115042278	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC094104.1	ENSG00000250242	45614	AC094104.2	ENSG00000251132	4201	None	None
HUERSP3_5q22.3a	HERV	HUERSP3	oneside	chr5	115072552	115074029	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC094104.1	ENSG00000250242	13863	AC094104.2	ENSG00000251132	40658	None	None
HUERSP3_5q22.3b	HERV	HUERSP3	internal	chr5	115077136	115085288	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC094104.1	ENSG00000250242	2604	AC094104.2	ENSG00000251132	45242	None	None
ERVLE_5q22.3d	HERV	ERVLE	internal	chr5	115085715	115087935	+	noncoding	AC094104.1	lncRNA	ANTISENSE	ENSG00000250242	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_5q22.3c	HERV	HUERSP3	oneside	chr5	115327000	115328864	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC112	ENSG00000164221	30307	CTNNA1P1	ENSG00000249026	60779	None	None
ERVLE_5q22.3e	HERV	ERVLE	internal	chr5	115604301	115605777	+	noncoding	TMED7-TICAM2,AC010226.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000251201,ENSG00000249249	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q22.3f	HERV	ERVLE	internal	chr5	115636366	115637552	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008549.2	ENSG00000249021	53910	TMED7	ENSG00000134970	3374	None	None
HERVH_5q22.3	HERV	HERVH	prototype	chr5	115650820	115654984	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMED7	ENSG00000134970	17828	AC008549.2	ENSG00000249021	36478	None	None
HERVL_5q22.3	HERV	HERVL	prototype	chr5	115724655	115731535	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008549.1	ENSG00000248709	7443	AC008549.2	ENSG00000249021	32488	None	None
ERV316A3_5q23.1a	HERV	ERV316A3	oneside	chr5	115921469	115926292	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP3S1	ENSG00000177879	7388	LINCADL	ENSG00000287148	30279	None	None
MER61_5q23.1	HERV	MER61	prototype	chr5	116343832	116348871	-	noncoding	COMMD10	protein_coding	ANTISENSE	ENSG00000145781	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5q23.1	HERV	ERVLB4	oneside	chr5	116353049	116354521	+	noncoding	COMMD10	protein_coding	SENSE	ENSG00000145781	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q23.1b	HERV	ERV316A3	oneside	chr5	116627992	116630268	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SEMA6A-AS2	ENSG00000249167	16792	RPS17P2	ENSG00000197575	85975	None	None
HARLEQUIN_5q23.1	HERV	HARLEQUIN	prototype	chr5	116704677	116709645	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SEMA6A-AS2	ENSG00000249167	93477	RPS17P2	ENSG00000197575	6598	None	None
MER41_5q23.1a	HERV	MER41	oneside	chr5	117003806	117006003	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093534.1	ENSG00000250650	13545	AC010267.1	ENSG00000249150	173436	None	None
HERVH_5q23.1a	HERV	HERVH	prototype	chr5	117046415	117052246	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL35AP15	ENSG00000243758	248858	AC093534.2	ENSG00000250949	7846	chr5:117048423-117048628	None
ERVLE_5q23.1a	HERV	ERVLE	internal	chr5	117100212	117102343	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093534.2	ENSG00000250949	61643	RPL35AP15	ENSG00000243758	198761	None	None
ERV316A3_5q23.1c	HERV	ERV316A3	oneside	chr5	117181390	117185208	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL35AP15	ENSG00000243758	115896	AC093534.2	ENSG00000250949	142821	None	None
ERV316A3_5q23.1d	HERV	ERV316A3	prototype	chr5	117326284	117332767	+	noncoding	AC093295.1	lncRNA	SENSE	ENSG00000285809	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q23.1e	HERV	ERV316A3	internal	chr5	117569017	117570560	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114322.1	ENSG00000251477	148680	LINC00992	ENSG00000248663	22719	None	None
ERV316A3_5q23.1f	HERV	ERV316A3	internal	chr5	118305737	118307313	-	noncoding	LINC02208	lncRNA	SENSE	ENSG00000250891	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5q23.1a	HERV	HERVL	prototype	chr5	118566981	118570739	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02208	ENSG00000250891	4782	LINC02216	ENSG00000249551	4836	None	None
ERVLE_5q23.1b	HERV	ERVLE	internal	chr5	118831656	118832807	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093206.1	ENSG00000249426	46197	DTWD2	ENSG00000169570	3267	None	None
HERVH_5q23.1b	HERV	HERVH	oneside	chr5	118948123	118952646	-	noncoding	DTWD2	protein_coding	SENSE	ENSG00000169570	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:118952284-118952595	None
MER41_5q23.1b	HERV	MER41	prototype	chr5	118994667	119001695	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008629.1	ENSG00000249494	4652	DTWD2	ENSG00000169570	6120	None	None
HERVIP10FH_5q23.1a	HERV	HERVIP10FH	internal	chr5	119435608	119439169	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TNFAIP8	ENSG00000145779	35920	RNA5SP190	ENSG00000202092	6547	None	None
HERVIP10FH_5q23.1b	HERV	HERVIP10FH	internal	chr5	119446130	119447266	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP190	ENSG00000202092	297	HSD17B4	ENSG00000133835	5207	None	None
HERVIP10F_5q23.1	HERV	HERVIP10F	oneside	chr5	119447316	119449308	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP190	ENSG00000202092	1483	HSD17B4	ENSG00000133835	3165	None	None
ERVLE_5q23.1c	HERV	ERVLE	internal	chr5	119938843	119940007	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008574.1	ENSG00000251293	305441	AC008550.1	ENSG00000234259	257763	None	None
ERV316A3_5q23.1g	HERV	ERV316A3	oneside	chr5	119995361	119997408	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008574.1	ENSG00000251293	248040	AC008550.1	ENSG00000234259	314281	None	None
HERVL_5q23.1b	HERV	HERVL	prototype	chr5	120209518	120216569	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008574.1	ENSG00000251293	28879	AC008550.1	ENSG00000234259	528438	None	None
ERV316A3_5q23.1h	HERV	ERV316A3	oneside	chr5	120449148	120450529	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113418.1	ENSG00000261036	38179	PRR16	ENSG00000184838	13771	None	None
HERVH_5q23.1c	HERV	HERVH	prototype	chr5	120697546	120703411	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU4-69P	ENSG00000222609	7287	PRR16	ENSG00000184838	10214	None	chr5:120698413-120698419,chr5:120699660-120699671
MER101_5q23.1	HERV	MER101	oneside	chr5	120946720	120948515	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008565.1	ENSG00000251135	91575	AC114284.1	ENSG00000248927	155942	None	None
HERVL40_5q23.1	HERV	HERVL40	oneside	chr5	121413941	121416582	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL23AP44	ENSG00000244088	159266	AC008568.2	ENSG00000279860	48627	None	None
HERVL_5q23.1c	HERV	HERVL	prototype	chr5	121542884	121544611	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008568.2	ENSG00000279860	177570	RPL23AP44	ENSG00000244088	31237	None	None
ERV316A3_5q23.1i	HERV	ERV316A3	internal	chr5	121792454	121793187	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC106806.2	ENSG00000249600	120582	FTMT	ENSG00000181867	58695	None	None
HML3_5q23.1	HERV	HML3	oneside	chr5	121856818	121860940	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SRFBP1	ENSG00000151304	101035	FTMT	ENSG00000181867	3985	None	None
HERVH_5q23.2a	HERV	HERVH	prototype	chr5	122474226	122478846	-	noncoding	AC022101.1	lncRNA	SENSE	ENSG00000250328	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_5q23.2b	HERV	HERVH	prototype	chr5	122616893	122624374	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02201	ENSG00000251538	4578	AC022101.1	ENSG00000250328	137806	None	None
ERV316A3_5q23.2a	HERV	ERV316A3	internal	chr5	122652871	122653322	-	noncoding	LINC02201	lncRNA	SENSE	ENSG00000251538	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5q23.2a	HERV	ERVLB4	prototype	chr5	122865124	122868901	-	noncoding	SNX24	protein_coding	ANTISENSE	ENSG00000064652	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5q23.2a	HERV	HERVL	oneside	chr5	122970923	122975074	-	noncoding	SNX24	protein_coding	ANTISENSE	ENSG00000064652	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q23.2a	HERV	ERVLE	internal	chr5	123477474	123481437	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026422.1	ENSG00000279772	27299	HMGB3P17	ENSG00000249400	8045	None	None
HUERSP3B_5q23.2a	HERV	HUERSP3B	internal	chr5	123926169	123930099	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01170	ENSG00000253807	129695	KRT18P16	ENSG00000235275	288766	None	None
HUERSP3B_5q23.2b	HERV	HUERSP3B	oneside	chr5	123935870	123938703	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01170	ENSG00000253807	121091	KRT18P16	ENSG00000235275	298467	None	None
ERVLB4_5q23.2b	HERV	ERVLB4	prototype	chr5	124063528	124069473	-	noncoding	LINC01170	lncRNA	SENSE	ENSG00000253807	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_5q23.2c	HERV	HERVH	prototype	chr5	124303758	124309476	+	noncoding	LINC01170	lncRNA	ANTISENSE	ENSG00000253807	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_5q23.2d	HERV	HERVH	prototype	chr5	124497035	124502739	+	noncoding	AC025465.1	lncRNA	ANTISENSE	ENSG00000248296	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:124497338-124497342
ERV316A3_5q23.2b	HERV	ERV316A3	prototype	chr5	124927966	124933483	-	noncoding	LINC02240	lncRNA	ANTISENSE	ENSG00000260192	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_5q23.2a	HERV	MER61	oneside	chr5	124962835	124967101	+	noncoding	LINC02240	lncRNA	SENSE	ENSG00000260192	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:124962964-124962979,chr5:124963044-124963048
HERVH_5q23.2e	HERV	HERVH	prototype	chr5	124966686	124972226	-	noncoding	LINC02240	lncRNA	ANTISENSE	ENSG00000260192	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_5q23.2b	HERV	MER61	oneside	chr5	124972227	124973331	+	noncoding	LINC02240	lncRNA	SENSE	ENSG00000260192	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q23.2b	HERV	ERVLE	internal	chr5	125587739	125591204	-	noncoding	LINC02240,AC116362.1,AC116362.2	lncRNA,lncRNA,lncRNA	ANTISENSE,SENSE,ANTISENSE	ENSG00000260192,ENSG00000248752,ENSG00000286111	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q23.2c	HERV	ERV316A3	internal	chr5	125597434	125598169	-	noncoding	LINC02240,AC116362.1,AC116362.2	lncRNA,lncRNA,lncRNA	ANTISENSE,SENSE,ANTISENSE	ENSG00000260192,ENSG00000248752,ENSG00000286111	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH19_5q23.2	HERV	HERVFH19	oneside	chr5	125663209	125667746	-	noncoding	AC116362.1	lncRNA	SENSE	ENSG00000248752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5q23.2c	HERV	ERVLB4	internal	chr5	125674136	125680595	+	noncoding	AC116362.1	lncRNA	ANTISENSE	ENSG00000248752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_5q23.2a	HERV	HERVP71A	oneside	chr5	125914556	125918390	+	noncoding	AC116362.1	lncRNA	ANTISENSE	ENSG00000248752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_5q23.2b	HERV	HERVP71A	oneside	chr5	125924565	125929175	+	noncoding	AC116362.1	lncRNA	ANTISENSE	ENSG00000248752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q23.2d	HERV	ERV316A3	oneside	chr5	125959336	125961742	+	noncoding	AC116362.1	lncRNA	ANTISENSE	ENSG00000248752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q23.2c	HERV	ERVLE	internal	chr5	126104338	126107673	+	noncoding	AC116362.1	lncRNA	ANTISENSE	ENSG00000248752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_5q23.2	HERV	HERV9	prototype	chr5	126220748	126230219	+	noncoding	AC116362.1	lncRNA	ANTISENSE	ENSG00000248752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5q23.2d	HERV	ERVLB4	internal	chr5	126500832	126502841	-	noncoding	AC093535.1	lncRNA	SENSE	ENSG00000250602	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_5q23.2f	HERV	HERVH	prototype	chr5	126667096	126675066	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSPE1P10	ENSG00000249768	62372	BOLA3P3	ENSG00000213630	3528	None	None
ERV316A3_5q23.2e	HERV	ERV316A3	oneside	chr5	126676843	126680468	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BOLA3P3	ENSG00000213630	13275	HSPE1P10	ENSG00000249768	56970	chr5:126680235-126680634	None
HERVH_5q23.2g	HERV	HERVH	prototype	chr5	126839337	126845705	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MARCHF3	ENSG00000173926	22009	LMNB1	ENSG00000113368	2317	None	None
ERV316A3_5q23.2f	HERV	ERV316A3	oneside	chr5	127114902	127123399	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005915.1	ENSG00000279446	39298	MRPS5P3	ENSG00000214743	19683	None	None
HERVL_5q23.2b	HERV	HERVL	prototype	chr5	127673990	127680496	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC022118.1	ENSG00000248799	9961	CCDC192	ENSG00000230561	22893	None	None
ERV316A3_5q23.2g	HERV	ERV316A3	internal	chr5	127852336	127853268	-	noncoding	CCDC192,AC068658.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000230561,ENSG00000250603	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_5q23.3	HERV	HML6	prototype	chr5	128221540	128223733	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FBN2	ENSG00000138829	34176	SLC12A2	ENSG00000064651	31863	None	None
ERVLE_5q23.3a	HERV	ERVLE	internal	chr5	128597162	128600155	-	noncoding	FBN2,SLC27A6	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000138829,ENSG00000113396	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5q23.3	HERV	HERVL	prototype	chr5	128630773	128635906	-	noncoding	FBN2,SLC27A6	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000138829,ENSG00000113396	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_5q23.3a	HERV	ERVL	oneside	chr5	128665724	128668828	-	noncoding	SLC27A6,AC008588.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000113396,ENSG00000248634	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_5q23.3	HERV	HERVH	oneside	chr5	128731345	128735997	+	noncoding	SLC27A6,AC008588.1	protein_coding,lncRNA	SENSE,SENSE	ENSG00000113396,ENSG00000248634	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_5q23.3b	HERV	ERVL	oneside	chr5	129046158	129050595	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ISOC1	ENSG00000066583	44154	SLC27A6	ENSG00000113396	12516	None	None
ERV316A3_5q23.3a	HERV	ERV316A3	internal	chr5	129088928	129090254	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ISOC1	ENSG00000066583	4495	SLC27A6	ENSG00000113396	55286	None	None
ERVLE_5q23.3b	HERV	ERVLE	internal	chr5	129217483	129220410	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008679.1	ENSG00000286274	44226	MIR4460	ENSG00000265691	176652	None	None
ERVLE_5q23.3c	HERV	ERVLE	internal	chr5	129277463	129278733	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008679.1	ENSG00000286274	104206	MIR4460	ENSG00000265691	118329	None	None
ERVLE_5q23.3d	HERV	ERVLE	internal	chr5	129307464	129309200	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4460	ENSG00000265691	87862	AC008679.1	ENSG00000286274	134207	None	None
HERVL40_5q23.3	HERV	HERVL40	internal	chr5	129396105	129397080	-	noncoding	MIR4460	miRNA	SENSE	ENSG00000265691	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q23.3b	HERV	ERV316A3	internal	chr5	129439362	129441828	+	noncoding	ADAMTS19-AS1	lncRNA	ANTISENSE	ENSG00000249421	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:129440609-129440634
ERVLE_5q23.3e	HERV	ERVLE	internal	chr5	129446684	129448391	-	noncoding	ADAMTS19-AS1	lncRNA	SENSE	ENSG00000249421	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5q23.3	HERV	ERVLB4	internal	chr5	129738869	129743898	-	noncoding	AC008591.1	lncRNA	SENSE	ENSG00000251680	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q23.3f	HERV	ERVLE	oneside	chr5	129807232	129809069	+	noncoding	AC008591.1	lncRNA	ANTISENSE	ENSG00000251680	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q23.3c	HERV	ERV316A3	oneside	chr5	129856923	129861613	+	noncoding	AC008591.1	lncRNA	ANTISENSE	ENSG00000251680	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q23.3g	HERV	ERVLE	internal	chr5	130212683	130215843	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CHSY3	ENSG00000198108	26049	RNU7-53P	ENSG00000252514	170778	None	None
ERVLE_5q23.3h	HERV	ERVLE	internal	chr5	130299867	130301538	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CHSY3	ENSG00000198108	113233	RNU7-53P	ENSG00000252514	85083	None	None
ERVLE_5q23.3i	HERV	ERVLE	internal	chr5	130355285	130357115	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CHSY3	ENSG00000198108	168651	RNU7-53P	ENSG00000252514	29506	None	None
HERVP71A_5q23.3	HERV	HERVP71A	oneside	chr5	130542959	130550117	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005741.1	ENSG00000249418	48231	ARL2BPP4	ENSG00000249312	13070	None	None
HERV9_5q23.3	HERV	HERV9	prototype	chr5	130633383	130642483	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005741.1	ENSG00000249418	34604	AC006525.1	ENSG00000287390	12900	None	None
ERV316A3_5q23.3d	HERV	ERV316A3	oneside	chr5	131064049	131065413	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HINT1	ENSG00000169567	93614	AC113367.2	ENSG00000248955	55307	None	None
ERVLE_5q31.1a	HERV	ERVLE	internal	chr5	131225382	131226891	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LYRM7	ENSG00000186687	19954	CDC42SE2	ENSG00000158985	18602	None	None
HERVH_5q31.1a	HERV	HERVH	prototype	chr5	131571880	131582180	+	noncoding	RAPGEF6,AC008695.1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000158987,ENSG00000273217	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q31.1a	HERV	ERV316A3	oneside	chr5	131606973	131611288	+	noncoding	RAPGEF6,AC008695.1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000158987,ENSG00000273217	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5q31.1	HERV	ERVLB4	oneside	chr5	131812471	131817329	+	noncoding	MEIKIN,AC034228.3	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000239642,ENSG00000281938	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_5q31.1	HERV	LTR57	prototype	chr5	132281240	132287803	-	noncoding	P4HA2	protein_coding	SENSE	ENSG00000072682	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q31.1b	HERV	ERVLE	internal	chr5	132288665	132289427	+	noncoding	P4HA2	protein_coding	ANTISENSE	ENSG00000072682	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q31.1c	HERV	ERVLE	internal	chr5	132289440	132292324	+	noncoding	P4HA2	protein_coding	ANTISENSE	ENSG00000072682	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q31.1d	HERV	ERVLE	internal	chr5	132535254	132537474	+	noncoding	AC116366.3	protein_coding	SENSE	ENSG00000283782	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q31.1e	HERV	ERVLE	internal	chr5	133774649	133775920	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005178.1	ENSG00000251243	53715	WSPAR	ENSG00000249073	137757	None	None
ERVLE_5q31.1f	HERV	ERVLE	internal	chr5	133939624	133941351	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C5orf15	ENSG00000113583	14159	WSPAR	ENSG00000249073	22355	None	None
ERV316A3_5q31.1b	HERV	ERV316A3	prototype	chr5	134273494	134276817	-	noncoding	AC104109.4	lncRNA	SENSE	ENSG00000273345	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q31.1g	HERV	ERVLE	internal	chr5	135651743	135653623	+	noncoding	SLC25A48,SLC25A48-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000145832,ENSG00000251045	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_5q31.1b	HERV	HERVH	prototype	chr5	135730999	135737486	-	noncoding	SLC25A48	protein_coding	ANTISENSE	ENSG00000145832	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:135737189-135737194
ERVLE_5q31.1h	HERV	ERVLE	internal	chr5	135949352	135950116	-	noncoding	LECT2,FBXL21P	protein_coding,transcribed_unitary_pseudogene	SENSE,ANTISENSE	ENSG00000145826,ENSG00000164616	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_5q31.1c	HERV	HERVH	prototype	chr5	136301374	136307022	+	noncoding	TRPC7,TRPC7-AS2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000069018,ENSG00000250947	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q31.1c	HERV	ERV316A3	prototype	chr5	136369855	136375660	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRPC7	ENSG00000069018	4310	AC063980.1	ENSG00000279240	688	None	None
HERVH_5q31.1d	HERV	HERVH	prototype	chr5	136540943	136545393	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC109439.2	ENSG00000250284	189437	AC112178.1	ENSG00000249803	19511	None	chr5:136544859-136544894,chr5:136545191-136545200
HERVH_5q31.1e	HERV	HERVH	oneside	chr5	136546331	136550739	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC109439.2	ENSG00000250284	184091	AC112178.1	ENSG00000249803	24899	chr5:136549855-136549911	None
HERVH_5q31.1f	HERV	HERVH	prototype	chr5	136565340	136571245	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC109439.2	ENSG00000250284	163585	AC112178.1	ENSG00000249803	43908	None	None
MER101_5q31.1	HERV	MER101	oneside	chr5	136692767	136695215	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC109439.2	ENSG00000250284	39615	AC112178.1	ENSG00000249803	171335	None	None
HERVH_5q31.1g	HERV	HERVH	prototype	chr5	136737043	136739624	+	noncoding	AC109439.2	lncRNA	SENSE	ENSG00000250284	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q31.2	HERV	ERV316A3	oneside	chr5	137510649	137511524	-	noncoding	SPOCK1	protein_coding	SENSE	ENSG00000152377	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_5q31.2	HERV	HERV9	prototype	chr5	139502943	139512402	+	noncoding	AC010378.2	lncRNA	SENSE	ENSG00000286403	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:139503240-139503246
HARLEQUIN_5q31.2	HERV	HARLEQUIN	prototype	chr5	139525866	139531564	+	coding	UBE2D2	protein_coding	SENSE	ENSG00000131508	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:139526237-139526242,chr5:139528936-139528957
MER41_5q31.3a	HERV	MER41	oneside	chr5	140626288	140628416	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CD14	ENSG00000170458	3312	AC116353.2	ENSG00000240518	16888	None	None
MER41_5q31.3b	HERV	MER41	oneside	chr5	140744065	140745704	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC116353.3	ENSG00000248106	18406	AC116353.4	ENSG00000250515	11202	None	None
HERVL_5q31.3a	HERV	HERVL	oneside	chr5	140905775	140910008	-	noncoding	PCDHA1,PCDHA2,PCDHA3,PCDHA4,PCDHA5,PCDHA6,PCDHA7,PCDHA8,PCDHA9,PCDHA10,PCDHA11,PCDHA12,PCDHA13	protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000204970,ENSG00000204969,ENSG00000255408,ENSG00000204967,ENSG00000204965,ENSG00000081842,ENSG00000204963,ENSG00000204962,ENSG00000204961,ENSG00000250120,ENSG00000249158,ENSG00000251664,ENSG00000239389	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5q31.3b	HERV	HERVL	oneside	chr5	140910078	140912336	-	noncoding	PCDHA1,PCDHA2,PCDHA3,PCDHA4,PCDHA5,PCDHA6,PCDHA7,PCDHA8,PCDHA9,PCDHA10,PCDHA11,PCDHA12,PCDHA13	protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000204970,ENSG00000204969,ENSG00000255408,ENSG00000204967,ENSG00000204965,ENSG00000081842,ENSG00000204963,ENSG00000204962,ENSG00000204961,ENSG00000250120,ENSG00000249158,ENSG00000251664,ENSG00000239389	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q31.3a	HERV	ERVLE	internal	chr5	141264023	141265504	-	noncoding	TAF7	protein_coding	SENSE	ENSG00000178913	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q31.3b	HERV	ERVLE	internal	chr5	141266733	141269951	+	noncoding	TAF7	protein_coding	ANTISENSE	ENSG00000178913	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:141268585-141268830	None
ERV316A3_5q31.3a	HERV	ERV316A3	oneside	chr5	141272549	141274064	+	noncoding	TAF7	protein_coding	ANTISENSE	ENSG00000178913	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q31.3b	HERV	ERV316A3	oneside	chr5	141275576	141280667	+	noncoding	TAF7	protein_coding	ANTISENSE	ENSG00000178913	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q31.3c	HERV	ERVLE	internal	chr5	141280670	141282711	+	noncoding	TAF7	protein_coding	ANTISENSE	ENSG00000178913	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q31.3d	HERV	ERVLE	internal	chr5	141290142	141293463	+	noncoding	TAF7	protein_coding	ANTISENSE	ENSG00000178913	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_5q31.3	HERV	HUERSP3B	prototype	chr5	141455328	141458438	-	noncoding	PCDHGA1,PCDHGA2,PCDHGA3,PCDHGB1,PCDHGA4,PCDHGB2,PCDHGA5,PCDHGB3,PCDHGA6,PCDHGA7,PCDHGB4,PCDHGA8,PCDHGB5,PCDHGA9,PCDHGB6,PCDHGA10,PCDHGB7,PCDHGA11,PCDHGA12	protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000204956,ENSG00000081853,ENSG00000254245,ENSG00000254221,ENSG00000262576,ENSG00000253910,ENSG00000253485,ENSG00000262209,ENSG00000253731,ENSG00000253537,ENSG00000253953,ENSG00000253767,ENSG00000276547,ENSG00000261934,ENSG00000253305,ENSG00000253846,ENSG00000254122,ENSG00000253873,ENSG00000253159	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q31.3e	HERV	ERVLE	internal	chr5	141689703	141691521	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005753.2	ENSG00000286736	27190	ARAP3	ENSG00000120318	7473	None	None
ERV316A3_5q31.3c	HERV	ERV316A3	prototype	chr5	142727807	142735305	-	noncoding	LINC01844,AC005592.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000236714,ENSG00000287203	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:142734839-142734840
HERVIP10FH_5q31.3	HERV	HERVIP10FH	prototype	chr5	143088591	143095011	-	noncoding	ARHGAP26	protein_coding	ANTISENSE	ENSG00000145819	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_5q31.3a	HERV	HERVH	oneside	chr5	143924996	143926207	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL87P	ENSG00000239390	214672	AC008696.2	ENSG00000249881	96224	None	None
HERVH_5q31.3b	HERV	HERVH	prototype	chr5	144611352	144616900	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC132803.1	ENSG00000251031	239990	RN7SKP246	ENSG00000201423	75682	None	None
ERV316A3_5q31.3d	HERV	ERV316A3	oneside	chr5	144840839	144843864	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC132803.1	ENSG00000251031	13026	RN7SKP246	ENSG00000201423	305169	None	None
HERV9_5q31.3	HERV	HERV9	oneside	chr5	144846698	144851536	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC132803.1	ENSG00000251031	5354	RN7SKP246	ENSG00000201423	311028	None	None
ERVLE_5q31.3f	HERV	ERVLE	internal	chr5	145067129	145070186	+	noncoding	AC132803.1	lncRNA	ANTISENSE	ENSG00000251031	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_5q32	HERV	HERVIP10FH	prototype	chr5	147254447	147261673	-	noncoding	STK32A	protein_coding	ANTISENSE	ENSG00000169302	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q32	HERV	ERV316A3	internal	chr5	147460752	147464826	+	noncoding	DPYSL3	protein_coding	ANTISENSE	ENSG00000113657	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_5q32	HERV	MER41	oneside	chr5	147724857	147729086	+	noncoding	JAKMIP2,AC011370.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000176049,ENSG00000287630	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q32	HERV	ERVLE	internal	chr5	147805029	147808303	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPINK1	ENSG00000164266	16265	JAKMIP2	ENSG00000176049	22254	None	chr5:147805292-147805300,chr5:147805302-147805325,chr5:147805378-147805388,chr5:147805048-147805055
HERVH_5q32a	HERV	HERVH	oneside	chr5	147864645	147869038	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011352.2	ENSG00000249518	11986	SCGB3A2	ENSG00000164265	1644	None	None
HERVH_5q32b	HERV	HERVH	prototype	chr5	147869836	147874526	-	noncoding	SCGB3A2	protein_coding	ANTISENSE	ENSG00000164265	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chr5:147874319-147874515	chr5:147872245-147872280,chr5:147874325-147874331,chr5:147872134-147872175
MER61_5q32	HERV	MER61	prototype	chr5	148001641	148006661	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EEF1GP2	ENSG00000250346	78220	SPINK5	ENSG00000133710	19022	None	None
HERVIP10FH_5q33.1	HERV	HERVIP10FH	oneside	chr5	150833151	150837862	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IRGM	ENSG00000237693	8661	SMIM3	ENSG00000256235	36417	None	None
MER4_5q33.1a	HERV	MER4	oneside	chr5	150870228	150872215	+	noncoding	IRGM	protein_coding	SENSE	ENSG00000237693	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5q33.1a	HERV	HERVL	oneside	chr5	150872210	150877598	+	noncoding	IRGM	protein_coding	SENSE	ENSG00000237693	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_5q33.1	HERV	HML5	prototype	chr5	150914264	150916360	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF300P1	ENSG00000197083	14285	ZNF300	ENSG00000145908	9281	None	None
MER4_5q33.1b	HERV	MER4	oneside	chr5	150957659	150964107	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022106.1	ENSG00000274235	5199	AC022106.2	ENSG00000277866	14312	None	None
LTR46_5q33.1	HERV	LTR46	prototype	chr5	150986467	150993656	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GPX3	ENSG00000211445	26782	AC022106.2	ENSG00000277866	7292	None	chr5:150992714-150992718
HERV4_5q33.1	HERV	HERV4	prototype	chr5	151245104	151251626	-	noncoding	GM2A	protein_coding	ANTISENSE	ENSG00000196743	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:151245638-151245654,chr5:151251098-151251419	chr5:151251179-151251188
ERV316A3_5q33.1	HERV	ERV316A3	internal	chr5	152504339	152506682	-	noncoding	AC008571.2	lncRNA	ANTISENSE	ENSG00000286749	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_5q33.1b	HERV	HERVL	oneside	chr5	152624006	152625743	+	noncoding	AC008571.2,LINC01470	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000286749,ENSG00000249484	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_5q33.2	HERV	HERVH	prototype	chr5	153449687	153455430	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRIA1	ENSG00000155511	34185	LINC01470	ENSG00000249484	226144	None	None
MER41_5q33.2	HERV	MER41	oneside	chr5	153463637	153465626	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRIA1	ENSG00000155511	23989	LINC01470	ENSG00000249484	240094	None	None
HML2_5q33.2	HERV	HML2	prototype	chr5	154635953	154644655	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1303	ENSG00000221552	41121	MIR3141	ENSG00000264760	39881	None	None
ERV316A3_5q33.2a	HERV	ERV316A3	internal	chr5	155336711	155339111	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010476.2	ENSG00000287963	137459	AC010591.1	ENSG00000271477	58180	None	None
HUERSP2_5q33.2	HERV	HUERSP2	oneside	chr5	155677990	155680224	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008725.1	ENSG00000270442	184392	RNA5SP199	ENSG00000200275	165213	None	None
ERV316A3_5q33.2b	HERV	ERV316A3	oneside	chr5	155692775	155695965	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP199	ENSG00000200275	149472	AC008725.1	ENSG00000270442	199177	None	None
ERVLE_5q33.2	HERV	ERVLE	internal	chr5	155696194	155700296	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008725.1	ENSG00000270442	202596	RNA5SP199	ENSG00000200275	145141	None	None
PABLB_5q33.2	HERV	PABLB	internal	chr5	156086902	156094084	-	noncoding	SGCD	protein_coding	ANTISENSE	ENSG00000170624	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_5q33.3	HERV	HML2	prototype	chr5	156657706	156666885	-	coding	SGCD	protein_coding	ANTISENSE	ENSG00000170624	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_5q33.3	HERV	PABLA	internal	chr5	157655243	157658753	+	noncoding	SOX30	protein_coding	ANTISENSE	ENSG00000039600	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:157655809-157655938	None
MER41_5q33.3	HERV	MER41	oneside	chr5	157695038	157699482	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008694.1	ENSG00000253798	4160	THG1L	ENSG00000113272	31938	None	None
HUERSP3B_5q33.3	HERV	HUERSP3B	internal	chr5	157727177	157729573	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	THG1L	ENSG00000113272	1847	AC008694.1	ENSG00000253798	36299	None	None
HERVL_5q33.3	HERV	HERVL	prototype	chr5	159233488	159238427	-	noncoding	AC134043.2,LINC01932	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000253256,ENSG00000253315	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_5q33.3	HERV	HARLEQUIN	prototype	chr5	159366192	159373869	+	coding	AC008691.1	lncRNA	SENSE	ENSG00000249738	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q33.3	HERV	ERVLE	internal	chr5	160380230	160387013	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C1QTNF2	ENSG00000145861	9589	ZBED8	ENSG00000221886	6135	None	None
HERVL18_5q34	HERV	HERVL18	prototype	chr5	160932110	160938828	-	noncoding	LINC02159	lncRNA	SENSE	ENSG00000253417	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:160938580-160938591,chr5:160938594-160938618,chr5:160938541-160938547
MER41_5q34	HERV	MER41	prototype	chr5	160979953	160984224	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02159	ENSG00000253417	41327	GABRB2	ENSG00000145864	304205	None	None
HERVL_5q34a	HERV	HERVL	prototype	chr5	160990223	160999275	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02159	ENSG00000253417	51597	GABRB2	ENSG00000145864	289154	None	None
ERVL_5q34	HERV	ERVL	oneside	chr5	161054469	161061541	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GABRB2	ENSG00000145864	226888	LINC02159	ENSG00000253417	115843	None	None
HERVH_5q34a	HERV	HERVH	prototype	chr5	161240264	161246200	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02159	ENSG00000253417	301638	GABRB2	ENSG00000145864	42229	None	None
HERVH_5q34b	HERV	HERVH	prototype	chr5	161248409	161255013	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02159	ENSG00000253417	309783	GABRB2	ENSG00000145864	33416	None	None
HERVL_5q34b	HERV	HERVL	oneside	chr5	162029523	162030822	+	noncoding	GABRG2	protein_coding	SENSE	ENSG00000113327	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5q34a	HERV	ERVLB4	internal	chr5	162047458	162048316	-	noncoding	GABRG2	protein_coding	ANTISENSE	ENSG00000113327	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_5q34c	HERV	HERVH	prototype	chr5	162275428	162281160	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113414.1	ENSG00000254186	142882	GABRG2	ENSG00000113327	112451	chr5:162280004-162280194	None
LTR19_5q34	HERV	LTR19	oneside	chr5	162717489	162719264	+	noncoding	AC113414.1	lncRNA	ANTISENSE	ENSG00000254186	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_5q34	HERV	MER34B	oneside	chr5	163055779	163057034	+	noncoding	AC113414.1	lncRNA	ANTISENSE	ENSG00000254186	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:163056978-163056993	None
ERV316A3_5q34a	HERV	ERV316A3	oneside	chr5	163229546	163231206	-	noncoding	AC113414.1	lncRNA	SENSE	ENSG00000254186	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_5q34a	HERV	HARLEQUIN	oneside	chr5	163313040	163314543	-	noncoding	AC113414.1	lncRNA	SENSE	ENSG00000254186	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_5q34b	HERV	HARLEQUIN	oneside	chr5	163314691	163319478	-	coding	AC113414.1	lncRNA	SENSE	ENSG00000254186	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:163315830-163315839
HERVH_5q34d	HERV	HERVH	prototype	chr5	163334360	163340585	+	noncoding	AC113414.1	lncRNA	ANTISENSE	ENSG00000254186	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5q34b	HERV	ERVLB4	oneside	chr5	163492467	163497378	-	noncoding	HMMR-AS1	lncRNA	SENSE	ENSG00000251018	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5q34c	HERV	ERVLB4	oneside	chr5	163684855	163685963	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC116917.1	ENSG00000224012	23247	AC010291.1	ENSG00000285590	72339	None	None
HERVL_5q34c	HERV	HERVL	prototype	chr5	164827238	164831132	+	noncoding	AC109466.1	lncRNA	SENSE	ENSG00000241956	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_5q34	HERV	LTR25	internal	chr5	164968815	164973617	-	coding	AC109466.1	lncRNA	ANTISENSE	ENSG00000241956	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5q34d	HERV	ERVLB4	prototype	chr5	165240383	165243009	-	noncoding	LINC01938	lncRNA	SENSE	ENSG00000254066	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q34a	HERV	ERVLE	internal	chr5	165638116	165639177	-	noncoding	AC008415.1	lncRNA	ANTISENSE	ENSG00000253693	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_5q34	HERV	HERV9	internal	chr5	166128456	166130714	-	noncoding	AC114321.1	lncRNA	ANTISENSE	ENSG00000254171	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVFH21_5q34	HERV	HERVFH21	oneside	chr5	166130808	166136205	-	noncoding	AC114321.1	lncRNA	ANTISENSE	ENSG00000254171	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr5:166132608-166132837	None
ERVLE_5q34b	HERV	ERVLE	internal	chr5	166578553	166581164	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01947	ENSG00000254130	324058	AC026403.1	ENSG00000229119	195954	None	None
HERVH_5q34e	HERV	HERVH	prototype	chr5	166740058	166744650	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01947	ENSG00000254130	160572	AC026403.1	ENSG00000229119	357459	None	None
HERVH_5q34f	HERV	HERVH	prototype	chr5	167297631	167303678	-	noncoding	TENM2,AC091820.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000145934,ENSG00000254297	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q34b	HERV	ERV316A3	oneside	chr5	168605545	168606894	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL10P9	ENSG00000233913	9458	PANK3	ENSG00000120137	26177	None	None
HERVL_5q35.1	HERV	HERVL	prototype	chr5	169444070	169446842	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLIT3	ENSG00000184347	142941	RNU6-477P	ENSG00000206614	105607	None	None
ERVLE_5q35.1a	HERV	ERVLE	internal	chr5	170087506	170094095	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FOXI1	ENSG00000168269	11802	DOCK2	ENSG00000134516	4124	None	None
HERVH_5q35.1a	HERV	HERVH	prototype	chr5	170762081	170767864	-	noncoding	AC008514.1,GABRP	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000253348,ENSG00000094755	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:170767556-170767560
HERVH_5q35.1b	HERV	HERVH	prototype	chr5	171000577	171008846	-	noncoding	RANBP17	protein_coding	ANTISENSE	ENSG00000204764	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_5q35.1	HERV	MER41	oneside	chr5	171054228	171057279	-	noncoding	RANBP17	protein_coding	ANTISENSE	ENSG00000204764	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q35.1b	HERV	ERVLE	internal	chr5	171354413	171355749	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL339P	ENSG00000265740	3368	AC091980.1	ENSG00000213393	8783	None	None
ERV316A3_5q35.1a	HERV	ERV316A3	internal	chr5	171356741	171358489	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091980.1	ENSG00000213393	11111	RN7SL339P	ENSG00000265740	628	None	None
ERV316A3_5q35.1b	HERV	ERV316A3	internal	chr5	171506316	171507219	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022440.1	ENSG00000285914	217356	FGF18	ENSG00000156427	48690	None	None
MER34B_5q35.1	HERV	MER34B	internal	chr5	172296577	172300853	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SH3PXD2B	ENSG00000174705	24147	UBTD2	ENSG00000168246	12813	None	None
HERVK11_5q35.1	HERV	HERVK11	prototype	chr5	172396989	172402672	+	noncoding	SH3PXD2B	protein_coding	ANTISENSE	ENSG00000174705	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_5q35.1	HERV	HERVIP10FH	prototype	chr5	172650610	172656348	-	noncoding	NEURL1B	protein_coding	ANTISENSE	ENSG00000214357	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q35.2a	HERV	ERV316A3	oneside	chr5	174006800	174009108	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C5orf47	ENSG00000185056	660	RPL12P22	ENSG00000253109	30643	None	None
MER4_5q35.2a	HERV	MER4	internal	chr5	174472059	174472887	-	noncoding	LINC01411	lncRNA	ANTISENSE	ENSG00000249306	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5q35.2	HERV	ERVLE	internal	chr5	174853163	174857212	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113346.2	ENSG00000251670	2438	LINC01951	ENSG00000204754	61870	chr5:174854559-174854927	None
MER41_5q35.2	HERV	MER41	internal	chr5	174892005	174894316	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113346.2	ENSG00000251670	41280	LINC01951	ENSG00000204754	24766	None	None
MER101_5q35.2a	HERV	MER101	internal	chr5	175065166	175066051	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01951	ENSG00000204754	69653	ARL2BPP6	ENSG00000248355	224680	None	None
MER101_5q35.2b	HERV	MER101	internal	chr5	175075920	175077628	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01951	ENSG00000204754	80407	ARL2BPP6	ENSG00000248355	213103	None	None
MER101_5q35.2c	HERV	MER101	internal	chr5	175077892	175078491	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01951	ENSG00000204754	82379	ARL2BPP6	ENSG00000248355	212240	None	None
MER4B_5q35.2	HERV	MER4B	internal	chr5	175107278	175108665	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARL2BPP6	ENSG00000248355	182066	LINC01951	ENSG00000204754	111765	None	None
HERVL18_5q35.2	HERV	HERVL18	prototype	chr5	175363480	175364722	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARL2BPP6	ENSG00000248355	72228	DRD1	ENSG00000184845	75314	None	None
MER34B_5q35.2	HERV	MER34B	internal	chr5	175559617	175565066	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SFXN1	ENSG00000164466	29875	RN7SKP148	ENSG00000222111	63122	None	None
ERV316A3_5q35.2b	HERV	ERV316A3	prototype	chr5	175901724	175907757	+	noncoding	AC138965.3,AC138965.2	TEC,lncRNA	ANTISENSE,ANTISENSE	ENSG00000280068,ENSG00000250820	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_5q35.2	HERV	PRIMA41	oneside	chr5	176143001	176144373	-	noncoding	AC139491.5,AC139491.6,AC139491.2	transcribed_processed_pseudogene,transcribed_unprocessed_pseudogene,lncRNA	ANTISENSE,SENSE,SENSE	ENSG00000251623,ENSG00000283559,ENSG00000248596	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER101_5q35.2d	HERV	MER101	internal	chr5	176183849	176184617	-	noncoding	AC139491.2,AC139493.2	lncRNA,lncRNA	SENSE,SENSE	ENSG00000248596,ENSG00000283235	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_5q35.2e	HERV	MER101	internal	chr5	176254650	176256526	-	noncoding	SIMC1	protein_coding	ANTISENSE	ENSG00000170085	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_5q35.2b	HERV	MER4	internal	chr5	176424873	176428256	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010297.1	ENSG00000280139	10834	CLTB	ENSG00000175416	8304	None	None
MER4_5q35.2c	HERV	MER4	internal	chr5	176428554	176430591	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010297.1	ENSG00000280139	8499	CLTB	ENSG00000175416	11985	None	None
MER4_5q35.2d	HERV	MER4	oneside	chr5	176430654	176432619	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010297.1	ENSG00000280139	6471	CLTB	ENSG00000175416	14085	None	None
ERVLE_5q35.3a	HERV	ERVLE	internal	chr5	177555408	177557987	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC139795.3	ENSG00000272459	44	TMED9	ENSG00000184840	34216	None	None
MER101_5q35.3	HERV	MER101	internal	chr5	177655750	177657644	+	noncoding	AC139795.1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000246596	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q35.3a	HERV	ERV316A3	oneside	chr5	177931460	177936750	-	noncoding	AC106795.1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000170089	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5q35.3b	HERV	ERV316A3	internal	chr5	178592506	178593413	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	COL23A1	ENSG00000050767	2113	CLK4	ENSG00000113240	9251	None	None
ERV316A3_5q35.3c	HERV	ERV316A3	oneside	chr5	178640638	178641854	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113348.3	ENSG00000286713	48950	CLK4	ENSG00000113240	10023	None	None
ERVLB4_5q35.3a	HERV	ERVLB4	internal	chr5	178689467	178690079	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CLK4	ENSG00000113240	58852	AC113348.3	ENSG00000286713	725	None	None
ERVLE_5q35.3b	HERV	ERVLE	internal	chr5	178761713	178762749	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF354A	ENSG00000169131	31054	AACSP1	ENSG00000250420	2112	None	None
ERVLB4_5q35.3b	HERV	ERVLB4	oneside	chr5	179006598	179007490	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF879	ENSG00000234284	16314	AC104117.4	ENSG00000254158	7783	None	None
HERVEA_5q35.3	HERV	HERVEA	oneside	chr5	179048516	179055098	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF354C	ENSG00000177932	5275	ZNF879	ENSG00000234284	13452	None	None
ERVLE_5q35.3c	HERV	ERVLE	internal	chr5	179668380	179669547	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CBY3	ENSG00000204659	9013	AC136604.3	ENSG00000250999	3244	None	None
ERV316A3_5q35.3d	HERV	ERV316A3	internal	chr5	180252125	180252731	-	noncoding	MAPK9	protein_coding	SENSE	ENSG00000050748	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_5q35.3	HERV	HERVH	prototype	chr5	180415688	180420511	-	noncoding	AC034213.1	lncRNA	ANTISENSE	ENSG00000250509	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_5q35.3a	HERV	MER4	oneside	chr5	180781518	180783272	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MGAT1	ENSG00000131446	1510	OR2Y1	ENSG00000174339	41419	None	None
ERVLB4_5q35.3c	HERV	ERVLB4	oneside	chr5	180911856	180913898	+	noncoding	BTNL8	protein_coding	SENSE	ENSG00000113303	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_5q35.3	HERV	LTR25	internal	chr5	180976911	180982172	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC091874.1	ENSG00000231228	101	AC091874.3	ENSG00000249287	6149	None	None
MER4_5q35.3b	HERV	MER4	prototype	chr5	181143004	181147376	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR2V1	ENSG00000185372	11835	OR2V2	ENSG00000182613	210	None	None
ERV316A3_6p25.3a	HERV	ERV316A3	oneside	chr6	697674	699109	+	noncoding	AL357054.2	lncRNA	SENSE	ENSG00000271727	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6p25.3a	HERV	ERVLE	internal	chr6	823102	823698	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357054.2	ENSG00000271727	26321	AL356130.1	ENSG00000276687	81747	None	None
ERVLE_6p25.3b	HERV	ERVLE	internal	chr6	829630	831653	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357054.2	ENSG00000271727	32849	AL356130.1	ENSG00000276687	73792	None	None
HUERSP2_6p25.3	HERV	HUERSP2	prototype	chr6	920357	924946	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356130.1	ENSG00000276687	11351	LINC01622	ENSG00000286785	33377	None	None
ERV316A3_6p25.3b	HERV	ERV316A3	prototype	chr6	1020026	1024272	-	noncoding	LINC01622	lncRNA	SENSE	ENSG00000286785	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_6p25.3	HERV	HERVW	oneside	chr6	1330047	1331614	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL034346.1	ENSG00000261730	52176	LINC01394	ENSG00000281809	6025	None	None
ERVLE_6p25.3c	HERV	ERVLE	internal	chr6	1551452	1553202	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512329.2	ENSG00000272279	22541	FOXCUT	ENSG00000280916	48452	None	None
ERVLB4_6p25.3	HERV	ERVLB4	prototype	chr6	2163367	2165636	-	noncoding	GMDS	protein_coding	SENSE	ENSG00000112699	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6p25.2	HERV	HERVL	oneside	chr6	2303028	2307570	+	noncoding	GMDS-DT	lncRNA	SENSE	ENSG00000250903	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_6p25.2	HERV	HARLEQUIN	prototype	chr6	2310409	2318098	-	noncoding	GMDS-DT	lncRNA	ANTISENSE	ENSG00000250903	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6p25.2a	HERV	ERV316A3	oneside	chr6	2528675	2531830	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359852.2	ENSG00000287903	10	AL359852.1	ENSG00000280423	30117	None	None
ERV316A3_6p25.2b	HERV	ERV316A3	oneside	chr6	2591793	2596633	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359852.1	ENSG00000280423	27650	LINC02521	ENSG00000228718	20511	None	None
ERVLE_6p25.2a	HERV	ERVLE	internal	chr6	2686729	2687564	+	noncoding	MYLK4	protein_coding	ANTISENSE	ENSG00000145949	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6p25.2	HERV	HERVH	prototype	chr6	3167036	3173856	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUBB2A	ENSG00000137267	9492	TUBB2BP1	ENSG00000216819	3188	None	chr6:3171591-3171597
ERV316A3_6p25.2c	HERV	ERV316A3	prototype	chr6	3252869	3256853	-	noncoding	PSMG4	protein_coding	ANTISENSE	ENSG00000180822	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr6:3254401-3254408,chr6:3254093-3254098
HERVL74_6p25.2	HERV	HERVL74	internal	chr6	3928387	3931934	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TDGF1P4	ENSG00000217566	9348	AL590004.1	ENSG00000217135	6241	None	None
ERVLE_6p25.2b	HERV	ERVLE	oneside	chr6	3975212	3977466	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GLRX3P2	ENSG00000216657	596	TDGF1P4	ENSG00000217566	33411	None	None
MER101_6p25.2a	HERV	MER101	oneside	chr6	4170718	4173531	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ECI2-DT	ENSG00000234817	13333	AL136309.2	ENSG00000237716	11948	None	None
MER101_6p25.2b	HERV	MER101	internal	chr6	4173625	4174418	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ECI2-DT	ENSG00000234817	16240	AL136309.2	ENSG00000237716	11061	None	None
MER101_6p25.2c	HERV	MER101	oneside	chr6	4174714	4179435	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ECI2-DT	ENSG00000234817	17329	AL136309.2	ENSG00000237716	6044	None	None
ERV316A3_6p25.1a	HERV	ERV316A3	oneside	chr6	4239967	4241334	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136309.1	ENSG00000216307	50161	AL162718.1	ENSG00000285424	63608	None	None
HERVIP10F_6p25.1	HERV	HERVIP10F	oneside	chr6	4383883	4389648	+	noncoding	AL162718.1	lncRNA	ANTISENSE	ENSG00000285424	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_6p25.1a	HERV	HERVL40	prototype	chr6	4881840	4884887	+	noncoding	CDYL	protein_coding	SENSE	ENSG00000153046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6p25.1b	HERV	ERV316A3	oneside	chr6	4944269	4946147	-	noncoding	CDYL	protein_coding	ANTISENSE	ENSG00000153046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_6p25.1	HERV	HERVL74	oneside	chr6	5040795	5044083	+	coding	AL359643.3,AL359643.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000272142,ENSG00000271978	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_6p25.1	HERV	HUERSP3B	oneside	chr6	5563003	5566915	-	noncoding	FARS2	protein_coding	ANTISENSE	ENSG00000145982	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6p25.1a	HERV	ERVLE	internal	chr6	5876874	5880937	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL221P	ENSG00000239472	37627	AL136307.1	ENSG00000233064	6654	None	None
ERV316A3_6p25.1c	HERV	ERV316A3	oneside	chr6	5897965	5900536	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL221P	ENSG00000239472	18028	AL136307.1	ENSG00000233064	27745	None	None
HERVH_6p25.1	HERV	HERVH	prototype	chr6	6027810	6033600	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	F13A1	ENSG00000124491	110484	NRN1	ENSG00000124785	20205	None	chr6:6032314-6032327
HML3_6p25.1	HERV	HML3	oneside	chr6	6064962	6068594	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	F13A1	ENSG00000124491	75490	NRN1	ENSG00000124785	57357	None	None
ERVLE_6p25.1b	HERV	ERVLE	internal	chr6	6399456	6402344	+	noncoding	LY86-AS1	lncRNA	ANTISENSE	ENSG00000216863	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_6p25.1	HERV	ERVL	internal	chr6	6419960	6422665	-	noncoding	LY86-AS1	lncRNA	SENSE	ENSG00000216863	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_6p25.1b	HERV	HERVL40	oneside	chr6	6510562	6513116	-	noncoding	LY86-AS1	lncRNA	SENSE	ENSG00000216863	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6p25.1d	HERV	ERV316A3	internal	chr6	6688741	6691684	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031123.3	ENSG00000279368	1757	AL031123.1	ENSG00000226281	1057	None	None
ERV316A3_6p25.1e	HERV	ERV316A3	prototype	chr6	6862238	6863961	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158817.1	ENSG00000223342	37061	BTF3P7	ENSG00000219986	66836	None	None
ERV316A3_6p24.3a	HERV	ERV316A3	oneside	chr6	7657086	7661464	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BMP6	ENSG00000153162	64635	AL390026.1	ENSG00000236512	36208	None	None
HERVL_6p24.3a	HERV	HERVL	prototype	chr6	8403268	8409888	-	noncoding	AL355499.2	lncRNA	ANTISENSE	ENSG00000285216	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6p24.3a	HERV	ERVLE	internal	chr6	8879207	8881763	-	noncoding	HULC	lncRNA	ANTISENSE	ENSG00000285219	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6p24.3b	HERV	HERVL	prototype	chr6	9146719	9153053	+	noncoding	HULC,AL137220.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000285219,ENSG00000225775	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6p24.3b	HERV	ERVLE	internal	chr6	9174207	9178010	-	noncoding	HULC	lncRNA	ANTISENSE	ENSG00000285219	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6p24.3c	HERV	ERVLE	internal	chr6	9207926	9209712	+	noncoding	HULC	lncRNA	SENSE	ENSG00000285219	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6p24.3	HERV	ERVLB4	oneside	chr6	9274937	9276216	-	noncoding	HULC	lncRNA	ANTISENSE	ENSG00000285219	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6p24.3b	HERV	ERV316A3	internal	chr6	9414073	9416206	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HULC	ENSG00000285219	119940	OFCC1	ENSG00000181355	179904	None	None
HERVL_6p24.3c	HERV	HERVL	oneside	chr6	9549336	9551824	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HULC	ENSG00000285219	255203	OFCC1	ENSG00000181355	44286	None	None
ERV316A3_6p24.3c	HERV	ERV316A3	oneside	chr6	9720550	9721959	-	noncoding	OFCC1	transcribed_unitary_pseudogene	SENSE	ENSG00000181355	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_6p24.3	HERV	HERV9	prototype	chr6	9721961	9728411	+	coding	OFCC1	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000181355	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6p24.3d	HERV	ERV316A3	internal	chr6	9728421	9729276	-	noncoding	OFCC1	transcribed_unitary_pseudogene	SENSE	ENSG00000181355	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_6p24.3	HERV	HERVL40	oneside	chr6	10128221	10129725	+	noncoding	OFCC1	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000181355	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6p24.3e	HERV	ERV316A3	internal	chr6	10470652	10471818	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02522	ENSG00000231056	2682	MRPL48P1	ENSG00000238076	10111	None	None
ERVL_6p24.2	HERV	ERVL	internal	chr6	10639067	10641401	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358777.3	ENSG00000285763	18097	GCNT2P1	ENSG00000205318	4372	None	None
HERVFRD_6p24.2	HERV	HERVFRD	prototype	chr6	11102745	11112217	-	noncoding	SMIM13,ERVFRD-1	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000224531,ENSG00000244476	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	chr6:11111717-11111726,chr6:11111785-11111790,chr6:11111799-11111808,chr6:11111823-11111850,chr6:11111855-11111877
ERV316A3_6p24.2	HERV	ERV316A3	oneside	chr6	11498232	11500371	-	noncoding	AL445430.2	lncRNA	ANTISENSE	ENSG00000242753	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6p24.1a	HERV	ERVLE	internal	chr6	11657132	11658462	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL022724.1	ENSG00000207419	51357	AL357518.2	ENSG00000277473	12789	None	None
ERVLE_6p24.1b	HERV	ERVLE	internal	chr6	11684697	11686089	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL022724.1	ENSG00000207419	23730	AL357518.2	ENSG00000277473	40354	None	None
HERVFH21_6p24.1	HERV	HERVFH21	oneside	chr6	11786725	11791766	+	noncoding	ADTRP	protein_coding	ANTISENSE	ENSG00000111863	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:11787882-11788101	chr6:11791644-11791650,chr6:11787891-11787909
ERVLB4_6p24.1	HERV	ERVLB4	internal	chr6	12380757	12381686	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SUMO2P12	ENSG00000218893	61165	RN7SKP293	ENSG00000223321	24800	None	None
HERVH_6p24.1	HERV	HERVH	prototype	chr6	12667170	12673014	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02530	ENSG00000234015	81766	PHACTR1	ENSG00000112137	43791	None	None
MER41_6p24.1	HERV	MER41	prototype	chr6	12742106	12744723	-	noncoding	PHACTR1	protein_coding	ANTISENSE	ENSG00000112137	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_6p23	HERV	HERVW	prototype	chr6	13878336	13883724	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL023583.1	ENSG00000272209	51762	RNF182	ENSG00000180537	40722	None	None
MER41_6p23	HERV	MER41	prototype	chr6	13945813	13953267	-	noncoding	RNF182,MRPL35P1	protein_coding,processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000180537,ENSG00000220868	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_6p23	HERV	HERVH	prototype	chr6	14296942	14302823	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL080313.2	ENSG00000237346	88271	LINC01108	ENSG00000226673	11488	None	None
ERVLB4_6p23	HERV	ERVLB4	internal	chr6	14432680	14438711	+	noncoding	AL009177.1	lncRNA	SENSE	ENSG00000286277	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6p23	HERV	ERV316A3	oneside	chr6	14563152	14566549	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL009177.1	ENSG00000286277	60451	AL109914.1	ENSG00000229646	30965	None	None
HUERSP2_6p22.3	HERV	HUERSP2	internal	chr6	15337166	15339964	+	coding	JARID2	protein_coding	SENSE	ENSG00000008083	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6p22.3	HERV	MER41	prototype	chr6	15555300	15562289	+	coding	DTNBP1,AL021978.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000047579,ENSG00000287626	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr6:15555629-15555845	chr6:15562134-15562140
ERVLE_6p22.3a	HERV	ERVLE	internal	chr6	15715519	15717678	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DTNBP1	ENSG00000047579	52461	ARPC3P5	ENSG00000214027	217104	None	None
HERV3_6p22.3	HERV	HERV3	prototype	chr6	16223536	16231782	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138883.1	ENSG00000207193	449	RNU6-1114P	ENSG00000251831	18416	None	chr6:16226455-16226460
HERVH_6p22.3a	HERV	HERVH	prototype	chr6	16259012	16264893	-	noncoding	GMPR,AL009031.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000137198,ENSG00000282024	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr6:16263613-16263637,chr6:16264008-16264014
HERV9_6p22.3	HERV	HERV9	prototype	chr6	16455730	16464625	+	noncoding	ATXN1	protein_coding	ANTISENSE	ENSG00000124788	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6p22.3b	HERV	HERVH	prototype	chr6	16885985	16891647	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137003.1	ENSG00000272341	119102	AL133405.2	ENSG00000287347	9457	None	None
ERV316A3_6p22.3a	HERV	ERV316A3	oneside	chr6	17265730	17270638	+	noncoding	AL136305.1	lncRNA	ANTISENSE	ENSG00000287559	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH21_6p22.3	HERV	HERVFH21	prototype	chr6	17318885	17327379	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL034372.1	ENSG00000219314	53988	RBM24	ENSG00000112183	25014	None	None
ERVLB4_6p22.3a	HERV	ERVLB4	internal	chr6	17340186	17342723	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBM24	ENSG00000112183	46315	AL034372.1	ENSG00000219314	38644	None	chr6:17341224-17341231
MER4_6p22.3a	HERV	MER4	oneside	chr6	17561125	17566466	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SUMO2P13	ENSG00000218359	15568	CAP2	ENSG00000112186	3335	None	None
MER4_6p22.3b	HERV	MER4	oneside	chr6	17566698	17570361	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SUMO2P13	ENSG00000218359	11673	CAP2	ENSG00000112186	8908	None	None
HERVH_6p22.3c	HERV	HERVH	prototype	chr6	18754144	18759870	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589647.1	ENSG00000217379	383825	MIR548A1HG	ENSG00000283408	80143	None	chr6:18758886-18758891
ERV316A3_6p22.3b	HERV	ERV316A3	prototype	chr6	19363924	19367993	-	noncoding	LNC-LBCS	lncRNA	SENSE	ENSG00000228412	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6p22.3c	HERV	ERV316A3	prototype	chr6	19372094	19375716	+	noncoding	LNC-LBCS	lncRNA	ANTISENSE	ENSG00000228412	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6p22.3a	HERV	HERVL	oneside	chr6	19401579	19406907	-	noncoding	LNC-LBCS	lncRNA	SENSE	ENSG00000228412	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6p22.3d	HERV	HERVH	oneside	chr6	19539462	19544813	+	noncoding	LNC-LBCS	lncRNA	ANTISENSE	ENSG00000228412	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6p22.3b	HERV	ERVLE	internal	chr6	20603124	20605316	+	noncoding	CDKAL1	protein_coding	SENSE	ENSG00000145996	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL32_6p22.3	HERV	HERVL32	oneside	chr6	21355378	21361143	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031767.2	ENSG00000286368	8547	AL031767.1	ENSG00000227089	82	None	None
HERVH_6p22.3e	HERV	HERVH	prototype	chr6	21361492	21367257	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031767.2	ENSG00000286368	2433	AL031767.1	ENSG00000227089	6196	None	None
HUERSP3B_6p22.3a	HERV	HUERSP3B	prototype	chr6	22370432	22379334	+	noncoding	CASC15	lncRNA	SENSE	ENSG00000272168	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_6p22.3	HERV	HERVL40	oneside	chr6	22774773	22781446	-	noncoding	AL035401.1	lncRNA	SENSE	ENSG00000233358	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6p22.3c	HERV	ERVLE	prototype	chr6	23039563	23043479	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL035401.1	ENSG00000233358	7783	AL591416.1	ENSG00000218476	59201	None	None
HUERSP3B_6p22.3b	HERV	HUERSP3B	oneside	chr6	23107998	23113276	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1060P	ENSG00000207394	11705	AL591416.1	ENSG00000218476	4452	None	None
HUERSP3B_6p22.3c	HERV	HUERSP3B	oneside	chr6	23113704	23116867	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1060P	ENSG00000207394	8114	AL591416.1	ENSG00000218476	10158	None	None
HERVL_6p22.3b	HERV	HERVL	oneside	chr6	23155783	23160438	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1060P	ENSG00000207394	30696	AL139231.1	ENSG00000235743	177273	None	None
HML5_6p22.3	HERV	HML5	prototype	chr6	23160944	23168686	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1060P	ENSG00000207394	35857	AL139231.1	ENSG00000235743	169025	None	None
ERV316A3_6p22.3d	HERV	ERV316A3	oneside	chr6	23241607	23243932	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1060P	ENSG00000207394	116520	AL139231.1	ENSG00000235743	93779	None	None
ERV316A3_6p22.3e	HERV	ERV316A3	prototype	chr6	23593549	23599770	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133270.1	ENSG00000219453	49726	AL139231.1	ENSG00000235743	189417	None	None
ERVLE_6p22.3d	HERV	ERVLE	oneside	chr6	23637272	23641325	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133270.1	ENSG00000219453	8171	AL139231.1	ENSG00000235743	233140	None	chr6:23637398-23637409,chr6:23637456-23637458,chr6:23637469-23637472,chr6:23637483-23637489
ERVLB4_6p22.3b	HERV	ERVLB4	prototype	chr6	23739284	23743638	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL139093.1	ENSG00000278128	110501	AL133270.1	ENSG00000219453	89510	None	None
ERVLE_6p22.3e	HERV	ERVLE	internal	chr6	23834760	23835442	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133270.1	ENSG00000219453	184986	AL139093.1	ENSG00000278128	18697	None	None
ERV316A3_6p22.3f	HERV	ERV316A3	oneside	chr6	24163042	24166457	-	noncoding	FO393410.1	snoRNA	ANTISENSE	ENSG00000251830	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_6p22.3c	HERV	MER4	oneside	chr6	24669089	24674396	-	noncoding	ACOT13	protein_coding	ANTISENSE	ENSG00000112304	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_6p22.3	HERV	HERVW	oneside	chr6	24676688	24683100	-	noncoding	ACOT13	protein_coding	ANTISENSE	ENSG00000112304	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_6p22.3d	HERV	MER4	prototype	chr6	25128933	25136513	+	noncoding	CMAHP,AL133268.4	transcribed_unitary_pseudogene,lncRNA	ANTISENSE,SENSE	ENSG00000168405,ENSG00000285801	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6p22.2a	HERV	ERVLE	internal	chr6	25217330	25218207	+	noncoding	CMAHP	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000168405	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR46_6p22.2	HERV	LTR46	oneside	chr6	25835820	25838436	-	noncoding	SLC17A3	protein_coding	SENSE	ENSG00000124564	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:25835996-25836223	None
ERV316A3_6p22.2	HERV	ERV316A3	oneside	chr6	25838435	25840551	-	noncoding	SLC17A3	protein_coding	SENSE	ENSG00000124564	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6p22.2	HERV	MER41	prototype	chr6	25951314	25955011	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRIM38	ENSG00000112343	7791	SLC17A2	ENSG00000112337	20588	None	None
HARLEQUIN_6p22.2	HERV	HARLEQUIN	prototype	chr6	26075040	26081760	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	H1-2	ENSG00000187837	18612	HFE	ENSG00000010704	5521	None	None
HML5_6p22.2	HERV	HML5	prototype	chr6	26257219	26260461	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	H2BC9	ENSG00000275713	3509	H3C8	ENSG00000273983	8944	None	chr6:26257493-26257505,chr6:26257526-26257527
HML6_6p22.2	HERV	HML6	prototype	chr6	26288022	26296266	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	H3C9P	ENSG00000220875	25610	H4C8	ENSG00000158406	2384	None	None
HERV3_6p22.2	HERV	HERV3	internal	chr6	26343462	26344951	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL021917.1	ENSG00000287050	11562	BTN3A2	ENSG00000186470	20208	None	None
MER101_6p22.2	HERV	MER101	oneside	chr6	26992582	26994782	-	noncoding	LINC00240	lncRNA	ANTISENSE	ENSG00000224843	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6p22.2b	HERV	ERVLE	internal	chr6	27044303	27046624	+	noncoding	LINC00240	lncRNA	SENSE	ENSG00000224843	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6p22.1a	HERV	ERVLE	internal	chr6	27128640	27129713	-	noncoding	H2BC11	protein_coding	SENSE	ENSG00000124635	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6p22.1a	HERV	ERVLB4	internal	chr6	27153618	27154593	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL10P2	ENSG00000174572	56651	MIR3143	ENSG00000265565	5930	None	None
HERVKC4_6p22.1	HERV	HERVKC4	prototype	chr6	27187521	27196279	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3143	ENSG00000265565	39833	RPL10P2	ENSG00000174572	14965	chr6:27188492-27188644	None
ERVLE_6p22.1b	HERV	ERVLE	internal	chr6	27206996	27209753	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3143	ENSG00000265565	59308	RPL10P2	ENSG00000174572	1491	None	None
HERVL18_6p22.1a	HERV	HERVL18	oneside	chr6	27405363	27407723	-	noncoding	AL031118.1,MCFD2P1	lncRNA,processed_pseudogene	SENSE,ANTISENSE	ENSG00000271755,ENSG00000237154	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr6:27407529-27407937	chr6:27407414-27407415
ERVLB4_6p22.1b	HERV	ERVLB4	oneside	chr6	27632305	27634033	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031229.1	ENSG00000216676	18569	RNU6-471P	ENSG00000206671	35788	None	None
HERVL_6p22.1	HERV	HERVL	internal	chr6	27634032	27636313	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031229.1	ENSG00000216676	16289	RNU6-471P	ENSG00000206671	37515	None	None
ERV316A3_6p22.1a	HERV	ERV316A3	oneside	chr6	27945679	27947350	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR2B6	ENSG00000124657	9891	OR2W6P	ENSG00000168126	7276	None	None
HERVL18_6p22.1b	HERV	HERVL18	prototype	chr6	28000512	28003589	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR2W4P	ENSG00000216629	22437	IQCB2P	ENSG00000217539	7134	None	None
ERV316A3_6p22.1b	HERV	ERV316A3	oneside	chr6	28342079	28347246	+	noncoding	ZSCAN31	protein_coding	ANTISENSE	ENSG00000235109	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_6p22.1c	HERV	HERVL18	prototype	chr6	28353865	28357249	-	noncoding	ZSCAN31,ZKSCAN3	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000235109,ENSG00000189298	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr6:28354034-28354047,chr6:28354050-28354079,chr6:28354132-28354188,chr6:28354194-28354218,chr6:28354227-28354246,chr6:28354264-28354273
ERV316A3_6p22.1c	HERV	ERV316A3	oneside	chr6	28454462	28455650	-	noncoding	OR2E1P	unprocessed_pseudogene	SENSE	ENSG00000219262	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML2_6p22.1	HERV	HML2	unknown	chr6	28682591	28692958	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL121932.2	ENSG00000287279	33053	RPSAP2	ENSG00000237425	39059	None	None
ERVLE_6p22.1c	HERV	ERVLE	internal	chr6	28704386	28705528	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP2	ENSG00000237425	26489	AL121932.2	ENSG00000287279	54848	None	None
HERVS71_6p22.1	HERV	HERVS71	prototype	chr6	28766179	28776502	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NOP56P1	ENSG00000235559	7131	RPSAP2	ENSG00000237425	33275	None	chr6:28776042-28776068
LTR57_6p22.1	HERV	LTR57	prototype	chr6	28868273	28875869	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF90P2	ENSG00000233366	12963	LINC01623	ENSG00000225595	3643	None	chr6:28872178-28872184
MER41_6p22.1a	HERV	MER41	internal	chr6	29142477	29143260	-	noncoding	AL645937.1	transcribed_unprocessed_pseudogene	SENSE	ENSG00000203492	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_6p22.1b	HERV	MER41	oneside	chr6	29143266	29144503	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645937.1	ENSG00000203492	332	AL645937.4	ENSG00000284656	17972	None	None
ERV316A3_6p22.1d	HERV	ERV316A3	oneside	chr6	29209120	29212517	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR2J4P	ENSG00000224233	26675	AL645937.3	ENSG00000230598	369	None	None
HERVH_6p22.1	HERV	HERVH	prototype	chr6	29245477	29252808	-	noncoding	AL672167.1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000197171	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6p22.1e	HERV	ERV316A3	internal	chr6	29404359	29405943	+	noncoding	OR5V1	protein_coding	ANTISENSE	ENSG00000243729	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_6p22.1	HERV	MER4	oneside	chr6	29521853	29527396	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01015	ENSG00000224582	1325	LINC02829	ENSG00000229274	11295	None	None
ERV316A3_6p22.1f	HERV	ERV316A3	internal	chr6	29579631	29584117	-	noncoding	GABBR1,SNORD32B,RPL13AP	protein_coding,snoRNA,processed_pseudogene	SENSE,ANTISENSE,ANTISENSE	ENSG00000204681,ENSG00000201330,ENSG00000231301	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_6p22.1	HERV	HERVL40	internal	chr6	29683681	29684478	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZFP57	ENSG00000204644	2571	ZDHHC20P1	ENSG00000233916	23647	None	None
ERV316A3_6p22.1g	HERV	ERV316A3	oneside	chr6	29710867	29715028	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZDHHC20P1	ENSG00000233916	2320	HLA-F	ENSG00000204642	7747	None	None
ERV316A3_6p22.1h	HERV	ERV316A3	prototype	chr6	29767822	29772967	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645939.4	ENSG00000270896	4430	HLA-V	ENSG00000181126	17987	None	None
ERV316A3_6p22.1i	HERV	ERV316A3	oneside	chr6	29793128	29794351	+	noncoding	HLA-V	transcribed_unprocessed_pseudogene	SENSE	ENSG00000181126	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6p22.1j	HERV	ERV316A3	oneside	chr6	29815953	29818692	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MICG	ENSG00000237042	3257	HLA-G	ENSG00000204632	8275	None	None
ERV316A3_6p22.1k	HERV	ERV316A3	prototype	chr6	29868623	29874102	+	noncoding	AL645929.3,AL645929.2	transcribed_unprocessed_pseudogene,lncRNA	ANTISENSE,ANTISENSE	ENSG00000285799,ENSG00000281831	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_6p22.1	HERV	HML3	prototype	chr6	29875650	29881829	-	noncoding	AL645929.3	transcribed_unprocessed_pseudogene	SENSE	ENSG00000285799	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6p22.1l	HERV	ERV316A3	internal	chr6	29892311	29893557	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HLA-H	ENSG00000206341	1829	HLA-T	ENSG00000231130	3097	None	None
ERV316A3_6p22.1m	HERV	ERV316A3	prototype	chr6	29912749	29918216	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MCCD1P1	ENSG00000235963	4104	HCG4B	ENSG00000227262	7767	None	None
ERV316A3_6p22.1n	HERV	ERV316A3	oneside	chr6	29946920	29950412	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HLA-A	ENSG00000206503	1036	HLA-W	ENSG00000235290	6184	None	None
HERVP71A_6p22.1	HERV	HERVP71A	oneside	chr6	29962489	29970366	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HLA-W	ENSG00000235290	3919	MICD	ENSG00000229390	435	chr6:29964922-29965104	chr6:29965020-29965040,chr6:29965066-29965081,chr6:29964964-29964986,chr6:29966121-29966133
ERV316A3_6p22.1o	HERV	ERV316A3	prototype	chr6	29997951	30003286	+	noncoding	ZNRD1ASP	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000204623	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6p22.1p	HERV	ERV316A3	internal	chr6	30276058	30277473	+	noncoding	HCG17,HLA-L	lncRNA,transcribed_unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000270604,ENSG00000243753	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6p22.1d	HERV	ERVLE	internal	chr6	30379919	30380543	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MICC	ENSG00000226577	34172	UBQLN1P1	ENSG00000236405	15639	None	None
HERVL_6p21.33a	HERV	HERVL	oneside	chr6	30966374	30971833	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NAPGP2	ENSG00000275906	3978	MUC21	ENSG00000204544	11885	None	None
ERVLE_6p21.33	HERV	ERVLE	internal	chr6	31036968	31041018	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HCG22	ENSG00000228789	12432	MUC22	ENSG00000261272	1566	chr6:31037346-31037559	None
HARLEQUIN_6p21.33	HERV	HARLEQUIN	oneside	chr6	31181866	31186769	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL662844.4	ENSG00000272501	8431	POU5F1	ENSG00000204531	1135	None	chr6:31183221-31183228,chr6:31186106-31186123,chr6:31186394-31186408
HERV3_6p21.33	HERV	HERV3	oneside	chr6	31225751	31228462	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HLA-C	ENSG00000204525	40287	AL662844.2	ENSG00000255899	693	None	None
HML3_6p21.33	HERV	HML3	prototype	chr6	31231985	31236096	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HLA-C	ENSG00000204525	32653	AL662844.2	ENSG00000255899	6927	None	None
ERVLB4_6p21.33a	HERV	ERVLB4	internal	chr6	31245355	31246550	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HLA-C	ENSG00000204525	22199	AL662844.2	ENSG00000255899	20297	None	None
ERV316A3_6p21.33a	HERV	ERV316A3	internal	chr6	31300558	31302000	+	noncoding	HLA-B,LINC02571	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000234745,ENSG00000256166	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6p21.33b	HERV	ERVLB4	oneside	chr6	31320444	31321942	-	noncoding	HLA-B	protein_coding	SENSE	ENSG00000234745	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6p21.33c	HERV	ERVLB4	internal	chr6	31376331	31377123	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FGFR3P1	ENSG00000230994	296	AL671883.3	ENSG00000285647	243	None	None
ERV316A3_6p21.33b	HERV	ERV316A3	oneside	chr6	31383746	31387283	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645933.3	ENSG00000272221	7006	HLA-S	ENSG00000225851	1458	None	None
HERVL_6p21.33b	HERV	HERVL	oneside	chr6	31429886	31436004	+	noncoding	AL645933.5	lncRNA	SENSE	ENSG00000288587	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6p21.33c	HERV	ERV316A3	prototype	chr6	31463420	31469043	-	noncoding	AL645933.5,HCP5	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000288587,ENSG00000206337	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVKC4_6p21.33a	HERV	HERVKC4	prototype	chr6	31984692	31991052	-	coding	C4A	protein_coding	ANTISENSE	ENSG00000244731	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVKC4_6p21.33b	HERV	HERVKC4	prototype	chr6	32017430	32023790	-	coding	C4B	protein_coding	ANTISENSE	ENSG00000224389	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_6p21.32	HERV	HUERSP2	oneside	chr6	32374313	32376450	+	noncoding	TSBP1-AS1	lncRNA	SENSE	ENSG00000225914	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_6p21.32a	HERV	HML6	oneside	chr6	32475495	32479598	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HLA-DRB5	ENSG00000198502	37755	HLA-DRB9	ENSG00000196301	1995	None	None
HML6_6p21.32b	HERV	HML6	prototype	chr6	32559720	32567345	-	noncoding	HLA-DRB6	transcribed_unprocessed_pseudogene	SENSE	ENSG00000229391	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr6:32567041-32567047,chr6:32567059-32567069,chr6:32567070-32567082
HERVFH19_6p21.32	HERV	HERVFH19	oneside	chr6	32706957	32708797	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO3P1	ENSG00000235040	2	AL662789.1	ENSG00000232080	9208	None	None
HML5_6p21.32	HERV	HML5	oneside	chr6	33049231	33056518	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HLA-DOA	ENSG00000204252	39640	HLA-DPA1	ENSG00000231389	8051	chr6:33050945-33051005	None
HUERSP3_6p21.32	HERV	HUERSP3	prototype	chr6	33117739	33125003	-	noncoding	HLA-DPB2	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000224557	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr6:33119983-33120202	chr6:33117911-33117921,chr6:33120096-33120109,chr6:33124534-33124564
MER41_6p21.32	HERV	MER41	internal	chr6	33135484	33138647	-	noncoding	HLA-DPA3	unprocessed_pseudogene	SENSE	ENSG00000237398	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6p21.32	HERV	HERVH	oneside	chr6	33345910	33351803	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MYL8P	ENSG00000229596	6415	LYPLA2P1	ENSG00000228285	13745	None	None
HARLEQUIN_6p21.32	HERV	HARLEQUIN	internal	chr6	33351884	33355241	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LYPLA2P1	ENSG00000228285	10307	MYL8P	ENSG00000229596	12389	None	None
ERVLE_6p21.32	HERV	ERVLE	internal	chr6	33491772	33494874	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZBTB9	ENSG00000213588	34228	GGNBP1	ENSG00000204188	45172	None	None
ERVLE_6p21.31a	HERV	ERVLE	internal	chr6	33940363	33944337	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138889.1	ENSG00000233183	12732	MIR1275	ENSG00000221697	55635	None	None
ERV316A3_6p21.31	HERV	ERV316A3	oneside	chr6	34487488	34488731	-	noncoding	PACSIN1	protein_coding	ANTISENSE	ENSG00000124507	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_6p21.31	HERV	HARLEQUIN	prototype	chr6	34998361	35004307	+	noncoding	ANKS1A	protein_coding	SENSE	ENSG00000064999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:34999923-35000113	None
HML5_6p21.31	HERV	HML5	oneside	chr6	35106285	35108199	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TCP11	ENSG00000124678	9872	ANKS1A	ENSG00000064999	14879	chr6:35107258-35107419	None
ERVLE_6p21.31b	HERV	ERVLE	internal	chr6	35123248	35127626	+	noncoding	TCP11	protein_coding	ANTISENSE	ENSG00000124678	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6p21.31c	HERV	ERVLE	internal	chr6	35536499	35539739	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TULP1	ENSG00000112041	23603	AL033519.4	ENSG00000228559	99	None	None
MER4_6p21.31	HERV	MER4	internal	chr6	35800496	35801904	+	noncoding	LHFPL5	protein_coding	SENSE	ENSG00000197753	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6p21.31d	HERV	ERVLE	internal	chr6	36172272	36173535	+	noncoding	Z84485.1	lncRNA	ANTISENSE	ENSG00000246982	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6p21.2a	HERV	ERVLE	internal	chr6	36688707	36691575	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAB44	ENSG00000255587	6251	CDKN1A	ENSG00000124762	1368	None	None
PABLA_6p21.2	HERV	PABLA	internal	chr6	36879007	36882287	+	noncoding	C6orf89	protein_coding	SENSE	ENSG00000198663	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6p21.2b	HERV	ERVLE	internal	chr6	37716148	37717322	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121574.1	ENSG00000225945	98455	MDGA1	ENSG00000112139	16842	None	None
HERV9_6p21.2	HERV	HERV9	prototype	chr6	38616529	38624486	+	noncoding	BTBD9	protein_coding	ANTISENSE	ENSG00000183826	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6p21.2a	HERV	ERV316A3	internal	chr6	38660109	38662217	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BTBD9	ENSG00000183826	19961	GLO1	ENSG00000124767	13708	None	None
ERV316A3_6p21.2b	HERV	ERV316A3	internal	chr6	38662225	38663259	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GLO1	ENSG00000124767	12666	BTBD9	ENSG00000183826	22077	None	None
HERVH_6p21.2a	HERV	HERVH	oneside	chr6	39121132	39122886	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SAYSD1	ENSG00000112167	5946	KCNK5	ENSG00000164626	66085	None	None
HERVH_6p21.2b	HERV	HERVH	prototype	chr6	39131513	39136520	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCNK5	ENSG00000164626	52451	SAYSD1	ENSG00000112167	16327	None	None
HERV3_6p21.2	HERV	HERV3	internal	chr6	39993652	39999033	-	noncoding	TUBBP9	transcribed_processed_pseudogene	ANTISENSE	ENSG00000220586	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr6:39994546-39994551,chr6:39994556-39994566,chr6:39994598-39994603
HUERSP1_6p21.2	HERV	HUERSP1	internal	chr6	40049241	40049884	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUBBP9	ENSG00000220586	48714	AL139275.2	ENSG00000227131	221682	None	None
PABLB_6p21.2	HERV	PABLB	internal	chr6	40050106	40052929	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUBBP9	ENSG00000220586	49579	AL139275.2	ENSG00000227131	218637	None	None
ERVLB4_6p21.2	HERV	ERVLB4	internal	chr6	40097140	40097876	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUBBP9	ENSG00000220586	96613	AL139275.2	ENSG00000227131	173690	None	None
ERV316A3_6p21.2c	HERV	ERV316A3	prototype	chr6	40112545	40116908	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUBBP9	ENSG00000220586	112018	AL139275.2	ENSG00000227131	154658	None	None
ERV316A3_6p21.2d	HERV	ERV316A3	internal	chr6	40123126	40126514	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUBBP9	ENSG00000220586	122599	AL139275.2	ENSG00000227131	145052	None	None
HERVL32_6p21.2	HERV	HERVL32	prototype	chr6	40129734	40135877	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUBBP9	ENSG00000220586	129207	AL139275.2	ENSG00000227131	135689	None	None
ERVLE_6p21.2c	HERV	ERVLE	unknown	chr6	40144681	40146320	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUBBP9	ENSG00000220586	144154	AL139275.2	ENSG00000227131	125246	None	None
ERVLE_6p21.2d	HERV	ERVLE	prototype	chr6	40218526	40222682	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUBBP9	ENSG00000220586	217999	AL139275.2	ENSG00000227131	48884	None	None
HERVH_6p21.1	HERV	HERVH	prototype	chr6	40861398	40868767	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	UNC5CL	ENSG00000124602	158128	AL583854.1	ENSG00000237947	146035	None	None
MER41_6p21.1	HERV	MER41	internal	chr6	41290897	41291520	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-643P	ENSG00000206745	10946	TREM1	ENSG00000124731	4215	None	None
HUERSP1_6p21.1	HERV	HUERSP1	oneside	chr6	42059405	42062899	-	noncoding	TAF8	protein_coding	ANTISENSE	ENSG00000137413	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_6p21.1	HERV	HML2	prototype	chr6	42893671	42903629	-	coding	AL035587.3	lncRNA	SENSE	ENSG00000288010	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6p21.1a	HERV	ERVLE	internal	chr6	42907134	42908768	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL035587.3	ENSG00000288010	4062	PTCRA	ENSG00000171611	7221	None	None
ERVLE_6p21.1b	HERV	ERVLE	internal	chr6	43381215	43385701	-	noncoding	AL359813.1	lncRNA	ANTISENSE	ENSG00000287055	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_6p21.1a	HERV	HERVP71A	oneside	chr6	43390787	43393150	+	noncoding	AL359813.1	lncRNA	SENSE	ENSG00000287055	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_6p21.1b	HERV	HERVP71A	oneside	chr6	43396148	43400430	+	noncoding	AL359813.1	lncRNA	SENSE	ENSG00000287055	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER101_6p21.1	HERV	MER101	internal	chr6	44210586	44213812	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL811P	ENSG00000265439	523	MYMX	ENSG00000262179	3114	None	None
HML3_6p21.1	HERV	HML3	prototype	chr6	45235730	45241700	+	noncoding	SUPT3H	protein_coding	ANTISENSE	ENSG00000196284	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6p21.1c	HERV	ERVLE	internal	chr6	46179764	46180883	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ENPP5	ENSG00000112796	8784	ACTG1P9	ENSG00000229349	23846	None	None
ERV316A3_6p12.3a	HERV	ERV316A3	prototype	chr6	47152770	47156944	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TNFRSF21	ENSG00000146072	74588	ADGRF1	ENSG00000153292	110420	chr6:47153361-47153499	None
HERVL_6p12.3a	HERV	HERVL	prototype	chr6	47175690	47182207	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TNFRSF21	ENSG00000146072	49325	ADGRF1	ENSG00000153292	133340	None	None
HML3_6p12.3	HERV	HML3	prototype	chr6	47312692	47316775	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	B3GNTL1P2	ENSG00000271328	52168	TNFRSF21	ENSG00000146072	2787	None	None
HARLEQUIN_6p12.3	HERV	HARLEQUIN	oneside	chr6	47641260	47648143	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CD2AP	ENSG00000198087	13997	ADGRF2	ENSG00000164393	8293	None	None
ERV316A3_6p12.3b	HERV	ERV316A3	oneside	chr6	48599818	48604298	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FO393412.1	ENSG00000278736	97193	RBMXP1	ENSG00000216835	385024	None	None
LTR23_6p12.3	HERV	LTR23	oneside	chr6	48853508	48855356	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL391538.1	ENSG00000287137	57995	AL022099.1	ENSG00000271162	96714	None	None
HERVK14C_6p12.3	HERV	HERVK14C	prototype	chr6	48873676	48879725	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL391538.1	ENSG00000287137	78163	AL022099.1	ENSG00000271162	72345	None	None
ERV316A3_6p12.3c	HERV	ERV316A3	oneside	chr6	49065537	49070971	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL022099.1	ENSG00000271162	112756	AL589994.1	ENSG00000218337	6741	None	None
ERVLE_6p12.3a	HERV	ERVLE	internal	chr6	49360613	49362696	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MMUT	ENSG00000146085	67664	EEF1A1P42	ENSG00000277043	193	None	None
HERVL_6p12.3b	HERV	HERVL	internal	chr6	49439021	49440123	-	noncoding	MMUT	protein_coding	SENSE	ENSG00000146085	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11D_6p12.3	HERV	HERVK11D	prototype	chr6	49501278	49508842	-	coding	GLYATL3	protein_coding	ANTISENSE	ENSG00000203972	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_6p12.3	HERV	PABLA	internal	chr6	49717615	49721439	-	noncoding	AL121974.1	lncRNA	ANTISENSE	ENSG00000235122	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6p12.3	HERV	MER41	oneside	chr6	49721416	49722594	-	noncoding	AL121974.1,AL121950.1	lncRNA,TEC	ANTISENSE,ANTISENSE	ENSG00000235122,ENSG00000279127	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML5_6p12.3	HERV	HML5	prototype	chr6	49886919	49891450	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DEFB133	ENSG00000214643	54571	CRISP1	ENSG00000124812	9823	chr6:49891054-49891330	None
HERVL_6p12.3c	HERV	HERVL	oneside	chr6	50356594	50359102	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138826.1	ENSG00000226733	175587	AL132799.1	ENSG00000286405	52742	None	None
ERVLE_6p12.3b	HERV	ERVLE	prototype	chr6	50361316	50363225	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL132799.1	ENSG00000286405	48619	AL138826.1	ENSG00000226733	180309	None	None
HERVL_6p12.3d	HERV	HERVL	prototype	chr6	51051785	51058810	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FTH1P5	ENSG00000230204	138529	AL158050.2	ENSG00000270306	326472	None	None
HERVH_6p12.2	HERV	HERVH	prototype	chr6	51938241	51944426	+	noncoding	PKHD1	protein_coding	ANTISENSE	ENSG00000170927	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6p12.2	HERV	ERV316A3	internal	chr6	52322920	52324727	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PAQR8	ENSG00000170915	36694	MCM3	ENSG00000112118	38039	None	None
PABLA_6p12.2	HERV	PABLA	internal	chr6	52705570	52709742	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GSTA8P	ENSG00000220377	1745	GSTA7P	ENSG00000237674	29848	None	None
HERVW_6p12.2	HERV	HERVW	prototype	chr6	52914876	52921914	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GSTA9P	ENSG00000243236	17812	GSTA3	ENSG00000174156	5178	None	None
HERV3_6p12.2	HERV	HERV3	internal	chr6	52921915	52927154	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GSTA3	ENSG00000174156	12217	GSTA9P	ENSG00000243236	12572	None	None
MER101_6p12.1	HERV	MER101	prototype	chr6	53083391	53090346	-	coding	FBXO9	protein_coding	ANTISENSE	ENSG00000112146	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:53087432-53087705	None
ERVLE_6p12.1a	HERV	ERVLE	internal	chr6	53416949	53420757	+	noncoding	NANOGP3	processed_pseudogene	ANTISENSE	ENSG00000271373	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_6p12.1	HERV	MER4	prototype	chr6	53555820	53563424	+	noncoding	GCLC,AL033397.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000001084,ENSG00000231683	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6p12.1b	HERV	ERVLE	internal	chr6	55378263	55378866	-	noncoding	GFRAL	protein_coding	ANTISENSE	ENSG00000187871	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6p12.1	HERV	HERVL	oneside	chr6	55624104	55627881	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HMGCLL1	ENSG00000146151	44890	AL590290.1	ENSG00000220725	52761	None	None
ERVLE_6p12.1c	HERV	ERVLE	prototype	chr6	55801103	55804074	+	noncoding	BMP5	protein_coding	ANTISENSE	ENSG00000112175	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6p12.1	HERV	HERVH	oneside	chr6	56010739	56016786	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	COL21A1	ENSG00000124749	39804	NPM1P36	ENSG00000214604	70115	None	None
HML5_6p12.1	HERV	HML5	prototype	chr6	57069873	57074762	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KIAA1586	ENSG00000168116	14634	ZNF451	ENSG00000112200	12082	None	None
HERVL_6p11.2	HERV	HERVL	oneside	chr6	57664143	57666573	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PRIM2	ENSG00000146143	17293	AL021368.3	ENSG00000272541	189318	None	None
HERVK11_6p11.2	HERV	HERVK11	internal	chr6	58399982	58403956	+	noncoding	AL445250.1	lncRNA	SENSE	ENSG00000225096	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_6p11.2	HERV	HML3	prototype	chr6	58412696	58419708	-	noncoding	AL445250.1	lncRNA	ANTISENSE	ENSG00000225096	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMAX_6q11.1	HERV	PRIMAX	internal	chr6	60485646	60486423	-	noncoding	AC244258.1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000283453	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q11.1a	HERV	HERVL	oneside	chr6	60562941	60565366	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC244258.1	ENSG00000283453	16281	GAPDHP41	ENSG00000277172	153856	None	None
HML2_6q11.1	HERV	HML2	prototype	chr6	60654987	60660975	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC244258.1	ENSG00000283453	108327	GAPDHP41	ENSG00000277172	58247	None	None
MER4_6q11.1a	HERV	MER4	internal	chr6	61208004	61212425	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356131.1	ENSG00000220030	28473	AL512427.2	ENSG00000287598	265677	None	None
MER4_6q11.1b	HERV	MER4	oneside	chr6	61212615	61214270	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356131.1	ENSG00000220030	26628	AL512427.2	ENSG00000287598	270288	None	None
HERVK11_6q11.1	HERV	HERVK11	internal	chr6	61274536	61278498	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356131.1	ENSG00000220030	33225	MTRNR2L9	ENSG00000255633	295830	None	None
HML3_6q11.1a	HERV	HML3	prototype	chr6	61287260	61294257	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTRNR2L9	ENSG00000255633	280071	AL356131.1	ENSG00000220030	45949	None	None
HML3_6q11.1b	HERV	HML3	oneside	chr6	61496710	61497903	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTRNR2L9	ENSG00000255633	76425	AL356131.1	ENSG00000220030	255399	None	None
HERVH_6q11.1a	HERV	HERVH	prototype	chr6	61600186	61606272	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTRNR2L9	ENSG00000255633	25784	KHDRBS2-OT	ENSG00000250686	23961	None	None
ERV316A3_6q11.1	HERV	ERV316A3	prototype	chr6	61620600	61625817	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTRNR2L9	ENSG00000255633	46198	KHDRBS2-OT	ENSG00000250686	4416	None	None
HERVL_6q11.1b	HERV	HERVL	oneside	chr6	62118534	62122755	+	noncoding	KHDRBS2	protein_coding	ANTISENSE	ENSG00000112232	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6q11.1b	HERV	HERVH	prototype	chr6	62585932	62591724	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355375.1	ENSG00000217067	37660	AL355375.2	ENSG00000262566	19429	None	None
ERVL_6q11.1	HERV	ERVL	internal	chr6	62596365	62597249	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355375.1	ENSG00000217067	48093	AL355375.2	ENSG00000262566	13904	None	None
HERVFRD_6q11.2	HERV	HERVFRD	oneside	chr6	62611316	62616160	-	noncoding	AL355375.2	processed_pseudogene	SENSE	ENSG00000262566	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q11.2	HERV	HERVL	oneside	chr6	62649160	62650315	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355375.2	ENSG00000262566	37833	AL450346.1	ENSG00000217477	542757	None	None
MER61_6q11.2	HERV	MER61	internal	chr6	62650316	62651942	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450346.1	ENSG00000217477	541130	AL355375.2	ENSG00000262566	38989	None	None
LTR25_6q11.2	HERV	LTR25	internal	chr6	62652655	62654313	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450346.1	ENSG00000217477	538759	AL355375.2	ENSG00000262566	41328	None	None
HERVH_6q12a	HERV	HERVH	prototype	chr6	62791671	62797450	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355375.2	ENSG00000262566	180344	AL450346.1	ENSG00000217477	395622	None	chr6:62797345-62797392
HERVH_6q12b	HERV	HERVH	prototype	chr6	63005488	63011448	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355375.2	ENSG00000262566	394161	AL450346.1	ENSG00000217477	181624	None	None
HERV9_6q12	HERV	HERV9	prototype	chr6	63077502	63086745	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450346.1	ENSG00000217477	106327	AL355375.2	ENSG00000262566	466175	None	None
HERVL_6q12a	HERV	HERVL	prototype	chr6	63132340	63138823	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450346.1	ENSG00000217477	54249	AL355375.2	ENSG00000262566	521013	None	None
ERV316A3_6q12a	HERV	ERV316A3	oneside	chr6	63236399	63239138	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450346.2	ENSG00000218520	6289	LGSN	ENSG00000146166	36813	None	None
HERVH_6q12c	HERV	HERVH	prototype	chr6	63950227	63956522	+	noncoding	EYS	protein_coding	ANTISENSE	ENSG00000188107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q12a	HERV	ERVLE	internal	chr6	64099147	64099807	+	noncoding	EYS	protein_coding	ANTISENSE	ENSG00000188107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_6q12	HERV	HML5	prototype	chr6	64299000	64304246	+	noncoding	EYS	protein_coding	ANTISENSE	ENSG00000188107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q12b	HERV	ERV316A3	oneside	chr6	64828382	64831186	+	noncoding	EYS	protein_coding	ANTISENSE	ENSG00000188107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q12b	HERV	ERVLE	internal	chr6	64894371	64895302	+	noncoding	EYS	protein_coding	ANTISENSE	ENSG00000188107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_6q12	HERV	HERVW	prototype	chr6	65004992	65011967	+	noncoding	EYS	protein_coding	ANTISENSE	ENSG00000188107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6q12a	HERV	ERVLB4	oneside	chr6	65273291	65278445	+	noncoding	EYS	protein_coding	ANTISENSE	ENSG00000188107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6q12b	HERV	ERVLB4	internal	chr6	65523829	65525451	-	noncoding	EYS	protein_coding	SENSE	ENSG00000188107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q12c	HERV	ERVLE	internal	chr6	65526828	65527972	+	noncoding	EYS	protein_coding	ANTISENSE	ENSG00000188107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6q12d	HERV	HERVH	oneside	chr6	65672768	65673965	-	noncoding	EYS	protein_coding	SENSE	ENSG00000188107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_6q12	HERV	MER34B	oneside	chr6	65939124	65941046	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADH5P4	ENSG00000233859	101085	NUFIP1P1	ENSG00000218890	152385	None	None
HUERSP1_6q12a	HERV	HUERSP1	oneside	chr6	66137454	66138912	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NUFIP1P1	ENSG00000218890	42545	AL450336.1	ENSG00000270521	571330	None	None
MER61_6q12	HERV	MER61	oneside	chr6	66211477	66215054	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NUFIP1P1	ENSG00000218890	116568	AL450336.1	ENSG00000270521	495188	None	None
HERVIP10FH_6q12	HERV	HERVIP10FH	prototype	chr6	66258645	66264857	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NUFIP1P1	ENSG00000218890	163736	AL450336.1	ENSG00000270521	445385	None	chr6:66259048-66259055,chr6:66259299-66259314,chr6:66259323-66259347,chr6:66259361-66259366
ERVLB4_6q12c	HERV	ERVLB4	prototype	chr6	66289303	66291088	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450336.1	ENSG00000270521	419154	NUFIP1P1	ENSG00000218890	194394	None	None
ERV316A3_6q12c	HERV	ERV316A3	internal	chr6	66348717	66350527	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NUFIP1P1	ENSG00000218890	253808	AL450336.1	ENSG00000270521	359715	None	None
HERVL18_6q12a	HERV	HERVL18	prototype	chr6	66478698	66481659	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450336.1	ENSG00000270521	228583	NUFIP1P1	ENSG00000218890	383789	None	None
HUERSP3B_6q12	HERV	HUERSP3B	prototype	chr6	66561896	66569647	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450336.1	ENSG00000270521	140595	NUFIP1P1	ENSG00000218890	466987	None	None
HERVL_6q12b	HERV	HERVL	prototype	chr6	66605123	66607729	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450336.1	ENSG00000270521	102513	NUFIP1P1	ENSG00000218890	510214	None	None
MER101_6q12	HERV	MER101	oneside	chr6	66612093	66618076	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450336.1	ENSG00000270521	92166	NUFIP1P1	ENSG00000218890	517184	chr6:66612419-66612766	None
ERVLE_6q12d	HERV	ERVLE	internal	chr6	66717994	66718803	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450336.1	ENSG00000270521	7167	RNU7-66P	ENSG00000238949	10040	None	None
ERV316A3_6q12d	HERV	ERV316A3	internal	chr6	66725879	66727132	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450336.1	ENSG00000270521	15052	RNU7-66P	ENSG00000238949	1711	None	None
HUERSP3_6q12a	HERV	HUERSP3	oneside	chr6	66923478	66927105	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591004.1	ENSG00000212229	283303	RNU7-66P	ENSG00000238949	194574	None	None
HUERSP3_6q12b	HERV	HUERSP3	oneside	chr6	66927106	66929752	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-66P	ENSG00000238949	198202	AL591004.1	ENSG00000212229	280656	None	None
ERVLE_6q12e	HERV	ERVLE	internal	chr6	66962025	66963672	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-66P	ENSG00000238949	233121	AL591004.1	ENSG00000212229	246736	None	None
ERV316A3_6q12e	HERV	ERV316A3	internal	chr6	67046998	67049342	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591004.1	ENSG00000212229	161066	RNU7-66P	ENSG00000238949	318094	None	chr6:67048453-67048454
ERVLE_6q12f	HERV	ERVLE	internal	chr6	67210631	67213729	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL365503.1	ENSG00000271111	242617	AL591004.1	ENSG00000212229	151	None	None
ERVLE_6q12g	HERV	ERVLE	internal	chr6	67282535	67285152	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL365503.1	ENSG00000271111	171194	AL591004.1	ENSG00000212229	72055	None	None
HERVL18_6q12b	HERV	HERVL18	prototype	chr6	67346018	67349044	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591004.1	ENSG00000212229	135538	AL365503.1	ENSG00000271111	107302	None	None
HUERSP1_6q12b	HERV	HUERSP1	prototype	chr6	67405178	67412893	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591004.1	ENSG00000212229	194698	AL365503.1	ENSG00000271111	43453	None	None
HUERSP2_6q12	HERV	HUERSP2	prototype	chr6	67528883	67533320	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-280P	ENSG00000201015	13331	RNA5SP208	ENSG00000251965	61575	None	None
MER41_6q12	HERV	MER41	internal	chr6	67669775	67674993	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL713998.1	ENSG00000227706	203323	AL049860.1	ENSG00000206672	44311	None	None
MER4B_6q12a	HERV	MER4B	internal	chr6	67683368	67684515	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL713998.1	ENSG00000227706	193801	AL049860.1	ENSG00000206672	57904	None	None
MER4B_6q12b	HERV	MER4B	oneside	chr6	67684527	67691660	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049860.1	ENSG00000206672	59063	AL713998.1	ENSG00000227706	186656	None	None
ERVLB4_6q12d	HERV	ERVLB4	prototype	chr6	67745373	67749048	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049860.1	ENSG00000206672	119909	AL713998.1	ENSG00000227706	129268	None	None
MER4_6q12a	HERV	MER4	oneside	chr6	67857075	67861138	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL713998.1	ENSG00000227706	17178	AL049860.1	ENSG00000206672	231611	None	None
MER4_6q12b	HERV	MER4	insert*	chr6	67861436	67862981	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL713998.1	ENSG00000227706	15335	AL049860.1	ENSG00000206672	235972	None	None
HERVH_6q12e	HERV	HERVH	prototype	chr6	67867628	67874456	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL713998.1	ENSG00000227706	3860	AL049860.1	ENSG00000206672	242164	None	None
HERVH_6q12f	HERV	HERVH	prototype	chr6	67880996	67889473	-	coding	AL713998.1,AL713998.3,AL713998.4	lncRNA,lncRNA,lncRNA	SENSE,ANTISENSE,ANTISENSE	ENSG00000227706,ENSG00000286680,ENSG00000287557	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr6:67881240-67881249,chr6:67881718-67881734,chr6:67881758-67881767,chr6:67881826-67881835,chr6:67882818-67882831,chr6:67883056-67883066,chr6:67883094-67883108,chr6:67883266-67883276,chr6:67883314-67883326,chr6:67883335-67883342,chr6:67883358-67883367,chr6:67883372-67883383,chr6:67883628-67883642,chr6:67883644-67883668,chr6:67883695-67883708,chr6:67883738-67883749,chr6:67883761-67883769,chr6:67883870-67883880,chr6:67883927-67883936,chr6:67884894-67884905,chr6:67884908-67884920,chr6:67885357-67885373,chr6:67885477-67885525,chr6:67885598-67885609,chr6:67885974-67885979,chr6:67886397-67886410,chr6:67886451-67886463,chr6:67886492-67886508,chr6:67886763-67886772,chr6:67886806-67886823,chr6:67886865-67886877,chr6:67886891-67886905,chr6:67886934-67886967,chr6:67887092-67887106,chr6:67887116-67887138,chr6:67887348-67887366,chr6:67887546-67887558,chr6:67887680-67887691,chr6:67887707-67887720,chr6:67888073-67888083,chr6:67888102-67888113,chr6:67888298-67888315,chr6:67888353-67888376,chr6:67888380-67888406,chr6:67888422-67888433,chr6:67888474-67888475,chr6:67888479-67888489,chr6:67888581-67888588,chr6:67888615-67888627,chr6:67888642-67888663,chr6:67888695-67888706,chr6:67888750-67888757,chr6:67888782-67888793,chr6:67889092-67889105,chr6:67889150-67889175,chr6:67883249-67883252,chr6:67886610-67886619
ERV316A3_6q12f	HERV	ERV316A3	prototype	chr6	67976063	67981751	-	noncoding	AL713998.3,AL713998.4	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000286680,ENSG00000287557	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q12g	HERV	ERV316A3	prototype	chr6	67993156	67998715	+	noncoding	AL713998.4	lncRNA	SENSE	ENSG00000287557	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q12c	HERV	HERVL	prototype	chr6	68133929	68141347	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL593844.1	ENSG00000286564	82320	AL646090.2	ENSG00000285838	40928	None	None
HERVL_6q12d	HERV	HERVL	oneside	chr6	68353208	68355649	-	noncoding	AL606923.2	lncRNA	SENSE	ENSG00000288088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q12e	HERV	HERVL	prototype	chr6	68603038	68609733	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL606923.1	ENSG00000218834	4645	AL391807.1	ENSG00000230910	18146	None	None
ERVLE_6q12h	HERV	ERVLE	internal	chr6	68900322	68901031	+	noncoding	ADGRB3	protein_coding	SENSE	ENSG00000135298	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q13a	HERV	HERVL	prototype	chr6	69205969	69210558	-	noncoding	ADGRB3	protein_coding	ANTISENSE	ENSG00000135298	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL32_6q13	HERV	HERVL32	internal	chr6	69615594	69617910	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LMBRD1	ENSG00000168216	54847	ADGRB3	ENSG00000135298	226088	None	None
MER61_6q13a	HERV	MER61	oneside	chr6	69887651	69888518	-	noncoding	COL19A1	protein_coding	ANTISENSE	ENSG00000082293	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_6q13b	HERV	MER61	prototype	chr6	69890795	69895721	-	noncoding	COL19A1	protein_coding	ANTISENSE	ENSG00000082293	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL18_6q13	HERV	HERVL18	oneside	chr6	69902518	69905731	-	noncoding	COL19A1	protein_coding	ANTISENSE	ENSG00000082293	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_6q13	HERV	HML3	prototype	chr6	70445359	70449051	-	noncoding	FAM135A	protein_coding	ANTISENSE	ENSG00000082269	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q13a	HERV	ERVLE	internal	chr6	70563934	70566553	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SDHAF4	ENSG00000154079	364	FAM135A	ENSG00000082269	2760	None	None
ERV316A3_6q13a	HERV	ERV316A3	oneside	chr6	71103669	71105878	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL096709.1	ENSG00000221345	21015	BECN1P2	ENSG00000219669	27294	None	None
HERVH_6q13	HERV	HERVH	prototype	chr6	71748397	71753765	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RIMS1	ENSG00000079841	132938	RNU4-66P	ENSG00000202069	95786	None	None
ERVLE_6q13b	HERV	ERVLE	internal	chr6	71822746	71823397	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RIMS1	ENSG00000079841	63306	RNU4-66P	ENSG00000202069	170135	None	None
MER41_6q13	HERV	MER41	internal	chr6	72144471	72146206	-	noncoding	RIMS1	protein_coding	ANTISENSE	ENSG00000079841	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q13b	HERV	HERVL	prototype	chr6	72187820	72193007	-	noncoding	RIMS1	protein_coding	ANTISENSE	ENSG00000079841	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q13b	HERV	ERV316A3	internal	chr6	73286914	73288329	+	noncoding	KHDC1,AC019205.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000135314,ENSG00000229852	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_6q13	HERV	HERV9	prototype	chr6	73902988	73911215	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CD109	ENSG00000156535	74672	AL590552.1	ENSG00000279790	60131	None	None
ERVLE_6q13c	HERV	ERVLE	internal	chr6	73942340	73943569	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590552.1	ENSG00000279790	27777	CD109	ENSG00000156535	114024	None	None
HERVL_6q13c	HERV	HERVL	oneside	chr6	74146270	74147744	-	noncoding	AL357507.1	lncRNA	ANTISENSE	ENSG00000223786	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q13d	HERV	ERVLE	internal	chr6	74182057	74184216	-	noncoding	AL357507.1	lncRNA	ANTISENSE	ENSG00000223786	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_6q13	HERV	HARLEQUIN	prototype	chr6	74468144	74474614	+	noncoding	AL357507.1	lncRNA	SENSE	ENSG00000223786	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr6:74468775-74468782,chr6:74468789-74468800
HERVL_6q13d	HERV	HERVL	prototype	chr6	74536730	74543402	+	noncoding	AL357507.1,AL356277.3	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000223786,ENSG00000272243	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q13e	HERV	HERVL	oneside	chr6	74555533	74560563	-	noncoding	AL357507.1,AL356277.3	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000223786,ENSG00000272243	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q13f	HERV	HERVL	oneside	chr6	74560564	74562305	+	noncoding	AL357507.1,AL356277.3	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000223786,ENSG00000272243	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6q14.1a	HERV	ERVLB4	oneside	chr6	75513977	75515819	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	H3P27	ENSG00000220730	70303	RPL26P20	ENSG00000219722	13841	None	None
ERVLB4_6q14.1b	HERV	ERVLB4	oneside	chr6	75515857	75521230	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	H3P27	ENSG00000220730	64892	RPL26P20	ENSG00000219722	15721	None	None
MER101_6q14.1a	HERV	MER101	oneside	chr6	75588398	75591397	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1338P	ENSG00000252137	1658	H3P27	ENSG00000220730	1937	None	None
MER101_6q14.1b	HERV	MER101	internal	chr6	75591702	75594878	-	noncoding	RNU6-1338P	snRNA	ANTISENSE	ENSG00000252137	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER61_6q14.1a	HERV	MER61	prototype	chr6	76025941	76031158	+	noncoding	IMPG1	protein_coding	ANTISENSE	ENSG00000112706	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q14.1a	HERV	ERVLE	internal	chr6	76229141	76229997	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-261P	ENSG00000238697	216991	RNU6-248P	ENSG00000222652	136201	None	None
ERVLE_6q14.1b	HERV	ERVLE	internal	chr6	76321790	76322521	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-248P	ENSG00000222652	228850	RNU6-261P	ENSG00000238697	124467	None	None
HERVK11_6q14.1a	HERV	HERVK11	oneside	chr6	76487341	76492036	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02540	ENSG00000236635	29604	RNU6-261P	ENSG00000238697	40252	None	None
HERVK11_6q14.1b	HERV	HERVK11	oneside	chr6	76492103	76496698	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02540	ENSG00000236635	24942	RNU6-261P	ENSG00000238697	45014	None	None
ERVLE_6q14.1c	HERV	ERVLE	internal	chr6	76518418	76519780	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-261P	ENSG00000238697	71329	LINC02540	ENSG00000236635	1860	None	None
ERVLE_6q14.1d	HERV	ERVLE	internal	chr6	76641859	76646227	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590426.1	ENSG00000231762	14259	LINC02540	ENSG00000236635	48038	None	None
ERVLE_6q14.1e	HERV	ERVLE	oneside	chr6	76684905	76689159	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590426.1	ENSG00000231762	22135	AL355612.1	ENSG00000271945	85813	None	None
ERVLE_6q14.1f	HERV	ERVLE	internal	chr6	76781609	76782996	+	noncoding	AL355612.1	lncRNA	SENSE	ENSG00000271945	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_6q14.1	HERV	HUERSP2	prototype	chr6	76988401	76992900	+	noncoding	AL355612.1	lncRNA	SENSE	ENSG00000271945	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER61_6q14.1b	HERV	MER61	prototype	chr6	77094622	77100378	+	noncoding	AL355612.1	lncRNA	SENSE	ENSG00000271945	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q14.1a	HERV	ERV316A3	internal	chr6	77149660	77152315	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355612.1	ENSG00000271945	51872	AL365222.1	ENSG00000276064	191242	None	None
HERVL_6q14.1a	HERV	HERVL	prototype	chr6	77234985	77239787	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355612.1	ENSG00000271945	137197	AL365222.1	ENSG00000276064	103770	None	None
ERVLE_6q14.1g	HERV	ERVLE	internal	chr6	77322889	77326117	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355612.1	ENSG00000271945	225101	AL365222.1	ENSG00000276064	17440	None	None
ERVLE_6q14.1h	HERV	ERVLE	internal	chr6	77356728	77363902	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL365222.1	ENSG00000276064	13074	HTR1B	ENSG00000135312	97851	None	None
ERVLB4_6q14.1c	HERV	ERVLB4	internal	chr6	77364124	77365171	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL365222.1	ENSG00000276064	20470	HTR1B	ENSG00000135312	96582	None	None
HUERSP3_6q14.1	HERV	HUERSP3	prototype	chr6	77504256	77514114	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MEI4	ENSG00000269964	136160	RPS6P7	ENSG00000219253	7585	None	None
HERVL_6q14.1b	HERV	HERVL	prototype	chr6	77591531	77597490	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MEI4	ENSG00000269964	52784	RPS6P7	ENSG00000219253	94860	None	None
HERVH_6q14.1a	HERV	HERVH	prototype	chr6	77658021	77666441	-	coding	MEI4	protein_coding	ANTISENSE	ENSG00000269964	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_6q14.1	HERV	HML2	prototype	chr6	77716945	77726366	-	coding	MEI4	protein_coding	ANTISENSE	ENSG00000269964	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q14.1i	HERV	ERVLE	internal	chr6	77825959	77826964	-	noncoding	MEI4	protein_coding	ANTISENSE	ENSG00000269964	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q14.1j	HERV	ERVLE	internal	chr6	77940410	77942419	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121718.1	ENSG00000230309	662048	MEI4	ENSG00000269964	13382	None	None
ERV316A3_6q14.1b	HERV	ERV316A3	internal	chr6	78053330	78054727	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121718.1	ENSG00000230309	549740	MEI4	ENSG00000269964	126302	None	None
HERVL_6q14.1c	HERV	HERVL	oneside	chr6	78098970	78100473	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121718.1	ENSG00000230309	503994	MEI4	ENSG00000269964	171942	None	None
HML5_6q14.1	HERV	HML5	prototype	chr6	78132473	78140711	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MEI4	ENSG00000269964	205445	AL121718.1	ENSG00000230309	463756	None	None
ERV316A3_6q14.1c	HERV	ERV316A3	internal	chr6	78341956	78343451	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MEI4	ENSG00000269964	414928	AL121718.1	ENSG00000230309	261016	None	None
HERVH_6q14.1b	HERV	HERVH	oneside	chr6	78585675	78588109	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MEI4	ENSG00000269964	658647	AL121718.1	ENSG00000230309	16358	None	None
MER61_6q14.1c	HERV	MER61	oneside	chr6	78673776	78675966	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450327.1	ENSG00000229495	133749	AL121718.1	ENSG00000230309	67740	None	None
HML1_6q14.1	HERV	HML1	prototype	chr6	78854118	78858747	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450327.1	ENSG00000229495	40815	IRAK1BP1	ENSG00000146243	8804	None	None
MER41_6q14.1a	HERV	MER41	oneside	chr6	79257432	79258797	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355796.1	ENSG00000220154	19308	HMGN3-AS1	ENSG00000270362	20635	None	None
MER41_6q14.1b	HERV	MER41	oneside	chr6	79262321	79264710	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355796.1	ENSG00000220154	13395	HMGN3-AS1	ENSG00000270362	25524	None	None
HERVL18_6q14.1	HERV	HERVL18	prototype	chr6	79307594	79313548	-	noncoding	LCAL1	lncRNA	SENSE	ENSG00000286042	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr6:79313328-79313350,chr6:79313359-79313377,chr6:79313384-79313395
ERV316A3_6q14.1d	HERV	ERV316A3	internal	chr6	79381052	79381557	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL078601.2	ENSG00000262048	24683	AL078601.1	ENSG00000218029	26339	None	None
HERVP71A_6q14.1	HERV	HERVP71A	oneside	chr6	79525295	79529614	+	noncoding	AL391840.1,LCA5	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000231533,ENSG00000135338	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q14.1k	HERV	ERVLE	internal	chr6	79903569	79911124	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOVL4	ENSG00000118402	3690	AL132875.2	ENSG00000233835	28959	None	None
HERV4_6q14.1	HERV	HERV4	internal	chr6	80110316	80111546	-	noncoding	BCKDHB	protein_coding	ANTISENSE	ENSG00000083123	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6q14.1c	HERV	MER41	oneside	chr6	80290637	80292242	-	noncoding	BCKDHB	protein_coding	ANTISENSE	ENSG00000083123	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6q14.1d	HERV	MER41	oneside	chr6	80295580	80299563	-	noncoding	BCKDHB	protein_coding	ANTISENSE	ENSG00000083123	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q14.1d	HERV	HERVL	prototype	chr6	80384055	80391236	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL17P25	ENSG00000219547	9486	AL359715.4	ENSG00000279022	49494	None	None
HERVH_6q14.1c	HERV	HERVH	prototype	chr6	80482838	80487823	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL596028.1	ENSG00000181705	11373	RPSAP72	ENSG00000219361	12410	chr6:80487793-80487939	chr6:80484343-80484375
HERVH_6q14.1d	HERV	HERVH	prototype	chr6	80509796	80515803	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590824.1	ENSG00000216352	40038	AL596028.1	ENSG00000181705	10404	chr6:80509584-80509970,chr6:80513695-80513880	None
HERVH_6q14.1e	HERV	HERVH	prototype	chr6	80647676	80653384	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TENT5A	ENSG00000112773	838055	AL590824.1	ENSG00000216352	90487	None	None
ERVLE_6q14.1l	HERV	ERVLE	internal	chr6	80813145	80816045	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TENT5A	ENSG00000112773	675394	AL590824.1	ENSG00000216352	255956	None	None
MER61_6q14.1d	HERV	MER61	oneside	chr6	81058231	81062145	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TENT5A	ENSG00000112773	429294	AL590824.1	ENSG00000216352	501042	None	chr6:81059353-81059356
MER61_6q14.1e	HERV	MER61	oneside	chr6	81062248	81064912	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TENT5A	ENSG00000112773	426527	AL590824.1	ENSG00000216352	505059	None	None
HERVW_6q14.1	HERV	HERVW	prototype	chr6	81336946	81343927	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590824.1	ENSG00000216352	779757	TENT5A	ENSG00000112773	147512	None	None
HERVH_6q14.1f	HERV	HERVH	prototype	chr6	81343928	81351160	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TENT5A	ENSG00000112773	140279	AL590824.1	ENSG00000216352	786739	None	None
ERV316A3_6q14.1e	HERV	ERV316A3	oneside	chr6	81475199	81480616	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TENT5A	ENSG00000112773	10823	AL590824.1	ENSG00000216352	918010	None	None
HERVL_6q14.1e	HERV	HERVL	prototype	chr6	81883049	81889558	-	noncoding	LINC02542	lncRNA	SENSE	ENSG00000226453	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_6q14.1f	HERV	MER61	oneside	chr6	82484093	82486142	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TPBG	ENSG00000146242	113265	UBE3D	ENSG00000118420	406248	None	None
MER41_6q14.1e	HERV	MER41	internal	chr6	82486253	82490066	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TPBG	ENSG00000146242	115425	UBE3D	ENSG00000118420	402324	None	None
HERVL40_6q14.1	HERV	HERVL40	internal	chr6	82589524	82592655	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TPBG	ENSG00000146242	218696	UBE3D	ENSG00000118420	299735	None	None
ERVLB4_6q14.1d	HERV	ERVLB4	internal	chr6	82859393	82863077	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TPBG	ENSG00000146242	488565	UBE3D	ENSG00000118420	29313	None	None
HERVL_6q14.1f	HERV	HERVL	prototype	chr6	83010538	83017105	-	noncoding	UBE3D	protein_coding	SENSE	ENSG00000118420	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6q14.1e	HERV	ERVLB4	internal	chr6	83024412	83025187	-	noncoding	UBE3D	protein_coding	SENSE	ENSG00000118420	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q14.1m	HERV	ERVLE	internal	chr6	83199292	83202847	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ME1	ENSG00000065833	7555	RWDD2A	ENSG00000013392	357	None	None
ERV316A3_6q14.2	HERV	ERV316A3	oneside	chr6	83310141	83312525	+	noncoding	ME1	protein_coding	ANTISENSE	ENSG00000065833	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q14.2	HERV	HERVL	prototype	chr6	83357517	83364446	+	noncoding	ME1	protein_coding	ANTISENSE	ENSG00000065833	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6q14.2	HERV	ERVLB4	internal	chr6	83401633	83403265	+	noncoding	ME1	protein_coding	ANTISENSE	ENSG00000065833	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_6q14.2	HERV	HERVW	prototype	chr6	83443760	83450390	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ME1	ENSG00000065833	12709	PRSS35	ENSG00000146250	62144	None	None
ERVLE_6q14.2	HERV	ERVLE	internal	chr6	83654450	83656661	+	noncoding	SNAP91	protein_coding	ANTISENSE	ENSG00000065609	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_6q14.2	HERV	MER4	oneside	chr6	83969147	83975641	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL034347.1	ENSG00000228679	8087	CYB5R4	ENSG00000065615	1724	None	None
ERVL_6q14.2	HERV	ERVL	internal	chr6	84105602	84107924	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CEP162	ENSG00000135315	16317	MRAP2	ENSG00000135324	14721	None	None
MER34B_6q14.2	HERV	MER34B	oneside	chr6	84142173	84146359	+	noncoding	CEP162	protein_coding	ANTISENSE	ENSG00000135315	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q14.3a	HERV	ERVLE	internal	chr6	84233268	84235206	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CEP162	ENSG00000135315	5625	LINC01611	ENSG00000231776	185822	None	None
ERV316A3_6q14.3a	HERV	ERV316A3	internal	chr6	84235212	84236368	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CEP162	ENSG00000135315	7569	LINC01611	ENSG00000231776	184660	None	None
ERV316A3_6q14.3b	HERV	ERV316A3	oneside	chr6	84240138	84242945	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CEP162	ENSG00000135315	12495	LINC01611	ENSG00000231776	178083	None	None
ERVLE_6q14.3b	HERV	ERVLE	internal	chr6	84574439	84576675	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01611	ENSG00000231776	18287	TBX18	ENSG00000112837	110676	None	None
HERVW_6q14.3a	HERV	HERVW	oneside	chr6	84711702	84718373	-	noncoding	TBX18	protein_coding	SENSE	ENSG00000112837	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_6q14.3	HERV	HERVIP10FH	internal	chr6	84718364	84720411	-	noncoding	TBX18	protein_coding	SENSE	ENSG00000112837	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q14.3c	HERV	ERVLE	internal	chr6	84792164	84795163	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL035694.1	ENSG00000287294	21945	AL109941.1	ENSG00000216523	171234	None	None
ERV316A3_6q14.3c	HERV	ERV316A3	internal	chr6	84799340	84801555	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL109941.1	ENSG00000216523	164842	AL035694.1	ENSG00000287294	29121	None	None
HERVIP10F_6q14.3	HERV	HERVIP10F	oneside	chr6	84962838	84965541	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL109941.1	ENSG00000216523	856	AL035694.1	ENSG00000287294	192619	None	None
HERVI_6q14.3	HERV	HERVI	oneside	chr6	84965610	84968599	-	noncoding	AL109941.1	processed_pseudogene	SENSE	ENSG00000216523	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV9_6q14.3a	HERV	HERV9	oneside	chr6	85092945	85096349	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL109941.1	ENSG00000216523	126320	AL139806.1	ENSG00000220291	59318	None	None
MER4_6q14.3a	HERV	MER4	prototype	chr6	85721586	85730983	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355615.2	ENSG00000217334	388	SNHG5	ENSG00000203875	42654	None	None
MER34B_6q14.3	HERV	MER34B	internal	chr6	85747738	85750149	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU4-72P	ENSG00000222686	1432	SMIM11P1	ENSG00000198738	11817	None	None
HERV3_6q14.3a	HERV	HERV3	oneside	chr6	85854583	85857237	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450338.1	ENSG00000218766	11716	AL355615.1	ENSG00000200427	76828	None	None
HERV3_6q14.3b	HERV	HERV3	oneside	chr6	85863519	85867947	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450338.1	ENSG00000218766	1006	AL355615.1	ENSG00000200427	85764	None	None
MER4_6q14.3b	HERV	MER4	oneside	chr6	85897132	85899666	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450338.1	ENSG00000218766	27668	AL450338.2	ENSG00000288021	50024	None	None
ERVLE_6q14.3d	HERV	ERVLE	prototype	chr6	85915038	85921375	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450338.1	ENSG00000218766	45574	AL450338.2	ENSG00000288021	28315	None	None
HERVW_6q14.3b	HERV	HERVW	internal	chr6	85973857	85975559	-	noncoding	AL450338.2	lncRNA	ANTISENSE	ENSG00000288021	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_6q14.3	HERV	HUERSP2	prototype	chr6	86147971	86152987	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049545.1	ENSG00000217272	17460	RPL7P27	ENSG00000220069	60837	None	None
ERVLB4_6q14.3	HERV	ERVLB4	oneside	chr6	86205907	86209148	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFA5P9	ENSG00000220831	5089	AL049545.1	ENSG00000217272	34889	None	None
ERVLE_6q14.3e	HERV	ERVLE	internal	chr6	86411453	86413549	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFA5P9	ENSG00000220831	196877	AL391417.1	ENSG00000219500	18695	None	None
HERVS71_6q14.3	HERV	HERVS71	prototype	chr6	86473027	86481664	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL643P	ENSG00000243124	36889	AL353133.1	ENSG00000218561	248044	None	chr6:86473691-86473692
ERV316A3_6q14.3d	HERV	ERV316A3	prototype	chr6	86487105	86490539	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL643P	ENSG00000243124	50967	AL353133.1	ENSG00000218561	239169	None	None
HML5_6q14.3	HERV	HML5	oneside	chr6	86498313	86502807	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353133.1	ENSG00000218561	226901	RN7SL643P	ENSG00000243124	62175	None	None
ERVLE_6q14.3f	HERV	ERVLE	internal	chr6	86531849	86532707	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL353133.1	ENSG00000218561	197001	RN7SL643P	ENSG00000243124	95711	None	None
HERVH_6q14.3	HERV	HERVH	prototype	chr6	86598258	86603901	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353133.1	ENSG00000218561	125807	RN7SL643P	ENSG00000243124	162120	None	None
HERV9_6q14.3b	HERV	HERV9	prototype	chr6	86671699	86681550	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353133.1	ENSG00000218561	48158	RN7SL643P	ENSG00000243124	235561	None	chr6:86681247-86681255
ERV316A3_6q14.3e	HERV	ERV316A3	prototype	chr6	86739089	86744439	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353133.2	ENSG00000219190	24083	AL353133.1	ENSG00000218561	8981	chr6:86739101-86739158	None
MER101_6q14.3	HERV	MER101	oneside	chr6	87110512	87115797	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CGA	ENSG00000135346	15106	RCN1P1	ENSG00000215477	5896	None	None
HERVIP10F_6q15	HERV	HERVIP10F	oneside	chr6	87478736	87480702	-	noncoding	AL049697.1,SLC35A1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000213204,ENSG00000164414	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_6q15a	HERV	HERVIP10FH	oneside	chr6	87480750	87484871	-	noncoding	AL049697.1,SLC35A1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000213204,ENSG00000164414	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q15a	HERV	ERVLE	internal	chr6	87780085	87783101	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133211.1	ENSG00000238628	59067	AL138919.1	ENSG00000207131	43072	None	None
HERVL40_6q15	HERV	HERVL40	oneside	chr6	88012261	88017679	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590392.1	ENSG00000271114	120392	AL136096.1	ENSG00000286278	29377	None	None
HERVW_6q15	HERV	HERVW	prototype	chr6	88414193	88421507	-	noncoding	AL139042.1	lncRNA	SENSE	ENSG00000234426	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVE_6q15	HERV	HERVE	prototype	chr6	88662199	88670950	+	coding	RNGTT	protein_coding	ANTISENSE	ENSG00000111880	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr6:88662482-88662487,chr6:88662574-88662575
HERVIP10FH_6q15b	HERV	HERVIP10FH	prototype	chr6	88724676	88730582	+	noncoding	RNGTT	protein_coding	ANTISENSE	ENSG00000111880	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6q15a	HERV	ERVLB4	internal	chr6	88746280	88747312	+	noncoding	RNGTT	protein_coding	ANTISENSE	ENSG00000111880	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q15b	HERV	ERVLE	internal	chr6	88762003	88764029	+	noncoding	RNGTT	protein_coding	ANTISENSE	ENSG00000111880	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_6q15	HERV	MER61	prototype	chr6	88965821	88972938	+	noncoding	AL079342.3	TEC	SENSE	ENSG00000280277	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q15a	HERV	ERV316A3	oneside	chr6	89543388	89545528	-	noncoding	ANKRD6	protein_coding	ANTISENSE	ENSG00000135299	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q15c	HERV	ERVLE	internal	chr6	89880684	89884610	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353692.3	ENSG00000219240	1546	RPL22P14	ENSG00000218300	3806	None	None
ERVLB4_6q15b	HERV	ERVLB4	oneside	chr6	90337021	90338480	+	noncoding	AL132996.1	lncRNA	SENSE	ENSG00000260271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_6q15	HERV	ERVL	oneside	chr6	90338475	90340237	+	noncoding	AL132996.1	lncRNA	SENSE	ENSG00000260271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q15b	HERV	ERV316A3	internal	chr6	90417070	90420287	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAP3K7	ENSG00000135341	93286	AL132996.1	ENSG00000260271	53158	None	None
HERVH_6q15	HERV	HERVH	prototype	chr6	90670205	90675442	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL080284.1	ENSG00000224605	714871	MAP3K7	ENSG00000135341	83133	None	None
HERVL_6q15	HERV	HERVL	prototype	chr6	91362321	91364772	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAP3K7	ENSG00000135341	775249	AL080284.1	ENSG00000224605	25541	None	None
MER41_6q15	HERV	MER41	internal	chr6	92198236	92201341	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590814.2	ENSG00000285961	18080	AL133457.1	ENSG00000261038	186500	None	None
ERVLB4_6q15c	HERV	ERVLB4	internal	chr6	92263279	92263885	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590814.2	ENSG00000285961	83123	AL133457.1	ENSG00000261038	123956	None	None
ERVLE_6q15d	HERV	ERVLE	internal	chr6	92264218	92265117	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590814.2	ENSG00000285961	84062	AL133457.1	ENSG00000261038	122724	None	None
HERVL40_6q16.1a	HERV	HERVL40	oneside	chr6	92800175	92802383	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATF1P1	ENSG00000219387	84868	AL589947.1	ENSG00000221455	9510	None	None
MER4_6q16.1a	HERV	MER4	oneside	chr6	92825403	92826892	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589947.1	ENSG00000221455	34738	ATF1P1	ENSG00000219387	60359	None	None
MER4B_6q16.1	HERV	MER4B	internal	chr6	92826950	92829394	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589947.1	ENSG00000221455	36285	ATF1P1	ENSG00000219387	57857	None	None
MER4_6q16.1b	HERV	MER4	oneside	chr6	92829906	92833365	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589947.1	ENSG00000221455	39241	ATF1P1	ENSG00000219387	53886	None	None
HERVL32_6q16.1	HERV	HERVL32	prototype	chr6	92936553	92938404	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138731.1	ENSG00000235099	131983	ATF1P1	ENSG00000219387	47972	None	None
HML3_6q16.1	HERV	HML3	oneside	chr6	93198190	93199902	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EPHA7	ENSG00000135333	40118	AL138731.1	ENSG00000235099	94806	None	None
ERVL_6q16.1a	HERV	ERVL	oneside	chr6	93659300	93661187	+	noncoding	AL591519.1	lncRNA	SENSE	ENSG00000287683	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q16.1a	HERV	HERVL	prototype	chr6	93660605	93667860	+	noncoding	AL591519.1	lncRNA	SENSE	ENSG00000287683	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6q16.1a	HERV	ERVLB4	internal	chr6	93674287	93675066	+	noncoding	AL591519.1	lncRNA	SENSE	ENSG00000287683	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_6q16.1b	HERV	HERVL40	prototype	chr6	93690585	93696772	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356094.2	ENSG00000288085	23391	AL591519.1	ENSG00000287683	12631	None	None
ERVL_6q16.1b	HERV	ERVL	internal	chr6	93719201	93720026	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591519.1	ENSG00000287683	41247	AL356094.2	ENSG00000288085	137	None	None
HERVH_6q16.1a	HERV	HERVH	prototype	chr6	93830156	93835749	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL391336.2	ENSG00000252249	43357	AL356094.1	ENSG00000280451	17120	chr6:93835365-93835747	None
ERV316A3_6q16.1a	HERV	ERV316A3	oneside	chr6	93837870	93842822	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356094.1	ENSG00000280451	24834	AL391336.2	ENSG00000252249	36284	None	None
ERVLB4_6q16.1b	HERV	ERVLB4	oneside	chr6	94097072	94101655	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL391336.1	ENSG00000229600	207662	AL157378.1	ENSG00000231143	62265	None	None
ERV316A3_6q16.1b	HERV	ERV316A3	oneside	chr6	94107416	94109509	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL157378.1	ENSG00000231143	54411	AL391336.1	ENSG00000229600	218006	None	None
HERVH_6q16.1b	HERV	HERVH	prototype	chr6	94553919	94559610	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYCSP17	ENSG00000219627	944572	MTCYBP36	ENSG00000216853	106740	None	chr6:94558569-94558577
HERVL_6q16.1b	HERV	HERVL	oneside	chr6	95197396	95198340	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CYCSP17	ENSG00000219627	305842	MTCYBP36	ENSG00000216853	750217	None	None
HUERSP2_6q16.1	HERV	HUERSP2	prototype	chr6	95258909	95263868	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYCSP17	ENSG00000219627	240314	MTCYBP36	ENSG00000216853	811730	None	None
HERVL40_6q16.1c	HERV	HERVL40	internal	chr6	95417841	95419170	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCYBP36	ENSG00000216853	970662	CYCSP17	ENSG00000219627	85012	None	None
MER101_6q16.1	HERV	MER101	internal	chr6	95523292	95525381	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYCSP17	ENSG00000219627	18796	MANEA-DT	ENSG00000261366	49802	None	chr6:95524846-95524853
MER4_6q16.1c	HERV	MER4	internal	chr6	95639371	95642000	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL607077.1	ENSG00000219549	6442	AL034348.1	ENSG00000287578	275143	None	None
HERVL74_6q16.1	HERV	HERVL74	oneside	chr6	95769028	95770798	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL607077.1	ENSG00000219549	136099	AL034348.1	ENSG00000287578	146345	None	None
HERVL40_6q16.1d	HERV	HERVL40	oneside	chr6	95839859	95842098	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL607077.1	ENSG00000219549	206930	AL034348.1	ENSG00000287578	75045	None	None
HERVL40_6q16.1e	HERV	HERVL40	oneside	chr6	96022613	96026191	-	noncoding	FUT9	protein_coding	ANTISENSE	ENSG00000172461	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_6q16.1	HERV	HUERSP1	prototype	chr6	96403311	96409458	+	noncoding	UFL1-AS1	lncRNA	ANTISENSE	ENSG00000233797	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q16.1a	HERV	ERVLE	internal	chr6	96454836	96457626	+	noncoding	UFL1-AS1	lncRNA	ANTISENSE	ENSG00000233797	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q16.1c	HERV	ERV316A3	internal	chr6	96459409	96460877	+	noncoding	UFL1-AS1	lncRNA	ANTISENSE	ENSG00000233797	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q16.1b	HERV	ERVLE	internal	chr6	96667762	96669074	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TYMSP1	ENSG00000219139	13620	AL355143.1	ENSG00000217331	3055	None	None
ERVLB4_6q16.1c	HERV	ERVLB4	oneside	chr6	96701112	96705067	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355143.1	ENSG00000217331	28143	EEF1GP6	ENSG00000216518	45757	None	None
ERVLE_6q16.1c	HERV	ERVLE	internal	chr6	96805587	96807500	+	noncoding	GPR63	protein_coding	ANTISENSE	ENSG00000112218	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q16.1d	HERV	ERVLE	internal	chr6	96853744	96855659	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFAF4	ENSG00000123545	33656	GPR63	ENSG00000112218	16267	None	None
ERVL_6q16.1c	HERV	ERVL	internal	chr6	97422878	97424711	-	noncoding	AL589740.1	lncRNA	ANTISENSE	ENSG00000271860	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q16.1d	HERV	ERV316A3	oneside	chr6	97724841	97725981	+	noncoding	AL589740.1	lncRNA	SENSE	ENSG00000271860	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6q16.1c	HERV	HERVH	prototype	chr6	97779488	97785325	+	noncoding	AL589740.1	lncRNA	SENSE	ENSG00000271860	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q16.1e	HERV	ERV316A3	oneside	chr6	98091032	98092646	-	noncoding	AL589740.1	lncRNA	ANTISENSE	ENSG00000271860	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q16.1c	HERV	HERVL	prototype	chr6	98166615	98173383	+	noncoding	AL589740.1	lncRNA	SENSE	ENSG00000271860	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_6q16.1d	HERV	ERVL	prototype	chr6	98403875	98410975	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589826.1	ENSG00000187472	369282	AL589740.1	ENSG00000271860	3006	None	None
HERVL18_6q16.1	HERV	HERVL18	prototype	chr6	98529439	98532477	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589740.1	ENSG00000271860	128570	AL589826.1	ENSG00000187472	247780	None	None
ERVLE_6q16.1e	HERV	ERVLE	internal	chr6	98818520	98820608	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589826.1	ENSG00000187472	38015	AL589826.2	ENSG00000283010	9359	None	None
ERVLB4_6q16.1d	HERV	ERVLB4	oneside	chr6	98857266	98859501	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FBXL4	ENSG00000112234	9034	POU3F2	ENSG00000184486	17808	None	None
HERVL18_6q16.2	HERV	HERVL18	prototype	chr6	99019305	99026450	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL078603.1	ENSG00000271042	55999	FBXL4	ENSG00000112234	71299	None	None
ERV316A3_6q16.2	HERV	ERV316A3	oneside	chr6	99070246	99072679	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FBXL4	ENSG00000112234	122240	AL078603.1	ENSG00000271042	9770	None	None
HUERSP2_6q16.2	HERV	HUERSP2	oneside	chr6	99251899	99255590	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BDH2P1	ENSG00000232699	76420	FAXC	ENSG00000146267	15578	None	None
MER101_6q16.3	HERV	MER101	internal	chr6	100015355	100017629	+	noncoding	MCHR2-AS1	lncRNA	SENSE	ENSG00000229315	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVL_6q16.3a	HERV	ERVL	internal	chr6	100618295	100619992	+	noncoding	ASCC3	protein_coding	ANTISENSE	ENSG00000112249	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_6q16.3a	HERV	MER61	prototype	chr6	100892202	100899631	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133338.2	ENSG00000270987	1864	GRIK2	ENSG00000164418	281626	None	None
HML5_6q16.3	HERV	HML5	prototype	chr6	100944545	100952375	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133338.2	ENSG00000270987	54207	GRIK2	ENSG00000164418	228882	None	None
MER61_6q16.3b	HERV	MER61	internal	chr6	101024666	101027931	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133338.2	ENSG00000270987	134328	GRIK2	ENSG00000164418	153326	None	None
MER61_6q16.3c	HERV	MER61	oneside	chr6	101031468	101033027	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133338.2	ENSG00000270987	141130	GRIK2	ENSG00000164418	148230	None	None
ERV316A3_6q16.3a	HERV	ERV316A3	internal	chr6	101181883	101182486	-	noncoding	GRIK2	protein_coding	ANTISENSE	ENSG00000164418	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_6q16.3	HERV	HERVE	prototype	chr6	101224789	101231704	-	noncoding	GRIK2	protein_coding	ANTISENSE	ENSG00000164418	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6q16.3a	HERV	HERVH	prototype	chr6	102102425	102108211	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002530.1	ENSG00000218536	22870	AL357139.2	ENSG00000287499	242060	None	None
ERV316A3_6q16.3b	HERV	ERV316A3	prototype	chr6	102257665	102261073	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357139.2	ENSG00000287499	89198	AP002530.1	ENSG00000218536	178110	None	None
HERVH_6q16.3b	HERV	HERVH	prototype	chr6	102292727	102297331	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002530.1	ENSG00000218536	213172	AL357139.2	ENSG00000287499	52940	None	None
MER61_6q16.3d	HERV	MER61	prototype	chr6	102352540	102356395	-	noncoding	AL357139.2	lncRNA	SENSE	ENSG00000287499	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV4_6q16.3a	HERV	HERV4	prototype	chr6	102613573	102618161	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357139.1	ENSG00000219757	159781	Z98755.1	ENSG00000217120	384353	None	None
ERVL_6q16.3b	HERV	ERVL	internal	chr6	102618171	102619160	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357139.1	ENSG00000219757	164379	Z98755.1	ENSG00000217120	383354	None	None
HERV4_6q16.3b	HERV	HERV4	oneside	chr6	102631291	102632925	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357139.1	ENSG00000219757	177499	Z98755.1	ENSG00000217120	369589	None	None
HERVL_6q16.3a	HERV	HERVL	prototype	chr6	102870322	102877478	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357139.1	ENSG00000219757	416530	Z98755.1	ENSG00000217120	125036	None	None
ERVL_6q16.3c	HERV	ERVL	oneside	chr6	103116379	103117504	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z98755.1	ENSG00000217120	112482	AL591387.1	ENSG00000202283	465631	None	None
MER4_6q16.3	HERV	MER4	internal	chr6	103280286	103281531	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z98755.1	ENSG00000217120	276389	AL591387.1	ENSG00000202283	301604	None	None
MER61_6q16.3e	HERV	MER61	prototype	chr6	103877395	103880051	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590608.1	ENSG00000288084	2708	R3HDM2P2	ENSG00000216817	137582	None	None
HERVL_6q16.3b	HERV	HERVL	prototype	chr6	104079207	104085494	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPM1P10	ENSG00000214428	52444	AL357522.1	ENSG00000287616	401601	None	None
HERVL_6q21a	HERV	HERVL	prototype	chr6	105216165	105223201	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PREP	ENSG00000085377	50019	POPDC3	ENSG00000132429	36151	None	None
ERV316A3_6q21a	HERV	ERV316A3	oneside	chr6	105450678	105451787	+	noncoding	PREP,AL096794.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000085377,ENSG00000286084	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6q21a	HERV	ERVLB4	internal	chr6	105655131	105657166	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02836	ENSG00000237567	22835	Z97206.1	ENSG00000219088	9160	None	None
HERVW_6q21a	HERV	HERVW	prototype	chr6	106228137	106235814	+	noncoding	ATG5	protein_coding	ANTISENSE	ENSG00000057663	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_6q21	HERV	MER101	internal	chr6	106837265	106839633	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02532	ENSG00000235142	49117	CD24	ENSG00000272398	130198	None	None
ERVLB4_6q21b	HERV	ERVLB4	internal	chr6	106965887	106968539	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02532	ENSG00000235142	177739	CD24	ENSG00000272398	1292	None	None
PABLA_6q21	HERV	PABLA	internal	chr6	107000767	107003574	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CD24	ENSG00000272398	25140	MTRES1	ENSG00000130349	24625	None	None
HERVW_6q21b	HERV	HERVW	oneside	chr6	107299413	107300743	+	noncoding	PDSS2	protein_coding	ANTISENSE	ENSG00000164494	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q21a	HERV	ERVLE	internal	chr6	107437877	107440702	+	noncoding	PDSS2	protein_coding	ANTISENSE	ENSG00000164494	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q21b	HERV	ERVLE	internal	chr6	107684799	107685463	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SOBP	ENSG00000112320	23493	AL096816.1	ENSG00000280135	11836	None	None
ERVL_6q21	HERV	ERVL	oneside	chr6	108087035	108088799	+	noncoding	OSTM1	protein_coding	ANTISENSE	ENSG00000081087	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6q21a	HERV	MER41	oneside	chr6	108301121	108302964	-	noncoding	AFG1L	protein_coding	ANTISENSE	ENSG00000135537	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q21c	HERV	ERVLE	internal	chr6	109356416	109361483	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC162P	ENSG00000203799	1353	CD164	ENSG00000135535	5031	None	None
ERVLB4_6q21c	HERV	ERVLB4	internal	chr6	109685861	109688604	+	noncoding	AK9	protein_coding	ANTISENSE	ENSG00000155085	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q21b	HERV	ERV316A3	oneside	chr6	109688599	109689756	+	noncoding	AK9	protein_coding	ANTISENSE	ENSG00000155085	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q21b	HERV	HERVL	oneside	chr6	109849277	109852558	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL512303.1	ENSG00000232311	20492	GPR6	ENSG00000146360	125698	None	None
HERVH_6q21a	HERV	HERVH	prototype	chr6	109855775	109861579	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GPR6	ENSG00000146360	116677	AL512303.1	ENSG00000232311	26990	None	None
MER61_6q21	HERV	MER61	oneside	chr6	109876944	109882777	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL512303.1	ENSG00000232311	48159	GPR6	ENSG00000146360	95479	None	None
HERV3_6q21	HERV	HERV3	prototype	chr6	109886705	109894640	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GPR6	ENSG00000146360	83616	AL512303.1	ENSG00000232311	57920	chr6:109894426-109894679	None
ERV316A3_6q21c	HERV	ERV316A3	oneside	chr6	110091041	110092078	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590009.1	ENSG00000286691	50800	WASF1	ENSG00000112290	7741	None	None
MER41_6q21b	HERV	MER41	oneside	chr6	110488048	110491199	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC002464.1	ENSG00000260188	8612	AL512430.3	ENSG00000219559	70976	None	None
HML3_6q21a	HERV	HML3	prototype	chr6	110499174	110506068	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC002464.1	ENSG00000260188	19738	AL512430.3	ENSG00000219559	56107	None	None
MER34B_6q21	HERV	MER34B	internal	chr6	110581133	110582977	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512430.3	ENSG00000219559	18518	AL512430.4	ENSG00000270934	15116	None	None
HML3_6q21b	HERV	HML3	prototype	chr6	110916754	110923087	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AMD1	ENSG00000123505	17875	AL357515.1	ENSG00000219329	479	None	None
HERVW_6q21c	HERV	HERVW	prototype	chr6	111131018	111138073	+	noncoding	SLC16A10	protein_coding	SENSE	ENSG00000112394	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_6q21	HERV	LTR25	internal	chr6	111161463	111166352	-	noncoding	SLC16A10	protein_coding	ANTISENSE	ENSG00000112394	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_6q21	HERV	HARLEQUIN	prototype	chr6	111284171	111290629	-	noncoding	MFSD4B	protein_coding	ANTISENSE	ENSG00000173214	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q21c	HERV	HERVL	oneside	chr6	111916163	111917846	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCN6	ENSG00000112761	136226	LINC02527	ENSG00000227012	6743	None	None
ERV316A3_6q21d	HERV	ERV316A3	internal	chr6	112005510	112006924	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCN6	ENSG00000112761	47148	LINC02527	ENSG00000227012	96090	None	None
HML3_6q21c	HERV	HML3	prototype	chr6	113263409	113268482	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL589684.1	ENSG00000223811	88521	SOCS5P5	ENSG00000216904	39337	None	None
HERVH_6q21b	HERV	HERVH	prototype	chr6	114011775	114018145	-	noncoding	HDAC2-AS2	lncRNA	ANTISENSE	ENSG00000228624	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6q22.1a	HERV	HERVH	prototype	chr6	114422369	114428297	-	noncoding	HDAC2-AS2	lncRNA	ANTISENSE	ENSG00000228624	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr6:114427123-114427173
ERV316A3_6q22.1a	HERV	ERV316A3	prototype	chr6	114651846	114653791	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138830.1	ENSG00000226079	106511	AL590550.1	ENSG00000287097	169203	None	None
HERVW_6q22.1	HERV	HERVW	internal	chr6	114998386	115001839	+	noncoding	AL590550.1	lncRNA	SENSE	ENSG00000287097	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_6q22.1b	HERV	HERVH	prototype	chr6	115031793	115037619	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590550.1	ENSG00000287097	29513	AL606845.1	ENSG00000219619	320879	None	None
HERV9_6q22.1	HERV	HERV9	prototype	chr6	115231642	115241401	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL606845.1	ENSG00000219619	117097	AL590550.1	ENSG00000287097	229362	None	None
ERVLE_6q22.1a	HERV	ERVLE	internal	chr6	115719259	115720275	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02534	ENSG00000228777	75343	FRK	ENSG00000111816	210874	None	None
ERVLE_6q22.1b	HERV	ERVLE	internal	chr6	116999283	117001133	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS29P13	ENSG00000217089	47537	RFX6	ENSG00000185002	67122	None	None
ERVLE_6q22.1c	HERV	ERVLE	internal	chr6	117029557	117034366	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RFX6	ENSG00000185002	97396	RPS29P13	ENSG00000217089	14304	None	None
ERV316A3_6q22.1b	HERV	ERV316A3	oneside	chr6	117049587	117055075	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP214	ENSG00000200248	5607	RPS29P13	ENSG00000217089	749	None	None
ERV316A3_6q22.1c	HERV	ERV316A3	prototype	chr6	117222732	117228538	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z98880.1	ENSG00000287253	33705	RNA5SP214	ENSG00000200248	161933	None	None
ERV316A3_6q22.1d	HERV	ERV316A3	oneside	chr6	117280647	117283625	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ROS1	ENSG00000047936	4675	VGLL2	ENSG00000170162	7082	None	None
MER41_6q22.1	HERV	MER41	oneside	chr6	117473177	117476926	-	noncoding	AL132671.2,DCBLD1	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000282218,ENSG00000164465	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_6q22.1a	HERV	MER4	oneside	chr6	117611860	117615272	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GOPC	ENSG00000047932	9318	NEPNP	ENSG00000218233	18434	None	None
HERVIP10FH_6q22.1	HERV	HERVIP10FH	prototype	chr6	117615274	117622007	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GOPC	ENSG00000047932	12732	NEPNP	ENSG00000218233	11699	chr6:117615890-117616242	None
MER4_6q22.1b	HERV	MER4	internal	chr6	117623163	117628976	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GOPC	ENSG00000047932	20621	NEPNP	ENSG00000218233	4730	None	None
HERVH_6q22.1c	HERV	HERVH	prototype	chr6	117658797	117665200	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NUS1	ENSG00000153989	10269	NEPNP	ENSG00000218233	13710	None	None
MER4_6q22.1c	HERV	MER4	oneside	chr6	117848985	117851684	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC35F1	ENSG00000196376	55580	NUS1	ENSG00000153989	138258	None	None
MER4_6q22.1d	HERV	MER4	internal	chr6	117856856	117859792	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC35F1	ENSG00000196376	47472	NUS1	ENSG00000153989	146129	None	None
MER41_6q22.31a	HERV	MER41	internal	chr6	118194214	118195116	-	noncoding	SLC35F1	protein_coding	ANTISENSE	ENSG00000196376	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6q22.31a	HERV	ERVLB4	oneside	chr6	118305026	118306363	-	noncoding	SLC35F1	protein_coding	ANTISENSE	ENSG00000196376	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q22.31a	HERV	ERVLE	oneside	chr6	118402854	118406844	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589993.1	ENSG00000216809	45625	SLC35F1	ENSG00000196376	85178	None	None
HUERSP3_6q22.31	HERV	HUERSP3	oneside	chr6	118579711	118588950	+	noncoding	CEP85L	protein_coding	ANTISENSE	ENSG00000111860	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:118581690-118581947	None
MER41_6q22.31b	HERV	MER41	prototype	chr6	118601580	118608058	-	noncoding	CEP85L	protein_coding	SENSE	ENSG00000111860	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV30_6q22.31	HERV	HERV30	prototype	chr6	118617102	118626802	+	noncoding	CEP85L	protein_coding	ANTISENSE	ENSG00000111860	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q22.31b	HERV	ERVLE	internal	chr6	118694772	118700068	-	noncoding	CEP85L	protein_coding	SENSE	ENSG00000111860	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q22.31a	HERV	ERV316A3	oneside	chr6	118804589	118805872	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SELENOKP3	ENSG00000225549	21169	MCM9	ENSG00000111877	7570	None	None
HERVFRD_6q22.31	HERV	HERVFRD	prototype	chr6	119039642	119042597	+	noncoding	AL137009.2,FAM184A	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000253194,ENSG00000111879	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q22.31c	HERV	ERVLE	internal	chr6	119090676	119092125	-	noncoding	AL137009.2,FAM184A	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000253194,ENSG00000111879	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q22.31b	HERV	ERV316A3	internal	chr6	119092566	119093946	-	noncoding	AL137009.2,FAM184A	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000253194,ENSG00000111879	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6q22.31b	HERV	ERVLB4	oneside	chr6	119710088	119715861	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3144	ENSG00000265725	299318	AL078600.1	ENSG00000287100	318259	None	None
HERVI_6q22.31	HERV	HERVI	prototype	chr6	119764795	119771992	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3144	ENSG00000265725	243187	AL078600.1	ENSG00000287100	372966	None	None
HERVIP10F_6q22.31	HERV	HERVIP10F	internal	chr6	119768973	119770120	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3144	ENSG00000265725	245059	AL078600.1	ENSG00000287100	377144	None	None
ERVLE_6q22.31d	HERV	ERVLE	internal	chr6	120041731	120043415	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL096854.1	ENSG00000286540	419096	MIR3144	ENSG00000265725	26474	None	None
ERVLE_6q22.31e	HERV	ERVLE	internal	chr6	120275002	120275855	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL096854.1	ENSG00000286540	186656	MIR3144	ENSG00000265725	259745	None	None
ERVLE_6q22.31f	HERV	ERVLE	internal	chr6	120409764	120410317	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL096854.1	ENSG00000286540	52194	MIR3144	ENSG00000265725	394507	None	None
HERVH_6q22.31a	HERV	HERVH	prototype	chr6	120462634	120468133	-	noncoding	AL096854.1	lncRNA	ANTISENSE	ENSG00000286540	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q22.31a	HERV	HERVL	oneside	chr6	120505957	120509018	-	noncoding	AL096854.1	lncRNA	ANTISENSE	ENSG00000286540	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6q22.31b	HERV	HERVH	prototype	chr6	120924825	120930857	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357513.1	ENSG00000287992	79350	TBC1D32	ENSG00000146350	148637	None	None
HERVK11D_6q22.31	HERV	HERVK11D	prototype	chr6	121042085	121049347	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL357513.1	ENSG00000287992	196610	TBC1D32	ENSG00000146350	30147	None	None
HERVL_6q22.31b	HERV	HERVL	oneside	chr6	121172279	121173445	+	noncoding	TBC1D32	protein_coding	ANTISENSE	ENSG00000146350	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q22.31g	HERV	ERVLE	internal	chr6	121184165	121186687	+	noncoding	TBC1D32	protein_coding	ANTISENSE	ENSG00000146350	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q22.31c	HERV	HERVL	prototype	chr6	121191685	121198343	+	noncoding	TBC1D32	protein_coding	ANTISENSE	ENSG00000146350	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q22.31d	HERV	HERVL	oneside	chr6	121216004	121217376	+	noncoding	TBC1D32	protein_coding	ANTISENSE	ENSG00000146350	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q22.31h	HERV	ERVLE	oneside	chr6	121534278	121536098	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU4-76P	ENSG00000201379	6388	AL138729.1	ENSG00000219784	54370	None	None
HERVH_6q22.31c	HERV	HERVH	prototype	chr6	121620422	121626300	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL603865.2	ENSG00000220326	14709	RNU2-8P	ENSG00000222659	39901	None	chr6:121625951-121625954
MER4_6q22.31	HERV	MER4	oneside	chr6	121631522	121634431	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL603865.2	ENSG00000220326	6578	RNU2-8P	ENSG00000222659	51001	None	None
HERVL_6q22.31e	HERV	HERVL	oneside	chr6	121634444	121636191	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU2-8P	ENSG00000222659	53923	AL603865.2	ENSG00000220326	4818	None	None
HERVL_6q22.31f	HERV	HERVL	oneside	chr6	121636307	121638441	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL603865.2	ENSG00000220326	2568	RNU2-8P	ENSG00000222659	55786	None	None
ERVLE_6q22.31i	HERV	ERVLE	internal	chr6	121920375	121922037	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-18P	ENSG00000199932	289611	HMGB3P18	ENSG00000220184	61607	None	None
ERV316A3_6q22.31c	HERV	ERV316A3	internal	chr6	122156366	122158710	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-18P	ENSG00000199932	52938	HMGB3P18	ENSG00000220184	297598	None	None
HERVL18_6q22.31a	HERV	HERVL18	oneside	chr6	122360886	122366684	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-18P	ENSG00000199932	149075	HSF2	ENSG00000025156	32867	None	None
HERVL_6q22.31g	HERV	HERVL	oneside	chr6	122454582	122455654	+	noncoding	SERINC1,Z99129.1	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000111897,ENSG00000275339	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVKC4_6q22.31	HERV	HERVKC4	prototype	chr6	122504845	122512093	-	noncoding	PKIB	protein_coding	ANTISENSE	ENSG00000135549	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q22.31j	HERV	ERVLE	oneside	chr6	122555891	122557953	+	noncoding	PKIB	protein_coding	SENSE	ENSG00000135549	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q22.31h	HERV	HERVL	prototype	chr6	122593819	122600432	-	noncoding	PKIB,AL512283.2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000135549,ENSG00000287258	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6q22.31c	HERV	ERVLB4	prototype	chr6	122647057	122652643	-	noncoding	PKIB	protein_coding	ANTISENSE	ENSG00000135549	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVEA_6q22.31	HERV	HERVEA	prototype	chr6	122741515	122749262	-	coding	RN7SL564P	misc_RNA	ANTISENSE	ENSG00000240606	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_6q22.31d	HERV	HERVH	oneside	chr6	122840217	122845567	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SMPDL3A	ENSG00000172594	30497	ATP5MGP2	ENSG00000232362	14111	None	None
MER101_6q22.31	HERV	MER101	internal	chr6	123304696	123305846	+	noncoding	TRDN	protein_coding	ANTISENSE	ENSG00000186439	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6q22.31e	HERV	HERVH	prototype	chr6	123556844	123562344	+	noncoding	TRDN,AL445259.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000186439,ENSG00000285691	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_6q22.31f	HERV	HERVH	prototype	chr6	123582336	123588007	-	noncoding	TRDN	protein_coding	SENSE	ENSG00000186439	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q22.31d	HERV	ERV316A3	oneside	chr6	123710909	123713878	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133257.1	ENSG00000285941	25586	NKAIN2	ENSG00000188580	89987	None	None
ERV316A3_6q22.31e	HERV	ERV316A3	oneside	chr6	123720896	123722803	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133257.1	ENSG00000285941	35573	NKAIN2	ENSG00000188580	81062	None	None
ERVLE_6q22.31k	HERV	ERVLE	internal	chr6	123772014	123774441	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NKAIN2	ENSG00000188580	29424	AL133257.1	ENSG00000285941	86691	None	None
HERVL_6q22.31i	HERV	HERVL	prototype	chr6	123793483	123799685	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133257.1	ENSG00000285941	108160	NKAIN2	ENSG00000188580	4180	None	None
ERV316A3_6q22.31f	HERV	ERV316A3	prototype	chr6	124328507	124330699	-	noncoding	NKAIN2	protein_coding	ANTISENSE	ENSG00000188580	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q22.31g	HERV	ERV316A3	oneside	chr6	124439889	124443608	-	noncoding	NKAIN2	protein_coding	ANTISENSE	ENSG00000188580	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6q22.31g	HERV	HERVH	prototype	chr6	124890407	124897763	+	coding	RNF217-AS1	lncRNA	ANTISENSE	ENSG00000236548	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6q22.31c	HERV	MER41	internal	chr6	125120074	125122084	+	noncoding	TPD52L1	protein_coding	SENSE	ENSG00000111907	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_6q22.31b	HERV	HERVL18	prototype	chr6	125267901	125274451	+	noncoding	HDDC2,AL121938.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000111906,ENSG00000286299	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr6:125268074-125268080,chr6:125268101-125268120,chr6:125268132-125268142
ERV316A3_6q22.31h	HERV	ERV316A3	oneside	chr6	125510375	125511281	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450332.1	ENSG00000226409	65182	AL365259.1	ENSG00000237742	66264	None	None
HERVH_6q22.31h	HERV	HERVH	prototype	chr6	125701848	125707763	-	noncoding	AL365259.1,LINC02523	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000237742,ENSG00000224506	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_6q22.32	HERV	HML1	prototype	chr6	125910949	125912799	-	noncoding	NCOA7	protein_coding	ANTISENSE	ENSG00000111912	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_6q22.32	HERV	HERVL40	oneside	chr6	126044515	126049104	+	noncoding	TRMT11	protein_coding	SENSE	ENSG00000066651	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q22.32	HERV	ERVLE	internal	chr6	126079362	126082227	+	noncoding	TRMT11	protein_coding	SENSE	ENSG00000066651	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_6q22.32a	HERV	MER101	internal	chr6	126325258	126326598	+	noncoding	AL356534.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000286215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_6q22.32b	HERV	MER101	oneside	chr6	126332790	126334850	+	noncoding	AL356534.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000286215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6q22.33	HERV	HERVH	prototype	chr6	126848846	126854454	+	noncoding	AL356534.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000286215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_6q22.33	HERV	ERVL	oneside	chr6	126894522	126899750	+	noncoding	AL356534.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000286215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_6q22.33	HERV	MER61	oneside	chr6	127599328	127602176	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL592291.1	ENSG00000219284	30782	C6orf58	ENSG00000184530	7508	None	None
ERV316A3_6q22.33	HERV	ERV316A3	oneside	chr6	127704172	127706078	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02536	ENSG00000281248	22617	THEMIS	ENSG00000172673	1994	None	None
HERVL_6q22.33a	HERV	HERVL	oneside	chr6	127800528	127802861	+	noncoding	THEMIS	protein_coding	ANTISENSE	ENSG00000172673	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q22.33a	HERV	ERVLE	internal	chr6	127953862	127955197	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTPRK	ENSG00000152894	13582	THEMIS	ENSG00000172673	35231	None	None
ERVLE_6q22.33b	HERV	ERVLE	internal	chr6	128650836	128653147	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589991.1	ENSG00000202200	108570	AL080315.2	ENSG00000220110	11183	None	None
HERVL_6q22.33b	HERV	HERVL	prototype	chr6	129406726	129409946	-	noncoding	LAMA2	protein_coding	ANTISENSE	ENSG00000196569	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q22.33c	HERV	ERVLE	oneside	chr6	129907164	129908733	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	L3MBTL3	ENSG00000198945	104966	TMEM244	ENSG00000203756	45617	None	None
HERVH_6q23.1	HERV	HERVH	prototype	chr6	130192311	130198222	+	noncoding	SAMD3	protein_coding	ANTISENSE	ENSG00000164483	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_6q23.1	HERV	HARLEQUIN	oneside	chr6	130261359	130267970	+	noncoding	SAMD3	protein_coding	ANTISENSE	ENSG00000164483	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q23.1	HERV	ERVLE	oneside	chr6	130473894	130475512	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357274.1	ENSG00000202438	98484	TMEM200A	ENSG00000164484	30831	None	None
HERVH_6q23.2a	HERV	HERVH	prototype	chr6	131295357	131301196	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AKAP7	ENSG00000118507	11822	RPL21P67	ENSG00000219776	167863	chr6:131295221-131295554	None
HERVH_6q23.2b	HERV	HERVH	prototype	chr6	131323296	131329137	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AKAP7	ENSG00000118507	39761	RPL21P67	ENSG00000219776	139922	chr6:131323282-131323642	None
MER41_6q23.2	HERV	MER41	oneside	chr6	131331293	131332824	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AKAP7	ENSG00000118507	47758	RPL21P67	ENSG00000219776	136235	None	None
HERVH_6q23.2c	HERV	HERVH	prototype	chr6	131338800	131344564	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AKAP7	ENSG00000118507	55265	RPL21P67	ENSG00000219776	124495	None	None
HERVH_6q23.2d	HERV	HERVH	prototype	chr6	131402925	131408542	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AKAP7	ENSG00000118507	119390	RPL21P67	ENSG00000219776	60517	None	None
HERVL74_6q23.2	HERV	HERVL74	internal	chr6	131440431	131442963	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AKAP7	ENSG00000118507	156896	RPL21P67	ENSG00000219776	26096	None	None
HERVH_6q23.2e	HERV	HERVH	prototype	chr6	131504327	131509186	-	noncoding	ARG1	protein_coding	ANTISENSE	ENSG00000118520	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q23.2a	HERV	ERV316A3	internal	chr6	131782176	131783854	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005587.1	ENSG00000216917	864	MIR548H5	ENSG00000266807	8318	None	None
HERVH_6q23.2f	HERV	HERVH	prototype	chr6	131901550	131907417	+	noncoding	AL117378.1	lncRNA	SENSE	ENSG00000236673	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr6:131902935-131902943,chr6:131901917-131901953
ERV316A3_6q23.2b	HERV	ERV316A3	oneside	chr6	132160779	132164412	+	noncoding	LINC01013	lncRNA	SENSE	ENSG00000228495	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_6q23.2a	HERV	HERVL40	oneside	chr6	132170479	132172306	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EEF1A1P36	ENSG00000223912	99676	LINC01013	ENSG00000228495	1105	None	None
ERVLB4_6q23.2a	HERV	ERVLB4	internal	chr6	132478457	132480921	+	noncoding	STX7	protein_coding	ANTISENSE	ENSG00000079950	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q23.2c	HERV	ERV316A3	internal	chr6	132544147	132545101	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TAAR8	ENSG00000146385	7592	TAAR9	ENSG00000237110	4811	None	None
ERVLE_6q23.2a	HERV	ERVLE	internal	chr6	132563277	132564500	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TAAR6	ENSG00000146383	5822	TAAR7P	ENSG00000235998	4012	None	None
HERVL_6q23.2a	HERV	HERVL	prototype	chr6	133269757	133273501	-	noncoding	EYA4	protein_coding	ANTISENSE	ENSG00000112319	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr6:133272914-133272948,chr6:133272979-133272998
HERVL40_6q23.2b	HERV	HERVL40	prototype	chr6	133360991	133365319	+	noncoding	EYA4	protein_coding	SENSE	ENSG00000112319	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q23.2b	HERV	HERVL	prototype	chr6	133556992	133562147	-	noncoding	TARID	lncRNA	SENSE	ENSG00000227954	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6q23.2b	HERV	ERVLB4	oneside	chr6	133627971	133630255	+	noncoding	TARID	lncRNA	ANTISENSE	ENSG00000227954	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q23.2c	HERV	HERVL	internal	chr6	133654072	133659489	+	coding	TARID	lncRNA	ANTISENSE	ENSG00000227954	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q23.2b	HERV	ERVLE	internal	chr6	133689205	133691594	-	noncoding	TARID	lncRNA	SENSE	ENSG00000227954	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q23.2c	HERV	ERVLE	internal	chr6	133946581	133948031	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TBPL1	ENSG00000028839	4139	TCF21	ENSG00000118526	51028	None	None
ERVLB4_6q23.2c	HERV	ERVLB4	oneside	chr6	134186061	134188500	-	noncoding	SGK1	protein_coding	SENSE	ENSG00000118515	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q23.2d	HERV	ERVLE	prototype	chr6	134532708	134536159	+	noncoding	AL078590.2	lncRNA	ANTISENSE	ENSG00000232310	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML1_6q23.2	HERV	HML1	prototype	chr6	134600811	134605423	-	noncoding	AL078590.2,FAM8A6P	lncRNA,processed_pseudogene	SENSE,SENSE	ENSG00000232310,ENSG00000218772	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q23.3a	HERV	ERVLE	internal	chr6	134769530	134770270	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL021939.1	ENSG00000213117	127604	AL121970.1	ENSG00000236389	62181	None	None
ERVL_6q23.3a	HERV	ERVL	internal	chr6	134771009	134771659	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL021939.1	ENSG00000213117	126215	AL121970.1	ENSG00000236389	63660	None	None
HERVL18_6q23.3	HERV	HERVL18	prototype	chr6	134871407	134875649	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL021939.1	ENSG00000213117	22225	AL121970.1	ENSG00000236389	164058	chr6:134875314-134875714	chr6:134875431-134875435
ERV316A3_6q23.3a	HERV	ERV316A3	oneside	chr6	135569650	135574376	+	noncoding	LINC00271	lncRNA	SENSE	ENSG00000231028	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q23.3b	HERV	ERVLE	internal	chr6	135579885	135582302	+	noncoding	LINC00271	lncRNA	SENSE	ENSG00000231028	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q23.3c	HERV	ERVLE	oneside	chr6	135800510	135803032	-	noncoding	LINC00271	lncRNA	ANTISENSE	ENSG00000231028	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6q23.3	HERV	HERVH	prototype	chr6	137060300	137067121	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IL22RA2	ENSG00000164485	76699	IL20RA	ENSG00000016402	15120	None	chr6:137066761-137066777
ERVLB4_6q23.3	HERV	ERVLB4	internal	chr6	137118356	137120905	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IL22RA2	ENSG00000164485	22915	IL20RA	ENSG00000016402	73176	None	None
ERVLE_6q23.3d	HERV	ERVLE	internal	chr6	137152779	137154029	+	noncoding	IL22RA2	protein_coding	ANTISENSE	ENSG00000164485	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_6q23.3a	HERV	MER4B	internal	chr6	137180019	137180696	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IFNGR1	ENSG00000027697	16788	IL22RA2	ENSG00000164485	6371	None	None
MER41_6q23.3	HERV	MER41	internal	chr6	137180904	137186012	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IFNGR1	ENSG00000027697	11472	IL22RA2	ENSG00000164485	7256	None	None
MER4B_6q23.3b	HERV	MER4B	internal	chr6	137186611	137191359	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IFNGR1	ENSG00000027697	6125	IL22RA2	ENSG00000164485	12963	None	None
ERVLE_6q23.3e	HERV	ERVLE	internal	chr6	137463243	137465236	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IFNGR1	ENSG00000027697	243794	OLIG3	ENSG00000177468	26963	None	None
MER61_6q23.3	HERV	MER61	prototype	chr6	137652412	137657139	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BTF3L4P3	ENSG00000213108	108040	AL356234.2	ENSG00000230533	859	None	None
ERVL_6q23.3b	HERV	ERVL	prototype	chr6	137690931	137694326	+	noncoding	AL356234.2,AL356234.3	lncRNA,lncRNA	SENSE,SENSE	ENSG00000230533,ENSG00000283265	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr6:137693736-137694079	chr6:137693056-137693073,chr6:137693080-137693091,chr6:137693124-137693137
HERVW_6q23.3a	HERV	HERVW	oneside	chr6	137718928	137720499	-	noncoding	AL356234.2	lncRNA	ANTISENSE	ENSG00000230533	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_6q23.3b	HERV	HERVW	internal	chr6	137720646	137722702	-	noncoding	AL356234.2	lncRNA	ANTISENSE	ENSG00000230533	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q23.3b	HERV	ERV316A3	oneside	chr6	138026947	138028628	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP42	ENSG00000219463	30800	PERP	ENSG00000112378	59877	None	None
ERVLE_6q23.3f	HERV	ERVLE	internal	chr6	138083788	138084844	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP42	ENSG00000219463	87641	PERP	ENSG00000112378	3661	None	None
ERV316A3_6q24.1a	HERV	ERV316A3	prototype	chr6	138414701	138420870	+	noncoding	HEBP2	protein_coding	SENSE	ENSG00000051620	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q24.1a	HERV	ERVLE	internal	chr6	138737919	138744048	+	noncoding	GVQW2	protein_coding	ANTISENSE	ENSG00000279968	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q24.1b	HERV	ERV316A3	internal	chr6	138997743	138998298	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	REPS1	ENSG00000135597	9482	ABRACL	ENSG00000146386	30447	None	None
ERV316A3_6q24.1c	HERV	ERV316A3	oneside	chr6	138998462	139000534	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	REPS1	ENSG00000135597	10201	ABRACL	ENSG00000146386	28211	None	None
MER41_6q24.1	HERV	MER41	opposite*	chr6	140190791	140195417	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP220	ENSG00000252107	32097	MIR3668	ENSG00000263514	9835	None	None
ERVLE_6q24.1b	HERV	ERVLE	internal	chr6	140247523	140253262	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3668	ENSG00000263514	42197	AL035446.2	ENSG00000285875	322526	None	None
HERVH_6q24.1a	HERV	HERVH	prototype	chr6	140257496	140263080	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL035446.2	ENSG00000285875	312708	MIR3668	ENSG00000263514	52170	None	None
HERVL_6q24.1a	HERV	HERVL	oneside	chr6	140329784	140331656	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL035446.2	ENSG00000285875	244132	MIR3668	ENSG00000263514	124458	None	None
HERVL_6q24.1b	HERV	HERVL	oneside	chr6	140331735	140336490	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL035446.2	ENSG00000285875	239298	MIR3668	ENSG00000263514	126409	None	None
ERVLB4_6q24.1a	HERV	ERVLB4	oneside	chr6	140497069	140498418	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL035446.2	ENSG00000285875	77370	MIR3668	ENSG00000263514	291743	None	None
ERVLE_6q24.1c	HERV	ERVLE	internal	chr6	140641595	140642485	-	noncoding	AL035446.2	lncRNA	SENSE	ENSG00000285875	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q24.1c	HERV	HERVL	oneside	chr6	140645838	140650333	+	noncoding	AL035446.2	lncRNA	ANTISENSE	ENSG00000285875	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q24.1d	HERV	HERVL	oneside	chr6	140689914	140692716	-	noncoding	AL035446.2	lncRNA	SENSE	ENSG00000285875	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q24.1e	HERV	HERVL	oneside	chr6	140692782	140696387	-	noncoding	AL035446.2	lncRNA	SENSE	ENSG00000285875	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_6q24.1	HERV	ERVL	oneside	chr6	140750737	140752184	+	noncoding	AL035446.2	lncRNA	ANTISENSE	ENSG00000285875	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q24.1d	HERV	ERVLE	internal	chr6	140791988	140793570	-	noncoding	AL035446.2	lncRNA	SENSE	ENSG00000285875	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6q24.1b	HERV	ERVLB4	internal	chr6	140833078	140835208	+	noncoding	AL035446.2	lncRNA	ANTISENSE	ENSG00000285875	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_6q24.1a	HERV	MER61	oneside	chr6	140893344	140895551	-	noncoding	AL035446.2	lncRNA	SENSE	ENSG00000285875	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_6q24.1b	HERV	MER61	oneside	chr6	140895592	140898542	-	noncoding	AL035446.2	lncRNA	SENSE	ENSG00000285875	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr6:140898374-140898387,chr6:140898397-140898435
ERV316A3_6q24.1d	HERV	ERV316A3	prototype	chr6	141023967	141027475	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357080.1	ENSG00000275138	3941	AL355596.2	ENSG00000286452	375765	None	None
ERV316A3_6q24.1e	HERV	ERV316A3	internal	chr6	141051398	141054393	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357080.1	ENSG00000275138	31372	AL355596.2	ENSG00000286452	348847	None	None
ERV316A3_6q24.1f	HERV	ERV316A3	internal	chr6	141054632	141055248	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357080.1	ENSG00000275138	34606	AL355596.2	ENSG00000286452	347992	None	None
HERVL_6q24.1f	HERV	HERVL	internal	chr6	141068751	141070459	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355596.2	ENSG00000286452	332781	AL357080.1	ENSG00000275138	48725	None	None
HUERSP3B_6q24.1	HERV	HUERSP3B	prototype	chr6	141148318	141151389	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355596.2	ENSG00000286452	251851	AL357080.1	ENSG00000275138	128292	None	None
ERV316A3_6q24.1g	HERV	ERV316A3	oneside	chr6	141204309	141210559	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355596.2	ENSG00000286452	192681	AL357080.1	ENSG00000275138	184283	None	None
HERVH_6q24.1b	HERV	HERVH	prototype	chr6	141452825	141460680	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355596.1	ENSG00000259828	1819	RN7SKP106	ENSG00000222764	25461	None	None
LTR25_6q24.1	HERV	LTR25	internal	chr6	141467145	141471322	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP106	ENSG00000222764	14819	AL355596.1	ENSG00000259828	16139	None	None
MER61_6q24.1c	HERV	MER61	internal	chr6	141471319	141472818	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP106	ENSG00000222764	13323	AL355596.1	ENSG00000259828	20313	None	None
HERVL_6q24.1g	HERV	HERVL	internal	chr6	141654494	141656654	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS3AP23	ENSG00000218351	17991	NMBR	ENSG00000135577	401676	None	None
HERVL40_6q24.1	HERV	HERVL40	oneside	chr6	141720589	141724181	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NMBR	ENSG00000135577	334149	RPS3AP23	ENSG00000218351	84086	None	None
MER61_6q24.1d	HERV	MER61	oneside	chr6	141831663	141833672	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS3AP23	ENSG00000218351	195160	NMBR	ENSG00000135577	224658	None	None
ERV316A3_6q24.1h	HERV	ERV316A3	oneside	chr6	141853079	141856872	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NMBR	ENSG00000135577	201458	RPS3AP23	ENSG00000218351	216576	None	None
ERVLE_6q24.1e	HERV	ERVLE	internal	chr6	141925779	141927023	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS3AP23	ENSG00000218351	289276	NMBR	ENSG00000135577	131307	None	None
PABLB_6q24.1	HERV	PABLB	internal	chr6	141957435	141964848	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS3AP23	ENSG00000218351	320932	NMBR	ENSG00000135577	93482	None	None
HERVH_6q24.1c	HERV	HERVH	prototype	chr6	142015666	142021782	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS3AP23	ENSG00000218351	379163	NMBR	ENSG00000135577	36548	None	None
ERVLB4_6q24.1c	HERV	ERVLB4	internal	chr6	142193649	142194212	+	noncoding	VTA1	protein_coding	SENSE	ENSG00000009844	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q24.2a	HERV	ERV316A3	oneside	chr6	142526409	142528367	-	noncoding	AL359313.1	lncRNA	SENSE	ENSG00000236366	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH48_6q24.2	HERV	HERVH48	prototype	chr6	142536479	142543225	+	noncoding	AL359313.1	lncRNA	ANTISENSE	ENSG00000236366	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_6q24.2a	HERV	MER41	oneside	chr6	142571824	142577001	+	coding	AL359313.1	lncRNA	ANTISENSE	ENSG00000236366	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6q24.2b	HERV	MER41	oneside	chr6	142583415	142585826	+	noncoding	AL359313.1	lncRNA	ANTISENSE	ENSG00000236366	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6q24.2	HERV	ERVLB4	internal	chr6	142971408	142972054	+	noncoding	LINC01277	lncRNA	ANTISENSE	ENSG00000229017	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_6q24.2a	HERV	HERVW	prototype	chr6	143079801	143087712	-	noncoding	AIG1	protein_coding	ANTISENSE	ENSG00000146416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q24.2a	HERV	HERVL	oneside	chr6	143868226	143872553	-	noncoding	AL049844.3,ZC2HC1B	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000280148,ENSG00000118491	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q24.2b	HERV	HERVL	oneside	chr6	143875136	143877035	-	noncoding	AL049844.3,ZC2HC1B	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000280148,ENSG00000118491	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_6q24.2b	HERV	HERVW	prototype	chr6	144116325	144121561	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPL42P3	ENSG00000219297	14889	SF3B5	ENSG00000169976	20752	None	None
HERVH_6q24.2	HERV	HERVH	prototype	chr6	144923175	144928858	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UTRN	ENSG00000152818	70141	AL023283.1	ENSG00000285598	367687	None	chr6:144923563-144923596,chr6:144926652-144926682
MER34B_6q24.2	HERV	MER34B	internal	chr6	145047955	145049694	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL023283.1	ENSG00000285598	246851	UTRN	ENSG00000152818	194921	None	None
ERV316A3_6q24.2b	HERV	ERV316A3	prototype	chr6	145053170	145059928	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UTRN	ENSG00000152818	200136	AL023283.1	ENSG00000285598	236617	None	None
HERVH_6q24.3a	HERV	HERVH	prototype	chr6	145103186	145108857	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL023283.1	ENSG00000285598	187688	UTRN	ENSG00000152818	250152	None	None
ERVLE_6q24.3a	HERV	ERVLE	internal	chr6	145345883	145346865	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL023283.1	ENSG00000285598	34791	EPM2A	ENSG00000112425	35670	None	None
ERVLE_6q24.3b	HERV	ERVLE	internal	chr6	145513579	145516278	+	noncoding	EPM2A	protein_coding	ANTISENSE	ENSG00000112425	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_6q24.3	HERV	HML5	prototype	chr6	145531054	145532741	+	noncoding	EPM2A	protein_coding	ANTISENSE	ENSG00000112425	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q24.3a	HERV	HERVL	oneside	chr6	145569809	145573736	-	noncoding	EPM2A	protein_coding	SENSE	ENSG00000112425	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q24.3b	HERV	HERVL	internal	chr6	145573799	145575892	-	coding	EPM2A	protein_coding	SENSE	ENSG00000112425	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q24.3c	HERV	ERVLE	internal	chr6	145754552	145756579	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL023806.5	ENSG00000288551	3415	AL023806.4	ENSG00000288056	27827	None	None
ERVL_6q24.3	HERV	ERVL	oneside	chr6	145784612	145789228	+	noncoding	AL023806.4	lncRNA	ANTISENSE	ENSG00000288056	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q24.3c	HERV	HERVL	oneside	chr6	145786023	145787348	-	noncoding	AL023806.4	lncRNA	SENSE	ENSG00000288056	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q24.3a	HERV	ERV316A3	oneside	chr6	146197487	146201059	-	noncoding	GRM1	protein_coding	ANTISENSE	ENSG00000152822	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6q24.3b	HERV	HERVH	prototype	chr6	146450469	146456469	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAB32	ENSG00000118508	87364	GRM1	ENSG00000152822	12868	None	None
LTR57_6q24.3	HERV	LTR57	internal	chr6	146648958	146650519	-	noncoding	ADGB	protein_coding	ANTISENSE	ENSG00000118492	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q24.3b	HERV	ERV316A3	internal	chr6	146731369	146732425	-	noncoding	ADGB	protein_coding	ANTISENSE	ENSG00000118492	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_6q24.3	HERV	HERV9	oneside	chr6	146792861	146794413	-	noncoding	ADGB	protein_coding	ANTISENSE	ENSG00000118492	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6q24.3	HERV	ERVLB4	internal	chr6	147516654	147517354	-	noncoding	SAMD5	protein_coding	ANTISENSE	ENSG00000203727	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_6q24.3a	HERV	HUERSP1	oneside	chr6	147534397	147538315	-	noncoding	SAMD5	protein_coding	ANTISENSE	ENSG00000203727	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_6q24.3b	HERV	HUERSP1	internal	chr6	147538349	147540982	-	noncoding	SAMD5	protein_coding	ANTISENSE	ENSG00000203727	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr6:147540959-147540963
HUERSP1_6q24.3c	HERV	HUERSP1	oneside	chr6	147541250	147543024	-	noncoding	SAMD5	protein_coding	ANTISENSE	ENSG00000203727	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6q24.3c	HERV	HERVH	internal	chr6	147631027	147632682	-	noncoding	SAMD5	protein_coding	ANTISENSE	ENSG00000203727	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6q25.1	HERV	HERVH	prototype	chr6	148639772	148645508	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SNRPEP6	ENSG00000217824	72118	RPSAP40	ENSG00000231368	2199	None	None
ERV316A3_6q25.1a	HERV	ERV316A3	oneside	chr6	148715406	148716461	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP40	ENSG00000231368	66809	UST	ENSG00000111962	30569	None	None
ERV316A3_6q25.1b	HERV	ERV316A3	oneside	chr6	149150909	149153287	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL603766.1	ENSG00000219487	38237	AL031056.1	ENSG00000228408	64639	None	None
ERV316A3_6q25.1c	HERV	ERV316A3	oneside	chr6	149425042	149429091	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZC3H12D	ENSG00000178199	17704	TAB2	ENSG00000055208	13429	None	None
HUERSP3_6q25.1	HERV	HUERSP3	internal	chr6	149548231	149551114	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL078581.3	ENSG00000235168	10038	PPIL4	ENSG00000131013	2188	None	None
ERV316A3_6q25.1d	HERV	ERV316A3	internal	chr6	149920275	149922207	+	noncoding	RAET1G	protein_coding	ANTISENSE	ENSG00000203722	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q25.1e	HERV	ERV316A3	internal	chr6	149943427	149944839	-	noncoding	ULBP2	protein_coding	ANTISENSE	ENSG00000131015	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q25.1f	HERV	ERV316A3	internal	chr6	149966830	149968150	-	noncoding	ULBP1	protein_coding	ANTISENSE	ENSG00000111981	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q25.1g	HERV	ERV316A3	internal	chr6	150002113	150003708	+	noncoding	RAET1K	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000218358	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q25.1h	HERV	ERV316A3	internal	chr6	150067168	150068131	+	noncoding	ULBP3	protein_coding	ANTISENSE	ENSG00000131019	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH48_6q25.1	HERV	HERVH48	prototype	chr6	150098242	150101075	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ULBP3	ENSG00000131019	29121	PPP1R14C	ENSG00000198729	41969	None	None
ERVLB4_6q25.1	HERV	ERVLB4	oneside	chr6	150328053	150334582	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IYD	ENSG00000009765	34310	RNU4-7P	ENSG00000201628	1290	None	None
ERV316A3_6q25.1i	HERV	ERV316A3	internal	chr6	150468888	150471458	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL451061.1	ENSG00000219622	33353	IYD	ENSG00000009765	62919	chr6:150470858-150470982	None
HERV9_6q25.1	HERV	HERV9	prototype	chr6	150849127	150856692	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PLEKHG1	ENSG00000120278	5462	MTHFD1L	ENSG00000120254	8857	chr6:150854264-150854554	None
HML2_6q25.1	HERV	HML2	oneside	chr6	150859613	150862438	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PLEKHG1	ENSG00000120278	15948	MTHFD1L	ENSG00000120254	3111	None	None
HERVL_6q25.1	HERV	HERVL	prototype	chr6	152037895	152044933	-	noncoding	ESR1	protein_coding	ANTISENSE	ENSG00000091831	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6q25.2a	HERV	HERVH	prototype	chr6	152490339	152497169	+	noncoding	SYNE1	protein_coding	ANTISENSE	ENSG00000131018	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q25.2a	HERV	ERVLE	internal	chr6	152656318	152659148	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MYCT1	ENSG00000120279	38747	SYNE1	ENSG00000131018	18517	None	None
ERVLE_6q25.2b	HERV	ERVLE	internal	chr6	152662826	152663768	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SYNE1	ENSG00000131018	25025	MYCT1	ENSG00000120279	34127	None	None
ERVLE_6q25.2c	HERV	ERVLE	internal	chr6	152904846	152905555	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL080276.1	ENSG00000220745	53804	TUBB4BP7	ENSG00000217372	5566	None	None
HERVL18_6q25.2	HERV	HERVL18	prototype	chr6	153149994	153152963	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RGS17	ENSG00000091844	18712	RNA5SP224	ENSG00000201939	6257	None	None
ERVLE_6q25.2d	HERV	ERVLE	internal	chr6	153157711	153160692	-	noncoding	RNA5SP224	rRNA_pseudogene	SENSE	ENSG00000201939	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q25.2e	HERV	ERVLE	internal	chr6	153197878	153198915	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP224	ENSG00000201939	38533	AL590867.1	ENSG00000213121	32405	None	None
ERVLE_6q25.2f	HERV	ERVLE	internal	chr6	153288965	153290913	-	noncoding	AL590867.1	lncRNA	ANTISENSE	ENSG00000213121	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q25.2a	HERV	ERV316A3	oneside	chr6	153319345	153321133	+	noncoding	AL590867.1,AL358134.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000213121,ENSG00000237312	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_6q25.2	HERV	MER61	prototype	chr6	153352801	153357875	+	noncoding	AL358134.1	lncRNA	ANTISENSE	ENSG00000237312	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q25.2b	HERV	ERV316A3	internal	chr6	153378968	153379939	+	noncoding	AL358134.1	lncRNA	ANTISENSE	ENSG00000237312	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6q25.2a	HERV	MER41	oneside	chr6	153410991	153413768	-	noncoding	AL358134.1	lncRNA	SENSE	ENSG00000237312	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6q25.2b	HERV	MER41	oneside	chr6	153413821	153415988	-	noncoding	AL358134.1	lncRNA	SENSE	ENSG00000237312	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_6q25.2a	HERV	MER4	oneside	chr6	153442003	153446587	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO2P31	ENSG00000217160	219120	AL358134.1	ENSG00000237312	14849	None	None
MER4_6q25.2b	HERV	MER4	internal	chr6	153446808	153447908	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO2P31	ENSG00000217160	217799	AL358134.1	ENSG00000237312	19654	None	None
PRIMA4_6q25.2	HERV	PRIMA4	internal	chr6	153448018	153448999	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO2P31	ENSG00000217160	216708	AL358134.1	ENSG00000237312	20864	None	None
ERVLE_6q25.2g	HERV	ERVLE	oneside	chr6	153536088	153537664	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358134.1	ENSG00000237312	108934	MTCO2P31	ENSG00000217160	128043	None	None
ERV316A3_6q25.2c	HERV	ERV316A3	oneside	chr6	153603339	153605575	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO2P31	ENSG00000217160	60132	AL358134.1	ENSG00000237312	176185	None	None
ERV316A3_6q25.2d	HERV	ERV316A3	oneside	chr6	153844141	153847738	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P19	ENSG00000217085	90695	RNU6-896P	ENSG00000199246	162588	None	None
MER4_6q25.2c	HERV	MER4	prototype	chr6	153884937	153887965	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P19	ENSG00000217085	50468	RNU6-896P	ENSG00000199246	203384	None	None
HERVL_6q25.2	HERV	HERVL	prototype	chr6	153910445	153912970	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P19	ENSG00000217085	25463	RNU6-896P	ENSG00000199246	228892	None	None
HERVH_6q25.2b	HERV	HERVH	prototype	chr6	153922730	153927203	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-896P	ENSG00000199246	241177	HMGB3P19	ENSG00000217085	11230	None	None
PABLA_6q25.2	HERV	PABLA	internal	chr6	154104035	154108759	-	noncoding	OPRM1	protein_coding	ANTISENSE	ENSG00000112038	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_6q25.2a	HERV	HERVL40	oneside	chr6	154112245	154115125	-	noncoding	OPRM1	protein_coding	ANTISENSE	ENSG00000112038	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q25.2e	HERV	ERV316A3	oneside	chr6	154146796	154148845	-	noncoding	OPRM1	protein_coding	ANTISENSE	ENSG00000112038	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6q25.2	HERV	ERVLB4	prototype	chr6	154560951	154568180	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTRES1P1	ENSG00000220181	10709	RPS4XP8	ENSG00000219146	8129	None	None
HERVL40_6q25.2b	HERV	HERVL40	oneside	chr6	154603362	154605433	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS4XP8	ENSG00000219146	26283	AL591419.1	ENSG00000231316	183	None	None
HERVL_6q25.3a	HERV	HERVL	oneside	chr6	155603706	155605077	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-152P	ENSG00000238789	49886	NOX3	ENSG00000074771	147867	None	None
MER61_6q25.3	HERV	MER61	oneside	chr6	155609661	155611216	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-152P	ENSG00000238789	43747	NOX3	ENSG00000074771	153822	None	None
MER41_6q25.3a	HERV	MER41	internal	chr6	155611577	155615426	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-152P	ENSG00000238789	39537	NOX3	ENSG00000074771	155738	None	None
MER101_6q25.3a	HERV	MER101	internal	chr6	156483678	156485834	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512658.1	ENSG00000227360	7392	AL589693.1	ENSG00000287092	86089	None	None
ERVLE_6q25.3a	HERV	ERVLE	oneside	chr6	156650031	156652333	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512658.1	ENSG00000227360	145020	H3P28	ENSG00000220347	9717	None	None
HERVH_6q25.3a	HERV	HERVH	prototype	chr6	157700642	157706582	-	noncoding	SNX9	protein_coding	ANTISENSE	ENSG00000130340	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11_6q25.3	HERV	HERVK11	insert*	chr6	158296613	158303618	-	noncoding	TULP4,AL360169.2,AL360169.3	protein_coding,lncRNA,lncRNA	ANTISENSE,ANTISENSE,SENSE	ENSG00000130338,ENSG00000274023,ENSG00000287591	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr6:158303369-158303373
MER101_6q25.3b	HERV	MER101	internal	chr6	158550910	158552699	-	noncoding	TMEM181	protein_coding	ANTISENSE	ENSG00000146433	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_6q25.3a	HERV	LTR19	oneside	chr6	158611716	158613921	-	noncoding	TMEM181,TATDN2P2	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000146433,ENSG00000218226	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_6q25.3b	HERV	LTR19	oneside	chr6	158619516	158621390	-	noncoding	TMEM181,TATDN2P2	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000146433,ENSG00000218226	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_6q25.3	HERV	HERVIP10FH	prototype	chr6	158729866	158733323	+	noncoding	SYTL3	protein_coding	SENSE	ENSG00000164674	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6q25.3b	HERV	HERVH	prototype	chr6	158880386	158889215	-	coding	C6orf99	lncRNA	ANTISENSE	ENSG00000203711	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr6:158888458-158888477
ERVLE_6q25.3b	HERV	ERVLE	internal	chr6	159068001	159068741	+	noncoding	AL035530.2,AL035530.1,AL356417.3	lncRNA,lncRNA,lncRNA	SENSE,ANTISENSE,ANTISENSE	ENSG00000271913,ENSG00000226032,ENSG00000285492	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q25.3b	HERV	HERVL	prototype	chr6	159365714	159371785	-	coding	AL357832.1	lncRNA	SENSE	ENSG00000231178	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6q25.3c	HERV	HERVH	prototype	chr6	160228651	160234322	+	noncoding	SLC22A2	protein_coding	ANTISENSE	ENSG00000112499	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr6:160228942-160228946
MER41_6q25.3b	HERV	MER41	oneside	chr6	160234324	160238218	+	coding	SLC22A2	protein_coding	ANTISENSE	ENSG00000112499	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:160237641-160238066	None
HERVH_6q25.3d	HERV	HERVH	prototype	chr6	160286611	160292314	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC22A3	ENSG00000146477	56064	SLC22A2	ENSG00000112499	8973	None	None
ERV316A3_6q25.3	HERV	ERV316A3	internal	chr6	160318599	160322116	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC22A2	ENSG00000112499	40961	SLC22A3	ENSG00000146477	26262	None	None
HERVL_6q25.3c	HERV	HERVL	oneside	chr6	160501907	160505582	-	noncoding	LPAL2	transcribed_unprocessed_pseudogene	SENSE	ENSG00000213071	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q26a	HERV	HERVL	prototype	chr6	160653888	160659200	-	noncoding	LPA	protein_coding	SENSE	ENSG00000198670	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6q26	HERV	HERVH	oneside	chr6	160777230	160780906	+	noncoding	AL109933.3	unprocessed_pseudogene	SENSE	ENSG00000274903	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_6q26a	HERV	HERVIP10FH	oneside	chr6	160788118	160793721	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL109933.3	ENSG00000274903	4904	AL391361.2	ENSG00000224371	79167	None	None
PABLA_6q26a	HERV	PABLA	internal	chr6	160796255	160799280	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL109933.3	ENSG00000274903	13041	AL391361.2	ENSG00000224371	73608	None	None
MER41_6q26a	HERV	MER41	oneside	chr6	160799276	160800532	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL109933.3	ENSG00000274903	16062	AL391361.2	ENSG00000224371	72356	None	None
PRIMA4_6q26	HERV	PRIMA4	internal	chr6	160883402	160884426	+	noncoding	AL391361.2	lncRNA	ANTISENSE	ENSG00000224371	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_6q26a	HERV	MER4	oneside	chr6	160884507	160889673	+	noncoding	AL391361.2	lncRNA	ANTISENSE	ENSG00000224371	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_6q26b	HERV	MER4	oneside	chr6	161209918	161214377	+	noncoding	AGPAT4	protein_coding	ANTISENSE	ENSG00000026652	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6q26b	HERV	MER41	internal	chr6	161292492	161299086	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AGPAT4	ENSG00000026652	18431	PRKN	ENSG00000185345	48331	None	None
HERVIP10FH_6q26b	HERV	HERVIP10FH	prototype	chr6	161309654	161315874	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRKN	ENSG00000185345	31543	AGPAT4	ENSG00000026652	35593	None	chr6:161314915-161314938,chr6:161315243-161315247
PABLA_6q26b	HERV	PABLA	internal	chr6	161326252	161328115	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRKN	ENSG00000185345	19302	AGPAT4	ENSG00000026652	52191	None	None
PABLA_6q26c	HERV	PABLA	internal	chr6	161328344	161329705	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRKN	ENSG00000185345	17712	AGPAT4	ENSG00000026652	54283	None	None
MER4_6q26c	HERV	MER4	oneside	chr6	161329709	161331695	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AGPAT4	ENSG00000026652	55648	PRKN	ENSG00000185345	15722	None	None
MER4_6q26d	HERV	MER4	internal	chr6	161332288	161337508	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AGPAT4	ENSG00000026652	58227	PRKN	ENSG00000185345	9909	None	None
ERV316A3_6q26a	HERV	ERV316A3	prototype	chr6	161376690	161379814	+	noncoding	PRKN	protein_coding	ANTISENSE	ENSG00000185345	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q26	HERV	ERVLE	internal	chr6	162120486	162123400	+	noncoding	PRKN	protein_coding	ANTISENSE	ENSG00000185345	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_6q26a	HERV	HERVL40	prototype	chr6	162709338	162712650	+	noncoding	PRKN	protein_coding	ANTISENSE	ENSG00000185345	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_6q26b	HERV	HERVL40	internal	chr6	162890624	162892873	+	noncoding	PACRG	protein_coding	SENSE	ENSG00000112530	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_6q26c	HERV	MER41	prototype	chr6	163030507	163035230	-	noncoding	PACRG	protein_coding	ANTISENSE	ENSG00000112530	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q26b	HERV	ERV316A3	internal	chr6	163654017	163655654	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL078602.1	ENSG00000235538	15923	AL445307.1	ENSG00000228692	65852	None	None
HERVL_6q26b	HERV	HERVL	oneside	chr6	163676346	163677775	+	noncoding	AL078602.1	lncRNA	SENSE	ENSG00000235538	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6q26c	HERV	ERV316A3	internal	chr6	164080103	164081277	-	noncoding	AL078602.1	lncRNA	ANTISENSE	ENSG00000235538	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6q27a	HERV	HERVH	prototype	chr6	164338769	164344779	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358972.1	ENSG00000226739	1710	AL078602.1	ENSG00000235538	107159	None	None
ERVL_6q27a	HERV	ERVL	oneside	chr6	164461798	164463627	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450345.2	ENSG00000287550	327661	AL358972.1	ENSG00000226739	113154	None	None
ERVLB4_6q27a	HERV	ERVLB4	oneside	chr6	164463625	164465971	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450345.2	ENSG00000287550	325317	AL358972.1	ENSG00000226739	114981	None	None
HERVH_6q27b	HERV	HERVH	prototype	chr6	164652142	164658014	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450345.2	ENSG00000287550	133274	AL358972.1	ENSG00000226739	303498	None	None
HERVL_6q27a	HERV	HERVL	prototype	chr6	164807537	164814293	-	noncoding	AL450345.2	lncRNA	SENSE	ENSG00000287550	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6q27b	HERV	ERVLB4	oneside	chr6	164873923	164879776	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450345.1	ENSG00000227455	41809	AL133538.1	ENSG00000287877	48415	None	None
HUERSP3B_6q27	HERV	HUERSP3B	oneside	chr6	165049125	165051468	+	noncoding	AL133538.1	lncRNA	SENSE	ENSG00000287877	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_6q27	HERV	HERVP71A	prototype	chr6	165057200	165066263	-	noncoding	AL133538.1	lncRNA	ANTISENSE	ENSG00000287877	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q27b	HERV	HERVL	oneside	chr6	165194331	165196960	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136100.1	ENSG00000217878	76807	C6orf118	ENSG00000112539	82704	None	None
ERVLE_6q27a	HERV	ERVLE	internal	chr6	165451911	165455404	+	noncoding	PDE10A	protein_coding	ANTISENSE	ENSG00000112541	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr6:165452898-165453138	None
HML3_6q27a	HERV	HML3	oneside	chr6	165459605	165464178	+	noncoding	PDE10A	protein_coding	ANTISENSE	ENSG00000112541	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q27c	HERV	HERVL	prototype	chr6	165523822	165530340	+	noncoding	PDE10A	protein_coding	ANTISENSE	ENSG00000112541	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6q27c	HERV	ERVLB4	oneside	chr6	165583523	165585503	+	noncoding	PDE10A	protein_coding	ANTISENSE	ENSG00000112541	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL32_6q27	HERV	HERVL32	oneside	chr6	166270405	166272303	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121956.4	ENSG00000280850	3159	AL121956.1	ENSG00000233365	13458	None	None
HERVW_6q27a	HERV	HERVW	internal	chr6	166313897	166316431	+	noncoding	AL121956.6	lncRNA	SENSE	ENSG00000287189	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML1_6q27a	HERV	HML1	oneside	chr6	166316419	166317653	+	noncoding	AL121956.6	lncRNA	SENSE	ENSG00000287189	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML1_6q27b	HERV	HML1	oneside	chr6	166344927	166346070	-	noncoding	AL022069.3	lncRNA	ANTISENSE	ENSG00000286760	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_6q27a	HERV	MER101	internal	chr6	166729641	166730715	+	noncoding	RPS6KA2	protein_coding	ANTISENSE	ENSG00000071242	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_6q27b	HERV	HERVW	prototype	chr6	166891080	166898253	+	noncoding	RPS6KA2,AL159163.1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000071242,ENSG00000249141	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_6q27b	HERV	MER101	oneside	chr6	166918829	166922075	+	noncoding	AL159163.1	protein_coding	ANTISENSE	ENSG00000249141	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6q27d	HERV	HERVL	prototype	chr6	167062923	167065286	-	noncoding	FGFR1OP,Z94721.2	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000213066,ENSG00000272980	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q27b	HERV	ERVLE	internal	chr6	167103396	167106637	-	noncoding	Z94721.2	lncRNA	ANTISENSE	ENSG00000272980	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_6q27	HERV	HUERSP1	prototype	chr6	167226738	167233912	+	noncoding	HPAT5	lncRNA	SENSE	ENSG00000280707	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr6:167228222-167228245,chr6:167228253-167228264,chr6:167228271-167228316,chr6:167228321-167228331,chr6:167228336-167228340
HERVL_6q27e	HERV	HERVL	internal	chr6	167242536	167243095	-	noncoding	AL353747.2	lncRNA	ANTISENSE	ENSG00000228648	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_6q27b	HERV	ERVL	internal	chr6	167742882	167743776	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02487	ENSG00000203688	46592	AL009178.1	ENSG00000213065	23307	None	None
ERVLB4_6q27d	HERV	ERVLB4	prototype	chr6	168400842	168407700	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SMOC2	ENSG00000112562	33451	AL138918.1	ENSG00000260771	25487	None	None
HERVH_6q27c	HERV	HERVH	internal	chr6	168678254	168679632	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136099.1	ENSG00000235815	36974	SMOC2	ENSG00000112562	4809	None	None
HERVL_6q27f	HERV	HERVL	oneside	chr6	168768529	168772680	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136099.1	ENSG00000235815	45034	AL513210.2	ENSG00000280665	47743	None	None
HERVL_6q27g	HERV	HERVL	oneside	chr6	169098602	169102174	+	noncoding	AL136129.1	lncRNA	SENSE	ENSG00000286826	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr6:169098758-169098782
MER4B_6q27	HERV	MER4B	oneside	chr6	169111738	169116343	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136129.1	ENSG00000286826	9310	LINC01615	ENSG00000223485	40819	None	None
PABLA_6q27a	HERV	PABLA	internal	chr6	169333619	169336164	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02519	ENSG00000226194	33834	VTA1P1	ENSG00000224999	35660	None	None
PABLA_6q27b	HERV	PABLA	oneside	chr6	169336371	169338973	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02519	ENSG00000226194	31025	VTA1P1	ENSG00000224999	38412	None	None
LTR25_6q27	HERV	LTR25	internal	chr6	169390415	169393820	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL009176.1	ENSG00000285887	25184	LINC02519	ENSG00000226194	2030	None	None
HUERSP2_6q27	HERV	HUERSP2	internal	chr6	169393894	169394448	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL009176.1	ENSG00000285887	24556	LINC02519	ENSG00000226194	5509	None	None
MER101_6q27c	HERV	MER101	internal	chr6	169438544	169440773	+	noncoding	AL031315.1,AL135910.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000285733,ENSG00000272848	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q27c	HERV	ERVLE	internal	chr6	169499453	169500497	+	noncoding	AL031315.1,WDR27	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000285733,ENSG00000184465	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6q27d	HERV	ERVLE	internal	chr6	169783790	169786516	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00242	ENSG00000229214	2274	ERMARD	ENSG00000130023	2190	None	None
MER4_6q27a	HERV	MER4	prototype	chr6	169819169	169822076	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049612.1	ENSG00000236173	9067	AL603783.1	ENSG00000287823	265946	None	None
ERVLB4_6q27e	HERV	ERVLB4	prototype	chr6	169953280	169954998	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049612.1	ENSG00000236173	143178	AL603783.1	ENSG00000287823	133024	None	chr6:169954729-169954761
MER101_6q27d	HERV	MER101	oneside	chr6	170426568	170430754	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSMB1	ENSG00000008018	104366	AL008628.1	ENSG00000261003	7243	None	None
LTR57_6q27	HERV	LTR57	internal	chr6	170430663	170431676	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSMB1	ENSG00000008018	103444	AL008628.1	ENSG00000261003	11338	None	None
MER101_6q27e	HERV	MER101	oneside	chr6	170431046	170433166	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSMB1	ENSG00000008018	101954	AL008628.1	ENSG00000261003	11721	None	None
MER4_6q27b	HERV	MER4	oneside	chr6	170587441	170589068	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031259.1	ENSG00000287411	23554	PDCD2	ENSG00000071994	2749	None	None
HML3_6q27b	HERV	HML3	oneside	chr6	170593081	170596715	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031259.1	ENSG00000287411	15907	PDCD2	ENSG00000071994	8389	None	None
ERVLE_7p22.3	HERV	ERVLE	internal	chr7	67231	68014	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093627.1	ENSG00000232325	2958	AC215522.1	ENSG00000273644	29754	None	None
ERV316A3_7p22.3	HERV	ERV316A3	internal	chr7	1174984	1176956	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UNCX	ENSG00000164853	55916	AC091729.3	ENSG00000229043	9377	None	None
ERVL_7p22.3	HERV	ERVL	internal	chr7	1757630	1759683	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAD1L1	ENSG00000002822	56110	ELFN1	ENSG00000225968	9676	None	None
ERVLE_7p22.2a	HERV	ERVLE	internal	chr7	3626556	3628687	-	noncoding	SDK1	protein_coding	ANTISENSE	ENSG00000146555	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7p22.2b	HERV	ERVLE	internal	chr7	3841185	3842728	+	noncoding	SDK1	protein_coding	SENSE	ENSG00000146555	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_7p22.2	HERV	HERVL	prototype	chr7	4192955	4194878	-	noncoding	SDK1	protein_coding	ANTISENSE	ENSG00000146555	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_7p22.1	HERV	HML2	tandem*	chr7	4582426	4600400	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC072054.1	ENSG00000286874	41848	CYP3A54P	ENSG00000261809	70393	None	None
HARLEQUIN_7p22.1	HERV	HARLEQUIN	prototype	chr7	5020879	5028716	-	noncoding	RNF216P1,RBAK-RBAKDN	transcribed_unprocessed_pseudogene,protein_coding	ANTISENSE,ANTISENSE	ENSG00000196204,ENSG00000272968	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7p22.1a	HERV	ERVLE	internal	chr7	5649746	5650316	+	noncoding	RNF216	protein_coding	ANTISENSE	ENSG00000011275	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7p22.1	HERV	ERVLB4	oneside	chr7	6070143	6073177	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004895.1	ENSG00000231704	7527	EIF2AK1	ENSG00000086232	10968	None	None
HERVE_7p22.1a	HERV	HERVE	internal	chr7	6842371	6846454	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UNC93B2	ENSG00000155070	9031	OR7E39P	ENSG00000273252	6577	None	None
HERVE_7p22.1b	HERV	HERVE	internal	chr7	6871228	6875273	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR7E59P	ENSG00000250561	4354	OR7E136P	ENSG00000205897	3556	chr7:6873805-6874176	chr7:6874174-6874177
HERVH_7p22.1a	HERV	HERVH	prototype	chr7	6903791	6908992	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079804.2	ENSG00000243531	3168	ALG1L5P	ENSG00000226943	14812	None	chr7:6906060-6906065
HERVH_7p22.1b	HERV	HERVH	oneside	chr7	6948201	6950408	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079804.3	ENSG00000287860	2217	FAM86LP	ENSG00000242731	8598	None	None
HERVE_7p22.1c	HERV	HERVE	oneside	chr7	6950409	6958745	-	coding	AC079804.3	lncRNA	SENSE	ENSG00000287860	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_7p22.1c	HERV	HERVH	oneside	chr7	6958746	6962263	-	noncoding	AC079804.3	lncRNA	SENSE	ENSG00000287860	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVS71_7p22.1	HERV	HERVS71	prototype	chr7	6988359	6995705	-	coding	AC079804.3	lncRNA	SENSE	ENSG00000287860	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7p22.1b	HERV	ERVLE	internal	chr7	7044269	7045357	+	noncoding	AC079804.3	lncRNA	ANTISENSE	ENSG00000287860	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_7p22.1	HERV	MER4	prototype	chr7	7104905	7110650	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079804.3	ENSG00000287860	423	C1GALT1	ENSG00000106392	46284	None	None
HUERSP3B_7p21.3	HERV	HUERSP3B	prototype	chr7	7210436	7217353	-	noncoding	C1GALT1	protein_coding	ANTISENSE	ENSG00000106392	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_7p21.3a	HERV	HERVL	prototype	chr7	7721759	7728024	+	noncoding	UMAD1,AC007161.3	protein_coding,lncRNA	SENSE,SENSE	ENSG00000219545,ENSG00000283549	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7p21.3a	HERV	ERVLE	internal	chr7	8282202	8284756	+	noncoding	AC007128.1	lncRNA	SENSE	ENSG00000229970	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7p21.3b	HERV	ERVLE	internal	chr7	8392647	8396155	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NXPH1	ENSG00000122584	37454	AC007128.1	ENSG00000229970	48131	None	None
ERVLE_7p21.3c	HERV	ERVLE	internal	chr7	8703903	8706856	+	noncoding	NXPH1	protein_coding	SENSE	ENSG00000122584	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_7p21.3	HERV	HML1	prototype	chr7	9016704	9021146	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009500.1	ENSG00000236748	77335	AC004852.2	ENSG00000278254	61411	None	None
HERVW_7p21.3	HERV	HERVW	internal	chr7	9017444	9019835	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009500.1	ENSG00000236748	78075	AC004852.2	ENSG00000278254	62722	None	None
ERVLB4_7p21.3a	HERV	ERVLB4	oneside	chr7	9331778	9333350	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004852.2	ENSG00000278254	141921	GAPDHP68	ENSG00000233876	281628	None	None
HERVH_7p21.3a	HERV	HERVH	prototype	chr7	9353405	9359207	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP68	ENSG00000233876	255771	AC004852.2	ENSG00000278254	163548	None	None
ERVLE_7p21.3d	HERV	ERVLE	internal	chr7	9359635	9361221	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004852.2	ENSG00000278254	169778	GAPDHP68	ENSG00000233876	253757	None	None
HERVH_7p21.3b	HERV	HERVH	prototype	chr7	9457702	9464218	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP68	ENSG00000233876	150760	AC004852.2	ENSG00000278254	267845	None	None
MER61_7p21.3a	HERV	MER61	oneside	chr7	9663579	9667603	-	noncoding	AC060834.2	lncRNA	ANTISENSE	ENSG00000234710	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7p21.3a	HERV	ERV316A3	internal	chr7	9777561	9778097	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC060834.2	ENSG00000234710	8048	AC006363.1	ENSG00000270611	72827	None	None
HERVL_7p21.3b	HERV	HERVL	oneside	chr7	9816004	9819013	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006363.1	ENSG00000270611	31911	AC060834.2	ENSG00000234710	46491	None	None
ERV316A3_7p21.3b	HERV	ERV316A3	oneside	chr7	9883126	9884418	-	noncoding	AC010991.1	lncRNA	ANTISENSE	ENSG00000235431	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7p21.3b	HERV	ERVLB4	prototype	chr7	10029908	10035972	-	noncoding	AC004936.1	lncRNA	SENSE	ENSG00000287409	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_7p21.3	HERV	LTR25	internal	chr7	10212004	10212984	-	noncoding	AC004879.2	lncRNA	SENSE	ENSG00000286639	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7p21.3c	HERV	ERV316A3	internal	chr7	10302368	10303915	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004949.1	ENSG00000283117	145905	AC004879.2	ENSG00000286639	62505	None	None
MER41_7p21.3a	HERV	MER41	internal	chr7	10824498	10825924	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004949.1	ENSG00000283117	44554	AC007029.1	ENSG00000201774	76054	None	None
HARLEQUIN_7p21.3	HERV	HARLEQUIN	internal	chr7	10924789	10928245	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007029.1	ENSG00000201774	22715	NDUFA4	ENSG00000189043	3698	None	None
ERVLE_7p21.3e	HERV	ERVLE	oneside	chr7	10947966	10955535	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PHF14	ENSG00000106443	17801	AC007029.2	ENSG00000271185	7231	None	None
MER61_7p21.3b	HERV	MER61	oneside	chr7	11193019	11197826	+	noncoding	AC004160.1	lncRNA	SENSE	ENSG00000230333	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr7:11194741-11194748,chr7:11194701-11194714
ERVLE_7p21.3f	HERV	ERVLE	internal	chr7	11243769	11244896	+	noncoding	AC004160.1	lncRNA	SENSE	ENSG00000230333	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVL_7p21.3	HERV	ERVL	internal	chr7	11246038	11246864	+	noncoding	AC004160.1	lncRNA	SENSE	ENSG00000230333	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7p21.3g	HERV	ERVLE	internal	chr7	11331408	11333641	+	noncoding	AC004160.1	lncRNA	SENSE	ENSG00000230333	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:11332477-11332787	None
HERVL_7p21.3c	HERV	HERVL	prototype	chr7	11593897	11600164	+	coding	THSD7A	protein_coding	ANTISENSE	ENSG00000005108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7p21.3h	HERV	ERVLE	internal	chr7	11612963	11614190	+	noncoding	THSD7A	protein_coding	ANTISENSE	ENSG00000005108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7p21.3i	HERV	ERVLE	internal	chr7	11647236	11650355	-	noncoding	THSD7A	protein_coding	SENSE	ENSG00000005108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_7p21.3	HERV	HERVIP10F	prototype	chr7	12066556	12075419	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	THSD7A	ENSG00000005108	234358	TMEM106B	ENSG00000106460	135851	chr7:12066563-12066960	chr7:12066922-12066928
HERVL18_7p21.3	HERV	HERVL18	prototype	chr7	12090005	12093143	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	THSD7A	ENSG00000005108	257807	TMEM106B	ENSG00000106460	118127	None	None
ERVLB4_7p21.3c	HERV	ERVLB4	oneside	chr7	12145322	12149095	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM106B	ENSG00000106460	62175	THSD7A	ENSG00000005108	313124	None	None
ERVLE_7p21.3j	HERV	ERVLE	internal	chr7	12282912	12283571	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VWDE	ENSG00000146530	47314	TMEM106B	ENSG00000106460	39545	None	None
HERVFRD_7p21.3	HERV	HERVFRD	prototype	chr7	12302434	12304639	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM106B	ENSG00000106460	59067	VWDE	ENSG00000146530	26246	None	None
HERVFH21_7p21.3	HERV	HERVFH21	prototype	chr7	12588442	12595509	-	coding	SCIN	protein_coding	ANTISENSE	ENSG00000006747	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr7:12589342-12589351,chr7:12588536-12588543,chr7:12588953-12588961,chr7:12589047-12589059,chr7:12590836-12590843,chr7:12590937-12590940,chr7:12591400-12591409,chr7:12591411-12591422,chr7:12591655-12591664,chr7:12591881-12591891,chr7:12592413-12592429,chr7:12592549-12592574,chr7:12592637-12592640,chr7:12592646-12592649,chr7:12592753-12592764,chr7:12592767-12592780,chr7:12593085-12593095,chr7:12594512-12594515,chr7:12594572-12594578,chr7:12594629-12594635,chr7:12595189-12595228,chr7:12595229-12595238,chr7:12594556-12594566
HERVH_7p21.3c	HERV	HERVH	prototype	chr7	12659788	12665594	+	noncoding	SCIN	protein_coding	SENSE	ENSG00000006747	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
MER41_7p21.3b	HERV	MER41	internal	chr7	13311008	13313126	+	noncoding	AC011287.1	lncRNA	SENSE	ENSG00000229618	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_7p21.3	HERV	HERVL74	prototype	chr7	13447501	13453388	-	noncoding	AC011287.1	lncRNA	ANTISENSE	ENSG00000229618	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7p21.3d	HERV	ERVLB4	oneside	chr7	13626871	13628906	-	noncoding	AC011287.1	lncRNA	ANTISENSE	ENSG00000229618	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7p21.2a	HERV	ERV316A3	internal	chr7	14309582	14310850	+	noncoding	DGKB	protein_coding	ANTISENSE	ENSG00000136267	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7p21.2b	HERV	ERV316A3	internal	chr7	14311153	14312262	+	noncoding	DGKB	protein_coding	ANTISENSE	ENSG00000136267	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7p21.2c	HERV	ERV316A3	internal	chr7	14319922	14320791	-	noncoding	DGKB	protein_coding	SENSE	ENSG00000136267	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_7p21.2	HERV	MER41	internal	chr7	14740089	14745423	+	noncoding	DGKB	protein_coding	ANTISENSE	ENSG00000136267	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7p21.2a	HERV	ERVLB4	oneside	chr7	14793726	14800261	+	noncoding	DGKB	protein_coding	ANTISENSE	ENSG00000136267	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_7p21.2a	HERV	ERVL	oneside	chr7	14800645	14801850	+	noncoding	DGKB	protein_coding	ANTISENSE	ENSG00000136267	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_7p21.2a	HERV	HERVL74	oneside	chr7	14979662	14986900	-	noncoding	GTF3AP5	processed_pseudogene	SENSE	ENSG00000225816	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL74_7p21.2b	HERV	HERVL74	oneside	chr7	14987141	14989640	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006458.1	ENSG00000227489	76567	GTF3AP5	ENSG00000225816	1067	None	None
ERV316A3_7p21.2d	HERV	ERV316A3	oneside	chr7	15036204	15039152	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006458.1	ENSG00000227489	27055	GTF3AP5	ENSG00000225816	50130	None	None
ERVL_7p21.2b	HERV	ERVL	internal	chr7	15076561	15078333	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006458.1	ENSG00000227489	7910	AGMO	ENSG00000187546	121984	None	None
ERVLE_7p21.2	HERV	ERVLE	internal	chr7	15110579	15114477	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006458.1	ENSG00000227489	41928	AGMO	ENSG00000187546	85840	None	None
ERVL_7p21.2c	HERV	ERVL	unknown	chr7	15702205	15704874	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL36AP26	ENSG00000235828	453	AC006041.2	ENSG00000286376	31499	None	None
ERVLB4_7p21.2b	HERV	ERVLB4	oneside	chr7	15980175	15981507	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CRPPA	ENSG00000214960	106018	AC006041.1	ENSG00000229379	137815	None	None
ERVLB4_7p21.2c	HERV	ERVLB4	internal	chr7	15981569	15982484	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CRPPA	ENSG00000214960	105041	AC006041.1	ENSG00000229379	139209	None	None
MER4_7p21.1	HERV	MER4	prototype	chr7	17106411	17112069	+	noncoding	AHR,AC073332.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000106546,ENSG00000237773	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_7p21.1	HERV	MER4B	internal	chr7	17107984	17108837	+	noncoding	AHR,AC073332.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000106546,ENSG00000237773	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_7p21.1a	HERV	HERVH	prototype	chr7	17414063	17420763	+	noncoding	AC019117.4,AC019117.3,AC019117.2	protein_coding,lncRNA,lncRNA	SENSE,SENSE,ANTISENSE	ENSG00000283321,ENSG00000236318,ENSG00000236039	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7p21.1a	HERV	ERVLB4	oneside	chr7	19018904	19023669	-	noncoding	TWIST1	protein_coding	SENSE	ENSG00000122691	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
MER61_7p21.1	HERV	MER61	oneside	chr7	19339195	19343560	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC003986.1	ENSG00000229533	192942	AC007091.1	ENSG00000223838	9971	None	None
HERV9_7p21.1	HERV	HERV9	prototype	chr7	19653808	19660919	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TWISTNB	ENSG00000105849	34542	AC007091.1	ENSG00000223838	75202	None	None
ERVLB4_7p21.1b	HERV	ERVLB4	oneside	chr7	19861218	19863296	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005062.1	ENSG00000243004	55685	AC004543.1	ENSG00000237921	43128	None	None
HERVH_7p21.1b	HERV	HERVH	prototype	chr7	20120709	20126555	+	noncoding	AC005062.1,AC007001.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000243004,ENSG00000267055	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr7:20124075-20124485	chr7:20123088-20123102,chr7:20125406-20125414
HUERSP2_7p21.1	HERV	HUERSP2	prototype	chr7	20439558	20443344	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ITGB8	ENSG00000105855	23804	EEF1A1P27	ENSG00000179460	138728	None	chr7:20440160-20440162
HERVH_7p21.1c	HERV	HERVH	prototype	chr7	20546709	20551693	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ITGB8	ENSG00000105855	130955	EEF1A1P27	ENSG00000179460	30379	None	None
HERVFRD_7p15.3	HERV	HERVFRD	oneside	chr7	21450763	21457089	-	noncoding	SP4	protein_coding	ANTISENSE	ENSG00000105866	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_7p15.3a	HERV	HERVP71A	prototype	chr7	21500880	21508396	-	coding	SP4	protein_coding	ANTISENSE	ENSG00000105866	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_7p15.3b	HERV	HERVP71A	prototype	chr7	21547317	21556347	-	noncoding	DNAH11	protein_coding	ANTISENSE	ENSG00000105877	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr7:21553095-21553096
ERV316A3_7p15.3a	HERV	ERV316A3	internal	chr7	22099082	22102480	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAPGEF5	ENSG00000136237	15756	CDCA7L	ENSG00000164649	153179	None	None
ERVLB4_7p15.3	HERV	ERVLB4	internal	chr7	22544753	22545680	+	noncoding	STEAP1B	protein_coding	ANTISENSE	ENSG00000105889	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7p15.3b	HERV	ERV316A3	prototype	chr7	22656846	22661312	+	noncoding	STEAP1B	protein_coding	ANTISENSE	ENSG00000105889	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_7p15.3a	HERV	HERVH	prototype	chr7	22703358	22709313	+	noncoding	STEAP1B	protein_coding	ANTISENSE	ENSG00000105889	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr7:22703659-22703663
MER4B_7p15.3	HERV	MER4B	internal	chr7	22744511	22745642	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCYBP42	ENSG00000228803	2033	IL6	ENSG00000136244	12509	None	None
MER61_7p15.3	HERV	MER61	prototype	chr7	22801905	22808598	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073072.1	ENSG00000234513	27912	TOMM7	ENSG00000196683	4030	None	chr7:22802247-22802255
HERVH_7p15.3b	HERV	HERVH	prototype	chr7	22913465	22918928	+	noncoding	FAM126A	protein_coding	ANTISENSE	ENSG00000122591	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7p15.3a	HERV	ERVLE	internal	chr7	22936049	22936883	-	noncoding	FAM126A	protein_coding	SENSE	ENSG00000122591	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_7p15.3	HERV	PRIMA41	oneside	chr7	23081373	23086085	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KLHL7-DT	ENSG00000230658	14129	FAM126A	ENSG00000122591	67243	None	None
HERVI_7p15.3	HERV	HERVI	oneside	chr7	23653708	23656659	+	noncoding	AC006026.2	processed_pseudogene	SENSE	ENSG00000228953	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_7p15.3	HERV	HERVIP10F	oneside	chr7	23656681	23659323	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006026.2	ENSG00000228953	820	FAM221A	ENSG00000188732	20807	None	None
ERVLE_7p15.3b	HERV	ERVLE	internal	chr7	23703575	23705572	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM221A	ENSG00000188732	326	STK31	ENSG00000196335	4631	None	None
ERV316A3_7p15.3c	HERV	ERV316A3	oneside	chr7	24055552	24057464	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP228	ENSG00000252041	75241	AC003087.1	ENSG00000227930	158217	None	None
HERVH_7p15.3c	HERV	HERVH	prototype	chr7	24396245	24401985	+	noncoding	AC003044.1	lncRNA	ANTISENSE	ENSG00000287523	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:24398797-24399118	chr7:24396570-24396593
HARLEQUIN_7p15.3	HERV	HARLEQUIN	prototype	chr7	24789291	24795789	-	coding	AC003093.1	lncRNA	SENSE	ENSG00000287093	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr7:24788882-24789353	chr7:24795175-24795186,chr7:24795442-24795464,chr7:24795480-24795508,chr7:24795533-24795544
ERVLE_7p15.3c	HERV	ERVLE	internal	chr7	25163396	25165456	+	noncoding	C7orf31	protein_coding	ANTISENSE	ENSG00000153790	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_7p15.3	HERV	HERVL40	internal	chr7	25249899	25252738	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPVF	ENSG00000105954	21413	AC004129.4	ENSG00000285716	2227	None	None
HERVH_7p15.2	HERV	HERVH	prototype	chr7	26024200	26029809	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NFE2L3	ENSG00000050344	122389	MIR148A	ENSG00000199085	74214	None	None
HERVL_7p15.2a	HERV	HERVL	oneside	chr7	26122901	26125681	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR148A	ENSG00000199085	172915	NFE2L3	ENSG00000050344	26517	None	None
HERVH48_7p15.2	HERV	HERVH48	oneside	chr7	26244062	26250593	+	noncoding	AC010677.2	lncRNA	ANTISENSE	ENSG00000285860	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_7p15.2	HERV	MER4B	internal	chr7	26256985	26260091	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010677.1	ENSG00000232383	16104	AC010677.2	ENSG00000285860	2276	None	None
HERVL_7p15.2b	HERV	HERVL	oneside	chr7	26996592	27002445	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SKAP2	ENSG00000005020	1353	TPM3P4	ENSG00000214869	21292	None	None
ERVLE_7p14.3a	HERV	ERVLE	internal	chr7	28975149	28979775	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005013.1	ENSG00000228421	15804	AC005162.2	ENSG00000272568	192	None	None
MER61_7p14.3a	HERV	MER61	prototype	chr7	29297008	29299249	-	noncoding	AC004593.2,CHN2	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000285162,ENSG00000106069	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVS71_7p14.3	HERV	HERVS71	prototype	chr7	29636372	29646401	-	coding	ZNRF2P2	transcribed_processed_pseudogene	SENSE	ENSG00000225264	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:29646397-29646721	None
HERVH_7p14.3a	HERV	HERVH	prototype	chr7	29784992	29792525	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DPY19L2P3	ENSG00000227855	42398	WIPF3	ENSG00000122574	13961	None	None
HERVH_7p14.3b	HERV	HERVH	prototype	chr7	30479569	30485283	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NOD1	ENSG00000106100	785	GGCT	ENSG00000006625	11338	chr7:30479458-30479847	None
HML1_7p14.3a	HERV	HML1	oneside	chr7	30536160	30537509	+	noncoding	AC005154.5,GARS-DT	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000281039,ENSG00000196295	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_7p14.3b	HERV	HML1	oneside	chr7	30543642	30546185	+	noncoding	AC005154.5,GARS-DT,AC005154.1	protein_coding,lncRNA,processed_pseudogene	ANTISENSE,ANTISENSE,SENSE	ENSG00000281039,ENSG00000196295,ENSG00000226874	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_7p14.3a	HERV	MER4	oneside	chr7	30567785	30571827	+	noncoding	GARS-DT	lncRNA	ANTISENSE	ENSG00000196295	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr7:30571543-30571546
MER4_7p14.3b	HERV	MER4	oneside	chr7	30579723	30584961	+	noncoding	GARS-DT	lncRNA	ANTISENSE	ENSG00000196295	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_7p14.3	HERV	HARLEQUIN	prototype	chr7	30807527	30811981	+	noncoding	INMT-MINDY4,MINDY4	protein_coding,protein_coding	SENSE,SENSE	ENSG00000254959,ENSG00000106125	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7p14.3b	HERV	ERVLE	internal	chr7	31206918	31208730	-	noncoding	AC006398.1	lncRNA	ANTISENSE	ENSG00000286487	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_7p14.3c	HERV	HERVH	prototype	chr7	31466860	31472379	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ITPRID1	ENSG00000180347	41692	AC005090.1	ENSG00000231418	45557	None	None
LTR19_7p14.3	HERV	LTR19	oneside	chr7	31539598	31543430	-	noncoding	ITPRID1	protein_coding	ANTISENSE	ENSG00000180347	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_7p14.3c	HERV	MER4	oneside	chr7	32515103	32516266	+	noncoding	AVL9	protein_coding	SENSE	ENSG00000105778	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_7p14.3	HERV	MER4B	oneside	chr7	32516285	32528428	+	noncoding	AVL9	protein_coding	SENSE	ENSG00000105778	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_7p14.3b	HERV	MER61	prototype	chr7	32525882	32527007	-	noncoding	AVL9	protein_coding	ANTISENSE	ENSG00000105778	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_7p14.3d	HERV	HERVH	prototype	chr7	32832561	32838271	+	noncoding	DPY19L1P2	unprocessed_pseudogene	SENSE	ENSG00000231952	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_7p14.3e	HERV	HERVH	prototype	chr7	32838742	32843539	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018648.1	ENSG00000272905	1855	DPY19L1P2	ENSG00000231952	172	None	None
MER101_7p14.3	HERV	MER101	internal	chr7	33124151	33128321	+	noncoding	BBS9	protein_coding	SENSE	ENSG00000122507	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_7p14.3	HERV	MER41	oneside	chr7	33181421	33185349	-	noncoding	BBS9	protein_coding	ANTISENSE	ENSG00000122507	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7p14.3c	HERV	ERVLE	internal	chr7	33204936	33205853	-	noncoding	BBS9	protein_coding	ANTISENSE	ENSG00000122507	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_7p14.3f	HERV	HERVH	prototype	chr7	34300132	34305572	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPSR1-AS1	ENSG00000197085	40940	AC009262.1	ENSG00000236212	1120	None	None
ERV316A3_7p14.3	HERV	ERV316A3	internal	chr7	34772796	34775289	-	noncoding	NPSR1-AS1,NPSR1	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000197085,ENSG00000187258	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7p14.2a	HERV	ERVLE	internal	chr7	35272227	35275771	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007652.3	ENSG00000287651	38067	AC009531.1	ENSG00000226063	12498	None	chr7:35273421-35273422
ERVLE_7p14.2b	HERV	ERVLE	oneside	chr7	35592268	35594015	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007652.1	ENSG00000235464	82005	AC018647.3	ENSG00000287032	20635	None	None
ERVLE_7p14.2c	HERV	ERVLE	internal	chr7	35703423	35704779	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018647.2	ENSG00000271122	4010	AC018647.1	ENSG00000227544	10253	None	None
HML3_7p14.2	HERV	HML3	oneside	chr7	35910279	35912628	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SEPTIN7	ENSG00000122545	3174	RNU6-1085P	ENSG00000200446	17530	None	None
HERVL18_7p14.2	HERV	HERVL18	oneside	chr7	36472690	36474452	-	noncoding	AC006960.3	lncRNA	ANTISENSE	ENSG00000237400	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_7p14.2	HERV	HERV9	prototype	chr7	36499269	36505045	-	noncoding	AC006960.3	lncRNA	ANTISENSE	ENSG00000237400	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7p14.2d	HERV	ERVLE	internal	chr7	36771609	36772370	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007349.1	ENSG00000229424	8528	AC007349.3	ENSG00000235728	8638	None	None
HERV9_7p14.1	HERV	HERV9	oneside	chr7	37202715	37205100	-	noncoding	ELMO1	protein_coding	SENSE	ENSG00000155849	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7p14.1	HERV	ERVLB4	internal	chr7	37430998	37432319	+	noncoding	ELMO1	protein_coding	ANTISENSE	ENSG00000155849	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7p14.1a	HERV	ERVLE	internal	chr7	37655667	37657425	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GPR141	ENSG00000187037	26371	NECAP1P1	ENSG00000178503	69338	None	None
ERVLE_7p14.1b	HERV	ERVLE	internal	chr7	38128506	38129547	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STARD3NL	ENSG00000010270	48675	SFRP4	ENSG00000106483	102811	None	None
HML5_7p14.1	HERV	HML5	prototype	chr7	38159987	38164084	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SFRP4	ENSG00000106483	134292	STARD3NL	ENSG00000010270	14138	None	None
MER4B_7p14.1	HERV	MER4B	oneside	chr7	39717831	39719693	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00265	ENSG00000188185	13737	RALA	ENSG00000006451	9711	None	None
HERVIP10F_7p14.1	HERV	HERVIP10F	oneside	chr7	39759203	39761816	+	noncoding	LINC00265	lncRNA	SENSE	ENSG00000188185	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7p14.1c	HERV	ERVLE	internal	chr7	39916478	39918529	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC072061.1	ENSG00000259826	28993	RN7SL496P	ENSG00000242855	27814	None	None
HERVIP10FH_7p14.1	HERV	HERVIP10FH	prototype	chr7	40141753	40148302	-	noncoding	SUGCT	protein_coding	ANTISENSE	ENSG00000175600	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVW_7p14.1	HERV	HERVW	prototype	chr7	40167438	40173763	-	noncoding	SUGCT	protein_coding	ANTISENSE	ENSG00000175600	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7p14.1a	HERV	ERV316A3	oneside	chr7	41279639	41280843	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01449	ENSG00000224017	146132	INHBA	ENSG00000122641	386325	None	None
PRIMA41_7p14.1a	HERV	PRIMA41	oneside	chr7	41547054	41549561	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	INHBA	ENSG00000122641	117607	LINC01449	ENSG00000224017	413547	None	None
PRIMA41_7p14.1b	HERV	PRIMA41	oneside	chr7	41553289	41559722	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	INHBA	ENSG00000122641	107446	LINC01449	ENSG00000224017	419782	None	None
MER41_7p14.1a	HERV	MER41	prototype	chr7	41745785	41751231	-	noncoding	INHBA-AS1	lncRNA	ANTISENSE	ENSG00000224116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_7p14.1	HERV	PABLA	internal	chr7	41754307	41757785	-	noncoding	INHBA-AS1	lncRNA	ANTISENSE	ENSG00000224116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_7p14.1b	HERV	MER41	oneside	chr7	41757785	41760009	-	noncoding	INHBA-AS1	lncRNA	ANTISENSE	ENSG00000224116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7p14.1b	HERV	ERV316A3	oneside	chr7	41933917	41936920	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	INHBA-AS1	ENSG00000224116	154529	GLI3	ENSG00000106571	24029	None	None
LTR57_7p14.1	HERV	LTR57	internal	chr7	42545810	42547126	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01448	ENSG00000238284	114590	GLI3	ENSG00000106571	307940	None	None
HML3_7p14.1	HERV	HML3	internal	chr7	42636040	42637107	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GLI3	ENSG00000106571	398170	LINC01448	ENSG00000238284	24609	None	None
HERVH_7p14.1	HERV	HERVH	prototype	chr7	42870576	42876404	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010132.4	ENSG00000261019	24868	AC010132.1	ENSG00000231539	26138	None	None
HERVL74_7p14.1	HERV	HERVL74	internal	chr7	42889719	42892557	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010132.1	ENSG00000231539	45281	AC010132.4	ENSG00000261019	8715	None	None
MER61_7p14.1	HERV	MER61	prototype	chr7	43071466	43078048	-	coding	AC005537.2	lncRNA	SENSE	ENSG00000232006	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr7:43077798-43078033	chr7:43076364-43076383
HUERSP3B_7p13	HERV	HUERSP3B	oneside	chr7	43666199	43669761	+	noncoding	COA1	protein_coding	ANTISENSE	ENSG00000106603	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_7p13	HERV	HML6	oneside	chr7	43808543	43809894	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BLVRA	ENSG00000106605	1201	MRPS24	ENSG00000062582	56664	None	None
HERVIP10F_7p13	HERV	HERVIP10F	oneside	chr7	43810212	43812640	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BLVRA	ENSG00000106605	2870	MRPS24	ENSG00000062582	53918	None	None
HERVIP10FH_7p13	HERV	HERVIP10FH	mergeable*	chr7	43812642	43823897	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BLVRA	ENSG00000106605	5300	MRPS24	ENSG00000062582	42661	chr7:43814819-43815100	None
HUERSP1_7p13	HERV	HUERSP1	oneside	chr7	43826611	43832906	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BLVRA	ENSG00000106605	19269	MRPS24	ENSG00000062582	33652	None	None
HML3_7p13	HERV	HML3	prototype	chr7	43859699	43864985	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPS24	ENSG00000062582	1573	BLVRA	ENSG00000106605	52357	None	None
MER61_7p13	HERV	MER61	oneside	chr7	43914879	43917749	+	noncoding	URGCP	protein_coding	ANTISENSE	ENSG00000106608	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_7p13	HERV	LTR25	internal	chr7	43920222	43921624	+	noncoding	URGCP	protein_coding	ANTISENSE	ENSG00000106608	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_7p13	HERV	HERVL	internal	chr7	44177920	44182852	+	noncoding	GCK	protein_coding	ANTISENSE	ENSG00000106633	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_7p13	HERV	HERVFRD	internal	chr7	44717448	44722427	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZMIZ2	ENSG00000122515	26154	OGDH	ENSG00000105953	8382	None	None
ERV316A3_7p13a	HERV	ERV316A3	oneside	chr7	45050816	45054421	-	noncoding	CCM2	protein_coding	ANTISENSE	ENSG00000136280	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7p13b	HERV	ERV316A3	internal	chr7	45150983	45151618	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAMP3	ENSG00000122679	6173	TBRG4	ENSG00000136270	38936	None	None
ERVLB4_7p13	HERV	ERVLB4	oneside	chr7	45253743	45256732	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073968.2	ENSG00000286738	11949	RAMP3	ENSG00000122679	67441	None	None
MER4_7p13	HERV	MER4	prototype	chr7	45288992	45290711	+	noncoding	AC073968.2	lncRNA	SENSE	ENSG00000286738	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7p12.3a	HERV	ERVLB4	oneside	chr7	45468677	45471314	+	noncoding	AC073325.1	lncRNA	SENSE	ENSG00000225537	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_7p12.3a	HERV	HERVL	oneside	chr7	45545744	45548737	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADCY1	ENSG00000164742	25403	AC073325.1	ENSG00000225537	3562	None	None
HERVL_7p12.3b	HERV	HERVL	oneside	chr7	45549395	45552820	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073325.1	ENSG00000225537	7213	ADCY1	ENSG00000164742	21320	None	None
ERVLB4_7p12.3b	HERV	ERVLB4	internal	chr7	45683033	45683921	-	noncoding	ADCY1	protein_coding	ANTISENSE	ENSG00000164742	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7p12.3c	HERV	ERVLB4	oneside	chr7	45894628	45897723	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGFBP3	ENSG00000146674	14522	IGFBP1	ENSG00000146678	968	None	None
HML3_7p12.3a	HERV	HML3	oneside	chr7	46038208	46043831	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF619P1	ENSG00000224547	101106	AC073115.1	ENSG00000229628	37310	None	None
HML3_7p12.3b	HERV	HML3	oneside	chr7	46043889	46045152	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF619P1	ENSG00000224547	99785	AC073115.1	ENSG00000229628	42991	None	None
HUERSP3_7p12.3	HERV	HUERSP3	oneside	chr7	46463467	46471647	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004869.2	ENSG00000240355	4810	AC023669.2	ENSG00000237760	119846	None	None
ERVLE_7p12.3	HERV	ERVLE	internal	chr7	46515872	46517250	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN1P19	ENSG00000224519	117364	AC004869.1	ENSG00000230680	34294	None	None
MER41_7p12.3	HERV	MER41	prototype	chr7	46522688	46529624	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004869.1	ENSG00000230680	41110	HMGN1P19	ENSG00000224519	104990	None	None
ERVLB4_7p12.3d	HERV	ERVLB4	prototype	chr7	46653888	46660477	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011294.1	ENSG00000233539	13308	HMGN1P19	ENSG00000224519	18942	None	None
HUERSP1_7p12.3a	HERV	HUERSP1	oneside	chr7	46768071	46770455	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011294.1	ENSG00000233539	8220	EPS15P1	ENSG00000242948	10918	None	None
HUERSP2_7p12.3	HERV	HUERSP2	prototype	chr7	47596039	47600882	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TNS3	ENSG00000136205	13481	LINC01447	ENSG00000236078	7583	chr7:47596597-47596995	None
MER34B_7p12.3	HERV	MER34B	internal	chr7	48119468	48121414	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UPP1	ENSG00000183696	10732	ABCA13	ENSG00000179869	50044	None	None
MER61_7p12.3a	HERV	MER61	internal	chr7	48134332	48135411	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ABCA13	ENSG00000179869	36047	UPP1	ENSG00000183696	25596	None	None
HML5_7p12.3	HERV	HML5	prototype	chr7	48140030	48144674	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UPP1	ENSG00000183696	31294	ABCA13	ENSG00000179869	26784	None	None
ERVLB4_7p12.3e	HERV	ERVLB4	prototype	chr7	48167972	48170161	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UPP1	ENSG00000183696	59236	ABCA13	ENSG00000179869	1297	None	None
HUERSP1_7p12.3b	HERV	HUERSP1	internal	chr7	48667958	48669247	-	noncoding	AC091770.1	lncRNA	SENSE	ENSG00000228173	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7p12.3f	HERV	ERVLB4	internal	chr7	48720573	48721555	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02838	ENSG00000285536	8991	AC004899.1	ENSG00000225705	124871	None	None
MER61_7p12.3b	HERV	MER61	prototype	chr7	48889748	48895304	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004899.1	ENSG00000225705	36850	GDI2P1	ENSG00000229165	7252	None	None
ERVLE_7p12.2a	HERV	ERVLE	internal	chr7	49030348	49031441	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091730.1	ENSG00000234686	198696	CDC14C	ENSG00000218305	102894	None	None
ERV316A3_7p12.2a	HERV	ERV316A3	internal	chr7	49099790	49100303	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091730.1	ENSG00000234686	129834	CDC14C	ENSG00000218305	172336	None	None
MER61_7p12.2a	HERV	MER61	prototype	chr7	49376330	49382634	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DDX43P2	ENSG00000270763	116484	AC092448.1	ENSG00000286995	141574	None	None
ERVLE_7p12.2b	HERV	ERVLE	internal	chr7	49722463	49723515	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093775.1	ENSG00000279104	37382	AC092448.1	ENSG00000286995	135298	None	None
ERV316A3_7p12.2b	HERV	ERV316A3	internal	chr7	49925111	49925797	-	noncoding	ZPBP	protein_coding	SENSE	ENSG00000042813	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7p12.2c	HERV	ERVLE	internal	chr7	49927075	49929264	-	noncoding	ZPBP	protein_coding	SENSE	ENSG00000042813	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_7p12.2b	HERV	MER61	oneside	chr7	49985692	49990574	+	noncoding	ZPBP	protein_coding	ANTISENSE	ENSG00000042813	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7p12.2	HERV	ERVLB4	oneside	chr7	49993606	49999898	-	noncoding	ZPBP	protein_coding	SENSE	ENSG00000042813	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_7p12.2	HERV	MER4B	internal	chr7	50487055	50490112	+	noncoding	FIGNL1,DDC	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000132436,ENSG00000132437	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_7p12.2	HERV	MER4	oneside	chr7	50490099	50491999	+	noncoding	FIGNL1,DDC	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000132436,ENSG00000132437	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11_7p12.1	HERV	HERVK11	prototype	chr7	50576977	50583954	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DDC	ENSG00000132437	11572	GRB10	ENSG00000106070	6109	None	chr7:50579334-50579337
ERV316A3_7p12.1a	HERV	ERV316A3	internal	chr7	50858525	50860175	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009296.1	ENSG00000228085	14793	AC004830.2	ENSG00000228204	6572	None	None
ERVL_7p12.1a	HERV	ERVL	oneside	chr7	51060297	51062031	+	noncoding	COBL	protein_coding	ANTISENSE	ENSG00000106078	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7p12.1a	HERV	ERVLB4	oneside	chr7	51333061	51336472	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CICP17	ENSG00000227233	45812	COBL	ENSG00000106078	16243	None	None
MER61_7p12.1	HERV	MER61	prototype	chr7	51445953	51448241	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012441.1	ENSG00000227080	56839	AC005999.2	ENSG00000285741	23476	None	None
ERVLE_7p12.1a	HERV	ERVLE	internal	chr7	51464441	51465329	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005999.2	ENSG00000285741	6388	AC012441.1	ENSG00000227080	75327	None	None
ERVLE_7p12.1b	HERV	ERVLE	internal	chr7	51819583	51820870	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006478.2	ENSG00000287039	28216	AC006478.1	ENSG00000286987	38421	None	None
HERVH_7p12.1a	HERV	HERVH	oneside	chr7	51869850	51872089	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006478.2	ENSG00000287039	5052	AC079763.1	ENSG00000233960	293146	None	None
ERVL_7p12.1b	HERV	ERVL	oneside	chr7	52143786	52145642	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006478.2	ENSG00000287039	278988	AC079763.1	ENSG00000233960	19593	None	None
ERVLE_7p12.1c	HERV	ERVLE	internal	chr7	52242403	52243788	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006320.1	ENSG00000253028	25649	AC079763.1	ENSG00000233960	49490	None	None
HERV9_7p12.1	HERV	HERV9	oneside	chr7	52294853	52297269	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006320.1	ENSG00000253028	25284	AC006459.1	ENSG00000286908	195883	None	chr7:52295183-52295188
ERVLB4_7p12.1b	HERV	ERVLB4	oneside	chr7	52300734	52304110	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006320.1	ENSG00000253028	31165	AC006459.1	ENSG00000286908	189042	None	None
ERVLB4_7p12.1c	HERV	ERVLB4	oneside	chr7	52311084	52313173	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006459.1	ENSG00000286908	179979	AC006320.1	ENSG00000253028	41515	None	None
HERVH_7p12.1b	HERV	HERVH	prototype	chr7	52332923	52339041	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006459.1	ENSG00000286908	154111	AC006320.1	ENSG00000253028	63354	None	None
HERVL_7p12.1	HERV	HERVL	oneside	chr7	52387645	52391645	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006320.1	ENSG00000253028	118076	AC006459.1	ENSG00000286908	101507	None	None
ERV316A3_7p12.1b	HERV	ERV316A3	oneside	chr7	52466780	52468074	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006320.1	ENSG00000253028	197211	AC006459.1	ENSG00000286908	25078	None	None
ERVLB4_7p12.1d	HERV	ERVLB4	internal	chr7	52873266	52876152	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SGO1P2	ENSG00000234304	15685	AC006459.1	ENSG00000286908	369832	None	None
HERVL40_7p12.1	HERV	HERVL40	oneside	chr7	53098838	53099966	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HAUS6P1	ENSG00000227344	87422	POM121L12	ENSG00000221900	61913	None	None
ERVLB4_7p12.1e	HERV	ERVLB4	internal	chr7	53184635	53185645	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HAUS6P1	ENSG00000227344	1743	POM121L12	ENSG00000221900	147710	None	None
ERVLB4_7p12.1f	HERV	ERVLB4	internal	chr7	53188928	53189794	+	noncoding	HAUS6P1	processed_pseudogene	SENSE	ENSG00000227344	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_7p12.1	HERV	HARLEQUIN	internal	chr7	53234504	53235931	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HAUS6P1	ENSG00000227344	45566	RNF138P2	ENSG00000271194	80218	None	None
MER4_7p12.1	HERV	MER4	prototype	chr7	53336881	53343720	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNF138P2	ENSG00000271194	20141	RNU1-14P	ENSG00000199629	22338	None	None
ERV316A3_7p12.1c	HERV	ERV316A3	internal	chr7	53364457	53365157	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-14P	ENSG00000199629	901	RNF138P2	ENSG00000271194	47717	None	None
ERVLE_7p12.1d	HERV	ERVLE	internal	chr7	53421066	53421945	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-14P	ENSG00000199629	54857	RN7SKP218	ENSG00000222154	68203	None	None
ERV316A3_7p12.1d	HERV	ERV316A3	internal	chr7	53521005	53521557	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009468.2	ENSG00000234105	3889	AC009468.1	ENSG00000228627	37657	None	None
ERV316A3_7p12.1e	HERV	ERV316A3	internal	chr7	53637963	53638954	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009468.1	ENSG00000228627	63408	LINC01446	ENSG00000205628	16554	None	None
HERVL_7p11.2a	HERV	HERVL	oneside	chr7	53905106	53909288	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HAUS6P3	ENSG00000235454	41767	LINC02854	ENSG00000238131	17388	None	None
HERV9_7p11.2	HERV	HERV9	prototype	chr7	53954700	53962987	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092848.2	ENSG00000287953	222084	LINC02854	ENSG00000238131	6896	None	None
HERVL_7p11.2b	HERV	HERVL	prototype	chr7	54121735	54128405	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092848.2	ENSG00000287953	56666	LINC02854	ENSG00000238131	173931	None	None
MER4B_7p11.2	HERV	MER4B	oneside	chr7	54160295	54167167	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092848.2	ENSG00000287953	17904	LINC02854	ENSG00000238131	212491	None	None
MER4_7p11.2a	HERV	MER4	oneside	chr7	54167180	54168669	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092848.2	ENSG00000287953	16402	LINC02854	ENSG00000238131	219376	None	None
PABLA_7p11.2a	HERV	PABLA	oneside	chr7	54387408	54391464	-	noncoding	LINC01445	lncRNA	ANTISENSE	ENSG00000231427	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_7p11.2b	HERV	PABLA	oneside	chr7	54391675	54393967	-	noncoding	LINC01445	lncRNA	ANTISENSE	ENSG00000231427	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_7p11.2a	HERV	HML3	prototype	chr7	54448839	54455180	+	noncoding	LINC01445	lncRNA	SENSE	ENSG00000231427	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_7p11.2b	HERV	MER4	oneside	chr7	54630789	54632509	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1125P	ENSG00000200471	9658	RPL31P35	ENSG00000232612	23849	None	None
MER4_7p11.2c	HERV	MER4	oneside	chr7	54706580	54709328	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011228.2	ENSG00000286404	12396	AC011228.3	ENSG00000288525	29211	None	None
MER4_7p11.2d	HERV	MER4	prototype	chr7	54740636	54744207	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011228.2	ENSG00000286404	9589	SEC61G	ENSG00000132432	8043	None	None
HERVL_7p11.2c	HERV	HERVL	oneside	chr7	54949120	54952858	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EGFR	ENSG00000146648	66159	AC006971.1	ENSG00000218586	10936	None	None
MER4_7p11.2e	HERV	MER4	oneside	chr7	55295272	55299654	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073347.1	ENSG00000230936	42662	CALM1P2	ENSG00000230564	35016	None	None
MER4_7p11.2f	HERV	MER4	prototype	chr7	55623928	55630660	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDC42P2	ENSG00000234844	7614	AC099681.2	ENSG00000231394	28922	None	chr7:55629799-55629805
LTR23_7p11.2	HERV	LTR23	internal	chr7	55630996	55632132	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099681.2	ENSG00000231394	35990	CDC42P2	ENSG00000234844	6142	None	None
HML3_7p11.2b	HERV	HML3	prototype	chr7	56144893	56153451	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NUPR2	ENSG00000185290	28476	AC006970.1	ENSG00000230191	9694	None	None
HML3_7p11.2c	HERV	HML3	prototype	chr7	56316940	56322781	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073136.2	ENSG00000224155	11414	AC093392.1	ENSG00000203462	23	None	None
HERVL_7p11.2d	HERV	HERVL	internal	chr7	56606550	56607175	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC095038.5	ENSG00000287019	7909	AC092447.9	ENSG00000271047	2997	None	None
MER61_7p11.2	HERV	MER61	prototype	chr7	56620420	56626030	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC095038.5	ENSG00000287019	2463	TRIM60P16	ENSG00000229909	5709	None	None
MER41_7p11.2a	HERV	MER41	oneside	chr7	57134085	57137544	+	noncoding	ZNF479	protein_coding	ANTISENSE	ENSG00000185177	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7p11.2a	HERV	ERVLE	internal	chr7	57279284	57280606	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099654.4	ENSG00000274299	4087	AC237221.2	ENSG00000280225	121575	None	None
MER41_7p11.2b	HERV	MER41	oneside	chr7	57443873	57448457	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF716	ENSG00000182111	1720	SAPCD2P2	ENSG00000235368	18197	None	None
ERVLE_7p11.2b	HERV	ERVLE	internal	chr7	57729769	57730859	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC064862.3	ENSG00000234085	74377	AC023141.4	ENSG00000227015	39760	None	None
MER41_7q11.21a	HERV	MER41	oneside	chr7	63305752	63312295	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF733P	ENSG00000185037	1696	AC006455.1	ENSG00000226587	14379	None	None
MER41_7q11.21b	HERV	MER41	oneside	chr7	63435897	63442437	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF734P	ENSG00000197990	7382	AC073188.2	ENSG00000227305	13844	None	None
MER101_7q11.21a	HERV	MER101	internal	chr7	64049062	64050274	-	noncoding	AC115220.2,ZNF727	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000285544,ENSG00000214652	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_7q11.21c	HERV	MER41	internal	chr7	64193328	64194310	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SAPCD2P1	ENSG00000213644	10435	ZNF735	ENSG00000223614	12780	None	None
MER41_7q11.21d	HERV	MER41	internal	chr7	64194342	64197966	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SAPCD2P1	ENSG00000213644	11449	ZNF735	ENSG00000223614	9124	None	None
MER41_7q11.21e	HERV	MER41	internal	chr7	64198767	64201287	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF735	ENSG00000223614	5803	SAPCD2P1	ENSG00000213644	15874	None	None
MER41_7q11.21f	HERV	MER41	internal	chr7	64201339	64202470	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF735	ENSG00000223614	4620	SAPCD2P1	ENSG00000213644	18446	None	None
MER41_7q11.21g	HERV	MER41	oneside	chr7	64202578	64205419	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF735	ENSG00000223614	1671	SAPCD2P1	ENSG00000213644	19685	None	None
MER41_7q11.21h	HERV	MER41	oneside	chr7	64243876	64247361	-	noncoding	ZNF679	protein_coding	ANTISENSE	ENSG00000197123	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_7q11.21b	HERV	MER101	internal	chr7	64317855	64318794	-	noncoding	ZNF736	protein_coding	ANTISENSE	ENSG00000234444	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_7q11.21	HERV	MER61	prototype	chr7	64362011	64367703	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073270.2	ENSG00000287985	1538	ZNF736	ENSG00000234444	5377	None	None
HERVL_7q11.21a	HERV	HERVL	oneside	chr7	64401724	64404254	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073270.2	ENSG00000287985	26140	AC022202.1	ENSG00000276650	21369	None	None
PRIMA4_7q11.21a	HERV	PRIMA4	internal	chr7	64480396	64481688	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPCP7	ENSG00000228653	19137	ZNF680P1	ENSG00000228014	9743	None	None
MER41_7q11.21i	HERV	MER41	oneside	chr7	64484420	64488772	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF680P1	ENSG00000228014	13767	HNRNPCP7	ENSG00000228653	12053	None	None
PRIMA4_7q11.21b	HERV	PRIMA4	oneside	chr7	64488773	64492642	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPCP7	ENSG00000228653	8183	ZNF680P1	ENSG00000228014	18120	None	None
LTR25_7q11.21	HERV	LTR25	oneside	chr7	64508618	64516308	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPCP7	ENSG00000228653	6889	ZNF680	ENSG00000173041	3570	None	None
HUERSP3_7q11.21a	HERV	HUERSP3	prototype	chr7	64618066	64626253	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016769.5	ENSG00000286456	3232	AC016769.6	ENSG00000287317	25402	None	None
HERVH_7q11.21	HERV	HERVH	oneside	chr7	64679550	64686902	+	noncoding	ZNF107,BNIP3P11	protein_coding,processed_pseudogene	SENSE,ANTISENSE	ENSG00000196247,ENSG00000271550	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr7:64681677-64681696,chr7:64682669-64682688,chr7:64686268-64686291
PABLA_7q11.21a	HERV	PABLA	oneside	chr7	64745847	64750487	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073349.3	ENSG00000277206	17669	AC091799.1	ENSG00000224172	9104	None	None
PABLA_7q11.21b	HERV	PABLA	oneside	chr7	64750700	64753220	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073349.3	ENSG00000277206	14936	AC091799.1	ENSG00000224172	13957	None	None
HERV9_7q11.21	HERV	HERV9	oneside	chr7	64757090	64759565	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073349.3	ENSG00000277206	8591	AC091799.1	ENSG00000224172	20347	None	None
HERVFC1_7q11.21	HERV	HERVFC1	prototype	chr7	64834895	64840158	-	noncoding	AC073349.2	processed_pseudogene	SENSE	ENSG00000234338	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr7:64839936-64840331	chr7:64839936-64839941
HML3_7q11.21	HERV	HML3	oneside	chr7	64948007	64950796	+	noncoding	AC073210.3	lncRNA	SENSE	ENSG00000286342	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_7q11.21b	HERV	HUERSP3	internal	chr7	64951152	64953114	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF117	ENSG00000152926	18658	AC073210.3	ENSG00000286342	451	None	None
HERV3_7q11.21	HERV	HERV3	prototype	chr7	64990324	64999936	-	noncoding	ZNF117,ERV3-1	protein_coding,protein_coding	SENSE,SENSE	ENSG00000152926,ENSG00000213462	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	chr7:64999435-64999449
PABLB_7q11.21	HERV	PABLB	prototype	chr7	65302904	65311859	+	noncoding	AC104073.4	lncRNA	SENSE	ENSG00000282381	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_7q11.21c	HERV	HUERSP3	internal	chr7	65403922	65406831	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF92	ENSG00000146757	2787	AC114501.3	ENSG00000238124	56240	None	None
HERVFH21_7q11.21	HERV	HERVFH21	oneside	chr7	65475783	65479612	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114501.3	ENSG00000238124	12345	AC114501.1	ENSG00000226767	29161	None	chr7:65476074-65476095,chr7:65476199-65476205
HML2_7q11.21	HERV	HML2	oneside	chr7	66004684	66007803	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC068533.2	ENSG00000229886	17323	AC073261.1	ENSG00000224365	547	None	None
ERVLE_7q11.21	HERV	ERVLE	oneside	chr7	66304013	66309489	-	noncoding	TPST1	protein_coding	ANTISENSE	ENSG00000169902	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_7q11.21b	HERV	HERVL	unknown	chr7	66906390	66912591	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073335.1	ENSG00000179131	1990	LINC02604	ENSG00000273142	93	None	None
MER101_7q11.21c	HERV	MER101	internal	chr7	67060390	67062485	-	noncoding	TYW1	protein_coding	ANTISENSE	ENSG00000198874	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7q11.22a	HERV	ERVLE	internal	chr7	67840051	67841073	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092648.1	ENSG00000223948	69583	AC092637.1	ENSG00000225209	179162	None	None
ERVLE_7q11.22b	HERV	ERVLE	internal	chr7	67905520	67911422	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092648.1	ENSG00000223948	135052	AC092637.1	ENSG00000225209	108813	None	None
ERVLE_7q11.22c	HERV	ERVLE	internal	chr7	67911947	67913091	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092648.1	ENSG00000223948	141479	AC092637.1	ENSG00000225209	107144	None	None
ERVLE_7q11.22d	HERV	ERVLE	internal	chr7	68123234	68124495	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006013.1	ENSG00000236531	4025	AC093655.1	ENSG00000226829	25053	None	None
ERVLB4_7q11.22a	HERV	ERVLB4	oneside	chr7	68271503	68275258	+	noncoding	AC093655.1	lncRNA	ANTISENSE	ENSG00000226829	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7q11.22	HERV	ERV316A3	oneside	chr7	68341498	68343492	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004910.1	ENSG00000228429	297306	AC093655.1	ENSG00000226829	21822	None	None
ERVLB4_7q11.22b	HERV	ERVLB4	internal	chr7	68425837	68427015	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093655.1	ENSG00000226829	106161	AC004910.1	ENSG00000228429	213783	None	None
ERVLE_7q11.22e	HERV	ERVLE	internal	chr7	68556590	68559051	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004910.1	ENSG00000228429	81747	AC093655.1	ENSG00000226829	236914	None	None
ERVLE_7q11.22f	HERV	ERVLE	internal	chr7	68559069	68560375	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004910.1	ENSG00000228429	80423	AC093655.1	ENSG00000226829	239393	None	None
HERVIP10F_7q11.22	HERV	HERVIP10F	oneside	chr7	70846133	70850127	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073873.1	ENSG00000236978	8120	GALNT17	ENSG00000185274	282017	None	chr7:70850001-70850008
ERVLE_7q11.22g	HERV	ERVLE	internal	chr7	72093392	72094808	+	noncoding	CALN1	protein_coding	ANTISENSE	ENSG00000183166	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_7q11.23	HERV	MER101	internal	chr7	72761634	72766317	+	coding	TYW1B	protein_coding	ANTISENSE	ENSG00000277149	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_7q11.23	HERV	MER41	oneside	chr7	73787406	73791637	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CLDN3	ENSG00000165215	17136	CLDN4	ENSG00000189143	7905	None	None
MER34B_7q11.23a	HERV	MER34B	internal	chr7	73799725	73802181	+	noncoding	CLDN4	protein_coding	SENSE	ENSG00000189143	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_7q11.23b	HERV	HERVH	tandem*	chr7	75778912	75788562	+	noncoding	CCL26	protein_coding	ANTISENSE	ENSG00000006606	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_7q11.23b	HERV	MER34B	internal	chr7	76448833	76451767	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DTX2	ENSG00000091073	9909	ZP3	ENSG00000188372	6762	None	None
MER34B_7q11.23c	HERV	MER34B	internal	chr7	76452293	76453035	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DTX2	ENSG00000091073	8641	ZP3	ENSG00000188372	10222	None	None
MER34B_7q11.23d	HERV	MER34B	internal	chr7	76602528	76604185	+	noncoding	AC004980.1	transcribed_unprocessed_pseudogene	SENSE	ENSG00000205485	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR23_7q11.23a	HERV	LTR23	internal	chr7	76623872	76624265	+	noncoding	AC004980.1,POMZP3	transcribed_unprocessed_pseudogene,protein_coding	SENSE,ANTISENSE	ENSG00000205485,ENSG00000146707	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7q11.23	HERV	ERVLE	internal	chr7	76876829	76877548	-	noncoding	AC006972.1	lncRNA	SENSE	ENSG00000285666	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_7q11.23e	HERV	MER34B	internal	chr7	76946910	76949060	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DTX2P1-UPK3BP1-PMS2P11	ENSG00000265479	10775	AC007003.1	ENSG00000231183	27719	None	None
LTR23_7q11.23b	HERV	LTR23	internal	chr7	76950377	76951117	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DTX2P1-UPK3BP1-PMS2P11	ENSG00000265479	8718	AC007003.1	ENSG00000231183	31186	None	None
HERVH_7q11.23a	HERV	HERVH	prototype	chr7	77339937	77345880	+	noncoding	GSAP	protein_coding	ANTISENSE	ENSG00000186088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_7q11.23	HERV	HERVL	prototype	chr7	77870269	77874796	-	noncoding	PHTF2	protein_coding	ANTISENSE	ENSG00000006576	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_7q21.11	HERV	MER61	internal	chr7	78009135	78011685	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004990.1	ENSG00000232756	13964	MAGI2	ENSG00000187391	5370	None	None
HERVL_7q21.11a	HERV	HERVL	oneside	chr7	78608844	78610281	-	noncoding	MAGI2	protein_coding	SENSE	ENSG00000187391	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_7q21.11a	HERV	MER4B	oneside	chr7	79156061	79158978	+	noncoding	MAGI2,AC006355.2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000187391,ENSG00000281120	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:79157555-79157873	None
MER4B_7q21.11b	HERV	MER4B	internal	chr7	79159023	79163015	+	noncoding	MAGI2,AC006355.2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000187391,ENSG00000281120	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7q21.11a	HERV	ERVLB4	internal	chr7	79476360	79479247	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAGI2-AS3	ENSG00000234456	5152	NUP35P2	ENSG00000226285	64664	None	None
ERVLB4_7q21.11b	HERV	ERVLB4	internal	chr7	79531098	79532635	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NUP35P2	ENSG00000226285	11276	MAGI2-AS3	ENSG00000234456	59890	None	None
ERV316A3_7q21.11a	HERV	ERV316A3	oneside	chr7	79652420	79654628	+	noncoding	RNA5SP234	rRNA_pseudogene	SENSE	ENSG00000200786	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7q21.11b	HERV	ERV316A3	prototype	chr7	80244753	80250006	-	noncoding	RN7SL869P,AC003988.1	misc_RNA,lncRNA	ANTISENSE,SENSE	ENSG00000244392,ENSG00000234223	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7q21.11c	HERV	ERV316A3	oneside	chr7	80269139	80270341	-	noncoding	AC003988.1	lncRNA	SENSE	ENSG00000234223	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7q21.11c	HERV	ERVLB4	internal	chr7	80331030	80334423	+	noncoding	AC004862.1	lncRNA	ANTISENSE	ENSG00000232667	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_7q21.11b	HERV	HERVL	oneside	chr7	80351961	80352857	-	noncoding	AC004862.1	lncRNA	SENSE	ENSG00000232667	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7q21.11d	HERV	ERV316A3	prototype	chr7	80519439	80526809	-	noncoding	CD36	protein_coding	ANTISENSE	ENSG00000135218	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr7:80524846-80524857
ERVLB4_7q21.11d	HERV	ERVLB4	internal	chr7	80566619	80567650	-	noncoding	CD36	protein_coding	ANTISENSE	ENSG00000135218	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7q21.11e	HERV	ERV316A3	internal	chr7	81188548	81191353	+	noncoding	AC005008.2	lncRNA	SENSE	ENSG00000237896	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL18_7q21.11a	HERV	HERVL18	prototype	chr7	81264073	81267799	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004866.1	ENSG00000223514	67307	AC005008.2	ENSG00000237896	64958	None	None
HERVL_7q21.11c	HERV	HERVL	oneside	chr7	81276094	81280891	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005008.2	ENSG00000237896	76979	AC004866.1	ENSG00000223514	54215	None	None
HERVL40_7q21.11	HERV	HERVL40	oneside	chr7	81467958	81472638	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EIF4EP4	ENSG00000232968	4345	AC008163.1	ENSG00000233491	16566	None	None
ERVLE_7q21.11a	HERV	ERVLE	internal	chr7	81870412	81871054	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HGF	ENSG00000019991	99974	CACNA2D1	ENSG00000153956	75390	None	None
ERVLE_7q21.11b	HERV	ERVLE	internal	chr7	81931797	81932347	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CACNA2D1	ENSG00000153956	14097	HGF	ENSG00000019991	161359	None	None
ERV316A3_7q21.11f	HERV	ERV316A3	oneside	chr7	82056197	82058328	+	noncoding	CACNA2D1	protein_coding	ANTISENSE	ENSG00000153956	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_7q21.11b	HERV	HERVL18	prototype	chr7	82201985	82205211	+	noncoding	CACNA2D1	protein_coding	ANTISENSE	ENSG00000153956	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_7q21.11	HERV	HERV9	prototype	chr7	82636877	82646011	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTHFD2P5	ENSG00000213530	46186	AC004006.1	ENSG00000228711	11024	None	None
ERVL_7q21.11	HERV	ERVL	oneside	chr7	82733620	82739704	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004006.1	ENSG00000228711	76209	PCLO	ENSG00000186472	14308	None	None
ERV316A3_7q21.11g	HERV	ERV316A3	internal	chr7	82743879	82748076	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004006.1	ENSG00000228711	86468	PCLO	ENSG00000186472	5936	None	None
ERVLE_7q21.11c	HERV	ERVLE	internal	chr7	83324510	83326010	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079799.1	ENSG00000235503	29144	PCLO	ENSG00000186472	161580	None	None
HERVH_7q21.11	HERV	HERVH	prototype	chr7	83459668	83465383	+	noncoding	SEMA3E	protein_coding	ANTISENSE	ENSG00000170381	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr7:83463142-83463287	chr7:83460739-83460750
ERV316A3_7q21.11h	HERV	ERV316A3	prototype	chr7	83872564	83875793	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAD23BP2	ENSG00000230244	207939	SEMA3A	ENSG00000075213	79984	None	None
ERVLB4_7q21.11e	HERV	ERVLB4	internal	chr7	83927102	83928090	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAD23BP2	ENSG00000230244	262477	SEMA3A	ENSG00000075213	27687	None	None
HERVL74_7q21.11a	HERV	HERVL74	oneside	chr7	84584415	84588988	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093716.1	ENSG00000235243	258889	AC003984.1	ENSG00000235139	93	None	None
HERVL74_7q21.11b	HERV	HERVL74	internal	chr7	84598260	84601013	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093716.1	ENSG00000235243	246864	AC003984.1	ENSG00000235139	13938	None	None
HERVL74_7q21.11c	HERV	HERVL74	oneside	chr7	84859853	84866058	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN2P11	ENSG00000232605	10496	AC093716.1	ENSG00000235243	11600	None	None
ERVLE_7q21.11d	HERV	ERVLE	internal	chr7	84929007	84930395	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074183.2	ENSG00000280325	8940	HMGN2P11	ENSG00000232605	52051	None	None
PABLA_7q21.11	HERV	PABLA	internal	chr7	84941866	84945330	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074183.2	ENSG00000280325	1610	HNRNPA1P8	ENSG00000229251	38226	None	None
MER34B_7q21.11	HERV	MER34B	internal	chr7	84968658	84969364	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074183.2	ENSG00000280325	28402	HNRNPA1P8	ENSG00000229251	14192	None	None
ERVLE_7q21.11e	HERV	ERVLE	internal	chr7	85370452	85372047	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DYNLL1P7	ENSG00000230614	9071	SEMA3D	ENSG00000153993	183597	None	None
HERVIP10F_7q21.11	HERV	HERVIP10F	prototype	chr7	85737576	85746387	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SOCS5P1	ENSG00000236610	470398	AC092013.1	ENSG00000227785	101232	None	None
HML5_7q21.11	HERV	HML5	oneside	chr7	85764547	85766213	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092013.1	ENSG00000227785	128203	SOCS5P1	ENSG00000236610	450572	None	None
ERV316A3_7q21.11i	HERV	ERV316A3	oneside	chr7	85903379	85906751	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SOCS5P1	ENSG00000236610	310034	AC092013.1	ENSG00000227785	267035	None	None
HERVL_7q21.11d	HERV	HERVL	prototype	chr7	86087739	86094294	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092013.1	ENSG00000227785	451395	SOCS5P1	ENSG00000236610	122491	None	None
ERV316A3_7q21.11j	HERV	ERV316A3	internal	chr7	86385103	86386320	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SOCS5P1	ENSG00000236610	167370	GRM3	ENSG00000198822	257594	None	None
ERV316A3_7q21.11k	HERV	ERV316A3	internal	chr7	86411908	86416011	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SOCS5P1	ENSG00000236610	194175	GRM3	ENSG00000198822	227903	chr7:86414798-86415019	None
HERVL40_7q21.12a	HERV	HERVL40	prototype	chr7	86845190	86847283	-	noncoding	GRM3	protein_coding	ANTISENSE	ENSG00000198822	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_7q21.12b	HERV	HERVL40	internal	chr7	86884223	86888948	+	noncoding	KIAA1324L	protein_coding	ANTISENSE	ENSG00000164659	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7q21.12a	HERV	ERVLE	internal	chr7	87070520	87072263	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004023.1	ENSG00000261462	37276	KIAA1324L	ENSG00000164659	10866	None	None
ERVLE_7q21.12b	HERV	ERVLE	internal	chr7	87090172	87091617	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004023.1	ENSG00000261462	17922	KIAA1324L	ENSG00000164659	30518	None	None
ERV316A3_7q21.12a	HERV	ERV316A3	oneside	chr7	87125631	87127325	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004023.1	ENSG00000261462	14349	AC005076.2	ENSG00000224046	24097	None	None
HERVL_7q21.12a	HERV	HERVL	prototype	chr7	87278267	87284832	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM243	ENSG00000135185	57680	TP53TG1	ENSG00000182165	38111	None	None
MER61_7q21.12	HERV	MER61	internal	chr7	87323384	87327754	-	noncoding	TP53TG1	lncRNA	SENSE	ENSG00000182165	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
LTR25_7q21.12	HERV	LTR25	internal	chr7	87327757	87330748	-	noncoding	TP53TG1	lncRNA	SENSE	ENSG00000182165	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_7q21.12	HERV	PRIMA41	oneside	chr7	87349244	87351840	-	noncoding	CROT	protein_coding	ANTISENSE	ENSG00000005469	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_7q21.12	HERV	MER4	internal	chr7	87354026	87355522	-	noncoding	CROT	protein_coding	ANTISENSE	ENSG00000005469	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7q21.12b	HERV	ERV316A3	oneside	chr7	87910895	87915022	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADAM22	ENSG00000008277	19121	DBF4	ENSG00000006634	1342	None	None
HUERSP1_7q21.12	HERV	HUERSP1	prototype	chr7	88285913	88288074	-	noncoding	AC003991.1,STEAP4	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000228113,ENSG00000127954	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_7q21.12b	HERV	HERVL	oneside	chr7	88380615	88386108	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STEAP4	ENSG00000127954	73724	AC002069.2	ENSG00000233420	34059	None	None
ERVLE_7q21.12c	HERV	ERVLE	internal	chr7	88460495	88461397	+	noncoding	AC002069.2	lncRNA	SENSE	ENSG00000233420	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_7q21.13a	HERV	HUERSP3	oneside	chr7	88539947	88542464	-	noncoding	AC002069.2	lncRNA	ANTISENSE	ENSG00000233420	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_7q21.13b	HERV	HUERSP3	oneside	chr7	88542536	88548265	-	noncoding	AC002069.2	lncRNA	ANTISENSE	ENSG00000233420	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_7q21.13a	HERV	ERVL	internal	chr7	88656834	88657723	+	noncoding	AC002069.2	lncRNA	SENSE	ENSG00000233420	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR46_7q21.13	HERV	LTR46	oneside	chr7	89433216	89439173	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF804B	ENSG00000182348	94688	AC002383.1	ENSG00000227863	4773	None	None
HERVL18_7q21.13	HERV	HERVL18	oneside	chr7	89437483	89438582	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF804B	ENSG00000182348	98955	AC002383.1	ENSG00000227863	5364	None	None
ERVL_7q21.13b	HERV	ERVL	internal	chr7	89476125	89477721	+	noncoding	AC002383.1	lncRNA	SENSE	ENSG00000227863	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_7q21.13	HERV	HERVIP10FH	oneside	chr7	89624155	89629987	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC002383.1	ENSG00000227863	127237	RNU6-274P	ENSG00000239075	124633	None	None
ERVLE_7q21.13a	HERV	ERVLE	internal	chr7	89639059	89639757	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-274P	ENSG00000239075	114863	AC002383.1	ENSG00000227863	142141	None	None
ERVLB4_7q21.13a	HERV	ERVLB4	oneside	chr7	89732877	89735280	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-274P	ENSG00000239075	19340	AC002383.1	ENSG00000227863	235959	None	None
HUERSP3B_7q21.13	HERV	HUERSP3B	prototype	chr7	89856022	89864008	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-274P	ENSG00000239075	101296	STEAP2-AS1	ENSG00000227646	18345	None	None
ERVLE_7q21.13b	HERV	ERVLE	oneside	chr7	89945805	89949866	-	noncoding	STEAP2-AS1	lncRNA	SENSE	ENSG00000227646	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7q21.13b	HERV	ERVLB4	oneside	chr7	89959647	89961245	-	noncoding	STEAP2-AS1	lncRNA	SENSE	ENSG00000227646	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7q21.13c	HERV	ERVLB4	oneside	chr7	89961308	89964030	-	noncoding	STEAP2-AS1	lncRNA	SENSE	ENSG00000227646	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV4_7q21.13a	HERV	HERV4	internal	chr7	90191594	90192484	-	noncoding	STEAP2-AS1,STEAP2	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000227646,ENSG00000157214	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV4_7q21.13b	HERV	HERV4	oneside	chr7	90192907	90195776	-	noncoding	STEAP2-AS1,STEAP2	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000227646,ENSG00000157214	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:90195623-90195918	chr7:90195728-90195733
PABLA_7q21.13	HERV	PABLA	internal	chr7	90291595	90294907	-	noncoding	CFAP69	protein_coding	ANTISENSE	ENSG00000105792	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_7q21.13	HERV	MER41	oneside	chr7	90294883	90296158	-	noncoding	CFAP69	protein_coding	ANTISENSE	ENSG00000105792	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7q21.13	HERV	ERV316A3	prototype	chr7	90462841	90467565	-	noncoding	CLDN12,AC006153.1,CDK14	protein_coding,lncRNA,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000157224,ENSG00000273299,ENSG00000058091	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr7:90463112-90463121
ERVLB4_7q21.13d	HERV	ERVLB4	internal	chr7	91414182	91415378	+	noncoding	AC079760.2,AC079760.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000243144,ENSG00000235450	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_7q21.13	HERV	HERV9	oneside	chr7	91447505	91456909	-	noncoding	AC079760.2,AC079760.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000243144,ENSG00000235450	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_7q21.2	HERV	HERVL40	oneside	chr7	92403115	92404941	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANKIB1	ENSG00000001629	1732	TMBIM7P	ENSG00000230927	7609	None	None
HERVW_7q21.2	HERV	HERVW	prototype	chr7	92467999	92478192	-	coding	AC007566.1,ERVW-1	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000244055,ENSG00000242950	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	chr7:92477466-92477500,chr7:92477942-92477951
HERVH_7q21.2	HERV	HERVH	prototype	chr7	92479193	92485274	-	coding	AC007566.1	lncRNA	ANTISENSE	ENSG00000244055	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7q21.2	HERV	ERVLE	internal	chr7	92485345	92486581	+	noncoding	AC007566.1	lncRNA	SENSE	ENSG00000244055	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_7q21.2	HERV	MER4	oneside	chr7	93127516	93129355	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SAMD9	ENSG00000205413	9493	SAMD9L	ENSG00000177409	701	None	None
PRIMA41_7q21.2	HERV	PRIMA41	oneside	chr7	93148971	93154061	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SAMD9L	ENSG00000177409	586	HEPACAM2	ENSG00000188175	34473	None	None
HERVH_7q21.3a	HERV	HERVH	oneside	chr7	93395064	93399625	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VPS50	ENSG00000004766	33941	CALCR	ENSG00000004948	24862	None	None
HERVH_7q21.3b	HERV	HERVH	prototype	chr7	93639935	93645552	+	noncoding	GNGT1	protein_coding	SENSE	ENSG00000127928	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr7:93640284-93640290
ERVLE_7q21.3a	HERV	ERVLE	internal	chr7	93760478	93763816	-	noncoding	GNGT1	protein_coding	ANTISENSE	ENSG00000127928	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_7q21.3a	HERV	HERVL74	internal	chr7	93812320	93813026	+	noncoding	GNGT1	protein_coding	SENSE	ENSG00000127928	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7q21.3a	HERV	ERV316A3	oneside	chr7	94073652	94077152	+	noncoding	AC003092.2	lncRNA	ANTISENSE	ENSG00000236938	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7q21.3b	HERV	ERV316A3	oneside	chr7	94563686	94566141	-	noncoding	SGCE	protein_coding	SENSE	ENSG00000127990	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7q21.3a	HERV	ERVLB4	internal	chr7	94583560	94585015	+	noncoding	SGCE	protein_coding	ANTISENSE	ENSG00000127990	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HML3_7q21.3	HERV	HML3	prototype	chr7	94722293	94729309	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATP5PBP2	ENSG00000214342	9343	RNU6-956P	ENSG00000239030	9782	None	None
HERVIP10FH_7q21.3	HERV	HERVIP10FH	prototype	chr7	94877725	94883095	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARF1P1	ENSG00000219807	43278	PPP1R9A	ENSG00000158528	24107	None	None
HERVL40_7q21.3	HERV	HERVL40	oneside	chr7	95211179	95213283	+	noncoding	PPP1R9A,AC002429.2	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000158528,ENSG00000236197	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_7q21.3	HERV	HERVFRD	prototype	chr7	95341885	95352696	+	noncoding	AC004022.2,AC004022.1	processed_pseudogene,processed_pseudogene	ANTISENSE,SENSE	ENSG00000237160,ENSG00000228751	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7q21.3c	HERV	ERV316A3	oneside	chr7	96100026	96103376	+	noncoding	DYNC1I1	protein_coding	SENSE	ENSG00000158560	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_7q21.3	HERV	HERVL	oneside	chr7	96454544	96457944	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-188P	ENSG00000252872	76624	SEM1	ENSG00000127922	23682	None	None
ERVLE_7q21.3b	HERV	ERVLE	internal	chr7	97205384	97206974	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP1S2P1	ENSG00000226046	230544	AC073900.1	ENSG00000224475	3901	None	None
ERVLE_7q21.3c	HERV	ERVLE	internal	chr7	97217956	97218806	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP1S2P1	ENSG00000226046	218712	AC073900.1	ENSG00000224475	16473	None	None
HERVL74_7q21.3b	HERV	HERVL74	internal	chr7	97273012	97275172	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP1S2P1	ENSG00000226046	162346	AC073900.1	ENSG00000224475	71529	None	None
ERVLE_7q21.3d	HERV	ERVLE	oneside	chr7	97659406	97661846	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TAC1	ENSG00000006128	70238	RN7SKP104	ENSG00000199475	60146	None	None
ERVLB4_7q21.3b	HERV	ERVLB4	internal	chr7	97930076	97930678	+	noncoding	AC079781.5	lncRNA	ANTISENSE	ENSG00000284707	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_7q21.3	HERV	HERVE	internal	chr7	97951319	97955393	-	noncoding	AC079781.5	lncRNA	SENSE	ENSG00000284707	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7q22.1a	HERV	ERVLB4	internal	chr7	99553455	99556265	-	noncoding	FAM200A	protein_coding	SENSE	ENSG00000221909	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_7q22.1a	HERV	HERVH	prototype	chr7	99723151	99729932	+	noncoding	CYP3A7,CYP3A7-CYP3A51P	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000160870,ENSG00000282301	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr7:99723467-99723472
HERVP71A_7q22.1	HERV	HERVP71A	oneside	chr7	99807352	99809199	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYP3A137P	ENSG00000261511	10819	CYP3A4	ENSG00000160868	23104	None	None
ERVLE_7q22.1a	HERV	ERVLE	internal	chr7	99878620	99879430	+	noncoding	TRIM4	protein_coding	ANTISENSE	ENSG00000146833	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL32_7q22.1	HERV	HERVL32	prototype	chr7	99896194	99899513	+	noncoding	TRIM4	protein_coding	ANTISENSE	ENSG00000146833	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML4_7q22.1	HERV	HML4	oneside	chr7	99977146	99979562	+	noncoding	AC004522.5	lncRNA	SENSE	ENSG00000286921	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_7q22.1	HERV	HARLEQUIN	prototype	chr7	100838700	100847185	+	noncoding	SLC12A9,SLC12A9-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000146828,ENSG00000236305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_7q22.1b	HERV	HERVH	prototype	chr7	100922282	100928020	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL549P	ENSG00000239825	15710	RPS29P15	ENSG00000235926	350	None	None
ERVLE_7q22.1b	HERV	ERVLE	internal	chr7	101580742	101583339	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01007	ENSG00000233123	11736	MYL10	ENSG00000106436	29991	None	None
ERVLE_7q22.1c	HERV	ERVLE	internal	chr7	102386901	102387342	-	noncoding	PRKRIP1	protein_coding	ANTISENSE	ENSG00000128563	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH48_7q22.1	HERV	HERVH48	prototype	chr7	102973210	102978728	+	coding	FBXL13,NFE4	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000161040,ENSG00000230257	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr7:102974130-102974433,chr7:102975970-102976348	chr7:102973409-102973455,chr7:102973483-102973497,chr7:102973550-102973569,chr7:102974578-102974582,chr7:102973246-102973270,chr7:102973315-102973325,chr7:102973523-102973540
ERVLB4_7q22.1b	HERV	ERVLB4	oneside	chr7	102982042	102984570	-	noncoding	FBXL13,NFE4	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000161040,ENSG00000230257	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_7q22.1	HERV	HERVIP10FH	internal	chr7	103153306	103156543	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL23AP95	ENSG00000236848	981	AC007683.2	ENSG00000279482	5404	None	None
MER101_7q22.1a	HERV	MER101	internal	chr7	104178911	104181503	+	noncoding	ORC5	protein_coding	ANTISENSE	ENSG00000164815	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_7q22.1b	HERV	MER101	oneside	chr7	104181814	104183882	+	noncoding	ORC5	protein_coding	ANTISENSE	ENSG00000164815	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7q22.2a	HERV	ERV316A3	oneside	chr7	104251680	104253317	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ORC5	ENSG00000164815	43633	LHFPL3	ENSG00000187416	75383	None	None
ERV316A3_7q22.2b	HERV	ERV316A3	oneside	chr7	104300067	104300827	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LHFPL3	ENSG00000187416	27873	ORC5	ENSG00000164815	92020	None	None
HERVL_7q22.2	HERV	HERVL	internal	chr7	104687991	104691770	+	noncoding	LHFPL3	protein_coding	SENSE	ENSG00000187416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_7q22.2	HERV	HML2	internal	chr7	104748902	104752819	-	noncoding	LHFPL3,LHFPL3-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000187416,ENSG00000226869	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_7q22.3	HERV	MER4	internal	chr7	106451448	106455433	-	noncoding	AC004917.1,AC005050.3	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000243797,ENSG00000286076	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_7q22.3a	HERV	MER41	prototype	chr7	106455435	106461177	-	noncoding	AC004917.1,AC005050.3	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000243797,ENSG00000286076	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr7:106460712-106460751
ERV316A3_7q22.3	HERV	ERV316A3	oneside	chr7	106475939	106477621	+	noncoding	AC004917.1,AC005050.3	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000243797,ENSG00000286076	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_7q22.3a	HERV	HERVH	prototype	chr7	106527752	106533658	-	noncoding	AC004917.1	lncRNA	SENSE	ENSG00000243797	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7q22.3	HERV	ERVLE	internal	chr7	106548063	106548761	-	noncoding	AC004917.1	lncRNA	SENSE	ENSG00000243797	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_7q22.3b	HERV	MER41	prototype	chr7	106796527	106801816	-	noncoding	LINC02577	lncRNA	ANTISENSE	ENSG00000228742	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7q22.3	HERV	ERVLB4	insert*	chr7	106815882	106826270	+	noncoding	LINC02577	lncRNA	SENSE	ENSG00000228742	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_7q22.3b	HERV	HERVH	prototype	chr7	106829635	106838519	+	noncoding	LINC02577	lncRNA	SENSE	ENSG00000228742	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr7:106830034-106830046
PABLB_7q22.3	HERV	PABLB	internal	chr7	107104335	107104870	-	noncoding	PRKAR2B,AC006387.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000005249,ENSG00000243193	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_7q22.3	HERV	MER61	oneside	chr7	107381038	107384641	+	noncoding	COG5	protein_coding	ANTISENSE	ENSG00000164597	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_7q22.3	HERV	HML5	prototype	chr7	107386034	107391346	+	noncoding	COG5	protein_coding	ANTISENSE	ENSG00000164597	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:107386066-107386420	None
HERVL40_7q22.3	HERV	HERVL40	oneside	chr7	107462730	107465091	-	noncoding	COG5	protein_coding	SENSE	ENSG00000164597	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_7q22.3	HERV	HERVL	prototype	chr7	107732303	107739462	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC26A4	ENSG00000091137	14494	AC002467.1	ENSG00000241764	537	None	None
HERVW_7q31.1a	HERV	HERVW	prototype	chr7	108337281	108344490	+	noncoding	NRCAM	protein_coding	ANTISENSE	ENSG00000091129	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_7q31.1a	HERV	HERVL	oneside	chr7	108538301	108540367	+	noncoding	PNPLA8	protein_coding	ANTISENSE	ENSG00000135241	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_7q31.1	HERV	HUERSP1	oneside	chr7	108624551	108628275	-	noncoding	AC005487.1	lncRNA	ANTISENSE	ENSG00000225647	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_7q31.1b	HERV	HERVL	prototype	chr7	108669274	108676787	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005487.1	ENSG00000225647	29925	AC002487.1	ENSG00000270425	43821	None	None
HUERSP2_7q31.1	HERV	HUERSP2	prototype	chr7	108873882	108878484	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC002487.1	ENSG00000270425	152281	C7orf66	ENSG00000205174	5491	None	None
ERV316A3_7q31.1a	HERV	ERV316A3	oneside	chr7	109027824	109029145	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC002386.1	ENSG00000230941	293175	BUB3P1	ENSG00000227968	32795	None	None
ERV316A3_7q31.1b	HERV	ERV316A3	internal	chr7	109145877	109148264	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BUB3P1	ENSG00000227968	150848	AC002386.1	ENSG00000230941	174056	None	None
ERVLE_7q31.1a	HERV	ERVLE	internal	chr7	109263019	109264379	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC002386.1	ENSG00000230941	57941	BUB3P1	ENSG00000227968	267990	None	None
HERVH_7q31.1a	HERV	HERVH	prototype	chr7	109591834	109597679	-	noncoding	AC073071.1	lncRNA	SENSE	ENSG00000234273	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_7q31.1b	HERV	HERVH	prototype	chr7	109641708	109647640	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073387.1	ENSG00000230192	12454	AC073071.1	ENSG00000234273	44542	chr7:109642529-109642665,chr7:109646200-109646350	chr7:109647260-109647274
ERVLB4_7q31.1a	HERV	ERVLB4	prototype	chr7	109742617	109748590	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073387.2	ENSG00000271368	14984	AC073387.1	ENSG00000230192	81815	None	None
HERVL_7q31.1c	HERV	HERVL	oneside	chr7	109790145	109794981	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EIF3IP1	ENSG00000237064	164237	AC073387.2	ENSG00000271368	25788	None	None
HERVL_7q31.1d	HERV	HERVL	oneside	chr7	109801141	109802951	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EIF3IP1	ENSG00000237064	156267	AC073387.2	ENSG00000271368	36784	None	None
ERV316A3_7q31.1c	HERV	ERV316A3	prototype	chr7	109956656	109963216	+	noncoding	EIF3IP1	processed_pseudogene	ANTISENSE	ENSG00000237064	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7q31.1b	HERV	ERVLB4	internal	chr7	110082325	110084634	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL3P8	ENSG00000232199	82701	AC073114.1	ENSG00000226965	23397	None	None
ERVLE_7q31.1b	HERV	ERVLE	internal	chr7	110211633	110215172	+	noncoding	AC073114.1	lncRNA	ANTISENSE	ENSG00000226965	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_7q31.1e	HERV	HERVL	oneside	chr7	110435845	110437557	+	noncoding	AC073114.1	lncRNA	ANTISENSE	ENSG00000226965	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7q31.1c	HERV	ERVLE	internal	chr7	110453546	110457414	+	noncoding	AC073114.1	lncRNA	ANTISENSE	ENSG00000226965	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7q31.1d	HERV	ERV316A3	internal	chr7	110528040	110529381	-	noncoding	AC073114.1	lncRNA	SENSE	ENSG00000226965	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_7q31.1f	HERV	HERVL	oneside	chr7	111064350	111065899	+	noncoding	IMMP2L	protein_coding	ANTISENSE	ENSG00000184903	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7q31.1c	HERV	ERVLB4	internal	chr7	111310664	111312842	-	noncoding	IMMP2L	protein_coding	SENSE	ENSG00000184903	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_7q31.1g	HERV	HERVL	prototype	chr7	111332877	111333960	+	noncoding	IMMP2L	protein_coding	ANTISENSE	ENSG00000184903	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_7q31.1	HERV	HUERSP3	oneside	chr7	111796380	111801499	+	noncoding	DOCK4	protein_coding	ANTISENSE	ENSG00000128512	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7q31.1e	HERV	ERV316A3	prototype	chr7	112364075	112370656	-	noncoding	AC004112.1	lncRNA	SENSE	ENSG00000226851	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL32_7q31.1	HERV	HERVL32	internal	chr7	112801732	112804105	-	noncoding	AC002463.1	lncRNA	ANTISENSE	ENSG00000223646	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_7q31.1c	HERV	HERVH	prototype	chr7	113234431	113239308	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073137.1	ENSG00000270997	176381	AC073346.1	ENSG00000225457	88101	None	None
HERVL40_7q31.1a	HERV	HERVL40	prototype	chr7	113319920	113322378	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073346.1	ENSG00000225457	173590	AC073137.1	ENSG00000270997	93311	None	None
MER4_7q31.1a	HERV	MER4	oneside	chr7	113617476	113623426	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPP1R3A	ENSG00000154415	253351	AC073348.2	ENSG00000287592	122606	None	None
MER4_7q31.1b	HERV	MER4	oneside	chr7	113623476	113625354	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPP1R3A	ENSG00000154415	251423	AC073348.2	ENSG00000287592	128606	None	None
ERV316A3_7q31.1f	HERV	ERV316A3	oneside	chr7	113672921	113676680	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073348.2	ENSG00000287592	178051	PPP1R3A	ENSG00000154415	200097	None	None
HERVL40_7q31.1b	HERV	HERVL40	prototype	chr7	113801998	113805371	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073348.2	ENSG00000287592	307128	PPP1R3A	ENSG00000154415	71406	None	None
HERVL40_7q31.1c	HERV	HERVL40	prototype	chr7	114306150	114312960	-	noncoding	FOXP2	protein_coding	ANTISENSE	ENSG00000128573	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_7q31.1b	HERV	HERVW	prototype	chr7	114379088	114386320	-	noncoding	FOXP2	protein_coding	ANTISENSE	ENSG00000128573	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr7:114386216-114386232
HERVL_7q31.1h	HERV	HERVL	oneside	chr7	114903490	114905954	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MDFIC	ENSG00000135272	16200	FOXP2	ENSG00000128573	209718	None	None
ERVLE_7q31.2a	HERV	ERVLE	internal	chr7	115097279	115097928	+	noncoding	LINC01393,LINC01392	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000225535,ENSG00000233607	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_7q31.2	HERV	HERVL40	internal	chr7	115131091	115133284	-	noncoding	LINC01392	lncRNA	SENSE	ENSG00000233607	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_7q31.2a	HERV	HERVL	oneside	chr7	115522750	115525751	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SNORA25B	ENSG00000202377	55564	AC073901.1	ENSG00000244565	18669	None	None
ERV316A3_7q31.2	HERV	ERV316A3	prototype	chr7	115613723	115619231	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092590.1	ENSG00000242072	28230	SNORA25B	ENSG00000202377	32281	None	None
ERVLE_7q31.2b	HERV	ERVLE	internal	chr7	115792026	115793197	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096551.1	ENSG00000199224	40076	AC093714.2	ENSG00000243345	977	None	None
ERVLE_7q31.2c	HERV	ERVLE	internal	chr7	115835051	115836479	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TFEC	ENSG00000105967	98669	AC096551.1	ENSG00000199224	1678	None	None
HERVH_7q31.2	HERV	HERVH	prototype	chr7	116455969	116461136	+	noncoding	AC002066.1,CAV2	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000237813,ENSG00000105971	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7q31.2d	HERV	ERVLE	internal	chr7	116649443	116650205	-	noncoding	LINC01510	lncRNA	SENSE	ENSG00000231210	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_7q31.2b	HERV	HERVL	internal	chr7	117101232	117101828	-	noncoding	ST7,ST7-AS2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000004866,ENSG00000226367	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL32_7q31.2	HERV	HERVL32	prototype	chr7	117401485	117406116	-	noncoding	CFTR,ASZ1	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000001626,ENSG00000154438	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7q31.31a	HERV	ERV316A3	prototype	chr7	117946424	117950048	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007568.1	ENSG00000224136	62749	AC003084.1	ENSG00000234826	48810	None	None
HML5_7q31.31	HERV	HML5	prototype	chr7	118114089	118121852	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC003084.1	ENSG00000234826	110044	LSM8	ENSG00000128534	62292	None	None
MER4_7q31.31a	HERV	MER4	oneside	chr7	118155889	118159374	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LSM8	ENSG00000128534	24770	AC003084.1	ENSG00000234826	151844	None	None
MER4_7q31.31b	HERV	MER4	oneside	chr7	118159795	118162287	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LSM8	ENSG00000128534	21857	AC003084.1	ENSG00000234826	155750	None	None
ERV316A3_7q31.31b	HERV	ERV316A3	oneside	chr7	118368793	118372859	-	noncoding	ANKRD7	protein_coding	ANTISENSE	ENSG00000106013	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7q31.31c	HERV	ERV316A3	internal	chr7	118462895	118463871	+	noncoding	ANKRD7	protein_coding	SENSE	ENSG00000106013	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7q31.31d	HERV	ERV316A3	internal	chr7	118697863	118700223	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GTF3AP6	ENSG00000229982	179880	AC002529.1	ENSG00000287827	184033	None	None
ERVLE_7q31.31a	HERV	ERVLE	internal	chr7	118701315	118704454	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC002529.1	ENSG00000287827	187485	GTF3AP6	ENSG00000229982	175649	None	None
HERVP71A_7q31.31	HERV	HERVP71A	oneside	chr7	118869214	118871689	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC002529.1	ENSG00000287827	355384	GTF3AP6	ENSG00000229982	8414	None	None
MER4_7q31.31c	HERV	MER4	oneside	chr7	119054496	119058521	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079791.1	ENSG00000270516	119656	AC092098.1	ENSG00000230520	103237	None	None
MER4_7q31.31d	HERV	MER4	oneside	chr7	119058696	119061415	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079791.1	ENSG00000270516	116762	AC092098.1	ENSG00000230520	107437	None	None
ERVLE_7q31.31b	HERV	ERVLE	internal	chr7	119180475	119181548	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02476	ENSG00000225546	313476	AC079791.1	ENSG00000270516	1326	None	None
HERVL_7q31.31	HERV	HERVL	prototype	chr7	119184157	119191167	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079791.1	ENSG00000270516	5008	LINC02476	ENSG00000225546	303857	None	chr7:119184331-119184367
ERVLB4_7q31.31a	HERV	ERVLB4	internal	chr7	119320943	119321665	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02476	ENSG00000225546	173359	AC079791.1	ENSG00000270516	141794	None	None
ERVLB4_7q31.31b	HERV	ERVLB4	internal	chr7	119364769	119365786	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02476	ENSG00000225546	129238	AC079791.1	ENSG00000270516	185620	None	None
HERVL40_7q31.31	HERV	HERVL40	oneside	chr7	119387930	119390657	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02476	ENSG00000225546	104367	AC079791.1	ENSG00000270516	208781	None	None
HERVW_7q31.31	HERV	HERVW	oneside	chr7	119566189	119570829	+	noncoding	LINC02476	lncRNA	ANTISENSE	ENSG00000225546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7q31.31c	HERV	ERVLB4	internal	chr7	119596561	119597181	+	noncoding	LINC02476	lncRNA	ANTISENSE	ENSG00000225546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_7q31.31a	HERV	HERVH	prototype	chr7	120009179	120014835	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-29P	ENSG00000271739	3078	AC004946.1	ENSG00000233417	126181	None	None
HERV3_7q31.31	HERV	HERV3	oneside	chr7	120052771	120061151	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004946.1	ENSG00000233417	79865	RNU1-29P	ENSG00000271739	46670	chr7:120052863-120053251	chr7:120052863-120052870
PABLA_7q31.31	HERV	PABLA	internal	chr7	120117365	120118544	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-29P	ENSG00000271739	111264	AC004946.1	ENSG00000233417	22472	None	None
ERVLE_7q31.31c	HERV	ERVLE	internal	chr7	120186197	120188433	+	noncoding	AC004946.1	lncRNA	ANTISENSE	ENSG00000233417	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7q31.31e	HERV	ERV316A3	oneside	chr7	120229043	120234206	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004946.1	ENSG00000233417	1830	KCND2	ENSG00000184408	38969	None	None
ERVLB4_7q31.31d	HERV	ERVLB4	internal	chr7	120765254	120768455	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004888.1	ENSG00000231295	12740	TSPAN12	ENSG00000106025	18865	None	None
HERVH_7q31.31b	HERV	HERVH	prototype	chr7	120776623	120782885	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TSPAN12	ENSG00000106025	4435	AC004888.1	ENSG00000231295	24109	chr7:120780028-120780340,chr7:120780632-120781012,chr7:120782582-120782939	chr7:120782590-120782593
HERVH_7q31.31c	HERV	HERVH	prototype	chr7	120885700	120891391	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ING3	ENSG00000071243	59372	TSPAN12	ENSG00000106025	27298	None	None
ERVLE_7q31.31d	HERV	ERVLE	internal	chr7	120934939	120938934	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ING3	ENSG00000071243	11829	TSPAN12	ENSG00000106025	76537	None	None
HERVH_7q31.31d	HERV	HERVH	prototype	chr7	121315380	121321293	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006364.1	ENSG00000287554	5538	WNT16	ENSG00000002745	4074	None	None
HERVH_7q31.32a	HERV	HERVH	prototype	chr7	121563649	121569668	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004875.1	ENSG00000227743	73666	AC074085.2	ENSG00000234985	122388	None	None
ERV316A3_7q31.32a	HERV	ERV316A3	oneside	chr7	121732404	121733291	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP277	ENSG00000252704	3152	AC004875.1	ENSG00000227743	46041	None	None
HERVW_7q31.32	HERV	HERVW	oneside	chr7	122171655	122177595	+	noncoding	AC015983.2	lncRNA	SENSE	ENSG00000234418	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_7q31.32	HERV	HERVL	prototype	chr7	122202306	122209105	-	noncoding	AC015983.2	lncRNA	ANTISENSE	ENSG00000234418	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7q31.32a	HERV	ERVLE	oneside	chr7	122211204	122212866	-	noncoding	AC015983.2	lncRNA	ANTISENSE	ENSG00000234418	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7q31.32b	HERV	ERVLE	oneside	chr7	122212888	122214885	+	noncoding	AC015983.2	lncRNA	SENSE	ENSG00000234418	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7q31.32c	HERV	ERVLE	internal	chr7	122287497	122291632	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	FEZF1	ENSG00000128610	9671	AC015983.1	ENSG00000213302	52594	None	None
HERVL18_7q31.32	HERV	HERVL18	prototype	chr7	122688404	122693122	-	noncoding	CADPS2	protein_coding	SENSE	ENSG00000081803	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_7q31.32b	HERV	HERVH	prototype	chr7	122816729	122822998	+	noncoding	CADPS2	protein_coding	ANTISENSE	ENSG00000081803	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7q31.32d	HERV	ERVLE	internal	chr7	122926119	122931682	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CADPS2	ENSG00000081803	39360	TAS2R16	ENSG00000128519	63022	None	None
ERVLE_7q31.32e	HERV	ERVLE	internal	chr7	122956597	122961560	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TAS2R16	ENSG00000128519	33144	CADPS2	ENSG00000081803	69838	None	chr7:122960086-122960088
ERV316A3_7q31.32b	HERV	ERV316A3	oneside	chr7	123008258	123011170	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TAS2R16	ENSG00000128519	12558	AC073311.1	ENSG00000226680	58079	None	None
ERV316A3_7q31.32c	HERV	ERV316A3	oneside	chr7	123031956	123036582	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TAS2R16	ENSG00000128519	36256	AC073311.1	ENSG00000226680	32667	None	None
ERVLE_7q31.32f	HERV	ERVLE	internal	chr7	123436464	123439051	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IQUB	ENSG00000164675	13142	LYPLA1P1	ENSG00000223595	205723	None	None
ERVLE_7q31.32g	HERV	ERVLE	internal	chr7	123440024	123442393	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IQUB	ENSG00000164675	9800	LYPLA1P1	ENSG00000223595	209283	chr7:123440126-123440496	None
MER4_7q31.32	HERV	MER4	oneside	chr7	123941175	123945394	-	noncoding	SPAM1	protein_coding	ANTISENSE	ENSG00000106304	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7q31.32	HERV	ERVLB4	internal	chr7	124019633	124023158	+	noncoding	AC004690.2	lncRNA	SENSE	ENSG00000241345	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr7:124021121-124021126
MER4B_7q31.33a	HERV	MER4B	internal	chr7	124436162	124437239	+	noncoding	AC006148.1	lncRNA	SENSE	ENSG00000242593	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7q31.33a	HERV	ERV316A3	internal	chr7	124437323	124437827	+	noncoding	AC006148.1	lncRNA	SENSE	ENSG00000242593	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_7q31.33a	HERV	HERVL	oneside	chr7	124614638	124620015	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006148.1	ENSG00000242593	125066	RNU6-102P	ENSG00000207214	27704	None	None
HERVL_7q31.33b	HERV	HERVL	oneside	chr7	124687445	124690163	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-102P	ENSG00000207214	39623	AC004925.1	ENSG00000279419	52149	None	None
HERVH_7q31.33a	HERV	HERVH	prototype	chr7	124729157	124734734	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-102P	ENSG00000207214	81335	AC004925.1	ENSG00000279419	7578	None	None
HERVH_7q31.33b	HERV	HERVH	oneside	chr7	124960669	124963952	-	noncoding	POT1-AS1	lncRNA	ANTISENSE	ENSG00000224897	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_7q31.33c	HERV	HERVH	oneside	chr7	125259795	125264637	-	noncoding	POT1-AS1,AC019155.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000224897,ENSG00000219445	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4B_7q31.33b	HERV	MER4B	internal	chr7	125578911	125579958	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POT1-AS1	ENSG00000224897	95945	AC003975.1	ENSG00000197462	337913	None	None
ERVLE_7q31.33a	HERV	ERVLE	internal	chr7	125638379	125640566	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POT1-AS1	ENSG00000224897	155413	AC003975.1	ENSG00000197462	277305	None	None
ERVLB4_7q31.33a	HERV	ERVLB4	oneside	chr7	125706466	125708625	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POT1-AS1	ENSG00000224897	223500	AC003975.1	ENSG00000197462	209246	None	None
ERVLB4_7q31.33b	HERV	ERVLB4	internal	chr7	125716839	125717389	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POT1-AS1	ENSG00000224897	233873	AC003975.1	ENSG00000197462	200482	None	None
ERV316A3_7q31.33b	HERV	ERV316A3	internal	chr7	125717870	125719088	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POT1-AS1	ENSG00000224897	234904	AC003975.1	ENSG00000197462	198783	None	None
ERVL_7q31.33	HERV	ERVL	oneside	chr7	125800924	125806593	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POT1-AS1	ENSG00000224897	317958	AC003975.1	ENSG00000197462	111278	None	None
HERVH_7q31.33d	HERV	HERVH	prototype	chr7	125909965	125915739	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POT1-AS1	ENSG00000224897	426999	AC003975.1	ENSG00000197462	2132	None	None
HERVH_7q31.33e	HERV	HERVH	prototype	chr7	125917557	125924110	+	noncoding	AC003975.1	lncRNA	SENSE	ENSG00000197462	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr7:125917860-125917866,chr7:125924006-125924008
HERVL_7q31.33c	HERV	HERVL	internal	chr7	125940888	125943076	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC000372.1	ENSG00000241921	435894	AC003975.1	ENSG00000197462	7056	None	None
ERVLE_7q31.33b	HERV	ERVLE	internal	chr7	126004493	126006441	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC000372.1	ENSG00000241921	372529	AC003975.1	ENSG00000197462	70661	None	None
ERV316A3_7q31.33c	HERV	ERV316A3	internal	chr7	126052179	126052730	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC003975.1	ENSG00000197462	118347	AC000372.1	ENSG00000241921	326240	None	None
HERVL_7q31.33d	HERV	HERVL	prototype	chr7	126649147	126652841	+	noncoding	GRM8	protein_coding	ANTISENSE	ENSG00000179603	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_7q31.33	HERV	MER61	prototype	chr7	126668002	126673337	+	coding	GRM8	protein_coding	ANTISENSE	ENSG00000179603	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_7q31.33e	HERV	HERVL	oneside	chr7	126981922	126983271	-	noncoding	GRM8	protein_coding	SENSE	ENSG00000179603	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_7q31.33f	HERV	HERVL	oneside	chr7	126983281	126984721	+	noncoding	GRM8	protein_coding	ANTISENSE	ENSG00000179603	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7q32.1	HERV	ERV316A3	internal	chr7	127541696	127544074	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC000124.1	ENSG00000226770	55892	GCC1	ENSG00000179562	36554	None	None
PABLA_7q32.1	HERV	PABLA	internal	chr7	128896054	128900883	+	coding	KCP	protein_coding	ANTISENSE	ENSG00000135253	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:128897146-128897229	None
HERVL_7q32.1	HERV	HERVL	oneside	chr7	129444201	129450234	-	coding	STRIP2	protein_coding	ANTISENSE	ENSG00000128578	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:129444424-129444723	chr7:129444424-129444447
HARLEQUIN_7q32.1a	HERV	HARLEQUIN	oneside	chr7	129578164	129583087	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SMKR1	ENSG00000240204	65246	AC078846.1	ENSG00000273329	21461	None	None
HARLEQUIN_7q32.1b	HERV	HARLEQUIN	oneside	chr7	129583380	129586675	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SMKR1	ENSG00000240204	70462	AC078846.1	ENSG00000273329	17873	None	None
MER61_7q32.2	HERV	MER61	prototype	chr7	130256187	130262612	+	noncoding	AC024085.1	processed_pseudogene	SENSE	ENSG00000270992	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH19_7q32.2	HERV	HERVFH19	oneside	chr7	130312651	130317104	-	noncoding	CPA4	protein_coding	ANTISENSE	ENSG00000128510	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_7q32.2	HERV	PRIMA41	oneside	chr7	130596648	130598518	+	noncoding	COPG2	protein_coding	ANTISENSE	ENSG00000158623	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7q32.2a	HERV	ERVLE	internal	chr7	130661514	130662373	+	noncoding	COPG2	protein_coding	ANTISENSE	ENSG00000158623	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7q32.2b	HERV	ERVLE	internal	chr7	130706853	130708286	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TSGA13	ENSG00000213265	19421	KLF14	ENSG00000266265	22949	None	None
ERVLE_7q32.3a	HERV	ERVLE	internal	chr7	131514572	131517384	+	noncoding	PODXL	protein_coding	ANTISENSE	ENSG00000128567	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7q32.3b	HERV	ERVLE	internal	chr7	131518658	131519348	-	noncoding	PODXL	protein_coding	SENSE	ENSG00000128567	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_7q32.3	HERV	HERVW	oneside	chr7	131820842	131824924	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009518.2	ENSG00000233263	67692	NDUFB9P2	ENSG00000236281	66590	None	None
ERVLE_7q33a	HERV	ERVLE	internal	chr7	133126066	133131195	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-92P	ENSG00000272393	43134	AC083873.1	ENSG00000237821	38221	None	None
HERVL_7q33a	HERV	HERVL	oneside	chr7	133643147	133644430	-	noncoding	EXOC4	protein_coding	ANTISENSE	ENSG00000131558	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_7q33	HERV	MER41	prototype	chr7	134086639	134091633	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LRGUK	ENSG00000155530	35666	EXOC4	ENSG00000131558	20050	None	None
ERVLE_7q33b	HERV	ERVLE	internal	chr7	134284783	134285698	+	noncoding	AC008154.2	lncRNA	SENSE	ENSG00000231098	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH48_7q33	HERV	HERVH48	oneside	chr7	134466869	134470104	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AKR1B1	ENSG00000085662	7585	AKR1B10	ENSG00000198074	57463	chr7:134467481-134467751	None
ERV316A3_7q33a	HERV	ERV316A3	internal	chr7	134470799	134472046	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AKR1B10	ENSG00000198074	55521	AKR1B1	ENSG00000085662	11515	None	None
HERVI_7q33a	HERV	HERVI	oneside	chr7	134546177	134548478	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AKR1B10	ENSG00000198074	4765	AKR1B15	ENSG00000227471	632	None	None
HERVS71_7q33	HERV	HERVS71	prototype	chr7	134548479	134557896	+	noncoding	AKR1B15	protein_coding	SENSE	ENSG00000227471	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr7:134548937-134548950,chr7:134549088-134549119
HERVI_7q33b	HERV	HERVI	internal	chr7	134557922	134559549	+	noncoding	AKR1B15	protein_coding	SENSE	ENSG00000227471	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVI_7q33c	HERV	HERVI	oneside	chr7	134563729	134565429	+	noncoding	AKR1B15	protein_coding	SENSE	ENSG00000227471	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr7:134565098-134565112
HERVW_7q33	HERV	HERVW	prototype	chr7	134585423	134593015	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AKR1B15	ENSG00000227471	5548	BPGM	ENSG00000172331	53796	None	None
ERVLE_7q33c	HERV	ERVLE	internal	chr7	134610140	134611160	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BPGM	ENSG00000172331	35651	AKR1B15	ENSG00000227471	30265	None	None
HARLEQUIN_7q33a	HERV	HARLEQUIN	oneside	chr7	135171264	135175958	+	coding	AC083862.3	lncRNA	SENSE	ENSG00000287733	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr7:135174440-135174834	chr7:135171872-135171886,chr7:135172468-135172470
HERV3_7q33	HERV	HERV3	internal	chr7	135175955	135180551	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC083862.3	ENSG00000287733	3541	WDR91	ENSG00000105875	3288	chr7:135177335-135177705	None
PABLB_7q33	HERV	PABLB	internal	chr7	135320639	135325703	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CNOT4	ENSG00000080802	36092	AC009542.2	ENSG00000276067	2887	None	None
ERV316A3_7q33b	HERV	ERV316A3	prototype	chr7	135525117	135526758	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CNOT4	ENSG00000080802	14990	NUP205	ENSG00000155561	31159	None	None
ERVLB4_7q33	HERV	ERVLB4	internal	chr7	135853042	135853801	-	noncoding	AC015987.1	lncRNA	ANTISENSE	ENSG00000224746	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_7q33a	HERV	MER4	oneside	chr7	135982177	135985073	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC024084.2	ENSG00000230649	40644	MTPN	ENSG00000105887	4818	None	None
MER4B_7q33a	HERV	MER4B	internal	chr7	135985319	135988003	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC024084.2	ENSG00000230649	37714	MTPN	ENSG00000105887	7960	None	None
MER4B_7q33b	HERV	MER4B	internal	chr7	135989988	135991173	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC024084.2	ENSG00000230649	34544	MTPN	ENSG00000105887	12629	None	None
HML1_7q33a	HERV	HML1	prototype	chr7	136260544	136264819	-	noncoding	AC078845.1,AC009784.1	lncRNA,processed_pseudogene	ANTISENSE,SENSE	ENSG00000232053,ENSG00000236503	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_7q33	HERV	HUERSP2	oneside	chr7	136509267	136512680	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009264.1	ENSG00000234352	172879	ZP3P2	ENSG00000226066	20950	None	None
HERVL_7q33b	HERV	HERVL	prototype	chr7	136573297	136579506	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009264.1	ENSG00000234352	106053	ZP3P2	ENSG00000226066	84980	None	None
ERV316A3_7q33c	HERV	ERV316A3	oneside	chr7	137207664	137209703	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTN	ENSG00000105894	17638	AC009264.1	ENSG00000234352	25557	None	None
HARLEQUIN_7q33b	HERV	HARLEQUIN	prototype	chr7	137262512	137268846	-	noncoding	PTN	protein_coding	SENSE	ENSG00000105894	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr7:137268313-137268359,chr7:137268374-137268403,chr7:137268448-137268455,chr7:137268577-137268581
ERV316A3_7q33d	HERV	ERV316A3	oneside	chr7	137631483	137636635	+	noncoding	DGKI	protein_coding	ANTISENSE	ENSG00000157680	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_7q33b	HERV	MER4	oneside	chr7	138032246	138038618	+	noncoding	AKR1D1	protein_coding	SENSE	ENSG00000122787	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_7q33c	HERV	MER4	internal	chr7	138042217	138043430	+	noncoding	AKR1D1	protein_coding	SENSE	ENSG00000122787	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_7q33c	HERV	HERVL	oneside	chr7	138249437	138255835	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC083867.1	ENSG00000201465	61308	AC008155.1	ENSG00000213238	42253	None	None
HERVH_7q33a	HERV	HERVH	prototype	chr7	138329255	138334531	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008155.1	ENSG00000213238	30771	PTMAP10	ENSG00000213237	69664	None	None
HML1_7q33b	HERV	HML1	prototype	chr7	138339205	138345859	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC008155.1	ENSG00000213238	40721	PTMAP10	ENSG00000213237	58336	None	None
HERVH_7q33b	HERV	HERVH	oneside	chr7	138364700	138368299	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008155.1	ENSG00000213238	66216	PTMAP10	ENSG00000213237	35896	None	None
HERVIP10F_7q33a	HERV	HERVIP10F	oneside	chr7	138439157	138440570	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IMPDH1P3	ENSG00000214815	120	PTMAP10	ENSG00000213237	34634	chr7:138439113-138439502	chr7:138439468-138439499
HERVIP10F_7q33b	HERV	HERVIP10F	oneside	chr7	138443083	138450635	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TRIM24	ENSG00000122779	9624	IMPDH1P3	ENSG00000214815	845	None	None
HERV3_7q34a	HERV	HERV3	prototype	chr7	138556758	138566149	-	coding	TRIM24	protein_coding	ANTISENSE	ENSG00000122779	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:138565702-138565751	chr7:138565702-138565705
ERVLB4_7q34a	HERV	ERVLB4	oneside	chr7	138779415	138781269	-	noncoding	ATP6V0A4	protein_coding	SENSE	ENSG00000105929	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_7q34a	HERV	MER41	prototype	chr7	139001188	139006286	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KIAA1549	ENSG00000122778	19870	ZC3HAV1L	ENSG00000146858	19420	None	None
ERV316A3_7q34a	HERV	ERV316A3	oneside	chr7	139112301	139113489	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTC26	ENSG00000105948	20255	ZC3HAV1	ENSG00000105939	2581	chr7:139111905-139112532	None
ERV316A3_7q34b	HERV	ERV316A3	internal	chr7	139113546	139117916	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTC26	ENSG00000105948	15828	ZC3HAV1	ENSG00000105939	3826	None	None
HERVH_7q34a	HERV	HERVH	oneside	chr7	139461465	139465412	+	noncoding	KLRG2	protein_coding	ANTISENSE	ENSG00000188883	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_7q34b	HERV	HERVH	oneside	chr7	139465719	139467404	+	noncoding	KLRG2	protein_coding	ANTISENSE	ENSG00000188883	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7q34a	HERV	ERVLE	oneside	chr7	140290502	140295513	-	noncoding	PPP1R2P6,SLC37A3	processed_pseudogene,protein_coding	ANTISENSE,SENSE	ENSG00000241661,ENSG00000157800	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERV3_7q34b	HERV	HERV3	oneside	chr7	140655523	140662300	+	noncoding	DENND2A,AC006452.2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000146966,ENSG00000285904	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV3_7q34c	HERV	HERV3	oneside	chr7	140666107	140669521	+	noncoding	DENND2A,AC006452.2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000146966,ENSG00000285904	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7q34c	HERV	ERV316A3	internal	chr7	140937326	140938764	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006006.1	ENSG00000271611	2316	CCT4P1	ENSG00000242703	59188	None	None
ERVLB4_7q34b	HERV	ERVLB4	prototype	chr7	140938765	140941905	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006006.1	ENSG00000271611	3755	CCT4P1	ENSG00000242703	56047	None	None
ERVLE_7q34b	HERV	ERVLE	internal	chr7	141540948	141542729	+	noncoding	AC073878.1	lncRNA	ANTISENSE	ENSG00000261570	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_7q34c	HERV	HERVH	prototype	chr7	141578076	141584442	-	noncoding	AGK	protein_coding	ANTISENSE	ENSG00000006530	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_7q34	HERV	HML2	oneside	chr7	141752118	141756138	-	coding	SSBP1	protein_coding	ANTISENSE	ENSG00000106028	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_7q34	HERV	LTR57	prototype	chr7	141842151	141848230	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRSS37	ENSG00000165076	664	OR9A3P	ENSG00000240031	14630	None	None
PABLB_7q34	HERV	PABLB	internal	chr7	142692316	142693634	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRBV26	ENSG00000249912	2065	TRBVA	ENSG00000239992	10447	None	None
MER41_7q34b	HERV	MER41	prototype	chr7	142703799	142708967	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRBV26	ENSG00000249912	7616	TRBVB	ENSG00000241911	2417	None	chr7:142704166-142704178,chr7:142704181-142704182
ERVLB4_7q34c	HERV	ERVLB4	internal	chr7	142741189	142742810	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRBV29-1	ENSG00000232869	295	PRSS1	ENSG00000204983	6658	None	None
ERVLE_7q34c	HERV	ERVLE	internal	chr7	142840535	142841733	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRBV30	ENSG00000237254	27136	EPHB6	ENSG00000106123	13328	None	None
ERV316A3_7q34d	HERV	ERV316A3	oneside	chr7	143013149	143015161	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR9A2	ENSG00000179468	10997	KEL	ENSG00000197993	50786	None	None
HERVH_7q34d	HERV	HERVH	prototype	chr7	143105117	143110504	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR6W1P	ENSG00000179420	41532	PIP	ENSG00000159763	21573	None	None
MER101_7q34	HERV	MER101	internal	chr7	143120533	143124752	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR6W1P	ENSG00000179420	56948	PIP	ENSG00000159763	7325	None	None
ERVLE_7q34d	HERV	ERVLE	internal	chr7	143154803	143160197	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TAS2R39	ENSG00000236398	23222	PIP	ENSG00000159763	15064	None	None
ERVLE_7q35a	HERV	ERVLE	internal	chr7	143451460	143452028	-	noncoding	EPHA1-AS1	lncRNA	ANTISENSE	ENSG00000229153	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7q35b	HERV	ERVLE	internal	chr7	143452046	143452782	+	noncoding	EPHA1-AS1	lncRNA	SENSE	ENSG00000229153	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_7q35a	HERV	HERVH	prototype	chr7	143537279	143542613	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PAICSP5	ENSG00000229877	2573	AC073264.1	ENSG00000229977	4115	None	None
HERVH_7q35b	HERV	HERVH	prototype	chr7	143786848	143792193	+	noncoding	AC099548.2	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000253882	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_7q35	HERV	MER41	internal	chr7	144464665	144465750	+	noncoding	TPK1	protein_coding	ANTISENSE	ENSG00000196511	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_7q35	HERV	HERVL40	oneside	chr7	144791302	144793570	+	noncoding	TPK1	protein_coding	ANTISENSE	ENSG00000196511	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7q35c	HERV	ERVLE	oneside	chr7	144935896	144937389	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EI24P4	ENSG00000236343	67669	RN7SKP174	ENSG00000200673	85812	None	None
ERV316A3_7q35a	HERV	ERV316A3	internal	chr7	144975742	144977674	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP174	ENSG00000200673	125658	EI24P4	ENSG00000236343	27384	None	None
ERV316A3_7q35b	HERV	ERV316A3	internal	chr7	145122385	145124984	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004911.1	ENSG00000226592	144530	RPL7P59	ENSG00000225918	81444	None	None
ERVLE_7q35d	HERV	ERVLE	internal	chr7	145187419	145188369	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004911.1	ENSG00000226592	81145	RPL7P59	ENSG00000225918	146478	None	None
ERVLE_7q35e	HERV	ERVLE	internal	chr7	145454096	145455032	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004911.1	ENSG00000226592	183712	DPY19L4P2	ENSG00000231839	128165	None	None
ERVLE_7q35f	HERV	ERVLE	internal	chr7	145511764	145514612	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DPY19L4P2	ENSG00000231839	68585	AC004911.1	ENSG00000226592	241380	None	None
ERVLE_7q35g	HERV	ERVLE	internal	chr7	145591204	145595304	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DPY19L4P2	ENSG00000231839	6387	AC006007.1	ENSG00000230746	80375	None	None
ERV316A3_7q35c	HERV	ERV316A3	internal	chr7	145685191	145686162	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006007.1	ENSG00000230746	3822	AC073308.1	ENSG00000280144	363900	None	None
MER61_7q35	HERV	MER61	prototype	chr7	145686833	145692990	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006007.1	ENSG00000230746	5464	AC073308.1	ENSG00000280144	357072	None	None
HUERSP2_7q35	HERV	HUERSP2	oneside	chr7	145749690	145753381	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073308.1	ENSG00000280144	296681	AC006007.1	ENSG00000230746	68321	None	None
ERVLE_7q35h	HERV	ERVLE	internal	chr7	145785997	145787226	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073308.1	ENSG00000280144	262836	AC006007.1	ENSG00000230746	104628	None	None
ERVLE_7q35i	HERV	ERVLE	internal	chr7	145793620	145794928	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073308.1	ENSG00000280144	255134	AC006007.1	ENSG00000230746	112251	None	None
ERVLE_7q35j	HERV	ERVLE	internal	chr7	145929430	145931118	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006007.1	ENSG00000230746	248061	AC073308.1	ENSG00000280144	118944	None	None
HERVP71A_7q35	HERV	HERVP71A	prototype	chr7	146050928	146058901	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CNTNAP2	ENSG00000174469	57101	AC073308.1	ENSG00000280144	562	None	None
HERVH_7q35c	HERV	HERVH	oneside	chr7	146243819	146249225	-	noncoding	CNTNAP2	protein_coding	ANTISENSE	ENSG00000174469	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:146245932-146246107,chr7:146246898-146247321	chr7:146248751-146248761
HERVL18_7q35	HERV	HERVL18	prototype	chr7	146503833	146510377	-	coding	CNTNAP2	protein_coding	ANTISENSE	ENSG00000174469	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_7q36.1a	HERV	HERVH	prototype	chr7	148309416	148315615	-	noncoding	CNTNAP2	protein_coding	ANTISENSE	ENSG00000174469	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_7q36.1a	HERV	HERVL	internal	chr7	148575970	148579927	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005229.2	ENSG00000213210	474	AC006974.2	ENSG00000283648	3793	chr7:148579470-148579714	chr7:148579470-148579478
HERVL_7q36.1b	HERV	HERVL	prototype	chr7	149051314	149058264	+	noncoding	COX6B1P1	processed_pseudogene	SENSE	ENSG00000234565	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER101_7q36.1a	HERV	MER101	oneside	chr7	149319536	149324081	+	noncoding	AC004941.2	processed_pseudogene	ANTISENSE	ENSG00000231397	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr7:149321018-149321109	None
MER101_7q36.1b	HERV	MER101	oneside	chr7	149324390	149328287	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004941.2	ENSG00000231397	2298	NPM1P12	ENSG00000215311	5737	None	None
LTR25_7q36.1	HERV	LTR25	internal	chr7	149527865	149535145	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF746	ENSG00000181220	30048	ZNF767P	ENSG00000133624	12009	None	None
HERVIP10FH_7q36.1	HERV	HERVIP10FH	oneside	chr7	149568739	149570100	+	noncoding	ZNF767P	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000133624	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:149569609-149569947	None
HARLEQUIN_7q36.1	HERV	HARLEQUIN	internal	chr7	149571228	149572691	+	noncoding	ZNF767P	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000133624	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7q36.1a	HERV	ERVLE	internal	chr7	149585730	149586958	-	noncoding	ZNF767P	transcribed_unprocessed_pseudogene	SENSE	ENSG00000133624	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7q36.1b	HERV	ERVLE	internal	chr7	149640474	149641418	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRBA1	ENSG00000133619	73363	ZNF767P	ENSG00000133624	15722	None	None
ERVLE_7q36.1c	HERV	ERVLE	internal	chr7	149642969	149644517	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRBA1	ENSG00000133619	70264	ZNF767P	ENSG00000133624	18217	None	None
HML3_7q36.1a	HERV	HML3	internal	chr7	149649026	149650666	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRBA1	ENSG00000133619	64115	ZNF767P	ENSG00000133624	24274	None	None
HML3_7q36.1b	HERV	HML3	oneside	chr7	149650724	149651977	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRBA1	ENSG00000133619	62804	ZNF767P	ENSG00000133624	25972	None	None
HERVW_7q36.1	HERV	HERVW	prototype	chr7	149671597	149677221	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF767P	ENSG00000133624	46845	KRBA1	ENSG00000133619	37560	None	None
ERVLE_7q36.1d	HERV	ERVLE	internal	chr7	149677246	149678048	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRBA1	ENSG00000133619	36733	ZNF767P	ENSG00000133624	52494	None	None
MER41_7q36.1	HERV	MER41	prototype	chr7	149681756	149687599	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRBA1	ENSG00000133619	27182	ZNF767P	ENSG00000133624	57004	None	None
HERVE_7q36.1	HERV	HERVE	internal	chr7	150040118	150042015	-	noncoding	AC092666.1	lncRNA	ANTISENSE	ENSG00000241449	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7q36.1a	HERV	ERV316A3	internal	chr7	150257200	150259082	+	noncoding	ACTR3C	protein_coding	ANTISENSE	ENSG00000106526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_7q36.1b	HERV	HERVH	prototype	chr7	150307240	150313286	+	coding	ACTR3C	protein_coding	ANTISENSE	ENSG00000106526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:150308017-150308225	chr7:150309491-150309501,chr7:150313132-150313138
ERVLB4_7q36.1a	HERV	ERVLB4	oneside	chr7	150458095	150461120	-	noncoding	GIMAP8	protein_coding	ANTISENSE	ENSG00000171115	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK14C_7q36.1	HERV	HERVK14C	oneside	chr7	150561073	150565629	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GIMAP4	ENSG00000133574	1740	ALDH7A1P3	ENSG00000243853	18975	None	chr7:150564098-150564103
HML6_7q36.1	HERV	HML6	oneside	chr7	150582645	150585004	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GIMAP4	ENSG00000133574	8692	AC069304.3	ENSG00000271568	18557	None	None
MER34B_7q36.1	HERV	MER34B	internal	chr7	150619449	150620902	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GIMAP6	ENSG00000133561	4473	AC069304.1	ENSG00000232361	4685	chr7:150620542-150620611	None
ERV316A3_7q36.1b	HERV	ERV316A3	internal	chr7	150642257	150643344	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069304.2	ENSG00000270990	33489	GIMAP6	ENSG00000133561	9609	None	None
HERV4_7q36.1	HERV	HERV4	oneside	chr7	150655056	150658080	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069304.2	ENSG00000270990	18753	GIMAP6	ENSG00000133561	22408	None	None
ERVLE_7q36.1e	HERV	ERVLE	internal	chr7	151291843	151294792	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NUB1	ENSG00000013374	46907	SMARCD3	ENSG00000082014	13947	None	None
ERVLE_7q36.1f	HERV	ERVLE	internal	chr7	151590282	151592361	+	noncoding	PRKAG2	protein_coding	ANTISENSE	ENSG00000106617	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7q36.1b	HERV	ERVLB4	internal	chr7	151723084	151724342	-	noncoding	PRKAG2	protein_coding	SENSE	ENSG00000106617	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7q36.1c	HERV	ERV316A3	internal	chr7	151949508	151951823	+	noncoding	AC074257.2	lncRNA	ANTISENSE	ENSG00000227562	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_7q36.1c	HERV	HML3	prototype	chr7	152038128	152044503	-	noncoding	GALNT11	protein_coding	ANTISENSE	ENSG00000178234	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_7q36.2a	HERV	MER4B	internal	chr7	152965448	152967152	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079809.1	ENSG00000224104	177161	AC006348.1	ENSG00000286565	28467	None	None
MER4B_7q36.2b	HERV	MER4B	internal	chr7	152967188	152969494	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079809.1	ENSG00000224104	174819	AC006348.1	ENSG00000286565	30207	None	None
ERVLE_7q36.2a	HERV	ERVLE	internal	chr7	153060323	153062035	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079809.1	ENSG00000224104	82278	AC006348.1	ENSG00000286565	123342	None	None
ERVLE_7q36.2b	HERV	ERVLE	internal	chr7	153101821	153103202	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006348.1	ENSG00000286565	164840	AC079809.1	ENSG00000224104	41111	None	None
ERVLE_7q36.2c	HERV	ERVLE	internal	chr7	153237359	153239119	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079809.1	ENSG00000224104	92771	LINC01287	ENSG00000234722	116246	None	None
ERVLE_7q36.2d	HERV	ERVLE	internal	chr7	153377097	153380583	-	noncoding	LINC01287	lncRNA	SENSE	ENSG00000234722	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_7q36.2	HERV	HERVFRD	prototype	chr7	153389796	153397102	+	noncoding	LINC01287,AC073236.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000234722,ENSG00000285524	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVFC1_7q36.2	HERV	HERVFC1	oneside	chr7	153409398	153414153	-	noncoding	LINC01287	lncRNA	SENSE	ENSG00000234722	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr7:153413958-153413985
ERVLE_7q36.2e	HERV	ERVLE	internal	chr7	153415922	153417117	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PAXBP1P1	ENSG00000233489	32312	LINC01287	ENSG00000234722	1937	None	None
ERV316A3_7q36.2a	HERV	ERV316A3	oneside	chr7	153604689	153607835	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005998.1	ENSG00000287744	107239	PAXBP1P1	ENSG00000233489	154814	None	None
ERV316A3_7q36.2b	HERV	ERV316A3	prototype	chr7	153666797	153669712	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PAXBP1P1	ENSG00000233489	216922	AC005998.1	ENSG00000287744	45362	None	None
ERVLE_7q36.2f	HERV	ERVLE	internal	chr7	153678205	153680895	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005998.1	ENSG00000287744	34179	PAXBP1P1	ENSG00000233489	228330	None	None
ERV316A3_7q36.2c	HERV	ERV316A3	internal	chr7	153710404	153712297	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005998.1	ENSG00000287744	2777	PAXBP1P1	ENSG00000233489	260529	None	None
ERVLE_7q36.2g	HERV	ERVLE	internal	chr7	155042104	155042754	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HTR5A-AS1	ENSG00000220575	24280	PAXIP1-AS1	ENSG00000273344	36401	None	None
ERVLE_7q36.2h	HERV	ERVLE	internal	chr7	155055085	155059379	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PAXIP1-AS1	ENSG00000273344	49382	HTR5A-AS1	ENSG00000220575	7655	None	None
ERV316A3_7q36.2d	HERV	ERV316A3	internal	chr7	155060426	155062430	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HTR5A-AS1	ENSG00000220575	4604	PAXIP1-AS1	ENSG00000273344	54723	None	None
ERV316A3_7q36.2e	HERV	ERV316A3	oneside	chr7	155063546	155066939	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HTR5A-AS1	ENSG00000220575	95	PAXIP1-AS1	ENSG00000273344	57843	None	None
HERVL40_7q36.2	HERV	HERVL40	internal	chr7	155099625	155100504	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HTR5A	ENSG00000157219	12233	AC092628.2	ENSG00000274637	5558	None	None
HML3_7q36.3	HERV	HML3	prototype	chr7	155238195	155244187	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099552.2	ENSG00000225612	22950	AC099552.4	ENSG00000278998	14344	None	None
ERV316A3_7q36.3a	HERV	ERV316A3	internal	chr7	156108240	156109449	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF093117.1	ENSG00000207061	76673	AC021218.1	ENSG00000204876	141897	None	None
ERV316A3_7q36.3b	HERV	ERV316A3	oneside	chr7	156189789	156194382	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093813.1	ENSG00000270584	69165	AF093117.1	ENSG00000207061	3566	chr7:156193962-156194098	None
ERV316A3_7q36.3c	HERV	ERV316A3	oneside	chr7	156536513	156538045	-	noncoding	LINC01006	lncRNA	SENSE	ENSG00000182648	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7q36.3	HERV	ERVLE	internal	chr7	156613046	156613580	+	noncoding	LINC01006	lncRNA	ANTISENSE	ENSG00000182648	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7q36.3a	HERV	ERVLB4	internal	chr7	156819636	156821920	+	noncoding	LMBR1	protein_coding	ANTISENSE	ENSG00000105983	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7q36.3b	HERV	ERVLB4	internal	chr7	158124049	158124652	+	noncoding	PTPRN2	protein_coding	ANTISENSE	ENSG00000155093	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7q36.3c	HERV	ERVLB4	internal	chr7	158314632	158316372	+	noncoding	PTPRN2	protein_coding	ANTISENSE	ENSG00000155093	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_7q36.3	HERV	MER4B	prototype	chr7	158844969	158853451	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ESYT2	ENSG00000117868	14716	WDR60	ENSG00000126870	3107	None	None
MER34B_7q36.3a	HERV	MER34B	internal	chr7	159077641	159078394	+	noncoding	VIPR2	protein_coding	ANTISENSE	ENSG00000106018	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_7q36.3b	HERV	MER34B	internal	chr7	159132209	159133865	+	noncoding	VIPR2	protein_coding	ANTISENSE	ENSG00000106018	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_7q36.3c	HERV	MER34B	internal	chr7	159133955	159135153	+	noncoding	VIPR2	protein_coding	ANTISENSE	ENSG00000106018	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_7q36.3d	HERV	MER34B	internal	chr7	159160440	159162646	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PIP5K1P2	ENSG00000229435	68789	VIPR2	ENSG00000106018	15573	None	None
MER101_8p23.3	HERV	MER101	internal	chr8	256906	257938	+	noncoding	ZNF596	protein_coding	SENSE	ENSG00000172748	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8p23.3	HERV	ERVLB4	internal	chr8	1960182	1960885	+	noncoding	AC019257.9	lncRNA	ANTISENSE	ENSG00000285957	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8p23.2a	HERV	ERVLE	internal	chr8	2376441	2377623	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MYOM2	ENSG00000036448	210889	AC245519.1	ENSG00000253444	116253	None	None
ERV316A3_8p23.2	HERV	ERV316A3	internal	chr8	2721887	2722568	+	noncoding	AC246817.2	lncRNA	ANTISENSE	ENSG00000254319	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8p23.2b	HERV	ERVLE	internal	chr8	2785093	2786173	-	noncoding	AC246817.1	lncRNA	ANTISENSE	ENSG00000253853	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_8p23.2a	HERV	HERVL40	oneside	chr8	2914894	2916807	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023296.1	ENSG00000288580	6761	AC115485.1	ENSG00000287740	36978	chr8:2916501-2916845	None
HERVH_8p23.2a	HERV	HERVH	prototype	chr8	3237992	3243711	-	noncoding	CSMD1	protein_coding	SENSE	ENSG00000183117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr8:3238095-3238485	None
ERVLE_8p23.2c	HERV	ERVLE	internal	chr8	3461218	3461734	+	noncoding	CSMD1	protein_coding	ANTISENSE	ENSG00000183117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_8p23.2	HERV	MER34B	internal	chr8	5183965	5186997	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL318P	ENSG00000242079	41258	AC007718.1	ENSG00000278256	176374	None	None
HERVL40_8p23.2b	HERV	HERVL40	prototype	chr8	5223947	5230944	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL318P	ENSG00000242079	81240	AC007718.1	ENSG00000278256	132427	None	chr8:5229393-5229394
ERVLB4_8p23.2a	HERV	ERVLB4	oneside	chr8	5264725	5265925	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007718.1	ENSG00000278256	97446	RN7SL318P	ENSG00000242079	122018	None	None
ERVL_8p23.2	HERV	ERVL	internal	chr8	5266996	5268327	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007718.1	ENSG00000278256	95044	RN7SL318P	ENSG00000242079	124289	None	None
HERVH_8p23.2b	HERV	HERVH	prototype	chr8	5436466	5442246	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091193.1	ENSG00000271248	12972	AC007718.1	ENSG00000278256	72816	None	None
ERVLE_8p23.2d	HERV	ERVLE	internal	chr8	5513958	5516461	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004944.1	ENSG00000253510	4832	AC084768.1	ENSG00000254007	143218	None	None
HML5_8p23.2a	HERV	HML5	prototype	chr8	5798511	5803624	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087369.1	ENSG00000253571	45073	AC084768.2	ENSG00000275461	81707	None	None
HERVIP10F_8p23.2	HERV	HERVIP10F	prototype	chr8	5822394	5831120	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087369.1	ENSG00000253571	17577	AC084768.2	ENSG00000275461	105590	None	None
HML5_8p23.2b	HERV	HML5	prototype	chr8	5852519	5857560	-	noncoding	AC087369.2	lncRNA	SENSE	ENSG00000286969	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML5_8p23.2c	HERV	HML5	prototype	chr8	5874190	5880013	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP159	ENSG00000222589	30932	AC087369.2	ENSG00000286969	19213	None	None
ERVLB4_8p23.2b	HERV	ERVLB4	internal	chr8	5951072	5952200	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP159	ENSG00000222589	39836	AC079054.1	ENSG00000253189	84233	None	None
ERVLB4_8p23.2c	HERV	ERVLB4	oneside	chr8	6214345	6220001	+	noncoding	AC009435.1	lncRNA	ANTISENSE	ENSG00000253880	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8p23.1a	HERV	ERV316A3	internal	chr8	6387550	6388169	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016065.1	ENSG00000246089	15382	AC009435.1	ENSG00000253880	130013	None	None
MER41_8p23.1	HERV	MER41	internal	chr8	6396248	6399098	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC009435.1	ENSG00000253880	138711	AC016065.1	ENSG00000246089	4453	None	None
HERVE_8p23.1a	HERV	HERVE	oneside	chr8	7068389	7073209	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DEFA5	ENSG00000164816	11650	AF238378.1	ENSG00000255273	9762	None	None
ERVLB4_8p23.1a	HERV	ERVLB4	internal	chr8	7089667	7090269	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF228730.5	ENSG00000284620	1833	AF238378.1	ENSG00000255273	6339	None	None
HERVK11_8p23.1a	HERV	HERVK11	prototype	chr8	7152780	7159835	-	noncoding	AF228730.5	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000284620	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8p23.1b	HERV	ERVLB4	internal	chr8	7223764	7224313	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF228730.4	ENSG00000284614	1834	AF228730.6	ENSG00000284728	3540	None	None
ERVLB4_8p23.1c	HERV	ERVLB4	internal	chr8	7229906	7230454	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF228730.6	ENSG00000284728	1833	AF228730.3	ENSG00000255025	7832	None	None
HERVE_8p23.1b	HERV	HERVE	internal	chr8	7247974	7250760	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM90A15P	ENSG00000230045	6144	OR7E125P	ENSG00000177306	403	None	None
HERVE_8p23.1c	HERV	HERVE	internal	chr8	7250896	7252032	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	FAM90A15P	ENSG00000230045	4872	OR7E125P	ENSG00000177306	3325	None	None
HERVH_8p23.1a	HERV	HERVH	prototype	chr8	7402290	7408174	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF705G	ENSG00000215372	16732	DEFB4B	ENSG00000177257	6681	None	None
HML2_8p23.1a	HERV	HML2	oneside	chr8	7497875	7502767	-	coding	DEFB107B	protein_coding	ANTISENSE	ENSG00000198129	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_8p23.1b	HERV	HML2	oneside	chr8	7502828	7507337	-	coding	DEFB107B	protein_coding	ANTISENSE	ENSG00000198129	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_8p23.1a	HERV	MER4B	internal	chr8	7530487	7534178	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRR23D1	ENSG00000255251	5450	AC134684.7	ENSG00000285659	3190	None	None
MER4B_8p23.1b	HERV	MER4B	internal	chr8	7534550	7535491	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRR23D1	ENSG00000255251	4137	AC134684.7	ENSG00000285659	7253	None	None
HERVE_8p23.1d	HERV	HERVE	internal	chr8	7587548	7591600	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC134684.9	ENSG00000285765	4895	OR7E157P	ENSG00000233176	406	None	None
ERVLB4_8p23.1d	HERV	ERVLB4	internal	chr8	7609090	7609638	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC134684.6	ENSG00000284617	1835	AC134684.1	ENSG00000254796	7823	None	None
ERVLB4_8p23.1e	HERV	ERVLB4	internal	chr8	7615219	7615787	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084121.3	ENSG00000284655	64522	AC134684.6	ENSG00000284617	3529	None	None
ERVLB4_8p23.1f	HERV	ERVLB4	internal	chr8	7682360	7682909	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084121.3	ENSG00000284655	1834	AC084121.4	ENSG00000284698	3514	None	None
ERVLB4_8p23.1g	HERV	ERVLB4	internal	chr8	7688476	7689024	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084121.4	ENSG00000284698	1833	AC084121.2	ENSG00000254889	7806	None	None
HERVE_8p23.1e	HERV	HERVE	internal	chr8	7706519	7709299	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084121.9	ENSG00000285814	6144	OR7E154P	ENSG00000254715	406	None	None
HERVE_8p23.1f	HERV	HERVE	internal	chr8	7709435	7710571	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC084121.9	ENSG00000285814	4872	OR7E154P	ENSG00000254715	3322	None	None
MER4B_8p23.1c	HERV	MER4B	internal	chr8	7785551	7790553	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRR23D2	ENSG00000255378	4138	AC084121.1	ENSG00000254776	3163	None	None
HERVH_8p23.1b	HERV	HERVH	prototype	chr8	7903419	7909304	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF705B	ENSG00000215356	17033	DEFB4A	ENSG00000171711	6703	None	None
HERVE_8p23.1g	HERV	HERVE	internal	chr8	8035540	8039592	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FAM90A12P	ENSG00000254229	3235	OR7E96P	ENSG00000227013	386	None	None
ERVLB4_8p23.1h	HERV	ERVLB4	internal	chr8	8057078	8057626	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105233.4	ENSG00000284603	1833	AC105233.2	ENSG00000253881	7811	None	None
ERVLB4_8p23.1i	HERV	ERVLB4	internal	chr8	8063220	8063780	-	noncoding	AC105233.5	lncRNA	ANTISENSE	ENSG00000284606	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11_8p23.1b	HERV	HERVK11	prototype	chr8	8127641	8134678	+	coding	AC105233.5	lncRNA	SENSE	ENSG00000284606	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr8:8128543-8128545
HERVS71_8p23.1a	HERV	HERVS71	prototype	chr8	8138446	8145756	+	noncoding	AC105233.5	lncRNA	SENSE	ENSG00000284606	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_8p23.1c	HERV	HERVH	oneside	chr8	8168723	8172260	+	noncoding	AC105233.5,ENPP7P1,FAM85B	lncRNA,transcribed_unprocessed_pseudogene,lncRNA	SENSE,SENSE,ANTISENSE	ENSG00000284606,ENSG00000249188,ENSG00000253893	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_8p23.1h	HERV	HERVE	oneside	chr8	8172261	8180584	+	coding	AC105233.5,ENPP7P1,FAM85B	lncRNA,transcribed_unprocessed_pseudogene,lncRNA	SENSE,SENSE,ANTISENSE	ENSG00000284606,ENSG00000249188,ENSG00000253893	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_8p23.1d	HERV	HERVH	oneside	chr8	8180585	8183856	+	noncoding	AC105233.5,ENPP7P1,FAM85B	lncRNA,transcribed_unprocessed_pseudogene,lncRNA	SENSE,SENSE,ANTISENSE	ENSG00000284606,ENSG00000249188,ENSG00000253893	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_8p23.1c	HERV	HML2	prototype	chr8	8197178	8206699	+	coding	AC105233.5,ENPP7P1,FAM85B	lncRNA,transcribed_unprocessed_pseudogene,lncRNA	SENSE,SENSE,ANTISENSE	ENSG00000284606,ENSG00000249188,ENSG00000253893	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVI_8p23.1	HERV	HERVI	prototype	chr8	8358592	8363270	-	noncoding	PRAG1	protein_coding	SENSE	ENSG00000275342	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr8:8362731-8362739
HERVH_8p23.1e	HERV	HERVH	prototype	chr8	9058914	9065195	-	noncoding	ERI1	protein_coding	ANTISENSE	ENSG00000104626	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:9062663-9062670,chr8:9062672-9062693
HERVE_8p23.1i	HERV	HERVE	oneside	chr8	9249336	9250815	+	noncoding	AC022784.1	lncRNA	SENSE	ENSG00000248538	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8p23.1j	HERV	ERVLB4	oneside	chr8	9544115	9548175	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021242.3	ENSG00000272267	6969	AC021242.1	ENSG00000249050	86697	None	None
HML5_8p23.1a	HERV	HML5	oneside	chr8	9799827	9802982	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TNKS	ENSG00000173273	17481	LINC00599	ENSG00000253230	96889	None	None
HERVH_8p23.1f	HERV	HERVH	prototype	chr8	9802983	9809297	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TNKS	ENSG00000173273	20637	LINC00599	ENSG00000253230	90574	None	None
HML5_8p23.1b	HERV	HML5	oneside	chr8	9809298	9812408	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TNKS	ENSG00000173273	26952	LINC00599	ENSG00000253230	87463	None	None
ERV316A3_8p23.1b	HERV	ERV316A3	internal	chr8	9873464	9876693	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TNKS	ENSG00000173273	91118	LINC00599	ENSG00000253230	23178	None	None
ERV316A3_8p23.1c	HERV	ERV316A3	oneside	chr8	9882724	9884677	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TNKS	ENSG00000173273	100378	LINC00599	ENSG00000253230	15194	None	None
ERV316A3_8p23.1d	HERV	ERV316A3	internal	chr8	10239586	10241083	-	noncoding	MSRA	protein_coding	ANTISENSE	ENSG00000175806	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_8p23.1	HERV	ERVL	internal	chr8	10430967	10432280	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MSRA	ENSG00000175806	2076	AC104964.3	ENSG00000261451	1392	None	None
ERVLE_8p23.1a	HERV	ERVLE	internal	chr8	10469865	10470516	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104964.1	ENSG00000253641	4049	AC104964.3	ENSG00000261451	31553	None	None
ERVLE_8p23.1b	HERV	ERVLE	internal	chr8	10485356	10487565	+	noncoding	PRSS51,AC104964.4	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000253649,ENSG00000272505	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_8p23.1g	HERV	HERVH	prototype	chr8	10571081	10577329	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRSS55	ENSG00000184647	16915	RP1L1	ENSG00000183638	29020	None	None
ERVLE_8p23.1c	HERV	ERVLE	internal	chr8	10620267	10621197	+	noncoding	RP1L1	protein_coding	ANTISENSE	ENSG00000183638	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8p23.1d	HERV	ERVLE	internal	chr8	11335970	11337793	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TDH	ENSG00000154316	1844	SLC35G5	ENSG00000177710	3762	None	None
ERVLE_8p23.1e	HERV	ERVLE	internal	chr8	11338021	11340451	+	noncoding	TDH	transcribed_unitary_pseudogene	SENSE	ENSG00000154316	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVE_8p23.1j	HERV	HERVE	unknown	chr8	11907117	11913562	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR7E158P	ENSG00000254948	6338	AC025857.1	ENSG00000255144	10247	None	None
HERVE_8p23.1k	HERV	HERVE	oneside	chr8	11933040	11936183	-	coding	OR7E161P,AC107918.5	transcribed_unprocessed_pseudogene,lncRNA	SENSE,SENSE	ENSG00000206014,ENSG00000287755	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8p23.1k	HERV	ERVLB4	internal	chr8	12016861	12017429	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107918.4	ENSG00000284610	1668	AC107918.2	ENSG00000255016	7815	None	None
HERVE_8p23.1l	HERV	HERVE	internal	chr8	12037973	12042027	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DEFB131C	ENSG00000254700	1479	AC107918.1	ENSG00000254817	3361	None	None
HML2_8p23.1d	HERV	HML2	prototype	chr8	12216461	12225988	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DEFB131D	ENSG00000237215	64083	ENPP7P12	ENSG00000254527	10072	None	chr8:12223176-12223178
HERVE_8p23.1m	HERV	HERVE	internal	chr8	12284538	12288592	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DEFB131D	ENSG00000237215	1479	ENPP7P12	ENSG00000254527	78149	None	None
HML2_8p23.1e	HERV	HML2	oneside	chr8	12458983	12461064	-	noncoding	ENPP7P6	transcribed_unprocessed_pseudogene	SENSE	ENSG00000255549	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_8p23.1f	HERV	HML2	oneside	chr8	12461223	12468498	-	coding	ENPP7P6,AC068587.4	transcribed_unprocessed_pseudogene,lncRNA	SENSE,SENSE	ENSG00000255549,ENSG00000283674	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_8p23.1h	HERV	HERVH	oneside	chr8	12481807	12485078	-	noncoding	ENPP7P6,AC068587.4	transcribed_unprocessed_pseudogene,lncRNA	SENSE,SENSE	ENSG00000255549,ENSG00000283674	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_8p23.1n	HERV	HERVE	oneside	chr8	12485079	12493402	-	coding	ENPP7P6,AC068587.4	transcribed_unprocessed_pseudogene,lncRNA	SENSE,SENSE	ENSG00000255549,ENSG00000283674	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_8p23.1i	HERV	HERVH	oneside	chr8	12493403	12496943	-	noncoding	ENPP7P6,AC068587.4	transcribed_unprocessed_pseudogene,lncRNA	SENSE,SENSE	ENSG00000255549,ENSG00000283674	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVS71_8p23.1b	HERV	HERVS71	prototype	chr8	12519908	12527223	-	noncoding	AC068587.4	lncRNA	SENSE	ENSG00000283674	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11_8p23.1c	HERV	HERVK11	prototype	chr8	12531005	12538042	-	coding	AC068587.4	lncRNA	SENSE	ENSG00000283674	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8p23.1l	HERV	ERVLB4	internal	chr8	12603194	12603754	+	noncoding	AC068587.4	lncRNA	ANTISENSE	ENSG00000283674	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8p23.1m	HERV	ERVLB4	internal	chr8	12609342	12609890	+	noncoding	AC068587.4	lncRNA	ANTISENSE	ENSG00000283674	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8p23.1n	HERV	ERVLB4	internal	chr8	12661122	12661730	+	noncoding	AC068587.4	lncRNA	ANTISENSE	ENSG00000283674	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8p23.1o	HERV	ERVLB4	internal	chr8	12667329	12667877	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068587.4	ENSG00000283674	1741	AC068587.1	ENSG00000254581	8158	None	None
HERVE_8p23.1o	HERV	HERVE	internal	chr8	12688391	12692435	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR7E15P	ENSG00000254917	3872	OR7E8P	ENSG00000177400	3238	chr8:12689816-12690160,chr8:12691055-12691417	chr8:12691077-12691093
HERVE_8p23.1p	HERV	HERVE	oneside	chr8	12708044	12712837	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR5692A2	ENSG00000264512	6295	OR7E10P	ENSG00000254724	3988	None	None
ERVLE_8p22a	HERV	ERVLE	internal	chr8	12976266	12979702	-	noncoding	TRMT9B	protein_coding	ANTISENSE	ENSG00000250305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr8:12976674-12977060	None
ERV316A3_8p22a	HERV	ERV316A3	prototype	chr8	13750377	13754086	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022880.1	ENSG00000255413	7596	AC022690.2	ENSG00000254753	90015	None	None
ERVLE_8p22b	HERV	ERVLE	internal	chr8	13876540	13880538	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022690.1	ENSG00000254425	28693	AC022690.2	ENSG00000254753	27431	None	None
HERVL_8p22a	HERV	HERVL	internal	chr8	13899603	13903736	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022690.2	ENSG00000254753	50494	AC022690.1	ENSG00000254425	5495	None	None
ERVLB4_8p22	HERV	ERVLB4	oneside	chr8	13956594	13961238	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022690.1	ENSG00000254425	46814	AC023538.1	ENSG00000255437	61449	None	None
LTR57_8p22	HERV	LTR57	prototype	chr8	14176643	14182603	+	noncoding	SGCZ	protein_coding	ANTISENSE	ENSG00000185053	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8p22b	HERV	ERV316A3	internal	chr8	14337089	14338154	+	noncoding	SGCZ	protein_coding	ANTISENSE	ENSG00000185053	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_8p22	HERV	MER101	internal	chr8	14440936	14442110	+	noncoding	SGCZ	protein_coding	ANTISENSE	ENSG00000185053	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_8p22	HERV	MER61	prototype	chr8	15163869	15169579	+	noncoding	SGCZ	protein_coding	ANTISENSE	ENSG00000185053	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_8p22	HERV	HERVL74	internal	chr8	15319779	15321214	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SGCZ	ENSG00000185053	81348	AC103851.1	ENSG00000249368	4082	None	None
ERV316A3_8p22c	HERV	ERV316A3	internal	chr8	15494268	15496771	-	noncoding	TUSC3	protein_coding	ANTISENSE	ENSG00000104723	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_8p22a	HERV	HERVL40	internal	chr8	15634662	15636483	-	noncoding	TUSC3	protein_coding	ANTISENSE	ENSG00000104723	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_8p22b	HERV	HERVL40	prototype	chr8	15794456	15800197	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPM1AP1	ENSG00000250483	5952	TUSC3	ENSG00000104723	27807	None	None
ERV316A3_8p22d	HERV	ERV316A3	oneside	chr8	15974047	15975187	-	noncoding	AC018437.2	lncRNA	ANTISENSE	ENSG00000253648	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8p22e	HERV	ERV316A3	oneside	chr8	16024842	16026202	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MSR1	ENSG00000038945	81676	AC018437.2	ENSG00000253648	24518	None	None
HERVIP10F_8p22	HERV	HERVIP10F	oneside	chr8	16098636	16100661	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018437.2	ENSG00000253648	98312	MSR1	ENSG00000038945	7217	None	chr8:16099674-16099678
ERVLE_8p22c	HERV	ERVLE	internal	chr8	16200266	16201158	+	noncoding	MSR1	protein_coding	ANTISENSE	ENSG00000038945	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8p22d	HERV	ERVLE	internal	chr8	16436942	16438382	-	noncoding	MSR1	protein_coding	SENSE	ENSG00000038945	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8p22f	HERV	ERV316A3	oneside	chr8	16504465	16505806	-	noncoding	MSR1	protein_coding	SENSE	ENSG00000038945	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8p22e	HERV	ERVLE	internal	chr8	16525645	16526225	+	noncoding	MSR1	protein_coding	ANTISENSE	ENSG00000038945	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8p22g	HERV	ERV316A3	oneside	chr8	16964142	16966917	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011586.2	ENSG00000253496	49098	FGF20	ENSG00000078579	25264	None	None
ERVLE_8p22f	HERV	ERVLE	internal	chr8	17419248	17421351	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTMR7	ENSG00000003987	5720	ADAM24P	ENSG00000214607	48167	None	None
HML2_8p22	HERV	HML2	oneside	chr8	17908096	17916431	-	coding	FGL1	protein_coding	SENSE	ENSG00000104760	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:17910357-17910383,chr8:17915888-17915911,chr8:17915979-17915993,chr8:17916001-17916013,chr8:17916077-17916083,chr8:17916265-17916275
HERVL_8p22b	HERV	HERVL	internal	chr8	18106643	18109297	-	coding	AC124242.3	lncRNA	ANTISENSE	ENSG00000286542	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_8p22	HERV	PRIMA4	prototype	chr8	18215838	18218836	-	noncoding	NAT1	protein_coding	ANTISENSE	ENSG00000171428	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_8p22c	HERV	HERVL	internal	chr8	18311252	18312611	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NAT1	ENSG00000171428	87563	NATP	ENSG00000253937	57996	None	None
ERVLE_8p21.3a	HERV	ERVLE	internal	chr8	19806494	19812562	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CSGALNACT1	ENSG00000147408	48465	INTS10	ENSG00000104613	4829	None	None
HERVW_8p21.3	HERV	HERVW	prototype	chr8	20154739	20159633	+	coding	SLC18A1	protein_coding	ANTISENSE	ENSG00000036565	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr8:20158367-20158370
ERV316A3_8p21.3a	HERV	ERV316A3	internal	chr8	20487271	20487751	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022559.1	ENSG00000253178	63450	AC023403.1	ENSG00000253164	114502	None	None
ERV316A3_8p21.3b	HERV	ERV316A3	internal	chr8	20487797	20488677	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022559.1	ENSG00000253178	62524	AC023403.1	ENSG00000253164	115028	None	None
ERV316A3_8p21.3c	HERV	ERV316A3	oneside	chr8	20488725	20491805	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022559.1	ENSG00000253178	59396	AC023403.1	ENSG00000253164	115956	None	None
ERVLE_8p21.3b	HERV	ERVLE	internal	chr8	20563619	20565254	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018541.1	ENSG00000253300	89930	AC022559.1	ENSG00000253178	12214	None	None
ERVLE_8p21.3c	HERV	ERVLE	internal	chr8	20965640	20967666	+	noncoding	AC021613.1,AC015468.1,AC015468.2	lncRNA,lncRNA,lncRNA	ANTISENSE,SENSE,SENSE	ENSG00000254092,ENSG00000253147,ENSG00000254026	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_8p21.3	HERV	HERVL	prototype	chr8	21046318	21048372	-	noncoding	AC021613.1	lncRNA	SENSE	ENSG00000254092	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8p21.3d	HERV	ERV316A3	prototype	chr8	21063247	21068543	+	noncoding	AC021613.1	lncRNA	ANTISENSE	ENSG00000254092	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8p21.3e	HERV	ERV316A3	oneside	chr8	21281908	21288297	+	noncoding	AC021613.1	lncRNA	ANTISENSE	ENSG00000254092	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8p21.3f	HERV	ERV316A3	oneside	chr8	21513848	21516552	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GFRA2	ENSG00000168546	173846	AC021355.1	ENSG00000254334	204362	None	None
ERV316A3_8p21.3g	HERV	ERV316A3	prototype	chr8	21602749	21609595	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021355.1	ENSG00000254334	293263	GFRA2	ENSG00000168546	80803	None	None
HERVL40_8p21.3	HERV	HERVL40	internal	chr8	22264071	22266028	+	noncoding	AC105206.2	lncRNA	ANTISENSE	ENSG00000254064	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_8p21.3	HERV	MER101	internal	chr8	22479930	22483803	-	noncoding	PPP3CC,AC087854.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000120910,ENSG00000251034	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8p21.3d	HERV	ERVLE	internal	chr8	22894049	22895447	+	noncoding	PEBP4,AC037441.2	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000134020,ENSG00000253142	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8p21.3a	HERV	ERVLB4	internal	chr8	23034222	23038768	+	noncoding	TNFRSF10B	protein_coding	ANTISENSE	ENSG00000120889	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_8p21.3a	HERV	PABLA	prototype	chr8	23049150	23056094	+	noncoding	TNFRSF10B	protein_coding	ANTISENSE	ENSG00000120889	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:23055518-23055522
PABLA_8p21.3b	HERV	PABLA	internal	chr8	23240050	23243200	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC100861.1	ENSG00000246582	9124	CHMP7	ENSG00000147457	437	None	None
ERVLB4_8p21.3b	HERV	ERVLB4	internal	chr8	23336642	23337699	-	noncoding	LOXL2,AC090197.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000134013,ENSG00000253837	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML6_8p21.3	HERV	HML6	oneside	chr8	23419617	23422552	+	noncoding	LOXL2,ENTPD4	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000134013,ENSG00000197217	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV4_8p21.2	HERV	HERV4	internal	chr8	23595652	23596732	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU4-71P	ENSG00000252067	3294	SLC25A37	ENSG00000147454	20189	None	None
ERVLE_8p21.2a	HERV	ERVLE	internal	chr8	24080513	24081075	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023202.1	ENSG00000253891	87926	RNU1-148P	ENSG00000207201	3355	None	None
HARLEQUIN_8p21.2	HERV	HARLEQUIN	prototype	chr8	24235507	24242893	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023202.1	ENSG00000253891	58427	ADAM28	ENSG00000042980	51176	None	None
HML5_8p21.2	HERV	HML5	prototype	chr8	24386795	24388275	-	noncoding	AC120193.1,ADAMDEC1	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000253535,ENSG00000134028	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:24387329-24387352,chr8:24387613-24387629
ERVLE_8p21.2b	HERV	ERVLE	internal	chr8	24777308	24778089	+	noncoding	AC120193.1	lncRNA	ANTISENSE	ENSG00000253535	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8p21.2a	HERV	ERV316A3	oneside	chr8	24801681	24802697	-	noncoding	AC120193.1	lncRNA	SENSE	ENSG00000253535	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8p21.2c	HERV	ERVLE	internal	chr8	24831554	24832837	+	noncoding	AC120193.1	lncRNA	ANTISENSE	ENSG00000253535	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8p21.2	HERV	ERVLB4	prototype	chr8	25122545	25124527	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107373.1	ENSG00000253832	112768	AC073581.1	ENSG00000253670	16867	None	None
ERV316A3_8p21.2b	HERV	ERV316A3	oneside	chr8	26060078	26066891	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP258	ENSG00000199620	69989	EBF2	ENSG00000221818	14665	None	None
ERVLE_8p21.2d	HERV	ERVLE	internal	chr8	26694905	26697663	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADRA1A	ENSG00000120907	50487	DPYSL2	ENSG00000092964	36727	None	None
ERVL_8p21.2	HERV	ERVL	internal	chr8	27003326	27006133	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC067904.3	ENSG00000275115	4353	ADRA1A	ENSG00000120907	136048	None	None
HERV9_8p21.2	HERV	HERV9	oneside	chr8	27492453	27498372	-	noncoding	EPHX2	protein_coding	ANTISENSE	ENSG00000120915	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8p21.1a	HERV	ERVLB4	oneside	chr8	27660888	27662351	-	noncoding	SCARA3	protein_coding	ANTISENSE	ENSG00000168077	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr8:27660844-27661096	None
ERVLB4_8p21.1b	HERV	ERVLB4	internal	chr8	27662386	27664144	-	noncoding	SCARA3	protein_coding	ANTISENSE	ENSG00000168077	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8p21.1	HERV	ERV316A3	oneside	chr8	28230115	28231140	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021678.1	ENSG00000250516	2553	AC021678.3	ENSG00000253907	7290	None	None
ERVLB4_8p21.1c	HERV	ERVLB4	oneside	chr8	28673249	28676426	+	noncoding	EXTL3	protein_coding	SENSE	ENSG00000012232	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_8p12	HERV	HML5	internal	chr8	29315927	29319404	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KIF13B	ENSG00000197892	52803	DUSP4	ENSG00000120875	13660	chr8:29318424-29318686	None
ERVLE_8p12a	HERV	ERVLE	internal	chr8	29486736	29487964	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084026.2	ENSG00000253632	39348	AC084262.2	ENSG00000285601	126514	None	None
ERVLB4_8p12a	HERV	ERVLB4	oneside	chr8	29566955	29568758	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084026.3	ENSG00000280147	18243	AC084026.1	ENSG00000253182	2614	None	None
ERVLE_8p12b	HERV	ERVLE	internal	chr8	30053914	30056259	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SARAF	ENSG00000133872	6744	RNU6-1218P	ENSG00000239175	10006	None	None
ERVLB4_8p12b	HERV	ERVLB4	internal	chr8	30057374	30061491	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SARAF	ENSG00000133872	1512	RNU6-1218P	ENSG00000239175	13466	chr8:30057414-30057679	None
HML3_8p12	HERV	HML3	prototype	chr8	30147066	30151892	-	noncoding	LEPROTL1	protein_coding	ANTISENSE	ENSG00000104660	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8p12c	HERV	ERVLE	internal	chr8	30664256	30666863	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GSR	ENSG00000104687	11203	GTF2E2	ENSG00000197265	6020	None	None
ERVLB4_8p12c	HERV	ERVLB4	oneside	chr8	30672305	30674177	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GTF2E2	ENSG00000197265	14069	GSR	ENSG00000104687	3889	None	None
HERVE_8p12a	HERV	HERVE	oneside	chr8	30728581	30733679	+	coding	UBXN8	protein_coding	SENSE	ENSG00000104691	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8p12d	HERV	ERVLB4	internal	chr8	30940169	30943949	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008066.1	ENSG00000253793	39510	AC090281.1	ENSG00000253204	18834	None	None
ERV316A3_8p12a	HERV	ERV316A3	internal	chr8	30978133	30979880	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008066.1	ENSG00000253793	3579	AC090281.1	ENSG00000253204	56798	None	None
ERV316A3_8p12b	HERV	ERV316A3	oneside	chr8	30987942	30989511	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008066.1	ENSG00000253793	3621	PURG	ENSG00000172733	6291	None	None
ERV316A3_8p12c	HERV	ERV316A3	oneside	chr8	30989553	30991768	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008066.1	ENSG00000253793	5232	PURG	ENSG00000172733	4034	None	None
ERVLE_8p12d	HERV	ERVLE	internal	chr8	31227666	31229986	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068672.2	ENSG00000253377	45556	KCTD9P6	ENSG00000229211	6682	None	None
ERVLB4_8p12e	HERV	ERVLB4	internal	chr8	31279409	31281873	-	noncoding	AC068672.2	lncRNA	ANTISENSE	ENSG00000253377	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8p12d	HERV	ERV316A3	oneside	chr8	31348108	31350425	+	noncoding	AC068672.2	lncRNA	SENSE	ENSG00000253377	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8p12e	HERV	ERVLE	internal	chr8	31415635	31416250	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068672.1	ENSG00000253275	81173	AC068672.2	ENSG00000253377	24830	None	None
MER4B_8p12	HERV	MER4B	internal	chr8	31435555	31436866	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068672.2	ENSG00000253377	44750	AC068672.1	ENSG00000253275	60557	None	None
ERV316A3_8p12e	HERV	ERV316A3	prototype	chr8	31541928	31546982	-	noncoding	AC090816.1	lncRNA	ANTISENSE	ENSG00000287204	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER34B_8p12	HERV	MER34B	internal	chr8	32498972	32499946	-	noncoding	NRG1	protein_coding	ANTISENSE	ENSG00000157168	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8p12f	HERV	ERV316A3	internal	chr8	32951528	32953770	-	noncoding	AC090204.1	lncRNA	ANTISENSE	ENSG00000247134	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8p12g	HERV	ERV316A3	internal	chr8	33384075	33385599	+	noncoding	FUT10	protein_coding	ANTISENSE	ENSG00000172728	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8p12f	HERV	ERVLE	internal	chr8	33829959	33832626	-	noncoding	AF279873.3	lncRNA	ANTISENSE	ENSG00000253642	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8p12h	HERV	ERV316A3	oneside	chr8	33946908	33949847	+	noncoding	AF279873.3	lncRNA	SENSE	ENSG00000253642	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8p12i	HERV	ERV316A3	internal	chr8	34034527	34036168	-	noncoding	AF279873.3	lncRNA	ANTISENSE	ENSG00000253642	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_8p12	HERV	PRIMA41	oneside	chr8	34086415	34092411	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF279873.3	ENSG00000253642	47311	AC087855.2	ENSG00000254302	82475	None	None
ERVLE_8p12g	HERV	ERVLE	internal	chr8	34573666	34576301	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01288	ENSG00000254344	207727	AC090993.1	ENSG00000253108	226935	None	None
ERVLE_8p12h	HERV	ERVLE	internal	chr8	34762207	34763335	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01288	ENSG00000254344	20693	AC090993.1	ENSG00000253108	415476	None	None
HUERSP3B_8p12	HERV	HUERSP3B	oneside	chr8	34890114	34898436	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087343.1	ENSG00000243181	15481	AC099685.1	ENSG00000287152	182156	None	None
ERVLE_8p12i	HERV	ERVLE	internal	chr8	35030185	35031225	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087343.1	ENSG00000243181	155552	AC099685.1	ENSG00000287152	49367	None	None
ERVLE_8p12j	HERV	ERVLE	internal	chr8	35032894	35034133	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087343.1	ENSG00000243181	158261	AC099685.1	ENSG00000287152	46459	None	None
HERVL40_8p12	HERV	HERVL40	prototype	chr8	35921129	35927999	+	noncoding	AC124290.1	lncRNA	SENSE	ENSG00000253452	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV9_8p12	HERV	HERV9	prototype	chr8	35932066	35939361	+	noncoding	AC124290.1	lncRNA	SENSE	ENSG00000253452	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_8p12b	HERV	HERVE	prototype	chr8	35951628	35960233	+	noncoding	AC124290.1	lncRNA	SENSE	ENSG00000253452	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8p12f	HERV	ERVLB4	oneside	chr8	36107914	36114088	-	noncoding	AC124290.1	lncRNA	ANTISENSE	ENSG00000253452	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_8p12a	HERV	HERVL	oneside	chr8	36463738	36467516	-	noncoding	AC090809.1	lncRNA	SENSE	ENSG00000253363	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_8p12b	HERV	HERVL	oneside	chr8	36529591	36533355	+	noncoding	AC090809.1	lncRNA	ANTISENSE	ENSG00000253363	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_8p12	HERV	HERVL18	prototype	chr8	36573737	36576522	-	coding	AC090809.1	lncRNA	SENSE	ENSG00000253363	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8p11.23a	HERV	ERV316A3	oneside	chr8	36710316	36712611	-	noncoding	AC090809.1	lncRNA	SENSE	ENSG00000253363	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8p11.23a	HERV	ERVLB4	oneside	chr8	37116437	37118585	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SMARCE1P4	ENSG00000253650	21047	AC091182.1	ENSG00000253123	207990	None	None
ERVLE_8p11.23a	HERV	ERVLE	internal	chr8	37200874	37202357	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091182.1	ENSG00000253123	124218	SMARCE1P4	ENSG00000253650	105484	None	None
ERVLE_8p11.23b	HERV	ERVLE	internal	chr8	37433897	37435461	-	noncoding	LINC01605	lncRNA	SENSE	ENSG00000253161	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8p11.23b	HERV	ERV316A3	oneside	chr8	37569937	37570794	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC124067.4	ENSG00000254290	26686	AC124067.3	ENSG00000254111	2460	None	None
HERVH_8p11.23	HERV	HERVH	oneside	chr8	38000669	38004122	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EIF4EBP1	ENSG00000187840	26412	RPL12P48	ENSG00000270865	17296	None	None
MER4_8p11.23	HERV	MER4	oneside	chr8	38014366	38019343	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL12P48	ENSG00000270865	30993	EIF4EBP1	ENSG00000187840	11191	None	None
LTR57_8p11.23	HERV	LTR57	internal	chr8	38016045	38016892	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL12P48	ENSG00000270865	32672	EIF4EBP1	ENSG00000187840	13642	None	None
ERVLB4_8p11.23b	HERV	ERVLB4	prototype	chr8	38223631	38227277	-	noncoding	AC084024.4,DDHD2	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000285632,ENSG00000085788	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_8p11.22	HERV	MER41	oneside	chr8	39004567	39006262	-	noncoding	ADAM9	protein_coding	ANTISENSE	ENSG00000168615	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr8:39004650-39004869	None
ERVLB4_8p11.22a	HERV	ERVLB4	prototype	chr8	39057485	39064595	-	noncoding	ADAM9	protein_coding	ANTISENSE	ENSG00000168615	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8p11.22a	HERV	ERVLE	internal	chr8	39113325	39114678	-	noncoding	ADAM32	protein_coding	ANTISENSE	ENSG00000197140	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8p11.22b	HERV	ERVLE	internal	chr8	39183557	39185735	-	noncoding	ADAM32	protein_coding	ANTISENSE	ENSG00000197140	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_8p11.22	HERV	HUERSP3	oneside	chr8	39326061	39330601	-	noncoding	ADAM5	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000196115	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8p11.22a	HERV	ERV316A3	oneside	chr8	39427651	39429431	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADAM5	ENSG00000196115	10273	ADAM3A	ENSG00000197475	21614	None	None
HUERSP2_8p11.22	HERV	HUERSP2	prototype	chr8	39446961	39450933	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADAM5	ENSG00000196115	29583	ADAM3A	ENSG00000197475	112	None	None
PRIMA4_8p11.22	HERV	PRIMA4	internal	chr8	39481097	39487156	+	noncoding	ADAM3A	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000197475	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8p11.22b	HERV	ERV316A3	oneside	chr8	39670778	39673033	+	noncoding	ADAM18	protein_coding	SENSE	ENSG00000168619	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8p11.22c	HERV	ERV316A3	prototype	chr8	39774888	39776449	-	noncoding	ADAM2	protein_coding	SENSE	ENSG00000104755	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8p11.22b	HERV	ERVLB4	oneside	chr8	39819442	39820650	+	noncoding	ADAM2	protein_coding	ANTISENSE	ENSG00000104755	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_8p11.22	HERV	HERVIP10F	oneside	chr8	39848200	39853109	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005902.2	ENSG00000253332	7110	ADAM2	ENSG00000104755	9911	None	chr8:39852703-39852710
HML3_8p11.22	HERV	HML3	prototype	chr8	39870385	39876006	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005902.1	ENSG00000253233	2573	IDO1	ENSG00000131203	26269	None	None
HERV9_8p11.22	HERV	HERV9	prototype	chr8	39876007	39885741	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	IDO1	ENSG00000131203	16534	AP005902.1	ENSG00000253233	8195	None	None
ERVLB4_8p11.21a	HERV	ERVLB4	internal	chr8	40052608	40053194	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087518.1	ENSG00000253381	50975	IDO2	ENSG00000188676	36217	None	None
ERVLB4_8p11.21b	HERV	ERVLB4	internal	chr8	41102306	41103412	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-356P	ENSG00000206867	69308	SFRP1	ENSG00000104332	158550	None	None
ERVLE_8p11.21a	HERV	ERVLE	oneside	chr8	41211009	41212513	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-356P	ENSG00000206867	178011	SFRP1	ENSG00000104332	49449	None	None
ERVLE_8p11.21b	HERV	ERVLE	oneside	chr8	41215556	41221177	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-356P	ENSG00000206867	182558	SFRP1	ENSG00000104332	40785	None	None
ERV316A3_8p11.21	HERV	ERV316A3	internal	chr8	41416063	41417950	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SFRP1	ENSG00000104332	106590	SNORD65B	ENSG00000238936	8705	None	None
ERVL_8p11.21a	HERV	ERVL	oneside	chr8	41431638	41434046	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SNORD65B	ENSG00000238936	4911	AC016868.1	ENSG00000253396	1252	None	None
HERVEA_8p11.21	HERV	HERVEA	oneside	chr8	41590939	41593548	-	noncoding	GPAT4	protein_coding	ANTISENSE	ENSG00000158669	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr8:41590614-41590942	None
HARLEQUIN_8p11.21	HERV	HARLEQUIN	oneside	chr8	41593545	41597227	-	noncoding	GPAT4	protein_coding	ANTISENSE	ENSG00000158669	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_8p11.21	HERV	MER34B	oneside	chr8	41812198	41817154	-	coding	ANK1	protein_coding	SENSE	ENSG00000029534	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8p11.21c	HERV	ERVLE	internal	chr8	42066407	42068326	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC103724.1	ENSG00000244235	32992	KAT6A	ENSG00000083168	14413	None	None
HERV9_8p11.21	HERV	HERV9	prototype	chr8	42559708	42568450	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CHRNB3	ENSG00000147432	128916	SMIM19	ENSG00000176209	4515	None	None
ERVL_8p11.21b	HERV	ERVL	internal	chr8	42823060	42823839	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	THAP1	ENSG00000131931	12835	CHRNA6	ENSG00000147434	26668	None	None
MER41_8p11.21	HERV	MER41	internal	chr8	43106829	43110635	-	noncoding	POMK	protein_coding	ANTISENSE	ENSG00000185900	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_8p11.21	HERV	MER61	prototype	chr8	43134411	43139620	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113191.1	ENSG00000254198	8014	HGSNAT	ENSG00000165102	844	None	None
MER4_8p11.1a	HERV	MER4	internal	chr8	43367916	43370097	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	POTEA	ENSG00000188877	4398	AC022616.7	ENSG00000254342	2462	None	None
MER4_8p11.1b	HERV	MER4	internal	chr8	43372801	43373738	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022616.7	ENSG00000254342	124	AC022616.1	ENSG00000201329	4559	chr8:43373391-43373465	None
HUERSP3_8p11.1a	HERV	HUERSP3	oneside	chr8	43429898	43432368	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022616.1	ENSG00000201329	51388	AC134698.1	ENSG00000250637	10534	None	None
HUERSP3_8p11.1b	HERV	HUERSP3	oneside	chr8	43434884	43439997	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022616.1	ENSG00000201329	56374	AC134698.1	ENSG00000250637	2905	None	None
HERVS71_8p11.1	HERV	HERVS71	prototype	chr8	43551325	43561237	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC139365.2	ENSG00000253845	111586	AC134698.2	ENSG00000253195	7268	None	None
HERVK14C_8p11.1a	HERV	HERVK14C	oneside	chr8	43694019	43697502	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC118650.1	ENSG00000276685	2331302	AC139365.1	ENSG00000253198	19428	None	None
HERVK14C_8p11.1b	HERV	HERVK14C	oneside	chr8	43697571	43702581	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC118650.1	ENSG00000276685	2326223	AC139365.1	ENSG00000253198	22980	None	None
HERVK14C_8p11.1c	HERV	HERVK14C	oneside	chr8	43882490	43886791	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC118650.1	ENSG00000276685	2142013	AC139365.1	ENSG00000253198	207899	None	None
HERVK11_8p11.1	HERV	HERVK11	prototype	chr8	43892563	43899365	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC139365.1	ENSG00000253198	217972	AC118650.1	ENSG00000276685	2129439	None	None
HERV3_8q11.1	HERV	HERV3	prototype	chr8	46123757	46127238	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC118650.1	ENSG00000276685	94865	HSPA8P13	ENSG00000253425	421851	chr8:46125771-46125903	None
HML2_8q11.1a	HERV	HML2	oneside	chr8	46264028	46267723	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HSPA8P13	ENSG00000253425	281366	AC118650.1	ENSG00000276685	235136	None	None
HML2_8q11.1b	HERV	HML2	oneside	chr8	46267760	46272039	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HSPA8P13	ENSG00000253425	277050	AC118650.1	ENSG00000276685	238868	None	None
HML3_8q11.1a	HERV	HML3	prototype	chr8	46278044	46285064	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC118650.1	ENSG00000276685	249152	HSPA8P13	ENSG00000253425	264025	None	None
HML6_8q11.1	HERV	HML6	prototype	chr8	46483549	46491378	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSPA8P13	ENSG00000253425	57711	AC118650.1	ENSG00000276685	454657	None	None
HERVK11_8q11.1	HERV	HERVK11	prototype	chr8	46580301	46590041	+	noncoding	ASNSP1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000248498	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_8q11.1	HERV	HML5	prototype	chr8	46651488	46656701	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ASNSP1	ENSG00000248498	12602	AC104576.1	ENSG00000254070	15138	None	None
MER61_8q11.1	HERV	MER61	prototype	chr8	46805567	46811035	-	noncoding	AC021451.2	lncRNA	SENSE	ENSG00000286484	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_8q11.1b	HERV	HML3	prototype	chr8	46876536	46881278	+	noncoding	LINC00293	lncRNA	SENSE	ENSG00000253314	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_8q11.1	HERV	HUERSP3	oneside	chr8	47005340	47015327	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP32	ENSG00000222099	52694	MAPK6P4	ENSG00000215179	30723	None	chr8:47015046-47015051
MER4B_8q11.1	HERV	MER4B	internal	chr8	47074133	47075514	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC120036.1	ENSG00000248347	14058	RN7SKP32	ENSG00000222099	5810	None	None
ERVLE_8q11.21a	HERV	ERVLE	internal	chr8	47506952	47508682	-	noncoding	SPIDR	protein_coding	ANTISENSE	ENSG00000164808	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH21_8q11.21	HERV	HERVFH21	prototype	chr8	47988989	47999250	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2V2	ENSG00000169139	9165	RNU6-519P	ENSG00000222522	9468	chr8:47990891-47991183,chr8:47998018-47998274	chr8:47992940-47992945,chr8:47997429-47997458,chr8:47998865-47998868,chr8:47998926-47998935,chr8:47998229-47998238
HUERSP3B_8q11.21	HERV	HUERSP3B	internal	chr8	48225542	48232825	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104989.1	ENSG00000253843	30915	AC105029.1	ENSG00000253654	61201	None	None
HERVW_8q11.21	HERV	HERVW	oneside	chr8	48235942	48239387	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105029.1	ENSG00000253654	54639	AC104989.1	ENSG00000253843	41315	None	None
HUERSP3_8q11.21	HERV	HUERSP3	oneside	chr8	48242754	48244436	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104989.1	ENSG00000253843	48127	AC105029.1	ENSG00000253654	49590	None	None
HML3_8q11.21a	HERV	HML3	prototype	chr8	48244515	48250517	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105029.1	ENSG00000253654	43509	AC104989.1	ENSG00000253843	49888	None	None
ERVLB4_8q11.21a	HERV	ERVLB4	oneside	chr8	48528076	48529155	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026904.1	ENSG00000253140	9919	AC026904.2	ENSG00000253688	22372	None	None
HML3_8q11.21b	HERV	HML3	prototype	chr8	48962289	48968004	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC013701.2	ENSG00000287788	31001	AC044893.2	ENSG00000286701	78648	None	None
HERVIP10F_8q11.21	HERV	HERVIP10F	prototype	chr8	49094494	49104406	+	coding	AC044893.1	lncRNA	SENSE	ENSG00000253474	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q11.21a	HERV	ERV316A3	oneside	chr8	49160321	49162766	-	noncoding	AC044893.1	lncRNA	ANTISENSE	ENSG00000253474	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q11.21b	HERV	ERVLB4	internal	chr8	49238145	49239905	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC044893.1	ENSG00000253474	8971	RN7SKP294	ENSG00000199640	90305	None	None
HERVH_8q11.21	HERV	HERVH	prototype	chr8	49419793	49426326	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RFPL4AP7	ENSG00000254268	66949	AC090155.2	ENSG00000253380	70437	None	None
HERV9_8q11.21a	HERV	HERV9	prototype	chr8	49426632	49435851	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RFPL4AP7	ENSG00000254268	73788	AC090155.2	ENSG00000253380	60912	None	None
ERVLE_8q11.21b	HERV	ERVLE	oneside	chr8	49483636	49486584	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RFPL4AP7	ENSG00000254268	130792	AC090155.2	ENSG00000253380	10179	None	None
ERV316A3_8q11.21b	HERV	ERV316A3	prototype	chr8	49593677	49599366	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090155.1	ENSG00000253206	39263	PSAT1P1	ENSG00000253810	140850	None	None
ERVLB4_8q11.21c	HERV	ERVLB4	oneside	chr8	49779479	49781804	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSAT1P1	ENSG00000253810	38158	AC113145.1	ENSG00000253484	35782	None	None
ERVLB4_8q11.21d	HERV	ERVLB4	internal	chr8	49785007	49790509	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSAT1P1	ENSG00000253810	43686	AC113145.1	ENSG00000253484	27077	None	None
ERVL_8q11.21a	HERV	ERVL	oneside	chr8	49791269	49794652	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSAT1P1	ENSG00000253810	49948	AC113145.1	ENSG00000253484	22934	None	None
ERVLB4_8q11.21e	HERV	ERVLB4	internal	chr8	50187644	50189176	-	noncoding	SNTG1	protein_coding	ANTISENSE	ENSG00000147481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_8q11.21b	HERV	ERVL	internal	chr8	50369847	50371048	+	noncoding	SNTG1	protein_coding	SENSE	ENSG00000147481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q11.21f	HERV	ERVLB4	prototype	chr8	50382735	50388876	-	noncoding	SNTG1	protein_coding	ANTISENSE	ENSG00000147481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_8q11.21	HERV	HERVL40	oneside	chr8	50632841	50634365	+	noncoding	SNTG1	protein_coding	SENSE	ENSG00000147481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q11.21c	HERV	ERV316A3	oneside	chr8	50727886	50729870	-	noncoding	SNTG1	protein_coding	ANTISENSE	ENSG00000147481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_8q11.21	HERV	MER61	prototype	chr8	50804221	50809479	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SNTG1	ENSG00000147481	7529	AC087272.1	ENSG00000253340	50051	None	None
ERVLE_8q11.21c	HERV	ERVLE	internal	chr8	50913154	50915120	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087272.1	ENSG00000253340	53092	AC090919.1	ENSG00000201316	99901	None	None
ERV316A3_8q11.21d	HERV	ERV316A3	internal	chr8	50949175	50950867	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087272.1	ENSG00000253340	89113	AC090919.1	ENSG00000201316	64154	None	None
ERVLE_8q11.21d	HERV	ERVLE	internal	chr8	50970873	50971427	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087272.1	ENSG00000253340	110811	AC090919.1	ENSG00000201316	43594	None	None
ERVLE_8q11.21e	HERV	ERVLE	internal	chr8	51111375	51112429	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090919.1	ENSG00000201316	96210	AC012413.1	ENSG00000253664	145259	None	None
ERVLE_8q11.21f	HERV	ERVLE	internal	chr8	51139221	51141556	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012413.1	ENSG00000253664	116132	AC090919.1	ENSG00000201316	124056	None	None
HERVL_8q11.21	HERV	HERVL	oneside	chr8	51267511	51269038	-	noncoding	AC012413.1	lncRNA	ANTISENSE	ENSG00000253664	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_8q11.21b	HERV	HERV9	prototype	chr8	51288755	51299578	-	noncoding	AC012413.1	lncRNA	ANTISENSE	ENSG00000253664	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q11.23a	HERV	ERVLE	internal	chr8	52001007	52001684	-	noncoding	AC064807.2,AC064807.3	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000253844,ENSG00000254136	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q11.23a	HERV	ERV316A3	oneside	chr8	52189105	52193580	+	noncoding	ST18	protein_coding	ANTISENSE	ENSG00000147488	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q11.23b	HERV	ERV316A3	oneside	chr8	52312420	52314222	+	noncoding	ST18,RPL34P17	protein_coding,processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000147488,ENSG00000240534	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_8q11.23a	HERV	HERVL	oneside	chr8	52527895	52531297	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ST18	ENSG00000147488	66936	ALKAL1	ENSG00000196711	2740	None	None
HERVL_8q11.23b	HERV	HERVL	prototype	chr8	52568065	52571470	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RB1CC1	ENSG00000023287	50988	ALKAL1	ENSG00000196711	2635	None	None
MER41_8q11.23a	HERV	MER41	internal	chr8	52599733	52604827	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ALKAL1	ENSG00000196711	34303	RB1CC1	ENSG00000023287	17631	None	None
ERVLE_8q11.23b	HERV	ERVLE	internal	chr8	52650632	52654006	+	noncoding	RB1CC1	protein_coding	ANTISENSE	ENSG00000023287	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_8q11.23	HERV	LTR57	prototype	chr8	52760049	52766332	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RB1CC1	ENSG00000023287	14206	NPBWR1	ENSG00000183729	172099	None	chr8:52760780-52760786
ERV316A3_8q11.23c	HERV	ERV316A3	internal	chr8	52835420	52836954	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RB1CC1	ENSG00000023287	89577	NPBWR1	ENSG00000183729	101477	None	None
MER41_8q11.23b	HERV	MER41	internal	chr8	52881004	52881746	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPBWR1	ENSG00000183729	56685	RB1CC1	ENSG00000023287	135161	None	None
HML3_8q11.23a	HERV	HML3	prototype	chr8	52979863	52984068	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009646.1	ENSG00000250494	178271	AC009800.1	ENSG00000248911	3747	None	None
HERVL40_8q11.23a	HERV	HERVL40	internal	chr8	53099857	53101822	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009646.1	ENSG00000250494	60517	AC009800.1	ENSG00000248911	123741	None	None
HERV9_8q11.23a	HERV	HERV9	prototype	chr8	53136318	53143640	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009646.1	ENSG00000250494	18699	AC009800.1	ENSG00000248911	160202	None	None
MER61_8q11.23a	HERV	MER61	oneside	chr8	53344424	53348184	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OPRK1	ENSG00000082556	92727	AC131902.1	ENSG00000260484	40517	None	None
PABLA_8q11.23	HERV	PABLA	internal	chr8	53348448	53352761	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC131902.1	ENSG00000260484	35940	OPRK1	ENSG00000082556	96751	None	None
HARLEQUIN_8q11.23a	HERV	HARLEQUIN	oneside	chr8	53367143	53369009	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC131902.1	ENSG00000260484	19692	OPRK1	ENSG00000082556	115446	None	None
HARLEQUIN_8q11.23b	HERV	HARLEQUIN	oneside	chr8	53375154	53379815	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC131902.1	ENSG00000260484	8886	OPRK1	ENSG00000082556	123457	None	None
MER61_8q11.23b	HERV	MER61	oneside	chr8	53412292	53414645	-	noncoding	AC022034.3	lncRNA	SENSE	ENSG00000253369	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_8q11.23b	HERV	HERV9	prototype	chr8	53459343	53469199	+	noncoding	AC022034.3	lncRNA	ANTISENSE	ENSG00000253369	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_8q11.23	HERV	HERVL18	prototype	chr8	53482820	53488834	+	noncoding	AC022034.3	lncRNA	ANTISENSE	ENSG00000253369	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr8:53483679-53484195	chr8:53483949-53483990
HERV3_8q11.23	HERV	HERV3	internal	chr8	53520479	53524714	-	noncoding	AC022034.1	lncRNA	SENSE	ENSG00000237807	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:53523845-53523872,chr8:53523948-53523981
HERVEA_8q11.23a	HERV	HERVEA	oneside	chr8	53523217	53525671	-	noncoding	AC022034.1	lncRNA	SENSE	ENSG00000237807	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:53523845-53523872,chr8:53523948-53523981
ERVLE_8q11.23c	HERV	ERVLE	internal	chr8	53597940	53600482	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAPK6P1	ENSG00000206144	57640	AC103778.1	ENSG00000253668	112215	None	None
HML3_8q11.23b	HERV	HML3	prototype	chr8	53617072	53624085	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MAPK6P1	ENSG00000206144	76772	AC103778.1	ENSG00000253668	88612	None	None
HERVEA_8q11.23b	HERV	HERVEA	prototype	chr8	53731284	53737226	+	coding	ATP6V1H	protein_coding	ANTISENSE	ENSG00000047249	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_8q11.23c	HERV	HML3	oneside	chr8	54074261	54077013	+	noncoding	LYPLA1	protein_coding	ANTISENSE	ENSG00000120992	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_8q11.23b	HERV	HERVL40	oneside	chr8	54183988	54189099	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6ATAC32P	ENSG00000251835	31106	AC060764.1	ENSG00000270980	2483	None	None
ERV316A3_8q12.1a	HERV	ERV316A3	prototype	chr8	54952787	54958591	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084834.1	ENSG00000286348	108994	RP1	ENSG00000104237	81067	None	None
HARLEQUIN_8q12.1a	HERV	HARLEQUIN	prototype	chr8	55706083	55716049	+	coding	TMEM68	protein_coding	ANTISENSE	ENSG00000167904	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr8:55706433-55706439,chr8:55713342-55713354
MER41_8q12.1a	HERV	MER41	oneside	chr8	55723558	55729046	-	noncoding	TMEM68	protein_coding	SENSE	ENSG00000167904	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
MER41_8q12.1b	HERV	MER41	oneside	chr8	55729095	55732243	-	noncoding	TMEM68	protein_coding	SENSE	ENSG00000167904	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q12.1a	HERV	ERVLB4	oneside	chr8	56140391	56143961	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PLAG1	ENSG00000181690	16948	AC107376.1	ENSG00000221093	19039	None	None
MER4_8q12.1a	HERV	MER4	oneside	chr8	56364987	56368316	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SDR16C6P	ENSG00000253542	4748	SDR16C5	ENSG00000170786	44211	None	None
MER4_8q12.1b	HERV	MER4	internal	chr8	56368454	56370698	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SDR16C6P	ENSG00000253542	2366	SDR16C5	ENSG00000170786	47678	None	None
MER34B_8q12.1	HERV	MER34B	internal	chr8	56639313	56641906	-	noncoding	AC009597.1	lncRNA	SENSE	ENSG00000254055	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q12.1a	HERV	ERVLE	oneside	chr8	56661562	56663011	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009597.2	ENSG00000270328	113272	AC009597.1	ENSG00000254055	5066	None	None
ERVLE_8q12.1b	HERV	ERVLE	oneside	chr8	56941300	56942994	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-13P	ENSG00000206975	24110	IMPAD1	ENSG00000104331	14937	None	None
HERVFRD_8q12.1a	HERV	HERVFRD	oneside	chr8	57202513	57203980	-	noncoding	LINC01606	lncRNA	ANTISENSE	ENSG00000253301	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_8q12.1b	HERV	HERVFRD	oneside	chr8	57209256	57210965	-	noncoding	LINC01606	lncRNA	ANTISENSE	ENSG00000253301	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr8:57210162-57210466	None
HERVFRD_8q12.1c	HERV	HERVFRD	oneside	chr8	57213635	57215085	-	noncoding	LINC01606	lncRNA	ANTISENSE	ENSG00000253301	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_8q12.1d	HERV	HERVFRD	unknown	chr8	57219004	57222203	-	noncoding	LINC01606	lncRNA	ANTISENSE	ENSG00000253301	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_8q12.1	HERV	HUERSP3	oneside	chr8	57222400	57224779	-	noncoding	LINC01606	lncRNA	ANTISENSE	ENSG00000253301	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_8q12.1e	HERV	HERVFRD	oneside	chr8	57297414	57299663	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068075.1	ENSG00000253871	41358	RNU6-596P	ENSG00000202265	7765	None	None
HERVFRD_8q12.1f	HERV	HERVFRD	prototype	chr8	57366532	57372856	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068075.1	ENSG00000253871	1088	RPL30P10	ENSG00000243050	19690	None	None
PRIMA41_8q12.1	HERV	PRIMA41	internal	chr8	57416491	57418887	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068075.2	ENSG00000287301	1947	RPL30P10	ENSG00000243050	23609	None	None
HML5_8q12.1	HERV	HML5	oneside	chr8	57456154	57462062	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068075.2	ENSG00000287301	32481	AC090796.1	ENSG00000253821	30822	None	None
HML6_8q12.1	HERV	HML6	unknown	chr8	57463755	57466172	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068075.2	ENSG00000287301	40082	AC090796.1	ENSG00000253821	26712	None	None
ERVLE_8q12.1c	HERV	ERVLE	internal	chr8	57572139	57574380	-	noncoding	AC090796.1	lncRNA	ANTISENSE	ENSG00000253821	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q12.1d	HERV	ERVLE	internal	chr8	57808912	57810842	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01602	ENSG00000205293	44658	AC104051.1	ENSG00000253322	3883	None	None
ERVLB4_8q12.1b	HERV	ERVLB4	oneside	chr8	57973730	57975914	-	noncoding	LINC01602	lncRNA	ANTISENSE	ENSG00000205293	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q12.1b	HERV	ERV316A3	oneside	chr8	58224847	58226053	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092819.3	ENSG00000288041	1525	FAM110B	ENSG00000169122	20568	None	None
HERVL32_8q12.1	HERV	HERVL32	oneside	chr8	58533573	58535735	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SDCBP	ENSG00000137575	17189	PPIAP85	ENSG00000254103	29505	None	None
HARLEQUIN_8q12.1b	HERV	HARLEQUIN	oneside	chr8	58692137	58698872	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NSMAF	ENSG00000035681	32284	TOX	ENSG00000198846	106540	None	None
ERVLB4_8q12.1c	HERV	ERVLB4	internal	chr8	59158895	59159946	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087698.1	ENSG00000206853	21393	RNA5SP267	ENSG00000201763	295939	None	None
ERVLE_8q12.1e	HERV	ERVLE	internal	chr8	59359094	59359591	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087698.1	ENSG00000206853	221592	RNA5SP267	ENSG00000201763	96294	None	None
MER4_8q12.1c	HERV	MER4	oneside	chr8	60300150	60304059	-	noncoding	LINC01301	lncRNA	SENSE	ENSG00000251396	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_8q12.1d	HERV	MER4	internal	chr8	60304301	60305379	-	noncoding	LINC01301	lncRNA	SENSE	ENSG00000251396	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_8q12.1	HERV	HERVH	prototype	chr8	60305380	60312009	-	noncoding	LINC01301	lncRNA	SENSE	ENSG00000251396	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q12.1c	HERV	ERV316A3	internal	chr8	60330628	60331153	-	noncoding	LINC01301	lncRNA	SENSE	ENSG00000251396	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_8q12.1	HERV	HERVW	prototype	chr8	60419414	60425519	-	coding	LINC01301	lncRNA	SENSE	ENSG00000251396	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_8q12.1	HERV	HML1	prototype	chr8	60493462	60499918	+	coding	LINC01301	lncRNA	ANTISENSE	ENSG00000251396	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr8:60493936-60493940
ERVLE_8q12.2	HERV	ERVLE	internal	chr8	60886194	60890595	-	noncoding	AC113143.3	lncRNA	ANTISENSE	ENSG00000287975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q12.2	HERV	ERV316A3	oneside	chr8	61042797	61048905	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022182.2	ENSG00000254802	75022	CLVS1	ENSG00000177182	8253	None	None
ERVLE_8q12.3a	HERV	ERVLE	internal	chr8	61803988	61807137	-	noncoding	LINC02842	lncRNA	ANTISENSE	ENSG00000254119	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q12.3a	HERV	ERVLB4	prototype	chr8	61817711	61825012	-	noncoding	LINC02842,AC025524.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000254119,ENSG00000253834	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_8q12.3	HERV	HERVFRD	oneside	chr8	61899275	61903380	-	noncoding	LINC02842	lncRNA	ANTISENSE	ENSG00000254119	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_8q12.3	HERV	HUERSP3	oneside	chr8	62099706	62102544	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NARS1P2	ENSG00000253789	7980	LINC02842	ENSG00000254119	155526	None	None
ERVLB4_8q12.3b	HERV	ERVLB4	internal	chr8	62128334	62129013	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104852.1	ENSG00000237810	14298	NARS1P2	ENSG00000253789	8436	None	None
ERVLE_8q12.3b	HERV	ERVLE	internal	chr8	62208838	62209433	+	noncoding	AC023095.1	lncRNA	ANTISENSE	ENSG00000285971	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q12.3c	HERV	ERVLE	internal	chr8	62214364	62215562	+	noncoding	AC023095.1	lncRNA	ANTISENSE	ENSG00000285971	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q12.3a	HERV	ERV316A3	internal	chr8	62418411	62420057	-	noncoding	NKAIN3	protein_coding	ANTISENSE	ENSG00000185942	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_8q12.3a	HERV	HERVW	oneside	chr8	62595401	62597370	-	coding	NKAIN3	protein_coding	ANTISENSE	ENSG00000185942	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q12.3d	HERV	ERVLE	internal	chr8	63093665	63096052	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011978.1	ENSG00000253555	40171	TTPA	ENSG00000137561	7612	None	None
MER61_8q12.3a	HERV	MER61	unknown	chr8	63096517	63100529	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTPA	ENSG00000137561	10464	AC011978.1	ENSG00000253555	35694	None	None
HERVH48_8q12.3	HERV	HERVH48	prototype	chr8	63143887	63147246	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	YTHDF3-AS1	ENSG00000270673	20479	AC011978.1	ENSG00000253555	5803	None	chr8:63146981-63146988
HERVH_8q12.3	HERV	HERVH	oneside	chr8	63147339	63153264	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	YTHDF3-AS1	ENSG00000270673	14461	AC011978.1	ENSG00000253555	9255	None	None
HERVL40_8q12.3	HERV	HERVL40	internal	chr8	63229650	63232129	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011978.2	ENSG00000261542	11616	RN7SL135P	ENSG00000241964	2505	None	None
HERVL_8q12.3a	HERV	HERVL	internal	chr8	63318751	63322088	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL135P	ENSG00000241964	83840	AC011124.1	ENSG00000253205	62751	None	None
HUERSP2_8q12.3	HERV	HUERSP2	prototype	chr8	63322097	63326756	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL135P	ENSG00000241964	87186	AC011124.1	ENSG00000253205	58083	None	None
HERVL_8q12.3b	HERV	HERVL	oneside	chr8	63326757	63328797	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL135P	ENSG00000241964	91846	AC011124.1	ENSG00000253205	56042	None	None
ERV316A3_8q12.3b	HERV	ERV316A3	oneside	chr8	63427158	63428972	-	noncoding	AC011124.1	lncRNA	SENSE	ENSG00000253205	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q12.3c	HERV	ERV316A3	oneside	chr8	63431555	63432372	-	noncoding	AC011124.1	lncRNA	SENSE	ENSG00000253205	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_8q12.3b	HERV	MER61	internal	chr8	63560893	63561606	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018953.1	ENSG00000253583	24394	AC011124.2	ENSG00000253894	82148	None	None
HERVL_8q12.3c	HERV	HERVL	oneside	chr8	63920510	63926344	+	noncoding	LINC01414	lncRNA	ANTISENSE	ENSG00000253554	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_8q12.3d	HERV	HERVL	prototype	chr8	64121221	64127799	-	noncoding	LINC01414	lncRNA	SENSE	ENSG00000253554	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q12.3e	HERV	ERVLE	internal	chr8	64509760	64510943	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012535.1	ENSG00000287615	46834	AC090136.1	ENSG00000253750	43293	None	None
HERVIP10FH_8q12.3	HERV	HERVIP10FH	internal	chr8	64763461	64765348	+	noncoding	CYP7B1	protein_coding	ANTISENSE	ENSG00000172817	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_8q12.3b	HERV	HERVW	oneside	chr8	64765352	64768361	+	noncoding	CYP7B1	protein_coding	ANTISENSE	ENSG00000172817	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q12.3f	HERV	ERVLE	internal	chr8	64811247	64815461	-	noncoding	AC104232.3,AC104232.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000287998,ENSG00000254006	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q12.3c	HERV	ERVLB4	prototype	chr8	64898313	64903051	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104232.3	ENSG00000287998	35943	AC087808.1	ENSG00000253493	70437	None	None
ERVLB4_8q13.1	HERV	ERVLB4	internal	chr8	65105514	65106245	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL31P41	ENSG00000239261	49162	AC087808.1	ENSG00000253493	131666	None	None
ERVLE_8q13.1a	HERV	ERVLE	internal	chr8	65106247	65107211	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087808.1	ENSG00000253493	132399	RPL31P41	ENSG00000239261	48196	None	None
HERVIP10FH_8q13.1	HERV	HERVIP10FH	prototype	chr8	65126667	65133492	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL31P41	ENSG00000239261	21915	AC087808.1	ENSG00000253493	152819	None	None
HERVH48_8q13.1	HERV	HERVH48	prototype	chr8	65863235	65870470	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC100812.1	ENSG00000272192	19904	DNAJC5B	ENSG00000147570	151083	None	None
ERV316A3_8q13.1a	HERV	ERV316A3	internal	chr8	65908704	65910139	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DNAJC5B	ENSG00000147570	111414	AC100812.1	ENSG00000272192	65373	None	None
ERV316A3_8q13.1b	HERV	ERV316A3	prototype	chr8	66220664	66224286	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009879.4	ENSG00000287127	139488	LINC00967	ENSG00000253138	23349	None	None
LTR46_8q13.1	HERV	LTR46	oneside	chr8	66326680	66327971	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00967	ENSG00000253138	129365	AC009879.4	ENSG00000287127	35803	None	chr8:66327544-66327551,chr8:66327611-66327615,chr8:66327618-66327627
ERVLE_8q13.1b	HERV	ERVLE	internal	chr8	66787449	66788616	-	noncoding	SGK3	protein_coding	ANTISENSE	ENSG00000104205	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr8:66787551-66787849	chr8:66787745-66787765,chr8:66787551-66787566
ERVLE_8q13.1c	HERV	ERVLE	internal	chr8	66788691	66789766	-	noncoding	SGK3	protein_coding	ANTISENSE	ENSG00000104205	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q13.2	HERV	ERVLB4	internal	chr8	67693824	67696110	+	noncoding	CPA6	protein_coding	ANTISENSE	ENSG00000165078	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_8q13.2	HERV	HERVFRD	prototype	chr8	67702374	67709490	+	noncoding	CPA6	protein_coding	ANTISENSE	ENSG00000165078	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_8q13.2	HERV	MER4	oneside	chr8	67842639	67846022	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CPA6	ENSG00000165078	96261	NDUFS5P6	ENSG00000255531	3022	None	None
HERVW_8q13.2	HERV	HERVW	oneside	chr8	67921963	67923631	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFS5P6	ENSG00000255531	72625	PREX2	ENSG00000046889	28415	None	None
ERV316A3_8q13.2a	HERV	ERV316A3	oneside	chr8	68149943	68151587	-	noncoding	PREX2	protein_coding	ANTISENSE	ENSG00000046889	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q13.2a	HERV	ERVLE	internal	chr8	68369122	68372080	-	noncoding	C8orf34	protein_coding	ANTISENSE	ENSG00000165084	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_8q13.2a	HERV	MER61	prototype	chr8	68508799	68514352	-	noncoding	C8orf34	protein_coding	ANTISENSE	ENSG00000165084	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_8q13.2b	HERV	MER61	internal	chr8	68659522	68660736	-	noncoding	C8orf34	protein_coding	ANTISENSE	ENSG00000165084	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_8q13.2	HERV	HML3	prototype	chr8	68888678	68895627	+	noncoding	LINC01592	lncRNA	ANTISENSE	ENSG00000253658	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_8q13.2	HERV	HERVH	prototype	chr8	68972944	68978769	+	noncoding	LINC01592	lncRNA	ANTISENSE	ENSG00000253658	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q13.2b	HERV	ERV316A3	oneside	chr8	69057748	69058693	-	noncoding	LINC01592	lncRNA	SENSE	ENSG00000253658	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q13.2c	HERV	ERV316A3	internal	chr8	69209152	69210935	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01603	ENSG00000253479	213914	AC021785.1	ENSG00000253373	30963	None	None
ERVLE_8q13.2b	HERV	ERVLE	internal	chr8	69425871	69426807	-	noncoding	LINC01603	lncRNA	SENSE	ENSG00000253479	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q13.3a	HERV	ERV316A3	oneside	chr8	70099953	70104701	-	coding	H2AZP2	processed_pseudogene	SENSE	ENSG00000253173	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:70104267-70104271
ERVLB4_8q13.3	HERV	ERVLB4	oneside	chr8	70415974	70418441	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022730.2	ENSG00000241204	5684	NCOA2	ENSG00000140396	12166	None	None
HUERSP1_8q13.3	HERV	HUERSP1	prototype	chr8	70727698	70732687	-	noncoding	XKR9,AC015687.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000221947,ENSG00000285579	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_8q13.3a	HERV	HERVH	prototype	chr8	71664665	71670448	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EYA1	ENSG00000104313	72640	AC009446.1	ENSG00000254277	4852	None	None
HERVH_8q13.3b	HERV	HERVH	prototype	chr8	71674937	71680660	+	noncoding	AC009446.1	lncRNA	SENSE	ENSG00000254277	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:71675351-71675356
ERV316A3_8q13.3b	HERV	ERV316A3	oneside	chr8	71953866	71955118	+	noncoding	MSC-AS1	lncRNA	SENSE	ENSG00000235531	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PABLB_8q21.11	HERV	PABLB	prototype	chr8	72096360	72104776	-	noncoding	MSC-AS1	lncRNA	ANTISENSE	ENSG00000235531	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH21_8q21.11	HERV	HERVFH21	oneside	chr8	72133051	72134652	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC078906.1	ENSG00000253317	61682	MSC-AS1	ENSG00000235531	14658	None	None
HERVL_8q21.11	HERV	HERVL	internal	chr8	72177226	72179808	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MSC-AS1	ENSG00000235531	58833	AC078906.1	ENSG00000253317	16526	None	None
HUERSP3_8q21.11a	HERV	HUERSP3	oneside	chr8	72264478	72268779	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP271	ENSG00000252509	88949	AC022905.1	ENSG00000250979	12913	None	None
HUERSP3_8q21.11b	HERV	HUERSP3	oneside	chr8	72280121	72283984	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022905.1	ENSG00000250979	28556	RNA5SP271	ENSG00000252509	73744	None	None
ERVLB4_8q21.11a	HERV	ERVLB4	internal	chr8	72314397	72316534	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022905.1	ENSG00000250979	62832	RNA5SP271	ENSG00000252509	41194	None	None
HERV9_8q21.11a	HERV	HERV9	prototype	chr8	72387852	72395572	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP271	ENSG00000252509	30037	AC124293.1	ENSG00000212989	34048	None	None
ERV316A3_8q21.11a	HERV	ERV316A3	internal	chr8	72471308	72472247	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011131.1	ENSG00000254347	336	KCNB2	ENSG00000182674	64978	None	None
ERV316A3_8q21.11b	HERV	ERV316A3	internal	chr8	72489080	72490702	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011131.1	ENSG00000254347	18108	KCNB2	ENSG00000182674	46523	None	None
ERV316A3_8q21.11c	HERV	ERV316A3	oneside	chr8	73146806	73148004	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC100823.2	ENSG00000253564	67925	SBSPON	ENSG00000164764	22718	None	chr8:73147484-73147494
HERVL32_8q21.11	HERV	HERVL32	internal	chr8	73754403	73754816	+	noncoding	AC022826.2	protein_coding	ANTISENSE	ENSG00000258677	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_8q21.11a	HERV	MER101	oneside	chr8	73901408	73904641	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GYG1P1	ENSG00000251633	716	AC022868.2	ENSG00000286113	18675	None	None
HERV9_8q21.11b	HERV	HERV9	prototype	chr8	73906025	73914040	+	coding	GYG1P1	unprocessed_pseudogene	ANTISENSE	ENSG00000251633	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_8q21.11b	HERV	MER101	internal	chr8	73915110	73917852	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOC	ENSG00000154582	21317	GYG1P1	ENSG00000251633	100	None	None
MER4B_8q21.11	HERV	MER4B	oneside	chr8	74031305	74036087	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LY96	ENSG00000154589	2226	RNU6-1300P	ENSG00000212348	12590	None	None
ERVLE_8q21.11	HERV	ERVLE	internal	chr8	74113253	74115437	-	noncoding	AC087627.1	lncRNA	ANTISENSE	ENSG00000253983	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q21.11d	HERV	ERV316A3	prototype	chr8	74328352	74331316	+	noncoding	GDAP1	protein_coding	SENSE	ENSG00000104381	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q21.11b	HERV	ERVLB4	internal	chr8	74378555	74380154	+	noncoding	GDAP1	protein_coding	SENSE	ENSG00000104381	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q21.11e	HERV	ERV316A3	internal	chr8	74500019	74502128	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GDAP1	ENSG00000104381	11147	MIR5681A	ENSG00000266502	46415	None	None
ERVLE_8q21.13a	HERV	ERVLE	internal	chr8	74701888	74702996	+	noncoding	MIR2052HG	lncRNA	SENSE	ENSG00000254349	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q21.13a	HERV	ERV316A3	internal	chr8	74730859	74731831	+	noncoding	MIR2052HG	lncRNA	SENSE	ENSG00000254349	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_8q21.13a	HERV	HERVFRD	internal	chr8	74899607	74901527	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011632.2	ENSG00000254043	3305	CRISPLD1	ENSG00000121005	82978	None	None
MER41_8q21.13	HERV	MER41	internal	chr8	74901524	74904636	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011632.2	ENSG00000254043	5222	CRISPLD1	ENSG00000121005	79869	None	None
HML3_8q21.13	HERV	HML3	prototype	chr8	75044052	75050107	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CRISPLD1	ENSG00000121005	9494	AC022274.1	ENSG00000253712	117597	None	None
HERVP71A_8q21.13	HERV	HERVP71A	oneside	chr8	75360991	75362488	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CASC9	ENSG00000249395	36250	PKMP4	ENSG00000254023	14221	None	None
ERV316A3_8q21.13b	HERV	ERV316A3	oneside	chr8	75393597	75395854	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNF4G	ENSG00000164749	12060	PKMP4	ENSG00000254023	16583	None	None
PABLA_8q21.13a	HERV	PABLA	internal	chr8	75619237	75619968	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011029.1	ENSG00000287352	542151	HNF4G	ENSG00000164749	52403	None	None
PABLA_8q21.13b	HERV	PABLA	internal	chr8	75627653	75631209	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011029.1	ENSG00000287352	530910	HNF4G	ENSG00000164749	60819	None	None
ERVLE_8q21.13b	HERV	ERVLE	internal	chr8	75705996	75708227	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNF4G	ENSG00000164749	139162	AC011029.1	ENSG00000287352	453892	None	None
HERVL_8q21.13a	HERV	HERVL	oneside	chr8	76039697	76040852	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011029.1	ENSG00000287352	121267	HNF4G	ENSG00000164749	472863	None	None
HERVL_8q21.13b	HERV	HERVL	oneside	chr8	76103643	76104972	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011029.1	ENSG00000287352	57147	HNF4G	ENSG00000164749	536809	None	None
ERV316A3_8q21.13c	HERV	ERV316A3	oneside	chr8	76505099	76507665	-	noncoding	LINC01111,ZFHX4-AS1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000254300,ENSG00000253661	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q21.13a	HERV	ERVLB4	oneside	chr8	76878756	76880723	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023200.1	ENSG00000253416	23868	ZFHX4	ENSG00000091656	11475	None	None
ERV316A3_8q21.13d	HERV	ERV316A3	oneside	chr8	77019439	77021098	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HIGD1AP18	ENSG00000253952	5411	AC062004.1	ENSG00000254366	377974	None	None
ERV316A3_8q21.13e	HERV	ERV316A3	oneside	chr8	77026137	77029024	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HIGD1AP18	ENSG00000253952	12109	AC062004.1	ENSG00000254366	370048	None	None
ERVLE_8q21.13c	HERV	ERVLE	oneside	chr8	77219959	77221523	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HIGD1AP18	ENSG00000253952	205931	AC062004.1	ENSG00000254366	177549	None	None
ERV316A3_8q21.13f	HERV	ERV316A3	internal	chr8	77815914	77819269	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC062004.1	ENSG00000254366	278624	AC084706.1	ENSG00000254001	328832	None	None
ERVLB4_8q21.13b	HERV	ERVLB4	prototype	chr8	77819272	77824831	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084706.1	ENSG00000254001	323270	AC062004.1	ENSG00000254366	281982	None	None
ERVLE_8q21.13d	HERV	ERVLE	oneside	chr8	77856773	77859723	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC062004.1	ENSG00000254366	319483	AC084706.1	ENSG00000254001	288378	None	None
ERVLE_8q21.13e	HERV	ERVLE	internal	chr8	77889415	77891155	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084706.1	ENSG00000254001	256946	AC062004.1	ENSG00000254366	352125	None	None
ERV316A3_8q21.13g	HERV	ERV316A3	prototype	chr8	78135208	78138453	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084706.1	ENSG00000254001	9648	AC062004.1	ENSG00000254366	597918	None	None
HERV9_8q21.13	HERV	HERV9	oneside	chr8	78147694	78151561	+	noncoding	AC084706.1	lncRNA	SENSE	ENSG00000254001	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_8q21.13c	HERV	HERVL	prototype	chr8	78155679	78162987	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084706.1	ENSG00000254001	1766	PKIA-AS1	ENSG00000254266	105650	None	None
HERV4_8q21.13a	HERV	HERV4	prototype	chr8	78175519	78180840	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PKIA-AS1	ENSG00000254266	87797	AC084706.1	ENSG00000254001	21606	None	None
HERVL_8q21.13d	HERV	HERVL	oneside	chr8	78183721	78187892	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PKIA-AS1	ENSG00000254266	80745	AC084706.1	ENSG00000254001	29808	None	None
ERVLE_8q21.13f	HERV	ERVLE	internal	chr8	78277124	78277721	+	noncoding	PKIA-AS1	lncRNA	ANTISENSE	ENSG00000254266	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_8q21.13	HERV	HML1	internal	chr8	78645811	78649373	+	noncoding	AC068700.2	lncRNA	ANTISENSE	ENSG00000286675	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK14C_8q21.13	HERV	HERVK14C	oneside	chr8	78652076	78654676	+	coding	AC068700.2	lncRNA	ANTISENSE	ENSG00000286675	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q21.13g	HERV	ERVLE	internal	chr8	78862743	78864084	+	noncoding	AC083837.1	lncRNA	SENSE	ENSG00000285744	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q21.13c	HERV	ERVLB4	oneside	chr8	78937023	78941378	-	noncoding	AC083837.1	lncRNA	ANTISENSE	ENSG00000285744	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q21.13d	HERV	ERVLB4	oneside	chr8	78941451	78945827	-	noncoding	AC083837.1	lncRNA	ANTISENSE	ENSG00000285744	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q21.13h	HERV	ERVLE	internal	chr8	79046861	79047901	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138646.1	ENSG00000253659	211501	AC083837.1	ENSG00000285744	90779	None	None
ERVLE_8q21.13i	HERV	ERVLE	internal	chr8	79054942	79057468	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138646.1	ENSG00000253659	201934	AC083837.1	ENSG00000285744	98860	None	None
ERVLE_8q21.13j	HERV	ERVLE	internal	chr8	79185286	79187682	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138646.1	ENSG00000253659	71720	AC083837.1	ENSG00000285744	229204	None	None
ERVLB4_8q21.13e	HERV	ERVLB4	prototype	chr8	79246158	79251002	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC083837.1	ENSG00000285744	290076	AC138646.1	ENSG00000253659	8400	None	None
HERVFRD_8q21.13b	HERV	HERVFRD	prototype	chr8	79285089	79289259	-	noncoding	AC138646.1	lncRNA	ANTISENSE	ENSG00000253659	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_8q21.13a	HERV	HERVH	prototype	chr8	79386106	79391685	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC100870.1	ENSG00000253391	128460	AC138646.1	ENSG00000253659	71155	None	None
HERVW_8q21.13	HERV	HERVW	oneside	chr8	80739716	80743192	+	noncoding	ZNF704	protein_coding	ANTISENSE	ENSG00000164684	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH48_8q21.13	HERV	HERVH48	prototype	chr8	80909710	80911751	-	noncoding	AC012533.1	lncRNA	ANTISENSE	ENSG00000286763	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_8q21.13e	HERV	HERVL	oneside	chr8	81242463	81243446	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009902.1	ENSG00000254014	710	AC079209.1	ENSG00000253214	77197	None	None
HERVL32_8q21.13	HERV	HERVL32	prototype	chr8	81419908	81421776	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FABP5	ENSG00000164687	135131	AC018616.1	ENSG00000253859	17660	None	None
ERVLE_8q21.13k	HERV	ERVLE	internal	chr8	81519560	81520598	+	noncoding	AC018616.1	lncRNA	SENSE	ENSG00000253859	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q21.13h	HERV	ERV316A3	internal	chr8	81533083	81536266	-	noncoding	AC023644.1	lncRNA	ANTISENSE	ENSG00000253374	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr8:81533858-81533942	chr8:81533941-81533942
HERV4_8q21.13b	HERV	HERV4	prototype	chr8	81843896	81849755	+	noncoding	LINC02235	lncRNA	SENSE	ENSG00000254689	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q21.13i	HERV	ERV316A3	internal	chr8	81896635	81897855	-	noncoding	LINC02235	lncRNA	ANTISENSE	ENSG00000254689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_8q21.13b	HERV	HERVH	prototype	chr8	81898016	81903943	-	noncoding	LINC02235	lncRNA	ANTISENSE	ENSG00000254689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_8q21.13c	HERV	HERVH	prototype	chr8	81914411	81919891	+	noncoding	LINC02235	lncRNA	SENSE	ENSG00000254689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr8:81918745-81918747
HERVL40_8q21.13	HERV	HERVL40	prototype	chr8	82560696	82562409	-	noncoding	AC060765.2,AC060765.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000254394,ENSG00000253503	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q21.13f	HERV	ERVLB4	internal	chr8	82914763	82916042	+	noncoding	AC060765.2,AC105031.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000254394,ENSG00000253836	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_8q21.13a	HERV	MER4	oneside	chr8	82967523	82971879	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105031.1	ENSG00000253581	7532	AC060765.2	ENSG00000254394	5597	None	None
MER4_8q21.13b	HERV	MER4	oneside	chr8	82972124	82974960	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105031.1	ENSG00000253581	4451	AC060765.2	ENSG00000254394	10198	None	None
HERV4_8q21.13c	HERV	HERV4	oneside	chr8	83063481	83070505	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105031.1	ENSG00000253581	83595	AC090095.1	ENSG00000254189	29471	None	None
HERVL_8q21.13f	HERV	HERVL	internal	chr8	83086915	83090915	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105031.1	ENSG00000253581	107029	AC090095.1	ENSG00000254189	9061	None	None
ERV316A3_8q21.13j	HERV	ERV316A3	oneside	chr8	83329063	83332871	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01419	ENSG00000253898	70887	AC090132.2	ENSG00000274116	34792	None	None
HUERSP1_8q21.13	HERV	HUERSP1	prototype	chr8	83351995	83359486	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01419	ENSG00000253898	44272	AC090132.2	ENSG00000274116	57724	None	None
HERVL74_8q21.13	HERV	HERVL74	oneside	chr8	83418603	83424421	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01419	ENSG00000253898	9703	AC015522.1	ENSG00000254202	488292	None	None
HERVH_8q21.2a	HERV	HERVH	prototype	chr8	83504703	83510920	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC015522.1	ENSG00000254202	401793	LINC01419	ENSG00000253898	95803	None	None
HERVH_8q21.2b	HERV	HERVH	prototype	chr8	83543715	83550668	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01419	ENSG00000253898	134815	AC015522.1	ENSG00000254202	362045	None	None
ERVLE_8q21.2	HERV	ERVLE	internal	chr8	83712988	83714986	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC015522.1	ENSG00000254202	197727	LINC01419	ENSG00000253898	304088	None	None
HERVL_8q21.2	HERV	HERVL	prototype	chr8	83716901	83718200	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01419	ENSG00000253898	308001	AC015522.1	ENSG00000254202	194513	None	None
MER41_8q21.2	HERV	MER41	internal	chr8	83728663	83729381	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC015522.1	ENSG00000254202	183332	LINC01419	ENSG00000253898	319763	None	None
LTR57_8q21.2a	HERV	LTR57	internal	chr8	83911721	83912417	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01419	ENSG00000253898	502821	AC015522.1	ENSG00000254202	296	None	None
LTR57_8q21.2b	HERV	LTR57	internal	chr8	84641431	84642659	-	noncoding	RALYL	protein_coding	ANTISENSE	ENSG00000184672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q21.2	HERV	ERV316A3	oneside	chr8	84969857	84971069	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	JCHAINP1	ENSG00000253655	9004	ACTBP6	ENSG00000203413	20183	None	None
HERVH_8q21.2c	HERV	HERVH	prototype	chr8	85062831	85069153	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	JCHAINP1	ENSG00000253655	82284	AC091175.1	ENSG00000253283	17462	None	None
HERVH48_8q21.2	HERV	HERVH48	oneside	chr8	85273771	85275053	-	noncoding	CA13	protein_coding	ANTISENSE	ENSG00000185015	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_8q21.2	HERV	HERVL74	prototype	chr8	85377957	85383520	-	noncoding	CA1,CA3	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000133742,ENSG00000164879	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:85378104-85378119
MER4B_8q21.3a	HERV	MER4B	oneside	chr8	86274720	86280127	-	noncoding	SLC7A13	protein_coding	SENSE	ENSG00000164893	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_8q21.3b	HERV	MER4B	oneside	chr8	86280440	86283054	-	coding	SLC7A13	protein_coding	SENSE	ENSG00000164893	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q21.3a	HERV	ERVLB4	oneside	chr8	86773205	86774748	+	noncoding	AC090572.2	lncRNA	SENSE	ENSG00000253778	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_8q21.3	HERV	HERV9	oneside	chr8	86925785	86933213	-	noncoding	CNBD1	protein_coding	ANTISENSE	ENSG00000176571	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_8q21.3	HERV	LTR25	internal	chr8	86953342	86954832	-	noncoding	CNBD1	protein_coding	ANTISENSE	ENSG00000176571	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_8q21.3c	HERV	MER4B	oneside	chr8	87012276	87015196	+	noncoding	CNBD1	protein_coding	SENSE	ENSG00000176571	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_8q21.3d	HERV	MER4B	internal	chr8	87015484	87019363	+	noncoding	CNBD1	protein_coding	SENSE	ENSG00000176571	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_8q21.3	HERV	HUERSP3	internal	chr8	87046067	87055053	-	noncoding	CNBD1	protein_coding	ANTISENSE	ENSG00000176571	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q21.3a	HERV	ERV316A3	oneside	chr8	87109942	87113286	-	noncoding	CNBD1	protein_coding	ANTISENSE	ENSG00000176571	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q21.3b	HERV	ERV316A3	internal	chr8	87237918	87238509	-	noncoding	CNBD1	protein_coding	ANTISENSE	ENSG00000176571	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q21.3a	HERV	ERVLE	internal	chr8	87510993	87512896	-	noncoding	CNBD1	protein_coding	ANTISENSE	ENSG00000176571	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_8q21.3a	HERV	HERVL40	oneside	chr8	87662225	87665372	-	noncoding	AF121898.1	lncRNA	SENSE	ENSG00000253500	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr8:87663749-87663752
ERV316A3_8q21.3c	HERV	ERV316A3	unknown	chr8	87715761	87719773	-	noncoding	AF121898.1	lncRNA	SENSE	ENSG00000253500	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q21.3b	HERV	ERVLE	internal	chr8	87739237	87739952	+	noncoding	AF121898.1	lncRNA	ANTISENSE	ENSG00000253500	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q21.3d	HERV	ERV316A3	internal	chr8	87862864	87865641	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SOX5P1	ENSG00000254376	73176	AC005066.1	ENSG00000273978	1960	None	None
ERVLE_8q21.3c	HERV	ERVLE	internal	chr8	88018904	88023202	-	noncoding	AC037450.1	lncRNA	ANTISENSE	ENSG00000253171	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_8q21.3b	HERV	HERVL40	oneside	chr8	88354380	88356854	+	noncoding	AC090578.1	lncRNA	SENSE	ENSG00000253553	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_8q21.3c	HERV	HERVL40	oneside	chr8	88409802	88411716	-	noncoding	AC090578.1	lncRNA	ANTISENSE	ENSG00000253553	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q21.3b	HERV	ERVLB4	prototype	chr8	88555939	88562496	+	noncoding	AC090578.1	lncRNA	SENSE	ENSG00000253553	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_8q21.3	HERV	HML5	internal	chr8	88607961	88611671	-	noncoding	AC090578.1	lncRNA	ANTISENSE	ENSG00000253553	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q21.3d	HERV	ERVLE	internal	chr8	88656480	88658505	-	noncoding	AC090578.1	lncRNA	ANTISENSE	ENSG00000253553	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11_8q21.3	HERV	HERVK11	oneside	chr8	88670470	88676597	-	noncoding	AC090578.1	lncRNA	ANTISENSE	ENSG00000253553	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_8q21.3a	HERV	HERVH	prototype	chr8	88742217	88747528	-	noncoding	AC090578.1	lncRNA	ANTISENSE	ENSG00000253553	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_8q21.3a	HERV	HERVL	prototype	chr8	88769443	88775883	+	noncoding	AC090578.1	lncRNA	SENSE	ENSG00000253553	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q21.3c	HERV	ERVLB4	internal	chr8	88828809	88830294	-	noncoding	AC090578.1	lncRNA	ANTISENSE	ENSG00000253553	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q21.3e	HERV	ERV316A3	oneside	chr8	89208679	89212564	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP74	ENSG00000253621	30837	AC090578.1	ENSG00000253553	321106	None	None
HERVIP10FH_8q21.3	HERV	HERVIP10FH	oneside	chr8	89233917	89240391	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP74	ENSG00000253621	3010	AC090578.1	ENSG00000253553	346344	None	None
ERVLE_8q21.3e	HERV	ERVLE	internal	chr8	89330815	89335376	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P4	ENSG00000248231	77245	RPSAP74	ENSG00000253621	87022	None	None
HERVL_8q21.3b	HERV	HERVL	prototype	chr8	89448797	89455259	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P4	ENSG00000248231	33726	AF117829.1	ENSG00000251136	130613	None	None
ERVLE_8q21.3f	HERV	ERVLE	internal	chr8	89565770	89568395	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF117829.1	ENSG00000251136	17477	KRT8P4	ENSG00000248231	150699	None	None
ERV316A3_8q21.3f	HERV	ERV316A3	internal	chr8	89987046	89989040	-	noncoding	NBN	protein_coding	SENSE	ENSG00000104320	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_8q21.3b	HERV	HERVH	prototype	chr8	90090224	90095868	-	noncoding	CALB1	protein_coding	SENSE	ENSG00000104327	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:90094894-90094897,chr8:90095664-90095666
HERVL_8q21.3c	HERV	HERVL	prototype	chr8	90409675	90416888	-	coding	AC004083.1,LINC00534	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000254180,ENSG00000253394	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q21.3g	HERV	ERV316A3	oneside	chr8	90771601	90776999	-	noncoding	TMEM64	protein_coding	SENSE	ENSG00000180694	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q21.3g	HERV	ERVLE	internal	chr8	91026905	91028799	+	noncoding	PIP4P2	protein_coding	ANTISENSE	ENSG00000155099	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_8q21.3a	HERV	MER41	prototype	chr8	91500577	91505269	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC103409.1	ENSG00000253901	37655	SLC26A7	ENSG00000147606	102422	None	None
ERV316A3_8q21.3h	HERV	ERV316A3	oneside	chr8	91782429	91784167	-	noncoding	AC103409.1	lncRNA	SENSE	ENSG00000253901	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_8q21.3c	HERV	HERVH	prototype	chr8	91948321	91952724	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPS16P1	ENSG00000229182	30403	RUNX1T1	ENSG00000079102	2243	None	None
ERV316A3_8q21.3i	HERV	ERV316A3	oneside	chr8	92175870	92177756	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104339.1	ENSG00000233778	31435	AC022695.1	ENSG00000253118	174156	None	None
MER41_8q21.3b	HERV	MER41	prototype	chr8	92203830	92209322	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022695.1	ENSG00000253118	142590	AC104339.1	ENSG00000233778	59395	None	None
HML3_8q21.3	HERV	HML3	prototype	chr8	92236543	92242718	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104339.1	ENSG00000233778	92108	AC022695.1	ENSG00000253118	109194	None	None
HERVL_8q22.1a	HERV	HERVL	oneside	chr8	92765117	92770386	-	noncoding	AC104211.1,AC117834.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000248858,ENSG00000253577	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q22.1	HERV	ERVLB4	internal	chr8	92905675	92906321	+	noncoding	AC117834.1,TRIQK	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000253197,ENSG00000205133	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q22.1a	HERV	ERVLE	internal	chr8	93351627	93353795	+	noncoding	LINC00535	lncRNA	ANTISENSE	ENSG00000246662	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q22.1a	HERV	ERV316A3	internal	chr8	93523653	93528559	-	noncoding	LINC00535	lncRNA	SENSE	ENSG00000246662	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q22.1b	HERV	ERV316A3	oneside	chr8	93529002	93530374	-	noncoding	LINC00535	lncRNA	SENSE	ENSG00000246662	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_8q22.1b	HERV	HERVL	oneside	chr8	94296141	94303550	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS4XP10	ENSG00000244217	49373	GEM	ENSG00000164949	33791	None	None
HERVFRD_8q22.1	HERV	HERVFRD	internal	chr8	94576469	94579667	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023632.3	ENSG00000254190	10448	AC023632.2	ENSG00000253704	5821	None	None
ERVLE_8q22.1b	HERV	ERVLE	oneside	chr8	95674839	95676764	+	noncoding	C8orf37-AS1	lncRNA	SENSE	ENSG00000253773	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q22.1c	HERV	ERV316A3	oneside	chr8	95856949	95858606	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C8orf37-AS1	ENSG00000253773	45695	AC012339.2	ENSG00000254079	89175	None	None
HERVL_8q22.1c	HERV	HERVL	oneside	chr8	95870616	95872334	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012339.2	ENSG00000254079	75447	C8orf37-AS1	ENSG00000253773	59362	None	None
ERV316A3_8q22.1d	HERV	ERV316A3	internal	chr8	96735582	96736748	-	noncoding	CPQ	protein_coding	ANTISENSE	ENSG00000104324	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_8q22.1d	HERV	HERVL	oneside	chr8	96889472	96891692	-	noncoding	CPQ	protein_coding	ANTISENSE	ENSG00000104324	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_8q22.1a	HERV	HERVH	prototype	chr8	97175029	97180739	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CPQ	ENSG00000104324	25375	AP003115.1	ENSG00000260640	61003	None	None
HERVH_8q22.1b	HERV	HERVH	prototype	chr8	97200770	97206656	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CPQ	ENSG00000104324	51116	AP003115.1	ENSG00000260640	35086	None	None
HERVH_8q22.1c	HERV	HERVH	oneside	chr8	97827675	97831909	-	noncoding	LAPTM4B	protein_coding	ANTISENSE	ENSG00000104341	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr8:97831637-97831858	None
ERVLE_8q22.2a	HERV	ERVLE	internal	chr8	98058964	98061563	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ERICH5	ENSG00000177459	2959	RNU6-703P	ENSG00000252755	10002	None	None
ERVLE_8q22.2b	HERV	ERVLE	internal	chr8	98769163	98770731	+	noncoding	STK3	protein_coding	ANTISENSE	ENSG00000104375	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_8q22.2	HERV	HERVL40	internal	chr8	99217953	99219926	-	noncoding	VPS13B	protein_coding	ANTISENSE	ENSG00000132549	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_8q22.2	HERV	HERVH	prototype	chr8	99943695	99949609	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105328.1	ENSG00000287952	48574	RGS22	ENSG00000132554	11327	None	chr8:99944796-99944818,chr8:99945102-99945126,chr8:99948862-99948872
HERVL_8q22.2	HERV	HERVL	prototype	chr8	100202983	100209403	+	coding	SPAG1	protein_coding	SENSE	ENSG00000104450	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q22.3a	HERV	ERVLE	internal	chr8	102031895	102034477	+	noncoding	NCALD	protein_coding	ANTISENSE	ENSG00000104490	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_8q22.3	HERV	MER41	prototype	chr8	102086680	102092487	+	noncoding	NCALD	protein_coding	ANTISENSE	ENSG00000104490	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q22.3	HERV	ERVLB4	oneside	chr8	102165076	102166670	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RRM2B	ENSG00000048392	37832	AP001328.1	ENSG00000254492	10351	None	None
ERV316A3_8q22.3a	HERV	ERV316A3	internal	chr8	102169665	102172028	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001328.1	ENSG00000254492	14940	RRM2B	ENSG00000048392	32474	None	None
PRIMA4_8q22.3	HERV	PRIMA4	internal	chr8	102986131	102986634	-	noncoding	AZIN1-AS1	lncRNA	ANTISENSE	ENSG00000253320	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr8:102985786-102986141	None
HERVH_8q22.3a	HERV	HERVH	prototype	chr8	103002078	103004589	+	noncoding	AZIN1-AS1	lncRNA	SENSE	ENSG00000253320	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q22.3b	HERV	ERVLE	internal	chr8	103307913	103309882	-	noncoding	FZD6	protein_coding	ANTISENSE	ENSG00000164930	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q22.3c	HERV	ERVLE	internal	chr8	103391554	103392722	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1011P	ENSG00000207399	6487	SLC25A32	ENSG00000164933	5913	None	None
ERV316A3_8q22.3b	HERV	ERV316A3	oneside	chr8	103846269	103848598	-	noncoding	RIMS2	protein_coding	ANTISENSE	ENSG00000176406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q22.3c	HERV	ERV316A3	internal	chr8	103897037	103901527	-	noncoding	RIMS2	protein_coding	ANTISENSE	ENSG00000176406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_8q22.3a	HERV	MER101	internal	chr8	104195921	104197177	-	noncoding	RIMS2	protein_coding	ANTISENSE	ENSG00000176406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_8q22.3b	HERV	MER101	internal	chr8	104197477	104198164	-	noncoding	RIMS2	protein_coding	ANTISENSE	ENSG00000176406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_8q22.3b	HERV	HERVH	prototype	chr8	104285912	104292093	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RIMS2	ENSG00000176406	29818	DPYS	ENSG00000147647	38231	None	None
ERVLE_8q23.1a	HERV	ERVLE	internal	chr8	105245457	105247319	+	noncoding	ZFPM2	protein_coding	SENSE	ENSG00000169946	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q23.1b	HERV	ERVLE	internal	chr8	106061145	106061731	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZFPM2-AS1	ENSG00000251003	621	SLC16A14P1	ENSG00000213708	154032	chr8:106061559-106061944	None
ERV316A3_8q23.1a	HERV	ERV316A3	internal	chr8	106103648	106104556	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC16A14P1	ENSG00000213708	111207	ZFPM2-AS1	ENSG00000251003	43124	None	None
ERVLE_8q23.1c	HERV	ERVLE	internal	chr8	106253286	106254199	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027031.1	ENSG00000254021	11236	SLC16A14P1	ENSG00000213708	36068	None	None
ERVLB4_8q23.1a	HERV	ERVLB4	oneside	chr8	106401052	106405396	-	noncoding	OXR1	protein_coding	ANTISENSE	ENSG00000164830	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_8q23.1	HERV	HERV9	prototype	chr8	106788709	106794107	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ABRA	ENSG00000174429	18465	AP003789.1	ENSG00000275905	186860	None	None
HERV30_8q23.1a	HERV	HERV30	oneside	chr8	107597395	107601899	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PGAM1P13	ENSG00000248838	45380	AC091010.1	ENSG00000286766	90979	None	None
HERV30_8q23.1b	HERV	HERV30	oneside	chr8	107601946	107607129	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGAM1P13	ENSG00000248838	40150	AC091010.1	ENSG00000286766	95530	None	None
ERVLB4_8q23.1b	HERV	ERVLB4	unknown	chr8	107858481	107860278	+	noncoding	AC025508.1	lncRNA	SENSE	ENSG00000287949	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q23.1c	HERV	ERVLB4	internal	chr8	107867189	107868097	+	noncoding	AC025508.1	lncRNA	SENSE	ENSG00000287949	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_8q23.1	HERV	HUERSP1	internal	chr8	107915261	107915931	+	noncoding	AC025508.1,RSPO2	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000287949,ENSG00000147655	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_8q23.1	HERV	MER41	internal	chr8	107915901	107919264	+	noncoding	AC025508.1,RSPO2	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000287949,ENSG00000147655	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q23.1d	HERV	ERVLE	internal	chr8	108091153	108091699	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001331.1	ENSG00000230948	39401	RSPO2	ENSG00000147655	7511	None	None
ERV316A3_8q23.1b	HERV	ERV316A3	oneside	chr8	108953759	108956489	-	noncoding	AC104248.1	lncRNA	SENSE	ENSG00000253796	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q23.1d	HERV	ERVLB4	internal	chr8	109174130	109176547	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NUDCD1	ENSG00000120526	64372	TRHR	ENSG00000174417	54546	None	None
ERVLE_8q23.1e	HERV	ERVLE	internal	chr8	109183112	109184042	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NUDCD1	ENSG00000120526	56877	TRHR	ENSG00000174417	63528	None	None
MER61_8q23.1a	HERV	MER61	oneside	chr8	109210785	109211735	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRHR	ENSG00000174417	91201	NUDCD1	ENSG00000120526	29184	None	None
MER61_8q23.1b	HERV	MER61	oneside	chr8	109219471	109223779	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRHR	ENSG00000174417	99887	NUDCD1	ENSG00000120526	17140	None	None
HERVH_8q23.1	HERV	HERVH	prototype	chr8	109301077	109307459	+	noncoding	NUDCD1,AC021237.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000120526,ENSG00000250267	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q23.1f	HERV	ERVLE	internal	chr8	109378678	109380056	+	noncoding	PKHD1L1	protein_coding	SENSE	ENSG00000205038	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q23.1e	HERV	ERVLB4	internal	chr8	109466977	109469251	-	noncoding	PKHD1L1	protein_coding	ANTISENSE	ENSG00000205038	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q23.1c	HERV	ERV316A3	prototype	chr8	109499764	109503023	-	noncoding	PKHD1L1	protein_coding	ANTISENSE	ENSG00000205038	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q23.2a	HERV	ERVLB4	internal	chr8	109795394	109796627	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023245.3	ENSG00000283555	77286	AC023245.2	ENSG00000255099	13106	None	None
ERVLB4_8q23.2b	HERV	ERVLB4	internal	chr8	109796685	109797473	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023245.3	ENSG00000283555	76440	AC023245.2	ENSG00000255099	14397	None	None
ERV316A3_8q23.2a	HERV	ERV316A3	prototype	chr8	109865243	109868041	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023245.2	ENSG00000255099	82955	AC023245.3	ENSG00000283555	5872	None	None
HERVL_8q23.2a	HERV	HERVL	prototype	chr8	109938671	109944934	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCNV1	ENSG00000164794	18702	AC023245.1	ENSG00000241385	38909	None	None
HUERSP2_8q23.2	HERV	HUERSP2	prototype	chr8	110059854	110064451	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCNV1	ENSG00000164794	84083	RPSAP48	ENSG00000240590	40625	None	None
ERV316A3_8q23.2b	HERV	ERV316A3	internal	chr8	110395653	110397219	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073023.1	ENSG00000253956	46046	AC090819.1	ENSG00000253107	158189	None	None
ERVL_8q23.2a	HERV	ERVL	internal	chr8	110435665	110442761	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090819.1	ENSG00000253107	112647	AC073023.1	ENSG00000253956	86058	None	None
ERVLE_8q23.2a	HERV	ERVLE	oneside	chr8	110546540	110548971	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090819.1	ENSG00000253107	6437	AC073023.1	ENSG00000253956	196933	None	None
HUERSP3_8q23.2	HERV	HUERSP3	prototype	chr8	110829647	110835968	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01608	ENSG00000253877	64028	NDUFB9P3	ENSG00000253994	19753	None	None
ERVLE_8q23.2b	HERV	ERVLE	internal	chr8	110855277	110856345	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFB9P3	ENSG00000253994	45383	LINC01608	ENSG00000253877	43651	None	None
HERVL_8q23.2b	HERV	HERVL	prototype	chr8	110880851	110886992	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFB9P3	ENSG00000253994	70957	LINC01608	ENSG00000253877	13004	None	None
HERVL18_8q23.2	HERV	HERVL18	oneside	chr8	110890282	110894968	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01608	ENSG00000253877	5028	NDUFB9P3	ENSG00000253994	80388	None	None
ERVL_8q23.2b	HERV	ERVL	internal	chr8	110936879	110938055	-	noncoding	LINC01608	lncRNA	SENSE	ENSG00000253877	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q23.2c	HERV	ERV316A3	internal	chr8	111012230	111013544	-	noncoding	LINC01608	lncRNA	SENSE	ENSG00000253877	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q23.2c	HERV	ERVLE	internal	chr8	111057346	111060578	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01608	ENSG00000253877	16974	LINC01609	ENSG00000253103	32685	None	None
ERVLB4_8q23.3a	HERV	ERVLB4	unknown	chr8	111159459	111164342	+	noncoding	LINC01609	lncRNA	ANTISENSE	ENSG00000253103	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_8q23.3a	HERV	MER4	oneside	chr8	111227490	111228968	+	noncoding	LINC01609	lncRNA	ANTISENSE	ENSG00000253103	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_8q23.3b	HERV	MER4	oneside	chr8	111229011	111235713	+	noncoding	LINC01609	lncRNA	ANTISENSE	ENSG00000253103	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q23.3h	HERV	ERV316A3	tandem*	chr8	111238209	111242759	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01609	ENSG00000253103	2006	LINC02237	ENSG00000253434	133880	None	None
ERV316A3_8q23.3a	HERV	ERV316A3	prototype	chr8	111258299	111262923	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02237	ENSG00000253434	113716	LINC01609	ENSG00000253103	22096	None	None
ERVLE_8q23.3a	HERV	ERVLE	internal	chr8	111372041	111372544	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01609	ENSG00000253103	135838	LINC02237	ENSG00000253434	4095	None	None
ERV316A3_8q23.3b	HERV	ERV316A3	internal	chr8	111914376	111915950	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02237	ENSG00000253434	156666	RNU4-37P	ENSG00000222146	232792	None	None
ERVLE_8q23.3b	HERV	ERVLE	internal	chr8	111956745	111958997	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02237	ENSG00000253434	199035	RNU4-37P	ENSG00000222146	189745	None	None
ERVLE_8q23.3c	HERV	ERVLE	internal	chr8	112060576	112063846	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU4-37P	ENSG00000222146	84896	LINC02237	ENSG00000253434	302866	None	None
HERVH_8q23.3a	HERV	HERVH	prototype	chr8	112195874	112201403	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU4-37P	ENSG00000222146	47049	CSMD3	ENSG00000164796	21525	None	None
ERVLE_8q23.3d	HERV	ERVLE	internal	chr8	112754877	112756290	-	noncoding	CSMD3	protein_coding	SENSE	ENSG00000164796	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_8q23.3a	HERV	HERVL40	prototype	chr8	112900214	112905845	+	noncoding	CSMD3	protein_coding	ANTISENSE	ENSG00000164796	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr8:112903149-112903152
HERVL40_8q23.3b	HERV	HERVL40	oneside	chr8	113233804	113238852	-	noncoding	CSMD3	protein_coding	SENSE	ENSG00000164796	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV4_8q23.3a	HERV	HERV4	oneside	chr8	113470100	113471481	-	noncoding	AC055788.1	lncRNA	ANTISENSE	ENSG00000286937	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV4_8q23.3b	HERV	HERV4	internal	chr8	113472296	113475904	-	noncoding	AC055788.1	lncRNA	ANTISENSE	ENSG00000286937	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q23.3b	HERV	ERVLB4	oneside	chr8	113492842	113497453	+	noncoding	AC055788.1	lncRNA	SENSE	ENSG00000286937	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PABLA_8q23.3	HERV	PABLA	oneside	chr8	113501348	113506150	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC103993.1	ENSG00000253207	94160	AC055788.1	ENSG00000286937	8067	None	None
HERVH_8q23.3b	HERV	HERVH	oneside	chr8	113510132	113515376	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC103993.1	ENSG00000253207	84934	AC055788.1	ENSG00000286937	16851	None	None
HERVFRD_8q23.3a	HERV	HERVFRD	oneside	chr8	113517519	113522730	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC055788.1	ENSG00000286937	24238	AC103993.1	ENSG00000253207	77580	None	chr8:113519523-113519525
HERVFRD_8q23.3b	HERV	HERVFRD	oneside	chr8	113525316	113527541	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC055788.1	ENSG00000286937	32035	AC103993.1	ENSG00000253207	72769	None	None
ERVLE_8q23.3e	HERV	ERVLE	internal	chr8	113657688	113660493	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC103993.1	ENSG00000253207	40730	AC046174.1	ENSG00000206719	290393	None	None
ERV316A3_8q23.3c	HERV	ERV316A3	internal	chr8	113754591	113756811	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC103993.1	ENSG00000253207	137633	AC046174.1	ENSG00000206719	194075	None	None
ERV316A3_8q23.3d	HERV	ERV316A3	internal	chr8	113760656	113764205	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC046174.1	ENSG00000206719	186681	AC103993.1	ENSG00000253207	143698	None	None
HERVL_8q23.3a	HERV	HERVL	prototype	chr8	113934319	113941548	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC046174.1	ENSG00000206719	9338	AC103993.1	ENSG00000253207	317361	None	None
ERVLB4_8q23.3c	HERV	ERVLB4	internal	chr8	114194712	114197771	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC064802.1	ENSG00000254339	84296	AC046174.1	ENSG00000206719	243714	None	None
HERVH_8q23.3c	HERV	HERVH	prototype	chr8	114241604	114247083	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC046174.1	ENSG00000206719	290606	AC064802.1	ENSG00000254339	34984	chr8:114243560-114243629	None
HERVH_8q23.3d	HERV	HERVH	prototype	chr8	114281698	114287733	+	noncoding	AC064802.1	lncRNA	SENSE	ENSG00000254339	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:114282077-114282091
ERV316A3_8q23.3e	HERV	ERV316A3	oneside	chr8	114483577	114484798	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CARS1P2	ENSG00000253756	306855	AC025881.1	ENSG00000253499	164666	None	None
ERVLE_8q23.3f	HERV	ERVLE	internal	chr8	114808316	114809771	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CARS1P2	ENSG00000253756	16387	TRPS1	ENSG00000104447	598725	None	None
ERV316A3_8q23.3f	HERV	ERV316A3	internal	chr8	114860055	114861582	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRPS1	ENSG00000104447	546914	CARS1P2	ENSG00000253756	68126	None	None
HUERSP3_8q23.3	HERV	HUERSP3	oneside	chr8	114915714	114918648	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRPS1	ENSG00000104447	489848	CARS1P2	ENSG00000253756	123785	None	None
HUERSP1_8q23.3	HERV	HUERSP1	internal	chr8	114945378	114946309	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CARS1P2	ENSG00000253756	153449	TRPS1	ENSG00000104447	462187	None	None
ERVLB4_8q23.3d	HERV	ERVLB4	oneside	chr8	115069248	115071092	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CARS1P2	ENSG00000253756	277319	TRPS1	ENSG00000104447	337404	None	None
MER34B_8q23.3	HERV	MER34B	oneside	chr8	115202704	115205173	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CARS1P2	ENSG00000253756	410775	TRPS1	ENSG00000104447	203323	None	chr8:115203069-115203076,chr8:115203106-115203149,chr8:115203379-115203386
HERVH_8q23.3e	HERV	HERVH	prototype	chr8	115212253	115217978	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CARS1P2	ENSG00000253756	420324	TRPS1	ENSG00000104447	190518	None	None
HERVH_8q23.3f	HERV	HERVH	prototype	chr8	115814948	115819406	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRPS1	ENSG00000104447	5275	LINC00536	ENSG00000249917	131105	None	None
HERVL_8q23.3b	HERV	HERVL	prototype	chr8	116144991	116151531	-	noncoding	LINC00536	lncRNA	SENSE	ENSG00000249917	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q23.3g	HERV	ERVLE	internal	chr8	116247046	116247886	+	noncoding	LINC00536	lncRNA	ANTISENSE	ENSG00000249917	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q23.3g	HERV	ERV316A3	internal	chr8	116247882	116249085	+	noncoding	LINC00536	lncRNA	ANTISENSE	ENSG00000249917	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q24.11	HERV	ERVLE	internal	chr8	116775264	116776612	+	noncoding	UTP23	protein_coding	SENSE	ENSG00000147679	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q24.11a	HERV	ERV316A3	oneside	chr8	117390978	117393370	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084114.1	ENSG00000286308	72277	MED30	ENSG00000164758	127343	None	None
ERV316A3_8q24.11b	HERV	ERV316A3	oneside	chr8	117402490	117406395	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084114.1	ENSG00000286308	83789	MED30	ENSG00000164758	114318	None	None
ERV316A3_8q24.11c	HERV	ERV316A3	oneside	chr8	117475665	117478774	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MED30	ENSG00000164758	41939	AC084114.1	ENSG00000286308	156964	None	None
ERV316A3_8q24.11d	HERV	ERV316A3	prototype	chr8	117594591	117597824	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MED30	ENSG00000164758	54329	EXT1	ENSG00000182197	196666	None	None
ERV316A3_8q24.12a	HERV	ERV316A3	prototype	chr8	118816444	118817918	+	noncoding	SAMD12-AS1	lncRNA	SENSE	ENSG00000281641	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q24.12b	HERV	ERV316A3	prototype	chr8	119227340	119230386	-	noncoding	MAL2,MAL2-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000147676,ENSG00000253972	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q24.12c	HERV	ERV316A3	oneside	chr8	119248305	119254183	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548AZ	ENSG00000276479	70988	MAL2-AS1	ENSG00000253972	1457	None	None
ERV316A3_8q24.12d	HERV	ERV316A3	internal	chr8	119257465	119258225	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548AZ	ENSG00000276479	66946	MAL2-AS1	ENSG00000253972	10617	None	None
ERV316A3_8q24.12e	HERV	ERV316A3	oneside	chr8	119339966	119342719	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548AZ	ENSG00000276479	14701	AC021733.4	ENSG00000286282	7572	None	None
ERVLE_8q24.12	HERV	ERVLE	internal	chr8	119518017	119520599	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ENPP2	ENSG00000136960	36487	AC021733.3	ENSG00000254037	37242	None	None
ERV316A3_8q24.12f	HERV	ERV316A3	oneside	chr8	121213958	121216002	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068413.1	ENSG00000253619	94204	RPL35AP19	ENSG00000239872	164135	None	None
HERVL74_8q24.13	HERV	HERVL74	oneside	chr8	121510181	121514719	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL35AP19	ENSG00000239872	129716	HAS2	ENSG00000170961	97397	None	None
ERVLE_8q24.13a	HERV	ERVLE	internal	chr8	122030942	122031907	-	noncoding	AC037486.1	lncRNA	SENSE	ENSG00000254303	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q24.13a	HERV	ERV316A3	oneside	chr8	122140896	122142063	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SMILR	ENSG00000255364	272269	AC037486.1	ENSG00000254303	13712	chr8:122140953-122141027	None
HERVH48_8q24.13	HERV	HERVH48	prototype	chr8	122830053	122836867	-	noncoding	ZHX2	protein_coding	ANTISENSE	ENSG00000178764	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q24.13b	HERV	ERVLE	internal	chr8	123155034	123156653	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TBC1D31	ENSG00000156787	2881	AC068228.4	ENSG00000287657	1076	None	None
ERVLE_8q24.13c	HERV	ERVLE	internal	chr8	123300023	123301039	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018992.1	ENSG00000253336	9520	ATAD2	ENSG00000156802	18811	None	None
ERVLE_8q24.13d	HERV	ERVLE	internal	chr8	123554266	123555046	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FBXO32	ENSG00000156804	13060	AC090193.1	ENSG00000254113	8024	None	None
ERVLB4_8q24.13a	HERV	ERVLB4	internal	chr8	123851244	123852471	-	noncoding	FER1L6	protein_coding	ANTISENSE	ENSG00000214814	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q24.13e	HERV	ERVLE	internal	chr8	124207265	124209752	-	noncoding	AC090921.1	lncRNA	SENSE	ENSG00000214803	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER34B_8q24.13	HERV	MER34B	oneside	chr8	124340148	124340828	+	noncoding	TMEM65	protein_coding	ANTISENSE	ENSG00000164983	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_8q24.13	HERV	PRIMA41	oneside	chr8	124442248	124447580	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRMT12	ENSG00000183665	3240	TMEM65	ENSG00000164983	69556	None	None
ERV316A3_8q24.13b	HERV	ERV316A3	internal	chr8	124464425	124467547	+	noncoding	RNF139-AS1	lncRNA	ANTISENSE	ENSG00000245149	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q24.13f	HERV	ERVLE	internal	chr8	124464531	124465163	+	noncoding	RNF139-AS1	lncRNA	ANTISENSE	ENSG00000245149	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q24.13c	HERV	ERV316A3	oneside	chr8	124885312	124886037	-	noncoding	LINC00964	lncRNA	ANTISENSE	ENSG00000249816	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q24.13d	HERV	ERV316A3	oneside	chr8	124886335	124889425	-	noncoding	LINC00964	lncRNA	ANTISENSE	ENSG00000249816	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_8q24.13	HERV	HERVW	oneside	chr8	124899765	124904056	-	noncoding	LINC00964	lncRNA	ANTISENSE	ENSG00000249816	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_8q24.13a	HERV	HERVIP10FH	internal	chr8	124904044	124906459	-	noncoding	LINC00964	lncRNA	ANTISENSE	ENSG00000249816	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_8q24.13b	HERV	HERVIP10FH	oneside	chr8	124907227	124911915	+	noncoding	LINC00964	lncRNA	SENSE	ENSG00000249816	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVL_8q24.13	HERV	ERVL	oneside	chr8	124987055	124992252	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF572	ENSG00000180938	7666	AC009908.1	ENSG00000253513	4733	None	None
ERVLE_8q24.13g	HERV	ERVLE	internal	chr8	125172673	125173696	-	noncoding	NSMCE2	protein_coding	ANTISENSE	ENSG00000156831	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_8q24.13	HERV	HERVP71A	prototype	chr8	125986715	125994823	+	noncoding	AC016074.2,LINC00861	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000286122,ENSG00000245164	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_8q24.13	HERV	HML3	prototype	chr8	126007722	126013982	+	noncoding	AC016074.2,LINC00861	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000286122,ENSG00000245164	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q24.13b	HERV	ERVLB4	oneside	chr8	126033341	126036390	-	noncoding	LINC00861	lncRNA	SENSE	ENSG00000245164	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_8q24.13	HERV	LTR57	prototype	chr8	126094864	126100453	+	noncoding	LINC00861	lncRNA	ANTISENSE	ENSG00000245164	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_8q24.13	HERV	MER41	internal	chr8	126218795	126223153	-	noncoding	LINC00861	lncRNA	SENSE	ENSG00000245164	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q24.21a	HERV	ERV316A3	internal	chr8	126725308	126726071	-	noncoding	PCAT1	lncRNA	ANTISENSE	ENSG00000253438	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q24.21b	HERV	ERV316A3	internal	chr8	126726140	126727872	+	noncoding	PCAT1	lncRNA	SENSE	ENSG00000253438	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_8q24.21a	HERV	HERVH	prototype	chr8	127431703	127437464	+	noncoding	CASC8	lncRNA	ANTISENSE	ENSG00000246228	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_8q24.21	HERV	HERV9	oneside	chr8	128375035	128377135	+	noncoding	AC100822.1	lncRNA	SENSE	ENSG00000286034	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_8q24.21	HERV	HERVW	internal	chr8	128377852	128381876	-	noncoding	AC100822.1	lncRNA	ANTISENSE	ENSG00000286034	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_8q24.21b	HERV	HERVH	prototype	chr8	128611901	128617630	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC26	ENSG00000229140	16569	LINC00824	ENSG00000254275	47222	chr8:128613898-128614167	chr8:128617221-128617248,chr8:128614138-128614167
HERVH_8q24.21c	HERV	HERVH	prototype	chr8	128914459	128920320	+	noncoding	CCDC26	lncRNA	ANTISENSE	ENSG00000229140	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q24.21	HERV	ERVLB4	internal	chr8	129230956	129231613	+	noncoding	CCDC26	lncRNA	ANTISENSE	ENSG00000229140	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q24.21c	HERV	ERV316A3	oneside	chr8	129265172	129266245	-	noncoding	CCDC26	lncRNA	SENSE	ENSG00000229140	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_8q24.21	HERV	HERVL40	oneside	chr8	129932201	129934402	+	noncoding	FAM49B	protein_coding	ANTISENSE	ENSG00000153310	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q24.22a	HERV	ERV316A3	oneside	chr8	130739974	130740522	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090987.1	ENSG00000253656	84262	ADCY8	ENSG00000155897	39779	None	None
HUERSP3_8q24.22	HERV	HUERSP3	prototype	chr8	130827138	130830670	+	noncoding	ADCY8	protein_coding	ANTISENSE	ENSG00000155897	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q24.22b	HERV	ERV316A3	oneside	chr8	131011708	131012949	+	noncoding	ADCY8	protein_coding	ANTISENSE	ENSG00000155897	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q24.22c	HERV	ERV316A3	oneside	chr8	131072541	131073546	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087341.1	ENSG00000253407	56215	ADCY8	ENSG00000155897	31632	None	None
HERVL_8q24.22	HERV	HERVL	oneside	chr8	131156923	131161048	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104257.1	ENSG00000253507	147497	AC087341.1	ENSG00000253407	11975	None	None
ERV316A3_8q24.22d	HERV	ERV316A3	prototype	chr8	131274175	131276707	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087341.1	ENSG00000253407	129227	AC104257.1	ENSG00000253507	31838	None	None
HERVH_8q24.22a	HERV	HERVH	prototype	chr8	131310175	131315847	+	noncoding	AC104257.1	lncRNA	SENSE	ENSG00000253507	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q24.22a	HERV	ERVLE	internal	chr8	131459667	131462573	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC060788.1	ENSG00000254255	249939	AC104040.1	ENSG00000252158	26798	None	None
HERVH_8q24.22b	HERV	HERVH	prototype	chr8	131740755	131746622	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC060788.1	ENSG00000254255	27775	EFR3A	ENSG00000132294	157471	None	None
HERVH_8q24.22c	HERV	HERVH	prototype	chr8	131820155	131825105	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC060788.1	ENSG00000254255	107175	EFR3A	ENSG00000132294	78988	None	None
HERVH_8q24.22d	HERV	HERVH	prototype	chr8	132080238	132086002	-	noncoding	AC100868.1,HHLA1	protein_coding,protein_coding	SENSE,SENSE	ENSG00000258417,ENSG00000132297	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER61_8q24.22	HERV	MER61	prototype	chr8	132149174	132154866	+	noncoding	KCNQ3	protein_coding	ANTISENSE	ENSG00000184156	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q24.22e	HERV	ERV316A3	oneside	chr8	132536735	132537691	+	noncoding	HPYR1	lncRNA	ANTISENSE	ENSG00000253521	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q24.22b	HERV	ERVLE	oneside	chr8	132568395	132571059	+	noncoding	LRRC6	protein_coding	ANTISENSE	ENSG00000129295	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q24.22c	HERV	ERVLE	internal	chr8	133179697	133180913	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TG	ENSG00000042832	44794	CCN4	ENSG00000104415	10126	None	None
ERV316A3_8q24.22f	HERV	ERV316A3	oneside	chr8	133844328	133846701	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC110741.1	ENSG00000253593	39795	AC133634.1	ENSG00000253561	29791	None	None
ERV316A3_8q24.22g	HERV	ERV316A3	oneside	chr8	133862286	133864323	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC110741.1	ENSG00000253593	22173	AC133634.1	ENSG00000253561	47749	None	None
ERVLE_8q24.22d	HERV	ERVLE	internal	chr8	134118199	134119679	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC110741.2	ENSG00000271240	154940	AC105180.2	ENSG00000288067	70704	None	None
ERVLE_8q24.22e	HERV	ERVLE	internal	chr8	134357461	134358363	-	noncoding	AC105180.2	lncRNA	SENSE	ENSG00000288067	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q24.22f	HERV	ERVLE	internal	chr8	134414641	134416096	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZFAT	ENSG00000066827	61692	AC105180.2	ENSG00000288067	24154	None	None
ERVLE_8q24.22g	HERV	ERVLE	internal	chr8	134419194	134421179	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZFAT	ENSG00000066827	56609	AC105180.2	ENSG00000288067	28707	None	None
ERV316A3_8q24.22h	HERV	ERV316A3	internal	chr8	134897046	134898065	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL23AP56	ENSG00000244413	80762	AC103764.1	ENSG00000251218	15147	None	None
ERV316A3_8q24.22i	HERV	ERV316A3	prototype	chr8	135039959	135042697	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL23AP56	ENSG00000244413	60680	LINC01591	ENSG00000254083	191434	None	None
ERV316A3_8q24.22j	HERV	ERV316A3	prototype	chr8	135064013	135066866	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01591	ENSG00000254083	167265	RPL23AP56	ENSG00000244413	84734	None	None
ERVLE_8q24.22h	HERV	ERVLE	internal	chr8	135275188	135275838	+	noncoding	LINC01591	lncRNA	SENSE	ENSG00000254083	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q24.22i	HERV	ERVLE	internal	chr8	135353782	135355434	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC040914.1	ENSG00000254372	100431	LINC01591	ENSG00000254083	54063	None	None
ERVLE_8q24.22j	HERV	ERVLE	internal	chr8	135378469	135380784	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC040914.1	ENSG00000254372	75081	LINC01591	ENSG00000254083	78750	None	None
ERVLE_8q24.23a	HERV	ERVLE	internal	chr8	135544134	135545070	-	noncoding	KHDRBS3	protein_coding	ANTISENSE	ENSG00000131773	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_8q24.23a	HERV	HERVH	prototype	chr8	135767191	135773012	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02055	ENSG00000254101	86357	RNU1-35P	ENSG00000199652	24696	None	None
ERV316A3_8q24.23a	HERV	ERV316A3	oneside	chr8	135871822	135872956	-	noncoding	LINC02055	lncRNA	ANTISENSE	ENSG00000254101	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q24.23	HERV	ERVLB4	internal	chr8	135948198	135948809	+	noncoding	LINC02055	lncRNA	SENSE	ENSG00000254101	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q24.23b	HERV	ERV316A3	internal	chr8	135975337	135976436	-	noncoding	LINC02055	lncRNA	ANTISENSE	ENSG00000254101	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q24.23c	HERV	ERV316A3	oneside	chr8	136115313	136118334	-	noncoding	LINC02055	lncRNA	ANTISENSE	ENSG00000254101	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q24.23d	HERV	ERV316A3	internal	chr8	136147227	136148953	-	noncoding	LINC02055	lncRNA	ANTISENSE	ENSG00000254101	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q24.23e	HERV	ERV316A3	oneside	chr8	136256209	136258492	-	noncoding	LINC02055,AC023781.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000254101,ENSG00000285683	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q24.23f	HERV	ERV316A3	internal	chr8	136258528	136259131	-	noncoding	LINC02055,AC023781.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000254101,ENSG00000285683	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q24.23b	HERV	ERVLE	internal	chr8	136361671	136365431	+	noncoding	LINC02055	lncRNA	SENSE	ENSG00000254101	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr8:136362684-136362697	None
ERVLE_8q24.23c	HERV	ERVLE	internal	chr8	136382194	136386405	+	noncoding	LINC02055	lncRNA	SENSE	ENSG00000254101	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_8q24.23	HERV	HERVL	oneside	chr8	136522024	136524241	-	noncoding	LINC02055	lncRNA	ANTISENSE	ENSG00000254101	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q24.23d	HERV	ERVLE	internal	chr8	136530002	136532437	-	coding	LINC02055	lncRNA	ANTISENSE	ENSG00000254101	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q24.23g	HERV	ERV316A3	internal	chr8	136614064	136615514	-	noncoding	LINC02055	lncRNA	ANTISENSE	ENSG00000254101	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q24.23h	HERV	ERV316A3	internal	chr8	136631814	136633858	-	noncoding	LINC02055	lncRNA	ANTISENSE	ENSG00000254101	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q24.23i	HERV	ERV316A3	internal	chr8	136665105	136666044	-	noncoding	LINC02055	lncRNA	ANTISENSE	ENSG00000254101	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_8q24.23	HERV	HML3	prototype	chr8	136907873	136912851	-	noncoding	LINC02055	lncRNA	ANTISENSE	ENSG00000254101	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_8q24.23	HERV	MER41	internal	chr8	136912852	136916210	-	noncoding	LINC02055	lncRNA	ANTISENSE	ENSG00000254101	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q24.23e	HERV	ERVLE	internal	chr8	137051963	137055981	+	noncoding	LINC02055	lncRNA	SENSE	ENSG00000254101	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH48_8q24.23	HERV	HERVH48	prototype	chr8	137281320	137287809	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-144P	ENSG00000206678	175862	ZYXP1	ENSG00000274572	137095	None	None
ERV316A3_8q24.23j	HERV	ERV316A3	oneside	chr8	137355647	137357497	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-144P	ENSG00000206678	250189	ZYXP1	ENSG00000274572	67407	None	None
ERV316A3_8q24.23k	HERV	ERV316A3	oneside	chr8	137357786	137361566	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-144P	ENSG00000206678	252328	ZYXP1	ENSG00000274572	63338	None	None
HERVH_8q24.23b	HERV	HERVH	oneside	chr8	137409417	137413888	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZYXP1	ENSG00000274572	11016	RNU6-144P	ENSG00000206678	303959	None	None
HERVH_8q24.23c	HERV	HERVH	prototype	chr8	137824642	137830517	-	noncoding	AC046195.1	lncRNA	SENSE	ENSG00000253288	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV30_8q24.23	HERV	HERV30	oneside	chr8	137989057	137992203	+	noncoding	AC046195.1,AC046195.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000253288,ENSG00000254361	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_8q24.3	HERV	ERVL	prototype	chr8	138994354	138996020	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027541.1	ENSG00000253432	100285	COL22A1	ENSG00000169436	80313	None	None
ERVLE_8q24.3a	HERV	ERVLE	internal	chr8	139073996	139078985	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027541.1	ENSG00000253432	17320	COL22A1	ENSG00000169436	159955	None	None
ERVLB4_8q24.3a	HERV	ERVLB4	internal	chr8	139124441	139129844	-	noncoding	AC100807.2	lncRNA	SENSE	ENSG00000253783	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8q24.3a	HERV	ERV316A3	internal	chr8	139188905	139190614	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087354.1	ENSG00000254258	269448	AC100807.2	ENSG00000253783	60952	None	None
MER101_8q24.3a	HERV	MER101	oneside	chr8	139231692	139235895	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC100807.2	ENSG00000253783	103739	AC087354.1	ENSG00000254258	224167	None	None
ERV316A3_8q24.3b	HERV	ERV316A3	internal	chr8	139314647	139316830	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC100807.2	ENSG00000253783	186694	AC087354.1	ENSG00000254258	143232	None	None
ERV316A3_8q24.3c	HERV	ERV316A3	oneside	chr8	139334907	139336168	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC100807.2	ENSG00000253783	206954	AC087354.1	ENSG00000254258	123894	None	None
ERV316A3_8q24.3d	HERV	ERV316A3	internal	chr8	139375648	139376424	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087354.1	ENSG00000254258	83638	AC100807.2	ENSG00000253783	247695	None	None
ERVLE_8q24.3b	HERV	ERVLE	internal	chr8	139418840	139423026	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC100807.2	ENSG00000253783	290887	AC087354.1	ENSG00000254258	37036	None	None
HML2_8q24.3a	HERV	HML2	oneside	chr8	139459906	139462993	-	noncoding	AC087354.1	lncRNA	SENSE	ENSG00000254258	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q24.3c	HERV	ERVLE	internal	chr8	139470314	139471638	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087354.1	ENSG00000254258	7298	AC090093.1	ENSG00000275078	37063	None	None
ERVLE_8q24.3d	HERV	ERVLE	internal	chr8	139537075	139537738	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCNK9	ENSG00000169427	63100	AC090093.1	ENSG00000275078	28104	None	None
ERV316A3_8q24.3e	HERV	ERV316A3	internal	chr8	139544312	139545977	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090093.1	ENSG00000275078	35341	KCNK9	ENSG00000169427	54861	None	None
HERVE_8q24.3a	HERV	HERVE	oneside	chr8	139546318	139550370	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCNK9	ENSG00000169427	50468	AC090093.1	ENSG00000275078	37347	None	None
ERV316A3_8q24.3f	HERV	ERV316A3	internal	chr8	139550422	139551842	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090093.1	ENSG00000275078	41451	KCNK9	ENSG00000169427	48996	None	None
ERV316A3_8q24.3g	HERV	ERV316A3	oneside	chr8	139554094	139555635	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCNK9	ENSG00000169427	45203	AC090093.1	ENSG00000275078	45123	None	None
ERV316A3_8q24.3h	HERV	ERV316A3	oneside	chr8	139572151	139573202	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCNK9	ENSG00000169427	27636	AC090093.1	ENSG00000275078	63180	None	None
ERVLE_8q24.3e	HERV	ERVLE	internal	chr8	139621772	139622298	+	noncoding	KCNK9	protein_coding	ANTISENSE	ENSG00000169427	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_8q24.3a	HERV	MER4	internal	chr8	140315253	140316426	+	noncoding	TRAPPC9	protein_coding	ANTISENSE	ENSG00000167632	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q24.3f	HERV	ERVLE	internal	chr8	140501924	140503274	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRAPPC9	ENSG00000167632	43345	AC107375.1	ENSG00000259891	2539	None	None
ERV316A3_8q24.3i	HERV	ERV316A3	internal	chr8	142089081	142090451	+	noncoding	AC104417.2	lncRNA	SENSE	ENSG00000261710	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_8q24.3b	HERV	MER4	oneside	chr8	142642024	142646192	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	JRK	ENSG00000234616	11268	AC108002.2	ENSG00000277332	1376	None	None
MER4_8q24.3c	HERV	MER4	internal	chr8	142646410	142647273	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	JRK	ENSG00000234616	10187	AC108002.2	ENSG00000277332	5762	None	None
MER4_8q24.3d	HERV	MER4	oneside	chr8	142650773	142652750	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	JRK	ENSG00000234616	4710	AC108002.2	ENSG00000277332	10125	None	None
PABLA_8q24.3	HERV	PABLA	internal	chr8	142685011	142690795	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LY6K	ENSG00000160886	9316	PSCA	ENSG00000167653	2286	None	None
MER4_8q24.3e	HERV	MER4	oneside	chr8	142690798	142693659	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LY6K	ENSG00000160886	6452	PSCA	ENSG00000167653	8073	None	None
PABLB_8q24.3a	HERV	PABLB	internal	chr8	142721471	142723200	+	coding	LNCOC1	lncRNA	ANTISENSE	ENSG00000253741	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_8q24.3	HERV	HERVIP10FH	oneside	chr8	142730633	142733469	-	coding	THEM6	protein_coding	ANTISENSE	ENSG00000130193	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr8:142731962-142731992,chr8:142732660-142732729	chr8:142732669-142732684,chr8:142733014-142733018
MER101_8q24.3b	HERV	MER101	internal	chr8	142825520	142826021	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC083841.2	ENSG00000253715	13400	AC083841.3	ENSG00000253728	8117	None	None
MER101_8q24.3c	HERV	MER101	internal	chr8	142826329	142829911	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC083841.2	ENSG00000253715	14209	AC083841.3	ENSG00000253728	4227	None	None
ERVLB4_8q24.3b	HERV	ERVLB4	oneside	chr8	142867430	142870424	-	noncoding	GML	protein_coding	ANTISENSE	ENSG00000104499	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8q24.3c	HERV	ERVLB4	prototype	chr8	142899525	142903605	+	noncoding	GML	protein_coding	SENSE	ENSG00000104499	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_8q24.3	HERV	HERVL74	internal	chr8	142905294	142908509	+	noncoding	GML	protein_coding	SENSE	ENSG00000104499	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_8q24.3	HERV	MER41	oneside	chr8	142958887	142966057	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CYP11B2	ENSG00000179142	41044	LY6E-DT	ENSG00000247317	15681	None	None
PRIMA41_8q24.3	HERV	PRIMA41	internal	chr8	143050063	143053296	+	noncoding	C8orf31	lncRNA	SENSE	ENSG00000177335	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PABLB_8q24.3b	HERV	PABLB	internal	chr8	143062997	143065669	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC083982.1	ENSG00000243328	246	C8orf31	ENSG00000177335	2313	chr8:143063468-143063566	None
ERVLE_8q24.3g	HERV	ERVLE	internal	chr8	143102918	143105075	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LY6H	ENSG00000176956	52839	LY6L	ENSG00000261667	19917	None	None
MER4B_8q24.3	HERV	MER4B	internal	chr8	143108957	143114047	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LY6H	ENSG00000176956	43867	LY6L	ENSG00000261667	25956	None	None
HERV4_8q24.3	HERV	HERV4	oneside	chr8	143176341	143180015	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GPIHBP1	ENSG00000277494	33203	LY6H	ENSG00000176956	15630	None	chr8:143179549-143179550,chr8:143179637-143179646,chr8:143179675-143179684
HERVL_8q24.3a	HERV	HERVL	oneside	chr8	143195432	143196865	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LY6H	ENSG00000176956	34721	GPIHBP1	ENSG00000277494	16353	None	None
ERV316A3_8q24.3j	HERV	ERV316A3	internal	chr8	143664486	143665455	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF707	ENSG00000181135	18997	ZNF623	ENSG00000183309	8068	None	None
HARLEQUIN_8q24.3	HERV	HARLEQUIN	oneside	chr8	143675468	143680387	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF623	ENSG00000183309	19050	ZNF707	ENSG00000181135	4065	None	None
ERVLB4_8q24.3d	HERV	ERVLB4	internal	chr8	143744356	143745392	-	noncoding	IQANK1	protein_coding	ANTISENSE	ENSG00000203499	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q24.3h	HERV	ERVLE	internal	chr8	143755107	143760187	-	noncoding	IQANK1,AC105219.4	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000203499,ENSG00000254973	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8q24.3i	HERV	ERVLE	internal	chr8	143911304	143912821	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC109322.2	ENSG00000288096	9716	PLEC	ENSG00000178209	2326	None	None
ERV316A3_8q24.3k	HERV	ERV316A3	oneside	chr8	144856421	144858292	+	noncoding	AF235103.3	lncRNA	ANTISENSE	ENSG00000286681	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
LTR46_8q24.3	HERV	LTR46	prototype	chr8	144858831	144868579	-	noncoding	AF235103.3	lncRNA	SENSE	ENSG00000286681	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr8:144860034-144860231	None
HERVL_8q24.3b	HERV	HERVL	oneside	chr8	144868593	144871050	+	noncoding	AF235103.3	lncRNA	ANTISENSE	ENSG00000286681	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_8q24.3	HERV	HML3	oneside	chr8	144871051	144873813	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF235103.3	ENSG00000286681	1562	ZNF250	ENSG00000196150	2684	None	None
HERVH_8q24.3	HERV	HERVH	prototype	chr8	144953919	144959998	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF252P	ENSG00000196922	13591	ZNF16	ENSG00000170631	3031	None	None
ERVLE_8q24.3j	HERV	ERVLE	internal	chr8	144970428	144972623	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF252P	ENSG00000196922	966	ZNF16	ENSG00000170631	19540	None	None
HERVK14C_8q24.3a	HERV	HERVK14C	internal	chr8	145019967	145021243	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF252P-AS1	ENSG00000255559	13921	AC139103.1	ENSG00000255000	26617	None	None
HML2_8q24.3b	HERV	HML2	prototype	chr8	145021244	145028834	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC139103.1	ENSG00000255000	19026	ZNF252P-AS1	ENSG00000255559	15198	None	chr8:145027973-145027976
HERVK14C_8q24.3b	HERV	HERVK14C	oneside	chr8	145028836	145032719	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF252P-AS1	ENSG00000255559	22790	AC139103.1	ENSG00000255000	15141	None	None
HML4_8q24.3	HERV	HML4	prototype	chr8	145055126	145066800	+	coding	C8orf33	protein_coding	SENSE	ENSG00000182307	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr8:145056179-145056513	None
HERVE_8q24.3b	HERV	HERVE	oneside	chr8	145069366	145072029	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	C8orf33	ENSG00000182307	2681	None	None
ERV316A3_9p24.3a	HERV	ERV316A3	internal	chr9	1239670	1240853	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358934.1	ENSG00000233575	87811	RPS27AP14	ENSG00000236594	74803	None	None
ERV316A3_9p24.3b	HERV	ERV316A3	oneside	chr9	1267075	1269356	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS27AP14	ENSG00000236594	102208	AL358934.1	ENSG00000233575	59308	None	None
ERV316A3_9p24.3c	HERV	ERV316A3	prototype	chr9	1377207	1383310	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP279	ENSG00000202383	43254	AL358053.1	ENSG00000287465	157011	None	None
ERV316A3_9p24.3d	HERV	ERV316A3	prototype	chr9	1526655	1530079	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358053.1	ENSG00000287465	10242	RNA5SP279	ENSG00000202383	192702	None	None
HERVL_9p24.3	HERV	HERVL	oneside	chr9	1623443	1624821	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358053.1	ENSG00000287465	73340	AL591644.1	ENSG00000224092	352963	None	None
ERVLE_9p24.3	HERV	ERVLE	internal	chr9	1773300	1777475	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591644.1	ENSG00000224092	200309	AL358053.1	ENSG00000287465	223197	None	None
HERVH_9p24.2a	HERV	HERVH	prototype	chr9	2275706	2281524	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL592P	ENSG00000264615	46465	VLDLR-AS1	ENSG00000236404	140073	chr9:2279055-2279435	None
ERVLE_9p24.2a	HERV	ERVLE	internal	chr9	2341039	2343561	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL592P	ENSG00000264615	111798	VLDLR-AS1	ENSG00000236404	78036	chr9:2342997-2343103	None
HERVH_9p24.2b	HERV	HERVH	prototype	chr9	2509687	2515547	+	noncoding	VLDLR-AS1	lncRNA	ANTISENSE	ENSG00000236404	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:2514203-2514223	None
ERV316A3_9p24.2a	HERV	ERV316A3	prototype	chr9	2849984	2853160	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GPS2P1	ENSG00000236496	22282	PUM3	ENSG00000080608	5889	None	None
ERVLE_9p24.2b	HERV	ERVLE	internal	chr9	2936130	2937740	+	noncoding	CARM1P1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000227835	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_9p24.2	HERV	HUERSP3	oneside	chr9	3085082	3088650	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CARM1P1	ENSG00000227835	31674	LINC01231	ENSG00000236511	92692	None	None
ERVLE_9p24.2c	HERV	ERVLE	internal	chr9	3214883	3215793	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01231	ENSG00000236511	14438	RFX3	ENSG00000080298	2504	None	None
ERV316A3_9p24.2b	HERV	ERV316A3	oneside	chr9	3595086	3597037	+	noncoding	RFX3-AS1	lncRNA	SENSE	ENSG00000232104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_9p24.2c	HERV	HERVH	prototype	chr9	3810901	3816765	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GLIS3	ENSG00000107249	7362	RFX3-AS1	ENSG00000232104	119087	None	None
ERVLE_9p24.1a	HERV	ERVLE	internal	chr9	4689689	4691080	-	noncoding	CDC37L1	protein_coding	ANTISENSE	ENSG00000106993	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_9p24.1	HERV	HML5	prototype	chr9	5228602	5231041	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133547.1	ENSG00000237553	35044	INSL4	ENSG00000120211	378	None	None
HERVL40_9p24.1a	HERV	HERVL40	prototype	chr9	5427701	5430265	+	noncoding	PLGRKT	protein_coding	ANTISENSE	ENSG00000107020	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_9p24.1	HERV	ERV316A3	prototype	chr9	5551314	5552634	-	noncoding	AL162253.2,PDCD1LG2	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000286162,ENSG00000197646	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:5552355-5552554	None
HERVL_9p24.1a	HERV	HERVL	oneside	chr9	5738653	5740868	-	noncoding	RIC1	protein_coding	ANTISENSE	ENSG00000107036	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_9p24.1	HERV	HERVH	oneside	chr9	6020021	6022201	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RANBP6	ENSG00000137040	4396	AL162384.1	ENSG00000228739	25159	None	chr9:6020363-6020368
HERVI_9p24.1	HERV	HERVI	prototype	chr9	6078708	6087859	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL162384.1	ENSG00000228739	11994	GTF3AP1	ENSG00000237274	108075	None	chr9:6080282-6080284
HERVL_9p24.1b	HERV	HERVL	prototype	chr9	6099162	6105557	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL162384.1	ENSG00000228739	32448	GTF3AP1	ENSG00000237274	90377	None	None
ERVLB4_9p24.1a	HERV	ERVLB4	oneside	chr9	6145050	6150850	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GTF3AP1	ENSG00000237274	45084	AL162384.1	ENSG00000228739	78336	None	None
ERVLB4_9p24.1b	HERV	ERVLB4	internal	chr9	6360840	6362691	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UHRF2	ENSG00000147854	50460	TPD52L3	ENSG00000170777	28940	None	None
MER61_9p24.1a	HERV	MER61	oneside	chr9	6371399	6374199	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UHRF2	ENSG00000147854	38952	TPD52L3	ENSG00000170777	39499	None	None
MER61_9p24.1b	HERV	MER61	oneside	chr9	6382449	6385022	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UHRF2	ENSG00000147854	28129	TPD52L3	ENSG00000170777	50549	chr9:6384866-6385180	None
ERVLE_9p24.1b	HERV	ERVLE	internal	chr9	6652653	6654143	+	noncoding	AL162411.1	lncRNA	SENSE	ENSG00000236924	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_9p24.1c	HERV	ERVLE	internal	chr9	7439458	7441804	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL157703.1	ENSG00000288042	95902	RPL4P5	ENSG00000230207	35241	None	None
ERVLE_9p24.1d	HERV	ERVLE	oneside	chr9	7614201	7621491	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP33	ENSG00000178654	15824	AL354694.1	ENSG00000273056	164614	None	None
HERVL18_9p24.1	HERV	HERVL18	prototype	chr9	7785466	7791928	-	noncoding	AL354694.1	lncRNA	SENSE	ENSG00000273056	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_9p24.1b	HERV	HERVL40	oneside	chr9	7828379	7833016	-	noncoding	DMAC1	protein_coding	SENSE	ENSG00000137038	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:7829724-7830044	None
MER41_9p24.1a	HERV	MER41	internal	chr9	7847581	7850466	+	noncoding	DMAC1	protein_coding	ANTISENSE	ENSG00000137038	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_9p24.1	HERV	HERVW	oneside	chr9	8747224	8748523	+	noncoding	PTPRD	protein_coding	ANTISENSE	ENSG00000153707	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_9p24.1b	HERV	MER41	prototype	chr9	8823730	8826094	-	noncoding	PTPRD	protein_coding	SENSE	ENSG00000153707	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_9p23	HERV	HERVL18	prototype	chr9	9557783	9561261	-	noncoding	PTPRD	protein_coding	SENSE	ENSG00000153707	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_9p23a	HERV	ERVLB4	internal	chr9	9834296	9836533	+	noncoding	PTPRD	protein_coding	ANTISENSE	ENSG00000153707	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_9p23a	HERV	ERVLE	internal	chr9	9951185	9952995	+	noncoding	PTPRD	protein_coding	ANTISENSE	ENSG00000153707	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_9p23	HERV	HUERSP2	oneside	chr9	9989179	9990546	+	noncoding	PTPRD	protein_coding	ANTISENSE	ENSG00000153707	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_9p23	HERV	HUERSP3	prototype	chr9	9997607	10001203	+	noncoding	PTPRD	protein_coding	ANTISENSE	ENSG00000153707	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_9p23b	HERV	ERVLE	internal	chr9	10678800	10681294	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161788.1	ENSG00000227138	96063	AL135790.1	ENSG00000232035	46597	None	None
ERV316A3_9p23a	HERV	ERV316A3	internal	chr9	10699447	10703017	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161788.1	ENSG00000227138	74340	AL135790.1	ENSG00000232035	67244	None	chr9:10702142-10702182
ERVLE_9p23c	HERV	ERVLE	internal	chr9	10784565	10786591	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IMP3P1	ENSG00000230589	43161	AL161788.1	ENSG00000227138	7040	None	None
HERVL_9p23a	HERV	HERVL	oneside	chr9	10793845	10798390	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IMP3P1	ENSG00000230589	31362	AL161788.1	ENSG00000227138	16320	None	None
HERVH_9p23a	HERV	HERVH	prototype	chr9	10884982	10890804	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IMP3P1	ENSG00000230589	54674	AL162413.1	ENSG00000270372	57568	None	None
HERVL_9p23b	HERV	HERVL	internal	chr9	10959659	10962281	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL162413.1	ENSG00000270372	11178	AKAP8P1	ENSG00000234146	49467	None	None
LTR19_9p23	HERV	LTR19	prototype	chr9	11229119	11235465	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL451129.1	ENSG00000230365	39849	AKAP8P1	ENSG00000234146	216023	None	None
HML5_9p23	HERV	HML5	prototype	chr9	11254387	11260606	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL451129.1	ENSG00000230365	14708	AKAP8P1	ENSG00000234146	241291	None	None
LTR25_9p23a	HERV	LTR25	internal	chr9	11267532	11270411	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL451129.1	ENSG00000230365	4903	AKAP8P1	ENSG00000234146	254436	None	None
LTR25_9p23b	HERV	LTR25	internal	chr9	11274284	11275260	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AKAP8P1	ENSG00000234146	261188	AL451129.1	ENSG00000230365	54	None	None
MER61_9p23	HERV	MER61	prototype	chr9	11302939	11309057	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL451129.1	ENSG00000230365	26625	AL355672.1	ENSG00000286474	4340	None	None
ERVLB4_9p23b	HERV	ERVLB4	internal	chr9	11329386	11331879	-	noncoding	AL355672.1	lncRNA	ANTISENSE	ENSG00000286474	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_9p23c	HERV	ERVLB4	internal	chr9	11412952	11416284	+	noncoding	AL355672.1	lncRNA	SENSE	ENSG00000286474	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_9p23b	HERV	ERV316A3	oneside	chr9	11450091	11455492	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355672.1	ENSG00000286474	13847	AL592227.1	ENSG00000275130	163004	None	None
PRIMAX_9p23	HERV	PRIMAX	internal	chr9	11489356	11489911	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL592227.1	ENSG00000275130	128585	AL355672.1	ENSG00000286474	53112	None	None
ERV316A3_9p23c	HERV	ERV316A3	internal	chr9	11547963	11548988	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355672.1	ENSG00000286474	111719	AL592227.1	ENSG00000275130	69508	None	None
ERV316A3_9p23d	HERV	ERV316A3	internal	chr9	11551528	11552913	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355672.1	ENSG00000286474	115284	AL592227.1	ENSG00000275130	65583	None	None
MER4_9p23a	HERV	MER4	oneside	chr9	12137662	12139146	+	noncoding	AL589678.1	lncRNA	ANTISENSE	ENSG00000224935	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_9p23b	HERV	MER4	oneside	chr9	12139224	12145019	+	noncoding	AL589678.1	lncRNA	ANTISENSE	ENSG00000224935	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_9p23e	HERV	ERV316A3	internal	chr9	12525359	12525930	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU2-47P	ENSG00000222581	224908	TYRP1	ENSG00000107165	159509	None	None
ERVLB4_9p23d	HERV	ERVLB4	internal	chr9	12853795	12854637	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LURAP1L	ENSG00000153714	30735	AL353711.1	ENSG00000222658	30684	None	None
HERVH_9p23b	HERV	HERVH	prototype	chr9	12948345	12954128	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353711.1	ENSG00000222658	62928	AL161449.2	ENSG00000285637	4375	None	chr9:12948721-12948725
ERV316A3_9p23f	HERV	ERV316A3	oneside	chr9	13761576	13766637	-	noncoding	AL583785.1	lncRNA	ANTISENSE	ENSG00000226197	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_9p23g	HERV	ERV316A3	prototype	chr9	14002586	14006016	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL360089.1	ENSG00000235533	19955	PES1P2	ENSG00000229268	14677	None	None
HUERSP3B_9p22.3	HERV	HUERSP3B	prototype	chr9	14830619	14837443	+	noncoding	FREM1	protein_coding	ANTISENSE	ENSG00000164946	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_9p22.3	HERV	MER41	prototype	chr9	14891955	14896263	+	noncoding	FREM1	protein_coding	ANTISENSE	ENSG00000164946	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_9p22.3	HERV	MER4B	internal	chr9	15371652	15373640	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P33	ENSG00000215236	9518	SNAPC3	ENSG00000164975	49064	None	None
ERVLE_9p22.3a	HERV	ERVLE	internal	chr9	15711817	15715259	-	noncoding	CCDC171	protein_coding	ANTISENSE	ENSG00000164989	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_9p22.3	HERV	ERV316A3	insert*	chr9	15996998	15998695	-	noncoding	CCDC171	protein_coding	ANTISENSE	ENSG00000164989	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_9p22.3b	HERV	ERVLE	internal	chr9	16111273	16112772	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C9orf92	ENSG00000205549	91163	CCDC171	ENSG00000164989	49610	None	None
ERVLE_9p22.3c	HERV	ERVLE	internal	chr9	16115616	16118399	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C9orf92	ENSG00000205549	85536	CCDC171	ENSG00000164989	53953	None	None
ERV316A3_9p22.2	HERV	ERV316A3	internal	chr9	17007471	17008023	+	noncoding	AL162725.2	lncRNA	SENSE	ENSG00000237153	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL66_9p22.2	HERV	HERVL66	oneside	chr9	17205490	17207343	+	noncoding	CNTLN	protein_coding	SENSE	ENSG00000044459	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_9p22.2	HERV	ERVLE	internal	chr9	17403055	17404576	+	noncoding	CNTLN	protein_coding	SENSE	ENSG00000044459	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_9p22.2	HERV	ERVLB4	oneside	chr9	17508846	17510797	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CNTLN	ENSG00000044459	4923	SH3GL2	ENSG00000107295	68269	None	None
ERVLE_9p22.1	HERV	ERVLE	internal	chr9	19841678	19842732	+	noncoding	AL158077.2	lncRNA	SENSE	ENSG00000286685	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_9p21.3	HERV	HERVL74	internal	chr9	20513947	20515367	-	noncoding	MLLT3	protein_coding	SENSE	ENSG00000171843	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_9p21.3	HERV	MER41	oneside	chr9	20593281	20595047	+	noncoding	MLLT3	protein_coding	ANTISENSE	ENSG00000171843	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_9p21.3a	HERV	HERVFRD	oneside	chr9	21255271	21259405	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IFNA14	ENSG00000228083	15266	IFNA22P	ENSG00000224416	18645	None	None
MER34B_9p21.3a	HERV	MER34B	internal	chr9	21378993	21379976	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IFNA2	ENSG00000188379	4279	IFNA13	ENSG00000233816	10031	None	None
HERVH_9p21.3a	HERV	HERVH	prototype	chr9	21487323	21491080	-	noncoding	MIR31HG	lncRNA	SENSE	ENSG00000171889	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:21487976-21488390	chr9:21488380-21488390
HERVL_9p21.3a	HERV	HERVL	prototype	chr9	21846888	21852044	+	noncoding	AL359922.1,MTAP	protein_coding,protein_coding	SENSE,SENSE	ENSG00000264545,ENSG00000099810	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_9p21.3b	HERV	HERVFRD	prototype	chr9	21921892	21931935	+	noncoding	AL359922.1,MTAP,ERVFRD-3	protein_coding,protein_coding,transcribed_processed_pseudogene	SENSE,SENSE,SENSE	ENSG00000264545,ENSG00000099810,ENSG00000264801	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
MER34B_9p21.3b	HERV	MER34B	unknown	chr9	21933111	21940551	+	noncoding	AL359922.1,MTAP	protein_coding,protein_coding	SENSE,SENSE	ENSG00000264545,ENSG00000099810	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_9p21.3a	HERV	ERVLB4	oneside	chr9	22321644	22323283	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL157937.1	ENSG00000236921	106972	DMRTA1	ENSG00000176399	123541	None	None
ERVLE_9p21.3a	HERV	ERVLE	internal	chr9	22456354	22460565	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01239	ENSG00000234840	185635	DMRTA1	ENSG00000176399	614	None	None
HERVH_9p21.3b	HERV	HERVH	prototype	chr9	22658527	22664062	-	noncoding	LINC01239	lncRNA	ANTISENSE	ENSG00000234840	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_9p21.3	HERV	ERV316A3	prototype	chr9	22690572	22693784	-	noncoding	LINC01239	lncRNA	ANTISENSE	ENSG00000234840	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_9p21.3b	HERV	HERVL	prototype	chr9	22830491	22834729	+	noncoding	AL391117.1	lncRNA	ANTISENSE	ENSG00000284418	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_9p21.3b	HERV	ERVLB4	oneside	chr9	22889379	22892497	+	noncoding	AL391117.1	lncRNA	ANTISENSE	ENSG00000284418	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_9p21.3b	HERV	ERVLE	internal	chr9	22981507	22982376	-	noncoding	AL391117.1	lncRNA	SENSE	ENSG00000284418	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_9p21.3	HERV	HERV9	prototype	chr9	23916281	23926439	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL365204.3	ENSG00000277608	29321	AL365204.2	ENSG00000237414	18227	None	None
MER61_9p21.3	HERV	MER61	prototype	chr9	23940967	23946863	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL365204.3	ENSG00000277608	8897	AL365204.2	ENSG00000237414	42913	None	None
ERVLB4_9p21.3c	HERV	ERVLB4	internal	chr9	24445476	24449212	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IZUMO3	ENSG00000205442	93740	AL513317.1	ENSG00000287139	357425	None	None
ERVLE_9p21.3c	HERV	ERVLE	internal	chr9	24770169	24772610	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RMRPP5	ENSG00000223088	132859	AL353811.1	ENSG00000269957	178065	None	None
HERVL_9p21.3c	HERV	HERVL	oneside	chr9	25125775	25127237	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL353730.1	ENSG00000287318	452420	RN7SKP120	ENSG00000222693	36624	None	None
HERVH_9p21.3c	HERV	HERVH	prototype	chr9	25288176	25294101	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP120	ENSG00000222693	199025	AL353730.1	ENSG00000287318	285556	None	None
HERVL_9p21.2a	HERV	HERVL	oneside	chr9	25626486	25627729	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353730.1	ENSG00000287318	42214	TUSC1	ENSG00000198680	48660	None	None
HERVH_9p21.2a	HERV	HERVH	prototype	chr9	25668929	25675217	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353730.1	ENSG00000287318	84657	TUSC1	ENSG00000198680	1172	None	None
ERVLE_9p21.2a	HERV	ERVLE	internal	chr9	25819416	25821317	-	noncoding	LINC01241	lncRNA	ANTISENSE	ENSG00000236306	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_9p21.2b	HERV	ERVLE	internal	chr9	25833507	25834222	-	noncoding	LINC01241	lncRNA	ANTISENSE	ENSG00000236306	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_9p21.2	HERV	MER4	prototype	chr9	25847555	25854537	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01241	ENSG00000236306	2970	FAM71BP1	ENSG00000270683	83375	None	None
HUERSP3B_9p21.2	HERV	HUERSP3B	prototype	chr9	25959679	25965722	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353753.1	ENSG00000276759	100953	FAM71BP1	ENSG00000270683	21245	None	None
HERVH_9p21.2b	HERV	HERVH	prototype	chr9	25994640	26000000	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM71BP1	ENSG00000270683	56206	AL353753.1	ENSG00000276759	66675	None	None
HERVL_9p21.2b	HERV	HERVL	oneside	chr9	26105098	26111016	+	noncoding	AL353753.1	lncRNA	SENSE	ENSG00000276759	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_9p21.2a	HERV	HERVIP10F	internal	chr9	26970780	26972490	-	noncoding	IFT74	protein_coding	ANTISENSE	ENSG00000096872	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_9p21.2b	HERV	HERVIP10F	oneside	chr9	26972599	26976760	-	noncoding	IFT74	protein_coding	ANTISENSE	ENSG00000096872	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chr9:26975718-26975876	chr9:26976392-26976407
ERV316A3_9p21.2	HERV	ERV316A3	oneside	chr9	27305480	27307073	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MOB3B	ENSG00000120162	18136	EQTN	ENSG00000120160	8330	None	None
HERVL_9p21.2c	HERV	HERVL	prototype	chr9	27637123	27643901	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTAGE12P	ENSG00000215441	26378	AL360014.1	ENSG00000260390	185375	None	None
LTR46_9p21.2	HERV	LTR46	oneside	chr9	27805167	27809633	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL360014.1	ENSG00000260390	19643	CTAGE12P	ENSG00000215441	194422	None	None
ERV316A3_9p21.1a	HERV	ERV316A3	oneside	chr9	28375244	28376757	+	noncoding	LINGO2	protein_coding	ANTISENSE	ENSG00000174482	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_9p21.1a	HERV	HERVL	prototype	chr9	28510729	28513083	-	coding	LINGO2	protein_coding	SENSE	ENSG00000174482	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV4_9p21.1	HERV	HERV4	internal	chr9	29130143	29131215	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR873	ENSG00000215939	241188	AL162388.2	ENSG00000287038	83107	None	None
ERVLE_9p21.1	HERV	ERVLE	prototype	chr9	29243978	29247454	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL162388.2	ENSG00000287038	14749	AL162388.1	ENSG00000230276	6621	None	None
ERV316A3_9p21.1b	HERV	ERV316A3	prototype	chr9	29256595	29262339	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353684.1	ENSG00000277646	55494	AL162388.1	ENSG00000230276	2169	None	None
HARLEQUIN_9p21.1	HERV	HARLEQUIN	prototype	chr9	29377118	29384677	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL353684.1	ENSG00000277646	58166	AL354676.1	ENSG00000229834	251809	None	None
ERVLB4_9p21.1a	HERV	ERVLB4	oneside	chr9	29511499	29513889	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353684.1	ENSG00000277646	192547	AL354676.1	ENSG00000229834	122597	None	None
MER41_9p21.1a	HERV	MER41	prototype	chr9	29547094	29554598	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353684.1	ENSG00000277646	228142	AL354676.1	ENSG00000229834	81888	None	None
HML1_9p21.1a	HERV	HML1	oneside	chr9	29655117	29656339	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ME2P1	ENSG00000230097	168403	AL354676.1	ENSG00000229834	18264	None	None
HERVW_9p21.1a	HERV	HERVW	internal	chr9	29656327	29658927	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ME2P1	ENSG00000230097	165815	AL354676.1	ENSG00000229834	19474	None	None
HML1_9p21.1b	HERV	HML1	oneside	chr9	29658988	29660160	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ME2P1	ENSG00000230097	164582	AL354676.1	ENSG00000229834	22135	None	None
ERVL_9p21.1	HERV	ERVL	internal	chr9	29750637	29752071	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ME2P1	ENSG00000230097	72671	AL354676.1	ENSG00000229834	113784	None	None
HML1_9p21.1c	HERV	HML1	oneside	chr9	29775513	29776757	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ME2P1	ENSG00000230097	47985	AL354676.1	ENSG00000229834	138660	None	None
HERVW_9p21.1b	HERV	HERVW	internal	chr9	29776759	29779438	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ME2P1	ENSG00000230097	45304	AL354676.1	ENSG00000229834	139906	None	None
HML1_9p21.1d	HERV	HML1	oneside	chr9	29779508	29780677	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ME2P1	ENSG00000230097	44065	AL354676.1	ENSG00000229834	142655	None	None
MER101_9p21.1	HERV	MER101	oneside	chr9	29984333	29987281	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01242	ENSG00000280683	401654	ME2P1	ENSG00000230097	157622	None	None
HERVL_9p21.1b	HERV	HERVL	oneside	chr9	30087121	30090036	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01242	ENSG00000280683	298899	ME2P1	ENSG00000230097	260410	None	None
HERVL18_9p21.1	HERV	HERVL18	prototype	chr9	30197986	30201455	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ME2P1	ENSG00000230097	371275	LINC01242	ENSG00000280683	187480	None	None
ERVLB4_9p21.1b	HERV	ERVLB4	internal	chr9	30298873	30307700	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ME2P1	ENSG00000230097	472162	LINC01242	ENSG00000280683	81235	None	None
ERV316A3_9p21.1c	HERV	ERV316A3	oneside	chr9	30472901	30474045	-	noncoding	LINC01242	lncRNA	SENSE	ENSG00000280683	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_9p21.1d	HERV	ERV316A3	internal	chr9	30560066	30562320	-	noncoding	LINC01242	lncRNA	SENSE	ENSG00000280683	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_9p21.1	HERV	MER61	prototype	chr9	30851131	30855785	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS26P2	ENSG00000233278	18906	FTLP4	ENSG00000214020	79700	None	None
MER34B_9p21.1	HERV	MER34B	internal	chr9	31239333	31240265	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC25A6P2	ENSG00000232203	13636	AL354854.1	ENSG00000223421	72353	None	None
HERVH_9p21.1a	HERV	HERVH	prototype	chr9	31326307	31334697	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC25A6P2	ENSG00000232203	71530	LINC01243	ENSG00000260720	36914	None	None
MER41_9p21.1b	HERV	MER41	prototype	chr9	31464241	31470347	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTATP6P30	ENSG00000226998	34933	LINC01243	ENSG00000260720	82751	None	None
ERV316A3_9p21.1e	HERV	ERV316A3	oneside	chr9	31697885	31699269	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP281	ENSG00000252313	594289	HMGB3P23	ENSG00000235148	52725	None	None
HERVK11_9p21.1	HERV	HERVK11	oneside	chr9	31770537	31778849	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P23	ENSG00000235148	125377	RNA5SP281	ENSG00000252313	514709	None	None
HUERSP2_9p21.1	HERV	HUERSP2	prototype	chr9	31807545	31809731	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP281	ENSG00000252313	483827	HMGB3P23	ENSG00000235148	162385	None	None
HERVL_9p21.1c	HERV	HERVL	oneside	chr9	32145867	32147331	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P23	ENSG00000235148	500707	RNA5SP281	ENSG00000252313	146227	None	None
HERVH_9p21.1b	HERV	HERVH	oneside	chr9	32164364	32169199	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP281	ENSG00000252313	124359	HMGB3P23	ENSG00000235148	519204	None	None
HERVL_9p21.1d	HERV	HERVL	oneside	chr9	32352869	32355206	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ACO1	ENSG00000122729	29397	SLC25A5P8	ENSG00000225347	18515	None	None
HERVL40_9p21.1	HERV	HERVL40	prototype	chr9	32371344	32377156	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ACO1	ENSG00000122729	7447	SLC25A5P8	ENSG00000225347	36990	None	None
HERVL_9p21.1e	HERV	HERVL	oneside	chr9	32859846	32860940	-	noncoding	AL157884.3	unprocessed_pseudogene	SENSE	ENSG00000236796	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_9p13.3a	HERV	MER41	prototype	chr9	33703617	33708862	+	noncoding	AL356489.3	lncRNA	SENSE	ENSG00000287063	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr9:33705076-33705103	None
ERVLB4_9p13.3	HERV	ERVLB4	oneside	chr9	33740523	33743641	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRSS3	ENSG00000010438	6825	LINC01251	ENSG00000233776	2107	None	None
ERVLE_9p13.3a	HERV	ERVLE	internal	chr9	33787122	33788777	+	noncoding	PRSS3,UBE2R2-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000010438,ENSG00000235481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_9p13.3a	HERV	ERV316A3	oneside	chr9	34158413	34168326	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBAP1	ENSG00000165006	10679	AL354989.2	ENSG00000239392	23717	chr9:34158492-34158841	None
ERVLE_9p13.3b	HERV	ERVLE	internal	chr9	34696650	34699468	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCL19	ENSG00000172724	5374	AL162231.5	ENSG00000288583	3485	None	None
ERV316A3_9p13.3b	HERV	ERV316A3	prototype	chr9	34939323	34945492	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PHF24	ENSG00000122733	12116	YWHAZP6	ENSG00000215199	16402	None	None
HERVH_9p13.3a	HERV	HERVH	prototype	chr9	35003293	35009333	+	noncoding	AL355377.2	TEC	SENSE	ENSG00000279489	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_9p13.3a	HERV	MER4	oneside	chr9	35012292	35020722	-	noncoding	AL355377.3	lncRNA	SENSE	ENSG00000286782	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_9p13.3b	HERV	HERVH	oneside	chr9	35020808	35025134	-	noncoding	AL355377.4	lncRNA	SENSE	ENSG00000287868	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_9p13.3b	HERV	MER4	oneside	chr9	35025135	35028325	-	noncoding	AL355377.4	lncRNA	SENSE	ENSG00000287868	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr9:35027514-35027522
MER4_9p13.3c	HERV	MER4	prototype	chr9	35126085	35134140	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FAM214B	ENSG00000005238	9744	AL353795.1	ENSG00000215198	13270	None	None
MER41_9p13.3b	HERV	MER41	oneside	chr9	35135993	35138122	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353795.1	ENSG00000215198	9288	FAM214B	ENSG00000005238	19652	None	None
LTR19_9p13.3	HERV	LTR19	internal	chr9	35142507	35144331	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM214B	ENSG00000005238	26166	AL353795.1	ENSG00000215198	3079	None	None
LTR25_9p13.3	HERV	LTR25	internal	chr9	35149628	35150675	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353795.1	ENSG00000215198	444	UNC13B	ENSG00000198722	11317	None	None
HERVH_9p13.3c	HERV	HERVH	prototype	chr9	35151223	35156610	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UNC13B	ENSG00000198722	5382	AL353795.1	ENSG00000215198	2039	chr9:35153451-35153472	None
MER4B_9p13.3	HERV	MER4B	internal	chr9	35156611	35159715	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UNC13B	ENSG00000198722	2277	AL353795.1	ENSG00000215198	7427	chr9:35159715-35159732	None
MER4_9p13.3d	HERV	MER4	internal	chr9	35159754	35161206	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UNC13B	ENSG00000198722	786	AL353795.1	ENSG00000215198	10570	None	None
HUERSP3B_9p13.3a	HERV	HUERSP3B	oneside	chr9	35186447	35191289	-	noncoding	UNC13B	protein_coding	ANTISENSE	ENSG00000198722	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_9p13.3b	HERV	HUERSP3B	oneside	chr9	35191709	35195348	-	noncoding	UNC13B	protein_coding	ANTISENSE	ENSG00000198722	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr9:35194944-35194955
HERVIP10FH_9p13.3	HERV	HERVIP10FH	prototype	chr9	35455417	35462089	-	noncoding	ATP8B5P	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000179766	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_9p13.3	HERV	HML3	oneside	chr9	35581973	35585343	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM166B	ENSG00000215187	18074	RPS29P17	ENSG00000227852	7443	None	None
HERVH_9p13.3d	HERV	HERVH	oneside	chr9	35636819	35639025	+	noncoding	CD72	protein_coding	ANTISENSE	ENSG00000137101	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_9p13.3	HERV	HERVW	oneside	chr9	35640305	35642827	-	noncoding	CD72,AL357874.2	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000137101,ENSG00000231393	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_9p13.3c	HERV	ERVLE	internal	chr9	36016207	36017155	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR2AM1P	ENSG00000236110	4537	OR2S1P	ENSG00000228307	1584	None	None
ERVLE_9p13.1a	HERV	ERVLE	oneside	chr9	38245321	38247003	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL135785.1	ENSG00000223716	113424	AL161448.1	ENSG00000200026	97760	None	None
ERVLE_9p13.1b	HERV	ERVLE	internal	chr9	38429841	38431382	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGFBPL1	ENSG00000137142	5387	AL390726.5	ENSG00000283162	2314	None	None
ERVLB4_9p13.1	HERV	ERVLB4	oneside	chr9	38807814	38808901	-	noncoding	AL845311.1	lncRNA	ANTISENSE	ENSG00000228467	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_9p13.1	HERV	MER4B	internal	chr9	38914191	38915623	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL953883.1	ENSG00000287838	34111	AL845311.1	ENSG00000228467	62275	None	None
ERVLB4_9p12	HERV	ERVLB4	prototype	chr9	39706606	39714266	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATP5F1AP8	ENSG00000234720	51075	RAB28P1	ENSG00000226108	20404	None	None
LTR25_9p12	HERV	LTR25	internal	chr9	39930352	39936362	-	coding	FGF7P3	transcribed_unprocessed_pseudogene	SENSE	ENSG00000204837	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_9p11.2	HERV	HERVL	prototype	chr9	40636832	40640838	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGKV1OR9-2	ENSG00000225380	1003	FP325318.1	ENSG00000276266	14677	None	None
HERVIP10F_9p11.2	HERV	HERVIP10F	prototype	chr9	40746808	40755339	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353626.3	ENSG00000276963	68	IGKV1OR9-2	ENSG00000225380	104691	None	None
ERV316A3_9p11.2	HERV	ERV316A3	oneside	chr9	40798717	40801235	+	noncoding	AL353626.1	lncRNA	SENSE	ENSG00000275390	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
LTR25_9p11.2a	HERV	LTR25	internal	chr9	41527165	41528301	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL354718.1	ENSG00000275160	46617	AL591926.4	ENSG00000277340	44855	None	None
LTR25_9p11.2b	HERV	LTR25	internal	chr9	41528626	41533198	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL354718.1	ENSG00000275160	48078	AL591926.4	ENSG00000277340	39958	None	None
HERVH_9p11.2	HERV	HERVH	prototype	chr9	41631249	41634104	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591926.9	ENSG00000288225	10334	RN7SL565P	ENSG00000276562	52063	None	None
HERVL_9p11.1	HERV	HERVL	prototype	chr9	42464635	42472317	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ATP5F1AP1	ENSG00000234861	52485	RAB28P3	ENSG00000227353	20346	None	None
HERVL_9q11	HERV	HERVL	oneside	chr9	43267871	43270940	-	NA	None	NA	NA	None	INTERGENIC	NA	NA	BX088702.1	ENSG00000277598	17275980	ABBA01045074.1	ENSG00000286916	22884	None	None
ERVLB4_9q12	HERV	ERVLB4	prototype	chr9	60756914	60764572	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPATA31A5	ENSG00000276581	149802	BX088702.1	ENSG00000277598	209760	None	None
ERVLE_9q13	HERV	ERVLE	internal	chr9	61714495	61716114	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL722P	ENSG00000273940	73029	AL935212.2	ENSG00000231454	48109	None	None
HERVH_9q13	HERV	HERVH	prototype	chr9	61841391	61844246	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM27C	ENSG00000231527	9902	RN7SL722P	ENSG00000273940	51965	None	None
ERVLB4_9q13a	HERV	ERVLB4	oneside	chr9	62032228	62033315	-	noncoding	FAM27C	lncRNA	ANTISENSE	ENSG00000231527	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_9q13	HERV	MER4B	internal	chr9	62138611	62140045	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590399.4	ENSG00000231995	126274	FAM27C	ENSG00000231527	41691	None	None
LTR25_9q13a	HERV	LTR25	internal	chr9	62314358	62315494	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590399.4	ENSG00000231995	47439	AL590399.3	ENSG00000231212	34447	None	None
LTR25_9q13b	HERV	LTR25	internal	chr9	62315818	62320372	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590399.4	ENSG00000231995	48899	AL590399.3	ENSG00000231212	29569	None	None
ERVLB4_9q13b	HERV	ERVLB4	prototype	chr9	62628151	62635811	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATP5F1AP7	ENSG00000241571	51101	BX005266.3	ENSG00000234451	17352	None	None
HERVL_9q13a	HERV	HERVL	prototype	chr9	63436050	63440056	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591438.1	ENSG00000233555	141198	BMS1P10	ENSG00000237238	50933	None	None
HERVL_9q13b	HERV	HERVL	prototype	chr9	64760038	64764067	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGKV1OR-2	ENSG00000156755	987	AL359955.2	ENSG00000235932	22283	None	None
HERVIP10F_9q13	HERV	HERVIP10F	prototype	chr9	64870415	64878944	-	noncoding	AC125634.1	unprocessed_pseudogene	SENSE	ENSG00000223602	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr9:64870525-64870536
ERV316A3_9q13	HERV	ERV316A3	oneside	chr9	64919512	64922024	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC125634.1	ENSG00000223602	30449	FO082814.1	ENSG00000287988	221034	None	None
HERVL_9q21.11a	HERV	HERVL	prototype	chr9	65245525	65249540	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGKV1OR9-1	ENSG00000204780	1003	AL512605.1	ENSG00000236252	14664	None	None
HERVL_9q21.11b	HERV	HERVL	prototype	chr9	65772421	65776436	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGKV1OR-3	ENSG00000204776	987	BX284632.2	ENSG00000237904	22290	None	None
ERVLB4_9q21.11a	HERV	ERVLB4	prototype	chr9	66662669	66670329	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATP5F1AP10	ENSG00000277297	50829	RAB28P4	ENSG00000276894	20392	None	None
MER4B_9q21.11	HERV	MER4B	internal	chr9	67448331	67449758	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX005195.1	ENSG00000276204	118927	BX664730.1	ENSG00000276898	62276	None	None
ERVLB4_9q21.11b	HERV	ERVLB4	oneside	chr9	67555396	67556838	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX664730.1	ENSG00000276898	40003	AL627230.2	ENSG00000275904	140238	None	None
HERVH_9q21.11	HERV	HERVH	prototype	chr9	67736588	67739443	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL627230.1	ENSG00000275493	10333	RN7SL787P	ENSG00000274098	52056	None	None
ERVLE_9q21.11a	HERV	ERVLE	internal	chr9	68663292	68665299	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM252-DT	ENSG00000226337	18850	PIP5K1B	ENSG00000107242	39941	None	None
ERVLE_9q21.11b	HERV	ERVLE	internal	chr9	69268703	69270108	-	noncoding	TJP2	protein_coding	ANTISENSE	ENSG00000119139	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_9q21.12	HERV	MER41	oneside	chr9	69304827	69307567	-	noncoding	BANCR	lncRNA	SENSE	ENSG00000278910	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr9:69307106-69307135
HERVH_9q21.12	HERV	HERVH	prototype	chr9	69404587	69410267	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	APBA1	ENSG00000107282	17265	FAM189A2	ENSG00000135063	12029	None	None
ERVLE_9q21.12	HERV	ERVLE	internal	chr9	69768513	69772563	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C9orf135-DT	ENSG00000225626	45831	PTAR1	ENSG00000188647	8502	None	None
HERVIP10F_9q21.12	HERV	HERVIP10F	prototype	chr9	69925311	69934098	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAMDC2-AS1	ENSG00000204706	99823	C9orf135	ENSG00000204711	19084	None	None
MER4_9q21.12	HERV	MER4	oneside	chr9	70654072	70660640	+	noncoding	TRPM3	protein_coding	ANTISENSE	ENSG00000083067	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_9q21.13	HERV	HUERSP3B	internal	chr9	71508063	71509189	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL35AP21	ENSG00000229814	80412	TRPM3	ENSG00000083067	61159	None	None
ERVLE_9q21.13a	HERV	ERVLE	internal	chr9	71616175	71624136	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL35AP21	ENSG00000229814	26242	CEMIP2	ENSG00000135048	59230	None	None
ERVLE_9q21.13b	HERV	ERVLE	internal	chr9	71794050	71795363	-	noncoding	CEMIP2	protein_coding	SENSE	ENSG00000135048	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_9q21.13c	HERV	ERVLE	internal	chr9	71989114	71995310	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C9orf85	ENSG00000155621	3060	HSPB1P1	ENSG00000236060	12571	None	None
ERV316A3_9q21.13a	HERV	ERV316A3	internal	chr9	72034611	72037990	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSPB1P1	ENSG00000236060	26475	C9orf57	ENSG00000204669	13386	None	None
HERVL_9q21.13a	HERV	HERVL	oneside	chr9	72486938	72488574	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL596448.1	ENSG00000225947	15862	TMC1	ENSG00000165091	33034	None	None
ERVLE_9q21.13d	HERV	ERVLE	internal	chr9	72623297	72624696	-	noncoding	TMC1	protein_coding	ANTISENSE	ENSG00000165091	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_9q21.13	HERV	ERVL	internal	chr9	73008864	73009670	-	noncoding	ALDH1A1	protein_coding	SENSE	ENSG00000165092	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_9q21.13b	HERV	ERV316A3	internal	chr9	73130115	73130716	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ALDH1A1	ENSG00000165092	49673	ANXA1	ENSG00000135046	21149	chr9:73130017-73130248	None
MER41_9q21.13a	HERV	MER41	oneside	chr9	73175440	73176791	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANXA1	ENSG00000135046	5047	DPP3P2	ENSG00000221844	297587	chr9:73176605-73176907	None
ERV316A3_9q21.13c	HERV	ERV316A3	oneside	chr9	73535271	73538129	+	noncoding	AL451127.2	lncRNA	ANTISENSE	ENSG00000286840	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_9q21.13b	HERV	HERVL	oneside	chr9	73721450	73723831	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512594.1	ENSG00000236701	71611	RNA5SP286	ENSG00000212454	27141	None	None
ERVLE_9q21.13e	HERV	ERVLE	oneside	chr9	73812533	73813547	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP286	ENSG00000212454	61456	AL513124.1	ENSG00000223368	57349	None	None
ERVLB4_9q21.13	HERV	ERVLB4	prototype	chr9	73963797	73968794	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL513124.1	ENSG00000223368	90500	AL355674.1	ENSG00000227809	402541	None	None
HERVH_9q21.13a	HERV	HERVH	prototype	chr9	74085583	74091436	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL513124.1	ENSG00000223368	212286	AL355674.1	ENSG00000227809	279899	chr9:74085609-74085885,chr9:74088197-74088515	None
MER34B_9q21.13	HERV	MER34B	oneside	chr9	74461109	74465721	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355674.1	ENSG00000227809	76531	RORB-AS1	ENSG00000224825	19830	None	None
HERVL40_9q21.13	HERV	HERVL40	internal	chr9	74979007	74979609	+	noncoding	CARNMT1-AS1	lncRNA	SENSE	ENSG00000203321	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_9q21.13	HERV	HERVL18	prototype	chr9	75235558	75239484	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158073.1	ENSG00000235707	162405	RNU6-1228P	ENSG00000212316	37381	chr9:75239239-75239525	None
HERVH_9q21.13b	HERV	HERVH	prototype	chr9	75351145	75357575	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158073.1	ENSG00000235707	44314	RNU6-1228P	ENSG00000212316	152968	None	None
HUERSP2_9q21.13	HERV	HUERSP2	prototype	chr9	75644563	75649794	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OTX2P1	ENSG00000234644	74428	AL353780.1	ENSG00000236376	56015	None	None
MER41_9q21.13b	HERV	MER41	internal	chr9	76028977	76030675	-	coding	PCSK5	protein_coding	ANTISENSE	ENSG00000099139	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_9q21.2	HERV	HERVH	prototype	chr9	78180694	78186819	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353705.1	ENSG00000228781	1	AL353705.4	ENSG00000234819	32301	None	None
ERVLB4_9q21.2	HERV	ERVLB4	oneside	chr9	78386614	78389054	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSAT1	ENSG00000135069	56521	AL592221.1	ENSG00000270627	200104	None	None
ERVLE_9q21.31a	HERV	ERVLE	internal	chr9	78689767	78691982	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTND2P8	ENSG00000237257	49738	AL592221.1	ENSG00000270627	100228	None	None
ERVLE_9q21.31b	HERV	ERVLE	internal	chr9	79291319	79294259	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CHCHD2P9	ENSG00000186940	97045	AL512634.1	ENSG00000260995	93005	None	None
ERVLE_9q21.31c	HERV	ERVLE	internal	chr9	79887842	79889062	-	noncoding	AL161912.2	lncRNA	ANTISENSE	ENSG00000260564	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr9:79887778-79887927	chr9:79887914-79887927,chr9:79887842-79887865,chr9:79887872-79887884,chr9:79887904-79887909
HERVH_9q21.31a	HERV	HERVH	prototype	chr9	80137295	80143148	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01507	ENSG00000230945	102740	NPAP1P4	ENSG00000236521	213881	None	None
ERVLE_9q21.31d	HERV	ERVLE	internal	chr9	80548664	80550609	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPAP1P4	ENSG00000236521	188326	MTCO1P51	ENSG00000232981	12962	None	None
ERV316A3_9q21.31a	HERV	ERV316A3	internal	chr9	81000385	81001884	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS20P25	ENSG00000228375	408395	AL138749.1	ENSG00000226798	129090	None	None
HERVH_9q21.31b	HERV	HERVH	prototype	chr9	81009084	81015281	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138749.1	ENSG00000226798	137789	RPS20P25	ENSG00000228375	394998	None	chr9:81009365-81009384
ERV316A3_9q21.31b	HERV	ERV316A3	prototype	chr9	81128337	81134257	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138749.1	ENSG00000226798	257042	RPS20P25	ENSG00000228375	276022	None	None
ERVLE_9q21.31e	HERV	ERVLE	internal	chr9	81148342	81149626	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS20P25	ENSG00000228375	260653	AL138749.1	ENSG00000226798	277047	None	None
ERV316A3_9q21.31c	HERV	ERV316A3	oneside	chr9	81211486	81213696	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138749.1	ENSG00000226798	340191	RPS20P25	ENSG00000228375	196583	None	None
HERVL_9q21.31	HERV	HERVL	prototype	chr9	81268417	81271910	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS20P25	ENSG00000228375	138369	AL138749.1	ENSG00000226798	397122	None	None
ERVLE_9q21.32a	HERV	ERVLE	internal	chr9	82526388	82527390	+	noncoding	AL162726.3	transcribed_unprocessed_pseudogene	SENSE	ENSG00000228430	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_9q21.32b	HERV	ERVLE	internal	chr9	82676920	82677940	+	noncoding	AL162726.3	transcribed_unprocessed_pseudogene	SENSE	ENSG00000228430	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_9q21.32a	HERV	HERVH	prototype	chr9	82701562	82706286	-	noncoding	AL162726.3	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000228430	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_9q21.32c	HERV	ERVLE	internal	chr9	82710380	82713418	-	noncoding	AL162726.3	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000228430	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_9q21.32	HERV	ERV316A3	prototype	chr9	82776293	82777994	-	noncoding	AL162726.3	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000228430	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_9q21.32b	HERV	HERVH	prototype	chr9	82883733	82889489	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL162726.3	ENSG00000228430	103539	RASEF	ENSG00000165105	90101	chr9:82883732-82884153	chr9:82884118-82884150
HERVL40_9q21.32	HERV	HERVL40	prototype	chr9	83717647	83724536	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GKAP1	ENSG00000165113	14889	AL354920.1	ENSG00000254473	4269	None	None
HERVL_9q21.32	HERV	HERVL	prototype	chr9	83843916	83847951	+	noncoding	AL354733.2,KIF27	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000231616,ENSG00000165115	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_9q21.33a	HERV	ERVLB4	oneside	chr9	84643747	84648345	-	noncoding	AL157886.1	lncRNA	ANTISENSE	ENSG00000285987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_9q21.33a	HERV	HERVL	prototype	chr9	85370157	85376998	-	noncoding	AL583827.1	lncRNA	SENSE	ENSG00000285634	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_9q21.33b	HERV	ERVLB4	internal	chr9	85379819	85381531	-	noncoding	AL583827.1	lncRNA	SENSE	ENSG00000285634	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_9q21.33a	HERV	HERVH	prototype	chr9	85458320	85466944	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL583827.1	ENSG00000285634	14090	STK33P1	ENSG00000227412	25635	None	None
ERV316A3_9q21.33	HERV	ERV316A3	internal	chr9	85630235	85631584	-	noncoding	AGTPBP1	protein_coding	SENSE	ENSG00000135049	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_9q21.33b	HERV	HERVL	prototype	chr9	85775592	85779684	-	noncoding	AL353743.4	unprocessed_pseudogene	ANTISENSE	ENSG00000234424	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_9q21.33b	HERV	HERVH	oneside	chr9	85879231	85880934	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PHBP7	ENSG00000213711	17969	AL353743.1	ENSG00000165121	29689	None	None
HERVH_9q21.33c	HERV	HERVH	oneside	chr9	85880935	85884510	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353743.1	ENSG00000165121	31393	PHBP7	ENSG00000213711	14393	None	chr9:85881261-85881266
HERVH_9q21.33d	HERV	HERVH	oneside	chr9	86146098	86147429	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161447.1	ENSG00000233713	13247	C9orf153	ENSG00000187753	72836	None	None
HERV9_9q21.33	HERV	HERV9	prototype	chr9	86147430	86156854	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C9orf153	ENSG00000187753	63411	AL161447.1	ENSG00000233713	14579	None	None
HARLEQUIN_9q21.33	HERV	HARLEQUIN	internal	chr9	86361186	86367515	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353678.1	ENSG00000214908	7451	TUT7	ENSG00000083223	6732	None	None
HERVH_9q21.33e	HERV	HERVH	oneside	chr9	86586834	86589057	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353613.1	ENSG00000232211	43090	AL158828.1	ENSG00000235819	98227	None	None
HERVH_9q21.33f	HERV	HERVH	prototype	chr9	87410694	87416706	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136367.1	ENSG00000212421	150109	AL353752.1	ENSG00000228373	6928	None	chr9:87410911-87410927
ERVLE_9q21.33	HERV	ERVLE	internal	chr9	87433663	87437179	-	noncoding	AL353752.2	lncRNA	SENSE	ENSG00000286842	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVL_9q21.33	HERV	ERVL	oneside	chr9	87440710	87443900	-	noncoding	AL353752.2	lncRNA	SENSE	ENSG00000286842	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVI_9q22.1	HERV	HERVI	oneside	chr9	88041509	88044802	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353572.4	ENSG00000287750	21643	RPS10P3	ENSG00000217716	24716	None	chr9:88044433-88044439
MER4B_9q22.1	HERV	MER4B	internal	chr9	88327080	88328374	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP49	ENSG00000226327	1741	AL353748.3	ENSG00000287769	56528	None	None
ERVLE_9q22.1	HERV	ERVLE	internal	chr9	88399815	88400470	+	noncoding	SPIN1	protein_coding	SENSE	ENSG00000106723	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_9q22.1a	HERV	MER41	prototype	chr9	88686487	88691604	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02843	ENSG00000228189	34307	AL390791.1	ENSG00000286414	43437	None	None
HERVW_9q22.1	HERV	HERVW	prototype	chr9	88940011	88944424	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PCNPP2	ENSG00000225856	26463	AL390791.1	ENSG00000286414	136295	None	None
MER41_9q22.1b	HERV	MER41	oneside	chr9	89125477	89128334	+	noncoding	SHC3	protein_coding	ANTISENSE	ENSG00000148082	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_9q22.1c	HERV	MER41	oneside	chr9	89133918	89136821	+	noncoding	SHC3	protein_coding	ANTISENSE	ENSG00000148082	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_9q22.1d	HERV	MER41	prototype	chr9	89138165	89143533	-	noncoding	SHC3	protein_coding	SENSE	ENSG00000148082	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:89139477-89139824	None
LTR19_9q22.2	HERV	LTR19	oneside	chr9	89295342	89297499	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SHC3	ENSG00000148082	116524	CKS2	ENSG00000123975	13696	None	None
LTR25_9q22.2	HERV	LTR25	internal	chr9	89300169	89303780	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SHC3	ENSG00000148082	121351	CKS2	ENSG00000123975	7415	None	None
ERVLB4_9q22.2a	HERV	ERVLB4	internal	chr9	89822743	89823717	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX470209.1	ENSG00000226206	990	AL161629.1	ENSG00000237626	2247	None	None
ERV316A3_9q22.2	HERV	ERV316A3	oneside	chr9	90017494	90019501	+	noncoding	AL161629.1	lncRNA	SENSE	ENSG00000237626	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVE_9q22.2a	HERV	HERVE	internal	chr9	90223643	90227704	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR7E31P	ENSG00000185074	6719	OR7E116P	ENSG00000225072	4481	None	None
HERVH_9q22.2	HERV	HERVH	prototype	chr9	90412695	90418349	+	noncoding	LINC01508	lncRNA	ANTISENSE	ENSG00000231107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_9q22.2b	HERV	HERVE	internal	chr9	90755224	90759266	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SYK	ENSG00000165025	42521	OR7E108P	ENSG00000270432	2994	None	chr9:90756991-90756997
MER4B_9q22.2	HERV	MER4B	oneside	chr9	90779599	90782518	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SYK	ENSG00000165025	19269	OR7E108P	ENSG00000270432	27369	None	None
HML4_9q22.2	HERV	HML4	oneside	chr9	90902407	90906329	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SYK	ENSG00000165025	3858	AL162585.1	ENSG00000287212	15661	None	None
ERVLB4_9q22.2b	HERV	ERVLB4	oneside	chr9	90916564	90918042	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SYK	ENSG00000165025	18015	AL162585.1	ENSG00000287212	3948	None	None
ERVLE_9q22.2	HERV	ERVLE	internal	chr9	90991449	90992575	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355607.2	ENSG00000260454	4374	AL355607.1	ENSG00000228216	26056	chr9:90992087-90992346	chr9:90992087-90992092
ERVLB4_9q22.2c	HERV	ERVLB4	internal	chr9	91003008	91003810	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158071.4	ENSG00000237422	73328	AL355607.2	ENSG00000260454	1107	None	None
ERVLB4_9q22.31a	HERV	ERVLB4	oneside	chr9	91466094	91467179	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353764.1	ENSG00000233081	38950	ROR2	ENSG00000169071	95912	None	None
ERVLB4_9q22.31b	HERV	ERVLB4	internal	chr9	91547146	91551285	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ROR2	ENSG00000169071	11806	AL353764.1	ENSG00000233081	120002	None	None
HERVW_9q22.31	HERV	HERVW	oneside	chr9	91980559	91982077	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ROR2	ENSG00000169071	30331	SPTLC1	ENSG00000090054	18010	None	None
ERVLB4_9q22.31c	HERV	ERVLB4	internal	chr9	91985419	91988334	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ROR2	ENSG00000169071	35191	SPTLC1	ENSG00000090054	11753	None	None
HERVH_9q22.31a	HERV	HERVH	oneside	chr9	92071698	92078223	+	noncoding	SPTLC1	protein_coding	ANTISENSE	ENSG00000090054	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr9:92072448-92072872,chr9:92073355-92073581,chr9:92075389-92075643,chr9:92077191-92077627	None
ERVLE_9q22.31	HERV	ERVLE	oneside	chr9	92223997	92225996	+	noncoding	IARS1	protein_coding	ANTISENSE	ENSG00000196305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_9q22.31a	HERV	MER34B	internal	chr9	92231162	92232328	+	noncoding	IARS1	protein_coding	ANTISENSE	ENSG00000196305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_9q22.31b	HERV	MER34B	internal	chr9	92232401	92233559	+	noncoding	IARS1	protein_coding	ANTISENSE	ENSG00000196305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_9q22.31	HERV	HERVL	oneside	chr9	92352507	92354517	-	noncoding	CENPP	protein_coding	ANTISENSE	ENSG00000188312	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_9q22.31d	HERV	ERVLB4	oneside	chr9	92779111	92783192	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BICD2	ENSG00000185963	14278	AL136981.3	ENSG00000288062	22239	None	None
MER41_9q22.31	HERV	MER41	oneside	chr9	92906104	92908866	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ALOX15P2	ENSG00000188101	4290	AL136981.1	ENSG00000226668	6496	None	None
HERVFRD_9q22.31	HERV	HERVFRD	oneside	chr9	92983638	92988018	-	noncoding	FGD3	protein_coding	ANTISENSE	ENSG00000127084	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_9q22.31b	HERV	HERVH	prototype	chr9	93347588	93353344	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C9orf129	ENSG00000204352	1174	RNU6-829P	ENSG00000200570	22212	chr9:93347579-93348004	None
MER4_9q22.31a	HERV	MER4	oneside	chr9	93356412	93359864	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C9orf129	ENSG00000204352	9998	RNU6-829P	ENSG00000200570	15692	None	None
MER4_9q22.31b	HERV	MER4	internal	chr9	93359945	93362424	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C9orf129	ENSG00000204352	13531	RNU6-829P	ENSG00000200570	13132	None	None
ERVLB4_9q22.31e	HERV	ERVLB4	internal	chr9	93368047	93370458	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-829P	ENSG00000200570	5098	C9orf129	ENSG00000204352	21633	None	None
HERVL18_9q22.31	HERV	HERVL18	oneside	chr9	93391121	93393828	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL583839.1	ENSG00000201074	24027	RNU6-829P	ENSG00000200570	15454	None	None
HML3_9q22.31	HERV	HML3	prototype	chr9	93751064	93755813	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL442224.1	ENSG00000231990	52534	PHF2	ENSG00000197724	71477	None	None
HERVL_9q22.32	HERV	HERVL	internal	chr9	93969545	93974319	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BARX1-DT	ENSG00000235601	10405	PTPDC1	ENSG00000158079	56475	None	None
ERVLE_9q22.32	HERV	ERVLE	internal	chr9	93995647	94001870	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTPDC1	ENSG00000158079	28924	BARX1-DT	ENSG00000235601	36507	None	None
ERVLB4_9q22.32	HERV	ERVLB4	oneside	chr9	94252358	94254294	+	coding	LINC02603	lncRNA	ANTISENSE	ENSG00000230262	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_9q22.32	HERV	PABLA	prototype	chr9	94265595	94270221	-	noncoding	ZNF169	protein_coding	ANTISENSE	ENSG00000175787	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:94269429-94269474	None
HERVH_9q22.32	HERV	HERVH	prototype	chr9	94539871	94545509	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358232.1	ENSG00000224245	26992	PCAT7	ENSG00000231806	9545	None	None
LTR57_9q22.32	HERV	LTR57	internal	chr9	94577573	94578558	+	noncoding	PCAT7,FBP2	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000231806,ENSG00000130957	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_9q22.32	HERV	PRIMA41	oneside	chr9	94813869	94816971	-	noncoding	AOPEP	protein_coding	ANTISENSE	ENSG00000148120	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_9q22.32	HERV	MER4	prototype	chr9	95323682	95332636	-	noncoding	FANCC	protein_coding	SENSE	ENSG00000158169	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_9q22.32	HERV	MER41	prototype	chr9	96280620	96286406	+	coding	HSD17B3,AL160269.1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000130948,ENSG00000285269	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_9q22.33a	HERV	ERVLB4	prototype	chr9	96659041	96662654	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589843.1	ENSG00000224848	24396	PRXL2C	ENSG00000158122	3724	None	None
ERVLB4_9q22.33b	HERV	ERVLB4	internal	chr9	96895025	96897095	+	noncoding	MFSD14C	protein_coding	ANTISENSE	ENSG00000196312	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_9q22.33c	HERV	ERVLB4	internal	chr9	97028132	97028814	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MFSD14C	ENSG00000196312	14424	CTSV	ENSG00000136943	863	None	None
HERVH_9q22.33a	HERV	HERVH	prototype	chr9	97214494	97220014	+	noncoding	ANKRD18CP,AL590705.1	unprocessed_pseudogene,lncRNA	ANTISENSE,ANTISENSE	ENSG00000159712,ENSG00000203279	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:97215432-97215656,chr9:97219588-97219633	chr9:97214803-97214825
ERVLB4_9q22.33d	HERV	ERVLB4	unknown	chr9	97300261	97303836	-	noncoding	STRA6LP	lncRNA	ANTISENSE	ENSG00000255036	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_9q22.33e	HERV	ERVLB4	oneside	chr9	97524460	97526188	-	noncoding	TMOD1	protein_coding	ANTISENSE	ENSG00000136842	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR46_9q22.33	HERV	LTR46	internal	chr9	97701097	97701986	+	coding	PTCSC2	lncRNA	ANTISENSE	ENSG00000236130	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_9q22.33	HERV	MER4B	internal	chr9	98041983	98045194	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NANS	ENSG00000095380	11538	RNU6-918P	ENSG00000212521	9648	None	None
HUERSP1_9q22.33	HERV	HUERSP1	oneside	chr9	98051685	98055734	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NANS	ENSG00000095380	998	RNU6-918P	ENSG00000212521	19350	None	None
LTR23_9q22.33a	HERV	LTR23	internal	chr9	98111494	98115852	+	noncoding	TRIM14	protein_coding	ANTISENSE	ENSG00000106785	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR23_9q22.33b	HERV	LTR23	oneside	chr9	98116034	98117804	+	noncoding	TRIM14,AL137073.1	protein_coding,misc_RNA	ANTISENSE,SENSE	ENSG00000106785,ENSG00000274011	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_9q22.33b	HERV	HERVH	prototype	chr9	98265313	98271294	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GABBR2	ENSG00000136928	16815	TBC1D2	ENSG00000095383	9664	None	None
ERV316A3_9q22.33a	HERV	ERV316A3	prototype	chr9	98661715	98668243	+	noncoding	GABBR2	protein_coding	ANTISENSE	ENSG00000136928	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_9q22.33b	HERV	ERV316A3	oneside	chr9	98935317	98937951	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	COL15A1	ENSG00000204291	5228	AL136084.1	ENSG00000229338	43380	None	None
ERVLE_9q22.33	HERV	ERVLE	internal	chr9	98937941	98938643	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136084.1	ENSG00000229338	46004	COL15A1	ENSG00000204291	4536	None	None
MER4_9q22.33	HERV	MER4	prototype	chr9	99006866	99015164	-	noncoding	COL15A1	protein_coding	ANTISENSE	ENSG00000204291	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_9q22.33c	HERV	HERVH	prototype	chr9	99669781	99675901	+	noncoding	AL359710.1,STX17-AS1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000237461,ENSG00000255145	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_9q31.1a	HERV	MER41	prototype	chr9	100030133	100034561	+	noncoding	ERP44	protein_coding	ANTISENSE	ENSG00000023318	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_9q31.1a	HERV	HERVL	oneside	chr9	100074354	100079497	+	coding	ERP44	protein_coding	ANTISENSE	ENSG00000023318	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_9q31.1	HERV	HERVH	prototype	chr9	100140182	100146522	-	noncoding	INVS	protein_coding	ANTISENSE	ENSG00000119509	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:100145516-100145726,chr9:100146146-100146544	None
HERVL40_9q31.1a	HERV	HERVL40	oneside	chr9	100213558	100216444	-	noncoding	INVS	protein_coding	ANTISENSE	ENSG00000119509	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML5_9q31.1	HERV	HML5	prototype	chr9	100364027	100369211	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MSANTD3	ENSG00000066697	57945	TEX10	ENSG00000136891	11085	None	None
HERVL32_9q31.1	HERV	HERVL32	prototype	chr9	100913693	100916653	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL162395.1	ENSG00000230161	952	GAPDHP26	ENSG00000229541	59015	None	None
MER41_9q31.1b	HERV	MER41	oneside	chr9	101116179	101117658	+	noncoding	PLPPR1	protein_coding	SENSE	ENSG00000148123	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_9q31.1	HERV	HML1	prototype	chr9	101123434	101127858	-	noncoding	PLPPR1,AL161631.1	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000148123,ENSG00000238143	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_9q31.1b	HERV	HERVL	oneside	chr9	101178021	101180285	+	noncoding	PLPPR1	protein_coding	SENSE	ENSG00000148123	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_9q31.1a	HERV	MER4B	internal	chr9	101377191	101380103	+	noncoding	BAAT	protein_coding	ANTISENSE	ENSG00000136881	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_9q31.1a	HERV	ERVLE	internal	chr9	101490002	101491580	-	noncoding	PGAP4	protein_coding	SENSE	ENSG00000165152	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_9q31.1a	HERV	MER101	oneside	chr9	101493858	101499809	-	noncoding	PGAP4	protein_coding	SENSE	ENSG00000165152	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_9q31.1b	HERV	ERVLE	internal	chr9	102017314	102020177	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTND3P4	ENSG00000230302	223558	ARL2BPP7	ENSG00000230418	35075	None	None
ERV316A3_9q31.1a	HERV	ERV316A3	prototype	chr9	102099591	102102407	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARL2BPP7	ENSG00000230418	43850	RNU6-329P	ENSG00000238882	154197	None	None
HERVL40_9q31.1b	HERV	HERVL40	prototype	chr9	102390362	102398887	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL442644.2	ENSG00000286243	45699	RNU6-329P	ENSG00000238882	133652	None	None
MER4B_9q31.1b	HERV	MER4B	internal	chr9	102408787	102412555	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL442644.2	ENSG00000286243	32031	RNU6-329P	ENSG00000238882	152077	None	None
ERVL_9q31.1	HERV	ERVL	internal	chr9	102539895	102542805	+	noncoding	LINC00587	lncRNA	SENSE	ENSG00000204250	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_9q31.1c	HERV	HERVL40	oneside	chr9	102710082	102713759	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00587	ENSG00000204250	52568	AL365396.1	ENSG00000234269	208815	None	None
HERVL_9q31.1c	HERV	HERVL	prototype	chr9	102806903	102813464	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL365396.1	ENSG00000234269	109110	LINC00587	ENSG00000204250	149389	None	None
MER61_9q31.1	HERV	MER61	prototype	chr9	103126782	103132496	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01492	ENSG00000225564	8027	AL589823.1	ENSG00000229830	61184	None	None
ERVLE_9q31.1c	HERV	ERVLE	internal	chr9	103206712	103212466	-	noncoding	LINC01492	lncRNA	SENSE	ENSG00000225564	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_9q31.1d	HERV	ERVLE	oneside	chr9	103504275	103505242	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP291	ENSG00000253031	184231	AL390962.1	ENSG00000226566	74383	None	None
ERV316A3_9q31.1b	HERV	ERV316A3	oneside	chr9	103979252	103983451	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590381.1	ENSG00000285483	16304	RNA5SP291	ENSG00000253031	289675	None	None
MER41_9q31.1c	HERV	MER41	prototype	chr9	104077222	104084950	-	noncoding	SMC2-AS1	lncRNA	SENSE	ENSG00000270332	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_9q31.1c	HERV	ERV316A3	oneside	chr9	104169981	104172285	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SMC2	ENSG00000136824	28562	TOPORSLP	ENSG00000242111	97943	None	None
MER4_9q31.1	HERV	MER4	prototype	chr9	104408924	104415996	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512646.1	ENSG00000203396	79528	OR13F1	ENSG00000186881	88267	None	None
ERV316A3_9q31.1d	HERV	ERV316A3	prototype	chr9	104430860	104432587	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR13F1	ENSG00000186881	71676	AL512646.1	ENSG00000203396	101464	None	None
MER101_9q31.1b	HERV	MER101	internal	chr9	105055371	105056952	+	noncoding	AL591506.1	lncRNA	ANTISENSE	ENSG00000286536	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:105055997-105056328	chr9:105056239-105056243,chr9:105056132-105056139
ERVLB4_9q31.2	HERV	ERVLB4	internal	chr9	105701226	105701932	-	noncoding	TMEM38B	protein_coding	ANTISENSE	ENSG00000095209	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_9q31.2	HERV	HERVL	prototype	chr9	106039982	106044643	-	noncoding	LINC01505	lncRNA	ANTISENSE	ENSG00000234323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_9q31.2	HERV	HERVH	oneside	chr9	106788282	106793849	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01505	ENSG00000234323	47407	RNA5SP292	ENSG00000212276	49900	None	None
ERVLE_9q31.2a	HERV	ERVLE	internal	chr9	107218540	107220275	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAD23B	ENSG00000119318	62862	AL445487.1	ENSG00000226535	47392	None	None
ERVLE_9q31.2b	HERV	ERVLE	internal	chr9	108258347	108258914	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353742.1	ENSG00000230030	3527	AL669983.1	ENSG00000169253	367919	None	None
MER4_9q31.3a	HERV	MER4	oneside	chr9	110307558	110309883	+	noncoding	TXNDC8	protein_coding	ANTISENSE	ENSG00000204193	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_9q31.3b	HERV	MER4	oneside	chr9	110309899	110314420	+	noncoding	TXNDC8	protein_coding	ANTISENSE	ENSG00000204193	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_9q31.3	HERV	ERV316A3	oneside	chr9	111052701	111054452	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LPAR1	ENSG00000198121	14243	RNY4P18	ENSG00000212409	42873	None	None
HERVL_9q31.3	HERV	HERVL	oneside	chr9	111090727	111092086	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LPAR1	ENSG00000198121	52269	RNY4P18	ENSG00000212409	5239	None	None
ERVLE_9q31.3	HERV	ERVLE	internal	chr9	111123096	111124325	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL162414.1	ENSG00000227531	14921	RNY4P18	ENSG00000212409	25683	None	chr9:111124281-111124283
HERVW_9q31.3	HERV	HERVW	oneside	chr9	111336413	111338179	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR2K2	ENSG00000171133	6230	ECPAS	ENSG00000136813	22513	None	None
ERVLB4_9q31.3	HERV	ERVLB4	internal	chr9	111949200	111952521	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UGCG	ENSG00000148154	13831	RNU6-710P	ENSG00000222356	44114	None	None
HERVL_9q32	HERV	HERVL	prototype	chr9	112373201	112376925	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSDL2	ENSG00000119471	3155	AL359073.1	ENSG00000213529	10085	None	None
HERVK11_9q32	HERV	HERVK11	prototype	chr9	112391953	112400106	-	coding	HSDL2,C9orf147	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000119471,ENSG00000230185	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_9q32a	HERV	ERV316A3	oneside	chr9	112907945	112910791	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC46A2	ENSG00000119457	17069	ZNF883	ENSG00000228623	46931	None	None
ERVLE_9q32a	HERV	ERVLE	internal	chr9	112917589	112918207	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF883	ENSG00000228623	39515	SLC46A2	ENSG00000119457	26713	None	None
HERVL40_9q32	HERV	HERVL40	oneside	chr9	112937083	112938815	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC46A2	ENSG00000119457	46207	ZNF883	ENSG00000228623	18907	None	None
ERVLE_9q32b	HERV	ERVLE	internal	chr9	112982027	112984145	-	noncoding	ZNF883	transcribed_unprocessed_pseudogene	SENSE	ENSG00000228623	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_9q32b	HERV	ERV316A3	oneside	chr9	113033663	113034667	+	noncoding	ZNF883	protein_coding	ANTISENSE	ENSG00000285447	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_9q33.1	HERV	ERV316A3	internal	chr9	114972522	114973826	+	noncoding	DEC1	lncRNA	SENSE	ENSG00000173077	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_9q33.1a	HERV	HERVH	prototype	chr9	115174652	115180335	-	noncoding	DEC1	lncRNA	ANTISENSE	ENSG00000173077	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:115180030-115180324	None
HERVH_9q33.1b	HERV	HERVH	prototype	chr9	115473181	115478918	+	noncoding	AL691420.1	lncRNA	ANTISENSE	ENSG00000228714	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:115475848-115476256	None
ERVLB4_9q33.1a	HERV	ERVLB4	oneside	chr9	115676479	115680571	+	noncoding	AL691420.1	lncRNA	ANTISENSE	ENSG00000228714	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_9q33.1c	HERV	HERVH	prototype	chr9	115839178	115844929	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00474	ENSG00000204148	43240	AL691420.1	ENSG00000228714	94848	None	chr9:115844575-115844585
HUERSP1_9q33.1a	HERV	HUERSP1	oneside	chr9	116674731	116679584	+	noncoding	ASTN2	protein_coding	ANTISENSE	ENSG00000148219	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_9q33.1b	HERV	HUERSP1	oneside	chr9	116683070	116685498	+	noncoding	ASTN2	protein_coding	ANTISENSE	ENSG00000148219	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_9q33.1	HERV	ERVLE	oneside	chr9	118093386	118095379	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355592.1	ENSG00000225050	592373	TPT1P9	ENSG00000234782	10004	None	None
HERVH_9q33.1d	HERV	HERVH	prototype	chr9	118485633	118491397	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355592.1	ENSG00000225050	196355	TPT1P9	ENSG00000234782	402251	None	None
ERVLB4_9q33.1b	HERV	ERVLB4	internal	chr9	118831513	118833759	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUBB4BP6	ENSG00000231166	67168	BRINP1	ENSG00000078725	319699	None	None
ERVLE_9q33.2a	HERV	ERVLE	internal	chr9	120093380	120094966	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL441989.1	ENSG00000225960	119058	MIR147A	ENSG00000207814	150013	None	None
ERVL_9q33.2a	HERV	ERVL	internal	chr9	121232842	121234699	-	noncoding	GSN	protein_coding	ANTISENSE	ENSG00000148180	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_9q33.2b	HERV	ERVLE	internal	chr9	121394197	121398743	-	noncoding	AL359644.1	lncRNA	ANTISENSE	ENSG00000227355	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:121398324-121398675	None
ERVLE_9q33.2c	HERV	ERVLE	internal	chr9	121430881	121435031	+	noncoding	AL359644.1	lncRNA	SENSE	ENSG00000227355	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_9q33.2	HERV	ERVLB4	internal	chr9	121516950	121518856	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GGTA1P	ENSG00000204136	16923	HMGB1P37	ENSG00000213467	960	None	None
LTR25_9q33.2	HERV	LTR25	internal	chr9	121520592	121522193	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DAB2IP	ENSG00000136848	44864	HMGB1P37	ENSG00000213467	168	None	None
HERVH_9q33.2a	HERV	HERVH	prototype	chr9	121790002	121796769	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DAB2IP	ENSG00000136848	4472	AL596244.1	ENSG00000261534	18905	chr9:121790782-121791042	None
ERVLE_9q33.2d	HERV	ERVLE	internal	chr9	122178521	122178915	-	noncoding	MORN5	protein_coding	ANTISENSE	ENSG00000185681	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_9q33.2	HERV	HUERSP1	prototype	chr9	122416391	122422448	-	noncoding	AL359636.2	lncRNA	ANTISENSE	ENSG00000234156	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL66_9q33.2	HERV	HERVL66	oneside	chr9	122489212	122490319	-	noncoding	AL359636.2	lncRNA	ANTISENSE	ENSG00000234156	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_9q33.2	HERV	ERV316A3	oneside	chr9	122501756	122504590	-	noncoding	AL359636.2	lncRNA	ANTISENSE	ENSG00000234156	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_9q33.2b	HERV	HERVH	prototype	chr9	122530607	122536148	-	noncoding	AL359636.2	lncRNA	ANTISENSE	ENSG00000234156	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_9q33.2b	HERV	ERVL	internal	chr9	122564048	122565612	+	noncoding	AL359636.2	lncRNA	SENSE	ENSG00000234156	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_9q33.2	HERV	HML3	oneside	chr9	122619563	122621428	-	noncoding	AL359636.2	lncRNA	ANTISENSE	ENSG00000234156	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_9q33.3a	HERV	ERVLE	oneside	chr9	124203429	124206217	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NEK6	ENSG00000119408	51389	LHX2	ENSG00000106689	170128	None	None
ERVLB4_9q33.3a	HERV	ERVLB4	internal	chr9	124430352	124434712	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADGRD2	ENSG00000180264	16713	PSMB7	ENSG00000136930	14908	None	None
MER41_9q33.3	HERV	MER41	oneside	chr9	125567193	125569637	+	noncoding	MAPKAP1,AL162584.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000119487,ENSG00000227068	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PABLA_9q33.3	HERV	PABLA	internal	chr9	125569634	125573107	+	noncoding	MAPKAP1,AL162584.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000119487,ENSG00000227068	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_9q33.3	HERV	ERV316A3	oneside	chr9	125612666	125613700	+	noncoding	MAPKAP1	protein_coding	ANTISENSE	ENSG00000119487	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_9q33.3a	HERV	HERVH	prototype	chr9	126074450	126080414	-	noncoding	AL589923.1	lncRNA	ANTISENSE	ENSG00000232413	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_9q33.3b	HERV	ERVLB4	oneside	chr9	126567532	126573829	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161908.1	ENSG00000224842	15765	AL356309.1	ENSG00000226078	37189	None	None
ERVLB4_9q33.3c	HERV	ERVLB4	internal	chr9	126574454	126575939	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161908.1	ENSG00000224842	13655	AL356309.1	ENSG00000226078	44111	None	None
ERVLE_9q33.3b	HERV	ERVLE	oneside	chr9	126738046	126743694	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZBTB43	ENSG00000169155	61312	AL161731.1	ENSG00000286428	33355	None	None
ERVLE_9q33.3c	HERV	ERVLE	internal	chr9	126897449	126905176	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZBTB34	ENSG00000177125	11571	RALGPS1	ENSG00000136828	9598	None	None
HERVH_9q33.3b	HERV	HERVH	oneside	chr9	127413306	127415068	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC2A8	ENSG00000136856	4882	ZNF79	ENSG00000196152	9306	None	None
HML2_9q34.11	HERV	HML2	prototype	chr9	128850236	128857457	+	noncoding	AL441992.3,KYAT1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000286112,ENSG00000171097	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH19_9q34.11	HERV	HERVFH19	internal	chr9	129588167	129594670	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NTMT1	ENSG00000148335	14214	AL391056.1	ENSG00000227619	3611	None	None
LTR19_9q34.11	HERV	LTR19	oneside	chr9	129594670	129595729	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NTMT1	ENSG00000148335	13155	AL391056.1	ENSG00000227619	10114	None	None
ERVLB4_9q34.11	HERV	ERVLB4	oneside	chr9	129766904	129771287	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2V1P4	ENSG00000233909	19909	PTGES	ENSG00000148344	13862	None	None
ERV316A3_9q34.12	HERV	ERV316A3	internal	chr9	131001251	131004495	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LAMC3	ENSG00000050555	4679	AL161733.1	ENSG00000236658	55731	None	None
HERVH_9q34.13	HERV	HERVH	prototype	chr9	131547214	131551936	+	noncoding	PRRT1B	protein_coding	SENSE	ENSG00000283526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr9:131549320-131549359
HML3_9q34.13	HERV	HML3	prototype	chr9	131680373	131685811	+	noncoding	RAPGEF1	protein_coding	ANTISENSE	ENSG00000107263	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_9q34.13	HERV	ERV316A3	oneside	chr9	131993386	131996590	+	noncoding	MED27	protein_coding	ANTISENSE	ENSG00000160563	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_9q34.13	HERV	MER101	internal	chr9	132703084	132704839	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GTF3C4	ENSG00000125484	8131	AK8	ENSG00000165695	20739	None	None
HERVI_9q34.13	HERV	HERVI	prototype	chr9	133031580	133038234	-	noncoding	GTF3C5	protein_coding	ANTISENSE	ENSG00000148308	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_9q34.13	HERV	HERV3	oneside	chr9	133075826	133080083	-	noncoding	CELP	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000170827	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_9q34.2	HERV	HUERSP1	oneside	chr9	133287145	133294354	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL772161.2	ENSG00000201843	8116	ABO	ENSG00000175164	11121	None	None
ERV316A3_9q34.2a	HERV	ERV316A3	oneside	chr9	133549683	133553929	-	noncoding	ADAMTSL2	protein_coding	ANTISENSE	ENSG00000197859	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_9q34.2	HERV	ERVLE	internal	chr9	134010148	134011797	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VAV2	ENSG00000160293	17544	BRD3OS	ENSG00000235106	13684	None	None
ERV316A3_9q34.2b	HERV	ERV316A3	internal	chr9	134496237	134496992	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL669970.1	ENSG00000223795	8480	RXRA	ENSG00000186350	55652	None	None
ERV316A3_9q34.3a	HERV	ERV316A3	oneside	chr9	134547123	134548225	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL669970.2	ENSG00000227150	4513	AL669970.3	ENSG00000228877	1879	None	None
HERVL_9q34.3	HERV	HERVL	oneside	chr9	134924024	134928569	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FCN1	ENSG00000085265	6112	AL353611.1	ENSG00000236403	7955	None	None
ERVLE_9q34.3a	HERV	ERVLE	oneside	chr9	134957571	134959257	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353611.2	ENSG00000279935	33701	AL353611.1	ENSG00000236403	14364	None	None
HERVP71A_9q34.3	HERV	HERVP71A	oneside	chr9	135290605	135296267	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390778.2	ENSG00000233936	37897	C9orf62	ENSG00000178243	46982	None	None
ERV316A3_9q34.3b	HERV	ERV316A3	internal	chr9	135378186	135382106	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SOCS5P2	ENSG00000224682	65340	AL353615.1	ENSG00000235572	23902	None	None
HERVE_9q34.3	HERV	HERVE	prototype	chr9	135437085	135444492	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SOCS5P2	ENSG00000224682	2954	AL353615.1	ENSG00000235572	82801	None	chr9:135444229-135444253
MER4B_9q34.3	HERV	MER4B	unknown	chr9	135645972	135650448	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GLT6D1	ENSG00000204007	6432	LCN9	ENSG00000148386	12874	chr9:135648693-135648941	None
MER4_9q34.3	HERV	MER4	internal	chr9	135650751	135654625	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GLT6D1	ENSG00000204007	11211	LCN9	ENSG00000148386	8697	None	None
PABLB_9q34.3	HERV	PABLB	prototype	chr9	135656823	135662919	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GLT6D1	ENSG00000204007	17283	LCN9	ENSG00000148386	403	None	None
ERV316A3_9q34.3c	HERV	ERV316A3	internal	chr9	136315240	136318401	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC187	ENSG00000260220	8339	AC174065.1	ENSG00000262075	3902	None	None
ERVLE_9q34.3b	HERV	ERVLE	internal	chr9	136590693	136592272	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NALT1	ENSG00000237886	40800	AL590226.2	ENSG00000279141	19752	None	None
HERVL40_9q34.3	HERV	HERVL40	internal	chr9	136703426	136709202	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AGPAT2	ENSG00000169692	15969	DIPK1B	ENSG00000165716	3370	None	None
HML2_9q34.3	HERV	HML2	prototype	chr9	136780314	136789776	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM141	ENSG00000244187	1568	ATP6V1G1P3	ENSG00000224662	96	chr9:136785162-136785333	chr9:136785162-136785166,chr9:136788940-136788943
MER101_9q34.3	HERV	MER101	internal	chr9	136871520	136875014	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EDF1	ENSG00000107223	5212	TRAF2	ENSG00000127191	6898	None	None
HERVH_9q34.3	HERV	HERVH	oneside	chr9	137843940	137850465	+	coding	EHMT1	protein_coding	SENSE	ENSG00000181090	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_9q34.3d	HERV	ERV316A3	internal	chr9	137866355	137867499	-	noncoding	EHMT1	protein_coding	ANTISENSE	ENSG00000181090	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERV4_9q34.3a	HERV	HERV4	oneside	chr9	137931085	137933736	-	noncoding	CACNA1B	protein_coding	ANTISENSE	ENSG00000148408	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV4_9q34.3b	HERV	HERV4	oneside	chr9	137942978	137947440	-	noncoding	CACNA1B	protein_coding	ANTISENSE	ENSG00000148408	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_9q34.3	HERV	PRIMA41	oneside	chr9	138171763	138174909	+	noncoding	TUBBP5	transcribed_unprocessed_pseudogene	SENSE	ENSG00000159247	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_10p15.3	HERV	PRIMA41	oneside	chr10	49371	52548	-	noncoding	TUBB8	protein_coding	SENSE	ENSG00000261456	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_10p15.3	HERV	HERVL	oneside	chr10	98309	100387	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZMYND11	ENSG00000015171	34078	IL9RP2	ENSG00000232420	12044	None	None
HERVH_10p15.3a	HERV	HERVH	prototype	chr10	1349016	1354570	+	noncoding	ADARB2	protein_coding	ANTISENSE	ENSG00000185736	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_10p15.3	HERV	ERVLB4	oneside	chr10	1935437	1936442	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADARB2	ENSG00000185736	197912	AL355597.1	ENSG00000287653	21147	None	None
ERV316A3_10p15.3a	HERV	ERV316A3	internal	chr10	2127361	2128369	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL441943.2	ENSG00000227912	22111	RNU6-889P	ENSG00000252998	29092	None	None
ERV316A3_10p15.3b	HERV	ERV316A3	internal	chr10	2333120	2334147	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02645	ENSG00000234170	34414	LINC00701	ENSG00000234556	18045	None	None
ERV316A3_10p15.3c	HERV	ERV316A3	internal	chr10	2699376	2700731	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL713851.1	ENSG00000235281	80637	AL355361.1	ENSG00000286858	24088	None	None
ERV316A3_10p15.3d	HERV	ERV316A3	internal	chr10	2866608	2867138	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026396.1	ENSG00000231743	68883	AL355361.1	ENSG00000286858	138341	None	None
HERVH_10p15.3b	HERV	HERVH	oneside	chr10	2995554	2998180	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL731533.1	ENSG00000234182	11796	AC026396.1	ENSG00000231743	59113	None	None
ERV316A3_10p15.2	HERV	ERV316A3	oneside	chr10	3018193	3020902	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL731533.1	ENSG00000234182	5082	AL731533.3	ENSG00000287560	21633	None	None
ERVLE_10p15.2	HERV	ERVLE	internal	chr10	3696574	3699071	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450322.2	ENSG00000229672	49895	AL357833.1	ENSG00000236892	140260	None	None
ERVLE_10p15.1a	HERV	ERVLE	oneside	chr10	4244510	4246232	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00703	ENSG00000224382	138014	LINC00702	ENSG00000233117	598	None	None
ERVL_10p15.1	HERV	ERVL	internal	chr10	4486828	4488791	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022535.3	ENSG00000287246	38136	AC022535.2	ENSG00000286687	8658	None	None
ERVLE_10p15.1b	HERV	ERVLE	internal	chr10	4521869	4525470	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022535.2	ENSG00000286687	6625	MANCR	ENSG00000231298	124688	None	None
ERV316A3_10p15.1a	HERV	ERV316A3	internal	chr10	4590597	4591115	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022535.2	ENSG00000286687	75353	MANCR	ENSG00000231298	59043	None	None
ERVLE_10p15.1c	HERV	ERVLE	internal	chr10	4692733	4695068	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018978.1	ENSG00000287023	52778	LINC00705	ENSG00000225269	10011	None	None
MER41_10p15.1	HERV	MER41	oneside	chr10	4853677	4856881	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AKR1E2	ENSG00000165568	5615	AKR1C6P	ENSG00000151631	15020	None	None
LTR57_10p15.1	HERV	LTR57	oneside	chr10	4893756	4894710	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091817.1	ENSG00000238840	67726	AKR1C6P	ENSG00000151631	1781	None	None
MER61_10p15.1	HERV	MER61	prototype	chr10	4909131	4911590	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AKR1C6P	ENSG00000151631	17156	AC091817.1	ENSG00000238840	50846	None	chr10:4909367-4909386
HERVFRD_10p15.1a	HERV	HERVFRD	oneside	chr10	4928655	4930599	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AKR1C6P	ENSG00000151631	36680	AC091817.1	ENSG00000238840	31837	None	None
PABLB_10p15.1a	HERV	PABLB	internal	chr10	4948126	4952119	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AKR1C6P	ENSG00000151631	56151	AC091817.1	ENSG00000238840	10317	chr10:4949324-4949719	None
PABLB_10p15.1b	HERV	PABLB	internal	chr10	5014293	5015225	-	noncoding	AKR1C2	protein_coding	SENSE	ENSG00000151632	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr10:5015007-5015055
HERVFRD_10p15.1b	HERV	HERVFRD	oneside	chr10	5026904	5028848	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AKR1C3	ENSG00000196139	6506	AKR1C2	ENSG00000151632	8873	None	None
HML1_10p15.1	HERV	HML1	oneside	chr10	5035130	5038306	+	noncoding	AKR1C3	protein_coding	SENSE	ENSG00000196139	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr10:5035333-5035348
HML4_10p15.1	HERV	HML4	prototype	chr10	5038312	5047640	-	coding	AKR1C3	protein_coding	ANTISENSE	ENSG00000196139	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_10p15.1	HERV	HERVL	oneside	chr10	5115137	5116836	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AKR1C5P	ENSG00000225418	5251	AKR1C3	ENSG00000196139	7451	None	None
ERVLB4_10p15.1	HERV	ERVLB4	oneside	chr10	5143017	5146658	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AKR1C5P	ENSG00000225418	7791	AKR1C8P	ENSG00000264006	7482	None	None
LTR25_10p15.1a	HERV	LTR25	oneside	chr10	5163884	5169104	+	noncoding	AKR1C8P	protein_coding	ANTISENSE	ENSG00000264006	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_10p15.1	HERV	LTR19	oneside	chr10	5169111	5173521	-	noncoding	AKR1C8P	protein_coding	SENSE	ENSG00000264006	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_10p15.1b	HERV	LTR25	internal	chr10	5173612	5174968	+	noncoding	AKR1C8P	protein_coding	ANTISENSE	ENSG00000264006	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_10p15.1c	HERV	LTR25	oneside	chr10	5181140	5184422	+	noncoding	AKR1C8P	protein_coding	ANTISENSE	ENSG00000264006	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_10p15.1	HERV	MER4	internal	chr10	5263582	5265822	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02561	ENSG00000224034	211	AL355303.1	ENSG00000231039	174	None	None
ERVLE_10p15.1d	HERV	ERVLE	internal	chr10	5438991	5440667	-	noncoding	NET1	protein_coding	ANTISENSE	ENSG00000173848	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_10p15.1	HERV	HERVH	prototype	chr10	5470768	5477012	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NET1	ENSG00000173848	11712	CALML5	ENSG00000178372	21685	None	None
ERVLE_10p15.1e	HERV	ERVLE	oneside	chr10	5669708	5672616	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ASB13	ENSG00000196372	3113	TASOR2	ENSG00000108021	12222	None	None
ERV316A3_10p15.1b	HERV	ERV316A3	oneside	chr10	5676816	5677831	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TASOR2	ENSG00000108021	7007	ASB13	ENSG00000196372	10221	None	None
ERV316A3_10p15.1c	HERV	ERV316A3	oneside	chr10	6077139	6079309	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBM17	ENSG00000134453	9725	RPL32P23	ENSG00000214015	5221	None	None
ERV316A3_10p15.1d	HERV	ERV316A3	internal	chr10	6080817	6081641	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL32P23	ENSG00000214015	8899	RBM17	ENSG00000134453	7393	None	None
HERVH_10p14a	HERV	HERVH	prototype	chr10	6629579	6635541	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158210.1	ENSG00000285743	46972	LINC02648	ENSG00000225948	4233	None	None
HERVH_10p14b	HERV	HERVH	prototype	chr10	6797083	6802953	-	noncoding	AL158210.1,AL392086.2,LINC00707,AL392086.1	lncRNA,lncRNA,lncRNA,lncRNA	ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000285743,ENSG00000285988,ENSG00000238266,ENSG00000285845	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_10p14	HERV	HML2	prototype	chr10	6824179	6833641	-	noncoding	AL392086.2,LINC00707,AL392086.1,AL392086.3	lncRNA,lncRNA,lncRNA,lncRNA	ANTISENSE,ANTISENSE,ANTISENSE,SENSE	ENSG00000285988,ENSG00000238266,ENSG00000285845,ENSG00000287277	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10p14a	HERV	ERVLE	internal	chr10	7469101	7470236	+	noncoding	LINC02642	lncRNA	ANTISENSE	ENSG00000232591	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10p14a	HERV	ERV316A3	prototype	chr10	7813000	7816802	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATP5F1C	ENSG00000165629	5185	TAF3	ENSG00000165632	1703	None	None
ERVLE_10p14b	HERV	ERVLE	internal	chr10	9314231	9316202	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSP90AB7P	ENSG00000235838	405761	AL138773.1	ENSG00000287120	4459	None	None
ERVLE_10p14c	HERV	ERVLE	internal	chr10	9376793	9378935	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSP90AB7P	ENSG00000235838	343028	AL138773.1	ENSG00000287120	67021	None	None
HERVL_10p14	HERV	HERVL	oneside	chr10	9409359	9411315	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138773.1	ENSG00000287120	99587	HSP90AB7P	ENSG00000235838	310648	None	None
ERVLE_10p14d	HERV	ERVLE	internal	chr10	9694501	9697061	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSP90AB7P	ENSG00000235838	24902	AL138773.1	ENSG00000287120	384729	None	None
ERV316A3_10p14b	HERV	ERV316A3	internal	chr10	9755060	9759571	-	noncoding	LINC02663	lncRNA	SENSE	ENSG00000228636	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr10:9759216-9759233
ERV316A3_10p14c	HERV	ERV316A3	internal	chr10	9807928	9809808	-	noncoding	LINC02663	lncRNA	SENSE	ENSG00000228636	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10p14e	HERV	ERVLE	oneside	chr10	9812618	9814609	-	noncoding	LINC02663	lncRNA	SENSE	ENSG00000228636	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10p14f	HERV	ERVLE	oneside	chr10	10118351	10122792	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02670	ENSG00000224788	54849	ELOCP3	ENSG00000229919	51438	None	None
ERV316A3_10p14d	HERV	ERV316A3	oneside	chr10	10122943	10125618	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP3	ENSG00000229919	48612	LINC02670	ENSG00000224788	59441	None	None
ERVLE_10p14g	HERV	ERVLE	internal	chr10	10327633	10328495	-	noncoding	AL354916.2	lncRNA	SENSE	ENSG00000286439	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10p14h	HERV	ERVLE	internal	chr10	10387877	10391051	-	noncoding	CELF2-DT	lncRNA	SENSE	ENSG00000270111	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10p14i	HERV	ERVLE	internal	chr10	10444760	10446557	+	noncoding	CELF2-DT	lncRNA	ANTISENSE	ENSG00000270111	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_10p14	HERV	ERVLB4	internal	chr10	10766093	10767170	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136452.1	ENSG00000228997	9053	CELF2-DT	ENSG00000270111	303732	None	None
ERVL_10p14	HERV	ERVL	internal	chr10	11491174	11492266	+	noncoding	USP6NL	protein_coding	ANTISENSE	ENSG00000148429	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10p13a	HERV	ERVLE	internal	chr10	12893390	12895593	-	noncoding	AL353586.1	lncRNA	ANTISENSE	ENSG00000285520	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10p13b	HERV	ERVLE	internal	chr10	13003971	13007597	-	noncoding	CCDC3	protein_coding	SENSE	ENSG00000151468	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_10p13	HERV	MER61	prototype	chr10	13066618	13072809	+	noncoding	CCDC3	protein_coding	ANTISENSE	ENSG00000151468	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_10p13	HERV	HERVIP10FH	oneside	chr10	13079022	13081163	+	noncoding	CCDC3	protein_coding	ANTISENSE	ENSG00000151468	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_10p13a	HERV	HERVE	internal	chr10	14980513	14982700	-	noncoding	MEIG1	protein_coding	ANTISENSE	ENSG00000197889	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_10p13b	HERV	HERVE	internal	chr10	14990821	14994887	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR7E26P	ENSG00000228547	4163	MEIG1	ENSG00000197889	2771	chr10:14992355-14992603	chr10:14993405-14993425,chr10:14993431-14993450,chr10:14993510-14993548
HERVE_10p13c	HERV	HERVE	internal	chr10	15013301	15015356	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DCLRE1CP1	ENSG00000237470	14	OR7E115P	ENSG00000182531	4417	None	None
ERVLB4_10p13a	HERV	ERVLB4	oneside	chr10	15390575	15391895	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ITGA8	ENSG00000077943	122059	FAM171A1	ENSG00000148468	19286	None	None
ERVLB4_10p13b	HERV	ERVLB4	oneside	chr10	16067848	16069020	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358033.1	ENSG00000252537	61925	FTLP19	ENSG00000237913	2396	None	None
HERVL_10p13a	HERV	HERVL	oneside	chr10	16164982	16171514	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1075P	ENSG00000201260	36307	FTLP19	ENSG00000237913	93173	None	None
ERVLB4_10p13c	HERV	ERVLB4	oneside	chr10	16183678	16192827	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1075P	ENSG00000201260	14994	FTLP19	ENSG00000237913	111869	None	None
ERV316A3_10p13a	HERV	ERV316A3	internal	chr10	16234878	16236343	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1075P	ENSG00000201260	26951	LINC02654	ENSG00000226140	40528	None	None
HERVL_10p13b	HERV	HERVL	internal	chr10	16447745	16449831	-	noncoding	PTER	protein_coding	ANTISENSE	ENSG00000165983	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_10p13c	HERV	HERVL	oneside	chr10	16449911	16451399	-	noncoding	PTER	protein_coding	ANTISENSE	ENSG00000165983	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_10p13	HERV	HERV9	prototype	chr10	17011188	17018975	-	noncoding	CUBN	protein_coding	SENSE	ENSG00000107611	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10p13b	HERV	ERV316A3	oneside	chr10	17250750	17255221	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ST8SIA6	ENSG00000148488	60200	VIM	ENSG00000026025	13157	None	None
MER4_10p12.33	HERV	MER4	prototype	chr10	17379427	17385917	+	noncoding	ST8SIA6	protein_coding	ANTISENSE	ENSG00000148488	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr10:17379412-17379429
HERVH_10p12.33	HERV	HERVH	oneside	chr10	17630037	17632161	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STAM-AS1	ENSG00000260589	9123	HACD1	ENSG00000165996	12663	None	None
ERV316A3_10p12.33	HERV	ERV316A3	oneside	chr10	18006456	18008712	-	noncoding	SLC39A12,SLC39A12-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000148482,ENSG00000226083	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_10p12.31	HERV	HERVIP10F	oneside	chr10	18573539	18578111	+	noncoding	NSUN6	protein_coding	ANTISENSE	ENSG00000241058	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_10p12.31	HERV	ERVLB4	oneside	chr10	18874333	18879700	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512641.1	ENSG00000234244	125991	AL357520.1	ENSG00000234813	60801	None	None
MER34B_10p12.31	HERV	MER34B	unknown	chr10	19515943	19517902	-	noncoding	MALRD1	protein_coding	ANTISENSE	ENSG00000204740	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_10p12.31	HERV	HERVH	prototype	chr10	20119204	20124934	-	noncoding	PLXDC2	protein_coding	ANTISENSE	ENSG00000120594	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_10p12.31a	HERV	HERVL40	internal	chr10	21636985	21639125	-	noncoding	MLLT10	protein_coding	ANTISENSE	ENSG00000078403	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_10p12.31b	HERV	HERVL40	prototype	chr10	21813720	21815543	+	noncoding	DNAJC1	protein_coding	ANTISENSE	ENSG00000136770	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_10p12.31c	HERV	HERVL40	oneside	chr10	22096580	22098877	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADIPOR1P1	ENSG00000232497	64115	DNAJC1	ENSG00000136770	92811	None	None
HERV9_10p12.31	HERV	HERV9	prototype	chr10	22138857	22146509	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DNAJC1	ENSG00000136770	135088	ADIPOR1P1	ENSG00000232497	16483	None	None
ERV316A3_10p12.31	HERV	ERV316A3	oneside	chr10	22218395	22220897	+	noncoding	AL157831.2	lncRNA	SENSE	ENSG00000260205	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10p12.31	HERV	ERVLE	internal	chr10	22296514	22297364	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL31P45	ENSG00000233318	29168	COMMD3	ENSG00000148444	19022	None	None
ERV316A3_10p12.2	HERV	ERV316A3	oneside	chr10	22422045	22425685	+	noncoding	SPAG6	protein_coding	SENSE	ENSG00000077327	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_10p12.2	HERV	MER61	prototype	chr10	22825722	22831839	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARMC3	ENSG00000165309	96185	RNU6-413P	ENSG00000206842	38223	None	None
HERVW_10p12.2	HERV	HERVW	prototype	chr10	23296192	23302161	-	noncoding	C10orf67	protein_coding	SENSE	ENSG00000179133	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10p12.2a	HERV	ERVLE	internal	chr10	23337763	23339497	+	noncoding	C10orf67	protein_coding	ANTISENSE	ENSG00000179133	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10p12.2b	HERV	ERVLE	internal	chr10	23647486	23648710	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KIAA1217	ENSG00000120549	46036	AL512603.1	ENSG00000286442	61262	None	None
MER41_10p12.1	HERV	MER41	oneside	chr10	25121537	25124380	+	noncoding	AL512598.2,LINC01516	lncRNA,lncRNA	SENSE,SENSE	ENSG00000285859,ENSG00000231422	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_10p12.1a	HERV	HERVH	prototype	chr10	25716421	25722926	+	noncoding	LINC00836	lncRNA	SENSE	ENSG00000280809	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_10p12.1b	HERV	HERVH	prototype	chr10	25768956	25774917	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP306	ENSG00000223019	38894	LINC00836	ENSG00000280809	36021	None	None
ERVLB4_10p12.1a	HERV	ERVLB4	oneside	chr10	25880671	25885881	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-632P	ENSG00000251711	61245	AL358612.1	ENSG00000226304	38567	None	None
PABLA_10p12.1	HERV	PABLA	oneside	chr10	26332116	26334601	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAD2	ENSG00000136750	27558	AL355798.1	ENSG00000284951	44433	None	chr10:26332653-26332659,chr10:26332780-26332785
HERVL40_10p12.1	HERV	HERVL40	prototype	chr10	26778654	26786076	+	noncoding	ABI1	protein_coding	ANTISENSE	ENSG00000136754	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr10:26780970-26781530	None
PRIMA4_10p12.1	HERV	PRIMA4	mergeable*	chr10	26979406	26999995	-	noncoding	ANKRD26	protein_coding	SENSE	ENSG00000107890	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_10p12.1b	HERV	ERVLB4	prototype	chr10	27424404	27432620	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PTCHD3	ENSG00000182077	10036	RAB18	ENSG00000099246	71554	None	None
HERVH_10p12.1c	HERV	HERVH	prototype	chr10	27465310	27470937	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTCHD3	ENSG00000182077	50942	RAB18	ENSG00000099246	33237	None	None
ERV316A3_10p12.1a	HERV	ERV316A3	oneside	chr10	28003642	28005566	-	noncoding	AL390866.1,MRPS21P5	lncRNA,processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000233472,ENSG00000226395	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10p12.1a	HERV	ERVLE	internal	chr10	28005750	28007544	+	noncoding	AL390866.1	lncRNA	SENSE	ENSG00000233472	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10p12.1b	HERV	ERV316A3	internal	chr10	28419974	28421564	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02652	ENSG00000237128	11444	AC022021.1	ENSG00000222666	11723	None	None
ERVLE_10p12.1b	HERV	ERVLE	internal	chr10	28426133	28426801	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022021.1	ENSG00000222666	17882	LINC02652	ENSG00000237128	6207	None	None
ERVLE_10p12.1c	HERV	ERVLE	internal	chr10	28427138	28429462	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022021.1	ENSG00000222666	18887	LINC02652	ENSG00000237128	3546	None	None
ERV316A3_10p12.1c	HERV	ERV316A3	oneside	chr10	28847784	28849979	+	noncoding	LINC01517	lncRNA	SENSE	ENSG00000232624	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_10p11.23a	HERV	HARLEQUIN	oneside	chr10	29360435	29365069	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158167.1	ENSG00000287402	7958	LYZL1	ENSG00000120563	42107	None	None
HERVIP10FH_10p11.23	HERV	HERVIP10FH	oneside	chr10	29436720	29439409	-	noncoding	SVIL-AS1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000224597	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_10p11.23b	HERV	HARLEQUIN	prototype	chr10	30476115	30482420	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MAP3K8	ENSG00000107968	14282	HNRNPA1P32	ENSG00000213778	35196	None	None
ERV316A3_10p11.23	HERV	ERV316A3	internal	chr10	30514933	30515815	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAP3K8	ENSG00000107968	53100	HNRNPA1P32	ENSG00000213778	1801	None	None
HERVP71A_10p11.23	HERV	HERVP71A	oneside	chr10	30562477	30565904	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL63P	ENSG00000239744	6573	AL590068.2	ENSG00000230298	10795	None	None
ERVLE_10p11.23	HERV	ERVLE	internal	chr10	30793645	30797432	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02644	ENSG00000230720	69905	ZNF438	ENSG00000183621	22775	None	None
ERV316A3_10p11.22a	HERV	ERV316A3	oneside	chr10	31126525	31129023	-	noncoding	AL359546.1	lncRNA	ANTISENSE	ENSG00000287564	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10p11.22b	HERV	ERV316A3	oneside	chr10	31594473	31596944	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZEB1	ENSG00000148516	64659	AL161935.1	ENSG00000223834	5918	None	None
ERVLB4_10p11.22a	HERV	ERVLB4	oneside	chr10	31636489	31637631	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MACORIS	ENSG00000237797	55453	AL161935.2	ENSG00000231855	7890	None	None
ERVLE_10p11.22a	HERV	ERVLE	unknown	chr10	31739581	31744654	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MACORIS	ENSG00000237797	32193	AL353769.1	ENSG00000222412	11388	chr10:31741668-31741847	None
HERVFRD_10p11.22a	HERV	HERVFRD	oneside	chr10	31951962	31953948	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL34P19	ENSG00000230240	29937	ARHGAP12	ENSG00000165322	23086	None	None
HERVFRD_10p11.22b	HERV	HERVFRD	oneside	chr10	31958450	31963114	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL34P19	ENSG00000230240	20771	ARHGAP12	ENSG00000165322	29574	None	None
ERV316A3_10p11.22c	HERV	ERV316A3	internal	chr10	32004895	32005791	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL825P	ENSG00000239731	12514	KIF5B	ENSG00000170759	3224	None	None
HERVH_10p11.22	HERV	HERVH	prototype	chr10	32133699	32138852	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-22P	ENSG00000252482	34832	AL161932.2	ENSG00000234811	21910	chr10:32137028-32137170	None
ERV316A3_10p11.22d	HERV	ERV316A3	oneside	chr10	32437173	32439055	-	noncoding	AL391839.3	lncRNA	SENSE	ENSG00000286409	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_10p11.22	HERV	HERVL40	oneside	chr10	32440286	32441789	+	noncoding	AL391839.3	lncRNA	ANTISENSE	ENSG00000286409	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10p11.22b	HERV	ERVLE	internal	chr10	32751007	32752580	-	noncoding	CCDC7	protein_coding	ANTISENSE	ENSG00000216937	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_10p11.22b	HERV	ERVLB4	internal	chr10	32761330	32766853	+	noncoding	CCDC7	protein_coding	SENSE	ENSG00000216937	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_10p11.22a	HERV	HERVL	oneside	chr10	32797694	32803046	-	coding	CCDC7	protein_coding	ANTISENSE	ENSG00000216937	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_10p11.22b	HERV	HERVL	prototype	chr10	32825222	32830177	+	noncoding	CCDC7	protein_coding	SENSE	ENSG00000216937	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_10p11.22	HERV	HERVL74	internal	chr10	32890892	32892954	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ITGB1	ENSG00000150093	7364	AL365203.2	ENSG00000273038	1581	None	chr10:32892458-32892478
ERV316A3_10p11.22e	HERV	ERV316A3	oneside	chr10	33580589	33586855	-	noncoding	LINC02628	lncRNA	SENSE	ENSG00000226412	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10p11.22c	HERV	ERVLE	internal	chr10	33752412	33758000	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00838	ENSG00000261683	1713	AL450313.1	ENSG00000203565	42544	None	None
HERVE_10p11.21	HERV	HERVE	prototype	chr10	34969035	34975620	+	noncoding	LINC02635	lncRNA	SENSE	ENSG00000283000	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr10:34969202-34969367	None
ERVLB4_10p11.21	HERV	ERVLB4	oneside	chr10	34999279	35001258	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02635	ENSG00000283000	23701	CUL2	ENSG00000108094	7293	None	None
ERV316A3_10p11.21a	HERV	ERV316A3	oneside	chr10	35223108	35224381	+	noncoding	LINC02634	lncRNA	ANTISENSE	ENSG00000233200	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10p11.21b	HERV	ERV316A3	internal	chr10	35273618	35277559	-	noncoding	CCNY	protein_coding	ANTISENSE	ENSG00000108100	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_10p11.21	HERV	HERVH	prototype	chr10	35401605	35408752	-	noncoding	CCNY	protein_coding	ANTISENSE	ENSG00000108100	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_10p11.21	HERV	LTR57	internal	chr10	35522654	35523343	+	noncoding	CCNY	protein_coding	SENSE	ENSG00000108100	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_10p11.21	HERV	HERVL	internal	chr10	36473569	36476361	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590730.1	ENSG00000237002	31177	NAMPTP1	ENSG00000229644	45360	None	None
ERV316A3_10p11.21c	HERV	ERV316A3	oneside	chr10	36728483	36730084	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390061.1	ENSG00000238176	210025	AL354660.1	ENSG00000207271	102345	None	None
ERV316A3_10p11.21d	HERV	ERV316A3	internal	chr10	36730376	36731555	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390061.1	ENSG00000238176	208554	AL354660.1	ENSG00000207271	104238	None	None
HERV9_10p11.21	HERV	HERV9	prototype	chr10	37274421	37285722	-	noncoding	ANKRD30A,LINC00993	protein_coding,transcribed_unprocessed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000148513,ENSG00000235687	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_10p11.21	HERV	HUERSP3	prototype	chr10	37320772	37326042	+	noncoding	ANKRD30A,LINC00993	protein_coding,transcribed_unprocessed_pseudogene	SENSE,SENSE	ENSG00000148513,ENSG00000235687	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10p11.21e	HERV	ERV316A3	oneside	chr10	37449302	37451140	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANKRD30A	ENSG00000148513	65191	TACC1P1	ENSG00000224920	71871	None	None
ERVLE_10p11.21	HERV	ERVLE	internal	chr10	37784211	37786335	+	noncoding	ZNF248	protein_coding	ANTISENSE	ENSG00000198105	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10p11.21f	HERV	ERV316A3	internal	chr10	37930138	37934250	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF25	ENSG00000175395	15323	ZNF33CP	ENSG00000235197	33472	None	None
HERVS71_10p11.21	HERV	HERVS71	prototype	chr10	37934819	37943976	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF33CP	ENSG00000235197	38153	ZNF25	ENSG00000175395	5597	None	None
LTR57_10p11.1	HERV	LTR57	internal	chr10	38229084	38229937	-	noncoding	AL117339.5	protein_coding	ANTISENSE	ENSG00000283930	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_10p11.1	HERV	MER4B	internal	chr10	38229938	38230139	-	noncoding	AL117339.5	protein_coding	ANTISENSE	ENSG00000283930	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_10p11.1	HERV	MER61	internal	chr10	38230526	38231180	+	noncoding	AL117339.5	protein_coding	SENSE	ENSG00000283930	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10p11.1a	HERV	ERV316A3	internal	chr10	38626800	38628116	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133173.2	ENSG00000277133	9456	PABPC1P12	ENSG00000225638	7792	None	None
ERV316A3_10p11.1b	HERV	ERV316A3	oneside	chr10	38630974	38632555	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133173.2	ENSG00000277133	13630	PABPC1P12	ENSG00000225638	3353	None	None
HERVK11_10p11.1	HERV	HERVK11	prototype	chr10	39042475	39051555	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590623.1	ENSG00000233832	259367	KSR1P1	ENSG00000229485	3097755	None	None
HML1_10p11.1	HERV	HML1	prototype	chr10	39080463	39083420	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KSR1P1	ENSG00000229485	3065890	AL590623.1	ENSG00000233832	297355	None	None
HERVKC4_10p11.1	HERV	HERVKC4	oneside	chr10	39107015	39112474	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590623.1	ENSG00000233832	323907	KSR1P1	ENSG00000229485	3036836	None	None
HML3_10p11.1a	HERV	HML3	oneside	chr10	39197740	39202524	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KSR1P1	ENSG00000229485	2946786	AL590623.1	ENSG00000233832	414632	None	None
HERVS71_10p11.1	HERV	HERVS71	prototype	chr10	39202525	39209158	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	KSR1P1	ENSG00000229485	2940152	AL590623.1	ENSG00000233832	419417	None	None
HML3_10p11.1b	HERV	HML3	oneside	chr10	39209161	39210871	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KSR1P1	ENSG00000229485	2938439	AL590623.1	ENSG00000233832	426053	None	None
HERVL_10q11.21a	HERV	HERVL	prototype	chr10	42186770	42190779	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGKV1OR10-1	ENSG00000237592	979	AL031601.1	ENSG00000271650	19211	None	None
ERV316A3_10q11.21a	HERV	ERV316A3	oneside	chr10	42285279	42286834	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX322639.1	ENSG00000215146	45032	PABPC1P8	ENSG00000228755	3460	None	None
ERV316A3_10q11.21b	HERV	ERV316A3	internal	chr10	42289681	42290997	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX322639.1	ENSG00000215146	40869	PABPC1P8	ENSG00000228755	7862	None	None
MER41_10q11.21	HERV	MER41	prototype	chr10	42376380	42379774	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCNYL2	ENSG00000182632	28394	BX322639.1	ENSG00000215146	8406	None	None
HERVFH19_10q11.21	HERV	HERVFH19	prototype	chr10	42384057	42393513	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCNYL2	ENSG00000182632	14655	BX322639.1	ENSG00000215146	16083	None	None
MER61_10q11.21	HERV	MER61	oneside	chr10	42395784	42396996	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCNYL2	ENSG00000182632	11172	BX322639.1	ENSG00000215146	27810	None	None
MER4B_10q11.21	HERV	MER4B	internal	chr10	42397375	42398000	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX322639.1	ENSG00000215146	29401	CCNYL2	ENSG00000182632	10168	None	None
HML3_10q11.21a	HERV	HML3	prototype	chr10	42486524	42494602	+	noncoding	LINC00839	lncRNA	SENSE	ENSG00000185904	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_10q11.21b	HERV	HML3	prototype	chr10	42494899	42502222	+	noncoding	LINC00839	lncRNA	SENSE	ENSG00000185904	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_10q11.21c	HERV	HML3	prototype	chr10	42506072	42510738	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF37BP	ENSG00000234420	2772	LINC00839	ENSG00000185904	10735	None	None
ERVLB4_10q11.21	HERV	ERVLB4	oneside	chr10	42844649	42849633	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02623	ENSG00000234944	21888	BMS1	ENSG00000165733	9712	None	None
HML1_10q11.21	HERV	HML1	internal	chr10	43299360	43300924	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02633	ENSG00000224265	22741	RASGEF1A	ENSG00000198915	32441	None	None
HML5_10q11.21	HERV	HML5	prototype	chr10	43300927	43306616	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02633	ENSG00000224265	17049	RASGEF1A	ENSG00000198915	34008	None	chr10:43305897-43305905
ERV316A3_10q11.21c	HERV	ERV316A3	internal	chr10	43325844	43326859	-	noncoding	LINC02633,AC068707.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000224265,ENSG00000285712	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL74_10q11.21	HERV	HERVL74	internal	chr10	43507837	43509420	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF487	ENSG00000243660	24656	AL450326.2	ENSG00000236114	13836	None	None
HERVL_10q11.21b	HERV	HERVL	prototype	chr10	43509421	43516879	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450326.2	ENSG00000236114	6377	ZNF487	ENSG00000243660	26240	None	None
HERV3_10q11.21a	HERV	HERV3	oneside	chr10	43583451	43586830	-	noncoding	AL450326.3	lncRNA	SENSE	ENSG00000287852	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_10q11.21d	HERV	HML3	prototype	chr10	43586832	43591985	+	noncoding	AL450326.3	lncRNA	ANTISENSE	ENSG00000287852	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_10q11.21b	HERV	HERV3	oneside	chr10	43591986	43597077	-	noncoding	AL450326.3	lncRNA	SENSE	ENSG00000287852	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr10:43596624-43596758	None
ERVLE_10q11.21	HERV	ERVLE	internal	chr10	43898266	43899656	-	noncoding	LINC00840	lncRNA	ANTISENSE	ENSG00000226808	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_10q11.21	HERV	LTR19	oneside	chr10	45274512	45278972	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR13A1	ENSG00000256574	23326	OR6D1P	ENSG00000224402	11260	None	None
HML6_10q11.21	HERV	HML6	prototype	chr10	45278976	45286905	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR6D1P	ENSG00000224402	15724	OR13A1	ENSG00000256574	15393	None	None
HERVL_10q11.21c	HERV	HERVL	oneside	chr10	45336528	45341477	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR13A1	ENSG00000256574	20920	ALOX5	ENSG00000012779	32699	None	None
HERVH_10q11.22	HERV	HERVH	prototype	chr10	45571174	45576085	+	noncoding	MARCHF8	protein_coding	ANTISENSE	ENSG00000165406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_10q11.22a	HERV	MER4	oneside	chr10	46137666	46140632	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANTXRLP1	ENSG00000263482	93253	AGAP7P	ENSG00000264204	6308	None	None
ERVL_10q11.22a	HERV	ERVL	oneside	chr10	46157064	46158485	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANTXRLP1	ENSG00000263482	75400	AGAP7P	ENSG00000264204	25706	None	None
MER4_10q11.22b	HERV	MER4	oneside	chr10	46208910	46211877	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AGAP7P	ENSG00000264204	77552	ANTXRLP1	ENSG00000263482	22008	None	None
MER101_10q11.22a	HERV	MER101	oneside	chr10	46258213	46262072	+	noncoding	ANTXRLP1	unprocessed_pseudogene	ANTISENSE	ENSG00000263482	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10q11.22a	HERV	ERVLE	internal	chr10	46471430	46471996	+	noncoding	AC244230.2	lncRNA	SENSE	ENSG00000285402	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_10q11.22b	HERV	MER101	internal	chr10	46483419	46484867	+	noncoding	AC244230.2	lncRNA	SENSE	ENSG00000285402	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_10q11.22c	HERV	MER101	internal	chr10	46485290	46486500	+	noncoding	AC244230.2	lncRNA	SENSE	ENSG00000285402	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_10q11.22c	HERV	MER4	oneside	chr10	46844156	46847115	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FRMPD2B	ENSG00000150175	23743	AGAP13P	ENSG00000243289	11680	None	None
ERVL_10q11.22b	HERV	ERVL	oneside	chr10	46863173	46864574	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FRMPD2B	ENSG00000150175	6284	AGAP13P	ENSG00000243289	30697	None	None
ERVLE_10q11.22b	HERV	ERVLE	oneside	chr10	46952098	46952980	-	noncoding	PTPN20	protein_coding	ANTISENSE	ENSG00000204179	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_10q11.22a	HERV	ERVLB4	oneside	chr10	46976966	46982057	+	noncoding	PTPN20	protein_coding	SENSE	ENSG00000204179	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10q11.22a	HERV	ERV316A3	oneside	chr10	47288922	47291726	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GDF10	ENSG00000266524	8471	PTPN20	ENSG00000204179	286434	None	None
ERV316A3_10q11.22b	HERV	ERV316A3	oneside	chr10	47292217	47295677	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GDF10	ENSG00000266524	4520	PTPN20	ENSG00000204179	289729	None	None
MER101_10q11.22d	HERV	MER101	internal	chr10	47898179	47901255	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC245041.2	ENSG00000276850	6809	FO681492.1	ENSG00000277758	134587	None	None
ERVLE_10q11.22c	HERV	ERVLE	internal	chr10	47912664	47913230	-	noncoding	AC245041.2	lncRNA	SENSE	ENSG00000276850	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_10q11.22b	HERV	ERVLB4	oneside	chr10	48069799	48074884	-	coding	PTPN20CP	unprocessed_pseudogene	SENSE	ENSG00000278561	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10q11.22d	HERV	ERVLE	oneside	chr10	48098835	48099717	+	noncoding	PTPN20CP	unprocessed_pseudogene	ANTISENSE	ENSG00000278561	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_10q11.22	HERV	MER34B	prototype	chr10	48226479	48231674	+	noncoding	FRMPD2	protein_coding	ANTISENSE	ENSG00000170324	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr10:48231240-48231558	None
ERVLB4_10q11.22c	HERV	ERVLB4	oneside	chr10	48282094	48283328	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS6P14	ENSG00000225482	9371	FRMPD2	ENSG00000170324	7398	None	chr10:48283001-48283012
HERVP71A_10q11.22	HERV	HERVP71A	prototype	chr10	48330535	48335179	-	noncoding	MAPK8	protein_coding	ANTISENSE	ENSG00000107643	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_10q11.23	HERV	HERVW	oneside	chr10	48665296	48667004	-	noncoding	AC068898.1	lncRNA	SENSE	ENSG00000236800	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_10q11.23	HERV	HERVL	prototype	chr10	48990714	48997769	-	noncoding	AC060234.2,AC060234.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000233665,ENSG00000226576	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_10q11.23	HERV	MER41	prototype	chr10	49543227	49550170	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB1P50	ENSG00000271237	1138	ERCC6	ENSG00000225830	3689	None	None
ERV316A3_10q11.23a	HERV	ERV316A3	oneside	chr10	49560163	49561809	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB1P50	ENSG00000271237	7511	CHAT	ENSG00000070748	47286	None	None
ERVLB4_10q11.23a	HERV	ERVLB4	internal	chr10	49562050	49564929	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CHAT	ENSG00000070748	44166	HMGB1P50	ENSG00000271237	9398	None	None
MER4B_10q11.23	HERV	MER4B	prototype	chr10	49790561	49796780	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL21P89	ENSG00000229870	18316	MAPK6P6	ENSG00000226389	17262	None	None
ERV316A3_10q11.23b	HERV	ERV316A3	oneside	chr10	50159947	50162451	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC9A3P1	ENSG00000233011	7660	ASAH2	ENSG00000188611	20327	None	None
ERV316A3_10q11.23c	HERV	ERV316A3	oneside	chr10	50777832	50780339	-	noncoding	ASAH2B	protein_coding	ANTISENSE	ENSG00000204147	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_10q11.23b	HERV	ERVLB4	internal	chr10	50953059	50954697	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC58P2	ENSG00000236944	8296	A1CF	ENSG00000148584	67384	None	None
HERVL_10q21.1a	HERV	HERVL	prototype	chr10	51406790	51410669	-	coding	PRKG1	protein_coding	ANTISENSE	ENSG00000185532	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_10q21.1a	HERV	HERVH	prototype	chr10	52033757	52039561	-	noncoding	PRKG1	protein_coding	ANTISENSE	ENSG00000185532	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr10:52039216-52039610	chr10:52039216-52039217
HERVS71_10q21.1	HERV	HERVS71	prototype	chr10	52946389	52956110	-	noncoding	AC073174.1	lncRNA	SENSE	ENSG00000285958	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr10:52955438-52955443,chr10:52955450-52955460,chr10:52955469-52955476
HERV30_10q21.1	HERV	HERV30	prototype	chr10	53025174	53030661	-	noncoding	LINC02672	lncRNA	SENSE	ENSG00000227121	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr10:53027194-53027205,chr10:53030017-53030032,chr10:53030064-53030075,chr10:53030096-53030117
ERV316A3_10q21.1a	HERV	ERV316A3	internal	chr10	53184226	53190464	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC036101.1	ENSG00000226296	100608	SNRPEP8	ENSG00000231399	145682	None	None
HML3_10q21.1	HERV	HML3	prototype	chr10	53335597	53342907	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP318	ENSG00000252161	115290	AC036101.1	ENSG00000226296	24532	None	None
HERVH_10q21.1b	HERV	HERVH	oneside	chr10	53492723	53493946	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL365496.1	ENSG00000233805	272454	RNA5SP318	ENSG00000252161	34435	None	None
HERVH_10q21.1c	HERV	HERVH	oneside	chr10	53500029	53504727	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL365496.1	ENSG00000233805	261673	RNA5SP318	ENSG00000252161	41741	None	None
HERVL40_10q21.1	HERV	HERVL40	internal	chr10	53786677	53788540	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PCDH15	ENSG00000150275	14231	AL365496.1	ENSG00000233805	20063	None	None
HERVL_10q21.1b	HERV	HERVL	oneside	chr10	54102316	54105755	-	noncoding	PCDH15	protein_coding	SENSE	ENSG00000150275	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_10q21.1d	HERV	HERVH	prototype	chr10	54166676	54172501	+	noncoding	PCDH15	protein_coding	ANTISENSE	ENSG00000150275	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10q21.1a	HERV	ERVLE	internal	chr10	54388165	54389351	-	noncoding	PCDH15	protein_coding	SENSE	ENSG00000150275	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10q21.1b	HERV	ERVLE	internal	chr10	54510198	54511128	+	noncoding	PCDH15,AL353784.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000150275,ENSG00000234173	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_10q21.1	HERV	HUERSP2	prototype	chr10	55262253	55267089	+	noncoding	PCDH15,AC016822.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000150275,ENSG00000236744	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_10q21.1a	HERV	ERVLB4	oneside	chr10	55302407	55303569	-	noncoding	PCDH15,AC016822.1	protein_coding,lncRNA	SENSE,SENSE	ENSG00000150275,ENSG00000236744	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10q21.1b	HERV	ERV316A3	internal	chr10	55557450	55558494	+	noncoding	PCDH15,AC016822.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000150275,ENSG00000236744	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10q21.1c	HERV	ERV316A3	internal	chr10	55712206	55714124	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069545.1	ENSG00000270541	32427	GAPDHP21	ENSG00000236993	43856	None	None
HERVL74_10q21.1	HERV	HERVL74	oneside	chr10	55818625	55826019	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069545.1	ENSG00000270541	71717	ZWINT	ENSG00000122952	531208	None	None
HERVH_10q21.1e	HERV	HERVH	unknown	chr10	55971512	55978521	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069545.1	ENSG00000270541	224604	ZWINT	ENSG00000122952	378706	None	None
ERVLE_10q21.1c	HERV	ERVLE	internal	chr10	56056954	56057690	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZWINT	ENSG00000122952	299537	AC069545.1	ENSG00000270541	310046	None	None
ERVLB4_10q21.1b	HERV	ERVLB4	oneside	chr10	56422138	56426878	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010996.1	ENSG00000287016	57424	AC025039.1	ENSG00000238707	169085	None	None
ERV316A3_10q21.1d	HERV	ERV316A3	oneside	chr10	56560477	56563122	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010996.1	ENSG00000287016	195763	AC025039.1	ENSG00000238707	32841	None	None
HERV9_10q21.1a	HERV	HERV9	oneside	chr10	56572703	56576045	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC025039.1	ENSG00000238707	19918	AC010996.1	ENSG00000287016	207989	None	None
LTR57_10q21.1	HERV	LTR57	prototype	chr10	56623935	56629208	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3924	ENSG00000264747	675271	AC025039.1	ENSG00000238707	27904	None	None
ERV316A3_10q21.1e	HERV	ERV316A3	oneside	chr10	56967253	56969230	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3924	ENSG00000264747	335249	AC025039.1	ENSG00000238707	371222	None	None
HERVL18_10q21.1a	HERV	HERVL18	prototype	chr10	57014854	57018042	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025039.1	ENSG00000238707	418823	MIR3924	ENSG00000264747	286437	None	None
HERVL_10q21.1c	HERV	HERVL	prototype	chr10	57134851	57141583	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025039.1	ENSG00000238707	538820	MIR3924	ENSG00000264747	162896	None	None
HUERSP3_10q21.1	HERV	HUERSP3	prototype	chr10	57338845	57345104	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL731534.1	ENSG00000235810	168053	MIR3924	ENSG00000264747	34286	None	None
ERV316A3_10q21.1f	HERV	ERV316A3	internal	chr10	57406206	57407667	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL731534.1	ENSG00000235810	105490	MIR3924	ENSG00000264747	101647	None	None
HUERSP3B_10q21.1a	HERV	HUERSP3B	prototype	chr10	57574785	57581311	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006484.1	ENSG00000223841	373984	AL731534.1	ENSG00000235810	61360	None	None
HUERSP3B_10q21.1b	HERV	HUERSP3B	prototype	chr10	57788071	57795666	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL731534.1	ENSG00000235810	274646	AC006484.1	ENSG00000223841	159629	None	chr10:57789408-57789415
HERVL18_10q21.1b	HERV	HERVL18	oneside	chr10	57816710	57819018	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL731534.1	ENSG00000235810	303285	AC006484.1	ENSG00000223841	136277	None	None
HERV9_10q21.1b	HERV	HERV9	prototype	chr10	57832365	57842204	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL731534.1	ENSG00000235810	318940	AC006484.1	ENSG00000223841	113091	None	None
ERV316A3_10q21.1g	HERV	ERV316A3	oneside	chr10	58415047	58416306	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BICC1	ENSG00000122870	96566	TFAM	ENSG00000108064	15827	None	None
HERVL18_10q21.1c	HERV	HERVL18	prototype	chr10	58615322	58618645	+	noncoding	BICC1	protein_coding	SENSE	ENSG00000122870	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_10q21.1f	HERV	HERVH	prototype	chr10	58860995	58867331	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP196	ENSG00000252076	1853	BICC1	ENSG00000122870	29560	None	None
ERV316A3_10q21.1h	HERV	ERV316A3	internal	chr10	59096313	59096864	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRAF6P1	ENSG00000226557	39761	RPLP1P10	ENSG00000226888	7274	None	None
HARLEQUIN_10q21.2a	HERV	HARLEQUIN	prototype	chr10	59726526	59734042	-	coding	SLC16A9	protein_coding	SENSE	ENSG00000165449	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_10q21.2b	HERV	HARLEQUIN	oneside	chr10	59765313	59771489	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC6	ENSG00000108091	17258	MRLN	ENSG00000227877	9272	None	chr10:59771131-59771138
HERVW_10q21.2a	HERV	HERVW	oneside	chr10	61033703	61035784	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM26	ENSG00000196932	370858	LINC00845	ENSG00000227244	7283	None	None
HERVW_10q21.2b	HERV	HERVW	oneside	chr10	61035862	61039913	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM26	ENSG00000196932	366729	LINC00845	ENSG00000227244	9442	None	None
MER4_10q21.2a	HERV	MER4	internal	chr10	61230768	61233752	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00845	ENSG00000227244	204348	TMEM26	ENSG00000196932	172890	None	None
MER4_10q21.2b	HERV	MER4	oneside	chr10	61233787	61235423	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00845	ENSG00000227244	207367	TMEM26	ENSG00000196932	171219	None	None
ERV316A3_10q21.2a	HERV	ERV316A3	oneside	chr10	61241817	61245921	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM26	ENSG00000196932	160721	LINC00845	ENSG00000227244	215397	None	None
PABLB_10q21.2	HERV	PABLB	internal	chr10	61541360	61547801	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL356952.1	ENSG00000288052	44861	CABCOCO1	ENSG00000183346	115160	None	chr10:61545490-61545502
HERVL_10q21.2	HERV	HERVL	oneside	chr10	61565588	61571867	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CABCOCO1	ENSG00000183346	91094	AL356952.1	ENSG00000288052	69089	None	None
ERV316A3_10q21.2b	HERV	ERV316A3	internal	chr10	61803476	61805156	-	noncoding	LINC02625	lncRNA	SENSE	ENSG00000233643	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_10q21.2	HERV	ERVLB4	oneside	chr10	61805154	61807714	+	noncoding	LINC02625	lncRNA	ANTISENSE	ENSG00000233643	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_10q21.2	HERV	MER41	prototype	chr10	62339890	62344894	-	noncoding	AC024597.1	lncRNA	SENSE	ENSG00000288011	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVL_10q21.2	HERV	ERVL	oneside	chr10	62356338	62360585	+	noncoding	AC024597.1	lncRNA	ANTISENSE	ENSG00000288011	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10q21.2	HERV	ERVLE	internal	chr10	62421204	62423037	+	noncoding	ZNF365,AC024598.1	protein_coding,lncRNA	SENSE,SENSE	ENSG00000138311,ENSG00000285837	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_10q21.3	HERV	MER4B	internal	chr10	63366574	63368220	+	noncoding	JMJD1C	protein_coding	ANTISENSE	ENSG00000171988	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_10q21.3	HERV	HML3	oneside	chr10	63847430	63851681	+	coding	AC013287.1	lncRNA	SENSE	ENSG00000228566	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_10q21.3	HERV	HERVFRD	prototype	chr10	63985474	63991294	+	noncoding	AC013287.1	lncRNA	SENSE	ENSG00000228566	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10q21.3	HERV	ERV316A3	oneside	chr10	64387510	64388470	-	noncoding	AC013287.1	lncRNA	ANTISENSE	ENSG00000228566	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_10q21.3	HERV	HERV9	oneside	chr10	64779896	64785347	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANXA2P3	ENSG00000216740	40225	CYP2C61P	ENSG00000270648	16724	None	None
ERVLB4_10q21.3a	HERV	ERVLB4	oneside	chr10	64801100	64804283	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANXA2P3	ENSG00000216740	21289	CYP2C61P	ENSG00000270648	37928	None	None
ERVLB4_10q21.3b	HERV	ERVLB4	oneside	chr10	64810969	64813272	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANXA2P3	ENSG00000216740	12300	CYP2C61P	ENSG00000270648	47797	None	None
HERVL_10q21.3a	HERV	HERVL	oneside	chr10	64888022	64893215	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANXA2P3	ENSG00000216740	61443	LINC02671	ENSG00000224714	7921	None	None
ERVLE_10q21.3a	HERV	ERVLE	internal	chr10	64998282	64999946	+	noncoding	LINC02671	lncRNA	ANTISENSE	ENSG00000224714	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_10q21.3c	HERV	ERVLB4	internal	chr10	65094070	65095497	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NEK4P3	ENSG00000270754	39067	AL513321.2	ENSG00000282906	28170	None	None
HERVK11_10q21.3	HERV	HERVK11	oneside	chr10	65105943	65112846	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL513321.2	ENSG00000282906	10821	NEK4P3	ENSG00000270754	50940	None	None
ERVLB4_10q21.3d	HERV	ERVLB4	prototype	chr10	65407324	65412620	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL592466.1	ENSG00000235356	92244	LINC01515	ENSG00000228065	157718	None	None
HERVL_10q21.3b	HERV	HERVL	prototype	chr10	65503563	65509682	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01515	ENSG00000228065	60656	AL592466.1	ENSG00000235356	188483	None	None
MER61_10q21.3	HERV	MER61	oneside	chr10	65570387	65573112	+	noncoding	LINC01515	lncRNA	SENSE	ENSG00000228065	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr10:65570508-65570542,chr10:65570551-65570564
LTR57_10q21.3	HERV	LTR57	internal	chr10	65662541	65664180	+	noncoding	LINC01515	lncRNA	SENSE	ENSG00000228065	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_10q21.3e	HERV	ERVLB4	prototype	chr10	65740034	65743215	-	noncoding	LINC01515	lncRNA	ANTISENSE	ENSG00000228065	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_10q21.3	HERV	HARLEQUIN	oneside	chr10	67157300	67159393	+	noncoding	CTNNA3	protein_coding	ANTISENSE	ENSG00000183230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10q21.3b	HERV	ERVLE	internal	chr10	67296213	67297896	-	noncoding	CTNNA3	protein_coding	SENSE	ENSG00000183230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10q21.3c	HERV	ERVLE	internal	chr10	67298199	67299702	-	noncoding	CTNNA3	protein_coding	SENSE	ENSG00000183230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_10q21.3f	HERV	ERVLB4	internal	chr10	67300265	67302806	-	noncoding	CTNNA3	protein_coding	SENSE	ENSG00000183230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10q21.3d	HERV	ERVLE	internal	chr10	67393090	67394301	+	noncoding	CTNNA3	protein_coding	ANTISENSE	ENSG00000183230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_10q22.1	HERV	HML3	prototype	chr10	68861092	68868584	-	noncoding	STOX1	protein_coding	ANTISENSE	ENSG00000165730	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10q22.1a	HERV	ERV316A3	prototype	chr10	69105107	69112780	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SRGN	ENSG00000122862	302	VPS26A	ENSG00000122958	10732	None	None
ERV316A3_10q22.1b	HERV	ERV316A3	oneside	chr10	69585879	69587677	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450311.1	ENSG00000236154	8725	MTATP6P23	ENSG00000230755	2203	None	None
HERVL18_10q22.1	HERV	HERVL18	prototype	chr10	70648593	70652094	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRF1	ENSG00000180644	45834	ADAMTS14	ENSG00000138316	20412	None	None
HERVL_10q22.1	HERV	HERVL	prototype	chr10	71016728	71023071	-	noncoding	AC073176.2	lncRNA	ANTISENSE	ENSG00000285300	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10q22.1	HERV	ERVLE	internal	chr10	71141729	71143479	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UNC5B	ENSG00000107731	69091	AC073176.2	ENSG00000285300	63919	None	None
PABLA_10q22.1	HERV	PABLA	internal	chr10	71916717	71919974	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CHST3	ENSG00000122863	44421	AC073370.1	ENSG00000230526	37610	None	chr10:71919492-71919497
HARLEQUIN_10q22.1	HERV	HARLEQUIN	prototype	chr10	71939378	71946508	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073370.1	ENSG00000230526	60271	CHST3	ENSG00000122863	17887	None	None
HERVFH21_10q22.1a	HERV	HERVFH21	oneside	chr10	71949058	71955165	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CHST3	ENSG00000122863	9230	AC073370.1	ENSG00000230526	69951	None	None
HML1_10q22.1	HERV	HML1	oneside	chr10	71955167	71961407	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073370.1	ENSG00000230526	76060	CHST3	ENSG00000122863	2988	None	chr10:71956768-71956775
HERVFH21_10q22.1b	HERV	HERVFH21	oneside	chr10	71961542	71963199	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CHST3	ENSG00000122863	1196	AC073370.1	ENSG00000230526	82435	chr10:71962885-71963237	None
MER4_10q22.2	HERV	MER4	oneside	chr10	74773653	74775645	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC063962.1	ENSG00000272748	45965	FAM32CP	ENSG00000213525	28946	None	None
PRIMA41_10q22.2	HERV	PRIMA41	prototype	chr10	74775646	74783112	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FAM32CP	ENSG00000213525	30939	AC063962.1	ENSG00000272748	38498	None	None
HERVH_10q22.3a	HERV	HERVH	prototype	chr10	76818221	76823736	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC024603.1	ENSG00000269256	257227	AC013738.1	ENSG00000252888	11641	None	None
ERVLE_10q22.3	HERV	ERVLE	internal	chr10	77741804	77742493	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1266P	ENSG00000199664	34458	AL731556.2	ENSG00000277981	2789	None	None
ERV316A3_10q22.3a	HERV	ERV316A3	prototype	chr10	78150486	78158609	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL731555.1	ENSG00000283096	18319	GNAI2P2	ENSG00000231957	80948	None	None
ERVL_10q22.3	HERV	ERVL	internal	chr10	78638226	78639281	-	noncoding	AC012560.2	lncRNA	ANTISENSE	ENSG00000282863	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10q22.3b	HERV	ERV316A3	prototype	chr10	78822312	78828476	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZMIZ1-AS1	ENSG00000224596	114852	AC016820.1	ENSG00000228683	125290	None	None
ERV316A3_10q22.3c	HERV	ERV316A3	prototype	chr10	79319465	79322018	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZMIZ1	ENSG00000108175	2937	PPIF	ENSG00000108179	25451	chr10:79321111-79321677	chr10:79321028-79321055,chr10:79321394-79321405,chr10:79321409-79321437,chr10:79321443-79321466,chr10:79321473-79321487,chr10:79320792-79320815,chr10:79320872-79320896,chr10:79320971-79320981,chr10:79321127-79321140,chr10:79321220-79321237,chr10:79321269-79321280
HUERSP2_10q22.3	HERV	HUERSP2	internal	chr10	79603804	79604152	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SFTPA1	ENSG00000122852	6787	SFTPA3P	ENSG00000225827	8144	None	None
ERVLB4_10q22.3a	HERV	ERVLB4	oneside	chr10	79636240	79637627	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL132656.2	ENSG00000244733	23264	LINC02679	ENSG00000226676	4052	None	None
ERV316A3_10q22.3d	HERV	ERV316A3	oneside	chr10	79754822	79756129	-	noncoding	NUTM2B-AS1	lncRNA	SENSE	ENSG00000225484	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_10q22.3b	HERV	HERVH	internal	chr10	79963908	79965544	+	noncoding	SFTPD	protein_coding	ANTISENSE	ENSG00000133661	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_10q22.3b	HERV	ERVLB4	prototype	chr10	80019187	80020843	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356095.1	ENSG00000229616	1276	C1DP3	ENSG00000224760	3894	None	None
ERVLB4_10q22.3c	HERV	ERVLB4	prototype	chr10	80035382	80037084	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C1DP2	ENSG00000236217	2989	C1DP4	ENSG00000227515	3537	None	None
MER4B_10q22.3	HERV	MER4B	prototype	chr10	80062283	80073050	-	noncoding	TMEM254-AS1	lncRNA	SENSE	ENSG00000230091	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_10q22.3	HERV	LTR57	internal	chr10	80069101	80070478	-	noncoding	TMEM254-AS1	lncRNA	SENSE	ENSG00000230091	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_10q22.3	HERV	MER4	internal	chr10	80069336	80070878	-	noncoding	TMEM254-AS1	lncRNA	SENSE	ENSG00000230091	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_10q22.3	HERV	HML1	oneside	chr10	80105622	80109090	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM254	ENSG00000133678	13065	RPL22P18	ENSG00000230171	16851	None	None
HERVI_10q23.1	HERV	HERVI	prototype	chr10	80738638	80748037	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS7P9	ENSG00000233353	21570	AC027673.1	ENSG00000233703	1595	None	None
HUERSP1_10q23.1a	HERV	HUERSP1	oneside	chr10	80949111	80951151	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPA2P2	ENSG00000226466	185389	WARS2P1	ENSG00000227209	7910	None	None
MER61_10q23.1	HERV	MER61	prototype	chr10	80952403	80955739	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPA2P2	ENSG00000226466	180801	WARS2P1	ENSG00000227209	11202	None	None
ERVLB4_10q23.1a	HERV	ERVLB4	internal	chr10	80970252	80971746	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPA2P2	ENSG00000226466	164794	WARS2P1	ENSG00000227209	29051	None	None
ERVLE_10q23.1a	HERV	ERVLE	internal	chr10	81063277	81066196	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPA2P2	ENSG00000226466	70344	WARS2P1	ENSG00000227209	122076	None	None
MER4B_10q23.1a	HERV	MER4B	prototype	chr10	81191959	81197546	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPA2P2	ENSG00000226466	54624	AL096706.1	ENSG00000287358	673232	None	None
HERVL_10q23.1a	HERV	HERVL	oneside	chr10	81204013	81205218	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPA2P2	ENSG00000226466	66678	AL096706.1	ENSG00000287358	665560	None	None
ERVLB4_10q23.1b	HERV	ERVLB4	internal	chr10	81205214	81207162	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPA2P2	ENSG00000226466	67879	AL096706.1	ENSG00000287358	663616	None	None
PABLB_10q23.1	HERV	PABLB	internal	chr10	81527951	81528681	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPA2P2	ENSG00000226466	390616	AL096706.1	ENSG00000287358	342097	None	None
PRIMA41_10q23.1	HERV	PRIMA41	internal	chr10	81528685	81530338	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPA2P2	ENSG00000226466	391350	AL096706.1	ENSG00000287358	340440	None	None
HERVH_10q23.1	HERV	HERVH	prototype	chr10	83057508	83063365	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NRG3	ENSG00000185737	70329	RNU6-478P	ENSG00000200774	4597	chr10:83062865-83063260	None
ERV316A3_10q23.1a	HERV	ERV316A3	oneside	chr10	83176955	83180068	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-478P	ENSG00000200774	108884	MARK2P15	ENSG00000234931	131560	None	None
MER101_10q23.1a	HERV	MER101	internal	chr10	83437679	83439615	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MARK2P15	ENSG00000234931	123204	LINC02650	ENSG00000233945	232791	None	None
ERVLE_10q23.1b	HERV	ERVLE	internal	chr10	83644255	83646816	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02650	ENSG00000233945	25590	MARK2P15	ENSG00000234931	329780	None	None
MER4B_10q23.1b	HERV	MER4B	internal	chr10	83758994	83761173	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-129P	ENSG00000212324	3185	AC069540.1	ENSG00000223565	22501	None	None
ERVLE_10q23.1c	HERV	ERVLE	internal	chr10	83778434	83780024	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390786.1	ENSG00000233258	131630	RNU6-129P	ENSG00000212324	13970	None	None
ERVLE_10q23.1d	HERV	ERVLE	internal	chr10	83803878	83805657	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-129P	ENSG00000212324	39414	AL390786.1	ENSG00000233258	105997	None	None
HERVL_10q23.1b	HERV	HERVL	prototype	chr10	83971193	83977779	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-65P	ENSG00000200789	25553	AL390786.1	ENSG00000233258	58271	None	None
HERVEA_10q23.1	HERV	HERVEA	prototype	chr10	84108445	84117193	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN2P8	ENSG00000212769	26450	AL603756.1	ENSG00000271933	21227	None	None
HERVIP10FH_10q23.1	HERV	HERVIP10FH	prototype	chr10	84118548	84126791	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL603756.1	ENSG00000271933	11629	HMGN2P8	ENSG00000212769	36553	chr10:84118673-84118891	None
ERVLE_10q23.1e	HERV	ERVLE	internal	chr10	84132243	84132911	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN2P8	ENSG00000212769	50248	AL603756.1	ENSG00000271933	5509	None	None
HARLEQUIN_10q23.1	HERV	HARLEQUIN	prototype	chr10	84167186	84172465	-	noncoding	CERNA2	lncRNA	SENSE	ENSG00000285972	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr10:84171804-84171821,chr10:84171825-84171844,chr10:84172012-84172029,chr10:84172090-84172111
HERVL_10q23.1c	HERV	HERVL	oneside	chr10	84322907	84325017	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00858	ENSG00000229404	28248	CCSER2	ENSG00000107771	3569	None	None
HERVW_10q23.1	HERV	HERVW	prototype	chr10	84525371	84531069	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS3AP5	ENSG00000178429	29374	CCSER2	ENSG00000107771	6850	None	None
ERV316A3_10q23.1b	HERV	ERV316A3	internal	chr10	84723871	84724930	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS3AP5	ENSG00000178429	162608	AL358787.2	ENSG00000288218	431400	None	None
HUERSP1_10q23.1b	HERV	HUERSP1	prototype	chr10	84806901	84813575	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358787.2	ENSG00000288218	342755	RPS3AP5	ENSG00000178429	245638	None	None
HERVL_10q23.1d	HERV	HERVL	oneside	chr10	84881635	84885694	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358787.2	ENSG00000288218	270636	RPS3AP5	ENSG00000178429	320372	None	None
LTR57_10q23.1	HERV	LTR57	internal	chr10	85025297	85026618	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS3AP5	ENSG00000178429	464034	AL358787.2	ENSG00000288218	129712	None	None
HERVL_10q23.1e	HERV	HERVL	prototype	chr10	85029711	85036265	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS3AP5	ENSG00000178429	468448	AL358787.2	ENSG00000288218	120065	None	None
MER41_10q23.1	HERV	MER41	prototype	chr10	85184306	85190827	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01519	ENSG00000237267	2594	AL358787.2	ENSG00000288218	26958	None	None
ERVLE_10q23.1f	HERV	ERVLE	internal	chr10	85461704	85462485	-	noncoding	LINC01520	lncRNA	ANTISENSE	ENSG00000230962	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10q23.1g	HERV	ERVLE	internal	chr10	85510511	85511904	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01520	ENSG00000230962	18510	AL731532.1	ENSG00000279910	14976	None	None
MER101_10q23.1b	HERV	MER101	internal	chr10	85534390	85536387	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-325P	ENSG00000223064	992	AL731532.1	ENSG00000279910	3275	None	None
ERVLE_10q23.1h	HERV	ERVLE	internal	chr10	86011630	86014581	+	noncoding	GRID1	protein_coding	ANTISENSE	ENSG00000182771	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_10q23.1	HERV	HUERSP3B	oneside	chr10	86029348	86031163	+	noncoding	GRID1	protein_coding	ANTISENSE	ENSG00000182771	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_10q23.1c	HERV	ERVLB4	oneside	chr10	86096451	86097617	+	noncoding	GRID1	protein_coding	ANTISENSE	ENSG00000182771	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_10q23.2a	HERV	HERVH	prototype	chr10	86561238	86566658	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7AP8	ENSG00000230507	64167	AL731569.1	ENSG00000227896	36137	None	None
HERVH_10q23.2b	HERV	HERVH	oneside	chr10	86864087	86865600	+	noncoding	BMPR1A	protein_coding	SENSE	ENSG00000107779	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_10q23.2	HERV	MER4	oneside	chr10	87031711	87033478	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-529P	ENSG00000200253	7760	AL136982.5	ENSG00000271573	4234	None	None
ERV316A3_10q23.2a	HERV	ERV316A3	oneside	chr10	87276938	87278337	-	noncoding	NUTM2A-AS1	lncRNA	SENSE	ENSG00000223482	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10q23.2b	HERV	ERV316A3	oneside	chr10	87459637	87460944	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM245A	ENSG00000228055	24602	AL355334.2	ENSG00000286445	39393	None	None
HERVL_10q23.2	HERV	HERVL	prototype	chr10	87634539	87641235	-	noncoding	AL138767.3,AL138767.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000225913,ENSG00000196566	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_10q23.31a	HERV	MER4	prototype	chr10	87796235	87803793	+	noncoding	ATAD1	protein_coding	ANTISENSE	ENSG00000138138	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10q23.31a	HERV	ERV316A3	oneside	chr10	88452348	88453612	+	noncoding	RNLS	protein_coding	ANTISENSE	ENSG00000184719	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10q23.31b	HERV	ERV316A3	oneside	chr10	88592391	88593627	-	noncoding	LIPJ	protein_coding	ANTISENSE	ENSG00000204022	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10q23.31a	HERV	ERVLE	internal	chr10	89270016	89271779	+	noncoding	LIPA	protein_coding	ANTISENSE	ENSG00000107798	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr10:89271021-89271152	None
HERVH_10q23.31a	HERV	HERVH	prototype	chr10	89284720	89290887	+	noncoding	LIPA,IFIT2,AL353751.1	protein_coding,protein_coding,lncRNA	ANTISENSE,SENSE,SENSE	ENSG00000107798,ENSG00000119922,ENSG00000232110	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chr10:89285436-89285805,chr10:89285845-89286174	None
ERVLB4_10q23.31a	HERV	ERVLB4	internal	chr10	89872757	89875690	-	noncoding	LINC01374	lncRNA	ANTISENSE	ENSG00000280560	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_10q23.31b	HERV	HERVH	prototype	chr10	90081018	90086792	-	noncoding	LINC01374,AL139340.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000280560,ENSG00000287150	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_10q23.31b	HERV	MER4	oneside	chr10	90087053	90092706	+	noncoding	LINC01374,AL139340.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000280560,ENSG00000287150	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_10q23.31	HERV	HUERSP3B	prototype	chr10	90135631	90140036	+	noncoding	LINC01374	lncRNA	SENSE	ENSG00000280560	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_10q23.31c	HERV	HERVH	prototype	chr10	90294983	90300722	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01374	ENSG00000280560	69540	LINC02653	ENSG00000236373	101799	None	chr10:90295307-90295310
ERVLE_10q23.31b	HERV	ERVLE	internal	chr10	90336973	90340646	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01374	ENSG00000280560	111530	LINC02653	ENSG00000236373	61875	None	None
MER61_10q23.31	HERV	MER61	oneside	chr10	90412474	90416300	+	noncoding	LINC02653	lncRNA	ANTISENSE	ENSG00000236373	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr10:90413434-90413445
HERVL_10q23.31a	HERV	HERVL	prototype	chr10	90545633	90552063	+	noncoding	LINC02653	lncRNA	ANTISENSE	ENSG00000236373	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_10q23.31b	HERV	HERVL	prototype	chr10	90604944	90611478	-	noncoding	LINC02653	lncRNA	SENSE	ENSG00000236373	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_10q23.31	HERV	ERVL	oneside	chr10	90654709	90658465	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HTR7	ENSG00000148680	82358	LINC02653	ENSG00000236373	25857	None	None
ERVLB4_10q23.31b	HERV	ERVLB4	internal	chr10	90698715	90704136	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HTR7	ENSG00000148680	36687	LINC02653	ENSG00000236373	69863	None	None
MER4B_10q23.31a	HERV	MER4B	internal	chr10	90805247	90807234	+	noncoding	HTR7	protein_coding	ANTISENSE	ENSG00000148680	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_10q23.31d	HERV	HERVH	prototype	chr10	90807289	90813258	+	noncoding	HTR7	protein_coding	ANTISENSE	ENSG00000148680	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr10:90807634-90807650
MER4B_10q23.31b	HERV	MER4B	internal	chr10	90814624	90817142	+	noncoding	HTR7	protein_coding	ANTISENSE	ENSG00000148680	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_10q23.31c	HERV	ERVLB4	internal	chr10	90956946	90961117	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL365434.1	ENSG00000225519	33503	RNU6-740P	ENSG00000201604	34111	None	None
ERV316A3_10q23.31c	HERV	ERV316A3	oneside	chr10	91099693	91102310	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00502	ENSG00000224851	37529	NUDT9P1	ENSG00000234043	50295	None	None
HERVH_10q23.32	HERV	HERVH	prototype	chr10	91301350	91307329	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HECTD2	ENSG00000165338	101951	PCGF5	ENSG00000180628	17013	None	None
ERVLB4_10q23.33a	HERV	ERVLB4	internal	chr10	92410802	92411764	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MARK2P9	ENSG00000232709	6903	MARCHF5	ENSG00000198060	56838	None	None
HERVL_10q23.33a	HERV	HERVL	prototype	chr10	93228904	93235749	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL17P34	ENSG00000213432	48255	XRCC6P1	ENSG00000237417	19277	None	None
HARLEQUIN_10q23.33	HERV	HARLEQUIN	prototype	chr10	94384486	94392604	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NOC3L	ENSG00000173145	21527	TBC1D12	ENSG00000108239	9937	None	None
ERVLB4_10q23.33b	HERV	ERVLB4	internal	chr10	94479974	94480644	-	noncoding	TBC1D12	protein_coding	ANTISENSE	ENSG00000108239	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_10q23.33b	HERV	HERVL	oneside	chr10	94650532	94655169	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTBP2P2	ENSG00000235746	2536	CYP2C18	ENSG00000108242	28560	None	None
ERVLB4_10q23.33c	HERV	ERVLB4	prototype	chr10	94666525	94672542	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYP2C18	ENSG00000108242	11187	CTBP2P2	ENSG00000235746	18529	None	None
HERVL74_10q23.33	HERV	HERVL74	oneside	chr10	94673087	94675530	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTBP2P2	ENSG00000235746	25091	CYP2C18	ENSG00000108242	8199	None	None
HERV9_10q23.33	HERV	HERV9	prototype	chr10	94763774	94774155	-	noncoding	AL583836.1,CYP2C19	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000276490,ENSG00000165841	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVW_10q23.33	HERV	HERVW	prototype	chr10	94834569	94841534	-	noncoding	AL583836.1,CYP2C19	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000276490,ENSG00000165841	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_10q23.33	HERV	MER4	oneside	chr10	94924812	94928197	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYP2C9	ENSG00000138109	10461	RPL7AP52	ENSG00000225354	41469	None	None
HERVIP10FH_10q23.33	HERV	HERVIP10FH	prototype	chr10	94991380	94998809	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYP2C59P	ENSG00000228460	8317	CYP2C9	ENSG00000138109	1289	None	None
HUERSP3_10q23.33a	HERV	HUERSP3	internal	chr10	95123975	95127447	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL157834.4	ENSG00000288526	14478	AL157834.1	ENSG00000231829	12333	None	None
HUERSP3_10q23.33b	HERV	HUERSP3	internal	chr10	95127496	95131937	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL157834.4	ENSG00000288526	9988	AL157834.1	ENSG00000231829	15854	None	None
HUERSP3_10q23.33c	HERV	HUERSP3	oneside	chr10	95132811	95134563	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL157834.4	ENSG00000288526	7362	AL157834.1	ENSG00000231829	21169	None	None
MER101_10q23.33	HERV	MER101	internal	chr10	95181009	95183369	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL157834.3	ENSG00000274691	7822	PAWRP1	ENSG00000225533	284	None	None
ERV316A3_10q23.33	HERV	ERV316A3	internal	chr10	95232500	95234121	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PDLIM1	ENSG00000107438	3451	AL157834.2	ENSG00000234026	1356	None	None
HERVW_10q24.1	HERV	HERVW	prototype	chr10	95717359	95724870	-	noncoding	ENTPD1	protein_coding	ANTISENSE	ENSG00000138185	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_10q24.1	HERV	HERVH	prototype	chr10	96733005	96736618	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PIK3AP1	ENSG00000155629	12491	RNU6-1274P	ENSG00000207287	6549	None	None
HARLEQUIN_10q24.2	HERV	HARLEQUIN	prototype	chr10	97555464	97561807	-	coding	UBTD1	protein_coding	ANTISENSE	ENSG00000165886	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_10q24.2a	HERV	HERVH	oneside	chr10	97562298	97564296	-	noncoding	UBTD1	protein_coding	ANTISENSE	ENSG00000165886	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10q24.2	HERV	ERVLE	internal	chr10	97695971	97699483	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AVPI1	ENSG00000119986	8730	MARVELD1	ENSG00000155254	13690	None	None
ERV316A3_10q24.2	HERV	ERV316A3	oneside	chr10	98770367	98772672	+	noncoding	HPSE2	protein_coding	ANTISENSE	ENSG00000172987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_10q24.2b	HERV	HERVH	prototype	chr10	99260264	99265383	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HPSE2	ENSG00000172987	24402	CNNM1	ENSG00000119946	63973	None	None
HML2_10q24.2	HERV	HML2	prototype	chr10	99820812	99827988	-	coding	ABCC2	protein_coding	ANTISENSE	ENSG00000023839	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_10q24.2	HERV	MER4	oneside	chr10	100033668	100035779	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DNMBP	ENSG00000107554	23721	CPN1	ENSG00000120054	6414	None	None
HERVH_10q24.31a	HERV	HERVH	prototype	chr10	100380920	100388398	+	noncoding	OLMALINC	lncRNA	SENSE	ENSG00000235823	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVL_10q24.31	HERV	ERVL	internal	chr10	101148059	101151766	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01514	ENSG00000237579	24540	TLX1	ENSG00000107807	10270	None	None
HERVH_10q24.31b	HERV	HERVH	oneside	chr10	101183756	101188921	-	noncoding	LINC01514	lncRNA	ANTISENSE	ENSG00000237579	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_10q24.32	HERV	MER4	internal	chr10	102180852	102181932	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOVL3	ENSG00000119915	44367	NOLC1	ENSG00000166197	16981	None	None
HERVP71A_10q24.32	HERV	HERVP71A	prototype	chr10	102193133	102204851	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ELOVL3	ENSG00000119915	21448	NOLC1	ENSG00000166197	29262	None	chr10:102193241-102193246
HERVK11_10q24.32	HERV	HERVK11	prototype	chr10	102838109	102845149	-	coding	PFN1P11	processed_pseudogene	SENSE	ENSG00000213061	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4B_10q24.32	HERV	MER4B	oneside	chr10	102891360	102895059	+	noncoding	BORCS7-ASMT,AS3MT	protein_coding,protein_coding	SENSE,SENSE	ENSG00000270316,ENSG00000214435	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_10q24.33a	HERV	HERVH	prototype	chr10	103205441	103213657	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NT5C2	ENSG00000076685	12135	ST13P13	ENSG00000229256	2052	None	None
HERVH_10q24.33b	HERV	HERVH	prototype	chr10	103520207	103522264	-	noncoding	NEURL1	protein_coding	ANTISENSE	ENSG00000107954	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_10q24.33	HERV	MER41	prototype	chr10	103526942	103530067	-	noncoding	NEURL1	protein_coding	ANTISENSE	ENSG00000107954	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_10q25.1	HERV	HERVP71A	prototype	chr10	104065881	104070395	+	noncoding	COL17A1	protein_coding	ANTISENSE	ENSG00000065618	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_10q25.1	HERV	LTR19	internal	chr10	104233864	104236373	+	noncoding	GSTO1	protein_coding	SENSE	ENSG00000148834	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_10q25.1a	HERV	HERVL	oneside	chr10	104462191	104468144	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CFAP58	ENSG00000120051	7089	LINC02620	ENSG00000225768	6795	None	None
MER61_10q25.1	HERV	MER61	prototype	chr10	104608119	104613187	+	noncoding	AL161646.1	lncRNA	SENSE	ENSG00000237761	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10q25.1a	HERV	ERVLE	internal	chr10	104831935	104833620	-	noncoding	SORCS3	protein_coding	ANTISENSE	ENSG00000156395	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_10q25.1b	HERV	HERVL	oneside	chr10	105421731	105427856	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-463P	ENSG00000207068	106803	SORCS3	ENSG00000156395	156489	None	None
ERV316A3_10q25.1a	HERV	ERV316A3	internal	chr10	105445484	105452638	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-463P	ENSG00000207068	82021	SORCS3	ENSG00000156395	180242	None	None
ERV316A3_10q25.1b	HERV	ERV316A3	internal	chr10	105453090	105453940	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-463P	ENSG00000207068	80719	SORCS3	ENSG00000156395	187848	None	None
HERVH_10q25.1a	HERV	HERVH	prototype	chr10	105727637	105733785	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	YWHAZP5	ENSG00000213260	40586	LINC02627	ENSG00000229466	74440	None	None
ERV316A3_10q25.1c	HERV	ERV316A3	internal	chr10	105741925	105742616	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02627	ENSG00000229466	65609	YWHAZP5	ENSG00000213260	54874	None	None
ERVL_10q25.1	HERV	ERVL	internal	chr10	105752866	105753998	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02627	ENSG00000229466	54227	YWHAZP5	ENSG00000213260	65815	None	None
ERV316A3_10q25.1d	HERV	ERV316A3	oneside	chr10	105956153	105960928	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589166.1	ENSG00000286609	24751	AL731574.1	ENSG00000287732	51382	None	None
HERVH_10q25.1b	HERV	HERVH	prototype	chr10	106016740	106023098	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02624	ENSG00000229775	117045	AL589166.1	ENSG00000286609	29013	None	None
ERVLE_10q25.1b	HERV	ERVLE	internal	chr10	106105086	106107561	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589166.1	ENSG00000286609	117359	LINC02624	ENSG00000229775	32582	None	None
ERV316A3_10q25.1e	HERV	ERV316A3	prototype	chr10	106209125	106211349	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL23AP59	ENSG00000215002	338757	LINC02624	ENSG00000229775	20403	None	None
MER4_10q25.1a	HERV	MER4	internal	chr10	106375402	106379554	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02624	ENSG00000229775	186680	RPL23AP59	ENSG00000215002	170552	None	None
ERVLE_10q25.1c	HERV	ERVLE	internal	chr10	107195348	107199051	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SORCS1	ENSG00000108018	30814	RNA5SP326	ENSG00000200079	262509	None	None
ERV316A3_10q25.1f	HERV	ERV316A3	prototype	chr10	107232848	107238059	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SORCS1	ENSG00000108018	68314	RNA5SP326	ENSG00000200079	223501	None	None
ERV316A3_10q25.1g	HERV	ERV316A3	oneside	chr10	107358158	107363824	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SORCS1	ENSG00000108018	193624	RNA5SP326	ENSG00000200079	97736	None	None
ERVLB4_10q25.1a	HERV	ERVLB4	internal	chr10	107363902	107367520	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SORCS1	ENSG00000108018	199368	RNA5SP326	ENSG00000200079	94040	None	None
ERVLB4_10q25.1b	HERV	ERVLB4	prototype	chr10	107375174	107381044	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP326	ENSG00000200079	80516	SORCS1	ENSG00000108018	210640	None	None
ERV316A3_10q25.1h	HERV	ERV316A3	oneside	chr10	107641290	107646018	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01435	ENSG00000229981	48955	RNA5SP326	ENSG00000200079	179621	None	None
HERVL_10q25.1c	HERV	HERVL	prototype	chr10	107660467	107664583	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP326	ENSG00000200079	198798	LINC01435	ENSG00000229981	30390	None	None
MER34B_10q25.1	HERV	MER34B	internal	chr10	107873192	107876026	+	noncoding	LINC01435	lncRNA	ANTISENSE	ENSG00000229981	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10q25.1d	HERV	ERVLE	internal	chr10	108104715	108107247	+	noncoding	LINC01435	lncRNA	ANTISENSE	ENSG00000229981	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10q25.1i	HERV	ERV316A3	oneside	chr10	108136396	108137531	-	noncoding	LINC01435	lncRNA	SENSE	ENSG00000229981	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10q25.1j	HERV	ERV316A3	internal	chr10	108231264	108234185	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTGES3P5	ENSG00000234544	61914	LINC01435	ENSG00000229981	33415	None	None
MER41_10q25.1	HERV	MER41	internal	chr10	108244290	108250025	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01435	ENSG00000229981	46441	PTGES3P5	ENSG00000234544	46074	None	None
ERVLE_10q25.1e	HERV	ERVLE	oneside	chr10	108401882	108403768	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTGES3P5	ENSG00000234544	105350	AL353740.1	ENSG00000203434	144207	None	None
HERVL_10q25.1d	HERV	HERVL	prototype	chr10	108429636	108433037	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353740.1	ENSG00000203434	114938	PTGES3P5	ENSG00000234544	133104	None	None
HERVH_10q25.1c	HERV	HERVH	prototype	chr10	108599050	108600816	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353740.1	ENSG00000203434	37235	LINC02661	ENSG00000223381	107723	chr10:108600337-108600711	chr10:108599575-108599595
ERV316A3_10q25.1k	HERV	ERV316A3	oneside	chr10	108639130	108641909	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353740.1	ENSG00000203434	77315	LINC02661	ENSG00000223381	66630	None	None
HML1_10q25.1	HERV	HML1	internal	chr10	108730536	108732597	+	noncoding	LINC02661	lncRNA	SENSE	ENSG00000223381	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_10q25.1	HERV	HUERSP3	prototype	chr10	108782691	108787919	+	noncoding	LINC02661	lncRNA	SENSE	ENSG00000223381	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_10q25.1a	HERV	HERVL74	internal	chr10	108823020	108823767	-	noncoding	LINC02661	lncRNA	ANTISENSE	ENSG00000223381	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_10q25.1e	HERV	HERVL	oneside	chr10	108889287	108893944	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP278	ENSG00000222436	47025	MAPKAPK5P1	ENSG00000224498	39726	None	None
HERVL_10q25.1f	HERV	HERVL	oneside	chr10	109311963	109314771	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PHB2P1	ENSG00000232728	213348	RNU6-839P	ENSG00000200217	72217	None	None
HERVL74_10q25.1b	HERV	HERVL74	internal	chr10	109325732	109326543	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-839P	ENSG00000200217	85986	PHB2P1	ENSG00000232728	201576	None	None
HERVH_10q25.1d	HERV	HERVH	prototype	chr10	109562758	109568252	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BTF3P15	ENSG00000237242	27768	AL390123.1	ENSG00000270333	93562	None	None
MER4_10q25.1b	HERV	MER4	oneside	chr10	109632462	109637707	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BTF3P15	ENSG00000237242	97472	AL390123.1	ENSG00000270333	24107	None	None
ERV316A3_10q25.2a	HERV	ERV316A3	internal	chr10	110632830	110633773	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359260.1	ENSG00000223302	8905	SMC3	ENSG00000108055	28194	None	None
ERVLB4_10q25.2a	HERV	ERVLB4	oneside	chr10	111579104	111583925	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136119.1	ENSG00000287231	203308	RPS6P15	ENSG00000230809	80163	None	None
ERVLB4_10q25.2b	HERV	ERVLB4	oneside	chr10	111589997	111592726	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136119.1	ENSG00000287231	194507	RPS6P15	ENSG00000230809	91056	None	None
ERV316A3_10q25.2b	HERV	ERV316A3	oneside	chr10	111634423	111635608	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS6P15	ENSG00000230809	135482	AL136119.1	ENSG00000287231	151625	None	None
HERVL_10q25.2a	HERV	HERVL	oneside	chr10	111668162	111670989	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136119.1	ENSG00000287231	116244	RPS6P15	ENSG00000230809	169221	None	None
HERVL_10q25.2b	HERV	HERVL	oneside	chr10	111675067	111677213	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS6P15	ENSG00000230809	176126	AL136119.1	ENSG00000287231	110020	None	None
ERVLE_10q25.3a	HERV	ERVLE	internal	chr10	114802955	114807340	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137025.1	ENSG00000228484	8611	TAF9BP2	ENSG00000215760	2035	None	None
ERVLE_10q25.3b	HERV	ERVLE	internal	chr10	114871646	114872569	-	noncoding	FAM160B1	protein_coding	ANTISENSE	ENSG00000151553	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10q25.3a	HERV	ERV316A3	internal	chr10	114889429	114889986	-	noncoding	FAM160B1	protein_coding	ANTISENSE	ENSG00000151553	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10q25.3c	HERV	ERVLE	internal	chr10	114895996	114898125	+	noncoding	FAM160B1	protein_coding	SENSE	ENSG00000151553	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10q25.3b	HERV	ERV316A3	oneside	chr10	115249999	115253510	-	noncoding	ATRNL1	protein_coding	ANTISENSE	ENSG00000107518	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_10q25.3	HERV	ERVLB4	oneside	chr10	115270450	115276044	-	noncoding	ATRNL1	protein_coding	ANTISENSE	ENSG00000107518	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_10q25.3a	HERV	MER4	oneside	chr10	115499414	115501844	-	noncoding	ATRNL1	protein_coding	ANTISENSE	ENSG00000107518	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_10q25.3b	HERV	MER4	internal	chr10	115501933	115504223	-	noncoding	ATRNL1	protein_coding	ANTISENSE	ENSG00000107518	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_10q25.3c	HERV	MER4	oneside	chr10	115504450	115507335	-	noncoding	ATRNL1	protein_coding	ANTISENSE	ENSG00000107518	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10q25.3c	HERV	ERV316A3	oneside	chr10	115524486	115527116	-	noncoding	ATRNL1	protein_coding	ANTISENSE	ENSG00000107518	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_10q25.3	HERV	LTR57	internal	chr10	115619677	115621218	-	noncoding	ATRNL1	protein_coding	ANTISENSE	ENSG00000107518	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_10q25.3	HERV	HERVH	prototype	chr10	116480675	116486518	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PNLIPRP3	ENSG00000203837	2718	RNU6-1090P	ENSG00000200935	51665	None	None
MER34B_10q25.3a	HERV	MER34B	oneside	chr10	116989409	116992707	+	noncoding	SHTN1	protein_coding	ANTISENSE	ENSG00000187164	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_10q25.3b	HERV	MER34B	oneside	chr10	116992719	116997446	+	noncoding	SHTN1	protein_coding	ANTISENSE	ENSG00000187164	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr10:116995734-116995899	None
ERV316A3_10q25.3d	HERV	ERV316A3	internal	chr10	117194187	117195134	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3663HG	ENSG00000234474	25079	RPL12P26	ENSG00000236171	1034	None	None
HML3_10q26.11	HERV	HML3	internal	chr10	118612442	118614732	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TOMM22P5	ENSG00000225155	29028	PRLHR	ENSG00000119973	16794	None	None
ERVLE_10q26.11a	HERV	ERVLE	internal	chr10	118749092	118750710	+	noncoding	CACUL1	protein_coding	ANTISENSE	ENSG00000151893	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_10q26.11	HERV	HERVH	oneside	chr10	118893657	118900344	+	coding	AL157388.1	lncRNA	ANTISENSE	ENSG00000229272	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10q26.11b	HERV	ERVLE	internal	chr10	118998164	119000000	+	noncoding	AL157388.1	lncRNA	ANTISENSE	ENSG00000229272	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10q26.12	HERV	ERVLE	oneside	chr10	120293118	120294639	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355298.1	ENSG00000223455	222959	RPL21P16	ENSG00000220842	60062	None	None
ERVL_10q26.12	HERV	ERVL	internal	chr10	120832824	120833238	+	noncoding	WDR11-AS1	lncRNA	ANTISENSE	ENSG00000227165	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_10q26.12	HERV	HERVH	prototype	chr10	120844932	120850561	+	noncoding	WDR11-AS1,AL391425.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000227165,ENSG00000287936	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER61_10q26.12	HERV	MER61	internal	chr10	120989541	120996023	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010998.3	ENSG00000278484	3945	RPL19P16	ENSG00000236762	137067	None	None
ERV316A3_10q26.12	HERV	ERV316A3	prototype	chr10	121060523	121062902	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010998.3	ENSG00000278484	74927	RPL19P16	ENSG00000236762	70188	None	None
MER4B_10q26.13	HERV	MER4B	internal	chr10	122666381	122667249	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL603764.2	ENSG00000286135	5601	AL603764.1	ENSG00000286114	2185	None	None
MER4_10q26.13	HERV	MER4	oneside	chr10	122667616	122669659	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL603764.2	ENSG00000286135	3191	AL603764.1	ENSG00000286114	3420	None	None
HERVL_10q26.13a	HERV	HERVL	prototype	chr10	123814109	123820241	+	coding	CPXM2	protein_coding	ANTISENSE	ENSG00000121898	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10q26.13	HERV	ERVLE	internal	chr10	124210024	124211007	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CHST15	ENSG00000182022	116426	OAT	ENSG00000065154	186296	None	None
ERV316A3_10q26.13	HERV	ERV316A3	internal	chr10	125335963	125336987	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPS21P6	ENSG00000214298	169026	RPS27P18	ENSG00000233135	136699	None	None
HERVL_10q26.13b	HERV	HERVL	prototype	chr10	125621520	125623461	-	coding	TEX36	protein_coding	SENSE	ENSG00000175018	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_10q26.2a	HERV	ERVLB4	internal	chr10	127648405	127649505	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL391005.1	ENSG00000279725	85057	NPS	ENSG00000214285	95766	None	None
ERVLB4_10q26.2b	HERV	ERVLB4	internal	chr10	127949338	127956187	+	noncoding	PTPRE	protein_coding	SENSE	ENSG00000132334	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10q26.3a	HERV	ERV316A3	oneside	chr10	128863726	128865215	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390763.1	ENSG00000234640	543512	LINC02667	ENSG00000224190	47595	None	None
ERVLB4_10q26.3a	HERV	ERVLB4	oneside	chr10	129155580	129157786	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355537.2	ENSG00000287361	186840	AL391869.1	ENSG00000225424	120465	None	None
HML3_10q26.3	HERV	HML3	prototype	chr10	130290809	130297789	+	noncoding	LINC02646	lncRNA	SENSE	ENSG00000236303	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_10q26.3a	HERV	ERVLE	internal	chr10	130872631	130879142	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016816.1	ENSG00000285529	335225	MIR378C	ENSG00000264803	83446	None	None
ERVLE_10q26.3b	HERV	ERVLE	internal	chr10	131089724	131091312	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TCERG1L	ENSG00000176769	1079	MIR378C	ENSG00000264803	127056	None	None
ERV316A3_10q26.3b	HERV	ERV316A3	internal	chr10	131421199	131422918	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01164	ENSG00000189275	349480	TCERG1L	ENSG00000176769	109478	None	None
ERVLE_10q26.3c	HERV	ERVLE	internal	chr10	131550938	131551590	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TCERG1L	ENSG00000176769	239217	LINC01164	ENSG00000189275	220808	None	None
ERVLE_10q26.3d	HERV	ERVLE	internal	chr10	132031248	132036125	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL162274.3	ENSG00000279982	31402	JAKMIP3	ENSG00000188385	211	None	None
HERVL_10q26.3a	HERV	HERVL	internal	chr10	132672827	132675060	-	noncoding	INPP5A	protein_coding	ANTISENSE	ENSG00000068383	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_10q26.3b	HERV	HERVL	prototype	chr10	133495747	133502939	-	noncoding	SCART1	protein_coding	ANTISENSE	ENSG00000214279	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL74_10q26.3	HERV	HERVL74	internal	chr10	133544234	133545757	-	noncoding	CYP2E1	protein_coding	ANTISENSE	ENSG00000130649	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_10q26.3b	HERV	ERVLB4	internal	chr10	133552152	133552825	+	noncoding	CYP2E1	protein_coding	SENSE	ENSG00000130649	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_10q26.3	HERV	MER4	oneside	chr10	133560793	133562261	+	noncoding	CYP2E1,SYCE1	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000130649,ENSG00000171772	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML1_10q26.3	HERV	HML1	oneside	chr10	133603540	133608205	+	noncoding	AL731769.2	lncRNA	SENSE	ENSG00000288107	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVK14C_10q26.3	HERV	HERVK14C	internal	chr10	133608443	133609346	+	noncoding	AL731769.2	lncRNA	SENSE	ENSG00000288107	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV3_11p15.5	HERV	HERV3	oneside	chr11	322542	324821	-	noncoding	AC136475.1,IFITM3,AC136475.8	lncRNA,protein_coding,lncRNA	ANTISENSE,SENSE,SENSE	ENSG00000251661,ENSG00000142089,ENSG00000270105	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER34B_11p15.5	HERV	MER34B	unknown	chr11	339634	342458	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	B4GALNT4	ENSG00000182272	27041	AC136475.9	ENSG00000270972	5946	chr11:341474-341670	None
MER41_11p15.5a	HERV	MER41	internal	chr11	347589	349098	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC136475.9	ENSG00000270972	13901	B4GALNT4	ENSG00000182272	20401	None	None
MER41_11p15.5b	HERV	MER41	oneside	chr11	349106	352592	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	B4GALNT4	ENSG00000182272	16907	AC136475.9	ENSG00000270972	15418	chr11:350841-351091	None
ERVLE_11p15.5a	HERV	ERVLE	internal	chr11	359363	366821	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC136475.9	ENSG00000270972	25675	B4GALNT4	ENSG00000182272	2678	chr11:364568-364678	None
ERVLB4_11p15.5a	HERV	ERVLB4	internal	chr11	1059426	1060042	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02688	ENSG00000254872	3677	MUC2	ENSG00000198788	14833	None	None
ERVLE_11p15.5b	HERV	ERVLE	internal	chr11	1360002	1364808	-	noncoding	LINC02689	lncRNA	ANTISENSE	ENSG00000285985	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11p15.5a	HERV	ERV316A3	oneside	chr11	1714575	1715748	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IFITM10	ENSG00000244242	16658	KRTAP5-6	ENSG00000205864	16820	None	None
ERV316A3_11p15.5b	HERV	ERV316A3	oneside	chr11	2072427	2073468	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC132217.2	ENSG00000284779	55644	H19	ENSG00000130600	70957	None	None
ERVLB4_11p15.5b	HERV	ERVLB4	internal	chr11	2221298	2221987	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4686	ENSG00000265258	48160	ASCL2	ENSG00000183734	46508	None	None
ERVL_11p15.5	HERV	ERVL	oneside	chr11	2232877	2238198	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4686	ENSG00000265258	59739	ASCL2	ENSG00000183734	30297	None	None
ERVLB4_11p15.5c	HERV	ERVLB4	internal	chr11	2292785	2296646	-	noncoding	C11orf21	protein_coding	SENSE	ENSG00000110665	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr11:2293682-2293698
ERVLB4_11p15.5d	HERV	ERVLB4	internal	chr11	2324940	2326799	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-878P	ENSG00000207308	3113	CD81-AS1	ENSG00000238184	1950	None	None
HERVIP10FH_11p15.5	HERV	HERVIP10FH	unknown	chr11	2335785	2342573	+	noncoding	CD81-AS1,RPL26P30	lncRNA,transcribed_processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000238184,ENSG00000236264	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr11:2336130-2336135,chr11:2335773-2335790
ERVLB4_11p15.5e	HERV	ERVLB4	prototype	chr11	2354004	2362091	+	noncoding	CD81-AS1	lncRNA	ANTISENSE	ENSG00000238184	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_11p15.4a	HERV	MER4	prototype	chr11	3110563	3118570	+	noncoding	OSBPL5	protein_coding	ANTISENSE	ENSG00000021762	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_11p15.4	HERV	MER4B	unknown	chr11	3237153	3246909	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFA5P8	ENSG00000236987	29136	AC109309.1	ENSG00000224513	4315	None	None
HERVFH21_11p15.4	HERV	HERVFH21	prototype	chr11	3352177	3358320	-	coding	ZNF195	protein_coding	SENSE	ENSG00000005801	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HML2_11p15.4a	HERV	HML2	prototype	chr11	3447426	3456979	-	coding	AC127526.3	transcribed_unprocessed_pseudogene	SENSE	ENSG00000284605	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_11p15.4a	HERV	HERVH	oneside	chr11	3470257	3473528	-	noncoding	AC127526.3,AC127526.1	transcribed_unprocessed_pseudogene,lncRNA	SENSE,ANTISENSE	ENSG00000284605,ENSG00000254757	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_11p15.4	HERV	HERVE	oneside	chr11	3473529	3481711	-	coding	AC127526.3,AC127526.1,AC127526.5,AC127526.2	transcribed_unprocessed_pseudogene,lncRNA,lncRNA,lncRNA	SENSE,ANTISENSE,SENSE,SENSE	ENSG00000284605,ENSG00000254757,ENSG00000287906,ENSG00000255367	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr11:3477038-3477079
HERVH_11p15.4b	HERV	HERVH	oneside	chr11	3481712	3485187	-	noncoding	AC127526.3,AC127526.1,AC127526.2	transcribed_unprocessed_pseudogene,lncRNA,lncRNA	SENSE,ANTISENSE,SENSE	ENSG00000284605,ENSG00000254757,ENSG00000255367	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVS71_11p15.4	HERV	HERVS71	prototype	chr11	3509348	3516789	-	coding	AC127526.1,AC127526.2,AC127526.4	lncRNA,lncRNA,lncRNA	ANTISENSE,SENSE,ANTISENSE	ENSG00000254757,ENSG00000255367,ENSG00000287312	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr11:3512170-3512349	None
ERVLB4_11p15.4a	HERV	ERVLB4	internal	chr11	3582916	3583518	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC127526.2	ENSG00000255367	1705	AP006294.1	ENSG00000230851	7759	None	None
HERVH_11p15.4c	HERV	HERVH	prototype	chr11	3647949	3653636	+	noncoding	ART1	protein_coding	SENSE	ENSG00000129744	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11p15.4a	HERV	ERV316A3	internal	chr11	3920557	3921555	+	noncoding	STIM1	protein_coding	SENSE	ENSG00000167323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_11p15.4b	HERV	ERVLB4	internal	chr11	4141300	4144989	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RRM1	ENSG00000167325	2368	OR55B1P	ENSG00000231548	1123	None	None
HERVH_11p15.4d	HERV	HERVH	prototype	chr11	4219299	4225317	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SSU72P5	ENSG00000284018	7971	AC015689.1	ENSG00000255387	7208	None	None
HERVH_11p15.4e	HERV	HERVH	prototype	chr11	4315702	4321901	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SSU72P3	ENSG00000284546	7964	SSU72P4	ENSG00000283873	27619	None	None
HML2_11p15.4b	HERV	HML2	prototype	chr11	4459435	4461473	-	noncoding	OR52K3P	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000225101	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:4459576-4459775	chr11:4459576-4459579
HML4_11p15.4	HERV	HML4	oneside	chr11	4492741	4497906	-	noncoding	OR52K1	protein_coding	ANTISENSE	ENSG00000196778	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr11:4492887-4493120	None
ERV316A3_11p15.4b	HERV	ERV316A3	internal	chr11	4550034	4550543	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR52M1	ENSG00000197790	3890	C11orf40	ENSG00000171987	20880	None	None
HUERSP2_11p15.4	HERV	HUERSP2	prototype	chr11	4550544	4554796	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR52M1	ENSG00000197790	4400	C11orf40	ENSG00000171987	16627	None	None
ERV316A3_11p15.4c	HERV	ERV316A3	oneside	chr11	4554797	4558978	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR52M1	ENSG00000197790	8653	C11orf40	ENSG00000171987	12445	None	None
ERV316A3_11p15.4d	HERV	ERV316A3	internal	chr11	4570758	4571487	+	noncoding	C11orf40	lncRNA	ANTISENSE	ENSG00000171987	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_11p15.4	HERV	HUERSP3B	prototype	chr11	4622329	4627200	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR51D1	ENSG00000197428	10277	TRIM68	ENSG00000167333	14098	None	None
ERVLE_11p15.4a	HERV	ERVLE	internal	chr11	4823031	4824954	-	noncoding	MMP26	protein_coding	ANTISENSE	ENSG00000167346	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11p15.4e	HERV	ERV316A3	oneside	chr11	4898889	4902088	-	noncoding	MMP26	protein_coding	ANTISENSE	ENSG00000167346	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11p15.4f	HERV	ERV316A3	oneside	chr11	4977183	4978583	-	noncoding	MMP26	protein_coding	ANTISENSE	ENSG00000167346	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_11p15.4f	HERV	HERVH	prototype	chr11	5160297	5166117	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR51A1P	ENSG00000176752	4234	OR52A1	ENSG00000182070	5540	None	None
HERVL74_11p15.4	HERV	HERVL74	internal	chr11	5497961	5499041	+	noncoding	HBG2,AC104389.5,HBE1,OR51B5	protein_coding,protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000196565,ENSG00000239920,ENSG00000213931,ENSG00000167355	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_11p15.4c	HERV	ERVLB4	internal	chr11	5649261	5651245	-	noncoding	AC104389.5	protein_coding	SENSE	ENSG00000239920	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11p15.4g	HERV	ERV316A3	oneside	chr11	5739689	5741904	+	noncoding	TRIM5	protein_coding	ANTISENSE	ENSG00000132256	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVI_11p15.4	HERV	HERVI	oneside	chr11	5808038	5809640	-	noncoding	TRIM5	protein_coding	SENSE	ENSG00000132256	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr11:5809247-5809258
HERVFC2_11p15.4	HERV	HERVFC2	internal	chr11	5928773	5933737	+	coding	TRIM5	protein_coding	ANTISENSE	ENSG00000132256	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:5932540-5932631	None
HERVFC1_11p15.4	HERV	HERVFC1	oneside	chr11	5935248	5938354	+	noncoding	TRIM5	protein_coding	ANTISENSE	ENSG00000132256	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chr11:5937978-5938228	None
HUERSP1_11p15.4a	HERV	HUERSP1	oneside	chr11	6039059	6042072	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR56A1	ENSG00000180934	4721	OR56A7P	ENSG00000255481	3735	None	chr11:6040290-6040309
HERVH_11p15.4g	HERV	HERVH	prototype	chr11	6069822	6075884	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR56B4	ENSG00000180919	31800	OR52X1P	ENSG00000234895	2036	None	None
HERVK11_11p15.4	HERV	HERVK11	oneside	chr11	6076055	6078769	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR52X1P	ENSG00000234895	8269	OR56B4	ENSG00000180919	28915	None	None
MER41_11p15.4a	HERV	MER41	oneside	chr11	6158349	6161309	-	noncoding	AC022762.1	lncRNA	SENSE	ENSG00000254444	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_11p15.4b	HERV	MER41	prototype	chr11	6283647	6288759	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCKBR	ENSG00000110148	11520	AC068733.2	ENSG00000270435	8430	None	None
HERVH_11p15.4h	HERV	HERVH	prototype	chr11	6366028	6371660	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068733.1	ENSG00000254443	761	SMPD1	ENSG00000166311	18780	None	None
ERV316A3_11p15.4h	HERV	ERV316A3	oneside	chr11	6380213	6381299	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068733.1	ENSG00000254443	14946	SMPD1	ENSG00000166311	9141	None	None
HUERSP1_11p15.4b	HERV	HUERSP1	prototype	chr11	6686696	6694293	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091564.1	ENSG00000241678	327	GVINP1	ENSG00000254838	19243	None	None
PABLA_11p15.4	HERV	PABLA	oneside	chr11	6852960	6855713	+	noncoding	AC087280.2	lncRNA	ANTISENSE	ENSG00000283415	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11p15.4b	HERV	ERVLE	internal	chr11	6960741	6961511	-	noncoding	ZNF215	protein_coding	ANTISENSE	ENSG00000149054	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_11p15.4	HERV	HERVL40	oneside	chr11	7063177	7064689	-	noncoding	NLRP14	protein_coding	ANTISENSE	ENSG00000158077	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH48_11p15.4	HERV	HERVH48	prototype	chr11	7516499	7520474	-	noncoding	PPFIBP2	protein_coding	ANTISENSE	ENSG00000166387	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:7516561-7516681	None
LTR57_11p15.4	HERV	LTR57	oneside	chr11	7775454	7776386	+	noncoding	AC044810.3,AC044810.2	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000271758,ENSG00000254951	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMAX_11p15.4	HERV	PRIMAX	internal	chr11	7878076	7878511	-	noncoding	AC044810.3,AC044810.2	lncRNA,lncRNA	SENSE,SENSE	ENSG00000271758,ENSG00000254951	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_11p15.4	HERV	HML6	prototype	chr11	7899325	7906232	-	noncoding	AC044810.2	lncRNA	SENSE	ENSG00000254951	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr11:7906202-7906206,chr11:7905746-7905761
HERVH_11p15.4i	HERV	HERVH	prototype	chr11	7912151	7917907	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR10A6	ENSG00000279000	6685	AC044810.2	ENSG00000254951	6196	None	None
MER4_11p15.4b	HERV	MER4	oneside	chr11	7968458	7971241	-	noncoding	EIF3F	protein_coding	ANTISENSE	ENSG00000175390	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr11:7970026-7970074
ERV316A3_11p15.4i	HERV	ERV316A3	prototype	chr11	8008168	8011854	-	noncoding	CASC23	lncRNA	SENSE	ENSG00000255420	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11p15.4j	HERV	ERV316A3	oneside	chr11	9131718	9134494	+	noncoding	SCUBE2	protein_coding	ANTISENSE	ENSG00000175356	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_11p15.4	HERV	HERVW	oneside	chr11	9347806	9349617	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IPO7	ENSG00000205339	35035	TMEM41B	ENSG00000166471	33170	None	None
ERV316A3_11p15.4k	HERV	ERV316A3	oneside	chr11	9769072	9770372	+	noncoding	SBF2-AS1	lncRNA	SENSE	ENSG00000246273	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_11p15.4	HERV	HERVFRD	oneside	chr11	10004952	10009081	+	noncoding	SBF2	protein_coding	ANTISENSE	ENSG00000133812	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_11p15.4c	HERV	HUERSP1	oneside	chr11	10100175	10103791	+	noncoding	SBF2	protein_coding	ANTISENSE	ENSG00000133812	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11p15.4c	HERV	ERVLE	internal	chr11	10211295	10214007	-	noncoding	SBF2	protein_coding	SENSE	ENSG00000133812	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11p15.4d	HERV	ERVLE	internal	chr11	10348234	10349609	+	noncoding	AMPD3	protein_coding	SENSE	ENSG00000133805	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11p15.4e	HERV	ERVLE	internal	chr11	10833562	10839237	+	noncoding	ZBED5	protein_coding	ANTISENSE	ENSG00000236287	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11p15.4f	HERV	ERVLE	internal	chr11	10879797	10881141	+	noncoding	ZBED5-AS1	lncRNA	SENSE	ENSG00000247271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11p15.3	HERV	ERV316A3	oneside	chr11	12947378	12949058	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00958	ENSG00000251381	12483	TEAD1	ENSG00000187079	2641	None	None
ERVLE_11p15.3	HERV	ERVLE	internal	chr11	12984121	12985872	+	noncoding	LINC00958	lncRNA	ANTISENSE	ENSG00000251381	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4B_11p15.3	HERV	MER4B	internal	chr11	13646039	13651190	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAR1	ENSG00000197601	17478	HMGN2P36	ENSG00000228901	35268	None	None
HUERSP1_11p15.2a	HERV	HUERSP1	oneside	chr11	14164602	14168499	-	noncoding	SPON1	protein_coding	ANTISENSE	ENSG00000262655	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_11p15.2b	HERV	HUERSP1	oneside	chr11	14173965	14177906	-	noncoding	SPON1	protein_coding	ANTISENSE	ENSG00000262655	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_11p15.2	HERV	HERVH	prototype	chr11	14524261	14529062	+	noncoding	PSMA1	protein_coding	ANTISENSE	ENSG00000129084	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11p15.2a	HERV	ERVLE	internal	chr11	14560218	14560892	-	noncoding	PSMA1	protein_coding	SENSE	ENSG00000129084	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11p15.2a	HERV	ERV316A3	oneside	chr11	14622139	14625891	+	noncoding	PSMA1	protein_coding	ANTISENSE	ENSG00000129084	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11p15.2b	HERV	ERVLE	unknown	chr11	14837735	14841560	+	noncoding	PDE3B	protein_coding	SENSE	ENSG00000152270	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_11p15.2c	HERV	HUERSP1	oneside	chr11	15011625	15014622	-	noncoding	CALCB	protein_coding	ANTISENSE	ENSG00000175868	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_11p15.2d	HERV	HUERSP1	oneside	chr11	15023913	15027589	-	noncoding	CALCB	protein_coding	ANTISENSE	ENSG00000175868	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11p15.2b	HERV	ERV316A3	oneside	chr11	15029452	15031131	+	noncoding	CALCB	protein_coding	SENSE	ENSG00000175868	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11_11p15.2	HERV	HERVK11	prototype	chr11	15062959	15070542	-	noncoding	CALCB	protein_coding	ANTISENSE	ENSG00000175868	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_11p15.2	HERV	MER41	internal	chr11	16720947	16721616	+	noncoding	SOX6,C11orf58	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000110693,ENSG00000110696	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_11p15.1	HERV	HUERSP3	internal	chr11	17370374	17378687	+	noncoding	NCR3LG1	protein_coding	SENSE	ENSG00000188211	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVH_11p15.1a	HERV	HERVH	prototype	chr11	18643254	18649474	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPTY2D1	ENSG00000179119	8463	AP006296.1	ENSG00000257043	15576	None	chr11:18643478-18643517
MER41_11p15.1a	HERV	MER41	prototype	chr11	18682537	18692143	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP006296.1	ENSG00000257043	16989	TMEM86A	ENSG00000151117	979	None	None
HML1_11p15.1a	HERV	HML1	prototype	chr11	18817735	18822111	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRGPRX8P	ENSG00000276789	14193	PTPN5	ENSG00000110786	25014	None	None
HERVW_11p15.1	HERV	HERVW	internal	chr11	18818957	18820915	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRGPRX8P	ENSG00000276789	15389	PTPN5	ENSG00000110786	26236	None	None
HML1_11p15.1b	HERV	HML1	internal	chr11	18982403	18984554	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRGPRX10P	ENSG00000254720	9700	MRGPRX9P	ENSG00000255424	45143	None	None
MER41_11p15.1b	HERV	MER41	prototype	chr11	20200499	20207270	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DBX1	ENSG00000109851	40024	HTATIP2	ENSG00000109854	156415	None	None
MER34B_11p15.1a	HERV	MER34B	oneside	chr11	20339920	20342371	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DBX1	ENSG00000109851	179445	HTATIP2	ENSG00000109854	21314	None	chr11:20340754-20340759
MER34B_11p15.1b	HERV	MER34B	internal	chr11	20348776	20349916	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DBX1	ENSG00000109851	188301	HTATIP2	ENSG00000109854	13769	None	None
HERVH_11p15.1b	HERV	HERVH	prototype	chr11	20567875	20572655	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRMT3	ENSG00000185238	58537	HMGB1P40	ENSG00000255291	1531	None	None
HERVL18_11p15.1a	HERV	HERVL18	oneside	chr11	20856922	20859241	+	noncoding	NELL1	protein_coding	SENSE	ENSG00000165973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11p15.1	HERV	ERV316A3	oneside	chr11	21683299	21684284	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC130307.1	ENSG00000287753	98375	NELL1	ENSG00000165973	107613	None	None
HERVL18_11p15.1b	HERV	HERVL18	prototype	chr11	21810797	21814752	+	noncoding	AC130307.1,ANO5	lncRNA,protein_coding	SENSE,SENSE	ENSG00000287753,ENSG00000171714	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_11p14.3	HERV	MER101	prototype	chr11	22089620	22095780	-	noncoding	ANO5,AC116534.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000171714,ENSG00000287962	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVW_11p14.3a	HERV	HERVW	oneside	chr11	22312819	22318319	-	noncoding	AC104009.1	lncRNA	SENSE	ENSG00000254768	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11p14.3a	HERV	ERVLE	internal	chr11	22691971	22693876	-	noncoding	GAS2	protein_coding	ANTISENSE	ENSG00000148935	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_11p14.3	HERV	MER4	internal	chr11	22834929	22836573	+	noncoding	AC006299.1	lncRNA	SENSE	ENSG00000246225	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4B_11p14.3a	HERV	MER4B	internal	chr11	22836568	22838970	+	noncoding	AC006299.1	lncRNA	SENSE	ENSG00000246225	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_11p14.3	HERV	HERVIP10F	prototype	chr11	22992671	23000729	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02718	ENSG00000255418	153954	AC006299.1	ENSG00000246225	47278	None	None
PABLB_11p14.3	HERV	PABLB	internal	chr11	23016438	23020166	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02718	ENSG00000255418	134517	AC006299.1	ENSG00000246225	71045	None	None
ERVL_11p14.3	HERV	ERVL	internal	chr11	23103460	23105364	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006299.1	ENSG00000246225	158067	LINC02718	ENSG00000255418	49319	None	None
HERVH_11p14.3a	HERV	HERVH	prototype	chr11	23183934	23189744	-	noncoding	LINC02718	lncRNA	ANTISENSE	ENSG00000255418	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11p14.3a	HERV	ERV316A3	internal	chr11	23253188	23253713	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC100767.2	ENSG00000271491	116403	LINC02718	ENSG00000255418	50027	None	None
PABLA_11p14.3	HERV	PABLA	internal	chr11	23766860	23771404	-	noncoding	LINC02726,AC100768.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000255193,ENSG00000254861	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_11p14.3b	HERV	HERVH	prototype	chr11	23887264	23892921	-	noncoding	AC099842.1	processed_pseudogene	ANTISENSE	ENSG00000277803	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11p14.3b	HERV	ERV316A3	oneside	chr11	24085149	24086950	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099842.1	ENSG00000277803	191592	LINC02686	ENSG00000254594	148527	None	None
HML1_11p14.3	HERV	HML1	oneside	chr11	24228505	24230070	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099842.1	ENSG00000277803	334948	LINC02686	ENSG00000254594	5407	None	None
ERV316A3_11p14.3c	HERV	ERV316A3	prototype	chr11	24238039	24240680	-	noncoding	LINC02686	lncRNA	SENSE	ENSG00000254594	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11p14.3d	HERV	ERV316A3	internal	chr11	24345209	24346052	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02686	ENSG00000254594	82991	AC067902.1	ENSG00000207252	109859	None	None
MER4B_11p14.3b	HERV	MER4B	internal	chr11	24754301	24756560	-	noncoding	LUZP2	protein_coding	ANTISENSE	ENSG00000187398	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11p14.3b	HERV	ERVLE	internal	chr11	25120306	25123264	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087373.1	ENSG00000255368	17269	LUZP2	ENSG00000187398	37668	None	None
ERV316A3_11p14.3e	HERV	ERV316A3	oneside	chr11	25177486	25182878	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087373.1	ENSG00000255368	36463	RPL36AP40	ENSG00000240298	405597	None	None
HERVH_11p14.3c	HERV	HERVH	oneside	chr11	25326796	25330485	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL36AP40	ENSG00000240298	257990	AC087373.1	ENSG00000255368	185773	None	None
ERV316A3_11p14.3f	HERV	ERV316A3	oneside	chr11	25398239	25399314	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087373.1	ENSG00000255368	257216	RPL36AP40	ENSG00000240298	189161	None	None
HERVH_11p14.3d	HERV	HERVH	oneside	chr11	25486495	25490964	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL36AP40	ENSG00000240298	97511	AC087373.1	ENSG00000255368	345472	None	None
ERV316A3_11p14.3g	HERV	ERV316A3	oneside	chr11	25639149	25640433	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC100770.1	ENSG00000255454	8108	LINC02699	ENSG00000254456	94324	None	None
ERV316A3_11p14.3h	HERV	ERV316A3	oneside	chr11	25797269	25798019	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC013799.1	ENSG00000254754	126169	LINC02699	ENSG00000254456	15252	None	None
HERVW_11p14.3b	HERV	HERVW	oneside	chr11	26001116	26005726	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC013799.1	ENSG00000254754	74308	AC024341.1	ENSG00000255086	40261	None	None
HUERSP2_11p14.3	HERV	HUERSP2	prototype	chr11	26148039	26150485	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANO3	ENSG00000134343	38357	AC024341.1	ENSG00000255086	100441	None	None
HERVW_11p14.2	HERV	HERVW	prototype	chr11	26590431	26597675	-	noncoding	ANO3	protein_coding	ANTISENSE	ENSG00000134343	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr11:26597145-26597180,chr11:26597441-26597470
ERV316A3_11p14.2	HERV	ERV316A3	internal	chr11	26738715	26741356	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC5A12	ENSG00000148942	15288	FIBIN	ENSG00000176971	252756	None	None
MER41_11p14.2	HERV	MER41	oneside	chr11	26763841	26767574	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC5A12	ENSG00000148942	40414	FIBIN	ENSG00000176971	226538	None	None
ERVL_11p14.1	HERV	ERVL	prototype	chr11	27548823	27555802	-	noncoding	BDNF-AS	lncRNA	ANTISENSE	ENSG00000245573	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_11p14.1a	HERV	HERVH	prototype	chr11	27629072	27634926	-	noncoding	BDNF-AS,LINC00678	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000245573,ENSG00000254934	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_11p14.1	HERV	HUERSP1	prototype	chr11	27636181	27639100	-	noncoding	BDNF-AS	lncRNA	ANTISENSE	ENSG00000245573	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_11p14.1a	HERV	HERVL	oneside	chr11	27767705	27769257	-	noncoding	AC103796.1	lncRNA	SENSE	ENSG00000255496	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_11p14.1a	HERV	MER41	prototype	chr11	27928526	27933125	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090159.1	ENSG00000255094	45544	HSP90AA2P	ENSG00000224411	37493	None	None
LTR25_11p14.1	HERV	LTR25	internal	chr11	28134547	28139969	-	noncoding	METTL15	protein_coding	ANTISENSE	ENSG00000169519	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_11p14.1	HERV	HUERSP2	internal	chr11	28139987	28140539	-	noncoding	METTL15	protein_coding	ANTISENSE	ENSG00000169519	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_11p14.1b	HERV	HERVL	prototype	chr11	28157061	28160331	+	noncoding	METTL15	protein_coding	SENSE	ENSG00000169519	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11p14.1a	HERV	ERVLE	internal	chr11	28451939	28454736	-	noncoding	METTL15	protein_coding	ANTISENSE	ENSG00000169519	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11p14.1a	HERV	ERV316A3	internal	chr11	28611488	28612681	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02758	ENSG00000248990	66502	METTL15	ENSG00000169519	84447	None	None
ERVLE_11p14.1b	HERV	ERVLE	internal	chr11	29136551	29137209	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090791.1	ENSG00000254526	22747	LINC02742	ENSG00000249867	72229	None	None
HERV3_11p14.1	HERV	HERV3	prototype	chr11	29518506	29527987	+	noncoding	LINC02755,AC110058.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000254530,ENSG00000255029	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11p14.1b	HERV	ERV316A3	oneside	chr11	29677514	29678643	-	noncoding	LINC02755	lncRNA	SENSE	ENSG00000254530	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_11p14.1b	HERV	HERVH	oneside	chr11	29705754	29707328	-	noncoding	LINC02755	lncRNA	SENSE	ENSG00000254530	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11p14.1c	HERV	ERV316A3	oneside	chr11	29822381	29823949	-	noncoding	LINC02755,AC107973.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000254530,ENSG00000254734	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_11p14.1c	HERV	HERVH	oneside	chr11	29973622	29977330	+	noncoding	LINC02755	lncRNA	ANTISENSE	ENSG00000254530	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_11p14.1	HERV	HERVL18	prototype	chr11	30044711	30047428	+	noncoding	AL358944.1	lncRNA	ANTISENSE	ENSG00000254532	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_11p14.1b	HERV	MER41	oneside	chr11	30639955	30642603	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MPPED2-AS1	ENSG00000254489	7372	AL122014.1	ENSG00000287373	131310	None	None
PABLA_11p14.1	HERV	PABLA	internal	chr11	30642598	30644796	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MPPED2-AS1	ENSG00000254489	10015	AL122014.1	ENSG00000287373	129117	None	None
HERVP71A_11p14.1	HERV	HERVP71A	prototype	chr11	30933692	30939820	-	noncoding	DCDC1	protein_coding	SENSE	ENSG00000170959	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11p14.1c	HERV	ERVLE	internal	chr11	30957507	30958822	+	noncoding	DCDC1	protein_coding	ANTISENSE	ENSG00000170959	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH21_11p13	HERV	HERVFH21	internal	chr11	31607846	31609655	-	coding	ELP4	protein_coding	ANTISENSE	ENSG00000109911	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:31608550-31608610	None
MER101_11p13	HERV	MER101	internal	chr11	32864409	32865580	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	QSER1	ENSG00000060749	27240	PRRG4	ENSG00000135378	6289	None	None
ERV316A3_11p13a	HERV	ERV316A3	internal	chr11	33202751	33203516	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC131263.1	ENSG00000200485	6114	AL136126.1	ENSG00000241255	33492	None	None
ERV316A3_11p13b	HERV	ERV316A3	prototype	chr11	34846637	34850312	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359999.1	ENSG00000270491	103438	APIP	ENSG00000149089	2782	None	None
ERV316A3_11p13c	HERV	ERV316A3	oneside	chr11	34865534	34870913	-	noncoding	APIP	protein_coding	SENSE	ENSG00000149089	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_11p13	HERV	HUERSP3	oneside	chr11	34897477	34907140	+	noncoding	APIP	protein_coding	ANTISENSE	ENSG00000149089	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:34898332-34898676	None
ERVLE_11p13	HERV	ERVLE	internal	chr11	35104571	35106531	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PDHX	ENSG00000110435	83980	AL356215.1	ENSG00000255521	26124	None	None
ERV316A3_11p13d	HERV	ERV316A3	oneside	chr11	35533578	35535594	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PAMR1	ENSG00000149090	3278	AL135934.1	ENSG00000254669	43836	None	None
MER41_11p13	HERV	MER41	internal	chr11	35701441	35702220	-	noncoding	TRIM44	protein_coding	ANTISENSE	ENSG00000166326	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_11p13	HERV	ERVLB4	internal	chr11	35844981	35847278	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090692.2	ENSG00000285705	6458	KRT18P14	ENSG00000186082	12971	None	None
ERVL_11p13	HERV	ERVL	internal	chr11	35845525	35846362	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT18P14	ENSG00000186082	13887	AC090692.2	ENSG00000285705	7002	None	None
HUERSP3B_11p12	HERV	HUERSP3B	prototype	chr11	36665205	36673420	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C11orf74	ENSG00000166352	5915	AC104042.1	ENSG00000254498	22897	None	None
HERVL32_11p12a	HERV	HERVL32	oneside	chr11	36880518	36883340	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104042.1	ENSG00000254498	182651	AC061997.1	ENSG00000251838	818785	None	None
HERVL32_11p12b	HERV	HERVL32	oneside	chr11	36883393	36886216	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104042.1	ENSG00000254498	185526	AC061997.1	ENSG00000251838	815909	None	None
MER61_11p12a	HERV	MER61	oneside	chr11	36921119	36922825	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC061997.1	ENSG00000251838	779300	AC104042.1	ENSG00000254498	223252	None	None
ERVLB4_11p12	HERV	ERVLB4	internal	chr11	37066646	37067862	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104042.1	ENSG00000254498	368779	AC061997.1	ENSG00000251838	634263	None	None
HERVL_11p12a	HERV	HERVL	internal	chr11	37349307	37350849	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104042.1	ENSG00000254498	651440	AC061997.1	ENSG00000251838	351276	None	None
ERV316A3_11p12a	HERV	ERV316A3	internal	chr11	37373389	37375713	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104042.1	ENSG00000254498	675522	AC061997.1	ENSG00000251838	326412	None	None
HERVH_11p12a	HERV	HERVH	prototype	chr11	37578383	37583372	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC061997.1	ENSG00000251838	118753	AC104042.1	ENSG00000254498	880516	None	None
HERVL18_11p12a	HERV	HERVL18	prototype	chr11	37905725	37908785	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02760	ENSG00000254516	29816	RPL7AP56	ENSG00000242834	179269	None	None
ERVLE_11p12a	HERV	ERVLE	oneside	chr11	38066064	38068359	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LRRC6P1	ENSG00000254784	143030	AC103798.1	ENSG00000279004	51923	None	None
ERVLE_11p12b	HERV	ERVLE	internal	chr11	38072516	38074217	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LRRC6P1	ENSG00000254784	137172	AC103798.1	ENSG00000279004	58375	None	None
HERVL40_11p12	HERV	HERVL40	oneside	chr11	38330482	38333787	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LRRC6P1	ENSG00000254784	117683	AC021713.1	ENSG00000255477	165208	None	None
HERVL_11p12b	HERV	HERVL	oneside	chr11	38533109	38538599	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02759	ENSG00000255175	79665	AC021713.1	ENSG00000255477	32923	None	None
HERVW_11p12	HERV	HERVW	prototype	chr11	38601589	38607240	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021713.1	ENSG00000255477	101403	LINC02759	ENSG00000255175	11024	None	None
HERVL_11p12c	HERV	HERVL	oneside	chr11	38627315	38632102	+	noncoding	LINC02759	lncRNA	ANTISENSE	ENSG00000255175	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_11p12d	HERV	HERVL	prototype	chr11	39125839	39131643	+	noncoding	AC021723.2	lncRNA	ANTISENSE	ENSG00000285751	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_11p12	HERV	LTR57	internal	chr11	39279222	39280505	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-99P	ENSG00000201591	18009	AC021749.1	ENSG00000270588	593277	None	None
HERVL18_11p12b	HERV	HERVL18	oneside	chr11	39339779	39344111	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021749.1	ENSG00000270588	529671	RNU6-99P	ENSG00000201591	78566	chr11:39339919-39340225	None
HERV9_11p12	HERV	HERV9	prototype	chr11	39560214	39567289	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-99P	ENSG00000201591	299001	AC021749.1	ENSG00000270588	306493	None	None
HERVH_11p12b	HERV	HERVH	prototype	chr11	39734126	39741063	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-99P	ENSG00000201591	472913	AC021749.1	ENSG00000270588	132719	None	None
HUERSP2_11p12a	HERV	HUERSP2	prototype	chr11	39965720	39968820	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021749.1	ENSG00000270588	91332	AC021820.1	ENSG00000255347	114890	None	None
MER61_11p12b	HERV	MER61	prototype	chr11	40099468	40105610	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021820.1	ENSG00000255347	14951	AC080100.1	ENSG00000279675	1634	None	chr11:40099512-40099524,chr11:40099526-40099559
ERV316A3_11p12b	HERV	ERV316A3	prototype	chr11	40562670	40565752	+	noncoding	LRRC4C	protein_coding	ANTISENSE	ENSG00000148948	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_11p12b	HERV	HUERSP2	oneside	chr11	41790342	41794076	+	noncoding	LINC01499	lncRNA	SENSE	ENSG00000255171	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_11p12a	HERV	MER101	oneside	chr11	41809644	41812789	-	noncoding	LINC01499	lncRNA	ANTISENSE	ENSG00000255171	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_11p12b	HERV	MER101	oneside	chr11	41813093	41817546	-	noncoding	LINC01499	lncRNA	ANTISENSE	ENSG00000255171	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11p12c	HERV	ERV316A3	internal	chr11	41879183	41883026	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02745	ENSG00000255300	110355	AC023442.2	ENSG00000254822	2105	None	None
ERV316A3_11p12d	HERV	ERV316A3	oneside	chr11	41981100	41982476	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02745	ENSG00000255300	10905	AC023442.2	ENSG00000254822	104022	None	None
ERVLE_11p12c	HERV	ERVLE	internal	chr11	42115361	42117813	-	noncoding	LINC02745	lncRNA	SENSE	ENSG00000255300	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_11p12c	HERV	HERVH	prototype	chr11	42120989	42125302	+	noncoding	LINC02745	lncRNA	ANTISENSE	ENSG00000255300	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11p12g	HERV	ERV316A3	tandem*	chr11	42324293	42330948	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02740	ENSG00000255109	70572	AC109810.1	ENSG00000254914	608827	None	None
HERVL_11p12e	HERV	HERVL	prototype	chr11	42385711	42388705	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02740	ENSG00000255109	131990	AC109810.1	ENSG00000254914	551070	None	None
ERV316A3_11p12e	HERV	ERV316A3	oneside	chr11	42653699	42658499	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC109810.1	ENSG00000254914	281276	LINC02740	ENSG00000255109	399978	None	None
ERV316A3_11p12f	HERV	ERV316A3	internal	chr11	42788248	42789944	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC109810.1	ENSG00000254914	149831	LINC02740	ENSG00000255109	534527	None	None
HERVK11D_11p12	HERV	HERVK11D	prototype	chr11	43161739	43168627	-	coding	HNRNPKP3	transcribed_processed_pseudogene	SENSE	ENSG00000251557	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_11p11.2	HERV	ERVLB4	internal	chr11	43524498	43528497	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTBP2P6	ENSG00000213697	1234	AC068205.1	ENSG00000283217	27939	None	chr11:43528015-43528018
ERVLE_11p11.2a	HERV	ERVLE	internal	chr11	43758365	43758897	-	noncoding	AC068205.2,HSD17B12	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000283341,ENSG00000149084	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_11p11.2	HERV	HERVE	oneside	chr11	43783992	43785498	-	noncoding	AC068205.2,HSD17B12	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000283341,ENSG00000149084	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11p11.2b	HERV	ERVLE	internal	chr11	43874661	43878914	-	noncoding	AC087521.2	lncRNA	SENSE	ENSG00000246250	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11p11.2c	HERV	ERVLE	internal	chr11	44100274	44102262	+	noncoding	EXT2	protein_coding	SENSE	ENSG00000151348	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_11p11.2a	HERV	HERVL	oneside	chr11	44414860	44416917	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ALX4	ENSG00000052850	104721	AC010768.4	ENSG00000255451	51547	None	None
ERV316A3_11p11.2	HERV	ERV316A3	oneside	chr11	44492028	44495380	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010768.4	ENSG00000255451	21599	AC010768.3	ENSG00000255106	44398	None	None
HERVL_11p11.2b	HERV	HERVL	prototype	chr11	44544093	44550636	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC010768.3	ENSG00000255106	3400	CD82	ENSG00000085117	13791	None	chr11:44550451-44550456
ERVLE_11p11.2d	HERV	ERVLE	internal	chr11	45111306	45111901	+	noncoding	PRDM11	protein_coding	SENSE	ENSG00000019485	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_11p11.2	HERV	MER4	internal	chr11	48291080	48291868	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4X1	ENSG00000176567	26302	OR4S1	ENSG00000176555	14355	None	None
PABLA_11p11.2	HERV	PABLA	internal	chr11	48291871	48292432	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4X1	ENSG00000176567	27093	OR4S1	ENSG00000176555	13791	None	None
HUERSP3B_11p11.2	HERV	HUERSP3B	prototype	chr11	48378988	48386173	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4C2P	ENSG00000182565	34037	OR4C5	ENSG00000176540	12523	None	None
HERVH_11p11.12	HERV	HERVH	prototype	chr11	49320583	49326841	-	noncoding	AC118942.1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000255532	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_11p11.12a	HERV	HUERSP3B	oneside	chr11	49734692	49739721	-	noncoding	AC136759.1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000205035	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_11p11.12b	HERV	HUERSP3B	oneside	chr11	49740152	49743469	-	noncoding	AC136759.1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000205035	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11p11.12	HERV	ERVLE	internal	chr11	49894513	49895357	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP006587.2	ENSG00000255111	736	OR4A1P	ENSG00000254408	2910	None	None
LTR25_11p11.12	HERV	LTR25	internal	chr11	49995075	50001037	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4C12	ENSG00000221954	12540	OR4C48P	ENSG00000283605	17761	None	None
HERVK11_11p11.12a	HERV	HERVK11	prototype	chr11	50438109	50447967	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC024405.1	ENSG00000214883	15793	OR4C50P	ENSG00000237610	4143513	None	None
HERVK11_11p11.12b	HERV	HERVK11	oneside	chr11	50487846	50491301	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4C50P	ENSG00000237610	4100179	AC024405.1	ENSG00000214883	65530	None	None
HERVK11_11p11.12c	HERV	HERVK11	oneside	chr11	50491354	50495620	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4C50P	ENSG00000237610	4095860	AC024405.1	ENSG00000214883	69038	None	None
HML3_11p11.12a	HERV	HML3	prototype	chr11	50508440	50514436	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC024405.1	ENSG00000214883	86124	OR4C50P	ENSG00000237610	4077044	None	None
HML3_11p11.12b	HERV	HML3	oneside	chr11	50552849	50554412	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC024405.1	ENSG00000214883	130533	OR4C50P	ENSG00000237610	4037068	None	None
HERVK11_11p11.12d	HERV	HERVK11	prototype	chr11	50629511	50637577	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4C50P	ENSG00000237610	3953903	AC024405.1	ENSG00000214883	207195	None	None
LTR25_11q11	HERV	LTR25	internal	chr11	54554832	54559820	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4C50P	ENSG00000237610	31660	AC024405.1	ENSG00000214883	4132516	None	None
HERVK11_11q11	HERV	HERVK11	prototype	chr11	54758680	54766192	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4A6P	ENSG00000255078	32864	TRIM48	ENSG00000150244	495963	None	None
ERVLE_11q11a	HERV	ERVLE	internal	chr11	55353912	55355908	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4A15	ENSG00000181958	11976	OR4A16	ENSG00000181961	9681	None	None
ERVLE_11q11b	HERV	ERVLE	internal	chr11	55380979	55381766	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4A9P	ENSG00000254891	6763	OR4A15	ENSG00000181958	12061	None	None
ERVLE_11q11c	HERV	ERVLE	internal	chr11	55418106	55418941	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4A10P	ENSG00000255493	11537	OR4X7P	ENSG00000255077	6389	None	None
ERVLE_11q11d	HERV	ERVLE	internal	chr11	55448351	55449240	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4A13P	ENSG00000181950	17531	OR4A17P	ENSG00000255196	3013	None	None
ERVLE_11q11e	HERV	ERVLE	internal	chr11	55481533	55482431	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4A21P	ENSG00000181943	8774	OR4A50P	ENSG00000255294	3021	None	None
HERVH48_11q11a	HERV	HERVH48	oneside	chr11	55555550	55558477	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4C15	ENSG00000181939	131	OR4C16	ENSG00000279514	13651	None	None
HERVH_11q11	HERV	HERVH	prototype	chr11	55559430	55563896	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4C15	ENSG00000181939	4011	OR4C16	ENSG00000279514	8232	None	None
MER4_11q11	HERV	MER4	internal	chr11	55573815	55576932	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4C11	ENSG00000172188	25428	OR4C16	ENSG00000279514	755	None	None
HERVH48_11q11b	HERV	HERVH48	oneside	chr11	55583344	55587752	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4C16	ENSG00000279514	10284	OR4C11	ENSG00000172188	14608	None	None
ERV316A3_11q11	HERV	ERV316A3	internal	chr11	55653653	55655396	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4C6	ENSG00000181903	6805	OR4S2	ENSG00000174982	799	None	None
ERVL_11q11	HERV	ERVL	internal	chr11	55691865	55692718	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5D2P	ENSG00000254457	22081	AP006437.1	ENSG00000254804	5705	None	None
MER61_11q12.1a	HERV	MER61	oneside	chr11	55856815	55860113	+	noncoding	OR9M1P	transcribed_unprocessed_pseudogene	SENSE	ENSG00000186124	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER61_11q12.1b	HERV	MER61	oneside	chr11	55894020	55895855	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRIM51	ENSG00000124900	2210	OR5W1P	ENSG00000227806	7486	None	None
ERVLB4_11q12.1a	HERV	ERVLB4	internal	chr11	56004358	56005424	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5F2P	ENSG00000182365	9593	OR5F1	ENSG00000149133	9733	None	None
ERVLB4_11q12.1b	HERV	ERVLB4	internal	chr11	56008391	56009436	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5F2P	ENSG00000182365	5581	OR5F1	ENSG00000149133	13766	None	None
HERVL_11q12.1a	HERV	HERVL	oneside	chr11	56039239	56045298	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5AS1	ENSG00000181785	1048	OR5AQ1P	ENSG00000184741	4487	None	None
ERVLB4_11q12.1c	HERV	ERVLB4	oneside	chr11	56311459	56314964	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR8I1P	ENSG00000255461	13988	OR8K3	ENSG00000280314	180	None	None
HML1_11q12.1	HERV	HML1	prototype	chr11	56327845	56333225	-	coding	FAM8A2P	unprocessed_pseudogene	SENSE	ENSG00000254722	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_11q12.1a	HERV	MER41	internal	chr11	56399846	56400878	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5AL1	ENSG00000272987	11818	OR5AL2P	ENSG00000255466	5198	None	None
ERVLB4_11q12.1d	HERV	ERVLB4	oneside	chr11	56519295	56521802	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5M5P	ENSG00000185701	4766	OR5M6P	ENSG00000254603	6124	None	None
HERVL_11q12.1b	HERV	HERVL	internal	chr11	56605241	56606837	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5M13P	ENSG00000166693	6879	OR5M1	ENSG00000255012	2399	None	None
MER101_11q12.1a	HERV	MER101	internal	chr11	56728325	56733543	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001803.1	ENSG00000254953	2773	OR9G1	ENSG00000174914	24441	None	None
MER101_11q12.1b	HERV	MER101	oneside	chr11	56733861	56735811	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001803.1	ENSG00000254953	505	OR9G1	ENSG00000174914	29977	None	None
ERV316A3_11q12.1a	HERV	ERV316A3	oneside	chr11	56814563	56816937	+	noncoding	OR5G5P	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000205025	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11q12.1	HERV	ERVLE	internal	chr11	56837193	56840326	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5G3	ENSG00000241356	16677	LINC02735	ENSG00000255433	8152	None	None
MER4_11q12.1a	HERV	MER4	prototype	chr11	56864902	56872748	+	noncoding	LINC02735	lncRNA	SENSE	ENSG00000255433	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_11q12.1	HERV	HERVP71A	oneside	chr11	56949868	56952298	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FADS2B	ENSG00000274150	21983	OR5AK3P	ENSG00000181282	18552	None	chr11:56950203-56950206
MER61_11q12.1c	HERV	MER61	oneside	chr11	56984335	56985313	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5AK2	ENSG00000181273	3559	OR5AK3P	ENSG00000181282	12189	None	None
HUERSP2_11q12.1	HERV	HUERSP2	oneside	chr11	57000039	57003516	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5AK1P	ENSG00000255083	14584	OR5AK2	ENSG00000181273	10172	None	chr11:57002510-57002514
HERVL_11q12.1c	HERV	HERVL	oneside	chr11	57650629	57651896	+	noncoding	AP000662.1,CLP1	lncRNA,protein_coding	SENSE,SENSE	ENSG00000254602,ENSG00000172409	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4B_11q12.1	HERV	MER4B	tandem*	chr11	57719337	57731650	+	noncoding	AP001931.2,TMX2	protein_coding,protein_coding	SENSE,SENSE	ENSG00000288534,ENSG00000213593	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_11q12.1a	HERV	PABLA	internal	chr11	57905032	57908276	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5AZ1P	ENSG00000180714	9021	OR5BA1P	ENSG00000255303	31444	None	None
ERVLB4_11q12.1e	HERV	ERVLB4	prototype	chr11	58290435	58291565	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR10W1	ENSG00000172772	22175	OR10Q2P	ENSG00000272900	261	None	None
ERVL_11q12.1	HERV	ERVL	prototype	chr11	58480798	58487822	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5B12	ENSG00000172362	38040	AP003557.2	ENSG00000285895	3951	None	None
MER4_11q12.1b	HERV	MER4	prototype	chr11	58716702	58722729	-	noncoding	GLYAT	protein_coding	SENSE	ENSG00000149124	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_11q12.1	HERV	HERVFRD	oneside	chr11	58725540	58727626	-	noncoding	GLYAT	protein_coding	SENSE	ENSG00000149124	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_11q12.1	HERV	LTR25	internal	chr11	58740679	58743259	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GLYAT	ENSG00000149124	8705	AP000445.2	ENSG00000254926	5740	None	None
PABLA_11q12.1b	HERV	PABLA	internal	chr11	58791840	58797425	-	noncoding	TMA16P1	processed_pseudogene	SENSE	ENSG00000255265	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PABLA_11q12.1c	HERV	PABLA	internal	chr11	58797556	58798762	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GLYATL2	ENSG00000156689	35303	TMA16P1	ENSG00000255265	702	None	None
MER4_11q12.1c	HERV	MER4	oneside	chr11	58810766	58813913	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMA16P1	ENSG00000255265	13912	GLYATL2	ENSG00000156689	20152	None	None
MER4_11q12.1d	HERV	MER4	oneside	chr11	58823710	58828772	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMA16P1	ENSG00000255265	26856	GLYATL2	ENSG00000156689	5293	None	None
HERV3_11q12.1	HERV	HERV3	oneside	chr11	58917283	58923130	-	noncoding	GLYATL1,AP001652.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000166840,ENSG00000255523	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVKC4_11q12.1	HERV	HERVKC4	internal	chr11	58924566	58925529	-	noncoding	GLYATL1,AP001652.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000166840,ENSG00000255523	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_11q12.1	HERV	HML5	oneside	chr11	58925599	58929132	-	noncoding	GLYATL1,AP001652.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000166840,ENSG00000255523	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr11:58927623-58927645,chr11:58927659-58927677,chr11:58927704-58927715,chr11:58927426-58927439,chr11:58927732-58927758
HML2_11q12.1	HERV	HML2	oneside	chr11	59000009	59005723	+	noncoding	GLYATL1,AP001636.3	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000166840,ENSG00000255240	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:59000150-59000266	None
HERVL40_11q12.1	HERV	HERVL40	internal	chr11	59157554	59158956	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM111A	ENSG00000166801	2515	DTX4	ENSG00000110042	12474	None	None
ERV316A3_11q12.1b	HERV	ERV316A3	internal	chr11	59159326	59161536	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM111A	ENSG00000166801	4287	DTX4	ENSG00000110042	9894	None	None
HERVL_11q12.1d	HERV	HERVL	prototype	chr11	59276041	59282777	+	coding	AP002358.1	lncRNA	ANTISENSE	ENSG00000214797	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_11q12.1b	HERV	MER41	oneside	chr11	59291970	59298191	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5AN2P	ENSG00000235678	11490	RN7SL435P	ENSG00000263944	637	None	None
MER41_11q12.1c	HERV	MER41	internal	chr11	59400895	59405252	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5BB1P	ENSG00000198261	8603	OR5A2	ENSG00000172324	11717	None	None
MER4_11q12.1e	HERV	MER4	prototype	chr11	59814403	59816727	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CBLIF	ENSG00000134812	12546	MRPL16	ENSG00000166902	3625	chr11:59815361-59815683	chr11:59815913-59815945
HML3_11q12.1	HERV	HML3	prototype	chr11	59923570	59929756	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SRD5A3P1	ENSG00000270929	24437	OOSP1	ENSG00000284873	8676	None	None
HARLEQUIN_11q12.2a	HERV	HARLEQUIN	prototype	chr11	60101382	60108972	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02705	ENSG00000254952	50715	MS4A2	ENSG00000149534	2915	chr11:60104686-60104976	chr11:60108418-60108430,chr11:60108620-60108625
HERVL18_11q12.2	HERV	HERVL18	oneside	chr11	60167847	60169566	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MS4A6A	ENSG00000110077	2448	LINC02705	ENSG00000254952	7025	None	None
HARLEQUIN_11q12.2b	HERV	HARLEQUIN	prototype	chr11	60185446	60193188	+	noncoding	MS4A4A	protein_coding	SENSE	ENSG00000110079	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_11q12.2	HERV	HERVL	prototype	chr11	60216680	60223953	+	noncoding	MS4A4A,MS4A4E	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000110079,ENSG00000214787	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_11q12.2	HERV	HUERSP3	oneside	chr11	60342306	60348945	-	noncoding	MS4A6E	protein_coding	ANTISENSE	ENSG00000166926	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_11q12.2a	HERV	ERVLB4	prototype	chr11	60421488	60424729	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MS4A5	ENSG00000166930	4843	MS4A14	ENSG00000166928	3732	None	None
MER61_11q12.2	HERV	MER61	oneside	chr11	60563473	60565603	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003399.1	ENSG00000283601	12253	MS4A13	ENSG00000204979	20752	None	None
ERVLB4_11q12.2b	HERV	ERVLB4	oneside	chr11	60654699	60657207	+	noncoding	LINC00301	transcribed_unitary_pseudogene	SENSE	ENSG00000181995	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML5_11q12.2	HERV	HML5	internal	chr11	60758287	60762429	+	noncoding	MS4A15	protein_coding	SENSE	ENSG00000166961	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11q12.2	HERV	ERVLE	internal	chr11	60964616	60965963	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC15A3	ENSG00000110446	12086	CD6	ENSG00000013725	5717	None	None
HERVEA_11q12.2	HERV	HERVEA	prototype	chr11	61093594	61098841	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP003721.2	ENSG00000256733	25997	CD5	ENSG00000110448	3648	None	None
MER4_11q12.2	HERV	MER4	oneside	chr11	61372805	61377565	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM138	ENSG00000149483	3296	TMEM216	ENSG00000187049	14795	None	None
HML6_11q12.3a	HERV	HML6	prototype	chr11	62049779	62056355	-	noncoding	LINC02733	lncRNA	SENSE	ENSG00000255553	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_11q12.3a	HERV	MER4	internal	chr11	62087302	62091236	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02733	ENSG00000255553	5118	AP002793.1	ENSG00000285656	25234	None	None
HERVIP10F_11q12.3	HERV	HERVIP10F	oneside	chr11	62215040	62223427	+	noncoding	AP003306.1	lncRNA	ANTISENSE	ENSG00000254404	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_11q12.3b	HERV	HML6	oneside	chr11	62251757	62254111	+	noncoding	AP003306.1	lncRNA	ANTISENSE	ENSG00000254404	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH48_11q12.3	HERV	HERVH48	oneside	chr11	62273986	62275876	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SCGB1D4	ENSG00000197745	20405	SCGB2A2	ENSG00000110484	826	None	None
MER61_11q12.3	HERV	MER61	internal	chr11	62276582	62277666	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SCGB1D4	ENSG00000197745	18615	SCGB2A2	ENSG00000110484	3422	None	None
MER4_11q12.3b	HERV	MER4	internal	chr11	62280344	62284051	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SCGB2A2	ENSG00000110484	7184	SCGB1D4	ENSG00000197745	12230	None	None
MER4_11q12.3c	HERV	MER4	unknown	chr11	62284134	62288946	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SCGB1D4	ENSG00000197745	7335	SCGB2A2	ENSG00000110484	10974	None	None
HUERSP3B_11q12.3	HERV	HUERSP3B	internal	chr11	62301271	62302558	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SCGB1D4	ENSG00000197745	2196	NPM1P35	ENSG00000255213	28388	None	None
HML2_11q12.3a	HERV	HML2	oneside	chr11	62368491	62370999	-	noncoding	ASRGL1	protein_coding	ANTISENSE	ENSG00000162174	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_11q12.3b	HERV	HML2	oneside	chr11	62375545	62383091	-	noncoding	ASRGL1	protein_coding	ANTISENSE	ENSG00000162174	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11q12.3	HERV	ERV316A3	internal	chr11	62863562	62866118	-	noncoding	SLC3A2	protein_coding	ANTISENSE	ENSG00000168003	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_11q12.3	HERV	HUERSP1	prototype	chr11	63136567	63142914	+	noncoding	SLC22A24,SLC22A10	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000197658,ENSG00000184999	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL74_11q12.3	HERV	HERVL74	internal	chr11	63248261	63251783	+	noncoding	SLC22A10	protein_coding	SENSE	ENSG00000184999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_11q12.3	HERV	HERVH	unknown	chr11	63452639	63459507	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC22A9	ENSG00000149742	42345	PLAAT5	ENSG00000168004	1897	None	None
ERVLE_11q13.1a	HERV	ERVLE	internal	chr11	64397783	64403305	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02723	ENSG00000231680	1952	AP003774.1	ENSG00000231492	17006	None	None
ERV316A3_11q13.1a	HERV	ERV316A3	oneside	chr11	64449595	64450882	+	noncoding	LINC02724	lncRNA	SENSE	ENSG00000181908	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11q13.1b	HERV	ERV316A3	oneside	chr11	64451182	64458279	+	noncoding	LINC02724	lncRNA	SENSE	ENSG00000181908	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11q13.1b	HERV	ERVLE	internal	chr11	64518333	64522556	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP006288.1	ENSG00000237363	8488	AP005273.1	ENSG00000232500	12947	None	None
HERVP71A_11q13.2	HERV	HERVP71A	oneside	chr11	66441882	66443982	-	noncoding	MRPL11	protein_coding	SENSE	ENSG00000174547	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_11q13.2a	HERV	HERVH	prototype	chr11	66573597	66576956	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTSF	ENSG00000174080	4756	CCDC87	ENSG00000182791	13220	None	None
MER101_11q13.2	HERV	MER101	internal	chr11	67654639	67661572	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003385.1	ENSG00000227834	1235	ALDH3B2	ENSG00000132746	588	None	None
MER4B_11q13.2	HERV	MER4B	oneside	chr11	67679749	67683767	+	noncoding	ALDH3B2,RPL37P2	protein_coding,processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000132746,ENSG00000239559	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr11:67683078-67683085
HERVIP10F_11q13.2	HERV	HERVIP10F	oneside	chr11	67689713	67696211	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UNC93B5	ENSG00000184795	15491	RPL37P2	ENSG00000239559	6655	None	chr11:67695718-67695722
HERVK11_11q13.2	HERV	HERVK11	prototype	chr11	67698550	67705411	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL37P2	ENSG00000239559	15492	UNC93B5	ENSG00000184795	6291	None	None
HERVE_11q13.2a	HERV	HERVE	internal	chr11	67726810	67730864	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR7E11P	ENSG00000254447	4736	OR7E145P	ENSG00000235855	3355	None	chr11:67729489-67729528
HERVH_11q13.2b	HERV	HERVH	prototype	chr11	67759685	67765364	+	noncoding	OR7E11P	lncRNA	ANTISENSE	ENSG00000254447	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_11q13.2c	HERV	HERVH	oneside	chr11	67841906	67845157	-	noncoding	ENPP7P7	unprocessed_pseudogene	SENSE	ENSG00000273819	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_11q13.2b	HERV	HERVE	oneside	chr11	67845158	67853485	-	noncoding	ENPP7P7	unprocessed_pseudogene	SENSE	ENSG00000273819	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_11q13.2d	HERV	HERVH	oneside	chr11	67853486	67856961	-	noncoding	ENPP7P7	unprocessed_pseudogene	SENSE	ENSG00000273819	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVS71_11q13.2	HERV	HERVS71	prototype	chr11	67882066	67889515	-	coding	LINC02754	lncRNA	ANTISENSE	ENSG00000251637	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_11q13.2	HERV	ERVLB4	internal	chr11	67957462	67958064	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004923.1	ENSG00000254610	1660	AC004923.3	ENSG00000255230	7809	None	None
HERVE_11q13.2c	HERV	HERVE	internal	chr11	67978497	67982552	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UNC93B1	ENSG00000110057	8548	OR7E1P	ENSG00000255554	3254	None	None
HERVH_11q13.2e	HERV	HERVH	prototype	chr11	68622705	68632796	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003096.1	ENSG00000260808	5994	GAL	ENSG00000069482	50983	None	None
HERVH_11q13.2f	HERV	HERVH	prototype	chr11	68633778	68639439	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003096.1	ENSG00000260808	17067	GAL	ENSG00000069482	44340	None	None
ERV316A3_11q13.2	HERV	ERV316A3	internal	chr11	68640425	68641821	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003096.1	ENSG00000260808	23714	GAL	ENSG00000069482	41958	None	None
HERV3_11q13.3	HERV	HERV3	prototype	chr11	68867426	68874582	+	noncoding	LINC02701	lncRNA	SENSE	ENSG00000250508	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11q13.3a	HERV	ERVLE	internal	chr11	69021006	69028229	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TPCN2	ENSG00000162341	20703	MRGPRF-AS1	ENSG00000256508	2559	None	None
ERVLE_11q13.3b	HERV	ERVLE	internal	chr11	69059046	69060177	-	noncoding	TPCN2	protein_coding	ANTISENSE	ENSG00000162341	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:69060059-69060230	None
ERV316A3_11q13.3	HERV	ERV316A3	oneside	chr11	69383332	69384472	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005233.2	ENSG00000260877	10820	AP005233.1	ENSG00000259854	29835	None	None
ERVLE_11q13.3c	HERV	ERVLE	internal	chr11	69606279	69610466	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCND1	ENSG00000110092	30690	LINC01488	ENSG00000285094	111327	None	None
HERVIP10F_11q13.3	HERV	HERVIP10F	oneside	chr11	70038173	70040465	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003555.1	ENSG00000254605	17114	LINC02753	ENSG00000248844	15765	None	None
HERVH_11q13.3a	HERV	HERVH	oneside	chr11	70057466	70059950	-	noncoding	LINC02753	lncRNA	SENSE	ENSG00000248844	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_11q13.3b	HERV	HERVH	internal	chr11	70059976	70061420	-	noncoding	LINC02753	lncRNA	SENSE	ENSG00000248844	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:70059954-70059977	chr11:70059974-70059977
HERVH_11q13.3c	HERV	HERVH	prototype	chr11	70213950	70220156	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPFIA1	ENSG00000131626	50544	AP000879.1	ENSG00000254721	6560	None	None
ERVLE_11q13.4a	HERV	ERVLE	internal	chr11	70524189	70525264	+	noncoding	SHANK2	protein_coding	ANTISENSE	ENSG00000162105	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:70524466-70524842,chr11:70525229-70525484	None
HERVL40_11q13.4a	HERV	HERVL40	prototype	chr11	71182774	71188088	+	noncoding	SHANK2	protein_coding	ANTISENSE	ENSG00000162105	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11q13.4b	HERV	ERVLE	internal	chr11	71573304	71575481	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000867.1	ENSG00000248903	4370	KRTAP5-11	ENSG00000204571	4233	None	None
HERVE_11q13.4a	HERV	HERVE	internal	chr11	71586020	71590077	+	coding	KRTAP5-11	protein_coding	ANTISENSE	ENSG00000204571	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_11q13.4b	HERV	HERVE	internal	chr11	71611583	71615633	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UNC93B6	ENSG00000255562	3543	OR7E4P	ENSG00000255261	4387	None	None
ERVLB4_11q13.4a	HERV	ERVLB4	internal	chr11	71637166	71637769	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000867.4	ENSG00000284625	1782	AP000867.3	ENSG00000255415	7745	None	None
HERVS71_11q13.4	HERV	HERVS71	prototype	chr11	71705986	71713426	+	coding	AP003498.1,ENPP7P8	lncRNA,transcribed_unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000248671,ENSG00000255319	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_11q13.4a	HERV	HERVH	oneside	chr11	71737575	71741114	+	noncoding	AP003498.1,ENPP7P8	lncRNA,transcribed_unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000248671,ENSG00000255319	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVE_11q13.4c	HERV	HERVE	oneside	chr11	71741115	71749426	+	noncoding	AP003498.1,ENPP7P8,AP003498.3	lncRNA,transcribed_unprocessed_pseudogene,lncRNA	ANTISENSE,SENSE,SENSE	ENSG00000248671,ENSG00000255319,ENSG00000285933	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_11q13.4b	HERV	HERVH	oneside	chr11	71749427	71752695	+	noncoding	AP003498.1,ENPP7P8	lncRNA,transcribed_unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000248671,ENSG00000255319	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_11q13.4d	HERV	HERVE	internal	chr11	71886034	71890084	+	noncoding	AP002495.1	protein_coding	ANTISENSE	ENSG00000254469	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:71887079-71887445	chr11:71887409-71887445,chr11:71888048-71888077,chr11:71887128-71887130
HERVE_11q13.4e	HERV	HERVE	internal	chr11	71908491	71912322	+	noncoding	AP002495.1	protein_coding	ANTISENSE	ENSG00000254469	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr11:71909832-71909853,chr11:71909887-71909902,chr11:71910496-71910536,chr11:71909780-71909801
LTR25_11q13.4	HERV	LTR25	internal	chr11	72125101	72128542	-	noncoding	FOLR3	protein_coding	ANTISENSE	ENSG00000110203	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_11q13.4	HERV	PABLA	internal	chr11	72148055	72155376	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000812.3	ENSG00000256518	3446	FOLR3	ENSG00000110203	8163	None	None
MER41_11q13.4	HERV	MER41	internal	chr11	72149027	72149910	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FOLR3	ENSG00000110203	9135	AP000812.3	ENSG00000256518	8912	None	None
MER61_11q13.4	HERV	MER61	oneside	chr11	72162843	72167448	-	noncoding	AP000812.1	lncRNA	SENSE	ENSG00000204971	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr11:72162992-72163157	None
ERVLE_11q13.4c	HERV	ERVLE	internal	chr11	72257612	72260778	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000593.2	ENSG00000228286	6324	AP000593.4	ENSG00000285864	953	None	None
ERVLE_11q13.4d	HERV	ERVLE	internal	chr11	72453003	72455444	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CLPB	ENSG00000162129	18323	ART2BP	ENSG00000237408	22777	None	None
ERVLE_11q13.4e	HERV	ERVLE	internal	chr11	72455767	72457076	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ART2BP	ENSG00000237408	21145	CLPB	ENSG00000162129	21087	None	None
ERV316A3_11q13.4a	HERV	ERV316A3	internal	chr11	72458383	72458774	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CLPB	ENSG00000162129	23703	ART2BP	ENSG00000237408	19447	None	None
ERVLE_11q13.4f	HERV	ERVLE	internal	chr11	72474767	72476942	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CLPB	ENSG00000162129	40087	ART2BP	ENSG00000237408	1279	None	None
ERV316A3_11q13.4b	HERV	ERV316A3	internal	chr11	72541686	72545232	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005019.3	ENSG00000276109	5817	ART2P	ENSG00000238048	19953	None	None
ERVLB4_11q13.4b	HERV	ERVLB4	oneside	chr11	73618480	73620962	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM168A	ENSG00000054965	20291	AP000860.1	ENSG00000270323	19517	None	None
HML1_11q13.4	HERV	HML1	prototype	chr11	73938890	73947474	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DNAJB13	ENSG00000187726	2845	PAAF1	ENSG00000175575	7766	None	None
HERVL18_11q13.4	HERV	HERVL18	prototype	chr11	74540370	74544495	+	noncoding	POLD3	protein_coding	SENSE	ENSG00000077514	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_11q13.4	HERV	HUERSP3	oneside	chr11	74869317	74877162	+	noncoding	XRRA1,AP001992.1	protein_coding,transcribed_processed_pseudogene	ANTISENSE,SENSE	ENSG00000166435,ENSG00000241170	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11q13.4g	HERV	ERVLE	internal	chr11	74912656	74918274	+	noncoding	XRRA1,AP001992.1	protein_coding,transcribed_processed_pseudogene	ANTISENSE,SENSE	ENSG00000166435,ENSG00000241170	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_11q13.4b	HERV	HERVL40	oneside	chr11	74980696	74981724	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPCS2	ENSG00000118363	1663	NEU3	ENSG00000162139	6555	None	None
HARLEQUIN_11q13.4	HERV	HARLEQUIN	prototype	chr11	75039924	75047147	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NEU3	ENSG00000162139	21031	AP003175.1	ENSG00000284722	22096	None	chr11:75040476-75040487
ERVLE_11q13.4h	HERV	ERVLE	internal	chr11	75076045	75077842	-	noncoding	AP003175.1	lncRNA	SENSE	ENSG00000284722	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr11:75077408-75077616	chr11:75077408-75077417
ERVLE_11q13.5a	HERV	ERVLE	internal	chr11	75577926	75580506	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERPINH1	ENSG00000149257	5143	AP001922.5	ENSG00000255326	2690	None	None
HERVL74_11q13.5a	HERV	HERVL74	internal	chr11	75711156	75713343	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAP6	ENSG00000171533	42036	MOGAT2	ENSG00000166391	4495	None	None
HERVL74_11q13.5b	HERV	HERVL74	internal	chr11	76262192	76263588	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02761	ENSG00000255362	46167	THAP12	ENSG00000137492	86368	None	None
ERVLE_11q13.5b	HERV	ERVLE	internal	chr11	76416120	76417256	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GVQW3	ENSG00000179240	1501	AP002360.2	ENSG00000255135	18303	None	None
ERVLE_11q13.5c	HERV	ERVLE	internal	chr11	76725656	76729039	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003119.1	ENSG00000254632	30877	GUCY2EP	ENSG00000204529	5855	None	None
HERVL74_11q13.5c	HERV	HERVL74	internal	chr11	77032785	77034107	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ACER3	ENSG00000078124	5988	B3GNT6	ENSG00000198488	291	None	None
ERVLE_11q13.5d	HERV	ERVLE	internal	chr11	77273500	77274153	+	noncoding	GDPD4	protein_coding	ANTISENSE	ENSG00000178795	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_11q14.1a	HERV	MER61	oneside	chr11	77519761	77522473	-	noncoding	CLNS1A	protein_coding	SENSE	ENSG00000074201	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_11q14.1a	HERV	HERVH	prototype	chr11	77550175	77555707	+	noncoding	CLNS1A	protein_coding	ANTISENSE	ENSG00000074201	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr11:77550506-77550513
HERV3_11q14.1	HERV	HERV3	insert*	chr11	77570922	77575997	+	noncoding	CLNS1A	protein_coding	ANTISENSE	ENSG00000074201	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr11:77571346-77571357
MER4_11q14.1	HERV	MER4	prototype	chr11	77576248	77585610	+	noncoding	CLNS1A	protein_coding	ANTISENSE	ENSG00000074201	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
MER41_11q14.1a	HERV	MER41	internal	chr11	77641221	77644245	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CLNS1A	ENSG00000074201	3427	RSF1	ENSG00000048649	15751	None	None
HERVW_11q14.1	HERV	HERVW	prototype	chr11	77858328	77863478	-	noncoding	AAMDC,AP002812.2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000087884,ENSG00000254459	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11q14.1a	HERV	ERVLE	internal	chr11	77998390	78000351	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003032.2	ENSG00000254829	15364	INTS4	ENSG00000149262	3719	None	None
HERVH_11q14.1b	HERV	HERVH	prototype	chr11	78080836	78087032	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFC2-KCTD14	ENSG00000259112	971	ALG8	ENSG00000159063	13904	chr11:78080659-78081282	chr11:78081194-78081195,chr11:78081255-78081282,chr11:78083413-78083429,chr11:78084627-78084643
ERVLB4_11q14.1	HERV	ERVLB4	oneside	chr11	78607893	78613676	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	COPS8P3	ENSG00000254697	25737	TENM4	ENSG00000149256	39153	None	None
HERVL_11q14.1a	HERV	HERVL	prototype	chr11	78618484	78624985	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	COPS8P3	ENSG00000254697	36328	TENM4	ENSG00000149256	27844	None	None
HERVL_11q14.1b	HERV	HERVL	oneside	chr11	79124203	79128887	+	noncoding	TENM4	protein_coding	ANTISENSE	ENSG00000149256	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:79124613-79124744	None
HERVL_11q14.1c	HERV	HERVL	oneside	chr11	79136202	79138339	+	noncoding	TENM4	protein_coding	ANTISENSE	ENSG00000149256	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_11q14.1	HERV	HML5	prototype	chr11	81032643	81040395	+	noncoding	AP003398.2	lncRNA	SENSE	ENSG00000285568	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_11q14.1c	HERV	HERVH	prototype	chr11	81122403	81127454	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003398.2	ENSG00000285568	82167	AP003464.1	ENSG00000287912	47747	None	None
HERVL_11q14.1d	HERV	HERVL	prototype	chr11	81170865	81172965	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003464.1	ENSG00000287912	2236	AP003398.2	ENSG00000285568	130629	None	None
HERVP71A_11q14.1	HERV	HERVP71A	prototype	chr11	81196760	81202566	+	noncoding	AP003464.1	lncRNA	SENSE	ENSG00000287912	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_11q14.1b	HERV	MER61	oneside	chr11	81276391	81278629	+	noncoding	AP003464.1	lncRNA	SENSE	ENSG00000287912	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_11q14.1b	HERV	MER41	prototype	chr11	81634182	81641058	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTND6P25	ENSG00000255316	77757	MIR4300HG	ENSG00000245832	180214	None	None
ERVLE_11q14.1b	HERV	ERVLE	internal	chr11	81708387	81710816	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTND6P25	ENSG00000255316	151962	MIR4300HG	ENSG00000245832	110456	None	None
HERVH_11q14.1d	HERV	HERVH	prototype	chr11	81806220	81812679	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTND6P25	ENSG00000255316	249795	MIR4300HG	ENSG00000245832	8593	None	None
HARLEQUIN_11q14.1	HERV	HARLEQUIN	prototype	chr11	81951192	81956834	+	noncoding	MIR4300HG	lncRNA	ANTISENSE	ENSG00000245832	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_11q14.1e	HERV	HERVH	prototype	chr11	82025408	82031014	+	noncoding	MIR4300HG	lncRNA	ANTISENSE	ENSG00000245832	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_11q14.1e	HERV	HERVL	internal	chr11	82178748	82183223	+	coding	MIR4300HG	lncRNA	ANTISENSE	ENSG00000245832	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11q14.1a	HERV	ERV316A3	oneside	chr11	82214944	82217221	-	noncoding	MIR4300HG	lncRNA	SENSE	ENSG00000245832	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11q14.1b	HERV	ERV316A3	oneside	chr11	82266965	82267901	+	noncoding	MIR4300HG	lncRNA	ANTISENSE	ENSG00000245832	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_11q14.1	HERV	HERV9	oneside	chr11	82625682	82629395	+	noncoding	MIR4300HG,AP000793.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000245832,ENSG00000255246	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_11q14.1	HERV	HUERSP3B	prototype	chr11	82675713	82683502	-	noncoding	MIR4300HG	lncRNA	SENSE	ENSG00000245832	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV30_11q14.1	HERV	HERV30	prototype	chr11	83216719	83220622	-	noncoding	ANKRD42	protein_coding	ANTISENSE	ENSG00000137494	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_11q14.1f	HERV	HERVH	prototype	chr11	83341985	83345578	-	noncoding	AP000446.1	lncRNA	ANTISENSE	ENSG00000255234	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_11q14.1g	HERV	HERVH	prototype	chr11	83419135	83423556	+	noncoding	AP000446.1	lncRNA	SENSE	ENSG00000255234	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_11q14.1h	HERV	HERVH	prototype	chr11	83430603	83436575	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DLG2	ENSG00000150672	18437	AP000446.1	ENSG00000255234	7087	None	None
HERVH_11q14.1i	HERV	HERVH	prototype	chr11	83442184	83448545	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DLG2	ENSG00000150672	6467	AP000446.1	ENSG00000255234	18668	None	None
HERVL_11q14.1f	HERV	HERVL	prototype	chr11	83503292	83508193	-	noncoding	DLG2	protein_coding	SENSE	ENSG00000150672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_11q14.1	HERV	HERVL40	oneside	chr11	85155046	85156791	+	noncoding	DLG2	protein_coding	ANTISENSE	ENSG00000150672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_11q14.1g	HERV	HERVL	prototype	chr11	85156889	85163278	+	coding	DLG2	protein_coding	ANTISENSE	ENSG00000150672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_11q14.1c	HERV	MER61	prototype	chr11	85368772	85373842	+	noncoding	DLG2	protein_coding	ANTISENSE	ENSG00000150672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_11q14.2a	HERV	HERVL18	oneside	chr11	85940994	85945741	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC25A1P1	ENSG00000254479	5331	PICALM	ENSG00000073921	11434	None	None
ERVLE_11q14.2a	HERV	ERVLE	internal	chr11	86450540	86453375	+	noncoding	AP001831.1,ME3	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000254733,ENSG00000151376	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_11q14.2	HERV	HERVW	oneside	chr11	86833496	86836818	-	noncoding	PRSS23,AP000654.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000150687,ENSG00000269895	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV30_11q14.2	HERV	HERV30	prototype	chr11	86845542	86851050	+	noncoding	PRSS23	protein_coding	SENSE	ENSG00000150687	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_11q14.2	HERV	MER61	internal	chr11	87086913	87088907	-	noncoding	TMEM135	protein_coding	ANTISENSE	ENSG00000166575	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_11q14.2b	HERV	HERVL18	oneside	chr11	87359416	87362995	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSMA2P1	ENSG00000254582	29364	AP003497.1	ENSG00000255391	117741	None	chr11:87359639-87359650,chr11:87359721-87359736,chr11:87359747-87359758,chr11:87359760-87359763,chr11:87359765-87359782,chr11:87359793-87359811
ERVLE_11q14.2b	HERV	ERVLE	internal	chr11	87780143	87781003	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCYBP41	ENSG00000254650	34032	AP000756.1	ENSG00000279341	58910	None	None
HERVH_11q14.2	HERV	HERVH	prototype	chr11	88043410	88049633	+	noncoding	AP000676.5	lncRNA	ANTISENSE	ENSG00000285835	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr11:88043431-88043531	None
ERVLE_11q14.2c	HERV	ERVLE	internal	chr11	88111100	88111577	-	noncoding	AP005436.3	lncRNA	ANTISENSE	ENSG00000255241	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_11q14.2c	HERV	HERVL18	prototype	chr11	88431622	88434850	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRM5-AS1	ENSG00000255082	69726	AP003120.1	ENSG00000288018	3446	None	None
ERV316A3_11q14.3a	HERV	ERV316A3	oneside	chr11	88699400	88701594	+	noncoding	GRM5	protein_coding	ANTISENSE	ENSG00000168959	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_11q14.3	HERV	HUERSP3B	prototype	chr11	88885695	88894481	+	noncoding	GRM5	protein_coding	ANTISENSE	ENSG00000168959	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_11q14.3	HERV	HERVH	prototype	chr11	89381304	89387559	+	noncoding	NOX4	protein_coding	ANTISENSE	ENSG00000086991	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:89381194-89381565	chr11:89381559-89381562
ERVLE_11q14.3a	HERV	ERVLE	internal	chr11	90123780	90124878	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000648.1	ENSG00000207299	5319	AP000648.3	ENSG00000279299	780	None	None
ERVLE_11q14.3b	HERV	ERVLE	internal	chr11	90412237	90412696	+	noncoding	DISC1FP1	lncRNA	SENSE	ENSG00000261645	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11q14.3c	HERV	ERVLE	internal	chr11	90437498	90441294	+	noncoding	DISC1FP1	lncRNA	SENSE	ENSG00000261645	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11q14.3b	HERV	ERV316A3	internal	chr11	90486509	90487266	-	noncoding	DISC1FP1	lncRNA	ANTISENSE	ENSG00000261645	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11q14.3d	HERV	ERVLE	internal	chr11	90702582	90705170	-	noncoding	DISC1FP1	lncRNA	ANTISENSE	ENSG00000261645	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11q14.3c	HERV	ERV316A3	oneside	chr11	90705166	90707164	-	noncoding	DISC1FP1	lncRNA	ANTISENSE	ENSG00000261645	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11q14.3d	HERV	ERV316A3	internal	chr11	90833165	90835136	+	noncoding	DISC1FP1	lncRNA	SENSE	ENSG00000261645	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_11q14.3a	HERV	ERVLB4	internal	chr11	90900181	90902333	-	noncoding	DISC1FP1	lncRNA	ANTISENSE	ENSG00000261645	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_11q14.3	HERV	HUERSP2	prototype	chr11	90928569	90931530	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DISC1FP1	ENSG00000261645	13517	AP001002.3	ENSG00000280085	40786	None	None
HERVL_11q14.3a	HERV	HERVL	prototype	chr11	91596669	91603352	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002791.1	ENSG00000280093	213380	LINC02756	ENSG00000255332	190967	None	None
ERVLE_11q14.3e	HERV	ERVLE	internal	chr11	91743810	91745065	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02756	ENSG00000255332	49254	AP002791.1	ENSG00000280093	360521	chr11:91744148-91744314	None
ERVLE_11q14.3f	HERV	ERVLE	internal	chr11	91934813	91935533	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02756	ENSG00000255332	62727	TUBB4BP4	ENSG00000254961	14198	None	None
ERVLB4_11q14.3b	HERV	ERVLB4	internal	chr11	92037106	92037806	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7AP57	ENSG00000242248	123300	AP002799.1	ENSG00000278859	43851	None	None
ERV316A3_11q14.3e	HERV	ERV316A3	internal	chr11	92133536	92134748	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7AP57	ENSG00000242248	26358	AP002799.1	ENSG00000278859	140281	None	None
HERVK11D_11q14.3	HERV	HERVK11D	prototype	chr11	92943569	92950131	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP003171.1	ENSG00000254874	15666	SNRPGP16	ENSG00000255287	5903	None	None
HERVL_11q14.3b	HERV	HERVL	oneside	chr11	92986258	92987642	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL26P31	ENSG00000242807	64753	MTNR1B	ENSG00000134640	1192	None	None
HARLEQUIN_11q21	HERV	HARLEQUIN	prototype	chr11	93103524	93110857	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003072.4	ENSG00000279304	22998	AP002371.1	ENSG00000278892	31493	None	None
ERVLE_11q21a	HERV	ERVLE	internal	chr11	93251476	93252134	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003969.1	ENSG00000255233	10308	AP003969.2	ENSG00000279684	34495	None	None
HERVIP10F_11q21	HERV	HERVIP10F	prototype	chr11	93260775	93269148	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003969.1	ENSG00000255233	19607	AP003969.2	ENSG00000279684	17481	None	None
HERVIP10FH_11q21	HERV	HERVIP10FH	internal	chr11	93264538	93265564	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003969.1	ENSG00000255233	23370	AP003969.2	ENSG00000279684	21065	None	None
ERVLB4_11q21a	HERV	ERVLB4	internal	chr11	93291720	93292795	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003969.2	ENSG00000279684	2817	DEUP1	ENSG00000165325	37176	None	None
ERV316A3_11q21a	HERV	ERV316A3	oneside	chr11	93433662	93436650	-	noncoding	DEUP1	protein_coding	ANTISENSE	ENSG00000165325	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_11q21b	HERV	ERVLB4	oneside	chr11	93606121	93609488	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003499.2	ENSG00000255515	272	AP003499.5	ENSG00000278953	13452	None	None
MER4_11q21f	HERV	MER4	largegap*	chr11	93853038	93857260	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002795.1	ENSG00000255995	134086	VSTM5	ENSG00000214376	2420	None	None
MER4_11q21a	HERV	MER4	prototype	chr11	93858762	93861195	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VSTM5	ENSG00000214376	8144	AP002795.1	ENSG00000255995	130151	None	None
HERVH48_11q21	HERV	HERVH48	prototype	chr11	93861745	93870225	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP002795.1	ENSG00000255995	121121	VSTM5	ENSG00000214376	11127	None	None
MER4_11q21b	HERV	MER4	oneside	chr11	93871926	93875851	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002795.1	ENSG00000255995	115495	VSTM5	ENSG00000214376	21308	None	None
MER4_11q21c	HERV	MER4	oneside	chr11	93876095	93879237	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002795.1	ENSG00000255995	112109	VSTM5	ENSG00000214376	25477	None	None
HERV9_11q21	HERV	HERV9	prototype	chr11	94118244	94125844	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HEPHL1	ENSG00000181333	4036	PANX1	ENSG00000110218	2997	None	None
HERVH_11q21e	HERV	HERVH	tandem*	chr11	94345725	94355534	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IZUMO1R	ENSG00000183560	38004	GPR83	ENSG00000123901	21782	None	None
HERVH_11q21a	HERV	HERVH	prototype	chr11	94641601	94647311	+	noncoding	AP000943.2,LINC02700	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000255929,ENSG00000255666	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV4_11q21	HERV	HERV4	prototype	chr11	94650011	94657535	+	coding	AP000943.2,LINC02700	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000255929,ENSG00000255666	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr11:94649998-94650360	chr11:94650344-94650360,chr11:94650427-94650448
MER4_11q21d	HERV	MER4	oneside	chr11	94809643	94812759	-	noncoding	AMOTL1	protein_coding	ANTISENSE	ENSG00000166025	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_11q21e	HERV	MER4	oneside	chr11	94815022	94819826	+	noncoding	AMOTL1	protein_coding	SENSE	ENSG00000166025	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_11q21	HERV	LTR57	internal	chr11	94815044	94815585	+	noncoding	AMOTL1	protein_coding	SENSE	ENSG00000166025	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_11q21	HERV	MER34B	internal	chr11	95003912	95005348	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002383.1	ENSG00000255653	6510	KDM4D	ENSG00000186280	4393	None	None
HERVH_11q21b	HERV	HERVH	prototype	chr11	95019384	95025062	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KDM4E	ENSG00000235268	196	AP002383.1	ENSG00000255653	6852	None	None
ERVLE_11q21b	HERV	ERVLE	internal	chr11	95072790	95073368	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ENDOD1	ENSG00000149218	16478	SRSF8	ENSG00000263465	1566	None	None
HERVH_11q21c	HERV	HERVH	prototype	chr11	95309419	95317803	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000787.1	ENSG00000245552	75028	AP001790.1	ENSG00000250390	164603	None	None
ERV316A3_11q21b	HERV	ERV316A3	oneside	chr11	95385835	95386679	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001790.1	ENSG00000250390	95727	AP000787.1	ENSG00000245552	151444	None	None
ERV316A3_11q21c	HERV	ERV316A3	oneside	chr11	95542977	95547367	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000820.2	ENSG00000285842	23673	AP001790.1	ENSG00000250390	45424	None	None
MER41_11q21	HERV	MER41	internal	chr11	95613458	95614534	-	noncoding	AP000820.2	lncRNA	ANTISENSE	ENSG00000285842	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_11q21	HERV	HML5	oneside	chr11	95933550	95940248	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTMR2	ENSG00000087053	8235	AP000870.1	ENSG00000242993	22971	None	None
ERVLE_11q21c	HERV	ERVLE	internal	chr11	95943046	95947278	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000870.1	ENSG00000242993	15941	MTMR2	ENSG00000087053	17731	None	None
LTR46_11q21	HERV	LTR46	prototype	chr11	96498781	96507527	+	noncoding	JRKL,JRKL-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000183340,ENSG00000255679	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr11:96506916-96506928
HERVH_11q21d	HERV	HERVH	prototype	chr11	96587635	96593674	+	noncoding	AP003066.1	lncRNA	SENSE	ENSG00000254587	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11q21d	HERV	ERVLE	internal	chr11	96615896	96618213	-	noncoding	AP003066.1	lncRNA	ANTISENSE	ENSG00000254587	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_11q21	HERV	PRIMA4	internal	chr11	96629756	96632028	-	noncoding	AP003066.1	lncRNA	ANTISENSE	ENSG00000254587	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_11q21c	HERV	ERVLB4	internal	chr11	96697533	96700987	-	noncoding	AP003066.1	lncRNA	ANTISENSE	ENSG00000254587	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11q21d	HERV	ERV316A3	oneside	chr11	96870233	96871968	+	noncoding	AP003066.1	lncRNA	SENSE	ENSG00000254587	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_11q21d	HERV	ERVLB4	prototype	chr11	96987260	96994711	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP003066.1	ENSG00000254587	1450	MED28P5	ENSG00000255205	5563	None	None
ERVLE_11q21e	HERV	ERVLE	internal	chr11	97004699	97007304	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001836.1	ENSG00000270753	78856	MED28P5	ENSG00000255205	3988	None	None
ERV316A3_11q21e	HERV	ERV316A3	oneside	chr11	97208468	97209757	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02553	ENSG00000255039	12887	AP001836.1	ENSG00000270753	121786	None	None
ERVLE_11q21f	HERV	ERVLE	internal	chr11	97236883	97239036	+	noncoding	LINC02553	lncRNA	ANTISENSE	ENSG00000255039	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_11q21e	HERV	ERVLB4	internal	chr11	97250064	97252894	+	noncoding	LINC02553	lncRNA	ANTISENSE	ENSG00000255039	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_11q21f	HERV	ERVLB4	internal	chr11	97306948	97308761	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP347	ENSG00000199315	348703	LINC02553	ENSG00000255039	46961	None	None
ERVLB4_11q21g	HERV	ERVLB4	internal	chr11	97308927	97309569	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP347	ENSG00000199315	347895	LINC02553	ENSG00000255039	48940	None	None
HERVL_11q21	HERV	HERVL	prototype	chr11	97317542	97323414	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02553	ENSG00000255039	57555	RNA5SP347	ENSG00000199315	334050	None	None
ERVLE_11q21g	HERV	ERVLE	internal	chr11	97386801	97392341	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP347	ENSG00000199315	265123	LINC02553	ENSG00000255039	126814	None	None
MER4B_11q22.1	HERV	MER4B	oneside	chr11	97518547	97522407	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP347	ENSG00000199315	135057	LINC02553	ENSG00000255039	258560	None	None
HUERSP2_11q22.1a	HERV	HUERSP2	prototype	chr11	97608739	97611776	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP347	ENSG00000199315	45688	LINC02553	ENSG00000255039	348752	None	None
ERVLE_11q22.1a	HERV	ERVLE	internal	chr11	97626666	97627460	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02553	ENSG00000255039	366679	RNA5SP347	ENSG00000199315	30004	None	None
HERVL40_11q22.1	HERV	HERVL40	internal	chr11	97774433	97775759	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP347	ENSG00000199315	116851	LINC02713	ENSG00000255502	102716	None	None
HERVL_11q22.1	HERV	HERVL	oneside	chr11	97788606	97790771	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02713	ENSG00000255502	87704	RNA5SP347	ENSG00000199315	131024	None	None
ERVLE_11q22.1b	HERV	ERVLE	internal	chr11	97882221	97883751	-	noncoding	LINC02713	lncRNA	SENSE	ENSG00000255502	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_11q22.1a	HERV	HERV9	internal	chr11	97964135	97965160	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001317.1	ENSG00000255380	165079	LINC02713	ENSG00000255502	4577	None	None
HUERSP3_11q22.1	HERV	HUERSP3	internal	chr11	97965942	97973210	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001317.1	ENSG00000255380	157029	LINC02713	ENSG00000255502	6384	chr11:97966023-97966476	None
ERV316A3_11q22.1a	HERV	ERV316A3	internal	chr11	98043589	98045094	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001317.1	ENSG00000255380	85145	LINC02713	ENSG00000255502	84031	None	None
ERV316A3_11q22.1b	HERV	ERV316A3	prototype	chr11	98045719	98048420	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001317.1	ENSG00000255380	81819	LINC02713	ENSG00000255502	86161	None	None
MER61_11q22.1a	HERV	MER61	oneside	chr11	98064677	98070173	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001317.1	ENSG00000255380	60066	LINC02713	ENSG00000255502	105119	chr11:98069921-98070099	None
HUERSP2_11q22.1b	HERV	HUERSP2	internal	chr11	98383429	98384106	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001317.1	ENSG00000255380	252231	AP003038.1	ENSG00000254939	180968	None	None
HERVIP10F_11q22.1	HERV	HERVIP10F	oneside	chr11	98394353	98395791	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003038.1	ENSG00000254939	169283	AP001317.1	ENSG00000255380	263155	None	None
HARLEQUIN_11q22.1a	HERV	HARLEQUIN	internal	chr11	98396259	98397522	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003038.1	ENSG00000254939	167552	AP001317.1	ENSG00000255380	265061	None	None
HUERSP2_11q22.1c	HERV	HUERSP2	prototype	chr11	98453083	98457221	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003038.1	ENSG00000254939	107853	AP001317.1	ENSG00000255380	321885	chr11:98454039-98454195	None
MER61_11q22.1b	HERV	MER61	prototype	chr11	98758549	98765618	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP003715.1	ENSG00000254599	74814	AP002428.1	ENSG00000254830	173294	None	None
ERV316A3_11q22.1c	HERV	ERV316A3	internal	chr11	98825839	98827747	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003715.1	ENSG00000254599	142104	AP002428.1	ENSG00000254830	111165	None	None
ERVLB4_11q22.1a	HERV	ERVLB4	oneside	chr11	98876229	98882025	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002428.1	ENSG00000254830	56887	AP003715.1	ENSG00000254599	192494	None	None
HML5_11q22.1	HERV	HML5	prototype	chr11	98928947	98933825	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002428.1	ENSG00000254830	5087	AP003715.1	ENSG00000254599	245212	None	None
HERVL66_11q22.1	HERV	HERVL66	oneside	chr11	99180055	99182182	-	noncoding	CNTN5	protein_coding	ANTISENSE	ENSG00000149972	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_11q22.1a	HERV	MER41	internal	chr11	99296637	99297521	-	noncoding	CNTN5	protein_coding	ANTISENSE	ENSG00000149972	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11q22.1d	HERV	ERV316A3	internal	chr11	99321460	99322004	-	noncoding	CNTN5	protein_coding	ANTISENSE	ENSG00000149972	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_11q22.1a	HERV	MER4	internal	chr11	99425918	99430578	-	noncoding	CNTN5	protein_coding	ANTISENSE	ENSG00000149972	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_11q22.1b	HERV	MER4	oneside	chr11	99430674	99432197	-	noncoding	CNTN5	protein_coding	ANTISENSE	ENSG00000149972	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:99432118-99432369	None
ERVLB4_11q22.1b	HERV	ERVLB4	internal	chr11	99491407	99492375	-	noncoding	CNTN5	protein_coding	ANTISENSE	ENSG00000149972	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11q22.1e	HERV	ERV316A3	prototype	chr11	100515057	100520900	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CNTN5	ENSG00000149972	156172	RN7SL222P	ENSG00000242165	121075	None	None
HERVIP10FH_11q22.1a	HERV	HERVIP10FH	oneside	chr11	100744779	100749391	-	noncoding	ARHGAP42	protein_coding	ANTISENSE	ENSG00000165895	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_11q22.1b	HERV	MER41	oneside	chr11	101140207	101142841	-	noncoding	PGR-AS1	lncRNA	ANTISENSE	ENSG00000282728	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11q22.1f	HERV	ERV316A3	oneside	chr11	101179954	101182853	+	noncoding	PGR-AS1	lncRNA	SENSE	ENSG00000282728	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11q22.1c	HERV	ERVLE	internal	chr11	101182982	101183665	+	noncoding	PGR-AS1	lncRNA	SENSE	ENSG00000282728	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11_11q22.1a	HERV	HERVK11	oneside	chr11	101211205	101216672	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRPC6	ENSG00000137672	234892	PGR-AS1	ENSG00000282728	1614	None	None
HERVK11_11q22.1b	HERV	HERVK11	oneside	chr11	101216739	101221382	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TRPC6	ENSG00000137672	230182	PGR-AS1	ENSG00000282728	7148	None	None
HERV9_11q22.1b	HERV	HERV9	prototype	chr11	101230104	101241805	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRPC6	ENSG00000137672	209759	PGR-AS1	ENSG00000282728	20513	None	None
HARLEQUIN_11q22.1b	HERV	HARLEQUIN	prototype	chr11	101244310	101252307	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGR-AS1	ENSG00000282728	34719	TRPC6	ENSG00000137672	199257	None	None
HERVIP10FH_11q22.1b	HERV	HERVIP10FH	internal	chr11	101245150	101247443	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PGR-AS1	ENSG00000282728	35559	TRPC6	ENSG00000137672	204121	None	None
ERV316A3_11q22.1g	HERV	ERV316A3	prototype	chr11	101272337	101274875	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGR-AS1	ENSG00000282728	62746	TRPC6	ENSG00000137672	176689	None	None
HML2_11q22.1	HERV	HML2	prototype	chr11	101695063	101704528	+	coding	TRPC6	protein_coding	ANTISENSE	ENSG00000137672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11q22.1h	HERV	ERV316A3	prototype	chr11	101797179	101798452	-	noncoding	TRPC6	protein_coding	SENSE	ENSG00000137672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11q22.1i	HERV	ERV316A3	oneside	chr11	101839149	101844136	-	noncoding	TRPC6	protein_coding	SENSE	ENSG00000137672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11q22.1j	HERV	ERV316A3	internal	chr11	101851282	101852479	-	noncoding	TRPC6	protein_coding	SENSE	ENSG00000137672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11q22.1k	HERV	ERV316A3	oneside	chr11	101858637	101860946	-	noncoding	TRPC6	protein_coding	SENSE	ENSG00000137672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11q22.1l	HERV	ERV316A3	prototype	chr11	102012288	102014937	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CEP126	ENSG00000110318	11226	CFAP300	ENSG00000137691	32500	None	None
ERVLE_11q22.1d	HERV	ERVLE	internal	chr11	102256361	102260465	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000942.1	ENSG00000243777	34595	YAP1	ENSG00000137693	22937	None	None
ERV316A3_11q22.1m	HERV	ERV316A3	internal	chr11	102273455	102275863	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000942.1	ENSG00000243777	19197	YAP1	ENSG00000137693	40031	None	None
ERV316A3_11q22.2	HERV	ERV316A3	internal	chr11	102545302	102545908	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MMP20	ENSG00000137674	30924	MMP7	ENSG00000137673	14552	None	None
ERVLB4_11q22.2	HERV	ERVLB4	internal	chr11	102786635	102788456	-	noncoding	WTAPP1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000255282	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_11q22.2	HERV	HERVH	prototype	chr11	102904000	102909908	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MMP13	ENSG00000137745	33087	RNU7-159P	ENSG00000238562	47	None	None
HERVL18_11q22.3	HERV	HERVL18	oneside	chr11	103541164	103545211	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002989.1	ENSG00000254987	130783	DYNC2H1	ENSG00000187240	61301	None	None
HARLEQUIN_11q22.3	HERV	HARLEQUIN	prototype	chr11	103572042	103579117	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DYNC2H1	ENSG00000187240	92179	AP002989.1	ENSG00000254987	96877	None	None
ERVLE_11q22.3a	HERV	ERVLE	internal	chr11	103865276	103869812	-	noncoding	AP002989.1	lncRNA	SENSE	ENSG00000254987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_11q22.3a	HERV	HUERSP1	prototype	chr11	104490194	104495021	+	noncoding	LINC02552	lncRNA	ANTISENSE	ENSG00000256422	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11q22.3b	HERV	ERVLE	internal	chr11	104529437	104531122	+	noncoding	LINC02552	lncRNA	ANTISENSE	ENSG00000256422	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11q22.3a	HERV	ERV316A3	oneside	chr11	104589091	104591278	+	noncoding	LINC02552	lncRNA	ANTISENSE	ENSG00000256422	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr11:104589185-104589187
ERV316A3_11q22.3b	HERV	ERV316A3	internal	chr11	104658554	104660145	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02552	ENSG00000256422	49056	AP001485.1	ENSG00000270449	22238	None	None
HERVFH19_11q22.3	HERV	HERVFH19	oneside	chr11	104739963	104743520	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002004.1	ENSG00000254569	129744	AP001485.1	ENSG00000270449	57382	None	None
HERVL40_11q22.3a	HERV	HERVL40	internal	chr11	104817180	104818421	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002004.1	ENSG00000254569	54843	AP001485.1	ENSG00000270449	134599	None	None
HUERSP1_11q22.3b	HERV	HUERSP1	prototype	chr11	104961004	104966216	+	noncoding	CASP4	protein_coding	ANTISENSE	ENSG00000196954	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_11q22.3a	HERV	MER4B	oneside	chr11	104972403	104975175	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001153.1	ENSG00000284715	181	CASP4	ENSG00000196954	3037	None	None
HUERSP1_11q22.3c	HERV	HUERSP1	oneside	chr11	105074657	105077688	+	noncoding	CARD16	protein_coding	ANTISENSE	ENSG00000204397	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_11q22.3d	HERV	HUERSP1	oneside	chr11	105104082	105107758	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CARD17	ENSG00000255221	2651	CASP1P1	ENSG00000255430	14903	None	None
ERV316A3_11q22.3c	HERV	ERV316A3	internal	chr11	105207831	105208972	-	noncoding	CARD18	protein_coding	SENSE	ENSG00000255501	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:105208088-105208344	chr11:105208308-105208332,chr11:105208333-105208344
ERVLE_11q22.3c	HERV	ERVLE	internal	chr11	105328338	105330740	+	noncoding	CARD18	protein_coding	ANTISENSE	ENSG00000255501	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_11q22.3a	HERV	ERVLB4	oneside	chr11	105346890	105347856	+	noncoding	CARD18	protein_coding	ANTISENSE	ENSG00000255501	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_11q22.3b	HERV	ERVLB4	oneside	chr11	105679012	105680618	-	noncoding	GRIA4	protein_coding	ANTISENSE	ENSG00000152578	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_11q22.3b	HERV	HERVL40	oneside	chr11	105824822	105827156	-	noncoding	GRIA4	protein_coding	ANTISENSE	ENSG00000152578	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11q22.3d	HERV	ERVLE	internal	chr11	106102270	106105246	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001001.1	ENSG00000254433	295	AP001001.2	ENSG00000287846	1152	None	None
HERVL_11q22.3a	HERV	HERVL	oneside	chr11	106114832	106118062	+	noncoding	LINC02719	lncRNA	ANTISENSE	ENSG00000254580	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_11q22.3a	HERV	MER41	internal	chr11	106179278	106179786	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02719	ENSG00000254580	47162	AP002001.3	ENSG00000286345	62188	None	None
PABLA_11q22.3	HERV	PABLA	internal	chr11	106186959	106188762	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02719	ENSG00000254580	54843	AP002001.3	ENSG00000286345	53212	None	None
ERVLE_11q22.3e	HERV	ERVLE	internal	chr11	106197181	106199766	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002001.3	ENSG00000286345	42208	LINC02719	ENSG00000254580	65065	None	None
ERV316A3_11q22.3d	HERV	ERV316A3	internal	chr11	106207739	106209637	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002001.3	ENSG00000286345	32337	LINC02719	ENSG00000254580	75623	None	None
HERVI_11q22.3	HERV	HERVI	prototype	chr11	106222427	106230586	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02719	ENSG00000254580	90311	AP002001.3	ENSG00000286345	11388	None	None
ERVL_11q22.3	HERV	ERVL	oneside	chr11	106271690	106273238	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002001.1	ENSG00000254811	6785	AP002001.2	ENSG00000255065	36807	None	None
PRIMA41_11q22.3	HERV	PRIMA41	internal	chr11	106299423	106302265	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002001.2	ENSG00000255065	7780	AP002001.1	ENSG00000254811	34518	chr11:106299556-106299897	None
HERVL_11q22.3b	HERV	HERVL	prototype	chr11	106829530	106830803	+	noncoding	GUCY1A2	protein_coding	ANTISENSE	ENSG00000152402	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_11q22.3c	HERV	HERVL	prototype	chr11	107231914	107238231	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000766.1	ENSG00000261098	73901	AP003057.1	ENSG00000255353	54384	None	None
MER4B_11q22.3b	HERV	MER4B	internal	chr11	107250831	107254269	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000766.1	ENSG00000261098	57863	AP003057.1	ENSG00000255353	73301	None	chr11:107252768-107252771
MER41_11q22.3b	HERV	MER41	internal	chr11	107255430	107256635	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000766.1	ENSG00000261098	55497	AP003057.1	ENSG00000255353	77900	None	None
ERVLE_11q22.3f	HERV	ERVLE	internal	chr11	107358898	107359975	+	noncoding	CWF19L2	protein_coding	ANTISENSE	ENSG00000152404	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_11q22.3c	HERV	ERVLB4	internal	chr11	107490869	107491959	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ALKBH8	ENSG00000137760	10767	CWF19L2	ENSG00000152404	33025	None	None
ERVLB4_11q22.3d	HERV	ERVLB4	internal	chr11	107953496	107954632	-	noncoding	RAB39A	protein_coding	ANTISENSE	ENSG00000179331	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11q22.3g	HERV	ERVLE	internal	chr11	107954623	107956036	-	noncoding	RAB39A	protein_coding	ANTISENSE	ENSG00000179331	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11q22.3h	HERV	ERVLE	internal	chr11	107973286	107974465	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003307.2	ENSG00000288012	34213	RAB39A	ENSG00000179331	9804	None	None
HERVL_11q22.3d	HERV	HERVL	prototype	chr11	107977838	107986311	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAB39A	ENSG00000179331	14356	AP003307.2	ENSG00000288012	22367	None	None
HERVW_11q22.3	HERV	HERVW	oneside	chr11	107981085	107983117	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003307.2	ENSG00000288012	25561	RAB39A	ENSG00000179331	17603	None	None
ERVLE_11q22.3i	HERV	ERVLE	internal	chr11	108379990	108381428	+	noncoding	C11orf65	protein_coding	ANTISENSE	ENSG00000166323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11q22.3j	HERV	ERVLE	internal	chr11	108398625	108402412	-	noncoding	C11orf65	protein_coding	SENSE	ENSG00000166323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11q22.3k	HERV	ERVLE	internal	chr11	108433801	108436597	+	noncoding	C11orf65	protein_coding	ANTISENSE	ENSG00000166323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_11q22.3e	HERV	HERVL	oneside	chr11	109287432	109288840	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP004146.1	ENSG00000264997	23868	AP003049.2	ENSG00000255028	66245	None	None
ERV316A3_11q22.3e	HERV	ERV316A3	oneside	chr11	109318778	109320892	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP004146.1	ENSG00000264997	55214	AP003049.2	ENSG00000255028	34193	None	None
HERVL_11q22.3f	HERV	HERVL	prototype	chr11	109495801	109503010	-	noncoding	AP003049.2	lncRNA	SENSE	ENSG00000255028	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_11q22.3g	HERV	HERVL	prototype	chr11	109961538	109968249	+	noncoding	RDX,AP001981.2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000137710,ENSG00000287245	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11q22.3l	HERV	ERVLE	internal	chr11	110331576	110332686	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RDX	ENSG00000137710	34864	LINC02732	ENSG00000254416	22444	None	None
HML3_11q22.3	HERV	HML3	oneside	chr11	110396219	110399788	+	noncoding	LINC02732	lncRNA	SENSE	ENSG00000254416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_11q22.3	HERV	HERV9	prototype	chr11	110399819	110407144	+	coding	LINC02732	lncRNA	SENSE	ENSG00000254416	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_11q22.3	HERV	PRIMA4	prototype	chr11	110417255	110427689	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02732	ENSG00000254416	9642	FDX1	ENSG00000137714	2259	None	None
ERV316A3_11q23.1a	HERV	ERV316A3	oneside	chr11	110737641	110740628	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA1P60	ENSG00000233497	47398	ARHGAP20	ENSG00000137727	24452	None	None
ERV316A3_11q23.1b	HERV	ERV316A3	internal	chr11	110740821	110742055	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA1P60	ENSG00000233497	45971	ARHGAP20	ENSG00000137727	27632	None	None
ERV316A3_11q23.1c	HERV	ERV316A3	internal	chr11	111037246	111038152	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP350	ENSG00000200168	1946	AP003973.4	ENSG00000287556	9610	None	None
ERVLE_11q23.1	HERV	ERVLE	internal	chr11	111038239	111038910	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003973.4	ENSG00000287556	10603	RNA5SP350	ENSG00000200168	1188	None	None
HERVH_11q23.1	HERV	HERVH	oneside	chr11	111052089	111056109	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP350	ENSG00000200168	11881	AP003973.2	ENSG00000271390	33761	None	None
ERV316A3_11q23.1d	HERV	ERV316A3	internal	chr11	111545120	111548379	-	noncoding	LAYN	protein_coding	ANTISENSE	ENSG00000204381	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11q23.2	HERV	ERV316A3	oneside	chr11	112774533	112776204	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003100.1	ENSG00000254626	11100	AP003100.2	ENSG00000285769	23402	None	None
HML6_11q23.2	HERV	HML6	prototype	chr11	112924628	112930083	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000802.1	ENSG00000247416	29196	AC016902.1	ENSG00000288070	89504	None	None
ERVLB4_11q23.2	HERV	ERVLB4	internal	chr11	113450524	113451146	+	noncoding	DRD2	protein_coding	ANTISENSE	ENSG00000149295	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_11q23.2	HERV	HERVL	prototype	chr11	113581951	113586158	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	DRD2	ENSG00000149295	106260	TMPRSS5	ENSG00000166682	101389	None	chr11:113582128-113582155
HERVW_11q23.2	HERV	HERVW	internal	chr11	114347204	114349692	-	noncoding	AP002518.2,AP002518.1	lncRNA,lncRNA	SENSE,SENSE	ENSG00000256947,ENSG00000256195	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_11q23.2	HERV	HUERSP3	oneside	chr11	114585663	114591921	+	coding	NXPE4	protein_coding	ANTISENSE	ENSG00000137634	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_11q23.3a	HERV	ERVLB4	oneside	chr11	114648240	114649258	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NXPE2	ENSG00000204361	29269	NXPE4	ENSG00000137634	52454	None	None
MER4_11q23.3	HERV	MER4	internal	chr11	114681656	114683299	-	noncoding	NXPE2	protein_coding	ANTISENSE	ENSG00000204361	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_11q23.3b	HERV	ERVLB4	internal	chr11	115842603	115847386	-	noncoding	LINC02698	lncRNA	ANTISENSE	ENSG00000256717	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11q23.3a	HERV	ERV316A3	oneside	chr11	116090954	116092659	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02151	ENSG00000236437	404240	AP000797.1	ENSG00000239600	139463	None	None
ERV316A3_11q23.3b	HERV	ERV316A3	internal	chr11	116092688	116094160	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02151	ENSG00000236437	402739	AP000797.1	ENSG00000239600	141197	None	None
HUERSP2_11q23.3	HERV	HUERSP2	prototype	chr11	116144373	116148397	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000797.1	ENSG00000239600	192882	LINC02151	ENSG00000236437	348502	None	None
ERVLB4_11q23.3c	HERV	ERVLB4	oneside	chr11	116290787	116295715	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000797.1	ENSG00000239600	339296	LINC02151	ENSG00000236437	201184	None	None
ERVLE_11q23.3a	HERV	ERVLE	internal	chr11	116295729	116302481	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000797.1	ENSG00000239600	344238	LINC02151	ENSG00000236437	194418	None	None
ERVLE_11q23.3b	HERV	ERVLE	internal	chr11	116303185	116304473	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000797.1	ENSG00000239600	351694	LINC02151	ENSG00000236437	192426	None	None
HERVH_11q23.3a	HERV	HERVH	oneside	chr11	117810114	117814332	+	noncoding	DSCAML1,FXYD2	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000177103,ENSG00000137731	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11q23.3c	HERV	ERV316A3	prototype	chr11	118295226	118302403	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002800.1	ENSG00000280032	28409	CD3E	ENSG00000198851	2327	None	None
MER4B_11q23.3	HERV	MER4B	internal	chr11	118674326	118674864	-	noncoding	TREH	protein_coding	SENSE	ENSG00000118094	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11q23.3c	HERV	ERVLE	internal	chr11	118707522	118709204	-	noncoding	AP002954.1	lncRNA	ANTISENSE	ENSG00000255422	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_11q23.3b	HERV	HERVH	oneside	chr11	118717034	118721014	-	noncoding	AP002954.1	lncRNA	ANTISENSE	ENSG00000255422	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_11q23.3	HERV	HML2	prototype	chr11	118721015	118730174	-	coding	AP002954.1,AP002954.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000255422,ENSG00000287238	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_11q23.3c	HERV	HERVH	oneside	chr11	118730175	118731855	-	noncoding	AP002954.1	lncRNA	ANTISENSE	ENSG00000255422	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11q23.3d	HERV	ERVLE	internal	chr11	118740784	118743520	-	noncoding	AP002954.1	lncRNA	ANTISENSE	ENSG00000255422	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11q23.3e	HERV	ERVLE	internal	chr11	118843946	118848652	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP004609.1	ENSG00000201535	7835	CXCR5	ENSG00000160683	35240	None	None
MER41_11q23.3	HERV	MER41	oneside	chr11	118866008	118867768	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP004609.1	ENSG00000201535	29897	CXCR5	ENSG00000160683	16124	None	None
ERV316A3_11q23.3d	HERV	ERV316A3	oneside	chr11	119631783	119634896	+	noncoding	AP003393.1,NECTIN1	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000254561,ENSG00000110400	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11q23.3e	HERV	ERV316A3	prototype	chr11	119925709	119932163	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001360.3	ENSG00000286992	43948	AP001994.3	ENSG00000288047	5713	None	None
ERV316A3_11q23.3f	HERV	ERV316A3	prototype	chr11	121092973	121099241	-	noncoding	AP000646.1	protein_coding	ANTISENSE	ENSG00000285509	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_11q23.3	HERV	HML1	prototype	chr11	121236524	121240494	+	noncoding	AP001124.1	processed_pseudogene	SENSE	ENSG00000254515	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr11:121236502-121236805	chr11:121236799-121236804
HML6_11q23.3	HERV	HML6	prototype	chr11	121282476	121285888	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS4XP12	ENSG00000244400	31498	SC5D	ENSG00000109929	6793	chr11:121283093-121283199	None
ERVLE_11q24.1a	HERV	ERVLE	oneside	chr11	121315682	121316940	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SC5D	ENSG00000109929	2272	BMPR1AP2	ENSG00000232460	44914	None	None
PRIMA4_11q24.1	HERV	PRIMA4	prototype	chr11	121369325	121374752	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002365.1	ENSG00000271022	51893	BMPR1AP2	ENSG00000232460	6460	None	None
HERVH_11q24.1a	HERV	HERVH	prototype	chr11	121637351	121643560	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001977.1	ENSG00000286044	30701	SORL1	ENSG00000137642	3588	None	chr11:121643210-121643215
HERVL_11q24.1	HERV	HERVL	prototype	chr11	122009866	122016384	+	noncoding	AP001924.1	lncRNA	ANTISENSE	ENSG00000286023	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11q24.1	HERV	ERV316A3	internal	chr11	122395578	122399222	+	noncoding	MIR100HG	lncRNA	ANTISENSE	ENSG00000255248	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_11q24.1b	HERV	HERVH	prototype	chr11	122546527	122555602	+	noncoding	MIR100HG	lncRNA	ANTISENSE	ENSG00000255248	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_11q24.1	HERV	HUERSP1	prototype	chr11	122818447	122822637	+	noncoding	AP002762.2	lncRNA	ANTISENSE	ENSG00000285909	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_11q24.1c	HERV	HERVH	prototype	chr11	122824428	122832822	+	coding	AP002762.2	lncRNA	ANTISENSE	ENSG00000285909	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11q24.1b	HERV	ERVLE	oneside	chr11	123678974	123681289	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002765.1	ENSG00000254467	3405	ZNF202	ENSG00000166261	42625	None	None
MER4_11q24.1	HERV	MER4	prototype	chr11	123787888	123794689	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR6M1	ENSG00000196099	10646	RNU1-21P	ENSG00000200197	23799	None	None
HERVH_11q24.1d	HERV	HERVH	prototype	chr11	123865322	123871065	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM225	ENSG00000204300	11855	OR6M3P	ENSG00000254430	2801	None	None
HERVL_11q24.2a	HERV	HERVL	internal	chr11	124005046	124006348	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR10G5P	ENSG00000226461	3307	OR10G6	ENSG00000198674	9885	None	None
ERVLE_11q24.2a	HERV	ERVLE	internal	chr11	124714908	124717588	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPA17	ENSG00000064199	17390	NRGN	ENSG00000154146	22354	None	None
HERVL_11q24.2b	HERV	HERVL	oneside	chr11	124824461	124826386	-	noncoding	AP000866.1	lncRNA	ANTISENSE	ENSG00000245498	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_11q24.2c	HERV	HERVL	prototype	chr11	124905083	124914030	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HEPACAM	ENSG00000165478	5175	ROBO4	ENSG00000154133	6583	None	None
HERVL_11q24.2d	HERV	HERVL	prototype	chr11	125028850	125035326	-	noncoding	CCDC15	protein_coding	ANTISENSE	ENSG00000149548	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_11q24.2a	HERV	MER4B	internal	chr11	125542655	125543347	+	noncoding	FEZ1	protein_coding	ANTISENSE	ENSG00000149557	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_11q24.2	HERV	HUERSP3B	prototype	chr11	125548047	125555868	-	noncoding	FEZ1	protein_coding	SENSE	ENSG00000149557	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_11q24.2b	HERV	MER4B	internal	chr11	125562851	125564490	+	noncoding	FEZ1	protein_coding	ANTISENSE	ENSG00000149557	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_11q24.2c	HERV	MER4B	internal	chr11	125564580	125565301	-	noncoding	FEZ1	protein_coding	SENSE	ENSG00000149557	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11q24.2b	HERV	ERVLE	internal	chr11	125751253	125752609	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PATE2	ENSG00000196844	23504	PATE1	ENSG00000171053	1386	None	None
ERV316A3_11q24.2	HERV	ERV316A3	prototype	chr11	125770580	125773710	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PATE2	ENSG00000196844	2403	PATE1	ENSG00000171053	20713	None	None
HERVIP10F_11q24.2	HERV	HERVIP10F	oneside	chr11	125867226	125872500	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP000842.3	ENSG00000260209	531	PATE4	ENSG00000237353	27154	None	None
HUERSP3_11q24.2	HERV	HUERSP3	oneside	chr11	125873399	125875038	+	noncoding	AP000842.3	lncRNA	ANTISENSE	ENSG00000260209	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_11q24.2	HERV	MER41	prototype	chr11	126843586	126849518	+	noncoding	KIRREL3	protein_coding	ANTISENSE	ENSG00000149571	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_11q24.2a	HERV	HERVH	oneside	chr11	127543108	127548460	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003532.1	ENSG00000254591	109108	RN7SKP279	ENSG00000223315	134960	None	None
ERVLB4_11q24.2	HERV	ERVLB4	internal	chr11	127712134	127713845	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001000.1	ENSG00000254612	227068	AP003532.1	ENSG00000254591	54257	None	None
HERVH_11q24.2b	HERV	HERVH	prototype	chr11	127768919	127774895	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001000.1	ENSG00000254612	166018	AP003532.1	ENSG00000254591	111042	None	None
ERVLB4_11q24.3a	HERV	ERVLB4	oneside	chr11	128092932	128097207	+	noncoding	LINC02725	lncRNA	SENSE	ENSG00000273415	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr11:128095747-128095764,chr11:128095811-128095819,chr11:128095841-128095850,chr11:128095944-128095949,chr11:128095960-128095971,chr11:128095974-128095999,chr11:128096009-128096018,chr11:128096029-128096040
ERVLE_11q24.3a	HERV	ERVLE	internal	chr11	129347944	129348675	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF123P	ENSG00000255259	51463	BARX2	ENSG00000043039	27173	None	None
ERVLE_11q24.3b	HERV	ERVLE	internal	chr11	129353442	129354521	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF123P	ENSG00000255259	56961	BARX2	ENSG00000043039	21327	None	None
ERVLE_11q24.3c	HERV	ERVLE	internal	chr11	129491268	129492583	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BARX2	ENSG00000043039	38989	RPS27P20	ENSG00000240121	45286	None	None
LTR25_11q24.3a	HERV	LTR25	internal	chr11	129548488	129550784	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS27P20	ENSG00000240121	10374	AP003500.1	ENSG00000281386	40709	None	None
ERVLE_11q24.3d	HERV	ERVLE	internal	chr11	129627563	129631486	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003327.2	ENSG00000287426	130227	LINC01395	ENSG00000281097	10294	None	None
ERVLE_11q24.3e	HERV	ERVLE	internal	chr11	129631546	129633544	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003327.2	ENSG00000287426	128169	LINC01395	ENSG00000281097	14277	None	None
ERVLB4_11q24.3b	HERV	ERVLB4	oneside	chr11	129769495	129773102	-	noncoding	AP003327.2	lncRNA	SENSE	ENSG00000287426	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_11q24.3b	HERV	LTR25	internal	chr11	129779830	129785817	-	noncoding	AP003327.2	lncRNA	SENSE	ENSG00000287426	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_11q24.3a	HERV	HERVH	prototype	chr11	130564387	130570121	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR8052	ENSG00000274999	96614	BAK1P2	ENSG00000236616	16958	None	None
ERV316A3_11q24.3a	HERV	ERV316A3	internal	chr11	130587438	130589798	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR8052	ENSG00000274999	76937	BAK1P2	ENSG00000236616	40009	None	None
ERV316A3_11q24.3b	HERV	ERV316A3	oneside	chr11	130592499	130594082	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR8052	ENSG00000274999	72653	BAK1P2	ENSG00000236616	45070	None	None
HERVH_11q24.3b	HERV	HERVH	prototype	chr11	130753498	130759137	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003486.2	ENSG00000288013	12276	C11orf44	ENSG00000175728	36146	None	None
ERVLB4_11q25a	HERV	ERVLB4	oneside	chr11	130928812	130933488	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL167P	ENSG00000242673	70640	SNX19	ENSG00000120451	12303	None	None
ERV316A3_11q25a	HERV	ERV316A3	oneside	chr11	131066744	131069044	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL167P	ENSG00000242673	62315	AP002856.3	ENSG00000236129	117978	None	chr11:131067564-131067574
HERVH_11q25a	HERV	HERVH	prototype	chr11	131254535	131260279	-	noncoding	AP002856.2	lncRNA	ANTISENSE	ENSG00000231698	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_11q25	HERV	HERVL40	prototype	chr11	131958908	131963549	-	noncoding	NTM	protein_coding	ANTISENSE	ENSG00000182667	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_11q25	HERV	MER41	internal	chr11	132082644	132086616	-	noncoding	NTM	protein_coding	ANTISENSE	ENSG00000182667	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_11q25	HERV	MER61	oneside	chr11	132086614	132088831	-	noncoding	NTM	protein_coding	ANTISENSE	ENSG00000182667	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_11q25	HERV	HERVL	prototype	chr11	132375040	132381526	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NTM	ENSG00000182667	38218	AP000843.1	ENSG00000279090	21834	None	None
ERVLE_11q25a	HERV	ERVLE	internal	chr11	132392890	132395771	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NTM	ENSG00000182667	56068	AP000843.1	ENSG00000279090	7589	None	None
ERV316A3_11q25b	HERV	ERV316A3	oneside	chr11	132585660	132588924	+	noncoding	OPCML	protein_coding	ANTISENSE	ENSG00000183715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_11q25	HERV	ERVL	oneside	chr11	132895029	132900105	+	noncoding	OPCML	protein_coding	ANTISENSE	ENSG00000183715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11q25c	HERV	ERV316A3	internal	chr11	133581035	133581937	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP004606.1	ENSG00000287068	31169	LINC02743	ENSG00000255258	201734	None	None
HERVH_11q25b	HERV	HERVH	prototype	chr11	133626775	133632692	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP004606.1	ENSG00000287068	76909	LINC02743	ENSG00000255258	150979	None	None
ERVLB4_11q25b	HERV	ERVLB4	oneside	chr11	133869042	133875426	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001979.1	ENSG00000213153	3415	IGSF9B	ENSG00000080854	21012	None	None
ERV316A3_11q25d	HERV	ERV316A3	oneside	chr11	134611316	134614604	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP004550.1	ENSG00000254573	38260	AP001999.3	ENSG00000286374	41165	None	None
ERVLE_11q25b	HERV	ERVLE	internal	chr11	134637554	134638719	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP004550.1	ENSG00000254573	64498	AP001999.3	ENSG00000286374	17050	None	None
ERV316A3_11q25e	HERV	ERV316A3	internal	chr11	134699210	134701229	+	noncoding	AP001999.2	lncRNA	ANTISENSE	ENSG00000285640	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11q25f	HERV	ERV316A3	internal	chr11	134842316	134843486	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003062.2	ENSG00000287251	101632	LINC02714	ENSG00000251226	78506	None	None
HERVP71A_12p13.33a	HERV	HERVP71A	internal	chr12	107124	110749	-	noncoding	IQSEC3,AC026369.3	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000120645,ENSG00000256948	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_12p13.33b	HERV	HERVP71A	oneside	chr12	110821	112456	-	noncoding	IQSEC3,AC026369.3	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000120645,ENSG00000256948	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:111751-111771
ERV316A3_12p13.33	HERV	ERV316A3	oneside	chr12	425246	428202	-	noncoding	CCDC77	protein_coding	ANTISENSE	ENSG00000120647	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12p13.33	HERV	ERVLE	internal	chr12	2718594	2722529	+	noncoding	ITFG2-AS1	lncRNA	ANTISENSE	ENSG00000256150	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_12p13.32	HERV	HARLEQUIN	prototype	chr12	3422374	3430434	-	coding	PRMT8	protein_coding	ANTISENSE	ENSG00000111218	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_12p13.32	HERV	HERVP71A	prototype	chr12	3516657	3524911	+	noncoding	PRMT8	protein_coding	SENSE	ENSG00000111218	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_12p13.32	HERV	HERVH	prototype	chr12	4018541	4023694	+	noncoding	AC084375.1	lncRNA	SENSE	ENSG00000256969	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:4018922-4018949,chr12:4021088-4021119
ERVLB4_12p13.32	HERV	ERVLB4	prototype	chr12	5122826	5129865	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02443	ENSG00000256115	96331	AC005906.3	ENSG00000285523	30084	None	None
ERVLE_12p13.32	HERV	ERVLE	internal	chr12	5182947	5184691	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02443	ENSG00000256115	41505	AC005906.3	ENSG00000285523	90205	None	None
MER34B_12p13.31	HERV	MER34B	oneside	chr12	5761341	5763520	+	noncoding	ANO2	protein_coding	ANTISENSE	ENSG00000047617	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12p13.31a	HERV	HERVL	prototype	chr12	5818088	5826421	+	noncoding	ANO2	protein_coding	ANTISENSE	ENSG00000047617	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12p13.31a	HERV	ERVLE	internal	chr12	6406143	6407509	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005840.1	ENSG00000213942	2128	AC005840.2	ENSG00000256433	9995	None	None
ERVLB4_12p13.31a	HERV	ERVLB4	internal	chr12	7023788	7024483	+	noncoding	C1S	protein_coding	SENSE	ENSG00000182326	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_12p13.31a	HERV	MER4	oneside	chr12	7024957	7027135	-	noncoding	C1S	protein_coding	ANTISENSE	ENSG00000182326	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12p13.31b	HERV	ERVLB4	oneside	chr12	7028121	7036511	+	noncoding	C1S,AC006512.1	protein_coding,processed_pseudogene	SENSE,SENSE	ENSG00000182326,ENSG00000239701	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVW_12p13.31a	HERV	HERVW	prototype	chr12	7181147	7186533	+	noncoding	AC018653.1	lncRNA	ANTISENSE	ENSG00000255572	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12p13.31b	HERV	ERVLE	internal	chr12	7220204	7221408	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PEX5	ENSG00000139197	1630	AC018653.2	ENSG00000256480	16024	None	None
MER4B_12p13.31a	HERV	MER4B	oneside	chr12	7281171	7283188	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018653.2	ENSG00000256480	40185	ACSM4	ENSG00000215009	21096	None	None
MER4B_12p13.31b	HERV	MER4B	oneside	chr12	7288564	7296167	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018653.2	ENSG00000256480	47578	ACSM4	ENSG00000215009	8117	None	None
MER4_12p13.31b	HERV	MER4	oneside	chr12	7296170	7298140	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ACSM4	ENSG00000215009	6144	AC018653.2	ENSG00000256480	55184	None	None
ERVLB4_12p13.31c	HERV	ERVLB4	oneside	chr12	7396451	7398207	+	noncoding	CD163L1	protein_coding	ANTISENSE	ENSG00000177675	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_12p13.31a	HERV	MER101	internal	chr12	7538847	7540942	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP31	ENSG00000235868	25427	CD163	ENSG00000177575	34954	None	None
HERVP71A_12p13.31a	HERV	HERVP71A	oneside	chr12	7588093	7593696	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP31	ENSG00000235868	20711	NIFKP3	ENSG00000256331	10654	None	None
HERVP71A_12p13.31b	HERV	HERVP71A	oneside	chr12	7600342	7606495	+	noncoding	NIFKP3	processed_pseudogene	ANTISENSE	ENSG00000256331	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr12:7606180-7606440	None
HUERSP3_12p13.31	HERV	HUERSP3	oneside	chr12	7641019	7646551	+	noncoding	AC006927.5	unprocessed_pseudogene	ANTISENSE	ENSG00000285142	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12p13.31b	HERV	HERVL	oneside	chr12	7996848	8005194	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006511.2	ENSG00000240739	1764	AC006511.5	ENSG00000282080	8899	None	None
ERVLB4_12p13.31d	HERV	ERVLB4	internal	chr12	8114823	8116815	-	noncoding	AC006511.6	lncRNA	ANTISENSE	ENSG00000284697	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_12p13.31a	HERV	HERVH	oneside	chr12	8279023	8282298	-	noncoding	AC092745.5,ENPP7P5	lncRNA,unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000286895,ENSG00000256589	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_12p13.31a	HERV	HERVE	oneside	chr12	8282299	8290617	-	coding	AC092745.5,ENPP7P5,AC092745.4	lncRNA,unprocessed_pseudogene,lncRNA	ANTISENSE,SENSE,SENSE	ENSG00000286895,ENSG00000256589,ENSG00000286504	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_12p13.31b	HERV	HERVH	oneside	chr12	8290618	8294090	-	noncoding	AC092745.5,ENPP7P5	lncRNA,unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000286895,ENSG00000256589	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVS71_12p13.31a	HERV	HERVS71	prototype	chr12	8317488	8324925	-	noncoding	AC092745.5,LINC00937,AC092745.2,AC092745.1	lncRNA,lncRNA,transcribed_processed_pseudogene,lncRNA	ANTISENSE,SENSE,ANTISENSE,ANTISENSE	ENSG00000286895,ENSG00000226091,ENSG00000256552,ENSG00000256101	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:8319666-8319669,chr12:8320342-8320348,chr12:8320270-8320272,chr12:8320260-8320265
ERVLB4_12p13.31e	HERV	ERVLB4	internal	chr12	8392267	8392867	+	noncoding	LINC00937	lncRNA	ANTISENSE	ENSG00000226091	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12p13.31f	HERV	ERVLB4	internal	chr12	8398411	8399014	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00937	ENSG00000226091	1608	AC092865.2	ENSG00000256136	7819	None	None
HERVE_12p13.31b	HERV	HERVE	internal	chr12	8419057	8423114	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR7E148P	ENSG00000214487	4526	OR7E140P	ENSG00000238152	3252	None	None
HERVE_12p13.31c	HERV	HERVE	internal	chr12	8441913	8443743	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CLEC6A	ENSG00000205846	12219	OR7E149P	ENSG00000177586	3488	None	None
HML5_12p13.31	HERV	HML5	internal	chr12	8558451	8562470	-	noncoding	AC092746.1	lncRNA	SENSE	ENSG00000255801	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_12p13.31b	HERV	HERVW	prototype	chr12	8761414	8768468	-	noncoding	RIMKLB	protein_coding	ANTISENSE	ENSG00000166532	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_12p13.31c	HERV	HERVH	prototype	chr12	8804879	8810576	+	noncoding	A2ML1-AS1	lncRNA	ANTISENSE	ENSG00000256661	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_12p13.31	HERV	LTR19	prototype	chr12	9139752	9144991	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PZP	ENSG00000126838	3849	BTG1P1	ENSG00000256720	4161	None	chr12:9144949-9144983,chr12:9144989-9145000
HERVS71_12p13.31b	HERV	HERVS71	oneside	chr12	9322989	9327851	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC009533.4	ENSG00000286911	19177	AC009533.3	ENSG00000255753	6816	None	None
PABLB_12p13.31	HERV	PABLB	internal	chr12	9458421	9461576	-	noncoding	AC092821.4	lncRNA	ANTISENSE	ENSG00000284634	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER61_12p13.31a	HERV	MER61	oneside	chr12	9636613	9641669	-	noncoding	AC092821.4	lncRNA	ANTISENSE	ENSG00000284634	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_12p13.31b	HERV	MER101	oneside	chr12	9657215	9660579	+	noncoding	AC092821.4,AC010186.2,AC010186.3	lncRNA,transcribed_unprocessed_pseudogene,lncRNA	SENSE,SENSE,SENSE	ENSG00000284634,ENSG00000256594,ENSG00000257027	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_12p13.31	HERV	HUERSP2	prototype	chr12	9707423	9711259	+	noncoding	LINC02390	lncRNA	SENSE	ENSG00000256582	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVEA_12p13.31	HERV	HERVEA	oneside	chr12	9712931	9715636	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CLECL1	ENSG00000184293	224	LINC02390	ENSG00000256582	3581	None	None
ERVLE_12p13.31c	HERV	ERVLE	internal	chr12	9815604	9818670	-	noncoding	GCNAP1	processed_pseudogene	SENSE	ENSG00000256912	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_12p13.31d	HERV	HERVH	oneside	chr12	9833927	9836182	-	noncoding	KLRF1	protein_coding	ANTISENSE	ENSG00000150045	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr12:9833988-9834326	chr12:9833988-9833990
ERVLE_12p13.31d	HERV	ERVLE	internal	chr12	9879671	9880497	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CLEC2B	ENSG00000110852	9535	KLRF2	ENSG00000256797	992	None	None
MER61_12p13.31b	HERV	MER61	internal	chr12	9898776	9902230	-	noncoding	CLEC2A	protein_coding	SENSE	ENSG00000188393	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVI_12p13.31	HERV	HERVI	prototype	chr12	9902662	9911410	-	noncoding	CLEC2A	protein_coding	SENSE	ENSG00000188393	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr12:9905705-9906041,chr12:9908869-9909259	chr12:9911023-9911031
MER61_12p13.31c	HERV	MER61	oneside	chr12	9911413	9912864	-	noncoding	CLEC2A	protein_coding	SENSE	ENSG00000188393	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_12p13.31e	HERV	HERVH	prototype	chr12	9962437	9968690	-	noncoding	CLEC12A	protein_coding	ANTISENSE	ENSG00000172322	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr12:9964372-9964642	None
MER4B_12p13.31c	HERV	MER4B	oneside	chr12	9984964	9987795	-	noncoding	CLEC12A,CLEC1B	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000172322,ENSG00000165682	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_12p13.2a	HERV	HERVL40	internal	chr12	10277960	10278528	+	noncoding	KLRD1	protein_coding	SENSE	ENSG00000134539	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_12p13.2a	HERV	HERVH	prototype	chr12	10332976	10338643	-	noncoding	LINC02617	lncRNA	SENSE	ENSG00000256288	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_12p13.2	HERV	HERVIP10FH	oneside	chr12	10362141	10363332	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02598	ENSG00000256155	1096	AC022075.1	ENSG00000245648	306	chr12:10362806-10363070	None
HERVIP10F_12p13.2	HERV	HERVIP10F	oneside	chr12	10369013	10372258	+	noncoding	AC022075.1	lncRNA	SENSE	ENSG00000245648	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr12:10370089-10370278	None
MER41_12p13.2	HERV	MER41	prototype	chr12	10653837	10661086	+	noncoding	STYK1	protein_coding	ANTISENSE	ENSG00000060140	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12p13.2a	HERV	ERVLB4	prototype	chr12	10684437	10691402	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	YBX3	ENSG00000060138	7687	STYK1	ENSG00000060140	10119	None	None
ERVLB4_12p13.2b	HERV	ERVLB4	internal	chr12	10960321	10961256	+	noncoding	PRH1,AC018630.2,TAS2R14	protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000231887,ENSG00000275778,ENSG00000212127	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12p13.2a	HERV	ERVLE	internal	chr12	10981067	10983237	+	noncoding	PRH1,AC018630.2,TAS2R14	protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000231887,ENSG00000275778,ENSG00000212127	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_12p13.2	HERV	ERVL	internal	chr12	10992080	10993955	+	noncoding	PRH1,AC018630.2,TAS2R14	protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000231887,ENSG00000275778,ENSG00000212127	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12p13.2a	HERV	HERVL	internal	chr12	11016701	11018258	+	noncoding	PRH1,AC018630.2,TAS2R14	protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000231887,ENSG00000275778,ENSG00000212127	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12p13.2c	HERV	ERVLB4	internal	chr12	11026347	11027868	+	noncoding	PRH1,AC018630.2,TAS2R14	protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000231887,ENSG00000275778,ENSG00000212127	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12p13.2d	HERV	ERVLB4	internal	chr12	11057375	11058810	+	noncoding	PRH1,AC018630.2,TAS2R14	protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000231887,ENSG00000275778,ENSG00000212127	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12p13.2b	HERV	HERVL	internal	chr12	11070735	11073773	+	noncoding	PRH1,AC018630.2,TAS2R14	protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000231887,ENSG00000275778,ENSG00000212127	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12p13.2e	HERV	ERVLB4	internal	chr12	11087471	11088945	+	noncoding	PRH1,AC018630.2,TAS2R14	protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000231887,ENSG00000275778,ENSG00000212127	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12p13.2b	HERV	ERVLE	internal	chr12	11129286	11130617	+	noncoding	PRH1,AC018630.2,TAS2R14	protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000231887,ENSG00000275778,ENSG00000212127	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12p13.2c	HERV	ERVLE	internal	chr12	11152956	11153917	+	noncoding	PRH1,AC018630.2,TAS2R14	protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000231887,ENSG00000275778,ENSG00000212127	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_12p13.2b	HERV	HERVL40	internal	chr12	11370765	11372249	-	noncoding	PRB1	protein_coding	SENSE	ENSG00000251655	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_12p13.2b	HERV	HERVH	prototype	chr12	11462169	11468020	-	noncoding	PRB2,AC078950.1	protein_coding,lncRNA	SENSE,SENSE	ENSG00000121335,ENSG00000255790	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_12p13.2c	HERV	HERVH	prototype	chr12	11609767	11615294	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ETV6	ENSG00000139083	34380	LINC01252	ENSG00000247157	19398	None	None
ERVLE_12p13.2d	HERV	ERVLE	internal	chr12	11635882	11641376	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ETV6	ENSG00000139083	8298	LINC01252	ENSG00000247157	45513	None	None
HERVH_12p13.2d	HERV	HERVH	prototype	chr12	12058472	12064073	+	noncoding	BCL2L14	protein_coding	SENSE	ENSG00000121380	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12p13.1	HERV	ERVLB4	oneside	chr12	13241793	13248674	-	noncoding	AC022276.1	lncRNA	SENSE	ENSG00000286869	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr12:13241858-13242035	None
HERVH_12p13.1a	HERV	HERVH	prototype	chr12	13259639	13265519	-	noncoding	AC022276.1	lncRNA	SENSE	ENSG00000286869	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12p13.1	HERV	ERV316A3	oneside	chr12	14205806	14208695	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092112.1	ENSG00000256084	7895	AC135001.1	ENSG00000227760	13522	None	None
HERVW_12p13.1	HERV	HERVW	internal	chr12	14216760	14221108	+	noncoding	AC092112.1	lncRNA	SENSE	ENSG00000256084	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12p13.1a	HERV	ERVLE	internal	chr12	14224922	14226766	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092112.1	ENSG00000256084	3625	MRPS18CP4	ENSG00000255763	10325	None	None
HERVH_12p13.1b	HERV	HERVH	oneside	chr12	14231407	14237087	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092112.1	ENSG00000256084	10110	MRPS18CP4	ENSG00000255763	4	None	None
HERVL_12p13.1a	HERV	HERVL	prototype	chr12	14292854	14300222	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL30P11	ENSG00000244573	56620	GNAI2P1	ENSG00000255749	37628	None	None
HERVL_12p13.1b	HERV	HERVL	prototype	chr12	14331176	14338695	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GNAI2P1	ENSG00000255749	75950	RPL30P11	ENSG00000244573	18147	None	None
ERVLE_12p13.1b	HERV	ERVLE	internal	chr12	14338698	14340283	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GNAI2P1	ENSG00000255749	83472	RPL30P11	ENSG00000244573	16559	None	None
HERVL_12p13.1c	HERV	HERVL	mergeable*	chr12	14482264	14494650	-	noncoding	ATF7IP	protein_coding	ANTISENSE	ENSG00000171681	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVH_12p12.3a	HERV	HERVH	prototype	chr12	14705421	14710640	-	noncoding	AC010168.1	lncRNA	ANTISENSE	ENSG00000214772	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12p12.3a	HERV	ERV316A3	oneside	chr12	14876490	14877641	-	noncoding	C12orf60	protein_coding	ANTISENSE	ENSG00000182993	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12p12.3a	HERV	ERVLB4	oneside	chr12	14993640	14995697	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PDE6H	ENSG00000139053	11775	LINC01489	ENSG00000255727	6090	None	None
HUERSP1_12p12.3a	HERV	HUERSP1	oneside	chr12	15029534	15031874	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RERG	ENSG00000134533	75909	LINC01489	ENSG00000255727	22535	None	None
HUERSP1_12p12.3b	HERV	HUERSP1	internal	chr12	15031918	15035436	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RERG	ENSG00000134533	72347	LINC01489	ENSG00000255727	24919	None	None
HUERSP1_12p12.3c	HERV	HUERSP1	oneside	chr12	15035535	15037958	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RERG	ENSG00000134533	69825	LINC01489	ENSG00000255727	28536	None	chr12:15036469-15036499
ERVLE_12p12.3a	HERV	ERVLE	internal	chr12	15292046	15292740	+	noncoding	RERG	protein_coding	ANTISENSE	ENSG00000134533	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12p12.3b	HERV	ERVLE	internal	chr12	15391303	15394899	-	noncoding	PTPRO	protein_coding	ANTISENSE	ENSG00000151490	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12p12.3c	HERV	ERVLE	internal	chr12	16313812	16317655	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC15A5	ENSG00000188991	36127	MGST1	ENSG00000008394	29487	None	None
ERV316A3_12p12.3b	HERV	ERV316A3	oneside	chr12	16420464	16422617	-	noncoding	MGST1,AC007528.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000008394,ENSG00000286303	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12p12.3c	HERV	ERV316A3	internal	chr12	16443828	16447656	-	noncoding	MGST1,AC007528.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000008394,ENSG00000286303	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:16444203-16444207
HERVH_12p12.3b	HERV	HERVH	prototype	chr12	17021894	17027363	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092793.1	ENSG00000287455	39005	EEF1A1P16	ENSG00000213235	29811	None	None
HERVE_12p12.3	HERV	HERVE	prototype	chr12	17296914	17304900	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092110.1	ENSG00000285724	129124	PSMC1P8	ENSG00000256896	78452	None	None
ERVLB4_12p12.3b	HERV	ERVLB4	internal	chr12	17428326	17429015	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TIMM17BP1	ENSG00000256756	27412	AC048352.1	ENSG00000256389	50431	None	None
ERVLE_12p12.3d	HERV	ERVLE	internal	chr12	17445665	17446449	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC048352.1	ENSG00000256389	32997	TIMM17BP1	ENSG00000256756	44751	None	None
HERVH_12p12.3c	HERV	HERVH	oneside	chr12	17469895	17474646	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TIMM17BP1	ENSG00000256756	68981	AC048352.1	ENSG00000256389	4800	None	None
PRIMA41_12p12.3	HERV	PRIMA41	oneside	chr12	17536466	17541873	-	noncoding	AC048352.1,LINC02378	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000256389,ENSG00000256994	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_12p12.3d	HERV	HERVH	oneside	chr12	17720252	17725012	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RERGL	ENSG00000111404	355857	AC087321.1	ENSG00000206662	9206	None	None
ERVLE_12p12.3e	HERV	ERVLE	internal	chr12	17740649	17742825	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087321.1	ENSG00000206662	29603	RERGL	ENSG00000111404	338044	None	None
ERVLB4_12p12.3c	HERV	ERVLB4	internal	chr12	17896543	17898261	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087321.1	ENSG00000206662	185497	RERGL	ENSG00000111404	182608	None	None
ERVLE_12p12.3f	HERV	ERVLE	internal	chr12	17974961	17976508	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RERGL	ENSG00000111404	104361	AC087321.1	ENSG00000206662	263915	None	None
HERV9_12p12.3	HERV	HERV9	oneside	chr12	18033479	18041442	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087321.1	ENSG00000206662	322433	RERGL	ENSG00000111404	39427	None	None
HML1_12p12.3a	HERV	HML1	oneside	chr12	18066676	18067971	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC087321.1	ENSG00000206662	355630	RERGL	ENSG00000111404	12898	None	None
HERVW_12p12.3	HERV	HERVW	internal	chr12	18068008	18070640	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087321.1	ENSG00000206662	356962	RERGL	ENSG00000111404	10229	None	None
HML1_12p12.3b	HERV	HML1	oneside	chr12	18070641	18071863	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087321.1	ENSG00000206662	359595	RERGL	ENSG00000111404	9006	None	None
ERV316A3_12p12.3d	HERV	ERV316A3	internal	chr12	18079145	18079559	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087321.1	ENSG00000206662	368099	RERGL	ENSG00000111404	1310	None	None
ERVLE_12p12.3g	HERV	ERVLE	internal	chr12	18120777	18121776	+	noncoding	RERGL	protein_coding	ANTISENSE	ENSG00000111404	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_12p12.3	HERV	PRIMA4	internal	chr12	18159638	18161604	+	noncoding	RERGL	protein_coding	ANTISENSE	ENSG00000111404	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_12p12.3	HERV	HERVIP10FH	prototype	chr12	18172692	18178556	+	noncoding	RERGL	protein_coding	ANTISENSE	ENSG00000111404	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_12p12.3e	HERV	HERVH	prototype	chr12	18195661	18203727	+	coding	RERGL	protein_coding	ANTISENSE	ENSG00000111404	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_12p12.3	HERV	HUERSP2	prototype	chr12	18352321	18357025	-	noncoding	PIK3C2G	protein_coding	ANTISENSE	ENSG00000139144	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12p12.3d	HERV	ERVLB4	prototype	chr12	18632421	18638744	-	noncoding	PIK3C2G	protein_coding	ANTISENSE	ENSG00000139144	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12p12.3e	HERV	ERV316A3	prototype	chr12	18812570	18814272	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CAPZA3	ENSG00000177938	73382	RPL7P6	ENSG00000227525	274879	None	None
ERVLE_12p12.3h	HERV	ERVLE	oneside	chr12	18882800	18885179	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CAPZA3	ENSG00000177938	143612	RPL7P6	ENSG00000227525	203972	None	None
ERVLE_12p12.3i	HERV	ERVLE	internal	chr12	18927910	18930898	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CAPZA3	ENSG00000177938	188722	RPL7P6	ENSG00000227525	158253	None	None
ERV316A3_12p12.3f	HERV	ERV316A3	oneside	chr12	19695669	19700207	-	noncoding	AEBP2	protein_coding	ANTISENSE	ENSG00000139154	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_12p12.2	HERV	HUERSP2	internal	chr12	20209542	20210062	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02468	ENSG00000256499	73379	AC129102.1	ENSG00000256879	151670	None	None
ERV316A3_12p12.2a	HERV	ERV316A3	internal	chr12	20218583	20219503	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC129102.1	ENSG00000256879	142229	LINC02468	ENSG00000256499	82420	None	None
ERV316A3_12p12.2b	HERV	ERV316A3	oneside	chr12	20225131	20226250	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC129102.1	ENSG00000256879	135482	LINC02468	ENSG00000256499	88968	None	None
ERVLE_12p12.2	HERV	ERVLE	internal	chr12	20328556	20329976	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02468	ENSG00000256499	192393	AC129102.1	ENSG00000256879	31756	None	None
HERVH_12p12.2a	HERV	HERVH	prototype	chr12	20762909	20769058	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLCO1C1	ENSG00000139155	9523	SLCO1B3	ENSG00000111700	41644	None	None
HERVH_12p12.2b	HERV	HERVH	oneside	chr12	20817908	20822617	-	noncoding	SLCO1B3,SLCO1B3-SLCO1B7	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000111700,ENSG00000257046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr12:20822538-20822555,chr12:20822582-20822628,chr12:20822290-20822292
MER4_12p12.2a	HERV	MER4	prototype	chr12	20822626	20830681	-	noncoding	SLCO1B3,SLCO1B3-SLCO1B7	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000111700,ENSG00000257046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr12:20822582-20822628
HARLEQUIN_12p12.2	HERV	HARLEQUIN	oneside	chr12	20937493	20944851	-	noncoding	SLCO1B3-SLCO1B7	protein_coding	ANTISENSE	ENSG00000257046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_12p12.2	HERV	HUERSP3	oneside	chr12	20945948	20951883	-	noncoding	SLCO1B3-SLCO1B7	protein_coding	ANTISENSE	ENSG00000257046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_12p12.2b	HERV	MER4	oneside	chr12	20963717	20967692	-	noncoding	SLCO1B3-SLCO1B7,SLCO1B7	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000257046,ENSG00000205754	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_12p12.2	HERV	LTR57	internal	chr12	20967693	20968283	-	noncoding	SLCO1B3-SLCO1B7,SLCO1B7	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000257046,ENSG00000205754	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_12p12.2c	HERV	MER4	internal	chr12	20968284	20969097	-	noncoding	SLCO1B3-SLCO1B7,SLCO1B7	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000257046,ENSG00000205754	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_12p12.1	HERV	HUERSP1	oneside	chr12	21231389	21234666	-	noncoding	SLCO1B1	protein_coding	ANTISENSE	ENSG00000134538	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_12p12.1a	HERV	MER4B	oneside	chr12	21322253	21325951	-	noncoding	SLCO1A2	protein_coding	SENSE	ENSG00000084453	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:21324667-21324689,chr12:21324713-21324768,chr12:21324787-21324794
MER4B_12p12.1b	HERV	MER4B	oneside	chr12	21328851	21332655	-	noncoding	SLCO1A2	protein_coding	SENSE	ENSG00000084453	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12p12.1a	HERV	ERVLE	oneside	chr12	21492564	21499139	+	noncoding	RECQL	protein_coding	ANTISENSE	ENSG00000004700	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12p12.1a	HERV	HERVL	prototype	chr12	21582173	21586504	+	noncoding	GYS2,AC010197.2	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000111713,ENSG00000285854	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_12p12.1	HERV	MER4	tandem*	chr12	22299070	22306344	+	noncoding	ST8SIA1	protein_coding	ANTISENSE	ENSG00000111728	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_12p12.1	HERV	MER34B	oneside	chr12	22398318	22400101	-	noncoding	ST8SIA1	protein_coding	SENSE	ENSG00000111728	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12p12.1a	HERV	ERVLB4	oneside	chr12	22562756	22563943	+	noncoding	AC053513.1	lncRNA	SENSE	ENSG00000250166	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_12p12.1a	HERV	MER41	oneside	chr12	22613580	22615521	+	noncoding	AC053513.1,AC087241.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000250166,ENSG00000257023	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_12p12.1	HERV	PABLA	internal	chr12	22615824	22618469	+	noncoding	AC053513.1,AC087241.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000250166,ENSG00000257023	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12p12.1a	HERV	ERV316A3	oneside	chr12	22702957	22705593	+	noncoding	AC084816.1	lncRNA	SENSE	ENSG00000256995	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12p12.1b	HERV	ERVLB4	internal	chr12	22819186	22822707	+	noncoding	AC084816.1	lncRNA	SENSE	ENSG00000256995	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12p12.1b	HERV	ERVLE	internal	chr12	23154745	23155785	+	noncoding	AC084816.1	lncRNA	SENSE	ENSG00000256995	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_12p12.1a	HERV	HERVL40	oneside	chr12	23300499	23303665	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087235.1	ENSG00000115934	49000	SOX5	ENSG00000134532	225839	None	None
ERVLB4_12p12.1c	HERV	ERVLB4	internal	chr12	23303681	23304365	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087235.1	ENSG00000115934	52182	SOX5	ENSG00000134532	225139	None	None
ERVLE_12p12.1c	HERV	ERVLE	internal	chr12	23430153	23431578	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087235.1	ENSG00000115934	178654	SOX5	ENSG00000134532	97926	None	None
HERVH_12p12.1a	HERV	HERVH	prototype	chr12	23505831	23511572	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SOX5	ENSG00000134532	17932	AC087235.1	ENSG00000115934	254332	None	None
HERVL40_12p12.1b	HERV	HERVL40	prototype	chr12	24570440	24572732	+	noncoding	LINC00477	lncRNA	ANTISENSE	ENSG00000197503	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_12p12.1c	HERV	HERVL40	prototype	chr12	24733093	24734968	+	noncoding	AC023796.1	lncRNA	SENSE	ENSG00000255745	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_12p12.1b	HERV	MER41	oneside	chr12	24856758	24862303	+	noncoding	BCAT1	protein_coding	ANTISENSE	ENSG00000060982	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_12p12.1b	HERV	HERVH	prototype	chr12	25163213	25169515	+	noncoding	CASC1	protein_coding	ANTISENSE	ENSG00000118307	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12p12.1b	HERV	HERVL	prototype	chr12	25307152	25313857	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRAS	ENSG00000133703	56216	AC087239.1	ENSG00000278743	71813	None	None
ERV316A3_12p12.1b	HERV	ERV316A3	internal	chr12	25437598	25442371	-	noncoding	LMNTD1,TUBB4BP1	protein_coding,processed_pseudogene	SENSE,SENSE	ENSG00000152936,ENSG00000255988	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_12p12.1c	HERV	HERVL	oneside	chr12	25477837	25480140	-	noncoding	LMNTD1	protein_coding	SENSE	ENSG00000152936	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12p12.1c	HERV	ERV316A3	internal	chr12	26292768	26295393	+	noncoding	SSPN,AC022509.2,AC022509.1	protein_coding,lncRNA,lncRNA	SENSE,ANTISENSE,ANTISENSE	ENSG00000123096,ENSG00000256234,ENSG00000255750	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_12p11.23a	HERV	MER41	prototype	chr12	26752242	26757215	+	noncoding	ITPR2	protein_coding	ANTISENSE	ENSG00000123104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12p11.23	HERV	HERVL	prototype	chr12	26775547	26782199	+	coding	ITPR2	protein_coding	ANTISENSE	ENSG00000123104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12p11.23	HERV	ERVLE	internal	chr12	27030605	27031659	-	noncoding	MED21	protein_coding	ANTISENSE	ENSG00000152944	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12p11.23a	HERV	ERV316A3	internal	chr12	27043819	27044742	-	noncoding	MED21	protein_coding	ANTISENSE	ENSG00000152944	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12p11.23b	HERV	ERV316A3	internal	chr12	27044886	27046043	-	noncoding	MED21	protein_coding	ANTISENSE	ENSG00000152944	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12p11.23c	HERV	ERV316A3	internal	chr12	27163101	27164330	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STK38L	ENSG00000211455	79638	AC092747.1	ENSG00000256226	1708	None	None
MER41_12p11.23b	HERV	MER41	oneside	chr12	27230552	27232175	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STK38L	ENSG00000211455	11793	AC092747.1	ENSG00000256226	69159	None	None
ERVLE_12p11.22a	HERV	ERVLE	internal	chr12	28079349	28080367	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC91	ENSG00000123106	52882	PTHLH	ENSG00000087494	106616	None	None
ERV316A3_12p11.22a	HERV	ERV316A3	oneside	chr12	28176270	28178703	+	noncoding	CCDC91,AC022364.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000123106,ENSG00000247934	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12p11.22a	HERV	ERVLB4	oneside	chr12	28212976	28215406	+	noncoding	CCDC91	protein_coding	SENSE	ENSG00000123106	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_12p11.22	HERV	ERVL	internal	chr12	28493920	28495611	-	noncoding	CCDC91	protein_coding	ANTISENSE	ENSG00000123106	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12p11.22b	HERV	ERV316A3	oneside	chr12	28507767	28509038	-	noncoding	CCDC91	protein_coding	ANTISENSE	ENSG00000123106	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12p11.22b	HERV	ERVLE	internal	chr12	28680075	28681004	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022081.1	ENSG00000256513	140971	CCDC91	ENSG00000123106	98564	None	None
HERV4_12p11.22	HERV	HERV4	oneside	chr12	28808391	28811016	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022081.1	ENSG00000256513	10959	CCDC91	ENSG00000123106	226880	None	None
HERVL18_12p11.22	HERV	HERVL18	prototype	chr12	28813823	28819402	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC91	ENSG00000123106	232312	AC022081.1	ENSG00000256513	2573	None	None
ERVLB4_12p11.22b	HERV	ERVLB4	internal	chr12	29035514	29037502	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012150.1	ENSG00000257258	105467	AC024255.1	ENSG00000278687	56829	None	None
LTR25_12p11.22a	HERV	LTR25	internal	chr12	29133833	29134615	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012150.1	ENSG00000257258	8354	AC024255.1	ENSG00000278687	155148	None	None
HERVH_12p11.22a	HERV	HERVH	prototype	chr12	29134620	29140801	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012150.1	ENSG00000257258	2168	AC024255.1	ENSG00000278687	155935	chr12:29135389-29135651	None
LTR25_12p11.22b	HERV	LTR25	internal	chr12	29140802	29145444	-	coding	AC012150.1	lncRNA	SENSE	ENSG00000257258	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12p11.22c	HERV	ERVLB4	oneside	chr12	29250813	29253520	+	noncoding	FAR2	protein_coding	SENSE	ENSG00000064763	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12p11.22c	HERV	ERVLE	internal	chr12	29773476	29774169	-	noncoding	TMTC1	protein_coding	SENSE	ENSG00000133687	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12p11.22d	HERV	ERVLE	internal	chr12	29825831	29826524	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMTC1	ENSG00000133687	41072	AC023511.3	ENSG00000286566	259818	None	None
HERVL_12p11.22	HERV	HERVL	oneside	chr12	29933443	29936169	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023511.3	ENSG00000286566	150173	TMTC1	ENSG00000133687	148684	None	None
HERVH_12p11.22b	HERV	HERVH	prototype	chr12	30056081	30062516	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMTC1	ENSG00000133687	271322	AC023511.3	ENSG00000286566	23826	None	None
ERV316A3_12p11.22c	HERV	ERV316A3	prototype	chr12	30146767	30152218	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023511.3	ENSG00000286566	16177	AC023511.2	ENSG00000276431	17663	None	None
ERV316A3_12p11.22d	HERV	ERV316A3	oneside	chr12	30172362	30177161	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023511.2	ENSG00000276431	2271	AC023511.1	ENSG00000257262	23822	None	None
ERVLB4_12p11.22d	HERV	ERVLB4	internal	chr12	30325863	30330604	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026371.1	ENSG00000258202	124315	AC078776.1	ENSG00000257932	4246	None	None
ERVLE_12p11.22e	HERV	ERVLE	internal	chr12	30358703	30360235	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC078776.1	ENSG00000257932	37086	AC026371.1	ENSG00000258202	94684	None	None
HUERSP1_12p11.22	HERV	HUERSP1	prototype	chr12	30368589	30375022	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC026371.1	ENSG00000258202	79897	AC078776.1	ENSG00000257932	46972	None	None
MER4_12p11.21	HERV	MER4	prototype	chr12	30770777	30778528	+	noncoding	AC010198.1,LINC00941	lncRNA,lncRNA	SENSE,SENSE	ENSG00000246331,ENSG00000235884	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_12p11.21	HERV	HUERSP3	prototype	chr12	30843694	30850964	+	noncoding	AC010198.2	lncRNA	SENSE	ENSG00000285517	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr12:30844100-30844137
HML6_12p11.21	HERV	HML6	oneside	chr12	31026265	31027497	+	noncoding	DDX11-AS1	lncRNA	ANTISENSE	ENSG00000245614	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLB_12p11.21	HERV	PABLB	internal	chr12	31060430	31063674	+	noncoding	DDX11-AS1	lncRNA	ANTISENSE	ENSG00000245614	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_12p11.21a	HERV	PRIMA4	internal	chr12	31303236	31307315	-	noncoding	SINHCAF	protein_coding	SENSE	ENSG00000139146	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:31304116-31304120
PRIMA4_12p11.21b	HERV	PRIMA4	internal	chr12	31307571	31315051	-	noncoding	SINHCAF,AC024940.4	protein_coding,processed_pseudogene	SENSE,ANTISENSE	ENSG00000139146,ENSG00000256176	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_12p11.21	HERV	PRIMA41	oneside	chr12	31637873	31642050	+	noncoding	AC068774.1	lncRNA	ANTISENSE	ENSG00000287388	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_12p11.21	HERV	HERVL40	internal	chr12	31721046	31722796	+	noncoding	AMN1	protein_coding	ANTISENSE	ENSG00000151743	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_12p11.21	HERV	MER41	prototype	chr12	31847621	31852561	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023050.2	ENSG00000252204	36431	AC023050.3	ENSG00000256372	460	None	None
ERVLE_12p11.21a	HERV	ERVLE	internal	chr12	31888520	31889291	+	noncoding	LINC02422	lncRNA	ANTISENSE	ENSG00000255760	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH19_12p11.21	HERV	HERVFH19	oneside	chr12	31906332	31909833	+	noncoding	LINC02422	lncRNA	ANTISENSE	ENSG00000255760	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr12:31906622-31906986	chr12:31906983-31906986
HERV4_12p11.21	HERV	HERV4	oneside	chr12	31936771	31945711	-	noncoding	LINC02422	lncRNA	SENSE	ENSG00000255760	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12p11.21b	HERV	ERVLE	internal	chr12	32001005	32003619	+	noncoding	AC016957.2	lncRNA	SENSE	ENSG00000276136	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_12p11.21	HERV	HERVIP10FH	prototype	chr12	32025634	32028539	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC016957.1	ENSG00000257094	18199	AC048344.2	ENSG00000257852	44195	None	None
HERVH_12p11.21	HERV	HERVH	prototype	chr12	33087850	33090857	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SYT10	ENSG00000110975	283381	AC087311.2	ENSG00000257435	94096	None	None
ERVLE_12p11.1	HERV	ERVLE	internal	chr12	33289141	33291710	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087311.2	ENSG00000257435	295387	SYT10	ENSG00000110975	82528	None	None
HERVL40_12p11.1	HERV	HERVL40	oneside	chr12	33572812	33575304	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-400P	ENSG00000212475	791	AC016956.1	ENSG00000256070	117360	None	None
MER34B_12p11.1a	HERV	MER34B	internal	chr12	33654944	33658262	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC024153.1	ENSG00000270807	59591	RNU6-400P	ENSG00000212475	78744	None	None
MER34B_12p11.1b	HERV	MER34B	internal	chr12	33658358	33660421	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC024153.1	ENSG00000270807	57432	RNU6-400P	ENSG00000212475	82158	None	None
HERVW_12p11.1	HERV	HERVW	oneside	chr12	34100121	34102956	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC046130.3	ENSG00000256538	41376	AC140847.1	ENSG00000255628	46883	None	None
PRIMA41_12p11.1	HERV	PRIMA41	internal	chr12	34167084	34172852	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC140847.2	ENSG00000255652	17619	TUBB8P4	ENSG00000250788	130	None	None
HERVH_12p11.1	HERV	HERVH	prototype	chr12	34265545	34274257	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AK6P1	ENSG00000256614	15587	ZNF970P	ENSG00000258368	3301330	None	None
HERVK11_12p11.1a	HERV	HERVK11	prototype	chr12	34461079	34463027	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF970P	ENSG00000258368	3112560	AK6P1	ENSG00000256614	211121	None	None
HERVK11_12p11.1b	HERV	HERVK11	prototype	chr12	34521109	34530751	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AK6P1	ENSG00000256614	271151	ZNF970P	ENSG00000258368	3044836	None	None
HML2_12p11.1	HERV	HML2	prototype	chr12	34619620	34629282	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF970P	ENSG00000258368	2946305	AK6P1	ENSG00000256614	369662	None	None
ERVLE_12q11	HERV	ERVLE	internal	chr12	37499752	37501384	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AK6P1	ENSG00000256614	3249794	ZNF970P	ENSG00000258368	74203	None	None
HERVW_12q12a	HERV	HERVW	oneside	chr12	38028269	38031180	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AK6P2	ENSG00000257173	47349	ZNF970P	ENSG00000258368	451885	None	None
HERVK11D_12q12	HERV	HERVK11D	prototype	chr12	38122839	38130125	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CLUHP8	ENSG00000258278	35447	AC079460.1	ENSG00000274293	19925	None	None
PRIMA41_12q12	HERV	PRIMA41	internal	chr12	38195748	38201362	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079460.2	ENSG00000287442	28117	TUBB8P5	ENSG00000254381	204	None	None
ERV316A3_12q12a	HERV	ERV316A3	oneside	chr12	38258215	38260254	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NF1P12	ENSG00000258360	51023	AC117372.1	ENSG00000253016	14194	None	None
HERVL_12q12a	HERV	HERVL	internal	chr12	38423264	38426005	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087897.1	ENSG00000257645	106890	ALG10B	ENSG00000175548	93543	None	None
HERVW_12q12b	HERV	HERVW	oneside	chr12	38471581	38474423	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ALG10B	ENSG00000175548	141860	AC087897.1	ENSG00000257645	58472	None	None
ERV316A3_12q12b	HERV	ERV316A3	prototype	chr12	38563664	38569169	+	noncoding	AC087897.2	lncRNA	ANTISENSE	ENSG00000258119	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_12q12c	HERV	HERVW	prototype	chr12	38636501	38641551	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087897.2	ENSG00000258119	46689	CPNE8	ENSG00000139117	5271	None	None
ERVLE_12q12a	HERV	ERVLE	internal	chr12	38923607	38924220	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018448.2	ENSG00000257586	70583	CPNE8-AS1	ENSG00000257718	14015	None	None
HERVIP10F_12q12	HERV	HERVIP10F	prototype	chr12	38930939	38938679	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018448.2	ENSG00000257586	56124	CPNE8-AS1	ENSG00000257718	21347	None	None
ERVLE_12q12b	HERV	ERVLE	internal	chr12	38954732	38956346	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018448.2	ENSG00000257586	38457	CPNE8-AS1	ENSG00000257718	45140	None	None
ERVLE_12q12c	HERV	ERVLE	internal	chr12	39132420	39133359	+	noncoding	LINC02406	lncRNA	ANTISENSE	ENSG00000258144	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_12q12a	HERV	HML3	oneside	chr12	39188962	39192190	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KIF21A	ENSG00000139116	101038	AC084373.1	ENSG00000270718	18082	None	None
HML3_12q12b	HERV	HML3	oneside	chr12	39197559	39201222	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KIF21A	ENSG00000139116	92006	AC084373.1	ENSG00000270718	26679	None	None
ERVLB4_12q12a	HERV	ERVLB4	prototype	chr12	39249724	39252970	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084373.1	ENSG00000270718	78844	KIF21A	ENSG00000139116	40258	None	None
HUERSP1_12q12	HERV	HUERSP1	oneside	chr12	39543949	39545300	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ABCD2	ENSG00000173208	4733	AC121334.2	ENSG00000270273	4098	None	None
MER4_12q12a	HERV	MER4	oneside	chr12	40160628	40165076	-	noncoding	LINC02471	lncRNA	ANTISENSE	ENSG00000223914	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_12q12b	HERV	MER4	oneside	chr12	40187163	40191467	-	noncoding	LINC02471,LRRK2-DT	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000223914,ENSG00000225342	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_12q12c	HERV	MER4	internal	chr12	40191686	40193336	-	noncoding	LINC02471,LRRK2-DT	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000223914,ENSG00000225342	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_12q12d	HERV	MER4	oneside	chr12	40193379	40194785	-	noncoding	LINC02471,LRRK2-DT	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000223914,ENSG00000225342	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_12q12e	HERV	MER4	prototype	chr12	40210828	40213880	+	noncoding	LINC02471,LRRK2-DT,LRRK2	lncRNA,lncRNA,protein_coding	SENSE,ANTISENSE,SENSE	ENSG00000223914,ENSG00000225342,ENSG00000188906	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVW_12q12d	HERV	HERVW	prototype	chr12	40383636	40389538	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LRRK2	ENSG00000188906	14351	MUC19	ENSG00000205592	3857	None	None
ERVLE_12q12d	HERV	ERVLE	internal	chr12	40629762	40633482	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MUC19	ENSG00000205592	58930	CNTN1	ENSG00000018236	58957	None	None
HUERSP3_12q12a	HERV	HUERSP3	prototype	chr12	41007410	41013488	-	noncoding	CNTN1	protein_coding	ANTISENSE	ENSG00000018236	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12q12e	HERV	ERVLE	internal	chr12	41769771	41771459	+	noncoding	LINC02400	lncRNA	SENSE	ENSG00000257784	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12q12f	HERV	ERVLE	internal	chr12	42247198	42248910	-	noncoding	PPHLN1	protein_coding	ANTISENSE	ENSG00000134283	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12q12g	HERV	ERVLE	internal	chr12	42254980	42256486	-	noncoding	PPHLN1	protein_coding	ANTISENSE	ENSG00000134283	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_12q12a	HERV	HML5	prototype	chr12	42442199	42447156	+	noncoding	PPHLN1	protein_coding	SENSE	ENSG00000134283	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr12:42442533-42442546
ERVLE_12q12h	HERV	ERVLE	internal	chr12	43055727	43056575	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPS36P5	ENSG00000257927	1341	LINC02461	ENSG00000258331	98740	None	None
ERVLB4_12q12b	HERV	ERVLB4	prototype	chr12	43115977	43119389	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02461	ENSG00000258331	35926	MRPS36P5	ENSG00000257927	61591	None	None
ERVLB4_12q12c	HERV	ERVLB4	internal	chr12	43250033	43254826	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADAMTS20	ENSG00000173157	99040	LINC02461	ENSG00000258331	86923	None	None
ERV316A3_12q12c	HERV	ERV316A3	internal	chr12	43339349	43341392	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADAMTS20	ENSG00000173157	12474	LINC02461	ENSG00000258331	176239	None	None
HUERSP3B_12q12	HERV	HUERSP3B	prototype	chr12	43699086	43705818	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EEF1A1P17	ENSG00000257907	37985	PUS7L	ENSG00000129317	13175	None	None
HML5_12q12b	HERV	HML5	prototype	chr12	43976280	43981167	-	noncoding	TMEM117	protein_coding	ANTISENSE	ENSG00000139173	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_12q12	HERV	MER41	prototype	chr12	44028334	44033463	+	noncoding	TMEM117	protein_coding	SENSE	ENSG00000139173	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12q12b	HERV	HERVL	prototype	chr12	44042385	44047187	+	noncoding	TMEM117	protein_coding	SENSE	ENSG00000139173	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12q12d	HERV	ERV316A3	oneside	chr12	44399803	44403346	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM117	ENSG00000139173	10041	AC025253.1	ENSG00000275286	95270	None	None
HERVH_12q12	HERV	HERVH	prototype	chr12	44450052	44456067	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM117	ENSG00000139173	60290	AC025253.1	ENSG00000275286	42549	None	None
HUERSP3_12q12b	HERV	HUERSP3	oneside	chr12	44475471	44481684	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM117	ENSG00000139173	85709	AC025253.1	ENSG00000275286	16932	None	None
ERV316A3_12q12e	HERV	ERV316A3	oneside	chr12	45546734	45548929	-	noncoding	AC079950.1	lncRNA	SENSE	ENSG00000257657	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12q12d	HERV	ERVLB4	oneside	chr12	45584263	45588528	+	noncoding	AC079950.1	lncRNA	ANTISENSE	ENSG00000257657	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12q13.11a	HERV	ERV316A3	oneside	chr12	46001643	46004796	-	noncoding	AC084878.1	processed_pseudogene	SENSE	ENSG00000239397	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr12:46004706-46004911	None
HERVH_12q13.11a	HERV	HERVH	oneside	chr12	46031918	46037041	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084878.1	ENSG00000239397	27233	SLC38A1	ENSG00000111371	146022	None	None
PABLB_12q13.11	HERV	PABLB	internal	chr12	46090550	46095133	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084878.1	ENSG00000239397	85865	SLC38A1	ENSG00000111371	87930	None	None
MER41_12q13.11	HERV	MER41	prototype	chr12	46253205	46258347	-	noncoding	SLC38A1	protein_coding	SENSE	ENSG00000111371	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_12q13.11b	HERV	HERVH	oneside	chr12	46321305	46326337	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC38A2	ENSG00000134294	31851	SLC38A1	ENSG00000111371	51288	None	None
ERVLE_12q13.11a	HERV	ERVLE	internal	chr12	46718316	46720207	-	noncoding	AC008014.1	lncRNA	ANTISENSE	ENSG00000257261	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12q13.11a	HERV	HERVL	prototype	chr12	46727181	46734247	-	noncoding	AC008014.1	lncRNA	ANTISENSE	ENSG00000257261	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_12q13.11	HERV	MER4	mergeable*	chr12	46855043	46860881	-	noncoding	AC008014.1	lncRNA	ANTISENSE	ENSG00000257261	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12q13.11b	HERV	HERVL	prototype	chr12	46860882	46867418	-	noncoding	AC008014.1	lncRNA	ANTISENSE	ENSG00000257261	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_12q13.11	HERV	HML3	prototype	chr12	47443339	47448766	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADI1P3	ENSG00000258369	14321	LINC02156	ENSG00000257906	23147	None	None
HERVH_12q13.11c	HERV	HERVH	oneside	chr12	48111344	48115676	-	noncoding	PFKM	protein_coding	ANTISENSE	ENSG00000152556	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12q13.11b	HERV	ERVLE	internal	chr12	48375259	48381227	+	noncoding	AC090115.1	lncRNA	SENSE	ENSG00000257735	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_12q13.11	HERV	HML1	prototype	chr12	48506813	48511786	+	noncoding	AC089987.1	transcribed_processed_pseudogene	SENSE	ENSG00000197376	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_12q13.11	HERV	HUERSP3B	oneside	chr12	48554336	48557131	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5BS1P	ENSG00000198678	2751	AC089987.1	ENSG00000197376	24439	None	None
ERV316A3_12q13.11b	HERV	ERV316A3	oneside	chr12	48580315	48581942	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LALBA	ENSG00000167531	10249	OR11M1P	ENSG00000224709	45937	None	None
HERVIP10F_12q13.11	HERV	HERVIP10F	oneside	chr12	48600230	48602680	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LALBA	ENSG00000167531	30164	OR11M1P	ENSG00000224709	25199	None	chr12:48602550-48602560
HERVL_12q13.11c	HERV	HERVL	internal	chr12	48628978	48630055	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR11M1P	ENSG00000224709	142	KANSL2	ENSG00000139620	23346	None	None
ERVLB4_12q13.12a	HERV	ERVLB4	oneside	chr12	48897781	48900622	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-600P	ENSG00000199394	5553	AC073610.1	ENSG00000239617	2796	None	None
HARLEQUIN_12q13.12	HERV	HARLEQUIN	oneside	chr12	49734957	49740561	+	coding	TMBIM6	protein_coding	SENSE	ENSG00000139644	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:49738922-49738951
HERVL_12q13.12	HERV	HERVL	oneside	chr12	50322493	50326044	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008147.4	ENSG00000278842	33262	FAM186A	ENSG00000185958	186	None	None
ERVLB4_12q13.12b	HERV	ERVLB4	internal	chr12	50389553	50390784	-	noncoding	FAM186A	protein_coding	SENSE	ENSG00000185958	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr12:50390370-50390601	None
HML3_12q13.12	HERV	HML3	prototype	chr12	50491884	50498846	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DIP2B	ENSG00000066084	6139	LARP4	ENSG00000161813	11880	None	None
MER41_12q13.12	HERV	MER41	prototype	chr12	50765551	50772153	+	coding	ATF1	protein_coding	SENSE	ENSG00000123268	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_12q13.12	HERV	HERVW	prototype	chr12	50902476	50912387	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	METTL7A	ENSG00000185432	11085	TMPRSS12	ENSG00000186452	14592	None	None
MER61_12q13.12	HERV	MER61	internal	chr12	50914752	50921640	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMPRSS12	ENSG00000186452	26868	METTL7A	ENSG00000185432	1832	None	None
ERVLE_12q13.12	HERV	ERVLE	prototype	chr12	50963399	50968352	-	noncoding	HIGD1C	protein_coding	ANTISENSE	ENSG00000214511	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_12q13.13	HERV	HML3	prototype	chr12	51734197	51740272	-	coding	SCN8A	protein_coding	ANTISENSE	ENSG00000196876	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12q13.13	HERV	HERVL	prototype	chr12	51796550	51803499	-	noncoding	SCN8A	protein_coding	ANTISENSE	ENSG00000196876	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_12q13.13	HERV	HERVE	internal	chr12	52116007	52118404	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00592	ENSG00000258279	45711	OR7E47P	ENSG00000257542	7746	None	chr12:52118212-52118228
ERV316A3_12q13.13	HERV	ERV316A3	internal	chr12	52131842	52135265	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR7E47P	ENSG00000257542	23581	LINC00592	ENSG00000258279	28850	None	None
PABLA_12q13.13	HERV	PABLA	prototype	chr12	53106564	53114152	-	noncoding	SOAT2	protein_coding	ANTISENSE	ENSG00000167780	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12q13.13	HERV	ERVLB4	internal	chr12	53642331	53648563	+	coding	ATP5MC2	protein_coding	ANTISENSE	ENSG00000135390	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_12q13.2	HERV	HERVL74	oneside	chr12	54774623	54776746	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VDAC1P5	ENSG00000270858	26000	AC079310.1	ENSG00000257634	87189	None	None
HERVH_12q13.2a	HERV	HERVH	prototype	chr12	54930682	54932632	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TESPA1	ENSG00000135426	15383	MUCL1	ENSG00000172551	34674	None	None
HERVH_12q13.2b	HERV	HERVH	prototype	chr12	54942538	54948366	-	noncoding	TESPA1	protein_coding	SENSE	ENSG00000135426	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
MER61_12q13.2a	HERV	MER61	internal	chr12	55109631	55110435	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR9K1P	ENSG00000196534	2642	NEUROD4	ENSG00000123307	79614	None	None
MER61_12q13.2b	HERV	MER61	oneside	chr12	55172758	55174109	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR9R1P	ENSG00000224622	13035	OR10U1P	ENSG00000227423	19773	None	None
ERVLE_12q13.2a	HERV	ERVLE	internal	chr12	55253167	55254331	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR6C69P	ENSG00000213451	8208	OR6C74	ENSG00000197706	4865	None	None
HERVL40_12q13.2	HERV	HERVL40	internal	chr12	55257492	55258323	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR6C74	ENSG00000197706	9190	OR6C69P	ENSG00000213451	4216	None	None
ERVLE_12q13.2b	HERV	ERVLE	internal	chr12	55511647	55513904	-	noncoding	AC122685.1	lncRNA	SENSE	ENSG00000258763	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12q13.2c	HERV	ERVLE	internal	chr12	55527162	55527868	+	noncoding	AC122685.1	lncRNA	ANTISENSE	ENSG00000258763	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12q13.2d	HERV	ERVLE	internal	chr12	55584592	55585263	+	noncoding	AC122685.1	lncRNA	ANTISENSE	ENSG00000258763	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12q13.2a	HERV	ERVLB4	internal	chr12	55624432	55628496	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR10P1	ENSG00000175398	8364	OR6U2P	ENSG00000272937	8554	None	None
ERVLB4_12q13.2b	HERV	ERVLB4	internal	chr12	55642877	55643624	+	noncoding	AC009779.6	lncRNA	ANTISENSE	ENSG00000258921	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr12:55642940-55642962
MER61_12q13.3	HERV	MER61	internal	chr12	56398017	56398510	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC024884.2	ENSG00000276272	13434	AC025574.1	ENSG00000259099	15306	None	None
HERVL_12q13.3	HERV	HERVL	oneside	chr12	56398527	56405145	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC025574.1	ENSG00000259099	15816	AC024884.2	ENSG00000276272	6799	None	None
LTR19_12q13.3	HERV	LTR19	internal	chr12	56405357	56406961	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC024884.2	ENSG00000276272	4983	AC025574.1	ENSG00000259099	22646	None	None
HML4_12q13.3	HERV	HML4	oneside	chr12	56497590	56501724	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HSPD1P4	ENSG00000257576	9278	GLS2	ENSG00000135423	9176	None	None
HERVFRD_12q13.3	HERV	HERVFRD	prototype	chr12	56830706	56837966	-	noncoding	AC121758.2	transcribed_processed_pseudogene	ANTISENSE	ENSG00000258679	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_12q13.3	HERV	MER101	oneside	chr12	56865446	56871454	-	noncoding	AC121758.2	transcribed_processed_pseudogene	ANTISENSE	ENSG00000258679	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVW_12q13.3	HERV	HERVW	internal	chr12	56967072	56968594	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026120.1	ENSG00000278399	12617	RDH16	ENSG00000139547	7698	None	None
MER4_12q13.3a	HERV	MER4	oneside	chr12	57640676	57646460	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	B4GALNT1	ENSG00000135454	7437	RPL13AP23	ENSG00000242990	28205	None	None
MER4_12q13.3b	HERV	MER4	oneside	chr12	57652500	57657341	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	B4GALNT1	ENSG00000135454	19261	RPL13AP23	ENSG00000242990	17324	None	None
ERVLE_12q14.1a	HERV	ERVLE	oneside	chr12	58066160	58068559	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084033.2	ENSG00000257668	81399	LINC02403	ENSG00000257541	19333	None	None
ERVL_12q14.1a	HERV	ERVL	oneside	chr12	58150279	58152949	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL21P103	ENSG00000241423	91429	AC090643.2	ENSG00000279411	44344	None	None
ERVL_12q14.1b	HERV	ERVL	oneside	chr12	58153040	58156523	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL21P103	ENSG00000241423	87855	AC090643.2	ENSG00000279411	47105	None	None
HML2_12q14.1	HERV	HML2	prototype	chr12	58327459	58336915	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC025578.1	ENSG00000258133	57681	RPL21P103	ENSG00000241423	82594	None	None
MER41_12q14.1	HERV	MER41	oneside	chr12	58412387	58414002	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC020637.1	ENSG00000258231	130122	AC025578.1	ENSG00000258133	17249	None	None
ERV316A3_12q14.1a	HERV	ERV316A3	oneside	chr12	58555574	58556952	-	noncoding	AC020637.1	lncRNA	ANTISENSE	ENSG00000258231	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_12q14.1	HERV	HERVW	prototype	chr12	58851865	58859752	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LRIG3	ENSG00000139263	12397	AC020637.1	ENSG00000258231	38805	None	None
HERVH_12q14.1a	HERV	HERVH	oneside	chr12	59101644	59107080	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068305.2	ENSG00000257443	37406	AC046129.1	ENSG00000286351	22431	None	chr12:59102129-59102134,chr12:59102143-59102154,chr12:59102039-59102086,chr12:59102177-59102182
HERVH_12q14.1b	HERV	HERVH	prototype	chr12	59323188	59328986	-	noncoding	AC108721.2	lncRNA	ANTISENSE	ENSG00000286279	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr12:59327751-59327759,chr12:59327896-59327902
HERVL40_12q14.1	HERV	HERVL40	oneside	chr12	59407773	59409011	-	noncoding	AC108721.2,AC108721.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000286279,ENSG00000258214	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_12q14.1	HERV	HERV9	prototype	chr12	59470933	59476217	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-871P	ENSG00000251931	20161	LINC02448	ENSG00000257230	47061	None	None
HERVL_12q14.1a	HERV	HERVL	prototype	chr12	59518222	59519989	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02448	ENSG00000257230	3289	RNU6-871P	ENSG00000251931	67450	None	None
HERVL_12q14.1b	HERV	HERVL	prototype	chr12	59569475	59573542	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU4-20P	ENSG00000202471	13251	LINC02448	ENSG00000257230	45291	None	None
ERV316A3_12q14.1b	HERV	ERV316A3	internal	chr12	59584092	59586722	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU4-20P	ENSG00000202471	71	LINC02448	ENSG00000257230	59908	None	None
ERVLE_12q14.1b	HERV	ERVLE	internal	chr12	59820887	59821589	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079905.1	ENSG00000237176	8311	AC080011.1	ENSG00000257294	271275	None	None
ERVLE_12q14.1c	HERV	ERVLE	internal	chr12	59902666	59904788	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079905.1	ENSG00000237176	90090	AC080011.1	ENSG00000257294	188076	None	None
ERVLB4_12q14.1a	HERV	ERVLB4	internal	chr12	59982520	59983125	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079905.1	ENSG00000237176	169944	AC080011.1	ENSG00000257294	109739	None	None
HERVFRD_12q14.1	HERV	HERVFRD	oneside	chr12	60295062	60301961	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087883.2	ENSG00000287014	25376	AC130406.1	ENSG00000252607	39863	None	None
MER61_12q14.1a	HERV	MER61	oneside	chr12	60387288	60391284	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090022.2	ENSG00000257865	27699	AC090022.1	ENSG00000251822	23353	chr12:60388101-60388213	None
HERVL_12q14.1c	HERV	HERVL	prototype	chr12	60636517	60638792	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090022.2	ENSG00000257865	217224	AC090017.1	ENSG00000257308	592367	None	None
HUERSP3_12q14.1a	HERV	HUERSP3	prototype	chr12	60643108	60649627	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090017.1	ENSG00000257308	581532	AC090022.2	ENSG00000257865	223815	None	None
ERV316A3_12q14.1c	HERV	ERV316A3	oneside	chr12	60798354	60801847	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090017.1	ENSG00000257308	429312	AC090022.2	ENSG00000257865	379061	None	None
ERVLB4_12q14.1b	HERV	ERVLB4	internal	chr12	60838669	60840173	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090017.1	ENSG00000257308	390986	AC090022.2	ENSG00000257865	419376	None	None
HERVH_12q14.1c	HERV	HERVH	prototype	chr12	60951268	60957619	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090017.1	ENSG00000257308	273540	AC090022.2	ENSG00000257865	531975	None	None
HERVL_12q14.1d	HERV	HERVL	prototype	chr12	61121194	61124512	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090022.2	ENSG00000257865	701901	AC090017.1	ENSG00000257308	106647	None	None
ERVLE_12q14.1d	HERV	ERVLE	internal	chr12	61132269	61134102	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090022.2	ENSG00000257865	712976	AC090017.1	ENSG00000257308	97057	None	None
HUERSP3_12q14.1b	HERV	HUERSP3	internal	chr12	61148860	61150491	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090022.2	ENSG00000257865	729567	AC090017.1	ENSG00000257308	80668	None	None
HERVL_12q14.1e	HERV	HERVL	oneside	chr12	61249675	61253789	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DUX4L52	ENSG00000258336	346278	AC090017.1	ENSG00000257308	16738	None	None
ERVLE_12q14.1e	HERV	ERVLE	internal	chr12	61432366	61434627	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090017.1	ENSG00000257308	199429	DUX4L52	ENSG00000258336	165440	None	None
HERVH_12q14.1d	HERV	HERVH	prototype	chr12	61587106	61592931	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090017.1	ENSG00000257308	354169	DUX4L52	ENSG00000258336	7136	None	None
MER61_12q14.1b	HERV	MER61	prototype	chr12	61693875	61699920	+	noncoding	AC090629.1	lncRNA	ANTISENSE	ENSG00000286402	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12q14.1d	HERV	ERV316A3	oneside	chr12	62216000	62217837	+	noncoding	TAFA2	protein_coding	ANTISENSE	ENSG00000198673	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12q14.1e	HERV	ERV316A3	oneside	chr12	62251539	62253373	-	noncoding	TAFA2	protein_coding	SENSE	ENSG00000198673	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:62252996-62253000,chr12:62252703-62252731
HERVH_12q14.2	HERV	HERVH	oneside	chr12	62758771	62760761	+	noncoding	PPM1H	protein_coding	ANTISENSE	ENSG00000111110	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12q14.2	HERV	ERVLE	internal	chr12	63075897	63079683	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RSL24D1P5	ENSG00000257664	20132	AVPR1A	ENSG00000166148	63076	None	None
ERVLB4_12q14.2	HERV	ERVLB4	oneside	chr12	63384937	63385974	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DPY19L2	ENSG00000177990	172939	AC026116.1	ENSG00000258117	24900	None	None
HERVL18_12q14.2	HERV	HERVL18	oneside	chr12	63397783	63401356	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026116.1	ENSG00000258117	37746	DPY19L2	ENSG00000177990	157557	None	None
PRIMA4_12q14.2	HERV	PRIMA4	internal	chr12	63401900	63406219	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DPY19L2	ENSG00000177990	152694	AC026116.1	ENSG00000258117	41863	None	None
HERVL_12q14.2a	HERV	HERVL	prototype	chr12	64129134	64136221	-	noncoding	SRGAP1,AC025576.3	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000196935,ENSG00000287618	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr12:64130536-64130655	None
HERVL_12q14.2b	HERV	HERVL	prototype	chr12	64339856	64346520	-	noncoding	AC012158.1,C12orf56	transcribed_processed_pseudogene,protein_coding	ANTISENSE,SENSE	ENSG00000243024,ENSG00000185306	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_12q14.2	HERV	MER61	oneside	chr12	64347628	64352825	+	noncoding	AC012158.1,C12orf56	transcribed_processed_pseudogene,protein_coding	SENSE,ANTISENSE	ENSG00000243024,ENSG00000185306	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12q14.2	HERV	ERV316A3	prototype	chr12	64555954	64561190	-	noncoding	RASSF3	protein_coding	ANTISENSE	ENSG00000153179	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12q14.3a	HERV	ERV316A3	internal	chr12	64767289	64768073	+	noncoding	AC025262.1	lncRNA	SENSE	ENSG00000215159	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12q14.3b	HERV	ERV316A3	internal	chr12	64771136	64772424	+	noncoding	AC025262.1	lncRNA	SENSE	ENSG00000215159	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_12q14.3	HERV	MER34B	oneside	chr12	65189570	65195916	-	noncoding	LEMD3	protein_coding	ANTISENSE	ENSG00000174106	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12q14.3a	HERV	ERVLE	internal	chr12	66256833	66258223	-	noncoding	AC078889.1	lncRNA	SENSE	ENSG00000256072	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12q14.3b	HERV	ERVLE	internal	chr12	67218572	67222948	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GGTA2P	ENSG00000237766	42894	RAB11AP2	ENSG00000255976	86367	None	None
LTR57_12q14.3	HERV	LTR57	internal	chr12	67258000	67259244	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAB11AP2	ENSG00000255976	125795	GGTA2P	ENSG00000237766	6598	None	None
MER4_12q14.3	HERV	MER4	internal	chr12	67259639	67262746	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAB11AP2	ENSG00000255976	127434	GGTA2P	ENSG00000237766	3096	None	None
ERVL_12q15	HERV	ERVL	prototype	chr12	67620069	67626465	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02408	ENSG00000203585	29298	DYRK2	ENSG00000127334	21873	None	None
HUERSP3B_12q15	HERV	HUERSP3B	prototype	chr12	67713210	67714735	+	noncoding	LINC02421	lncRNA	ANTISENSE	ENSG00000255970	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_12q15a	HERV	HERVH	prototype	chr12	67766804	67772346	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01479	ENSG00000255772	156889	AC022513.1	ENSG00000279505	12987	None	None
MER4B_12q15a	HERV	MER4B	internal	chr12	68462340	68463620	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008033.1	ENSG00000256075	10121	LINC02384	ENSG00000251301	10677	None	None
HARLEQUIN_12q15	HERV	HARLEQUIN	prototype	chr12	68540228	68547978	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008033.2	ENSG00000256917	52365	RPSAP12	ENSG00000240087	5017	None	None
MER4B_12q15b	HERV	MER4B	oneside	chr12	69139518	69143430	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CPM	ENSG00000135678	167948	AC127894.1	ENSG00000258140	68678	None	None
MER4B_12q15c	HERV	MER4B	internal	chr12	69143783	69146662	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CPM	ENSG00000135678	172213	AC127894.1	ENSG00000258140	65446	None	None
MER4_12q15a	HERV	MER4	prototype	chr12	69185979	69192204	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CPM	ENSG00000135678	214409	AC127894.1	ENSG00000258140	19904	None	None
HML1_12q15a	HERV	HML1	internal	chr12	69201147	69203311	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CPM	ENSG00000135678	229577	AC127894.1	ENSG00000258140	8797	None	None
HML5_12q15	HERV	HML5	prototype	chr12	69328937	69332487	-	noncoding	AC020656.2	lncRNA	SENSE	ENSG00000274979	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr12:69329868-69330258,chr12:69331089-69331306,chr12:69331352-69332005	chr12:69331170-69331177,chr12:69331739-69331752,chr12:69332293-69332309
HERVI_12q15	HERV	HERVI	internal	chr12	69644373	69645310	-	noncoding	BEST3	protein_coding	SENSE	ENSG00000127325	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_12q15b	HERV	HERVH	prototype	chr12	70085290	70090295	+	noncoding	CNOT2-DT	lncRNA	ANTISENSE	ENSG00000257815	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_12q15c	HERV	HERVH	oneside	chr12	70131269	70132796	-	noncoding	CNOT2-DT	lncRNA	SENSE	ENSG00000257815	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_12q15b	HERV	MER4	oneside	chr12	70150246	70151848	+	noncoding	CNOT2-DT	lncRNA	ANTISENSE	ENSG00000257815	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_12q15c	HERV	MER4	oneside	chr12	70151862	70158952	+	noncoding	CNOT2-DT	lncRNA	ANTISENSE	ENSG00000257815	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12q15	HERV	ERVLE	internal	chr12	70390243	70390993	-	noncoding	KCNMB4	protein_coding	ANTISENSE	ENSG00000135643	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_12q15b	HERV	HML1	internal	chr12	70445315	70448869	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025569.1	ENSG00000258168	19211	RNU4-65P	ENSG00000222405	1392	None	None
MER61_12q15a	HERV	MER61	oneside	chr12	70467962	70472019	+	noncoding	AC025569.1	lncRNA	SENSE	ENSG00000258168	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:70468073-70468088,chr12:70468171-70468195,chr12:70468120-70468131
MER61_12q15b	HERV	MER61	oneside	chr12	70475877	70477210	+	noncoding	AC025569.1	lncRNA	SENSE	ENSG00000258168	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_12q15	HERV	PABLA	internal	chr12	70488438	70490816	-	noncoding	AC025569.1	lncRNA	ANTISENSE	ENSG00000258168	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_12q15	HERV	MER41	oneside	chr12	70498692	70499577	-	noncoding	AC025569.1	lncRNA	ANTISENSE	ENSG00000258168	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_12q21.1	HERV	MER41	internal	chr12	71206303	71207428	+	noncoding	TSPAN8	protein_coding	ANTISENSE	ENSG00000127324	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12q21.1a	HERV	ERVLE	internal	chr12	72162764	72167954	+	coding	TPH2,TRHDE	protein_coding,protein_coding	SENSE,SENSE	ENSG00000139287,ENSG00000072657	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:72162919-72162921
ERVLE_12q21.1b	HERV	ERVLE	internal	chr12	72189371	72191147	+	noncoding	TRHDE	protein_coding	SENSE	ENSG00000072657	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12q21.1c	HERV	ERVLE	internal	chr12	72546096	72546639	-	noncoding	TRHDE	protein_coding	ANTISENSE	ENSG00000072657	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12q21.1d	HERV	ERVLE	internal	chr12	72701908	72703108	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRHDE	ENSG00000072657	31150	AC133480.1	ENSG00000258235	24815	None	None
HERVH_12q21.1a	HERV	HERVH	prototype	chr12	72703222	72708969	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRHDE	ENSG00000072657	32464	AC133480.1	ENSG00000258235	18954	None	None
HERVH_12q21.1b	HERV	HERVH	prototype	chr12	72709003	72714311	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC133480.1	ENSG00000258235	13612	TRHDE	ENSG00000072657	38245	None	None
ERVLE_12q21.1e	HERV	ERVLE	internal	chr12	72714391	72715105	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRHDE	ENSG00000072657	43633	AC133480.1	ENSG00000258235	12818	None	None
HARLEQUIN_12q21.1	HERV	HARLEQUIN	prototype	chr12	72818310	72824798	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090503.2	ENSG00000258294	291159	AC133480.1	ENSG00000258235	89466	None	None
HERVH_12q21.1c	HERV	HERVH	prototype	chr12	73001848	73007727	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090503.2	ENSG00000258294	108230	AC133480.1	ENSG00000258235	273004	None	None
MER4_12q21.1a	HERV	MER4	oneside	chr12	73162036	73163854	+	noncoding	LINC02444	lncRNA	SENSE	ENSG00000258123	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_12q21.1b	HERV	MER4	internal	chr12	73163905	73167915	+	noncoding	LINC02444	lncRNA	SENSE	ENSG00000258123	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_12q21.1	HERV	LTR19	internal	chr12	73169614	73170661	+	noncoding	LINC02444	lncRNA	SENSE	ENSG00000258123	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12q21.1a	HERV	HERVL	prototype	chr12	73250847	73257054	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02444	ENSG00000258123	42530	AC087879.1	ENSG00000243164	391612	None	None
ERVLE_12q21.1f	HERV	ERVLE	internal	chr12	73809028	73813890	+	noncoding	LINC02445	lncRNA	SENSE	ENSG00000257750	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12q21.1b	HERV	HERVL	prototype	chr12	73825650	73832268	+	noncoding	LINC02445,AC090015.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000257750,ENSG00000251138	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12q21.1g	HERV	ERVLE	oneside	chr12	73879929	73882967	-	noncoding	AC090015.1	lncRNA	SENSE	ENSG00000251138	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12q21.1c	HERV	HERVL	oneside	chr12	74034877	74040505	+	noncoding	AC090015.1,LINC02394	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000251138,ENSG00000258332	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_12q21.1d	HERV	HERVL	internal	chr12	74063872	74066600	+	noncoding	AC090015.1	lncRNA	ANTISENSE	ENSG00000251138	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12q21.1e	HERV	HERVL	oneside	chr12	74109996	74111135	-	noncoding	AC090015.1	lncRNA	SENSE	ENSG00000251138	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_12q21.1	HERV	MER34B	internal	chr12	74223550	74223894	+	noncoding	AC090015.1	lncRNA	ANTISENSE	ENSG00000251138	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12q21.1a	HERV	ERVLB4	oneside	chr12	74230415	74237386	+	noncoding	AC090015.1	lncRNA	ANTISENSE	ENSG00000251138	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVEA_12q21.1	HERV	HERVEA	prototype	chr12	74264309	74273021	+	noncoding	AC090015.1,AC090502.2	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000251138,ENSG00000257183	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_12q21.1f	HERV	HERVL	prototype	chr12	74275777	74282432	+	noncoding	AC090015.1,AC090502.2	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000251138,ENSG00000257183	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_12q21.1	HERV	HUERSP2	prototype	chr12	74386671	74392035	-	noncoding	AC090015.1	lncRNA	SENSE	ENSG00000251138	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12q21.1	HERV	ERV316A3	oneside	chr12	74421901	74426024	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATXN7L3B	ENSG00000253719	111811	AC090015.1	ENSG00000251138	19301	None	None
ERVL_12q21.1	HERV	ERVL	oneside	chr12	74618916	74620489	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATXN7L3B	ENSG00000253719	73486	AC123904.2	ENSG00000257323	36072	None	None
ERVLE_12q21.1h	HERV	ERVLE	internal	chr12	74793768	74796139	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC123904.3	ENSG00000257998	64917	AC073525.1	ENSG00000257434	224830	None	None
HERVL_12q21.1g	HERV	HERVL	oneside	chr12	75012443	75015835	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC123904.3	ENSG00000257998	283592	AC073525.1	ENSG00000257434	5134	None	None
MER61_12q21.1	HERV	MER61	prototype	chr12	75015836	75020645	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073525.1	ENSG00000257434	324	AC123904.3	ENSG00000257998	286985	None	None
ERVLB4_12q21.1b	HERV	ERVLB4	prototype	chr12	75030969	75037864	+	noncoding	AC073525.1	lncRNA	SENSE	ENSG00000257434	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_12q21.2	HERV	MER4B	oneside	chr12	75363706	75367277	-	noncoding	CAPS2,GLIPR1L1	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000180881,ENSG00000173401	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:75366934-75366949
HERVL_12q21.2a	HERV	HERVL	prototype	chr12	75371001	75377839	-	noncoding	CAPS2	protein_coding	SENSE	ENSG00000180881	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12q21.2	HERV	ERV316A3	internal	chr12	75438779	75443358	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GLIPR1	ENSG00000139278	37395	GLIPR1L2	ENSG00000180481	6091	None	None
HERVH_12q21.2a	HERV	HERVH	prototype	chr12	76291720	76297783	+	noncoding	LNCOG	lncRNA	SENSE	ENSG00000257219	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12q21.2	HERV	ERVLB4	oneside	chr12	76501476	76504298	+	noncoding	OSBPL8	protein_coding	ANTISENSE	ENSG00000091039	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr12:76504083-76504087
ERVLE_12q21.2	HERV	ERVLE	internal	chr12	76593345	76595170	-	noncoding	AC107032.2,AC107032.3	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000257526,ENSG00000287030	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV30_12q21.2	HERV	HERV30	prototype	chr12	76692426	76698034	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P43	ENSG00000241045	23500	AC107032.1	ENSG00000243071	31542	None	None
ERVL_12q21.2	HERV	ERVL	internal	chr12	76744149	76747459	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P43	ENSG00000241045	21863	AC093014.1	ENSG00000258090	9732	None	None
HERVP71A_12q21.2	HERV	HERVP71A	oneside	chr12	76803322	76804899	+	noncoding	ZDHHC17	protein_coding	SENSE	ENSG00000186908	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr12:76804776-76804785,chr12:76804828-76804838
MER61_12q21.2	HERV	MER61	internal	chr12	77181253	77182998	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02464	ENSG00000257677	36605	AC079030.1	ENSG00000286476	17615	None	None
MER101_12q21.2	HERV	MER101	internal	chr12	77642091	77644073	-	noncoding	NAV3	protein_coding	ANTISENSE	ENSG00000067798	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12q21.2b	HERV	HERVL	internal	chr12	79490175	79493547	-	noncoding	AC027288.3	lncRNA	SENSE	ENSG00000257894	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12q21.2c	HERV	HERVL	oneside	chr12	79497318	79500000	-	noncoding	AC027288.3	lncRNA	SENSE	ENSG00000257894	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_12q21.2b	HERV	HERVH	prototype	chr12	79539848	79545625	+	noncoding	AC027288.1	lncRNA	SENSE	ENSG00000257474	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_12q21.31a	HERV	MER41	oneside	chr12	80173186	80174513	-	noncoding	OTOGL	protein_coding	ANTISENSE	ENSG00000165899	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_12q21.31	HERV	HERVH	prototype	chr12	80783123	80788892	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LIN7A	ENSG00000111052	3628	LINC01490	ENSG00000257741	12406	None	None
ERVLE_12q21.31a	HERV	ERVLE	internal	chr12	80993021	80995854	+	noncoding	ACSS3	protein_coding	SENSE	ENSG00000111058	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_12q21.31b	HERV	MER41	oneside	chr12	81209550	81210955	-	noncoding	ACSS3	protein_coding	ANTISENSE	ENSG00000111058	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12q21.31a	HERV	HERVL	oneside	chr12	81564474	81565559	+	noncoding	PPFIA2	protein_coding	ANTISENSE	ENSG00000139220	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_12q21.31a	HERV	ERVL	internal	chr12	81762708	81767744	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPFIA2	ENSG00000139220	3155	AC091515.1	ENSG00000257609	100624	None	None
ERV316A3_12q21.31a	HERV	ERV316A3	internal	chr12	81825332	81826437	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091515.1	ENSG00000257609	41931	PPFIA2	ENSG00000139220	65779	None	None
HERVL_12q21.31b	HERV	HERVL	oneside	chr12	81890277	81895093	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091515.1	ENSG00000257609	21231	LINC02426	ENSG00000257747	58626	None	None
HERV9_12q21.31	HERV	HERV9	prototype	chr12	81896396	81905688	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC091515.1	ENSG00000257609	27350	LINC02426	ENSG00000257747	48031	None	None
HERVL_12q21.31c	HERV	HERVL	prototype	chr12	81933732	81942476	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02426	ENSG00000257747	11243	AC091515.1	ENSG00000257609	64686	None	None
ERV316A3_12q21.31b	HERV	ERV316A3	internal	chr12	81996637	82000175	+	noncoding	AC011602.1	processed_pseudogene	SENSE	ENSG00000258193	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12q21.31c	HERV	ERV316A3	oneside	chr12	82005506	82009632	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011602.1	ENSG00000258193	6544	CCDC59	ENSG00000133773	214049	None	None
ERV316A3_12q21.31d	HERV	ERV316A3	oneside	chr12	82115944	82118468	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC59	ENSG00000133773	105213	AC011602.1	ENSG00000258193	116982	None	None
HERVL_12q21.31d	HERV	HERVL	oneside	chr12	82192080	82195317	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011602.1	ENSG00000258193	193118	CCDC59	ENSG00000133773	28364	None	None
HERVL_12q21.31e	HERV	HERVL	prototype	chr12	82202875	82208540	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC59	ENSG00000133773	15141	AC011602.1	ENSG00000258193	203913	None	None
HERVFRD_12q21.31a	HERV	HERVFRD	oneside	chr12	82656196	82661226	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC091214.1	ENSG00000286043	11844	AC089998.1	ENSG00000257431	140379	None	None
ERVLB4_12q21.31a	HERV	ERVLB4	oneside	chr12	83147274	83148071	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL6P25	ENSG00000213270	3260	TMTC2	ENSG00000179104	12404	None	None
ERV316A3_12q21.31e	HERV	ERV316A3	oneside	chr12	83188491	83190372	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090680.1	ENSG00000258338	15751	AC093025.1	ENSG00000257124	470637	None	None
HERVL_12q21.31f	HERV	HERVL	oneside	chr12	83281467	83283866	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093025.1	ENSG00000257124	377143	AC090680.1	ENSG00000258338	108727	None	None
ERVLB4_12q21.31b	HERV	ERVLB4	internal	chr12	83350981	83351673	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093025.1	ENSG00000257124	309336	AC090680.1	ENSG00000258338	178241	None	None
ERVLE_12q21.31b	HERV	ERVLE	internal	chr12	83351756	83354379	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093025.1	ENSG00000257124	306630	AC090680.1	ENSG00000258338	179016	None	None
HERVL_12q21.31g	HERV	HERVL	internal	chr12	83503122	83510258	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090680.1	ENSG00000258338	330382	AC093025.1	ENSG00000257124	150751	None	None
HERVL_12q21.31h	HERV	HERVL	prototype	chr12	83719369	83726439	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093025.1	ENSG00000257124	57650	AC090679.3	ENSG00000285191	420865	None	None
MER61_12q21.31a	HERV	MER61	oneside	chr12	83827691	83828990	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090679.3	ENSG00000285191	318314	AC093025.1	ENSG00000257124	165972	None	None
MER61_12q21.31b	HERV	MER61	internal	chr12	83832645	83834929	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090679.3	ENSG00000285191	312375	AC093025.1	ENSG00000257124	170926	None	None
ERVLE_12q21.31c	HERV	ERVLE	internal	chr12	83876275	83878069	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090679.3	ENSG00000285191	269235	AC093025.1	ENSG00000257124	214556	None	None
HERVK11_12q21.31	HERV	HERVK11	oneside	chr12	84102186	84109415	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090679.3	ENSG00000285191	37889	AC093025.1	ENSG00000257124	440467	None	None
ERV316A3_12q21.31f	HERV	ERV316A3	oneside	chr12	84118022	84119384	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093025.1	ENSG00000257124	456303	AC090679.3	ENSG00000285191	27920	None	None
HERVL18_12q21.31	HERV	HERVL18	prototype	chr12	84355652	84359232	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090679.2	ENSG00000257729	61090	AC087888.1	ENSG00000258358	89393	None	None
HERVL_12q21.31i	HERV	HERVL	prototype	chr12	84401804	84408177	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090679.2	ENSG00000257729	107242	AC087888.1	ENSG00000258358	40448	None	None
HERVFRD_12q21.31b	HERV	HERVFRD	prototype	chr12	84502043	84509596	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093027.1	ENSG00000257296	162002	AC087888.1	ENSG00000258358	52165	chr12:84508829-84509264	None
ERVLE_12q21.31d	HERV	ERVLE	internal	chr12	84566058	84570322	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093027.1	ENSG00000257296	101276	AC087888.1	ENSG00000258358	116180	None	None
HERVW_12q21.31	HERV	HERVW	prototype	chr12	84793972	84798674	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093027.1	ENSG00000257296	121946	SLC6A15	ENSG00000072041	60817	None	None
HERVL40_12q21.31	HERV	HERVL40	oneside	chr12	85145470	85148025	-	noncoding	LRRIQ1	protein_coding	ANTISENSE	ENSG00000133640	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12q21.31j	HERV	HERVL	oneside	chr12	85167243	85170415	-	noncoding	LRRIQ1	protein_coding	ANTISENSE	ENSG00000133640	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr12:85168965-85168993
ERV316A3_12q21.31g	HERV	ERV316A3	internal	chr12	85926032	85927430	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NTS	ENSG00000133636	43040	MGAT4C	ENSG00000182050	28236	None	None
HERVL_12q21.31k	HERV	HERVL	prototype	chr12	85937013	85940309	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NTS	ENSG00000133636	54021	MGAT4C	ENSG00000182050	15357	None	None
HERVL_12q21.31l	HERV	HERVL	oneside	chr12	86076851	86078894	-	noncoding	MGAT4C	protein_coding	SENSE	ENSG00000182050	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_12q21.31b	HERV	ERVL	internal	chr12	86117465	86118061	+	noncoding	MGAT4C	protein_coding	ANTISENSE	ENSG00000182050	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12q21.31c	HERV	ERVLB4	oneside	chr12	86190676	86192672	+	noncoding	MGAT4C	protein_coding	ANTISENSE	ENSG00000182050	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12q21.32a	HERV	HERVL	unknown	chr12	86561263	86568603	+	noncoding	MGAT4C	protein_coding	ANTISENSE	ENSG00000182050	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_12q21.32a	HERV	HERVH	prototype	chr12	86938682	86944755	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010196.1	ENSG00000258185	99684	AC079597.1	ENSG00000280049	97161	None	None
MER4B_12q21.32	HERV	MER4B	internal	chr12	86995796	86996652	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010196.1	ENSG00000258185	156798	AC079597.1	ENSG00000280049	45264	None	None
MER4_12q21.32a	HERV	MER4	internal	chr12	86996716	86997414	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010196.1	ENSG00000258185	157718	AC079597.1	ENSG00000280049	44502	None	None
MER4_12q21.32b	HERV	MER4	internal	chr12	86999949	87001329	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010196.1	ENSG00000258185	160951	AC079597.1	ENSG00000280049	40587	None	None
ERV316A3_12q21.32a	HERV	ERV316A3	oneside	chr12	87031327	87035070	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079597.1	ENSG00000280049	6846	AC010196.1	ENSG00000258185	192329	None	None
ERVLE_12q21.32a	HERV	ERVLE	internal	chr12	87036469	87037632	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010196.1	ENSG00000258185	197471	AC079597.1	ENSG00000280049	4284	None	None
MER101_12q21.32	HERV	MER101	oneside	chr12	87385878	87388051	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL23AP68	ENSG00000242850	215449	AC079598.4	ENSG00000258205	358516	None	None
ERV316A3_12q21.32b	HERV	ERV316A3	internal	chr12	87435450	87436637	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079598.4	ENSG00000258205	309930	RPL23AP68	ENSG00000242850	265021	None	None
ERVL_12q21.32	HERV	ERVL	internal	chr12	87497973	87499996	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079598.4	ENSG00000258205	246571	RPL23AP68	ENSG00000242850	327544	None	None
ERVLB4_12q21.32a	HERV	ERVLB4	oneside	chr12	87500003	87501311	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079598.4	ENSG00000258205	245256	RPL23AP68	ENSG00000242850	329574	None	None
ERVLE_12q21.32b	HERV	ERVLE	internal	chr12	87604302	87606496	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079598.4	ENSG00000258205	140071	RPL23AP68	ENSG00000242850	433873	None	None
ERVLB4_12q21.32b	HERV	ERVLB4	prototype	chr12	87617220	87623269	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079598.4	ENSG00000258205	123298	RPL23AP68	ENSG00000242850	446791	None	None
HERV4_12q21.32	HERV	HERV4	oneside	chr12	87666888	87670837	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079598.4	ENSG00000258205	75730	RPL23AP68	ENSG00000242850	496459	None	chr12:87670495-87670506,chr12:87670513-87670529
ERV316A3_12q21.32c	HERV	ERV316A3	internal	chr12	87673896	87675881	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079598.4	ENSG00000258205	70686	RPL23AP68	ENSG00000242850	503467	None	None
HERVL74_12q21.32	HERV	HERVL74	oneside	chr12	87692809	87695370	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079598.4	ENSG00000258205	51197	RPL23AP68	ENSG00000242850	522380	None	None
ERVLB4_12q21.32c	HERV	ERVLB4	oneside	chr12	87713791	87717073	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079598.4	ENSG00000258205	29494	RPL23AP68	ENSG00000242850	543362	None	None
ERVLE_12q21.32c	HERV	ERVLE	oneside	chr12	87885689	87887201	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS4XP15	ENSG00000240721	57684	AC079598.3	ENSG00000258179	64771	None	None
HERVH_12q21.32b	HERV	HERVH	prototype	chr12	87907290	87912900	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS4XP15	ENSG00000240721	31985	AC079598.3	ENSG00000258179	86372	None	None
ERVLB4_12q21.32d	HERV	ERVLB4	oneside	chr12	87975672	87977586	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS4XP15	ENSG00000240721	24853	C12orf50	ENSG00000165805	2449	None	None
HML5_12q21.32	HERV	HML5	prototype	chr12	88179572	88184538	-	noncoding	TMTC3	protein_coding	ANTISENSE	ENSG00000139324	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12q21.32b	HERV	HERVL	prototype	chr12	88209905	88212394	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC129416.1	ENSG00000199245	218048	TMTC3	ENSG00000139324	10018	None	None
HERVH48_12q21.32	HERV	HERVH48	prototype	chr12	88227290	88235601	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMTC3	ENSG00000139324	27403	AC129416.1	ENSG00000199245	194841	chr12:88227473-88227554	None
ERVLE_12q21.32d	HERV	ERVLE	internal	chr12	88264639	88266000	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMTC3	ENSG00000139324	64752	AC129416.1	ENSG00000199245	164442	None	None
HERVH_12q21.32c	HERV	HERVH	oneside	chr12	88368038	88371980	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMTC3	ENSG00000139324	168151	AC129416.1	ENSG00000199245	58462	None	None
MER4_12q21.32c	HERV	MER4	internal	chr12	88386264	88387344	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC129416.1	ENSG00000199245	43098	TMTC3	ENSG00000139324	186377	None	None
LTR57_12q21.33	HERV	LTR57	oneside	chr12	88633943	88635094	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02458	ENSG00000246363	375587	AC024941.1	ENSG00000278011	31748	None	None
ERV316A3_12q21.33a	HERV	ERV316A3	oneside	chr12	88684549	88685659	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC024941.1	ENSG00000278011	82354	LINC02458	ENSG00000246363	325022	None	None
MER4_12q21.33	HERV	MER4	oneside	chr12	88840917	88842205	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02458	ENSG00000246363	168476	AC024941.1	ENSG00000278011	238722	None	None
ERVLE_12q21.33	HERV	ERVLE	internal	chr12	89545405	89547174	-	noncoding	POC1B-AS1	lncRNA	ANTISENSE	ENSG00000270344	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12q21.33a	HERV	ERVLB4	prototype	chr12	89767496	89773655	-	noncoding	AC009522.1	lncRNA	ANTISENSE	ENSG00000258216	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr12:89768995-89769476	chr12:89769440-89769451,chr12:89769458-89769476,chr12:89769160-89769174
ERV316A3_12q21.33b	HERV	ERV316A3	oneside	chr12	90224412	90225221	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC126178.1	ENSG00000257194	111633	LINC02392	ENSG00000258183	55673	None	None
ERV316A3_12q21.33c	HERV	ERV316A3	oneside	chr12	90278138	90284377	-	noncoding	LINC02392	lncRNA	ANTISENSE	ENSG00000258183	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:90280888-90280895
ERV316A3_12q21.33d	HERV	ERV316A3	oneside	chr12	90313121	90315093	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02392	ENSG00000258183	12147	LINC02822	ENSG00000286021	261309	None	None
HERVL_12q21.33a	HERV	HERVL	oneside	chr12	90434294	90436409	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02392	ENSG00000258183	133320	LINC02822	ENSG00000286021	139993	None	None
HERVL_12q21.33b	HERV	HERVL	prototype	chr12	90874461	90881175	+	noncoding	LINC02822	lncRNA	SENSE	ENSG00000286021	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12q21.33e	HERV	ERV316A3	oneside	chr12	90901892	90906167	-	noncoding	CCER1	protein_coding	SENSE	ENSG00000197651	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV9_12q21.33	HERV	HERV9	internal	chr12	90983302	90986518	+	noncoding	EPYC	protein_coding	ANTISENSE	ENSG00000083782	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12q21.33b	HERV	ERVLB4	internal	chr12	91065210	91067201	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LUM	ENSG00000139329	35428	KERA	ENSG00000139330	7227	None	None
ERV316A3_12q21.33f	HERV	ERV316A3	oneside	chr12	91259110	91263274	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02823	ENSG00000258100	63771	AC007115.1	ENSG00000258148	65168	None	None
ERV316A3_12q21.33g	HERV	ERV316A3	internal	chr12	91392804	91394556	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090016.1	ENSG00000286049	29225	LINC02823	ENSG00000258100	24197	None	None
ERV316A3_12q21.33h	HERV	ERV316A3	oneside	chr12	91396327	91399827	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090016.1	ENSG00000286049	23954	LINC02823	ENSG00000258100	27720	None	None
ERV316A3_12q21.33i	HERV	ERV316A3	oneside	chr12	91404424	91409267	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02823	ENSG00000258100	35817	AC090016.1	ENSG00000286049	14514	None	None
ERV316A3_12q21.33j	HERV	ERV316A3	internal	chr12	91562503	91563645	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC126175.1	ENSG00000274647	69267	AC090016.1	ENSG00000286049	135567	None	None
ERV316A3_12q21.33k	HERV	ERV316A3	oneside	chr12	91927995	91929602	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090049.1	ENSG00000257863	21808	LINC01619	ENSG00000257242	55374	None	None
HERV9_12q22a	HERV	HERV9	prototype	chr12	92386713	92394200	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02391	ENSG00000277851	22881	CLLU1OS	ENSG00000205057	25894	None	None
ERVLB4_12q22a	HERV	ERVLB4	internal	chr12	92617232	92619495	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC063949.1	ENSG00000258262	85908	PLEKHG7	ENSG00000187510	83348	None	None
HML6_12q22	HERV	HML6	prototype	chr12	92619913	92622155	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PLEKHG7	ENSG00000187510	80688	AC063949.1	ENSG00000258262	88589	chr12:92621918-92622140	None
ERVL_12q22a	HERV	ERVL	internal	chr12	92709936	92713069	-	noncoding	PLEKHG7	protein_coding	ANTISENSE	ENSG00000187510	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_12q22b	HERV	ERVL	internal	chr12	92713136	92714978	-	noncoding	PLEKHG7	protein_coding	ANTISENSE	ENSG00000187510	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_12q22	HERV	HUERSP1	prototype	chr12	93248752	93255087	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC126172.1	ENSG00000201502	10930	AC138123.1	ENSG00000257322	33073	None	None
MER4B_12q22	HERV	MER4B	internal	chr12	93545453	93546576	-	noncoding	SOCS2-AS1	lncRNA	SENSE	ENSG00000246985	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_12q22	HERV	HML3	prototype	chr12	94355584	94359308	+	noncoding	CEP83	protein_coding	ANTISENSE	ENSG00000173588	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_12q22	HERV	MER101	internal	chr12	94414668	94415554	+	noncoding	CEP83	protein_coding	ANTISENSE	ENSG00000173588	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12q22	HERV	ERV316A3	oneside	chr12	94474303	94477806	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023161.1	ENSG00000257400	13740	CEP83-DT	ENSG00000278916	11819	None	None
ERVLE_12q22	HERV	ERVLE	internal	chr12	94923092	94925507	+	noncoding	NDUFA12	protein_coding	ANTISENSE	ENSG00000184752	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12q22b	HERV	ERVLB4	internal	chr12	94967996	94969412	-	noncoding	NDUFA12	protein_coding	SENSE	ENSG00000184752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_12q22	HERV	MER41	oneside	chr12	95330733	95332133	+	noncoding	AC084879.2	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000257943	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_12q22a	HERV	MER4	oneside	chr12	95388906	95390400	+	noncoding	AC084879.2	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000257943	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_12q22b	HERV	MER4	internal	chr12	95390458	95393565	+	noncoding	AC084879.2	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000257943	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVKC4_12q22	HERV	HERVKC4	internal	chr12	95443408	95444372	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018475.1	ENSG00000241556	23025	AC084879.2	ENSG00000257943	926	None	None
HML5_12q22	HERV	HML5	oneside	chr12	95444445	95448153	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018475.1	ENSG00000241556	19244	AC084879.2	ENSG00000257943	1963	None	None
HERV9_12q22b	HERV	HERV9	oneside	chr12	95448361	95456110	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018475.1	ENSG00000241556	11287	AC084879.2	ENSG00000257943	5879	None	None
ERVLB4_12q22c	HERV	ERVLB4	oneside	chr12	95590717	95592545	+	noncoding	PGAM1P5	transcribed_processed_pseudogene	SENSE	ENSG00000257150	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_12q22	HERV	HERVH	prototype	chr12	95748862	95754890	+	noncoding	NTN4	protein_coding	ANTISENSE	ENSG00000074527	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12q23.1a	HERV	ERVLE	internal	chr12	96482987	96483631	+	noncoding	AC007513.1	lncRNA	ANTISENSE	ENSG00000258272	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12q23.1	HERV	ERV316A3	internal	chr12	96595697	96596281	-	noncoding	CFAP54	protein_coding	ANTISENSE	ENSG00000188596	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12q23.1a	HERV	ERVLB4	internal	chr12	97293595	97296067	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RMST	ENSG00000255794	134817	LINC02409	ENSG00000257920	17386	None	None
HERVL18_12q23.1	HERV	HERVL18	unknown	chr12	98419580	98423971	+	noncoding	AC008055.2	lncRNA	SENSE	ENSG00000286056	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12q23.1b	HERV	ERVLE	internal	chr12	98588488	98590492	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMPO	ENSG00000120802	38109	PPIAP8	ENSG00000225185	231	None	None
MER34B_12q23.1	HERV	MER34B	internal	chr12	99602253	99603053	-	noncoding	ANKS1B	protein_coding	SENSE	ENSG00000185046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_12q23.1	HERV	HERVH	prototype	chr12	99715182	99721737	+	noncoding	ANKS1B	protein_coding	ANTISENSE	ENSG00000185046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12q23.1b	HERV	ERVLB4	internal	chr12	99915516	99916702	+	noncoding	ANKS1B	protein_coding	ANTISENSE	ENSG00000185046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12q23.1c	HERV	ERVLE	internal	chr12	99916729	99918296	+	noncoding	ANKS1B	protein_coding	ANTISENSE	ENSG00000185046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_12q23.1	HERV	HML5	prototype	chr12	100159365	100165461	-	noncoding	GOLGA2P5	transcribed_unprocessed_pseudogene	SENSE	ENSG00000238105	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr12:100164013-100164151	chr12:100159481-100159492
ERVLE_12q23.1d	HERV	ERVLE	internal	chr12	100362836	100368664	-	noncoding	SLC17A8	protein_coding	ANTISENSE	ENSG00000179520	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVEA_12q23.1a	HERV	HERVEA	oneside	chr12	100633105	100636127	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANO4	ENSG00000151572	81399	GAS2L3	ENSG00000139354	4817	None	None
HERVEA_12q23.1b	HERV	HERVEA	oneside	chr12	100642968	100648627	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANO4	ENSG00000151572	68899	GAS2L3	ENSG00000139354	14680	None	None
ERVLE_12q23.1e	HERV	ERVLE	internal	chr12	100866369	100869417	-	noncoding	ANO4	protein_coding	ANTISENSE	ENSG00000151572	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12q23.2a	HERV	ERVLE	internal	chr12	102005493	102008563	+	noncoding	DRAM1	protein_coding	SENSE	ENSG00000136048	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12q23.2a	HERV	ERV316A3	oneside	chr12	102009044	102011228	+	noncoding	DRAM1	protein_coding	SENSE	ENSG00000136048	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_12q23.2a	HERV	MER41	internal	chr12	102305290	102307764	+	noncoding	HELLPAR,LINC02456	lncRNA,lncRNA	SENSE,SENSE	ENSG00000281344,ENSG00000283052	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_12q23.2b	HERV	MER41	internal	chr12	102313769	102314788	+	noncoding	HELLPAR,LINC02456	lncRNA,lncRNA	SENSE,SENSE	ENSG00000281344,ENSG00000283052	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12q23.2a	HERV	ERVLB4	oneside	chr12	102328732	102332097	+	noncoding	HELLPAR,LINC02456	lncRNA,lncRNA	SENSE,SENSE	ENSG00000281344,ENSG00000283052	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12q23.2b	HERV	ERVLE	internal	chr12	102364791	102365894	+	noncoding	HELLPAR,LINC02456	lncRNA,lncRNA	SENSE,SENSE	ENSG00000281344,ENSG00000283052	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_12q23.2	HERV	HUERSP2	internal	chr12	102593272	102596685	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00485	ENSG00000258169	212595	AC010202.1	ENSG00000257254	79617	None	None
ERV316A3_12q23.2b	HERV	ERV316A3	prototype	chr12	102630382	102631485	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00485	ENSG00000258169	177795	AC010202.1	ENSG00000257254	116727	None	None
ERVLB4_12q23.2b	HERV	ERVLB4	prototype	chr12	102653258	102661243	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010202.1	ENSG00000257254	139603	LINC00485	ENSG00000258169	148037	None	None
HML3_12q23.2a	HERV	HML3	oneside	chr12	102661271	102666844	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00485	ENSG00000258169	142436	AC010202.1	ENSG00000257254	147616	None	None
HML3_12q23.2b	HERV	HML3	oneside	chr12	102666914	102668188	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00485	ENSG00000258169	141092	AC010202.1	ENSG00000257254	153259	None	None
ERVLE_12q23.2c	HERV	ERVLE	internal	chr12	102725917	102726913	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010202.1	ENSG00000257254	212262	LINC00485	ENSG00000258169	82367	None	None
HERVL_12q23.2	HERV	HERVL	oneside	chr12	103062927	103069033	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC026108.2	ENSG00000288092	46832	AC068643.1	ENSG00000257703	10601	None	None
HERVH_12q23.2	HERV	HERVH	oneside	chr12	103223124	103228555	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C12orf42	ENSG00000179088	9036	AC068643.2	ENSG00000257860	43877	None	None
ERVLB4_12q23.3a	HERV	ERVLB4	internal	chr12	104172676	104173980	+	noncoding	LINC02385,AC089983.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000257193,ENSG00000286258	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_12q23.3a	HERV	HUERSP3B	oneside	chr12	104230670	104234293	-	noncoding	TXNRD1	protein_coding	ANTISENSE	ENSG00000198431	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_12q23.3b	HERV	HUERSP3B	internal	chr12	104234656	104238444	+	noncoding	TXNRD1	protein_coding	SENSE	ENSG00000198431	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_12q23.3	HERV	HUERSP2	prototype	chr12	104824012	104828683	+	noncoding	SLC41A2	protein_coding	ANTISENSE	ENSG00000136052	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11_12q23.3a	HERV	HERVK11	oneside	chr12	105299228	105302833	+	noncoding	C12orf75	protein_coding	SENSE	ENSG00000235162	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_12q23.3	HERV	HML3	prototype	chr12	105302834	105309240	-	noncoding	C12orf75,AC011313.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000235162,ENSG00000257642	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVK11_12q23.3b	HERV	HERVK11	oneside	chr12	105309243	105314445	+	coding	C12orf75,AC011313.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000235162,ENSG00000257642	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12q23.3a	HERV	HERVL	prototype	chr12	105602926	105610142	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079851.1	ENSG00000286520	89026	C12orf75	ENSG00000235162	206829	None	None
ERV316A3_12q23.3a	HERV	ERV316A3	oneside	chr12	105650017	105655637	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C12orf75	ENSG00000235162	253920	AC079851.1	ENSG00000286520	43531	None	None
HERVL_12q23.3b	HERV	HERVL	prototype	chr12	105678701	105685387	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	C12orf75	ENSG00000235162	282604	AC079851.1	ENSG00000286520	13781	None	None
ERV316A3_12q23.3b	HERV	ERV316A3	prototype	chr12	105907541	105912052	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CASC18	ENSG00000257859	163479	ST13P3	ENSG00000257773	103845	None	None
ERVLB4_12q23.3b	HERV	ERVLB4	oneside	chr12	105964734	105966262	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ST13P3	ENSG00000257773	49635	CASC18	ENSG00000257859	220672	None	None
MER4B_12q23.3	HERV	MER4B	prototype	chr12	106939073	106948274	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007541.1	ENSG00000260329	5755	RPL30P12	ENSG00000240631	27964	None	None
LTR57_12q23.3	HERV	LTR57	internal	chr12	106945746	106946887	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007541.1	ENSG00000260329	7142	RPL30P12	ENSG00000240631	34637	None	None
ERVLB4_12q23.3c	HERV	ERVLB4	unknown	chr12	107136812	107141805	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007649.1	ENSG00000286678	77959	AC078929.1	ENSG00000257548	13498	None	None
HERV9_12q23.3	HERV	HERV9	oneside	chr12	107214261	107218064	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC078929.1	ENSG00000257548	90947	AC007649.1	ENSG00000286678	1700	None	None
ERVLE_12q23.3a	HERV	ERVLE	internal	chr12	107717903	107718480	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PWP1	ENSG00000136045	4741	AC007622.1	ENSG00000240441	1119	None	None
MER61_12q23.3	HERV	MER61	oneside	chr12	107788616	107793326	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC126177.3	ENSG00000257398	16157	ASCL4	ENSG00000187855	11972	None	None
ERVLE_12q23.3b	HERV	ERVLE	internal	chr12	107815047	107816949	+	noncoding	AC126177.3	lncRNA	ANTISENSE	ENSG00000257398	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV30_12q23.3	HERV	HERV30	internal	chr12	107825557	107829747	-	noncoding	AC126177.3	lncRNA	SENSE	ENSG00000257398	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_12q23.3	HERV	LTR19	oneside	chr12	107848466	107851407	+	noncoding	AC126177.3	lncRNA	ANTISENSE	ENSG00000257398	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12q23.3c	HERV	ERV316A3	oneside	chr12	108413975	108419008	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01498	ENSG00000247213	15122	CMKLR1	ENSG00000174600	74658	None	None
ERV316A3_12q23.3d	HERV	ERV316A3	internal	chr12	108420145	108421558	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01498	ENSG00000247213	12572	CMKLR1	ENSG00000174600	80828	None	None
ERV316A3_12q23.3e	HERV	ERV316A3	oneside	chr12	108421653	108425860	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01498	ENSG00000247213	8270	CMKLR1	ENSG00000174600	82336	None	None
ERVLE_12q24.11	HERV	ERVLE	internal	chr12	108956438	108957846	+	noncoding	SVOP	protein_coding	ANTISENSE	ENSG00000166111	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12q24.11	HERV	ERV316A3	oneside	chr12	110181780	110183783	-	noncoding	IFT81	protein_coding	ANTISENSE	ENSG00000122970	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_12q24.11	HERV	HERVH	prototype	chr12	110404978	110411068	-	noncoding	AC144548.1	lncRNA	SENSE	ENSG00000258210	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12q24.11a	HERV	ERVLB4	oneside	chr12	111125973	111131055	-	noncoding	CUX2	protein_coding	ANTISENSE	ENSG00000111249	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12q24.11b	HERV	ERVLB4	oneside	chr12	111133649	111134589	-	noncoding	CUX2	protein_coding	ANTISENSE	ENSG00000111249	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_12q24.12a	HERV	HML6	oneside	chr12	111816175	111824274	-	noncoding	ALDH2	protein_coding	ANTISENSE	ENSG00000111275	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HML6_12q24.12b	HERV	HML6	oneside	chr12	111824341	111825854	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAPKAPK5-AS1	ENSG00000234608	13910	ALDH2	ENSG00000111275	6809	None	None
MER101_12q24.13a	HERV	MER101	internal	chr12	111946077	111949833	+	noncoding	TMEM116	protein_coding	ANTISENSE	ENSG00000198270	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_12q24.13b	HERV	MER101	oneside	chr12	111950162	111953828	+	noncoding	TMEM116	protein_coding	ANTISENSE	ENSG00000198270	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_12q24.13a	HERV	MER4	oneside	chr12	112903117	112904650	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OAS1	ENSG00000089127	2133	RPH3A	ENSG00000089169	4236	None	None
ERV316A3_12q24.13	HERV	ERV316A3	internal	chr12	112974379	112975753	+	noncoding	AC004551.1	lncRNA	ANTISENSE	ENSG00000257452	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_12q24.13b	HERV	MER4	prototype	chr12	113404130	113408713	+	noncoding	SDS	protein_coding	ANTISENSE	ENSG00000135094	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_12q24.21	HERV	HERVH	prototype	chr12	114055744	114063389	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RBM19	ENSG00000122965	89419	AC010183.1	ENSG00000257603	13744	None	None
HERVIP10F_12q24.21	HERV	HERVIP10F	prototype	chr12	114064554	114073181	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBM19	ENSG00000122965	98229	AC010183.1	ENSG00000257603	3952	chr12:114064643-114064651	None
HERV4_12q24.21	HERV	HERV4	prototype	chr12	114174401	114179646	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010183.2	ENSG00000257997	60912	LINC02459	ENSG00000257476	59324	None	None
ERV316A3_12q24.21	HERV	ERV316A3	oneside	chr12	115722285	115725099	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009387.1	ENSG00000257781	30163	RN7SL865P	ENSG00000240205	4272	None	None
ERVLE_12q24.21	HERV	ERVLE	internal	chr12	115921517	115923027	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02463	ENSG00000257683	35380	MED13L	ENSG00000123066	30845	None	None
MER4B_12q24.22	HERV	MER4B	internal	chr12	117602208	117603678	+	noncoding	KSR2	protein_coding	ANTISENSE	ENSG00000171435	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12q24.22	HERV	HERVL	prototype	chr12	117650023	117657055	+	coding	KSR2	protein_coding	ANTISENSE	ENSG00000171435	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH19_12q24.23	HERV	HERVFH19	prototype	chr12	118480197	118489482	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02460	ENSG00000255714	155833	AC026367.2	ENSG00000275409	49498	None	None
ERV316A3_12q24.23	HERV	ERV316A3	oneside	chr12	119329086	119331537	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00934	ENSG00000281196	25706	CCDC60	ENSG00000183273	3175	None	None
ERVLE_12q24.23	HERV	ERVLE	internal	chr12	119958014	119961309	-	noncoding	RPL35AP30	processed_pseudogene	ANTISENSE	ENSG00000226729	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_12q24.31	HERV	HERVL	prototype	chr12	120606997	120614359	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL11P5	ENSG00000242137	12449	AC125616.1	ENSG00000256008	14471	None	None
HUERSP1_12q24.31a	HERV	HUERSP1	prototype	chr12	122692601	122697575	-	noncoding	AC026333.3	lncRNA	ANTISENSE	ENSG00000256249	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_12q24.31b	HERV	HUERSP1	oneside	chr12	122709248	122711007	-	noncoding	AC026333.3	lncRNA	ANTISENSE	ENSG00000256249	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_12q24.31	HERV	HERVW	prototype	chr12	123548418	123557734	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3908	ENSG00000266655	11884	TMED2-DT	ENSG00000247373	18157	None	None
HERVIP10FH_12q24.31	HERV	HERVIP10FH	oneside	chr12	124937514	124938971	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL22P19	ENSG00000241129	1619	DHX37	ENSG00000150990	7854	chr12:124938656-124938789	None
MER4_12q24.31	HERV	MER4	prototype	chr12	125059494	125064885	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AACS	ENSG00000081760	549	AC122688.1	ENSG00000256093	2913	None	None
ERVLE_12q24.31	HERV	ERVLE	internal	chr12	125164706	125166314	-	noncoding	AC122688.4	TEC	ANTISENSE	ENSG00000280117	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12q24.32a	HERV	ERV316A3	internal	chr12	125686817	125689187	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM132B	ENSG00000139364	24440	AC005252.2	ENSG00000280125	119481	None	None
HML5_12q24.32	HERV	HML5	prototype	chr12	126030297	126034227	+	noncoding	LINC02826	lncRNA	SENSE	ENSG00000275212	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr12:126030800-126031142	chr12:126030632-126030658
HERVL_12q24.32a	HERV	HERVL	internal	chr12	126052829	126054992	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02826	ENSG00000275212	9344	LINC02359	ENSG00000284848	39120	None	None
HERVL_12q24.32b	HERV	HERVL	oneside	chr12	126422498	126423602	-	noncoding	AC007368.1	lncRNA	ANTISENSE	ENSG00000255595	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_12q24.32	HERV	HERVIP10F	oneside	chr12	126612915	126615578	-	noncoding	AC006065.4	lncRNA	SENSE	ENSG00000256732	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVI_12q24.32	HERV	HERVI	oneside	chr12	126615600	126618536	-	noncoding	AC006065.4,AC006065.2	lncRNA,processed_pseudogene	SENSE,SENSE	ENSG00000256732,ENSG00000255900	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:126618157-126618165
ERV316A3_12q24.32b	HERV	ERV316A3	oneside	chr12	126677307	126680940	-	noncoding	AC006065.4,AC006065.3,AC006065.6	lncRNA,lncRNA,TEC	SENSE,SENSE,ANTISENSE	ENSG00000256732,ENSG00000255944,ENSG00000279171	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_12q24.32	HERV	HERVH	oneside	chr12	127153655	127158069	+	noncoding	AC079949.3,AC079949.6	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000286016,ENSG00000287339	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12q24.32c	HERV	ERV316A3	oneside	chr12	127446249	127448062	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC048347.1	ENSG00000280024	73580	AC068787.4	ENSG00000287365	3284	None	None
HERVE_12q24.32	HERV	HERVE	prototype	chr12	127480879	127489548	+	coding	AC068787.3,AC068787.2	lncRNA,lncRNA	SENSE,SENSE	ENSG00000287112,ENSG00000286922	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV9_12q24.32	HERV	HERV9	prototype	chr12	127610367	127618173	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC025252.2	ENSG00000255945	10652	AC025252.1	ENSG00000199584	1163	None	None
ERV316A3_12q24.32d	HERV	ERV316A3	oneside	chr12	127678782	127682197	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025160.1	ENSG00000288523	44142	LINC02411	ENSG00000256022	42294	None	None
ERVLE_12q24.32	HERV	ERVLE	internal	chr12	127893138	127894182	-	noncoding	LINC02393	lncRNA	ANTISENSE	ENSG00000256597	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12q24.33	HERV	ERVLE	internal	chr12	128712519	128714677	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC15A4	ENSG00000139370	78517	TMEM132C	ENSG00000181234	4604	None	None
PRIMA41_12q24.33a	HERV	PRIMA41	oneside	chr12	129343952	129345711	+	noncoding	TMEM132D	protein_coding	ANTISENSE	ENSG00000151952	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_12q24.33b	HERV	PRIMA41	oneside	chr12	129348737	129352445	+	noncoding	TMEM132D	protein_coding	ANTISENSE	ENSG00000151952	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_12q24.33	HERV	HUERSP1	oneside	chr12	129666011	129670771	+	noncoding	TMEM132D	protein_coding	ANTISENSE	ENSG00000151952	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_12q24.33	HERV	HERVFRD	oneside	chr12	130768071	130768968	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RIMBP2	ENSG00000060709	51790	AC073912.4	ENSG00000279650	6726	None	None
MER4_12q24.33	HERV	MER4	oneside	chr12	131318688	131325484	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02370	ENSG00000230294	21986	AC092850.2	ENSG00000286462	5877	None	None
HERV9_12q24.33a	HERV	HERV9	oneside	chr12	131334871	131340111	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092850.2	ENSG00000286462	22060	LINC02370	ENSG00000230294	7359	None	None
HERV9_12q24.33b	HERV	HERV9	oneside	chr12	131341947	131344796	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02370	ENSG00000230294	2674	AC092850.2	ENSG00000286462	29136	None	None
HERVW_12q24.33a	HERV	HERVW	oneside	chr12	131873229	131875193	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ULK1	ENSG00000177169	19429	AC131009.2	ENSG00000256955	8691	None	None
HERVW_12q24.33b	HERV	HERVW	oneside	chr12	131875335	131880952	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ULK1	ENSG00000177169	13670	AC131009.2	ENSG00000256955	10797	None	None
ERVL_12q24.33	HERV	ERVL	internal	chr12	132339118	132340999	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC148477.10	ENSG00000286008	3478	AC148477.7	ENSG00000279113	6686	None	None
HERVH_12q24.33a	HERV	HERVH	oneside	chr12	132889511	132894206	+	coding	CHFR	protein_coding	ANTISENSE	ENSG00000072609	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_12q24.33b	HERV	HERVH	oneside	chr12	132894516	132898499	+	noncoding	CHFR	protein_coding	ANTISENSE	ENSG00000072609	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_12q24.33	HERV	ERV316A3	unknown	chr12	133063358	133066776	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073911.1	ENSG00000279466	6740	ZNF84	ENSG00000198040	54	None	None
HML2_12q24.33	HERV	HML2	prototype	chr12	133090536	133096478	-	noncoding	ZNF140	protein_coding	ANTISENSE	ENSG00000196387	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q11	HERV	ERVLE	internal	chr13	18205804	18207651	+	noncoding	FAM230C,AL356585.1	lncRNA,processed_pseudogene	SENSE,ANTISENSE	ENSG00000279516,ENSG00000279081	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_13q11	HERV	HERVIP10F	prototype	chr13	18422944	18431568	+	noncoding	FO681491.1	transcribed_unprocessed_pseudogene	SENSE	ENSG00000268486	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_13q12.11	HERV	MER4	internal	chr13	19110920	19113214	-	noncoding	AL137001.2	lncRNA	SENSE	ENSG00000287861	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_13q12.11a	HERV	HML3	prototype	chr13	19626322	19631230	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00350	ENSG00000225316	37719	MPHOSPH8	ENSG00000196199	2429	None	None
ERVLB4_13q12.11a	HERV	ERVLB4	internal	chr13	19909783	19915040	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355001.2	ENSG00000275964	44735	ZMYM2	ENSG00000121741	43630	None	None
LTR19_13q12.11	HERV	LTR19	internal	chr13	20285997	20286782	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GJB6	ENSG00000121742	53632	CRYL1	ENSG00000165475	116884	None	None
HUERSP3B_13q12.11	HERV	HUERSP3B	internal	chr13	20287514	20288927	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GJB6	ENSG00000121742	55149	CRYL1	ENSG00000165475	114739	None	None
ERVLB4_13q12.11b	HERV	ERVLB4	oneside	chr13	20317636	20319602	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GJB6	ENSG00000121742	85271	CRYL1	ENSG00000165475	84064	None	None
HUERSP2_13q12.11	HERV	HUERSP2	oneside	chr13	20324423	20326536	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GJB6	ENSG00000121742	92058	CRYL1	ENSG00000165475	77130	None	None
HML3_13q12.11b	HERV	HML3	prototype	chr13	20678247	20685411	-	coding	IFT88	protein_coding	ANTISENSE	ENSG00000032742	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q12.11	HERV	ERVLE	internal	chr13	21311505	21314276	+	noncoding	LINC00539	lncRNA	ANTISENSE	ENSG00000224429	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_13q12.11	HERV	HERVIP10FH	oneside	chr13	21588022	21590048	+	noncoding	MICU2	protein_coding	ANTISENSE	ENSG00000165487	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_13q12.12a	HERV	MER4	oneside	chr13	22881697	22883238	+	noncoding	LINC00621	lncRNA	ANTISENSE	ENSG00000262619	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr13:22881733-22881989	None
HARLEQUIN_13q12.12	HERV	HARLEQUIN	prototype	chr13	22883560	22889847	+	noncoding	LINC00621	lncRNA	ANTISENSE	ENSG00000262619	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr13:22884516-22884691	chr13:22884179-22884192,chr13:22884197-22884208,chr13:22888653-22888665
MER4_13q12.12b	HERV	MER4	oneside	chr13	22890041	22893203	+	noncoding	LINC00621	lncRNA	ANTISENSE	ENSG00000262619	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_13q12.12c	HERV	MER4	oneside	chr13	22894085	22902731	+	coding	LINC00621,BASP1P1	lncRNA,processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000262619,ENSG00000230535	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr13:22899960-22899966
ERVLB4_13q12.12a	HERV	ERVLB4	oneside	chr13	22927361	22931755	-	noncoding	AL157931.2	lncRNA	ANTISENSE	ENSG00000283075	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr13:22931474-22931476
HML3_13q12.12	HERV	HML3	oneside	chr13	23006722	23011038	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL157931.2	ENSG00000283075	74723	HMGA1P6	ENSG00000233440	123136	None	chr13:23009439-23009447
ERV316A3_13q12.12a	HERV	ERV316A3	oneside	chr13	23011352	23013772	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGA1P6	ENSG00000233440	120402	AL157931.2	ENSG00000283075	79353	None	None
ERV316A3_13q12.12b	HERV	ERV316A3	oneside	chr13	23185538	23188084	-	noncoding	SGCG	protein_coding	ANTISENSE	ENSG00000102683	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_13q12.12	HERV	HERVL	prototype	chr13	23313727	23318271	+	noncoding	SGCG	protein_coding	SENSE	ENSG00000102683	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_13q12.12d	HERV	MER4	internal	chr13	23483388	23484754	-	noncoding	LINC00327	lncRNA	ANTISENSE	ENSG00000232977	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_13q12.12	HERV	PABLA	internal	chr13	23682323	23686052	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TNFRSF19	ENSG00000127863	6219	MIPEP	ENSG00000027001	44137	None	None
LTR25_13q12.12	HERV	LTR25	internal	chr13	23959795	23961130	+	noncoding	AL445985.2	lncRNA	SENSE	ENSG00000287530	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q12.12	HERV	ERVLE	internal	chr13	24254725	24255552	-	noncoding	AL359736.1,SPATA13	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000273167,ENSG00000182957	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_13q12.12b	HERV	ERVLB4	oneside	chr13	24348068	24353803	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYCSP33	ENSG00000233545	46900	LINC00566	ENSG00000261498	10947	None	None
PRIMAX_13q12.12	HERV	PRIMAX	internal	chr13	24404760	24406062	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TPTE2P6	ENSG00000205822	2095	CYCSP33	ENSG00000233545	3731	None	None
MER4B_13q12.12	HERV	MER4B	internal	chr13	24640319	24644172	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATP12A	ENSG00000075673	36239	AL359538.2	ENSG00000285228	26336	None	None
HML5_13q12.13	HERV	HML5	prototype	chr13	24925662	24928256	+	noncoding	TPTE2P1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000253771	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr13:24925994-24926004
HUERSP3_13q12.13	HERV	HUERSP3	oneside	chr13	24995133	24998556	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL34P27	ENSG00000232858	6208	LSP1P1	ENSG00000269099	18848	None	None
ERVLB4_13q12.13	HERV	ERVLB4	oneside	chr13	26142890	26149161	-	noncoding	ATP8A2P3,RNF6	unprocessed_pseudogene,protein_coding	SENSE,SENSE	ENSG00000233963,ENSG00000127870	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_13q12.13a	HERV	ERV316A3	prototype	chr13	26225832	26232365	-	noncoding	AL138966.1	processed_pseudogene	SENSE	ENSG00000271559	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_13q12.13b	HERV	ERV316A3	internal	chr13	26628531	26629975	-	noncoding	WASF3,WASF3-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000132970,ENSG00000237001	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr13:26628801-26628807
ERV316A3_13q12.13c	HERV	ERV316A3	oneside	chr13	26636671	26638126	-	noncoding	WASF3,WASF3-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000132970,ENSG00000237001	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q12.13a	HERV	ERVLE	internal	chr13	26941320	26942133	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FGFR1OP2P1	ENSG00000230256	35459	AL160035.1	ENSG00000283579	23834	None	None
ERVLE_13q12.13b	HERV	ERVLE	internal	chr13	27199770	27203628	+	noncoding	LINC02340	lncRNA	ANTISENSE	ENSG00000275294	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr13:27203615-27203621
ERVLE_13q12.2a	HERV	ERVLE	internal	chr13	27679080	27681223	-	noncoding	POLR1D,AL136439.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000186184,ENSG00000273552	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q12.2b	HERV	ERVLE	internal	chr13	27688067	27689068	-	noncoding	POLR1D	protein_coding	ANTISENSE	ENSG00000186184	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_13q12.3a	HERV	MER41	oneside	chr13	28767746	28770415	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359741.1	ENSG00000277227	7809	CYP51A1P2	ENSG00000233588	43725	None	None
MER41_13q12.3b	HERV	MER41	internal	chr13	28789633	28790380	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTUS2	ENSG00000132938	29968	POM121L13P	ENSG00000236339	10696	None	None
ERVLE_13q12.3a	HERV	ERVLE	internal	chr13	28806261	28807078	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POM121L13P	ENSG00000236339	27324	MTUS2	ENSG00000132938	13270	None	None
ERVLB4_13q12.3a	HERV	ERVLB4	internal	chr13	29418046	29419000	-	noncoding	MTUS2	protein_coding	ANTISENSE	ENSG00000132938	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_13q12.3b	HERV	ERVLB4	internal	chr13	29419040	29420072	-	noncoding	MTUS2	protein_coding	ANTISENSE	ENSG00000132938	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_13q12.3c	HERV	MER41	internal	chr13	30055934	30059441	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL354674.1	ENSG00000266505	32134	LINC00365	ENSG00000224511	43737	None	None
MER101_13q12.3	HERV	MER101	oneside	chr13	30082904	30091837	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL354674.1	ENSG00000266505	59104	LINC00365	ENSG00000224511	11341	None	None
ERVLE_13q12.3b	HERV	ERVLE	oneside	chr13	30724513	30727951	+	noncoding	ALOX5AP	protein_coding	SENSE	ENSG00000132965	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_13q12.3	HERV	PRIMA41	internal	chr13	31360179	31361315	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	B3GLCT	ENSG00000187676	27903	AL161616.2	ENSG00000278305	58674	None	None
HUERSP3B_13q12.3	HERV	HUERSP3B	internal	chr13	31390213	31392260	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161616.2	ENSG00000278305	27729	B3GLCT	ENSG00000187676	57937	None	None
MER61_13q12.3	HERV	MER61	internal	chr13	31403653	31404380	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	B3GLCT	ENSG00000187676	71377	AL161616.2	ENSG00000278305	15609	None	None
ERVL_13q13.1a	HERV	ERVL	internal	chr13	31683396	31683990	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RXFP2	ENSG00000133105	55536	AL161616.1	ENSG00000277319	199697	None	None
PRIMA41_13q13.1	HERV	PRIMA41	oneside	chr13	31715164	31717353	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RXFP2	ENSG00000133105	22173	AL161616.1	ENSG00000277319	231465	None	None
ERVLB4_13q13.1	HERV	ERVLB4	oneside	chr13	31718551	31719819	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RXFP2	ENSG00000133105	19707	AL161616.1	ENSG00000277319	234852	None	None
HERVL18_13q13.1	HERV	HERVL18	prototype	chr13	32468596	32471903	+	noncoding	N4BP2L2	protein_coding	ANTISENSE	ENSG00000244754	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q13.1a	HERV	ERVLE	oneside	chr13	32608410	32609898	-	noncoding	PDS5B	protein_coding	ANTISENSE	ENSG00000083642	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_13q13.1	HERV	HUERSP1	oneside	chr13	32825641	32827787	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138820.1	ENSG00000277151	37463	LINC00423	ENSG00000226968	49644	None	None
ERVL_13q13.1b	HERV	ERVL	internal	chr13	32876118	32878753	+	noncoding	LINC00423	lncRNA	ANTISENSE	ENSG00000226968	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q13.1b	HERV	ERVLE	internal	chr13	32889766	32891866	-	noncoding	LINC00423	lncRNA	SENSE	ENSG00000226968	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_13q13.1a	HERV	ERV316A3	oneside	chr13	32957526	32959234	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KL	ENSG00000133116	57189	TOMM22P3	ENSG00000227604	3125	None	None
ERV316A3_13q13.1b	HERV	ERV316A3	oneside	chr13	33026467	33028287	-	noncoding	KL	protein_coding	ANTISENSE	ENSG00000133116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_13q13.2	HERV	ERVLB4	internal	chr13	33865617	33867070	+	noncoding	RFC3	protein_coding	SENSE	ENSG00000133119	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q13.2a	HERV	ERVLE	internal	chr13	34127637	34129736	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL160394.1	ENSG00000199196	26799	AL356321.1	ENSG00000278477	133127	None	None
ERVLE_13q13.2b	HERV	ERVLE	internal	chr13	34129862	34132251	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL160394.1	ENSG00000199196	29024	AL356321.1	ENSG00000278477	130612	None	None
ERV316A3_13q13.2	HERV	ERV316A3	oneside	chr13	34404927	34409340	-	noncoding	LINC02343	lncRNA	ANTISENSE	ENSG00000271850	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q13.2c	HERV	ERVLE	internal	chr13	34429646	34432540	-	noncoding	LINC02343	lncRNA	ANTISENSE	ENSG00000271850	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_13q13.2	HERV	HERVH	prototype	chr13	34799254	34803348	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161716.1	ENSG00000271901	102642	AL138690.2	ENSG00000273886	107197	None	None
ERV316A3_13q13.3a	HERV	ERV316A3	internal	chr13	36260993	36261493	+	noncoding	CCDC169-SOHLH2,CCDC169	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000250709,ENSG00000242715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_13q13.3b	HERV	ERV316A3	oneside	chr13	36265353	36267161	-	noncoding	CCDC169-SOHLH2,CCDC169	protein_coding,protein_coding	SENSE,SENSE	ENSG00000250709,ENSG00000242715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_13q13.3a	HERV	HERVH	prototype	chr13	36316325	36322191	+	noncoding	SPART	protein_coding	ANTISENSE	ENSG00000133104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr13:36317482-36317629	None
ERVLB4_13q13.3a	HERV	ERVLB4	internal	chr13	36755979	36757131	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TCEAL4P1	ENSG00000223543	13514	ARL2BPP3	ENSG00000215486	32201	None	None
HERVW_13q13.3	HERV	HERVW	prototype	chr13	36956650	36958981	+	noncoding	ALG5	protein_coding	ANTISENSE	ENSG00000120697	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_13q13.3c	HERV	ERV316A3	oneside	chr13	37142248	37147742	+	noncoding	AL356274.2	TEC	ANTISENSE	ENSG00000279511	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q13.3a	HERV	ERVLE	internal	chr13	37494673	37497249	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00547	ENSG00000275226	37691	LINC01048	ENSG00000230390	9904	None	None
HML6_13q13.3	HERV	HML6	oneside	chr13	37558860	37561209	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00547	ENSG00000275226	7324	POSTN	ENSG00000133110	1374	None	None
HERVH_13q13.3b	HERV	HERVH	prototype	chr13	37969007	37974554	-	noncoding	LINC02334	lncRNA	ANTISENSE	ENSG00000274317	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_13q13.3d	HERV	ERV316A3	internal	chr13	38073984	38074495	+	noncoding	LINC00571	lncRNA	ANTISENSE	ENSG00000223685	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_13q13.3b	HERV	ERVLB4	internal	chr13	38210513	38211281	-	noncoding	LINC00571	lncRNA	SENSE	ENSG00000223685	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_13q13.3e	HERV	ERV316A3	oneside	chr13	38307401	38312094	+	noncoding	LINC00571	lncRNA	ANTISENSE	ENSG00000223685	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q13.3b	HERV	ERVLE	internal	chr13	38404799	38407641	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00437	ENSG00000236354	125702	AL356863.1	ENSG00000279025	30864	None	None
ERV316A3_13q13.3f	HERV	ERV316A3	oneside	chr13	38561030	38562693	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00366	ENSG00000229437	5022	LINC00437	ENSG00000236354	15731	None	None
ERVLB4_13q13.3c	HERV	ERVLB4	oneside	chr13	38673645	38675539	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00366	ENSG00000229437	50974	FREM2	ENSG00000150893	11538	None	None
MER41_13q13.3	HERV	MER41	prototype	chr13	39080845	39086958	+	noncoding	AL354809.1	lncRNA	SENSE	ENSG00000273507	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_13q13.3g	HERV	ERV316A3	oneside	chr13	39165224	39169374	-	noncoding	AL354809.1	lncRNA	ANTISENSE	ENSG00000273507	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_13q14.11a	HERV	HERVL	prototype	chr13	40281279	40282974	-	noncoding	LINC00598	lncRNA	SENSE	ENSG00000215483	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_13q14.11b	HERV	HERVL	oneside	chr13	40872614	40874122	+	noncoding	TPTE2P5	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000168852	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_13q14.11a	HERV	HERVE	prototype	chr13	40874123	40881282	-	coding	TPTE2P5,AL590064.1	transcribed_unprocessed_pseudogene,lncRNA	SENSE,SENSE	ENSG00000168852,ENSG00000287837	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr13:40880930-40880934
ERVLB4_13q14.11a	HERV	ERVLB4	oneside	chr13	41025738	41029828	+	noncoding	ELF1	protein_coding	ANTISENSE	ENSG00000120690	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_13q14.11a	HERV	MER4B	internal	chr13	41160964	41163166	+	noncoding	AL354696.2	lncRNA	SENSE	ENSG00000278390	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_13q14.11b	HERV	ERVLB4	internal	chr13	41247210	41248682	-	noncoding	MTRF1	protein_coding	SENSE	ENSG00000120662	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_13q14.11b	HERV	MER4B	internal	chr13	41268226	41271983	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAC1P3	ENSG00000231404	15758	MTRF1	ENSG00000120662	4649	None	None
MER4_13q14.11	HERV	MER4	oneside	chr13	41271989	41274149	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAC1P3	ENSG00000231404	13592	MTRF1	ENSG00000120662	8412	None	None
MER101_13q14.11	HERV	MER101	internal	chr13	41293972	41297234	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAC1P3	ENSG00000231404	5652	NAA16	ENSG00000172766	14033	None	None
HERVE_13q14.11b	HERV	HERVE	internal	chr13	41421402	41424642	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR7E36P	ENSG00000205240	6606	TUBBP2	ENSG00000214222	36219	None	None
HERVH_13q14.11a	HERV	HERVH	prototype	chr13	42868004	42873158	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EPSTI1	ENSG00000133106	13230	LINC00428	ENSG00000229546	25117	None	None
HERVH_13q14.11b	HERV	HERVH	oneside	chr13	43059672	43061602	-	noncoding	DNAJC15	protein_coding	ANTISENSE	ENSG00000120675	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q14.11	HERV	ERVLE	internal	chr13	43914880	43916540	+	noncoding	AL512506.3,NRAD1	protein_coding,lncRNA	SENSE,SENSE	ENSG00000281883,ENSG00000233725	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_13q14.11a	HERV	ERV316A3	prototype	chr13	43941787	43943829	+	noncoding	AL512506.3,NRAD1	protein_coding,lncRNA	SENSE,SENSE	ENSG00000281883,ENSG00000233725	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_13q14.11b	HERV	ERV316A3	oneside	chr13	44324075	44326166	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138960.1	ENSG00000277831	43199	AL589745.1	ENSG00000230731	67479	None	None
HERVE_13q14.13a	HERV	HERVE	internal	chr13	45378077	45379338	-	noncoding	TPT1-AS1	lncRNA	ANTISENSE	ENSG00000170919	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVE_13q14.13b	HERV	HERVE	internal	chr13	45382637	45383907	-	noncoding	TPT1-AS1	lncRNA	ANTISENSE	ENSG00000170919	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q14.13	HERV	ERVLE	internal	chr13	45384069	45386407	-	noncoding	TPT1-AS1	lncRNA	ANTISENSE	ENSG00000170919	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_13q14.13	HERV	MER41	prototype	chr13	45641766	45644059	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ERICH6B	ENSG00000165837	26027	COX4I1P2	ENSG00000228869	27786	None	None
HERVL_13q14.13	HERV	HERVL	prototype	chr13	45753186	45759670	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SIAH3	ENSG00000215475	17572	AL139320.1	ENSG00000274357	20830	None	None
ERV316A3_13q14.13	HERV	ERV316A3	unknown	chr13	46094507	46098944	+	noncoding	CPB2-AS1,CPB2	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000235903,ENSG00000080618	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr13:46097231-46097245
HERVE_13q14.13c	HERV	HERVE	internal	chr13	46465840	46467206	+	noncoding	LINC01198	lncRNA	ANTISENSE	ENSG00000231817	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_13q14.2	HERV	HERVL40	internal	chr13	46964352	46965551	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GNG5P5	ENSG00000234590	341531	HTR2A	ENSG00000102468	67276	None	None
ERVLB4_13q14.2a	HERV	ERVLB4	internal	chr13	47177076	47181713	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GNG5P5	ENSG00000234590	125369	HTR2A	ENSG00000102468	280000	None	None
ERV316A3_13q14.2a	HERV	ERV316A3	oneside	chr13	47547599	47548603	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL700P	ENSG00000244521	88365	SUCLA2	ENSG00000136143	197133	None	None
ERVLE_13q14.2a	HERV	ERVLE	internal	chr13	47700289	47702912	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL700P	ENSG00000244521	241055	SUCLA2	ENSG00000136143	42824	None	None
HERVH_13q14.2a	HERV	HERVH	prototype	chr13	48056344	48062289	+	noncoding	MED4	protein_coding	ANTISENSE	ENSG00000136146	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_13q14.2	HERV	MER61	prototype	chr13	48066639	48072767	+	noncoding	MED4	protein_coding	ANTISENSE	ENSG00000136146	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_13q14.2b	HERV	ERVLB4	internal	chr13	48291903	48293370	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RB1-DT	ENSG00000231473	2792	ITM2B	ENSG00000136156	21546	None	None
LTR57_13q14.2a	HERV	LTR57	internal	chr13	48634812	48635708	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RB1	ENSG00000139687	35376	CYSLTR2	ENSG00000152207	18003	None	None
MER101_13q14.2	HERV	MER101	internal	chr13	48714928	48717005	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSME2P2	ENSG00000225131	54123	CYSLTR2	ENSG00000152207	3702	None	None
LTR57_13q14.2b	HERV	LTR57	internal	chr13	48718676	48719603	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSME2P2	ENSG00000225131	51525	CYSLTR2	ENSG00000152207	7450	None	None
ERVLE_13q14.2b	HERV	ERVLE	internal	chr13	48779755	48780556	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161421.1	ENSG00000275202	194411	PSME2P2	ENSG00000225131	7928	None	None
ERVLE_13q14.2c	HERV	ERVLE	internal	chr13	48784454	48785752	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161421.1	ENSG00000275202	189215	PSME2P2	ENSG00000225131	12627	None	None
HERVH_13q14.2b	HERV	HERVH	prototype	chr13	48866711	48872459	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161421.1	ENSG00000275202	102508	PSME2P2	ENSG00000225131	94884	None	None
ERVLE_13q14.2d	HERV	ERVLE	internal	chr13	48935199	48936177	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSME2P2	ENSG00000225131	163372	AL161421.1	ENSG00000275202	38790	None	None
HERVL_13q14.2	HERV	HERVL	oneside	chr13	49091428	49092606	-	noncoding	FNDC3A	protein_coding	ANTISENSE	ENSG00000102531	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_13q14.2b	HERV	ERV316A3	prototype	chr13	49594590	49597448	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RCBTB1	ENSG00000136144	9032	AL135901.1	ENSG00000176882	22866	None	None
ERV316A3_13q14.3a	HERV	ERV316A3	oneside	chr13	50665127	50667268	+	noncoding	DLEU1,DLEU7	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000176124,ENSG00000186047	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q14.3	HERV	ERVLE	internal	chr13	50707648	50708204	-	noncoding	DLEU1,DLEU7	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000176124,ENSG00000186047	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_13q14.3	HERV	MER41	prototype	chr13	51127811	51133258	+	noncoding	C13orf42	protein_coding	ANTISENSE	ENSG00000226792	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_13q14.3a	HERV	MER4	oneside	chr13	51139993	51141517	+	noncoding	C13orf42	protein_coding	ANTISENSE	ENSG00000226792	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_13q14.3b	HERV	MER4	oneside	chr13	51141807	51146013	+	noncoding	C13orf42	protein_coding	ANTISENSE	ENSG00000226792	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_13q14.3a	HERV	HERVH	prototype	chr13	51169866	51175006	+	noncoding	C13orf42	protein_coding	ANTISENSE	ENSG00000226792	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr13:51169798-51170204,chr13:51173349-51173759	chr13:51171121-51171125,chr13:51173349-51173352,chr13:51171060-51171085
HERVH_13q14.3b	HERV	HERVH	oneside	chr13	52957383	52959941	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OLFM4	ENSG00000102837	68872	PCDH8	ENSG00000136099	108742	None	None
HERVH_13q14.3c	HERV	HERVH	prototype	chr13	54127418	54133158	-	noncoding	LINC00458	lncRNA	SENSE	ENSG00000234787	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr13:54132883-54132913,chr13:54132945-54132962
HERVH_13q14.3d	HERV	HERVH	oneside	chr13	54268142	54270743	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00458	ENSG00000234787	125823	MIR1297	ENSG00000283126	41229	chr13:54270342-54270610	chr13:54268482-54268493
ERV316A3_13q14.3b	HERV	ERV316A3	oneside	chr13	54648338	54651707	-	noncoding	AL442636.1	lncRNA	ANTISENSE	ENSG00000287460	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q21.1a	HERV	ERVLE	internal	chr13	54790564	54793125	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512655.1	ENSG00000286537	23227	AL442636.1	ENSG00000287460	103017	None	None
HML3_13q21.1	HERV	HML3	oneside	chr13	54918091	54920187	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390964.1	ENSG00000277047	18417	AL512655.1	ENSG00000286537	98853	None	None
HERVFH21_13q21.1	HERV	HERVFH21	oneside	chr13	54937197	54942758	-	noncoding	AL390964.1	lncRNA	ANTISENSE	ENSG00000277047	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr13:54941338-54941425	None
HERVW_13q21.1	HERV	HERVW	prototype	chr13	55053631	55061742	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390964.1	ENSG00000277047	66911	LINC02335	ENSG00000278630	1203	None	chr13:55053875-55053882
ERVLE_13q21.1b	HERV	ERVLE	internal	chr13	55171230	55172333	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02335	ENSG00000278630	9740	MIR5007	ENSG00000264387	2121	None	None
ERVLE_13q21.1c	HERV	ERVLE	internal	chr13	55194362	55194834	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR5007	ENSG00000264387	19814	AL354821.1	ENSG00000274090	340863	None	None
ERVLE_13q21.1d	HERV	ERVLE	internal	chr13	55227875	55230860	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR5007	ENSG00000264387	53327	AL354821.1	ENSG00000274090	304837	None	None
HERVL_13q21.1a	HERV	HERVL	prototype	chr13	55445849	55452844	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR5007	ENSG00000264387	271301	AL354821.1	ENSG00000274090	82853	None	None
HERVH_13q21.1a	HERV	HERVH	prototype	chr13	55578228	55584087	-	noncoding	AL354821.1	lncRNA	SENSE	ENSG00000274090	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr13:55579008-55579009,chr13:55582862-55582891
HERVL_13q21.1b	HERV	HERVL	prototype	chr13	55586538	55592378	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNF4GP1	ENSG00000228611	406822	AL354821.1	ENSG00000274090	3014	None	None
HERVH_13q21.1b	HERV	HERVH	prototype	chr13	55654931	55660802	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNF4GP1	ENSG00000228611	338398	AL354821.1	ENSG00000274090	71407	None	None
HERVP71A_13q21.1	HERV	HERVP71A	prototype	chr13	55871314	55880218	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNF4GP1	ENSG00000228611	118982	AL354821.1	ENSG00000274090	287790	None	None
ERVLE_13q21.1e	HERV	ERVLE	internal	chr13	56010054	56011068	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138997.1	ENSG00000286709	39966	HNF4GP1	ENSG00000228611	9606	None	None
HERVH_13q21.1c	HERV	HERVH	prototype	chr13	56040251	56046275	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNF4GP1	ENSG00000228611	39803	AL138997.1	ENSG00000286709	4759	None	None
HERVH_13q21.1d	HERV	HERVH	prototype	chr13	56112411	56118259	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPATA2P1	ENSG00000228319	96114	AL138997.1	ENSG00000286709	58014	None	None
ERVLE_13q21.1f	HERV	ERVLE	internal	chr13	56133222	56136768	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPATA2P1	ENSG00000228319	77605	AL138997.1	ENSG00000286709	78825	None	None
ERVL_13q21.1a	HERV	ERVL	internal	chr13	56202549	56207311	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPATA2P1	ENSG00000228319	7062	AL138997.1	ENSG00000286709	148152	None	None
ERV316A3_13q21.1a	HERV	ERV316A3	internal	chr13	56282347	56283388	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP6	ENSG00000201665	601896	SPATA2P1	ENSG00000228319	65405	None	None
HERVL74_13q21.1	HERV	HERVL74	oneside	chr13	56693248	56695910	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPATA2P1	ENSG00000228319	476306	RN7SKP6	ENSG00000201665	189374	None	None
ERVLB4_13q21.1	HERV	ERVLB4	oneside	chr13	56921458	56923992	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP6	ENSG00000201665	35856	PRR20C	ENSG00000229665	216926	None	None
MER61_13q21.1	HERV	MER61	prototype	chr13	56969845	56975305	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP6	ENSG00000201665	84243	PRR20C	ENSG00000229665	165613	None	None
MER41_13q21.1	HERV	MER41	internal	chr13	56980550	56981622	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP6	ENSG00000201665	94948	PRR20C	ENSG00000229665	159296	None	None
ERV316A3_13q21.1b	HERV	ERV316A3	internal	chr13	57130792	57131810	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRR20C	ENSG00000229665	9108	RN7SKP6	ENSG00000201665	245190	None	None
ERV316A3_13q21.1c	HERV	ERV316A3	oneside	chr13	57505844	57510168	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PCDH17	ENSG00000118946	121576	RPL31P53	ENSG00000225352	114326	None	None
ERVL_13q21.1b	HERV	ERVL	prototype	chr13	57746646	57749686	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PCDH17	ENSG00000118946	17335	RNA5SP30	ENSG00000202422	241664	None	None
ERVLE_13q21.1g	HERV	ERVLE	internal	chr13	57876985	57879456	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PCDH17	ENSG00000118946	147674	RNA5SP30	ENSG00000202422	111894	None	None
ERV316A3_13q21.1d	HERV	ERV316A3	oneside	chr13	58067414	58070575	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP30	ENSG00000202422	75950	LINC02338	ENSG00000277448	95252	None	None
ERVLE_13q21.1h	HERV	ERVLE	internal	chr13	58344026	58344744	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00374	ENSG00000232954	110909	AL161423.1	ENSG00000276208	32769	None	None
HUERSP2_13q21.1	HERV	HUERSP2	prototype	chr13	58856204	58861398	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN2P39	ENSG00000214281	148934	DNAJA1P1	ENSG00000223717	103971	chr13:58858574-58858930	None
HUERSP3B_13q21.2a	HERV	HUERSP3B	internal	chr13	59515241	59516046	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-88P	ENSG00000239003	35109	DIAPH3	ENSG00000139734	149537	None	None
ERVLE_13q21.2a	HERV	ERVLE	internal	chr13	59579867	59580933	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DIAPH3	ENSG00000139734	84650	RNU7-88P	ENSG00000239003	99735	None	None
HERV30_13q21.2	HERV	HERV30	prototype	chr13	60266187	60268720	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TARDBPP2	ENSG00000238213	6056	LINC00434	ENSG00000227336	51241	None	None
HERVL_13q21.2	HERV	HERVL	oneside	chr13	60495912	60501139	+	coding	TDRD3	protein_coding	SENSE	ENSG00000083544	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_13q21.2b	HERV	HUERSP3B	oneside	chr13	60501140	60502662	-	noncoding	TDRD3	protein_coding	ANTISENSE	ENSG00000083544	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_13q21.2c	HERV	HUERSP3B	internal	chr13	60502735	60504633	-	noncoding	TDRD3	protein_coding	ANTISENSE	ENSG00000083544	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q21.2b	HERV	ERVLE	internal	chr13	60651083	60656502	+	noncoding	LINC00378	lncRNA	SENSE	ENSG00000225249	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q21.2c	HERV	ERVLE	internal	chr13	60734796	60736901	-	noncoding	LINC00378	lncRNA	ANTISENSE	ENSG00000225249	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q21.2d	HERV	ERVLE	internal	chr13	60746991	60748490	-	noncoding	LINC00378	lncRNA	ANTISENSE	ENSG00000225249	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_13q21.2a	HERV	HERVH	prototype	chr13	61088458	61094439	+	noncoding	LINC00378	lncRNA	SENSE	ENSG00000225249	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_13q21.2	HERV	MER41	prototype	chr13	61112586	61118592	+	noncoding	LINC00378	lncRNA	SENSE	ENSG00000225249	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_13q21.2b	HERV	HERVH	prototype	chr13	61205682	61211279	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3169	ENSG00000266663	5802	PCDH20	ENSG00000280165	198406	None	None
ERVLE_13q21.2e	HERV	ERVLE	oneside	chr13	61274540	61279443	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3169	ENSG00000266663	74660	PCDH20	ENSG00000280165	130242	None	None
LTR57_13q21.2	HERV	LTR57	prototype	chr13	61291547	61296630	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PCDH20	ENSG00000280165	113055	MIR3169	ENSG00000266663	91667	None	None
HUERSP2_13q21.2	HERV	HUERSP2	internal	chr13	61523186	61526311	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RAC1P8	ENSG00000234033	278839	LINC02339	ENSG00000279797	95240	None	None
ERVLE_13q21.2f	HERV	ERVLE	oneside	chr13	61548941	61553346	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02339	ENSG00000279797	120995	RAC1P8	ENSG00000234033	251804	None	None
MER61_13q21.2	HERV	MER61	prototype	chr13	61666420	61671508	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAC1P8	ENSG00000234033	133642	LINC02339	ENSG00000279797	238474	None	chr13:61671357-61671374
ERVLB4_13q21.2	HERV	ERVLB4	prototype	chr13	61705516	61712096	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02339	ENSG00000279797	277570	RAC1P8	ENSG00000234033	93054	None	None
ERVLE_13q21.2g	HERV	ERVLE	internal	chr13	61790950	61794499	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAC1P8	ENSG00000234033	10651	LINC02339	ENSG00000279797	363004	None	None
ERVLE_13q21.31a	HERV	ERVLE	internal	chr13	61885041	61886095	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAC1P8	ENSG00000234033	79365	AL353765.1	ENSG00000270856	40995	None	None
HERVL40_13q21.31a	HERV	HERVL40	oneside	chr13	62009453	62012832	-	noncoding	LINC00358	lncRNA	SENSE	ENSG00000229578	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_13q21.31	HERV	MER4	prototype	chr13	62130597	62139857	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00358	ENSG00000229578	101025	LINC01075	ENSG00000230142	72720	None	None
HERV30_13q21.31	HERV	HERV30	internal	chr13	62149474	62156146	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00358	ENSG00000229578	119902	LINC01075	ENSG00000230142	56431	None	None
HERV9_13q21.31	HERV	HERV9	oneside	chr13	62156145	62158242	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00358	ENSG00000229578	126573	LINC01075	ENSG00000230142	54335	None	None
ERVLB4_13q21.31a	HERV	ERVLB4	internal	chr13	62251663	62254765	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01075	ENSG00000230142	1716	LINC01074	ENSG00000227611	66540	None	None
PRIMA41_13q21.31	HERV	PRIMA41	oneside	chr13	62398317	62402321	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL356102.1	ENSG00000276586	401	SQSTM1P1	ENSG00000271465	3737	None	None
HERVL40_13q21.31b	HERV	HERVL40	prototype	chr13	62487746	62489147	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445668.1	ENSG00000286469	50204	SQSTM1P1	ENSG00000271465	80830	None	None
HUERSP2_13q21.31	HERV	HUERSP2	prototype	chr13	62625244	62627940	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00448	ENSG00000228669	44345	AL445668.1	ENSG00000286469	50339	None	None
ERVLB4_13q21.31b	HERV	ERVLB4	prototype	chr13	62643537	62648004	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445668.1	ENSG00000286469	68632	LINC00448	ENSG00000228669	24281	None	None
HUERSP1_13q21.31	HERV	HUERSP1	oneside	chr13	62788191	62792234	-	noncoding	LINC00448	lncRNA	SENSE	ENSG00000228669	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q21.31b	HERV	ERVLE	internal	chr13	62861608	62863883	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00448	ENSG00000228669	64894	AL354810.1	ENSG00000273550	170785	None	None
ERVLE_13q21.31c	HERV	ERVLE	internal	chr13	62875313	62878878	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00448	ENSG00000228669	78599	AL354810.1	ENSG00000273550	155790	None	None
ERV316A3_13q21.31a	HERV	ERV316A3	internal	chr13	62984461	62985933	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL354810.1	ENSG00000273550	48735	LINC00448	ENSG00000228669	187747	None	None
ERV316A3_13q21.31b	HERV	ERV316A3	internal	chr13	63075231	63077914	-	noncoding	AL354810.1	lncRNA	ANTISENSE	ENSG00000273550	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_13q21.31c	HERV	HERVL40	internal	chr13	63167639	63168370	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00376	ENSG00000227564	14726	AL354810.1	ENSG00000273550	69842	None	None
HERVH_13q21.31	HERV	HERVH	prototype	chr13	63213193	63219132	+	noncoding	LINC00376	lncRNA	ANTISENSE	ENSG00000227564	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_13q21.31a	HERV	MER61	internal	chr13	63352595	63353670	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359208.1	ENSG00000287996	43341	LINC00376	ENSG00000227564	24466	None	None
HERVL_13q21.31a	HERV	HERVL	prototype	chr13	63441583	63445165	+	noncoding	AL359208.1	lncRNA	SENSE	ENSG00000287996	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_13q21.31b	HERV	HERVL	prototype	chr13	63484124	63487603	+	noncoding	AL359208.1	lncRNA	SENSE	ENSG00000287996	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_13q21.31a	HERV	HERVE	internal	chr13	63839081	63840345	+	noncoding	OR7E104P	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000219926	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVE_13q21.31b	HERV	HERVE	internal	chr13	63842579	63843845	+	noncoding	OR7E104P	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000219926	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER101_13q21.31	HERV	MER101	internal	chr13	63922663	63924468	-	noncoding	LINC00355	lncRNA	SENSE	ENSG00000227674	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_13q21.31c	HERV	ERVLB4	internal	chr13	64008213	64009185	+	noncoding	LINC00355	lncRNA	ANTISENSE	ENSG00000227674	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_13q21.31b	HERV	MER61	oneside	chr13	64052271	64055026	-	noncoding	LINC00355	lncRNA	SENSE	ENSG00000227674	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q21.31d	HERV	ERVLE	internal	chr13	64224311	64228683	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00355	ENSG00000227674	148267	LGMNP1	ENSG00000214269	729414	None	None
HERVL_13q21.31c	HERV	HERVL	prototype	chr13	64362415	64369318	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00355	ENSG00000227674	286371	LGMNP1	ENSG00000214269	588779	None	None
ERVLE_13q21.31e	HERV	ERVLE	internal	chr13	64655650	64656375	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00355	ENSG00000227674	579606	LGMNP1	ENSG00000214269	301722	None	None
HERVL40_13q21.31d	HERV	HERVL40	internal	chr13	64676485	64678648	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00355	ENSG00000227674	600441	LGMNP1	ENSG00000214269	279449	None	None
HERVL40_13q21.31e	HERV	HERVL40	oneside	chr13	64687084	64689749	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00355	ENSG00000227674	611040	LGMNP1	ENSG00000214269	268348	None	None
HML1_13q21.31a	HERV	HML1	oneside	chr13	64704339	64705641	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LGMNP1	ENSG00000214269	252456	LINC00355	ENSG00000227674	628295	None	None
HERVW_13q21.31	HERV	HERVW	internal	chr13	64705642	64708293	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LGMNP1	ENSG00000214269	249804	LINC00355	ENSG00000227674	629598	None	None
HML1_13q21.31b	HERV	HML1	oneside	chr13	64708337	64709472	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LGMNP1	ENSG00000214269	248625	LINC00355	ENSG00000227674	632293	None	None
ERV316A3_13q21.31c	HERV	ERV316A3	oneside	chr13	64761281	64766277	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LGMNP1	ENSG00000214269	191820	LINC00355	ENSG00000227674	685237	None	None
ERVLB4_13q21.31d	HERV	ERVLB4	internal	chr13	64927117	64929960	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00355	ENSG00000227674	851073	LGMNP1	ENSG00000214269	28137	None	None
ERV316A3_13q21.31d	HERV	ERV316A3	oneside	chr13	65197835	65199550	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STARP1	ENSG00000214266	110305	LGMNP1	ENSG00000214269	238439	None	None
ERV316A3_13q21.32a	HERV	ERV316A3	internal	chr13	65200039	65204269	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STARP1	ENSG00000214266	105586	LGMNP1	ENSG00000214269	240643	None	None
ERV316A3_13q21.32b	HERV	ERV316A3	internal	chr13	65604537	65605053	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA3P5	ENSG00000236565	182879	STARP1	ENSG00000214266	293584	None	None
ERVLE_13q21.32a	HERV	ERVLE	internal	chr13	65633689	65635317	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STARP1	ENSG00000214266	322736	HNRNPA3P5	ENSG00000236565	152615	None	None
HERVL40_13q21.32	HERV	HERVL40	oneside	chr13	65636053	65640768	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STARP1	ENSG00000214266	325100	HNRNPA3P5	ENSG00000236565	147164	None	None
ERVL_13q21.32a	HERV	ERVL	internal	chr13	65647800	65648336	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STARP1	ENSG00000214266	336847	HNRNPA3P5	ENSG00000236565	139596	None	None
ERVL_13q21.32b	HERV	ERVL	internal	chr13	65741106	65741717	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA3P5	ENSG00000236565	46215	STARP1	ENSG00000214266	430153	None	None
ERV316A3_13q21.32c	HERV	ERV316A3	oneside	chr13	65863193	65866807	+	noncoding	LINC01052	lncRNA	SENSE	ENSG00000234767	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_13q21.32a	HERV	ERVLB4	internal	chr13	66004537	66005798	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158038.1	ENSG00000286395	30838	MIR4704	ENSG00000263561	212452	None	None
ERVLE_13q21.32b	HERV	ERVLE	internal	chr13	66007965	66011314	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158038.1	ENSG00000286395	34266	MIR4704	ENSG00000263561	206936	None	None
ERVLB4_13q21.32b	HERV	ERVLB4	oneside	chr13	66076395	66080242	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158038.1	ENSG00000286395	102696	MIR4704	ENSG00000263561	138008	None	None
HERVH_13q21.32a	HERV	HERVH	prototype	chr13	66141332	66147036	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4704	ENSG00000263561	71214	AL158038.1	ENSG00000286395	167633	None	None
HERVL_13q21.32	HERV	HERVL	prototype	chr13	66177985	66184810	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4704	ENSG00000263561	33440	AL158038.1	ENSG00000286395	204286	None	None
HERVH_13q21.32b	HERV	HERVH	prototype	chr13	66226369	66232340	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRIM60P19	ENSG00000235737	36657	MIR4704	ENSG00000263561	8045	None	None
MER61_13q21.32	HERV	MER61	prototype	chr13	66612629	66618271	+	noncoding	PCDH9	protein_coding	ANTISENSE	ENSG00000184226	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_13q21.32d	HERV	ERV316A3	internal	chr13	67284504	67287091	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP53	ENSG00000214263	16798	LINC00364	ENSG00000230040	39086	None	None
ERVLB4_13q21.32c	HERV	ERVLB4	internal	chr13	67325928	67326676	-	noncoding	LINC00364	lncRNA	ANTISENSE	ENSG00000230040	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_13q21.32	HERV	HERVP71A	prototype	chr13	67340030	67348603	-	noncoding	LINC00364	lncRNA	ANTISENSE	ENSG00000230040	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr13:67348261-67348267
HERVEA_13q21.32	HERV	HERVEA	prototype	chr13	67397253	67405914	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00364	ENSG00000230040	17259	AL512452.1	ENSG00000287876	171710	None	None
ERVLE_13q21.32c	HERV	ERVLE	internal	chr13	67493040	67494354	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00364	ENSG00000230040	113046	AL512452.1	ENSG00000287876	83270	None	None
ERVLE_13q21.32d	HERV	ERVLE	internal	chr13	67657148	67658573	+	noncoding	AL512452.1	lncRNA	ANTISENSE	ENSG00000287876	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_13q21.32c	HERV	ERVL	internal	chr13	67771909	67774570	+	coding	AL512452.1	lncRNA	ANTISENSE	ENSG00000287876	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_13q21.32e	HERV	ERV316A3	internal	chr13	67849592	67852438	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR7E111P	ENSG00000231667	49770	NPM1P22	ENSG00000227969	16765	None	None
HERVL40_13q21.33a	HERV	HERVL40	internal	chr13	68120118	68121238	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590027.1	ENSG00000286820	82987	ELL2P3	ENSG00000234765	168441	None	None
MER61_13q21.33	HERV	MER61	prototype	chr13	68256804	68261738	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590027.1	ENSG00000286820	219673	ELL2P3	ENSG00000234765	27941	None	chr13:68257635-68257655
HERVL74_13q21.33	HERV	HERVL74	internal	chr13	68428652	68430394	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS3AP52	ENSG00000230405	203796	RPL37P21	ENSG00000236433	97039	None	None
PABLB_13q21.33	HERV	PABLB	internal	chr13	68555084	68556156	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL37P21	ENSG00000236433	223471	RPS3AP52	ENSG00000230405	78034	None	None
MER4_13q21.33	HERV	MER4	internal	chr13	68667998	68669095	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL12P34	ENSG00000229824	12948	RN7SL761P	ENSG00000243671	24709	None	None
ERVLE_13q21.33a	HERV	ERVLE	oneside	chr13	68855068	68857284	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL761P	ENSG00000243671	160987	LINC00550	ENSG00000281778	4000	None	None
HERVIP10FH_13q21.33	HERV	HERVIP10FH	oneside	chr13	68888651	68893551	-	noncoding	LINC02342	lncRNA	ANTISENSE	ENSG00000280580	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVW_13q21.33	HERV	HERVW	oneside	chr13	69221626	69225336	+	noncoding	LINC00383	lncRNA	SENSE	ENSG00000235221	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr13:69221864-69221869,chr13:69221956-69221960
HERVL_13q21.33a	HERV	HERVL	oneside	chr13	69225314	69227095	+	noncoding	LINC00383	lncRNA	SENSE	ENSG00000235221	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_13q21.33	HERV	ERVL	oneside	chr13	69242098	69246653	-	noncoding	LINC00383	lncRNA	ANTISENSE	ENSG00000235221	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_13q21.33a	HERV	ERV316A3	internal	chr13	69271964	69272756	-	noncoding	LINC00383	lncRNA	ANTISENSE	ENSG00000235221	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q21.33b	HERV	ERVLE	internal	chr13	69275183	69276802	-	noncoding	LINC00383	lncRNA	ANTISENSE	ENSG00000235221	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_13q21.33b	HERV	HERVL	prototype	chr13	69499137	69505954	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KLHL1	ENSG00000150361	194640	SRSF1P1	ENSG00000224640	90402	None	None
ERVLB4_13q21.33a	HERV	ERVLB4	prototype	chr13	69556541	69558978	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SRSF1P1	ENSG00000224640	147806	KLHL1	ENSG00000150361	141616	None	None
ERV316A3_13q21.33b	HERV	ERV316A3	prototype	chr13	69616063	69618494	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KLHL1	ENSG00000150361	82100	SRSF1P1	ENSG00000224640	207328	None	None
ERVLE_13q21.33c	HERV	ERVLE	internal	chr13	69994257	69998590	+	noncoding	KLHL1	protein_coding	ANTISENSE	ENSG00000150361	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_13q21.33b	HERV	HERVL40	oneside	chr13	70274877	70277498	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATXN8OS	ENSG00000230223	125785	RNU6-54P	ENSG00000202433	181966	None	None
HERVL40_13q21.33c	HERV	HERVL40	internal	chr13	70363965	70368042	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATXN8OS	ENSG00000230223	214873	RNU6-54P	ENSG00000202433	91422	None	None
PABLA_13q21.33	HERV	PABLA	internal	chr13	70883392	70885767	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445264.1	ENSG00000276841	318955	MTCL1P1	ENSG00000226554	37897	None	None
HML5_13q21.33	HERV	HML5	prototype	chr13	71026271	71031305	-	noncoding	LINC00348	lncRNA	ANTISENSE	ENSG00000226846	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_13q21.33b	HERV	ERVLB4	oneside	chr13	71104212	71105497	-	noncoding	LINC00348	lncRNA	ANTISENSE	ENSG00000226846	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_13q21.33	HERV	HERVL18	prototype	chr13	72018779	72024309	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS10P21	ENSG00000232881	104601	AL139003.1	ENSG00000212377	429593	None	None
ERVLE_13q21.33d	HERV	ERVLE	internal	chr13	72222493	72225549	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL139003.1	ENSG00000212377	228353	RPS10P21	ENSG00000232881	308315	None	None
ERVLE_13q21.33e	HERV	ERVLE	internal	chr13	72474762	72476637	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL139003.2	ENSG00000251715	14161	AL356754.2	ENSG00000278113	90576	None	None
ERVLB4_13q22.1	HERV	ERVLB4	oneside	chr13	73351752	73354248	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL162376.1	ENSG00000279754	44783	RNY1P8	ENSG00000206697	124492	None	None
MER61_13q22.1	HERV	MER61	prototype	chr13	73440159	73445618	+	noncoding	LINC00393	lncRNA	ANTISENSE	ENSG00000224853	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q22.1a	HERV	ERVLE	internal	chr13	73485388	73485959	+	noncoding	LINC00393	lncRNA	ANTISENSE	ENSG00000224853	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q22.1b	HERV	ERVLE	internal	chr13	74265055	74269349	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00402	ENSG00000235532	5079	AL353660.1	ENSG00000286330	18721	None	None
ERVLE_13q22.1c	HERV	ERVLE	internal	chr13	74641580	74643436	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00347	ENSG00000236678	76135	RIOK3P1	ENSG00000225944	185117	None	None
LTR57_13q22.1	HERV	LTR57	prototype	chr13	74747273	74752296	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00347	ENSG00000236678	181828	RIOK3P1	ENSG00000225944	76257	None	None
MER101_13q22.1	HERV	MER101	oneside	chr13	74780839	74782173	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00347	ENSG00000236678	215394	RIOK3P1	ENSG00000225944	46380	None	None
HERVL_13q22.1	HERV	HERVL	oneside	chr13	74804240	74809282	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00347	ENSG00000236678	238795	RIOK3P1	ENSG00000225944	19271	None	None
ERV316A3_13q22.2a	HERV	ERV316A3	oneside	chr13	75122354	75124757	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-38P	ENSG00000206812	12661	SSR1P2	ENSG00000226665	11397	None	None
ERV316A3_13q22.2b	HERV	ERV316A3	internal	chr13	76589678	76590803	-	noncoding	AL136441.1	lncRNA	SENSE	ENSG00000285572	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_13q22.3a	HERV	ERV316A3	oneside	chr13	77316330	77318289	-	noncoding	MYCBP2	protein_coding	SENSE	ENSG00000005810	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_13q22.3b	HERV	ERV316A3	oneside	chr13	77336186	77339601	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MYCBP2	ENSG00000005810	9092	AL159158.1	ENSG00000285714	78220	None	None
ERVLE_13q22.3a	HERV	ERVLE	internal	chr13	77362854	77363449	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL159158.1	ENSG00000285714	54372	MYCBP2	ENSG00000005810	35760	None	None
ERVLE_13q22.3b	HERV	ERVLE	internal	chr13	77491391	77492018	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL159158.1	ENSG00000285714	68544	SCEL	ENSG00000136155	43656	None	None
HERVH_13q22.3	HERV	HERVH	prototype	chr13	77933223	77939379	-	noncoding	EDNRB,OBI1-AS1,AL139002.1	protein_coding,lncRNA,lncRNA	SENSE,ANTISENSE,SENSE	ENSG00000136160,ENSG00000234377,ENSG00000233379	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_13q22.3	HERV	PRIMA41	oneside	chr13	77949794	77952568	-	noncoding	EDNRB,OBI1-AS1,AL139002.1	protein_coding,lncRNA,lncRNA	SENSE,ANTISENSE,SENSE	ENSG00000136160,ENSG00000234377,ENSG00000233379	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_13q22.3	HERV	HARLEQUIN	oneside	chr13	77970321	77974569	-	noncoding	EDNRB,OBI1-AS1,AL139002.1	protein_coding,lncRNA,lncRNA	SENSE,ANTISENSE,SENSE	ENSG00000136160,ENSG00000234377,ENSG00000233379	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11_13q22.3	HERV	HERVK11	oneside	chr13	78056554	78058996	-	noncoding	OBI1-AS1	lncRNA	ANTISENSE	ENSG00000234377	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q22.3c	HERV	ERVLE	internal	chr13	78190426	78192995	-	noncoding	OBI1-AS1	lncRNA	ANTISENSE	ENSG00000234377	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_13q22.3	HERV	HERVP71A	prototype	chr13	78425495	78431070	-	noncoding	OBI1-AS1	lncRNA	ANTISENSE	ENSG00000234377	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_13q31.1	HERV	LTR25	internal	chr13	78664894	78669286	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL21P111	ENSG00000237109	91889	OBI1	ENSG00000152193	5739	None	None
ERV316A3_13q31.1a	HERV	ERV316A3	oneside	chr13	79207050	79208370	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BCAS2P3	ENSG00000226670	40165	RBM26	ENSG00000139746	103454	None	None
HERVH_13q31.1a	HERV	HERVH	prototype	chr13	79274082	79279821	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BCAS2P3	ENSG00000226670	107197	RBM26	ENSG00000139746	32003	None	None
HERVFRD_13q31.1	HERV	HERVFRD	oneside	chr13	79393292	79394632	+	noncoding	RBM26	protein_coding	ANTISENSE	ENSG00000139746	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_13q31.1b	HERV	ERV316A3	prototype	chr13	79824676	79830995	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01038	ENSG00000229011	18991	LINC00382	ENSG00000229175	41591	None	None
ERVLE_13q31.1a	HERV	ERVLE	internal	chr13	79837738	79839098	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00382	ENSG00000229175	33488	LINC01038	ENSG00000229011	32053	chr13:79838166-79838318	None
HERVL_13q31.1a	HERV	HERVL	prototype	chr13	79856372	79860034	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01038	ENSG00000229011	50687	LINC00382	ENSG00000229175	12552	None	None
HERVL_13q31.1b	HERV	HERVL	prototype	chr13	80061803	80065418	-	coding	AL158064.1	lncRNA	SENSE	ENSG00000284196	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_13q31.1b	HERV	HERVH	prototype	chr13	80183511	80189979	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137781.1	ENSG00000285684	49143	SPRY2	ENSG00000136158	145997	None	chr13:80185878-80185919
HML6_13q31.1	HERV	HML6	prototype	chr13	80397537	80400338	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-61P	ENSG00000202398	28003	HNRNPA1P31	ENSG00000227862	218760	None	chr13:80399460-80399461
ERVLB4_13q31.1a	HERV	ERVLB4	internal	chr13	80485262	80488518	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-61P	ENSG00000202398	115728	HNRNPA1P31	ENSG00000227862	130580	None	None
ERVLE_13q31.1b	HERV	ERVLE	internal	chr13	80643626	80645144	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PWWP2AP1	ENSG00000226683	9611	HNRNPA1P31	ENSG00000227862	23559	None	None
ERVLE_13q31.1c	HERV	ERVLE	internal	chr13	81139782	81143032	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DPPA3P3	ENSG00000270415	24487	LINC00564	ENSG00000260094	82833	None	None
ERVLB4_13q31.1b	HERV	ERVLB4	internal	chr13	81203242	81203967	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DPPA3P3	ENSG00000270415	87947	LINC00564	ENSG00000260094	21898	None	None
ERVLE_13q31.1d	HERV	ERVLE	internal	chr13	81369323	81371357	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTMAP5	ENSG00000214182	318554	AL353633.1	ENSG00000229309	66916	None	None
HUERSP3B_13q31.1	HERV	HUERSP3B	prototype	chr13	81515693	81522800	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTMAP5	ENSG00000214182	167111	AL353633.1	ENSG00000229309	213286	None	None
ERVLE_13q31.1e	HERV	ERVLE	internal	chr13	81597770	81600230	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353633.1	ENSG00000229309	295363	PTMAP5	ENSG00000214182	89681	None	None
ERVLB4_13q31.1c	HERV	ERVLB4	internal	chr13	81636082	81639297	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTMAP5	ENSG00000214182	50614	AL353633.1	ENSG00000229309	333675	None	None
HERVL40_13q31.1a	HERV	HERVL40	prototype	chr13	81779989	81783754	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445255.1	ENSG00000286385	994454	PTMAP5	ENSG00000214182	88917	None	None
HERVH_13q31.1c	HERV	HERVH	prototype	chr13	81866095	81872431	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTMAP5	ENSG00000214182	175023	AL445255.1	ENSG00000286385	905777	None	None
ERVLE_13q31.1f	HERV	ERVLE	internal	chr13	81877945	81880396	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTMAP5	ENSG00000214182	186873	AL445255.1	ENSG00000286385	897812	None	None
HERVL40_13q31.1b	HERV	HERVL40	oneside	chr13	81937664	81940708	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTMAP5	ENSG00000214182	246592	AL445255.1	ENSG00000286385	837500	None	None
MER61_13q31.1a	HERV	MER61	oneside	chr13	82037819	82041434	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445255.1	ENSG00000286385	736774	PTMAP5	ENSG00000214182	346747	None	None
ERVLB4_13q31.1d	HERV	ERVLB4	oneside	chr13	82136821	82138405	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTMAP5	ENSG00000214182	445749	AL445255.1	ENSG00000286385	639803	None	None
HUERSP3_13q31.1	HERV	HUERSP3	prototype	chr13	82322862	82331669	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTMAP5	ENSG00000214182	631790	AL445255.1	ENSG00000286385	446539	None	None
ERVLB4_13q31.1e	HERV	ERVLB4	oneside	chr13	82370290	82373131	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445255.1	ENSG00000286385	405077	PTMAP5	ENSG00000214182	679218	None	None
MER4_13q31.1a	HERV	MER4	prototype	chr13	82370632	82372359	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTMAP5	ENSG00000214182	679560	AL445255.1	ENSG00000286385	405849	None	None
HERVL_13q31.1c	HERV	HERVL	internal	chr13	82386829	82388794	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445255.1	ENSG00000286385	389414	PTMAP5	ENSG00000214182	695757	None	None
HERVW_13q31.1	HERV	HERVW	oneside	chr13	82457554	82460573	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTMAP5	ENSG00000214182	766482	AL445255.1	ENSG00000286385	317635	None	None
MER61_13q31.1b	HERV	MER61	internal	chr13	82567682	82569219	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445255.1	ENSG00000286385	208989	PTMAP5	ENSG00000214182	876610	None	None
ERV316A3_13q31.1c	HERV	ERV316A3	internal	chr13	82610745	82611856	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTMAP5	ENSG00000214182	919673	AL445255.1	ENSG00000286385	166352	None	None
ERVL_13q31.1a	HERV	ERVL	internal	chr13	82795983	82799072	+	noncoding	AL445255.1	lncRNA	ANTISENSE	ENSG00000286385	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q31.1g	HERV	ERVLE	internal	chr13	82905779	82908466	-	noncoding	AL445255.1	lncRNA	SENSE	ENSG00000286385	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_13q31.1d	HERV	ERV316A3	internal	chr13	82916478	82919887	-	noncoding	AL445255.1	lncRNA	SENSE	ENSG00000286385	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_13q31.1d	HERV	HERVL	oneside	chr13	82970272	82974475	-	noncoding	AL445255.1	lncRNA	SENSE	ENSG00000286385	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q31.1h	HERV	ERVLE	internal	chr13	82980197	82981001	+	noncoding	AL445255.1	lncRNA	ANTISENSE	ENSG00000286385	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q31.1i	HERV	ERVLE	internal	chr13	82982378	82984633	-	noncoding	AL445255.1	lncRNA	SENSE	ENSG00000286385	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_13q31.1f	HERV	ERVLB4	oneside	chr13	83015573	83019637	-	noncoding	AL445255.1	lncRNA	SENSE	ENSG00000286385	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_13q31.1g	HERV	ERVLB4	internal	chr13	83019706	83022609	-	noncoding	AL445255.1	lncRNA	SENSE	ENSG00000286385	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_13q31.1	HERV	MER4B	internal	chr13	83121432	83122274	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445255.1	ENSG00000286385	19097	AL512782.1	ENSG00000270400	23266	None	None
HERVL40_13q31.1c	HERV	HERVL40	prototype	chr13	83228351	83233141	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512782.1	ENSG00000270400	82448	RNU6-67P	ENSG00000222791	64930	None	None
MER61_13q31.1c	HERV	MER61	oneside	chr13	83277163	83280344	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512782.1	ENSG00000270400	131260	RNU6-67P	ENSG00000222791	17727	None	None
ERVLE_13q31.1j	HERV	ERVLE	internal	chr13	83382562	83383543	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-67P	ENSG00000222791	84395	AL353688.1	ENSG00000286446	266706	None	None
HUERSP2_13q31.1a	HERV	HUERSP2	prototype	chr13	83532682	83536048	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-67P	ENSG00000222791	234515	AL353688.1	ENSG00000286446	114201	None	None
ERVLE_13q31.1k	HERV	ERVLE	internal	chr13	83608050	83608786	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-67P	ENSG00000222791	309883	AL353688.1	ENSG00000286446	41463	None	None
ERVLE_13q31.1l	HERV	ERVLE	internal	chr13	83671566	83674145	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353688.1	ENSG00000286446	16777	SLITRK1	ENSG00000178235	203060	None	None
ERVLB4_13q31.1h	HERV	ERVLB4	oneside	chr13	83683653	83685682	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353688.1	ENSG00000286446	28864	SLITRK1	ENSG00000178235	191523	None	None
ERVL_13q31.1b	HERV	ERVL	internal	chr13	83685673	83688411	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353688.1	ENSG00000286446	30884	SLITRK1	ENSG00000178235	188794	None	None
ERVLE_13q31.1m	HERV	ERVLE	oneside	chr13	83709065	83710501	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353688.1	ENSG00000286446	54276	SLITRK1	ENSG00000178235	166704	None	None
MER101_13q31.1a	HERV	MER101	oneside	chr13	83814710	83818136	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL353688.1	ENSG00000286446	159921	SLITRK1	ENSG00000178235	59069	None	None
MER101_13q31.1b	HERV	MER101	oneside	chr13	83818671	83822925	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353688.1	ENSG00000286446	163882	SLITRK1	ENSG00000178235	54280	None	None
HERVH_13q31.1d	HERV	HERVH	prototype	chr13	83908301	83913838	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590681.1	ENSG00000286284	82335	VENTXP2	ENSG00000215037	520	None	None
MER61_13q31.1d	HERV	MER61	prototype	chr13	83996062	84000931	+	noncoding	AL590681.1	lncRNA	SENSE	ENSG00000286284	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr13:83996181-83996197,chr13:83996209-83996220
ERVLE_13q31.1n	HERV	ERVLE	internal	chr13	84136549	84137517	-	noncoding	AL162493.1	lncRNA	ANTISENSE	ENSG00000288016	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr13:84137414-84137564	None
HUERSP2_13q31.1b	HERV	HUERSP2	internal	chr13	84490508	84491365	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL162493.1	ENSG00000288016	41905	MTND4P1	ENSG00000228597	28738	None	None
ERVLE_13q31.1o	HERV	ERVLE	internal	chr13	84737439	84742169	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00333	ENSG00000233349	174203	AL445588.1	ENSG00000288038	125345	None	None
HUERSP1_13q31.1a	HERV	HUERSP1	oneside	chr13	84787554	84791884	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00333	ENSG00000233349	224318	AL445588.1	ENSG00000288038	75630	None	None
HUERSP1_13q31.1b	HERV	HUERSP1	oneside	chr13	84791931	84795863	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00333	ENSG00000233349	228695	AL445588.1	ENSG00000288038	71651	None	None
MER4_13q31.1b	HERV	MER4	oneside	chr13	84867217	84869528	-	noncoding	AL445588.1	lncRNA	SENSE	ENSG00000288038	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVK14C_13q31.1	HERV	HERVK14C	prototype	chr13	84869543	84877320	+	coding	AL445588.1	lncRNA	ANTISENSE	ENSG00000288038	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_13q31.1c	HERV	MER4	internal	chr13	84877321	84879615	-	noncoding	AL445588.1	lncRNA	SENSE	ENSG00000288038	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_13q31.1	HERV	LTR57	internal	chr13	84879616	84880184	-	noncoding	AL445588.1	lncRNA	SENSE	ENSG00000288038	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_13q31.1d	HERV	MER4	internal	chr13	84880185	84880993	-	noncoding	AL445588.1	lncRNA	SENSE	ENSG00000288038	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_13q31.1e	HERV	HERVL	oneside	chr13	84905049	84907775	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445588.1	ENSG00000288038	2625	AL356313.1	ENSG00000287438	138226	None	None
HERVL_13q31.1f	HERV	HERVL	oneside	chr13	85050041	85050800	-	noncoding	AL356313.1	lncRNA	SENSE	ENSG00000287438	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q31.1p	HERV	ERVLE	internal	chr13	85244472	85246464	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL160154.1	ENSG00000286906	96351	LINC00351	ENSG00000226317	117137	None	None
ERVLE_13q31.1q	HERV	ERVLE	internal	chr13	85503768	85505739	+	noncoding	LINC00351	lncRNA	SENSE	ENSG00000226317	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_13q31.1e	HERV	ERV316A3	oneside	chr13	85596256	85597805	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356413.1	ENSG00000285834	96132	LINC00351	ENSG00000226317	51686	None	None
ERVLB4_13q31.1i	HERV	ERVLB4	internal	chr13	85945244	85947583	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MOB1AP1	ENSG00000228241	21416	AL162373.1	ENSG00000278580	107712	None	None
ERV316A3_13q31.1f	HERV	ERV316A3	internal	chr13	86060136	86065069	-	noncoding	AL354994.1	lncRNA	ANTISENSE	ENSG00000232252	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_13q31.1d	HERV	HERVL40	oneside	chr13	86087782	86093087	+	noncoding	AL354994.1	lncRNA	SENSE	ENSG00000232252	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_13q31.1c	HERV	HUERSP2	prototype	chr13	86184607	86189105	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL354994.1	ENSG00000232252	13717	FO624990.1	ENSG00000283371	77737	None	None
ERVL_13q31.1c	HERV	ERVL	unknown	chr13	86348026	86349815	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445207.1	ENSG00000287880	53167	DDX6P2	ENSG00000277914	70764	None	None
HERVH_13q31.1e	HERV	HERVH	prototype	chr13	86358168	86364136	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DDX6P2	ENSG00000277914	80906	AL445207.1	ENSG00000287880	38846	None	None
ERVLE_13q31.1r	HERV	ERVLE	internal	chr13	86532304	86534002	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TXNL1P1	ENSG00000231879	191498	AL445207.1	ENSG00000287880	69570	None	None
MER34B_13q31.1a	HERV	MER34B	internal	chr13	86544886	86547486	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TXNL1P1	ENSG00000231879	178014	AL445207.1	ENSG00000287880	82152	None	None
MER34B_13q31.1b	HERV	MER34B	internal	chr13	86547504	86550744	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TXNL1P1	ENSG00000231879	174756	AL445207.1	ENSG00000287880	84770	None	None
HERVL_13q31.1g	HERV	HERVL	oneside	chr13	86580431	86584696	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445207.1	ENSG00000287880	117697	TXNL1P1	ENSG00000231879	140804	None	None
HERVL40_13q31.1e	HERV	HERVL40	internal	chr13	86642931	86645480	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TXNL1P1	ENSG00000231879	80020	AL445207.1	ENSG00000287880	180197	None	None
ERVLE_13q31.1s	HERV	ERVLE	internal	chr13	86701835	86702461	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TXNL1P1	ENSG00000231879	23039	AL445207.1	ENSG00000287880	239101	None	None
HERVFH21_13q31.1	HERV	HERVFH21	prototype	chr13	86757264	86765921	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00430	ENSG00000233528	143665	TXNL1P1	ENSG00000231879	31211	chr13:86757349-86757738,chr13:86762349-86762555	chr13:86758156-86758176,chr13:86757349-86757355
ERVLE_13q31.1t	HERV	ERVLE	internal	chr13	86881066	86884107	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TXNL1P1	ENSG00000231879	155013	LINC00430	ENSG00000233528	25479	None	None
ERVLB4_13q31.1j	HERV	ERVLB4	internal	chr13	87004964	87005602	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBBP5	ENSG00000228074	213402	LINC00430	ENSG00000233528	67856	None	None
ERVLE_13q31.1u	HERV	ERVLE	internal	chr13	87012820	87014812	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBBP5	ENSG00000228074	204192	LINC00430	ENSG00000233528	75712	None	None
ERV316A3_13q31.1g	HERV	ERV316A3	oneside	chr13	87034225	87035999	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBBP5	ENSG00000228074	183005	LINC00430	ENSG00000233528	97117	None	None
HERVH_13q31.2a	HERV	HERVH	prototype	chr13	87186449	87192108	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBBP5	ENSG00000228074	26896	LINC00430	ENSG00000233528	249341	None	None
HERVL_13q31.2a	HERV	HERVL	oneside	chr13	87206235	87207449	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBBP5	ENSG00000228074	11555	LINC00430	ENSG00000233528	269127	None	None
ERVLB4_13q31.2a	HERV	ERVLB4	oneside	chr13	87297408	87300252	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LIN28AP2	ENSG00000228473	79220	UBBP5	ENSG00000228074	78139	None	None
ERVLB4_13q31.2b	HERV	ERVLB4	prototype	chr13	87310139	87315631	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBBP5	ENSG00000228074	90870	LIN28AP2	ENSG00000228473	63841	None	None
HERV9_13q31.2	HERV	HERV9	oneside	chr13	87333621	87337416	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBBP5	ENSG00000228074	114352	LIN28AP2	ENSG00000228473	42056	None	None
PABLB_13q31.2	HERV	PABLB	internal	chr13	87350507	87354963	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LIN28AP2	ENSG00000228473	24509	UBBP5	ENSG00000228074	131238	None	None
ERVLB4_13q31.2c	HERV	ERVLB4	oneside	chr13	87596376	87598310	+	noncoding	MIR4500HG	lncRNA	ANTISENSE	ENSG00000228824	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_13q31.2d	HERV	ERVLB4	internal	chr13	87718622	87720860	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLITRK5	ENSG00000165300	22350	AL445647.2	ENSG00000277640	44892	None	None
ERV316A3_13q31.2a	HERV	ERV316A3	oneside	chr13	87721021	87723003	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLITRK5	ENSG00000165300	24749	AL445647.2	ENSG00000277640	42749	None	None
ERVLE_13q31.2a	HERV	ERVLE	internal	chr13	87872973	87874662	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445647.1	ENSG00000272046	61741	TET1P1	ENSG00000232204	15510	None	None
MER4_13q31.2	HERV	MER4	oneside	chr13	87984947	87990935	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TET1P1	ENSG00000232204	92475	LINC00373	ENSG00000231019	151932	None	None
ERVLB4_13q31.2e	HERV	ERVLB4	oneside	chr13	88156898	88162850	-	noncoding	LINC00373	lncRNA	ANTISENSE	ENSG00000231019	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_13q31.2b	HERV	HERVL	prototype	chr13	88279107	88284464	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL29P29	ENSG00000225289	42138	AL355677.1	ENSG00000285811	187687	None	None
ERVLE_13q31.2b	HERV	ERVLE	internal	chr13	88295435	88298209	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL29P29	ENSG00000225289	58466	AL355677.1	ENSG00000285811	173942	None	None
ERV316A3_13q31.2b	HERV	ERV316A3	oneside	chr13	88405869	88410184	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL29P29	ENSG00000225289	168900	AL355677.1	ENSG00000285811	61967	None	None
ERVLB4_13q31.2f	HERV	ERVLB4	prototype	chr13	88440532	88442078	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL29P29	ENSG00000225289	203563	AL355677.1	ENSG00000285811	30073	None	None
HERVH_13q31.2b	HERV	HERVH	prototype	chr13	88512819	88518743	-	noncoding	LINC00433	lncRNA	ANTISENSE	ENSG00000229443	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q31.2c	HERV	ERVLE	internal	chr13	88657779	88659123	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRPEL2P1	ENSG00000233211	319324	LINC00560	ENSG00000261666	27382	None	None
ERVLB4_13q31.2g	HERV	ERVLB4	oneside	chr13	88680373	88686512	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRPEL2P1	ENSG00000233211	291935	LINC00560	ENSG00000261666	49976	None	None
ERVLE_13q31.2d	HERV	ERVLE	internal	chr13	88748389	88752248	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRPEL2P1	ENSG00000233211	226199	LINC00560	ENSG00000261666	117992	None	None
ERV316A3_13q31.2c	HERV	ERV316A3	oneside	chr13	89069770	89071913	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRPEL2P1	ENSG00000233211	90985	AL162573.1	ENSG00000288552	69887	None	None
ERVLB4_13q31.2h	HERV	ERVLB4	internal	chr13	89083830	89084881	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRPEL2P1	ENSG00000233211	105045	AL162573.1	ENSG00000288552	56919	None	None
ERVLE_13q31.2e	HERV	ERVLE	internal	chr13	89323658	89326652	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SP3P	ENSG00000225530	34508	LINC00440	ENSG00000234660	43418	None	None
ERVLB4_13q31.2i	HERV	ERVLB4	oneside	chr13	89327142	89329616	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SP3P	ENSG00000225530	31544	LINC00440	ENSG00000234660	46902	None	None
ERVLE_13q31.3a	HERV	ERVLE	oneside	chr13	89457572	89463328	-	noncoding	LINC02336	lncRNA	ANTISENSE	ENSG00000271395	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_13q31.3a	HERV	ERV316A3	oneside	chr13	89574728	89577047	-	noncoding	LINC02336	lncRNA	ANTISENSE	ENSG00000271395	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_13q31.3a	HERV	HERVL	prototype	chr13	89594453	89598376	+	noncoding	LINC02336	lncRNA	SENSE	ENSG00000271395	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_13q31.3b	HERV	HERVL	oneside	chr13	89603726	89605701	-	noncoding	LINC02336	lncRNA	ANTISENSE	ENSG00000271395	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLB_13q31.3	HERV	PABLB	internal	chr13	89656763	89661585	+	noncoding	LINC02336	lncRNA	SENSE	ENSG00000271395	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_13q31.3b	HERV	ERV316A3	prototype	chr13	89888851	89896607	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PEX12P1	ENSG00000215418	95224	AL355821.1	ENSG00000200733	51614	None	None
ERV316A3_13q31.3c	HERV	ERV316A3	oneside	chr13	90105726	90107807	-	noncoding	LINC00559	lncRNA	SENSE	ENSG00000261446	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_13q31.3c	HERV	HERVL	oneside	chr13	90153311	90156487	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAR1P1	ENSG00000235879	14379	RNA5SP34	ENSG00000252696	17470	None	None
ERV316A3_13q31.3d	HERV	ERV316A3	internal	chr13	90206878	90208500	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT18P27	ENSG00000224419	21884	FAR1P1	ENSG00000235879	35079	None	None
HERVP71A_13q31.3	HERV	HERVP71A	prototype	chr13	90287066	90294326	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT18P27	ENSG00000224419	55384	LINC01049	ENSG00000234384	198961	chr13:90293925-90294227	chr13:90287378-90287410
PRIMA4_13q31.3	HERV	PRIMA4	oneside	chr13	90431764	90436574	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01049	ENSG00000234384	56713	KRT18P27	ENSG00000224419	200082	None	None
HERVL18_13q31.3	HERV	HERVL18	prototype	chr13	90613417	90618427	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-75P	ENSG00000251753	163339	LINC01049	ENSG00000234384	78337	None	None
ERV316A3_13q31.3e	HERV	ERV316A3	prototype	chr13	90726719	90728480	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01049	ENSG00000234384	191639	RNU6-75P	ENSG00000251753	53286	None	None
HERVH_13q31.3a	HERV	HERVH	prototype	chr13	90839564	90845144	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-75P	ENSG00000251753	57695	LINC00410	ENSG00000231674	45810	None	None
HERVH_13q31.3b	HERV	HERVH	prototype	chr13	90848573	90854278	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00410	ENSG00000231674	36676	RNU6-75P	ENSG00000251753	66704	None	None
HERVL40_13q31.3	HERV	HERVL40	oneside	chr13	91223345	91225948	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP23	ENSG00000214178	46133	LINC00379	ENSG00000229557	91938	None	None
ERV316A3_13q31.3f	HERV	ERV316A3	oneside	chr13	91366365	91367539	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GPC5	ENSG00000179399	31082	MIR17HG	ENSG00000215417	11786	None	None
ERVLE_13q31.3b	HERV	ERVLE	internal	chr13	91367584	91368046	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GPC5	ENSG00000179399	30575	MIR17HG	ENSG00000215417	13005	None	None
ERVLE_13q31.3c	HERV	ERVLE	internal	chr13	91480806	91483631	-	noncoding	GPC5	protein_coding	ANTISENSE	ENSG00000179399	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q31.3d	HERV	ERVLE	internal	chr13	91559089	91561748	+	noncoding	GPC5	protein_coding	SENSE	ENSG00000179399	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q31.3e	HERV	ERVLE	internal	chr13	91729993	91731453	-	noncoding	GPC5	protein_coding	ANTISENSE	ENSG00000179399	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q31.3f	HERV	ERVLE	internal	chr13	91734300	91734745	-	noncoding	GPC5	protein_coding	ANTISENSE	ENSG00000179399	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q31.3g	HERV	ERVLE	internal	chr13	91791882	91792848	-	noncoding	GPC5	protein_coding	ANTISENSE	ENSG00000179399	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_13q31.3a	HERV	HML1	oneside	chr13	93039395	93040549	+	noncoding	LINC00363	lncRNA	SENSE	ENSG00000232849	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_13q31.3	HERV	HERVW	internal	chr13	93040813	93043481	+	noncoding	LINC00363	lncRNA	SENSE	ENSG00000232849	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_13q31.3b	HERV	HML1	oneside	chr13	93043469	93044777	+	noncoding	LINC00363	lncRNA	SENSE	ENSG00000232849	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_13q31.3	HERV	ERVLB4	prototype	chr13	93098531	93101508	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL354811.2	ENSG00000288001	49115	LINC00363	ENSG00000232849	40605	None	None
ERV316A3_13q32.1a	HERV	ERV316A3	prototype	chr13	94569687	94573776	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DCT	ENSG00000080166	90005	TGDS	ENSG00000088451	278	None	None
ERVLE_13q32.1a	HERV	ERVLE	internal	chr13	95381535	95382836	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNY4P27	ENSG00000200211	45334	MEMO1P5	ENSG00000271492	11213	None	None
ERVLE_13q32.1b	HERV	ERVLE	internal	chr13	95702361	95706904	-	noncoding	DNAJC3	protein_coding	ANTISENSE	ENSG00000102580	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr13:95703842-95703845
ERV316A3_13q32.1b	HERV	ERV316A3	oneside	chr13	95850245	95851184	+	noncoding	UGGT2	protein_coding	ANTISENSE	ENSG00000102595	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_13q32.1	HERV	HERVL40	prototype	chr13	96019147	96021285	-	noncoding	UGGT2	protein_coding	SENSE	ENSG00000102595	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_13q32.1	HERV	HUERSP3	prototype	chr13	96966355	96971199	+	noncoding	TULP3P1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000234267	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_13q32.1c	HERV	ERV316A3	oneside	chr13	97174990	97176483	+	noncoding	LINC00456	lncRNA	ANTISENSE	ENSG00000233124	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_13q32.2	HERV	HERVL	oneside	chr13	97587408	97592979	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359502.1	ENSG00000226134	82032	PSMA6P4	ENSG00000271625	110949	None	None
HERVH_13q32.2	HERV	HERVH	prototype	chr13	97642318	97648209	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSMA6P4	ENSG00000271625	165859	AL359502.1	ENSG00000226134	26802	None	None
MER34B_13q32.2	HERV	MER34B	unknown	chr13	97713044	97716411	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359502.1	ENSG00000226134	35081	AL359502.2	ENSG00000286544	8761	None	None
ERVLE_13q32.2	HERV	ERVLE	internal	chr13	97768010	97773503	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7AP61	ENSG00000233291	128150	AL359502.2	ENSG00000286544	37671	None	None
ERVLB4_13q32.2	HERV	ERVLB4	internal	chr13	98497985	98498600	+	noncoding	STK24	protein_coding	ANTISENSE	ENSG00000102572	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_13q32.3	HERV	HERV3	oneside	chr13	98759857	98768316	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC15A1	ENSG00000088386	7185	DOCK9	ENSG00000088387	25113	None	None
ERVLE_13q32.3	HERV	ERVLE	internal	chr13	99027851	99028912	+	noncoding	DOCK9	protein_coding	ANTISENSE	ENSG00000088387	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_13q32.3	HERV	MER4B	oneside	chr13	99138272	99140104	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS6P23	ENSG00000230871	33489	DOCK9-DT	ENSG00000260992	49647	None	None
MER4_13q32.3a	HERV	MER4	prototype	chr13	99180738	99187756	-	coding	UBAC2-AS1	lncRNA	SENSE	ENSG00000228889	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_13q32.3	HERV	ERV316A3	oneside	chr13	99342075	99343200	-	noncoding	UBAC2	protein_coding	ANTISENSE	ENSG00000134882	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_13q32.3b	HERV	MER4	oneside	chr13	99475470	99479977	+	noncoding	TM9SF2	protein_coding	SENSE	ENSG00000125304	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV4_13q32.3	HERV	HERV4	prototype	chr13	99486866	99497078	-	noncoding	TM9SF2,LINC01232	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000125304,ENSG00000280734	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr13:99496300-99496305
MER61_13q32.3	HERV	MER61	prototype	chr13	100403605	100409632	-	noncoding	PCCA	protein_coding	ANTISENSE	ENSG00000175198	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH19_13q33.1	HERV	HERVFH19	oneside	chr13	101221416	101226483	+	noncoding	NALCN	protein_coding	ANTISENSE	ENSG00000102452	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_13q33.1	HERV	LTR57	internal	chr13	101667249	101667821	+	noncoding	ITGBL1	protein_coding	SENSE	ENSG00000198542	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_13q33.1	HERV	HML5	prototype	chr13	102667824	102672563	-	noncoding	TPP2	protein_coding	ANTISENSE	ENSG00000134900	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_13q33.1	HERV	HERVL40	internal	chr13	102709608	102711111	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	METTL21C	ENSG00000139780	15104	CCDC168	ENSG00000175820	18256	None	None
HUERSP2_13q33.1	HERV	HUERSP2	prototype	chr13	103249990	103252564	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL162717.1	ENSG00000285789	91096	SLC10A2	ENSG00000125255	183573	None	None
HERVL_13q33.1a	HERV	HERVL	oneside	chr13	103470762	103472308	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136524.1	ENSG00000287734	653622	ATP6V1G1P7	ENSG00000230474	25794	None	None
HERVL_13q33.1b	HERV	HERVL	oneside	chr13	104036420	104037745	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136524.1	ENSG00000287734	88185	ATP6V1G1P7	ENSG00000230474	591452	None	None
HERVH_13q33.2	HERV	HERVH	prototype	chr13	104207593	104213824	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P45	ENSG00000225823	600503	AL136524.1	ENSG00000287734	73336	None	None
ERV316A3_13q33.2	HERV	ERV316A3	oneside	chr13	104823722	104826982	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138954.1	ENSG00000286929	583834	RPL7P45	ENSG00000225823	8653	None	None
ERVLE_13q33.2a	HERV	ERVLE	internal	chr13	104862849	104864015	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138954.1	ENSG00000286929	546801	RPL7P45	ENSG00000225823	47780	None	None
ERVLE_13q33.2b	HERV	ERVLE	internal	chr13	104877767	104878849	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P45	ENSG00000225823	62698	AL138954.1	ENSG00000286929	531967	None	None
ERVLE_13q33.2c	HERV	ERVLE	internal	chr13	105131632	105132525	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138954.1	ENSG00000286929	278291	RPL7P45	ENSG00000225823	316563	None	None
ERVLB4_13q33.2	HERV	ERVLB4	internal	chr13	105393263	105394130	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138954.1	ENSG00000286929	16686	RPL7P45	ENSG00000225823	578194	None	None
ERVLB4_13q33.3	HERV	ERVLB4	prototype	chr13	106826623	106833691	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP24	ENSG00000174408	30125	AL162574.2	ENSG00000278698	52344	None	None
ERVLE_13q33.3a	HERV	ERVLE	internal	chr13	107133714	107137041	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM155A	ENSG00000204442	26469	AL354741.1	ENSG00000285643	172322	None	None
HERV9_13q33.3	HERV	HERV9	oneside	chr13	107892019	107897630	-	noncoding	AL359436.1	lncRNA	ANTISENSE	ENSG00000286343	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_13q33.3b	HERV	ERVLE	internal	chr13	107992407	107995799	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359436.1	ENSG00000286343	58904	LIG4	ENSG00000174405	211640	chr13:107995355-107995370	None
ERVLE_13q33.3c	HERV	ERVLE	internal	chr13	108119698	108121730	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LIG4	ENSG00000174405	85709	AL359436.1	ENSG00000286343	186195	None	None
HERVL_13q33.3	HERV	HERVL	prototype	chr13	109218916	109225445	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161431.1	ENSG00000275216	44189	MYO16	ENSG00000041515	10911	None	None
ERVLE_13q33.3d	HERV	ERVLE	internal	chr13	109236056	109238572	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MYO16	ENSG00000041515	28051	AL161431.1	ENSG00000275216	31062	None	None
HERVH_13q33.3	HERV	HERVH	prototype	chr13	109265090	109271116	+	noncoding	AL161431.1	lncRNA	SENSE	ENSG00000275216	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr13:109265485-109265518,chr13:109268986-109269006
ERVLE_13q33.3e	HERV	ERVLE	internal	chr13	109315443	109316147	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01067	ENSG00000236053	3670	LINC00399	ENSG00000229792	84549	None	None
ERVLE_13q33.3f	HERV	ERVLE	oneside	chr13	109323457	109325339	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01067	ENSG00000236053	11684	LINC00399	ENSG00000229792	75357	None	None
ERV316A3_13q33.3a	HERV	ERV316A3	internal	chr13	109445952	109446780	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL163541.1	ENSG00000285534	31959	LINC00399	ENSG00000229792	44311	None	None
ERV316A3_13q33.3b	HERV	ERV316A3	oneside	chr13	109465321	109466932	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00399	ENSG00000229792	63680	AL163541.1	ENSG00000285534	11807	None	None
ERV316A3_13q33.3c	HERV	ERV316A3	oneside	chr13	109467032	109467884	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00399	ENSG00000229792	65391	AL163541.1	ENSG00000285534	10855	None	None
ERVL_13q34	HERV	ERVL	internal	chr13	109813009	109815571	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL162497.1	ENSG00000275741	4757	RN7SKP10	ENSG00000201161	99525	None	None
HERVL_13q34	HERV	HERVL	oneside	chr13	109948268	109952554	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP10	ENSG00000201161	32848	AL355974.1	ENSG00000274331	32304	None	None
MER101_13q34a	HERV	MER101	internal	chr13	110607324	110608435	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAB20	ENSG00000139832	45602	AL139385.1	ENSG00000275880	4647	None	None
MER34B_13q34	HERV	MER34B	internal	chr13	110741835	110742627	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL21P107	ENSG00000225239	20047	ING1	ENSG00000153487	18496	None	None
MER101_13q34b	HERV	MER101	internal	chr13	110745513	110747464	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL21P107	ENSG00000225239	15210	ING1	ENSG00000153487	22174	None	None
HERVP71A_13q34a	HERV	HERVP71A	oneside	chr13	110933146	110936620	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL442128.2	ENSG00000277767	15319	PARP1P1	ENSG00000227105	139	None	None
HERVP71A_13q34b	HERV	HERVP71A	internal	chr13	110940237	110941185	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PARP1P1	ENSG00000227105	453	AL442128.1	ENSG00000275989	4293	None	None
MER41_13q34a	HERV	MER41	prototype	chr13	110958167	110964213	+	noncoding	AL442128.1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000275989	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_13q34	HERV	HERVIP10F	oneside	chr13	110965260	110970563	+	noncoding	AL442128.1,LINC00431	transcribed_unprocessed_pseudogene,transcribed_unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000275989,ENSG00000225760	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr13:110965683-110965727
ERVLB4_13q34a	HERV	ERVLB4	internal	chr13	111045304	111046485	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00431	ENSG00000225760	54725	LINC00368	ENSG00000225870	49353	None	None
ERVLE_13q34a	HERV	ERVLE	internal	chr13	111081367	111084911	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00368	ENSG00000225870	10927	LINC00431	ENSG00000225760	90788	None	chr13:111083765-111083767
HERV9_13q34	HERV	HERV9	prototype	chr13	111189214	111199112	-	noncoding	ARHGEF7	protein_coding	ANTISENSE	ENSG00000102606	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr13:111189160-111189468	chr13:111191907-111191913,chr13:111189444-111189468
ERVLE_13q34b	HERV	ERVLE	internal	chr13	111346680	111347808	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359649.1	ENSG00000204398	240393	TEX29	ENSG00000153495	2431	None	None
ERV316A3_13q34a	HERV	ERV316A3	oneside	chr13	111700322	111702005	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00354	ENSG00000226903	163131	AL359649.1	ENSG00000204398	27714	None	None
ERV316A3_13q34b	HERV	ERV316A3	oneside	chr13	111785583	111787266	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00354	ENSG00000226903	77870	AL359649.1	ENSG00000204398	112975	None	None
ERVLB4_13q34b	HERV	ERVLB4	oneside	chr13	112187543	112188784	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01070	ENSG00000260102	8566	SOX1-OT	ENSG00000224243	79528	None	None
HUERSP1_13q34	HERV	HUERSP1	prototype	chr13	112381526	112389309	-	noncoding	SPACA7	protein_coding	ANTISENSE	ENSG00000153498	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_13q34b	HERV	MER41	oneside	chr13	113387466	113391309	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRTP1	ENSG00000139835	23318	ADPRHL1	ENSG00000153531	8301	None	None
PABLA_13q34	HERV	PABLA	internal	chr13	113779288	113782475	-	coding	TMEM255B	protein_coding	ANTISENSE	ENSG00000184497	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH19_13q34	HERV	HERVFH19	oneside	chr13	113782549	113785249	-	noncoding	TMEM255B	protein_coding	ANTISENSE	ENSG00000184497	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr13:113784647-113784650
MER101_13q34c	HERV	MER101	internal	chr13	113959658	113961609	+	noncoding	C13orf46	protein_coding	ANTISENSE	ENSG00000283199	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q11.2a	HERV	ERV316A3	oneside	chr14	18300421	18301639	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CR383658.1	ENSG00000215398	32087	ABBA01010928.1	ENSG00000283274	2242799	None	None
ERV316A3_14q11.2b	HERV	ERV316A3	internal	chr14	18301693	18302900	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CR383658.1	ENSG00000215398	30826	ABBA01010928.1	ENSG00000283274	2244071	None	None
HERVI_14q11.2	HERV	HERVI	oneside	chr14	18347310	18349749	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-458P	ENSG00000206906	4166	CR383658.2	ENSG00000257171	45877	None	None
HERVIP10F_14q11.2a	HERV	HERVIP10F	oneside	chr14	18354067	18359902	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-458P	ENSG00000206906	10923	CR383658.2	ENSG00000257171	35724	None	chr14:18359790-18359793
MER101_14q11.2a	HERV	MER101	internal	chr14	18619564	18620450	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARHGAP42P5	ENSG00000258233	3402	CR383656.6	ENSG00000257672	5003	None	None
MER41_14q11.2a	HERV	MER41	internal	chr14	18924654	18925330	+	noncoding	AL929601.1	lncRNA	SENSE	ENSG00000257891	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_14q11.2a	HERV	MER4	prototype	chr14	18935159	18941706	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL929601.1	ENSG00000257891	1081	AL929601.2	ENSG00000258265	2493	None	None
MER4_14q11.2b	HERV	MER4	internal	chr14	19003476	19004587	+	noncoding	POTEM	protein_coding	SENSE	ENSG00000222036	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
MER4B_14q11.2a	HERV	MER4B	oneside	chr14	19191625	19196122	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589743.4	ENSG00000271632	3641	OR11H13P	ENSG00000196143	10356	None	None
MER4_14q11.2c	HERV	MER4	internal	chr14	19397186	19398300	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POTEG	ENSG00000187537	4186	LINC01297	ENSG00000274827	12599	None	None
MER4_14q11.2d	HERV	MER4	oneside	chr14	19460242	19463808	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MED15P6	ENSG00000257162	21528	POTEG	ENSG00000187537	25901	None	None
MER4_14q11.2e	HERV	MER4	oneside	chr14	19464034	19466789	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MED15P6	ENSG00000257162	18547	POTEG	ENSG00000187537	29693	None	None
MER101_14q11.2b	HERV	MER101	internal	chr14	19694595	19695473	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARHGAP42P4	ENSG00000258080	3401	AL512310.2	ENSG00000257142	5006	None	None
ERV316A3_14q11.2c	HERV	ERV316A3	internal	chr14	19731185	19731941	-	noncoding	OR4N2	protein_coding	ANTISENSE	ENSG00000176294	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q11.2a	HERV	ERVLE	internal	chr14	19926295	19928268	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4K5	ENSG00000176281	4636	OR4K1	ENSG00000155249	2649	None	None
HERVIP10F_14q11.2b	HERV	HERVIP10F	oneside	chr14	19978435	19982365	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4K15	ENSG00000169488	1776	OR4Q2	ENSG00000196383	17548	None	None
ERV316A3_14q11.2d	HERV	ERV316A3	oneside	chr14	20021103	20023816	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4K14	ENSG00000169484	1796	OR4K13	ENSG00000176253	5583	None	None
ERV316A3_14q11.2e	HERV	ERV316A3	internal	chr14	20069550	20070497	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP380	ENSG00000252999	19633	OR4L1	ENSG00000176246	8567	None	None
HERVL_14q11.2	HERV	HERVL	prototype	chr14	20567316	20573538	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNASE9	ENSG00000188655	6385	AL163195.3	ENSG00000259060	9354	None	None
HERVL18_14q11.2	HERV	HERVL18	oneside	chr14	20600302	20607318	+	noncoding	AL163195.3,RNASE11,AL163195.2	protein_coding,protein_coding,lncRNA	ANTISENSE,ANTISENSE,SENSE	ENSG00000259060,ENSG00000173464,ENSG00000258573	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_14q11.2a	HERV	HERVH	prototype	chr14	20700836	20706579	+	noncoding	RNASE4,AL163636.2	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000258818,ENSG00000258451	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
PABLB_14q11.2a	HERV	PABLB	internal	chr14	20708321	20710405	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RANBP20P	ENSG00000259144	10337	AL163636.2	ENSG00000258451	1201	None	None
HERVIP10F_14q11.2c	HERV	HERVIP10F	tandem*	chr14	20710435	20719019	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RANBP20P	ENSG00000259144	1723	AL163636.2	ENSG00000258451	3315	chr14:20714996-20715195	None
MER41_14q11.2b	HERV	MER41	internal	chr14	20753026	20753876	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EDDM3A	ENSG00000181562	4646	EDDM3B	ENSG00000181552	14528	None	None
PABLB_14q11.2b	HERV	PABLB	internal	chr14	20757300	20758434	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EDDM3A	ENSG00000181562	8920	EDDM3B	ENSG00000181552	9970	None	None
PABLB_14q11.2c	HERV	PABLB	internal	chr14	20758515	20761602	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EDDM3A	ENSG00000181562	10135	EDDM3B	ENSG00000181552	6802	None	None
PRIMA41_14q11.2	HERV	PRIMA41	internal	chr14	20762604	20763363	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EDDM3A	ENSG00000181562	14224	EDDM3B	ENSG00000181552	5041	None	None
HERVH_14q11.2b	HERV	HERVH	prototype	chr14	20814518	20816730	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133371.3	ENSG00000259130	53548	RNASE1	ENSG00000129538	11663	chr14:20816521-20816784	None
HERVIP10FH_14q11.2	HERV	HERVIP10FH	prototype	chr14	20822717	20828859	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133371.3	ENSG00000259130	41419	RNASE1	ENSG00000129538	19862	None	chr14:20828074-20828092,chr14:20828113-20828134
HERVH48_14q11.2	HERV	HERVH48	prototype	chr14	20830771	20836724	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133371.3	ENSG00000259130	33554	RNASE1	ENSG00000129538	27916	None	None
ERV316A3_14q11.2f	HERV	ERV316A3	internal	chr14	20870868	20871718	+	noncoding	AL133371.3	lncRNA	ANTISENSE	ENSG00000259130	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr14:20870872-20871169	None
PABLA_14q11.2	HERV	PABLA	prototype	chr14	21003288	21010322	+	coding	AL161668.3	lncRNA	ANTISENSE	ENSG00000258471	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMAX_14q11.2	HERV	PRIMAX	internal	chr14	21692002	21692467	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC243972.3	ENSG00000256350	6487	OR4E1	ENSG00000276240	18184	None	None
HERVL40_14q11.2a	HERV	HERVL40	oneside	chr14	21833755	21837351	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRAV12-1	ENSG00000211785	3889	TRAV11	ENSG00000256474	3685	None	None
HERVL40_14q11.2b	HERV	HERVL40	oneside	chr14	21882195	21883912	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRAV12-2	ENSG00000211789	3945	TRAV13-1	ENSG00000211788	12830	None	None
HERVL40_14q11.2c	HERV	HERVL40	oneside	chr14	21960596	21961913	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC245505.1	ENSG00000258557	906	TRAV15	ENSG00000258482	9942	None	None
ERVLE_14q11.2b	HERV	ERVLE	oneside	chr14	22097570	22098590	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRAV24	ENSG00000211805	6753	TRDV1	ENSG00000211804	951	None	None
ERVLE_14q11.2c	HERV	ERVLE	oneside	chr14	22158290	22159566	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRAV28	ENSG00000258835	2652	TRAV29DV5	ENSG00000211810	3672	None	chr14:22159468-22159474
HERVW_14q11.2	HERV	HERVW	prototype	chr14	22236551	22244186	+	noncoding	AC244502.1	lncRNA	ANTISENSE	ENSG00000251002	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q11.2g	HERV	ERV316A3	oneside	chr14	22266973	22269032	+	noncoding	AC244502.1	lncRNA	ANTISENSE	ENSG00000251002	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr14:22268878-22269324	None
ERV316A3_14q11.2h	HERV	ERV316A3	oneside	chr14	22272947	22274203	+	noncoding	AC244502.1	lncRNA	ANTISENSE	ENSG00000251002	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr14:22273043-22273044
ERVLE_14q11.2d	HERV	ERVLE	internal	chr14	22369972	22372430	-	noncoding	AC244502.1	lncRNA	SENSE	ENSG00000251002	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr14:22371725-22372125	None
MER4_14q11.2f	HERV	MER4	prototype	chr14	23199081	23208143	-	coding	RNF212B	protein_coding	ANTISENSE	ENSG00000215277	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr14:23207341-23207355
MER4_14q11.2g	HERV	MER4	oneside	chr14	23335608	23337068	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PABPN1	ENSG00000100836	9423	SLC22A17	ENSG00000092096	9238	None	None
MER4B_14q11.2b	HERV	MER4B	oneside	chr14	23337068	23345236	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PABPN1	ENSG00000100836	10883	SLC22A17	ENSG00000092096	1070	None	None
HERVFRD_14q11.2	HERV	HERVFRD	prototype	chr14	23621446	23628074	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL135999.3	ENSG00000274002	1434	DHRS2	ENSG00000100867	2041	None	None
HERV3_14q11.2	HERV	HERV3	prototype	chr14	23692552	23698968	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DHRS2	ENSG00000100867	46913	AL160237.1	ENSG00000258464	829	chr14:23695550-23695669	chr14:23692843-23692855,chr14:23693012-23693039
ERVLE_14q11.2e	HERV	ERVLE	internal	chr14	23715441	23716312	+	noncoding	AL160237.1	lncRNA	ANTISENSE	ENSG00000258464	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_14q11.2c	HERV	MER41	prototype	chr14	23790591	23795497	-	noncoding	RN7SKP205	misc_RNA	ANTISENSE	ENSG00000222931	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q11.2f	HERV	ERVLE	internal	chr14	23832436	23833330	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL160237.2	ENSG00000258887	5040	AL136419.2	ENSG00000285727	42608	None	None
MER4B_14q11.2c	HERV	MER4B	internal	chr14	23840405	23841424	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL160237.2	ENSG00000258887	13009	AL136419.2	ENSG00000285727	34514	None	None
ERVLE_14q11.2g	HERV	ERVLE	internal	chr14	23863051	23864124	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136419.2	ENSG00000285727	11814	AL160237.2	ENSG00000258887	35655	None	None
HML2_14q11.2	HERV	HML2	prototype	chr14	24009696	24015776	-	noncoding	DHRS4-AS1,AL136419.1,AL136419.3	lncRNA,lncRNA,lncRNA	SENSE,ANTISENSE,ANTISENSE	ENSG00000215256,ENSG00000285467,ENSG00000286931	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q12a	HERV	ERVLE	internal	chr14	24471775	24472610	-	noncoding	AL132800.1	lncRNA	ANTISENSE	ENSG00000258744	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q12b	HERV	ERVLE	internal	chr14	24501756	24503008	+	noncoding	AL132800.1	lncRNA	SENSE	ENSG00000258744	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q12c	HERV	ERVLE	internal	chr14	24555982	24559481	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTSG	ENSG00000100448	14037	AL132800.1	ENSG00000258744	47294	None	None
ERVLE_14q12d	HERV	ERVLE	internal	chr14	24626989	24628062	-	noncoding	AL136018.1	lncRNA	ANTISENSE	ENSG00000258657	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_14q12a	HERV	HERVL	prototype	chr14	25281051	25287433	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR7K1P	ENSG00000258275	70331	HMGN2P6	ENSG00000257179	13715	None	None
ERVLE_14q12e	HERV	ERVLE	internal	chr14	25296425	25298099	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR7K1P	ENSG00000258275	59665	HMGN2P6	ENSG00000257179	29089	None	None
HERVH_14q12a	HERV	HERVH	oneside	chr14	25425572	25429122	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL079352.1	ENSG00000257976	2071	OR7K1P	ENSG00000258275	66883	None	None
HERVH_14q12b	HERV	HERVH	oneside	chr14	25429279	25430929	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL079352.1	ENSG00000257976	264	OR7K1P	ENSG00000258275	70590	None	None
PABLA_14q12	HERV	PABLA	internal	chr14	25645516	25649887	-	noncoding	LINC02306	lncRNA	SENSE	ENSG00000257986	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q12a	HERV	ERV316A3	internal	chr14	25659578	25659914	-	noncoding	LINC02306	lncRNA	SENSE	ENSG00000257986	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q12b	HERV	ERV316A3	prototype	chr14	25796936	25799750	+	noncoding	LINC02306	lncRNA	ANTISENSE	ENSG00000257986	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q12c	HERV	ERV316A3	oneside	chr14	26093796	26095151	+	noncoding	LINC02306	lncRNA	ANTISENSE	ENSG00000257986	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q12f	HERV	ERVLE	internal	chr14	26191688	26192988	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02306	ENSG00000257986	48383	CYB5AP5	ENSG00000257503	15048	None	None
ERVLE_14q12g	HERV	ERVLE	internal	chr14	26308009	26308569	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYB5AP5	ENSG00000257503	99585	NOVA1	ENSG00000139910	134521	None	None
ERVLE_14q12h	HERV	ERVLE	internal	chr14	26315065	26316549	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYB5AP5	ENSG00000257503	106641	NOVA1	ENSG00000139910	126541	None	None
HERVL40_14q12	HERV	HERVL40	internal	chr14	26526996	26528062	+	noncoding	NOVA1	protein_coding	ANTISENSE	ENSG00000139910	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_14q12a	HERV	ERVLB4	oneside	chr14	26992464	26995968	-	noncoding	AL110292.1	lncRNA	ANTISENSE	ENSG00000258081	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q12i	HERV	ERVLE	internal	chr14	27101545	27104137	-	noncoding	AL110292.1	lncRNA	ANTISENSE	ENSG00000258081	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_14q12b	HERV	HERVL	prototype	chr14	27117713	27122925	-	noncoding	AL110292.1	lncRNA	ANTISENSE	ENSG00000258081	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_14q12	HERV	ERVL	internal	chr14	27316004	27317310	+	noncoding	AL390334.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000258932	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q12d	HERV	ERV316A3	oneside	chr14	27452834	27455091	-	noncoding	AL390334.1	transcribed_processed_pseudogene	SENSE	ENSG00000258932	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_14q12	HERV	HERVL74	oneside	chr14	27514656	27516120	-	noncoding	AL390334.1	transcribed_processed_pseudogene	SENSE	ENSG00000258932	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q12j	HERV	ERVLE	internal	chr14	27535372	27536459	-	noncoding	AL390334.1	transcribed_processed_pseudogene	SENSE	ENSG00000258932	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_14q12a	HERV	MER4	oneside	chr14	27606560	27608087	+	noncoding	AL390334.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000258932	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_14q12	HERV	MER4B	oneside	chr14	27608134	27614823	+	noncoding	AL390334.1,LINC00645	transcribed_processed_pseudogene,lncRNA	ANTISENSE,SENSE	ENSG00000258932,ENSG00000258548	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr14:27612570-27612582,chr14:27612584-27612589
ERVLB4_14q12b	HERV	ERVLB4	prototype	chr14	27952923	27959228	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BNIP3P1	ENSG00000197358	305162	AL390334.1	ENSG00000258932	107637	None	None
MER41_14q12	HERV	MER41	oneside	chr14	28185469	28187376	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390334.1	ENSG00000258932	340183	BNIP3P1	ENSG00000197358	77014	None	None
HML6_14q12a	HERV	HML6	oneside	chr14	28410708	28412587	+	noncoding	AL139023.1	lncRNA	SENSE	ENSG00000257869	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_14q12b	HERV	HML6	oneside	chr14	28416461	28420773	+	noncoding	AL139023.1	lncRNA	SENSE	ENSG00000257869	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q12e	HERV	ERV316A3	oneside	chr14	28703002	28708591	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BTF3P2	ENSG00000258282	29275	FOXG1-AS1	ENSG00000257126	18084	None	None
ERVLE_14q12k	HERV	ERVLE	internal	chr14	28838742	28839724	+	noncoding	LINC02327	lncRNA	SENSE	ENSG00000258038	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_14q12c	HERV	ERVLB4	internal	chr14	28932315	28932889	-	noncoding	LINC02327,LINC02326	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000258038,ENSG00000257523	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_14q12c	HERV	HERVL	prototype	chr14	29170825	29176730	+	noncoding	AL135878.1	lncRNA	SENSE	ENSG00000258028	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q12f	HERV	ERV316A3	oneside	chr14	29299954	29303478	-	noncoding	AL135878.1,AL133166.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000258028,ENSG00000257522	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_14q12d	HERV	ERVLB4	prototype	chr14	29315543	29321926	+	noncoding	AL135878.1,AL133166.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000258028,ENSG00000257522	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q12g	HERV	ERV316A3	internal	chr14	29421654	29422058	-	noncoding	AL158058.1,AL158058.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000258107,ENSG00000286040	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_14q12	HERV	HERV3	internal	chr14	29648627	29650532	-	noncoding	PRKD1	protein_coding	SENSE	ENSG00000184304	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr14:29649318-29649593	None
ERVLE_14q12l	HERV	ERVLE	internal	chr14	29953268	29954626	+	noncoding	PRKD1,AL133372.3,AL133372.2	protein_coding,lncRNA,lncRNA	ANTISENSE,SENSE,ANTISENSE	ENSG00000184304,ENSG00000257904,ENSG00000248975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_14q12e	HERV	ERVLB4	internal	chr14	29981007	29982187	-	noncoding	PRKD1,AL133372.2	protein_coding,lncRNA	SENSE,SENSE	ENSG00000184304,ENSG00000248975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_14q12d	HERV	HERVL	oneside	chr14	30047978	30052175	+	coding	PRKD1,AL133372.2	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000184304,ENSG00000248975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_14q12	HERV	HERVL18	oneside	chr14	30527153	30530363	-	noncoding	G2E3-AS1	lncRNA	SENSE	ENSG00000257636	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_14q12	HERV	HERVIP10FH	prototype	chr14	30965849	30972553	+	noncoding	STRN3	protein_coding	ANTISENSE	ENSG00000196792	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_14q12c	HERV	HERVH	prototype	chr14	31246362	31251138	-	noncoding	AL136418.3	lncRNA	ANTISENSE	ENSG00000257831	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_14q12b	HERV	MER4	prototype	chr14	31271566	31280827	+	noncoding	AL136418.3	lncRNA	SENSE	ENSG00000257831	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER101_14q12a	HERV	MER101	oneside	chr14	31776942	31779059	-	noncoding	NUBPL	protein_coding	ANTISENSE	ENSG00000151413	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_14q12b	HERV	MER101	internal	chr14	31779369	31782971	-	noncoding	NUBPL	protein_coding	ANTISENSE	ENSG00000151413	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_14q12f	HERV	ERVLB4	oneside	chr14	31971467	31977486	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL352984.1	ENSG00000258386	29416	AL352984.2	ENSG00000275002	6372	None	None
ERVLE_14q12m	HERV	ERVLE	internal	chr14	32015078	32015912	+	noncoding	AL352984.1	lncRNA	SENSE	ENSG00000258386	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q12h	HERV	ERV316A3	tandem*	chr14	32163942	32167734	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARHGAP5	ENSG00000100852	4214	AL161665.2	ENSG00000286527	32699	None	None
HERVFRD_14q12	HERV	HERVFRD	prototype	chr14	32240756	32250648	-	noncoding	AL136298.2	processed_pseudogene	SENSE	ENSG00000258619	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q13.1a	HERV	ERV316A3	prototype	chr14	32917581	32920199	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049781.1	ENSG00000280281	34751	NPAS3	ENSG00000151322	14734	None	None
MER41_14q13.1	HERV	MER41	prototype	chr14	33868119	33874435	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPAS3	ENSG00000151322	63943	EGLN3	ENSG00000129521	49792	chr14:33870311-33870538	None
ERV316A3_14q13.1b	HERV	ERV316A3	oneside	chr14	33880548	33887380	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPAS3	ENSG00000151322	76372	EGLN3	ENSG00000129521	36847	None	None
ERVLE_14q13.1a	HERV	ERVLE	internal	chr14	33907548	33908371	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EGLN3	ENSG00000129521	15856	NPAS3	ENSG00000151322	103372	None	None
ERVLE_14q13.1b	HERV	ERVLE	internal	chr14	34316183	34320295	-	noncoding	EGLN3	protein_coding	SENSE	ENSG00000129521	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_14q13.1	HERV	MER4B	internal	chr14	34351510	34353114	-	noncoding	EGLN3	protein_coding	SENSE	ENSG00000129521	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_14q13.1a	HERV	HERVL40	oneside	chr14	34423073	34426443	-	noncoding	EGLN3	protein_coding	SENSE	ENSG00000129521	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_14q13.1b	HERV	HERVL40	oneside	chr14	34426528	34430079	-	noncoding	EGLN3	protein_coding	SENSE	ENSG00000129521	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr14:34428609-34428610
HERVH_14q13.1	HERV	HERVH	oneside	chr14	34651542	34655200	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SNX6	ENSG00000129515	21382	AL445883.1	ENSG00000275978	4364	None	None
ERVLE_14q13.2	HERV	ERVLE	internal	chr14	35900846	35902282	-	noncoding	BRMS1L,AL133304.3	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000100916,ENSG00000258342	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_14q13.2a	HERV	LTR57	oneside	chr14	35912739	35914096	+	noncoding	BRMS1L,AL133304.3	protein_coding,lncRNA	SENSE,SENSE	ENSG00000100916,ENSG00000258342	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_14q13.2b	HERV	LTR57	oneside	chr14	35923129	35928372	-	noncoding	BRMS1L,AL133304.3	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000100916,ENSG00000258342	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_14q13.2	HERV	HERVL18	prototype	chr14	36012639	36015740	-	noncoding	AL133304.3	lncRNA	ANTISENSE	ENSG00000258342	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q13.3	HERV	ERV316A3	oneside	chr14	36375902	36379643	-	noncoding	AL132857.2	lncRNA	ANTISENSE	ENSG00000283098	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_14q13.3	HERV	ERVLB4	internal	chr14	37325724	37326860	-	noncoding	MIPOL1	protein_coding	ANTISENSE	ENSG00000151338	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_14q21.1a	HERV	ERVLB4	internal	chr14	37745097	37747223	-	noncoding	TTC6	protein_coding	ANTISENSE	ENSG00000139865	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_14q21.1	HERV	HERVW	internal	chr14	38104231	38107296	+	noncoding	AL392023.2	lncRNA	ANTISENSE	ENSG00000259048	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_14q21.1a	HERV	HERVH	prototype	chr14	38190638	38196525	+	noncoding	AL392023.2,AL392023.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000259048,ENSG00000258649	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr14:38190980-38190983
ERV316A3_14q21.1a	HERV	ERV316A3	internal	chr14	38522075	38522687	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355835.1	ENSG00000259072	150737	AL357094.1	ENSG00000271468	82568	None	None
MER4_14q21.1a	HERV	MER4	prototype	chr14	39376617	39382803	-	noncoding	MIA2	protein_coding	ANTISENSE	ENSG00000150527	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q21.1b	HERV	ERV316A3	oneside	chr14	39483890	39486026	-	noncoding	AL049828.1	lncRNA	ANTISENSE	ENSG00000258526	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4B_14q21.1a	HERV	MER4B	internal	chr14	39487218	39488257	-	noncoding	AL049828.1	lncRNA	ANTISENSE	ENSG00000258526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH19_14q21.1	HERV	HERVFH19	internal	chr14	39733123	39733889	+	noncoding	AL049828.1	lncRNA	SENSE	ENSG00000258526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q21.1c	HERV	ERV316A3	oneside	chr14	39786908	39789175	-	noncoding	AL049828.1	lncRNA	ANTISENSE	ENSG00000258526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_14q21.1a	HERV	HERVL	prototype	chr14	39893202	39899723	+	noncoding	AL049828.1	lncRNA	SENSE	ENSG00000258526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_14q21.1b	HERV	HERVL	prototype	chr14	40006859	40012031	+	noncoding	AL049828.1	lncRNA	SENSE	ENSG00000258526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q21.1a	HERV	ERVLE	internal	chr14	40392480	40394759	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049828.1	ENSG00000258526	1933	AL390800.1	ENSG00000286099	235247	None	None
ERVLB4_14q21.1b	HERV	ERVLB4	internal	chr14	40440101	40441948	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390800.1	ENSG00000286099	188058	AL049828.1	ENSG00000258526	49554	None	None
LTR25_14q21.1	HERV	LTR25	internal	chr14	40464410	40470231	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049828.1	ENSG00000258526	73863	AL390800.1	ENSG00000286099	159775	None	None
HUERSP3_14q21.1	HERV	HUERSP3	prototype	chr14	40474268	40477616	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390800.1	ENSG00000286099	152390	AL049828.1	ENSG00000258526	83721	None	None
ERVLE_14q21.1b	HERV	ERVLE	internal	chr14	40567726	40569115	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390800.1	ENSG00000286099	60891	AL049828.1	ENSG00000258526	177179	None	None
ERVLE_14q21.1c	HERV	ERVLE	oneside	chr14	40574808	40577506	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049828.1	ENSG00000258526	184261	AL390800.1	ENSG00000286099	52500	None	None
ERVLE_14q21.1d	HERV	ERVLE	internal	chr14	40656340	40657521	-	noncoding	AL390800.1	lncRNA	ANTISENSE	ENSG00000286099	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_14q21.1	HERV	HUERSP2	oneside	chr14	40723588	40725294	-	noncoding	AL390800.1	lncRNA	ANTISENSE	ENSG00000286099	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_14q21.1b	HERV	MER4B	internal	chr14	40734317	40735142	+	noncoding	AL390800.1	lncRNA	SENSE	ENSG00000286099	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q21.1e	HERV	ERVLE	internal	chr14	40765685	40766330	-	noncoding	AL390800.1	lncRNA	ANTISENSE	ENSG00000286099	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_14q21.1c	HERV	ERVLB4	oneside	chr14	40770860	40775829	-	noncoding	AL390800.1	lncRNA	ANTISENSE	ENSG00000286099	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_14q21.1	HERV	MER61	internal	chr14	40857838	40859002	+	noncoding	AL390800.1	lncRNA	SENSE	ENSG00000286099	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_14q21.1c	HERV	MER4B	oneside	chr14	40864358	40866132	+	noncoding	AL390800.1	lncRNA	SENSE	ENSG00000286099	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_14q21.1c	HERV	HERVL	internal	chr14	40866149	40866854	-	noncoding	AL390800.1	lncRNA	ANTISENSE	ENSG00000286099	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q21.1f	HERV	ERVLE	internal	chr14	40916619	40919017	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390800.1	ENSG00000286099	11106	LINC02315	ENSG00000251363	35676	None	None
HERVL_14q21.1d	HERV	HERVL	prototype	chr14	41233921	41240418	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL391516.1	ENSG00000258385	55868	LINC02315	ENSG00000251363	84612	None	None
HERVH_14q21.1b	HERV	HERVH	prototype	chr14	41515871	41521881	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356596.1	ENSG00000279972	521	AL121821.3	ENSG00000258901	33781	None	None
ERVLE_14q21.1g	HERV	ERVLE	internal	chr14	41575775	41576857	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121821.2	ENSG00000258636	6800	AL121821.3	ENSG00000258901	19720	None	None
ERVLE_14q21.1h	HERV	ERVLE	internal	chr14	41831126	41833621	-	noncoding	LRFN5	protein_coding	ANTISENSE	ENSG00000165379	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_14q21.1e	HERV	HERVL	oneside	chr14	42051764	42055307	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LRFN5	ENSG00000165379	147215	AL445074.1	ENSG00000259149	204424	None	None
ERVLB4_14q21.1d	HERV	ERVLB4	oneside	chr14	42159653	42165974	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445074.1	ENSG00000259149	93757	LRFN5	ENSG00000165379	255104	None	None
ERVLB4_14q21.1e	HERV	ERVLB4	oneside	chr14	42172160	42173634	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445074.1	ENSG00000259149	86097	LRFN5	ENSG00000165379	267611	None	None
ERV316A3_14q21.1d	HERV	ERV316A3	prototype	chr14	42193075	42194546	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LRFN5	ENSG00000165379	288526	AL445074.1	ENSG00000259149	65185	None	None
MER41_14q21.1	HERV	MER41	internal	chr14	42247365	42248062	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445074.1	ENSG00000259149	11669	LRFN5	ENSG00000165379	342816	None	None
HML3_14q21.1	HERV	HML3	prototype	chr14	42307103	42314189	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL442163.1	ENSG00000258394	48794	AL445074.1	ENSG00000259149	38517	None	None
HARLEQUIN_14q21.1	HERV	HARLEQUIN	oneside	chr14	42337803	42339387	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL442163.1	ENSG00000258394	23596	AL445074.1	ENSG00000259149	69217	None	None
ERVLE_14q21.1i	HERV	ERVLE	internal	chr14	42344620	42346477	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445074.1	ENSG00000259149	76034	AL442163.1	ENSG00000258394	16506	None	None
ERVLE_14q21.1j	HERV	ERVLE	internal	chr14	42436083	42436992	-	noncoding	AL442163.1,AL450442.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000258394,ENSG00000258850	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_14q21.1f	HERV	HERVL	oneside	chr14	42454403	42459819	+	noncoding	AL442163.1,AL450442.1	lncRNA,lncRNA	SENSE,SENSE	ENSG00000258394,ENSG00000258850	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_14q21.1	HERV	MER101	internal	chr14	42612815	42615152	-	noncoding	AL442163.1	lncRNA	ANTISENSE	ENSG00000258394	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_14q21.1b	HERV	MER4	internal	chr14	42654551	42657400	+	noncoding	AL442163.1	lncRNA	SENSE	ENSG00000258394	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_14q21.1	HERV	HERVFRD	internal	chr14	42662770	42665063	-	noncoding	AL442163.1	lncRNA	ANTISENSE	ENSG00000258394	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_14q21.1g	HERV	HERVL	oneside	chr14	42760083	42761265	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356800.1	ENSG00000258934	46113	AL442163.1	ENSG00000258394	56428	None	None
HML5_14q21.1	HERV	HML5	internal	chr14	42804271	42807122	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL442163.1	ENSG00000258394	100616	AL356800.1	ENSG00000258934	256	None	None
ERVLB4_14q21.1f	HERV	ERVLB4	internal	chr14	42992770	42994862	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL163153.1	ENSG00000259047	3287	AL445383.1	ENSG00000258406	279962	None	None
HUERSP3_14q21.2	HERV	HUERSP3	internal	chr14	43002171	43008568	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL163153.1	ENSG00000259047	12688	AL445383.1	ENSG00000258406	266256	None	None
ERV316A3_14q21.2a	HERV	ERV316A3	internal	chr14	43240495	43241425	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445383.1	ENSG00000258406	33399	AL163153.1	ENSG00000259047	251012	None	None
HERVL_14q21.2a	HERV	HERVL	oneside	chr14	43281378	43284208	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPUP1	ENSG00000259051	16055	AL445383.1	ENSG00000258406	5681	None	None
ERVLE_14q21.2a	HERV	ERVLE	internal	chr14	43334103	43336853	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P2	ENSG00000258828	204030	AL583809.1	ENSG00000286464	19300	None	None
ERVLE_14q21.2b	HERV	ERVLE	internal	chr14	43478729	43480155	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P2	ENSG00000258828	60728	AL583809.1	ENSG00000286464	163926	None	None
HERV30_14q21.2	HERV	HERV30	prototype	chr14	43534701	43539420	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL583809.1	ENSG00000286464	219898	KRT8P2	ENSG00000258828	1463	None	None
MER41_14q21.2a	HERV	MER41	prototype	chr14	43576479	43583543	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P2	ENSG00000258828	34653	AL358913.1	ENSG00000258387	8599	None	None
HERV4_14q21.2a	HERV	HERV4	internal	chr14	43611702	43615137	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARHGAP16P	ENSG00000258894	15019	LINC02307	ENSG00000258969	375402	None	None
HERV4_14q21.2b	HERV	HERV4	oneside	chr14	43615902	43617521	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARHGAP16P	ENSG00000258894	19219	LINC02307	ENSG00000258969	373018	None	None
ERVLB4_14q21.2a	HERV	ERVLB4	internal	chr14	43634654	43635574	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02307	ENSG00000258969	354965	ARHGAP16P	ENSG00000258894	37971	None	None
HERVL40_14q21.2a	HERV	HERVL40	internal	chr14	43659104	43660980	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02307	ENSG00000258969	329559	ARHGAP16P	ENSG00000258894	62421	None	None
MER34B_14q21.2	HERV	MER34B	unknown	chr14	43811306	43815085	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARHGAP16P	ENSG00000258894	214623	LINC02307	ENSG00000258969	175454	None	None
ERVLB4_14q21.2b	HERV	ERVLB4	internal	chr14	43895387	43895762	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02307	ENSG00000258969	94777	ARHGAP16P	ENSG00000258894	298704	None	None
MER61_14q21.2	HERV	MER61	prototype	chr14	44379270	44384559	-	noncoding	LINC02307	lncRNA	SENSE	ENSG00000258969	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML5_14q21.2	HERV	HML5	prototype	chr14	44415526	44419206	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161752.1	ENSG00000259126	21810	LINC02277	ENSG00000258487	25541	None	None
LTR19_14q21.2	HERV	LTR19	oneside	chr14	44428520	44430630	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161752.1	ENSG00000259126	34804	LINC02277	ENSG00000258487	14117	None	chr14:44428741-44428751
HERVL_14q21.2b	HERV	HERVL	internal	chr14	44532134	44532665	-	noncoding	AL356022.1	lncRNA	ANTISENSE	ENSG00000258747	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_14q21.2b	HERV	HERVL40	prototype	chr14	44591977	44596311	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02302	ENSG00000258998	166842	AL356022.1	ENSG00000258747	24510	None	None
ERVLE_14q21.2c	HERV	ERVLE	internal	chr14	44638310	44639017	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356022.1	ENSG00000258747	70843	LINC02302	ENSG00000258998	124136	None	None
HERVL_14q21.2c	HERV	HERVL	oneside	chr14	44664847	44671724	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356022.1	ENSG00000258747	97380	LINC02302	ENSG00000258998	91429	None	None
HERVW_14q21.2	HERV	HERVW	oneside	chr14	45019485	45023694	-	noncoding	KLHL28,TOGARAM1	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000179454,ENSG00000198718	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q21.2b	HERV	ERV316A3	internal	chr14	45285366	45286510	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-552P	ENSG00000199739	10889	DNAJC19P9	ENSG00000258608	3526	None	None
HUERSP1_14q21.2	HERV	HUERSP1	oneside	chr14	45317577	45320225	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL162632.3	ENSG00000260046	48990	DNAJC19P9	ENSG00000258608	27191	None	None
HERVH_14q21.2a	HERV	HERVH	oneside	chr14	45494962	45499732	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL162632.2	ENSG00000258746	3010	AL162632.1	ENSG00000257900	105676	None	None
HML1_14q21.2	HERV	HML1	internal	chr14	45714251	45715445	-	noncoding	LINC02303	lncRNA	SENSE	ENSG00000258616	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
LTR25_14q21.2a	HERV	LTR25	internal	chr14	45785893	45787573	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02303	ENSG00000258616	69941	LINC00871	ENSG00000258700	103514	None	None
LTR25_14q21.2b	HERV	LTR25	internal	chr14	45787639	45793102	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02303	ENSG00000258616	71687	LINC00871	ENSG00000258700	97985	None	None
ERVLE_14q21.2d	HERV	ERVLE	unknown	chr14	45970416	45973209	+	noncoding	LINC00871	lncRNA	SENSE	ENSG00000258700	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_14q21.2d	HERV	HERVL	prototype	chr14	45975351	45982027	-	coding	LINC00871	lncRNA	ANTISENSE	ENSG00000258700	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_14q21.2b	HERV	HERVH	prototype	chr14	46012433	46018103	-	noncoding	LINC00871	lncRNA	ANTISENSE	ENSG00000258700	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q21.2e	HERV	ERVLE	internal	chr14	46292776	46293488	-	noncoding	LINC00871	lncRNA	ANTISENSE	ENSG00000258700	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_14q21.2c	HERV	HERVH	prototype	chr14	46544006	46549668	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00871	ENSG00000258700	42103	RPL10L	ENSG00000165496	101342	None	None
MER41_14q21.2b	HERV	MER41	internal	chr14	46584045	46584908	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL10L	ENSG00000165496	66102	LINC00871	ENSG00000258700	82142	None	None
ERVLE_14q21.2f	HERV	ERVLE	internal	chr14	46603875	46605344	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL10L	ENSG00000165496	45666	LINC00871	ENSG00000258700	101972	None	None
HERVH_14q21.3a	HERV	HERVH	prototype	chr14	47104197	47108765	+	noncoding	MDGA2	protein_coding	ANTISENSE	ENSG00000139915	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr14:47104779-47104796
ERV316A3_14q21.3a	HERV	ERV316A3	oneside	chr14	47147289	47148559	-	noncoding	MDGA2	protein_coding	SENSE	ENSG00000139915	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_14q21.3a	HERV	ERVLB4	internal	chr14	47290969	47293347	-	noncoding	MDGA2	protein_coding	SENSE	ENSG00000139915	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q21.3a	HERV	ERVLE	internal	chr14	47655122	47656738	+	noncoding	MDGA2	protein_coding	ANTISENSE	ENSG00000139915	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q21.3b	HERV	ERV316A3	oneside	chr14	47657306	47659053	+	noncoding	MDGA2	protein_coding	ANTISENSE	ENSG00000139915	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q21.3b	HERV	ERVLE	internal	chr14	47708380	47711509	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MDGA2	ENSG00000139915	32775	MIR548Y	ENSG00000263945	49486	None	None
ERV316A3_14q21.3c	HERV	ERV316A3	oneside	chr14	47766449	47768467	+	noncoding	LINC00648	lncRNA	ANTISENSE	ENSG00000259129	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q21.3c	HERV	ERVLE	internal	chr14	47921804	47922399	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359212.1	ENSG00000258639	123082	AL121576.1	ENSG00000259117	119603	None	None
MER41_14q21.3	HERV	MER41	internal	chr14	47943338	47944443	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121576.1	ENSG00000259117	141137	AL359212.1	ENSG00000258639	101038	None	None
ERVLE_14q21.3d	HERV	ERVLE	internal	chr14	48015744	48016392	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359212.1	ENSG00000258639	29089	AL121576.1	ENSG00000259117	213543	None	None
ERVLB4_14q21.3b	HERV	ERVLB4	internal	chr14	48028205	48029349	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121576.1	ENSG00000259117	226004	AL359212.1	ENSG00000258639	16132	None	None
ERVLB4_14q21.3c	HERV	ERVLB4	oneside	chr14	48078945	48080374	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359212.1	ENSG00000258639	32729	AL512358.1	ENSG00000286595	113800	None	None
HERV9_14q21.3	HERV	HERV9	oneside	chr14	48199301	48203397	+	noncoding	AL512358.1	lncRNA	SENSE	ENSG00000286595	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_14q21.3b	HERV	HERVH	prototype	chr14	48255199	48260940	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512358.2	ENSG00000287492	1081	AL512358.1	ENSG00000286595	26983	None	chr14:48260521-48260523,chr14:48260640-48260644
HERVH_14q21.3c	HERV	HERVH	prototype	chr14	48262396	48268282	-	noncoding	AL512358.2	lncRNA	SENSE	ENSG00000287492	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_14q21.3	HERV	HERVL	internal	chr14	48306809	48309001	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358335.3	ENSG00000270359	10067	AL512358.2	ENSG00000287492	41200	None	None
ERV316A3_14q21.3d	HERV	ERV316A3	internal	chr14	48503150	48505202	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358335.2	ENSG00000258751	11383	AL512360.1	ENSG00000258381	314158	None	None
HERVIP10FH_14q21.3	HERV	HERVIP10FH	oneside	chr14	48558519	48563969	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358335.2	ENSG00000258751	66752	AL512360.1	ENSG00000258381	255391	None	None
ERV316A3_14q21.3e	HERV	ERV316A3	oneside	chr14	49090825	49092051	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL110505.1	ENSG00000258868	13320	AL512361.1	ENSG00000258401	281915	None	None
ERVLE_14q21.3e	HERV	ERVLE	oneside	chr14	50272402	50278076	+	noncoding	L2HGDH	protein_coding	ANTISENSE	ENSG00000087299	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_14q21.3d	HERV	ERVLB4	internal	chr14	50377534	50381467	+	noncoding	CDKL1	protein_coding	ANTISENSE	ENSG00000100490	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q22.1	HERV	ERVLE	internal	chr14	50539759	50544229	+	noncoding	MAP4K5,ATL1	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000012983,ENSG00000198513	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
LTR57_14q22.1	HERV	LTR57	oneside	chr14	50544972	50550643	+	noncoding	MAP4K5,ATL1	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000012983,ENSG00000198513	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_14q22.1a	HERV	HERVH	prototype	chr14	50893162	50896882	+	noncoding	PYGL,ABHD12B	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000100504,ENSG00000131969	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr14:50894274-50894279
ERV316A3_14q22.1	HERV	ERV316A3	oneside	chr14	51194956	51196939	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRIM9	ENSG00000100505	98895	TMX1	ENSG00000139921	43223	None	None
HERVL_14q22.1	HERV	HERVL	oneside	chr14	51373849	51377284	+	noncoding	AL358332.1	lncRNA	ANTISENSE	ENSG00000258942	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_14q22.1	HERV	HERVE	internal	chr14	51748587	51752556	+	noncoding	AL079307.2	lncRNA	SENSE	ENSG00000259111	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_14q22.1	HERV	HML3	prototype	chr14	52164599	52172577	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL118557.1	ENSG00000258440	8420	PTGDR	ENSG00000168229	95121	None	None
PRIMA4_14q22.1	HERV	PRIMA4	prototype	chr14	52280360	52286612	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTGDR	ENSG00000168229	3636	AL365475.1	ENSG00000261208	185	chr14:52281104-52281370	None
HERVH_14q22.1b	HERV	HERVH	prototype	chr14	53128745	53135552	+	noncoding	DDHD1	protein_coding	ANTISENSE	ENSG00000100523	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_14q22.1	HERV	HERVIP10FH	prototype	chr14	53175755	53182025	-	noncoding	AL365295.1	lncRNA	ANTISENSE	ENSG00000237356	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_14q22.1a	HERV	MER4	oneside	chr14	53254370	53258280	-	noncoding	AL365295.1	lncRNA	ANTISENSE	ENSG00000237356	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_14q22.1b	HERV	MER4	oneside	chr14	53258522	53262061	-	noncoding	AL365295.1	lncRNA	ANTISENSE	ENSG00000237356	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_14q22.1	HERV	HERVL18	prototype	chr14	53273554	53279365	-	noncoding	AL365295.1	lncRNA	ANTISENSE	ENSG00000237356	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_14q22.1	HERV	HERVW	oneside	chr14	53361643	53363005	+	noncoding	AL365295.1	lncRNA	SENSE	ENSG00000237356	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_14q22.1	HERV	ERVL	internal	chr14	53557124	53562143	+	noncoding	AL365295.1	lncRNA	SENSE	ENSG00000237356	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q22.2a	HERV	ERVLE	internal	chr14	53708555	53709232	-	noncoding	AL365295.1,LINC02331	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000237356,ENSG00000235269	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q22.2b	HERV	ERVLE	internal	chr14	54025760	54027196	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDKN3	ENSG00000100526	369653	ATP5F1CP1	ENSG00000224004	33765	None	None
ERV316A3_14q22.2	HERV	ERV316A3	oneside	chr14	54078312	54081111	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDKN3	ENSG00000100526	315738	ATP5F1CP1	ENSG00000224004	86317	None	None
ERVLE_14q22.3a	HERV	ERVLE	internal	chr14	55465406	55466395	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TBPL2	ENSG00000182521	8680	KTN1-AS1	ENSG00000186615	30391	None	None
HERVEA_14q22.3	HERV	HERVEA	oneside	chr14	55819549	55821618	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL163952.1	ENSG00000259868	74825	LINC00520	ENSG00000258791	22818	None	None
ERV316A3_14q22.3a	HERV	ERV316A3	prototype	chr14	56416997	56418621	+	noncoding	LINC02284	lncRNA	SENSE	ENSG00000259719	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_14q22.3a	HERV	MER4	oneside	chr14	56431040	56437062	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02284	ENSG00000259719	4008	TMEM260	ENSG00000070269	51292	None	None
MER4_14q22.3b	HERV	MER4	internal	chr14	56449662	56450993	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02284	ENSG00000259719	22630	TMEM260	ENSG00000070269	37361	None	None
HML3_14q22.3a	HERV	HML3	internal	chr14	57036358	57037024	-	noncoding	OTX2-AS1,AL137100.3	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000248550,ENSG00000286257	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_14q22.3a	HERV	HERVL	internal	chr14	57141671	57142623	-	noncoding	OTX2-AS1	lncRNA	ANTISENSE	ENSG00000248550	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q22.3b	HERV	ERV316A3	oneside	chr14	57254977	57257035	+	noncoding	EXOC5	protein_coding	ANTISENSE	ENSG00000070367	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_14q22.3b	HERV	HERVL	prototype	chr14	57327104	57335555	-	noncoding	AL355834.2	lncRNA	SENSE	ENSG00000286355	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_14q22.3b	HERV	HML3	oneside	chr14	57365957	57368010	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355834.1	ENSG00000259008	6547	NAA30	ENSG00000139977	22534	None	None
ERVLE_14q22.3b	HERV	ERVLE	internal	chr14	57528669	57529451	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC35F4	ENSG00000151812	34469	CCDC198	ENSG00000100557	34802	None	None
HERVL_14q23.1	HERV	HERVL	prototype	chr14	57720598	57727191	+	noncoding	SLC35F4	protein_coding	ANTISENSE	ENSG00000151812	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q23.1a	HERV	ERV316A3	oneside	chr14	57816729	57818866	+	noncoding	SLC35F4	protein_coding	ANTISENSE	ENSG00000151812	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q23.1b	HERV	ERV316A3	internal	chr14	57975466	57977196	+	noncoding	SLC35F4	protein_coding	ANTISENSE	ENSG00000151812	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q23.1c	HERV	ERV316A3	oneside	chr14	57977240	57979797	+	noncoding	SLC35F4	protein_coding	ANTISENSE	ENSG00000151812	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr14:57977319-57977579	None
HERVW_14q23.1	HERV	HERVW	oneside	chr14	58122281	58126144	+	noncoding	ARMH4	protein_coding	ANTISENSE	ENSG00000139971	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q23.1d	HERV	ERV316A3	prototype	chr14	58990246	58993160	+	noncoding	LINC01500	lncRNA	SENSE	ENSG00000258583	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_14q23.1	HERV	ERVL	oneside	chr14	59220515	59224459	-	noncoding	DAAM1	protein_coding	ANTISENSE	ENSG00000100592	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_14q23.1a	HERV	HERVH	oneside	chr14	59445365	59449785	+	noncoding	GPR135	protein_coding	ANTISENSE	ENSG00000181619	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_14q23.1	HERV	HUERSP1	prototype	chr14	59610524	59618634	+	noncoding	RTN1	protein_coding	ANTISENSE	ENSG00000139970	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_14q23.1	HERV	PRIMA4	oneside	chr14	60095023	60096839	-	noncoding	PCNX4	protein_coding	ANTISENSE	ENSG00000126773	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_14q23.1	HERV	LTR19	oneside	chr14	60096829	60098422	+	noncoding	PCNX4	protein_coding	SENSE	ENSG00000126773	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q23.1e	HERV	ERV316A3	prototype	chr14	60609914	60614330	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SALRNA1	ENSG00000258952	24886	AL049874.1	ENSG00000241354	7381	None	None
ERVLE_14q23.1	HERV	ERVLE	internal	chr14	60778446	60779505	+	noncoding	MNAT1	protein_coding	SENSE	ENSG00000020426	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_14q23.1	HERV	HERVIP10FH	internal	chr14	61114842	61121155	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRKCH	ENSG00000027075	66404	SLC38A6	ENSG00000139974	31109	None	None
HERVH_14q23.1b	HERV	HERVH	prototype	chr14	61133252	61139160	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRKCH	ENSG00000027075	48399	SLC38A6	ENSG00000139974	49519	None	None
ERV316A3_14q23.2a	HERV	ERV316A3	oneside	chr14	61675071	61676903	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HIF1A-AS1	ENSG00000258777	4138	AL355916.1	ENSG00000232774	16375	None	None
ERV316A3_14q23.2b	HERV	ERV316A3	oneside	chr14	62424578	62426920	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL389895.1	ENSG00000258638	87952	AL390816.3	ENSG00000270852	272320	None	None
ERVLB4_14q23.2	HERV	ERVLB4	internal	chr14	62628255	62630706	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCNH5	ENSG00000140015	68758	ATP5F1AP4	ENSG00000258877	22538	None	None
PRIMA41_14q23.2	HERV	PRIMA41	oneside	chr14	62748037	62752293	-	noncoding	KCNH5	protein_coding	SENSE	ENSG00000140015	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_14q23.2	HERV	PABLA	internal	chr14	62806506	62810378	+	noncoding	KCNH5	protein_coding	ANTISENSE	ENSG00000140015	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_14q23.2	HERV	HERVL	oneside	chr14	62857404	62860339	-	noncoding	KCNH5	protein_coding	SENSE	ENSG00000140015	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q23.2	HERV	ERVLE	internal	chr14	64069473	64069940	-	noncoding	SYNE2	protein_coding	ANTISENSE	ENSG00000054654	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_14q23.3	HERV	ERVLB4	oneside	chr14	65247466	65253447	-	noncoding	AL355076.2	lncRNA	SENSE	ENSG00000258760	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVL_14q23.3	HERV	ERVL	oneside	chr14	66368875	66373018	+	noncoding	AL359232.1	lncRNA	ANTISENSE	ENSG00000258561	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_14q23.3	HERV	MER4	prototype	chr14	66465513	66472030	+	noncoding	AL359232.1,CCDC196	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000258561,ENSG00000196553	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_14q23.3	HERV	HERVL40	internal	chr14	66623740	66625040	+	noncoding	GPHN	protein_coding	SENSE	ENSG00000171723	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr14:66624331-66624342
LTR25_14q23.3	HERV	LTR25	internal	chr14	66758339	66759503	-	noncoding	GPHN	protein_coding	ANTISENSE	ENSG00000171723	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_14q23.3	HERV	PABLA	internal	chr14	66788315	66789385	-	noncoding	GPHN	protein_coding	ANTISENSE	ENSG00000171723	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_14q23.3	HERV	MER61	prototype	chr14	66939377	66945419	-	noncoding	GPHN	protein_coding	ANTISENSE	ENSG00000171723	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_14q24.1	HERV	LTR57	internal	chr14	67702280	67703596	-	noncoding	RDH12	protein_coding	ANTISENSE	ENSG00000139988	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_14q24.1a	HERV	MER4	oneside	chr14	67706311	67710942	-	noncoding	RDH12	protein_coding	ANTISENSE	ENSG00000139988	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_14q24.1b	HERV	MER4	oneside	chr14	67711166	67714076	-	noncoding	RDH12	protein_coding	ANTISENSE	ENSG00000139988	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_14q24.1	HERV	MER34B	internal	chr14	68480483	68481099	+	noncoding	RAD51B	protein_coding	SENSE	ENSG00000182185	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q24.1	HERV	ERVLE	internal	chr14	69174544	69178774	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359317.2	ENSG00000258957	4243	AL391262.2	ENSG00000276063	19740	None	None
MER4_14q24.1c	HERV	MER4	oneside	chr14	69739976	69744479	-	coding	SRSF5	protein_coding	ANTISENSE	ENSG00000100650	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_14q24.1d	HERV	MER4	oneside	chr14	69745226	69747765	-	noncoding	SRSF5	protein_coding	ANTISENSE	ENSG00000100650	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_14q24.1	HERV	MER4B	internal	chr14	69745777	69747230	-	noncoding	SRSF5	protein_coding	ANTISENSE	ENSG00000100650	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_14q24.2	HERV	HML6	prototype	chr14	69811463	69816023	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL157789.1	ENSG00000221060	7132	SMOC1	ENSG00000198732	38108	None	chr14:69811822-69811836,chr14:69811846-69811853
HERVL_14q24.2a	HERV	HERVL	prototype	chr14	69821881	69827821	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SMOC1	ENSG00000198732	26310	AL157789.1	ENSG00000221060	17550	None	None
ERVLE_14q24.2	HERV	ERVLE	internal	chr14	70036555	70038176	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SMOC1	ENSG00000198732	4189	SLC8A3	ENSG00000100678	6041	None	None
ERV316A3_14q24.2a	HERV	ERV316A3	internal	chr14	70236643	70237658	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADAM21P1	ENSG00000235812	7833	AL160191.2	ENSG00000270610	1548	None	None
ERV316A3_14q24.2b	HERV	ERV316A3	oneside	chr14	70273216	70275032	-	noncoding	AL356804.1	lncRNA	ANTISENSE	ENSG00000259033	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_14q24.2a	HERV	MER4	oneside	chr14	70292312	70293484	+	noncoding	AL356804.1	lncRNA	SENSE	ENSG00000259033	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_14q24.2a	HERV	HERVH	prototype	chr14	70293487	70301929	-	noncoding	AL356804.1	lncRNA	ANTISENSE	ENSG00000259033	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_14q24.2b	HERV	MER4	internal	chr14	70301930	70304747	+	noncoding	AL356804.1	lncRNA	SENSE	ENSG00000259033	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_14q24.2c	HERV	MER4	oneside	chr14	70311202	70314961	+	noncoding	AL356804.1	lncRNA	SENSE	ENSG00000259033	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH48_14q24.2	HERV	HERVH48	prototype	chr14	70344652	70350485	+	coding	COX16,SYNJ2BP-COX16	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000133983,ENSG00000258644	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_14q24.2	HERV	MER61	internal	chr14	70399662	70400440	-	noncoding	COX16,SYNJ2BP-COX16,SYNJ2BP	protein_coding,protein_coding,protein_coding	SENSE,SENSE,SENSE	ENSG00000133983,ENSG00000258644,ENSG00000213463	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR23_14q24.2	HERV	LTR23	internal	chr14	70402689	70404833	+	noncoding	COX16,SYNJ2BP-COX16,SYNJ2BP	protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000133983,ENSG00000258644,ENSG00000213463	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q24.2c	HERV	ERV316A3	internal	chr14	70427732	70428364	-	noncoding	AL357153.2	lncRNA	SENSE	ENSG00000257759	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_14q24.2b	HERV	HERVL	prototype	chr14	70431965	70436463	-	noncoding	AL357153.2	lncRNA	SENSE	ENSG00000257759	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_14q24.2	HERV	HERV3	prototype	chr14	70436464	70443477	-	noncoding	AL357153.2	lncRNA	SENSE	ENSG00000257759	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_14q24.2	HERV	LTR25	internal	chr14	70444440	70446634	-	noncoding	AL357153.2	lncRNA	SENSE	ENSG00000257759	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q24.2d	HERV	ERV316A3	internal	chr14	70464616	70465633	+	noncoding	AL357153.2,ADAM20P1	lncRNA,transcribed_unprocessed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000257759,ENSG00000259158	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q24.2e	HERV	ERV316A3	oneside	chr14	70514889	70519285	+	noncoding	AL357153.2	lncRNA	ANTISENSE	ENSG00000257759	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_14q24.2	HERV	LTR19	prototype	chr14	70536570	70544333	+	noncoding	AL357153.2	lncRNA	ANTISENSE	ENSG00000257759	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_14q24.2a	HERV	MER41	internal	chr14	70865494	70869706	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004825.2	ENSG00000274818	36951	AC004825.1	ENSG00000258431	6065	None	None
MER41_14q24.2b	HERV	MER41	internal	chr14	70870019	70872265	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004825.2	ENSG00000274818	34392	AC004825.1	ENSG00000258431	10590	None	None
HERVH_14q24.2b	HERV	HERVH	prototype	chr14	71124207	71130006	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PCNX1	ENSG00000100731	8825	AC004817.3	ENSG00000269927	11119	None	None
ERV316A3_14q24.2f	HERV	ERV316A3	unknown	chr14	71132407	71138320	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004817.3	ENSG00000269927	2805	PCNX1	ENSG00000100731	17025	None	None
HERVL_14q24.2c	HERV	HERVL	prototype	chr14	71459383	71466120	-	coding	SIPA1L1	protein_coding	ANTISENSE	ENSG00000197555	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_14q24.2d	HERV	HERVL	prototype	chr14	71935985	71941877	-	noncoding	RGS6	protein_coding	ANTISENSE	ENSG00000182732	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_14q24.2c	HERV	HERVH	prototype	chr14	73128452	73134036	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSEN1	ENSG00000080815	2382	RBM25	ENSG00000119707	4553	None	None
LTR25_14q24.3	HERV	LTR25	internal	chr14	73601155	73607029	-	coding	AC005225.2	lncRNA	SENSE	ENSG00000258603	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_14q24.3a	HERV	HERVH	prototype	chr14	73703339	73709213	+	noncoding	DNAL1	protein_coding	SENSE	ENSG00000119661	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q24.3	HERV	ERVLE	internal	chr14	74794530	74795378	-	noncoding	YLPM1	protein_coding	ANTISENSE	ENSG00000119596	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_14q24.3b	HERV	HERVH	prototype	chr14	75580498	75586497	-	noncoding	FLVCR2	protein_coding	ANTISENSE	ENSG00000119686	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_14q24.3	HERV	HERVL40	prototype	chr14	77314097	77319837	+	noncoding	POMT2	protein_coding	ANTISENSE	ENSG00000009830	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chr14:77314231-77314519	None
HERVFRD_14q24.3a	HERV	HERVFRD	oneside	chr14	77629942	77633610	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	COX6CP11	ENSG00000258668	19217	SPTLC2	ENSG00000100596	13169	None	None
HERVFRD_14q24.3b	HERV	HERVFRD	oneside	chr14	77633823	77636646	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	COX6CP11	ENSG00000258668	16181	SPTLC2	ENSG00000100596	17050	None	None
ERVLB4_14q31.1a	HERV	ERVLB4	prototype	chr14	79927248	79931851	-	noncoding	AF123462.1	lncRNA	SENSE	ENSG00000258416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q31.1a	HERV	ERV316A3	oneside	chr14	80013757	80014676	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF123462.1	ENSG00000258416	39588	DIO2	ENSG00000211448	182851	None	None
HERVL_14q31.1a	HERV	HERVL	prototype	chr14	80224810	80231256	-	noncoding	DIO2,DIO2-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000211448,ENSG00000258766	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr14:80231053-80231059
ERVLE_14q31.1a	HERV	ERVLE	internal	chr14	80414381	80415487	+	noncoding	DIO2-AS1	lncRNA	SENSE	ENSG00000258766	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_14q31.1	HERV	HML5	prototype	chr14	80464388	80473042	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DIO2-AS1	ENSG00000258766	8919	CEP128	ENSG00000100629	3941	None	None
ERVLE_14q31.1b	HERV	ERVLE	internal	chr14	80968503	80971945	-	noncoding	TSHR	protein_coding	ANTISENSE	ENSG00000165409	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q31.1b	HERV	ERV316A3	oneside	chr14	80976240	80978766	-	noncoding	TSHR	protein_coding	ANTISENSE	ENSG00000165409	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr14:80976591-80976987	chr14:80977976-80977979,chr14:80977989-80977999
ERVLB4_14q31.1b	HERV	ERVLB4	oneside	chr14	81230150	81234145	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136040.1	ENSG00000273783	7690	DYNLL1P1	ENSG00000205579	12150	None	None
HERVL_14q31.1b	HERV	HERVL	oneside	chr14	81844100	81849084	-	noncoding	AL355838.1	lncRNA	ANTISENSE	ENSG00000259035	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_14q31.1a	HERV	MER61	internal	chr14	81852498	81853510	-	noncoding	AL355838.1	lncRNA	ANTISENSE	ENSG00000259035	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q31.1c	HERV	ERVLE	internal	chr14	82042565	82043187	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355838.1	ENSG00000259035	12216	AL357095.1	ENSG00000276782	386685	None	None
ERVL_14q31.1	HERV	ERVL	oneside	chr14	82056694	82060900	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357095.1	ENSG00000276782	368972	AL355838.1	ENSG00000259035	26345	None	None
HERVH_14q31.1	HERV	HERVH	oneside	chr14	82060903	82065781	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357095.1	ENSG00000276782	364091	AL355838.1	ENSG00000259035	30554	None	None
MER41_14q31.1	HERV	MER41	internal	chr14	82162333	82166408	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355838.1	ENSG00000259035	131984	AL357095.1	ENSG00000276782	263464	None	None
MER61_14q31.1b	HERV	MER61	oneside	chr14	82870214	82873105	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355095.1	ENSG00000258683	73993	AL359238.1	ENSG00000258600	144001	None	None
HERVL_14q31.2	HERV	HERVL	prototype	chr14	83351968	83353324	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-51P	ENSG00000252369	303328	RNU6ATAC28P	ENSG00000238561	397060	None	None
PRIMA41_14q31.2	HERV	PRIMA41	oneside	chr14	83954465	83959572	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02305	ENSG00000258532	39088	AL356807.1	ENSG00000285826	27204	None	None
ERV316A3_14q31.2	HERV	ERV316A3	internal	chr14	83965475	83966579	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356807.1	ENSG00000285826	20197	LINC02305	ENSG00000258532	50098	None	None
ERVLE_14q31.3a	HERV	ERVLE	internal	chr14	84438524	84439648	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-976P	ENSG00000251895	300294	MTCYBP27	ENSG00000259012	261436	None	None
HERVH_14q31.3a	HERV	HERVH	prototype	chr14	84500250	84505973	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-976P	ENSG00000251895	233969	MTCYBP27	ENSG00000259012	323162	None	None
ERVLB4_14q31.3a	HERV	ERVLB4	internal	chr14	84847757	84848558	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-976P	ENSG00000251895	107705	AL163642.1	ENSG00000258506	102716	None	None
HERVL_14q31.3a	HERV	HERVL	prototype	chr14	85260794	85263704	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049775.2	ENSG00000258902	98753	AL357172.1	ENSG00000259044	21320	None	None
ERVLE_14q31.3b	HERV	ERVLE	internal	chr14	85641752	85644600	+	coding	FLRT2	protein_coding	SENSE	ENSG00000185070	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q31.3c	HERV	ERVLE	internal	chr14	85644643	85648216	+	noncoding	FLRT2	protein_coding	SENSE	ENSG00000185070	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVL_14q31.3	HERV	ERVL	internal	chr14	85716982	85718016	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FLRT2	ENSG00000185070	62554	LINC02328	ENSG00000258733	193422	None	None
HERVH_14q31.3b	HERV	HERVH	prototype	chr14	85732437	85738601	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02328	ENSG00000258733	172837	FLRT2	ENSG00000185070	78009	None	None
HERVL_14q31.3b	HERV	HERVL	prototype	chr14	85927831	85934155	-	noncoding	LINC02328	lncRNA	ANTISENSE	ENSG00000258733	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_14q31.3b	HERV	ERVLB4	oneside	chr14	86017276	86020045	-	noncoding	LINC02328,LINC02316	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000258733,ENSG00000258912	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q31.3d	HERV	ERVLE	internal	chr14	86088258	86089654	-	noncoding	LINC02328	lncRNA	ANTISENSE	ENSG00000258733	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q31.3e	HERV	ERVLE	internal	chr14	86147270	86149297	-	noncoding	LINC02328	lncRNA	ANTISENSE	ENSG00000258733	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_14q31.3c	HERV	HERVL	oneside	chr14	86415606	86417546	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01148	ENSG00000258804	488232	LINC02309	ENSG00000258994	14321	None	None
HERVH_14q31.3c	HERV	HERVH	prototype	chr14	86731586	86737060	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02309	ENSG00000258994	330301	LINC01148	ENSG00000258804	168718	None	chr14:86733793-86733807
ERVLE_14q31.3f	HERV	ERVLE	internal	chr14	86954771	86956582	+	noncoding	AL358292.1	lncRNA	SENSE	ENSG00000259061	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_14q31.3d	HERV	HERVH	prototype	chr14	87234691	87240791	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL352955.1	ENSG00000258496	10312	AL358292.1	ENSG00000259061	245566	chr14:87240398-87240777	None
ERVLB4_14q31.3c	HERV	ERVLB4	internal	chr14	87261429	87262472	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL352955.1	ENSG00000258496	9750	AL157688.1	ENSG00000258958	61281	None	None
ERVLE_14q31.3g	HERV	ERVLE	internal	chr14	87709811	87711608	-	noncoding	AL359237.1	lncRNA	SENSE	ENSG00000258807	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr14:87710791-87710795
ERVLB4_14q31.3d	HERV	ERVLB4	oneside	chr14	87786721	87792168	-	noncoding	AL359237.1	lncRNA	SENSE	ENSG00000258807	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q31.3	HERV	ERV316A3	prototype	chr14	87867274	87869900	-	noncoding	AL359237.1,GALC	lncRNA,protein_coding	SENSE,SENSE	ENSG00000258807,ENSG00000054983	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_14q31.3	HERV	MER34B	oneside	chr14	87961572	87962436	+	noncoding	GALC	protein_coding	ANTISENSE	ENSG00000054983	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr14:87962315-87962634	None
ERVLE_14q31.3h	HERV	ERVLE	internal	chr14	88028241	88034300	-	noncoding	LINC01147,LINC01146	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000258826,ENSG00000258867	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr14:88029553-88029668	None
HUERSP2_14q31.3	HERV	HUERSP2	prototype	chr14	88142424	88146832	+	noncoding	AL133279.2	lncRNA	ANTISENSE	ENSG00000258975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_14q32.11	HERV	ERVL	prototype	chr14	89650032	89651323	+	noncoding	AL137230.3,AL137230.1	lncRNA,misc_RNA	ANTISENSE,ANTISENSE	ENSG00000259053,ENSG00000252655	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr14:89650653-89650825	None
MER41_14q32.11a	HERV	MER41	prototype	chr14	89684033	89685733	+	noncoding	AL137230.3	lncRNA	ANTISENSE	ENSG00000259053	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q32.11a	HERV	ERV316A3	oneside	chr14	89703089	89706122	-	noncoding	AL137230.3	lncRNA	SENSE	ENSG00000259053	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr14:89703954-89704191	None
ERVLB4_14q32.11a	HERV	ERVLB4	prototype	chr14	89743779	89746509	+	noncoding	AL137230.3	lncRNA	ANTISENSE	ENSG00000259053	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_14q32.11	HERV	HERVL	oneside	chr14	90227625	90233938	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCNK13	ENSG00000152315	41772	PSMC1	ENSG00000100764	22589	None	chr14:90233686-90233693
MER4B_14q32.11a	HERV	MER4B	oneside	chr14	90238596	90240078	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCNK13	ENSG00000152315	52743	PSMC1	ENSG00000100764	16449	None	None
MER4B_14q32.11b	HERV	MER4B	internal	chr14	90240386	90249373	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCNK13	ENSG00000152315	54533	PSMC1	ENSG00000100764	7154	None	None
MER41_14q32.11b	HERV	MER41	oneside	chr14	90472533	90477165	+	noncoding	LINC00642	lncRNA	SENSE	ENSG00000233208	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q32.11b	HERV	ERV316A3	internal	chr14	90878667	90879383	+	noncoding	RPS6KA5	protein_coding	ANTISENSE	ENSG00000100784	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11_14q32.11	HERV	HERVK11	oneside	chr14	90951168	90954214	+	noncoding	RPS6KA5	protein_coding	ANTISENSE	ENSG00000100784	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_14q32.11b	HERV	ERVLB4	unknown	chr14	91016539	91019592	+	noncoding	RPS6KA5	protein_coding	ANTISENSE	ENSG00000100784	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr14:91016864-91016865
ERV316A3_14q32.11c	HERV	ERV316A3	oneside	chr14	91036521	91038059	-	noncoding	RPS6KA5	protein_coding	SENSE	ENSG00000100784	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_14q32.11	HERV	HERVW	oneside	chr14	91225665	91226868	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GPR68	ENSG00000119714	5664	DGLUCY	ENSG00000133943	33	None	None
MER4_14q32.12a	HERV	MER4	internal	chr14	91594660	91595344	-	noncoding	CATSPERB	protein_coding	SENSE	ENSG00000133962	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_14q32.12b	HERV	MER4	oneside	chr14	91595467	91599986	-	coding	CATSPERB	protein_coding	SENSE	ENSG00000133962	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_14q32.12	HERV	LTR57	internal	chr14	91678258	91679170	+	noncoding	CATSPERB	protein_coding	ANTISENSE	ENSG00000133962	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_14q32.12	HERV	PRIMA41	internal	chr14	91679851	91683021	+	noncoding	CATSPERB	protein_coding	ANTISENSE	ENSG00000133962	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q32.12a	HERV	ERVLE	oneside	chr14	91744758	91745958	+	noncoding	CATSPERB	protein_coding	ANTISENSE	ENSG00000133962	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr14:91745445-91745673	None
HERVH_14q32.12a	HERV	HERVH	prototype	chr14	92041755	92049821	-	noncoding	ATXN3	protein_coding	SENSE	ENSG00000066427	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_14q32.12	HERV	HERVIP10F	oneside	chr14	92625544	92628166	-	noncoding	AL159141.1	protein_coding	ANTISENSE	ENSG00000100599	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr14:92627937-92627940
HERVH_14q32.12b	HERV	HERVH	oneside	chr14	92759739	92763541	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LGMN	ENSG00000100600	11060	GOLGA5	ENSG00000066455	30764	None	None
HERVL_14q32.12	HERV	HERVL	oneside	chr14	93357289	93361341	+	coding	UNC79	protein_coding	SENSE	ENSG00000133958	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_14q32.12c	HERV	HERVH	prototype	chr14	93559392	93564970	-	noncoding	UNC79	protein_coding	ANTISENSE	ENSG00000133958	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q32.12b	HERV	ERVLE	internal	chr14	93792638	93794584	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRIMA1	ENSG00000175785	4153	AL132642.2	ENSG00000279593	101178	None	None
MER41_14q32.12	HERV	MER41	oneside	chr14	94089107	94092704	-	noncoding	IFI27L1	protein_coding	ANTISENSE	ENSG00000165948	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_14q32.13	HERV	MER41	oneside	chr14	95275153	95281858	+	noncoding	CLMN	protein_coding	ANTISENSE	ENSG00000165959	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_14q32.2a	HERV	HERVH	prototype	chr14	95973031	95978860	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUNAR	ENSG00000250366	47460	AL137190.1	ENSG00000271358	40624	None	None
HERVFRD_14q32.2	HERV	HERVFRD	prototype	chr14	96112157	96118463	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BDKRB2	ENSG00000168398	86216	C14orf132	ENSG00000227051	18268	None	None
ERV316A3_14q32.2a	HERV	ERV316A3	oneside	chr14	96635852	96639416	-	noncoding	RN7SKP108	misc_RNA	SENSE	ENSG00000223299	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_14q32.2b	HERV	HERVH	prototype	chr14	98446793	98452574	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL132719.1	ENSG00000258795	44558	RN7SL714P	ENSG00000241757	95129	None	None
HERVH_14q32.2c	HERV	HERVH	prototype	chr14	98985205	98992939	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL162151.2	ENSG00000234648	11734	AL162151.3	ENSG00000287991	6632	None	None
ERV316A3_14q32.2b	HERV	ERV316A3	oneside	chr14	99029152	99030832	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL162151.3	ENSG00000287991	25607	AL162151.1	ENSG00000229402	127584	None	None
MER41_14q32.2	HERV	MER41	prototype	chr14	99901390	99906744	-	noncoding	EML1	protein_coding	ANTISENSE	ENSG00000066629	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_14q32.2	HERV	MER4	prototype	chr14	100000066	100007471	-	coding	EVL	protein_coding	ANTISENSE	ENSG00000196405	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q32.2a	HERV	ERVLE	internal	chr14	100650238	100653268	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00523	ENSG00000196273	3982	AL163974.1	ENSG00000258576	60912	None	None
ERVLE_14q32.2b	HERV	ERVLE	oneside	chr14	100743978	100751780	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DLK1	ENSG00000185559	5754	MEG3	ENSG00000214548	27630	None	None
ERV316A3_14q32.2c	HERV	ERV316A3	oneside	chr14	100752664	100753660	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MEG3	ENSG00000214548	25750	DLK1	ENSG00000185559	14440	None	None
ERV316A3_14q32.2d	HERV	ERV316A3	oneside	chr14	100762499	100766490	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MEG3	ENSG00000214548	12920	DLK1	ENSG00000185559	24275	None	None
MER34B_14q32.31	HERV	MER34B	internal	chr14	101089848	101096984	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL132709.7	ENSG00000230805	11938	AL132709.8	ENSG00000288302	23530	None	None
HERVH_14q32.31a	HERV	HERVH	prototype	chr14	101305254	101311247	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355096.1	ENSG00000258460	21264	AL359682.1	ENSG00000258497	26936	None	None
HERVIP10F_14q32.31	HERV	HERVIP10F	prototype	chr14	101315699	101324134	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359682.1	ENSG00000258497	37381	AL355096.1	ENSG00000258460	8377	None	None
ERV316A3_14q32.31a	HERV	ERV316A3	prototype	chr14	101508826	101512013	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049836.2	ENSG00000259166	51709	DIO3OS	ENSG00000258498	40208	None	None
ERV316A3_14q32.31b	HERV	ERV316A3	prototype	chr14	101590543	101596912	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DIO3	ENSG00000197406	27091	AL049836.1	ENSG00000258919	32072	None	None
PABLA_14q32.31	HERV	PABLA	internal	chr14	101676420	101677554	-	noncoding	LINC02320	lncRNA	SENSE	ENSG00000258404	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_14q32.31a	HERV	MER4	internal	chr14	101678431	101681932	-	coding	LINC02320	lncRNA	SENSE	ENSG00000258404	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_14q32.31b	HERV	MER4	oneside	chr14	101682157	101685521	-	noncoding	LINC02320	lncRNA	SENSE	ENSG00000258404	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH21_14q32.31a	HERV	HERVFH21	oneside	chr14	102233835	102239533	+	noncoding	MOK	protein_coding	ANTISENSE	ENSG00000080823	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chr14:102236332-102236686	chr14:102235403-102235431,chr14:102235444-102235487,chr14:102235562-102235599,chr14:102237838-102237865,chr14:102238314-102238320,chr14:102238363-102238368,chr14:102238387-102238402,chr14:102238442-102238445,chr14:102238451-102238464,chr14:102238469-102238477,chr14:102238493-102238504,chr14:102239492-102239503
HERVH_14q32.31b	HERV	HERVH	prototype	chr14	102239957	102245769	+	noncoding	MOK	protein_coding	ANTISENSE	ENSG00000080823	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chr14:102241304-102241436	chr14:102240602-102240642,chr14:102240647-102240648
HERVFH21_14q32.31b	HERV	HERVFH21	oneside	chr14	102246200	102248497	+	noncoding	MOK	protein_coding	ANTISENSE	ENSG00000080823	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr14:102247477-102247488,chr14:102247491-102247507,chr14:102247514-102247521,chr14:102247526-102247536,chr14:102247542-102247556
HERVH_14q32.31c	HERV	HERVH	oneside	chr14	102410504	102411706	+	noncoding	TECPR2	protein_coding	SENSE	ENSG00000196663	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_14q32.32	HERV	MER41	prototype	chr14	102856187	102861776	-	noncoding	TRAF3	protein_coding	ANTISENSE	ENSG00000131323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q32.32a	HERV	ERVLE	internal	chr14	103065568	103066764	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDC42BPB	ENSG00000198752	8019	LBHD2	ENSG00000283071	17446	None	None
ERVLE_14q32.32b	HERV	ERVLE	internal	chr14	103141765	103143466	-	noncoding	NDUFB4P11	transcribed_processed_pseudogene	ANTISENSE	ENSG00000259374	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q32.32c	HERV	ERVLE	internal	chr14	103145982	103149852	-	noncoding	RPL21P12	processed_pseudogene	ANTISENSE	ENSG00000259535	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML1_14q32.32	HERV	HML1	oneside	chr14	103169999	103174858	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL21P12	ENSG00000259535	20591	GCSHP2	ENSG00000259525	9346	None	None
MER101_14q32.32	HERV	MER101	internal	chr14	103181249	103183734	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL21P12	ENSG00000259535	31841	GCSHP2	ENSG00000259525	470	None	None
ERVLE_14q32.32d	HERV	ERVLE	internal	chr14	103210314	103214436	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL21P13	ENSG00000242837	27056	AL161669.3	ENSG00000278071	1438	None	None
HML3_14q32.32	HERV	HML3	prototype	chr14	103233998	103239485	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161669.3	ENSG00000278071	25122	RPL21P13	ENSG00000242837	2007	None	None
ERV316A3_14q32.32	HERV	ERV316A3	internal	chr14	103354907	103355857	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P26	ENSG00000259428	8382	EIF5	ENSG00000100664	9882	None	None
ERVLE_14q32.33a	HERV	ERVLE	internal	chr14	103989420	103990330	-	noncoding	TDRD9	protein_coding	ANTISENSE	ENSG00000156414	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_14q32.33a	HERV	ERVLB4	prototype	chr14	104463215	104469719	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM179	ENSG00000258986	4959	CEND1P1	ENSG00000213159	11782	None	None
ERVLE_14q32.33b	HERV	ERVLE	internal	chr14	104520054	104522034	+	noncoding	TMEM179	protein_coding	ANTISENSE	ENSG00000258986	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14q32.33c	HERV	ERVLE	internal	chr14	104558162	104558583	+	noncoding	TMEM179	protein_coding	ANTISENSE	ENSG00000258986	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14q32.33	HERV	ERV316A3	internal	chr14	104608641	104609935	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL583722.3	ENSG00000258736	43613	TMEM179	ENSG00000258986	2994	None	None
MER4_14q32.33a	HERV	MER4	oneside	chr14	105031317	105039940	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CDCA4	ENSG00000170779	10234	GPR132	ENSG00000183484	9455	chr14:105036417-105036444	chr14:105032838-105032864
LTR57_14q32.33a	HERV	LTR57	internal	chr14	105035201	105036265	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDCA4	ENSG00000170779	14118	GPR132	ENSG00000183484	13130	None	None
ERVLE_14q32.33d	HERV	ERVLE	internal	chr14	105116052	105117546	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512356.5	ENSG00000287459	9204	AL512356.2	ENSG00000258154	3189	None	None
LTR57_14q32.33b	HERV	LTR57	internal	chr14	105129954	105131880	+	noncoding	AL512356.5	lncRNA	ANTISENSE	ENSG00000287459	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_14q32.33	HERV	HML2	oneside	chr14	105673313	105676203	+	noncoding	ELK2AP	processed_pseudogene	ANTISENSE	ENSG00000213140	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER101_14q32.33	HERV	MER101	oneside	chr14	105819847	105825276	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	IGHD	ENSG00000211898	11489	AL122127.1	ENSG00000270371	34016	None	None
HERVL_14q32.33a	HERV	HERVL	oneside	chr14	105965186	105966980	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGHVII-1-1	ENSG00000254279	19797	ADAM6	ENSG00000271968	2749	None	None
HERVL32_14q32.33a	HERV	HERVL32	oneside	chr14	105981942	105985336	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGHV1-2	ENSG00000211934	1246	AC246787.1	ENSG00000225200	2796	None	None
HUERSP1_14q32.33	HERV	HUERSP1	internal	chr14	106052327	106053583	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	IGHV3-6	ENSG00000253763	1966	IGHVIII-5-2	ENSG00000254053	6467	None	None
HERVL_14q32.33b	HERV	HERVL	oneside	chr14	106096300	106097875	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGHV5-10-1	ENSG00000282651	10097	IGHV3-64D	ENSG00000282639	7727	None	None
MER4B_14q32.33a	HERV	MER4B	internal	chr14	106109049	106110373	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGHV3-11	ENSG00000211941	6262	IGHV5-10-1	ENSG00000282651	585	None	None
MER4_14q32.33b	HERV	MER4	oneside	chr14	106135482	106140504	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGHVIII-13-1	ENSG00000253412	1783	IGHV3-13	ENSG00000211942	5410	None	None
HERVS71_14q32.33	HERV	HERVS71	prototype	chr14	106196991	106207472	-	coding	AC247036.1	lncRNA	ANTISENSE	ENSG00000271201	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_14q32.33a	HERV	PRIMA41	internal	chr14	106404418	106405508	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGHV3-38	ENSG00000211958	4985	IGHV3-37	ENSG00000253359	7304	None	None
MER4_14q32.33c	HERV	MER4	oneside	chr14	106411423	106416851	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGHVIII-38-1	ENSG00000253989	1167	IGHV3-38	ENSG00000211958	402	None	None
MER4B_14q32.33b	HERV	MER4B	internal	chr14	106465489	106466214	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGHV3-43	ENSG00000232216	4050	IGHV3-42	ENSG00000254228	1798	None	None
PRIMA41_14q32.33b	HERV	PRIMA41	internal	chr14	106485368	106488054	-	noncoding	LINC00221	lncRNA	ANTISENSE	ENSG00000270816	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_14q32.33d	HERV	MER4	unknown	chr14	106522793	106529622	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGHVIII-47-1	ENSG00000253862	1519	LINC00221	ENSG00000270816	1720	None	None
ERVLB4_14q32.33b	HERV	ERVLB4	oneside	chr14	106567399	106568555	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGHV5-51	ENSG00000211966	10189	IGHV3-50	ENSG00000253241	844	None	None
MER4B_14q32.33c	HERV	MER4B	internal	chr14	106580115	106580779	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGHV8-51-1	ENSG00000254167	2727	IGHV5-51	ENSG00000211966	879	None	None
LTR25_14q32.33a	HERV	LTR25	internal	chr14	106594611	106595477	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGHV3-53	ENSG00000211967	1264	IGHVII-53-1	ENSG00000253714	4193	None	None
LTR25_14q32.33b	HERV	LTR25	internal	chr14	106645387	106646166	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGHV3-62	ENSG00000253132	1802	IGHVII-62-1	ENSG00000253747	4385	None	None
HML5_14q32.33a	HERV	HML5	prototype	chr14	106697994	106703125	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGHVIII-67-4	ENSG00000254052	2597	IGHV1-68	ENSG00000253703	721	None	None
HML5_14q32.33b	HERV	HML5	prototype	chr14	106744465	106749566	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGHV1-69-2	ENSG00000281990	6918	AC245369.2	ENSG00000283571	723	None	None
HERVL32_14q32.33b	HERV	HERVL32	oneside	chr14	106792085	106793413	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGHV3-73	ENSG00000211976	9281	IGHV3-72	ENSG00000225698	852	None	None
HERVL_14q32.33c	HERV	HERVL	oneside	chr14	106832814	106834073	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR5195	ENSG00000265929	16812	IGHVIII-76-1	ENSG00000253310	762	None	None
HERV3_14q32.33	HERV	HERV3	prototype	chr14	106836061	106845981	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR5195	ENSG00000265929	4904	IGHVIII-76-1	ENSG00000253310	4009	chr14:106844717-106845202,chr14:106845827-106846087	chr14:106844858-106844883,chr14:106844959-106844962,chr14:106844973-106844984,chr14:106845065-106845082,chr14:106845797-106845816,chr14:106845842-106845857,chr14:106844732-106844762,chr14:106845827-106845837
MER4B_14q32.33d	HERV	MER4B	internal	chr14	106852618	106853459	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGHVII-78-1	ENSG00000253674	12168	IGHV5-78	ENSG00000211978	1201	None	None
ERVLE_15q11.1	HERV	ERVLE	internal	chr15	19839067	19839682	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	AC138701.1	ENSG00000215567	38873	None	None
ERV316A3_15q11.1a	HERV	ERV316A3	oneside	chr15	19852611	19853873	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138701.1	ENSG00000215567	24682	NA	NA	NA	None	None
ERV316A3_15q11.1b	HERV	ERV316A3	internal	chr15	19853927	19855134	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138701.1	ENSG00000215567	23421	NA	NA	NA	None	None
HERVI_15q11.1	HERV	HERVI	oneside	chr15	19887884	19890348	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138701.1	ENSG00000215567	70	AC138701.2	ENSG00000258463	8986	None	chr15:19888316-19888319
HERVL_15q11.1	HERV	HERVL	oneside	chr15	20041343	20043131	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM30B	ENSG00000277988	27135	AC127381.1	ENSG00000259769	3165	None	None
ERVLB4_15q11.1a	HERV	ERVLB4	internal	chr15	20119705	20120822	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087386.1	ENSG00000258410	7923	RN7SL584P	ENSG00000239471	23676	None	None
ERVLB4_15q11.1b	HERV	ERVLB4	internal	chr15	20175984	20176527	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC126603.1	ENSG00000258628	52093	BMS1P15	ENSG00000258780	15158	None	None
ERVLB4_15q11.1c	HERV	ERVLB4	internal	chr15	20332728	20333829	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026495.2	ENSG00000287122	1145	AC026495.1	ENSG00000258654	10907	None	None
HUERSP1_15q11.2	HERV	HUERSP1	oneside	chr15	20601976	20608903	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPATA31E2P	ENSG00000258916	2781	AC023310.2	ENSG00000258707	17916	None	None
MER4_15q11.2a	HERV	MER4	internal	chr15	20830382	20831317	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3118-2	ENSG00000265322	1478	AC012414.1	ENSG00000259214	3742	None	None
HERVL_15q11.2	HERV	HERVL	oneside	chr15	21048053	21049862	+	noncoding	LINC01193	lncRNA	SENSE	ENSG00000258710	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q11.2a	HERV	ERVLB4	internal	chr15	21126243	21127360	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC126335.1	ENSG00000260986	338	RN7SL400P	ENSG00000243059	23105	None	None
ERVLB4_15q11.2b	HERV	ERVLB4	internal	chr15	21182511	21183054	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068446.3	ENSG00000258883	67126	BMS1P16	ENSG00000258684	15154	None	None
MER4_15q11.2b	HERV	MER4	internal	chr15	21403950	21404886	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3118-3	ENSG00000277243	1499	GRAMD4P6	ENSG00000258848	19886	None	None
ERV316A3_15q11.2a	HERV	ERV316A3	internal	chr15	21593404	21594120	-	noncoding	LINC02203	protein_coding	ANTISENSE	ENSG00000280709	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_15q11.2a	HERV	HERVL74	oneside	chr15	21695842	21699617	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC135068.7	ENSG00000281113	3811	AC135068.4	ENSG00000279445	11880	None	None
HERVL32_15q11.2a	HERV	HERVL32	internal	chr15	21713163	21714889	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC135068.8	ENSG00000281179	2919	AC135068.6	ENSG00000281087	2893	None	None
HERVL32_15q11.2b	HERV	HERVL32	oneside	chr15	21715010	21716557	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC135068.8	ENSG00000281179	1251	AC135068.6	ENSG00000281087	4740	None	None
MER4_15q11.2c	HERV	MER4	internal	chr15	21841337	21842272	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3118-4	ENSG00000265793	1478	AC134981.1	ENSG00000280655	88627	None	None
ERV316A3_15q11.2b	HERV	ERV316A3	internal	chr15	22028723	22029439	-	noncoding	AC134980.2,AC134980.3	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000284500,ENSG00000285472	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_15q11.2b	HERV	HERVL74	oneside	chr15	22138324	22142099	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010760.1	ENSG00000260739	3840	OR4N3P	ENSG00000259435	11890	None	None
HERVL32_15q11.2c	HERV	HERVL32	internal	chr15	22155786	22157512	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGHV1OR15-1	ENSG00000270505	2919	RPS8P10	ENSG00000223877	2889	None	None
HERVL32_15q11.2d	HERV	HERVL32	oneside	chr15	22157633	22159180	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGHV1OR15-1	ENSG00000270505	1251	RPS8P10	ENSG00000223877	4736	None	None
ERVLB4_15q11.2c	HERV	ERVLB4	oneside	chr15	23469077	23475176	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4508	ENSG00000265673	86886	GOLGA6L2	ENSG00000174450	21834	None	None
MER61_15q11.2a	HERV	MER61	oneside	chr15	23477468	23480402	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GOLGA6L2	ENSG00000174450	30225	MIR4508	ENSG00000265673	81660	None	None
MER61_15q11.2b	HERV	MER61	internal	chr15	23480903	23483841	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GOLGA6L2	ENSG00000174450	33660	MIR4508	ENSG00000265673	78221	None	None
HERVL74_15q11.2c	HERV	HERVL74	internal	chr15	23496691	23499273	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4508	ENSG00000265673	62789	GOLGA6L2	ENSG00000174450	49448	None	None
LTR25_15q11.2	HERV	LTR25	internal	chr15	23504112	23511588	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4508	ENSG00000265673	50474	GOLGA6L2	ENSG00000174450	56869	None	chr15:23504152-23504179
HERVL74_15q11.2d	HERV	HERVL74	internal	chr15	23538428	23540642	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GOLGA6L2	ENSG00000174450	91185	MIR4508	ENSG00000265673	21420	None	None
ERVLB4_15q11.2d	HERV	ERVLB4	oneside	chr15	23544674	23546901	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4508	ENSG00000265673	15161	GOLGA6L2	ENSG00000174450	97431	None	None
ERVLB4_15q11.2e	HERV	ERVLB4	internal	chr15	23547017	23547783	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4508	ENSG00000265673	14279	GOLGA6L2	ENSG00000174450	99774	None	None
HML3_15q11.2	HERV	HML3	prototype	chr15	23695617	23701966	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087490.1	ENSG00000286973	55149	NDN	ENSG00000182636	8312	None	None
ERVLB4_15q11.2f	HERV	ERVLB4	oneside	chr15	23981589	23982626	-	noncoding	PWRN4	lncRNA	ANTISENSE	ENSG00000260232	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q11.2g	HERV	ERVLB4	internal	chr15	23995873	23997597	-	noncoding	PWRN4	lncRNA	ANTISENSE	ENSG00000260232	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q11.2h	HERV	ERVLB4	oneside	chr15	24001954	24005106	-	noncoding	PWRN4	lncRNA	ANTISENSE	ENSG00000260232	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV4_15q11.2	HERV	HERV4	prototype	chr15	24030131	24032173	-	noncoding	PWRN4	lncRNA	ANTISENSE	ENSG00000260232	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_15q11.2a	HERV	PRIMA41	internal	chr15	24034914	24036049	+	noncoding	PWRN4	lncRNA	SENSE	ENSG00000260232	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_15q11.2a	HERV	MER41	internal	chr15	24063543	24067233	-	noncoding	PWRN4	lncRNA	ANTISENSE	ENSG00000260232	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_15q11.2	HERV	HERVFRD	oneside	chr15	24067228	24069565	-	noncoding	PWRN4	lncRNA	ANTISENSE	ENSG00000260232	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q11.2i	HERV	ERVLB4	internal	chr15	24069566	24072097	-	noncoding	PWRN4	lncRNA	ANTISENSE	ENSG00000260232	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q11.2j	HERV	ERVLB4	internal	chr15	24083063	24089605	-	noncoding	PWRN4	lncRNA	ANTISENSE	ENSG00000260232	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVL_15q11.2a	HERV	ERVL	oneside	chr15	24145878	24147077	-	noncoding	PWRN1	lncRNA	ANTISENSE	ENSG00000259905	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLB_15q11.2a	HERV	PABLB	internal	chr15	24163766	24168986	-	noncoding	PWRN1,PWRN2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000259905,ENSG00000260551	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVL_15q11.2b	HERV	ERVL	oneside	chr15	24201892	24203093	-	noncoding	PWRN1	lncRNA	ANTISENSE	ENSG00000259905	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q11.2k	HERV	ERVLB4	oneside	chr15	24211553	24214111	-	noncoding	PWRN1,AC087463.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000259905,ENSG00000260780	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_15q11.2b	HERV	PRIMA41	internal	chr15	24238628	24239779	-	noncoding	PWRN1,AC087463.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000259905,ENSG00000260959	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLB_15q11.2b	HERV	PABLB	internal	chr15	24240441	24244040	-	noncoding	PWRN1	lncRNA	ANTISENSE	ENSG00000259905	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_15q11.2a	HERV	MER101	internal	chr15	24293322	24295254	-	noncoding	PWRN1	lncRNA	ANTISENSE	ENSG00000259905	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q11.2l	HERV	ERVLB4	oneside	chr15	24301728	24303199	-	noncoding	PWRN1	lncRNA	ANTISENSE	ENSG00000259905	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q11.2m	HERV	ERVLB4	oneside	chr15	24311308	24316410	-	noncoding	PWRN1	lncRNA	ANTISENSE	ENSG00000259905	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_15q11.2b	HERV	MER101	internal	chr15	24354673	24356853	-	noncoding	PWRN1	lncRNA	ANTISENSE	ENSG00000259905	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q11.2n	HERV	ERVLB4	internal	chr15	24356858	24359086	-	noncoding	PWRN1	lncRNA	ANTISENSE	ENSG00000259905	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PABLB_15q11.2c	HERV	PABLB	internal	chr15	24380987	24384478	-	noncoding	PWRN1	lncRNA	ANTISENSE	ENSG00000259905	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_15q11.2c	HERV	MER101	internal	chr15	24408914	24411086	-	noncoding	PWRN1	lncRNA	ANTISENSE	ENSG00000259905	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q11.2o	HERV	ERVLB4	internal	chr15	24411091	24413327	-	noncoding	PWRN1	lncRNA	ANTISENSE	ENSG00000259905	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_15q11.2d	HERV	MER101	internal	chr15	24463741	24464657	-	noncoding	PWRN1	lncRNA	ANTISENSE	ENSG00000259905	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q11.2p	HERV	ERVLB4	internal	chr15	24464662	24466901	-	noncoding	PWRN1	lncRNA	ANTISENSE	ENSG00000259905	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER101_15q11.2e	HERV	MER101	internal	chr15	24501091	24503083	-	noncoding	PWRN1	lncRNA	ANTISENSE	ENSG00000259905	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q11.2q	HERV	ERVLB4	oneside	chr15	24509438	24510910	-	noncoding	PWRN1	lncRNA	ANTISENSE	ENSG00000259905	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q11.2r	HERV	ERVLB4	oneside	chr15	24518365	24523479	-	noncoding	PWRN1	lncRNA	ANTISENSE	ENSG00000259905	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_15q11.2c	HERV	PRIMA41	internal	chr15	24551762	24552613	-	noncoding	PWRN1	lncRNA	ANTISENSE	ENSG00000259905	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLB_15q11.2d	HERV	PABLB	internal	chr15	24553518	24556590	-	noncoding	PWRN1	lncRNA	ANTISENSE	ENSG00000259905	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_15q11.2b	HERV	MER41	internal	chr15	24591098	24593048	-	noncoding	PWRN1,AC090983.2	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000259905,ENSG00000286110	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q11.2s	HERV	ERVLB4	oneside	chr15	24595849	24598467	-	noncoding	PWRN1,AC090983.2	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000259905,ENSG00000286110	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q11.2t	HERV	ERVLB4	internal	chr15	24630985	24633910	-	noncoding	PWRN1,AC090983.2	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000259905,ENSG00000286110	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_15q11.2	HERV	HERVH	prototype	chr15	24685360	24691027	-	noncoding	PWRN1,AC090983.2	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000259905,ENSG00000286110	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_15q11.2e	HERV	HERVL74	internal	chr15	24730447	24731921	+	noncoding	PWRN1,AC090983.2	lncRNA,lncRNA	SENSE,SENSE	ENSG00000259905,ENSG00000286110	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_15q11.2	HERV	MER34B	internal	chr15	24893923	24894835	-	noncoding	AC090983.2,SNRPN	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000286110,ENSG00000128739	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q11.2	HERV	ERVLE	internal	chr15	24899989	24901417	+	noncoding	AC090983.2,SNRPN	lncRNA,protein_coding	SENSE,SENSE	ENSG00000286110,ENSG00000128739	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q11.2u	HERV	ERVLB4	prototype	chr15	24940805	24945110	-	noncoding	SNRPN	protein_coding	ANTISENSE	ENSG00000128739	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q11.2v	HERV	ERVLB4	internal	chr15	25450818	25451562	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBE3A	ENSG00000114062	11767	LINC02250	ENSG00000235731	4709	None	None
ERVLB4_15q12	HERV	ERVLB4	oneside	chr15	25572234	25574436	-	noncoding	LINC02250	lncRNA	SENSE	ENSG00000235731	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_15q12	HERV	HML3	oneside	chr15	25636096	25640795	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC023449.1	ENSG00000223628	54974	ATP10A	ENSG00000206190	36476	None	chr15:25636430-25636458
MER101_15q12	HERV	MER101	internal	chr15	25756672	25757581	+	noncoding	ATP10A	protein_coding	ANTISENSE	ENSG00000206190	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q12a	HERV	ERVLE	internal	chr15	26076994	26079814	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02346	ENSG00000206187	23871	LINC00929	ENSG00000259150	35912	None	None
HERVL40_15q12	HERV	HERVL40	internal	chr15	26138557	26139654	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00929	ENSG00000259150	4556	AC012060.1	ENSG00000286884	122015	None	None
HERVL_15q12	HERV	HERVL	internal	chr15	26402079	26403119	+	noncoding	LINC02248	lncRNA	SENSE	ENSG00000235160	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_15q12	HERV	HERVIP10F	oneside	chr15	27264196	27265475	+	noncoding	GABRG3	protein_coding	SENSE	ENSG00000182256	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q12b	HERV	ERVLE	internal	chr15	27750698	27752090	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021979.2	ENSG00000258853	64930	OCA2	ENSG00000104044	2785	None	None
ERVLE_15q13.1a	HERV	ERVLE	internal	chr15	27899605	27900948	+	noncoding	OCA2	protein_coding	ANTISENSE	ENSG00000104044	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q13.1b	HERV	ERVLE	internal	chr15	28869041	28870697	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC174469.1	ENSG00000287894	10970	PDCD6IPP2	ENSG00000261377	10034	None	None
ERV316A3_15q13.1	HERV	ERV316A3	oneside	chr15	28871926	28873883	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC174469.1	ENSG00000287894	7784	PDCD6IPP2	ENSG00000261377	12919	None	None
ERVLB4_15q13.2a	HERV	ERVLB4	internal	chr15	30309499	30313653	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC135731.2	ENSG00000270955	21110	AC019322.6	ENSG00000279417	30654	None	None
ERVLE_15q13.2	HERV	ERVLE	internal	chr15	30319392	30322684	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC019322.6	ENSG00000279417	21623	AC135731.2	ENSG00000270955	31003	None	None
ERVL_15q13.2	HERV	ERVL	oneside	chr15	30498467	30499838	+	noncoding	AC127502.1	transcribed_unprocessed_pseudogene	SENSE	ENSG00000215302	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_15q13.2a	HERV	HERVL74	internal	chr15	30854792	30855541	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HERC2P10	ENSG00000259845	10639	AC087481.1	ENSG00000260382	26726	None	None
HERVL74_15q13.2b	HERV	HERVL74	internal	chr15	30855947	30860654	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HERC2P10	ENSG00000259845	11794	AC087481.1	ENSG00000260382	21613	None	None
ERVLB4_15q13.2b	HERV	ERVLB4	oneside	chr15	30864706	30867381	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087481.1	ENSG00000260382	14886	HERC2P10	ENSG00000259845	20553	None	None
ERVLB4_15q13.2c	HERV	ERVLB4	oneside	chr15	30867400	30872949	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HERC2P10	ENSG00000259845	23247	AC087481.1	ENSG00000260382	9318	None	None
LTR23_15q13.3a	HERV	LTR23	internal	chr15	31138733	31140031	+	noncoding	TRPM1	protein_coding	ANTISENSE	ENSG00000134160	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR23_15q13.3b	HERV	LTR23	internal	chr15	31141132	31141804	+	noncoding	TRPM1	protein_coding	ANTISENSE	ENSG00000134160	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15q13.3a	HERV	ERV316A3	internal	chr15	31241107	31242587	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KLF13	ENSG00000169926	84248	AC012236.1	ENSG00000259772	10269	None	None
ERV316A3_15q13.3b	HERV	ERV316A3	internal	chr15	31276139	31278355	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KLF13	ENSG00000169926	48480	AC012236.1	ENSG00000259772	45301	None	None
ERVLB4_15q13.3a	HERV	ERVLB4	prototype	chr15	31448070	31450841	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104759.1	ENSG00000259696	2360	KLF13	ENSG00000169926	12405	chr15:31447756-31448247	None
ERVLE_15q13.3a	HERV	ERVLE	internal	chr15	31467539	31472856	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104759.1	ENSG00000259696	13400	OTUD7A	ENSG00000169918	2542	None	None
HERVIP10FH_15q13.3	HERV	HERVIP10FH	prototype	chr15	31504974	31512979	-	noncoding	OTUD7A	protein_coding	SENSE	ENSG00000169918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr15:31507444-31507871	None
ERVLE_15q13.3b	HERV	ERVLE	internal	chr15	31584143	31585192	+	noncoding	OTUD7A	protein_coding	ANTISENSE	ENSG00000169918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_15q13.3	HERV	ERVL	internal	chr15	31934702	31937815	+	noncoding	CHRNA7	protein_coding	SENSE	ENSG00000175344	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q13.3c	HERV	ERVLE	internal	chr15	32208103	32211163	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068448.2	ENSG00000279912	21628	AC139426.3	ENSG00000271078	39139	None	None
ERVLB4_15q13.3b	HERV	ERVLB4	oneside	chr15	32223303	32229185	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC139426.3	ENSG00000271078	21117	AC068448.2	ENSG00000279912	36828	None	None
ERVLB4_15q13.3c	HERV	ERVLB4	oneside	chr15	32506258	32509243	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC135983.3	ENSG00000223509	10605	AC135983.4	ENSG00000254912	5912	None	None
MER41_15q13.3	HERV	MER41	internal	chr15	33043600	33049583	+	noncoding	FMN1	protein_coding	ANTISENSE	ENSG00000248905	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr15:33048628-33048632
MER4_15q14	HERV	MER4	prototype	chr15	33592784	33599722	-	noncoding	RYR3	protein_coding	ANTISENSE	ENSG00000198838	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_15q14	HERV	HERVIP10F	prototype	chr15	34154726	34161977	-	coding	KATNBL1	protein_coding	SENSE	ENSG00000134152	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr15:34154822-34154837,chr15:34161562-34161568
MER41_15q14	HERV	MER41	prototype	chr15	34377057	34378830	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ACTG1P15	ENSG00000259904	2454	GOLGA8A	ENSG00000175265	238	None	None
HERVH_15q14a	HERV	HERVH	prototype	chr15	35238629	35243837	+	noncoding	DPH6	protein_coding	ANTISENSE	ENSG00000134146	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_15q14	HERV	HUERSP3B	internal	chr15	35435748	35438253	+	noncoding	DPH6	protein_coding	ANTISENSE	ENSG00000134146	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_15q14	HERV	MER61	oneside	chr15	35438364	35440768	+	noncoding	DPH6	protein_coding	ANTISENSE	ENSG00000134146	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr15:35439606-35439611
ERV316A3_15q14a	HERV	ERV316A3	prototype	chr15	35549680	35551193	-	noncoding	DPH6-DT	lncRNA	ANTISENSE	ENSG00000248079	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q14a	HERV	ERVLE	internal	chr15	36064698	36065653	-	noncoding	AC021351.1	lncRNA	SENSE	ENSG00000259639	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q14b	HERV	ERVLE	internal	chr15	36239729	36244980	+	noncoding	AC021351.1	lncRNA	ANTISENSE	ENSG00000259639	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_15q14b	HERV	HERVH	oneside	chr15	36285828	36290875	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087516.1	ENSG00000259395	50864	AC021351.1	ENSG00000259639	33571	None	None
ERV316A3_15q14b	HERV	ERV316A3	prototype	chr15	37149557	37155905	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC078909.2	ENSG00000274444	39573	AC087283.2	ENSG00000274216	60712	None	None
HERVH_15q14c	HERV	HERVH	prototype	chr15	37236265	37241355	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087283.1	ENSG00000270304	12524	AC087283.2	ENSG00000274216	19367	None	None
ERVLE_15q14c	HERV	ERVLE	internal	chr15	37687953	37690120	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016304.1	ENSG00000243122	196850	TMCO5A	ENSG00000166069	231819	None	None
ERVLB4_15q14	HERV	ERVLB4	oneside	chr15	38641659	38643425	-	noncoding	LINC02694	lncRNA	ANTISENSE	ENSG00000175779	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q14d	HERV	ERVLE	internal	chr15	38789123	38790915	+	noncoding	LINC02694	lncRNA	SENSE	ENSG00000175779	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML5_15q14	HERV	HML5	oneside	chr15	39012800	39017150	+	noncoding	LINC02694,AC013652.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000175779,ENSG00000259345	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr15:39016832-39017026	None
ERV316A3_15q14c	HERV	ERV316A3	oneside	chr15	39129156	39131086	+	noncoding	LINC02694,AC013652.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000175779,ENSG00000259345	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr15:39130859-39130865
ERV316A3_15q14d	HERV	ERV316A3	oneside	chr15	39548084	39550354	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022196.1	ENSG00000259390	28130	THBS1	ENSG00000137801	30725	None	None
ERVLE_15q14e	HERV	ERVLE	internal	chr15	39634801	39637230	-	noncoding	FSIP1	protein_coding	SENSE	ENSG00000150667	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15q15.1a	HERV	ERV316A3	prototype	chr15	40314799	40320531	-	noncoding	AC020658.2	lncRNA	ANTISENSE	ENSG00000259198	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVK11_15q15.1	HERV	HERVK11	oneside	chr15	40686078	40690090	-	noncoding	RAD51-AS1	lncRNA	SENSE	ENSG00000245849	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_15q15.1a	HERV	HERVH	oneside	chr15	41131296	41135133	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	INO80	ENSG00000128908	15016	AC021753.1	ENSG00000283133	22042	None	None
HERVH_15q15.1b	HERV	HERVH	oneside	chr15	41135450	41137621	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	INO80	ENSG00000128908	19170	AC021753.1	ENSG00000283133	19554	None	None
HERVIP10F_15q15.1	HERV	HERVIP10F	oneside	chr15	41587503	41593097	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TYRO3	ENSG00000092445	3914	AC016134.1	ENSG00000260926	16360	None	None
ERV316A3_15q15.1b	HERV	ERV316A3	oneside	chr15	42119485	42121564	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PLA2G4F	ENSG00000168907	17470	PLA2G4D	ENSG00000159337	24923	None	None
ERVLE_15q15.1	HERV	ERVLE	internal	chr15	42289605	42292266	+	noncoding	GANC	protein_coding	SENSE	ENSG00000214013	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_15q15.2	HERV	HERVH	prototype	chr15	42884759	42890348	+	noncoding	TTBK2	protein_coding	ANTISENSE	ENSG00000128881	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15q15.2	HERV	ERV316A3	internal	chr15	42935782	42937078	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTBK2	ENSG00000128881	14973	FDPSP4	ENSG00000254793	2232	None	None
MER101_15q15.2	HERV	MER101	internal	chr15	43170341	43171051	-	noncoding	AC068724.4,TMEM62	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000285080,ENSG00000137842	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_15q21.1a	HERV	HERV9	oneside	chr15	44861990	44865787	-	noncoding	SORD2P	transcribed_unprocessed_pseudogene	SENSE	ENSG00000259479	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_15q21.1b	HERV	HERV9	oneside	chr15	44872302	44876375	-	noncoding	SORD2P	transcribed_unprocessed_pseudogene	SENSE	ENSG00000259479	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_15q21.1a	HERV	HUERSP1	prototype	chr15	44876665	44883399	-	noncoding	SORD2P	transcribed_unprocessed_pseudogene	SENSE	ENSG00000259479	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr15:44882569-44882595,chr15:44882596-44882613
ERVLB4_15q21.1a	HERV	ERVLB4	internal	chr15	44931679	44934370	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090888.3	ENSG00000259742	1057	TERB2	ENSG00000167014	22317	None	None
ERVLB4_15q21.1b	HERV	ERVLB4	internal	chr15	44948064	44949935	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TERB2	ENSG00000167014	6752	AC090888.3	ENSG00000259742	17442	None	None
HUERSP1_15q21.1b	HERV	HUERSP1	prototype	chr15	45004262	45010004	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-78P	ENSG00000212550	1234	SORD	ENSG00000140263	13177	None	chr15:45005032-45005043,chr15:45005079-45005090
HERV9_15q21.1c	HERV	HERV9	oneside	chr15	45010300	45014710	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-78P	ENSG00000212550	7272	SORD	ENSG00000140263	8471	None	None
LTR25_15q21.1a	HERV	LTR25	internal	chr15	45049247	45052678	-	noncoding	SORD,AC091117.3	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000140263,ENSG00000259418	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr15:45049302-45049543	chr15:45052677-45052681
MER34B_15q21.1	HERV	MER34B	internal	chr15	45057154	45057488	+	noncoding	SORD,AC091117.3	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000140263,ENSG00000259418	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_15q21.1b	HERV	LTR25	internal	chr15	45057842	45058561	-	noncoding	SORD,AC091117.3	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000140263,ENSG00000259418	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q21.1a	HERV	ERVLE	internal	chr15	45221155	45222662	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC051619.4	ENSG00000259520	13268	H3P39	ENSG00000259338	5212	None	None
HERVK14C_15q21.1	HERV	HERVK14C	prototype	chr15	45234478	45243073	-	coding	AC051619.4	lncRNA	SENSE	ENSG00000259520	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVL_15q21.1	HERV	ERVL	internal	chr15	45285671	45287857	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC051619.10	ENSG00000285597	5197	AC051619.1	ENSG00000235390	33220	None	None
ERV316A3_15q21.1a	HERV	ERV316A3	internal	chr15	45565763	45569117	+	noncoding	HMGN2P46,DPPA5P2	transcribed_processed_pseudogene,transcribed_processed_pseudogene	SENSE,SENSE	ENSG00000179362,ENSG00000259427	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15q21.1m	HERV	ERV316A3	opposite*	chr15	45620146	45622408	+	noncoding	AC090527.3	protein_coding	SENSE	ENSG00000260170	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr15:45622229-45622436	None
ERV316A3_15q21.1b	HERV	ERV316A3	internal	chr15	45707571	45708988	+	noncoding	AC068722.1	lncRNA	SENSE	ENSG00000259200	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15q21.1c	HERV	ERV316A3	oneside	chr15	45764435	45766045	-	noncoding	AC068722.1	lncRNA	ANTISENSE	ENSG00000259200	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15q21.1d	HERV	ERV316A3	internal	chr15	45766131	45770240	-	noncoding	AC068722.1	lncRNA	ANTISENSE	ENSG00000259200	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15q21.1e	HERV	ERV316A3	prototype	chr15	45865975	45869730	+	noncoding	AC068722.1	lncRNA	SENSE	ENSG00000259200	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q21.1b	HERV	ERVLE	internal	chr15	45881780	45882796	-	noncoding	AC068722.1	lncRNA	ANTISENSE	ENSG00000259200	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15q21.1f	HERV	ERV316A3	internal	chr15	45973789	45975068	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068722.1	ENSG00000259200	42720	AC068714.1	ENSG00000259743	124125	None	None
ERV316A3_15q21.1g	HERV	ERV316A3	oneside	chr15	46034226	46037689	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068714.1	ENSG00000259743	61504	AC068722.1	ENSG00000259200	103157	None	None
ERV316A3_15q21.1h	HERV	ERV316A3	oneside	chr15	46037731	46041139	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068714.1	ENSG00000259743	58054	AC068722.1	ENSG00000259200	106662	None	chr15:46040202-46040205
PRIMAX_15q21.1	HERV	PRIMAX	internal	chr15	46071005	46071705	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068714.1	ENSG00000259743	27488	AC068722.1	ENSG00000259200	139936	None	None
ERV316A3_15q21.1i	HERV	ERV316A3	oneside	chr15	46092844	46095086	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068714.1	ENSG00000259743	4107	AC068722.1	ENSG00000259200	161775	None	None
ERV316A3_15q21.1j	HERV	ERV316A3	internal	chr15	46138050	46139568	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091074.3	ENSG00000287020	177825	AC068714.1	ENSG00000259743	37658	None	None
LTR25_15q21.1c	HERV	LTR25	internal	chr15	46143441	46145785	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068714.1	ENSG00000259743	43049	AC091074.3	ENSG00000287020	171608	None	None
ERVLE_15q21.1c	HERV	ERVLE	internal	chr15	46231445	46235495	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091074.3	ENSG00000287020	81898	AC068714.1	ENSG00000259743	131053	None	None
ERVLE_15q21.1d	HERV	ERVLE	oneside	chr15	46325487	46326774	-	noncoding	AC091074.3	lncRNA	ANTISENSE	ENSG00000287020	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q21.1c	HERV	ERVLB4	internal	chr15	46381337	46383617	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012405.1	ENSG00000287704	26692	AC091074.2	ENSG00000285934	294	None	None
ERV316A3_15q21.1k	HERV	ERV316A3	oneside	chr15	46526325	46529175	-	noncoding	AC012405.1	lncRNA	ANTISENSE	ENSG00000287704	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15q21.1l	HERV	ERV316A3	internal	chr15	46618985	46619931	+	noncoding	AC012405.1	lncRNA	SENSE	ENSG00000287704	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_15q21.1a	HERV	MER4B	oneside	chr15	46765805	46771662	-	noncoding	AC073941.1	lncRNA	ANTISENSE	ENSG00000259255	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr15:46766847-46766852
LTR57_15q21.1	HERV	LTR57	internal	chr15	46771663	46772189	-	noncoding	AC073941.1	lncRNA	ANTISENSE	ENSG00000259255	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_15q21.1b	HERV	MER4B	oneside	chr15	46772190	46774406	-	noncoding	AC073941.1	lncRNA	ANTISENSE	ENSG00000259255	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q21.1e	HERV	ERVLE	internal	chr15	46813219	46815177	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073941.2	ENSG00000259509	12349	AC073941.1	ENSG00000259255	8375	None	chr15:46814263-46814264
ERVLE_15q21.1f	HERV	ERVLE	internal	chr15	46941690	46942249	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073941.2	ENSG00000259509	113732	AC066615.1	ENSG00000284540	191246	None	None
HERVL_15q21.1	HERV	HERVL	oneside	chr15	46986008	46989099	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073941.2	ENSG00000259509	158050	AC066615.1	ENSG00000284540	144396	None	None
ERVLE_15q21.1g	HERV	ERVLE	internal	chr15	47057189	47058572	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC066615.1	ENSG00000284540	74923	AC073941.2	ENSG00000259509	229231	None	None
MER4B_15q21.1c	HERV	MER4B	internal	chr15	47334698	47336559	+	noncoding	SEMA6D	protein_coding	SENSE	ENSG00000137872	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_15q21.1	HERV	HERVL18	oneside	chr15	48050587	48051547	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC24A5	ENSG00000188467	69443	AC092078.2	ENSG00000259754	80	None	None
ERV316A3_15q21.2a	HERV	ERV316A3	prototype	chr15	49650523	49652924	+	noncoding	DTWD1	protein_coding	SENSE	ENSG00000104047	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVH_15q21.2	HERV	HERVH	prototype	chr15	49698524	49704756	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025040.2	ENSG00000259388	89490	DTWD1	ENSG00000104047	42292	None	None
HML5_15q21.2	HERV	HML5	oneside	chr15	49839371	49844779	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025040.2	ENSG00000259388	43274	ATP8B4	ENSG00000104043	13459	None	None
MER101_15q21.2a	HERV	MER101	oneside	chr15	50149654	50151548	-	noncoding	ATP8B4	protein_coding	SENSE	ENSG00000104043	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_15q21.2b	HERV	MER101	internal	chr15	50151774	50154622	-	coding	ATP8B4	protein_coding	SENSE	ENSG00000104043	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_15q21.2a	HERV	MER41	oneside	chr15	50667719	50670796	+	coding	TRPM7	protein_coding	ANTISENSE	ENSG00000092439	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_15q21.2	HERV	MER4B	oneside	chr15	50870443	50875773	-	noncoding	AC021752.1	lncRNA	SENSE	ENSG00000273674	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML1_15q21.2	HERV	HML1	prototype	chr15	51282244	51285924	+	noncoding	MIR4713HG,CYP19A1	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000259240,ENSG00000137869	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr15:51282239-51282558	None
HERVW_15q21.2	HERV	HERVW	internal	chr15	51357366	51360808	+	noncoding	GLDN	protein_coding	SENSE	ENSG00000186417	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr15:51360221-51360224,chr15:51360232-51360246
MER4_15q21.2a	HERV	MER4	oneside	chr15	51416001	51417137	-	noncoding	AC066613.2	lncRNA	ANTISENSE	ENSG00000259678	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_15q21.2b	HERV	MER4	internal	chr15	51423247	51425731	-	noncoding	AC066613.2	lncRNA	ANTISENSE	ENSG00000259678	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_15q21.2c	HERV	MER4	oneside	chr15	51425967	51428632	-	noncoding	AC066613.2	lncRNA	ANTISENSE	ENSG00000259678	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr15:51426747-51426748
MER41_15q21.2b	HERV	MER41	prototype	chr15	51634545	51637646	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SCG3	ENSG00000104112	43846	DMXL2	ENSG00000104093	11712	chr15:51634609-51634948	None
ERVLB4_15q21.2	HERV	ERVLB4	internal	chr15	51933185	51935644	-	noncoding	TMOD3	protein_coding	ANTISENSE	ENSG00000138594	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15q21.2b	HERV	ERV316A3	oneside	chr15	51995047	51996386	-	noncoding	MAPK6	protein_coding	ANTISENSE	ENSG00000069956	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q21.2	HERV	ERVLE	internal	chr15	52113318	52114980	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BCL2L10	ENSG00000137875	543	GNB5	ENSG00000069966	125	None	None
HERVH_15q21.3a	HERV	HERVH	prototype	chr15	52738558	52745204	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM214A	ENSG00000047346	28741	ONECUT1	ENSG00000169856	9849	chr15:52742326-52742585	None
ERVLE_15q21.3a	HERV	ERVLE	internal	chr15	53367056	53367823	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC066614.1	ENSG00000287596	52042	LINC02490	ENSG00000259237	237358	None	None
ERVLE_15q21.3b	HERV	ERVLE	oneside	chr15	53406381	53407798	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02490	ENSG00000259237	276683	AC066614.1	ENSG00000287596	12067	None	None
HERVH_15q21.3b	HERV	HERVH	prototype	chr15	53426844	53432463	-	noncoding	AC066614.1	lncRNA	ANTISENSE	ENSG00000287596	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_15q21.3	HERV	MER4	oneside	chr15	53822858	53826115	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084759.1	ENSG00000259301	11156	RNU6-449P	ENSG00000206641	58548	None	None
HERVL18_15q21.3	HERV	HERVL18	prototype	chr15	53910296	53914772	+	noncoding	AC084759.3	TEC	SENSE	ENSG00000280362	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr15:53911053-53911293	None
ERV316A3_15q21.3a	HERV	ERV316A3	oneside	chr15	53990838	53993502	-	noncoding	UNC13C	protein_coding	ANTISENSE	ENSG00000137766	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15q21.3b	HERV	ERV316A3	oneside	chr15	54774650	54776237	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UNC13C	ENSG00000137766	141236	AC025272.1	ENSG00000260937	280486	None	None
HML5_15q21.3	HERV	HML5	prototype	chr15	54886807	54891573	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UNC13C	ENSG00000137766	253393	AC025272.1	ENSG00000260937	165150	None	None
HERVW_15q21.3	HERV	HERVW	prototype	chr15	55304882	55312376	-	noncoding	RAB27A	protein_coding	SENSE	ENSG00000069974	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV4_15q21.3	HERV	HERV4	oneside	chr15	55477977	55482210	+	noncoding	DNAAF4-CCPG1,DNAAF4	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000261771,ENSG00000256061	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVEA_15q21.3	HERV	HERVEA	prototype	chr15	55510695	55516311	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PYGO1	ENSG00000171016	22579	DNAAF4	ENSG00000256061	2461	None	chr15:55513995-55514016,chr15:55514626-55514642,chr15:55514649-55514656
ERV316A3_15q21.3c	HERV	ERV316A3	oneside	chr15	56291715	56293042	+	noncoding	TEX9	protein_coding	SENSE	ENSG00000151575	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15q21.3d	HERV	ERV316A3	oneside	chr15	56336612	56338505	-	noncoding	TEX9	protein_coding	ANTISENSE	ENSG00000151575	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q21.3	HERV	ERVLB4	internal	chr15	56338572	56341097	-	noncoding	TEX9	protein_coding	ANTISENSE	ENSG00000151575	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_15q21.3	HERV	HERVL40	unknown	chr15	57013977	57017165	+	noncoding	TCF12	protein_coding	SENSE	ENSG00000140262	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_15q21.3	HERV	HERVL	oneside	chr15	58207347	58210949	+	coding	ALDH1A2	protein_coding	ANTISENSE	ENSG00000128918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q22.2a	HERV	ERVLE	internal	chr15	59505859	59506861	-	noncoding	FAM81A	protein_coding	ANTISENSE	ENSG00000157470	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q22.2b	HERV	ERVLE	oneside	chr15	61366631	61370377	+	noncoding	AC104574.2	lncRNA	ANTISENSE	ENSG00000259616	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q22.2c	HERV	ERVLE	internal	chr15	61788526	61789522	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02349	ENSG00000259284	57137	AC009554.1	ENSG00000259564	45160	None	None
ERVLE_15q22.2d	HERV	ERVLE	internal	chr15	62131587	62132199	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPM1P47	ENSG00000259466	48282	C2CD4B	ENSG00000205502	31336	None	None
MER4B_15q22.2a	HERV	MER4B	internal	chr15	62207174	62211910	+	noncoding	AC126323.2	lncRNA	ANTISENSE	ENSG00000259697	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr15:62207753-62208034	chr15:62208028-62208034
HML1_15q22.2	HERV	HML1	prototype	chr15	62211914	62217124	-	coding	AC126323.2	lncRNA	SENSE	ENSG00000259697	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_15q22.2b	HERV	MER4B	internal	chr15	62217169	62218454	+	noncoding	AC126323.2	lncRNA	ANTISENSE	ENSG00000259697	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_15q22.31a	HERV	MER41	prototype	chr15	65347988	65353892	+	coding	IGDCC3	protein_coding	ANTISENSE	ENSG00000174498	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_15q22.31b	HERV	MER41	internal	chr15	66464103	66466989	-	noncoding	MAP2K1	protein_coding	ANTISENSE	ENSG00000169032	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_15q22.31a	HERV	MER4	internal	chr15	66467490	66468975	-	noncoding	MAP2K1	protein_coding	ANTISENSE	ENSG00000169032	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_15q22.31b	HERV	MER4	oneside	chr15	66469265	66471200	-	noncoding	MAP2K1	protein_coding	ANTISENSE	ENSG00000169032	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr15:66469497-66469505
HERVL40_15q22.31	HERV	HERVL40	oneside	chr15	66790919	66795741	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SMAD6	ENSG00000137834	8070	AC110048.1	ENSG00000270490	12663	None	None
HUERSP1_15q22.31	HERV	HUERSP1	prototype	chr15	66887808	66895981	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093334.1	ENSG00000259437	23830	AC110048.2	ENSG00000277152	20785	None	None
HERVW_15q22.32	HERV	HERVW	prototype	chr15	66969224	66976624	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087482.1	ENSG00000259347	7479	LINC02206	ENSG00000259289	12706	None	chr15:66969224-66969226
ERVLE_15q22.32	HERV	ERVLE	internal	chr15	66976781	66977916	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02206	ENSG00000259289	20263	AC087482.1	ENSG00000259347	6187	None	None
ERV316A3_15q23	HERV	ERV316A3	oneside	chr15	67932524	67936765	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009292.2	ENSG00000259410	58658	AC022254.1	ENSG00000261702	37626	None	None
HUERSP1_15q23a	HERV	HUERSP1	internal	chr15	68242569	68244135	+	noncoding	CLN6	protein_coding	ANTISENSE	ENSG00000128973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q23a	HERV	ERVLE	internal	chr15	68867047	68868304	-	noncoding	SPESP1	protein_coding	ANTISENSE	ENSG00000258484	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q23b	HERV	ERVLE	internal	chr15	68879135	68880811	+	noncoding	SPESP1,AC087639.2	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000258484,ENSG00000285919	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q23c	HERV	ERVLE	internal	chr15	68927117	68927942	+	noncoding	SPESP1,AC087639.2	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000258484,ENSG00000285919	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q23d	HERV	ERVLE	internal	chr15	68972216	68973403	-	noncoding	AC027088.1,NOX5	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000137808,ENSG00000255346	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q23e	HERV	ERVLE	internal	chr15	68978657	68980165	-	noncoding	AC027088.1,NOX5	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000137808,ENSG00000255346	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q23f	HERV	ERVLE	internal	chr15	68980637	68982482	-	noncoding	AC027088.1,NOX5	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000137808,ENSG00000255346	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_15q23	HERV	HERV3	oneside	chr15	68991613	68995365	-	noncoding	AC027088.1,NOX5,AC027088.5	lncRNA,protein_coding,lncRNA	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000137808,ENSG00000255346,ENSG00000288068	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_15q23b	HERV	HUERSP1	prototype	chr15	69330196	69339368	+	noncoding	PAQR5	protein_coding	SENSE	ENSG00000137819	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q23a	HERV	ERVLB4	oneside	chr15	69349149	69355184	+	noncoding	PAQR5	protein_coding	SENSE	ENSG00000137819	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_15q23	HERV	HERVL40	oneside	chr15	69698413	69700596	+	noncoding	DRAIC	lncRNA	SENSE	ENSG00000245750	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q23b	HERV	ERVLB4	internal	chr15	70270839	70271841	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026583.1	ENSG00000259252	72330	AC048383.1	ENSG00000259503	49735	None	None
ERVLE_15q23g	HERV	ERVLE	internal	chr15	70601492	70603765	+	noncoding	AC087699.1	processed_pseudogene	SENSE	ENSG00000259227	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q23h	HERV	ERVLE	internal	chr15	70639530	70642154	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SALRNA2	ENSG00000280515	2216	UACA	ENSG00000137831	12400	chr15:70642002-70642175	None
ERV316A3_15q24.1a	HERV	ERV316A3	internal	chr15	72618777	72620666	+	noncoding	LINC02259	lncRNA	ANTISENSE	ENSG00000259783	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q24.1	HERV	ERVLE	internal	chr15	73418691	73423333	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	REC114	ENSG00000183324	19831	HCN4	ENSG00000138622	49733	None	None
HUERSP1_15q24.1	HERV	HUERSP1	oneside	chr15	73576296	73577961	+	noncoding	NPTN	protein_coding	ANTISENSE	ENSG00000156642	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_15q24.1	HERV	HERVH	prototype	chr15	74354144	74359784	+	noncoding	CYP11A1,PPIAP46	protein_coding,transcribed_processed_pseudogene	ANTISENSE,SENSE	ENSG00000140459,ENSG00000260266	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_15q24.1	HERV	MER41	internal	chr15	74359786	74361387	+	noncoding	CYP11A1,PPIAP46	protein_coding,transcribed_processed_pseudogene	ANTISENSE,SENSE	ENSG00000140459,ENSG00000260266	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15q24.1b	HERV	ERV316A3	oneside	chr15	74493830	74502571	-	noncoding	UBL7-AS1,AC012435.3	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000247240,ENSG00000261775	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_15q24.2	HERV	HERVP71A	oneside	chr15	75063487	75067944	+	noncoding	PPCDC	protein_coding	SENSE	ENSG00000138621	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr15:75063825-75063830,chr15:75067353-75067376
MER41_15q24.2	HERV	MER41	internal	chr15	75146361	75150738	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113208.2	ENSG00000252722	24695	RPL36AP45	ENSG00000240366	35913	None	chr15:75150350-75150355
HUERSP1_15q24.2	HERV	HUERSP1	oneside	chr15	75168605	75170205	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113208.2	ENSG00000252722	46939	RPL36AP45	ENSG00000240366	16446	None	None
ERV316A3_15q24.2	HERV	ERV316A3	internal	chr15	75314899	75316770	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DNM1P34	ENSG00000260357	11934	ANP32BP1	ENSG00000259790	4627	None	None
HML1_15q24.2	HERV	HML1	prototype	chr15	76262993	76269680	+	noncoding	ETFA,AC027243.4	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000140374,ENSG00000287503	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15q24.3a	HERV	ERV316A3	oneside	chr15	76315039	76318446	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ISL2	ENSG00000159556	18327	ETFA	ENSG00000140374	3567	None	None
HERVK11D_15q24.3	HERV	HERVK11D	oneside	chr15	76639181	76641589	+	noncoding	SCAPER	protein_coding	ANTISENSE	ENSG00000140386	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q24.3a	HERV	ERVLE	internal	chr15	76911472	76915969	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SCAPER	ENSG00000140386	6028	RCN2	ENSG00000117906	15769	None	None
ERVLE_15q24.3b	HERV	ERVLE	internal	chr15	76917470	76918846	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RCN2	ENSG00000117906	12892	SCAPER	ENSG00000140386	12026	None	None
ERVLE_15q24.3c	HERV	ERVLE	internal	chr15	76920596	76921140	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RCN2	ENSG00000117906	10598	SCAPER	ENSG00000140386	15152	None	None
ERV316A3_15q24.3b	HERV	ERV316A3	internal	chr15	76921267	76922108	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RCN2	ENSG00000117906	9630	SCAPER	ENSG00000140386	15823	None	None
ERVLE_15q24.3d	HERV	ERVLE	internal	chr15	77089040	77091246	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PEAK1	ENSG00000173517	9410	TSPAN3	ENSG00000140391	5056	None	None
ERVLE_15q25.1a	HERV	ERVLE	internal	chr15	78906065	78907715	+	noncoding	AC011944.2	TEC	SENSE	ENSG00000279235	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q25.1b	HERV	ERVLE	internal	chr15	79128336	79130936	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RASGRF1	ENSG00000058335	37563	ANKRD34C-AS1	ENSG00000259234	11003	None	None
ERV316A3_15q25.1a	HERV	ERV316A3	oneside	chr15	79226963	79227795	+	noncoding	ANKRD34C-AS1	lncRNA	ANTISENSE	ENSG00000259234	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15q25.1b	HERV	ERV316A3	oneside	chr15	79402815	79407567	-	noncoding	TMED3	protein_coding	ANTISENSE	ENSG00000166557	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15q25.1c	HERV	ERV316A3	prototype	chr15	79540213	79543477	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MINAR1	ENSG00000169330	67909	AC023968.2	ENSG00000259493	15779	None	None
ERVLE_15q25.1c	HERV	ERVLE	internal	chr15	79609620	79611802	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023968.1	ENSG00000259208	56540	AC023968.2	ENSG00000259493	49316	None	None
ERVLE_15q25.1d	HERV	ERVLE	internal	chr15	79611845	79613151	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023968.2	ENSG00000259493	51541	AC023968.1	ENSG00000259208	55191	None	None
HERVL40_15q25.1	HERV	HERVL40	prototype	chr15	79627044	79631630	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023968.2	ENSG00000259493	66740	AC023968.1	ENSG00000259208	36712	None	None
HERVL_15q25.1a	HERV	HERVL	internal	chr15	79690965	79691987	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026826.3	ENSG00000260674	51324	AC023968.1	ENSG00000259208	22149	None	None
HERVL_15q25.1b	HERV	HERVL	oneside	chr15	79692069	79693776	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026826.3	ENSG00000260674	49535	AC023968.1	ENSG00000259208	23253	None	None
ERVLE_15q25.1e	HERV	ERVLE	oneside	chr15	79821616	79823244	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-667P	ENSG00000252995	4166	AC021483.1	ENSG00000259548	9222	None	None
HERVI_15q25.1	HERV	HERVI	oneside	chr15	79915868	79918144	-	noncoding	ST20-MTHFS,ST20	protein_coding,protein_coding	SENSE,SENSE	ENSG00000259332,ENSG00000180953	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_15q25.1	HERV	HERVIP10FH	oneside	chr15	79918724	79920814	-	coding	ST20-MTHFS,ST20,AC015871.3	protein_coding,protein_coding,lncRNA	SENSE,SENSE,SENSE	ENSG00000259332,ENSG00000180953,ENSG00000278600	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr15:79919591-79919890	None
ERVLE_15q25.1f	HERV	ERVLE	internal	chr15	80193697	80196498	+	noncoding	CTXND1	protein_coding	ANTISENSE	ENSG00000259417	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_15q25.1	HERV	HUERSP3B	oneside	chr15	80366025	80371154	+	noncoding	AC016705.2	lncRNA	ANTISENSE	ENSG00000259495	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15q25.1d	HERV	ERV316A3	internal	chr15	80655173	80656937	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-380P	ENSG00000222139	6835	ARNT2	ENSG00000172379	57240	None	None
MER101_15q25.1a	HERV	MER101	oneside	chr15	81114948	81117237	-	noncoding	CFAP161	protein_coding	ANTISENSE	ENSG00000156206	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_15q25.1b	HERV	MER101	internal	chr15	81118757	81120700	-	noncoding	CFAP161	protein_coding	ANTISENSE	ENSG00000156206	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_15q25.1c	HERV	MER101	internal	chr15	81120843	81121708	-	noncoding	CFAP161	protein_coding	ANTISENSE	ENSG00000156206	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15q25.2a	HERV	ERV316A3	internal	chr15	81572878	81574370	+	noncoding	AC060809.1,AC023034.1	lncRNA,lncRNA	SENSE,SENSE	ENSG00000259543,ENSG00000259594	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15q25.2b	HERV	ERV316A3	internal	chr15	82025012	82029004	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104041.1	ENSG00000259692	11433	MEX3B	ENSG00000183496	12774	None	chr15:82027053-82027060
HERVI_15q25.2	HERV	HERVI	prototype	chr15	82487063	82496058	+	noncoding	GOLGA2P10	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000255769	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_15q25.2	HERV	HERVH	prototype	chr15	82702377	82708400	+	noncoding	AP3B2	protein_coding	ANTISENSE	ENSG00000103723	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr15:82703210-82703546,chr15:82707928-82708304	None
ERVL_15q25.2	HERV	ERVL	internal	chr15	82872821	82873752	+	noncoding	HOMER2	protein_coding	ANTISENSE	ENSG00000103942	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q25.2	HERV	ERVLE	internal	chr15	83232675	83236232	+	noncoding	AC103876.1	lncRNA	SENSE	ENSG00000259986	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q25.2	HERV	ERVLB4	oneside	chr15	83337990	83340847	+	noncoding	AC103876.1	lncRNA	SENSE	ENSG00000259986	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_15q25.2	HERV	HML2	internal	chr15	84160268	84163612	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EFL1P1	ENSG00000259404	33664	DNM1P41	ENSG00000280038	2935	None	None
ERVLE_15q25.3a	HERV	ERVLE	oneside	chr15	84702938	84706940	+	noncoding	SEC11A	protein_coding	ANTISENSE	ENSG00000140612	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q25.3b	HERV	ERVLE	internal	chr15	84871194	84873485	-	noncoding	ALPK3	protein_coding	ANTISENSE	ENSG00000136383	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q25.3a	HERV	ERVLB4	internal	chr15	86826690	86830863	+	noncoding	AGBL1	protein_coding	SENSE	ENSG00000273540	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr15:86827957-86827960
ERVLB4_15q25.3b	HERV	ERVLB4	internal	chr15	86833211	86834366	+	noncoding	AGBL1	protein_coding	SENSE	ENSG00000273540	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_15q25.3a	HERV	HERVH	oneside	chr15	87041969	87045508	+	noncoding	AC078905.1	lncRNA	SENSE	ENSG00000259761	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q25.3c	HERV	ERVLE	internal	chr15	87303041	87304224	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC020687.1	ENSG00000259560	21605	AC078905.1	ENSG00000259761	255738	None	None
HUERSP1_15q25.3	HERV	HUERSP1	prototype	chr15	87663157	87669568	+	noncoding	AC020687.1,AC103871.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000259560,ENSG00000287391	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr15:87669425-87669429
HERVH_15q25.3b	HERV	HERVH	prototype	chr15	87831107	87837022	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC020687.1	ENSG00000259560	127255	NTRK3	ENSG00000140538	22729	None	None
ERVLE_15q25.3d	HERV	ERVLE	internal	chr15	88414731	88415563	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NTRK3-AS1	ENSG00000260305	143665	MRPL46	ENSG00000259494	43914	None	None
ERVLE_15q25.3e	HERV	ERVLE	internal	chr15	88419006	88425237	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NTRK3-AS1	ENSG00000260305	147940	MRPL46	ENSG00000259494	34240	None	None
HERVS71_15q26.1	HERV	HERVS71	prototype	chr15	88538134	88546230	+	noncoding	AC013489.1,DET1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000173867,ENSG00000140543	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_15q26.1a	HERV	HERVH	oneside	chr15	88547268	88551301	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC013489.2	ENSG00000259569	16986	DET1	ENSG00000140543	593	None	chr15:88547286-88547301
HERVH_15q26.1b	HERV	HERVH	oneside	chr15	88560270	88562263	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC013489.2	ENSG00000259569	6024	DET1	ENSG00000140543	13595	None	None
HUERSP1_15q26.1a	HERV	HUERSP1	prototype	chr15	88920334	88930129	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MFGE8	ENSG00000140545	6953	AC067805.1	ENSG00000259350	22554	None	None
MER4_15q26.1a	HERV	MER4	internal	chr15	88937583	88939430	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MFGE8	ENSG00000140545	24202	AC067805.1	ENSG00000259350	13253	None	None
MER4_15q26.1b	HERV	MER4	internal	chr15	88943320	88944922	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MFGE8	ENSG00000140545	29939	AC067805.1	ENSG00000259350	7761	None	None
HML3_15q26.1	HERV	HML3	prototype	chr15	89233714	89240303	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FANCI	ENSG00000140525	3646	RLBP1	ENSG00000140522	12100	None	None
HERV4_15q26.1	HERV	HERV4	prototype	chr15	89462545	89469801	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR9-3HG	ENSG00000255571	64058	RHCG	ENSG00000140519	1597	chr15:89469442-89469648	chr15:89462827-89462832
HERVH_15q26.1c	HERV	HERVH	prototype	chr15	90133293	90138300	+	noncoding	IDH2-DT	lncRNA	SENSE	ENSG00000259685	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q26.1a	HERV	ERVLB4	internal	chr15	91232546	91235088	+	noncoding	SV2B	protein_coding	SENSE	ENSG00000185518	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q26.1a	HERV	ERVLE	internal	chr15	91391425	91393208	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC123784.1	ENSG00000285883	85104	AC104035.1	ENSG00000258551	15500	None	None
ERVLE_15q26.1b	HERV	ERVLE	internal	chr15	91515675	91517679	-	noncoding	AC104035.1	lncRNA	ANTISENSE	ENSG00000258551	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q26.1b	HERV	ERVLB4	internal	chr15	91630261	91632467	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104035.1	ENSG00000258551	24388	AC107958.2	ENSG00000258765	10550	None	None
HERV9_15q26.1	HERV	HERV9	oneside	chr15	92210712	92214977	+	noncoding	AC116903.2	lncRNA	ANTISENSE	ENSG00000260661	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_15q26.1b	HERV	HUERSP1	oneside	chr15	92235575	92237509	+	noncoding	AC116903.2	lncRNA	ANTISENSE	ENSG00000260661	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q26.1c	HERV	ERVLE	internal	chr15	92276388	92279430	+	noncoding	AC116903.2	lncRNA	ANTISENSE	ENSG00000260661	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_15q26.1	HERV	HERVW	prototype	chr15	92298147	92302200	+	noncoding	AC116903.2	lncRNA	ANTISENSE	ENSG00000260661	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_15q26.1d	HERV	HERVH	prototype	chr15	92511307	92517425	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C15orf32	ENSG00000183643	10190	LINC00930	ENSG00000258647	50392	None	None
ERVL_15q26.1	HERV	ERVL	prototype	chr15	92552094	92553707	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C15orf32	ENSG00000183643	50977	LINC00930	ENSG00000258647	14110	None	None
HERVL74_15q26.1	HERV	HERVL74	internal	chr15	93093507	93097816	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108457.1	ENSG00000285663	79453	RGMA	ENSG00000182175	4303	None	None
ERV316A3_15q26.1	HERV	ERV316A3	internal	chr15	93637806	93638792	-	noncoding	AC110023.1	lncRNA	ANTISENSE	ENSG00000258631	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q26.2a	HERV	ERVLE	internal	chr15	93909984	93910802	+	noncoding	LINC01579,LINC01580,LINC01581	lncRNA,lncRNA,lncRNA	ANTISENSE,SENSE,ANTISENSE	ENSG00000258754,ENSG00000258785,ENSG00000259724	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_15q26.2a	HERV	HERVL	oneside	chr15	94492346	94493815	+	noncoding	AC009432.2	lncRNA	ANTISENSE	ENSG00000287950	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q26.2b	HERV	ERVLE	internal	chr15	94534830	94535552	-	noncoding	AC009432.2	lncRNA	SENSE	ENSG00000287950	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_15q26.2b	HERV	HERVH	tandem*	chr15	94750749	94760376	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022308.1	ENSG00000286917	24230	AC087633.2	ENSG00000277654	80683	None	chr15:94751135-94751149
MER61_15q26.2	HERV	MER61	internal	chr15	94876321	94880341	-	noncoding	AC087633.2	transcribed_processed_pseudogene	ANTISENSE	ENSG00000277654	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_15q26.2b	HERV	HERVL	oneside	chr15	95202489	95205704	+	noncoding	LINC01197	lncRNA	ANTISENSE	ENSG00000248441	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr15:95202920-95202925
HERVL74_15q26.2	HERV	HERVL74	oneside	chr15	95508532	95511113	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00924	ENSG00000259134	667	AC015574.1	ENSG00000275016	127203	None	None
ERV316A3_15q26.2a	HERV	ERV316A3	oneside	chr15	95728861	95729950	+	noncoding	AC015574.1	lncRNA	SENSE	ENSG00000275016	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15q26.2b	HERV	ERV316A3	oneside	chr15	95814469	95816820	-	noncoding	AC015574.1	lncRNA	ANTISENSE	ENSG00000275016	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q26.2c	HERV	ERVLE	internal	chr15	96826854	96830061	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP181	ENSG00000223120	12008	SPATA8	ENSG00000185594	41239	None	None
HERVH_15q26.2a	HERV	HERVH	prototype	chr15	96871837	96877667	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02253	ENSG00000259485	338145	RN7SKP181	ENSG00000223120	29453	None	None
ERVLE_15q26.2d	HERV	ERVLE	internal	chr15	96923730	96928563	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP181	ENSG00000223120	81346	LINC02253	ENSG00000259485	287249	None	None
ERVLB4_15q26.2a	HERV	ERVLB4	prototype	chr15	97026043	97030571	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02253	ENSG00000259485	185241	RN7SKP181	ENSG00000223120	183659	None	None
HUERSP1_15q26.2a	HERV	HUERSP1	oneside	chr15	97246910	97250192	-	noncoding	LINC02253	lncRNA	ANTISENSE	ENSG00000259485	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_15q26.2b	HERV	HUERSP1	internal	chr15	97250227	97251351	-	noncoding	LINC02253	lncRNA	ANTISENSE	ENSG00000259485	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q26.2e	HERV	ERVLE	internal	chr15	97326661	97328853	+	noncoding	LINC02253	lncRNA	SENSE	ENSG00000259485	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q26.2f	HERV	ERVLE	internal	chr15	97496530	97500957	-	noncoding	LINC02254	lncRNA	SENSE	ENSG00000259664	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15q26.2c	HERV	ERV316A3	oneside	chr15	97540490	97541950	-	noncoding	AC026523.2,AC026523.1	TEC,lncRNA	SENSE,SENSE	ENSG00000279091,ENSG00000259582	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15q26.2d	HERV	ERV316A3	internal	chr15	97546703	97548375	-	noncoding	AC026523.1	lncRNA	SENSE	ENSG00000259582	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q26.2b	HERV	ERVLB4	oneside	chr15	97854282	97856050	+	noncoding	LINC00923	lncRNA	ANTISENSE	ENSG00000251209	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15q26.3a	HERV	ERVLB4	internal	chr15	98045957	98046804	+	noncoding	LINC02251,AC022523.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000258483,ENSG00000259199	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q26.3a	HERV	ERVLE	internal	chr15	98370145	98372584	-	noncoding	LINC02351	lncRNA	SENSE	ENSG00000277987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q26.3b	HERV	ERVLE	internal	chr15	99383589	99384407	-	noncoding	LRRC28	protein_coding	ANTISENSE	ENSG00000168904	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15q26.3a	HERV	ERV316A3	oneside	chr15	99963111	99968055	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090825.1	ENSG00000259363	46293	AC084855.1	ENSG00000254744	2160	None	None
HERVL_15q26.3	HERV	HERVL	oneside	chr15	100079598	100081376	+	noncoding	ADAMTS17	protein_coding	ANTISENSE	ENSG00000140470	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_15q26.3a	HERV	HERVH	prototype	chr15	100440257	100446201	+	noncoding	CERS3	protein_coding	ANTISENSE	ENSG00000154227	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr15:100440502-100440503
ERVLB4_15q26.3b	HERV	ERVLB4	prototype	chr15	100806560	100814413	-	noncoding	AC087762.1	lncRNA	ANTISENSE	ENSG00000259579	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr15:100808293-100808295
HERVH_15q26.3b	HERV	HERVH	prototype	chr15	101072487	101078293	+	noncoding	LRRK1,AC090907.2	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000154237,ENSG00000259755	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q26.3c	HERV	ERVLE	internal	chr15	101660376	101661379	-	noncoding	TARS3	protein_coding	SENSE	ENSG00000185418	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15q26.3d	HERV	ERVLE	internal	chr15	101726192	101727819	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TARS3	ENSG00000185418	1719	AC027559.1	ENSG00000259658	4382	None	None
ERV316A3_15q26.3b	HERV	ERV316A3	internal	chr15	101821083	101824536	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4F15	ENSG00000182854	886	OR4F14P	ENSG00000232459	4205	None	None
LTR57_15q26.3	HERV	LTR57	internal	chr15	101854750	101856039	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4F13P	ENSG00000214344	4426	OR4F28P	ENSG00000257109	19925	None	None
MER101_15q26.3	HERV	MER101	internal	chr15	101855112	101859449	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4F13P	ENSG00000214344	4788	OR4F28P	ENSG00000257109	16515	None	None
ERV316A3_15q26.3c	HERV	ERV316A3	oneside	chr15	101948690	101950227	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4G6P	ENSG00000275771	10220	FAM138E	ENSG00000248893	4658	None	None
HERV3_16p13.3	HERV	HERV3	internal	chr16	43442	46385	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IL9RP3	ENSG00000226942	5121	POLR3K	ENSG00000161980	22	None	None
ERVLB4_16p13.3a	HERV	ERVLB4	internal	chr16	1935021	1937225	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MSRB1	ENSG00000198736	985	HS3ST6	ENSG00000162040	16606	None	None
PABLA_16p13.3a	HERV	PABLA	internal	chr16	2258735	2260147	+	noncoding	RNPS1	protein_coding	ANTISENSE	ENSG00000205937	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PABLA_16p13.3b	HERV	PABLA	oneside	chr16	2260399	2262137	+	noncoding	RNPS1	protein_coding	ANTISENSE	ENSG00000205937	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML4_16p13.3	HERV	HML4	prototype	chr16	2660262	2670537	-	coding	ERVK13-1	lncRNA	SENSE	ENSG00000260565	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr16:2664398-2664417
HML3_16p13.3	HERV	HML3	prototype	chr16	3076839	3081509	-	noncoding	IL32,AC108134.3	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000008517,ENSG00000262370	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr16:3077096-3077122
ERVLE_16p13.3a	HERV	ERVLE	internal	chr16	3126086	3127570	-	noncoding	ZNF213-AS1	lncRNA	SENSE	ENSG00000263072	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_16p13.3b	HERV	ERVLE	internal	chr16	3154472	3155580	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108134.2	ENSG00000261889	1156	CASP16P	ENSG00000228146	4509	None	None
ERVLB4_16p13.3b	HERV	ERVLB4	oneside	chr16	4034057	4035336	-	noncoding	ADCY9	protein_coding	SENSE	ENSG00000162104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_16p13.3c	HERV	ERVLB4	internal	chr16	5237519	5238120	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBFOX1	ENSG00000078328	1682	AC074051.5	ENSG00000285567	1697	None	None
HERVH_16p13.2a	HERV	HERVH	prototype	chr16	7814737	7820397	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005774.1	ENSG00000252138	87786	AC093515.1	ENSG00000260289	58402	None	None
HERVH_16p13.2e	HERV	HERVH	tandem*	chr16	8833043	8845457	-	noncoding	PMM2	protein_coding	ANTISENSE	ENSG00000140650	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr16:8842168-8842180
MER4B_16p13.2	HERV	MER4B	internal	chr16	9505921	9506699	-	noncoding	AC012178.1	lncRNA	ANTISENSE	ENSG00000260071	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_16p13.2b	HERV	HERVH	prototype	chr16	9670530	9677301	-	noncoding	AC007218.1	lncRNA	SENSE	ENSG00000260362	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr16:9673920-9674430	chr16:9674407-9674430
HERVH_16p13.2c	HERV	HERVH	oneside	chr16	10283161	10286701	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022168.1	ENSG00000285543	55580	ATF7IP2	ENSG00000166669	39733	None	None
HERVH_16p13.2d	HERV	HERVH	oneside	chr16	10292854	10295234	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022168.1	ENSG00000285543	65273	ATF7IP2	ENSG00000166669	31200	None	None
HML3_16p13.13	HERV	HML3	prototype	chr16	10417952	10424337	-	noncoding	ATF7IP2	protein_coding	ANTISENSE	ENSG00000166669	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVI_16p13.13	HERV	HERVI	oneside	chr16	10446457	10447680	-	noncoding	ATF7IP2,AC131649.2	protein_coding,TEC	ANTISENSE,SENSE	ENSG00000166669,ENSG00000279662	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr16:10447369-10447584	None
HERVIP10F_16p13.13	HERV	HERVIP10F	prototype	chr16	10485767	10495203	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATF7IP2	ENSG00000166669	2129	RNU6-633P	ENSG00000199482	1069	None	None
HERVH_16p13.12	HERV	HERVH	prototype	chr16	13352583	13358061	-	noncoding	U91319.1	lncRNA	ANTISENSE	ENSG00000262801	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_16p13.12	HERV	ERVL	oneside	chr16	13466039	13467642	+	noncoding	U91319.1	lncRNA	SENSE	ENSG00000262801	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_16p13.12	HERV	ERVLE	internal	chr16	13892332	13894259	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	U95743.1	ENSG00000262267	112572	ERCC4	ENSG00000175595	25895	None	None
MER101_16p13.11	HERV	MER101	internal	chr16	15383093	15384195	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPIPA5	ENSG00000183793	2046	AC140504.1	ENSG00000261130	11559	None	None
ERV316A3_16p12.3	HERV	ERV316A3	prototype	chr16	16803687	16805134	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC098965.1	ENSG00000261748	147368	AC092326.1	ENSG00000279729	41222	None	None
ERVLB4_16p12.3	HERV	ERVLB4	internal	chr16	16924193	16926476	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC098965.1	ENSG00000261748	26026	AC092326.1	ENSG00000279729	161728	None	None
HERVH_16p12.3	HERV	HERVH	prototype	chr16	18990537	18997301	-	noncoding	TMC7	protein_coding	ANTISENSE	ENSG00000170537	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_16p12.3	HERV	MER41	internal	chr16	19079920	19081944	+	noncoding	COQ7	protein_coding	SENSE	ENSG00000167186	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVL_16p12.3	HERV	ERVL	prototype	chr16	19272499	19281613	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CLEC19A	ENSG00000261210	4118	SYT17	ENSG00000103528	4167	None	None
HERVK14C_16p12.3	HERV	HERVK14C	prototype	chr16	19393582	19402152	-	coding	AC130456.2	lncRNA	SENSE	ENSG00000259925	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr16:19393729-19393736
MER61_16p12.3	HERV	MER61	prototype	chr16	19402791	19407864	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMC5	ENSG00000103534	2632	AC130456.2	ENSG00000259925	1098	None	None
HERVL_16p12.3a	HERV	HERVL	oneside	chr16	20452113	20454551	+	noncoding	ACSM2A	protein_coding	SENSE	ENSG00000183747	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
LTR25_16p12.3a	HERV	LTR25	internal	chr16	20496266	20498364	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC137056.2	ENSG00000280306	6607	ACSM2B	ENSG00000066813	37862	None	None
LTR25_16p12.3b	HERV	LTR25	internal	chr16	20524933	20527456	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ACSM2B	ENSG00000066813	8770	AC137056.2	ENSG00000280306	35274	None	None
HERVL_16p12.3b	HERV	HERVL	oneside	chr16	20573337	20575775	-	noncoding	ACSM2B	protein_coding	SENSE	ENSG00000066813	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML1_16p12.3a	HERV	HML1	oneside	chr16	20641357	20642589	+	noncoding	ACSM3,ACSM1	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000005187,ENSG00000166743	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_16p12.3	HERV	HERVIP10FH	internal	chr16	20642834	20644949	+	coding	ACSM3,ACSM1	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000005187,ENSG00000166743	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_16p12.3	HERV	HERVW	internal	chr16	20644952	20646904	+	noncoding	ACSM3,ACSM1	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000005187,ENSG00000166743	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_16p12.3b	HERV	HML1	oneside	chr16	20646892	20648152	+	noncoding	ACSM3,ACSM1	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000005187,ENSG00000166743	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_16p12.3a	HERV	MER4B	oneside	chr16	20649160	20652551	+	noncoding	ACSM3,ACSM1	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000005187,ENSG00000166743	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_16p12.3b	HERV	MER4B	oneside	chr16	20655409	20660157	+	noncoding	ACSM3,ACSM1	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000005187,ENSG00000166743	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_16p12.2a	HERV	MER101	internal	chr16	21427157	21428254	+	noncoding	NPIPB3	protein_coding	ANTISENSE	ENSG00000169246	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_16p12.2b	HERV	MER101	internal	chr16	21859437	21860534	+	noncoding	NPIPB4	protein_coding	ANTISENSE	ENSG00000185864	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_16p12.2c	HERV	MER101	internal	chr16	22510650	22511743	-	noncoding	NPIPB5	protein_coding	ANTISENSE	ENSG00000243716	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_16p12.2	HERV	ERVL	oneside	chr16	23992260	23998394	+	noncoding	PRKCB	protein_coding	SENSE	ENSG00000166501	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_16p12.1a	HERV	ERVLE	internal	chr16	24512646	24515513	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008938.1	ENSG00000260072	17469	RBBP6	ENSG00000122257	22180	None	None
ERVLE_16p12.1b	HERV	ERVLE	internal	chr16	24799588	24800616	-	noncoding	TNRC6A	protein_coding	ANTISENSE	ENSG00000090905	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_16p12.1a	HERV	PRIMA41	internal	chr16	25140926	25142814	-	noncoding	LCMT1,LCMT1-AS2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000205629,ENSG00000260034	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_16p12.1b	HERV	PRIMA41	internal	chr16	25142911	25148818	-	noncoding	LCMT1,LCMT1-AS2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000205629,ENSG00000260034	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr16:25146344-25146380,chr16:25148753-25148766
ERV316A3_16p12.1	HERV	ERV316A3	oneside	chr16	28287960	28288926	-	noncoding	AC138904.3,SBK1,AC138904.1	lncRNA,protein_coding,lncRNA	ANTISENSE,ANTISENSE,SENSE	ENSG00000283662,ENSG00000188322,ENSG00000246465	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_16p12.1c	HERV	ERVLE	internal	chr16	28418482	28419698	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138894.4	ENSG00000275654	31946	CDC37P2	ENSG00000261089	3464	None	None
MER101_16p11.2a	HERV	MER101	internal	chr16	28635181	28636282	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPIPB8	ENSG00000255524	1372	SULT1A1	ENSG00000196502	11556	None	None
ERVLE_16p11.2a	HERV	ERVLE	internal	chr16	28695315	28696541	+	noncoding	AC145285.4,EIF3C	unprocessed_pseudogene,protein_coding	ANTISENSE,SENSE	ENSG00000261419,ENSG00000184110	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_16p11.2b	HERV	ERVLE	internal	chr16	28809507	28813917	+	noncoding	AC145285.2	lncRNA	SENSE	ENSG00000251417	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_16p11.2	HERV	HERVL	oneside	chr16	29002652	29008043	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LAT	ENSG00000213658	11869	NPIPB10P	ENSG00000196796	30612	None	None
MER101_16p11.2b	HERV	MER101	internal	chr16	29405860	29406960	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPIPB11	ENSG00000254206	1831	SMG1P6	ENSG00000254634	18840	None	None
MER101_16p11.2c	HERV	MER101	internal	chr16	29507644	29508743	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPIPB12	ENSG00000169203	1645	SMG1P2	ENSG00000205534	18825	None	None
HUERSP3B_16p11.2a	HERV	HUERSP3B	oneside	chr16	29708769	29715758	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	QPRT	ENSG00000103485	10070	RN7SKP127	ENSG00000222375	15293	chr16:29709793-29709808	chr16:29709177-29709185,chr16:29709190-29709207
HUERSP3B_16p11.2b	HERV	HUERSP3B	oneside	chr16	29716021	29719561	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	QPRT	ENSG00000103485	17322	RN7SKP127	ENSG00000222375	11490	None	None
MER101_16p11.2d	HERV	MER101	internal	chr16	30247627	30248726	+	noncoding	NPIPB13	protein_coding	ANTISENSE	ENSG00000198064	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH21_16p11.2	HERV	HERVFH21	prototype	chr16	30541765	30548758	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF764	ENSG00000169951	5006	AC002310.3	ENSG00000260494	3534	None	chr16:30548245-30548289
HML6_16p11.2	HERV	HML6	prototype	chr16	30615683	30624281	-	noncoding	ZNF689	protein_coding	SENSE	ENSG00000156853	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_16p11.2c	HERV	ERVLE	internal	chr16	30843007	30844751	-	noncoding	BCL7C	protein_coding	SENSE	ENSG00000099385	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr16:30844642-30844936	None
ERVLE_16p11.2d	HERV	ERVLE	internal	chr16	30846716	30848540	+	noncoding	BCL7C	protein_coding	ANTISENSE	ENSG00000099385	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_16p11.2	HERV	HERVH	prototype	chr16	30859452	30864906	+	noncoding	BCL7C	protein_coding	ANTISENSE	ENSG00000099385	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_16p11.2a	HERV	HML3	prototype	chr16	31539720	31543400	+	noncoding	LINC02190	lncRNA	ANTISENSE	ENSG00000261475	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML1_16p11.2	HERV	HML1	prototype	chr16	31659961	31668393	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VN1R66P	ENSG00000237185	10739	RBM22P12	ENSG00000260631	12454	None	None
HML5_16p11.2	HERV	HML5	oneside	chr16	31763078	31767906	-	noncoding	ZNF720	protein_coding	ANTISENSE	ENSG00000197302	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_16p11.2a	HERV	HERVIP10FH	oneside	chr16	31848236	31850266	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	VN1R3	ENSG00000180663	39392	RBM22P13	ENSG00000261284	13367	None	None
HERVIP10F_16p11.2	HERV	HERVIP10F	oneside	chr16	31850239	31852659	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VN1R3	ENSG00000180663	41395	RBM22P13	ENSG00000261284	10974	None	chr16:31850640-31850641
HERVIP10FH_16p11.2b	HERV	HERVIP10FH	internal	chr16	31850804	31851322	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VN1R3	ENSG00000180663	41960	RBM22P13	ENSG00000261284	12311	None	None
MER4_16p11.2a	HERV	MER4	oneside	chr16	32041066	32046048	+	noncoding	AC142381.4	transcribed_processed_pseudogene	ANTISENSE	ENSG00000261727	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_16p11.2a	HERV	ERV316A3	oneside	chr16	32444792	32446352	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138915.3	ENSG00000261541	8260	PABPC1P13	ENSG00000260307	3633	None	None
ERV316A3_16p11.2b	HERV	ERV316A3	internal	chr16	32449242	32450522	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138915.3	ENSG00000261541	4090	PABPC1P13	ENSG00000260307	8083	None	None
MER4_16p11.2b	HERV	MER4	oneside	chr16	32984295	32989274	+	noncoding	AC142086.5	transcribed_processed_pseudogene	ANTISENSE	ENSG00000261259	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_16p11.2	HERV	ERVLB4	internal	chr16	33673000	33673543	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC142384.1	ENSG00000259882	50453	BMS1P8	ENSG00000260518	13482	None	None
MER4_16p11.2c	HERV	MER4	oneside	chr16	33864805	33868791	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC140658.3	ENSG00000260525	6248	IGHV3OR16-11	ENSG00000270318	5453	None	None
MER4_16p11.2d	HERV	MER4	internal	chr16	33868862	33869781	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC140658.3	ENSG00000260525	5258	IGHV3OR16-11	ENSG00000270318	9510	None	None
HML3_16p11.2b	HERV	HML3	oneside	chr16	34339330	34343308	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BCLAF1P2	ENSG00000279800	70681	FP325313.1	ENSG00000284209	10308	None	None
HML2_16p11.2a	HERV	HML2	oneside	chr16	34412057	34414804	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FP325313.2	ENSG00000286968	31762	FP325313.3	ENSG00000288300	22230	None	None
HML2_16p11.2b	HERV	HML2	oneside	chr16	34997026	34999771	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02184	ENSG00000260854	17182	AC135776.1	ENSG00000179755	21978	None	None
HML3_16p11.2c	HERV	HML3	oneside	chr16	35068520	35074915	-	noncoding	CCNYL3,CLUHP11	unprocessed_pseudogene,unprocessed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000216671,ENSG00000278138	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_16p11.2	HERV	HERVL40	internal	chr16	35239413	35241130	+	noncoding	AC023824.3	lncRNA	SENSE	ENSG00000260958	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVS71_16p11.2	HERV	HERVS71	prototype	chr16	35267618	35277076	-	coding	AC023824.3	lncRNA	ANTISENSE	ENSG00000260958	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_16p11.1a	HERV	HERVL40	internal	chr16	35328625	35331071	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023824.3	ENSG00000260958	44479	FRG2HP	ENSG00000260846	4206	None	None
HERVL40_16p11.1b	HERV	HERVL40	internal	chr16	35377642	35379842	+	noncoding	LINC01566	lncRNA	SENSE	ENSG00000259841	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_16p11.1c	HERV	HERVL40	internal	chr16	35399395	35400747	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01566	ENSG00000259841	8811	FRG2IP	ENSG00000260598	5000	None	None
MER34B_16p11.1	HERV	MER34B	internal	chr16	35437545	35439581	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF971P	ENSG00000214581	7317	AC018558.4	ENSG00000278681	1204	None	None
HERVL40_16p11.1d	HERV	HERVL40	internal	chr16	35465169	35467390	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018558.6	ENSG00000287163	12182	FRG2DP	ENSG00000261711	10024	None	None
HML6_16p11.1	HERV	HML6	prototype	chr16	35516604	35524479	+	noncoding	AC018558.7	lncRNA	SENSE	ENSG00000287448	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_16p11.1a	HERV	HERVIP10FH	prototype	chr16	35594879	35600721	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KIF18BP1	ENSG00000260746	35966	C1QL1P1	ENSG00000260134	19385	chr16:35598919-35599238	None
HARLEQUIN_16p11.1	HERV	HARLEQUIN	prototype	chr16	35614639	35621364	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KIF18BP1	ENSG00000260746	15323	C1QL1P1	ENSG00000260134	39145	None	None
HERVIP10FH_16p11.1b	HERV	HERVIP10FH	prototype	chr16	35721970	35723346	-	noncoding	AC106785.1	processed_pseudogene	SENSE	ENSG00000260522	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr16:35722356-35722562	None
HERVH_16p11.1	HERV	HERVH	prototype	chr16	35736424	35745766	-	noncoding	LINC02167	lncRNA	ANTISENSE	ENSG00000261122	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr16:35743974-35744298	chr16:35745674-35745682
HML5_16p11.1a	HERV	HML5	oneside	chr16	35797757	35801819	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC106785.2	ENSG00000260611	10870	HMGN2P41	ENSG00000261620	1050	None	None
HERVKC4_16p11.1	HERV	HERVKC4	internal	chr16	35803283	35804041	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN2P41	ENSG00000261620	3	VN1R70P	ENSG00000261515	32845	chr16:35803274-35803662	None
MER101_16p11.1a	HERV	MER101	oneside	chr16	35816009	35819288	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN2P41	ENSG00000261620	12729	VN1R70P	ENSG00000261515	17598	None	None
LTR57_16p11.1	HERV	LTR57	internal	chr16	35818014	35819013	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN2P41	ENSG00000261620	14734	VN1R70P	ENSG00000261515	17873	None	None
MER101_16p11.1b	HERV	MER101	internal	chr16	35819388	35820979	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN2P41	ENSG00000261620	16108	VN1R70P	ENSG00000261515	15907	None	None
HML5_16p11.1b	HERV	HML5	prototype	chr16	35855248	35857210	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VN1R70P	ENSG00000261515	17516	AC116553.1	ENSG00000261782	21826	None	None
MER101_16p11.1c	HERV	MER101	internal	chr16	35858777	35861033	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VN1R70P	ENSG00000261515	21045	AC116553.1	ENSG00000261782	18003	None	None
HERVS71_16p11.1	HERV	HERVS71	unknown	chr16	35897003	35902579	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC116553.2	ENSG00000279666	538	AC116553.1	ENSG00000261782	17505	None	None
HERVH48_16p11.1	HERV	HERVH48	oneside	chr16	35903115	35910785	-	noncoding	AC116553.2	TEC	ANTISENSE	ENSG00000279666	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV4_16q11.2	HERV	HERV4	oneside	chr16	46469264	46473470	-	noncoding	ANKRD26P1	transcribed_unprocessed_pseudogene	SENSE	ENSG00000261239	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER61_16q12.1	HERV	MER61	oneside	chr16	47489299	47493193	-	noncoding	PHKB	protein_coding	ANTISENSE	ENSG00000102893	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr16:47493031-47493395	None
ERVLE_16q12.1a	HERV	ERVLE	internal	chr16	47755805	47756364	-	noncoding	LINC02133	lncRNA	ANTISENSE	ENSG00000261231	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_16q12.1a	HERV	HERVH	oneside	chr16	47838741	47844564	+	noncoding	LINC02133	lncRNA	SENSE	ENSG00000261231	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_16q12.1b	HERV	ERVLE	internal	chr16	48678466	48679181	-	noncoding	AC007611.1	lncRNA	ANTISENSE	ENSG00000260086	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_16q12.1a	HERV	ERV316A3	prototype	chr16	49100649	49107489	-	noncoding	AC044798.3	lncRNA	SENSE	ENSG00000287469	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_16q12.1	HERV	ERVLB4	oneside	chr16	50128785	50137870	-	noncoding	AC007610.7	lncRNA	ANTISENSE	ENSG00000287444	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4B_16q12.1	HERV	MER4B	internal	chr16	50330448	50330982	+	noncoding	BRD7	protein_coding	ANTISENSE	ENSG00000166164	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_16q12.1b	HERV	ERV316A3	internal	chr16	50895371	50898985	+	noncoding	LINC02128	lncRNA	SENSE	ENSG00000261241	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_16q12.1b	HERV	HERVH	internal	chr16	52216073	52217397	-	noncoding	AC007333.2	lncRNA	SENSE	ENSG00000260975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_16q12.1	HERV	ERVL	oneside	chr16	52356643	52359722	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CASC22	ENSG00000260887	76005	TOX3	ENSG00000103460	76695	None	None
ERVLE_16q12.1c	HERV	ERVLE	internal	chr16	52361747	52363494	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CASC22	ENSG00000260887	81109	TOX3	ENSG00000103460	72923	None	None
ERV316A3_16q12.2a	HERV	ERV316A3	internal	chr16	52916110	52918140	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PHBP21	ENSG00000260326	16673	AC026462.4	ENSG00000261261	238363	None	None
ERVLE_16q12.2	HERV	ERVLE	internal	chr16	53577294	53579374	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPGRIP1L	ENSG00000103494	18779	AC007497.2	ENSG00000287909	31605	None	None
ERV316A3_16q12.2b	HERV	ERV316A3	prototype	chr16	55114281	55116183	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC109136.1	ENSG00000285775	64963	AC109462.1	ENSG00000259283	143786	None	None
HERVFRD_16q12.2	HERV	HERVFRD	unknown	chr16	55628434	55635551	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LPCAT2	ENSG00000087253	41768	SLC6A2	ENSG00000103546	20053	None	None
ERV316A3_16q12.2c	HERV	ERV316A3	internal	chr16	55882267	55884134	-	noncoding	CES5A	protein_coding	SENSE	ENSG00000159398	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_16q12.2d	HERV	ERV316A3	oneside	chr16	55884185	55885814	-	noncoding	CES5A	protein_coding	SENSE	ENSG00000159398	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_16q12.2e	HERV	ERV316A3	internal	chr16	55885817	55887445	+	noncoding	CES5A	protein_coding	ANTISENSE	ENSG00000159398	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr16:55887380-55887740	None
ERVL_16q13	HERV	ERVL	oneside	chr16	56093208	56095519	-	noncoding	AC040168.1	lncRNA	SENSE	ENSG00000246379	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_16q13a	HERV	ERVLB4	prototype	chr16	56612708	56615580	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MT1L	ENSG00000260549	1896	AC026461.3	ENSG00000260823	1333	chr16:56612640-56612800	chr16:56614580-56614586,chr16:56614591-56614598,chr16:56614620-56614627,chr16:56614660-56614670
ERVLB4_16q13b	HERV	ERVLB4	oneside	chr16	56947521	56950172	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HERPUD1	ENSG00000051108	2657	CETP	ENSG00000087237	11751	None	None
HERV9_16q21	HERV	HERV9	oneside	chr16	57394802	57399143	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCL17	ENSG00000102970	5624	CX3CL1	ENSG00000006210	9758	None	None
ERV316A3_16q21a	HERV	ERV316A3	oneside	chr16	58247275	58248778	-	noncoding	CCDC113	protein_coding	ANTISENSE	ENSG00000103021	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_16q21a	HERV	MER4B	prototype	chr16	58307595	58317295	+	noncoding	GINS3	protein_coding	SENSE	ENSG00000181938	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_16q21a	HERV	ERVL	oneside	chr16	59058257	59061249	+	noncoding	AC106793.1	lncRNA	SENSE	ENSG00000245768	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_16q21b	HERV	ERV316A3	internal	chr16	59119458	59120993	-	noncoding	AC106793.1	lncRNA	ANTISENSE	ENSG00000245768	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_16q21c	HERV	ERV316A3	internal	chr16	59438684	59439943	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC106793.1	ENSG00000245768	239289	RNU4-58P	ENSG00000200062	100183	None	None
HERVH_16q21a	HERV	HERVH	prototype	chr16	59514911	59522964	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU4-58P	ENSG00000200062	17162	AC106793.1	ENSG00000245768	315516	None	None
ERVLB4_16q21a	HERV	ERVLB4	internal	chr16	59590524	59591669	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU4-58P	ENSG00000200062	50258	DUXAP11	ENSG00000270222	63933	None	None
HERVK11_16q21	HERV	HERVK11	prototype	chr16	59621926	59625900	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DUXAP11	ENSG00000270222	29702	RNU4-58P	ENSG00000200062	81660	None	None
ERVL_16q21b	HERV	ERVL	oneside	chr16	59722341	59726114	-	coding	APOOP5	transcribed_processed_pseudogene	SENSE	ENSG00000260240	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_16q21b	HERV	MER4B	internal	chr16	59856918	59858308	-	noncoding	LINC02141	lncRNA	ANTISENSE	ENSG00000261807	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_16q21d	HERV	ERV316A3	internal	chr16	59888234	59889096	+	noncoding	LINC02141	lncRNA	SENSE	ENSG00000261807	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_16q21b	HERV	HERVH	prototype	chr16	60078535	60084578	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02141	ENSG00000261807	24562	AC009081.2	ENSG00000261436	261900	None	None
ERV316A3_16q21e	HERV	ERV316A3	oneside	chr16	60151953	60154175	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02141	ENSG00000261807	97980	AC009081.2	ENSG00000261436	192303	None	None
ERV316A3_16q21f	HERV	ERV316A3	internal	chr16	60457778	60461226	-	noncoding	AC009081.2	lncRNA	ANTISENSE	ENSG00000261436	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_16q21	HERV	HERVL	prototype	chr16	60846981	60853639	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GNPATP	ENSG00000259844	190332	AC009169.1	ENSG00000261178	72094	None	None
ERV316A3_16q21g	HERV	ERV316A3	oneside	chr16	61122624	61124508	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092125.2	ENSG00000286653	513725	RPS27AP16	ENSG00000224631	66660	None	chr16:61123062-61123063
ERV316A3_16q21h	HERV	ERV316A3	prototype	chr16	61142873	61146736	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092125.2	ENSG00000286653	491497	RPS27AP16	ENSG00000224631	86909	None	None
ERVLE_16q21a	HERV	ERVLE	internal	chr16	61409714	61410731	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS27AP16	ENSG00000224631	353750	AC092125.2	ENSG00000286653	227502	None	None
ERV316A3_16q21i	HERV	ERV316A3	prototype	chr16	62758823	62761060	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009110.1	ENSG00000231589	160374	AC010546.1	ENSG00000260332	47162	None	None
ERVLE_16q21b	HERV	ERVLE	internal	chr16	62823065	62825230	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC040174.1	ENSG00000261502	231556	AC010546.1	ENSG00000260332	14359	None	None
HERVH_16q21c	HERV	HERVH	prototype	chr16	62979240	62985208	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC040174.1	ENSG00000261502	71578	AC010546.1	ENSG00000260332	170534	None	None
ERV316A3_16q21j	HERV	ERV316A3	oneside	chr16	63028699	63033107	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010546.1	ENSG00000260332	219993	AC040174.1	ENSG00000261502	23679	None	None
ERVL_16q21c	HERV	ERVL	internal	chr16	64186821	64187242	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093536.2	ENSG00000260715	30247	AC012322.1	ENSG00000261028	55366	None	None
ERV316A3_16q21k	HERV	ERV316A3	oneside	chr16	64835948	64837132	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDH11	ENSG00000140937	106621	AC009101.1	ENSG00000260068	97384	None	None
ERV316A3_16q21l	HERV	ERV316A3	unknown	chr16	64837220	64841722	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDH11	ENSG00000140937	102031	AC009101.1	ENSG00000260068	98656	None	None
MER41_16q21	HERV	MER41	oneside	chr16	65016643	65022129	-	noncoding	CDH11	protein_coding	SENSE	ENSG00000140937	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_16q21d	HERV	HERVH	prototype	chr16	65229805	65235349	-	noncoding	AC009055.2,AC009055.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000260834,ENSG00000260364	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr16:65234892-65234933
HERVH_16q21e	HERV	HERVH	prototype	chr16	65275256	65279034	-	noncoding	AC009055.1	lncRNA	ANTISENSE	ENSG00000260364	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_16q21c	HERV	ERVLE	internal	chr16	65591533	65592569	+	noncoding	AC092138.2	lncRNA	SENSE	ENSG00000261818	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_16q21b	HERV	ERVLB4	internal	chr16	66197005	66197729	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025281.1	ENSG00000261234	258552	RNA5SP428	ENSG00000201999	104080	None	None
MER101_16q22.1a	HERV	MER101	internal	chr16	68938694	68942048	-	noncoding	TANGO6,AC009137.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000103047,ENSG00000260999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_16q22.1	HERV	MER41	oneside	chr16	68997155	69000586	-	noncoding	TANGO6	protein_coding	ANTISENSE	ENSG00000103047	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_16q22.1b	HERV	MER101	internal	chr16	69998246	69998825	+	noncoding	AC009022.1	lncRNA	ANTISENSE	ENSG00000196696	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_16q22.1	HERV	HERVH	tandem*	chr16	70616524	70626119	-	noncoding	IL34	protein_coding	ANTISENSE	ENSG00000157368	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR23_16q22.2	HERV	LTR23	internal	chr16	72031363	72032616	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TXNL4B	ENSG00000140830	11673	DHODH	ENSG00000102967	3699	None	None
HERVI_16q22.2	HERV	HERVI	prototype	chr16	72064269	72073376	+	noncoding	TXNL4B,HPR	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000140830,ENSG00000261701	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr16:72073240-72073250
ERV316A3_16q22.2	HERV	ERV316A3	internal	chr16	72750696	72752598	-	noncoding	AC004943.2	lncRNA	ANTISENSE	ENSG00000259768	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_16q22.3a	HERV	ERVLE	internal	chr16	73511542	73513833	+	noncoding	ZFHX3	protein_coding	ANTISENSE	ENSG00000140836	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_16q22.3b	HERV	ERVLE	internal	chr16	74012921	74017551	-	noncoding	AC138627.1	lncRNA	SENSE	ENSG00000261404	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_16q23.1a	HERV	ERV316A3	oneside	chr16	74611569	74615756	-	noncoding	HSPE1P7	processed_pseudogene	SENSE	ENSG00000270945	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_16q23.1a	HERV	MER4	oneside	chr16	74806330	74808407	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FA2H	ENSG00000103089	31499	AC009132.1	ENSG00000261458	34180	None	None
MER4_16q23.1b	HERV	MER4	oneside	chr16	74808424	74811704	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FA2H	ENSG00000103089	33593	AC009132.1	ENSG00000261458	30883	None	None
MER4_16q23.1d	HERV	MER4	insert*	chr16	75118776	75129829	+	noncoding	AC099508.2	lncRNA	SENSE	ENSG00000261058	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
LTR46_16q23.1	HERV	LTR46	oneside	chr16	75682529	75684785	-	noncoding	TERF2IP	protein_coding	ANTISENSE	ENSG00000166848	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr16:75683024-75683293	None
HERVFRD_16q23.1	HERV	HERVFRD	oneside	chr16	75707966	75712370	+	noncoding	TERF2IP,ATP5PBP7	protein_coding,processed_pseudogene	SENSE,ANTISENSE	ENSG00000166848,ENSG00000261424	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
LTR57_16q23.1	HERV	LTR57	internal	chr16	75740951	75742238	+	noncoding	TERF2IP	protein_coding	SENSE	ENSG00000166848	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_16q23.1c	HERV	MER4	internal	chr16	75742322	75743897	+	noncoding	TERF2IP	protein_coding	SENSE	ENSG00000166848	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV4_16q23.1a	HERV	HERV4	internal	chr16	76034774	76035695	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099511.1	ENSG00000260223	71588	RNA5SP430	ENSG00000199299	173617	None	None
HERV4_16q23.1b	HERV	HERV4	oneside	chr16	76035719	76037318	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099511.1	ENSG00000260223	69965	RNA5SP430	ENSG00000199299	174562	None	None
ERVLB4_16q23.1	HERV	ERVLB4	internal	chr16	76059019	76060408	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP430	ENSG00000199299	197862	AC099511.1	ENSG00000260223	46875	None	None
HERVL_16q23.1	HERV	HERVL	prototype	chr16	76433980	76437377	-	noncoding	CNTNAP4,AC106741.2	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000152910,ENSG00000287694	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_16q23.1b	HERV	ERV316A3	oneside	chr16	76561884	76565124	-	noncoding	AC106741.2	protein_coding	ANTISENSE	ENSG00000287694	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_16q23.1	HERV	ERVLE	internal	chr16	76957722	76958772	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC106729.1	ENSG00000259995	29553	AC106733.1	ENSG00000279856	145488	None	None
HERVE_16q23.1	HERV	HERVE	oneside	chr16	78058573	78060638	-	coding	AC079414.1,CLEC3A	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000261540,ENSG00000166509	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_16q23.2	HERV	ERVLE	internal	chr16	81369168	81370331	+	noncoding	GAN	protein_coding	SENSE	ENSG00000261609	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_16q23.3	HERV	ERVLE	internal	chr16	82146789	82147578	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MPHOSPH6	ENSG00000135698	220	AC092142.1	ENSG00000261235	7158	None	None
MER4_16q24.1	HERV	MER4	oneside	chr16	84489697	84495590	+	noncoding	MEAK7	protein_coding	ANTISENSE	ENSG00000140950	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr16:84490277-84490359	None
ERV316A3_16q24.1	HERV	ERV316A3	internal	chr16	84676157	84677543	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KLHL36	ENSG00000135686	8471	USP10	ENSG00000103194	22435	None	None
HERVL_16q24.1	HERV	HERVL	prototype	chr16	84855240	84861709	-	noncoding	AC025280.3,CRISPLD2	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000285848,ENSG00000103196	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr16:84855483-84855489
HERVFH19_16q24.1	HERV	HERVFH19	internal	chr16	85886945	85888002	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018695.7	ENSG00000279907	24933	IRF8	ENSG00000140968	11160	None	None
HERVH_16q24.1a	HERV	HERVH	prototype	chr16	86278095	86281279	+	noncoding	LINC01081	lncRNA	ANTISENSE	ENSG00000268754	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr16:86278740-86279108	None
HERVH_16q24.1b	HERV	HERVH	prototype	chr16	86742019	86747655	-	noncoding	LINC02188	lncRNA	ANTISENSE	ENSG00000261175	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL74_16q24.3	HERV	HERVL74	oneside	chr16	89231483	89232777	+	noncoding	ZNF778	protein_coding	SENSE	ENSG00000170100	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
MER4_16q24.3	HERV	MER4	oneside	chr16	89672252	89684187	+	noncoding	AC010538.1,CDK10,LINC02166	lncRNA,protein_coding,lncRNA	SENSE,SENSE,ANTISENSE	ENSG00000275734,ENSG00000185324,ENSG00000260259	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_16q24.3	HERV	PRIMA41	oneside	chr16	90090709	90093890	+	noncoding	PRDM7,TUBB8P7	protein_coding,transcribed_unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000126856,ENSG00000261812	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_17p13.3a	HERV	ERVLB4	internal	chr17	986091	987370	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TIMM22	ENSG00000177370	9759	NXN	ENSG00000167693	6315	None	None
ERVLB4_17p13.3b	HERV	ERVLB4	oneside	chr17	987594	988954	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TIMM22	ENSG00000177370	8175	NXN	ENSG00000167693	7818	None	None
HERVL_17p13.2a	HERV	HERVL	internal	chr17	3425603	3427174	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR1E2	ENSG00000127780	5696	OR3A3	ENSG00000159961	1533	None	None
ERVLE_17p13.2	HERV	ERVLE	internal	chr17	3438518	3439640	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025125.1	ENSG00000280268	283	OR1E2	ENSG00000127780	4677	None	None
HERVL_17p13.2b	HERV	HERVL	oneside	chr17	4118054	4120551	-	coding	ZZEF1	protein_coding	SENSE	ENSG00000074755	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_17p13.2	HERV	MER101	internal	chr17	5831630	5834628	+	noncoding	AC007846.1,AC007846.2	lncRNA,protein_coding	SENSE,SENSE	ENSG00000284837,ENSG00000285471	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr17:5832963-5833172	None
ERVLB4_17p13.2	HERV	ERVLB4	internal	chr17	5936121	5937947	+	noncoding	AC007846.2	protein_coding	SENSE	ENSG00000285471	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_17p13.1	HERV	HERVH	oneside	chr17	6732965	6737452	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004706.2	ENSG00000262990	12233	SLC13A5	ENSG00000141485	19588	None	None
HML3_17p13.1	HERV	HML3	prototype	chr17	6875146	6881530	-	noncoding	ALOX12P2,ALOX12-AS1	transcribed_unprocessed_pseudogene,lncRNA	ANTISENSE,SENSE	ENSG00000262943,ENSG00000215067	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV4_17p13.1	HERV	HERV4	prototype	chr17	6936343	6940666	-	noncoding	ALOX12P2,ALOX12-AS1	transcribed_unprocessed_pseudogene,lncRNA	ANTISENSE,SENSE	ENSG00000262943,ENSG00000215067	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr17:6936512-6936744,chr17:6939588-6939835	chr17:6937122-6937125,chr17:6940400-6940410
ERVLE_17p13.1	HERV	ERVLE	internal	chr17	7148081	7150211	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7AP64	ENSG00000213876	6489	ASGR1	ENSG00000141505	23220	None	None
MER61_17p13.1	HERV	MER61	oneside	chr17	7522858	7529262	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016876.1	ENSG00000201489	7834	POLR2A	ENSG00000181222	8242	None	None
HML2_17p13.1	HERV	HML2	oneside	chr17	8056337	8063901	+	coding	AC129492.2	lncRNA	ANTISENSE	ENSG00000263427	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr17:8056882-8056886
MER4_17p13.1	HERV	MER4	oneside	chr17	8306804	8308607	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC135178.7	ENSG00000271029	9588	ARHGEF15	ENSG00000198844	1634	None	None
HERVL_17p13.1	HERV	HERVL	internal	chr17	9732553	9735186	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027045.2	ENSG00000282882	29000	USP43	ENSG00000154914	2866	None	None
MER4B_17p12a	HERV	MER4B	unknown	chr17	10915227	10918597	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC015908.2	ENSG00000263508	34332	RN7SL601P	ENSG00000243346	238858	None	None
ERV316A3_17p12a	HERV	ERV316A3	oneside	chr17	11056805	11066050	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC015908.2	ENSG00000263508	175910	RN7SL601P	ENSG00000243346	91405	None	None
HERVH_17p12	HERV	HERVH	prototype	chr17	11971756	11976947	+	noncoding	AC005410.2	lncRNA	ANTISENSE	ENSG00000266368	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_17p12	HERV	MER61	internal	chr17	13170446	13174179	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005303.1	ENSG00000273098	69507	LINC02093	ENSG00000234634	125005	None	None
MER4B_17p12b	HERV	MER4B	internal	chr17	13921043	13921829	-	noncoding	COX10-AS1	lncRNA	SENSE	ENSG00000236088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_17p12	HERV	HUERSP2	prototype	chr17	13965319	13968120	-	noncoding	COX10-AS1,AC005304.3	lncRNA,lncRNA	SENSE,SENSE	ENSG00000236088,ENSG00000266744	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV4_17p12	HERV	HERV4	unknown	chr17	13969460	13973707	+	noncoding	COX10-AS1	lncRNA	ANTISENSE	ENSG00000236088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_17p12c	HERV	MER4B	internal	chr17	14522971	14528015	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS18P12	ENSG00000230897	177061	AC022816.1	ENSG00000230647	101499	None	None
ERV316A3_17p12b	HERV	ERV316A3	oneside	chr17	14933961	14937464	-	noncoding	LINC02096	lncRNA	ANTISENSE	ENSG00000238212	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_17p11.2a	HERV	MER41	prototype	chr17	16275058	16279310	-	noncoding	PIGL	protein_coding	ANTISENSE	ENSG00000108474	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_17p11.2	HERV	HUERSP3B	prototype	chr17	16539541	16546626	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC127540.2	ENSG00000286743	10251	ZNF287	ENSG00000141040	328	None	None
ERV316A3_17p11.2a	HERV	ERV316A3	oneside	chr17	16571376	16578211	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF287	ENSG00000141040	2172	AC005822.1	ENSG00000235554	38637	None	None
ERV316A3_17p11.2b	HERV	ERV316A3	oneside	chr17	16608230	16609351	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005822.1	ENSG00000235554	7497	ZNF287	ENSG00000141040	39026	None	None
HERVL_17p11.2a	HERV	HERVL	internal	chr17	16879608	16880158	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353996.1	ENSG00000265853	13040	AC022596.2	ENSG00000283033	15385	None	None
LTR25_17p11.2	HERV	LTR25	internal	chr17	17427713	17430193	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073621.2	ENSG00000227158	4009	TSEN15P1	ENSG00000230865	26234	None	None
ERVLE_17p11.2a	HERV	ERVLE	internal	chr17	17463278	17464740	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MED9	ENSG00000141026	12254	AC073621.1	ENSG00000201741	2756	None	None
MER4_17p11.2a	HERV	MER4	oneside	chr17	19646555	19647663	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ALDH3A2	ENSG00000072210	473	SLC47A1P2	ENSG00000231625	12730	chr17:19647040-19647390	None
HERVH_17p11.2	HERV	HERVH	prototype	chr17	19888542	19893598	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC015726.1	ENSG00000270091	2992	AC015726.2	ENSG00000276406	19853	None	None
ERVLE_17p11.2b	HERV	ERVLE	internal	chr17	19985481	19988334	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005730.2	ENSG00000261033	19717	AKAP10	ENSG00000108599	7138	None	None
MER41_17p11.2b	HERV	MER41	oneside	chr17	20192871	20195560	-	noncoding	SPECC1,AC004702.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000128487,ENSG00000263494	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_17p11.2c	HERV	MER41	internal	chr17	20863724	20864398	-	noncoding	CCDC144NL	protein_coding	SENSE	ENSG00000205212	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_17p11.2b	HERV	HERVL	internal	chr17	20998063	20998876	+	noncoding	CCDC144NL-AS1	lncRNA	SENSE	ENSG00000233098	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_17p11.2	HERV	HML3	oneside	chr17	21077815	21080559	-	noncoding	LINC01563	lncRNA	ANTISENSE	ENSG00000236819	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_17p11.2b	HERV	MER4	prototype	chr17	21133190	21142900	-	noncoding	DHRS7B	protein_coding	ANTISENSE	ENSG00000109016	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr17:21141617-21141618
ERVLE_17p11.2c	HERV	ERVLE	internal	chr17	21238531	21239100	+	noncoding	NATD1	protein_coding	ANTISENSE	ENSG00000274180	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
MER4B_17p11.2a	HERV	MER4B	oneside	chr17	21567289	21568857	-	noncoding	LINC02693	lncRNA	SENSE	ENSG00000212719	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_17p11.2b	HERV	MER4B	internal	chr17	21571410	21572862	-	noncoding	LINC02693	lncRNA	SENSE	ENSG00000212719	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4B_17p11.2c	HERV	MER4B	internal	chr17	22413145	22414526	+	noncoding	AC209154.1	lncRNA	SENSE	ENSG00000276399	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4B_17p11.2d	HERV	MER4B	oneside	chr17	22417097	22418670	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC209154.1	ENSG00000276399	3353	AC132825.3	ENSG00000261020	1352	None	None
MER41_17p11.2d	HERV	MER41	internal	chr17	22565728	22566401	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC131055.2	ENSG00000275480	1022	AC132825.6	ENSG00000284263	33206	None	None
MER41_17q11.1	HERV	MER41	internal	chr17	27093444	27094138	+	noncoding	AC129926.2	lncRNA	SENSE	ENSG00000285822	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_17q11.1	HERV	ERVLE	internal	chr17	27115421	27116490	+	noncoding	AC129926.2	lncRNA	SENSE	ENSG00000285822	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_17q11.1	HERV	ERVL	internal	chr17	27273488	27274075	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC129926.1	ENSG00000265246	31827	RPL34P31	ENSG00000239223	32	None	None
HML3_17q11.2a	HERV	HML3	oneside	chr17	27684289	27686098	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC015688.1	ENSG00000263604	145	AC130289.1	ENSG00000265833	21080	None	None
HERVK11_17q11.2	HERV	HERVK11	prototype	chr17	27686099	27696448	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC130289.1	ENSG00000265833	10730	AC015688.1	ENSG00000263604	1955	None	None
HML3_17q11.2b	HERV	HML3	oneside	chr17	27696449	27702611	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC015688.1	ENSG00000263604	12305	AC130289.1	ENSG00000265833	4567	None	None
HERV9_17q11.2a	HERV	HERV9	prototype	chr17	27711912	27720960	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC130289.2	ENSG00000266416	3774	LGALS9DP	ENSG00000266786	25172	None	None
HERVE_17q11.2	HERV	HERVE	prototype	chr17	28230519	28239339	-	coding	ERVE-1	lncRNA	SENSE	ENSG00000267259	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr17:28233994-28234003,chr17:28234014-28234056
MER4_17q11.2a	HERV	MER4	oneside	chr17	28263602	28264797	-	noncoding	AC061975.4,AC061975.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000264486,ENSG00000260777	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER61_17q11.2	HERV	MER61	oneside	chr17	29433490	29437050	-	noncoding	TAOK1	protein_coding	ANTISENSE	ENSG00000160551	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_17q11.2a	HERV	ERVLE	internal	chr17	29936703	29938054	-	noncoding	EFCAB5	protein_coding	ANTISENSE	ENSG00000176927	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_17q11.2c	HERV	HML3	prototype	chr17	29985397	29991757	-	noncoding	EFCAB5	protein_coding	ANTISENSE	ENSG00000176927	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_17q11.2b	HERV	ERVLE	internal	chr17	30046266	30049234	+	noncoding	EFCAB5	protein_coding	SENSE	ENSG00000176927	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_17q11.2c	HERV	ERVLE	internal	chr17	31113848	31115873	-	noncoding	NF1	protein_coding	ANTISENSE	ENSG00000196712	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_17q11.2	HERV	HERVL	prototype	chr17	31183587	31189019	+	noncoding	NF1	protein_coding	SENSE	ENSG00000196712	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_17q11.2d	HERV	HML3	prototype	chr17	31633108	31639019	+	noncoding	AC007923.4	lncRNA	SENSE	ENSG00000266877	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV9_17q11.2b	HERV	HERV9	prototype	chr17	31762039	31772128	+	noncoding	AC007923.1	lncRNA	SENSE	ENSG00000263567	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr17:31762435-31762442,chr17:31769237-31769243,chr17:31762590-31762597
HERVH_17q11.2	HERV	HERVH	oneside	chr17	32772920	32774241	+	noncoding	MYO1D	protein_coding	ANTISENSE	ENSG00000176658	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_17q11.2b	HERV	MER4	prototype	chr17	32898096	32905976	-	noncoding	AC084809.2	lncRNA	ANTISENSE	ENSG00000236377	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4B_17q11.2	HERV	MER4B	internal	chr17	32902514	32904402	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084809.2	ENSG00000236377	1260	AC084809.1	ENSG00000226377	21444	None	None
HERVP71A_17q11.2a	HERV	HERVP71A	oneside	chr17	32964050	32965535	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM98	ENSG00000006042	18944	SPACA3	ENSG00000141316	4841	None	None
HERVP71A_17q11.2b	HERV	HERVP71A	oneside	chr17	32969771	32974333	+	noncoding	SPACA3	protein_coding	SENSE	ENSG00000141316	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_17q12	HERV	HERVH	prototype	chr17	34183191	34188994	+	noncoding	LINC01989	lncRNA	ANTISENSE	ENSG00000261156	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_17q12a	HERV	ERV316A3	oneside	chr17	34290528	34292439	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCL8	ENSG00000108700	26996	CCL11	ENSG00000172156	2194	None	None
ERV316A3_17q12b	HERV	ERV316A3	oneside	chr17	34298454	34299671	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCL8	ENSG00000108700	19764	CCL11	ENSG00000172156	10120	None	None
ERV316A3_17q12c	HERV	ERV316A3	prototype	chr17	34800439	34804619	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022903.1	ENSG00000264622	33252	AC005552.1	ENSG00000264174	74269	None	None
ERV316A3_17q12d	HERV	ERV316A3	prototype	chr17	35231847	35238245	-	noncoding	AC022916.2	lncRNA	SENSE	ENSG00000266947	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr17:35233023-35233079	None
ERVL_17q12	HERV	ERVL	internal	chr17	35281690	35284875	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLFN5	ENSG00000166750	8035	AC022706.1	ENSG00000267364	28604	None	None
LTR19_17q12	HERV	LTR19	oneside	chr17	35297637	35300844	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLFN5	ENSG00000166750	23982	AC022706.1	ENSG00000267364	12635	None	None
HERV30_17q12	HERV	HERV30	oneside	chr17	35304258	35307396	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLFN5	ENSG00000166750	30603	AC022706.1	ENSG00000267364	6083	None	None
HERVL_17q12a	HERV	HERVL	prototype	chr17	35453456	35456843	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLFN13	ENSG00000154760	4619	AC015911.4	ENSG00000267312	2638	None	None
HERVL74_17q12	HERV	HERVL74	oneside	chr17	35464720	35470123	+	noncoding	SLFN12L,AC015911.8	protein_coding,processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000205045,ENSG00000267554	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr17:35465646-35465973	None
HARLEQUIN_17q12	HERV	HARLEQUIN	prototype	chr17	35500743	35508365	+	noncoding	SLFN12L,AC015911.11,AC015911.3	protein_coding,lncRNA,lncRNA	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000205045,ENSG00000286065,ENSG00000267074	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_17q12	HERV	MER34B	oneside	chr17	35539405	35540411	-	noncoding	AC015911.2	lncRNA	SENSE	ENSG00000267035	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVW_17q12a	HERV	HERVW	oneside	chr17	35551288	35552593	+	coding	SLFN14	protein_coding	ANTISENSE	ENSG00000236320	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_17q12	HERV	HUERSP2	prototype	chr17	36007831	36012588	+	noncoding	AC244100.3,AC244100.4	lncRNA,lncRNA	SENSE,SENSE	ENSG00000275944,ENSG00000278690	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_17q12e	HERV	ERV316A3	internal	chr17	36061399	36063169	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCL23	ENSG00000274736	43427	CCL18	ENSG00000275385	1103	None	None
HERVL_17q12b	HERV	HERVL	prototype	chr17	36111494	36116344	+	noncoding	AC243829.2	lncRNA	SENSE	ENSG00000276241	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr17:36116060-36116065
ERVLB4_17q12	HERV	ERVLB4	internal	chr17	36131939	36132906	+	noncoding	AC243829.2	lncRNA	SENSE	ENSG00000276241	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr17:36132440-36132820	None
ERVLE_17q12	HERV	ERVLE	internal	chr17	36143059	36144653	+	noncoding	AC243829.2	lncRNA	SENSE	ENSG00000276241	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_17q12c	HERV	HERVL	oneside	chr17	36217318	36222486	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCL4L2	ENSG00000276070	4440	AC243829.5	ENSG00000278097	2760	None	None
HERVW_17q12b	HERV	HERVW	oneside	chr17	37332949	37336681	+	noncoding	ACACA	protein_coding	ANTISENSE	ENSG00000278540	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_17q21.1	HERV	ERVLE	internal	chr17	39892447	39893270	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GSDMB	ENSG00000073605	11325	ZPBP2	ENSG00000186075	14551	None	None
ERVLE_17q21.2a	HERV	ERVLE	internal	chr17	41019582	41024430	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRTAP1-5	ENSG00000221852	1596	KRTAP3-1	ENSG00000212901	258	None	None
MER4_17q21.2a	HERV	MER4	oneside	chr17	41087446	41088933	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRTAP4-7	ENSG00000240871	2305	AC100808.1	ENSG00000287602	1405	None	chr17:41088231-41088233
MER4_17q21.2b	HERV	MER4	oneside	chr17	41089014	41095763	+	coding	AC100808.1	lncRNA	SENSE	ENSG00000287602	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_17q21.2c	HERV	MER4	oneside	chr17	41107484	41108937	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRTAP4-9	ENSG00000212722	996	KRTAP4-11	ENSG00000212721	8244	None	chr17:41108244-41108276,chr17:41108217-41108237,chr17:41108373-41108382
MER4_17q21.2d	HERV	MER4	oneside	chr17	41109018	41116054	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRTAP4-9	ENSG00000212722	2530	KRTAP4-11	ENSG00000212721	1127	None	None
ERV316A3_17q21.2	HERV	ERV316A3	oneside	chr17	41172605	41176515	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRTAP4-3	ENSG00000196156	4384	KRTAP4-2	ENSG00000244537	931	None	None
ERVLE_17q21.2b	HERV	ERVLE	internal	chr17	41557971	41561541	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00974	ENSG00000226629	3476	KRT9	ENSG00000171403	4295	None	None
HARLEQUIN_17q21.31	HERV	HARLEQUIN	prototype	chr17	43160246	43167698	-	noncoding	BRCA1,AC060780.1	protein_coding,lncRNA	SENSE,SENSE	ENSG00000012048,ENSG00000267002	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr17:43167341-43167345,chr17:43162946-43162958
HML4_17q21.31	HERV	HML4	mergeable*	chr17	43323118	43351750	-	coding	LINC00910	lncRNA	SENSE	ENSG00000188825	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr17:43350907-43351228	chr17:43351184-43351190,chr17:43349889-43349901,chr17:43323274-43323278
PRIMA41_17q21.31a	HERV	PRIMA41	oneside	chr17	43352269	43353956	-	noncoding	LINC00910	lncRNA	SENSE	ENSG00000188825	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_17q21.31b	HERV	PRIMA41	oneside	chr17	43354075	43360454	-	coding	LINC00910,AC109326.1	lncRNA,TEC	SENSE,SENSE	ENSG00000188825,ENSG00000279602	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr17:43359930-43360930	chr17:43360370-43360379
HML6_17q21.31	HERV	HML6	prototype	chr17	43871997	43874812	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CD300LG	ENSG00000161649	8358	MPP2	ENSG00000108852	545	None	chr17:43872285-43872300
HERVL66_17q21.31	HERV	HERVL66	prototype	chr17	44019062	44023425	-	noncoding	TMEM101	protein_coding	SENSE	ENSG00000091947	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr17:44023213-44023221
ERVLE_17q21.31	HERV	ERVLE	internal	chr17	44292787	44299505	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RUNDC3A-AS1	ENSG00000267750	69	RN7SL507P	ENSG00000239702	1636	None	None
HUERSP2_17q21.31	HERV	HUERSP2	oneside	chr17	44564484	44566500	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091152.3	ENSG00000271222	29846	FZD2	ENSG00000180340	3222	None	None
ERV316A3_17q21.31	HERV	ERV316A3	internal	chr17	45881546	45888812	-	noncoding	MAPT-AS1	lncRNA	SENSE	ENSG00000264589	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_17q21.32	HERV	HERVIP10FH	oneside	chr17	47064835	47068369	-	noncoding	AC005670.3	lncRNA	SENSE	ENSG00000262879	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr17:47066790-47066870	chr17:47067457-47067468,chr17:47067473-47067515,chr17:47067524-47067539
MER41_17q21.32a	HERV	MER41	oneside	chr17	48978283	48979748	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GIP	ENSG00000159224	9687	AC091133.3	ENSG00000250838	15518	None	None
MER41_17q21.32b	HERV	MER41	oneside	chr17	49074208	49077089	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	B4GALNT2P1	ENSG00000248883	8422	IGF2BP1	ENSG00000159217	18063	None	None
ERVLE_17q21.32	HERV	ERVLE	internal	chr17	49090362	49092998	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	B4GALNT2P1	ENSG00000248883	3660	B4GALNT2	ENSG00000167080	39462	None	None
LTR19_17q21.32	HERV	LTR19	prototype	chr17	49121864	49129963	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	B4GALNT2	ENSG00000167080	2497	B4GALNT2P1	ENSG00000248883	35162	None	None
HERVL_17q21.32	HERV	HERVL	oneside	chr17	49144730	49146306	-	noncoding	B4GALNT2	protein_coding	ANTISENSE	ENSG00000167080	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_17q21.32	HERV	HML3	prototype	chr17	49170645	49176690	-	coding	B4GALNT2	protein_coding	ANTISENSE	ENSG00000167080	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_17q21.32	HERV	ERVLB4	internal	chr17	49202488	49204391	+	noncoding	GNGT2	protein_coding	ANTISENSE	ENSG00000167083	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_17q21.32	HERV	ERV316A3	internal	chr17	49273848	49279406	-	noncoding	AC004797.1	lncRNA	ANTISENSE	ENSG00000177369	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_17q21.33a	HERV	ERV316A3	oneside	chr17	50317558	50319950	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM92-AS1	ENSG00000251179	29703	XYLT2	ENSG00000015532	26176	None	None
ERV316A3_17q21.33b	HERV	ERV316A3	internal	chr17	50320107	50323048	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM92-AS1	ENSG00000251179	32252	XYLT2	ENSG00000015532	23078	None	None
ERV316A3_17q21.33c	HERV	ERV316A3	internal	chr17	50324431	50326228	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM92-AS1	ENSG00000251179	36576	XYLT2	ENSG00000015532	19898	None	None
HERVW_17q21.33	HERV	HERVW	prototype	chr17	50399022	50405700	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ACSF2	ENSG00000167107	20458	AC004707.2	ENSG00000253102	1134	None	None
HARLEQUIN_17q21.33	HERV	HARLEQUIN	prototype	chr17	50412688	50420467	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ACSF2	ENSG00000167107	5691	AC004707.2	ENSG00000253102	14800	None	None
MER4_17q21.33a	HERV	MER4	oneside	chr17	51302073	51304944	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UTP18	ENSG00000011260	4137	LINC02071	ENSG00000249383	7665	None	None
MER4_17q21.33b	HERV	MER4	oneside	chr17	51312185	51318326	+	noncoding	LINC02071	lncRNA	ANTISENSE	ENSG00000249383	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER61_17q22a	HERV	MER61	oneside	chr17	52114950	52116699	+	noncoding	CA10	protein_coding	ANTISENSE	ENSG00000154975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_17q22	HERV	LTR25	internal	chr17	52116702	52120550	+	noncoding	CA10	protein_coding	ANTISENSE	ENSG00000154975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_17q22	HERV	MER4B	internal	chr17	52254627	52257546	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CA10	ENSG00000154975	94610	LINC01982	ENSG00000263317	132969	None	None
ERV316A3_17q22a	HERV	ERV316A3	oneside	chr17	52264254	52266117	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01982	ENSG00000263317	124398	CA10	ENSG00000154975	104237	None	None
ERVLB4_17q22a	HERV	ERVLB4	internal	chr17	52446017	52448372	-	noncoding	LINC01982	lncRNA	ANTISENSE	ENSG00000263317	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_17q22a	HERV	ERVLE	prototype	chr17	52469417	52475168	-	noncoding	LINC01982	lncRNA	ANTISENSE	ENSG00000263317	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_17q22a	HERV	HERV9	oneside	chr17	52573719	52581192	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01982	ENSG00000263317	38018	LINC02089	ENSG00000226364	280929	None	None
HERVE_17q22	HERV	HERVE	internal	chr17	52594880	52598607	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01982	ENSG00000263317	59179	LINC02089	ENSG00000226364	263514	None	None
ERVLE_17q22b	HERV	ERVLE	internal	chr17	52704925	52705887	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02089	ENSG00000226364	156234	LINC01982	ENSG00000263317	169224	None	None
MER61_17q22b	HERV	MER61	prototype	chr17	52824467	52828917	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02089	ENSG00000226364	33204	LINC01982	ENSG00000263317	288766	None	chr17:52828749-52828761,chr17:52828770-52828781
MER61_17q22c	HERV	MER61	oneside	chr17	52921799	52924634	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	C17orf112	ENSG00000227011	60879	LINC02089	ENSG00000226364	22211	None	None
MER41_17q22a	HERV	MER41	oneside	chr17	52972371	52974077	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C17orf112	ENSG00000227011	11436	LINC02089	ENSG00000226364	72783	None	None
ERVLB4_17q22b	HERV	ERVLB4	internal	chr17	53246246	53249867	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC034268.2	ENSG00000285939	26893	MTCO1P40	ENSG00000262902	139888	None	None
HUERSP3_17q22	HERV	HUERSP3	oneside	chr17	53628816	53633567	+	noncoding	AC034268.2	lncRNA	ANTISENSE	ENSG00000285939	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_17q22	HERV	LTR57	prototype	chr17	53719200	53723040	-	noncoding	AC034268.2	lncRNA	SENSE	ENSG00000285939	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr17:53722416-53722777	None
MER41_17q22b	HERV	MER41	internal	chr17	53839531	53841476	-	noncoding	AC034268.2	lncRNA	SENSE	ENSG00000285939	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER61_17q22d	HERV	MER61	internal	chr17	53843030	53844758	-	noncoding	AC034268.2	lncRNA	SENSE	ENSG00000285939	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_17q22b	HERV	ERV316A3	oneside	chr17	54277738	54279107	-	noncoding	AC034268.2	lncRNA	SENSE	ENSG00000285939	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_17q22b	HERV	HERV9	oneside	chr17	54286175	54293612	+	noncoding	AC034268.2	lncRNA	ANTISENSE	ENSG00000285939	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_17q22c	HERV	MER41	oneside	chr17	54314459	54316357	-	noncoding	AC034268.2	lncRNA	SENSE	ENSG00000285939	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_17q22d	HERV	MER41	oneside	chr17	54322823	54326728	-	noncoding	AC034268.2	lncRNA	SENSE	ENSG00000285939	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_17q22c	HERV	HERV9	prototype	chr17	54327522	54332778	+	noncoding	AC034268.2	lncRNA	ANTISENSE	ENSG00000285939	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_17q22a	HERV	HERVH	oneside	chr17	54411779	54416802	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC034268.2	ENSG00000285939	46145	ISCA1P3	ENSG00000261965	60994	None	None
HERVL_17q22a	HERV	HERVL	oneside	chr17	54593233	54596389	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC015943.1	ENSG00000288036	12860	ISCA1P3	ENSG00000261965	115065	None	None
HERVL_17q22b	HERV	HERVL	prototype	chr17	54815524	54818434	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP14	ENSG00000251809	44247	TOM1L1	ENSG00000141198	80953	None	None
HERVW_17q22	HERV	HERVW	prototype	chr17	55011525	55018498	-	noncoding	STXBP4	protein_coding	ANTISENSE	ENSG00000166263	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_17q22b	HERV	HERVH	prototype	chr17	55467773	55476512	+	coding	SMIM36	protein_coding	ANTISENSE	ENSG00000261873	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVEA_17q22	HERV	HERVEA	oneside	chr17	55473790	55475092	+	noncoding	SMIM36	protein_coding	ANTISENSE	ENSG00000261873	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_17q22c	HERV	ERV316A3	prototype	chr17	55884008	55886722	+	noncoding	ANKFN1	protein_coding	SENSE	ENSG00000153930	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_17q22	HERV	ERVL	prototype	chr17	56559636	56567714	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANKFN1	ENSG00000153930	47977	RPL39P33	ENSG00000243058	5326	None	None
MER4_17q22	HERV	MER4	oneside	chr17	56925170	56931849	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC015912.3	ENSG00000274213	10637	COIL	ENSG00000121058	6350	None	None
PABLA_17q22	HERV	PABLA	prototype	chr17	56966042	56973150	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	COIL	ENSG00000121058	4992	SCPEP1	ENSG00000121064	4979	None	None
ERVLE_17q22c	HERV	ERVLE	oneside	chr17	57008581	57011984	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SCPEP1	ENSG00000121064	1813	RNF126P1	ENSG00000261192	33494	None	None
MER41_17q22e	HERV	MER41	prototype	chr17	57023979	57028606	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNF126P1	ENSG00000261192	16872	SCPEP1	ENSG00000121064	17211	chr17:57023984-57024317	None
ERV316A3_17q22d	HERV	ERV316A3	prototype	chr17	57817082	57819235	+	noncoding	AC015845.2	lncRNA	ANTISENSE	ENSG00000265542	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_17q22c	HERV	ERVLB4	oneside	chr17	58095792	58097754	-	noncoding	AC015813.6	TEC	ANTISENSE	ENSG00000279207	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_17q23.1	HERV	ERV316A3	prototype	chr17	59503491	59506610	-	noncoding	LINC01476	lncRNA	SENSE	ENSG00000265313	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_17q23.2	HERV	HERVL18	prototype	chr17	60558502	60561264	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011921.2	ENSG00000267678	746	AC011921.1	ENSG00000259349	7704	chr17:60559819-60560147	None
HERVL40_17q23.2	HERV	HERVL40	internal	chr17	60971017	60972258	-	noncoding	BCAS3	protein_coding	ANTISENSE	ENSG00000141376	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_17q23.2a	HERV	ERV316A3	oneside	chr17	62178517	62185522	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC053481.3	ENSG00000266365	45948	POLRMTP1	ENSG00000266066	37878	chr17:62178630-62178892,chr17:62179637-62179772	chr17:62179765-62179772
ERV316A3_17q23.2b	HERV	ERV316A3	oneside	chr17	62186186	62188311	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC053481.3	ENSG00000266365	43159	POLRMTP1	ENSG00000266066	45547	None	None
MER41_17q23.3a	HERV	MER41	internal	chr17	64421422	64424385	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PECAM1	ENSG00000261371	7646	AC234063.2	ENSG00000265031	684	None	None
MER41_17q23.3b	HERV	MER41	prototype	chr17	64424386	64432048	-	noncoding	AC234063.2	miRNA	SENSE	ENSG00000265031	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_17q24.1	HERV	ERVLE	internal	chr17	64714760	64715817	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SMURF2	ENSG00000108854	52453	MICOS10P2	ENSG00000270714	31447	None	None
ERVLB4_17q24.1	HERV	ERVLB4	internal	chr17	65912010	65912609	-	noncoding	CEP112	protein_coding	SENSE	ENSG00000154240	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_17q24.2a	HERV	ERV316A3	internal	chr17	66206755	66208661	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSMD7P1	ENSG00000266707	8517	APOH	ENSG00000091583	3372	None	None
ERVLE_17q24.2a	HERV	ERVLE	internal	chr17	68028400	68030765	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KPNA2	ENSG00000182481	4943	C17orf58	ENSG00000186665	31969	None	None
ERVLE_17q24.2b	HERV	ERVLE	internal	chr17	68080307	68084537	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FBXO36P1	ENSG00000266117	10531	KPNA2	ENSG00000182481	33453	None	chr17:68081752-68081758,chr17:68082260-68082265
HERVFRD_17q24.2	HERV	HERVFRD	oneside	chr17	68490546	68493384	-	noncoding	AC007780.1	lncRNA	ANTISENSE	ENSG00000267009	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr17:68491603-68491671	None
HERVH_17q24.2	HERV	HERVH	prototype	chr17	68795454	68798097	-	noncoding	AC011591.1	lncRNA	SENSE	ENSG00000267250	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_17q24.2b	HERV	ERV316A3	oneside	chr17	68820905	68823230	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011591.1	ENSG00000267250	23083	ABCA8	ENSG00000141338	44059	chr17:68822032-68822175	chr17:68822685-68822694,chr17:68822863-68822883,chr17:68822887-68822896
ERV316A3_17q24.2c	HERV	ERV316A3	internal	chr17	68957131	68958397	+	noncoding	ABCA9-AS1	lncRNA	SENSE	ENSG00000231749	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_17q24.3a	HERV	ERV316A3	oneside	chr17	69237066	69240465	-	noncoding	ABCA10	protein_coding	SENSE	ENSG00000154263	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_17q24.3a	HERV	ERVLE	internal	chr17	69476407	69476987	-	noncoding	MAP2K6	protein_coding	ANTISENSE	ENSG00000108984	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_17q24.3b	HERV	ERV316A3	internal	chr17	69619386	69620049	-	noncoding	LINC01483	lncRNA	ANTISENSE	ENSG00000227517	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_17q24.3c	HERV	ERV316A3	oneside	chr17	69824380	69825641	+	noncoding	LINC01483	lncRNA	SENSE	ENSG00000227517	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_17q24.3d	HERV	ERV316A3	internal	chr17	69825947	69828027	+	noncoding	LINC01483	lncRNA	SENSE	ENSG00000227517	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_17q24.3b	HERV	ERVLE	internal	chr17	70379225	70382952	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005771.1	ENSG00000267471	245965	AC011990.1	ENSG00000267109	10309	None	None
ERV316A3_17q24.3e	HERV	ERV316A3	oneside	chr17	70420703	70422512	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005771.1	ENSG00000267471	206405	AC011990.1	ENSG00000267109	51787	None	None
HERVL18_17q24.3	HERV	HERVL18	prototype	chr17	70668378	70671538	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005771.1	ENSG00000267471	39113	AC007423.1	ENSG00000271239	107066	None	None
HERVL_17q24.3	HERV	HERVL	prototype	chr17	70818885	70823990	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005181.1	ENSG00000271101	188007	AC007423.1	ENSG00000271239	39655	None	None
ERV316A3_17q24.3f	HERV	ERV316A3	internal	chr17	71341967	71343486	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-155P	ENSG00000238759	43749	AC118653.1	ENSG00000225818	252852	None	None
ERV316A3_17q24.3g	HERV	ERV316A3	oneside	chr17	71942539	71948965	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005144.1	ENSG00000283517	70789	ROCR	ENSG00000228639	72886	None	None
ERVLB4_17q24.3	HERV	ERVLB4	internal	chr17	72642784	72644069	+	noncoding	AC080037.2	lncRNA	SENSE	ENSG00000263893	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_17q25.1a	HERV	ERVLE	internal	chr17	74170622	74173400	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02074	ENSG00000266357	16410	RPL38	ENSG00000172809	30182	None	None
HERVH_17q25.1a	HERV	HERVH	oneside	chr17	74503255	74506420	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CD300A	ENSG00000167851	18461	CD300LB	ENSG00000178789	14754	None	None
ERVLB4_17q25.1	HERV	ERVLB4	internal	chr17	74540590	74541302	+	noncoding	CD300C	protein_coding	ANTISENSE	ENSG00000167850	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_17q25.1b	HERV	ERVLE	internal	chr17	74548445	74549130	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CD300C	ENSG00000167850	2330	AC079325.1	ENSG00000236770	269	None	None
HML6_17q25.1	HERV	HML6	oneside	chr17	74584366	74586931	+	noncoding	CD300LD,C17orf77	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000204345,ENSG00000182352	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML1_17q25.1	HERV	HML1	prototype	chr17	75022576	75030520	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPL58	ENSG00000167862	1315	RNU6-362P	ENSG00000252545	577	None	chr17:75025316-75025324
HERVH_17q25.1b	HERV	HERVH	prototype	chr17	75252621	75258281	+	noncoding	GGA3	protein_coding	ANTISENSE	ENSG00000125447	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_17q25.1c	HERV	HERVH	prototype	chr17	76605988	76611511	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC015802.7	ENSG00000286750	6448	AC015802.2	ENSG00000267084	10216	None	None
ERVLE_17q25.3a	HERV	ERVLE	internal	chr17	77983155	77984049	+	noncoding	TNRC6C	protein_coding	SENSE	ENSG00000078687	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_17q25.3	HERV	MER41	prototype	chr17	79011645	79018141	+	noncoding	C1QTNF1-AS1	lncRNA	ANTISENSE	ENSG00000265096	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_17q25.3a	HERV	ERVLB4	internal	chr17	79203936	79206370	+	noncoding	RBFOX3	protein_coding	ANTISENSE	ENSG00000167281	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_17q25.3a	HERV	ERV316A3	oneside	chr17	79901129	79904073	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01979	ENSG00000262585	11179	AC100791.1	ENSG00000262343	51019	None	None
ERV316A3_17q25.3b	HERV	ERV316A3	internal	chr17	79904359	79906563	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01979	ENSG00000262585	8689	AC100791.1	ENSG00000262343	54249	None	None
ERVLB4_17q25.3b	HERV	ERVLB4	internal	chr17	80265360	80268548	+	noncoding	RNF213	protein_coding	SENSE	ENSG00000173821	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_17q25.3a	HERV	HARLEQUIN	oneside	chr17	80397328	80399793	+	noncoding	RNF213,RNF213-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000173821,ENSG00000263069	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr17:80397675-80397680
HERVH_17q25.3	HERV	HERVH	prototype	chr17	80399794	80408186	+	coding	RNF213-AS1	lncRNA	ANTISENSE	ENSG00000263069	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_17q25.3b	HERV	HARLEQUIN	oneside	chr17	80408187	80413516	+	noncoding	RNF213-AS1	lncRNA	ANTISENSE	ENSG00000263069	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_17q25.3b	HERV	ERVLE	internal	chr17	80989236	80990718	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL12P37	ENSG00000240270	12288	CHMP6	ENSG00000176108	880	None	None
HERVK11_17q25.3	HERV	HERVK11	oneside	chr17	82040272	82041783	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RFNG	ENSG00000169733	6119	DCXR-DT	ENSG00000264569	892	None	None
ERVLB4_17q25.3c	HERV	ERVLB4	internal	chr17	83018661	83019256	+	noncoding	B3GNTL1	protein_coding	ANTISENSE	ENSG00000175711	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_18p11.32	HERV	PRIMA41	oneside	chr18	49690	52854	-	noncoding	AP001005.3	lncRNA	SENSE	ENSG00000282965	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_18p11.32a	HERV	ERV316A3	internal	chr18	296526	297725	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000845.1	ENSG00000263884	26248	COLEC12	ENSG00000158270	19012	None	None
ERV316A3_18p11.32b	HERV	ERV316A3	oneside	chr18	583795	586143	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP146	ENSG00000222174	374	CETN1	ENSG00000177143	1681	None	None
MER41_18p11.32	HERV	MER41	oneside	chr18	874031	876030	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000894.3	ENSG00000265671	18405	AP000894.1	ENSG00000264179	16986	None	None
ERVLB4_18p11.32a	HERV	ERVLB4	unknown	chr18	878513	887335	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000894.1	ENSG00000264179	21468	AP000894.3	ENSG00000265671	7100	None	None
ERV316A3_18p11.32c	HERV	ERV316A3	prototype	chr18	1003192	1008109	-	noncoding	AP000829.1	lncRNA	ANTISENSE	ENSG00000263551	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_18p11.32a	HERV	HERVL	prototype	chr18	1329269	1333326	+	noncoding	LINC00470	lncRNA	ANTISENSE	ENSG00000132204	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_18p11.32b	HERV	ERVLB4	oneside	chr18	1498300	1499333	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005262.2	ENSG00000266602	9689	LINC00470	ENSG00000132204	89956	None	None
ERVLB4_18p11.32c	HERV	ERVLB4	oneside	chr18	1831808	1832779	-	noncoding	AP005262.2	lncRNA	ANTISENSE	ENSG00000266602	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_18p11.32b	HERV	HERVL	prototype	chr18	1854634	1861467	-	noncoding	AP005262.2	lncRNA	ANTISENSE	ENSG00000266602	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_18p11.32a	HERV	MER4B	oneside	chr18	1919908	1924269	-	noncoding	AP005262.2,AP005230.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000266602,ENSG00000263745	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18p11.32	HERV	ERVLE	internal	chr18	1933651	1935599	-	noncoding	AP005262.2,AP005230.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000266602,ENSG00000263745	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_18p11.32b	HERV	MER4B	oneside	chr18	2157082	2162924	+	coding	AP005230.1	lncRNA	ANTISENSE	ENSG00000263745	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_18p11.32d	HERV	ERVLB4	prototype	chr18	2469478	2472168	+	noncoding	AP005230.1	lncRNA	ANTISENSE	ENSG00000263745	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_18p11.32d	HERV	ERV316A3	internal	chr18	2625765	2630527	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005061.1	ENSG00000202224	4564	RNU6-340P	ENSG00000200875	19234	chr18:2627904-2628176	None
ERVLB4_18p11.32e	HERV	ERVLB4	oneside	chr18	2820906	2822437	-	noncoding	AP001011.2	lncRNA	SENSE	ENSG00000266049	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_18p11.32c	HERV	HERVL	prototype	chr18	2832568	2839315	-	noncoding	AP001011.2	lncRNA	SENSE	ENSG00000266049	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_18p11.31	HERV	HERVFRD	oneside	chr18	4057062	4062956	+	noncoding	DLGAP1	protein_coding	ANTISENSE	ENSG00000170579	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_18p11.31a	HERV	HERVW	oneside	chr18	4681680	4683913	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005403.1	ENSG00000265545	222222	AP005203.1	ENSG00000266268	91141	None	None
HERVW_18p11.31b	HERV	HERVW	oneside	chr18	4686671	4692409	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005403.1	ENSG00000265545	227213	AP005203.1	ENSG00000266268	82645	None	None
ERV316A3_18p11.31a	HERV	ERV316A3	prototype	chr18	4758365	4762071	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005403.1	ENSG00000265545	298907	AP005203.1	ENSG00000266268	12983	chr18:4760237-4760443	None
ERV316A3_18p11.31b	HERV	ERV316A3	internal	chr18	5018168	5019945	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01892	ENSG00000265514	61226	AP005203.1	ENSG00000266268	13631	None	None
ERVLE_18p11.31a	HERV	ERVLE	oneside	chr18	5336061	5337959	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005671.1	ENSG00000266288	43682	AP001496.1	ENSG00000264254	18397	None	None
ERVLE_18p11.31b	HERV	ERVLE	internal	chr18	5341169	5342401	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001496.1	ENSG00000264254	23505	AP005671.1	ENSG00000266288	39240	None	None
MER41_18p11.31	HERV	MER41	oneside	chr18	5861768	5865635	+	noncoding	MIR3976HG	lncRNA	SENSE	ENSG00000261738	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18p11.31c	HERV	ERVLE	internal	chr18	5876899	5878218	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3976HG	ENSG00000261738	571	TMEM200C	ENSG00000206432	3854	None	None
MER101_18p11.31	HERV	MER101	internal	chr18	6289009	6289913	+	noncoding	L3MBTL4	protein_coding	ANTISENSE	ENSG00000154655	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_18p11.31c	HERV	ERV316A3	oneside	chr18	6475053	6477072	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005202.2	ENSG00000266065	16348	RPL6P27	ENSG00000235552	12038	None	None
ERV316A3_18p11.31d	HERV	ERV316A3	oneside	chr18	6671882	6674742	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005205.3	ENSG00000279479	52311	AP005205.1	ENSG00000261627	29404	None	None
ERVLE_18p11.23	HERV	ERVLE	internal	chr18	7374028	7376134	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001095.1	ENSG00000286126	79710	AP005270.1	ENSG00000212626	72875	None	None
HERVL_18p11.23	HERV	HERVL	oneside	chr18	7535650	7537310	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTPRM	ENSG00000173482	29472	AP001095.1	ENSG00000286126	74515	None	None
HERVFRD_18p11.23	HERV	HERVFRD	prototype	chr18	8177580	8180999	-	noncoding	PTPRM	protein_coding	ANTISENSE	ENSG00000173482	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_18p11.22	HERV	ERVLB4	internal	chr18	8581528	8583649	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAB12	ENSG00000206418	25788	AKR1B1P6	ENSG00000225212	34711	None	None
HERVIP10FH_18p11.22	HERV	HERVIP10FH	prototype	chr18	8876837	8883319	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001531.1	ENSG00000287719	30680	MTCL1	ENSG00000168502	44059	None	None
MER41_18p11.22	HERV	MER41	oneside	chr18	8907608	8910778	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCL1	ENSG00000168502	74830	AP001531.1	ENSG00000287719	3221	None	None
HARLEQUIN_18p11.22a	HERV	HARLEQUIN	prototype	chr18	8913647	8921365	+	noncoding	AP001531.1	lncRNA	SENSE	ENSG00000287719	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr18:8913993-8914006,chr18:8914112-8914147
HERVH_18p11.22	HERV	HERVH	oneside	chr18	9421990	9426214	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005432.2	ENSG00000273335	47207	TWSG1	ENSG00000128791	19570	None	None
ERV316A3_18p11.22a	HERV	ERV316A3	oneside	chr18	9456917	9459157	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005432.2	ENSG00000273335	14264	TWSG1	ENSG00000128791	54497	None	None
ERV316A3_18p11.22b	HERV	ERV316A3	internal	chr18	9904937	9906052	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TXNDC2	ENSG00000168454	15662	AC006238.1	ENSG00000272799	6264	None	None
ERVLE_18p11.22	HERV	ERVLE	internal	chr18	10094867	10096787	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VAPA	ENSG00000101558	134846	AP005271.1	ENSG00000265554	27801	None	None
ERV316A3_18p11.22c	HERV	ERV316A3	oneside	chr18	10147107	10148117	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005209.2	ENSG00000287065	149182	AP005271.1	ENSG00000265554	2701	None	None
HML3_18p11.22	HERV	HML3	prototype	chr18	10219927	10225971	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005209.2	ENSG00000287065	71328	AP005271.1	ENSG00000265554	75521	None	None
HARLEQUIN_18p11.22b	HERV	HARLEQUIN	oneside	chr18	10599605	10604201	-	noncoding	AP001099.1	lncRNA	ANTISENSE	ENSG00000265728	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_18p11.21a	HERV	HERVL	prototype	chr18	11127309	11133941	+	noncoding	PIEZO2	protein_coding	ANTISENSE	ENSG00000154864	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_18p11.21a	HERV	ERVLB4	internal	chr18	11139738	11140659	-	noncoding	PIEZO2	protein_coding	SENSE	ENSG00000154864	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_18p11.21a	HERV	ERV316A3	internal	chr18	11211079	11211755	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005139.1	ENSG00000263682	114515	PIEZO2	ENSG00000154864	62317	None	None
ERVLE_18p11.21a	HERV	ERVLE	internal	chr18	11401383	11402233	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP005229.2	ENSG00000273119	10654	AP001109.1	ENSG00000267564	45523	None	None
ERV316A3_18p11.21b	HERV	ERV316A3	oneside	chr18	11527168	11529434	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01255	ENSG00000267252	4081	AP001017.1	ENSG00000267371	22932	None	None
MER41_18p11.21	HERV	MER41	internal	chr18	11538436	11541243	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01255	ENSG00000267252	15349	AP001017.1	ENSG00000267371	11123	None	None
HERV3_18p11.21	HERV	HERV3	internal	chr18	11544677	11551816	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001017.1	ENSG00000267371	550	LINC01255	ENSG00000267252	21590	None	None
HERVFRD_18p11.21	HERV	HERVFRD	oneside	chr18	11584747	11586576	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001017.1	ENSG00000267371	31900	SLC35G4	ENSG00000236396	23020	None	None
MER101_18p11.21	HERV	MER101	internal	chr18	11641518	11642615	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPIPB1P	ENSG00000257513	1819	AP001120.3	ENSG00000267773	1721	None	None
ERVLB4_18p11.21b	HERV	ERVLB4	internal	chr18	11724413	11725129	-	noncoding	GNAL	protein_coding	ANTISENSE	ENSG00000141404	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_18p11.21c	HERV	ERVLB4	internal	chr18	12567512	12568263	-	noncoding	SPIRE1	protein_coding	SENSE	ENSG00000134278	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_18p11.21b	HERV	HERVL	oneside	chr18	12753988	12759577	-	noncoding	AP005482.2	lncRNA	SENSE	ENSG00000260302	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18p11.21b	HERV	ERVLE	oneside	chr18	12766939	12770774	+	noncoding	AP005482.2	lncRNA	ANTISENSE	ENSG00000260302	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18p11.21c	HERV	ERVLE	internal	chr18	12899143	12901945	+	noncoding	PTPN2	protein_coding	ANTISENSE	ENSG00000175354	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_18p11.21d	HERV	ERVLB4	oneside	chr18	12934879	12940618	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SEH1L	ENSG00000085415	6515	PTPN2	ENSG00000175354	5236	None	None
ERVLB4_18p11.21e	HERV	ERVLB4	oneside	chr18	12940660	12942421	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SEH1L	ENSG00000085415	4712	PTPN2	ENSG00000175354	11017	None	None
ERVLE_18p11.21d	HERV	ERVLE	internal	chr18	13720054	13723317	-	noncoding	FAM210A	protein_coding	SENSE	ENSG00000177150	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_18p11.21	HERV	HERVL40	oneside	chr18	13952664	13954207	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006557.6	ENSG00000279352	55847	AP001086.1	ENSG00000243779	32741	None	None
MER4_18p11.21	HERV	MER4	internal	chr18	14506059	14507004	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POTEC	ENSG00000183206	335	CXADRP3	ENSG00000265766	6781	None	None
HERVIP10F_18p11.21a	HERV	HERVIP10F	oneside	chr18	14616039	14619934	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4K8P	ENSG00000266693	1855	SNX19P3	ENSG00000264570	9898	None	None
ERVLB4_18p11.21f	HERV	ERVLB4	prototype	chr18	15036163	15038414	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005242.2	ENSG00000266522	29811	AP005242.3	ENSG00000278923	18431	None	None
HERVL_18p11.21c	HERV	HERVL	prototype	chr18	15039150	15045695	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005242.2	ENSG00000266522	32798	AP005242.3	ENSG00000278923	11150	None	None
HERVIP10F_18p11.21b	HERV	HERVIP10F	prototype	chr18	15307987	15316600	-	coding	AP005901.1	transcribed_unprocessed_pseudogene	SENSE	ENSG00000215512	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_18p11.21c	HERV	ERV316A3	oneside	chr18	15361001	15363516	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005901.1	ENSG00000215512	30719	ROCK1	ENSG00000067900	5583390	None	None
HUERSP3_18q11.1	HERV	HUERSP3	internal	chr18	21078509	21080065	-	noncoding	ROCK1	protein_coding	SENSE	ENSG00000067900	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_18q11.1	HERV	ERV316A3	prototype	chr18	21190560	21192359	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EXOGP1	ENSG00000263748	7061	AC022809.1	ENSG00000265984	48316	None	None
HERVL40_18q11.2a	HERV	HERVL40	internal	chr18	22751181	22754506	+	noncoding	AC090912.1,AC090912.2	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000265943,ENSG00000266850	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_18q11.2a	HERV	ERV316A3	prototype	chr18	22840781	22843704	+	noncoding	AC090912.1,AC090912.2,RBBP8	lncRNA,lncRNA,protein_coding	ANTISENSE,ANTISENSE,SENSE	ENSG00000265943,ENSG00000266850,ENSG00000101773	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_18q11.2	HERV	HERVH	prototype	chr18	23285010	23290046	+	noncoding	TMEM241	protein_coding	ANTISENSE	ENSG00000134490	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18q11.2a	HERV	ERVLE	prototype	chr18	23799680	23807868	-	noncoding	LAMA3	protein_coding	ANTISENSE	ENSG00000053747	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_18q11.2b	HERV	ERV316A3	internal	chr18	24354815	24355638	-	noncoding	OSBPL1A	protein_coding	SENSE	ENSG00000141447	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_18q11.2c	HERV	ERV316A3	oneside	chr18	24356917	24358507	+	noncoding	OSBPL1A	protein_coding	ANTISENSE	ENSG00000141447	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
MER4B_18q11.2	HERV	MER4B	internal	chr18	24690536	24691983	+	noncoding	LINC01915	lncRNA	SENSE	ENSG00000265485	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_18q11.2b	HERV	HERVL40	oneside	chr18	24747651	24752630	-	noncoding	AC018697.1	lncRNA	ANTISENSE	ENSG00000266573	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_18q11.2	HERV	ERVLB4	unknown	chr18	24771589	24779206	-	noncoding	AC018697.1	lncRNA	ANTISENSE	ENSG00000266573	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_18q11.2d	HERV	ERV316A3	prototype	chr18	25511993	25513522	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF521	ENSG00000198795	159803	RN7SL97P	ENSG00000242216	304712	None	None
ERV316A3_18q11.2e	HERV	ERV316A3	oneside	chr18	25647320	25651583	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL97P	ENSG00000242216	166651	ZNF521	ENSG00000198795	295130	None	None
ERVLE_18q11.2b	HERV	ERVLE	internal	chr18	26160808	26161907	-	noncoding	PSMA8	protein_coding	ANTISENSE	ENSG00000154611	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_18q11.2	HERV	HERV9	oneside	chr18	26231675	26238550	-	coding	TAF4B	protein_coding	ANTISENSE	ENSG00000141384	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_18q11.2f	HERV	ERV316A3	oneside	chr18	26267884	26269507	-	noncoding	TAF4B	protein_coding	ANTISENSE	ENSG00000141384	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18q11.2c	HERV	ERVLE	oneside	chr18	26369428	26373198	+	noncoding	TAF4B	protein_coding	SENSE	ENSG00000141384	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_18q11.2	HERV	HERVL	oneside	chr18	27219443	27221403	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AQP4-AS1	ENSG00000260372	28745	LINC01908	ENSG00000265374	4339	None	None
ERV316A3_18q11.2g	HERV	ERV316A3	oneside	chr18	27254235	27255444	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090403.1	ENSG00000264151	80524	LINC01908	ENSG00000265374	7047	None	None
HERVL40_18q11.2c	HERV	HERVL40	oneside	chr18	27262790	27266446	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01908	ENSG00000265374	15602	AC090403.1	ENSG00000264151	69522	None	None
ERVLE_18q12.1a	HERV	ERVLE	internal	chr18	28203371	28205351	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090365.1	ENSG00000265994	433363	CDH2	ENSG00000170558	26241	None	None
HERVH48_18q12.1	HERV	HERVH48	oneside	chr18	28208841	28212098	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090365.1	ENSG00000265994	426616	CDH2	ENSG00000170558	31711	None	None
ERV316A3_18q12.1a	HERV	ERV316A3	oneside	chr18	28357917	28359076	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDH2	ENSG00000170558	180787	AC090365.1	ENSG00000265994	279638	None	None
MER4B_18q12.1	HERV	MER4B	internal	chr18	28480836	28481246	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090365.1	ENSG00000265994	157468	CDH2	ENSG00000170558	303706	None	None
HERVH_18q12.1a	HERV	HERVH	prototype	chr18	28693027	28698881	-	noncoding	AC090365.1	lncRNA	ANTISENSE	ENSG00000265994	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18q12.1b	HERV	ERVLE	oneside	chr18	29184442	29186109	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105245.1	ENSG00000266479	70708	RNU6-408P	ENSG00000251719	135723	None	None
MER34B_18q12.1	HERV	MER34B	internal	chr18	29202215	29203414	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-408P	ENSG00000251719	153496	AC105245.1	ENSG00000266479	53403	None	None
ERVLE_18q12.1c	HERV	ERVLE	internal	chr18	29243511	29245312	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105245.1	ENSG00000266479	11505	RNU6-408P	ENSG00000251719	194792	None	None
ERV316A3_18q12.1b	HERV	ERV316A3	internal	chr18	29281742	29287425	-	noncoding	AC074237.1	lncRNA	SENSE	ENSG00000265980	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_18q12.1a	HERV	HERVL	oneside	chr18	29296705	29300107	-	noncoding	AC074237.1	lncRNA	SENSE	ENSG00000265980	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_18q12.1	HERV	HERVIP10FH	prototype	chr18	29356350	29362631	-	noncoding	AC074237.1	lncRNA	SENSE	ENSG00000265980	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr18:29361919-29361930,chr18:29361935-29361944,chr18:29362011-29362029
HML5_18q12.1	HERV	HML5	prototype	chr18	29419868	29423960	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117569.1	ENSG00000264587	94299	AC074237.1	ENSG00000265980	57905	None	chr18:29423603-29423622
ERVLE_18q12.1d	HERV	ERVLE	internal	chr18	29488761	29489603	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117569.1	ENSG00000264587	28656	AC074237.1	ENSG00000265980	126798	None	None
ERVLE_18q12.1e	HERV	ERVLE	internal	chr18	29492284	29493741	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117569.1	ENSG00000264587	24518	AC074237.1	ENSG00000265980	130321	None	None
ERVLE_18q12.1f	HERV	ERVLE	internal	chr18	29756372	29757123	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC115100.1	ENSG00000286605	533038	AC117569.2	ENSG00000287803	105932	None	None
MER61_18q12.1a	HERV	MER61	prototype	chr18	29879543	29884639	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC115100.1	ENSG00000286605	405522	AC117569.2	ENSG00000287803	229103	None	None
HUERSP2_18q12.1	HERV	HUERSP2	prototype	chr18	29911868	29915826	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117569.2	ENSG00000287803	261428	AC115100.1	ENSG00000286605	374335	None	None
ERVLB4_18q12.1a	HERV	ERVLB4	oneside	chr18	30396571	30399526	-	noncoding	AC115100.1	lncRNA	ANTISENSE	ENSG00000286605	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18q12.1g	HERV	ERVLE	internal	chr18	30508063	30515813	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090506.1	ENSG00000266196	197462	AC115100.1	ENSG00000286605	93990	None	None
ERVLE_18q12.1h	HERV	ERVLE	internal	chr18	30540183	30541647	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC115100.1	ENSG00000286605	126110	AC090506.1	ENSG00000266196	171628	None	None
ERV316A3_18q12.1c	HERV	ERV316A3	prototype	chr18	30567087	30570067	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC115100.1	ENSG00000286605	153014	AC090506.1	ENSG00000266196	143208	None	None
MER41_18q12.1	HERV	MER41	prototype	chr18	30769491	30774178	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090506.1	ENSG00000266196	55205	AC090506.2	ENSG00000279734	5828	None	None
ERV316A3_18q12.1d	HERV	ERV316A3	internal	chr18	30792657	30793871	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016382.1	ENSG00000265670	160949	AC090506.2	ENSG00000279734	12233	None	None
ERV316A3_18q12.1e	HERV	ERV316A3	internal	chr18	31186778	31187319	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DSC1	ENSG00000134765	23922	DSG1	ENSG00000134760	130841	None	None
HERVH_18q12.1b	HERV	HERVH	prototype	chr18	31284199	31289927	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DSG1	ENSG00000134760	28233	DSC1	ENSG00000134765	121343	None	None
HERVL66_18q12.1	HERV	HERVL66	prototype	chr18	31492660	31497030	+	noncoding	AC021549.2	lncRNA	ANTISENSE	ENSG00000266521	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_18q12.1	HERV	HUERSP3B	oneside	chr18	31741642	31744796	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC25A52	ENSG00000141437	14766	LRRC37A7P	ENSG00000265158	14686	None	None
HERVL_18q12.1b	HERV	HERVL	prototype	chr18	31799037	31800835	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC25A52	ENSG00000141437	38157	TRAPPC8	ENSG00000153339	28345	None	None
HERVH_18q12.1c	HERV	HERVH	prototype	chr18	31803783	31810056	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC25A52	ENSG00000141437	42903	TRAPPC8	ENSG00000153339	19124	None	None
HERVIP10F_18q12.1	HERV	HERVIP10F	prototype	chr18	31974061	31979255	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009831.4	ENSG00000280380	3644	AC009831.2	ENSG00000266105	6516	None	None
HERVH_18q12.1d	HERV	HERVH	prototype	chr18	32000483	32006281	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009831.4	ENSG00000280380	14396	RNF125	ENSG00000101695	12544	None	None
ERVL_18q12.1a	HERV	ERVL	internal	chr18	32502265	32504105	+	noncoding	AC025887.2	lncRNA	SENSE	ENSG00000285095	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_18q12.1f	HERV	ERV316A3	internal	chr18	32504207	32505146	-	noncoding	AC025887.2	lncRNA	ANTISENSE	ENSG00000285095	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18q12.1i	HERV	ERVLE	internal	chr18	32505261	32507097	-	noncoding	AC025887.2	lncRNA	ANTISENSE	ENSG00000285095	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_18q12.1b	HERV	ERVLB4	oneside	chr18	33116812	33121415	+	noncoding	CCDC178	protein_coding	ANTISENSE	ENSG00000166960	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18q12.1j	HERV	ERVLE	prototype	chr18	33186722	33190368	+	noncoding	CCDC178	protein_coding	ANTISENSE	ENSG00000166960	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_18q12.1a	HERV	HERV3	internal	chr18	33311957	33313918	+	noncoding	CCDC178	protein_coding	ANTISENSE	ENSG00000166960	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_18q12.1b	HERV	HERV3	internal	chr18	33314231	33315471	+	noncoding	CCDC178	protein_coding	ANTISENSE	ENSG00000166960	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18q12.1k	HERV	ERVLE	internal	chr18	33454066	33455027	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091198.1	ENSG00000267642	97096	CCDC178	ENSG00000166960	12965	None	None
MER61_18q12.1b	HERV	MER61	prototype	chr18	33560623	33566942	-	noncoding	AC091198.1	lncRNA	SENSE	ENSG00000267642	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr18:33560813-33561004	None
ERVLE_18q12.1l	HERV	ERVLE	internal	chr18	33795616	33798448	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NOL4	ENSG00000101746	52652	ASXL3	ENSG00000141431	44421	None	None
ERVLB4_18q12.1c	HERV	ERVLB4	oneside	chr18	33815751	33818565	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ASXL3	ENSG00000141431	64556	NOL4	ENSG00000101746	32535	None	None
LTR57_18q12.1	HERV	LTR57	internal	chr18	33899879	33901603	+	noncoding	NOL4	protein_coding	ANTISENSE	ENSG00000101746	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_18q12.1b	HERV	ERVL	prototype	chr18	34006254	34008452	+	noncoding	NOL4	protein_coding	ANTISENSE	ENSG00000101746	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18q12.1m	HERV	ERVLE	internal	chr18	34312666	34315397	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DTNA	ENSG00000134769	177893	AC104985.2	ENSG00000278052	86237	None	None
ERVLE_18q12.1n	HERV	ERVLE	internal	chr18	34345807	34347554	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DTNA	ENSG00000134769	145736	AC104985.2	ENSG00000278052	119378	None	None
ERV316A3_18q12.1g	HERV	ERV316A3	prototype	chr18	34442832	34444830	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DTNA	ENSG00000134769	48460	AC104985.2	ENSG00000278052	216403	None	None
HERVL_18q12.1c	HERV	HERVL	oneside	chr18	34732838	34735414	-	noncoding	DTNA	protein_coding	ANTISENSE	ENSG00000134769	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_18q12.2a	HERV	HERVH	prototype	chr18	35216028	35222512	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC015967.1	ENSG00000274400	70611	ZNF397	ENSG00000186812	18518	chr18:35220094-35220200	None
ERVLE_18q12.2a	HERV	ERVLE	internal	chr18	35294063	35296087	-	noncoding	ZNF271P	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000257267	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_18q12.2	HERV	HERVL40	oneside	chr18	35302340	35304455	+	noncoding	ZNF271P	transcribed_unitary_pseudogene	SENSE	ENSG00000257267	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_18q12.2b	HERV	HERVH	prototype	chr18	35356140	35361791	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF396	ENSG00000186496	4903	ZNF24	ENSG00000172466	10658	None	None
ERVLE_18q12.2b	HERV	ERVLE	internal	chr18	35386992	35388405	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007998.1	ENSG00000239683	2967	AC007998.4	ENSG00000275512	15591	None	None
HERVI_18q12.2	HERV	HERVI	prototype	chr18	35832090	35840521	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090229.1	ENSG00000267397	114112	NRBF2P1	ENSG00000267797	1238	chr18:35835866-35836114	chr18:35836080-35836114
HERVH_18q12.2c	HERV	HERVH	prototype	chr18	35844062	35850418	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NRBF2P1	ENSG00000267797	1445	MIR187	ENSG00000207797	54400	None	None
HERVL_18q12.2a	HERV	HERVL	prototype	chr18	35855034	35861544	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NRBF2P1	ENSG00000267797	12417	MIR187	ENSG00000207797	43274	None	None
HUERSP3_18q12.2	HERV	HUERSP3	internal	chr18	35872830	35880365	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NRBF2P1	ENSG00000267797	30213	MIR187	ENSG00000207797	24453	None	None
MER4B_18q12.2	HERV	MER4B	internal	chr18	36150479	36153358	-	noncoding	ELP2	protein_coding	ANTISENSE	ENSG00000134759	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_18q12.2a	HERV	ERVLB4	internal	chr18	37117655	37119209	-	noncoding	KIAA1328	protein_coding	ANTISENSE	ENSG00000150477	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_18q12.2b	HERV	HERVL	unknown	chr18	37875262	37882073	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC009899.1	ENSG00000285940	113131	AC108452.1	ENSG00000286716	78147	None	None
ERVLE_18q12.2c	HERV	ERVLE	internal	chr18	37953179	37953737	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108452.1	ENSG00000286716	6483	AC009899.1	ENSG00000285940	191048	None	None
ERVLE_18q12.2d	HERV	ERVLE	oneside	chr18	37965586	37967634	+	noncoding	AC108452.1	lncRNA	SENSE	ENSG00000286716	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18q12.2e	HERV	ERVLE	internal	chr18	38012690	38014489	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC100781.1	ENSG00000268566	640720	AC108452.1	ENSG00000286716	20277	None	None
ERVLB4_18q12.2b	HERV	ERVLB4	oneside	chr18	38162864	38165816	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC100781.1	ENSG00000268566	489393	AC108452.1	ENSG00000286716	170451	None	None
ERV316A3_18q12.2	HERV	ERV316A3	prototype	chr18	38279023	38280331	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC100781.1	ENSG00000268566	374878	AC108452.1	ENSG00000286716	286610	None	None
ERVLE_18q12.2f	HERV	ERVLE	internal	chr18	38382310	38383530	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC100781.1	ENSG00000268566	271679	AC108452.1	ENSG00000286716	389897	None	None
HERVL_18q12.2c	HERV	HERVL	oneside	chr18	38394176	38396050	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108452.1	ENSG00000286716	401763	AC100781.1	ENSG00000268566	259159	None	None
HERVL_18q12.2d	HERV	HERVL	oneside	chr18	38671289	38673923	+	noncoding	AC100781.1	lncRNA	ANTISENSE	ENSG00000268566	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_18q12.2c	HERV	ERVLB4	oneside	chr18	39061630	39064011	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR924HG	ENSG00000267374	142906	RNU6-706P	ENSG00000253038	27520	None	None
ERVLB4_18q12.2d	HERV	ERVLB4	oneside	chr18	39211356	39214311	-	noncoding	MIR924HG	lncRNA	SENSE	ENSG00000267374	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER61_18q12.3a	HERV	MER61	prototype	chr18	39795158	39800435	-	noncoding	MIR924HG	lncRNA	SENSE	ENSG00000267374	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr18:39800266-39800319
ERV316A3_18q12.3a	HERV	ERV316A3	internal	chr18	39899334	39902259	+	noncoding	LINC01901	lncRNA	ANTISENSE	ENSG00000267413	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_18q12.3a	HERV	ERVLB4	oneside	chr18	39934615	39936712	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01901	ENSG00000267413	9775	AC011266.1	ENSG00000279034	126191	None	None
ERV316A3_18q12.3b	HERV	ERV316A3	internal	chr18	40503578	40504698	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068688.1	ENSG00000286844	256211	AC079052.1	ENSG00000286328	836621	None	None
ERVLE_18q12.3a	HERV	ERVLE	internal	chr18	40560405	40562824	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068688.1	ENSG00000286844	313038	AC079052.1	ENSG00000286328	778495	None	None
ERVLE_18q12.3b	HERV	ERVLE	internal	chr18	42406173	42407605	+	noncoding	LINC00907	lncRNA	SENSE	ENSG00000267586	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18q12.3c	HERV	ERVLE	internal	chr18	42410316	42411787	+	noncoding	LINC00907	lncRNA	SENSE	ENSG00000267586	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_18q12.3a	HERV	HERVH	prototype	chr18	42461841	42469749	+	noncoding	LINC00907	lncRNA	SENSE	ENSG00000267586	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr18:42462701-42462710,chr18:42467534-42467548
HERVH_18q12.3b	HERV	HERVH	prototype	chr18	42552441	42558142	-	noncoding	LINC00907	lncRNA	ANTISENSE	ENSG00000267586	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_18q12.3c	HERV	HERVH	prototype	chr18	42737046	42742345	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00907	ENSG00000267586	45624	RIT2	ENSG00000152214	882	None	None
HERVH_18q12.3d	HERV	HERVH	prototype	chr18	42991497	42996809	+	noncoding	RIT2	protein_coding	ANTISENSE	ENSG00000152214	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_18q12.3b	HERV	MER61	prototype	chr18	43162440	43171130	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC100779.1	ENSG00000287209	33401	SYT4	ENSG00000132872	96762	None	None
HERV4_18q12.3	HERV	HERV4	internal	chr18	43353542	43361433	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SYT4	ENSG00000132872	76007	AC022743.1	ENSG00000278933	137740	None	None
HERVL_18q12.3a	HERV	HERVL	prototype	chr18	43397707	43404584	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022743.1	ENSG00000278933	94589	SYT4	ENSG00000132872	120172	None	None
HERVL18_18q12.3a	HERV	HERVL18	oneside	chr18	43481909	43483268	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SYT4	ENSG00000132872	204374	AC022743.1	ENSG00000278933	15905	None	None
HERVL18_18q12.3b	HERV	HERVL18	prototype	chr18	43484815	43487154	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SYT4	ENSG00000132872	207280	AC022743.1	ENSG00000278933	12019	None	None
HERVL_18q12.3b	HERV	HERVL	prototype	chr18	43494230	43500569	+	noncoding	AC022743.1	TEC	SENSE	ENSG00000278933	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18q12.3d	HERV	ERVLE	internal	chr18	43672036	43672912	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC083760.1	ENSG00000267716	366559	AC022743.1	ENSG00000278933	172200	None	None
ERVL_18q12.3a	HERV	ERVL	internal	chr18	44053712	44055809	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC083760.1	ENSG00000267716	13572	RNA5SP455	ENSG00000202060	15774	None	None
ERVL_18q12.3b	HERV	ERVL	internal	chr18	44058512	44060087	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC083760.1	ENSG00000267716	18372	RNA5SP455	ENSG00000202060	11496	None	None
ERVLE_18q12.3e	HERV	ERVLE	internal	chr18	44208290	44209922	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP455	ENSG00000202060	136589	AC110014.1	ENSG00000285550	5049	None	None
ERVLB4_18q12.3b	HERV	ERVLB4	oneside	chr18	44209923	44214001	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP455	ENSG00000202060	138222	AC110014.1	ENSG00000285550	970	None	None
ERVLE_18q12.3f	HERV	ERVLE	oneside	chr18	44630297	44631176	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC120049.1	ENSG00000267414	45751	LINC01478	ENSG00000267337	50344	None	None
ERVLE_18q12.3g	HERV	ERVLE	internal	chr18	44631724	44635998	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC120049.1	ENSG00000267414	40929	LINC01478	ENSG00000267337	51771	None	None
ERV316A3_18q21.1a	HERV	ERV316A3	oneside	chr18	45977352	45982497	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EPG5	ENSG00000152223	10023	PSTPIP2	ENSG00000152229	1039	None	None
ERV316A3_18q21.1b	HERV	ERV316A3	oneside	chr18	46275058	46278556	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C18orf25	ENSG00000152242	8066	RNF165	ENSG00000141622	48253	None	None
HERVL_18q21.1	HERV	HERVL	prototype	chr18	46777528	46782756	+	noncoding	AC090241.2	lncRNA	SENSE	ENSG00000270112	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVI_18q21.1	HERV	HERVI	prototype	chr18	46868193	46877872	+	noncoding	PIAS2	protein_coding	ANTISENSE	ENSG00000078043	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr18:46871866-46872237,chr18:46877662-46878026	chr18:46868644-46868649,chr18:46868843-46868847,chr18:46868874-46868899,chr18:46875003-46875048
ERVLE_18q21.1a	HERV	ERVLE	internal	chr18	47432549	47434731	+	noncoding	MIR4527HG	lncRNA	SENSE	ENSG00000267761	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_18q21.1a	HERV	MER101	oneside	chr18	47816554	47819208	+	noncoding	SMAD2	protein_coding	ANTISENSE	ENSG00000175387	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
LTR57_18q21.1	HERV	LTR57	internal	chr18	47818630	47820124	+	noncoding	SMAD2	protein_coding	ANTISENSE	ENSG00000175387	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
MER101_18q21.1b	HERV	MER101	oneside	chr18	47820099	47824600	+	noncoding	SMAD2	protein_coding	ANTISENSE	ENSG00000175387	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18q21.1b	HERV	ERVLE	internal	chr18	48459770	48463770	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZBTB7C	ENSG00000184828	49018	RNA5SP456	ENSG00000200872	11717	None	chr18:48460093-48460121
ERVLE_18q21.1c	HERV	ERVLE	internal	chr18	48471097	48472369	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP456	ENSG00000200872	3118	ZBTB7C	ENSG00000184828	60345	None	None
HUERSP3B_18q21.1	HERV	HUERSP3B	prototype	chr18	49447280	49454617	+	noncoding	DYM,AC100778.1,AC100778.4	protein_coding,lncRNA,lncRNA	ANTISENSE,ANTISENSE,SENSE	ENSG00000141627,ENSG00000263895,ENSG00000287518	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_18q21.1	HERV	MER4	unknown	chr18	49525405	49536591	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02837	ENSG00000264464	23545	LIPG	ENSG00000101670	24108	None	None
ERVLE_18q21.1d	HERV	ERVLE	internal	chr18	49538422	49539319	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02837	ENSG00000264464	36562	LIPG	ENSG00000101670	21380	None	None
HERVK11_18q21.1	HERV	HERVK11	prototype	chr18	50220146	50223833	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CFAP53	ENSG00000172361	3360	RN7SL310P	ENSG00000240663	12868	None	None
HERVS71_18q21.1	HERV	HERVS71	prototype	chr18	50400451	50408730	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SKA1	ENSG00000154839	6283	RPLP0P11	ENSG00000239780	49157	None	chr18:50400694-50400711,chr18:50400900-50400905
ERVLE_18q21.1e	HERV	ERVLE	internal	chr18	50445785	50447474	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPLP0P11	ENSG00000239780	10413	SKA1	ENSG00000154839	51617	None	None
MER41_18q21.1	HERV	MER41	oneside	chr18	50543682	50545122	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPLP0P11	ENSG00000239780	84887	MAPK4	ENSG00000141639	14965	None	None
MER61_18q21.2a	HERV	MER61	oneside	chr18	50775309	50779911	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAPK4	ENSG00000141639	43483	MRO	ENSG00000134042	15209	chr18:50775289-50775445	None
HERVL_18q21.2a	HERV	HERVL	prototype	chr18	50999947	51008358	+	noncoding	AC091551.1	protein_coding	SENSE	ENSG00000267699	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr18:51007323-51007324
HERVL_18q21.2b	HERV	HERVL	prototype	chr18	51226695	51233755	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-46P	ENSG00000207154	49978	MEX3C	ENSG00000176624	8391	None	None
ERVLE_18q21.2a	HERV	ERVLE	internal	chr18	51507511	51508034	-	noncoding	LINC01630	lncRNA	ANTISENSE	ENSG00000227115	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_18q21.2	HERV	HERVH	oneside	chr18	51570063	51574789	-	noncoding	LINC01630	lncRNA	ANTISENSE	ENSG00000227115	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18q21.2b	HERV	ERVLE	internal	chr18	51618086	51619268	+	noncoding	LINC01630	lncRNA	SENSE	ENSG00000227115	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_18q21.2	HERV	MER4	prototype	chr18	51629573	51636773	+	noncoding	LINC01630	lncRNA	SENSE	ENSG00000227115	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH48_18q21.2a	HERV	HERVH48	oneside	chr18	51696613	51699891	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027216.1	ENSG00000265712	8404	RPS8P3	ENSG00000215457	145116	None	None
HERVH48_18q21.2b	HERV	HERVH48	oneside	chr18	51706732	51710183	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027216.1	ENSG00000265712	18523	RPS8P3	ENSG00000215457	134824	None	None
ERVLE_18q21.2c	HERV	ERVLE	internal	chr18	51880760	51882083	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016383.3	ENSG00000286283	340995	RPS8P3	ENSG00000215457	35132	None	None
ERVL_18q21.2	HERV	ERVL	oneside	chr18	51908684	51909867	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS8P3	ENSG00000215457	63056	AC016383.3	ENSG00000286283	313211	None	None
PABLB_18q21.2a	HERV	PABLB	internal	chr18	51953473	51954262	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS8P3	ENSG00000215457	107845	AC016383.3	ENSG00000286283	268816	chr18:51953465-51953849	None
PABLB_18q21.2b	HERV	PABLB	internal	chr18	51955445	51960265	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS8P3	ENSG00000215457	109817	AC016383.3	ENSG00000286283	262813	None	None
ERVLE_18q21.2d	HERV	ERVLE	prototype	chr18	52083236	52091303	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS8P3	ENSG00000215457	237608	AC016383.3	ENSG00000286283	131775	None	None
ERVLE_18q21.2e	HERV	ERVLE	oneside	chr18	52181038	52183701	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS8P3	ENSG00000215457	335410	AC016383.3	ENSG00000286283	39377	None	None
HERVL_18q21.2c	HERV	HERVL	internal	chr18	52586354	52588422	-	noncoding	DCC	protein_coding	ANTISENSE	ENSG00000187323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_18q21.2	HERV	HUERSP2	prototype	chr18	52774584	52775967	-	noncoding	DCC	protein_coding	ANTISENSE	ENSG00000187323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_18q21.2a	HERV	HUERSP3B	oneside	chr18	52784756	52789686	-	noncoding	DCC	protein_coding	ANTISENSE	ENSG00000187323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_18q21.2b	HERV	HUERSP3B	oneside	chr18	52790112	52793481	-	noncoding	DCC	protein_coding	ANTISENSE	ENSG00000187323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18q21.2f	HERV	ERVLE	internal	chr18	53076202	53077393	-	noncoding	DCC	protein_coding	ANTISENSE	ENSG00000187323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_18q21.2	HERV	HERVL18	prototype	chr18	53941993	53945012	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090666.1	ENSG00000264296	197121	LINC01919	ENSG00000263438	312003	None	None
MER61_18q21.2b	HERV	MER61	prototype	chr18	54382339	54387923	-	noncoding	C18orf54	protein_coding	ANTISENSE	ENSG00000166845	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_18q21.2	HERV	ERV316A3	internal	chr18	54508232	54509807	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090897.2	ENSG00000283613	83600	AC090897.1	ENSG00000264564	15627	None	None
MER4B_18q21.2a	HERV	MER4B	oneside	chr18	54548372	54553703	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091135.1	ENSG00000267428	9379	AC090897.1	ENSG00000264564	22809	None	None
HML5_18q21.2	HERV	HML5	oneside	chr18	54604823	54607449	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAB27B	ENSG00000041353	110411	DYNAP	ENSG00000178690	5330	None	chr18:54607099-54607113
MER4B_18q21.2b	HERV	MER4B	internal	chr18	54609804	54610841	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DYNAP	ENSG00000178690	10311	RAB27B	ENSG00000041353	107019	None	None
ERVLE_18q21.2g	HERV	ERVLE	oneside	chr18	55212710	55214708	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TCF4	ENSG00000196628	7477	RNA5SP459	ENSG00000252437	66065	None	None
HERVEA_18q21.2	HERV	HERVEA	prototype	chr18	55950396	55957981	+	noncoding	LINC01416,AC009271.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000260930,ENSG00000267327	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18q21.2h	HERV	ERVLE	internal	chr18	56088850	56089747	+	noncoding	AC006305.2,LINC01905,LINC01539	lncRNA,lncRNA,lncRNA	ANTISENSE,SENSE,ANTISENSE	ENSG00000206129,ENSG00000267057,ENSG00000267712	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_18q21.31a	HERV	HERVH	prototype	chr18	56415436	56421341	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006305.2	ENSG00000206129	224174	TXNL1	ENSG00000091164	175868	None	None
HERVH_18q21.31b	HERV	HERVH	prototype	chr18	57064649	57072502	-	noncoding	LINC-ROR	lncRNA	SENSE	ENSG00000258609	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_18q21.31	HERV	ERV316A3	oneside	chr18	57399701	57401876	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ST8SIA3	ENSG00000177511	27970	AC090340.1	ENSG00000277837	25257	None	None
ERVLE_18q21.31	HERV	ERVLE	internal	chr18	57625855	57627778	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NARS1	ENSG00000134440	3642	AC027097.1	ENSG00000267040	2524	None	None
HERVH_18q21.32	HERV	HERVH	prototype	chr18	58641222	58646708	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104971.3	ENSG00000275418	13150	RPL9P31	ENSG00000239659	9102	None	None
ERVLE_18q21.32a	HERV	ERVLE	internal	chr18	59079429	59080033	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC040963.1	ENSG00000267215	1878	OACYLP	ENSG00000224367	10091	None	None
ERVLE_18q21.32b	HERV	ERVLE	internal	chr18	59127695	59131245	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SEC11C	ENSG00000166562	8621	AC040963.1	ENSG00000267215	41775	None	None
ERVLE_18q21.32c	HERV	ERVLE	internal	chr18	59187777	59192081	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRP	ENSG00000134443	28077	SEC11C	ENSG00000166562	28945	None	None
MER61_18q21.32	HERV	MER61	prototype	chr18	59202527	59207935	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SEC11C	ENSG00000166562	43695	GRP	ENSG00000134443	12223	None	None
ERVLB4_18q21.32	HERV	ERVLB4	prototype	chr18	59476749	59478335	+	noncoding	CCBE1	protein_coding	ANTISENSE	ENSG00000183287	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_18q21.32	HERV	HERVL18	prototype	chr18	59558413	59562030	+	noncoding	CCBE1	protein_coding	ANTISENSE	ENSG00000183287	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_18q21.32	HERV	PRIMA41	internal	chr18	59732078	59737922	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS26P54	ENSG00000224161	23636	AC010776.3	ENSG00000273664	31132	None	None
ERV316A3_18q21.32	HERV	ERV316A3	oneside	chr18	60543511	60545006	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010928.1	ENSG00000267382	66767	AC091576.1	ENSG00000285681	3306	None	None
HERVW_18q21.32	HERV	HERVW	oneside	chr18	60710607	60713716	+	noncoding	AC113137.1	lncRNA	ANTISENSE	ENSG00000267098	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_18q21.33	HERV	LTR19	prototype	chr18	61618776	61625061	+	noncoding	AC105094.2	lncRNA	ANTISENSE	ENSG00000267175	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_18q21.33	HERV	PRIMA41	prototype	chr18	61707023	61715310	+	noncoding	AC105094.2	lncRNA	ANTISENSE	ENSG00000267175	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_18q21.33	HERV	MER41	oneside	chr18	62863503	62865015	-	noncoding	PHLPP1	protein_coding	ANTISENSE	ENSG00000081913	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18q21.33	HERV	ERVLE	internal	chr18	63383992	63385494	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VPS4B	ENSG00000119541	3696	AC036176.1	ENSG00000267390	2363	None	None
MER101_18q21.33a	HERV	MER101	oneside	chr18	63520831	63524749	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERPINB12	ENSG00000166634	31411	SERPINB5	ENSG00000206075	15746	None	None
MER101_18q21.33b	HERV	MER101	internal	chr18	63525049	63526319	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERPINB12	ENSG00000166634	29841	SERPINB5	ENSG00000206075	19964	None	None
MER101_18q21.33c	HERV	MER101	oneside	chr18	63526469	63529522	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERPINB12	ENSG00000166634	26638	SERPINB5	ENSG00000206075	21384	None	None
ERV316A3_18q22.1a	HERV	ERV316A3	internal	chr18	64189883	64192337	-	noncoding	LINC01924,LINC01538	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000267134,ENSG00000266952	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18q22.1a	HERV	ERVLE	internal	chr18	64236372	64237163	-	noncoding	LINC01924,LINC01538	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000267134,ENSG00000266952	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_18q22.1b	HERV	ERV316A3	internal	chr18	64466951	64470786	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01924	ENSG00000267134	43350	AC027506.1	ENSG00000275448	207010	None	None
HERVL_18q22.1a	HERV	HERVL	prototype	chr18	64529802	64536937	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027506.1	ENSG00000275448	140859	LINC01924	ENSG00000267134	106201	None	None
HERVL40_18q22.1a	HERV	HERVL40	oneside	chr18	64617970	64622678	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027506.1	ENSG00000275448	55118	LINC01924	ENSG00000267134	194369	None	None
HERVH_18q22.1	HERV	HERVH	prototype	chr18	64681731	64687323	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027506.1	ENSG00000275448	3738	AC090348.1	ENSG00000286800	184941	None	None
ERVLB4_18q22.1a	HERV	ERVLB4	oneside	chr18	64734332	64738049	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027506.1	ENSG00000275448	56339	AC090348.1	ENSG00000286800	134215	None	None
HUERSP3_18q22.1	HERV	HUERSP3	oneside	chr18	64812747	64816172	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027506.1	ENSG00000275448	134754	AC090348.1	ENSG00000286800	56092	None	chr18:64813157-64813160
ERV316A3_18q22.1c	HERV	ERV316A3	internal	chr18	64830307	64832376	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090348.1	ENSG00000286800	39888	AC027506.1	ENSG00000275448	152314	None	None
ERV316A3_18q22.1d	HERV	ERV316A3	oneside	chr18	65125014	65126258	-	noncoding	AC007948.1	lncRNA	SENSE	ENSG00000263863	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18q22.1b	HERV	ERVLE	internal	chr18	65139914	65142862	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007631.1	ENSG00000264131	43297	AC007948.1	ENSG00000263863	14204	None	None
ERVLE_18q22.1c	HERV	ERVLE	internal	chr18	65264261	65265396	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01916	ENSG00000264232	158562	AC007631.1	ENSG00000264131	77243	None	None
ERVL_18q22.1a	HERV	ERVL	oneside	chr18	65274602	65275820	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007631.1	ENSG00000264131	87584	LINC01916	ENSG00000264232	148138	None	None
ERV316A3_18q22.1e	HERV	ERV316A3	oneside	chr18	65325400	65327255	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01916	ENSG00000264232	96703	AC007631.1	ENSG00000264131	138382	None	None
HERVL40_18q22.1b	HERV	HERVL40	internal	chr18	65362187	65363529	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01916	ENSG00000264232	60429	AC007631.1	ENSG00000264131	175169	None	None
ERV316A3_18q22.1f	HERV	ERV316A3	oneside	chr18	65363823	65365319	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01916	ENSG00000264232	58639	AC007631.1	ENSG00000264131	176805	None	None
ERV316A3_18q22.1g	HERV	ERV316A3	internal	chr18	65365971	65368048	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01916	ENSG00000264232	55910	AC007631.1	ENSG00000264131	178953	None	None
ERVLE_18q22.1d	HERV	ERVLE	internal	chr18	65626497	65630935	+	noncoding	AC090358.1	lncRNA	SENSE	ENSG00000265217	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_18q22.1h	HERV	ERV316A3	oneside	chr18	65698231	65700560	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDH7	ENSG00000081138	49692	AC090358.1	ENSG00000265217	46178	None	None
ERVL_18q22.1b	HERV	ERVL	oneside	chr18	66025413	66027449	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRPF19P1	ENSG00000264685	41301	AC023394.1	ENSG00000263622	104471	None	None
ERV316A3_18q22.1i	HERV	ERV316A3	oneside	chr18	66086511	66087985	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRPF19P1	ENSG00000264685	16864	CDH19	ENSG00000071991	413098	None	None
ERVLE_18q22.1e	HERV	ERVLE	oneside	chr18	66127868	66129754	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRPF19P1	ENSG00000264685	58221	CDH19	ENSG00000071991	371329	None	None
ERVL_18q22.1c	HERV	ERVL	unknown	chr18	66130375	66131842	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRPF19P1	ENSG00000264685	60728	CDH19	ENSG00000071991	369241	None	None
ERV316A3_18q22.1j	HERV	ERV316A3	internal	chr18	66132832	66134214	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRPF19P1	ENSG00000264685	63185	CDH19	ENSG00000071991	366869	None	None
ERVLB4_18q22.1b	HERV	ERVLB4	internal	chr18	66168724	66171609	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDH19	ENSG00000071991	329474	PRPF19P1	ENSG00000264685	99077	None	None
ERVLB4_18q22.1c	HERV	ERVLB4	prototype	chr18	66231725	66237745	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRPF19P1	ENSG00000264685	162078	CDH19	ENSG00000071991	263338	None	None
ERV316A3_18q22.1k	HERV	ERV316A3	oneside	chr18	66249514	66252963	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDH19	ENSG00000071991	248120	PRPF19P1	ENSG00000264685	179867	None	None
HERVL_18q22.1b	HERV	HERVL	oneside	chr18	66371739	66377704	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRPF19P1	ENSG00000264685	302092	CDH19	ENSG00000071991	123379	None	None
ERVLB4_18q22.1d	HERV	ERVLB4	oneside	chr18	66448717	66450143	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDH19	ENSG00000071991	50940	PRPF19P1	ENSG00000264685	379070	None	None
ERVLB4_18q22.1e	HERV	ERVLB4	internal	chr18	66450239	66455294	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDH19	ENSG00000071991	45789	PRPF19P1	ENSG00000264685	380592	None	None
MER41_18q22.1a	HERV	MER41	internal	chr18	66686731	66688380	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDH19	ENSG00000071991	82593	RNU6-1037P	ENSG00000238680	257736	None	None
MER41_18q22.1b	HERV	MER41	internal	chr18	66688675	66692387	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDH19	ENSG00000071991	84537	RNU6-1037P	ENSG00000238680	253729	None	None
MER4B_18q22.1a	HERV	MER4B	oneside	chr18	66886349	66892354	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1037P	ENSG00000238680	53762	CDH19	ENSG00000071991	282211	None	None
MER4B_18q22.1b	HERV	MER4B	oneside	chr18	66892669	66894360	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1037P	ENSG00000238680	51756	CDH19	ENSG00000071991	288531	None	None
ERVLB4_18q22.1f	HERV	ERVLB4	internal	chr18	66900962	66903062	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1037P	ENSG00000238680	43054	CDH19	ENSG00000071991	296824	None	None
HERVL40_18q22.1c	HERV	HERVL40	oneside	chr18	66991379	66995081	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1037P	ENSG00000238680	45157	MIR5011	ENSG00000263354	86503	None	None
HERVL18_18q22.1	HERV	HERVL18	oneside	chr18	67298121	67301059	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL31P9	ENSG00000264054	160370	AC091042.1	ENSG00000265936	74074	None	None
PABLB_18q22.1	HERV	PABLB	internal	chr18	67333336	67336864	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL31P9	ENSG00000264054	195585	AC091042.1	ENSG00000265936	38269	None	None
HERVL40_18q22.1d	HERV	HERVL40	oneside	chr18	67425730	67427733	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091042.1	ENSG00000265936	50425	AC110597.1	ENSG00000260578	54058	None	None
ERVL_18q22.1d	HERV	ERVL	internal	chr18	68232715	68234611	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005909.2	ENSG00000287907	2489	AC068112.1	ENSG00000264869	117837	None	None
ERV316A3_18q22.1l	HERV	ERV316A3	oneside	chr18	68309059	68312630	-	noncoding	AC005909.2	lncRNA	SENSE	ENSG00000287907	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_18q22.1c	HERV	MER41	internal	chr18	68359496	68362525	+	noncoding	AC005909.2	lncRNA	ANTISENSE	ENSG00000287907	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_18q22.1m	HERV	ERV316A3	oneside	chr18	68446744	68450909	-	noncoding	AC005909.2	lncRNA	SENSE	ENSG00000287907	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_18q22.1n	HERV	ERV316A3	internal	chr18	68558277	68560715	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC067819.1	ENSG00000264697	30154	TMX3	ENSG00000166479	112973	None	None
ERVLE_18q22.1f	HERV	ERVLE	prototype	chr18	68656500	68664413	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC067819.1	ENSG00000264697	128377	TMX3	ENSG00000166479	9275	None	None
ERV316A3_18q22.1o	HERV	ERV316A3	oneside	chr18	68737017	68739972	-	noncoding	CCDC102B	protein_coding	ANTISENSE	ENSG00000150636	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_18q22.1e	HERV	HERVL40	internal	chr18	68921962	68922547	-	noncoding	CCDC102B	protein_coding	ANTISENSE	ENSG00000150636	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_18q22.2	HERV	ERVLB4	internal	chr18	69339605	69340650	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090337.2	ENSG00000285748	88824	AC026585.1	ENSG00000278532	58076	None	None
ERVLE_18q22.2a	HERV	ERVLE	internal	chr18	69635720	69636604	+	noncoding	DOK6	protein_coding	SENSE	ENSG00000206052	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_18q22.2a	HERV	HERVL	prototype	chr18	69972817	69978822	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RTTN	ENSG00000176225	24209	CD226	ENSG00000150637	11014	None	None
ERVL_18q22.2	HERV	ERVL	internal	chr18	70619884	70620626	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GTSCR1	ENSG00000263417	9908	AC091646.1	ENSG00000286642	65784	None	None
HERVL_18q22.2b	HERV	HERVL	internal	chr18	70891022	70891600	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090415.2	ENSG00000265781	108877	GTSCR1	ENSG00000263417	240278	None	None
ERVLE_18q22.2b	HERV	ERVLE	internal	chr18	70982230	70984417	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GTSCR1	ENSG00000263417	331486	AC090415.2	ENSG00000265781	16060	None	None
ERVLE_18q22.3a	HERV	ERVLE	internal	chr18	71021775	71026989	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090415.2	ENSG00000265781	10285	AC090415.1	ENSG00000265639	1781	None	None
ERVLE_18q22.3b	HERV	ERVLE	prototype	chr18	71199087	71201446	-	noncoding	AC091691.3	lncRNA	ANTISENSE	ENSG00000287693	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18q22.3c	HERV	ERVLE	internal	chr18	71493712	71494515	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01541	ENSG00000260676	25447	AC091691.2	ENSG00000265484	256554	None	None
ERVLE_18q22.3d	HERV	ERVLE	internal	chr18	71607569	71608321	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090312.1	ENSG00000264388	18685	AC090312.2	ENSG00000265946	56827	None	None
HERVL_18q22.3a	HERV	HERVL	oneside	chr18	71691677	71692947	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01899	ENSG00000265352	39668	AC090312.2	ENSG00000265946	26152	None	None
HERVL_18q22.3b	HERV	HERVL	oneside	chr18	71763849	71767353	+	noncoding	LINC01899	lncRNA	ANTISENSE	ENSG00000265352	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18q22.3e	HERV	ERVLE	internal	chr18	71786011	71788226	+	noncoding	LINC01899	lncRNA	ANTISENSE	ENSG00000265352	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER101_18q22.3a	HERV	MER101	internal	chr18	71789855	71790578	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027458.1	ENSG00000260457	46461	LINC01899	ENSG00000265352	1727	None	None
LTR57_18q22.3a	HERV	LTR57	internal	chr18	71818647	71819199	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027458.1	ENSG00000260457	17840	LINC01899	ENSG00000265352	30519	None	None
LTR57_18q22.3b	HERV	LTR57	internal	chr18	71819302	71819876	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027458.1	ENSG00000260457	17163	LINC01899	ENSG00000265352	31174	None	None
ERVLE_18q22.3f	HERV	ERVLE	internal	chr18	71960483	71961610	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CBLN2	ENSG00000141668	575070	AC069114.1	ENSG00000265995	15906	None	None
ERVLE_18q22.3g	HERV	ERVLE	internal	chr18	72113517	72115205	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069114.1	ENSG00000265995	168940	CBLN2	ENSG00000141668	421475	None	None
ERVLE_18q22.3h	HERV	ERVLE	internal	chr18	72139711	72142514	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069114.1	ENSG00000265995	195134	CBLN2	ENSG00000141668	394166	None	None
ERV316A3_18q22.3a	HERV	ERV316A3	internal	chr18	72254937	72256025	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069114.1	ENSG00000265995	310360	CBLN2	ENSG00000141668	280655	None	None
ERVLE_18q22.3i	HERV	ERVLE	internal	chr18	72375298	72376381	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069114.1	ENSG00000265995	430721	CBLN2	ENSG00000141668	160299	None	None
ERVLB4_18q22.3	HERV	ERVLB4	prototype	chr18	72388479	72396137	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069114.1	ENSG00000265995	443902	CBLN2	ENSG00000141668	140543	None	None
MER61_18q22.3	HERV	MER61	prototype	chr18	72692108	72698130	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CBLN2	ENSG00000141668	53587	NETO1	ENSG00000166342	44184	None	None
ERV316A3_18q22.3b	HERV	ERV316A3	oneside	chr18	72897666	72899819	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091138.1	ENSG00000263958	16267	LINC02864	ENSG00000263711	251422	None	None
PRIMA41_18q22.3	HERV	PRIMA41	internal	chr18	72926684	72930209	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091138.1	ENSG00000263958	45285	LINC02864	ENSG00000263711	221032	None	None
ERV316A3_18q22.3c	HERV	ERV316A3	internal	chr18	72962798	72964535	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091138.1	ENSG00000263958	81399	LINC02864	ENSG00000263711	186706	None	None
ERV316A3_18q22.3d	HERV	ERV316A3	oneside	chr18	73051587	73053651	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02864	ENSG00000263711	97590	AC091138.1	ENSG00000263958	170188	None	None
HERVH_18q22.3a	HERV	HERVH	prototype	chr18	73324615	73330362	+	noncoding	LINC02582	lncRNA	SENSE	ENSG00000261780	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr18:73325841-73325847
HERVL40_18q22.3	HERV	HERVL40	prototype	chr18	73402364	73407061	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079070.1	ENSG00000265380	304268	LINC02582	ENSG00000261780	52485	None	None
HERVL_18q22.3c	HERV	HERVL	prototype	chr18	73515234	73516948	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02582	ENSG00000261780	165355	AC079070.1	ENSG00000265380	194381	None	None
HERVL_18q22.3d	HERV	HERVL	internal	chr18	73613758	73616756	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079070.1	ENSG00000265380	94573	LINC02582	ENSG00000261780	263879	None	None
HERVL_18q22.3e	HERV	HERVL	internal	chr18	73831581	73833353	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090125.1	ENSG00000263655	81052	RN7SL401P	ENSG00000241866	86349	None	None
ERV316A3_18q22.3e	HERV	ERV316A3	oneside	chr18	74149836	74153074	-	noncoding	TIMM21	protein_coding	ANTISENSE	ENSG00000075336	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr18:74151886-74152132	chr18:74151886-74151893
ERVLE_18q22.3j	HERV	ERVLE	internal	chr18	74213725	74214757	-	noncoding	AC090398.1	lncRNA	SENSE	ENSG00000260569	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_18q22.3b	HERV	HERVH	prototype	chr18	74293089	74299036	+	noncoding	AC090398.2	lncRNA	SENSE	ENSG00000286529	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER101_18q22.3b	HERV	MER101	internal	chr18	74300764	74303204	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090398.2	ENSG00000286529	2102	C18orf63	ENSG00000206043	12635	None	None
HERVL_18q23	HERV	HERVL	prototype	chr18	75838188	75842897	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01898	ENSG00000261194	125337	AC021506.1	ENSG00000266460	2028	None	None
MER101_18q23a	HERV	MER101	oneside	chr18	76176659	76180987	-	noncoding	AC103808.6	lncRNA	SENSE	ENSG00000266743	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER101_18q23b	HERV	MER101	oneside	chr18	76181295	76184384	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01893	ENSG00000264260	25038	AC103808.6	ENSG00000266743	3557	None	None
LTR57_18q23	HERV	LTR57	internal	chr18	76181619	76182615	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01893	ENSG00000264260	26807	AC103808.6	ENSG00000266743	3881	None	None
HUERSP1_18q23	HERV	HUERSP1	oneside	chr18	76730652	76733362	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCND3P2	ENSG00000265836	17943	ARL2BPP1	ENSG00000265934	26398	None	None
MER101_18q23c	HERV	MER101	internal	chr18	76744136	76745533	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCND3P2	ENSG00000265836	5772	ARL2BPP1	ENSG00000265934	39882	None	None
ERV316A3_18q23	HERV	ERV316A3	internal	chr18	77571425	77572220	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC124254.2	ENSG00000264015	10381	AC123786.1	ENSG00000264693	50332	None	None
ERVLE_18q23	HERV	ERVLE	oneside	chr18	79053713	79056976	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATP9B	ENSG00000166377	12309	SALL3	ENSG00000256463	51036	None	None
MER101_18q23d	HERV	MER101	oneside	chr18	79664584	79669115	+	noncoding	AC068473.1	lncRNA	ANTISENSE	ENSG00000178412	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_18q23a	HERV	PRIMA4	oneside	chr18	79992495	79999727	+	noncoding	TXNL4A	protein_coding	ANTISENSE	ENSG00000141759	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_18q23	HERV	HUERSP3	internal	chr18	80010909	80012828	-	noncoding	TXNL4A	protein_coding	SENSE	ENSG00000141759	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_18q23	HERV	LTR25	internal	chr18	80020191	80023821	-	noncoding	TXNL4A	protein_coding	SENSE	ENSG00000141759	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_18q23b	HERV	PRIMA4	prototype	chr18	80023832	80033162	+	coding	TXNL4A	protein_coding	ANTISENSE	ENSG00000141759	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PABLA_18q23	HERV	PABLA	internal	chr18	80060215	80064591	-	noncoding	AC090360.1,RBFADN	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000267127,ENSG00000261126	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_19p13.3	HERV	ERV316A3	oneside	chr19	82342	83884	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4G3P	ENSG00000282137	10178	FAM138F	ENSG00000282591	4656	None	None
HML2_19p13.3	HERV	HML2	oneside	chr19	385095	387637	+	noncoding	AC010641.2	lncRNA	SENSE	ENSG00000286667	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV3_19p13.3	HERV	HERV3	oneside	chr19	566440	568668	-	noncoding	AC009005.1	lncRNA	SENSE	ENSG00000267751	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV9_19p13.3	HERV	HERV9	prototype	chr19	5158087	5165784	-	noncoding	PTPRS	protein_coding	SENSE	ENSG00000105426	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_19p13.3a	HERV	HERVH	prototype	chr19	5548576	5553212	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNRF4	ENSG00000105428	91720	TINCR	ENSG00000223573	4955	None	chr19:5551290-5551321
HERVH_19p13.3b	HERV	HERVH	prototype	chr19	5847389	5850207	+	noncoding	FUT3,AC024592.2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000171124,ENSG00000267709	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_19p13.3c	HERV	HERVH	prototype	chr19	5851940	5857653	+	noncoding	AC024592.2	lncRNA	SENSE	ENSG00000267709	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
LTR25_19p13.3	HERV	LTR25	internal	chr19	6293022	6296211	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MLLT1	ENSG00000130382	13047	ACER1	ENSG00000167769	9931	None	None
MER4B_19p13.3	HERV	MER4B	internal	chr19	6566474	6567665	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CLIC4P2	ENSG00000269546	2626	AC010503.1	ENSG00000199223	5291	None	None
HERVH_19p13.3d	HERV	HERVH	oneside	chr19	6574614	6577300	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010503.1	ENSG00000199223	1557	CD70	ENSG00000125726	5883	None	None
HERVEA_19p13.3	HERV	HERVEA	prototype	chr19	6597048	6602002	+	noncoding	CD70	protein_coding	ANTISENSE	ENSG00000125726	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr19:6599992-6600280,chr19:6601510-6601852	chr19:6600808-6600820
HARLEQUIN_19p13.3	HERV	HARLEQUIN	oneside	chr19	6597048	6599985	+	coding	CD70	protein_coding	ANTISENSE	ENSG00000125726	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_19p13.3	HERV	ERVLB4	prototype	chr19	6646056	6647473	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CD70	ENSG00000125726	41953	TNFSF14	ENSG00000125735	13780	None	None
HERVS71_19p13.3	HERV	HERVS71	prototype	chr19	6656135	6661723	-	noncoding	TNFSF14	protein_coding	SENSE	ENSG00000125735	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr19:6660377-6660659	chr19:6661442-6661448,chr19:6661318-6661322
HML6_19p13.2a	HERV	HML6	prototype	chr19	7779737	7781930	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CLEC4M	ENSG00000104938	10132	CLEC4GP1	ENSG00000268297	5619	None	chr19:7780049-7780056
HERVK14C_19p13.2	HERV	HERVK14C	oneside	chr19	7793643	7796044	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	EXOSC3P2	ENSG00000269763	17571	CLEC4GP1	ENSG00000268297	3022	None	None
HERVKC4_19p13.2	HERV	HERVKC4	internal	chr19	7796061	7801046	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	EXOSC3P2	ENSG00000269763	12569	CLEC4GP1	ENSG00000268297	5440	None	chr19:7796589-7796605,chr19:7796609-7796614
LTR19_19p13.2a	HERV	LTR19	oneside	chr19	8033232	8035812	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCL25	ENSG00000131142	16955	AC008946.1	ENSG00000267939	17207	None	None
HERV9_19p13.2	HERV	HERV9	oneside	chr19	9314080	9320919	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF559	ENSG00000188321	2853	ZNF699	ENSG00000196110	4242	None	None
HERVH_19p13.2a	HERV	HERVH	internal	chr19	9364148	9366007	-	noncoding	ZNF559-ZNF177,ZNF177	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000270011,ENSG00000188629	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_19p13.2a	HERV	ERVLE	internal	chr19	9422696	9424849	+	noncoding	ZNF266	protein_coding	ANTISENSE	ENSG00000174652	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_19p13.2a	HERV	HERVL74	internal	chr19	9426684	9430559	+	noncoding	ZNF266	protein_coding	ANTISENSE	ENSG00000174652	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_19p13.2a	HERV	HML3	prototype	chr19	9453904	9462598	+	coding	AC011451.4	lncRNA	SENSE	ENSG00000287275	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_19p13.2	HERV	HERVL40	internal	chr19	9463342	9464637	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF560	ENSG00000198028	1718	AC011451.4	ENSG00000287275	954	None	None
ERVLE_19p13.2b	HERV	ERVLE	internal	chr19	9487877	9493848	+	noncoding	ZNF560	protein_coding	ANTISENSE	ENSG00000198028	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_19p13.2b	HERV	HML6	prototype	chr19	9508031	9515060	-	noncoding	AC008567.2,AC008567.3	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000267273,ENSG00000287960	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_19p13.2b	HERV	HERVH	prototype	chr19	9539343	9550570	+	noncoding	ZNF426-DT	lncRNA	SENSE	ENSG00000278611	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr19:9548740-9548748
ERVLE_19p13.2c	HERV	ERVLE	internal	chr19	9570284	9571752	+	noncoding	ZNF121	protein_coding	ANTISENSE	ENSG00000197961	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_19p13.2a	HERV	HERVIP10F	prototype	chr19	9587772	9597349	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF561	ENSG00000171469	7331	ZNF121	ENSG00000197961	3239	None	None
HERVH_19p13.2c	HERV	HERVH	prototype	chr19	9635997	9642215	-	coding	ZNF561-AS1,ZNF562	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000267106,ENSG00000171466	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr19:9638149-9638495	None
ERVLE_19p13.2d	HERV	ERVLE	internal	chr19	9671526	9671970	+	noncoding	ZNF562	protein_coding	ANTISENSE	ENSG00000171466	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_19p13.2	HERV	HARLEQUIN	oneside	chr19	9703073	9708483	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF812P	ENSG00000224689	2297	AC008759.3	ENSG00000277587	13420	None	None
HML3_19p13.2b	HERV	HML3	prototype	chr19	9711509	9717966	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008759.3	ENSG00000277587	3937	ZNF812P	ENSG00000224689	10733	None	None
HERVIP10F_19p13.2b	HERV	HERVIP10F	oneside	chr19	9718757	9722354	+	noncoding	AC008759.3	lncRNA	SENSE	ENSG00000277587	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVEA_19p13.2	HERV	HERVEA	oneside	chr19	9725353	9730899	-	noncoding	AC008759.2	lncRNA	ANTISENSE	ENSG00000267612	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL74_19p13.2b	HERV	HERVL74	internal	chr19	9737195	9740103	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF846	ENSG00000196605	11890	AC008759.2	ENSG00000267612	5252	None	None
HERVH_19p13.2d	HERV	HERVH	prototype	chr19	9741826	9751972	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008759.2	ENSG00000267612	9883	ZNF846	ENSG00000196605	21	chr19:9745321-9745598	None
HERVH_19p13.2e	HERV	HERVH	prototype	chr19	10028654	10033958	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	C3P1	ENSG00000167798	3845	RDH8	ENSG00000080511	6375	chr19:10028607-10029043	chr19:10028752-10028756,chr19:10031401-10031407,chr19:10031413-10031427,chr19:10031455-10031462,chr19:10031603-10031616
HML6_19p13.2c	HERV	HML6	prototype	chr19	11621351	11627046	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008543.1	ENSG00000197332	12708	ZNF627	ENSG00000198551	2190	None	None
MER101_19p13.2	HERV	MER101	oneside	chr19	11686867	11687964	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008543.1	ENSG00000197332	298	ZNF823	ENSG00000197933	33301	None	None
HML6_19p13.2d	HERV	HML6	prototype	chr19	11853282	11860984	-	noncoding	ZNF439,AC020951.1	protein_coding,TEC	ANTISENSE,ANTISENSE	ENSG00000171291,ENSG00000278897	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVI_19p13.2	HERV	HERVI	oneside	chr19	11880363	11883480	+	noncoding	ZNF439	protein_coding	SENSE	ENSG00000171291	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_19p13.2	HERV	HERVIP10FH	oneside	chr19	11883491	11886834	+	noncoding	ZNF439	protein_coding	SENSE	ENSG00000171291	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVE_19p13.2	HERV	HERVE	oneside	chr19	11942460	11946832	-	noncoding	ZNF700,AC008770.2,AC008770.3	protein_coding,protein_coding,lncRNA	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000196757,ENSG00000267179,ENSG00000267274	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_19p13.2c	HERV	HML3	prototype	chr19	12022006	12027814	+	noncoding	ZNF433-AS1,AC008770.4,ZNF433,AC008770.1	lncRNA,protein_coding,protein_coding,protein_coding	SENSE,SENSE,ANTISENSE,ANTISENSE	ENSG00000219665,ENSG00000286098,ENSG00000197647,ENSG00000257355	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_19p13.2d	HERV	HML3	oneside	chr19	12098326	12102949	-	noncoding	AC022415.3,ZNF788P,ZNF20	protein_coding,transcribed_unprocessed_pseudogene,protein_coding	ANTISENSE,ANTISENSE,SENSE	ENSG00000286132,ENSG00000214189,ENSG00000132010	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_19p13.2e	HERV	HML3	oneside	chr19	12103011	12104292	-	noncoding	AC022415.3,ZNF788P,ZNF20	protein_coding,transcribed_unprocessed_pseudogene,protein_coding	ANTISENSE,ANTISENSE,SENSE	ENSG00000286132,ENSG00000214189,ENSG00000132010	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_19p13.2b	HERV	LTR19	oneside	chr19	12224330	12228688	-	noncoding	AC012618.3,ZNF44	transcribed_unprocessed_pseudogene,protein_coding	ANTISENSE,SENSE	ENSG00000234773,ENSG00000197857	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
LTR19_19p13.2c	HERV	LTR19	oneside	chr19	12228817	12231119	-	noncoding	AC012618.3,ZNF44	transcribed_unprocessed_pseudogene,protein_coding	ANTISENSE,SENSE	ENSG00000234773,ENSG00000197857	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HML1_19p13.2	HERV	HML1	oneside	chr19	12450589	12454543	+	noncoding	AC008758.6,AC008758.2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000269755,ENSG00000234848	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL74_19p13.2c	HERV	HERVL74	internal	chr19	12592915	12594954	-	noncoding	ZNF490	protein_coding	SENSE	ENSG00000188033	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_19p13.2	HERV	PABLA	internal	chr19	12598247	12600836	+	coding	ZNF490	protein_coding	ANTISENSE	ENSG00000188033	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_19p13.12	HERV	LTR57	internal	chr19	15604143	15605745	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AD000091.1	ENSG00000267135	5878	CYP4F23P	ENSG00000269516	19434	None	None
HERVH_19p13.12	HERV	HERVH	oneside	chr19	15828738	15834725	+	noncoding	LINC01764,UCA1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000267308,ENSG00000214049	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr19:15833927-15834063	chr19:15828985-15829004,chr19:15829010-15829025,chr19:15829031-15829050,chr19:15829153-15829171,chr19:15829222-15829235,chr19:15828931-15828941,chr19:15828970-15828981
HERV3_19p13.12	HERV	HERV3	oneside	chr19	15999206	16003857	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00661	ENSG00000205396	11430	CYP4F9P	ENSG00000267392	186	None	None
MER4_19p13.12	HERV	MER4	internal	chr19	16008234	16012267	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYP4F9P	ENSG00000267392	9214	LINC00661	ENSG00000205396	3020	None	None
HERVH_19p13.11	HERV	HERVH	oneside	chr19	17593566	17598095	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010618.1	ENSG00000243771	3495	UNC13A	ENSG00000130477	3233	None	None
MER34B_19p13.11	HERV	MER34B	oneside	chr19	18180092	18184013	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MPV17L2	ENSG00000254858	9205	IFI30	ENSG00000216490	1975	None	chr19:18181124-18181127
HERV30_19p13.11	HERV	HERV30	internal	chr19	18577591	18584685	+	coding	CRLF1	protein_coding	ANTISENSE	ENSG00000006016	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL66_19p13.11a	HERV	HERVL66	internal	chr19	19700556	19701232	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011458.1	ENSG00000270402	7733	AC011458.2	ENSG00000271283	1147	None	None
ERVLB4_19p13.11	HERV	ERVLB4	internal	chr19	19760002	19764818	+	noncoding	LINC00663,AC011477.8,AC011477.3	lncRNA,lncRNA,lncRNA	ANTISENSE,SENSE,ANTISENSE	ENSG00000266904,ENSG00000287533,ENSG00000267581	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_19p13.11	HERV	HERVL40	internal	chr19	19777091	19777702	+	noncoding	AC011477.3,ZNF56	lncRNA,transcribed_unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000267581,ENSG00000267419	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_19p13.11	HERV	HARLEQUIN	oneside	chr19	19781554	19786258	-	noncoding	AC011477.3,ZNF56,ZNF506	lncRNA,transcribed_unprocessed_pseudogene,protein_coding	SENSE,ANTISENSE,SENSE	ENSG00000267581,ENSG00000267419,ENSG00000081665	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr19:19784986-19785076	None
HERVL66_19p13.11b	HERV	HERVL66	oneside	chr19	19823430	19825878	+	noncoding	ZNF56	transcribed_unprocessed_pseudogene	SENSE	ENSG00000267419	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL66_19p13.11c	HERV	HERVL66	oneside	chr19	19862527	19864026	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF253	ENSG00000256771	1856	BNIP3P9	ENSG00000270325	5000	None	None
HERVEA_19p13.11	HERV	HERVEA	oneside	chr19	19895560	19897814	+	noncoding	AC011477.2	lncRNA	ANTISENSE	ENSG00000267565	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_19p13.11	HERV	HERVIP10F	oneside	chr19	19897815	19900640	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011477.2	ENSG00000267565	1968	ZNF93	ENSG00000184635	273	chr19:19900325-19900510	None
HERVFH21_19p12	HERV	HERVFH21	oneside	chr19	19943851	19951066	+	coding	ZNF93	protein_coding	SENSE	ENSG00000184635	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL66_19p12a	HERV	HERVL66	prototype	chr19	19959694	19964935	+	noncoding	ZNF93	protein_coding	SENSE	ENSG00000184635	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL66_19p12b	HERV	HERVL66	prototype	chr19	19990990	19995758	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF682	ENSG00000197124	1300	AC007204.2	ENSG00000274800	11380	None	None
HERVL66_19p12c	HERV	HERVL66	oneside	chr19	20066218	20069544	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BNIP3P13	ENSG00000269154	2898	ZNF90	ENSG00000213988	8450	None	None
HERVL66_19p12d	HERV	HERVL66	prototype	chr19	20072866	20076629	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF90	ENSG00000213988	1365	BNIP3P13	ENSG00000269154	9546	None	None
HERVH_19p12a	HERV	HERVH	prototype	chr19	20087687	20096781	-	noncoding	ZNF90	protein_coding	ANTISENSE	ENSG00000213988	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_19p12a	HERV	HERVW	oneside	chr19	20099536	20101469	+	noncoding	ZNF90	protein_coding	SENSE	ENSG00000213988	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19p12b	HERV	HERVH	oneside	chr19	20154966	20161284	+	noncoding	AC011447.3	lncRNA	ANTISENSE	ENSG00000267383	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL66_19p12e	HERV	HERVL66	internal	chr19	20161342	20163593	+	noncoding	AC011447.3	lncRNA	ANTISENSE	ENSG00000267383	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_19p12	HERV	HERVIP10F	internal	chr19	20205211	20206834	+	noncoding	AC011447.3	lncRNA	ANTISENSE	ENSG00000267383	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL66_19p12f	HERV	HERVL66	oneside	chr19	20239410	20240961	-	noncoding	AC011447.3	lncRNA	SENSE	ENSG00000267383	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVEA_19p12a	HERV	HERVEA	oneside	chr19	20243740	20248488	+	noncoding	AC011447.3	lncRNA	ANTISENSE	ENSG00000267383	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr19:20247552-20247589
HML2_19p12a	HERV	HML2	prototype	chr19	20276591	20286703	+	noncoding	AC011447.3	lncRNA	ANTISENSE	ENSG00000267383	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_19p12a	HERV	HML1	oneside	chr19	20317908	20322352	-	noncoding	AC011447.3	lncRNA	SENSE	ENSG00000267383	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr19:20321304-20321310
HERVIP10FH_19p12a	HERV	HERVIP10FH	oneside	chr19	20359919	20361619	+	noncoding	ZNF826P	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000231205	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVS71_19p12a	HERV	HERVS71	prototype	chr19	20362028	20371994	+	noncoding	ZNF826P	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000231205	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr19:20368100-20368478	chr19:20362470-20362476,chr19:20362545-20362549,chr19:20362566-20362571,chr19:20362580-20362589,chr19:20362595-20362605,chr19:20362620-20362636,chr19:20362639-20362643,chr19:20362697-20362727
HERVIP10FH_19p12b	HERV	HERVIP10FH	oneside	chr19	20372007	20376073	+	noncoding	ZNF826P	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000231205	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_19p12a	HERV	HARLEQUIN	prototype	chr19	20426124	20432598	-	noncoding	AC008554.1	lncRNA	ANTISENSE	ENSG00000269043	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr19:20432225-20432233
HERVL66_19p12g	HERV	HERVL66	prototype	chr19	20432599	20437807	+	noncoding	AC008554.1	lncRNA	SENSE	ENSG00000269043	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL66_19p12h	HERV	HERVL66	oneside	chr19	20440060	20442537	-	noncoding	AC008554.1	lncRNA	ANTISENSE	ENSG00000269043	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL66_19p12i	HERV	HERVL66	oneside	chr19	20469213	20471889	-	noncoding	AC008554.1	lncRNA	ANTISENSE	ENSG00000269043	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr19:20471586-20471601
HERVH48_19p12a	HERV	HERVH48	prototype	chr19	20473970	20480714	-	noncoding	AC008554.1	lncRNA	ANTISENSE	ENSG00000269043	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11_19p12a	HERV	HERVK11	prototype	chr19	20500224	20509728	-	noncoding	AC008554.1	lncRNA	ANTISENSE	ENSG00000269043	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVEA_19p12b	HERV	HERVEA	prototype	chr19	20509937	20518544	-	noncoding	AC008554.1	lncRNA	ANTISENSE	ENSG00000269043	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19p12c	HERV	HERVH	prototype	chr19	20518831	20524470	-	noncoding	AC008554.1	lncRNA	ANTISENSE	ENSG00000269043	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL66_19p12j	HERV	HERVL66	prototype	chr19	20566675	20571306	+	noncoding	AC008554.1,AC010636.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000269043,ENSG00000269110	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV3_19p12a	HERV	HERV3	prototype	chr19	20611051	20618134	+	noncoding	AC010636.2,AC010636.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000269110,ENSG00000268560	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML1_19p12b	HERV	HML1	oneside	chr19	20711178	20713338	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010329.1	ENSG00000268416	33585	AC010329.2	ENSG00000269779	13563	None	None
HERVE_19p12	HERV	HERVE	prototype	chr19	20746820	20755632	-	coding	AC010329.1	lncRNA	SENSE	ENSG00000268416	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr19:20750330-20750346,chr19:20750368-20750375
HERVL66_19p12k	HERV	HERVL66	prototype	chr19	20770618	20775431	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF66	ENSG00000160229	873	VN1R79P	ENSG00000269885	11666	None	None
HERVIP10FH_19p12c	HERV	HERVIP10FH	oneside	chr19	20857639	20862513	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008739.2	ENSG00000269373	10222	ZNF85	ENSG00000105750	60709	None	None
HARLEQUIN_19p12b	HERV	HARLEQUIN	oneside	chr19	21002382	21009375	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008739.1	ENSG00000268326	19172	ZNF430	ENSG00000118620	11259	None	None
PABLA_19p12a	HERV	PABLA	internal	chr19	21086913	21090642	-	noncoding	ZNF714	protein_coding	ANTISENSE	ENSG00000160352	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19p12d	HERV	HERVH	oneside	chr19	21130343	21135256	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF431	ENSG00000196705	6768	ZNF714	ENSG00000160352	5073	None	None
PABLA_19p12b	HERV	PABLA	internal	chr19	21146874	21152853	-	coding	ZNF431,RPL7AP10	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000196705,ENSG00000240522	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr19:21150457-21150458
HML6_19p12a	HERV	HML6	prototype	chr19	21233790	21238065	+	noncoding	AC010620.2	unprocessed_pseudogene	ANTISENSE	ENSG00000269839	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_19p12a	HERV	HML3	prototype	chr19	21338382	21345290	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF738	ENSG00000172687	13640	ZNF708	ENSG00000182141	8957	None	None
MER41_19p12a	HERV	MER41	prototype	chr19	21365058	21367044	-	noncoding	ZNF738	protein_coding	ANTISENSE	ENSG00000172687	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_19p12b	HERV	HML3	oneside	chr19	21412023	21417699	-	coding	ZNF493,AC010615.4	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000196268,ENSG00000269237	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HML3_19p12c	HERV	HML3	oneside	chr19	21417759	21419018	-	noncoding	ZNF493,AC010615.4	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000196268,ENSG00000269237	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_19p12b	HERV	HERV3	prototype	chr19	21430674	21441176	-	coding	AC010615.4	protein_coding	ANTISENSE	ENSG00000269237	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr19:21440660-21440677
MER4_19p12a	HERV	MER4	internal	chr19	21454300	21456510	-	noncoding	AC010615.4,AC010615.2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000269237,ENSG00000268119	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML5_19p12a	HERV	HML5	oneside	chr19	21621638	21627353	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC123912.2	ENSG00000268240	27010	AC123912.5	ENSG00000271182	7480	chr19:21625320-21625527	None
HML6_19p12b	HERV	HML6	oneside	chr19	21627354	21628684	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC123912.2	ENSG00000268240	32726	AC123912.5	ENSG00000271182	6149	chr19:21627459-21627747	None
HERVW_19p12b	HERV	HERVW	prototype	chr19	21629385	21634782	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC123912.2	ENSG00000268240	34757	AC123912.5	ENSG00000271182	51	None	None
HML3_19p12d	HERV	HML3	oneside	chr19	21666568	21672069	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTDHP3	ENSG00000268433	5481	AC123912.3	ENSG00000268278	10268	None	None
HML3_19p12e	HERV	HML3	oneside	chr19	21672129	21673402	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTDHP3	ENSG00000268433	4148	AC123912.3	ENSG00000268278	15829	None	None
HUERSP3_19p12a	HERV	HUERSP3	oneside	chr19	21679909	21684063	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTDHP3	ENSG00000268433	1688	MTDHP4	ENSG00000268535	25459	None	None
HUERSP3_19p12b	HERV	HUERSP3	internal	chr19	21684366	21687992	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTDHP3	ENSG00000268433	6145	MTDHP4	ENSG00000268535	21530	None	None
HERVS71_19p12b	HERV	HERVS71	prototype	chr19	21688200	21697956	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTDHP4	ENSG00000268535	11566	MTDHP3	ENSG00000268433	9979	None	None
MER41_19p12b	HERV	MER41	prototype	chr19	21759476	21763262	+	noncoding	ZNF100	protein_coding	ANTISENSE	ENSG00000197020	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_19p12c	HERV	HML6	oneside	chr19	21786150	21792221	-	noncoding	AC092364.1	lncRNA	SENSE	ENSG00000268184	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_19p12	HERV	ERVLE	internal	chr19	21792238	21794236	-	noncoding	AC092364.1	lncRNA	SENSE	ENSG00000268184	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_19p12e	HERV	HERVH	prototype	chr19	21858084	21863893	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF43	ENSG00000198521	5959	ZNF208	ENSG00000160321	69065	None	chr19:21858400-21858403,chr19:21858468-21858480
HML4_19p12	HERV	HML4	prototype	chr19	21880252	21890542	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF208	ENSG00000160321	42416	ZNF43	ENSG00000198521	28127	None	None
HERVFRD_19p12	HERV	HERVFRD	prototype	chr19	21911650	21913452	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF208	ENSG00000160321	19506	ZNF43	ENSG00000198521	59525	None	None
MER41_19p12c	HERV	MER41	oneside	chr19	21924274	21926892	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF208	ENSG00000160321	6066	ZNF43	ENSG00000198521	72149	None	None
LTR25_19p12a	HERV	LTR25	oneside	chr19	21945796	21951669	+	noncoding	ZNF208	protein_coding	ANTISENSE	ENSG00000160321	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_19p12b	HERV	LTR25	oneside	chr19	21956973	21958924	+	noncoding	ZNF208	protein_coding	ANTISENSE	ENSG00000160321	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_19p12a	HERV	HERVL	oneside	chr19	22020514	22025692	-	noncoding	AC003973.1	lncRNA	SENSE	ENSG00000269504	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_19p12d	HERV	MER41	oneside	chr19	22036672	22039424	+	noncoding	AC003973.1	lncRNA	ANTISENSE	ENSG00000269504	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER61_19p12a	HERV	MER61	internal	chr19	22110276	22114541	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF92P2	ENSG00000269505	14086	ZNF257	ENSG00000197134	18796	None	None
LTR25_19p12c	HERV	LTR25	internal	chr19	22143379	22148364	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTDHP5	ENSG00000269575	2262	VN1R85P	ENSG00000269345	26402	None	None
LTR25_19p12d	HERV	LTR25	internal	chr19	22154510	22155500	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTDHP5	ENSG00000269575	13393	VN1R85P	ENSG00000269345	19266	None	None
LTR25_19p12e	HERV	LTR25	oneside	chr19	22161661	22163244	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTDHP5	ENSG00000269575	20544	VN1R85P	ENSG00000269345	11522	None	None
HML6_19p12d	HERV	HML6	oneside	chr19	22193241	22196548	+	noncoding	ZNF676	protein_coding	ANTISENSE	ENSG00000196109	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_19p12b	HERV	HERVL	oneside	chr19	22233735	22239053	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073539.1	ENSG00000267872	4201	ZNF676	ENSG00000196109	17934	None	None
MER41_19p12e	HERV	MER41	internal	chr19	22247754	22252110	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073539.1	ENSG00000267872	2407	AC073539.3	ENSG00000268597	7583	None	None
HARLEQUIN_19p12c	HERV	HARLEQUIN	prototype	chr19	22268382	22273613	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF729	ENSG00000196350	12828	AC073539.3	ENSG00000268597	7047	None	None
HARLEQUIN_19p12d	HERV	HARLEQUIN	prototype	chr19	22355193	22362588	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011494.1	ENSG00000268685	1	ZNF729	ENSG00000196350	38017	None	None
MER4_19p12b	HERV	MER4	oneside	chr19	22429032	22432142	-	noncoding	ZNF98	protein_coding	SENSE	ENSG00000197360	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_19p12c	HERV	HERV3	internal	chr19	22484604	22488348	-	noncoding	ZNF98	protein_coding	SENSE	ENSG00000197360	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_19p12	HERV	HUERSP2	prototype	chr19	22491805	22496596	+	noncoding	ZNF98	protein_coding	ANTISENSE	ENSG00000197360	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_19p12d	HERV	HERV3	prototype	chr19	22524807	22531806	+	noncoding	ZNF98,AC011467.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000197360,ENSG00000260599	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_19p12f	HERV	HERVH	prototype	chr19	22568270	22575020	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1179P	ENSG00000207397	12903	AC011467.6	ENSG00000271149	20459	None	None
HML2_19p12b	HERV	HML2	prototype	chr19	22575022	22581759	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1179P	ENSG00000207397	19655	AC011467.6	ENSG00000271149	13720	None	None
HERVW_19p12c	HERV	HERVW	prototype	chr19	22745377	22752074	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VN1R87P	ENSG00000268789	1967	ZNF99	ENSG00000213973	109	None	None
HUERSP3_19p12c	HERV	HUERSP3	prototype	chr19	22877975	22882530	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VN1R88P	ENSG00000268541	16381	AC022145.1	ENSG00000268296	20008	None	None
HUERSP3B_19p12	HERV	HUERSP3B	oneside	chr19	22882217	22884662	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	VN1R88P	ENSG00000268541	20623	AC022145.1	ENSG00000268296	17876	None	None
MER41_19p12f	HERV	MER41	oneside	chr19	22920303	22922580	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022145.2	ENSG00000269458	2797	AC022145.1	ENSG00000268296	5963	None	None
LTR25_19p12f	HERV	LTR25	oneside	chr19	22943608	22949508	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022145.2	ENSG00000269458	18061	ZNF728	ENSG00000269067	25375	None	None
LTR25_19p12g	HERV	LTR25	oneside	chr19	22955673	22958652	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022145.2	ENSG00000269458	30126	ZNF728	ENSG00000269067	16231	None	None
HERVL_19p12c	HERV	HERVL	oneside	chr19	23010769	23014691	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01859	ENSG00000261558	368	ZNF728	ENSG00000269067	7593	None	None
HERVH_19p12g	HERV	HERVH	prototype	chr19	23026429	23032231	-	noncoding	LINC01859	lncRNA	SENSE	ENSG00000261558	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER61_19p12b	HERV	MER61	oneside	chr19	23032232	23034513	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01858	ENSG00000261615	12445	LINC01859	ENSG00000261558	414	None	None
MER61_19p12c	HERV	MER61	internal	chr19	23103226	23105106	+	noncoding	ZNF730	protein_coding	SENSE	ENSG00000183850	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_19p12e	HERV	HARLEQUIN	prototype	chr19	23154532	23164276	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092329.2	ENSG00000269471	39734	ZNF730	ENSG00000183850	7311	None	None
LTR19_19p12	HERV	LTR19	oneside	chr19	23169122	23172493	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF730	ENSG00000183850	21901	AC092329.2	ENSG00000269471	31517	None	None
HERVH_19p12h	HERV	HERVH	oneside	chr19	23176980	23179743	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF730	ENSG00000183850	29759	AC092329.2	ENSG00000269471	24267	None	None
HERVS71_19p12c	HERV	HERVS71	prototype	chr19	23179744	23186831	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092329.2	ENSG00000269471	17179	ZNF730	ENSG00000183850	32523	None	None
HERVH_19p12i	HERV	HERVH	internal	chr19	23186832	23188026	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF730	ENSG00000183850	39611	AC092329.2	ENSG00000269471	15984	None	None
HERVH_19p12j	HERV	HERVH	internal	chr19	23188262	23189033	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092329.2	ENSG00000269471	14977	ZNF730	ENSG00000183850	41041	None	None
HERVH48_19p12b	HERV	HERVH48	prototype	chr19	23344732	23350997	+	noncoding	ZNF91	protein_coding	ANTISENSE	ENSG00000167232	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr19:23347807-23347990	None
PRIMA41_19p12a	HERV	PRIMA41	oneside	chr19	23513253	23517731	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF675	ENSG00000197372	7900	ZNF725P	ENSG00000268100	597	None	None
HML5_19p12b	HERV	HML5	prototype	chr19	23525449	23528447	-	noncoding	ZNF675	protein_coding	SENSE	ENSG00000197372	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HML3_19p12f	HERV	HML3	prototype	chr19	23532070	23540666	+	coding	ZNF675	protein_coding	ANTISENSE	ENSG00000197372	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HML5_19p12c	HERV	HML5	oneside	chr19	23547631	23548789	+	noncoding	ZNF675	protein_coding	ANTISENSE	ENSG00000197372	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19p12k	HERV	HERVH	prototype	chr19	23549493	23555054	+	noncoding	ZNF675	protein_coding	ANTISENSE	ENSG00000197372	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr19:23549663-23549703,chr19:23549859-23549887,chr19:23549900-23549909,chr19:23550355-23550374
HML5_19p12d	HERV	HML5	oneside	chr19	23555115	23558908	+	noncoding	ZNF675	protein_coding	ANTISENSE	ENSG00000197372	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr19:23558187-23558519	None
HML3_19p12g	HERV	HML3	prototype	chr19	23572700	23577318	-	coding	ZNF675	protein_coding	SENSE	ENSG00000197372	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERV4_19p12	HERV	HERV4	oneside	chr19	23666052	23671676	+	noncoding	ZNF675	protein_coding	ANTISENSE	ENSG00000197372	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_19p12b	HERV	PRIMA41	oneside	chr19	23700561	23704360	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF675	ENSG00000197372	13341	ZNF681	ENSG00000196172	34835	None	None
HUERSP3_19p12d	HERV	HUERSP3	internal	chr19	23720782	23725058	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF681	ENSG00000196172	14137	ZNF675	ENSG00000197372	33562	None	None
HERV3_19p12e	HERV	HERV3	prototype	chr19	23817565	23824289	-	noncoding	AC139769.1,AC139769.2	transcribed_unprocessed_pseudogene,lncRNA	ANTISENSE,SENSE	ENSG00000233836,ENSG00000267924	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr19:23824059-23824067
HERVK11_19p12b	HERV	HERVK11	prototype	chr19	23847319	23857439	-	coding	AC139769.2	lncRNA	SENSE	ENSG00000267924	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_19p12e	HERV	HML6	prototype	chr19	23864829	23871228	+	noncoding	AC139769.2	lncRNA	ANTISENSE	ENSG00000267924	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_19p12e	HERV	HML5	oneside	chr19	23882529	23886869	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011503.4	ENSG00000287399	10452	AC139769.2	ENSG00000267924	7828	None	None
HML5_19p12f	HERV	HML5	prototype	chr19	23902474	23906068	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011503.4	ENSG00000287399	2979	ZNF726	ENSG00000213967	8808	None	None
PRIMA41_19p12c	HERV	PRIMA41	oneside	chr19	23909820	23914282	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011503.4	ENSG00000287399	10325	ZNF726	ENSG00000213967	594	None	None
HML1_19p12c	HERV	HML1	internal	chr19	23950435	23956522	-	noncoding	AC011503.1	lncRNA	SENSE	ENSG00000269289	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_19p12h	HERV	HML3	internal	chr19	24005300	24007247	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092279.2	ENSG00000268362	26154	RNA5-8SP4	ENSG00000201966	793	None	None
PRIMA41_19p12d	HERV	PRIMA41	unknown	chr19	24079035	24082362	+	noncoding	AC092279.1,AC092279.3	protein_coding,TEC	SENSE,SENSE	ENSG00000213096,ENSG00000279425	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML1_19p12d	HERV	HML1	oneside	chr19	24166421	24167649	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ERVK-28	ENSG00000267696	3470834	AC073534.1	ENSG00000268442	2996	None	None
HERVW_19p12d	HERV	HERVW	internal	chr19	24167650	24170276	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ERVK-28	ENSG00000267696	3468207	AC073534.1	ENSG00000268442	4225	None	None
HML1_19p12e	HERV	HML1	oneside	chr19	24170315	24171486	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ERVK-28	ENSG00000267696	3466997	AC073534.1	ENSG00000268442	6890	None	None
HERVK11_19p11a	HERV	HERVK11	prototype	chr19	24242677	24251824	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073534.1	ENSG00000268442	79252	ERVK-28	ENSG00000267696	3386659	None	None
HERVK11_19p11b	HERV	HERVK11	prototype	chr19	24270242	24273541	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073534.1	ENSG00000268442	106817	ERVK-28	ENSG00000267696	3364942	None	None
HERVK11_19p11c	HERV	HERVK11	internal	chr19	24320890	24324105	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073534.1	ENSG00000268442	157465	ERVK-28	ENSG00000267696	3314378	None	None
HERVK11_19p11d	HERV	HERVK11	unknown	chr19	24324196	24325976	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073534.1	ENSG00000268442	160771	ERVK-28	ENSG00000267696	3312507	None	None
HERVK11_19q11a	HERV	HERVK11	oneside	chr19	27578682	27582277	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073534.1	ENSG00000268442	3415257	ERVK-28	ENSG00000267696	56206	None	None
HML2_19q11	HERV	HML2	oneside	chr19	27637590	27646453	-	coding	ERVK-28,AC112702.1	lncRNA,TEC	SENSE,SENSE	ENSG00000267696,ENSG00000279882	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVK11_19q11b	HERV	HERVK11	prototype	chr19	27703454	27713310	-	noncoding	LINC00662	lncRNA	SENSE	ENSG00000261824	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr19:27705637-27706050,chr19:27708906-27709589,chr19:27709827-27710310,chr19:27711401-27712462	chr19:27706643-27706654,chr19:27707215-27707241,chr19:27707249-27707266,chr19:27707271-27707287,chr19:27707298-27707314,chr19:27707328-27707336,chr19:27707101-27707129,chr19:27711385-27711400,chr19:27711595-27711600,chr19:27711611-27711620,chr19:27706571-27706595,chr19:27709174-27709193
HML5_19q11	HERV	HML5	oneside	chr19	27745824	27750223	+	noncoding	LINC00662	lncRNA	ANTISENSE	ENSG00000261824	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr19:27745884-27745889,chr19:27746135-27746146,chr19:27746149-27746165,chr19:27747133-27747145,chr19:27747690-27747711
HERVKC4_19q11	HERV	HERVKC4	internal	chr19	27750253	27750986	+	noncoding	LINC00662	lncRNA	ANTISENSE	ENSG00000261824	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr19:27750781-27751526	chr19:27750394-27750409
ERVL_19q11	HERV	ERVL	oneside	chr19	27837062	27838931	-	noncoding	AC006504.5	lncRNA	ANTISENSE	ENSG00000267575	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH21_19q11	HERV	HERVFH21	oneside	chr19	27842327	27846933	-	noncoding	AC006504.5	lncRNA	ANTISENSE	ENSG00000267575	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr19:27843253-27843390,chr19:27844298-27844629	None
HERVL66_19q11	HERV	HERVL66	oneside	chr19	27847313	27850169	-	noncoding	AC006504.5,AC006504.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000267575,ENSG00000266977	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_19q11	HERV	HUERSP3	prototype	chr19	27876948	27885917	+	noncoding	AC006504.5,AC006504.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000267575,ENSG00000266977	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19q12	HERV	HERVH	oneside	chr19	28431623	28435712	-	noncoding	AC005394.2	lncRNA	SENSE	ENSG00000283403	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_19q12a	HERV	ERV316A3	internal	chr19	28511166	28513266	+	noncoding	AC005394.2,AC005381.1,AC005394.1,AC005616.1	lncRNA,lncRNA,lncRNA,lncRNA	ANTISENSE,ANTISENSE,ANTISENSE,SENSE	ENSG00000283403,ENSG00000267243,ENSG00000266893,ENSG00000267423	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_19q12	HERV	PABLA	internal	chr19	28522669	28528650	+	noncoding	AC005394.2,AC005381.1,AC005394.1	lncRNA,lncRNA,lncRNA	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000283403,ENSG00000267243,ENSG00000266893	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_19q12	HERV	HERVE	prototype	chr19	28606436	28615273	+	noncoding	AC005394.2,AC005394.1,AC079466.2,AC079466.1	lncRNA,lncRNA,lncRNA,lncRNA	ANTISENSE,ANTISENSE,ANTISENSE,SENSE	ENSG00000283403,ENSG00000266893,ENSG00000267537,ENSG00000266976	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr19:28609471-28609554	chr19:28606625-28606643,chr19:28606728-28606733,chr19:28607268-28607288,chr19:28607316-28607327,chr19:28612828-28612830
ERV316A3_19q12b	HERV	ERV316A3	internal	chr19	29034287	29036173	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01532	ENSG00000267014	19127	AC011505.1	ENSG00000288017	46921	None	None
ERVLE_19q12a	HERV	ERVLE	internal	chr19	29037481	29038668	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01532	ENSG00000267014	22321	AC011505.1	ENSG00000288017	44426	None	None
ERV316A3_19q12c	HERV	ERV316A3	internal	chr19	29451755	29453981	+	noncoding	AC011474.1	lncRNA	ANTISENSE	ENSG00000264515	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_19q12d	HERV	ERV316A3	internal	chr19	29454008	29456906	+	noncoding	AC011474.1	lncRNA	ANTISENSE	ENSG00000264515	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_19q12b	HERV	ERVLE	internal	chr19	29732313	29736001	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008798.3	ENSG00000286867	39503	C19orf12	ENSG00000131943	16524	None	None
ERV316A3_19q12e	HERV	ERV316A3	prototype	chr19	30745577	30752624	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011507.1	ENSG00000267081	98351	ZNF536	ENSG00000198597	32039	None	None
ERV316A3_19q12f	HERV	ERV316A3	internal	chr19	31898817	31900435	-	noncoding	LINC01837	lncRNA	SENSE	ENSG00000267489	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_19q13.11a	HERV	ERV316A3	oneside	chr19	31953669	31957035	+	noncoding	LINC01837	lncRNA	ANTISENSE	ENSG00000267489	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_19q13.11	HERV	ERVLB4	internal	chr19	33184040	33184926	-	noncoding	LRP3	protein_coding	ANTISENSE	ENSG00000130881	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_19q13.11b	HERV	ERV316A3	internal	chr19	33782953	33786722	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CHST8	ENSG00000124302	9444	KCTD15	ENSG00000153885	9211	None	None
HERVH_19q13.11	HERV	HERVH	oneside	chr19	34514096	34517725	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	WTIP	ENSG00000142279	1792	RPS26P55	ENSG00000239210	15702	None	None
HERVS71_19q13.11a	HERV	HERVS71	prototype	chr19	34552716	34561339	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SCGB1B2P	ENSG00000268751	15394	ZNF807P	ENSG00000248830	7321	None	None
LTR25_19q13.11	HERV	LTR25	internal	chr19	34621011	34625016	-	noncoding	SCGB2B2	protein_coding	SENSE	ENSG00000205209	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_19q13.11	HERV	HUERSP3	oneside	chr19	34711792	34713511	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF302	ENSG00000089335	25395	AC020910.5	ENSG00000274104	19787	None	None
HERVS71_19q13.11b	HERV	HERVS71	prototype	chr19	34721933	34727787	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF302	ENSG00000089335	35536	AC020910.5	ENSG00000274104	5511	None	None
HERVL74_19q13.11a	HERV	HERVL74	internal	chr19	34750581	34752268	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF181	ENSG00000197841	5203	ZNF599	ENSG00000153896	5805	None	None
HERVL74_19q13.11b	HERV	HERVL74	internal	chr19	34945839	34946826	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008555.7	ENSG00000280106	2212	ZNF30	ENSG00000168661	669	None	None
ERVLE_19q13.12a	HERV	ERVLE	oneside	chr19	35179191	35182123	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FXYD5	ENSG00000089327	9310	FAM187B	ENSG00000177558	42677	None	None
ERVLE_19q13.12b	HERV	ERVLE	oneside	chr19	35196745	35199045	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FXYD5	ENSG00000089327	26864	FAM187B	ENSG00000177558	25755	None	None
HML2_19q13.12a	HERV	HML2	internal	chr19	35572527	35576532	-	coding	AD000090.1	lncRNA	ANTISENSE	ENSG00000283907	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr19:35575598-35575646,chr19:35575675-35575742,chr19:35575783-35575810,chr19:35575642-35575675
HERVH_19q13.12a	HERV	HERVH	prototype	chr19	36155475	36161023	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC002984.1	ENSG00000267005	12383	COX7A1	ENSG00000161281	3026	chr19:36157487-36157669	None
ERVLE_19q13.12c	HERV	ERVLE	internal	chr19	36161029	36168089	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC002984.1	ENSG00000267005	5317	COX7A1	ENSG00000161281	8580	None	None
HERVH_19q13.12b	HERV	HERVH	prototype	chr19	36259508	36265220	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092296.2	ENSG00000267053	39344	ZNF565	ENSG00000196357	13251	None	None
HERVS71_19q13.12a	HERV	HERVS71	prototype	chr19	36324873	36331043	-	coding	LINC00665	lncRNA	SENSE	ENSG00000232677	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr19:36325427-36325434
ERVLB4_19q13.12	HERV	ERVLB4	oneside	chr19	36669468	36673749	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074138.1	ENSG00000276071	64	LINC01534	ENSG00000225975	8887	None	None
ERVLE_19q13.12d	HERV	ERVLE	internal	chr19	36863319	36863947	-	noncoding	ZNF345	protein_coding	ANTISENSE	ENSG00000251247	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_19q13.12b	HERV	HML2	prototype	chr19	37106647	37116164	-	noncoding	ZNF420,AC012309.1,ZNF585A	protein_coding,protein_coding,protein_coding	ANTISENSE,SENSE,SENSE	ENSG00000197050,ENSG00000267360,ENSG00000196967	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVS71_19q13.12b	HERV	HERVS71	oneside	chr19	37554746	37558628	-	coding	ZNF571-AS1,ZNF540,ZNF571	lncRNA,protein_coding,protein_coding	ANTISENSE,ANTISENSE,SENSE	ENSG00000267470,ENSG00000171817,ENSG00000180479	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_19q13.2	HERV	HERVL40	oneside	chr19	38294344	38298856	+	noncoding	AC011479.2,AC011479.1	protein_coding,misc_RNA	SENSE,SENSE	ENSG00000267748,ENSG00000200209	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_19q13.2a	HERV	HERVH	prototype	chr19	38750366	38755295	+	noncoding	CAPN12	protein_coding	ANTISENSE	ENSG00000182472	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_19q13.2	HERV	HML3	prototype	chr19	38935164	38941835	-	coding	AC011455.2,ERVK9-11,FBXO17	protein_coding,lncRNA,protein_coding	SENSE,SENSE,SENSE	ENSG00000269547,ENSG00000269486,ENSG00000269190	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
MER101_19q13.2a	HERV	MER101	internal	chr19	39041731	39044492	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FBXO27	ENSG00000161243	8946	ACP7	ENSG00000183760	39421	None	None
HUERSP3_19q13.2a	HERV	HUERSP3	internal	chr19	39626845	39630541	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC005176.2	ENSG00000269519	759	LGALS13	ENSG00000105198	19371	None	None
HUERSP3_19q13.2b	HERV	HUERSP3	oneside	chr19	39671694	39675061	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LGALS16	ENSG00000249861	11047	AC005515.1	ENSG00000226025	4313	None	None
PRIMA41_19q13.2a	HERV	PRIMA41	internal	chr19	39943749	39946303	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSMC4	ENSG00000013275	24862	PRR13P5	ENSG00000187534	69	None	chr19:39944107-39944124
PRIMA41_19q13.2b	HERV	PRIMA41	internal	chr19	39947753	39951779	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSMC4	ENSG00000013275	19386	PRR13P5	ENSG00000187534	4073	None	None
MER101_19q13.2b	HERV	MER101	oneside	chr19	40104327	40107181	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VN1R96P	ENSG00000230086	14130	AC005614.1	ENSG00000269296	9921	None	None
MER101_19q13.2c	HERV	MER101	oneside	chr19	40110255	40116410	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VN1R96P	ENSG00000230086	4901	AC005614.1	ENSG00000269296	15849	chr19:40111325-40111478	None
MER34B_19q13.2	HERV	MER34B	oneside	chr19	40299587	40304817	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-945P	ENSG00000206674	3	C19orf47	ENSG00000160392	14719	None	None
ERVLE_19q13.2a	HERV	ERVLE	internal	chr19	40859617	40861431	+	noncoding	AC008537.1	protein_coding	SENSE	ENSG00000268797	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK14C_19q13.2	HERV	HERVK14C	prototype	chr19	40954173	40959190	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYP2B7P	ENSG00000256612	3513	CYP2B6	ENSG00000197408	32092	None	None
HERVW_19q13.2	HERV	HERVW	prototype	chr19	40986243	40988149	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYP2B6	ENSG00000197408	3133	CYP2B7P	ENSG00000256612	35583	None	None
ERV316A3_19q13.2	HERV	ERV316A3	internal	chr19	41493877	41495898	-	noncoding	PCAT19	lncRNA	SENSE	ENSG00000267107	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr19:41493512-41493884	None
HUERSP1_19q13.2a	HERV	HUERSP1	internal	chr19	41532323	41532993	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01480	ENSG00000270164	2190	AC243960.3	ENSG00000268355	149	None	None
HUERSP2_19q13.2	HERV	HUERSP2	prototype	chr19	41536367	41540526	+	noncoding	LINC01480	lncRNA	SENSE	ENSG00000270164	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PABLA_19q13.2	HERV	PABLA	oneside	chr19	41551919	41554973	-	noncoding	AC243960.1,CEACAM21,AC243960.7	lncRNA,protein_coding,TEC	ANTISENSE,ANTISENSE,SENSE	ENSG00000268027,ENSG00000007129,ENSG00000280014	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL74_19q13.2	HERV	HERVL74	internal	chr19	41611030	41611758	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CEACAM4	ENSG00000105352	7213	CEACAMP3	ENSG00000239736	5046	None	None
HUERSP1_19q13.2b	HERV	HUERSP1	internal	chr19	41650534	41652478	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC243960.4	ENSG00000268582	198	AC243960.5	ENSG00000269354	9932	None	None
ERVLE_19q13.2b	HERV	ERVLE	internal	chr19	42029596	42031584	-	noncoding	GRIK5	protein_coding	SENSE	ENSG00000105737	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19q13.2b	HERV	HERVH	oneside	chr19	42446956	42450166	-	noncoding	LIPE-AS1	lncRNA	ANTISENSE	ENSG00000213904	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_19q13.2a	HERV	MER41	oneside	chr19	42487086	42492400	-	noncoding	LIPE-AS1	lncRNA	ANTISENSE	ENSG00000213904	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_19q13.2b	HERV	MER41	internal	chr19	42492710	42494666	-	noncoding	LIPE-AS1	lncRNA	ANTISENSE	ENSG00000213904	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_19q13.2c	HERV	MER41	oneside	chr19	42494709	42496959	-	noncoding	LIPE-AS1	lncRNA	ANTISENSE	ENSG00000213904	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_19q13.2	HERV	MER61	internal	chr19	42616812	42617821	+	noncoding	LIPE-AS1	lncRNA	SENSE	ENSG00000213904	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_19q13.2	HERV	LTR19	internal	chr19	42618150	42619169	+	noncoding	LIPE-AS1	lncRNA	SENSE	ENSG00000213904	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_19q13.2c	HERV	HUERSP3	oneside	chr19	42683090	42689360	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSG3	ENSG00000221826	32278	RPS10P28	ENSG00000243167	12274	None	None
HML5_19q13.2	HERV	HML5	oneside	chr19	42696053	42698631	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS10P28	ENSG00000243167	25237	PSG3	ENSG00000221826	23007	None	None
HUERSP3B_19q13.2	HERV	HUERSP3B	oneside	chr19	42790564	42794718	-	noncoding	PSG8	protein_coding	SENSE	ENSG00000124467	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_19q13.31a	HERV	HUERSP3B	oneside	chr19	43101358	43105490	-	noncoding	AC004784.1	lncRNA	ANTISENSE	ENSG00000282943	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_19q13.31b	HERV	HUERSP3B	oneside	chr19	43226418	43230569	-	noncoding	PSG9,CEACAMP10	protein_coding,transcribed_processed_pseudogene	SENSE,SENSE	ENSG00000183668,ENSG00000241104	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_19q13.31c	HERV	HUERSP3B	oneside	chr19	43288298	43292202	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CEACAMP4	ENSG00000230681	10969	CEACAMP11	ENSG00000236123	3980	None	None
HERVIP10F_19q13.31	HERV	HERVIP10F	prototype	chr19	43308380	43317344	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005392.2	ENSG00000231412	11951	CEACAMP4	ENSG00000230681	3857	None	chr19:43317236-43317239
HERVH_19q13.31	HERV	HERVH	prototype	chr19	43323511	43329384	-	noncoding	AC005392.2	lncRNA	SENSE	ENSG00000231412	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_19q13.31a	HERV	ERVLE	internal	chr19	43364281	43366105	-	noncoding	AC005392.3	lncRNA	SENSE	ENSG00000272396	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_19q13.31b	HERV	ERVLE	internal	chr19	43369119	43370655	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005392.3	ENSG00000272396	149	CD177P1	ENSG00000204933	2087	None	None
ERV316A3_19q13.31	HERV	ERV316A3	oneside	chr19	43813525	43818789	-	noncoding	LYPD5	protein_coding	SENSE	ENSG00000159871	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_19q13.31	HERV	MER4B	internal	chr19	43955744	43958531	-	noncoding	ZNF221	protein_coding	ANTISENSE	ENSG00000159905	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_19q13.31a	HERV	ERVLB4	oneside	chr19	43979355	43980979	+	noncoding	ZNF155	protein_coding	SENSE	ENSG00000204920	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_19q13.31b	HERV	ERVLB4	internal	chr19	44017410	44019341	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF230	ENSG00000159882	3486	AC067968.2	ENSG00000267144	3777	None	None
ERVLB4_19q13.31c	HERV	ERVLB4	internal	chr19	44035341	44036764	+	noncoding	AC067968.1	protein_coding	SENSE	ENSG00000267022	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_19q13.31d	HERV	ERVLB4	internal	chr19	44110194	44111136	+	noncoding	AC021092.1	lncRNA	ANTISENSE	ENSG00000186019	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_19q13.31c	HERV	ERVLE	internal	chr19	44181562	44184726	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF226	ENSG00000167380	3181	ZNF227	ENSG00000131115	22821	None	None
ERVLE_19q13.31d	HERV	ERVLE	oneside	chr19	44195798	44196936	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF226	ENSG00000167380	17417	ZNF227	ENSG00000131115	10611	None	None
PRIMA41_19q13.31	HERV	PRIMA41	internal	chr19	44282650	44284525	+	noncoding	ZNF235	protein_coding	ANTISENSE	ENSG00000159917	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_19q13.31	HERV	HML3	prototype	chr19	44631504	44634709	-	noncoding	IGSF23,AC243964.3	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000216588,ENSG00000266903	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PABLA_19q13.32	HERV	PABLA	internal	chr19	46059546	46061292	-	noncoding	IGFL4	protein_coding	SENSE	ENSG00000204869	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_19q13.32a	HERV	HERVH	prototype	chr19	46102204	46109320	-	noncoding	AC007785.1	lncRNA	ANTISENSE	ENSG00000267922	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL32_19q13.32	HERV	HERVL32	internal	chr19	46164533	46165959	+	noncoding	AC007785.1,AC006262.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000267922,ENSG00000269729	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_19q13.32b	HERV	HERVH	oneside	chr19	46201641	46203386	-	noncoding	IGFL2-AS1,AC006262.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000268621,ENSG00000268460	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr19:46202052-46202317	chr19:46203081-46203086,chr19:46203109-46203131
HERVH_19q13.32c	HERV	HERVH	prototype	chr19	46273189	46278852	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HIF3A	ENSG00000124440	18194	IGFL1P2	ENSG00000268238	12331	None	None
ERVLB4_19q13.32	HERV	ERVLB4	oneside	chr19	46367379	46369106	+	noncoding	PPP5C	protein_coding	SENSE	ENSG00000011485	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19q13.32d	HERV	HERVH	prototype	chr19	47049869	47055408	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZC3H4	ENSG00000130749	8779	TMEM160	ENSG00000130748	1245	None	None
HERVH_19q13.32e	HERV	HERVH	prototype	chr19	47392829	47398756	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DHX34	ENSG00000134815	10125	MEIS3	ENSG00000105419	4368	None	None
ERVLE_19q13.33	HERV	ERVLE	internal	chr19	49215081	49217370	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRPM4	ENSG00000130529	3245	SLC6A21P	ENSG00000269009	38102	None	None
HERVL40_19q13.33	HERV	HERVL40	prototype	chr19	49222180	49229968	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRPM4	ENSG00000130529	10344	SLC6A21P	ENSG00000269009	25504	None	None
HERVL32_19q13.33a	HERV	HERVL32	oneside	chr19	49278812	49280305	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SUMO1P4	ENSG00000235555	3392	SLC6A16	ENSG00000063127	9333	None	None
HERVL32_19q13.33b	HERV	HERVL32	internal	chr19	49280598	49283716	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SUMO1P4	ENSG00000235555	5178	SLC6A16	ENSG00000063127	5922	None	None
HERVL32_19q13.33c	HERV	HERVL32	oneside	chr19	49283904	49285585	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SUMO1P4	ENSG00000235555	8484	SLC6A16	ENSG00000063127	4053	None	None
HERV3_19q13.33	HERV	HERV3	prototype	chr19	49952495	49957720	+	noncoding	AC011452.2,SIGLEC11	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000269179,ENSG00000161640	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVEA_19q13.33	HERV	HERVEA	oneside	chr19	50346977	50350190	-	noncoding	NR1H2	protein_coding	ANTISENSE	ENSG00000131408	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_19q13.33a	HERV	ERVLB4	internal	chr19	50882256	50883600	+	noncoding	KLKP1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000197588	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_19q13.33b	HERV	ERVLB4	internal	chr19	50888600	50889192	+	noncoding	KLKP1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000197588	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML1_19q13.41a	HERV	HML1	oneside	chr19	51397351	51399492	-	noncoding	AC008750.7,NIFKP6	lncRNA,processed_pseudogene	ANTISENSE,SENSE	ENSG00000268889,ENSG00000268144	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_19q13.41b	HERV	HML1	oneside	chr19	51399543	51402957	-	noncoding	AC008750.7,NIFKP6	lncRNA,processed_pseudogene	ANTISENSE,SENSE	ENSG00000268889,ENSG00000268144	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_19q13.41a	HERV	ERVLE	internal	chr19	51514294	51515166	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SIGLEC27P	ENSG00000269580	4983	SIGLEC6	ENSG00000105492	2653	None	None
ERVLE_19q13.41b	HERV	ERVLE	internal	chr19	51676035	51677579	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P51	ENSG00000243469	26425	SPACA6P-AS	ENSG00000269959	7784	None	chr19:51676653-51676658
ERVLB4_19q13.41	HERV	ERVLB4	oneside	chr19	51780527	51782818	+	noncoding	FPR1	protein_coding	ANTISENSE	ENSG00000171051	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_19q13.41a	HERV	HERVL74	internal	chr19	51801312	51802250	+	noncoding	FPR1,FPR3	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000171051,ENSG00000187474	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_19q13.41f	HERV	HML6	tandem*	chr19	51804696	51811939	-	noncoding	FPR3,ZNF577	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000187474,ENSG00000161551	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr19:51805564-51805670,chr19:51807160-51807532,chr19:51809832-51810185	chr19:51811548-51811605,chr19:51811617-51811631,chr19:51804859-51804861,chr19:51807160-51807164,chr19:51811298-51811317,chr19:51811349-51811362
HERVL74_19q13.41b	HERV	HERVL74	internal	chr19	51811941	51812767	+	noncoding	FPR3,ZNF577	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000187474,ENSG00000161551	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_19q13.41a	HERV	HML6	prototype	chr19	51975875	51981430	+	noncoding	ZNF350-AS1,ZNF350	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000269235,ENSG00000256683	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV4_19q13.41	HERV	HERV4	oneside	chr19	52059698	52062168	+	noncoding	ZNF432,AC011468.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000256087,ENSG00000260160	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_19q13.41a	HERV	MER4	oneside	chr19	52102788	52107649	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF841	ENSG00000197608	7023	AC011468.4	ENSG00000270248	2669	None	None
MER4_19q13.41b	HERV	MER4	internal	chr19	52146518	52152215	+	noncoding	AC011468.2	lncRNA	ANTISENSE	ENSG00000267827	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_19q13.41a	HERV	HML3	prototype	chr19	52300620	52307999	-	noncoding	ZNF480,AC010320.5	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000198464,ENSG00000269535	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML6_19q13.41b	HERV	HML6	oneside	chr19	52331491	52332825	+	noncoding	AC010320.5	lncRNA	ANTISENSE	ENSG00000269535	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_19q13.41c	HERV	HML6	prototype	chr19	52410183	52414733	-	noncoding	ZNF528	protein_coding	ANTISENSE	ENSG00000167555	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVKC4_19q13.41	HERV	HERVKC4	prototype	chr19	52460867	52466497	-	coding	ZNF578	protein_coding	ANTISENSE	ENSG00000258405	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_19q13.41a	HERV	HERVL	prototype	chr19	52468552	52470830	+	noncoding	ZNF578	protein_coding	SENSE	ENSG00000258405	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_19q13.41d	HERV	HML6	oneside	chr19	52475656	52481443	-	noncoding	ZNF578	protein_coding	ANTISENSE	ENSG00000258405	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19q13.41a	HERV	HERVH	prototype	chr19	52620684	52627315	+	noncoding	ZNF83	protein_coding	ANTISENSE	ENSG00000167766	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr19:52625224-52625587,chr19:52626306-52626474	None
HERVH_19q13.41b	HERV	HERVH	prototype	chr19	52627795	52633395	+	noncoding	ZNF83	protein_coding	ANTISENSE	ENSG00000167766	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr19:52628966-52629212	None
HERVIP10F_19q13.41a	HERV	HERVIP10F	internal	chr19	52649405	52651539	+	noncoding	ZNF83,AC022150.4	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000167766,ENSG00000269825	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_19q13.41	HERV	HERVIP10FH	oneside	chr19	52665503	52668412	+	noncoding	ZNF83	protein_coding	ANTISENSE	ENSG00000167766	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_19q13.41b	HERV	HERVIP10F	oneside	chr19	52668411	52670554	+	noncoding	ZNF83	protein_coding	ANTISENSE	ENSG00000167766	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_19q13.41a	HERV	HML2	internal	chr19	52745023	52748339	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF600	ENSG00000189190	1603	ZNF611	ENSG00000213020	9950	None	None
HML2_19q13.41b	HERV	HML2	oneside	chr19	52748422	52750454	-	noncoding	ZNF600	protein_coding	SENSE	ENSG00000189190	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HML3_19q13.41b	HERV	HML3	internal	chr19	52750459	52754253	-	coding	ZNF600	protein_coding	SENSE	ENSG00000189190	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HML3_19q13.41c	HERV	HML3	oneside	chr19	52754314	52755540	-	noncoding	ZNF600	protein_coding	SENSE	ENSG00000189190	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVH_19q13.41c	HERV	HERVH	oneside	chr19	52755542	52756855	+	noncoding	ZNF600	protein_coding	ANTISENSE	ENSG00000189190	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_19q13.41	HERV	HARLEQUIN	prototype	chr19	52898525	52904852	-	noncoding	ZNF888	protein_coding	SENSE	ENSG00000213793	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVE_19q13.41	HERV	HERVE	oneside	chr19	52956727	52962193	+	coding	ZNF816-ZNF321P,ZNF816,AC010328.3	protein_coding,protein_coding,lncRNA	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000221874,ENSG00000180257,ENSG00000269082	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML6_19q13.41e	HERV	HML6	oneside	chr19	52984535	52989576	-	noncoding	ZNF702P	transcribed_processed_pseudogene	SENSE	ENSG00000242779	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_19q13.41	HERV	HERVFRD	internal	chr19	53007847	53011898	+	coding	ZNF702P,AC010328.1	transcribed_processed_pseudogene,lncRNA	ANTISENSE,SENSE	ENSG00000242779,ENSG00000267943	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr19:53008458-53008467,chr19:53008496-53008504,chr19:53008515-53008531
HERVL_19q13.41b	HERV	HERVL	internal	chr19	53029310	53033328	+	noncoding	ZNF702P	transcribed_processed_pseudogene	ANTISENSE	ENSG00000242779	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_19q13.42	HERV	MER101	internal	chr19	53318359	53320565	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF845	ENSG00000213799	13184	VN1R6P	ENSG00000174677	2316	None	None
HML2_19q13.42	HERV	HML2	oneside	chr19	53359095	53364791	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF845	ENSG00000213799	2189	ZNF525	ENSG00000203326	902	None	None
HERV3_19q13.42a	HERV	HERV3	oneside	chr19	53366857	53369236	-	noncoding	ZNF525	protein_coding	ANTISENSE	ENSG00000203326	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_19q13.42b	HERV	HERV3	oneside	chr19	53433104	53438199	-	noncoding	TPM3P9,AC022137.3,AC022137.4	transcribed_processed_pseudogene,protein_coding,lncRNA	ANTISENSE,ANTISENSE,SENSE	ENSG00000241015,ENSG00000286261,ENSG00000287608	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr19:53433138-53433238	None
HERV3_19q13.42c	HERV	HERV3	internal	chr19	53438276	53439966	-	noncoding	TPM3P9,AC022137.3,AC022137.4	transcribed_processed_pseudogene,protein_coding,lncRNA	ANTISENSE,ANTISENSE,SENSE	ENSG00000241015,ENSG00000286261,ENSG00000287608	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_19q13.42d	HERV	HERV3	oneside	chr19	53469861	53476656	-	noncoding	AC022137.4,ZNF813	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000287608,ENSG00000198346	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_19q13.42	HERV	HERVL40	internal	chr19	53506708	53508447	+	noncoding	AC011487.1	transcribed_processed_pseudogene	SENSE	ENSG00000213777	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_19q13.42	HERV	ERV316A3	internal	chr19	53622561	53625638	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL317P	ENSG00000242668	4075	AC011487.3	ENSG00000269608	5307	chr19:53622516-53622592	None
MER41_19q13.42	HERV	MER41	internal	chr19	53652492	53653349	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DPRX	ENSG00000204595	15483	RNU6-698P	ENSG00000200393	336	None	None
HERVH_19q13.42a	HERV	HERVH	prototype	chr19	53831404	53837348	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NLRP12	ENSG00000142405	7010	MYADM-AS1	ENSG00000228323	17233	None	chr19:53832501-53832521
ERVLE_19q13.42	HERV	ERVLE	internal	chr19	53864254	53865774	+	noncoding	MYADM-AS1,MYADM	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000228323,ENSG00000179820	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr19:53864747-53864768,chr19:53865622-53865637,chr19:53865678-53865698
ERVLB4_19q13.42a	HERV	ERVLB4	oneside	chr19	54568262	54571051	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC245036.2	ENSG00000235181	16006	LILRA2	ENSG00000239998	1869	None	None
MER4B_19q13.42a	HERV	MER4B	oneside	chr19	54616320	54617819	+	noncoding	LILRB1	protein_coding	SENSE	ENSG00000104972	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr19:54616299-54616339,chr19:54616960-54616983,chr19:54617122-54617150
MER4B_19q13.42b	HERV	MER4B	internal	chr19	54618131	54620746	+	noncoding	LILRB1	protein_coding	SENSE	ENSG00000104972	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_19q13.42b	HERV	ERVLB4	internal	chr19	54653775	54654578	-	noncoding	LILRB4	protein_coding	ANTISENSE	ENSG00000186818	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_19q13.42	HERV	HUERSP3	prototype	chr19	54672643	54677704	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC243962.1	ENSG00000225370	52	LILRP1	ENSG00000186152	18900	None	None
ERVLB4_19q13.42c	HERV	ERVLB4	oneside	chr19	54685144	54687144	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LILRP1	ENSG00000186152	9460	AC243962.1	ENSG00000225370	12553	None	None
HERVH_19q13.42b	HERV	HERVH	prototype	chr19	54894297	54900597	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NCR1	ENSG00000189430	5551	AC245128.3	ENSG00000268734	2877	None	None
HERVH_19q13.42c	HERV	HERVH	prototype	chr19	55006829	55012423	-	noncoding	AC011476.3	lncRNA	ANTISENSE	ENSG00000267265	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19q13.42d	HERV	HERVH	prototype	chr19	55122805	55129538	+	noncoding	AC010327.8,MIR7975	lncRNA,miRNA	SENSE,ANTISENSE	ENSG00000287170,ENSG00000275863	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_19q13.42d	HERV	ERVLB4	internal	chr19	55213666	55215420	+	noncoding	AC010327.7	lncRNA	ANTISENSE	ENSG00000286230	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_19q13.43a	HERV	MER4	internal	chr19	56341503	56342332	-	noncoding	ZSCAN5A,AC006116.9	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000131848,ENSG00000267549	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_19q13.43b	HERV	MER4	internal	chr19	56343726	56346607	-	noncoding	ZSCAN5A,AC006116.9	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000131848,ENSG00000267549	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_19q13.43	HERV	HUERSP3	oneside	chr19	56347586	56351719	+	noncoding	ZSCAN5A,AC006116.9,AC006116.7	protein_coding,lncRNA,lncRNA	ANTISENSE,SENSE,ANTISENSE	ENSG00000131848,ENSG00000267549,ENSG00000267429	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_19q13.43	HERV	HERVL	oneside	chr19	57194409	57199946	-	noncoding	ZNF264	protein_coding	ANTISENSE	ENSG00000083844	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
MER41_19q13.43a	HERV	MER41	oneside	chr19	57275342	57278839	-	noncoding	ZNF460-AS1	lncRNA	SENSE	ENSG00000267871	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML6_19q13.43a	HERV	HML6	prototype	chr19	57512616	57518488	+	noncoding	AC003005.1,ZNF773	protein_coding,protein_coding	SENSE,SENSE	ENSG00000268107,ENSG00000152439	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
LTR25_19q13.43	HERV	LTR25	internal	chr19	57561304	57567399	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF416	ENSG00000083817	4167	ZNF550	ENSG00000251369	1441	None	None
HERVL74_19q13.43	HERV	HERVL74	internal	chr19	57646371	57648245	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF211	ENSG00000121417	2330	TPRG1LP1	ENSG00000269097	16035	None	None
LTR46_19q13.43	HERV	LTR46	oneside	chr19	57651316	57656645	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF211	ENSG00000121417	7275	TPRG1LP1	ENSG00000269097	7635	None	chr19:57651470-57651481,chr19:57651504-57651521,chr19:57651535-57651547,chr19:57651522-57651525
PRIMAX_19q13.43	HERV	PRIMAX	internal	chr19	57763516	57767119	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF776	ENSG00000152443	5368	ZNF586	ENSG00000083828	2536	None	None
HERVIP10FH_19q13.43	HERV	HERVIP10FH	prototype	chr19	57799186	57805431	-	noncoding	ZNF586,ZNF552	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000083828,ENSG00000178935	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr19:57803317-57803354
MER41_19q13.43b	HERV	MER41	oneside	chr19	57892052	57893158	+	noncoding	AC010326.3	protein_coding	ANTISENSE	ENSG00000269476	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_19q13.43	HERV	HML1	oneside	chr19	57896193	57904466	+	coding	AC010326.3,ZNF417	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000269476,ENSG00000173480	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr19:57902257-57902638,chr19:57904455-57904622	None
HERV4_19q13.43a	HERV	HERV4	oneside	chr19	58248684	58250591	-	noncoding	ZNF544,AC020915.5	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000198131,ENSG00000283515	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV4_19q13.43b	HERV	HERV4	internal	chr19	58251074	58253959	-	noncoding	ZNF544,AC020915.5	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000198131,ENSG00000283515	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML6_19q13.43b	HERV	HML6	prototype	chr19	58305671	58315267	+	noncoding	AC020915.5,AC020915.1,ERVK3-1,AC010642.2	protein_coding,lncRNA,protein_coding,lncRNA	SENSE,SENSE,SENSE,ANTISENSE	ENSG00000283515,ENSG00000267216,ENSG00000142396,ENSG00000283103	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVH_20p13a	HERV	HERVH	prototype	chr20	172772	178853	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DEFB127	ENSG00000088782	13609	DEFB128	ENSG00000185982	9000	None	None
HERVW_20p13	HERV	HERVW	oneside	chr20	190692	194167	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DEFB129	ENSG00000125903	33091	DEFB128	ENSG00000185982	981	None	None
HML5_20p13	HERV	HML5	prototype	chr20	467862	472902	-	noncoding	CSNK2A1	protein_coding	SENSE	ENSG00000101266	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
LTR19_20p13	HERV	LTR19	insert*	chr20	778881	784230	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC52A3	ENSG00000101276	2866	FAM110A	ENSG00000125898	49485	None	None
HERVIP10F_20p13	HERV	HERVIP10F	prototype	chr20	791798	800945	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC52A3	ENSG00000101276	15783	FAM110A	ENSG00000125898	32770	None	chr20:792169-792179
MER4_20p13a	HERV	MER4	oneside	chr20	802729	810435	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC52A3	ENSG00000101276	26714	FAM110A	ENSG00000125898	23280	None	None
HERVH_20p13b	HERV	HERVH	prototype	chr20	896877	901599	+	noncoding	ANGPT4	protein_coding	ANTISENSE	ENSG00000101280	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_20p13	HERV	PRIMA41	oneside	chr20	925951	928910	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RSPO4	ENSG00000101282	29542	ANGPT4	ENSG00000101280	9617	None	None
MER4_20p13b	HERV	MER4	internal	chr20	930663	933696	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RSPO4	ENSG00000101282	24756	ANGPT4	ENSG00000101280	14329	None	None
HERVL_20p13	HERV	HERVL	oneside	chr20	1156900	1158193	-	noncoding	PSMF1	protein_coding	ANTISENSE	ENSG00000125818	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_20p13	HERV	HML6	prototype	chr20	1396802	1402704	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FKBP1A	ENSG00000088832	3630	NSFL1C	ENSG00000088833	39458	None	None
HERVL74_20p13a	HERV	HERVL74	internal	chr20	1581915	1582500	+	noncoding	AL049634.2,SIRPB1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000260861,ENSG00000101307	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_20p13b	HERV	HERVL74	internal	chr20	1614969	1615561	+	noncoding	AL049634.2,SIRPB1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000260861,ENSG00000101307	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_20p13c	HERV	HERVL74	internal	chr20	1701239	1701829	+	noncoding	SIRPB3P	unprocessed_pseudogene	ANTISENSE	ENSG00000223750	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_20p13c	HERV	HERVH	prototype	chr20	1727239	1733570	-	noncoding	AL109809.4	lncRNA	SENSE	ENSG00000286288	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_20p13a	HERV	ERVLE	internal	chr20	2044140	2046531	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PDYN-AS1	ENSG00000233896	14112	RPL7P2	ENSG00000227663	29024	None	None
ERV316A3_20p13	HERV	ERV316A3	internal	chr20	2342170	2342930	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TGM3	ENSG00000125780	1091	TGM6	ENSG00000166948	37971	None	None
HERVL40_20p13	HERV	HERVL40	prototype	chr20	2672035	2679386	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049712.1	ENSG00000228293	6161	EBF4	ENSG00000088881	13492	None	None
ERVLE_20p13b	HERV	ERVLE	internal	chr20	2848432	2849733	-	noncoding	VPS16	protein_coding	ANTISENSE	ENSG00000215305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_20p13c	HERV	ERVLE	internal	chr20	2991804	2994314	-	noncoding	PTPRA	protein_coding	ANTISENSE	ENSG00000132670	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_20p13d	HERV	ERVLE	internal	chr20	4541468	4542913	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121916.1	ENSG00000228210	48080	AL121781.1	ENSG00000238282	16268	None	None
MER41_20p12.3	HERV	MER41	prototype	chr20	5180317	5181533	-	noncoding	CDS2	protein_coding	ANTISENSE	ENSG00000101290	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_20p12.3	HERV	HML3	prototype	chr20	5303843	5308712	+	noncoding	PROKR2	protein_coding	ANTISENSE	ENSG00000101292	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_20p12.3	HERV	MER4B	internal	chr20	5330559	5332056	-	noncoding	AL121757.2	lncRNA	ANTISENSE	ENSG00000266908	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV4_20p12.3	HERV	HERV4	oneside	chr20	5481092	5482459	-	noncoding	AL121757.2	lncRNA	ANTISENSE	ENSG00000266908	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_20p12.3a	HERV	ERVLE	internal	chr20	5488280	5490856	-	noncoding	AL121757.2,LINC00654	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000266908,ENSG00000205181	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr20:5489184-5489186
HERVFRD_20p12.3	HERV	HERVFRD	oneside	chr20	5519539	5522808	+	noncoding	LINC00654	lncRNA	ANTISENSE	ENSG00000205181	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_20p12.3b	HERV	ERVLE	internal	chr20	7092291	7095406	+	noncoding	AL096799.1	lncRNA	SENSE	ENSG00000232271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_20p12.3c	HERV	ERVLE	internal	chr20	7236342	7237409	+	noncoding	LINC01428	lncRNA	ANTISENSE	ENSG00000228888	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_20p12.3a	HERV	ERVLB4	prototype	chr20	7377069	7387024	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL547P	ENSG00000240584	246538	MIR8062	ENSG00000278159	5377	None	None
ERVLB4_20p12.3b	HERV	ERVLB4	oneside	chr20	7577898	7583890	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL547P	ENSG00000240584	49672	MIR8062	ENSG00000278159	206206	None	None
PABLB_20p12.3	HERV	PABLB	internal	chr20	7740519	7743108	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031679.1	ENSG00000215586	88690	RN7SL547P	ENSG00000240584	106668	chr20:7742018-7742174,chr20:7742545-7742848	None
HUERSP1_20p12.3	HERV	HUERSP1	internal	chr20	7743299	7744288	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031679.1	ENSG00000215586	87510	RN7SL547P	ENSG00000240584	109448	chr20:7744280-7744653	None
ERVLB4_20p12.3c	HERV	ERVLB4	oneside	chr20	8836313	8839500	+	noncoding	PLCB1	protein_coding	SENSE	ENSG00000182621	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_20p12.2a	HERV	ERVLE	internal	chr20	9702686	9703768	-	noncoding	PAK5	protein_coding	SENSE	ENSG00000101349	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_20p12.2b	HERV	ERVLE	internal	chr20	10566057	10568417	-	noncoding	SLX4IP	protein_coding	ANTISENSE	ENSG00000149346	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr20:10566310-10566315
ERVLE_20p12.2c	HERV	ERVLE	internal	chr20	11098122	11100821	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049649.1	ENSG00000230990	133349	C20orf187	ENSG00000125899	68667	None	None
ERVLE_20p12.2d	HERV	ERVLE	internal	chr20	11671315	11672585	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGAM3P	ENSG00000237256	49838	AL161938.1	ENSG00000261411	12559	None	None
ERVL_20p12.2	HERV	ERVL	internal	chr20	11672591	11673893	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGAM3P	ENSG00000237256	51114	AL161938.1	ENSG00000261411	11251	None	None
HERVH_20p12.1a	HERV	HERVH	prototype	chr20	12340267	12345939	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PA2G4P2	ENSG00000235698	34117	AL109838.1	ENSG00000235292	22046	None	None
ERVLB4_20p12.1	HERV	ERVLB4	oneside	chr20	12603781	12606068	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01722	ENSG00000233048	259134	PA2G4P2	ENSG00000235698	222526	None	None
HERVH_20p12.1b	HERV	HERVH	prototype	chr20	12753820	12759634	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PA2G4P2	ENSG00000235698	372565	LINC01722	ENSG00000233048	105568	chr20:12753846-12754027	chr20:12754783-12754787,chr20:12757539-12757569,chr20:12754019-12754027
HERVH_20p12.1c	HERV	HERVH	prototype	chr20	13357880	13362689	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ISM1	ENSG00000101230	57229	AL121782.1	ENSG00000278153	5602	None	None
MER61_20p12.1	HERV	MER61	oneside	chr20	13951627	13953854	+	noncoding	SEL1L2	protein_coding	ANTISENSE	ENSG00000101251	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_20p12.1a	HERV	ERV316A3	prototype	chr20	14622866	14627590	+	noncoding	MACROD2,MACROD2-IT1	protein_coding,lncRNA	SENSE,SENSE	ENSG00000172264,ENSG00000227927	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_20p12.1d	HERV	HERVH	prototype	chr20	15147695	15153502	-	noncoding	MACROD2	protein_coding	ANTISENSE	ENSG00000172264	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_20p12.1	HERV	HARLEQUIN	prototype	chr20	15979869	15986246	-	noncoding	MACROD2,AL079338.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000172264,ENSG00000286546	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chr20:15981436-15981715	chr20:15986225-15986246,chr20:15985794-15985803,chr20:15986179-15986182
MER101_20p12.1a	HERV	MER101	internal	chr20	16077836	16078950	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161941.1	ENSG00000287410	98983	MACROD2	ENSG00000172264	24639	None	None
MER101_20p12.1b	HERV	MER101	internal	chr20	16079303	16081336	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161941.1	ENSG00000287410	96597	MACROD2	ENSG00000172264	26106	None	None
ERV316A3_20p12.1b	HERV	ERV316A3	internal	chr20	16861085	16861901	+	noncoding	AL121892.1	lncRNA	ANTISENSE	ENSG00000236985	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_20p12.1c	HERV	ERV316A3	oneside	chr20	16861973	16864107	+	noncoding	AL121892.1	lncRNA	ANTISENSE	ENSG00000236985	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_20p12.1	HERV	PRIMA4	internal	chr20	17068778	17069603	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031684.1	ENSG00000212165	85745	RNU6-27P	ENSG00000251955	117907	None	chr20:17069554-17069558
MER4_20p11.23	HERV	MER4	prototype	chr20	18323419	18329534	+	noncoding	AL049646.1	lncRNA	ANTISENSE	ENSG00000230010	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr20:18323788-18323789
ERVLE_20p11.23a	HERV	ERVLE	internal	chr20	18439079	18441376	-	noncoding	DZANK1	protein_coding	SENSE	ENSG00000089091	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_20p11.23a	HERV	HERVH	prototype	chr20	18517122	18522759	-	noncoding	SEC23B	protein_coding	ANTISENSE	ENSG00000101310	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_20p11.23a	HERV	ERVLB4	internal	chr20	19069865	19070467	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136090.2	ENSG00000287430	138185	AL135936.1	ENSG00000274863	13069	None	None
HERVH_20p11.23b	HERV	HERVH	prototype	chr20	19752049	19756776	-	noncoding	AL121761.1	lncRNA	SENSE	ENSG00000268628	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr20:19756458-19756816	None
ERV316A3_20p11.23a	HERV	ERV316A3	prototype	chr20	20821507	20824442	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPS11P1	ENSG00000225803	29679	RN7SL607P	ENSG00000278525	82776	None	None
ERVLE_20p11.23b	HERV	ERVLE	internal	chr20	20979578	20980495	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00237	ENSG00000225127	105081	AL133465.1	ENSG00000234104	7016	None	None
ERV316A3_20p11.23b	HERV	ERV316A3	oneside	chr20	21082214	21083365	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133465.1	ENSG00000234104	109652	LINC00237	ENSG00000225127	2211	None	None
ERVLB4_20p11.23b	HERV	ERVLB4	prototype	chr20	21298478	21300213	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL117332.1	ENSG00000275457	2518	ZNF877P	ENSG00000226875	32013	None	None
PRIMA41_20p11.22	HERV	PRIMA41	prototype	chr20	21651235	21657407	+	noncoding	LINC01727,LINC01726	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000279082,ENSG00000280350	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_20p11.21	HERV	ERVLE	internal	chr20	22876298	22877624	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYB5AP4	ENSG00000213882	8046	AL158175.1	ENSG00000283072	129307	None	None
MER4B_20p11.21	HERV	MER4B	internal	chr20	22963472	22965503	+	noncoding	AL353132.1	processed_pseudogene	ANTISENSE	ENSG00000228935	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_20p11.21	HERV	HML3	oneside	chr20	23466925	23473419	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL096677.1	ENSG00000273838	5718	CST12P	ENSG00000226344	2281	None	None
HERVL_20p11.21	HERV	HERVL	oneside	chr20	24019390	24021424	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POM121L3P	ENSG00000167390	28936	LINC01721	ENSG00000230133	41831	None	None
ERVLB4_20p11.21a	HERV	ERVLB4	oneside	chr20	24192401	24195929	+	noncoding	LINC01721	lncRNA	SENSE	ENSG00000230133	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_20p11.21b	HERV	ERVLB4	oneside	chr20	24326480	24331710	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP53	ENSG00000234069	113681	AL158090.1	ENSG00000232200	8394	None	None
HERVE_20p11.21a	HERV	HERVE	oneside	chr20	24919226	24921721	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL049594.1	ENSG00000231015	238235	AL035661.1	ENSG00000274173	10119	None	None
HERVE_20p11.21b	HERV	HERVE	oneside	chr20	24927945	24933027	+	noncoding	AL035661.1	lncRNA	SENSE	ENSG00000274173	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr20:24930442-24930447,chr20:24930603-24930624,chr20:24930631-24930674,chr20:24930675-24930697,chr20:24930700-24930708,chr20:24930710-24930717
ERVLB4_20p11.21c	HERV	ERVLB4	oneside	chr20	24937735	24942401	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CST7	ENSG00000077984	6868	AL035661.1	ENSG00000274173	4752	None	None
ERVLB4_20p11.21d	HERV	ERVLB4	internal	chr20	25124259	25128147	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL080312.1	ENSG00000225069	24331	AL035252.3	ENSG00000230725	11505	None	None
MER41_20p11.21a	HERV	MER41	oneside	chr20	25163526	25165633	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL035252.6	ENSG00000286472	19025	AL035252.2	ENSG00000225344	1465	None	None
MER41_20p11.21b	HERV	MER41	internal	chr20	25172422	25173065	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL035252.6	ENSG00000286472	11593	AL035252.2	ENSG00000225344	10361	None	None
HUERSP1_20p11.21	HERV	HUERSP1	oneside	chr20	25326233	25328103	+	noncoding	ABHD12	protein_coding	ANTISENSE	ENSG00000100997	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_20p11.21	HERV	HML6	prototype	chr20	25394133	25403271	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GINS1	ENSG00000101003	4402	ABHD12	ENSG00000100997	3298	None	None
MER4_20p11.21a	HERV	MER4	oneside	chr20	25635457	25640441	-	noncoding	ZNF337-AS1	lncRNA	ANTISENSE	ENSG00000213742	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_20p11.21b	HERV	MER4	insert*	chr20	25640680	25643684	-	noncoding	ZNF337-AS1	lncRNA	ANTISENSE	ENSG00000213742	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_20p11.21	HERV	ERV316A3	internal	chr20	25671515	25673906	-	noncoding	ZNF337-AS1,ZNF337	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000213742,ENSG00000130684	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
PABLB_20p11.1	HERV	PABLB	internal	chr20	25740120	25741406	-	noncoding	AL390198.1	lncRNA	ANTISENSE	ENSG00000226465	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_20p11.1	HERV	ERVLE	internal	chr20	25943356	25944986	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CFTRP1	ENSG00000228593	23675	LINC01733	ENSG00000226203	10809	None	None
PRIMA41_20q11.1a	HERV	PRIMA41	internal	chr20	29362746	29365741	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DUX4L34	ENSG00000282935	44607	DUX4L33	ENSG00000282894	37697	None	None
PRIMA41_20q11.1b	HERV	PRIMA41	internal	chr20	29372222	29374070	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DUX4L34	ENSG00000282935	36278	DUX4L33	ENSG00000282894	47173	None	None
ERVLE_20q11.1a	HERV	ERVLE	internal	chr20	29615371	29616801	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CFTRP2	ENSG00000282921	24977	ABBA01031669.1	ENSG00000283592	40200	None	None
PRIMA41_20q11.1c	HERV	PRIMA41	internal	chr20	29800258	29805865	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP532	ENSG00000283433	68194	CDC27P3	ENSG00000283005	52168	None	None
ERVLE_20q11.1b	HERV	ERVLE	internal	chr20	30239726	30241357	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CFTRP3	ENSG00000204555	24750	LINC01597	ENSG00000205611	37549	None	None
MER4_20q11.21	HERV	MER4	internal	chr20	30624841	30625822	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANKRD20A21P	ENSG00000277112	30211	AC018688.2	ENSG00000283443	73371	None	None
PRIMA41_20q11.21	HERV	PRIMA41	internal	chr20	30849760	30855867	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP528	ENSG00000275305	33486	DEFB115	ENSG00000215547	401797	None	None
ERVLE_20q11.21	HERV	ERVLE	internal	chr20	33263814	33266601	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BPIFA1	ENSG00000198183	20503	RPL12P3	ENSG00000233106	5661	None	None
HML2_20q11.22	HERV	HML2	prototype	chr20	34127754	34136578	+	noncoding	AL031668.2	lncRNA	SENSE	ENSG00000287853	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_20q11.22	HERV	HERVL40	oneside	chr20	34231890	34234436	-	noncoding	ASIP	protein_coding	ANTISENSE	ENSG00000101440	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_20q11.23a	HERV	HERVFRD	prototype	chr20	36967240	36971042	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBL1	ENSG00000080839	25307	SAMHD1	ENSG00000101347	15339	None	None
HERVFRD_20q11.23b	HERV	HERVFRD	internal	chr20	36982349	36987355	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SAMHD1	ENSG00000101347	30448	RBL1	ENSG00000080839	8994	None	None
HERVH_20q11.23	HERV	HERVH	prototype	chr20	38592396	38598799	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ARHGAP40	ENSG00000124143	3135	ADIG	ENSG00000182035	3933	None	None
ERV316A3_20q12a	HERV	ERV316A3	internal	chr20	39413394	39414308	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL680P	ENSG00000275337	64002	AL132981.1	ENSG00000286083	241017	None	None
LTR19_20q12a	HERV	LTR19	internal	chr20	39482540	39483717	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL680P	ENSG00000275337	133148	AL132981.1	ENSG00000286083	171608	None	None
LTR19_20q12b	HERV	LTR19	oneside	chr20	39486770	39489051	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL680P	ENSG00000275337	137378	AL132981.1	ENSG00000286083	166274	None	None
ERV316A3_20q12b	HERV	ERV316A3	oneside	chr20	39624402	39625925	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL680P	ENSG00000275337	275010	AL132981.1	ENSG00000286083	29400	None	None
HML3_20q12	HERV	HML3	prototype	chr20	39721012	39727144	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL132981.1	ENSG00000286083	57460	AL118523.1	ENSG00000229976	30058	None	None
HERVH_20q12a	HERV	HERVH	prototype	chr20	40093110	40099009	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133419.1	ENSG00000233415	49221	AL009050.1	ENSG00000223410	22032	None	None
HERVH_20q12b	HERV	HERVH	prototype	chr20	40269054	40274761	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL009050.1	ENSG00000223410	142697	MAFB	ENSG00000204103	411087	None	chr20:40271958-40271975,chr20:40272101-40272127
ERVLE_20q12	HERV	ERVLE	oneside	chr20	40488907	40491323	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAFB	ENSG00000204103	194525	AL009050.1	ENSG00000223410	362550	None	None
ERVLB4_20q12	HERV	ERVLB4	prototype	chr20	41794828	41797456	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049812.2	ENSG00000225458	193684	AL133229.1	ENSG00000212224	82228	None	None
ERVLE_20q13.12a	HERV	ERVLE	internal	chr20	43778522	43779783	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GTSF1L	ENSG00000124196	51520	RNU6-639P	ENSG00000206801	16654	None	None
ERVLE_20q13.12b	HERV	ERVLE	internal	chr20	44281659	44289339	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FITM2	ENSG00000197296	13501	GDAP1L1	ENSG00000124194	742	None	None
MER101_20q13.12	HERV	MER101	internal	chr20	44668371	44670228	+	noncoding	AL139352.1	lncRNA	ANTISENSE	ENSG00000132832	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_20q13.12a	HERV	HERVH	prototype	chr20	44670229	44676774	+	noncoding	AL139352.1	lncRNA	ANTISENSE	ENSG00000132832	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr20:44671726-44671763,chr20:44674007-44674011
ERVLB4_20q13.12a	HERV	ERVLB4	internal	chr20	45087483	45090911	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STK4	ENSG00000101109	7462	KCNS1	ENSG00000124134	303	None	None
HERVL_20q13.12	HERV	HERVL	oneside	chr20	45139878	45142975	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PI3	ENSG00000124102	31927	AL049767.1	ENSG00000283142	902	None	None
MER4B_20q13.12	HERV	MER4B	oneside	chr20	45437429	45440604	+	coding	PIGT,AL031663.3	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000124155,ENSG00000277022	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_20q13.12	HERV	MER41	oneside	chr20	45482970	45489460	-	coding	AL031663.2	lncRNA	ANTISENSE	ENSG00000237464	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr20:45488982-45489265	None
ERVLB4_20q13.12b	HERV	ERVLB4	prototype	chr20	45519890	45522646	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EPPIN-WFDC6	ENSG00000249139	11550	SPINT3	ENSG00000101446	4268	chr20:45521512-45521611	None
HERVH_20q13.12b	HERV	HERVH	oneside	chr20	45584245	45588141	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	WFDC9	ENSG00000180205	19798	WFDC8	ENSG00000158901	4919	None	None
ERVLE_20q13.12c	HERV	ERVLE	internal	chr20	45740172	45742994	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA1P3	ENSG00000226188	2743	SPINT4	ENSG00000149651	14342	None	None
HERVH_20q13.12c	HERV	HERVH	prototype	chr20	45759334	45765245	+	coding	WFDC3	protein_coding	ANTISENSE	ENSG00000124116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_20q13.12d	HERV	ERVLE	internal	chr20	46423989	46424578	-	noncoding	ELMO2,ZNF663P	protein_coding,transcribed_unitary_pseudogene	SENSE,SENSE	ENSG00000062598,ENSG00000215452	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_20q13.12	HERV	ERV316A3	internal	chr20	46432835	46435517	-	noncoding	ELMO2,ZNF663P	protein_coding,transcribed_unitary_pseudogene	SENSE,SENSE	ENSG00000062598,ENSG00000215452	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr20:46433270-46433280,chr20:46433290-46433297,chr20:46433368-46433381,chr20:46433390-46433405,chr20:46433576-46433586,chr20:46433594-46433626,chr20:46433637-46433649,chr20:46433651-46433661,chr20:46433002-46433007,chr20:46433056-46433070,chr20:46433093-46433104,chr20:46433107-46433124,chr20:46433129-46433132,chr20:46433210-46433219
HERVIP10FH_20q13.12	HERV	HERVIP10FH	oneside	chr20	47520090	47521780	-	noncoding	NCOA3	protein_coding	ANTISENSE	ENSG00000124151	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_20q13.13	HERV	ERVLB4	internal	chr20	48611470	48613023	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PREX1	ENSG00000124126	11229	RNU7-144P	ENSG00000238452	117161	None	None
MER4_20q13.13	HERV	MER4	unknown	chr20	49550311	49558044	+	noncoding	PTGIS	protein_coding	ANTISENSE	ENSG00000124212	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_20q13.13	HERV	MER101	oneside	chr20	49960039	49962972	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT18P4	ENSG00000229222	2007	RNU6-147P	ENSG00000206710	9134	None	None
ERVLB4_20q13.2	HERV	ERVLB4	oneside	chr20	54817566	54819424	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DOK5	ENSG00000101134	166397	RNU4ATAC7P	ENSG00000252089	40264	None	None
HERVW_20q13.2	HERV	HERVW	oneside	chr20	55348967	55353051	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL12P4	ENSG00000185834	273827	LINC01440	ENSG00000235166	55847	None	None
ERV316A3_20q13.2	HERV	ERV316A3	oneside	chr20	56026476	56028361	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP487	ENSG00000222118	176691	CBLN4	ENSG00000054803	20957	None	None
ERVLE_20q13.32a	HERV	ERVLE	internal	chr20	58383829	58385116	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAB22A	ENSG00000124209	16322	VAPB	ENSG00000124164	4113	None	None
HERVL_20q13.32	HERV	HERVL	oneside	chr20	58757673	58758406	-	coding	PIEZO1P2	unprocessed_pseudogene	SENSE	ENSG00000237121	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_20q13.32b	HERV	ERVLE	internal	chr20	59171675	59173741	-	noncoding	ZNF831	protein_coding	ANTISENSE	ENSG00000124203	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_20q13.32a	HERV	ERV316A3	oneside	chr20	59367431	59369987	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL160410.1	ENSG00000286309	25509	AL035250.2	ENSG00000230352	2658	None	None
ERV316A3_20q13.32b	HERV	ERV316A3	oneside	chr20	59439319	59441143	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL160410.1	ENSG00000286309	42210	PIEZO1P1	ENSG00000233686	19476	None	None
HARLEQUIN_20q13.32	HERV	HARLEQUIN	oneside	chr20	59551577	59557922	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PHACTR3	ENSG00000087495	19587	AL389889.1	ENSG00000227282	35538	None	None
ERVLE_20q13.33a	HERV	ERVLE	internal	chr20	60126398	60128302	-	noncoding	MIR646HG	lncRNA	ANTISENSE	ENSG00000228340	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV4_20q13.33a	HERV	HERV4	internal	chr20	60282197	60284816	+	coding	MIR646HG	lncRNA	SENSE	ENSG00000228340	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV4_20q13.33b	HERV	HERV4	oneside	chr20	60284995	60287337	+	noncoding	MIR646HG	lncRNA	SENSE	ENSG00000228340	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_20q13.33a	HERV	HERVIP10FH	oneside	chr20	61188476	61191053	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDH4	ENSG00000179242	61208	LINC01718	ENSG00000229606	104726	None	None
HERVIP10FH_20q13.33b	HERV	HERVIP10FH	internal	chr20	61191606	61192917	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDH4	ENSG00000179242	59344	LINC01718	ENSG00000229606	107856	None	None
ERV316A3_20q13.33a	HERV	ERV316A3	oneside	chr20	62222348	62224463	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HRH3	ENSG00000101180	2070	OSBPL2	ENSG00000130703	7459	None	None
ERVLE_20q13.33b	HERV	ERVLE	internal	chr20	62873312	62876267	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARF4P2	ENSG00000236527	236	DIDO1	ENSG00000101191	1471	chr20:62874236-62874528,chr20:62875593-62875803	None
PRIMA41_20q13.33	HERV	PRIMA41	internal	chr20	63011048	63012270	+	noncoding	LINC01749	lncRNA	SENSE	ENSG00000272259	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_20q13.33b	HERV	ERV316A3	internal	chr20	63702999	63704689	+	noncoding	ARFRP1	protein_coding	ANTISENSE	ENSG00000101246	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_21p12a	HERV	HERVL40	internal	chr21	5594737	5595412	-	noncoding	CU633967.1	lncRNA	ANTISENSE	ENSG00000274333	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL66_21p12a	HERV	HERVL66	prototype	chr21	5621221	5625042	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FP236315.2	ENSG00000279186	78140	CU633967.1	ENSG00000274333	6341	None	None
HERVL66_21p12b	HERV	HERVL66	prototype	chr21	5684294	5688115	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FP236315.2	ENSG00000279186	15067	CU633967.1	ENSG00000274333	69414	None	None
HERVL40_21p12b	HERV	HERVL40	internal	chr21	5737699	5739455	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CU639417.1	ENSG00000274559	233469	FP236315.1	ENSG00000279064	28243	None	None
HERVL66_21p12c	HERV	HERVL66	oneside	chr21	5763495	5764988	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FP236315.1	ENSG00000279064	54039	CU639417.1	ENSG00000274559	207936	None	None
ERVLB4_21p12a	HERV	ERVLB4	internal	chr21	5793698	5794444	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CU639417.1	ENSG00000274559	178480	FP236315.1	ENSG00000279064	84242	None	None
HERVL40_21p12c	HERV	HERVL40	internal	chr21	5858283	5860039	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CU639417.1	ENSG00000274559	112885	FP236315.1	ENSG00000279064	148827	None	None
HERVL66_21p12d	HERV	HERVL66	oneside	chr21	5884079	5885572	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FP236315.1	ENSG00000279064	174623	CU639417.1	ENSG00000274559	87352	None	None
ERVLB4_21p12b	HERV	ERVLB4	internal	chr21	5914282	5915028	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CU639417.1	ENSG00000274559	57896	FP236315.1	ENSG00000279064	204826	None	None
HERVL40_21p12d	HERV	HERVL40	internal	chr21	6225558	6226219	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CU633906.1	ENSG00000274790	1978	CU633906.2	ENSG00000275496	2747	None	None
ERV316A3_21p12	HERV	ERV316A3	internal	chr21	6849041	6849789	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FP475955.3	ENSG00000279998	36744	FP475955.1	ENSG00000278955	8750	None	None
HERVL40_21p11.2a	HERV	HERVL40	internal	chr21	7089963	7090638	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CU634019.1	ENSG00000274046	1978	CU634019.2	ENSG00000277067	2734	None	None
HERVL66_21p11.2a	HERV	HERVL66	prototype	chr21	7116447	7120268	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTBP2P10	ENSG00000280330	8835	CU634019.1	ENSG00000274046	23731	None	None
HERVL40_21p11.2b	HERV	HERVL40	internal	chr21	7471741	7472416	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CU633904.1	ENSG00000274484	1978	CU633904.2	ENSG00000276077	2734	None	None
HERVL66_21p11.2b	HERV	HERVL66	oneside	chr21	7498225	7500890	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTBP2P9	ENSG00000279177	125454	CU633904.1	ENSG00000274484	23731	None	None
HERVL66_21p11.2c	HERV	HERVL66	oneside	chr21	7559489	7560982	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTBP2P9	ENSG00000279177	65362	CU633904.1	ENSG00000274484	84995	None	None
HERVL40_21p11.2c	HERV	HERVL40	internal	chr21	7585022	7586778	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CU633904.1	ENSG00000274484	110528	CTBP2P9	ENSG00000279177	39566	None	None
HERVL66_21p11.2d	HERV	HERVL66	prototype	chr21	7636363	7640184	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTBP2P9	ENSG00000279177	8835	FP236241.1	ENSG00000276546	23727	None	None
HERVL40_21p11.2d	HERV	HERVL40	internal	chr21	7665989	7666664	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FP236241.1	ENSG00000276546	1978	FP236241.2	ENSG00000277991	2733	None	None
HERVL40_21p11.2e	HERV	HERVL40	internal	chr21	8135769	8137525	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FP671120.5	ENSG00000278996	60095	FP671120.6	ENSG00000279967	32063	None	None
HERVL66_21p11.2e	HERV	HERVL66	oneside	chr21	8161565	8163058	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FP671120.6	ENSG00000279967	57859	FP671120.5	ENSG00000278996	34562	None	None
ERVLB4_21p11.2a	HERV	ERVLB4	internal	chr21	8191768	8192514	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FP671120.5	ENSG00000278996	5106	FP671120.6	ENSG00000279967	88062	None	None
HERVL40_21p11.2f	HERV	HERVL40	internal	chr21	8318814	8320570	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FP236383.3	ENSG00000280441	60073	FP671120.4	ENSG00000277739	61881	None	None
HERVL66_21p11.2f	HERV	HERVL66	oneside	chr21	8344610	8346103	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FP671120.4	ENSG00000277739	87677	FP236383.3	ENSG00000280441	34540	None	None
ERVLB4_21p11.2b	HERV	ERVLB4	internal	chr21	8374813	8375559	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FP236383.3	ENSG00000280441	5084	FP671120.4	ENSG00000277739	117880	None	None
HERVL_21p11.2	HERV	HERVL	oneside	chr21	8703256	8706715	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01666	ENSG00000279579	52362	CR381572.1	ENSG00000279167	1694	None	None
HML3_21p11.2a	HERV	HML3	oneside	chr21	9150476	9154294	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CR381653.1	ENSG00000278932	170719	TEKT4P2	ENSG00000188681	20724	None	None
HML1_21p11.2a	HERV	HML1	oneside	chr21	9154295	9156353	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CR381653.1	ENSG00000278932	168660	TEKT4P2	ENSG00000188681	24543	None	None
HML1_21p11.2b	HERV	HML1	oneside	chr21	9298495	9300556	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TEKT4P2	ENSG00000188681	168743	CR381653.1	ENSG00000278932	24457	None	None
HML3_21p11.2b	HERV	HML3	oneside	chr21	9300557	9304363	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TEKT4P2	ENSG00000188681	170805	CR381653.1	ENSG00000278932	20650	None	None
HERVL32_21p11.2	HERV	HERVL32	prototype	chr21	9749613	9752534	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01667	ENSG00000280081	29376	AC124864.4	ENSG00000286103	69707	None	None
HERVH_21p11.2	HERV	HERVH	prototype	chr21	9847516	9850363	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01667	ENSG00000280081	9505	RN7SL52P	ENSG00000264002	51981	None	None
LTR25_21p11.2	HERV	LTR25	internal	chr21	9944264	9949759	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CR382285.1	ENSG00000270533	25258	AC018692.2	ENSG00000279321	29418	None	None
ERVLE_21p11.2	HERV	ERVLE	internal	chr21	10330456	10332299	-	noncoding	AP003900.1,EIF3FP1	lncRNA,processed_pseudogene	SENSE,ANTISENSE	ENSG00000277693,ENSG00000275945	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_21q11.2a	HERV	ERV316A3	oneside	chr21	13004717	13005970	-	noncoding	AP001464.1	lncRNA	SENSE	ENSG00000229306	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_21q11.2b	HERV	ERV316A3	internal	chr21	13006024	13007231	-	noncoding	AP001464.1	lncRNA	SENSE	ENSG00000229306	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_21q11.2a	HERV	HERVIP10F	prototype	chr21	13051962	13060559	+	coding	ANKRD30BP2	transcribed_unprocessed_pseudogene	SENSE	ENSG00000224309	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr21:13060465-13060470
HERVL_21q11.2	HERV	HERVL	prototype	chr21	13323434	13329898	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FGF7P2	ENSG00000185390	19367	AJ239318.1	ENSG00000280108	8490	None	None
ERVLB4_21q11.2	HERV	ERVLB4	prototype	chr21	13330724	13332975	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FGF7P2	ENSG00000185390	16290	AJ239318.1	ENSG00000280108	15780	None	None
HERVIP10F_21q11.2b	HERV	HERVIP10F	oneside	chr21	13538460	13542354	-	noncoding	LINC01674	lncRNA	ANTISENSE	ENSG00000228159	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_21q11.2	HERV	MER4	internal	chr21	13646305	13647252	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3118-1	ENSG00000266299	1455	AL050303.2	ENSG00000278381	6821	None	None
ERVLE_21q11.2	HERV	ERVLE	internal	chr21	13714065	13714813	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LONRF2P5	ENSG00000273692	8547	MIR8069-2	ENSG00000278618	9376	None	None
HUERSP1_21q11.2	HERV	HUERSP1	oneside	chr21	14807788	14810306	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP16	ENSG00000225502	32526	AF127577.4	ENSG00000235609	8537	None	None
HERVL_21q21.1a	HERV	HERVL	prototype	chr21	15576516	15583085	+	noncoding	AJ009632.2	lncRNA	ANTISENSE	ENSG00000229425	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_21q21.1b	HERV	HERVL	oneside	chr21	15633992	15637297	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAD23BP3	ENSG00000226298	57003	AJ009632.2	ENSG00000229425	6650	None	None
HERVL40_21q21.1a	HERV	HERVL40	internal	chr21	15780821	15781416	-	noncoding	USP25	protein_coding	ANTISENSE	ENSG00000155313	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_21q21.1a	HERV	HERVH	prototype	chr21	15979610	15985359	-	noncoding	MIR99AHG	lncRNA	ANTISENSE	ENSG00000215386	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr21:15985007-15985009
HERVH_21q21.1b	HERV	HERVH	prototype	chr21	16391958	16398534	-	noncoding	MIR99AHG	lncRNA	ANTISENSE	ENSG00000215386	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_21q21.1a	HERV	ERV316A3	oneside	chr21	16806462	16808102	+	noncoding	AF130359.1	lncRNA	ANTISENSE	ENSG00000237735	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr21:16806523-16806548,chr21:16807389-16807414,chr21:16807476-16807479,chr21:16807721-16807739,chr21:16807743-16807760,chr21:16807807-16807811
ERV316A3_21q21.1b	HERV	ERV316A3	internal	chr21	16826585	16827989	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF130359.1	ENSG00000237735	10897	AF212831.1	ENSG00000232886	34886	None	None
HERVH_21q21.1c	HERV	HERVH	prototype	chr21	16892210	16898240	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF212831.1	ENSG00000232886	18519	NEK4P1	ENSG00000225735	312229	chr21:16894676-16894839	chr21:16894676-16894685
ERVLE_21q21.1a	HERV	ERVLE	internal	chr21	16908066	16909251	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NEK4P1	ENSG00000225735	301218	AF212831.1	ENSG00000232886	34375	None	None
HERVH_21q21.1d	HERV	HERVH	prototype	chr21	16914128	16919898	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF212831.1	ENSG00000232886	40437	NEK4P1	ENSG00000225735	290571	None	None
ERVLE_21q21.1b	HERV	ERVLE	internal	chr21	16932325	16933112	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NEK4P1	ENSG00000225735	277357	AF212831.1	ENSG00000232886	58634	None	None
HERVH_21q21.1e	HERV	HERVH	prototype	chr21	17121441	17127757	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF212831.1	ENSG00000232886	247750	NEK4P1	ENSG00000225735	82712	None	None
HERV9_21q21.1	HERV	HERV9	prototype	chr21	17296932	17306851	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP000457.1	ENSG00000278181	336	RNU6-113P	ENSG00000252462	124696	None	None
HERVL_21q21.1c	HERV	HERVL	prototype	chr21	17339489	17342978	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-113P	ENSG00000252462	88569	AP000457.1	ENSG00000278181	42893	None	None
ERVLE_21q21.1c	HERV	ERVLE	internal	chr21	17357900	17362433	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-113P	ENSG00000252462	69114	AP000457.1	ENSG00000278181	61304	None	None
ERVLE_21q21.1d	HERV	ERVLE	internal	chr21	17858749	17862749	+	noncoding	CHODL-AS1	lncRNA	ANTISENSE	ENSG00000231755	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_21q21.1a	HERV	ERVL	oneside	chr21	17869475	17870791	-	noncoding	CHODL-AS1	lncRNA	SENSE	ENSG00000231755	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_21q21.1a	HERV	ERVLB4	oneside	chr21	17870787	17875770	-	noncoding	CHODL-AS1	lncRNA	SENSE	ENSG00000231755	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_21q21.1e	HERV	ERVLE	internal	chr21	18105730	18108406	+	noncoding	CHODL,AF130417.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000154645,ENSG00000227330	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_21q21.1	HERV	HML2	prototype	chr21	18561341	18569644	-	noncoding	MIR548XHG	lncRNA	SENSE	ENSG00000224141	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_21q21.1b	HERV	ERVLB4	oneside	chr21	18688509	18690835	+	noncoding	MIR548XHG	lncRNA	ANTISENSE	ENSG00000224141	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_21q21.1	HERV	HERVW	prototype	chr21	18752744	18760548	-	noncoding	MIR548XHG	lncRNA	SENSE	ENSG00000224141	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr21:18759798-18759830
HERVL_21q21.1d	HERV	HERVL	oneside	chr21	18808434	18809750	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548XHG	ENSG00000224141	48114	PPIAP22	ENSG00000198618	48029	None	None
ERV316A3_21q21.1c	HERV	ERV316A3	internal	chr21	18923280	18923833	-	noncoding	AL157359.2	lncRNA	SENSE	ENSG00000232193	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_21q21.1	HERV	MER4B	internal	chr21	18989211	18989923	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000431.2	ENSG00000235965	56387	AL157359.1	ENSG00000226204	22153	None	None
ERVLE_21q21.1f	HERV	ERVLE	unknown	chr21	19145706	19149492	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC6A6P1	ENSG00000226818	95051	AP000431.1	ENSG00000229289	11283	None	None
HERVL40_21q21.1b	HERV	HERVL40	oneside	chr21	19185392	19189426	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC6A6P1	ENSG00000226818	55117	AP000431.1	ENSG00000229289	50969	None	None
HUERSP3B_21q21.1	HERV	HUERSP3B	prototype	chr21	19679015	19683306	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NIPA2P3	ENSG00000271486	57470	SREK1IP1P1	ENSG00000229336	56403	None	None
ERVLE_21q21.1g	HERV	ERVLE	internal	chr21	19696833	19702199	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SREK1IP1P1	ENSG00000229336	37510	NIPA2P3	ENSG00000271486	75288	None	None
ERVLE_21q21.1h	HERV	ERVLE	internal	chr21	19826374	19828652	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C1QBPP1	ENSG00000215353	66246	LINC01683	ENSG00000233480	64461	None	None
HERVEA_21q21.1	HERV	HERVEA	prototype	chr21	19995182	20000184	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02573	ENSG00000233236	256568	LINC01683	ENSG00000233480	95139	chr21:19997747-19997995	chr21:19995286-19995290,chr21:19999808-19999847,chr21:19999925-19999936
HERVL_21q21.1e	HERV	HERVL	oneside	chr21	20102058	20104865	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01683	ENSG00000233480	202015	LINC02573	ENSG00000233236	151887	None	chr21:20102179-20102205,chr21:20102271-20102282,chr21:20102308-20102311,chr21:20102349-20102358
ERVLE_21q21.1i	HERV	ERVLE	internal	chr21	20123030	20124218	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02573	ENSG00000233236	132534	LINC01683	ENSG00000233480	222987	None	None
ERV316A3_21q21.1d	HERV	ERV316A3	oneside	chr21	20419334	20422740	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT18P2	ENSG00000234439	2209	FDPSP6	ENSG00000233676	30489	None	None
HERVL40_21q21.1c	HERV	HERVL40	prototype	chr21	20729449	20732394	-	noncoding	LINC00320	lncRNA	SENSE	ENSG00000224924	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_21q21.1e	HERV	ERV316A3	oneside	chr21	20737691	20740161	+	noncoding	LINC00320	lncRNA	ANTISENSE	ENSG00000224924	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER61_21q21.1a	HERV	MER61	oneside	chr21	20775617	20778015	-	noncoding	LINC00320	lncRNA	SENSE	ENSG00000224924	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER61_21q21.1b	HERV	MER61	unknown	chr21	20778071	20781214	-	noncoding	LINC00320	lncRNA	SENSE	ENSG00000224924	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER61_21q21.1c	HERV	MER61	internal	chr21	20781283	20781840	-	noncoding	LINC00320	lncRNA	SENSE	ENSG00000224924	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_21q21.1c	HERV	ERVLB4	internal	chr21	21548632	21550313	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001117.1	ENSG00000234730	16450	NCAM2	ENSG00000154654	5303	None	None
ERVL_21q21.1b	HERV	ERVL	internal	chr21	21967658	21968900	-	noncoding	AP000472.1	lncRNA	SENSE	ENSG00000227075	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_21q21.1f	HERV	HERVL	prototype	chr21	22011484	22018238	-	coding	LINC01687	lncRNA	SENSE	ENSG00000233215	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_21q21.1f	HERV	ERV316A3	oneside	chr21	22032698	22035130	-	coding	LINC01687	lncRNA	SENSE	ENSG00000233215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_21q21.1g	HERV	ERV316A3	oneside	chr21	22042183	22043409	-	noncoding	LINC01687	lncRNA	SENSE	ENSG00000233215	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_21q21.1a	HERV	HUERSP2	internal	chr21	22120231	22120753	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000705.2	ENSG00000234340	13945	LINC00308	ENSG00000184856	3626	None	None
HUERSP2_21q21.1b	HERV	HUERSP2	oneside	chr21	22120754	22124004	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00308	ENSG00000184856	4149	AP000705.2	ENSG00000234340	10694	None	None
ERVL_21q21.1c	HERV	ERVL	oneside	chr21	22233868	22237257	+	noncoding	AP000561.1	lncRNA	SENSE	ENSG00000226043	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_21q21.1j	HERV	ERVLE	internal	chr21	22441301	22442107	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000959.1	ENSG00000234034	58497	MAPK6P2	ENSG00000223488	2952	None	None
MER61_21q21.1d	HERV	MER61	oneside	chr21	22519922	22521445	+	noncoding	AP000959.1	lncRNA	ANTISENSE	ENSG00000234034	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_21q21.2a	HERV	MER4	internal	chr21	22605806	22609121	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP000949.1	ENSG00000225906	273461	AP000959.1	ENSG00000234034	85748	None	None
MER4_21q21.2b	HERV	MER4	oneside	chr21	22609374	22611137	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000949.1	ENSG00000225906	271445	AP000959.1	ENSG00000234034	89316	None	None
MER101_21q21.2a	HERV	MER101	oneside	chr21	22726761	22728695	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000949.1	ENSG00000225906	153887	AP000959.1	ENSG00000234034	206703	None	None
ERVLE_21q21.2a	HERV	ERVLE	internal	chr21	22769060	22769701	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000949.1	ENSG00000225906	112881	AP000959.1	ENSG00000234034	249002	None	None
MER61_21q21.2	HERV	MER61	prototype	chr21	22842834	22848544	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000949.1	ENSG00000225906	34038	AP000959.1	ENSG00000234034	322776	None	None
LTR25_21q21.2	HERV	LTR25	internal	chr21	22845983	22847501	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000949.1	ENSG00000225906	35081	AP000959.1	ENSG00000234034	325925	None	None
ERV316A3_21q21.2a	HERV	ERV316A3	internal	chr21	22936597	22937639	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001116.1	ENSG00000230972	127852	AP000949.1	ENSG00000225906	52597	None	None
MER4_21q21.2c	HERV	MER4	oneside	chr21	23139069	23142550	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU2-55P	ENSG00000223078	139186	AP001116.1	ENSG00000230972	7863	None	None
MER4_21q21.2d	HERV	MER4	oneside	chr21	23142795	23146275	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU2-55P	ENSG00000223078	135461	AP001116.1	ENSG00000230972	11589	None	None
ERVLE_21q21.2b	HERV	ERVLE	internal	chr21	23224070	23225710	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001116.1	ENSG00000230972	92864	RNU2-55P	ENSG00000223078	56026	None	None
ERV316A3_21q21.2b	HERV	ERV316A3	internal	chr21	23316077	23319336	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000459.3	ENSG00000228592	33593	RNU2-55P	ENSG00000223078	34168	None	None
MER101_21q21.2b	HERV	MER101	internal	chr21	23451495	23452335	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000459.2	ENSG00000227716	25306	AP000459.1	ENSG00000199698	19213	None	None
LTR57_21q21.2	HERV	LTR57	internal	chr21	23453632	23455296	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000459.2	ENSG00000227716	22345	AP000459.1	ENSG00000199698	21350	None	None
ERVLE_21q21.2c	HERV	ERVLE	internal	chr21	23507311	23509535	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000961.1	ENSG00000288094	194725	AP000459.2	ENSG00000227716	16587	None	None
ERVLE_21q21.2d	HERV	ERVLE	internal	chr21	23532642	23535042	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000961.1	ENSG00000288094	169218	AP000459.2	ENSG00000227716	41918	None	None
ERVLB4_21q21.2a	HERV	ERVLB4	oneside	chr21	23612704	23614308	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000961.1	ENSG00000288094	89952	AP000459.2	ENSG00000227716	121980	None	None
ERV316A3_21q21.2c	HERV	ERV316A3	oneside	chr21	23751700	23752849	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000474.2	ENSG00000287612	104232	AP000961.1	ENSG00000288094	42355	None	None
ERV316A3_21q21.2d	HERV	ERV316A3	internal	chr21	23896824	23901268	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000474.1	ENSG00000231986	6283	AP000477.2	ENSG00000235564	59301	None	None
ERV316A3_21q21.2e	HERV	ERV316A3	oneside	chr21	23902225	23904756	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000474.1	ENSG00000231986	11684	AP000477.2	ENSG00000235564	55813	None	None
ERVLE_21q21.2e	HERV	ERVLE	internal	chr21	23938298	23940960	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000474.1	ENSG00000231986	47757	AP000477.2	ENSG00000235564	19609	None	None
HERVL18_21q21.2	HERV	HERVL18	oneside	chr21	23963392	23969659	-	noncoding	AP000477.2	lncRNA	SENSE	ENSG00000235564	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_21q21.2f	HERV	ERV316A3	oneside	chr21	24072644	24076040	-	noncoding	AP000477.3	lncRNA	SENSE	ENSG00000287801	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_21q21.2	HERV	MER41	oneside	chr21	24416102	24417381	+	noncoding	LINC01684	lncRNA	SENSE	ENSG00000237484	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_21q21.2g	HERV	ERV316A3	oneside	chr21	24438073	24441244	+	noncoding	LINC01684	lncRNA	SENSE	ENSG00000237484	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_21q21.2f	HERV	ERVLE	internal	chr21	24563136	24565093	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01692	ENSG00000226983	275457	LINC01684	ENSG00000237484	15194	None	None
ERVLB4_21q21.2b	HERV	ERVLB4	prototype	chr21	24631024	24634410	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01692	ENSG00000226983	206140	LINC01684	ENSG00000237484	83082	None	None
ERV316A3_21q21.2h	HERV	ERV316A3	oneside	chr21	24764110	24764815	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01684	ENSG00000237484	216168	LINC01692	ENSG00000226983	75735	None	None
HERVL40_21q21.2	HERV	HERVL40	oneside	chr21	24851265	24853161	+	noncoding	LINC01692	lncRNA	SENSE	ENSG00000226983	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_21q21.2	HERV	HUERSP3	internal	chr21	24991755	24995097	+	noncoding	LINC01692,AP000146.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000226983,ENSG00000230379	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_21q21.2c	HERV	ERVLB4	oneside	chr21	25025452	25029000	+	noncoding	LINC01692	lncRNA	SENSE	ENSG00000226983	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_21q21.3a	HERV	ERVLB4	oneside	chr21	25619064	25620792	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	JAM2	ENSG00000154721	18466	MRPL39	ENSG00000154719	11547	None	None
ERVLB4_21q21.3b	HERV	ERVLB4	internal	chr21	25620851	25622818	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	JAM2	ENSG00000154721	16440	MRPL39	ENSG00000154719	13334	None	None
HERVH_21q21.3a	HERV	HERVH	prototype	chr21	26227879	26233487	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001595.2	ENSG00000286902	83903	AP000229.1	ENSG00000273492	10498	None	None
ERVLB4_21q21.3c	HERV	ERVLB4	internal	chr21	26609900	26611288	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYYR1	ENSG00000166265	36614	ADAMTS1	ENSG00000154734	224467	None	None
MER4B_21q21.3a	HERV	MER4B	internal	chr21	26688806	26689646	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADAMTS1	ENSG00000154734	146109	CYYR1	ENSG00000166265	115520	None	None
ERV316A3_21q21.3a	HERV	ERV316A3	oneside	chr21	26740457	26741930	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADAMTS1	ENSG00000154734	93825	CYYR1	ENSG00000166265	167171	None	None
ERVLE_21q21.3a	HERV	ERVLE	internal	chr21	26756508	26759501	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADAMTS1	ENSG00000154734	76254	CYYR1	ENSG00000166265	183222	None	None
HERVW_21q21.3	HERV	HERVW	prototype	chr21	26854437	26862006	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADAMTS1	ENSG00000154734	9028	AP001599.1	ENSG00000223563	27370	None	chr21:26854662-26854681
MER4B_21q21.3b	HERV	MER4B	internal	chr21	27038843	27040543	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADAMTS5	ENSG00000154736	71755	GPX1P2	ENSG00000215326	102801	None	None
HERVL_21q21.3a	HERV	HERVL	prototype	chr21	27051910	27059110	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADAMTS5	ENSG00000154736	84822	GPX1P2	ENSG00000215326	84234	chr21:27057646-27057886	None
HERVL_21q21.3b	HERV	HERVL	oneside	chr21	27316674	27320573	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001605.1	ENSG00000231236	38312	GPX1P2	ENSG00000215326	172725	None	None
ERV316A3_21q21.3b	HERV	ERV316A3	internal	chr21	27365626	27366597	-	noncoding	AP001605.1,AP001604.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000231236,ENSG00000236332	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_21q21.3c	HERV	ERV316A3	oneside	chr21	27368499	27370523	-	noncoding	AP001605.1,AP001604.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000231236,ENSG00000236332	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_21q21.3c	HERV	HERVL	oneside	chr21	27409512	27411536	-	noncoding	AP001605.1	lncRNA	SENSE	ENSG00000231236	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_21q21.3	HERV	HERVFRD	prototype	chr21	27721679	27727559	-	noncoding	LINC00113	lncRNA	ANTISENSE	ENSG00000225298	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_21q21.3d	HERV	ERV316A3	internal	chr21	27801320	27801966	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00113	ENSG00000225298	50087	AJ006995.1	ENSG00000234083	152956	None	None
HERVL_21q21.3d	HERV	HERVL	oneside	chr21	28027247	28029958	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00314	ENSG00000178457	4014	LINC01697	ENSG00000232079	18446	None	None
HERVL_21q21.3e	HERV	HERVL	oneside	chr21	28037098	28040885	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01697	ENSG00000232079	7519	LINC00314	ENSG00000178457	13865	None	None
ERVLB4_21q21.3d	HERV	ERVLB4	prototype	chr21	28041568	28043841	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01697	ENSG00000232079	4563	LINC00314	ENSG00000178457	18335	None	None
HERVH_21q21.3b	HERV	HERVH	prototype	chr21	28161434	28166924	+	noncoding	LINC01695	lncRNA	ANTISENSE	ENSG00000236532	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_21q21.3f	HERV	HERVL	prototype	chr21	28217652	28220519	-	noncoding	LINC01695	lncRNA	SENSE	ENSG00000236532	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_21q21.3b	HERV	ERVLE	internal	chr21	28241577	28242260	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01695	ENSG00000236532	12910	AF165147.1	ENSG00000232855	86478	None	None
HERVL_21q21.3g	HERV	HERVL	prototype	chr21	28300934	28307279	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01695	ENSG00000236532	72267	AF165147.1	ENSG00000232855	21459	None	None
HERVL18_21q21.3	HERV	HERVL18	prototype	chr21	28393337	28396827	+	noncoding	AF165147.1	lncRNA	ANTISENSE	ENSG00000232855	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr21:28393373-28393688	chr21:28393373-28393417
ERV316A3_21q21.3e	HERV	ERV316A3	oneside	chr21	28455897	28457203	-	noncoding	AF165147.1	lncRNA	SENSE	ENSG00000232855	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_21q21.3a	HERV	MER101	internal	chr21	28498312	28498820	+	noncoding	AF165147.1	lncRNA	ANTISENSE	ENSG00000232855	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_21q21.3b	HERV	MER101	internal	chr21	28498843	28499994	+	noncoding	AF165147.1	lncRNA	ANTISENSE	ENSG00000232855	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_21q21.3c	HERV	MER101	oneside	chr21	28567188	28570173	+	noncoding	AF165147.1	lncRNA	ANTISENSE	ENSG00000232855	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_21q21.3h	HERV	HERVL	prototype	chr21	28850730	28854926	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	N6AMT1	ENSG00000156239	17265	AF207955.1	ENSG00000283300	107439	None	None
HERVL_21q21.3i	HERV	HERVL	prototype	chr21	28860058	28863503	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF207955.1	ENSG00000283300	116767	N6AMT1	ENSG00000156239	8688	None	None
ERVLB4_21q21.3e	HERV	ERVLB4	oneside	chr21	28872592	28876120	-	noncoding	N6AMT1	protein_coding	SENSE	ENSG00000156239	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_21q21.3c	HERV	ERVLE	internal	chr21	30016721	30020270	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF096876.1	ENSG00000259981	69447	GRIK1	ENSG00000171189	76688	None	None
HERVL40_21q22.11	HERV	HERVL40	oneside	chr21	30326714	30328404	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRTAP26-1	ENSG00000197683	6399	KRTAP27-1	ENSG00000206107	8609	None	None
MER41_21q22.11a	HERV	MER41	oneside	chr21	30414009	30414917	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRTAP13-1	ENSG00000198390	17187	KRTAP13-3	ENSG00000240432	10348	None	None
PABLA_21q22.11a	HERV	PABLA	internal	chr21	30414888	30418715	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRTAP13-1	ENSG00000198390	18066	KRTAP13-3	ENSG00000240432	6550	None	None
ERVLE_21q22.11a	HERV	ERVLE	oneside	chr21	31064922	31067593	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBE3AP2	ENSG00000228941	1754	TIAM1	ENSG00000156299	50823	None	None
ERVLE_21q22.11b	HERV	ERVLE	internal	chr21	31752317	31754024	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TPT1P1	ENSG00000234107	86317	AP000255.1	ENSG00000273091	15910	None	None
ERVLE_21q22.11c	HERV	ERVLE	internal	chr21	31793593	31794429	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TPT1P1	ENSG00000234107	45912	AP000255.1	ENSG00000273091	57186	None	None
ERV316A3_21q22.11a	HERV	ERV316A3	internal	chr21	31860927	31865846	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TPT1P1	ENSG00000234107	20069	HUNK	ENSG00000142149	7174	None	None
ERVLE_21q22.11d	HERV	ERVLE	oneside	chr21	32148940	32151906	+	noncoding	LINC00159	lncRNA	ANTISENSE	ENSG00000230323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_21q22.11	HERV	MER4B	prototype	chr21	32153172	32160270	-	noncoding	LINC00159	lncRNA	SENSE	ENSG00000230323	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PABLA_21q22.11b	HERV	PABLA	internal	chr21	32556980	32557323	+	noncoding	C21orf59-TCP10L,TCP10L	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000265590,ENSG00000242220	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_21q22.11b	HERV	MER41	oneside	chr21	32557704	32559480	-	noncoding	C21orf59-TCP10L,TCP10L	protein_coding,protein_coding	SENSE,SENSE	ENSG00000265590,ENSG00000242220	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVEA_21q22.11	HERV	HERVEA	prototype	chr21	32659369	32664759	+	coding	SYNJ1	protein_coding	ANTISENSE	ENSG00000159082	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_21q22.11	HERV	LTR25	internal	chr21	32854061	32858020	-	noncoding	C21orf62-AS1	lncRNA	ANTISENSE	ENSG00000205930	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_21q22.11c	HERV	MER41	internal	chr21	32859688	32860141	-	noncoding	C21orf62-AS1	lncRNA	ANTISENSE	ENSG00000205930	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_21q22.11e	HERV	ERVLE	internal	chr21	32904181	32907202	-	noncoding	C21orf62-AS1	lncRNA	ANTISENSE	ENSG00000205930	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_21q22.11b	HERV	ERV316A3	prototype	chr21	33288905	33293464	-	noncoding	AP000295.1,IL10RB	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000249624,ENSG00000243646	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_21q22.11	HERV	MER61	oneside	chr21	34161331	34166985	-	noncoding	AP000317.2,LINC00310	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000272657,ENSG00000227456	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_21q22.11	HERV	ERVLB4	prototype	chr21	34284739	34292383	+	coding	AP000317.2,AP000317.1	lncRNA,lncRNA	SENSE,SENSE	ENSG00000272657,ENSG00000214955	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_21q22.12	HERV	ERVLB4	oneside	chr21	35156328	35158427	-	noncoding	RUNX1	protein_coding	SENSE	ENSG00000159216	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_21q22.12a	HERV	HERVL	prototype	chr21	35432115	35434686	-	noncoding	RUNX1	protein_coding	SENSE	ENSG00000159216	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_21q22.12a	HERV	ERV316A3	internal	chr21	35714945	35715739	+	noncoding	RUNX1,AF015720.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000159216,ENSG00000230794	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_21q22.12b	HERV	ERV316A3	oneside	chr21	35833358	35839688	+	noncoding	RUNX1	protein_coding	ANTISENSE	ENSG00000159216	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_21q22.12b	HERV	HERVL	internal	chr21	35962624	35966236	-	noncoding	RUNX1	protein_coding	SENSE	ENSG00000159216	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr21:35964203-35964207
MER4B_21q22.12	HERV	MER4B	internal	chr21	36095300	36098036	+	noncoding	AP000688.1	lncRNA	ANTISENSE	ENSG00000230212	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_21q22.12	HERV	HUERSP3B	internal	chr21	36098211	36104237	+	noncoding	AP000688.1	lncRNA	ANTISENSE	ENSG00000230212	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_21q22.12	HERV	HERVIP10FH	oneside	chr21	36104268	36109248	+	noncoding	AP000688.1,AP000688.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000230212,ENSG00000233393	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr21:36104621-36104634,chr21:36104866-36104878
ERV316A3_21q22.13	HERV	ERV316A3	internal	chr21	37304335	37305217	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001437.2	ENSG00000287637	32165	AP001412.1	ENSG00000272948	35838	None	None
HERVH_21q22.13	HERV	HERVH	oneside	chr21	37587926	37592508	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001407.1	ENSG00000286717	1469	DYRK1A	ENSG00000157540	61568	None	None
ERVLE_21q22.13a	HERV	ERVLE	internal	chr21	37601439	37603328	-	noncoding	AP001407.1	lncRNA	ANTISENSE	ENSG00000286717	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_21q22.13	HERV	ERVLB4	oneside	chr21	37770395	37771545	+	noncoding	KCNJ6	protein_coding	ANTISENSE	ENSG00000157542	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_21q22.13b	HERV	ERVLE	internal	chr21	37925617	37928482	-	noncoding	KCNJ6	protein_coding	SENSE	ENSG00000157542	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_21q22.13	HERV	HERV3	prototype	chr21	38224043	38229805	-	noncoding	KCNJ15	protein_coding	ANTISENSE	ENSG00000157551	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr21:38228393-38228999,chr21:38229427-38230208	chr21:38224363-38224367,chr21:38229723-38229734,chr21:38229786-38229822,chr21:38228619-38228622,chr21:38229593-38229630
ERV316A3_21q22.2a	HERV	ERV316A3	oneside	chr21	38338593	38340596	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01423	ENSG00000231231	5172	ERG	ENSG00000157554	39431	None	None
PRIMA41_21q22.2	HERV	PRIMA41	oneside	chr21	39358287	39359961	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN1	ENSG00000205581	8640	RNF6P1	ENSG00000227406	13802	None	None
ERV316A3_21q22.2b	HERV	ERV316A3	oneside	chr21	39572047	39574163	-	noncoding	B3GALT5	protein_coding	ANTISENSE	ENSG00000183778	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_21q22.2c	HERV	ERV316A3	oneside	chr21	39710767	39715002	-	noncoding	AF064860.1	lncRNA	ANTISENSE	ENSG00000225330	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_21q22.2	HERV	ERVLE	internal	chr21	39726327	39727626	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF064860.1	ENSG00000225330	242	AF064860.2	ENSG00000231713	129	None	None
HERVW_21q22.2	HERV	HERVW	prototype	chr21	39739264	39746425	-	noncoding	IGSF5	protein_coding	ANTISENSE	ENSG00000183067	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_21q22.2	HERV	ERVLB4	prototype	chr21	40915182	40922247	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	YRDCP3	ENSG00000230859	50709	AL773573.1	ENSG00000286425	84997	None	None
HERVH_21q22.2	HERV	HERVH	prototype	chr21	40954769	40960696	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	YRDCP3	ENSG00000230859	90296	AL773573.1	ENSG00000286425	46548	None	None
HERVL_21q22.2	HERV	HERVL	oneside	chr21	41189736	41194314	-	coding	BACE2	protein_coding	ANTISENSE	ENSG00000182240	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_21q22.3a	HERV	ERVLB4	oneside	chr21	41510454	41516597	-	noncoding	TMPRSS2	protein_coding	SENSE	ENSG00000184012	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr21:41511944-41512224	chr21:41512090-41512108
ERV316A3_21q22.3a	HERV	ERV316A3	internal	chr21	41653581	41657285	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00111	ENSG00000227702	21896	PCSEAT	ENSG00000286027	70694	None	None
ERV316A3_21q22.3b	HERV	ERV316A3	oneside	chr21	42598743	42600906	-	noncoding	LINC01671	lncRNA	SENSE	ENSG00000225431	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4B_21q22.3	HERV	MER4B	unknown	chr21	42600909	42605973	-	noncoding	LINC01671	lncRNA	SENSE	ENSG00000225431	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_21q22.3a	HERV	ERVLE	internal	chr21	42630635	42632988	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001626.1	ENSG00000235023	15283	LINC01671	ENSG00000225431	15577	None	None
HERVH_21q22.3	HERV	HERVH	prototype	chr21	42800847	42806578	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001628.1	ENSG00000225218	24462	AP001628.2	ENSG00000233754	18618	None	None
MER4_21q22.3a	HERV	MER4	oneside	chr21	42812949	42815759	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001628.1	ENSG00000225218	15281	AP001628.2	ENSG00000233754	30720	None	None
HERVH48_21q22.3	HERV	HERVH48	prototype	chr21	42916742	42925876	-	noncoding	ERVH48-1	lncRNA	SENSE	ENSG00000233056	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr21:42925549-42925560,chr21:42925604-42925613,chr21:42925620-42925637,chr21:42925741-42925750,chr21:42925768-42925791,chr21:42925801-42925831
HARLEQUIN_21q22.3a	HERV	HARLEQUIN	prototype	chr21	42931964	42937545	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ERVH48-1	ENSG00000233056	6318	MIR5692B	ENSG00000264580	13383	chr21:42935875-42936218	chr21:42932216-42932231
HARLEQUIN_21q22.3b	HERV	HARLEQUIN	internal	chr21	42943457	42949462	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR5692B	ENSG00000264580	1466	ERVH48-1	ENSG00000233056	17811	None	None
HERVFRD_21q22.3	HERV	HERVFRD	oneside	chr21	44475207	44477031	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTND5P1	ENSG00000227999	110	AP001065.3	ENSG00000274225	819	None	None
HUERSP2_21q22.3	HERV	HUERSP2	prototype	chr21	44485340	44491111	+	noncoding	LINC02575	lncRNA	SENSE	ENSG00000228709	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr21:44485429-44485475,chr21:44485565-44485572
MER61_21q22.3	HERV	MER61	prototype	chr21	44740294	44746215	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TSPEAR	ENSG00000175894	28722	UBE2G2	ENSG00000184787	22365	None	None
PRIMA4_21q22.3	HERV	PRIMA4	internal	chr21	45260202	45261043	+	noncoding	LINC00334	lncRNA	SENSE	ENSG00000182586	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_21q22.3b	HERV	ERVLE	internal	chr21	45630362	45633131	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PCBP3	ENSG00000183570	10563	AL133493.1	ENSG00000286082	4687	chr21:45632206-45632512,chr21:45632774-45632976	chr21:45632298-45632341
ERV316A3_21q22.3c	HERV	ERV316A3	oneside	chr21	46094126	46096937	-	noncoding	AP001471.1	lncRNA	SENSE	ENSG00000227438	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_21q22.3d	HERV	ERV316A3	internal	chr21	46447214	46447803	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DIP2A	ENSG00000160305	11088	PCNT	ENSG00000160299	1445	None	None
ERV316A3_21q22.3e	HERV	ERV316A3	oneside	chr21	46451755	46458103	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DIP2A	ENSG00000160305	788	PCNT	ENSG00000160299	5986	chr21:46457779-46458505	None
MER41_21q22.3a	HERV	MER41	oneside	chr21	46518871	46522910	-	noncoding	DIP2A	protein_coding	ANTISENSE	ENSG00000160305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_21q22.3b	HERV	MER41	oneside	chr21	46523545	46524689	-	noncoding	DIP2A	protein_coding	ANTISENSE	ENSG00000160305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_21q22.3b	HERV	ERVLB4	internal	chr21	46607219	46610032	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	S100B	ENSG00000160307	2011	PRMT2	ENSG00000160310	25563	None	None
MER4_21q22.3b	HERV	MER4	oneside	chr21	46631793	46635087	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRMT2	ENSG00000160310	508	S100B	ENSG00000160307	26585	None	None
HERVL_22p11.2	HERV	HERVL	prototype	chr22	10680698	10684708	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC145613.1	ENSG00000277248	51463	NA	NA	NA	None	None
PRIMA41_22p11.2a	HERV	PRIMA41	internal	chr22	11318917	11325349	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CT867976.1	ENSG00000288262	149395	AC137488.1	ENSG00000276871	68958	None	None
PRIMA41_22p11.2b	HERV	PRIMA41	internal	chr22	11555751	11561848	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CT867976.1	ENSG00000288262	76108	AC138776.1	ENSG00000286406	265675	None	None
HML1_22p11.2a	HERV	HML1	oneside	chr22	11787878	11789938	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CT867976.1	ENSG00000288262	308235	AC138776.1	ENSG00000286406	37585	None	None
HML3_22p11.2a	HERV	HML3	oneside	chr22	11789940	11793745	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CT867976.1	ENSG00000288262	310297	AC138776.1	ENSG00000286406	33778	None	None
MER4_22p11.2	HERV	MER4	internal	chr22	11928496	11929483	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138776.1	ENSG00000286406	18138	FRG1GP	ENSG00000283023	672983	chr22:11929124-11929225	None
HML1_22p11.2b	HERV	HML1	oneside	chr22	12071330	12073385	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138776.1	ENSG00000286406	160972	FRG1GP	ENSG00000283023	529081	None	None
HML3_22p11.2b	HERV	HML3	oneside	chr22	12073386	12077190	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138776.1	ENSG00000286406	163028	FRG1GP	ENSG00000283023	525276	None	None
HML3_22p11.2c	HERV	HML3	oneside	chr22	12198529	12202322	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FRG1GP	ENSG00000283023	400144	AC138776.1	ENSG00000286406	288171	None	None
HML1_22p11.2c	HERV	HML1	oneside	chr22	12202323	12204378	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FRG1GP	ENSG00000283023	398088	AC138776.1	ENSG00000286406	291965	None	None
ERV316A3_22q11.1a	HERV	ERV316A3	oneside	chr22	15231211	15232429	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FP885535.1	ENSG00000276138	41426	FRG1GP	ENSG00000283023	2604569	None	None
ERV316A3_22q11.1b	HERV	ERV316A3	internal	chr22	15232483	15233690	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FP885535.1	ENSG00000276138	40165	FRG1GP	ENSG00000283023	2605841	None	None
HERVI_22q11.1a	HERV	HERVI	oneside	chr22	15278120	15280559	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FP885535.1	ENSG00000276138	4159	AP000542.3	ENSG00000280341	1998	None	None
HERVIP10F_22q11.1	HERV	HERVIP10F	oneside	chr22	15284876	15290702	+	noncoding	AP000542.3	lncRNA	ANTISENSE	ENSG00000280341	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER101_22q11.1a	HERV	MER101	internal	chr22	15546610	15547503	-	noncoding	AP000534.2	unprocessed_pseudogene	ANTISENSE	ENSG00000237299	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_22q11.1	HERV	MER41	internal	chr22	15647029	15647709	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MED15P7	ENSG00000234381	2699	POTEH	ENSG00000198062	42317	None	None
MER4_22q11.1a	HERV	MER4	prototype	chr22	15657533	15664081	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MED15P7	ENSG00000234381	13203	POTEH	ENSG00000198062	25945	None	None
MER4_22q11.1b	HERV	MER4	internal	chr22	15726092	15727202	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000529.1	ENSG00000241838	3484	PSLNR	ENSG00000225255	19428	None	None
MER4B_22q11.1	HERV	MER4B	oneside	chr22	15926600	15931090	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC145543.1	ENSG00000233866	10800	AC092854.1	ENSG00000278188	210677	None	None
PRIMA4_22q11.1	HERV	PRIMA4	internal	chr22	15935965	15937961	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092854.1	ENSG00000278188	203806	AC145543.1	ENSG00000233866	20165	None	None
ERV316A3_22q11.1c	HERV	ERV316A3	oneside	chr22	16099521	16100763	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092854.1	ENSG00000278188	41004	AC145543.1	ENSG00000233866	183721	None	None
ERV316A3_22q11.1d	HERV	ERV316A3	internal	chr22	16100817	16102026	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092854.1	ENSG00000278188	39741	AC145543.1	ENSG00000233866	185017	None	None
HERVI_22q11.1b	HERV	HERVI	prototype	chr22	16146029	16154515	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092854.1	ENSG00000278188	4157	ABCD1P4	ENSG00000225293	233179	None	None
ERV316A3_22q11.1e	HERV	ERV316A3	internal	chr22	16415042	16416022	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC137499.1	ENSG00000226160	9625	PABPC1P9	ENSG00000229658	7921	None	None
ERV316A3_22q11.1f	HERV	ERV316A3	oneside	chr22	16418913	16420478	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC137499.1	ENSG00000226160	13496	PABPC1P9	ENSG00000229658	3465	None	None
ERVLB4_22q11.1a	HERV	ERVLB4	internal	chr22	16550468	16551586	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000547.2	ENSG00000273362	23231	AP000547.1	ENSG00000233995	20441	None	None
HERVH_22q11.1	HERV	HERVH	prototype	chr22	16611308	16615149	+	noncoding	TPTEP1,AP000547.3	transcribed_unprocessed_pseudogene,lncRNA	SENSE,SENSE	ENSG00000100181,ENSG00000283633	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr22:16611638-16611640,chr22:16613834-16613844,chr22:16613845-16613848,chr22:16613861-16613882
LTR57_22q11.1	HERV	LTR57	internal	chr22	16848825	16850281	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007064.4	ENSG00000283535	2468	AC007064.3	ENSG00000237835	5523	None	None
MER101_22q11.1b	HERV	MER101	internal	chr22	16849069	16853072	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC007064.4	ENSG00000283535	2712	AC007064.3	ENSG00000237835	2732	None	None
HERVL_22q11.1a	HERV	HERVL	prototype	chr22	16899227	16903241	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGKV1OR22-5	ENSG00000230481	978	AC006548.1	ENSG00000225480	1681	None	None
HERVL_22q11.1b	HERV	HERVL	prototype	chr22	16935684	16941229	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006548.3	ENSG00000285045	12666	IGKV1OR22-1	ENSG00000253481	1681	None	None
ERVLB4_22q11.1b	HERV	ERVLB4	internal	chr22	17281404	17283901	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CECR9	ENSG00000231004	45133	CECR3	ENSG00000241832	14671	None	None
ERVL_22q11.21a	HERV	ERVL	internal	chr22	18209951	18210587	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GGTLC5P	ENSG00000276160	129558	FAM230D	ENSG00000187979	4036	None	None
ERVL_22q11.21b	HERV	ERVL	internal	chr22	18414054	18414690	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPP1R26P3	ENSG00000275060	9848	FAM230A	ENSG00000277870	7554	None	None
HML2_22q11.21	HERV	HML2	prototype	chr22	18938674	18947848	+	coding	AC007326.4,AC007326.5	protein_coding,lncRNA	SENSE,SENSE	ENSG00000283809,ENSG00000284294	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr22:18947309-18947654	None
HML3_22q11.21	HERV	HML3	oneside	chr22	18948886	18950244	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007326.2	ENSG00000280418	1690	AC007326.5	ENSG00000284294	1145	None	None
ERV316A3_22q11.21	HERV	ERV316A3	internal	chr22	19155020	19156619	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01311	ENSG00000260924	14776	GSC2	ENSG00000063515	4737	None	None
PRIMAX_22q11.21	HERV	PRIMAX	oneside	chr22	19298641	19306571	+	noncoding	AC000085.1	lncRNA	SENSE	ENSG00000287146	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_22q11.21	HERV	LTR57	internal	chr22	19501517	19502904	-	noncoding	CDC45	protein_coding	ANTISENSE	ENSG00000093009	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_22q11.21a	HERV	ERVLB4	internal	chr22	19787055	19787825	-	noncoding	GNB1L	protein_coding	SENSE	ENSG00000185838	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVK11_22q11.21	HERV	HERVK11	oneside	chr22	19934438	19940687	+	coding	TXNRD2	protein_coding	ANTISENSE	ENSG00000184470	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_22q11.21a	HERV	ERVLE	internal	chr22	20333060	20333697	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007663.3	ENSG00000273139	11857	FAM230G	ENSG00000188280	5108	None	None
MER41_22q11.21	HERV	MER41	internal	chr22	20655240	20656294	-	noncoding	SMPD4P1	transcribed_unprocessed_pseudogene	SENSE	ENSG00000223553	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_22q11.21b	HERV	ERVLB4	internal	chr22	21161004	21161640	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	E2F6P2	ENSG00000224688	18633	FAM230B	ENSG00000215498	6118	None	None
ERVLE_22q11.21b	HERV	ERVLE	internal	chr22	21330981	21331618	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPP1R26P5	ENSG00000232771	9977	FAM230H	ENSG00000206142	5939	None	None
ERV316A3_22q11.22a	HERV	ERV316A3	internal	chr22	22224581	22226044	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC245060.3	ENSG00000234726	2675	TOP3BP1	ENSG00000228050	15	None	None
ERVLB4_22q11.22a	HERV	ERVLB4	oneside	chr22	22262466	22263618	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC245060.6	ENSG00000279278	983	VPREB1	ENSG00000169575	16951	None	None
HERVL_22q11.22a	HERV	HERVL	oneside	chr22	22384866	22389982	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGLV7-43	ENSG00000211652	5036	IGLV1-44	ENSG00000211651	3519	None	None
HERVL_22q11.22b	HERV	HERVL	prototype	chr22	22436423	22438613	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC245291.2	ENSG00000230821	8073	IGLV1-36	ENSG00000211655	3958	None	None
HERVI_22q11.22	HERV	HERVI	prototype	chr22	22452716	22459455	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGLV7-35	ENSG00000253631	2064	AC245291.1	ENSG00000226595	6204	None	None
HUERSP3_22q11.22	HERV	HUERSP3	prototype	chr22	22459938	22465541	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC245291.1	ENSG00000226595	118	IGLV7-35	ENSG00000253631	9286	None	None
ERV316A3_22q11.22b	HERV	ERV316A3	internal	chr22	22655118	22655584	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGLV3-29	ENSG00000253338	5715	GGTLC2	ENSG00000100121	7215	None	None
ERVLB4_22q11.22b	HERV	ERVLB4	internal	chr22	22687579	22689195	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC244250.2	ENSG00000232350	636	IGLV3-25	ENSG00000211659	308	None	None
ERV316A3_22q11.22c	HERV	ERV316A3	internal	chr22	22706347	22707033	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGLV3-21	ENSG00000211662	4656	IGLV3-22	ENSG00000211661	1525	None	None
ERVLB4_22q11.22c	HERV	ERVLB4	internal	chr22	22748219	22749827	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGLV3-15	ENSG00000253786	5727	IGLV3-16	ENSG00000211665	298	None	None
ERVLE_22q11.22a	HERV	ERVLE	internal	chr22	22764411	22765274	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGLV3-12	ENSG00000211667	6550	IGLV3-13	ENSG00000253590	1895	None	None
HERVL_22q11.22c	HERV	HERVL	internal	chr22	22794422	22796348	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGLV2-11	ENSG00000211668	1415	AC245028.3	ENSG00000274381	6728	None	None
ERVLB4_22q11.22d	HERV	ERVLB4	internal	chr22	22812580	22814391	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC245028.1	ENSG00000226477	280	IGLV3-10	ENSG00000211669	299	None	None
ERV316A3_22q11.22d	HERV	ERV316A3	internal	chr22	22851449	22853004	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGLV2-5	ENSG00000253234	3758	IGLV3-6	ENSG00000253448	825	None	None
ERVLE_22q11.22b	HERV	ERVLE	internal	chr22	22950813	22954279	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGLC7	ENSG00000211685	27779	AC245054.2	ENSG00000237472	33984	None	None
HUERSP3B_22q11.22	HERV	HUERSP3B	oneside	chr22	22975079	22981443	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGLC7	ENSG00000211685	52045	AC245054.2	ENSG00000237472	6820	None	None
HUERSP2_22q11.22	HERV	HUERSP2	oneside	chr22	23012824	23014429	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RSPH14	ENSG00000100218	44986	AC245054.1	ENSG00000223679	4468	chr22:23014307-23014666	None
MER4B_22q11.22a	HERV	MER4B	oneside	chr22	23023956	23026083	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC245054.1	ENSG00000223679	15600	RSPH14	ENSG00000100218	33332	None	None
MER4B_22q11.22b	HERV	MER4B	oneside	chr22	23029152	23032525	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC245054.1	ENSG00000223679	20796	RSPH14	ENSG00000100218	26890	None	None
HML2_22q11.23	HERV	HML2	unknown	chr22	23536062	23546900	+	coding	PCAT14	lncRNA	SENSE	ENSG00000280623	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr22:23536870-23536881,chr22:23537010-23537018
ERVLE_22q11.23a	HERV	ERVLE	oneside	chr22	23588695	23590131	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000346.4	ENSG00000278655	16910	AP000345.2	ENSG00000272733	4836	None	None
ERVLE_22q11.23b	HERV	ERVLE	internal	chr22	23871875	23873025	-	noncoding	SLC2A11,AP000350.4,AP000350.7	protein_coding,protein_coding,lncRNA	ANTISENSE,ANTISENSE,SENSE	ENSG00000133460,ENSG00000251357,ENSG00000279467	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_22q11.23	HERV	PRIMA41	internal	chr22	23915159	23919868	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000350.6	ENSG00000273295	8091	AP000350.2	ENSG00000225282	7032	None	None
HERVL40_22q11.23	HERV	HERVL40	oneside	chr22	24531131	24538320	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GUCD1	ENSG00000138867	2103	UPB1	ENSG00000100024	2741	None	None
HUERSP3B_22q12.1	HERV	HUERSP3B	oneside	chr22	25620059	25622022	-	noncoding	GRK3	protein_coding	ANTISENSE	ENSG00000100077	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_22q12.1	HERV	ERVL	oneside	chr22	25637709	25638790	-	noncoding	GRK3	protein_coding	ANTISENSE	ENSG00000100077	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr22:25637896-25638099	None
HERVH_22q12.1	HERV	HERVH	prototype	chr22	27742307	27745128	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121885.1	ENSG00000226169	20630	MN1	ENSG00000169184	3149	None	None
ERVLE_22q12.1	HERV	ERVLE	internal	chr22	28236378	28236985	+	noncoding	TTC28	protein_coding	ANTISENSE	ENSG00000100154	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_22q12.2	HERV	HERVIP10FH	internal	chr22	29413279	29415167	-	noncoding	AP1B1,AC002059.3	protein_coding,transcribed_unprocessed_pseudogene	SENSE,ANTISENSE	ENSG00000100280,ENSG00000285697	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_22q12.2	HERV	LTR57	internal	chr22	30595999	30600038	+	noncoding	PES1,AC005006.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000100029,ENSG00000223831	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr22:30597840-30597846
HML1_22q12.2	HERV	HML1	prototype	chr22	30675434	30679923	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OSBP2	ENSG00000184792	13859	AC003072.2	ENSG00000288153	1300	None	None
ERVLB4_22q12.2	HERV	ERVLB4	internal	chr22	30732332	30733221	-	noncoding	OSBP2	protein_coding	ANTISENSE	ENSG00000184792	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_22q12.3a	HERV	MER41	oneside	chr22	32126246	32127994	+	coding	AP1B1P1	transcribed_unprocessed_pseudogene	SENSE	ENSG00000234479	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_22q12.3	HERV	HERVIP10FH	internal	chr22	32138160	32140576	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP1B1P2	ENSG00000232707	4027	Z83839.2	ENSG00000239674	691	None	None
MER41_22q12.3b	HERV	MER41	oneside	chr22	32348497	32350244	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RFPL3	ENSG00000128276	4641	AL021937.3	ENSG00000234626	5392	None	None
HERVH_22q12.3a	HERV	HERVH	prototype	chr22	32502754	32508503	+	noncoding	SYN3	protein_coding	ANTISENSE	ENSG00000185666	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
HERVL_22q12.3a	HERV	HERVL	oneside	chr22	32757105	32758743	+	noncoding	SYN3	protein_coding	ANTISENSE	ENSG00000185666	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_22q12.3	HERV	MER101	internal	chr22	33373468	33375729	+	noncoding	LARGE1	protein_coding	ANTISENSE	ENSG00000133424	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_22q12.3a	HERV	ERVLE	internal	chr22	33940248	33941123	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LARGE1	ENSG00000133424	17407	LINC01643	ENSG00000236052	76299	None	None
HERVL18_22q12.3a	HERV	HERVL18	internal	chr22	34324531	34325577	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01643	ENSG00000236052	105735	AL021877.1	ENSG00000235485	263508	None	None
HERVL18_22q12.3b	HERV	HERVL18	oneside	chr22	34332469	34335191	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL021877.1	ENSG00000235485	253894	LINC01643	ENSG00000236052	113673	None	None
PRIMA41_22q12.3	HERV	PRIMA41	internal	chr22	34505411	34510720	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01643	ENSG00000236052	286615	AL021877.1	ENSG00000235485	78365	None	None
HERVL_22q12.3b	HERV	HERVL	opposite*	chr22	34518823	34521872	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01643	ENSG00000236052	300027	AL021877.1	ENSG00000235485	67213	None	None
ERV316A3_22q12.3a	HERV	ERV316A3	internal	chr22	34666602	34667307	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z82196.1	ENSG00000234891	35819	AL021877.2	ENSG00000280356	14740	None	None
ERVLE_22q12.3b	HERV	ERVLE	internal	chr22	34668457	34670215	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z82196.1	ENSG00000234891	32911	AL021877.2	ENSG00000280356	16595	None	None
ERV316A3_22q12.3b	HERV	ERV316A3	oneside	chr22	34673100	34675939	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL021877.2	ENSG00000280356	21238	Z82196.1	ENSG00000234891	27187	chr22:34675616-34675634	None
ERVLE_22q12.3c	HERV	ERVLE	oneside	chr22	34710854	34712244	+	noncoding	Z82196.2	lncRNA	ANTISENSE	ENSG00000237316	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVL_22q12.3a	HERV	ERVL	internal	chr22	34733522	34735322	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL024495.1	ENSG00000286592	21354	Z82196.2	ENSG00000237316	8603	None	None
ERVLE_22q12.3d	HERV	ERVLE	internal	chr22	34735427	34739304	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL024495.1	ENSG00000286592	17372	Z82196.2	ENSG00000237316	10508	None	None
ERV316A3_22q12.3c	HERV	ERV316A3	internal	chr22	34828975	34830231	-	noncoding	AL024495.1	lncRNA	SENSE	ENSG00000286592	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_22q12.3b	HERV	HERVH	prototype	chr22	34834608	34840024	+	noncoding	AL024495.1	lncRNA	ANTISENSE	ENSG00000286592	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_22q12.3	HERV	HERVFRD	internal	chr22	35368801	35370634	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TOM1	ENSG00000100284	20809	Z82244.2	ENSG00000282602	1540	None	None
MER4_22q12.3	HERV	MER4	prototype	chr22	35662326	35668403	+	noncoding	APOL6	protein_coding	SENSE	ENSG00000221963	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr22:35663531-35663539
MER41_22q12.3c	HERV	MER41	prototype	chr22	35668700	35673866	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	APOL6	ENSG00000221963	296	AL049748.1	ENSG00000228587	12074	None	None
ERVL_22q12.3b	HERV	ERVL	internal	chr22	36135027	36136798	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z95114.2	ENSG00000279714	41675	Z95114.3	ENSG00000279805	632	None	None
LTR57_22q12.3	HERV	LTR57	internal	chr22	36179880	36181488	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	APOL4	ENSG00000100336	7636	MTND1P10	ENSG00000229088	495	None	None
ERVLB4_22q12.3	HERV	ERVLB4	internal	chr22	36183602	36184275	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTND1P10	ENSG00000229088	4217	APOL4	ENSG00000100336	4849	None	None
MER41_22q12.3d	HERV	MER41	internal	chr22	36216030	36217510	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	APOL4	ENSG00000100336	11190	APOL2	ENSG00000128335	8699	None	None
ERVLE_22q12.3e	HERV	ERVLE	internal	chr22	36971692	36973150	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TEX33	ENSG00000185264	17970	Z82180.1	ENSG00000215403	3520	None	None
MER41_22q12.3e	HERV	MER41	prototype	chr22	37188838	37196108	-	noncoding	C1QTNF6	protein_coding	SENSE	ENSG00000133466	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr22:37188988-37189283	chr22:37195619-37195644
ERV316A3_22q13.1	HERV	ERV316A3	oneside	chr22	37287909	37290999	-	noncoding	CYTH4	protein_coding	ANTISENSE	ENSG00000100055	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_22q13.1	HERV	MER101	internal	chr22	38903544	38905275	+	noncoding	AL022318.5	lncRNA	SENSE	ENSG00000288106	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_22q13.1a	HERV	ERVLE	internal	chr22	38914868	38916192	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL022318.1	ENSG00000235209	5035	AL022318.5	ENSG00000288106	11074	None	None
HERVH_22q13.1a	HERV	HERVH	prototype	chr22	39056262	39062970	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL022318.2	ENSG00000259421	7444	APOBEC3F	ENSG00000128394	290	None	None
HERVH_22q13.1b	HERV	HERVH	prototype	chr22	39066094	39068308	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL022318.2	ENSG00000259421	2106	APOBEC3F	ENSG00000128394	10122	chr22:39066073-39066530,chr22:39066950-39067369	chr22:39066323-39066336
ERVLE_22q13.1b	HERV	ERVLE	internal	chr22	39809636	39812775	+	noncoding	ENTHD1	protein_coding	ANTISENSE	ENSG00000176177	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_22q13.2a	HERV	ERVLE	internal	chr22	40658587	40659544	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP37	ENSG00000231907	13940	MRTFA	ENSG00000196588	21868	None	None
ERVLE_22q13.2b	HERV	ERVLE	internal	chr22	40660838	40661423	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRTFA	ENSG00000196588	24119	GAPDHP37	ENSG00000231907	12061	None	None
ERVLB4_22q13.2	HERV	ERVLB4	oneside	chr22	40661900	40664220	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRTFA	ENSG00000196588	25181	GAPDHP37	ENSG00000231907	9264	None	None
ERVLE_22q13.2c	HERV	ERVLE	internal	chr22	41026681	41029740	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBX1	ENSG00000100387	53372	AL080243.3	ENSG00000222698	15757	None	None
ERVLE_22q13.2d	HERV	ERVLE	internal	chr22	41029765	41032076	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL080243.3	ENSG00000222698	13421	RBX1	ENSG00000100387	56456	None	None
ERVLE_22q13.2e	HERV	ERVLE	internal	chr22	41708236	41711531	-	noncoding	MEI1,HMGN2P10	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000167077,ENSG00000231261	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_22q13.2	HERV	HERVL40	prototype	chr22	41814715	41818857	-	noncoding	CCDC134	protein_coding	ANTISENSE	ENSG00000100147	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_22q13.2	HERV	HERVIP10F	oneside	chr22	42104469	42112914	-	coding	NDUFA6-DT,OLA1P1	lncRNA,processed_pseudogene	ANTISENSE,SENSE	ENSG00000237037,ENSG00000213790	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr22:42108971-42108977
HERVI_22q13.2	HERV	HERVI	oneside	chr22	42112920	42115918	-	noncoding	NDUFA6-DT	lncRNA	ANTISENSE	ENSG00000237037	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_22q13.2f	HERV	ERVLE	internal	chr22	42680611	42682407	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYB5R3	ENSG00000100243	31219	A4GALT	ENSG00000128274	9714	chr22:42680671-42681076	chr22:42680879-42680899
ERVL_22q13.2	HERV	ERVL	internal	chr22	43512210	43514583	-	noncoding	BX546033.1	lncRNA	SENSE	ENSG00000286801	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_22q13.2g	HERV	ERVLE	internal	chr22	43698073	43698692	+	noncoding	EFCAB6	protein_coding	ANTISENSE	ENSG00000186976	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_22q13.31a	HERV	ERVLE	internal	chr22	44179209	44179744	-	noncoding	PARVG	protein_coding	ANTISENSE	ENSG00000138964	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_22q13.31b	HERV	ERVLE	internal	chr22	44554515	44555336	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT18P23	ENSG00000215333	11629	RTL6	ENSG00000188636	56282	None	None
MER34B_22q13.31	HERV	MER34B	internal	chr22	44852585	44854182	-	noncoding	PRR5-ARHGAP8,ARHGAP8	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000248405,ENSG00000241484	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_22q13.31a	HERV	ERVLB4	internal	chr22	45127991	45128609	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PHF21B	ENSG00000056487	117986	NUP50-DT	ENSG00000226328	4411	None	None
MER4_22q13.31a	HERV	MER4	prototype	chr22	45373012	45375490	+	noncoding	SMC1B	protein_coding	ANTISENSE	ENSG00000077935	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_22q13.31	HERV	HERVL	prototype	chr22	45555207	45562120	-	noncoding	FBLN1	protein_coding	ANTISENSE	ENSG00000077942	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_22q13.31a	HERV	ERV316A3	oneside	chr22	45650661	45652489	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z95331.1	ENSG00000280383	4530	RNU6-1161P	ENSG00000251985	26029	None	None
ERVLB4_22q13.31b	HERV	ERVLB4	oneside	chr22	45855129	45859216	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX324167.2	ENSG00000279954	16716	ATXN10	ENSG00000130638	9822	None	None
ERV316A3_22q13.31b	HERV	ERV316A3	oneside	chr22	46020980	46022195	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX537318.1	ENSG00000273145	5482	LINC00899	ENSG00000231711	17712	None	None
HERV3_22q13.31	HERV	HERV3	internal	chr22	46180796	46181925	+	noncoding	PPARA	protein_coding	SENSE	ENSG00000186951	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_22q13.31b	HERV	MER4	prototype	chr22	47578322	47585857	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01644	ENSG00000218357	91211	LINC00898	ENSG00000205634	26374	None	None
ERVLE_22q13.31c	HERV	ERVLE	internal	chr22	47734263	47735569	-	noncoding	AL117329.1	lncRNA	ANTISENSE	ENSG00000224271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_22q13.31d	HERV	ERVLE	internal	chr22	47859718	47861696	-	noncoding	AL117329.1	lncRNA	ANTISENSE	ENSG00000224271	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_22q13.31e	HERV	ERVLE	internal	chr22	47948485	47950432	-	noncoding	AL117329.1	lncRNA	ANTISENSE	ENSG00000224271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_22q13.32	HERV	ERVLE	internal	chr22	48184140	48186208	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL008720.1	ENSG00000285707	68695	BX284656.1	ENSG00000229275	40911	None	None
ERVLB4_22q13.32b	HERV	ERVLB4	insert*	chr22	48456289	48461048	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z82249.1	ENSG00000233179	5072	Z84468.2	ENSG00000287225	13087	None	None
LTR57_22q13.32	HERV	LTR57	internal	chr22	48968230	48973023	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL078622.1	ENSG00000286381	74461	LINC01310	ENSG00000205632	69844	None	None
ERVLB4_22q13.32a	HERV	ERVLB4	oneside	chr22	49097803	49099489	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL078622.1	ENSG00000286381	45254	Z82202.2	ENSG00000285623	66932	None	None
ERV316A3_22q13.33a	HERV	ERV316A3	internal	chr22	49930842	49933439	-	noncoding	BX539320.1	lncRNA	SENSE	ENSG00000278869	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr22:49930962-49931284	None
ERVLE_22q13.33	HERV	ERVLE	internal	chr22	50583743	50587782	+	noncoding	CHKB,CHKB-DT	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000100288,ENSG00000205559	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_22q13.33a	HERV	MER4	oneside	chr22	50645106	50646851	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARSA	ENSG00000100299	16933	AC000050.1	ENSG00000212569	22953	None	None
MER4_22q13.33b	HERV	MER4	internal	chr22	50647143	50650658	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARSA	ENSG00000100299	18970	AC000050.1	ENSG00000212569	19146	None	None
MER4_22q13.33c	HERV	MER4	oneside	chr22	50650878	50653154	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARSA	ENSG00000100299	22705	AC000050.1	ENSG00000212569	16650	None	None
ERV316A3_22q13.33b	HERV	ERV316A3	oneside	chr22	50765992	50767060	+	noncoding	RPL23AP82	transcribed_unprocessed_pseudogene	SENSE	ENSG00000184319	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_Xp22.33	HERV	LTR19	prototype	chrX	1443947	1447420	+	noncoding	ASMTL	protein_coding	ANTISENSE	ENSG00000169093	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_Xp22.33	HERV	HUERSP2	internal	chrX	2972209	2973779	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARSH	ENSG00000205667	32834	ARSL	ENSG00000157399	3734	None	None
MER4B_Xp22.33	HERV	MER4B	unknown	chrX	3040211	3051599	+	noncoding	ARSF	protein_coding	SENSE	ENSG00000062096	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xp22.33	HERV	HERVH	prototype	chrX	3553142	3560161	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-114P	ENSG00000207435	12696	SNORA48B	ENSG00000212214	20891	None	None
HERVEA_Xp22.33	HERV	HERVEA	prototype	chrX	3965875	3976187	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	BX890604.1	ENSG00000225722	12314	AC074035.1	ENSG00000236513	651013	None	None
ERV316A3_Xp22.33	HERV	ERV316A3	internal	chrX	3998825	4000550	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX890604.1	ENSG00000225722	45264	AC074035.1	ENSG00000236513	626650	None	None
ERVLE_Xp22.33	HERV	ERVLE	internal	chrX	4332342	4335903	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX890604.1	ENSG00000225722	378781	AC074035.1	ENSG00000236513	291297	None	None
HERVH_Xp22.32a	HERV	HERVH	prototype	chrX	4540474	4546320	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074035.1	ENSG00000236513	80880	BX890604.1	ENSG00000225722	586913	None	chrX:4541259-4541269,chrX:4544996-4545021,chrX:4545766-4545773
HERVL66_Xp22.32	HERV	HERVL66	prototype	chrX	4771021	4775596	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTND6P12	ENSG00000235039	393322	AC074035.1	ENSG00000236513	137449	None	chrX:4775293-4775308
ERVLE_Xp22.32a	HERV	ERVLE	internal	chrX	4850571	4851596	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074035.1	ENSG00000236513	216999	MTND6P12	ENSG00000235039	317322	None	None
HERVH_Xp22.32b	HERV	HERVH	prototype	chrX	4891614	4897331	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074035.1	ENSG00000236513	258042	MTND6P12	ENSG00000235039	271587	None	None
ERVLE_Xp22.32b	HERV	ERVLE	internal	chrX	5495101	5496390	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC110995.1	ENSG00000236120	157028	AC095353.1	ENSG00000201660	84850	None	None
HERVH_Xp22.31	HERV	HERVH	prototype	chrX	6272220	6277943	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4770	ENSG00000265284	105963	NLGN4X	ENSG00000146938	43353	None	None
MER4_Xp22.31	HERV	MER4	internal	chrX	7235871	7237312	-	noncoding	STS	protein_coding	ANTISENSE	ENSG00000101846	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_Xp22.31	HERV	ERVL	internal	chrX	7617069	7618775	-	noncoding	STS	protein_coding	ANTISENSE	ENSG00000101846	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_Xp22.31	HERV	HERVW	prototype	chrX	7699169	7704068	-	noncoding	STS	protein_coding	ANTISENSE	ENSG00000101846	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xp22.31a	HERV	HERVL	prototype	chrX	7974863	7979983	+	coding	AC079142.1	lncRNA	SENSE	ENSG00000285679	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_Xp22.31	HERV	HERVL40	internal	chrX	8750479	8751503	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DRAXINP1	ENSG00000225574	32011	ANOS1	ENSG00000011201	18342	None	None
HUERSP3B_Xp22.31	HERV	HUERSP3B	oneside	chrX	8768037	8772821	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DRAXINP1	ENSG00000225574	10693	ANOS1	ENSG00000011201	35900	None	None
HERVL_Xp22.31b	HERV	HERVL	internal	chrX	9090837	9092255	-	noncoding	FAM9B	protein_coding	SENSE	ENSG00000177138	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_Xp22.31	HERV	MER41	internal	chrX	9225281	9226042	-	noncoding	FAM9B	protein_coding	SENSE	ENSG00000177138	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_Xp22.2	HERV	HUERSP1	oneside	chrX	9665455	9670571	+	coding	TBL1X	protein_coding	SENSE	ENSG00000101849	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xp22.2	HERV	HERVL	prototype	chrX	9809093	9815987	-	noncoding	SHROOM2	protein_coding	ANTISENSE	ENSG00000146950	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_Xp22.2	HERV	HARLEQUIN	prototype	chrX	10584793	10590340	-	noncoding	MID1	protein_coding	SENSE	ENSG00000101871	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chrX:10589957-10589962
MER4_Xp22.2a	HERV	MER4	oneside	chrX	12935112	12937470	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMSB4X	ENSG00000205542	37640	TLR8	ENSG00000101916	11943	None	None
LTR57_Xp22.2	HERV	LTR57	internal	chrX	12937471	12938029	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMSB4X	ENSG00000205542	37081	TLR8	ENSG00000101916	14302	None	None
MER4_Xp22.2b	HERV	MER4	internal	chrX	12938030	12939864	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMSB4X	ENSG00000205542	35246	TLR8	ENSG00000101916	14861	None	None
HERVH_Xp22.2a	HERV	HERVH	prototype	chrX	12939865	12945537	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TLR8	ENSG00000101916	16696	TMSB4X	ENSG00000205542	29573	None	None
ERVLE_Xp22.2a	HERV	ERVLE	internal	chrX	14312512	14313807	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GLRA2	ENSG00000101958	215491	AC002524.1	ENSG00000233247	67584	None	None
MER34B_Xp22.2	HERV	MER34B	prototype	chrX	15964841	15972992	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRPR	ENSG00000126010	150573	SETP15	ENSG00000226536	46210	None	None
HERVH_Xp22.2b	HERV	HERVH	prototype	chrX	16044720	16050414	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRPR	ENSG00000126010	73151	SETP15	ENSG00000226536	126089	None	None
HERVH_Xp22.2c	HERV	HERVH	prototype	chrX	16179202	16184434	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL6P30	ENSG00000215313	13994	MAGEB17	ENSG00000182798	7738	None	chrX:16184055-16184062
HERVH_Xp22.2d	HERV	HERVH	prototype	chrX	16216873	16222257	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073909.1	ENSG00000235071	252085	RPL6P30	ENSG00000215313	17584	None	None
ERVLE_Xp22.2b	HERV	ERVLE	internal	chrX	16434262	16436398	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL6P30	ENSG00000215313	234973	AC073909.1	ENSG00000235071	37944	None	None
MER4_Xp22.2c	HERV	MER4	oneside	chrX	16576717	16577940	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL658P	ENSG00000239333	37278	CTPS2	ENSG00000047230	10059	None	chrX:16577108-16577112,chrX:16577206-16577218,chrX:16577193-16577204
MER4_Xp22.2d	HERV	MER4	oneside	chrX	16577951	16583715	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL658P	ENSG00000239333	38512	CTPS2	ENSG00000047230	4284	None	None
MER41_Xp22.2	HERV	MER41	prototype	chrX	16671289	16677993	+	noncoding	CTPS2	protein_coding	ANTISENSE	ENSG00000047230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_Xp22.2	HERV	PABLA	prototype	chrX	16726001	16732664	-	noncoding	SYAP1	protein_coding	ANTISENSE	ENSG00000169895	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xp22.13	HERV	ERV316A3	internal	chrX	18011153	18012534	+	noncoding	LINC01456	lncRNA	ANTISENSE	ENSG00000225882	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_Xp22.13	HERV	MER101	internal	chrX	18834403	18835056	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPEF1	ENSG00000086717	6482	AL096700.1	ENSG00000196564	3653	None	None
ERVLE_Xp22.13	HERV	ERVLE	oneside	chrX	18842936	18845157	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL096700.1	ENSG00000196564	3484	HAUS1P2	ENSG00000224224	20614	None	None
HERVL_Xp22.12a	HERV	HERVL	oneside	chrX	20037207	20040353	+	noncoding	MAP7D2	protein_coding	ANTISENSE	ENSG00000184368	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xp22.12	HERV	ERV316A3	oneside	chrX	20575086	20578575	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL807740.1	ENSG00000283400	82737	AL807742.1	ENSG00000283380	191143	None	None
ERVLE_Xp22.12a	HERV	ERVLE	internal	chrX	20620130	20621550	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL807740.1	ENSG00000283400	127781	AL807742.1	ENSG00000283380	148168	None	None
HERVL_Xp22.12b	HERV	HERVL	oneside	chrX	20868232	20872282	+	noncoding	AL807742.1	lncRNA	ANTISENSE	ENSG00000283380	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Xp22.12	HERV	MER4	prototype	chrX	20995194	21001020	+	noncoding	AL807742.1	lncRNA	ANTISENSE	ENSG00000283380	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_Xp22.12b	HERV	ERVLE	internal	chrX	21312934	21316062	+	noncoding	AL807742.1	lncRNA	ANTISENSE	ENSG00000283380	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_Xp22.12c	HERV	ERVLE	internal	chrX	21696964	21698163	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SMPX	ENSG00000091482	7815	KLHL34	ENSG00000185915	38634	None	None
MER4_Xp22.11a	HERV	MER4	oneside	chrX	23234251	23238516	+	coding	AC004470.2	lncRNA	ANTISENSE	ENSG00000288546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Xp22.11b	HERV	MER4	oneside	chrX	23244576	23247865	+	noncoding	AC004470.2	lncRNA	ANTISENSE	ENSG00000288546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xp22.11	HERV	ERV316A3	oneside	chrX	23748936	23751401	-	noncoding	ACOT9	protein_coding	SENSE	ENSG00000123130	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_Xp21.3	HERV	HML5	oneside	chrX	25893165	25900469	+	noncoding	AC121342.1	lncRNA	SENSE	ENSG00000233403	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_Xp21.3a	HERV	MER41	prototype	chrX	26372747	26375653	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079178.2	ENSG00000231388	121283	AC073614.1	ENSG00000228464	26505	None	None
MER41_Xp21.3b	HERV	MER41	oneside	chrX	26468364	26471614	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079178.2	ENSG00000231388	25322	AC073614.1	ENSG00000228464	122122	None	None
ERV316A3_Xp21.3a	HERV	ERV316A3	internal	chrX	26587494	26588997	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VENTXP1	ENSG00000259849	26442	AC005345.1	ENSG00000236160	68294	None	None
HUERSP3B_Xp21.3a	HERV	HUERSP3B	prototype	chrX	26648755	26654821	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005345.1	ENSG00000236160	2470	VENTXP1	ENSG00000259849	87703	None	None
HUERSP3B_Xp21.3b	HERV	HUERSP3B	internal	chrX	26778880	26783112	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-142P	ENSG00000252491	7030	HMGA1P1	ENSG00000236683	29790	None	None
HUERSP3_Xp21.3	HERV	HUERSP3	oneside	chrX	26783322	26785067	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-142P	ENSG00000252491	5075	HMGA1P1	ENSG00000236683	34232	None	None
PABLA_Xp21.3a	HERV	PABLA	oneside	chrX	26880055	26883822	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC112493.1	ENSG00000242021	159085	RNU1-142P	ENSG00000252491	89769	None	None
PABLA_Xp21.3b	HERV	PABLA	oneside	chrX	26884027	26886324	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC112493.1	ENSG00000242021	156583	RNU1-142P	ENSG00000252491	93741	None	None
ERVLE_Xp21.3a	HERV	ERVLE	internal	chrX	27072152	27076503	-	noncoding	AC112493.1	lncRNA	SENSE	ENSG00000242021	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xp21.3a	HERV	ERVLB4	internal	chrX	27145242	27146517	+	noncoding	AC112493.1	lncRNA	ANTISENSE	ENSG00000242021	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xp21.3a	HERV	HERVH	prototype	chrX	27286223	27294978	-	noncoding	AC107419.1	lncRNA	SENSE	ENSG00000228933	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_Xp21.3	HERV	MER61	prototype	chrX	27440273	27444796	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPP4R3C	ENSG00000224960	15411	PTP4A1P5	ENSG00000235642	12042	None	None
ERV316A3_Xp21.3b	HERV	ERV316A3	internal	chrX	27554415	27555377	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006210.2	ENSG00000238247	34656	DCAF8L2	ENSG00000189186	35005	None	None
ERV316A3_Xp21.3c	HERV	ERV316A3	oneside	chrX	27557598	27561238	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DCAF8L2	ENSG00000189186	29144	AC006210.2	ENSG00000238247	37839	None	None
ERV316A3_Xp21.3d	HERV	ERV316A3	internal	chrX	27610593	27611356	+	noncoding	DCAF8L2	protein_coding	SENSE	ENSG00000189186	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xp21.3b	HERV	ERVLB4	internal	chrX	27675698	27676834	+	noncoding	DCAF8L2	protein_coding	SENSE	ENSG00000189186	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_Xp21.3b	HERV	ERVLE	internal	chrX	27679288	27679962	-	noncoding	DCAF8L2	protein_coding	ANTISENSE	ENSG00000189186	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xp21.3b	HERV	HERVH	prototype	chrX	28502595	28507894	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC112495.1	ENSG00000223742	63638	MIR6134	ENSG00000277569	6932	None	None
ERV316A3_Xp21.3e	HERV	ERV316A3	internal	chrX	28555315	28557109	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC112495.1	ENSG00000223742	14423	MIR6134	ENSG00000277569	59652	None	None
ERV316A3_Xp21.3f	HERV	ERV316A3	internal	chrX	28559951	28560703	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC112495.1	ENSG00000223742	10829	MIR6134	ENSG00000277569	64288	None	None
HERVH_Xp21.3c	HERV	HERVH	prototype	chrX	28892120	28898168	-	noncoding	IL1RAPL1	protein_coding	ANTISENSE	ENSG00000169306	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xp21.2a	HERV	HERVH	prototype	chrX	29975546	29981247	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IL1RAPL1	ENSG00000169306	18828	PIGFP3	ENSG00000227592	35913	None	None
HERVH_Xp21.2b	HERV	HERVH	prototype	chrX	30103613	30109253	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PIGFP3	ENSG00000227592	85732	AC005185.1	ENSG00000270794	100170	None	None
HERVH_Xp21.2c	HERV	HERVH	prototype	chrX	30448932	30454861	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CXorf21	ENSG00000120280	103948	NR0B1	ENSG00000169297	139542	None	None
ERV316A3_Xp21.2	HERV	ERV316A3	oneside	chrX	30910129	30913573	+	noncoding	TAB3	protein_coding	ANTISENSE	ENSG00000157625	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_Xp21.2a	HERV	ERVLE	internal	chrX	30957858	30959238	-	noncoding	TAB3	protein_coding	SENSE	ENSG00000157625	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_Xp21.2b	HERV	ERVLE	internal	chrX	30961544	30963453	-	noncoding	TAB3	protein_coding	SENSE	ENSG00000157625	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xp21.2d	HERV	HERVH	prototype	chrX	31377722	31383370	+	noncoding	DMD	protein_coding	ANTISENSE	ENSG00000198947	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_Xp21.1a	HERV	MER41	oneside	chrX	32288683	32289963	+	noncoding	DMD	protein_coding	ANTISENSE	ENSG00000198947	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_Xp21.1a	HERV	HUERSP1	oneside	chrX	33076745	33080349	-	noncoding	DMD	protein_coding	SENSE	ENSG00000198947	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_Xp21.1b	HERV	HUERSP1	oneside	chrX	33080387	33084921	-	noncoding	DMD	protein_coding	SENSE	ENSG00000198947	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chrX:33083177-33083207,chrX:33083210-33083211,chrX:33083450-33083454,chrX:33083463-33083472,chrX:33083530-33083536,chrX:33083549-33083550
MER101_Xp21.1	HERV	MER101	internal	chrX	33907492	33909753	+	noncoding	AL591501.1	lncRNA	SENSE	ENSG00000233928	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLB_Xp21.1a	HERV	PABLB	prototype	chrX	33909958	33914944	+	noncoding	AL591501.1	lncRNA	SENSE	ENSG00000233928	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_Xp21.1	HERV	HERVFRD	prototype	chrX	33918528	33924823	-	noncoding	AL591501.1	lncRNA	ANTISENSE	ENSG00000233928	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_Xp21.1b	HERV	MER41	internal	chrX	33920155	33922112	-	noncoding	AL591501.1	lncRNA	ANTISENSE	ENSG00000233928	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xp21.1a	HERV	ERVLB4	internal	chrX	34013575	34015193	-	noncoding	AL591501.1	lncRNA	ANTISENSE	ENSG00000233928	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xp21.1a	HERV	ERV316A3	internal	chrX	34047979	34048914	+	noncoding	AL591501.1	lncRNA	SENSE	ENSG00000233928	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xp21.1b	HERV	ERV316A3	oneside	chrX	34050422	34052124	+	noncoding	AL591501.1	lncRNA	SENSE	ENSG00000233928	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_Xp21.1a	HERV	MER61	prototype	chrX	34053673	34058606	+	noncoding	AL591501.1	lncRNA	SENSE	ENSG00000233928	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xp21.1b	HERV	ERVLB4	internal	chrX	34073764	34077741	+	noncoding	AL591501.1	lncRNA	SENSE	ENSG00000233928	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_Xp21.1a	HERV	ERVLE	internal	chrX	34236588	34240023	+	noncoding	AL591501.1,AL592043.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000233928,ENSG00000233571	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_Xp21.1b	HERV	ERVLE	internal	chrX	34306604	34309720	+	noncoding	AL591501.1,AL592043.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000233928,ENSG00000233571	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_Xp21.1c	HERV	MER41	internal	chrX	34549437	34550682	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL592504.1	ENSG00000271136	32079	TMEM47	ENSG00000147027	76393	None	None
MER61_Xp21.1b	HERV	MER61	oneside	chrX	34559247	34561452	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM47	ENSG00000147027	65623	AL592504.1	ENSG00000271136	41889	None	None
HERVK11_Xp21.1	HERV	HERVK11	prototype	chrX	34796024	34803445	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL596245.1	ENSG00000273704	27336	FAM47B	ENSG00000189132	139351	None	None
PRIMA41_Xp21.1	HERV	PRIMA41	oneside	chrX	34983864	34991714	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL596268.1	ENSG00000229347	67213	FAM47B	ENSG00000189132	38949	None	None
ERV316A3_Xp21.1c	HERV	ERV316A3	internal	chrX	35142752	35144483	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1087P	ENSG00000252411	449690	AL596268.1	ENSG00000229347	82778	None	None
MER61_Xp21.1c	HERV	MER61	oneside	chrX	35272597	35276627	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1087P	ENSG00000252411	317546	AL596268.1	ENSG00000229347	212623	None	None
ERVLE_Xp21.1c	HERV	ERVLE	internal	chrX	35392346	35394210	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL596268.1	ENSG00000229347	332372	RNU6-1087P	ENSG00000252411	199963	None	None
MER4B_Xp21.1a	HERV	MER4B	prototype	chrX	35433071	35442339	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1087P	ENSG00000252411	151834	AL596268.1	ENSG00000229347	373097	None	None
MER4_Xp21.1a	HERV	MER4	oneside	chrX	35440934	35442339	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1087P	ENSG00000252411	151834	AL596268.1	ENSG00000229347	380960	None	None
HERVH_Xp21.1a	HERV	HERVH	oneside	chrX	35609422	35612530	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1087P	ENSG00000252411	15149	SIAH1P1	ENSG00000230227	13612	None	None
ERVLB4_Xp21.1c	HERV	ERVLB4	oneside	chrX	35749571	35751602	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161722.2	ENSG00000233880	9897	AL161722.3	ENSG00000271088	4989	None	None
MER4B_Xp21.1b	HERV	MER4B	oneside	chrX	35771827	35779150	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAGEB16	ENSG00000189023	19192	AL161722.2	ENSG00000233880	9348	None	None
MER4_Xp21.1b	HERV	MER4	oneside	chrX	35779172	35780871	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAGEB16	ENSG00000189023	17471	AL161722.2	ENSG00000233880	16693	None	None
ERVLE_Xp21.1d	HERV	ERVLE	internal	chrX	35891788	35892375	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590065.1	ENSG00000271519	22157	CFAP47	ENSG00000165164	27359	None	None
ERV316A3_Xp21.1d	HERV	ERV316A3	internal	chrX	36566942	36570779	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL592156.1	ENSG00000286475	107899	AL606516.1	ENSG00000226484	126650	None	None
ERV316A3_Xp21.1e	HERV	ERV316A3	internal	chrX	36638915	36640294	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL606516.1	ENSG00000226484	198623	AL592156.1	ENSG00000286475	38384	None	None
MER61_Xp21.1d	HERV	MER61	internal	chrX	36997867	36999461	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX842568.3	ENSG00000231069	11774	FAM47C	ENSG00000198173	8936	None	None
MER61_Xp21.1e	HERV	MER61	oneside	chrX	36999625	37000581	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX842568.3	ENSG00000231069	13532	FAM47C	ENSG00000198173	7816	None	None
HERVH_Xp21.1b	HERV	HERVH	oneside	chrX	37458430	37461248	-	noncoding	AF241726.2	protein_coding	ANTISENSE	ENSG00000250349	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xp21.1d	HERV	ERVLB4	internal	chrX	37461988	37465035	-	noncoding	AF241726.2	protein_coding	ANTISENSE	ENSG00000250349	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chrX:37462820-37462830
PABLB_Xp21.1b	HERV	PABLB	internal	chrX	37466596	37469950	+	noncoding	AF241726.2	protein_coding	SENSE	ENSG00000250349	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLB_Xp21.1c	HERV	PABLB	internal	chrX	37470649	37472557	+	noncoding	AF241726.2	protein_coding	SENSE	ENSG00000250349	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xp21.1e	HERV	ERVLB4	internal	chrX	37475533	37478048	-	noncoding	AF241726.2	protein_coding	ANTISENSE	ENSG00000250349	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_Xp21.1	HERV	HERVIP10F	oneside	chrX	37478342	37480060	+	noncoding	AF241726.2	protein_coding	SENSE	ENSG00000250349	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_Xp21.1	HERV	HERVIP10FH	oneside	chrX	37480049	37484837	+	noncoding	AF241726.2	protein_coding	SENSE	ENSG00000250349	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chrX:37484705-37484710
MER61_Xp21.1f	HERV	MER61	oneside	chrX	37553451	37555960	-	noncoding	AF241726.2	protein_coding	ANTISENSE	ENSG00000250349	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_Xp11.4a	HERV	MER41	oneside	chrX	37883000	37888014	-	noncoding	AF241726.2	protein_coding	ANTISENSE	ENSG00000250349	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_Xp11.4a	HERV	MER4B	internal	chrX	37968249	37970524	-	noncoding	AF241726.2	protein_coding	ANTISENSE	ENSG00000250349	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_Xp11.4	HERV	LTR57	internal	chrX	37970525	37971075	-	noncoding	AF241726.2	protein_coding	ANTISENSE	ENSG00000250349	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_Xp11.4b	HERV	MER4B	oneside	chrX	37971076	37973325	-	noncoding	AF241726.2	protein_coding	ANTISENSE	ENSG00000250349	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_Xp11.4b	HERV	MER41	oneside	chrX	38026405	38031211	-	noncoding	AF241726.2,SYTL5	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000250349,ENSG00000147041	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_Xp11.4a	HERV	ERVLE	oneside	chrX	38229619	38232955	+	noncoding	AF241726.2	protein_coding	SENSE	ENSG00000250349	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xp11.4a	HERV	ERV316A3	prototype	chrX	38435235	38438684	+	noncoding	AF241726.2	protein_coding	SENSE	ENSG00000250349	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_Xp11.4	HERV	MER61	prototype	chrX	38725936	38731071	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TSPAN7	ENSG00000156298	37016	AF241728.1	ENSG00000235806	39260	None	None
HERVL_Xp11.4	HERV	HERVL	oneside	chrX	38745381	38747020	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AF241728.1	ENSG00000235806	23311	TSPAN7	ENSG00000156298	56461	None	None
ERV316A3_Xp11.4b	HERV	ERV316A3	oneside	chrX	40340354	40341440	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091807.2	ENSG00000214045	17743	AC091806.1	ENSG00000236393	41293	None	None
ERV316A3_Xp11.4c	HERV	ERV316A3	internal	chrX	40347803	40352178	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091807.2	ENSG00000214045	7005	AC091806.1	ENSG00000236393	48742	None	None
ERVLB4_Xp11.4	HERV	ERVLB4	prototype	chrX	40436551	40439492	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091807.2	ENSG00000214045	75825	AC091807.1	ENSG00000206677	53352	None	None
ERV316A3_Xp11.4d	HERV	ERV316A3	oneside	chrX	40523752	40528724	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-164P	ENSG00000238730	6778	AC092473.1	ENSG00000235685	8244	None	None
HUERSP2_Xp11.4	HERV	HUERSP2	internal	chrX	40791611	40792236	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092474.2	ENSG00000237661	39608	AC092474.1	ENSG00000214031	30341	None	None
HERVL40_Xp11.4	HERV	HERVL40	oneside	chrX	40825612	40831021	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092474.2	ENSG00000237661	823	AC092474.1	ENSG00000214031	64342	None	None
ERVLE_Xp11.4b	HERV	ERVLE	internal	chrX	40864597	40865176	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MKRN4P	ENSG00000238222	28592	SDCBPP3	ENSG00000232801	25471	None	None
HERVK11_Xp11.4a	HERV	HERVK11	prototype	chrX	41644222	41648694	+	noncoding	CASK	protein_coding	ANTISENSE	ENSG00000147044	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_Xp11.4c	HERV	MER4B	internal	chrX	41653247	41655457	+	noncoding	CASK	protein_coding	ANTISENSE	ENSG00000147044	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Xp11.4a	HERV	MER4	internal	chrX	42090928	42094297	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATP5MC2P4	ENSG00000228847	4457	AL133329.1	ENSG00000233103	36092	None	None
MER4_Xp11.4b	HERV	MER4	oneside	chrX	42094312	42095780	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATP5MC2P4	ENSG00000228847	2974	AL133329.1	ENSG00000233103	39476	None	None
HERVK11_Xp11.4b	HERV	HERVK11	oneside	chrX	42161343	42164802	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1124P	ENSG00000206896	9477	Z92545.1	ENSG00000228780	10599	None	None
HERVL_Xp11.3a	HERV	HERVL	oneside	chrX	42573054	42574584	+	noncoding	Z93403.1	lncRNA	SENSE	ENSG00000231772	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_Xp11.3a	HERV	ERVLE	internal	chrX	42640432	42642015	+	noncoding	Z93403.1	lncRNA	SENSE	ENSG00000231772	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH19_Xp11.3a	HERV	HERVFH19	prototype	chrX	42762295	42771012	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z94277.1	ENSG00000287223	6403	PPP1R2C	ENSG00000102055	6354	None	None
MER61_Xp11.3a	HERV	MER61	prototype	chrX	42788728	42794910	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL451086.1	ENSG00000270280	205264	PPP1R2C	ENSG00000102055	10565	None	None
ERVLE_Xp11.3b	HERV	ERVLE	oneside	chrX	42940667	42945038	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL451086.1	ENSG00000270280	55136	PPP1R2C	ENSG00000102055	162504	chrX:42943660-42943853	None
MER61_Xp11.3b	HERV	MER61	internal	chrX	42970104	42976488	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL451086.1	ENSG00000270280	23686	PPP1R2C	ENSG00000102055	191941	None	None
ERV316A3_Xp11.3a	HERV	ERV316A3	oneside	chrX	42987259	42989218	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL451086.1	ENSG00000270280	10956	PPP1R2C	ENSG00000102055	209096	None	None
LTR25_Xp11.3	HERV	LTR25	internal	chrX	43177433	43179339	+	noncoding	PINCR	lncRNA	SENSE	ENSG00000224294	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xp11.3b	HERV	ERV316A3	prototype	chrX	43238756	43241113	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PINCR	ENSG00000224294	12158	IMPDH1P4	ENSG00000237206	37012	None	None
ERVLB4_Xp11.3a	HERV	ERVLB4	oneside	chrX	43353633	43356134	-	noncoding	AL023574.1	lncRNA	ANTISENSE	ENSG00000285899	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_Xp11.3c	HERV	ERVLE	internal	chrX	43518498	43521839	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAOA	ENSG00000189221	133068	AL023574.1	ENSG00000285899	79841	None	None
MER4_Xp11.3a	HERV	MER4	internal	chrX	43619349	43624287	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MAOA	ENSG00000189221	30620	AL023574.1	ENSG00000285899	180692	None	None
MER4_Xp11.3b	HERV	MER4	oneside	chrX	43624349	43625828	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAOA	ENSG00000189221	29079	AL023574.1	ENSG00000285899	185692	None	None
HERVIP10FH_Xp11.3	HERV	HERVIP10FH	oneside	chrX	44999167	45004021	-	noncoding	KDM6A	protein_coding	ANTISENSE	ENSG00000147050	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_Xp11.3	HERV	HERVIP10F	oneside	chrX	45004017	45006789	-	noncoding	KDM6A	protein_coding	ANTISENSE	ENSG00000147050	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_Xp11.3	HERV	MER34B	internal	chrX	45202589	45204812	-	noncoding	AC136489.1	lncRNA	ANTISENSE	ENSG00000229491	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Xp11.3c	HERV	MER4	prototype	chrX	45300040	45307560	+	noncoding	AC136489.1	lncRNA	SENSE	ENSG00000229491	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xp11.3b	HERV	HERVL	internal	chrX	45734542	45736651	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR222HG	ENSG00000270069	8560	AC234772.1	ENSG00000204915	2854	None	None
ERVLE_Xp11.3d	HERV	ERVLE	internal	chrX	45988976	45990066	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT18P68	ENSG00000213100	4612	PCNAP3	ENSG00000214009	68685	None	None
ERV316A3_Xp11.3c	HERV	ERV316A3	oneside	chrX	46162801	46166179	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01186	ENSG00000236751	90580	AL034410.1	ENSG00000278838	88866	None	None
HERVW_Xp11.3	HERV	HERVW	oneside	chrX	46186895	46189578	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL034410.1	ENSG00000278838	112960	LINC01186	ENSG00000236751	67181	None	None
ERVL_Xp11.3	HERV	ERVL	oneside	chrX	46351905	46354414	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL139811.3	ENSG00000286306	46272	LINC01186	ENSG00000236751	24225	None	None
ERVLB4_Xp11.3b	HERV	ERVLB4	oneside	chrX	46431469	46432720	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL139811.2	ENSG00000231235	11390	GAPDHP65	ENSG00000235587	6989	None	None
HERVK11_Xp11.3	HERV	HERVK11	oneside	chrX	46486517	46490287	-	noncoding	KRBOX4	protein_coding	ANTISENSE	ENSG00000147121	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_Xp11.3	HERV	HERVL40	oneside	chrX	47125036	47128367	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU12-2P	ENSG00000201659	4304	RGN	ENSG00000130988	31722	None	None
HERVFH19_Xp11.3b	HERV	HERVFH19	prototype	chrX	47285349	47294133	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591503.1	ENSG00000203402	3719	RN7SL785P	ENSG00000266158	4286	None	None
ERVLB4_Xp11.3c	HERV	ERVLB4	oneside	chrX	47395350	47401317	-	noncoding	ZNF157	protein_coding	ANTISENSE	ENSG00000147117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xp11.23a	HERV	ERV316A3	prototype	chrX	47609171	47615053	+	noncoding	SYN1,Z84466.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000008056,ENSG00000283743	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xp11.23b	HERV	ERV316A3	oneside	chrX	47748336	47750677	-	noncoding	CXXC1P1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000187893	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_Xp11.23	HERV	MER41	prototype	chrX	47809182	47814037	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF81	ENSG00000197779	22865	WASF4P	ENSG00000188459	4393	None	None
HERVL40_Xp11.23a	HERV	HERVL40	prototype	chrX	47861370	47866265	-	noncoding	ZNF81	protein_coding	ANTISENSE	ENSG00000197779	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_Xp11.23b	HERV	HERVL40	prototype	chrX	47876353	47879821	-	noncoding	ZNF81	protein_coding	ANTISENSE	ENSG00000197779	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xp11.23a	HERV	ERVLB4	internal	chrX	47890415	47893045	-	noncoding	ZNF81	protein_coding	ANTISENSE	ENSG00000197779	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_Xp11.23	HERV	PABLA	internal	chrX	47934525	47936270	+	noncoding	ZNF81	protein_coding	SENSE	ENSG00000197779	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xp11.23	HERV	HERVL	oneside	chrX	47985710	47987130	+	noncoding	ZNF81,ZNF182,ZNF630	protein_coding,protein_coding,protein_coding	SENSE,ANTISENSE,ANTISENSE	ENSG00000197779,ENSG00000147118,ENSG00000221994	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_Xp11.23	HERV	MER101	internal	chrX	48235524	48236044	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC245047.2	ENSG00000229662	8850	AC245047.3	ENSG00000231568	6565	None	None
ERVLB4_Xp11.23b	HERV	ERVLB4	oneside	chrX	48756178	48759374	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC231533.1	ENSG00000232828	19015	GLOD5	ENSG00000171433	2373	None	None
HARLEQUIN_Xp11.23	HERV	HARLEQUIN	prototype	chrX	48853724	48861796	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PCSK1N	ENSG00000102109	18114	PQBP1	ENSG00000102103	28401	None	None
HERVE_Xp11.23	HERV	HERVE	prototype	chrX	49139563	49149008	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL262P	ENSG00000265033	3643	GPKOW	ENSG00000068394	15828	None	chrX:49148708-49148714
ERV316A3_Xp11.23c	HERV	ERV316A3	internal	chrX	49634729	49636886	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VDAC1P2	ENSG00000213856	1380	SALL1P1	ENSG00000227391	27958	None	None
ERV316A3_Xp11.23d	HERV	ERV316A3	oneside	chrX	49853505	49855494	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	USP27X-AS1	ENSG00000234390	21230	PAGE4	ENSG00000101951	19241	None	None
HERVEA_Xp11.22	HERV	HERVEA	prototype	chrX	50330000	50338720	-	coding	CCNB3	protein_coding	ANTISENSE	ENSG00000147082	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xp11.22	HERV	HERVH	internal	chrX	50723658	50724200	+	noncoding	SHROOM4	protein_coding	ANTISENSE	ENSG00000158352	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_Xp11.22	HERV	HUERSP1	prototype	chrX	50842429	50851499	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	H3P44	ENSG00000226881	53939	SHROOM4	ENSG00000158352	28127	None	None
MER61_Xp11.22a	HERV	MER61	prototype	chrX	50979038	50984288	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB1P15	ENSG00000238190	47490	AC239367.1	ENSG00000227493	46134	None	None
ERV316A3_Xp11.22a	HERV	ERV316A3	internal	chrX	51045789	51046612	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC239367.1	ENSG00000227493	14432	AC239367.2	ENSG00000230926	36206	None	None
ERV316A3_Xp11.22b	HERV	ERV316A3	oneside	chrX	51055137	51059227	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC239367.2	ENSG00000230926	23591	AC239367.1	ENSG00000227493	23780	None	None
ERV316A3_Xp11.22c	HERV	ERV316A3	internal	chrX	51133519	51139979	+	noncoding	LINC01284	lncRNA	ANTISENSE	ENSG00000230317	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xp11.22d	HERV	ERV316A3	internal	chrX	51151293	51151955	-	noncoding	LINC01284	lncRNA	SENSE	ENSG00000230317	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_Xp11.22	HERV	PRIMA4	internal	chrX	51164218	51166974	-	noncoding	LINC01284	lncRNA	SENSE	ENSG00000230317	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xp11.22a	HERV	ERVLB4	oneside	chrX	51343188	51346825	-	noncoding	AC233976.1	lncRNA	SENSE	ENSG00000229151	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xp11.22b	HERV	ERVLB4	internal	chrX	51347038	51348687	-	noncoding	AC233976.1	lncRNA	SENSE	ENSG00000229151	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_Xp11.22	HERV	MER101	oneside	chrX	51416304	51420439	+	noncoding	AL158055.1	lncRNA	SENSE	ENSG00000226530	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xp11.22c	HERV	ERVLB4	oneside	chrX	51448586	51450600	+	noncoding	AL158055.1	lncRNA	SENSE	ENSG00000226530	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_Xp11.22	HERV	HUERSP3	prototype	chrX	51456158	51462181	+	noncoding	AL158055.1	lncRNA	SENSE	ENSG00000226530	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chrX:51456422-51456715	None
MER61_Xp11.22b	HERV	MER61	prototype	chrX	51557828	51564017	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CENPVL3	ENSG00000224109	53007	LINC01496	ENSG00000234766	46823	None	None
MER4B_Xp11.22	HERV	MER4B	prototype	chrX	51769323	51778397	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GSPT2	ENSG00000189369	23091	MAGED1	ENSG00000179222	24610	None	None
ERVLB4_Xp11.22d	HERV	ERVLB4	internal	chrX	52096432	52100050	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAGED4	ENSG00000154545	84773	MAGED4B	ENSG00000187243	27184	None	None
ERVLB4_Xp11.22e	HERV	ERVLB4	oneside	chrX	52328985	52331570	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR8088	ENSG00000275335	4987	AC231759.1	ENSG00000276474	2223	None	None
ERVL_Xp11.22a	HERV	ERVL	oneside	chrX	53150801	53156783	-	noncoding	KANTR	protein_coding	ANTISENSE	ENSG00000232593	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_Xp11.22	HERV	HML6	prototype	chrX	53159114	53163826	-	noncoding	KANTR	protein_coding	ANTISENSE	ENSG00000232593	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chrX:53163476-53163502
HUERSP3B_Xp11.22	HERV	HUERSP3B	prototype	chrX	53164578	53168402	+	noncoding	KANTR	protein_coding	SENSE	ENSG00000232593	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_Xp11.22a	HERV	ERVLE	internal	chrX	53184811	53187244	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KANTR	ENSG00000232593	13897	KDM5C	ENSG00000126012	4077	None	None
ERVL_Xp11.22b	HERV	ERVL	prototype	chrX	53475045	53477118	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VTRNA3-1P	ENSG00000199422	12735	HUWE1	ENSG00000086758	54978	None	None
ERVL_Xp11.22c	HERV	ERVL	unknown	chrX	53482608	53491591	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HUWE1	ENSG00000086758	40505	VTRNA3-1P	ENSG00000199422	20298	None	None
HARLEQUIN_Xp11.22	HERV	HARLEQUIN	prototype	chrX	53512675	53520776	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	VTRNA3-1P	ENSG00000199422	50365	HUWE1	ENSG00000086758	11320	None	None
ERVLE_Xp11.22b	HERV	ERVLE	internal	chrX	53649641	53650544	-	noncoding	HUWE1	protein_coding	SENSE	ENSG00000086758	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_Xp11.22c	HERV	ERVLE	internal	chrX	53761264	53764631	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX323845.1	ENSG00000224735	2060	BX323845.2	ENSG00000226110	4355	None	None
ERVLB4_Xp11.22f	HERV	ERVLB4	oneside	chrX	53869194	53872392	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC233279.1	ENSG00000235916	42885	RNA5SP505	ENSG00000201618	36662	None	None
ERVLE_Xp11.22d	HERV	ERVLE	internal	chrX	53899288	53900937	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC233279.1	ENSG00000235916	72979	RNA5SP505	ENSG00000201618	8117	None	None
MER41_Xp11.22	HERV	MER41	prototype	chrX	53923312	53928800	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP505	ENSG00000201618	14151	PHF8	ENSG00000172943	7876	None	None
ERVLE_Xp11.21	HERV	ERVLE	internal	chrX	54818931	54819968	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049732.1	ENSG00000275387	22046	MAGED2	ENSG00000102316	2916	None	None
PABLA_Xp11.21	HERV	PABLA	internal	chrX	54848252	54851442	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRO	ENSG00000067445	69020	AL049732.1	ENSG00000275387	6118	None	None
MER41_Xp11.21a	HERV	MER41	oneside	chrX	54851533	54852760	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRO	ENSG00000067445	67702	AL049732.1	ENSG00000275387	9399	None	None
MER41_Xp11.21b	HERV	MER41	prototype	chrX	55108769	55111350	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590240.4	ENSG00000278319	6743	AL590240.3	ENSG00000276929	26580	None	None
MER4_Xp11.21a	HERV	MER4	oneside	chrX	55148083	55153271	+	noncoding	FAM104B	protein_coding	ANTISENSE	ENSG00000182518	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Xp11.21b	HERV	MER4	oneside	chrX	55193163	55201484	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PAGE5	ENSG00000158639	18871	MTRNR2L10	ENSG00000256045	10721	None	None
MER41_Xp11.21c	HERV	MER41	oneside	chrX	55266462	55269093	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PAGE3	ENSG00000204279	1616	AL158819.1	ENSG00000232765	10746	None	None
MER41_Xp11.21d	HERV	MER41	oneside	chrX	55272930	55276894	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PAGE3	ENSG00000204279	8084	AL158819.1	ENSG00000232765	2945	None	None
HERVL_Xp11.21a	HERV	HERVL	prototype	chrX	55614743	55619665	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FOXR2	ENSG00000189299	3735	AL627224.2	ENSG00000235136	14637	None	None
MER41_Xp11.21e	HERV	MER41	oneside	chrX	55699994	55702122	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RRAGB	ENSG00000083750	15617	AL159987.1	ENSG00000169164	42980	None	None
MER41_Xp11.21f	HERV	MER41	oneside	chrX	55708606	55712410	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RRAGB	ENSG00000083750	5329	AL159987.1	ENSG00000169164	51592	None	None
ERVLB4_Xp11.21a	HERV	ERVLB4	oneside	chrX	55741699	55747805	-	noncoding	RRAGB	protein_coding	ANTISENSE	ENSG00000083750	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xp11.21	HERV	HERVH	prototype	chrX	55788407	55793405	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL050309.1	ENSG00000227486	114718	RRAGB	ENSG00000083750	29633	None	None
HERVEA_Xp11.21	HERV	HERVEA	prototype	chrX	56024460	56032219	-	noncoding	AL050309.1	lncRNA	ANTISENSE	ENSG00000227486	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chrX:56031538-56031545,chrX:56031618-56031627,chrX:56031824-56031827
MER4B_Xp11.21a	HERV	MER4B	oneside	chrX	56376339	56382857	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	UBQLN2	ENSG00000188021	180782	KLF8	ENSG00000102349	84808	None	None
LTR25_Xp11.21	HERV	LTR25	internal	chrX	56386562	56388483	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBQLN2	ENSG00000188021	175156	KLF8	ENSG00000102349	95031	None	None
HERVL_Xp11.21b	HERV	HERVL	oneside	chrX	56668325	56673692	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NBDY	ENSG00000204272	55549	AL354793.1	ENSG00000230105	43867	None	None
HERVL_Xp11.21c	HERV	HERVL	oneside	chrX	56679851	56681298	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NBDY	ENSG00000204272	47943	AL354793.1	ENSG00000230105	55393	None	None
ERVL_Xp11.21a	HERV	ERVL	internal	chrX	56824111	56826878	-	noncoding	SPIN3	protein_coding	SENSE	ENSG00000204271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_Xp11.21b	HERV	ERVL	oneside	chrX	56833150	56834826	-	noncoding	SPIN3	protein_coding	SENSE	ENSG00000204271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL32_Xp11.21	HERV	HERVL32	prototype	chrX	56862633	56868798	+	noncoding	SPIN3	protein_coding	ANTISENSE	ENSG00000204271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_Xp11.21	HERV	PRIMA41	internal	chrX	56867725	56868591	+	coding	SPIN3	protein_coding	ANTISENSE	ENSG00000204271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_Xp11.21g	HERV	MER41	oneside	chrX	56886902	56890320	+	noncoding	SPIN3	protein_coding	ANTISENSE	ENSG00000204271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_Xp11.21h	HERV	MER41	oneside	chrX	56902875	56906579	+	noncoding	SPIN3	protein_coding	ANTISENSE	ENSG00000204271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11_Xp11.21	HERV	HERVK11	internal	chrX	56942422	56948730	+	noncoding	SPIN3	protein_coding	ANTISENSE	ENSG00000204271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xp11.21d	HERV	HERVL	oneside	chrX	57041670	57046193	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL139397.2	ENSG00000237708	22721	SPIN3	ENSG00000204271	45843	None	None
HERVL40_Xp11.21a	HERV	HERVL40	oneside	chrX	57062530	57064463	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL139397.2	ENSG00000237708	4451	SPIN3	ENSG00000204271	66703	None	None
HML6_Xp11.21	HERV	HML6	prototype	chrX	57102981	57109396	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL139397.2	ENSG00000237708	33296	SPIN2B	ENSG00000186787	9155	None	None
HERVL40_Xp11.21b	HERV	HERVL40	internal	chrX	57113263	57116750	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPIN2B	ENSG00000186787	1801	AL139397.2	ENSG00000237708	43578	None	None
HML3_Xp11.21	HERV	HML3	prototype	chrX	57203018	57209051	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z83745.1	ENSG00000286977	13655	SPIN2A	ENSG00000147059	65393	None	None
HERVH48_Xp11.21	HERV	HERVH48	prototype	chrX	57218928	57224864	+	noncoding	Z83745.1	lncRNA	SENSE	ENSG00000286977	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVW_Xp11.21	HERV	HERVW	prototype	chrX	57398559	57405610	-	noncoding	FAAH2	protein_coding	ANTISENSE	ENSG00000165591	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xp11.21b	HERV	ERVLB4	internal	chrX	57421737	57422585	-	noncoding	FAAH2	protein_coding	ANTISENSE	ENSG00000165591	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xp11.21c	HERV	ERVLB4	internal	chrX	57430203	57431312	-	noncoding	FAAH2	protein_coding	ANTISENSE	ENSG00000165591	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_Xp11.21i	HERV	MER41	internal	chrX	57508333	57510909	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAAH2	ENSG00000165591	19137	ZXDB	ENSG00000198455	80743	None	None
MER41_Xp11.21j	HERV	MER41	internal	chrX	57517660	57519175	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAAH2	ENSG00000165591	28464	ZXDB	ENSG00000198455	72477	None	None
LTR23_Xp11.21	HERV	LTR23	internal	chrX	57646636	57650025	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NLRP2B	ENSG00000215174	27042	ZXDB	ENSG00000198455	49091	None	None
MER61_Xp11.21	HERV	MER61	prototype	chrX	57650579	57656546	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZXDB	ENSG00000198455	53034	NLRP2B	ENSG00000215174	20521	None	None
PRIMA4_Xp11.21	HERV	PRIMA4	internal	chrX	57656547	57662326	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NLRP2B	ENSG00000215174	14741	ZXDB	ENSG00000198455	59002	None	None
MER41_Xp11.21k	HERV	MER41	internal	chrX	57667922	57670179	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NLRP2B	ENSG00000215174	6888	ZXDB	ENSG00000198455	70377	None	None
MER4B_Xp11.21b	HERV	MER4B	oneside	chrX	57779656	57783648	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZXDA	ENSG00000198205	123060	Z93019.1	ENSG00000227427	12364	None	None
HUERSP3_Xp11.21	HERV	HUERSP3	prototype	chrX	57816574	57823244	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZXDA	ENSG00000198205	83464	Z93019.1	ENSG00000227427	49282	chrX:57821729-57822295	None
HML5_Xp11.21	HERV	HML5	oneside	chrX	57876224	57878788	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z93019.1	ENSG00000227427	108932	ZXDA	ENSG00000198205	27920	None	None
HERVL40_Xp11.21c	HERV	HERVL40	oneside	chrX	57929860	57931899	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZXDA	ENSG00000198205	19040	MYCLP2	ENSG00000228004	1938	None	None
HERVL40_Xp11.21d	HERV	HERVL40	internal	chrX	57934839	57936027	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MYCLP2	ENSG00000228004	36	KRT8P17	ENSG00000235124	48659	None	None
MER41_Xp11.21l	HERV	MER41	prototype	chrX	57963280	57966092	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P17	ENSG00000235124	18594	MYCLP2	ENSG00000228004	28477	None	None
HUERSP1_Xp11.21	HERV	HUERSP1	oneside	chrX	57973880	57975514	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P17	ENSG00000235124	9172	MYCLP2	ENSG00000228004	39077	None	None
HERVL_Xp11.21e	HERV	HERVL	prototype	chrX	58046903	58052540	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P17	ENSG00000235124	60770	BX322784.1	ENSG00000236852	4726710	None	None
HERVK11D_Xq11.1	HERV	HERVK11D	prototype	chrX	62707617	62717099	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX322784.1	ENSG00000236852	62151	KRT8P17	ENSG00000235124	4721484	None	None
HML2_Xq11.1	HERV	HML2	oneside	chrX	62740079	62742584	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P17	ENSG00000235124	4753946	BX322784.1	ENSG00000236852	36666	None	None
HML3_Xq11.1	HERV	HML3	prototype	chrX	62753635	62759725	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX322784.1	ENSG00000236852	19525	KRT8P17	ENSG00000235124	4767502	None	None
ERVLB4_Xq11.1a	HERV	ERVLB4	prototype	chrX	62847728	62853750	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTND2P25	ENSG00000228182	3422	ZFRP1	ENSG00000234570	25061	None	None
MER41_Xq11.1a	HERV	MER41	internal	chrX	62929698	62934354	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359854.1	ENSG00000277499	152717	ZFRP1	ENSG00000234570	44856	None	None
MER4_Xq11.1a	HERV	MER4	oneside	chrX	62941366	62942363	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZFRP1	ENSG00000234570	56524	AL359854.1	ENSG00000277499	144708	None	None
MER4_Xq11.1b	HERV	MER4	oneside	chrX	62951760	62959005	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZFRP1	ENSG00000234570	66918	AL359854.1	ENSG00000277499	128066	None	None
PRIMA41_Xq11.1	HERV	PRIMA41	internal	chrX	63040537	63043605	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359854.1	ENSG00000277499	43466	ZFRP1	ENSG00000234570	155695	None	None
HERVFRD_Xq11.1a	HERV	HERVFRD	oneside	chrX	63077380	63083696	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZFRP1	ENSG00000234570	192538	AL359854.1	ENSG00000277499	3375	None	None
HERV4_Xq11.1	HERV	HERV4	internal	chrX	63083834	63086488	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZFRP1	ENSG00000234570	198992	AL359854.1	ENSG00000277499	583	None	None
HERVFRD_Xq11.1b	HERV	HERVFRD	internal	chrX	63087730	63088833	+	noncoding	AL359854.1	processed_pseudogene	SENSE	ENSG00000277499	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_Xq11.1c	HERV	MER4	oneside	chrX	63134217	63135655	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359854.1	ENSG00000277499	45553	LINC01278	ENSG00000235437	87338	None	None
MER41_Xq11.1b	HERV	MER41	prototype	chrX	63135656	63141508	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359854.1	ENSG00000277499	46992	LINC01278	ENSG00000235437	81485	None	None
MER4_Xq11.1d	HERV	MER4	internal	chrX	63141509	63142366	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359854.1	ENSG00000277499	52845	LINC01278	ENSG00000235437	80627	None	None
MER4_Xq11.1e	HERV	MER4	internal	chrX	63178669	63180312	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01278	ENSG00000235437	42681	AL359854.1	ENSG00000277499	90005	None	None
MER4_Xq11.1f	HERV	MER4	oneside	chrX	63186870	63188610	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01278	ENSG00000235437	34383	AL359854.1	ENSG00000277499	98206	None	None
MER4_Xq11.1g	HERV	MER4	internal	chrX	63198633	63200276	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359854.1	ENSG00000277499	109969	LINC01278	ENSG00000235437	22717	None	None
MER4_Xq11.1h	HERV	MER4	internal	chrX	63236583	63237440	-	noncoding	LINC01278	lncRNA	SENSE	ENSG00000235437	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_Xq11.1c	HERV	MER41	unknown	chrX	63237441	63244731	-	noncoding	LINC01278	lncRNA	SENSE	ENSG00000235437	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4B_Xq11.1a	HERV	MER4B	oneside	chrX	63257855	63261076	-	noncoding	LINC01278	lncRNA	SENSE	ENSG00000235437	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4B_Xq11.1b	HERV	MER4B	oneside	chrX	63267012	63272093	-	noncoding	LINC01278	lncRNA	SENSE	ENSG00000235437	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xq11.1a	HERV	HERVL	prototype	chrX	63309763	63317045	-	noncoding	LINC01278	lncRNA	SENSE	ENSG00000235437	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xq11.1b	HERV	ERVLB4	internal	chrX	63322035	63327271	+	noncoding	LINC01278	lncRNA	ANTISENSE	ENSG00000235437	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_Xq11.1	HERV	HML5	prototype	chrX	63358013	63364629	-	noncoding	LINC01278	lncRNA	SENSE	ENSG00000235437	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_Xq11.1	HERV	HARLEQUIN	prototype	chrX	63409033	63416691	+	noncoding	LINC01278	lncRNA	ANTISENSE	ENSG00000235437	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR46_Xq11.1	HERV	LTR46	prototype	chrX	63426553	63434962	-	noncoding	LINC01278	lncRNA	SENSE	ENSG00000235437	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrX:63428407-63428411,chrX:63431605-63431611,chrX:63434314-63434321,chrX:63434343-63434397,chrX:63434402-63434411
MER61_Xq11.1	HERV	MER61	prototype	chrX	63466685	63471338	-	noncoding	LINC01278	lncRNA	SENSE	ENSG00000235437	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xq11.1b	HERV	HERVL	unknown	chrX	63626989	63633740	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARHGEF9	ENSG00000131089	1227	LINC01278	ENSG00000235437	65894	None	None
MER4_Xq11.2a	HERV	MER4	oneside	chrX	63922908	63924859	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARHGEF9	ENSG00000131089	113634	HNRNPDP1	ENSG00000232794	119446	None	None
ERVLB4_Xq11.2	HERV	ERVLB4	internal	chrX	64213387	64218966	-	noncoding	AL356317.2	lncRNA	ANTISENSE	ENSG00000287370	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Xq11.2b	HERV	MER4	oneside	chrX	64426323	64427486	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PFN5P	ENSG00000283349	20187	SHC1P1	ENSG00000230889	4915	None	None
MER4_Xq11.2c	HERV	MER4	internal	chrX	64427573	64432182	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PFN5P	ENSG00000283349	21437	SHC1P1	ENSG00000230889	219	None	chrX:64432176-64432185
MER4_Xq11.2d	HERV	MER4	oneside	chrX	64435691	64436899	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SHC1P1	ENSG00000230889	1546	YWHAZP7	ENSG00000227261	175733	None	None
HERVL_Xq11.2a	HERV	HERVL	prototype	chrX	64450660	64454951	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	YWHAZP7	ENSG00000227261	157681	SHC1P1	ENSG00000230889	16515	None	None
HERVL_Xq11.2b	HERV	HERVL	prototype	chrX	64626166	64632545	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P27	ENSG00000226502	1593	GRPEL2P2	ENSG00000225814	65333	None	None
HERVH_Xq11.2a	HERV	HERVH	oneside	chrX	64651096	64657665	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P27	ENSG00000226502	26523	GRPEL2P2	ENSG00000225814	40213	None	None
HERVL_Xq11.2c	HERV	HERVL	prototype	chrX	64737241	64743851	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZC4H2	ENSG00000126970	171951	BLOC1S2P1	ENSG00000236982	10193	None	None
HML5_Xq11.2a	HERV	HML5	prototype	chrX	64781222	64786832	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZC4H2	ENSG00000126970	128970	BLOC1S2P1	ENSG00000236982	54174	None	None
HERVFH21_Xq11.2a	HERV	HERVFH21	oneside	chrX	64842515	64848198	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BLOC1S2P1	ENSG00000236982	115467	ZC4H2	ENSG00000126970	67604	chrX:64844191-64844461	None
HERVFH21_Xq11.2b	HERV	HERVFH21	oneside	chrX	64848467	64851088	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BLOC1S2P1	ENSG00000236982	121419	ZC4H2	ENSG00000126970	64714	None	chrX:64850990-64850995
HERVH_Xq11.2b	HERV	HERVH	prototype	chrX	65129300	65135094	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445523.1	ENSG00000237971	49924	ZC4H2	ENSG00000126970	94587	None	None
HML5_Xq11.2b	HERV	HML5	oneside	chrX	65195573	65198216	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445523.1	ENSG00000237971	8308	CCT4P2	ENSG00000225569	72697	None	None
MER41_Xq11.2a	HERV	MER41	oneside	chrX	65331593	65332758	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL441964.1	ENSG00000237963	24132	MORF4L1P5	ENSG00000231857	360	None	None
MER41_Xq11.2b	HERV	MER41	oneside	chrX	65332796	65337423	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL441964.1	ENSG00000237963	19467	MORF4L1P5	ENSG00000231857	1563	None	None
HERVH_Xq11.2c	HERV	HERVH	oneside	chrX	65361589	65365949	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL441964.1	ENSG00000237963	4042	ZC3H12B	ENSG00000102053	689	None	None
ERVLB4_Xq12a	HERV	ERVLB4	oneside	chrX	65418398	65422525	+	noncoding	ZC3H12B	protein_coding	SENSE	ENSG00000102053	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xq12b	HERV	ERVLB4	oneside	chrX	65431024	65435944	-	noncoding	ZC3H12B	protein_coding	ANTISENSE	ENSG00000102053	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_Xq12a	HERV	HML3	oneside	chrX	65438453	65440151	-	noncoding	ZC3H12B	protein_coding	ANTISENSE	ENSG00000102053	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_Xq12b	HERV	HML3	internal	chrX	65440169	65442522	-	coding	ZC3H12B	protein_coding	ANTISENSE	ENSG00000102053	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_Xq12c	HERV	HML3	oneside	chrX	65442580	65443849	-	noncoding	ZC3H12B	protein_coding	ANTISENSE	ENSG00000102053	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_Xq12	HERV	HERVIP10FH	prototype	chrX	65927286	65933055	-	noncoding	AL034397.2	lncRNA	ANTISENSE	ENSG00000237311	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_Xq12	HERV	HARLEQUIN	prototype	chrX	66218551	66226301	-	noncoding	HEPH	protein_coding	ANTISENSE	ENSG00000089472	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_Xq12	HERV	HERVW	oneside	chrX	66297178	66299443	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL157698.1	ENSG00000231356	61323	HEPH	ENSG00000089472	28311	None	None
MER4B_Xq12a	HERV	MER4B	internal	chrX	66366844	66367954	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL592049.1	ENSG00000226820	69391	AL157698.1	ENSG00000231356	5068	None	None
HERVL_Xq12a	HERV	HERVL	oneside	chrX	66392934	66396953	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL157698.1	ENSG00000231356	31158	AL592049.1	ENSG00000226820	40392	None	None
HML2_Xq12	HERV	HML2	internal	chrX	66464290	66466342	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PKMP2	ENSG00000235892	31406	AL592049.1	ENSG00000226820	23622	None	None
HERVL_Xq12b	HERV	HERVL	prototype	chrX	66479824	66487544	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PKMP2	ENSG00000235892	10204	AL592049.1	ENSG00000226820	39156	None	None
HERVL_Xq12c	HERV	HERVL	prototype	chrX	66534193	66542102	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PKMP2	ENSG00000235892	34769	EDA2R	ENSG00000131080	53535	None	None
HERVL_Xq12d	HERV	HERVL	oneside	chrX	67002990	67006544	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049641.1	ENSG00000226280	367029	RNU6-394P	ENSG00000222667	326626	None	None
ERVLB4_Xq12c	HERV	ERVLB4	internal	chrX	67806406	67808426	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL157700.1	ENSG00000260118	205044	BMI1P1	ENSG00000234201	13511	None	None
MER4B_Xq12b	HERV	MER4B	oneside	chrX	67880747	67883929	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL157700.1	ENSG00000260118	129541	BMI1P1	ENSG00000234201	87852	None	None
MER4B_Xq12c	HERV	MER4B	internal	chrX	67890094	67896324	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL157700.1	ENSG00000260118	117146	BMI1P1	ENSG00000234201	97199	None	None
HERVH48_Xq13.1	HERV	HERVH48	prototype	chrX	69697035	69703830	-	noncoding	EDA	protein_coding	ANTISENSE	ENSG00000158813	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xq13.1	HERV	HERVL	prototype	chrX	69865233	69871727	-	coding	EDA	protein_coding	ANTISENSE	ENSG00000158813	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_Xq13.1	HERV	MER34B	oneside	chrX	70107638	70109403	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCYBP31	ENSG00000226579	10950	OTUD6A	ENSG00000189401	43459	None	None
HERVH_Xq13.1a	HERV	HERVH	oneside	chrX	71264380	71269610	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZMYM3	ENSG00000147130	9234	NONO	ENSG00000147140	13582	None	None
HERVH_Xq13.1b	HERV	HERVH	oneside	chrX	71270272	71272831	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZMYM3	ENSG00000147130	15126	NONO	ENSG00000147140	10361	None	None
HERV9_Xq13.1	HERV	HERV9	oneside	chrX	71494658	71500000	-	noncoding	TAF1	protein_coding	ANTISENSE	ENSG00000147133	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_Xq13.1a	HERV	HML5	internal	chrX	71699973	71702474	+	noncoding	LINC00891	lncRNA	SENSE	ENSG00000281852	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML5_Xq13.1b	HERV	HML5	internal	chrX	71779101	71781601	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	BX276092.1	ENSG00000224617	7785	CXorf49B	ENSG00000215113	11897	None	None
ERVLB4_Xq13.1	HERV	ERVLB4	internal	chrX	71892125	71894699	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NHSL2	ENSG00000204131	16119	BX119927.1	ENSG00000283178	18830	None	None
MER41_Xq13.1	HERV	MER41	prototype	chrX	71983693	71988929	-	coding	NHSL2	protein_coding	ANTISENSE	ENSG00000204131	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH19_Xq13.1	HERV	HERVFH19	prototype	chrX	72220348	72230604	+	coding	PIN4,ERCC6L	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000102309,ENSG00000186871	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Xq13.1	HERV	MER4	prototype	chrX	72696375	72703208	+	coding	PHKA1,PHKA1-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000067177,ENSG00000231944	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVL_Xq13.2a	HERV	ERVL	oneside	chrX	73008575	73009293	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PABPC1L2A	ENSG00000186288	67983	PABPC1L2B	ENSG00000184388	2862	None	None
ERVL_Xq13.2b	HERV	ERVL	internal	chrX	73012064	73013510	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PABPC1L2A	ENSG00000186288	63766	PABPC1L2B	ENSG00000184388	6351	None	None
PRIMA4_Xq13.2a	HERV	PRIMA4	internal	chrX	73014626	73016726	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PABPC1L2A	ENSG00000186288	60550	PABPC1L2B	ENSG00000184388	8913	None	None
PRIMA4_Xq13.2b	HERV	PRIMA4	internal	chrX	73042441	73044914	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PABPC1L2B	ENSG00000184388	36728	PABPC1L2A	ENSG00000186288	32362	None	None
HERVL_Xq13.2a	HERV	HERVL	oneside	chrX	73044920	73047422	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PABPC1L2A	ENSG00000186288	29854	PABPC1L2B	ENSG00000184388	39207	None	None
HERVL_Xq13.2b	HERV	HERVL	internal	chrX	73047477	73050569	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PABPC1L2A	ENSG00000186288	26707	PABPC1L2B	ENSG00000184388	41764	None	None
HERVL_Xq13.2c	HERV	HERVL	prototype	chrX	73165454	73172117	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NAP1L2	ENSG00000186462	40182	NAP1L6P	ENSG00000204118	37374	None	None
MER4_Xq13.2	HERV	MER4	internal	chrX	73197461	73198308	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NAP1L6P	ENSG00000204118	69381	NAP1L2	ENSG00000186462	13991	None	None
MER61_Xq13.2	HERV	MER61	oneside	chrX	73253964	73256953	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	YWHAZP8	ENSG00000225664	17832	AC004074.1	ENSG00000237014	15255	None	None
HERVI_Xq13.2	HERV	HERVI	oneside	chrX	73256954	73264087	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	YWHAZP8	ENSG00000225664	10698	AC004074.1	ENSG00000237014	18245	None	None
HML3_Xq13.2a	HERV	HML3	oneside	chrX	73318321	73323801	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1044P	ENSG00000207486	73730	YWHAZP8	ENSG00000225664	42806	None	None
HML3_Xq13.2b	HERV	HML3	oneside	chrX	73323862	73325138	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1044P	ENSG00000207486	72393	YWHAZP8	ENSG00000225664	48347	None	None
ERVLE_Xq13.2	HERV	ERVLE	internal	chrX	73395585	73396459	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	YWHAZP8	ENSG00000225664	120070	RNU6-1044P	ENSG00000207486	1072	None	None
HERVH_Xq13.2a	HERV	HERVH	prototype	chrX	73527400	73533947	+	noncoding	MAP2K4P1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000269904	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_Xq13.2a	HERV	MER41	oneside	chrX	73623568	73626174	-	noncoding	CHIC1	protein_coding	ANTISENSE	ENSG00000204116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_Xq13.2	HERV	HML5	prototype	chrX	73658873	73666201	-	noncoding	CHIC1	protein_coding	ANTISENSE	ENSG00000204116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_Xq13.2b	HERV	MER41	oneside	chrX	73798891	73801155	-	noncoding	TSIX	lncRNA	ANTISENSE	ENSG00000270641	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xq13.2b	HERV	HERVH	prototype	chrX	73801458	73809385	-	noncoding	TSIX	lncRNA	ANTISENSE	ENSG00000270641	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL74_Xq13.2a	HERV	HERVL74	internal	chrX	73869769	73872057	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FXYD6P3	ENSG00000182707	3011	XIST	ENSG00000229807	17046	None	None
HERVL74_Xq13.2b	HERV	HERVL74	internal	chrX	74056900	74058912	+	noncoding	FTX,JPX	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000230590,ENSG00000225470	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_Xq13.2c	HERV	HERVL74	oneside	chrX	74059753	74062237	+	noncoding	FTX,JPX	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000230590,ENSG00000225470	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xq13.2c	HERV	HERVH	prototype	chrX	74121599	74130519	-	noncoding	FTX,DDX3P1,AL359740.1	lncRNA,processed_pseudogene,TEC	SENSE,ANTISENSE,SENSE	ENSG00000230590,ENSG00000232928,ENSG00000280375	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrX:74123832-74123842,chrX:74126677-74126682
HUERSP3B_Xq13.2a	HERV	HUERSP3B	oneside	chrX	74134510	74138519	+	noncoding	FTX	lncRNA	ANTISENSE	ENSG00000230590	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_Xq13.2	HERV	HML6	oneside	chrX	74177999	74182492	+	noncoding	FTX	lncRNA	ANTISENSE	ENSG00000230590	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_Xq13.2b	HERV	HUERSP3B	prototype	chrX	74253889	74260438	+	noncoding	FTX	lncRNA	ANTISENSE	ENSG00000230590	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xq13.2a	HERV	ERVLB4	internal	chrX	74366048	74369045	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004386.1	ENSG00000213269	7080	AC004386.2	ENSG00000226515	23188	None	None
MER4B_Xq13.2	HERV	MER4B	prototype	chrX	74484100	74491692	-	noncoding	SLC16A2	protein_coding	ANTISENSE	ENSG00000147100	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xq13.2b	HERV	ERVLB4	prototype	chrX	74678921	74684880	+	noncoding	RNU6-330P	snRNA	SENSE	ENSG00000199885	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_Xq13.3a	HERV	MER41	prototype	chrX	75116664	75122462	+	noncoding	ABCB7	protein_coding	ANTISENSE	ENSG00000131269	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR46_Xq13.3	HERV	LTR46	prototype	chrX	75203449	75212180	-	noncoding	UPRT	protein_coding	ANTISENSE	ENSG00000094841	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_Xq13.3	HERV	HML3	prototype	chrX	75323194	75329861	+	noncoding	AL137013.1	processed_pseudogene	ANTISENSE	ENSG00000232186	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_Xq13.3b	HERV	MER41	prototype	chrX	75361643	75367270	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137013.1	ENSG00000232186	33644	ZDHHC15	ENSG00000102383	1157	None	None
HERVL_Xq13.3a	HERV	HERVL	prototype	chrX	75392070	75394166	-	noncoding	ZDHHC15	protein_coding	SENSE	ENSG00000102383	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xq13.3	HERV	ERVLB4	prototype	chrX	75444803	75449296	+	noncoding	ZDHHC15	protein_coding	ANTISENSE	ENSG00000102383	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xq13.3b	HERV	HERVL	prototype	chrX	75470018	75474643	+	noncoding	ZDHHC15	protein_coding	ANTISENSE	ENSG00000102383	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xq13.3a	HERV	HERVH	prototype	chrX	75631547	75637730	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTC3P1	ENSG00000215105	103101	BRAFP1	ENSG00000224775	46041	None	None
HARLEQUIN_Xq13.3	HERV	HARLEQUIN	oneside	chrX	75642621	75648589	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTC3P1	ENSG00000215105	92242	BRAFP1	ENSG00000224775	57115	None	chrX:75648569-75648573
HERVH_Xq13.3b	HERV	HERVH	oneside	chrX	75855966	75859573	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SAR1AP4	ENSG00000233063	24973	MAGEE2	ENSG00000186675	70712	None	None
HERVP71A_Xq13.3	HERV	HERVP71A	oneside	chrX	75892105	75894001	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL451105.2	ENSG00000226854	9104	AL451105.1	ENSG00000226753	3217	None	None
HERVW_Xq13.3	HERV	HERVW	prototype	chrX	75898297	75905073	-	noncoding	AL451105.2	lncRNA	ANTISENSE	ENSG00000226854	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xq13.3c	HERV	HERVL	prototype	chrX	75908412	75909983	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL451105.2	ENSG00000226854	3554	AC233982.1	ENSG00000232332	119912	None	None
HERVH48_Xq13.3	HERV	HERVH48	prototype	chrX	75963659	75969847	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC233982.1	ENSG00000232332	60048	AL451105.2	ENSG00000226854	58801	None	None
MER4B_Xq13.3	HERV	MER4B	internal	chrX	76146255	76148830	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PBDC1	ENSG00000102390	24210	AC233982.1	ENSG00000232332	115925	chrX:76148355-76148695	chrX:76147430-76147435
HERVFRD_Xq13.3	HERV	HERVFRD	oneside	chrX	76249208	76254661	-	noncoding	AC233981.2	processed_pseudogene	SENSE	ENSG00000274398	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xq13.3d	HERV	HERVL	prototype	chrX	76511855	76518412	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAGEE1	ENSG00000198934	80513	RNA5SP508	ENSG00000223259	136597	None	None
HUERSP3_Xq13.3a	HERV	HUERSP3	oneside	chrX	76538297	76542584	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP508	ENSG00000223259	112425	MAGEE1	ENSG00000198934	106955	None	None
HUERSP3_Xq13.3b	HERV	HUERSP3	oneside	chrX	76550871	76557432	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP508	ENSG00000223259	97577	MAGEE1	ENSG00000198934	119529	None	None
HERVL18_Xq13.3	HERV	HERVL18	prototype	chrX	76796466	76803137	+	noncoding	AC233296.1	lncRNA	ANTISENSE	ENSG00000280870	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_Xq21.1a	HERV	HERVP71A	oneside	chrX	77067946	77070233	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP509	ENSG00000201447	1119	SPRYD7P1	ENSG00000234404	303979	None	None
HML3_Xq21.1a	HERV	HML3	prototype	chrX	77077638	77081927	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP509	ENSG00000201447	10811	SPRYD7P1	ENSG00000234404	292285	None	None
HERVP71A_Xq21.1b	HERV	HERVP71A	oneside	chrX	77082594	77086675	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP509	ENSG00000201447	15767	SPRYD7P1	ENSG00000234404	287537	None	None
HERVL_Xq21.1a	HERV	HERVL	prototype	chrX	77121724	77128577	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP509	ENSG00000201447	54897	SPRYD7P1	ENSG00000234404	245635	None	None
HERVEA_Xq21.1	HERV	HERVEA	prototype	chrX	77293580	77302601	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP509	ENSG00000201447	226753	SPRYD7P1	ENSG00000234404	71611	None	None
PRIMA41_Xq21.1	HERV	PRIMA41	oneside	chrX	77818565	77820237	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAGT1	ENSG00000102158	6127	ATRX	ENSG00000085224	32332	None	None
HERVL_Xq21.1b	HERV	HERVL	oneside	chrX	78173622	78175909	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYSLTR1	ENSG00000173198	95559	FNDC3CP	ENSG00000223592	1200	None	None
HML5_Xq21.1a	HERV	HML5	prototype	chrX	78213293	78218133	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYSLTR1	ENSG00000173198	53335	FNDC3CP	ENSG00000223592	40871	None	None
HERVW_Xq21.1a	HERV	HERVW	oneside	chrX	78346606	78350527	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN1P34	ENSG00000224755	169066	CYSLTR1	ENSG00000173198	18915	None	None
HUERSP1_Xq21.1a	HERV	HUERSP1	oneside	chrX	78441955	78443095	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN1P34	ENSG00000224755	76498	CYSLTR1	ENSG00000173198	114264	None	None
ERVLB4_Xq21.1a	HERV	ERVLB4	internal	chrX	78526210	78531215	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN1P34	ENSG00000224755	6024	UBE2V1P7	ENSG00000235061	23197	None	None
ERVLB4_Xq21.1b	HERV	ERVLB4	prototype	chrX	78990806	78996168	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	P2RY10BP	ENSG00000232168	88768	P2RY10	ENSG00000078589	27079	None	None
MER61_Xq21.1a	HERV	MER61	internal	chrX	79018523	79020481	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	P2RY10	ENSG00000078589	54796	P2RY10BP	ENSG00000232168	64455	None	None
ERVLB4_Xq21.1c	HERV	ERVLB4	internal	chrX	79049695	79054423	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	P2RY10BP	ENSG00000232168	30513	P2RY10	ENSG00000078589	85968	None	None
ERVL_Xq21.1a	HERV	ERVL	internal	chrX	79351332	79353473	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KIF4CP	ENSG00000225025	26115	ITM2A	ENSG00000078596	6911	None	None
MER4_Xq21.1a	HERV	MER4	oneside	chrX	79455176	79462438	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL009028.1	ENSG00000270268	85011	TBX22	ENSG00000122145	552315	None	None
MER4_Xq21.1b	HERV	MER4	oneside	chrX	79470811	79472282	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL009028.1	ENSG00000270268	100646	TBX22	ENSG00000122145	542471	None	None
MER61_Xq21.1b	HERV	MER61	oneside	chrX	79506136	79507342	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL009028.1	ENSG00000270268	135971	TBX22	ENSG00000122145	507411	None	None
MER61_Xq21.1c	HERV	MER61	oneside	chrX	79511168	79516311	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL009028.1	ENSG00000270268	141003	TBX22	ENSG00000122145	498442	None	None
HERVFRD_Xq21.1a	HERV	HERVFRD	prototype	chrX	79721054	79727688	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL009028.1	ENSG00000270268	350889	TBX22	ENSG00000122145	287065	None	None
HERV4_Xq21.1	HERV	HERV4	internal	chrX	79724930	79726347	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL009028.1	ENSG00000270268	354765	TBX22	ENSG00000122145	288406	None	None
MER4B_Xq21.1a	HERV	MER4B	internal	chrX	79728683	79731109	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL009028.1	ENSG00000270268	358518	TBX22	ENSG00000122145	283644	None	None
HERVL_Xq21.1c	HERV	HERVL	oneside	chrX	79736447	79739095	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL009028.1	ENSG00000270268	366282	TBX22	ENSG00000122145	275658	None	None
PRIMA4_Xq21.1a	HERV	PRIMA4	prototype	chrX	79818632	79828808	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TBX22	ENSG00000122145	185945	AL009028.1	ENSG00000270268	448467	None	None
HERVL_Xq21.1d	HERV	HERVL	prototype	chrX	79848732	79855441	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL009028.1	ENSG00000270268	478567	TBX22	ENSG00000122145	159312	None	None
HERVW_Xq21.1b	HERV	HERVW	prototype	chrX	79955891	79963094	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL009028.1	ENSG00000270268	585726	TBX22	ENSG00000122145	51659	None	None
HML3_Xq21.1b	HERV	HML3	prototype	chrX	80042634	80048272	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TBX22	ENSG00000122145	10860	CHMP1B2P	ENSG00000278530	180217	None	None
MER4_Xq21.1c	HERV	MER4	prototype	chrX	80097630	80105869	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TBX22	ENSG00000122145	65856	CHMP1B2P	ENSG00000278530	122620	None	None
ERVLB4_Xq21.1d	HERV	ERVLB4	oneside	chrX	80169816	80170920	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CHMP1B2P	ENSG00000278530	57569	TBX22	ENSG00000122145	138042	None	None
HERVFRD_Xq21.1b	HERV	HERVFRD	prototype	chrX	80232775	80239413	-	noncoding	CHMP1B2P	transcribed_unitary_pseudogene	SENSE	ENSG00000278530	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
LTR25_Xq21.1a	HERV	LTR25	internal	chrX	80312695	80317563	+	coding	CHMP1B2P	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000278530	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Xq21.1d	HERV	MER4	oneside	chrX	80403797	80405239	-	noncoding	TENT5D	protein_coding	ANTISENSE	ENSG00000174016	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Xq21.1e	HERV	MER4	internal	chrX	80411260	80413382	-	coding	TENT5D	protein_coding	ANTISENSE	ENSG00000174016	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Xq21.1f	HERV	MER4	oneside	chrX	80413815	80414900	-	noncoding	TENT5D	protein_coding	ANTISENSE	ENSG00000174016	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_Xq21.1b	HERV	LTR25	prototype	chrX	80423250	80433342	-	noncoding	TENT5D	protein_coding	ANTISENSE	ENSG00000174016	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_Xq21.1b	HERV	HML5	oneside	chrX	80469061	80472284	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TENT5D	ENSG00000174016	23750	HNRNPH3P1	ENSG00000230247	56753	None	None
HUERSP3_Xq21.1a	HERV	HUERSP3	oneside	chrX	80477564	80484436	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TENT5D	ENSG00000174016	32253	HNRNPH3P1	ENSG00000230247	44601	None	None
LTR57_Xq21.1	HERV	LTR57	internal	chrX	80486852	80487899	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TENT5D	ENSG00000174016	41541	HNRNPH3P1	ENSG00000230247	41138	None	None
LTR25_Xq21.1c	HERV	LTR25	internal	chrX	80512828	80515196	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPH3P1	ENSG00000230247	13841	TENT5D	ENSG00000174016	67517	None	None
HERVL_Xq21.1e	HERV	HERVL	oneside	chrX	80522811	80528183	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TENT5D	ENSG00000174016	77500	HNRNPH3P1	ENSG00000230247	854	None	None
MER4_Xq21.1g	HERV	MER4	oneside	chrX	80587342	80588446	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HK2P1	ENSG00000228612	12735	BRWD3	ENSG00000165288	81057	None	None
ERVL_Xq21.1b	HERV	ERVL	oneside	chrX	80765000	80766448	+	noncoding	BRWD3	protein_coding	ANTISENSE	ENSG00000165288	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_Xq21.1b	HERV	MER4B	oneside	chrX	80847232	80854970	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590031.1	ENSG00000239008	2106	BRWD3	ENSG00000165288	37355	None	None
MER4_Xq21.1h	HERV	MER4	oneside	chrX	80898077	80900184	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590031.1	ENSG00000239008	40875	RNU6-493P	ENSG00000212623	573	None	None
ERVLE_Xq21.1a	HERV	ERVLE	internal	chrX	81072444	81073194	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN5	ENSG00000198157	40505	AL391294.1	ENSG00000284618	68227	None	None
ERV316A3_Xq21.1a	HERV	ERV316A3	oneside	chrX	81389978	81391887	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445213.1	ENSG00000224523	17051	AL359885.1	ENSG00000231875	25808	None	None
HERVL_Xq21.1f	HERV	HERVL	oneside	chrX	81437017	81439171	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445213.2	ENSG00000288059	36361	AL445213.1	ENSG00000224523	9741	None	None
ERV316A3_Xq21.1b	HERV	ERV316A3	oneside	chrX	81467211	81469203	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445213.2	ENSG00000288059	6329	AL445213.1	ENSG00000224523	39935	None	None
HERVL_Xq21.1g	HERV	HERVL	prototype	chrX	81615517	81621691	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL691517.1	ENSG00000233446	14211	RNU6-974P	ENSG00000206826	379529	None	None
HERV30_Xq21.1	HERV	HERV30	prototype	chrX	81805740	81812516	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-974P	ENSG00000206826	188704	AL691517.1	ENSG00000233446	204434	None	None
HUERSP1_Xq21.1b	HERV	HUERSP1	internal	chrX	81869990	81871217	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-974P	ENSG00000206826	130003	AL691517.1	ENSG00000233446	268684	None	None
ERVLB4_Xq21.1e	HERV	ERVLB4	oneside	chrX	81889968	81891796	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL691517.1	ENSG00000233446	288662	RNU6-974P	ENSG00000206826	109424	None	None
ERVLE_Xq21.1b	HERV	ERVLE	internal	chrX	81918280	81919306	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL691517.1	ENSG00000233446	316974	RNU6-974P	ENSG00000206826	81914	None	None
MER4_Xq21.1i	HERV	MER4	oneside	chrX	81948530	81954070	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL691517.1	ENSG00000233446	347224	RNU6-974P	ENSG00000206826	47150	None	None
ERVLB4_Xq21.1f	HERV	ERVLB4	prototype	chrX	82014932	82021868	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-974P	ENSG00000206826	13605	AL031313.1	ENSG00000228041	475801	None	None
MER61_Xq21.1d	HERV	MER61	prototype	chrX	82031888	82036564	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-974P	ENSG00000206826	30561	AL031313.1	ENSG00000228041	461105	None	None
ERVL_Xq21.1c	HERV	ERVL	oneside	chrX	82052632	82054635	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031313.1	ENSG00000228041	443034	RNU6-974P	ENSG00000206826	51305	None	None
LTR25_Xq21.1d	HERV	LTR25	internal	chrX	82081148	82086221	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031313.1	ENSG00000228041	411448	RNU6-974P	ENSG00000206826	79821	None	None
MER4B_Xq21.1c	HERV	MER4B	oneside	chrX	82091184	82092562	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031313.1	ENSG00000228041	405107	RNU6-974P	ENSG00000206826	89857	None	None
HERVFH19_Xq21.1	HERV	HERVFH19	internal	chrX	82142828	82146169	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-974P	ENSG00000206826	141501	AL031313.1	ENSG00000228041	351500	None	None
MER4_Xq21.1j	HERV	MER4	oneside	chrX	82277851	82283458	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-974P	ENSG00000206826	276524	AL031313.1	ENSG00000228041	214211	None	None
HERVL18_Xq21.1a	HERV	HERVL18	internal	chrX	82361942	82364103	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031313.1	ENSG00000228041	133566	RNU6-974P	ENSG00000206826	360615	None	None
MER61_Xq21.1e	HERV	MER61	internal	chrX	82366639	82367663	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031313.1	ENSG00000228041	130006	RNU6-974P	ENSG00000206826	365312	None	None
HERVL18_Xq21.1b	HERV	HERVL18	oneside	chrX	82371109	82373927	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031313.1	ENSG00000228041	123742	RNU6-974P	ENSG00000206826	369782	None	None
ERVLB4_Xq21.1g	HERV	ERVLB4	prototype	chrX	82508411	82510093	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL22P22	ENSG00000213653	1599	AL109931.1	ENSG00000202183	51108	None	None
MER41_Xq21.1a	HERV	MER41	internal	chrX	82556528	82559745	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL22P22	ENSG00000213653	49716	AL109931.1	ENSG00000202183	1456	None	None
HUERSP3_Xq21.1b	HERV	HUERSP3	oneside	chrX	82647664	82652018	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL008987.1	ENSG00000236365	223631	AL109931.1	ENSG00000202183	86317	None	None
ERVL_Xq21.1d	HERV	ERVL	oneside	chrX	82655760	82661723	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL008987.1	ENSG00000236365	213926	AL109931.1	ENSG00000202183	94413	None	None
MER4_Xq21.1n	HERV	MER4	tandem*	chrX	82663145	82671922	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL008987.1	ENSG00000236365	203727	AL109931.1	ENSG00000202183	101798	None	None
HERVH_Xq21.1	HERV	HERVH	prototype	chrX	82726766	82732949	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL109931.1	ENSG00000202183	165419	AL008987.1	ENSG00000236365	142700	chrX:82729136-82729368	None
MER4B_Xq21.1d	HERV	MER4B	oneside	chrX	82739759	82748030	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL008987.1	ENSG00000236365	127619	AL109931.1	ENSG00000202183	178412	None	chrX:82747528-82747577,chrX:82747713-82747717
ERVLE_Xq21.1c	HERV	ERVLE	internal	chrX	82784525	82785951	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL109931.1	ENSG00000202183	223178	AL008987.1	ENSG00000236365	89698	None	None
ERVLB4_Xq21.1h	HERV	ERVLB4	oneside	chrX	82785952	82787452	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL109931.1	ENSG00000202183	224605	AL008987.1	ENSG00000236365	88197	None	None
ERVLB4_Xq21.1j	HERV	ERVLB4	tandem*	chrX	82796020	82802515	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL109931.1	ENSG00000202183	234673	AL008987.1	ENSG00000236365	73134	None	None
HUERSP3_Xq21.1c	HERV	HUERSP3	prototype	chrX	83007619	83015945	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z82170.1	ENSG00000279437	490078	ATG4AP1	ENSG00000232735	8383	None	None
MER41_Xq21.1b	HERV	MER41	internal	chrX	83163882	83165080	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATG4AP1	ENSG00000232735	164646	Z82170.1	ENSG00000279437	340943	None	None
HERVL_Xq21.1h	HERV	HERVL	prototype	chrX	83172449	83178944	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z82170.1	ENSG00000279437	327079	ATG4AP1	ENSG00000232735	173213	None	None
LTR25_Xq21.1e	HERV	LTR25	internal	chrX	83178945	83181735	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z82170.1	ENSG00000279437	324288	ATG4AP1	ENSG00000232735	179709	None	None
ERV316A3_Xq21.1c	HERV	ERV316A3	oneside	chrX	83888534	83890106	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS6KA6	ENSG00000072133	168240	CYLC1	ENSG00000183035	1835	None	None
ERVLB4_Xq21.1i	HERV	ERVLB4	oneside	chrX	83905174	83906548	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS6KA6	ENSG00000072133	151798	CYLC1	ENSG00000183035	18475	None	None
ERVL_Xq21.1e	HERV	ERVL	oneside	chrX	83991429	83992003	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS6KA6	ENSG00000072133	66343	CYLC1	ENSG00000183035	104730	None	None
PRIMA4_Xq21.1b	HERV	PRIMA4	oneside	chrX	84001388	84008821	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CYLC1	ENSG00000183035	114689	RPS6KA6	ENSG00000072133	49525	None	None
PRIMA4_Xq21.1c	HERV	PRIMA4	oneside	chrX	84013659	84015812	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYLC1	ENSG00000183035	126960	RPS6KA6	ENSG00000072133	42534	None	None
MER4_Xq21.1k	HERV	MER4	internal	chrX	84015813	84019424	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS6KA6	ENSG00000072133	38922	CYLC1	ENSG00000183035	129114	None	None
MER4_Xq21.1l	HERV	MER4	internal	chrX	84019648	84020968	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS6KA6	ENSG00000072133	37378	CYLC1	ENSG00000183035	132949	None	None
MER4_Xq21.1m	HERV	MER4	internal	chrX	84020993	84021636	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS6KA6	ENSG00000072133	36710	CYLC1	ENSG00000183035	134294	None	None
MER61_Xq21.1f	HERV	MER61	oneside	chrX	84656775	84659633	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SETP4	ENSG00000237211	95503	HDX	ENSG00000165259	154296	None	None
MER61_Xq21.1g	HERV	MER61	oneside	chrX	84737352	84738499	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HDX	ENSG00000165259	234873	SETP4	ENSG00000237211	16637	None	None
HERVFH21_Xq21.1	HERV	HERVFH21	prototype	chrX	84738500	84745112	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HDX	ENSG00000165259	236021	SETP4	ENSG00000237211	10024	chrX:84743674-84743690	chrX:84738973-84738979
MER61_Xq21.1h	HERV	MER61	oneside	chrX	84745113	84748292	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HDX	ENSG00000165259	242634	SETP4	ENSG00000237211	6844	None	None
PABLA_Xq21.1	HERV	PABLA	internal	chrX	84813277	84816816	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2DNL	ENSG00000229547	117335	SETP4	ENSG00000237211	57274	None	None
MER41_Xq21.1c	HERV	MER41	oneside	chrX	84819310	84821106	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2DNL	ENSG00000229547	113045	SETP4	ENSG00000237211	63307	None	None
MER4B_Xq21.1e	HERV	MER4B	prototype	chrX	84854937	84863907	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2DNL	ENSG00000229547	70244	SETP4	ENSG00000237211	98934	None	chrX:84863412-84863416
MER4B_Xq21.1f	HERV	MER4B	oneside	chrX	84869978	84873975	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SETP4	ENSG00000237211	113975	UBE2DNL	ENSG00000229547	60176	None	None
MER4B_Xq21.1g	HERV	MER4B	internal	chrX	84940702	84944682	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z83820.1	ENSG00000230781	28535	UBE2DNL	ENSG00000229547	5812	None	None
HARLEQUIN_Xq21.1	HERV	HARLEQUIN	prototype	chrX	84944684	84952116	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2DNL	ENSG00000229547	9794	Z83820.1	ENSG00000230781	21101	None	None
MER4B_Xq21.1h	HERV	MER4B	oneside	chrX	84954658	84958316	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z83820.1	ENSG00000230781	14901	UBE2DNL	ENSG00000229547	19768	None	None
HERVFRD_Xq21.1c	HERV	HERVFRD	prototype	chrX	85112359	85116781	-	noncoding	SATL1	protein_coding	SENSE	ENSG00000184788	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL74_Xq21.2	HERV	HERVL74	internal	chrX	85678371	85679091	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POF1B	ENSG00000124429	298654	MIR1321	ENSG00000283435	156689	None	None
HUERSP3B_Xq21.2	HERV	HUERSP3B	prototype	chrX	85811936	85820285	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POF1B	ENSG00000124429	432219	MIR1321	ENSG00000283435	15495	None	None
HERVL_Xq21.2a	HERV	HERVL	prototype	chrX	86306403	86312863	+	noncoding	DACH2	protein_coding	SENSE	ENSG00000126733	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_Xq21.2	HERV	LTR25	internal	chrX	86316583	86324032	-	noncoding	DACH2	protein_coding	ANTISENSE	ENSG00000126733	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xq21.2b	HERV	HERVL	prototype	chrX	86410979	86415039	-	noncoding	DACH2	protein_coding	ANTISENSE	ENSG00000126733	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xq21.2c	HERV	HERVL	oneside	chrX	86780552	86781707	-	noncoding	DACH2	protein_coding	ANTISENSE	ENSG00000126733	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xq21.2	HERV	ERVLB4	oneside	chrX	86861009	86867126	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DACH2	ENSG00000126733	28405	Z82210.1	ENSG00000236190	21460	None	None
HERVL_Xq21.2d	HERV	HERVL	oneside	chrX	86871969	86875020	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	DACH2	ENSG00000126733	39365	Z82210.1	ENSG00000236190	13566	None	None
HERVL_Xq21.2e	HERV	HERVL	oneside	chrX	86900131	86901815	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590229.2	ENSG00000271457	242039	Z82210.1	ENSG00000236190	11315	None	None
HERVH_Xq21.2	HERV	HERVH	prototype	chrX	86981884	86987487	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z82210.1	ENSG00000236190	93068	AL590229.2	ENSG00000271457	156367	None	None
ERV316A3_Xq21.31a	HERV	ERV316A3	internal	chrX	87161951	87164931	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z96811.1	ENSG00000230478	260652	AL590229.1	ENSG00000200422	15147	None	None
ERVLB4_Xq21.31a	HERV	ERVLB4	internal	chrX	87165125	87166344	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z96811.1	ENSG00000230478	259239	AL590229.1	ENSG00000200422	18321	None	None
HERVL_Xq21.31a	HERV	HERVL	prototype	chrX	87222813	87228706	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590229.1	ENSG00000200422	76009	Z96811.1	ENSG00000230478	196877	None	None
HERVL_Xq21.31b	HERV	HERVL	oneside	chrX	87237348	87238573	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z96811.1	ENSG00000230478	187010	AL590229.1	ENSG00000200422	90544	None	None
HERVFRD_Xq21.31a	HERV	HERVFRD	oneside	chrX	87263957	87265962	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z96811.1	ENSG00000230478	159621	AL590229.1	ENSG00000200422	117153	chrX:87265622-87265736	None
MER4_Xq21.31a	HERV	MER4	oneside	chrX	87314046	87315284	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590229.1	ENSG00000200422	167242	Z96811.1	ENSG00000230478	110299	None	None
HERVL_Xq21.31c	HERV	HERVL	prototype	chrX	87349078	87356062	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	Z96811.1	ENSG00000230478	69521	AL590229.1	ENSG00000200422	202274	None	None
HERVH_Xq21.31a	HERV	HERVH	prototype	chrX	87681680	87687644	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KLHL4	ENSG00000102271	11630	RPSAP15	ENSG00000237506	15699	None	None
MER61_Xq21.31a	HERV	MER61	prototype	chrX	87723851	87728831	-	noncoding	Z83818.2	lncRNA	SENSE	ENSG00000282914	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chrX:87728638-87728643,chrX:87728649-87728684,chrX:87728685-87728696
HERV4_Xq21.31a	HERV	HERV4	oneside	chrX	87754475	87756434	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136363.1	ENSG00000270446	49999	Z83818.2	ENSG00000282914	3592	None	None
HERVL_Xq21.31d	HERV	HERVL	internal	chrX	87876330	87879293	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136363.2	ENSG00000271056	66447	AL035246.1	ENSG00000230706	182297	None	None
ERVLB4_Xq21.31b	HERV	ERVLB4	internal	chrX	87996663	87999924	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136363.2	ENSG00000271056	186780	AL035246.1	ENSG00000230706	61666	None	None
MER4_Xq21.31b	HERV	MER4	internal	chrX	88090670	88093530	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CAPZA1P	ENSG00000230956	2863	AL035246.1	ENSG00000230706	27826	None	None
LTR57_Xq21.31	HERV	LTR57	internal	chrX	88093531	88094740	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CAPZA1P	ENSG00000230956	1653	AL035246.1	ENSG00000230706	30687	None	None
MER4_Xq21.31c	HERV	MER4	internal	chrX	88094741	88098939	-	coding	CAPZA1P	processed_pseudogene	SENSE	ENSG00000230956	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chrX:88096154-88096530,chrX:88096545-88096908	chrX:88098513-88098514,chrX:88097258-88097260
HERVL_Xq21.31e	HERV	HERVL	prototype	chrX	88156061	88160307	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL024493.1	ENSG00000252016	7143	AL929325.1	ENSG00000271693	209036	None	None
ERVLB4_Xq21.31c	HERV	ERVLB4	prototype	chrX	88216128	88225984	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL024493.1	ENSG00000252016	67210	AL929325.1	ENSG00000271693	143359	None	None
ERV316A3_Xq21.31b	HERV	ERV316A3	oneside	chrX	88298304	88301775	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL929325.1	ENSG00000271693	67568	AL024493.1	ENSG00000252016	149386	None	None
MER4_Xq21.31d	HERV	MER4	prototype	chrX	88464223	88470833	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL929325.1	ENSG00000271693	94764	CPXCR1	ENSG00000147183	276392	None	None
HERVL74_Xq21.31a	HERV	HERVL74	internal	chrX	88567534	88568183	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL929325.1	ENSG00000271693	198075	CPXCR1	ENSG00000147183	179042	None	None
HERVL74_Xq21.31b	HERV	HERVL74	internal	chrX	88568286	88568974	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL929325.1	ENSG00000271693	198827	CPXCR1	ENSG00000147183	178251	None	None
MER61_Xq21.31b	HERV	MER61	oneside	chrX	88605061	88605986	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL929325.1	ENSG00000271693	235602	CPXCR1	ENSG00000147183	141239	None	None
MER61_Xq21.31c	HERV	MER61	internal	chrX	88769225	88771011	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CPXCR1	ENSG00000147183	14440	AL022154.1	ENSG00000271157	56543	None	None
HERVL_Xq21.31f	HERV	HERVL	oneside	chrX	88830991	88833589	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645638.1	ENSG00000232576	74814	AL022154.1	ENSG00000271157	1133	None	None
HML1_Xq21.31	HERV	HML1	prototype	chrX	88842310	88848834	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645638.1	ENSG00000232576	59569	AL022154.1	ENSG00000271157	12452	None	None
PABLA_Xq21.31a	HERV	PABLA	internal	chrX	88938848	88941405	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL731768.1	ENSG00000270745	40810	AL645638.1	ENSG00000232576	30085	None	None
MER4_Xq21.31e	HERV	MER4	oneside	chrX	88982498	88984199	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SRIP2	ENSG00000224065	383236	AL731768.1	ENSG00000270745	145	None	None
MER4_Xq21.31f	HERV	MER4	internal	chrX	88984585	88985972	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL731768.1	ENSG00000270745	2232	SRIP2	ENSG00000224065	381463	None	None
MER4_Xq21.31g	HERV	MER4	oneside	chrX	88986493	88990433	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL731768.1	ENSG00000270745	4140	SRIP2	ENSG00000224065	377002	None	None
ERVLE_Xq21.31a	HERV	ERVLE	internal	chrX	89093097	89094054	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL731768.1	ENSG00000270745	110744	SRIP2	ENSG00000224065	273381	None	None
ERVLB4_Xq21.31d	HERV	ERVLB4	internal	chrX	89103169	89103747	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL731768.1	ENSG00000270745	120816	SRIP2	ENSG00000224065	263688	None	None
MER61_Xq21.31d	HERV	MER61	prototype	chrX	89266094	89271822	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SRIP2	ENSG00000224065	95613	AL731768.1	ENSG00000270745	283741	None	None
ERVLE_Xq21.31b	HERV	ERVLE	internal	chrX	89338206	89341135	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SRIP2	ENSG00000224065	26300	AL731768.1	ENSG00000270745	355853	None	None
ERVLE_Xq21.31c	HERV	ERVLE	internal	chrX	89368011	89369635	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SRIP2	ENSG00000224065	411	AL121872.1	ENSG00000225012	54103	None	None
HERVL_Xq21.31g	HERV	HERVL	oneside	chrX	89480945	89481630	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121872.1	ENSG00000225012	33962	TGIF2LX	ENSG00000153779	440278	None	None
PABLA_Xq21.31b	HERV	PABLA	internal	chrX	89528321	89532877	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TGIF2LX	ENSG00000153779	389031	AL121872.1	ENSG00000225012	81338	None	None
ERVLB4_Xq21.31e	HERV	ERVLB4	oneside	chrX	89547985	89550097	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TGIF2LX	ENSG00000153779	371811	AL121872.1	ENSG00000225012	101002	None	None
ERVLB4_Xq21.31f	HERV	ERVLB4	internal	chrX	89550111	89554105	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121872.1	ENSG00000225012	103128	TGIF2LX	ENSG00000153779	367803	None	None
MER34B_Xq21.31	HERV	MER34B	internal	chrX	89554588	89556238	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121872.1	ENSG00000225012	107605	TGIF2LX	ENSG00000153779	365670	None	None
HERV3_Xq21.31	HERV	HERV3	oneside	chrX	89579057	89587397	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TGIF2LX	ENSG00000153779	334511	AL121872.1	ENSG00000225012	132074	None	None
MER4B_Xq21.31a	HERV	MER4B	oneside	chrX	89751649	89753656	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TGIF2LX	ENSG00000153779	168252	AL121872.1	ENSG00000225012	304666	None	None
HUERSP3_Xq21.31	HERV	HUERSP3	prototype	chrX	89757074	89763097	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TGIF2LX	ENSG00000153779	158811	AL121872.1	ENSG00000225012	310091	None	chrX:89757356-89757364
ERVLB4_Xq21.31g	HERV	ERVLB4	internal	chrX	89777981	89779509	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121872.1	ENSG00000225012	330998	TGIF2LX	ENSG00000153779	142399	None	None
ERVLB4_Xq21.31h	HERV	ERVLB4	oneside	chrX	89801570	89803504	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TGIF2LX	ENSG00000153779	118404	AL121872.1	ENSG00000225012	354587	None	None
ERVL_Xq21.31a	HERV	ERVL	oneside	chrX	89803507	89806220	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TGIF2LX	ENSG00000153779	115688	AL121872.1	ENSG00000225012	356524	None	None
ERVL_Xq21.31b	HERV	ERVL	oneside	chrX	89900791	89902258	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121872.1	ENSG00000225012	453808	TGIF2LX	ENSG00000153779	19650	None	None
MER4_Xq21.31h	HERV	MER4	prototype	chrX	89951506	89953524	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TGIF2LX	ENSG00000153779	28623	AL121877.1	ENSG00000227581	85689	None	None
HERVFRD_Xq21.31b	HERV	HERVFRD	oneside	chrX	89974209	89978766	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TGIF2LX	ENSG00000153779	51326	AL121877.1	ENSG00000227581	60447	None	None
ERVLB4_Xq21.31i	HERV	ERVLB4	internal	chrX	89984873	89985950	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TGIF2LX	ENSG00000153779	61990	AL121877.1	ENSG00000227581	53263	None	None
ERVLB4_Xq21.31j	HERV	ERVLB4	oneside	chrX	89993171	89994188	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TGIF2LX	ENSG00000153779	70288	AL121877.1	ENSG00000227581	45025	None	None
MER4B_Xq21.31b	HERV	MER4B	oneside	chrX	90078962	90083419	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121877.1	ENSG00000227581	39128	USP12PX	ENSG00000226081	29231	None	None
MER61_Xq21.31e	HERV	MER61	prototype	chrX	90083420	90089317	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	USP12PX	ENSG00000226081	23333	AL121877.1	ENSG00000227581	43586	None	None
MER4B_Xq21.31c	HERV	MER4B	oneside	chrX	90089318	90093340	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121877.1	ENSG00000227581	49484	USP12PX	ENSG00000226081	19310	None	None
ERVL_Xq21.31c	HERV	ERVL	prototype	chrX	90202353	90205748	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121873.1	ENSG00000274022	3147	USP12PX	ENSG00000226081	88647	None	None
LTR46_Xq21.31	HERV	LTR46	prototype	chrX	90215623	90223708	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2V1P9	ENSG00000229667	65828	RNF19BPX	ENSG00000227434	5203	None	None
HERVFRD_Xq21.31c	HERV	HERVFRD	oneside	chrX	90276683	90283365	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2V1P9	ENSG00000229667	6171	RNF19BPX	ENSG00000227434	66263	None	None
MER4_Xq21.31i	HERV	MER4	oneside	chrX	90283424	90290646	+	noncoding	UBE2V1P9	processed_pseudogene	ANTISENSE	ENSG00000229667	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4B_Xq21.31d	HERV	MER4B	prototype	chrX	90296561	90304850	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-555P	ENSG00000207515	292385	UBE2V1P9	ENSG00000229667	6658	None	None
ERVLB4_Xq21.31k	HERV	ERVLB4	prototype	chrX	90378077	90382023	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-555P	ENSG00000207515	215212	UBE2V1P9	ENSG00000229667	88174	None	None
ERVLE_Xq21.31d	HERV	ERVLE	internal	chrX	90399288	90400065	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-555P	ENSG00000207515	197170	UBE2V1P9	ENSG00000229667	109385	None	None
MER4_Xq21.31j	HERV	MER4	oneside	chrX	90420054	90422116	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-555P	ENSG00000207515	175119	UBE2V1P9	ENSG00000229667	130151	None	None
MER4_Xq21.31k	HERV	MER4	oneside	chrX	90428908	90432711	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-555P	ENSG00000207515	164524	UBE2V1P9	ENSG00000229667	139005	None	None
HERVFRD_Xq21.31d	HERV	HERVFRD	prototype	chrX	90432713	90439507	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-555P	ENSG00000207515	157728	UBE2V1P9	ENSG00000229667	142810	None	None
ERVLB4_Xq21.31l	HERV	ERVLB4	oneside	chrX	90478285	90480762	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-555P	ENSG00000207515	116473	UBE2V1P9	ENSG00000229667	188382	None	None
ERVL_Xq21.31d	HERV	ERVL	oneside	chrX	90486774	90490448	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-555P	ENSG00000207515	106787	UBE2V1P9	ENSG00000229667	196871	None	None
MER4_Xq21.31l	HERV	MER4	oneside	chrX	90522781	90524310	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2V1P9	ENSG00000229667	232878	RNU6-555P	ENSG00000207515	72925	None	None
MER4_Xq21.31m	HERV	MER4	oneside	chrX	90524331	90530376	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2V1P9	ENSG00000229667	234428	RNU6-555P	ENSG00000207515	66859	None	None
MER41_Xq21.31a	HERV	MER41	internal	chrX	90566623	90567312	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-555P	ENSG00000207515	29923	UBE2V1P9	ENSG00000229667	276720	None	None
MER41_Xq21.31b	HERV	MER41	internal	chrX	90567362	90571568	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-555P	ENSG00000207515	25667	UBE2V1P9	ENSG00000229667	277459	None	None
HERVFRD_Xq21.31e	HERV	HERVFRD	oneside	chrX	90574906	90576903	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-555P	ENSG00000207515	20332	UBE2V1P9	ENSG00000229667	285003	None	None
HERVL_Xq21.31h	HERV	HERVL	prototype	chrX	90630590	90633551	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-555P	ENSG00000207515	33250	AL121823.1	ENSG00000206062	674230	None	None
HERVL_Xq21.31i	HERV	HERVL	prototype	chrX	90694058	90699707	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121823.1	ENSG00000206062	608074	RNU6-555P	ENSG00000207515	96718	None	None
HERVH_Xq21.31b	HERV	HERVH	prototype	chrX	90773313	90779155	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121823.1	ENSG00000206062	528626	RNU6-555P	ENSG00000207515	175973	None	None
MER4_Xq21.31n	HERV	MER4	prototype	chrX	90943857	90948349	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-555P	ENSG00000207515	346517	AL121823.1	ENSG00000206062	359432	None	None
MER4B_Xq21.31e	HERV	MER4B	oneside	chrX	91000872	91005363	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-555P	ENSG00000207515	403532	AL121823.1	ENSG00000206062	302418	None	None
MER4_Xq21.31o	HERV	MER4	oneside	chrX	91005364	91006901	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121823.1	ENSG00000206062	300880	RNU6-555P	ENSG00000207515	408024	None	None
HERVL_Xq21.31j	HERV	HERVL	prototype	chrX	91058847	91065210	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-555P	ENSG00000207515	461507	AL121823.1	ENSG00000206062	242571	None	None
HERVFRD_Xq21.31f	HERV	HERVFRD	prototype	chrX	91122923	91124949	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-555P	ENSG00000207515	525583	AL121823.1	ENSG00000206062	182832	None	None
ERVL_Xq21.31e	HERV	ERVL	oneside	chrX	91257434	91258898	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-555P	ENSG00000207515	660094	AL121823.1	ENSG00000206062	48883	None	None
HERVL40_Xq21.31	HERV	HERVL40	internal	chrX	91272857	91274915	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121823.1	ENSG00000206062	32866	RNU6-555P	ENSG00000207515	675517	None	None
ERV316A3_Xq21.31c	HERV	ERV316A3	internal	chrX	91274984	91276234	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-555P	ENSG00000207515	677644	AL121823.1	ENSG00000206062	31547	None	None
HUERSP3B_Xq21.31	HERV	HUERSP3B	internal	chrX	91277278	91278621	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121823.1	ENSG00000206062	29160	RNU6-555P	ENSG00000207515	679938	None	None
LTR25_Xq21.31	HERV	LTR25	internal	chrX	91278622	91280203	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121823.1	ENSG00000206062	27578	RNU6-555P	ENSG00000207515	681282	None	None
HERVL_Xq21.31k	HERV	HERVL	oneside	chrX	91346322	91349257	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121823.1	ENSG00000206062	37444	PABPC5-AS1	ENSG00000234161	65621	None	None
MER4_Xq21.31p	HERV	MER4	internal	chrX	91356294	91358198	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PABPC5-AS1	ENSG00000234161	56680	AL121823.1	ENSG00000206062	47416	None	None
MER4_Xq21.31q	HERV	MER4	oneside	chrX	91361149	91363125	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PABPC5-AS1	ENSG00000234161	51753	AL121823.1	ENSG00000206062	52271	None	None
ERVLB4_Xq21.31m	HERV	ERVLB4	oneside	chrX	91379339	91380789	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121823.1	ENSG00000206062	70461	PABPC5-AS1	ENSG00000234161	34089	None	None
MER4B_Xq21.31f	HERV	MER4B	oneside	chrX	91641322	91643567	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERBP1P4	ENSG00000230275	79725	PCDH11X	ENSG00000102290	135694	None	None
HERVL_Xq21.31l	HERV	HERVL	oneside	chrX	91899027	91900600	-	noncoding	PCDH11X	protein_coding	ANTISENSE	ENSG00000102290	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xq21.31c	HERV	HERVH	prototype	chrX	92100240	92105917	-	noncoding	PCDH11X	protein_coding	ANTISENSE	ENSG00000102290	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chrX:92104701-92104714,chrX:92104755-92104758
HERVH_Xq21.31d	HERV	HERVH	prototype	chrX	92273083	92278794	-	noncoding	PCDH11X	protein_coding	ANTISENSE	ENSG00000102290	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV4_Xq21.31b	HERV	HERV4	internal	chrX	92692207	92693880	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUSC2P2	ENSG00000285445	76975	AL121871.1	ENSG00000225912	15253	None	None
HERVL_Xq21.32a	HERV	HERVL	prototype	chrX	92727373	92733887	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121871.1	ENSG00000225912	50419	TUSC2P2	ENSG00000285445	36968	None	None
HERVH_Xq21.32a	HERV	HERVH	prototype	chrX	92824428	92829345	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUSC2P2	ENSG00000285445	52337	AL158053.1	ENSG00000237873	213145	None	None
HERVH_Xq21.32b	HERV	HERVH	prototype	chrX	93022959	93028634	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUSC2P2	ENSG00000285445	250868	AL158053.1	ENSG00000237873	13856	None	None
LTR19_Xq21.32	HERV	LTR19	internal	chrX	93178505	93179323	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158053.1	ENSG00000237873	135563	AL359263.1	ENSG00000234130	42897	None	None
HERVEA_Xq21.32	HERV	HERVEA	oneside	chrX	93236879	93239646	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359263.1	ENSG00000234130	11864	ST13P18	ENSG00000234322	48087	None	None
ERVLB4_Xq21.32	HERV	ERVLB4	oneside	chrX	93254222	93256312	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ST13P18	ENSG00000234322	31421	AL359263.1	ENSG00000234130	29207	None	None
ERVLE_Xq21.32a	HERV	ERVLE	internal	chrX	93263091	93264034	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ST13P18	ENSG00000234322	23699	AL359263.1	ENSG00000234130	38076	None	None
HERVFRD_Xq21.32a	HERV	HERVFRD	prototype	chrX	93418212	93421536	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P55	ENSG00000228301	152298	AL023280.1	ENSG00000237381	28715	None	None
HERVE_Xq21.32	HERV	HERVE	prototype	chrX	93429668	93438491	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL023280.1	ENSG00000237381	40171	RPL7P55	ENSG00000228301	135343	None	None
MER61_Xq21.32	HERV	MER61	oneside	chrX	93457873	93462489	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P55	ENSG00000228301	111345	AL023280.1	ENSG00000237381	68376	None	None
PABLA_Xq21.32	HERV	PABLA	internal	chrX	93566201	93567593	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P55	ENSG00000228301	6241	AL023280.1	ENSG00000237381	176704	None	None
MER4B_Xq21.32	HERV	MER4B	internal	chrX	93569925	93571530	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P55	ENSG00000228301	2304	AL023280.1	ENSG00000237381	180428	None	None
MER4_Xq21.32a	HERV	MER4	oneside	chrX	93571549	93573073	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P55	ENSG00000228301	761	AL023280.1	ENSG00000237381	182052	None	None
HERVFRD_Xq21.32b	HERV	HERVFRD	oneside	chrX	93579990	93582140	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NAP1L3	ENSG00000186310	88790	RPL7P55	ENSG00000228301	5411	None	None
ERVLE_Xq21.32b	HERV	ERVLE	internal	chrX	93716637	93722118	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z94722.1	ENSG00000270826	54793	FAM133A	ENSG00000179083	4363	None	None
LTR25_Xq21.32	HERV	LTR25	prototype	chrX	93868316	93876245	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-332P	ENSG00000212495	127570	Z94722.1	ENSG00000270826	90932	None	None
HERVL_Xq21.32b	HERV	HERVL	prototype	chrX	93957315	93963891	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z94722.1	ENSG00000270826	179931	RNU6-332P	ENSG00000212495	39924	None	None
HUERSP1_Xq21.32	HERV	HUERSP1	oneside	chrX	94005286	94008420	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL022149.1	ENSG00000202410	169585	RNU6-332P	ENSG00000212495	1364	None	None
PABLB_Xq21.32a	HERV	PABLB	oneside	chrX	94009212	94015552	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL022149.1	ENSG00000202410	162453	RNU6-332P	ENSG00000212495	5290	None	chrX:94015551-94015555
PABLB_Xq21.32b	HERV	PABLB	oneside	chrX	94015589	94017580	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL022149.1	ENSG00000202410	160425	RNU6-332P	ENSG00000212495	11667	None	None
MER4_Xq21.32b	HERV	MER4	oneside	chrX	94043769	94045449	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL022149.1	ENSG00000202410	132556	RNU6-332P	ENSG00000212495	39847	None	None
MER4_Xq21.32c	HERV	MER4	opposite*	chrX	94045452	94050941	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL022149.1	ENSG00000202410	127064	RNU6-332P	ENSG00000212495	41530	None	None
HERVL_Xq21.32c	HERV	HERVL	internal	chrX	94079616	94080486	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL022149.1	ENSG00000202410	97519	RNU6-332P	ENSG00000212495	75694	None	None
ERV316A3_Xq21.32	HERV	ERV316A3	oneside	chrX	94094367	94096099	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL022149.1	ENSG00000202410	81906	RNU6-332P	ENSG00000212495	90445	None	None
HERVL_Xq21.32d	HERV	HERVL	internal	chrX	94118430	94119415	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-332P	ENSG00000212495	114508	AL022149.1	ENSG00000202410	58590	None	None
ERVLB4_Xq21.33a	HERV	ERVLB4	internal	chrX	94347768	94349093	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390840.1	ENSG00000227521	27743	PAICSP7	ENSG00000232293	287570	None	None
ERVLB4_Xq21.33b	HERV	ERVLB4	internal	chrX	94413885	94416118	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PAICSP7	ENSG00000232293	220545	AL390840.1	ENSG00000227521	93860	None	None
HUERSP3B_Xq21.33	HERV	HUERSP3B	prototype	chrX	94439682	94442849	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PAICSP7	ENSG00000232293	193814	AL390840.1	ENSG00000227521	119657	None	None
ERVLB4_Xq21.33c	HERV	ERVLB4	prototype	chrX	94445090	94449049	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390840.1	ENSG00000227521	125065	PAICSP7	ENSG00000232293	187614	None	None
HERVL_Xq21.33a	HERV	HERVL	internal	chrX	94477520	94479239	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390840.1	ENSG00000227521	157495	PAICSP7	ENSG00000232293	157424	None	None
MER4_Xq21.33a	HERV	MER4	oneside	chrX	94479770	94481127	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390840.1	ENSG00000227521	159745	PAICSP7	ENSG00000232293	155536	chrX:94480945-94481140	None
MER4_Xq21.33b	HERV	MER4	oneside	chrX	94486483	94490327	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390840.1	ENSG00000227521	166458	PAICSP7	ENSG00000232293	146336	None	None
HML5_Xq21.33	HERV	HML5	prototype	chrX	94491677	94498448	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390840.1	ENSG00000227521	171652	PAICSP7	ENSG00000232293	138215	None	None
HERVL_Xq21.33b	HERV	HERVL	prototype	chrX	94553917	94556191	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390840.1	ENSG00000227521	233892	PAICSP7	ENSG00000232293	80472	None	None
MER4_Xq21.33c	HERV	MER4	oneside	chrX	94569701	94572846	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PAICSP7	ENSG00000232293	63817	AL390840.1	ENSG00000227521	249676	None	None
HERVFRD_Xq21.33a	HERV	HERVFRD	oneside	chrX	94653702	94655688	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PAICSP7	ENSG00000232293	14132	CCNB1IP1P3	ENSG00000231001	121051	None	None
MER4B_Xq21.33	HERV	MER4B	prototype	chrX	94683482	94693066	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCNB1IP1P3	ENSG00000231001	83673	PAICSP7	ENSG00000232293	43912	None	None
MER4_Xq21.33d	HERV	MER4	unknown	chrX	94696225	94698819	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PAICSP7	ENSG00000232293	56655	CCNB1IP1P3	ENSG00000231001	77920	None	None
HERVH_Xq21.33a	HERV	HERVH	prototype	chrX	94698820	94705089	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCNB1IP1P3	ENSG00000231001	71650	PAICSP7	ENSG00000232293	59250	None	None
HERVL_Xq21.33c	HERV	HERVL	oneside	chrX	94819231	94825365	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548M	ENSG00000221187	237776	CCNB1IP1P3	ENSG00000231001	41664	None	None
ERVLB4_Xq21.33d	HERV	ERVLB4	prototype	chrX	94890069	94892405	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548M	ENSG00000221187	170736	CCNB1IP1P3	ENSG00000231001	112502	None	None
HERVL_Xq21.33d	HERV	HERVL	prototype	chrX	94915570	94923052	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCNB1IP1P3	ENSG00000231001	138003	MIR548M	ENSG00000221187	140089	None	None
HERVFRD_Xq21.33b	HERV	HERVFRD	internal	chrX	94965188	94967813	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCNB1IP1P3	ENSG00000231001	187621	MIR548M	ENSG00000221187	95328	None	None
HUERSP3_Xq21.33	HERV	HUERSP3	prototype	chrX	95074129	95079880	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL022161.1	ENSG00000271094	373489	MIR548M	ENSG00000221187	10903	None	None
MER4_Xq21.33e	HERV	MER4	oneside	chrX	95083159	95084805	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL022161.1	ENSG00000271094	368564	MIR548M	ENSG00000221187	19933	None	None
HML3_Xq21.33a	HERV	HML3	oneside	chrX	95103649	95107926	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL022161.1	ENSG00000271094	345443	MIR548M	ENSG00000221187	40423	None	None
HML3_Xq21.33b	HERV	HML3	oneside	chrX	95107996	95109260	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL022161.1	ENSG00000271094	344109	MIR548M	ENSG00000221187	44770	None	None
ERVL_Xq21.33a	HERV	ERVL	oneside	chrX	95140887	95143162	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL022161.1	ENSG00000271094	310207	MIR548M	ENSG00000221187	77661	None	None
ERVLB4_Xq21.33e	HERV	ERVLB4	prototype	chrX	95549905	95552927	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP510	ENSG00000201567	29137	CALM1P1	ENSG00000223467	49869	None	None
MER41_Xq21.33a	HERV	MER41	internal	chrX	95627338	95629750	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPDLP3	ENSG00000236185	16381	HNRNPDLP1	ENSG00000226307	8625	None	None
HERVL_Xq21.33e	HERV	HERVL	prototype	chrX	95713089	95715949	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS7P13	ENSG00000235425	33462	AL365400.2	ENSG00000270583	4294	None	None
HERVL_Xq21.33f	HERV	HERVL	prototype	chrX	95959032	95965914	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137845.2	ENSG00000232842	7414	AL365400.2	ENSG00000270583	237888	None	None
ERVL_Xq21.33b	HERV	ERVL	prototype	chrX	96231430	96235993	+	noncoding	AL022151.1	lncRNA	ANTISENSE	ENSG00000286523	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xq21.33f	HERV	ERVLB4	prototype	chrX	96496913	96501147	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP194	ENSG00000223260	86131	AL606530.1	ENSG00000229693	119507	None	None
HERVH_Xq21.33b	HERV	HERVH	prototype	chrX	96624025	96630448	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL606530.1	ENSG00000229693	2122	DIAPH2	ENSG00000147202	54215	None	None
HERVFC2_Xq21.33	HERV	HERVFC2	prototype	chrX	97841482	97849424	+	coding	AL354685.1	processed_pseudogene	SENSE	ENSG00000233887	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xq21.33c	HERV	HERVH	oneside	chrX	98287858	98289247	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL6P29	ENSG00000236243	35315	AL357312.1	ENSG00000271322	59204	None	None
MER61_Xq21.33	HERV	MER61	prototype	chrX	98374832	98380913	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EEF1A1P15	ENSG00000213704	8599	AL357312.1	ENSG00000271322	26084	None	None
ERV316A3_Xq21.33a	HERV	ERV316A3	internal	chrX	98398194	98402055	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB1P32	ENSG00000226837	20083	EEF1A1P15	ENSG00000213704	7275	None	None
ERVLE_Xq21.33	HERV	ERVLE	internal	chrX	98405243	98408324	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EEF1A1P15	ENSG00000213704	14324	HMGB1P32	ENSG00000226837	13814	None	None
HERVH_Xq21.33d	HERV	HERVH	prototype	chrX	98524246	98530070	-	noncoding	AL157778.1	lncRNA	ANTISENSE	ENSG00000281566	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_Xq21.33c	HERV	HERVFRD	internal	chrX	98575216	98577970	-	noncoding	AL157778.1	lncRNA	ANTISENSE	ENSG00000281566	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xq21.33b	HERV	ERV316A3	internal	chrX	98638198	98638905	+	noncoding	AL157778.1	lncRNA	SENSE	ENSG00000281566	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xq21.33g	HERV	HERVL	prototype	chrX	98655061	98661588	+	noncoding	AL157778.1	lncRNA	SENSE	ENSG00000281566	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xq21.33h	HERV	HERVL	prototype	chrX	98849425	98855201	-	noncoding	AL157778.1	lncRNA	ANTISENSE	ENSG00000281566	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_Xq21.33d	HERV	HERVFRD	oneside	chrX	98855509	98858688	+	noncoding	AL157778.1	lncRNA	SENSE	ENSG00000281566	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_Xq21.33b	HERV	MER41	internal	chrX	98860384	98864928	+	noncoding	AL157778.1	lncRNA	SENSE	ENSG00000281566	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL40_Xq21.33	HERV	HERVL40	oneside	chrX	99096841	99103259	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137843.1	ENSG00000270308	553738	AL157778.1	ENSG00000281566	204780	None	None
ERVLB4_Xq22.1a	HERV	ERVLB4	prototype	chrX	99124852	99130756	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL157778.1	ENSG00000281566	232791	AL137843.1	ENSG00000270308	526241	None	None
HERVH_Xq22.1a	HERV	HERVH	prototype	chrX	99158722	99165186	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137843.1	ENSG00000270308	491811	AL157778.1	ENSG00000281566	266661	None	None
MER4_Xq22.1a	HERV	MER4	oneside	chrX	99321691	99329930	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL157778.1	ENSG00000281566	429630	AL137843.1	ENSG00000270308	327067	None	None
ERVLB4_Xq22.1b	HERV	ERVLB4	internal	chrX	99419396	99420238	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137843.1	ENSG00000270308	236759	AL157778.1	ENSG00000281566	527335	None	None
ERVLB4_Xq22.1c	HERV	ERVLB4	internal	chrX	99435183	99436633	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137843.1	ENSG00000270308	220364	AL157778.1	ENSG00000281566	543122	None	None
MER4_Xq22.1b	HERV	MER4	internal	chrX	99570612	99573342	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137843.1	ENSG00000270308	83655	AL157778.1	ENSG00000281566	678551	None	None
MER4_Xq22.1c	HERV	MER4	internal	chrX	99573598	99574928	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137843.1	ENSG00000270308	82069	AL157778.1	ENSG00000281566	681537	None	None
ERV316A3_Xq22.1a	HERV	ERV316A3	prototype	chrX	99997504	99999594	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359641.2	ENSG00000252296	100490	B3GNT2P1	ENSG00000229946	109813	None	None
HERVP71A_Xq22.1a	HERV	HERVP71A	oneside	chrX	100567828	100570508	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TNMD	ENSG00000000005	14428	PCDH19	ENSG00000165194	157555	None	None
HERVP71A_Xq22.1b	HERV	HERVP71A	internal	chrX	100570590	100575762	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TNMD	ENSG00000000005	9174	PCDH19	ENSG00000165194	160317	None	None
HERVP71A_Xq22.1c	HERV	HERVP71A	oneside	chrX	100575947	100577246	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TNMD	ENSG00000000005	7690	PCDH19	ENSG00000165194	165674	None	None
ERVLB4_Xq22.1d	HERV	ERVLB4	internal	chrX	100754668	100756942	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP89	ENSG00000223819	43361	SYTL4	ENSG00000102362	22545	None	None
ERVLB4_Xq22.1e	HERV	ERVLB4	oneside	chrX	100761449	100763731	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP89	ENSG00000223819	36572	SYTL4	ENSG00000102362	29326	None	None
HERVH_Xq22.1b	HERV	HERVH	prototype	chrX	100786618	100791864	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP89	ENSG00000223819	8439	SYTL4	ENSG00000102362	54495	None	None
PRIMA4_Xq22.1	HERV	PRIMA4	oneside	chrX	100791865	100799758	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SYTL4	ENSG00000102362	59742	PPIAP89	ENSG00000223819	545	None	None
HUERSP1_Xq22.1	HERV	HUERSP1	oneside	chrX	101070965	101076508	+	noncoding	TRMT2B-AS1	lncRNA	ANTISENSE	ENSG00000225839	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_Xq22.1	HERV	HML1	prototype	chrX	101183246	101189871	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z70280.1	ENSG00000231643	1244	CENPI	ENSG00000102384	19565	None	None
ERVLB4_Xq22.1f	HERV	ERVLB4	oneside	chrX	101512701	101515967	-	noncoding	ARMCX4	protein_coding	ANTISENSE	ENSG00000196440	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_Xq22.1a	HERV	ERVLE	internal	chrX	101531661	101532640	+	noncoding	ARMCX4	protein_coding	SENSE	ENSG00000196440	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
PABLB_Xq22.1	HERV	PABLB	internal	chrX	101860161	101863376	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NXF5	ENSG00000126952	2584	ZMAT1	ENSG00000166432	18912	None	None
ERV316A3_Xq22.1b	HERV	ERV316A3	internal	chrX	101937954	101939885	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZMAT1	ENSG00000166432	5875	H2BP8	ENSG00000235976	49596	None	None
ERV316A3_Xq22.1c	HERV	ERV316A3	internal	chrX	101942522	101943263	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZMAT1	ENSG00000166432	10443	H2BP8	ENSG00000235976	46218	None	None
MER4_Xq22.1d	HERV	MER4	prototype	chrX	102060351	102067080	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTND6P13	ENSG00000234901	51305	TCEAL2	ENSG00000184905	58599	None	None
ERVLB4_Xq22.1g	HERV	ERVLB4	internal	chrX	102093536	102094400	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TCEAL2	ENSG00000184905	31279	MTND6P13	ENSG00000234901	84490	None	None
ERVLE_Xq22.1b	HERV	ERVLE	internal	chrX	102131723	102132335	+	noncoding	TCEAL2	protein_coding	SENSE	ENSG00000184905	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xq22.1	HERV	HERVL	internal	chrX	102132421	102133108	+	noncoding	TCEAL2	protein_coding	SENSE	ENSG00000184905	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_Xq22.1c	HERV	ERVLE	internal	chrX	102136815	102137664	-	noncoding	TCEAL2	protein_coding	ANTISENSE	ENSG00000184905	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_Xq22.1	HERV	HML5	prototype	chrX	102175186	102181644	-	noncoding	TCP11X3P	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000251525	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_Xq22.1	HERV	HUERSP3B	internal	chrX	102732151	102737494	-	coding	ARMCX5-GPRASP2,BHLHB9	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000286237,ENSG00000198908	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_Xq22.1	HERV	HERVFRD	unknown	chrX	102738078	102742763	-	noncoding	ARMCX5-GPRASP2,BHLHB9	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000286237,ENSG00000198908	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Xq22.1e	HERV	MER4	oneside	chrX	102788400	102791425	-	noncoding	LINC00630	lncRNA	ANTISENSE	ENSG00000223546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xq22.1h	HERV	ERVLB4	internal	chrX	102821848	102822901	+	noncoding	LINC00630	lncRNA	SENSE	ENSG00000223546	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_Xq22.1d	HERV	ERVLE	internal	chrX	102996654	102997391	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z93943.1	ENSG00000286846	44615	Z73361.1	ENSG00000224632	10070	None	None
MER4_Xq22.1f	HERV	MER4	internal	chrX	103011219	103012118	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BEX1	ENSG00000133169	50533	Z73361.1	ENSG00000224632	3147	None	None
LTR23_Xq22.1	HERV	LTR23	internal	chrX	103100152	103101195	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP59	ENSG00000233071	104815	NXF3	ENSG00000147206	7009	None	None
ERVLB4_Xq22.1i	HERV	ERVLB4	internal	chrX	103149529	103150268	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NXF3	ENSG00000147206	56386	RPSAP59	ENSG00000233071	55742	None	None
HERVL74_Xq22.1a	HERV	HERVL74	oneside	chrX	103281544	103282494	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BEX2	ENSG00000133134	26852	TCEAL5	ENSG00000204065	4794	None	None
HERVL74_Xq22.1b	HERV	HERVL74	internal	chrX	103291320	103294936	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BEX2	ENSG00000133134	14410	TCEAL5	ENSG00000204065	14570	None	None
HERVH_Xq22.2a	HERV	HERVH	prototype	chrX	103429055	103435438	-	noncoding	AL117327.1	lncRNA	ANTISENSE	ENSG00000281091	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xq22.2b	HERV	HERVH	oneside	chrX	103761159	103762899	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PLP1	ENSG00000123560	10819	GLRA4	ENSG00000188828	32504	None	None
HERVH_Xq22.2c	HERV	HERVH	oneside	chrX	103763061	103767306	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PLP1	ENSG00000123560	6412	GLRA4	ENSG00000188828	34406	chrX:103763217-103763524,chrX:103764894-103765076	chrX:103764894-103764897,chrX:103766942-103766974,chrX:103767015-103767045
HERVL40_Xq22.2	HERV	HERVL40	prototype	chrX	103857699	103863417	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP511	ENSG00000222419	6788	TMSB15B-AS1	ENSG00000231728	17251	None	None
LTR25_Xq22.2a	HERV	LTR25	oneside	chrX	103864676	103867698	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMSB15B-AS1	ENSG00000231728	12970	RNA5SP511	ENSG00000222419	13765	chrX:103865104-103865284	None
LTR25_Xq22.2b	HERV	LTR25	oneside	chrX	103873422	103879991	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMSB15B-AS1	ENSG00000231728	677	RNA5SP511	ENSG00000222419	22511	None	None
ERVLE_Xq22.3a	HERV	ERVLE	internal	chrX	104532865	104534478	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IL1RAPL2	ENSG00000189108	31721	ESX1	ENSG00000123576	277932	None	None
HERVL_Xq22.3a	HERV	HERVL	prototype	chrX	104864519	104866006	+	noncoding	IL1RAPL2	protein_coding	SENSE	ENSG00000189108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_Xq22.3a	HERV	HERV9	internal	chrX	104888418	104889804	+	noncoding	IL1RAPL2	protein_coding	SENSE	ENSG00000189108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Xq22.3a	HERV	MER4	prototype	chrX	105420961	105424535	-	noncoding	IL1RAPL2	protein_coding	ANTISENSE	ENSG00000189108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11D_Xq22.3	HERV	HERVK11D	oneside	chrX	105666189	105669044	-	noncoding	IL1RAPL2	protein_coding	ANTISENSE	ENSG00000189108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_Xq22.3a	HERV	HERVW	oneside	chrX	106000793	106004122	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NRK	ENSG00000123572	42183	SERPINA7	ENSG00000123561	28313	None	None
ERV316A3_Xq22.3a	HERV	ERV316A3	oneside	chrX	106028343	106030047	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NRK	ENSG00000123572	69733	SERPINA7	ENSG00000123561	2388	None	None
ERVLE_Xq22.3b	HERV	ERVLE	internal	chrX	106040678	106041674	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512661.1	ENSG00000230788	28807	SERPINA7	ENSG00000123561	1951	None	None
ERVLE_Xq22.3c	HERV	ERVLE	internal	chrX	106041796	106043506	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERPINA7	ENSG00000123561	3069	AL512661.1	ENSG00000230788	26975	None	None
PRIMA4_Xq22.3	HERV	PRIMA4	internal	chrX	106047640	106049159	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERPINA7	ENSG00000123561	8913	AL512661.1	ENSG00000230788	21322	None	None
MER4_Xq22.3b	HERV	MER4	oneside	chrX	106053992	106055490	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERPINA7	ENSG00000123561	15265	AL512661.1	ENSG00000230788	14991	None	None
MER4B_Xq22.3a	HERV	MER4B	internal	chrX	106055544	106056632	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERPINA7	ENSG00000123561	16817	AL512661.1	ENSG00000230788	13849	None	None
ERVLE_Xq22.3d	HERV	ERVLE	oneside	chrX	106102489	106104987	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512661.1	ENSG00000230788	29287	PWWP3B	ENSG00000157502	63318	None	None
ERVLE_Xq22.3e	HERV	ERVLE	internal	chrX	106115323	106116737	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PWWP3B	ENSG00000157502	51568	AL512661.1	ENSG00000230788	42121	None	None
MER4B_Xq22.3b	HERV	MER4B	oneside	chrX	106116761	106121348	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PWWP3B	ENSG00000157502	46957	AL512661.1	ENSG00000230788	43559	None	None
LTR57_Xq22.3	HERV	LTR57	internal	chrX	106121349	106121887	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PWWP3B	ENSG00000157502	46418	AL512661.1	ENSG00000230788	48147	None	None
MER4B_Xq22.3c	HERV	MER4B	unknown	chrX	106121888	106124194	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PWWP3B	ENSG00000157502	44111	AL512661.1	ENSG00000230788	48686	None	None
HERV9_Xq22.3b	HERV	HERV9	prototype	chrX	106181088	106187060	-	noncoding	PWWP3B	protein_coding	ANTISENSE	ENSG00000157502	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xq22.3b	HERV	ERV316A3	oneside	chrX	106213331	106215320	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PWWP3B	ENSG00000157502	4375	AL133271.1	ENSG00000256709	112214	None	None
ERVLE_Xq22.3f	HERV	ERVLE	internal	chrX	106213899	106214608	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PWWP3B	ENSG00000157502	4943	AL133271.1	ENSG00000256709	112926	None	None
ERVLB4_Xq22.3	HERV	ERVLB4	oneside	chrX	106227045	106228639	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133271.1	ENSG00000256709	98895	PWWP3B	ENSG00000157502	18089	None	None
MER4B_Xq22.3d	HERV	MER4B	internal	chrX	106266291	106267377	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PWWP3B	ENSG00000157502	57335	AL133271.1	ENSG00000256709	60157	None	None
HERVL74_Xq22.3	HERV	HERVL74	oneside	chrX	106331458	106335977	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL139812.1	ENSG00000202407	90591	AL133271.1	ENSG00000256709	3634	None	None
MER4B_Xq22.3e	HERV	MER4B	prototype	chrX	106336209	106346170	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL139812.1	ENSG00000202407	80398	AL133271.1	ENSG00000256709	8385	None	None
HERVL40_Xq22.3	HERV	HERVL40	internal	chrX	106479692	106482512	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERPINA7P1	ENSG00000227657	80262	NAP1L4P2	ENSG00000224816	12252	None	None
MER4_Xq22.3c	HERV	MER4	prototype	chrX	106502502	106509359	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NAP1L4P2	ENSG00000224816	35062	SERPINA7P1	ENSG00000227657	53415	None	chrX:106503148-106503153
HERVW_Xq22.3b	HERV	HERVW	oneside	chrX	106551265	106553257	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NAP1L4P2	ENSG00000224816	83825	SERPINA7P1	ENSG00000227657	9517	None	None
ERVLE_Xq22.3g	HERV	ERVLE	internal	chrX	106584809	106585694	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RADX	ENSG00000147231	26236	AL590808.1	ENSG00000277673	18648	None	None
ERVLE_Xq22.3h	HERV	ERVLE	internal	chrX	106585744	106586506	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590808.1	ENSG00000277673	19583	RADX	ENSG00000147231	25424	None	None
ERVLE_Xq22.3i	HERV	ERVLE	internal	chrX	106878282	106882375	-	noncoding	MORC4	protein_coding	SENSE	ENSG00000133131	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xq22.3c	HERV	ERV316A3	oneside	chrX	107003404	107005335	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MORC4	ENSG00000133131	3192	EEF1A1P40	ENSG00000231144	26913	None	None
ERV316A3_Xq22.3d	HERV	ERV316A3	oneside	chrX	107011710	107013313	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MORC4	ENSG00000133131	11498	EEF1A1P40	ENSG00000231144	18935	None	None
HERVW_Xq22.3c	HERV	HERVW	oneside	chrX	107052131	107054871	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBM41	ENSG00000089682	9549	EEF1A1P40	ENSG00000231144	19311	None	None
MER41_Xq22.3	HERV	MER41	oneside	chrX	107278460	107280372	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DNAJA1P3	ENSG00000215007	71278	MYCLP1	ENSG00000204053	4804	None	None
HERVL_Xq22.3b	HERV	HERVL	prototype	chrX	108142407	108148448	-	coding	ATG4A	protein_coding	ANTISENSE	ENSG00000101844	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xq22.3c	HERV	HERVL	prototype	chrX	108476940	108483623	-	coding	COL4A5	protein_coding	ANTISENSE	ENSG00000188153	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xq22.3d	HERV	HERVL	oneside	chrX	108814062	108818872	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-309P	ENSG00000201443	7892	AL035425.2	ENSG00000237863	74839	None	None
HERVH_Xq22.3	HERV	HERVH	prototype	chrX	109178345	109184158	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL928646.1	ENSG00000275110	123755	AL034403.1	ENSG00000215000	157655	None	None
HERVIP10FH_Xq22.3	HERV	HERVIP10FH	prototype	chrX	109235983	109242363	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL034403.1	ENSG00000215000	99450	AL928646.1	ENSG00000275110	181393	None	None
ERVLE_Xq23a	HERV	ERVLE	oneside	chrX	109494552	109495744	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NXT2	ENSG00000101888	40037	GUCY2F	ENSG00000101890	12466	None	None
ERVLE_Xq23b	HERV	ERVLE	internal	chrX	109498958	109499733	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NXT2	ENSG00000101888	36048	GUCY2F	ENSG00000101890	16872	None	None
ERVLB4_Xq23a	HERV	ERVLB4	internal	chrX	109503269	109505193	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NXT2	ENSG00000101888	30588	GUCY2F	ENSG00000101890	21183	chrX:109503384-109503602	None
MER41_Xq23a	HERV	MER41	prototype	chrX	109550904	109555972	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NXT2	ENSG00000101888	6214	AL118496.1	ENSG00000233874	12506	None	None
HERVH_Xq23a	HERV	HERVH	prototype	chrX	109866074	109870862	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM164	ENSG00000157600	131769	RPS5P7	ENSG00000225381	12155	None	None
ERV316A3_Xq23a	HERV	ERV316A3	internal	chrX	110595050	110596164	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC000113.1	ENSG00000287685	70730	AL512882.1	ENSG00000228042	40677	None	None
ERVLE_Xq23c	HERV	ERVLE	internal	chrX	111417311	111418617	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DCX	ENSG00000077279	4882	RNU6-496P	ENSG00000251954	2893	None	None
HERVH_Xq23b	HERV	HERVH	prototype	chrX	111543807	111549673	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERTM2	ENSG00000260802	21408	AL589880.1	ENSG00000229939	69135	None	None
PABLA_Xq23	HERV	PABLA	prototype	chrX	111555934	111561679	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589880.1	ENSG00000229939	57129	SERTM2	ENSG00000260802	33535	None	None
PRIMA4_Xq23	HERV	PRIMA4	internal	chrX	111672117	111675227	-	noncoding	ALG13	protein_coding	ANTISENSE	ENSG00000101901	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xq23b	HERV	ERV316A3	oneside	chrX	111790584	111793270	+	noncoding	TRPC5	protein_coding	ANTISENSE	ENSG00000072315	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_Xq23	HERV	LTR25	internal	chrX	111858949	111861614	-	coding	TRPC5	protein_coding	SENSE	ENSG00000072315	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xq23b	HERV	ERVLB4	prototype	chrX	111981035	111988030	-	noncoding	TRPC5	protein_coding	SENSE	ENSG00000072315	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xq23a	HERV	HERVL	oneside	chrX	112208915	112210178	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DPRXP7	ENSG00000271464	109774	TRPC5	ENSG00000072315	126139	None	None
ERV316A3_Xq23c	HERV	ERV316A3	internal	chrX	112375949	112379271	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DPRXP7	ENSG00000271464	55532	AL392112.1	ENSG00000271400	2121	None	None
MER41_Xq23b	HERV	MER41	prototype	chrX	112494759	112500274	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LHFPL1	ENSG00000182508	130374	RTL4	ENSG00000187823	37647	None	None
ERVLE_Xq23d	HERV	ERVLE	internal	chrX	112521706	112522855	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RTL4	ENSG00000187823	64594	LHFPL1	ENSG00000182508	107793	None	None
HERVH_Xq23c	HERV	HERVH	prototype	chrX	112530380	112536357	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RTL4	ENSG00000187823	73268	LHFPL1	ENSG00000182508	94291	None	None
HERVH_Xq23d	HERV	HERVH	prototype	chrX	113108718	113114424	-	noncoding	AC002072.1	lncRNA	ANTISENSE	ENSG00000286072	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xq23e	HERV	HERVH	prototype	chrX	113176131	113180558	-	noncoding	AC002072.1,AL023877.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000286072,ENSG00000286767	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xq23b	HERV	HERVL	prototype	chrX	113760400	113765460	+	noncoding	XACT	lncRNA	ANTISENSE	ENSG00000241743	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Xq23a	HERV	MER4	internal	chrX	113977809	113978786	+	noncoding	XACT	lncRNA	ANTISENSE	ENSG00000241743	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xq23f	HERV	HERVH	oneside	chrX	114040092	114045580	+	noncoding	XACT	lncRNA	ANTISENSE	ENSG00000241743	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrX:114040387-114040388
MER4B_Xq23a	HERV	MER4B	unknown	chrX	114052360	114059021	+	noncoding	XACT	lncRNA	ANTISENSE	ENSG00000241743	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrX:114057615-114057618
HERVH_Xq23g	HERV	HERVH	prototype	chrX	114466672	114472531	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SSU72P1	ENSG00000226547	75416	HTR2C	ENSG00000147246	111547	None	chrX:114467589-114467593,chrX:114467753-114467786
ERVLE_Xq23e	HERV	ERVLE	internal	chrX	114550807	114551960	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HTR2C	ENSG00000147246	32118	SSU72P1	ENSG00000226547	159551	None	None
HERVH_Xq23h	HERV	HERVH	prototype	chrX	114601272	114607242	-	noncoding	HTR2C	protein_coding	ANTISENSE	ENSG00000147246	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chrX:114606856-114606876
ERVLB4_Xq23c	HERV	ERVLB4	internal	chrX	114930139	114931443	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HTR2C	ENSG00000147246	20078	IL13RA2	ENSG00000123496	72532	None	None
HERVL_Xq23c	HERV	HERVL	prototype	chrX	114993708	114997893	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IL13RA2	ENSG00000123496	6082	HTR2C	ENSG00000147246	83647	None	None
MER41_Xq23c	HERV	MER41	oneside	chrX	114998883	115000328	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HTR2C	ENSG00000147246	88822	IL13RA2	ENSG00000123496	3647	None	None
MER4_Xq23b	HERV	MER4	prototype	chrX	115109083	115110444	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LRCH2	ENSG00000130224	172	YAP1P2	ENSG00000236080	39237	None	None
HERV9_Xq23a	HERV	HERV9	oneside	chrX	115505603	115509852	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PLS3-AS1	ENSG00000271826	8330	AC239600.1	ENSG00000271021	50409	None	None
HARLEQUIN_Xq23a	HERV	HARLEQUIN	prototype	chrX	115537733	115545656	-	noncoding	PLS3-AS1,AL589842.1	lncRNA,snoRNA	SENSE,ANTISENSE	ENSG00000271826,ENSG00000252441	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_Xq23b	HERV	HARLEQUIN	prototype	chrX	115916433	115924222	-	coding	DANT2	lncRNA	SENSE	ENSG00000235244	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chrX:115922496-115922830	None
MER101_Xq23a	HERV	MER101	internal	chrX	115927004	115928542	+	noncoding	DANT2	lncRNA	ANTISENSE	ENSG00000235244	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_Xq23b	HERV	MER101	internal	chrX	115936603	115939995	+	noncoding	DANT2	lncRNA	ANTISENSE	ENSG00000235244	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xq23i	HERV	HERVH	prototype	chrX	116010523	116014836	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL712P	ENSG00000266828	17750	AKR1B1P8	ENSG00000231371	28647	None	None
HML3_Xq23	HERV	HML3	prototype	chrX	116035253	116041455	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL712P	ENSG00000266828	42480	AKR1B1P8	ENSG00000231371	2028	None	None
ERVL_Xq23	HERV	ERVL	internal	chrX	116195556	116199051	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AGTR2	ENSG00000180772	20582	RNU6-154P	ENSG00000207033	201797	None	None
HERV9_Xq23b	HERV	HERV9	prototype	chrX	116243383	116251506	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AGTR2	ENSG00000180772	68409	RNU6-154P	ENSG00000207033	149342	None	None
PRIMA41_Xq23a	HERV	PRIMA41	prototype	chrX	116289081	116293967	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AGTR2	ENSG00000180772	114107	RNU6-154P	ENSG00000207033	106881	None	None
HERVH_Xq23j	HERV	HERVH	prototype	chrX	116332006	116336841	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AGTR2	ENSG00000180772	157032	RNU6-154P	ENSG00000207033	64007	None	None
HUERSP2_Xq23a	HERV	HUERSP2	internal	chrX	116661081	116662918	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CT83	ENSG00000204019	198105	BX119904.3	ENSG00000236077	6892	None	None
MER61_Xq23a	HERV	MER61	prototype	chrX	116662919	116667984	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX119904.3	ENSG00000236077	1826	CT83	ENSG00000204019	199943	None	None
HUERSP2_Xq23b	HERV	HUERSP2	internal	chrX	116667985	116669014	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CT83	ENSG00000204019	205009	BX119904.3	ENSG00000236077	796	None	None
HERVH_Xq23k	HERV	HERVH	prototype	chrX	116720317	116726712	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX119904.1	ENSG00000224217	21818	BX119904.2	ENSG00000230159	26129	None	None
HERVW_Xq23	HERV	HERVW	oneside	chrX	116737956	116741447	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX119904.1	ENSG00000224217	7083	BX119904.2	ENSG00000230159	43768	None	None
ERVLB4_Xq23d	HERV	ERVLB4	internal	chrX	116757340	116759031	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX119904.1	ENSG00000224217	8463	RNU6-1323P	ENSG00000206752	91808	None	None
ERVLB4_Xq23e	HERV	ERVLB4	internal	chrX	116761589	116762280	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX119904.1	ENSG00000224217	12712	RNU6-1323P	ENSG00000206752	88559	None	None
HERVH_Xq23l	HERV	HERVH	prototype	chrX	116812448	116818222	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1323P	ENSG00000206752	32617	BX119904.1	ENSG00000224217	63571	None	None
MER61_Xq23b	HERV	MER61	internal	chrX	116927533	116928619	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SETP8	ENSG00000213526	34430	RNU6-1323P	ENSG00000206752	76588	None	None
MER4B_Xq23b	HERV	MER4B	internal	chrX	116931759	116941218	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SETP8	ENSG00000213526	21831	RNU6-1323P	ENSG00000206752	80814	None	None
MER4_Xq23c	HERV	MER4	oneside	chrX	116947474	116948996	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SETP8	ENSG00000213526	14053	RNU6-1323P	ENSG00000206752	96529	None	None
PRIMA41_Xq23b	HERV	PRIMA41	internal	chrX	117074660	117079842	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005002.2	ENSG00000238066	318096	SETP8	ENSG00000213526	110984	None	None
MER61_Xq23c	HERV	MER61	prototype	chrX	117172835	117178587	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SETP8	ENSG00000213526	209159	AC005002.2	ENSG00000238066	219351	None	None
HERVH_Xq23m	HERV	HERVH	prototype	chrX	117279323	117284879	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SETP8	ENSG00000213526	315647	AC005002.2	ENSG00000238066	113059	None	None
HERVH_Xq24a	HERV	HERVH	prototype	chrX	117417846	117422044	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005002.1	ENSG00000224314	17765	AC006963.2	ENSG00000279587	472588	None	None
HERVL_Xq24a	HERV	HERVL	oneside	chrX	117422838	117424085	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005002.1	ENSG00000224314	22757	AC006963.2	ENSG00000279587	470547	None	None
HERVL_Xq24b	HERV	HERVL	oneside	chrX	117651058	117652359	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005002.1	ENSG00000224314	250977	AC006963.2	ENSG00000279587	242273	None	None
HML1_Xq24	HERV	HML1	prototype	chrX	118293074	118300736	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	WDR44	ENSG00000131725	45337	AL391358.1	ENSG00000270619	9707	None	None
HERVP71A_Xq24	HERV	HERVP71A	prototype	chrX	118884537	118891744	+	noncoding	LINC01285	lncRNA	SENSE	ENSG00000203650	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrX:118884878-118884886
MER4_Xq24a	HERV	MER4	prototype	chrX	119309708	119317310	+	noncoding	AC004835.1	lncRNA	SENSE	ENSG00000230392	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xq24b	HERV	HERVH	prototype	chrX	119317773	119323471	-	noncoding	AC004835.1	lncRNA	ANTISENSE	ENSG00000230392	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Xq24b	HERV	MER4	oneside	chrX	120035005	120038005	+	noncoding	RHOXF1-AS1	lncRNA	SENSE	ENSG00000258545	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_Xq24a	HERV	MER41	internal	chrX	120067084	120068400	+	noncoding	RHOXF1-AS1	lncRNA	SENSE	ENSG00000258545	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_Xq24	HERV	HARLEQUIN	internal	chrX	120097944	120100486	+	noncoding	RHOXF1-AS1	lncRNA	SENSE	ENSG00000258545	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Xq24c	HERV	MER4	oneside	chrX	120101694	120103827	+	noncoding	RHOXF1-AS1	lncRNA	SENSE	ENSG00000258545	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_Xq24	HERV	HERVIP10FH	oneside	chrX	120143043	120145407	+	noncoding	RHOXF1-AS1,NKAPP1	lncRNA,transcribed_processed_pseudogene	SENSE,ANTISENSE	ENSG00000258545,ENSG00000233382	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrX:120143499-120143502
MER41_Xq24b	HERV	MER41	internal	chrX	120167902	120169218	-	noncoding	NKAPP1	transcribed_processed_pseudogene	SENSE	ENSG00000233382	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL18_Xq24	HERV	HERVL18	prototype	chrX	120205918	120208971	+	noncoding	NKAPP1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000233382	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Xq24d	HERV	MER4	prototype	chrX	120227768	120235797	+	coding	NKAPP1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000233382	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xq24a	HERV	ERV316A3	oneside	chrX	120400045	120402822	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATP1B4	ENSG00000101892	16796	LAMP2	ENSG00000005893	23326	None	None
MER34B_Xq24	HERV	MER34B	oneside	chrX	120512002	120512740	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-37P	ENSG00000251707	8906	CUL4B	ENSG00000158290	11872	None	None
ERV316A3_Xq24b	HERV	ERV316A3	oneside	chrX	120667692	120668758	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C1GALT1C1	ENSG00000171155	37638	H3P46	ENSG00000278317	40303	None	None
HUERSP1_Xq24	HERV	HUERSP1	oneside	chrX	121030055	121031653	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GLUD2	ENSG00000182890	15957	AC006144.1	ENSG00000233433	3492	None	None
PRIMA41_Xq24	HERV	PRIMA41	prototype	chrX	121151145	121155858	+	noncoding	AC002377.1	lncRNA	SENSE	ENSG00000286163	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xq24c	HERV	HERVH	prototype	chrX	121343896	121348628	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3672	ENSG00000265456	22344	AC002377.1	ENSG00000286163	45861	None	None
HERVL_Xq24c	HERV	HERVL	prototype	chrX	121449325	121455728	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3672	ENSG00000265456	78272	TPT1P13	ENSG00000213498	407970	None	None
ERVLE_Xq24	HERV	ERVLE	internal	chrX	121538387	121541566	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TPT1P13	ENSG00000213498	322132	MIR3672	ENSG00000265456	167334	None	None
ERVLB4_Xq24	HERV	ERVLB4	internal	chrX	121635051	121636749	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3672	ENSG00000265456	263998	TPT1P13	ENSG00000213498	226949	None	None
MER61_Xq25a	HERV	MER61	prototype	chrX	121903416	121909275	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359851.1	ENSG00000260585	26551	AL441985.1	ENSG00000237891	101701	None	None
MER4_Xq25a	HERV	MER4	prototype	chrX	121957103	121965158	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359851.1	ENSG00000260585	80238	AL441985.1	ENSG00000237891	45818	None	None
HERVL_Xq25a	HERV	HERVL	prototype	chrX	121974546	121981190	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359851.1	ENSG00000260585	97681	AL441985.1	ENSG00000237891	29786	None	None
ERV316A3_Xq25a	HERV	ERV316A3	internal	chrX	122114847	122115757	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357562.1	ENSG00000280142	126251	AL441985.1	ENSG00000237891	103235	None	None
MER61_Xq25b	HERV	MER61	unknown	chrX	122189961	122196793	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL441985.1	ENSG00000237891	178349	AL357562.1	ENSG00000280142	45215	None	None
HERVL_Xq25b	HERV	HERVL	oneside	chrX	122198470	122200000	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357562.1	ENSG00000280142	42008	AL441985.1	ENSG00000237891	186858	None	None
MER61_Xq25c	HERV	MER61	oneside	chrX	122219886	122222003	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL441985.1	ENSG00000237891	208274	AL357562.1	ENSG00000280142	20005	chrX:122220718-122221041	None
HERVH_Xq25a	HERV	HERVH	prototype	chrX	122222004	122227785	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL441985.1	ENSG00000237891	210392	AL357562.1	ENSG00000280142	14223	None	None
MER41_Xq25a	HERV	MER41	internal	chrX	122227788	122231275	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL441985.1	ENSG00000237891	216176	AL357562.1	ENSG00000280142	10733	None	None
MER41_Xq25b	HERV	MER41	internal	chrX	122238108	122238831	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL441985.1	ENSG00000237891	226496	AL357562.1	ENSG00000280142	3177	None	None
MER4_Xq25b	HERV	MER4	internal	chrX	122322510	122323361	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357562.1	ENSG00000280142	79894	AL513487.1	ENSG00000287776	98645	None	None
HERVL_Xq25c	HERV	HERVL	prototype	chrX	122335079	122338642	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL513487.1	ENSG00000287776	83364	AL357562.1	ENSG00000280142	92463	None	None
HERVL_Xq25d	HERV	HERVL	oneside	chrX	122451735	122457359	-	noncoding	AL513487.1	lncRNA	ANTISENSE	ENSG00000287776	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xq25e	HERV	HERVL	oneside	chrX	122609061	122613562	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL3P12	ENSG00000232496	69601	AL670318.1	ENSG00000212321	226864	None	None
LTR25_Xq25a	HERV	LTR25	internal	chrX	122613552	122615666	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL3P12	ENSG00000232496	74092	AL670318.1	ENSG00000212321	224760	None	None
HERVH48_Xq25	HERV	HERVH48	oneside	chrX	123130981	123132861	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRRFP1	ENSG00000224236	13200	GRIA3	ENSG00000125675	51292	None	None
ERV316A3_Xq25b	HERV	ERV316A3	oneside	chrX	123501894	123504514	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRIA3	ENSG00000125675	10979	H3P47	ENSG00000179101	9959	None	None
ERV316A3_Xq25c	HERV	ERV316A3	oneside	chrX	123509623	123513073	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRIA3	ENSG00000125675	18708	H3P47	ENSG00000179101	1400	None	None
HERVL_Xq25f	HERV	HERVL	oneside	chrX	123547924	123550520	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	H3P47	ENSG00000179101	33052	AL030996.1	ENSG00000229733	7830	None	None
ERVLE_Xq25	HERV	ERVLE	internal	chrX	123740784	123748574	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MEMO1P4	ENSG00000230376	16727	THOC2	ENSG00000125676	7728	None	None
HERVL_Xq25g	HERV	HERVL	prototype	chrX	124156239	124163053	-	noncoding	STAG2	protein_coding	ANTISENSE	ENSG00000101972	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_Xq25	HERV	HUERSP1	oneside	chrX	124163056	124164906	-	noncoding	STAG2	protein_coding	ANTISENSE	ENSG00000101972	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xq25b	HERV	HERVH	prototype	chrX	125388838	125394560	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645820.1	ENSG00000280223	609886	AL627231.1	ENSG00000213489	60817	None	None
HUERSP3_Xq25	HERV	HUERSP3	prototype	chrX	125432034	125440756	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645820.1	ENSG00000280223	563690	AL627231.1	ENSG00000213489	104013	None	None
MER61_Xq25d	HERV	MER61	prototype	chrX	125562146	125567747	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645820.1	ENSG00000280223	436699	AL627231.1	ENSG00000213489	234125	None	None
HERVL_Xq25h	HERV	HERVL	oneside	chrX	125636104	125641707	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645820.1	ENSG00000280223	362739	AL627231.1	ENSG00000213489	308083	None	None
LTR23_Xq25a	HERV	LTR23	oneside	chrX	125680435	125681463	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL627231.1	ENSG00000213489	352414	AL645820.1	ENSG00000280223	322983	None	None
LTR23_Xq25b	HERV	LTR23	oneside	chrX	125685250	125693643	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL627231.1	ENSG00000213489	357229	AL645820.1	ENSG00000280223	310803	None	None
HERVL_Xq25i	HERV	HERVL	internal	chrX	125726618	125727909	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645820.1	ENSG00000280223	276537	AL627231.1	ENSG00000213489	398597	None	None
HERVL_Xq25j	HERV	HERVL	oneside	chrX	125727957	125731271	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645820.1	ENSG00000280223	273175	AL627231.1	ENSG00000213489	399936	None	None
LTR25_Xq25b	HERV	LTR25	internal	chrX	125782291	125788696	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645820.1	ENSG00000280223	215750	AL627231.1	ENSG00000213489	454270	None	None
LTR25_Xq25c	HERV	LTR25	internal	chrX	125791629	125792416	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645820.1	ENSG00000280223	212030	AL627231.1	ENSG00000213489	463608	None	None
HERVL_Xq25k	HERV	HERVL	oneside	chrX	125809420	125811209	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645820.1	ENSG00000280223	193237	AL627231.1	ENSG00000213489	481399	None	None
HERVL_Xq25l	HERV	HERVL	oneside	chrX	125811261	125815674	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645820.1	ENSG00000280223	188772	AL627231.1	ENSG00000213489	483240	None	None
MER41_Xq25c	HERV	MER41	internal	chrX	125932492	125935175	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645820.1	ENSG00000280223	69271	AL627231.1	ENSG00000213489	604471	None	None
HERVL_Xq25m	HERV	HERVL	prototype	chrX	126034943	126042975	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645820.1	ENSG00000280223	28825	AL445072.1	ENSG00000237208	66787	None	None
HERVL_Xq25n	HERV	HERVL	prototype	chrX	126093604	126099583	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445072.1	ENSG00000237208	10179	AL645820.1	ENSG00000280223	87486	None	None
HERVL_Xq25o	HERV	HERVL	oneside	chrX	126226684	126229175	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DCAF12L2	ENSG00000198354	60395	MTCO1P53	ENSG00000230916	242530	None	None
HERVL_Xq25p	HERV	HERVL	prototype	chrX	126295798	126299710	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO1P53	ENSG00000230916	171995	DCAF12L2	ENSG00000198354	129509	None	None
MER4B_Xq25a	HERV	MER4B	internal	chrX	126513279	126514231	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DCAF12L1	ENSG00000198889	35152	Z69908.1	ENSG00000274901	10124	None	None
MER34B_Xq25	HERV	MER34B	oneside	chrX	126791598	126793228	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCYBP38	ENSG00000226414	61372	PRR32	ENSG00000183631	26501	None	None
HERVH_Xq25c	HERV	HERVH	prototype	chrX	126863047	126868992	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRR32	ENSG00000183631	41261	Z82209.1	ENSG00000230538	521350	None	None
HERVL_Xq25q	HERV	HERVL	unknown	chrX	126938842	126945509	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	Z82209.1	ENSG00000230538	444833	PRR32	ENSG00000183631	117056	None	None
MER61_Xq25e	HERV	MER61	internal	chrX	126965849	126969142	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRR32	ENSG00000183631	144063	Z82209.1	ENSG00000230538	421200	None	None
PABLA_Xq25	HERV	PABLA	prototype	chrX	126985454	126991991	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PRR32	ENSG00000183631	163668	Z82209.1	ENSG00000230538	398351	None	None
MER4B_Xq25b	HERV	MER4B	internal	chrX	127136905	127139785	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRR32	ENSG00000183631	315119	Z82209.1	ENSG00000230538	250557	None	None
HERVL_Xq25r	HERV	HERVL	oneside	chrX	127207136	127208793	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z82209.1	ENSG00000230538	181549	PRR32	ENSG00000183631	385350	None	None
HERVH_Xq25d	HERV	HERVH	oneside	chrX	127228073	127232994	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRR32	ENSG00000183631	406287	Z82209.1	ENSG00000230538	157348	None	None
ERVL_Xq25a	HERV	ERVL	oneside	chrX	127241952	127243655	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRR32	ENSG00000183631	420166	Z82209.1	ENSG00000230538	146687	None	None
ERVLB4_Xq25a	HERV	ERVLB4	oneside	chrX	127285483	127291163	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z82209.1	ENSG00000230538	99179	PRR32	ENSG00000183631	463697	None	None
HERV9_Xq25	HERV	HERV9	oneside	chrX	127394637	127402755	+	coding	Z82209.2	TEC	SENSE	ENSG00000280275	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrX:127395073-127395080
ERVL_Xq25b	HERV	ERVL	prototype	chrX	127509820	127513266	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z82209.2	ENSG00000280275	115049	AL662814.1	ENSG00000274631	110144	None	None
HERVL_Xq25s	HERV	HERVL	oneside	chrX	127604795	127606102	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z82209.2	ENSG00000280275	210024	AL662814.1	ENSG00000274631	17308	None	None
ERVL_Xq25c	HERV	ERVL	oneside	chrX	127670428	127676734	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591643.1	ENSG00000260683	7898	Z75741.2	ENSG00000235274	52000	None	None
HERVL_Xq25t	HERV	HERVL	oneside	chrX	127705912	127708083	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591643.1	ENSG00000260683	43382	Z75741.2	ENSG00000235274	20651	None	None
ERVLB4_Xq25b	HERV	ERVLB4	oneside	chrX	127755272	127756783	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z75741.2	ENSG00000235274	24414	Z75741.1	ENSG00000224548	39341	None	None
HERVL74_Xq25	HERV	HERVL74	internal	chrX	127885634	127888607	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL008633.1	ENSG00000225689	138715	Z75741.1	ENSG00000224548	88901	None	None
ERVLB4_Xq25c	HERV	ERVLB4	oneside	chrX	127895304	127897547	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z75741.1	ENSG00000224548	98571	AL008633.1	ENSG00000225689	129775	None	None
HERVFRD_Xq25	HERV	HERVFRD	internal	chrX	127900038	127901502	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z75741.1	ENSG00000224548	103305	AL008633.1	ENSG00000225689	125820	None	None
HERVL_Xq25u	HERV	HERVL	prototype	chrX	127935719	127939710	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL008633.1	ENSG00000225689	87612	Z75741.1	ENSG00000224548	138986	None	None
LTR57_Xq25	HERV	LTR57	oneside	chrX	127974606	127976996	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z75741.1	ENSG00000224548	177873	AL008633.1	ENSG00000225689	50326	None	None
MER4_Xq25c	HERV	MER4	prototype	chrX	128078431	128085763	-	noncoding	AL008633.1	lncRNA	SENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Xq25d	HERV	MER4	oneside	chrX	128114060	128118709	-	noncoding	AL008633.1	lncRNA	SENSE	ENSG00000225689	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_Xq25e	HERV	MER4	oneside	chrX	128118931	128121753	-	noncoding	AL008633.1	lncRNA	SENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_Xq25c	HERV	MER4B	internal	chrX	128140917	128141802	-	noncoding	AL008633.1	lncRNA	SENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Xq25f	HERV	MER4	internal	chrX	128141802	128142883	-	noncoding	AL008633.1	lncRNA	SENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xq25d	HERV	ERV316A3	oneside	chrX	128165831	128171487	+	noncoding	AL008633.1	lncRNA	ANTISENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xq25e	HERV	HERVH	oneside	chrX	128262787	128264251	-	noncoding	AL008633.1	lncRNA	SENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xq25d	HERV	ERVLB4	oneside	chrX	128277050	128278477	+	noncoding	AL008633.1	lncRNA	ANTISENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xq25v	HERV	HERVL	prototype	chrX	128415582	128422216	+	noncoding	AL008633.1	lncRNA	ANTISENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_Xq26.1	HERV	MER41	oneside	chrX	129872871	129875304	+	noncoding	AL034405.1,SALL4P2	lncRNA,processed_pseudogene	ANTISENSE,SENSE	ENSG00000235189,ENSG00000238040	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xq26.1	HERV	HERVH	prototype	chrX	130277374	130280192	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF280C	ENSG00000056277	8475	RNU6-1130P	ENSG00000202304	29880	None	None
HERV4_Xq26.1	HERV	HERV4	prototype	chrX	130280193	130287888	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF280C	ENSG00000056277	11294	RNU6-1130P	ENSG00000202304	22184	None	None
ERV316A3_Xq26.1	HERV	ERV316A3	prototype	chrX	130414503	130417761	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z82195.2	ENSG00000274775	27324	RBMX2	ENSG00000134597	847	None	None
ERVLE_Xq26.1	HERV	ERVLE	internal	chrX	131164905	131169303	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL191P	ENSG00000241198	30515	OR11Q1P	ENSG00000237650	34765	None	None
ERVLE_Xq26.2a	HERV	ERVLE	internal	chrX	131660939	131663952	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HDGFP1	ENSG00000227183	14049	FIRRE	ENSG00000213468	24827	None	None
MER4B_Xq26.2a	HERV	MER4B	unknown	chrX	131689719	131692783	-	noncoding	FIRRE	lncRNA	SENSE	ENSG00000213468	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4B_Xq26.2b	HERV	MER4B	oneside	chrX	131692832	131696311	-	noncoding	FIRRE	lncRNA	SENSE	ENSG00000213468	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_Xq26.2a	HERV	MER41	internal	chrX	131708033	131709112	-	noncoding	FIRRE	lncRNA	SENSE	ENSG00000213468	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xq26.2	HERV	HERVH	prototype	chrX	131712025	131717764	+	noncoding	FIRRE	lncRNA	ANTISENSE	ENSG00000213468	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH48_Xq26.2	HERV	HERVH48	oneside	chrX	131850943	131852494	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL008629.1	ENSG00000235190	85176	FIRRE	ENSG00000213468	20081	None	None
ERVLE_Xq26.2b	HERV	ERVLE	internal	chrX	131858801	131861507	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL008629.1	ENSG00000235190	76163	FIRRE	ENSG00000213468	27939	None	None
ERVLE_Xq26.2c	HERV	ERVLE	internal	chrX	131871587	131879717	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL008629.1	ENSG00000235190	57953	FIRRE	ENSG00000213468	40725	None	None
ERVLB4_Xq26.2a	HERV	ERVLB4	internal	chrX	131906090	131909121	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL008629.1	ENSG00000235190	28549	FIRRE	ENSG00000213468	75228	None	None
HERVW_Xq26.2	HERV	HERVW	internal	chrX	131929251	131933044	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL008629.1	ENSG00000235190	4626	FIRRE	ENSG00000213468	98389	None	None
HERVL_Xq26.2	HERV	HERVL	oneside	chrX	131949841	131951578	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP514	ENSG00000200587	10885	STK26	ENSG00000134602	71724	None	None
ERVLB4_Xq26.2b	HERV	ERVLB4	internal	chrX	132294833	132297183	-	noncoding	RAP2C-AS1	lncRNA	ANTISENSE	ENSG00000232160	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_Xq26.2d	HERV	ERVLE	internal	chrX	133005313	133007830	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HS6ST2	ENSG00000171004	43918	USP26	ENSG00000134588	16801	None	None
ERVLE_Xq26.2e	HERV	ERVLE	internal	chrX	133107116	133107986	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	USP26	ENSG00000134588	10007	Z77249.2	ENSG00000225949	33314	None	None
ERVLE_Xq26.2f	HERV	ERVLE	internal	chrX	133116929	133118147	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	USP26	ENSG00000134588	19820	Z77249.2	ENSG00000225949	23153	None	None
ERVL_Xq26.2	HERV	ERVL	oneside	chrX	134092994	134099634	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF003529.1	ENSG00000232068	102908	AC002407.1	ENSG00000200572	42594	None	None
ERVLE_Xq26.2g	HERV	ERVLE	internal	chrX	134127824	134131342	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF003529.1	ENSG00000232068	137738	AC002407.1	ENSG00000200572	10886	None	None
MER41_Xq26.2b	HERV	MER41	oneside	chrX	134214682	134217740	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC160	ENSG00000203952	19307	LARP1BP3	ENSG00000232664	8766	None	None
LTR25_Xq26.2	HERV	LTR25	internal	chrX	134218054	134220891	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC160	ENSG00000203952	16156	LARP1BP3	ENSG00000232664	12138	None	None
ERV316A3_Xq26.2	HERV	ERV316A3	prototype	chrX	134253255	134261215	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FO393409.1	ENSG00000214961	11072	CCDC160	ENSG00000203952	7048	None	None
HERVL40_Xq26.3	HERV	HERVL40	prototype	chrX	134972020	134977980	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P31	ENSG00000231929	9715	SMIM10	ENSG00000184785	13011	None	None
ERVLE_Xq26.3a	HERV	ERVLE	internal	chrX	134981596	134985519	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SMIM10	ENSG00000184785	5472	HMGB3P31	ENSG00000231929	19291	None	None
ERVLE_Xq26.3b	HERV	ERVLE	internal	chrX	135178191	135178875	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC234771.4	ENSG00000236491	1380	CT55	ENSG00000169551	6793	None	None
ERVLE_Xq26.3c	HERV	ERVLE	internal	chrX	135270491	135271364	-	noncoding	ZNF75D	protein_coding	SENSE	ENSG00000186376	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xq26.3a	HERV	ERVLB4	internal	chrX	135340709	135342184	+	noncoding	ZNF75D	protein_coding	ANTISENSE	ENSG00000186376	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xq26.3a	HERV	HERVL	prototype	chrX	135393377	135395574	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF449	ENSG00000173275	29964	AL450472.1	ENSG00000229015	855	None	chrX:135395304-135395311
ERVLE_Xq26.3d	HERV	ERVLE	internal	chrX	135401773	135402553	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SMIM10L2A	ENSG00000178947	19391	AL450472.1	ENSG00000229015	4009	None	None
ERVLE_Xq26.3e	HERV	ERVLE	internal	chrX	135404075	135405758	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450472.1	ENSG00000229015	6311	SMIM10L2A	ENSG00000178947	16186	None	None
ERVLB4_Xq26.3b	HERV	ERVLB4	internal	chrX	135444619	135445447	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450472.3	ENSG00000273988	450	CROCCP1	ENSG00000225769	5985	None	None
ERVLE_Xq26.3f	HERV	ERVLE	oneside	chrX	135591861	135592930	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SAGE4P	ENSG00000224539	5997	AL391380.1	ENSG00000237833	6701	None	None
ERVLB4_Xq26.3c	HERV	ERVLB4	internal	chrX	135615673	135620339	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SAGE3P	ENSG00000277486	17284	SAGE4P	ENSG00000224539	242	None	None
HERV4_Xq26.3a	HERV	HERV4	internal	chrX	135626015	135631476	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SAGE3P	ENSG00000277486	6147	SAGE4P	ENSG00000224539	10584	None	None
ERVLB4_Xq26.3d	HERV	ERVLB4	internal	chrX	135636182	135637355	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SAGE4P	ENSG00000224539	20751	SAGE3P	ENSG00000277486	268	None	None
HERV4_Xq26.3b	HERV	HERV4	internal	chrX	135650932	135655442	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SAGE3P	ENSG00000277486	8176	SAGE2P	ENSG00000198022	18149	None	None
ERVLB4_Xq26.3e	HERV	ERVLB4	internal	chrX	135668676	135673348	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SAGE3P	ENSG00000277486	25920	SAGE2P	ENSG00000198022	243	None	None
PRIMA41_Xq26.3a	HERV	PRIMA41	internal	chrX	135699725	135702869	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SAGE2P	ENSG00000198022	13574	AC240442.1	ENSG00000274601	7226	None	None
ERVLB4_Xq26.3f	HERV	ERVLB4	oneside	chrX	135704187	135705363	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC240442.1	ENSG00000274601	4732	SAGE2P	ENSG00000198022	18036	None	None
ERVLB4_Xq26.3g	HERV	ERVLB4	internal	chrX	135710350	135711089	-	noncoding	AC240442.1	unprocessed_pseudogene	SENSE	ENSG00000274601	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xq26.3h	HERV	ERVLB4	internal	chrX	135729071	135729820	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MGAT2P1	ENSG00000233861	913	CT45A1	ENSG00000268940	5532	None	None
ERVLE_Xq26.3g	HERV	ERVLE	oneside	chrX	135733524	135735793	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MGAT2P2	ENSG00000238200	15326	MGAT2P1	ENSG00000233861	1327	None	None
ERVL_Xq26.3	HERV	ERVL	internal	chrX	135738163	135739412	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MGAT2P1	ENSG00000233861	5966	MGAT2P2	ENSG00000238200	11707	None	None
HML1_Xq26.3	HERV	HML1	oneside	chrX	135745315	135747484	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MGAT2P1	ENSG00000233861	13118	MGAT2P2	ENSG00000238200	3635	None	None
ERVLE_Xq26.3h	HERV	ERVLE	internal	chrX	135747490	135749792	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MGAT2P1	ENSG00000233861	15293	MGAT2P2	ENSG00000238200	1327	None	None
ERVLB4_Xq26.3i	HERV	ERVLB4	internal	chrX	135753496	135754245	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MGAT2P2	ENSG00000238200	913	CT45A3	ENSG00000269096	5601	None	None
ERVLB4_Xq26.3j	HERV	ERVLB4	internal	chrX	135770657	135771374	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CT45A3	ENSG00000269096	2466	CT45A5	ENSG00000228836	5756	None	None
ERVLB4_Xq26.3k	HERV	ERVLB4	internal	chrX	135772555	135774476	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CT45A3	ENSG00000269096	4364	CT45A5	ENSG00000228836	2654	None	None
ERVLB4_Xq26.3l	HERV	ERVLB4	internal	chrX	135787920	135788636	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CT45A5	ENSG00000228836	2622	CT45A6	ENSG00000278289	6070	None	None
ERVLB4_Xq26.3m	HERV	ERVLB4	internal	chrX	135789817	135791738	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CT45A5	ENSG00000228836	4519	CT45A6	ENSG00000278289	2968	None	None
ERVLB4_Xq26.3n	HERV	ERVLB4	internal	chrX	135805192	135805909	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CT45A6	ENSG00000278289	2536	CT45A2	ENSG00000271449	5759	None	None
ERVLB4_Xq26.3o	HERV	ERVLB4	internal	chrX	135807090	135809011	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CT45A6	ENSG00000278289	4434	CT45A2	ENSG00000271449	2657	None	None
ERVLB4_Xq26.3p	HERV	ERVLB4	internal	chrX	135822457	135823174	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CT45A2	ENSG00000271449	2445	CT45A7	ENSG00000273696	6073	None	None
ERVLB4_Xq26.3q	HERV	ERVLB4	internal	chrX	135824356	135826277	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CT45A2	ENSG00000271449	4344	CT45A7	ENSG00000273696	2970	None	None
ERVLB4_Xq26.3r	HERV	ERVLB4	internal	chrX	135839713	135840429	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CT45A7	ENSG00000273696	2445	CT45A8	ENSG00000278085	6068	None	None
ERVLB4_Xq26.3s	HERV	ERVLB4	internal	chrX	135841610	135843531	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CT45A7	ENSG00000273696	4342	CT45A8	ENSG00000278085	2966	None	None
ERVLB4_Xq26.3t	HERV	ERVLB4	internal	chrX	135856995	135857712	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CT45A8	ENSG00000278085	2457	CT45A9	ENSG00000270946	5706	None	None
ERVLB4_Xq26.3u	HERV	ERVLB4	internal	chrX	135858893	135860814	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CT45A8	ENSG00000278085	4355	CT45A9	ENSG00000270946	2604	None	None
ERVLB4_Xq26.3v	HERV	ERVLB4	internal	chrX	135874275	135874991	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CT45A9	ENSG00000270946	2463	CT45A10	ENSG00000269586	6072	None	None
ERVLB4_Xq26.3w	HERV	ERVLB4	internal	chrX	135876172	135878093	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CT45A9	ENSG00000270946	4360	CT45A10	ENSG00000269586	2970	None	None
ERVLB4_Xq26.3x	HERV	ERVLB4	internal	chrX	135913134	135918031	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CT45A11P	ENSG00000230162	24447	SAGE1	ENSG00000181433	73	None	None
PRIMA41_Xq26.3b	HERV	PRIMA41	internal	chrX	135923357	135925545	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CT45A11P	ENSG00000230162	16933	SAGE1	ENSG00000181433	10296	None	None
ERVLE_Xq26.3i	HERV	ERVLE	internal	chrX	135932504	135935856	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SAGE1	ENSG00000181433	19443	CT45A11P	ENSG00000230162	6622	None	None
ERVLE_Xq26.3j	HERV	ERVLE	internal	chrX	135941877	135942764	+	noncoding	CT45A11P	unprocessed_pseudogene	ANTISENSE	ENSG00000230162	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xq26.3b	HERV	HERVL	oneside	chrX	136381626	136383069	-	noncoding	ADGRG4	protein_coding	ANTISENSE	ENSG00000156920	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xq26.3y	HERV	ERVLB4	internal	chrX	136821347	136826832	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL683813.1	ENSG00000202279	4773	AL683813.2	ENSG00000232611	14099	None	None
ERV316A3_Xq26.3a	HERV	ERV316A3	oneside	chrX	136827470	136828656	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL683813.1	ENSG00000202279	10896	AL683813.2	ENSG00000232611	12275	None	None
HERV3_Xq26.3	HERV	HERV3	internal	chrX	136931323	136936168	-	noncoding	AL390879.1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000234062	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chrX:136931943-136931946
ERV316A3_Xq26.3b	HERV	ERV316A3	oneside	chrX	137938665	137941674	+	noncoding	Z96074.1	lncRNA	SENSE	ENSG00000283692	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
LTR57_Xq26.3	HERV	LTR57	oneside	chrX	138124506	138127818	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP31	ENSG00000252163	269533	Z96074.1	ENSG00000283692	142726	None	None
ERVLE_Xq26.3k	HERV	ERVLE	oneside	chrX	138139181	138141495	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP31	ENSG00000252163	255856	Z96074.1	ENSG00000283692	157401	None	None
HERVH_Xq26.3a	HERV	HERVH	prototype	chrX	138258661	138264347	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z96074.1	ENSG00000283692	276881	RN7SKP31	ENSG00000252163	133004	None	None
HERVH_Xq26.3b	HERV	HERVH	prototype	chrX	138264358	138270335	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP31	ENSG00000252163	127016	Z96074.1	ENSG00000283692	282578	None	None
ERV316A3_Xq26.3c	HERV	ERV316A3	internal	chrX	138330638	138334582	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP31	ENSG00000252163	62769	Z96074.1	ENSG00000283692	348858	None	chrX:138334277-138334287
ERV316A3_Xq26.3d	HERV	ERV316A3	internal	chrX	138433851	138434964	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAGEA13P	ENSG00000183981	47781	RN7SKP31	ENSG00000252163	36223	None	None
HERVL_Xq27.1a	HERV	HERVL	oneside	chrX	139396228	139402644	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SNURFL	ENSG00000173954	33846	SRD5A1P1	ENSG00000232549	44247	None	None
ERV316A3_Xq27.1a	HERV	ERV316A3	oneside	chrX	139405275	139407675	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SNURFL	ENSG00000173954	42893	SRD5A1P1	ENSG00000232549	39216	None	None
ERV316A3_Xq27.1b	HERV	ERV316A3	oneside	chrX	139414851	139418884	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SNURFL	ENSG00000173954	52469	SRD5A1P1	ENSG00000232549	28007	None	None
HERVIP10FH_Xq27.1	HERV	HERVIP10FH	prototype	chrX	139852178	139857785	+	noncoding	ATP11C	protein_coding	ANTISENSE	ENSG00000101974	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_Xq27.1	HERV	ERVLE	internal	chrX	139943782	139944632	-	noncoding	ATP11C	protein_coding	SENSE	ENSG00000101974	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xq27.1c	HERV	ERV316A3	oneside	chrX	139995166	139996414	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CXorf66	ENSG00000203933	29645	AL589987.2	ENSG00000233145	20854	None	None
HERVW_Xq27.1	HERV	HERVW	oneside	chrX	140077596	140080821	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA3P3	ENSG00000214653	44116	RN7SL727P	ENSG00000241248	5034	None	None
HERVL_Xq27.1b	HERV	HERVL	prototype	chrX	140255030	140261622	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137014.1	ENSG00000224942	135440	FO393408.1	ENSG00000231110	38226	None	None
ERV316A3_Xq27.1d	HERV	ERV316A3	oneside	chrX	140665782	140666889	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL844175.1	ENSG00000230668	14217	SOX3	ENSG00000134595	160666	None	None
ERV316A3_Xq27.1e	HERV	ERV316A3	oneside	chrX	140672540	140673956	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL844175.1	ENSG00000230668	7150	SOX3	ENSG00000134595	167424	None	None
HUERSP3_Xq27.1	HERV	HUERSP3	prototype	chrX	140817246	140821786	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR320D2	ENSG00000221081	104386	LINC00632	ENSG00000203930	24031	None	chrX:140821353-140821360
MER41_Xq27.1a	HERV	MER41	prototype	chrX	140895025	140900915	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR320D2	ENSG00000221081	25257	LINC00632	ENSG00000203930	101810	None	None
MER41_Xq27.1b	HERV	MER41	oneside	chrX	140922796	140924316	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR320D2	ENSG00000221081	1856	LINC00632	ENSG00000203930	129581	None	None
ERV316A3_Xq27.1f	HERV	ERV316A3	internal	chrX	140962046	140964235	+	noncoding	AL451048.1	lncRNA	SENSE	ENSG00000229269	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Xq27.1a	HERV	MER4	oneside	chrX	140996209	140999680	+	noncoding	AL451048.1	lncRNA	SENSE	ENSG00000229269	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_Xq27.1b	HERV	MER4	internal	chrX	140999977	141001661	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL451048.1	ENSG00000229269	2529	SPANXB1	ENSG00000227234	933	None	None
LTR19_Xq27.1	HERV	LTR19	oneside	chrX	141010501	141014779	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SPANXB1	ENSG00000227234	6795	LDOC1	ENSG00000182195	96826	None	None
HML6_Xq27.1	HERV	HML6	oneside	chrX	141196490	141199480	-	noncoding	SPANXA2-OT1	lncRNA	ANTISENSE	ENSG00000277215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_Xq27.2a	HERV	LTR19	internal	chrX	141231382	141235224	-	noncoding	SPANXA2-OT1	lncRNA	ANTISENSE	ENSG00000277215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Xq27.2a	HERV	MER4	internal	chrX	141243490	141245174	-	coding	SPANXA2-OT1	lncRNA	ANTISENSE	ENSG00000277215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Xq27.2b	HERV	MER4	oneside	chrX	141245474	141248919	-	noncoding	SPANXA2-OT1	lncRNA	ANTISENSE	ENSG00000277215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_Xq27.2b	HERV	LTR19	oneside	chrX	141572611	141576889	-	coding	SPANXA2-OT1	lncRNA	ANTISENSE	ENSG00000277215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Xq27.2c	HERV	MER4	internal	chrX	141585274	141586746	+	noncoding	SPANXA2-OT1	lncRNA	SENSE	ENSG00000277215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Xq27.2d	HERV	MER4	internal	chrX	141587046	141588740	+	noncoding	SPANXA2-OT1	lncRNA	SENSE	ENSG00000277215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_Xq27.2c	HERV	LTR19	prototype	chrX	141597534	141602118	+	coding	SPANXA2-OT1	lncRNA	SENSE	ENSG00000277215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_Xq27.2d	HERV	LTR19	oneside	chrX	141686291	141690632	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SPANXD	ENSG00000196406	6779	SPANXA2-OT1	ENSG00000277215	36364	None	None
MER4_Xq27.2e	HERV	MER4	internal	chrX	141699435	141700646	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MAGEC3	ENSG00000165509	137670	SPANXD	ENSG00000196406	696	None	None
LTR25_Xq27.2	HERV	LTR25	internal	chrX	141867617	141873017	-	noncoding	MAGEC3	protein_coding	ANTISENSE	ENSG00000165509	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xq27.2a	HERV	HERVL	prototype	chrX	141884079	141890195	+	coding	MAGEC3	protein_coding	SENSE	ENSG00000165509	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_Xq27.2	HERV	MER61	oneside	chrX	141934262	141939406	+	coding	AL031073.2	lncRNA	SENSE	ENSG00000288098	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4B_Xq27.2a	HERV	MER4B	internal	chrX	142080807	142086581	+	noncoding	AL031073.2	lncRNA	SENSE	ENSG00000288098	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xq27.2a	HERV	ERV316A3	oneside	chrX	142128668	142131298	-	noncoding	AL031073.2	lncRNA	ANTISENSE	ENSG00000288098	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xq27.2a	HERV	HERVH	prototype	chrX	142227427	142233058	+	noncoding	AL031073.2	lncRNA	SENSE	ENSG00000288098	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVEA_Xq27.2	HERV	HERVEA	prototype	chrX	142265140	142273981	+	noncoding	AL031073.2	lncRNA	SENSE	ENSG00000288098	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_Xq27.2b	HERV	MER4B	oneside	chrX	142415548	142419524	+	noncoding	AL031073.2	lncRNA	SENSE	ENSG00000288098	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xq27.2b	HERV	HERVH	prototype	chrX	142423376	142428961	-	noncoding	AL031073.2	lncRNA	ANTISENSE	ENSG00000288098	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xq27.2b	HERV	ERV316A3	oneside	chrX	142490459	142491962	-	noncoding	AL031073.2	lncRNA	ANTISENSE	ENSG00000288098	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xq27.2a	HERV	ERVLB4	oneside	chrX	142728473	142733922	+	noncoding	AL031073.2	lncRNA	SENSE	ENSG00000288098	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xq27.2c	HERV	ERV316A3	oneside	chrX	142738282	142740821	-	noncoding	AL031073.2	lncRNA	ANTISENSE	ENSG00000288098	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLE_Xq27.2	HERV	ERVLE	internal	chrX	142741423	142743040	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031073.2	ENSG00000288098	842	SPANXN4	ENSG00000189326	282878	None	None
ERV316A3_Xq27.2d	HERV	ERV316A3	prototype	chrX	142775404	142779934	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031073.2	ENSG00000288098	34823	SPANXN4	ENSG00000189326	245984	None	None
ERVLB4_Xq27.2b	HERV	ERVLB4	oneside	chrX	142780739	142783507	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031073.2	ENSG00000288098	40158	SPANXN4	ENSG00000189326	242411	None	None
ERVLB4_Xq27.2c	HERV	ERVLB4	internal	chrX	142879881	142883099	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031073.2	ENSG00000288098	139300	SPANXN4	ENSG00000189326	142819	None	None
HERVL_Xq27.2b	HERV	HERVL	prototype	chrX	142915963	142922772	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031073.2	ENSG00000288098	175382	SPANXN4	ENSG00000189326	103146	None	None
LTR46_Xq27.3a	HERV	LTR46	prototype	chrX	143026100	143033837	-	noncoding	SPANXN4	protein_coding	ANTISENSE	ENSG00000189326	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xq27.3a	HERV	HERVL	prototype	chrX	143110818	143111852	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP81	ENSG00000202473	20141	RN7SKP149	ENSG00000199878	85396	None	None
MER61_Xq27.3a	HERV	MER61	oneside	chrX	143139823	143143437	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP149	ENSG00000199878	53811	RN7SKP81	ENSG00000202473	49146	None	None
MER4_Xq27.3a	HERV	MER4	internal	chrX	143420652	143421402	+	noncoding	AC239727.1	lncRNA	SENSE	ENSG00000227303	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_Xq27.3a	HERV	HERVH	oneside	chrX	143502197	143504455	-	noncoding	AC239727.1	lncRNA	ANTISENSE	ENSG00000227303	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR46_Xq27.3b	HERV	LTR46	prototype	chrX	143509351	143517306	+	noncoding	AC239727.1,SPANXN3	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000227303,ENSG00000189252	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
LTR46_Xq27.3c	HERV	LTR46	prototype	chrX	143712688	143720583	+	noncoding	SPANXN2	protein_coding	ANTISENSE	ENSG00000268988	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xq27.3b	HERV	HERVL	oneside	chrX	143996479	143998807	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC234064.1	ENSG00000224630	310027	UBE2NL	ENSG00000276380	111224	None	None
ERVLE_Xq27.3a	HERV	ERVLE	internal	chrX	144054888	144056733	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC234064.1	ENSG00000224630	252101	UBE2NL	ENSG00000276380	169633	None	None
MER4_Xq27.3b	HERV	MER4	oneside	chrX	144146592	144147940	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC234064.1	ENSG00000224630	160894	UBE2NL	ENSG00000276380	261337	None	None
HUERSP2_Xq27.3a	HERV	HUERSP2	internal	chrX	144171196	144172058	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC234064.1	ENSG00000224630	136776	UBE2NL	ENSG00000276380	285941	None	None
ERVLB4_Xq27.3a	HERV	ERVLB4	oneside	chrX	144173835	144175503	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC234064.1	ENSG00000224630	133331	UBE2NL	ENSG00000276380	288580	None	None
HUERSP2_Xq27.3b	HERV	HUERSP2	prototype	chrX	144331053	144336372	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPCP10	ENSG00000215054	504405	RRM2P4	ENSG00000235598	21360	None	None
HERVL_Xq27.3c	HERV	HERVL	prototype	chrX	144346168	144351079	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPCP10	ENSG00000215054	489698	RRM2P4	ENSG00000235598	36475	None	None
MER4_Xq27.3c	HERV	MER4	internal	chrX	144602889	144607197	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPCP10	ENSG00000215054	233580	RRM2P4	ENSG00000235598	293196	None	None
MER4_Xq27.3d	HERV	MER4	oneside	chrX	144678014	144681364	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RRM2P4	ENSG00000235598	368321	HNRNPCP10	ENSG00000215054	159413	None	None
MER4B_Xq27.3a	HERV	MER4B	internal	chrX	144679545	144680417	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RRM2P4	ENSG00000235598	369852	HNRNPCP10	ENSG00000215054	160360	None	None
MER4_Xq27.3e	HERV	MER4	oneside	chrX	144682038	144686603	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RRM2P4	ENSG00000235598	372345	HNRNPCP10	ENSG00000215054	154174	None	None
MER61_Xq27.3b	HERV	MER61	prototype	chrX	144717374	144722915	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RRM2P4	ENSG00000235598	407681	HNRNPCP10	ENSG00000215054	117862	None	None
MER4B_Xq27.3b	HERV	MER4B	oneside	chrX	144738755	144742822	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RRM2P4	ENSG00000235598	429062	HNRNPCP10	ENSG00000215054	97955	None	None
PRIMA4_Xq27.3	HERV	PRIMA4	oneside	chrX	144907695	144914115	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPCP10	ENSG00000215054	66035	RN7SKP189	ENSG00000201912	142993	None	None
MER4_Xq27.3f	HERV	MER4	internal	chrX	144914110	144919568	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP189	ENSG00000201912	137540	HNRNPCP10	ENSG00000215054	72450	None	None
MER4_Xq27.3g	HERV	MER4	oneside	chrX	144919592	144921152	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP189	ENSG00000201912	135956	HNRNPCP10	ENSG00000215054	77932	None	None
ERVLB4_Xq27.3b	HERV	ERVLB4	oneside	chrX	144973629	144975709	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPCP10	ENSG00000215054	131969	RN7SKP189	ENSG00000201912	81399	None	None
MER4B_Xq27.3c	HERV	MER4B	internal	chrX	145002312	145003425	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP189	ENSG00000201912	53683	HNRNPCP10	ENSG00000215054	160652	None	None
ERV316A3_Xq27.3a	HERV	ERV316A3	oneside	chrX	145056236	145061665	+	noncoding	RN7SKP189	misc_RNA	SENSE	ENSG00000201912	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xq27.3b	HERV	ERV316A3	oneside	chrX	145163963	145164729	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYCSP44	ENSG00000233548	11853	RN7SKP189	ENSG00000201912	106526	None	None
LTR46_Xq27.3d	HERV	LTR46	prototype	chrX	145247669	145255482	-	noncoding	SPANXN1	protein_coding	ANTISENSE	ENSG00000203923	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chrX:145254330-145254558	None
MER61_Xq27.3c	HERV	MER61	prototype	chrX	145467160	145472734	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPANXN1	ENSG00000203923	210952	AL391256.1	ENSG00000231093	157484	None	None
ERVLB4_Xq27.3c	HERV	ERVLB4	oneside	chrX	145539818	145541290	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPANXN1	ENSG00000203923	283610	AL391256.1	ENSG00000231093	88928	None	None
MER4_Xq27.3h	HERV	MER4	prototype	chrX	145664439	145669242	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL391256.1	ENSG00000231093	32064	AL109653.3	ENSG00000286085	29814	None	None
MER61_Xq27.3d	HERV	MER61	oneside	chrX	145715468	145716657	+	noncoding	AL109653.3	lncRNA	ANTISENSE	ENSG00000286085	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_Xq27.3	HERV	LTR57	oneside	chrX	145919543	145924944	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLITRK2	ENSG00000185985	89687	MIR892C	ENSG00000252219	67806	None	None
HERVL_Xq27.3d	HERV	HERVL	oneside	chrX	145938594	145940453	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLITRK2	ENSG00000185985	108738	MIR892C	ENSG00000252219	52297	None	None
HERVIP10FH_Xq27.3	HERV	HERVIP10FH	oneside	chrX	145970461	145974662	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLITRK2	ENSG00000185985	140605	MIR892C	ENSG00000252219	18088	None	None
HERVIP10F_Xq27.3	HERV	HERVIP10F	oneside	chrX	145975964	145977739	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLITRK2	ENSG00000185985	146108	MIR892C	ENSG00000252219	15011	None	None
MER101_Xq27.3	HERV	MER101	oneside	chrX	146029510	146030727	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP517	ENSG00000201594	396729	MIR891A	ENSG00000216056	1638	None	None
HERVL_Xq27.3e	HERV	HERVL	internal	chrX	146312957	146316323	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP517	ENSG00000201594	111133	MIR891A	ENSG00000216056	285085	None	None
MER4_Xq27.3i	HERV	MER4	oneside	chrX	146439867	146446789	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL109913.1	ENSG00000234748	90746	RNA5SP517	ENSG00000201594	12295	None	None
MER4B_Xq27.3d	HERV	MER4B	internal	chrX	146446783	146447878	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL109913.1	ENSG00000234748	89657	RNA5SP517	ENSG00000201594	19211	None	None
ERV316A3_Xq27.3c	HERV	ERV316A3	oneside	chrX	146501223	146505226	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP517	ENSG00000201594	73651	AL109913.1	ENSG00000234748	32309	None	None
ERV316A3_Xq27.3d	HERV	ERV316A3	oneside	chrX	146508836	146510305	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP517	ENSG00000201594	81264	AL109913.1	ENSG00000234748	27230	None	None
ERV316A3_Xq27.3e	HERV	ERV316A3	internal	chrX	146669441	146671936	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z97180.1	ENSG00000231686	48857	CXorf51B	ENSG00000235699	137835	None	None
MER4_Xq27.3j	HERV	MER4	oneside	chrX	146859403	146867722	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	Z99497.1	ENSG00000225660	87353	CXorf51A	ENSG00000224440	44677	None	None
MER4_Xq27.3k	HERV	MER4	oneside	chrX	146867764	146868917	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z99497.1	ENSG00000225660	86158	CXorf51A	ENSG00000224440	53038	None	None
MER4B_Xq27.3e	HERV	MER4B	oneside	chrX	146996210	147003550	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z99497.2	ENSG00000271660	31725	AL589669.1	ENSG00000284377	177514	None	None
ERVL_Xq27.3	HERV	ERVL	internal	chrX	147006211	147008012	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z99497.2	ENSG00000271660	41726	AL589669.1	ENSG00000284377	173052	None	None
ERVLB4_Xq27.3d	HERV	ERVLB4	oneside	chrX	147054223	147057766	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589669.1	ENSG00000284377	123298	Z99497.2	ENSG00000271660	89738	None	None
MER4_Xq27.3l	HERV	MER4	oneside	chrX	147129500	147131669	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z99497.2	ENSG00000271660	165015	AL589669.1	ENSG00000284377	49395	None	None
HERVH_Xq27.3b	HERV	HERVH	prototype	chrX	147131672	147134770	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589669.1	ENSG00000284377	46294	Z99497.2	ENSG00000271660	167187	None	None
ERVLB4_Xq27.3e	HERV	ERVLB4	oneside	chrX	147228469	147229678	+	noncoding	AL589669.1	lncRNA	SENSE	ENSG00000284377	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML5_Xq27.3	HERV	HML5	prototype	chrX	147268579	147272025	+	noncoding	AL589669.1	lncRNA	SENSE	ENSG00000284377	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
PRIMAX_Xq27.3	HERV	PRIMAX	internal	chrX	147770461	147772011	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL009048.1	ENSG00000228855	178552	AC016925.1	ENSG00000227505	28994	None	None
ERVLE_Xq27.3b	HERV	ERVLE	internal	chrX	147976664	147977985	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FMR1	ENSG00000102081	25539	FMR1NB	ENSG00000176988	3352	None	None
PRIMA41_Xq28	HERV	PRIMA41	internal	chrX	148371686	148374085	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7L1P11	ENSG00000176970	90623	U40455.1	ENSG00000233467	172808	None	None
ERV316A3_Xq28a	HERV	ERV316A3	prototype	chrX	149069085	149073375	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC231760.1	ENSG00000242186	11616	AC231656.1	ENSG00000287585	341511	None	None
HERVL18_Xq28	HERV	HERVL18	prototype	chrX	149073592	149080252	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC231760.1	ENSG00000242186	16123	AC231656.1	ENSG00000287585	334634	None	None
ERVLE_Xq28a	HERV	ERVLE	internal	chrX	149086614	149091259	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC231760.1	ENSG00000242186	29145	AC231656.1	ENSG00000287585	323627	None	None
HERVH_Xq28a	HERV	HERVH	prototype	chrX	149315606	149320415	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC231760.1	ENSG00000242186	258137	AC231656.1	ENSG00000287585	94471	None	None
ERVL_Xq28a	HERV	ERVL	internal	chrX	149352972	149355687	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC231760.1	ENSG00000242186	295503	AC231656.1	ENSG00000287585	59199	None	None
ERVL_Xq28b	HERV	ERVL	oneside	chrX	149361072	149362740	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC231760.1	ENSG00000242186	303603	AC231656.1	ENSG00000287585	52146	None	None
ERV316A3_Xq28b	HERV	ERV316A3	oneside	chrX	149523431	149524641	+	noncoding	AC244197.3,AC244197.2	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000241489,ENSG00000238039	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xq28c	HERV	ERV316A3	internal	chrX	149662317	149665467	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAGEA11	ENSG00000185247	22761	AC244197.1	ENSG00000229322	12193	None	None
HML5_Xq28a	HERV	HML5	oneside	chrX	149675591	149681132	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAGEA11	ENSG00000185247	7096	AC244197.1	ENSG00000229322	25467	None	None
HML5_Xq28b	HERV	HML5	prototype	chrX	149719916	149727680	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAGEA11	ENSG00000185247	2648	AC244098.2	ENSG00000228833	30117	None	None
ERV316A3_Xq28d	HERV	ERV316A3	internal	chrX	149737803	149740953	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAGEA11	ENSG00000185247	20535	AC244098.2	ENSG00000228833	16844	None	None
HERVL_Xq28a	HERV	HERVL	oneside	chrX	149750662	149753976	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC244098.2	ENSG00000228833	3821	MAGEA11	ENSG00000185247	33394	None	None
HERVIP10FH_Xq28	HERV	HERVIP10FH	unknown	chrX	149825009	149831569	+	coding	LINC00850	lncRNA	SENSE	ENSG00000280752	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chrX:149829917-149830199	None
HARLEQUIN_Xq28	HERV	HARLEQUIN	internal	chrX	149834195	149836615	+	noncoding	LINC00850	lncRNA	SENSE	ENSG00000280752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_Xq28	HERV	MER34B	internal	chrX	149850536	149857905	+	noncoding	LINC00850	lncRNA	SENSE	ENSG00000280752	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4_Xq28a	HERV	MER4	internal	chrX	149893773	149896952	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CXorf40B	ENSG00000197021	32575	MAGEA8	ENSG00000156009	7938	None	None
ERVLE_Xq28b	HERV	ERVLE	internal	chrX	150349971	150350670	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAMLD1	ENSG00000013619	10752	XRCC6P2	ENSG00000234825	117075	None	None
MER61_Xq28	HERV	MER61	oneside	chrX	151536299	151538768	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PASD1	ENSG00000166049	24907	BX546450.1	ENSG00000214915	20054	None	chrX:151538534-151538545,chrX:151538559-151538576
MER4_Xq28b	HERV	MER4	internal	chrX	151878970	151886674	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CNGA2	ENSG00000183862	133666	MAGEA4-AS1	ENSG00000229967	17757	None	None
ERV316A3_Xq28e	HERV	ERV316A3	internal	chrX	151944470	151945569	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAGEA4	ENSG00000147381	19300	GABRE	ENSG00000102287	7555	None	None
ERV316A3_Xq28f	HERV	ERV316A3	internal	chrX	151945757	151949205	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GABRE	ENSG00000102287	3919	MAGEA4	ENSG00000147381	20587	None	None
ERV316A3_Xq28g	HERV	ERV316A3	internal	chrX	151949288	151949825	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GABRE	ENSG00000102287	3299	MAGEA4	ENSG00000147381	24118	None	None
ERV316A3_Xq28h	HERV	ERV316A3	oneside	chrX	151950007	151951679	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAGEA4	ENSG00000147381	24837	GABRE	ENSG00000102287	1445	None	None
MER4_Xq28c	HERV	MER4	oneside	chrX	152031258	152033483	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP60	ENSG00000228965	11831	GABRE	ENSG00000102287	56578	None	None
MER4_Xq28d	HERV	MER4	internal	chrX	152036068	152037889	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP60	ENSG00000228965	7425	GABRE	ENSG00000102287	61388	None	None
MER4_Xq28e	HERV	MER4	oneside	chrX	152038125	152040818	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP60	ENSG00000228965	4496	GABRE	ENSG00000102287	63445	None	None
ERVLE_Xq28c	HERV	ERVLE	internal	chrX	152068211	152070575	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP60	ENSG00000228965	22018	MAGEA5	ENSG00000242520	44024	None	None
MER41_Xq28a	HERV	MER41	prototype	chrX	152684222	152686869	+	noncoding	AC244102.4	lncRNA	ANTISENSE	ENSG00000287394	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_Xq28b	HERV	MER41	prototype	chrX	152781609	152784254	-	noncoding	AC244102.3	lncRNA	ANTISENSE	ENSG00000286051	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_Xq28c	HERV	MER41	oneside	chrX	153010207	153014590	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC243591.1	ENSG00000234200	14195	PNMA5	ENSG00000198883	16091	None	None
ERV316A3_Xq28i	HERV	ERV316A3	oneside	chrX	153034407	153039482	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC243591.1	ENSG00000234200	4259	AC243428.1	ENSG00000229979	12668	None	None
HERVH_Xq28b	HERV	HERVH	prototype	chrX	153094556	153101476	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC152010.1	ENSG00000224931	20669	PNMA6B	ENSG00000268883	17588	None	None
ERVLB4_Xq28a	HERV	ERVLB4	internal	chrX	153190354	153191107	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAGEA1	ENSG00000198681	6474	AC236972.2	ENSG00000235219	11937	None	None
ERVLE_Xq28d	HERV	ERVLE	internal	chrX	153831913	153833018	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYCSP45	ENSG00000184844	8233	PDZD4	ENSG00000067840	1348	None	None
ERVLE_Xq28e	HERV	ERVLE	internal	chrX	154333197	154333802	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC245140.1	ENSG00000231830	158	TKTL1	ENSG00000007350	2847	None	None
HML2_Xq28a	HERV	HML2	oneside	chrX	154588662	154591282	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTAG1A	ENSG00000268651	1841	AC244090.2	ENSG00000232155	14576	None	None
HML2_Xq28b	HERV	HML2	prototype	chrX	154608423	154615762	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CTAG1B	ENSG00000184033	1847	AC244090.2	ENSG00000232155	2473	None	None
ERVLE_Xq28f	HERV	ERVLE	internal	chrX	154752057	154753704	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DKC1	ENSG00000130826	9038	GAB3	ENSG00000160219	474	chrX:154752021-154752121	None
ERVLE_Xq28g	HERV	ERVLE	internal	chrX	154757246	154758861	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAB3	ENSG00000160219	5663	DKC1	ENSG00000130826	3881	None	None
ERVLE_Xq28h	HERV	ERVLE	internal	chrX	154760989	154762137	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DKC1	ENSG00000130826	605	GAB3	ENSG00000160219	9406	None	None
MER4_Xq28f	HERV	MER4	prototype	chrX	154812532	154821960	-	coding	MPP1,HMGN1P37	protein_coding,processed_pseudogene	SENSE,SENSE	ENSG00000130830,ENSG00000229237	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Xq28b	HERV	ERVLB4	prototype	chrX	154854156	154859238	+	noncoding	F8	protein_coding	ANTISENSE	ENSG00000185010	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xq28j	HERV	ERV316A3	oneside	chrX	155004404	155006016	+	noncoding	F8	protein_coding	ANTISENSE	ENSG00000185010	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xq28k	HERV	ERV316A3	internal	chrX	155007160	155008123	+	noncoding	F8	protein_coding	ANTISENSE	ENSG00000185010	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_Xq28l	HERV	ERV316A3	internal	chrX	155145537	155146717	-	noncoding	MTCP1,BX293995.1	protein_coding,unprocessed_pseudogene	SENSE,ANTISENSE	ENSG00000214827,ENSG00000235991	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Xq28b	HERV	HERVL	oneside	chrX	155389041	155392819	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	F8A3	ENSG00000277150	64095	F8A2	ENSG00000274791	5811	None	None
ERVLE_Xq28i	HERV	ERVLE	internal	chrX	155631979	155634583	+	noncoding	TMLHE	protein_coding	ANTISENSE	ENSG00000185973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_Xq28j	HERV	ERVLE	internal	chrX	155635833	155636860	+	noncoding	TMLHE	protein_coding	ANTISENSE	ENSG00000185973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVEA_Xq28	HERV	HERVEA	prototype	chrX	155968944	155977440	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP24	ENSG00000228410	1552	VAMP7	ENSG00000124333	25175	None	None
LTR19_Yp11.2a	HERV	LTR19	prototype	chrY	1443947	1447420	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	RNU6-1334P	ENSG00000251841	1337329	None	None
HML6_Yp11.2	HERV	HML6	oneside	chrY	2885207	2887692	-	noncoding	RPS4Y1,HSFY3P	protein_coding,transcribed_unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000129824,ENSG00000227289	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV3_Yp11.2a	HERV	HERV3	prototype	chrY	3002437	3006431	+	coding	ZFY-AS1,LINC00278	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000233070,ENSG00000231535	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chrY:3003619-3003888,chrY:3004005-3004284	chrY:3002934-3002947
HERVL_Yp11.2a	HERV	HERVL	oneside	chrY	3137135	3137820	+	noncoding	LINC00278	lncRNA	SENSE	ENSG00000231535	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_Yp11.2	HERV	PABLA	internal	chrY	3184188	3188755	-	noncoding	LINC00278	lncRNA	ANTISENSE	ENSG00000231535	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Yp11.2a	HERV	ERVLB4	oneside	chrY	3203855	3208375	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AGPAT5P1	ENSG00000234652	85433	LINC00278	ENSG00000231535	3346	None	None
ERVLB4_Yp11.2b	HERV	ERVLB4	oneside	chrY	3208737	3211113	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AGPAT5P1	ENSG00000234652	82695	LINC00278	ENSG00000231535	8228	None	None
HERV3_Yp11.2b	HERV	HERV3	oneside	chrY	3235117	3243471	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AGPAT5P1	ENSG00000234652	50337	LINC00278	ENSG00000231535	34608	None	None
LTR23_Yp11.2	HERV	LTR23	internal	chrY	3368250	3369511	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AGPAT5P1	ENSG00000234652	73424	PRRC2CP1	ENSG00000216777	180141	None	None
MER4B_Yp11.2a	HERV	MER4B	oneside	chrY	3399431	3401435	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRRC2CP1	ENSG00000216777	148217	AGPAT5P1	ENSG00000234652	104605	None	None
HUERSP3_Yp11.2a	HERV	HUERSP3	prototype	chrY	3404863	3410928	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRRC2CP1	ENSG00000216777	138724	AGPAT5P1	ENSG00000234652	110037	None	None
ERVLB4_Yp11.2c	HERV	ERVLB4	internal	chrY	3425845	3427374	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AGPAT5P1	ENSG00000234652	131019	PRRC2CP1	ENSG00000216777	122278	None	None
ERVLB4_Yp11.2d	HERV	ERVLB4	oneside	chrY	3456301	3458232	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRRC2CP1	ENSG00000216777	91420	AGPAT5P1	ENSG00000234652	161475	None	None
ERVL_Yp11.2a	HERV	ERVL	oneside	chrY	3458235	3460951	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PRRC2CP1	ENSG00000216777	88701	AGPAT5P1	ENSG00000234652	163409	None	None
ERVL_Yp11.2b	HERV	ERVL	oneside	chrY	3557916	3559383	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRRC2CP1	ENSG00000216777	8106	TGIF2LY	ENSG00000176679	19658	None	None
MER4_Yp11.2a	HERV	MER4	prototype	chrY	3609027	3611056	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TGIF2LY	ENSG00000176679	28986	USP12PY	ENSG00000232927	71749	None	None
HERVFRD_Yp11.2a	HERV	HERVFRD	oneside	chrY	3631645	3636204	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TGIF2LY	ENSG00000176679	51604	USP12PY	ENSG00000232927	46601	None	None
ERVLB4_Yp11.2e	HERV	ERVLB4	internal	chrY	3642324	3643406	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TGIF2LY	ENSG00000176679	62283	USP12PY	ENSG00000232927	39399	None	None
ERVLB4_Yp11.2f	HERV	ERVLB4	oneside	chrY	3650793	3651810	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TGIF2LY	ENSG00000176679	70752	USP12PY	ENSG00000232927	30995	None	None
MER41_Yp11.2a	HERV	MER41	internal	chrY	3747337	3748680	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNF19BPY	ENSG00000225653	29317	USP12PY	ENSG00000232927	63469	None	None
ERVL_Yp11.2c	HERV	ERVL	prototype	chrY	3771321	3774878	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNF19BPY	ENSG00000225653	3119	USP12PY	ENSG00000232927	87453	None	None
LTR46_Yp11.2	HERV	LTR46	prototype	chrY	3784727	3792809	-	noncoding	AC012078.2	lncRNA	ANTISENSE	ENSG00000286050	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_Yp11.2b	HERV	HERVFRD	oneside	chrY	3850242	3853249	-	noncoding	AC012078.2,AC012078.1	lncRNA,processed_pseudogene	ANTISENSE,SENSE	ENSG00000286050,ENSG00000218410	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_Yp11.2c	HERV	HERVFRD	oneside	chrY	3853449	3860124	-	noncoding	AC012078.2	lncRNA	ANTISENSE	ENSG00000286050	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Yp11.2b	HERV	MER4	oneside	chrY	3860183	3867414	+	noncoding	AC012078.2,UBE2V1P3	lncRNA,processed_pseudogene	SENSE,ANTISENSE	ENSG00000286050,ENSG00000229518	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER4B_Yp11.2b	HERV	MER4B	oneside	chrY	3873293	3875648	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010737.1	ENSG00000229308	160849	UBE2V1P3	ENSG00000229518	6571	None	None
MER4B_Yp11.2c	HERV	MER4B	internal	chrY	3876393	3880951	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010737.1	ENSG00000229308	155546	UBE2V1P3	ENSG00000229518	9671	None	None
ERVLB4_Yp11.2g	HERV	ERVLB4	prototype	chrY	3954998	3958956	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010737.1	ENSG00000229308	77541	UBE2V1P3	ENSG00000229518	88276	None	None
ERVLE_Yp11.2a	HERV	ERVLE	internal	chrY	3976274	3977051	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010737.1	ENSG00000229308	59446	UBE2V1P3	ENSG00000229518	109552	None	None
MER4_Yp11.2c	HERV	MER4	oneside	chrY	3997018	3999085	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010737.1	ENSG00000229308	37412	UBE2V1P3	ENSG00000229518	130296	None	None
MER4_Yp11.2d	HERV	MER4	oneside	chrY	4005876	4009681	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010737.1	ENSG00000229308	26816	UBE2V1P3	ENSG00000229518	139154	None	None
HERVFRD_Yp11.2d	HERV	HERVFRD	prototype	chrY	4009683	4016459	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010737.1	ENSG00000229308	20038	UBE2V1P3	ENSG00000229518	142961	None	None
ERVLB4_Yp11.2h	HERV	ERVLB4	oneside	chrY	4056017	4058487	-	noncoding	AC010737.1	lncRNA	ANTISENSE	ENSG00000229308	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Yp11.2i	HERV	ERVLB4	oneside	chrY	4064594	4068257	-	noncoding	AC010737.1	lncRNA	ANTISENSE	ENSG00000229308	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Yp11.2e	HERV	MER4	oneside	chrY	4100562	4102089	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010737.1	ENSG00000229308	242	RNU6-303P	ENSG00000252900	72896	None	None
MER4_Yp11.2f	HERV	MER4	oneside	chrY	4102110	4108152	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010737.1	ENSG00000229308	1790	RNU6-303P	ENSG00000252900	66833	None	None
MER41_Yp11.2b	HERV	MER41	internal	chrY	4144396	4149335	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-303P	ENSG00000252900	25650	AC010737.1	ENSG00000229308	44076	None	None
HERVFRD_Yp11.2e	HERV	HERVFRD	oneside	chrY	4152667	4154650	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-303P	ENSG00000252900	20335	AC010737.1	ENSG00000229308	52347	None	None
HERVL_Yp11.2b	HERV	HERVL	prototype	chrY	4208290	4214955	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-303P	ENSG00000252900	33200	SERBP1P2	ENSG00000225878	586730	None	None
HERVL_Yp11.2c	HERV	HERVL	prototype	chrY	4276231	4281875	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERBP1P2	ENSG00000225878	519810	RNU6-303P	ENSG00000252900	101141	None	None
HERVH_Yp11.2a	HERV	HERVH	prototype	chrY	4355393	4361230	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERBP1P2	ENSG00000225878	440455	RNU6-303P	ENSG00000252900	180303	None	None
MER4_Yp11.2g	HERV	MER4	prototype	chrY	4520258	4524770	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-303P	ENSG00000252900	345168	SERBP1P2	ENSG00000225878	276915	None	None
MER4B_Yp11.2d	HERV	MER4B	oneside	chrY	4576017	4580506	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-303P	ENSG00000252900	400927	SERBP1P2	ENSG00000225878	221179	None	None
MER4_Yp11.2h	HERV	MER4	oneside	chrY	4580507	4581726	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERBP1P2	ENSG00000225878	219959	RNU6-303P	ENSG00000252900	405417	None	None
MER4B_Yp11.2e	HERV	MER4B	oneside	chrY	4880604	4882829	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERBP1P2	ENSG00000225878	77756	AC010722.1	ENSG00000277930	111029	None	None
HERVL_Yp11.2d	HERV	HERVL	oneside	chrY	5121128	5122698	-	noncoding	PCDH11Y	protein_coding	ANTISENSE	ENSG00000099715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_Yp11.2b	HERV	HERVH	prototype	chrY	5324787	5330427	-	noncoding	PCDH11Y	protein_coding	ANTISENSE	ENSG00000099715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV4_Yp11.2	HERV	HERV4	internal	chrY	5808988	5810636	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUSC2P1	ENSG00000285470	76868	RPL26P37	ENSG00000235175	15251	None	None
HERVL_Yp11.2e	HERV	HERVL	prototype	chrY	5844038	5850550	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL26P37	ENSG00000235175	50301	TUSC2P1	ENSG00000285470	36954	None	None
HERVH_Yp11.2c	HERV	HERVH	prototype	chrY	5941111	5946036	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUSC2P1	ENSG00000285470	52371	DLGAP5P1	ENSG00000237195	212766	None	None
HERVH_Yp11.2d	HERV	HERVH	prototype	chrY	6139215	6144893	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUSC2P1	ENSG00000285470	250475	DLGAP5P1	ENSG00000237195	13909	None	None
HERVE_Yp11.2a	HERV	HERVE	oneside	chrY	6385520	6389973	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00280	ENSG00000229643	15599	TTTY1B	ENSG00000129816	458	None	None
MER61_Yp11.2a	HERV	MER61	prototype	chrY	6600213	6605981	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SRIP3	ENSG00000224953	112981	TSPY17P	ENSG00000232620	79284	None	None
ERVLE_Yp11.2b	HERV	ERVLE	internal	chrY	6673957	6676885	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SRIP3	ENSG00000224953	42077	TSPY17P	ENSG00000232620	153028	None	None
ERVLB4_Yp11.2j	HERV	ERVLB4	internal	chrY	6691108	6692661	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SRIP3	ENSG00000224953	26301	TSPY17P	ENSG00000232620	170179	None	None
ERVLE_Yp11.2c	HERV	ERVLE	internal	chrY	6719538	6721162	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SRIP3	ENSG00000224953	358	AC013412.1	ENSG00000274365	67991	None	None
HERVIP10FH_Yp11.2a	HERV	HERVIP10FH	oneside	chrY	6782164	6786576	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SRIP3	ENSG00000224953	62984	AC013412.1	ENSG00000274365	2577	None	None
HERVS71_Yp11.2a	HERV	HERVS71	oneside	chrY	6890827	6895586	+	noncoding	AMELY	protein_coding	ANTISENSE	ENSG00000099721	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_Yp11.2f	HERV	HERVL	oneside	chrY	6901608	6905429	-	noncoding	AMELY	protein_coding	SENSE	ENSG00000099721	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_Yp11.2a	HERV	HERVIP10F	internal	chrY	6955997	6958398	+	noncoding	TBL1Y	protein_coding	SENSE	ENSG00000092377	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_Yp11.2	HERV	HML2	oneside	chrY	6958400	6965343	-	noncoding	TBL1Y	protein_coding	ANTISENSE	ENSG00000092377	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_Yp11.2b	HERV	HERVIP10FH	prototype	chrY	7056769	7063743	-	noncoding	TBL1Y	protein_coding	ANTISENSE	ENSG00000092377	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_Yp11.2c	HERV	HERVIP10FH	oneside	chrY	7107675	7110614	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GPR143P	ENSG00000232583	1173	PRKY	ENSG00000099725	163358	None	None
HERV9_Yp11.2a	HERV	HERV9	prototype	chrY	7169768	7177777	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GPR143P	ENSG00000232583	63266	PRKY	ENSG00000099725	96195	None	None
HERVIP10F_Yp11.2b	HERV	HERVIP10F	oneside	chrY	7177778	7181020	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRKY	ENSG00000099725	92952	GPR143P	ENSG00000232583	71276	None	None
HERV3_Yp11.2c	HERV	HERV3	internal	chrY	7196962	7204420	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GPR143P	ENSG00000232583	90460	PRKY	ENSG00000099725	69552	None	None
HERV9_Yp11.2b	HERV	HERV9	oneside	chrY	7385492	7390151	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-521P	ENSG00000252472	32903	PRKY	ENSG00000099725	3944	None	None
HERVH_Yp11.2e	HERV	HERVH	prototype	chrY	7500590	7507138	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-521P	ENSG00000252472	77432	AC007274.3	ENSG00000275280	149830	None	chrY:7503004-7503048
LTR19_Yp11.2b	HERV	LTR19	prototype	chrY	7601805	7606974	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007274.3	ENSG00000275280	49994	RNU6-521P	ENSG00000252472	178647	None	None
LTR25_Yp11.2a	HERV	LTR25	internal	chrY	7602924	7604412	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007274.3	ENSG00000275280	52556	RNU6-521P	ENSG00000252472	179766	None	None
HML5_Yp11.2a	HERV	HML5	oneside	chrY	7618700	7628211	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC007274.3	ENSG00000275280	28757	RNU6-521P	ENSG00000252472	195542	None	None
HERVS71_Yp11.2b	HERV	HERVS71	prototype	chrY	7830919	7841079	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TTTY12	ENSG00000237048	20236	AC007275.1	ENSG00000278854	4406	None	None
HML5_Yp11.2b	HERV	HML5	prototype	chrY	7863557	7867768	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010678.1	ENSG00000273863	37768	ZNF92P1Y	ENSG00000215603	8681	None	None
HERVW_Yp11.2	HERV	HERVW	prototype	chrY	7886024	7892639	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010678.1	ENSG00000273863	12897	ZNF92P1Y	ENSG00000215603	31148	None	chrY:7886978-7886981
MER61_Yp11.2b	HERV	MER61	prototype	chrY	7893624	7899441	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF92P1Y	ENSG00000215603	38748	AC010678.1	ENSG00000273863	6095	None	None
HERVK11D_Yp11.2	HERV	HERVK11D	prototype	chrY	7952561	7961871	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF736P7Y	ENSG00000241200	29116	BPY2DP	ENSG00000229745	14921	None	None
MER61_Yp11.2c	HERV	MER61	internal	chrY	7980657	7983445	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BPY2DP	ENSG00000229745	43017	ZNF736P7Y	ENSG00000241200	7542	None	None
HERVK11_Yp11.2	HERV	HERVK11	prototype	chrY	7991901	7998823	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF736P9Y	ENSG00000239893	69622	ZNF736P7Y	ENSG00000241200	95	None	None
MER61_Yp11.2d	HERV	MER61	oneside	chrY	8104089	8106411	+	noncoding	ZNF736P9Y	transcribed_processed_pseudogene	ANTISENSE	ENSG00000239893	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK14C_Yp11.2a	HERV	HERVK14C	prototype	chrY	8121822	8126768	-	noncoding	ZNF736P9Y	transcribed_processed_pseudogene	SENSE	ENSG00000239893	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrY:8126232-8126251
LTR19_Yp11.2c	HERV	LTR19	oneside	chrY	8173239	8175231	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBMY2KP	ENSG00000225809	89218	RBMY2JP	ENSG00000227204	29036	None	None
LTR25_Yp11.2b	HERV	LTR25	internal	chrY	8176719	8177656	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBMY2KP	ENSG00000225809	86793	RBMY2JP	ENSG00000227204	32516	None	None
LTR19_Yp11.2d	HERV	LTR19	oneside	chrY	8179162	8181149	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBMY2KP	ENSG00000225809	83300	RBMY2JP	ENSG00000227204	34959	None	None
HML5_Yp11.2c	HERV	HML5	internal	chrY	8201318	8204061	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBMY2KP	ENSG00000225809	60388	RBMY2JP	ENSG00000227204	57115	None	None
MER61_Yp11.2e	HERV	MER61	oneside	chrY	8304345	8305624	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF736P6Y	ENSG00000224634	45307	TSPY24P	ENSG00000215601	22136	None	None
MER61_Yp11.2f	HERV	MER61	prototype	chrY	8399573	8404632	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTND2P3	ENSG00000234850	26863	TRIM60P3Y	ENSG00000227830	8405	None	None
MER61_Yp11.2g	HERV	MER61	internal	chrY	8487649	8488501	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016991.1	ENSG00000275866	28863	ZNF736P10Y	ENSG00000216824	67749	None	None
HERVEA_Yp11.2a	HERV	HERVEA	prototype	chrY	8535703	8545263	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC016991.1	ENSG00000275866	17955	AC064829.1	ENSG00000286217	5255	None	None
HERVEA_Yp11.2b	HERV	HERVEA	prototype	chrY	8646217	8652932	+	noncoding	AC064829.1	lncRNA	SENSE	ENSG00000286217	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVE_Yp11.2b	HERV	HERVE	prototype	chrY	8712558	8718545	+	noncoding	AC064829.1	lncRNA	SENSE	ENSG00000286217	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVEA_Yp11.2c	HERV	HERVEA	prototype	chrY	8802999	8811720	+	coding	TTTY11	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000180910	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_Yp11.2c	HERV	HERV9	oneside	chrY	8829312	8832109	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTTY11	ENSG00000180910	11930	AC007967.2	ENSG00000228207	69094	None	None
HERVE_Yp11.2c	HERV	HERVE	prototype	chrY	8862721	8871459	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TTTY11	ENSG00000180910	45339	AC007967.2	ENSG00000228207	29744	None	None
HERV9_Yp11.2d	HERV	HERV9	prototype	chrY	8979971	8989102	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007967.3	ENSG00000230025	5876	OFD1P3Y	ENSG00000231988	41492	None	None
HERVE_Yp11.2d	HERV	HERVE	internal	chrY	8991802	8992963	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007967.3	ENSG00000230025	17707	OFD1P3Y	ENSG00000231988	37631	None	None
HERVK14C_Yp11.2b	HERV	HERVK14C	oneside	chrY	8996063	9000785	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007967.3	ENSG00000230025	21968	OFD1P3Y	ENSG00000231988	29809	None	None
HERV9_Yp11.2e	HERV	HERV9	oneside	chrY	9042994	9046913	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P3Y	ENSG00000231988	3006	CDY3P	ENSG00000232235	119172	None	None
HML5_Yp11.2d	HERV	HML5	prototype	chrY	9116372	9119920	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY3P	ENSG00000232235	46165	OFD1P3Y	ENSG00000231988	76384	None	None
LTR25_Yp11.2c	HERV	LTR25	internal	chrY	9125052	9126374	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P3Y	ENSG00000231988	85064	CDY3P	ENSG00000232235	39711	None	None
HUERSP3_Yp11.2b	HERV	HUERSP3	internal	chrY	9127236	9129184	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY3P	ENSG00000232235	36901	OFD1P3Y	ENSG00000231988	87248	None	None
LTR25_Yp11.2d	HERV	LTR25	unknown	chrY	9132631	9141443	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P3Y	ENSG00000231988	92643	CDY3P	ENSG00000232235	24642	None	None
LTR25_Yp11.2e	HERV	LTR25	internal	chrY	9141962	9142707	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY3P	ENSG00000232235	23378	OFD1P3Y	ENSG00000231988	101974	None	None
LTR25_Yp11.2f	HERV	LTR25	internal	chrY	9142771	9145263	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY3P	ENSG00000232235	20822	OFD1P3Y	ENSG00000231988	102783	None	None
HML3_Yp11.2a	HERV	HML3	oneside	chrY	9145264	9150314	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY3P	ENSG00000232235	15771	OFD1P3Y	ENSG00000231988	105276	None	None
LTR25_Yp11.2g	HERV	LTR25	internal	chrY	9151328	9153501	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY3P	ENSG00000232235	12584	OFD1P3Y	ENSG00000231988	111340	None	None
LTR25_Yp11.2h	HERV	LTR25	oneside	chrY	9153504	9156214	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P3Y	ENSG00000231988	113516	CDY3P	ENSG00000232235	9871	None	None
LTR25_Yp11.2i	HERV	LTR25	internal	chrY	9156485	9157874	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P3Y	ENSG00000231988	116497	CDY3P	ENSG00000232235	8211	None	None
LTR25_Yp11.2j	HERV	LTR25	oneside	chrY	9157920	9161260	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY3P	ENSG00000232235	4825	OFD1P3Y	ENSG00000231988	117932	None	None
HERVL_Yp11.2g	HERV	HERVL	prototype	chrY	9174656	9181286	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	USP9YP22	ENSG00000224408	2408	CDY3P	ENSG00000232235	6954	None	None
HML5_Yp11.2e	HERV	HML5	prototype	chrY	9207854	9216516	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP4	ENSG00000232924	14399	USP9YP4	ENSG00000238154	3243	None	None
ERVL_Yp11.2d	HERV	ERVL	internal	chrY	9216517	9220487	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	USP9YP4	ENSG00000238154	11906	ELOCP4	ENSG00000232924	10428	None	None
HML3_Yp11.2b	HERV	HML3	prototype	chrY	9238048	9245090	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP4	ENSG00000232924	6801	RBMY1A3P	ENSG00000197038	66040	None	None
HERVK14C_Yp11.2c	HERV	HERVK14C	prototype	chrY	9273708	9279128	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RBMY1A3P	ENSG00000197038	32002	ELOCP4	ENSG00000232924	42461	None	None
HERVE_Yp11.2e	HERV	HERVE	prototype	chrY	9280408	9289007	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBMY1A3P	ENSG00000197038	22123	ELOCP4	ENSG00000232924	49161	None	None
HERVE_Yp11.2f	HERV	HERVE	oneside	chrY	9774747	9779201	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTTY22	ENSG00000224075	5171	TTTY1	ENSG00000129845	458	None	None
HML5_Yp11.2f	HERV	HML5	oneside	chrY	9973838	9981144	+	noncoding	RBMY2QP	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000236718	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_Yp11.2e	HERV	LTR19	oneside	chrY	9993374	9995460	+	noncoding	RBMY2QP	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000236718	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_Yp11.2f	HERV	HERVH	prototype	chrY	10047168	10053754	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TSPY5P	ENSG00000225685	12800	TSPY20P	ENSG00000243643	8793	None	None
PRIMA41_Yp11.2	HERV	PRIMA41	internal	chrY	10124241	10130290	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP519	ENSG00000252289	31248	DUX4L31	ENSG00000231411	41300	None	None
HML3_Yq11.21	HERV	HML3	oneside	chrY	11235711	11239522	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DUX4L16	ENSG00000258567	67396	AC134878.2	ENSG00000278212	20685	None	None
HML1_Yq11.21a	HERV	HML1	oneside	chrY	11239523	11241581	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DUX4L16	ENSG00000258567	65337	AC134878.2	ENSG00000278212	24497	None	None
HERVL_Yq11.21	HERV	HERVL	prototype	chrY	11468744	11472783	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC134879.2	ENSG00000271375	944	AC134879.1	ENSG00000224567	22643	None	None
HERVH_Yq11.21	HERV	HERVH	prototype	chrY	11888488	11896674	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ASS1P6	ENSG00000215583	25862	RCC2P1	ENSG00000234385	105961	None	None
HARLEQUIN_Yq11.21	HERV	HARLEQUIN	prototype	chrY	12146699	12153814	-	noncoding	GYG2P1	transcribed_unprocessed_pseudogene	SENSE	ENSG00000206159	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVEA_Yq11.21	HERV	HERVEA	prototype	chrY	12245476	12252038	+	noncoding	GYG2P1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000206159	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_Yq11.21	HERV	HERV9	prototype	chrY	12260791	12267046	-	noncoding	GYG2P1	transcribed_unprocessed_pseudogene	SENSE	ENSG00000206159	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH21_Yq11.21	HERV	HERVFH21	prototype	chrY	12281617	12288137	-	coding	GYG2P1	transcribed_unprocessed_pseudogene	SENSE	ENSG00000206159	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_Yq11.21	HERV	MER4B	unknown	chrY	12296394	12306188	-	noncoding	GYG2P1	transcribed_unprocessed_pseudogene	SENSE	ENSG00000206159	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_Yq11.21b	HERV	HML1	oneside	chrY	12321453	12327775	+	noncoding	GYG2P1,FAM8A4P	transcribed_unprocessed_pseudogene,processed_pseudogene	ANTISENSE,SENSE	ENSG00000206159,ENSG00000232730	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVS71_Yq11.21	HERV	HERVS71	oneside	chrY	12354337	12361993	-	noncoding	GYG2P1,ARSDP1	transcribed_unprocessed_pseudogene,unprocessed_pseudogene	SENSE,ANTISENSE	ENSG00000206159,ENSG00000225117	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_Yq11.221	HERV	HERVIP10F	oneside	chrY	12469022	12472218	-	noncoding	XGY1	unprocessed_pseudogene	SENSE	ENSG00000227447	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVEA_Yq11.221a	HERV	HERVEA	oneside	chrY	12472219	12476798	-	noncoding	XGY1	unprocessed_pseudogene	SENSE	ENSG00000227447	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_Yq11.221a	HERV	HERVH	prototype	chrY	12559210	12565355	-	noncoding	USP9Y	protein_coding	ANTISENSE	ENSG00000114374	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chrY:12564628-12564635
HARLEQUIN_Yq11.221a	HERV	HARLEQUIN	oneside	chrY	12567039	12569571	+	noncoding	USP9Y	protein_coding	SENSE	ENSG00000114374	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_Yq11.221b	HERV	HARLEQUIN	internal	chrY	12575697	12577943	+	noncoding	USP9Y	protein_coding	SENSE	ENSG00000114374	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Yq11.221a	HERV	MER4	prototype	chrY	12588388	12590752	-	noncoding	USP9Y	protein_coding	ANTISENSE	ENSG00000114374	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH21_Yq11.221	HERV	HERVFH21	prototype	chrY	12593596	12598991	-	noncoding	USP9Y	protein_coding	ANTISENSE	ENSG00000114374	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_Yq11.221a	HERV	HERV9	prototype	chrY	12599767	12608740	-	noncoding	USP9Y	protein_coding	ANTISENSE	ENSG00000114374	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_Yq11.221a	HERV	MER4B	prototype	chrY	12668114	12677969	-	coding	USP9Y	protein_coding	ANTISENSE	ENSG00000114374	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Yq11.221b	HERV	MER4	prototype	chrY	12680864	12688304	+	noncoding	USP9Y	protein_coding	SENSE	ENSG00000114374	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
MER41_Yq11.221a	HERV	MER41	internal	chrY	12693892	12697964	-	coding	USP9Y	protein_coding	ANTISENSE	ENSG00000114374	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_Yq11.221b	HERV	MER41	internal	chrY	12698035	12698826	-	noncoding	USP9Y	protein_coding	ANTISENSE	ENSG00000114374	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_Yq11.221a	HERV	LTR25	internal	chrY	12744501	12749585	-	noncoding	USP9Y	protein_coding	ANTISENSE	ENSG00000114374	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_Yq11.221	HERV	HUERSP3	internal	chrY	12892330	12898440	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	USP9Y	ENSG00000114374	31491	DDX3Y	ENSG00000067048	5668	None	None
HUERSP2_Yq11.221	HERV	HUERSP2	prototype	chrY	12922349	12926718	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CASKP1	ENSG00000234059	3447	DDX3Y	ENSG00000067048	1871	None	None
HERVFRD_Yq11.221	HERV	HERVFRD	oneside	chrY	12966204	12969549	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SFPQP1	ENSG00000224035	114241	CASKP1	ENSG00000234059	18022	None	chrY:12967249-12967255,chrY:12967279-12967283
HERVKC4_Yq11.221	HERV	HERVKC4	prototype	chrY	12993872	13001093	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SFPQP1	ENSG00000224035	82697	CASKP1	ENSG00000234059	45690	None	None
ERVLB4_Yq11.221a	HERV	ERVLB4	internal	chrY	13049694	13055241	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CASKP1	ENSG00000234059	101512	SFPQP1	ENSG00000224035	28549	None	None
LTR19_Yq11.221a	HERV	LTR19	oneside	chrY	13067227	13069605	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CASKP1	ENSG00000234059	119045	SFPQP1	ENSG00000224035	14185	None	None
LTR19_Yq11.221b	HERV	LTR19	oneside	chrY	13098968	13100020	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TAB3P1	ENSG00000235462	53911	SFPQP1	ENSG00000224035	3163	None	None
MER4_Yq11.221c	HERV	MER4	internal	chrY	13168831	13169733	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TAB3P1	ENSG00000235462	6617	DPPA2P1	ENSG00000223915	61151	None	None
HML3_Yq11.221a	HERV	HML3	prototype	chrY	13169734	13175843	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DPPA2P1	ENSG00000223915	55041	TAB3P1	ENSG00000235462	7520	None	None
MER4_Yq11.221d	HERV	MER4	internal	chrY	13175844	13179057	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TAB3P1	ENSG00000235462	13630	DPPA2P1	ENSG00000223915	51827	None	None
HML3_Yq11.221b	HERV	HML3	prototype	chrY	13252527	13259365	+	noncoding	UTY	protein_coding	ANTISENSE	ENSG00000183878	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_Yq11.221c	HERV	HARLEQUIN	prototype	chrY	13282300	13289717	+	coding	UTY,PSMA6P1	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000183878,ENSG00000215414	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrY:13288284-13288286
MER4_Yq11.221e	HERV	MER4	prototype	chrY	13315667	13321859	+	noncoding	UTY	protein_coding	ANTISENSE	ENSG00000183878	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_Yq11.221b	HERV	LTR25	oneside	chrY	13552210	13559268	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UTY	ENSG00000183878	71537	TMSB4Y	ENSG00000154620	144631	None	None
LTR25_Yq11.221c	HERV	LTR25	oneside	chrY	13565668	13567687	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UTY	ENSG00000183878	84995	TMSB4Y	ENSG00000154620	136212	None	None
ERVLB4_Yq11.221b	HERV	ERVLB4	insert*	chrY	13578839	13582460	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UTY	ENSG00000183878	98166	TMSB4Y	ENSG00000154620	121439	None	None
HERVL_Yq11.221a	HERV	HERVL	prototype	chrY	13594554	13598482	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMSB4Y	ENSG00000154620	105417	UTY	ENSG00000183878	113881	None	None
HERVL_Yq11.221b	HERV	HERVL	oneside	chrY	13602616	13604340	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMSB4Y	ENSG00000154620	99559	UTY	ENSG00000183878	121943	None	None
HML5_Yq11.221a	HERV	HML5	prototype	chrY	13607348	13612418	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UTY	ENSG00000183878	126675	TMSB4Y	ENSG00000154620	91481	None	None
HML1_Yq11.221a	HERV	HML1	oneside	chrY	13612616	13618615	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMSB4Y	ENSG00000154620	85284	UTY	ENSG00000183878	131943	None	None
MER4B_Yq11.221b	HERV	MER4B	prototype	chrY	13624238	13627352	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UTY	ENSG00000183878	143565	TMSB4Y	ENSG00000154620	76547	None	None
HERV9_Yq11.221b	HERV	HERV9	prototype	chrY	13627364	13637612	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UTY	ENSG00000183878	146691	TMSB4Y	ENSG00000154620	66287	None	None
HERVL32_Yq11.221	HERV	HERVL32	oneside	chrY	13653042	13654649	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMSB4Y	ENSG00000154620	49250	UTY	ENSG00000183878	172369	None	None
MER4B_Yq11.221c	HERV	MER4B	internal	chrY	13656004	13656845	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMSB4Y	ENSG00000154620	47054	UTY	ENSG00000183878	175331	None	None
HERV9_Yq11.221c	HERV	HERV9	prototype	chrY	13656847	13666238	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMSB4Y	ENSG00000154620	37661	UTY	ENSG00000183878	176174	None	None
MER4B_Yq11.221d	HERV	MER4B	internal	chrY	13666240	13670378	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMSB4Y	ENSG00000154620	33521	UTY	ENSG00000183878	185567	None	None
MER4B_Yq11.221e	HERV	MER4B	internal	chrY	13670474	13671779	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMSB4Y	ENSG00000154620	32120	UTY	ENSG00000183878	189801	None	None
HERV9_Yq11.221d	HERV	HERV9	prototype	chrY	13887679	13897994	+	noncoding	ANOS2P	transcribed_unprocessed_pseudogene	SENSE	ENSG00000241859	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV9_Yq11.221e	HERV	HERV9	prototype	chrY	14158236	14167807	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PNPLA4P1	ENSG00000235451	71636	AC010723.1	ENSG00000223517	108405	None	None
ERVLE_Yq11.221a	HERV	ERVLE	internal	chrY	14264918	14266566	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010723.1	ENSG00000223517	9646	PNPLA4P1	ENSG00000235451	178318	None	None
HERV9_Yq11.221f	HERV	HERV9	oneside	chrY	14312854	14315843	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010723.1	ENSG00000223517	35365	NLGN4Y	ENSG00000165246	206730	None	None
HERVW_Yq11.221	HERV	HERVW	internal	chrY	14341042	14344697	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NLGN4Y	ENSG00000165246	177876	AC010723.1	ENSG00000223517	63553	chrY:14340810-14341102	None
HERV9_Yq11.221g	HERV	HERV9	oneside	chrY	14350505	14355261	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NLGN4Y	ENSG00000165246	167312	AC010723.1	ENSG00000223517	73016	None	None
HERVH_Yq11.221b	HERV	HERVH	oneside	chrY	14355261	14360015	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NLGN4Y	ENSG00000165246	162558	AC010723.1	ENSG00000223517	77772	None	None
HERVK11_Yq11.221	HERV	HERVK11	oneside	chrY	14374888	14381445	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NLGN4Y	ENSG00000165246	141128	AC010723.1	ENSG00000223517	97399	None	None
HERV9_Yq11.221h	HERV	HERV9	prototype	chrY	14814104	14821742	-	noncoding	NLGN4Y	protein_coding	ANTISENSE	ENSG00000165246	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_Yq11.221b	HERV	HML5	prototype	chrY	14868523	14874954	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MED13P1	ENSG00000236131	32944	NLGN4Y	ENSG00000165246	22873	None	None
HERVL_Yq11.221c	HERV	HERVL	prototype	chrY	14975188	14981941	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PUDPP1	ENSG00000234620	366721	AC006989.1	ENSG00000224518	32473	None	None
HERV9_Yq11.221i	HERV	HERV9	prototype	chrY	14983203	14992582	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006989.1	ENSG00000224518	40488	PUDPP1	ENSG00000234620	356080	None	None
ERVLE_Yq11.221b	HERV	ERVLE	internal	chrY	15023203	15023738	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006989.1	ENSG00000224518	80488	PUDPP1	ENSG00000234620	324924	None	None
HERVH_Yq11.221c	HERV	HERVH	prototype	chrY	15098843	15103998	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PUDPP1	ENSG00000234620	244664	AC006989.1	ENSG00000224518	156128	None	None
HERVEA_Yq11.221b	HERV	HERVEA	oneside	chrY	15254704	15259982	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006989.1	ENSG00000224518	311989	PUDPP1	ENSG00000234620	88680	None	None
HERVEA_Yq11.221c	HERV	HERVEA	oneside	chrY	15268369	15270534	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006989.1	ENSG00000224518	325654	PUDPP1	ENSG00000234620	78128	None	None
HML1_Yq11.221b	HERV	HML1	prototype	chrY	15400320	15405096	+	noncoding	PUDPP1	unprocessed_pseudogene	ANTISENSE	ENSG00000234620	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_Yq11.221j	HERV	HERV9	oneside	chrY	15432532	15434541	+	noncoding	PUDPP1	unprocessed_pseudogene	ANTISENSE	ENSG00000234620	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Yq11.221f	HERV	MER4	oneside	chrY	15508950	15511930	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STSP1	ENSG00000227166	35286	PUDPP1	ENSG00000234620	52876	None	None
HERVH_Yq11.221d	HERV	HERVH	prototype	chrY	15512069	15518203	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PUDPP1	ENSG00000234620	55995	STSP1	ENSG00000227166	29013	None	None
HERV9_Yq11.221k	HERV	HERV9	internal	chrY	15771051	15772125	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STSP1	ENSG00000227166	177720	AC011749.1	ENSG00000252689	366123	None	None
HERVK11D_Yq11.221	HERV	HERVK11D	prototype	chrY	15973346	15982688	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011749.1	ENSG00000252689	155560	STSP1	ENSG00000227166	380015	None	None
LTR19_Yq11.221c	HERV	LTR19	prototype	chrY	16059283	16064617	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011749.1	ENSG00000252689	73631	STSP1	ENSG00000227166	465952	None	None
HERV9_Yq11.221l	HERV	HERV9	prototype	chrY	16071030	16080880	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	STSP1	ENSG00000227166	477699	AC011749.1	ENSG00000252689	57368	None	chrY:16071284-16071290,chrY:16080464-16080469
LTR19_Yq11.221d	HERV	LTR19	oneside	chrY	16080882	16083152	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STSP1	ENSG00000227166	487551	AC011749.1	ENSG00000252689	55096	None	None
LTR19_Yq11.221e	HERV	LTR19	prototype	chrY	16127599	16133739	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STSP1	ENSG00000227166	534268	AC011749.1	ENSG00000252689	4509	None	None
HERV30_Yq11.221a	HERV	HERV30	prototype	chrY	16163843	16173034	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-109P	ENSG00000252173	75901	AC011749.1	ENSG00000252689	25464	None	chrY:16169633-16169664
HERVS71_Yq11.221a	HERV	HERVS71	prototype	chrY	16197437	16204160	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011749.1	ENSG00000252689	59058	RNU6-109P	ENSG00000252173	44775	None	None
HERV9_Yq11.221m	HERV	HERV9	oneside	chrY	16273306	16277432	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-109P	ENSG00000252173	24265	RNU6-184P	ENSG00000252323	58851	None	None
HERVS71_Yq11.221b	HERV	HERVS71	prototype	chrY	16381183	16387906	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011751.1	ENSG00000286201	211824	RNU6-184P	ENSG00000252323	44794	None	None
HERV30_Yq11.221b	HERV	HERV30	prototype	chrY	16412314	16421503	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-184P	ENSG00000252323	75925	AC011751.1	ENSG00000286201	178227	None	None
LTR19_Yq11.221f	HERV	LTR19	internal	chrY	16575374	16576996	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011751.1	ENSG00000286201	22734	RNU6-184P	ENSG00000252323	238985	None	None
HERVL66_Yq11.221	HERV	HERVL66	oneside	chrY	16614861	16615842	+	noncoding	AC011751.1	lncRNA	ANTISENSE	ENSG00000286201	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVEA_Yq11.221d	HERV	HERVEA	prototype	chrY	16636050	16644799	-	noncoding	AC011751.1	lncRNA	SENSE	ENSG00000286201	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_Yq11.221c	HERV	HML3	oneside	chrY	16677462	16681241	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SURF6P1	ENSG00000228518	511585	AC011751.1	ENSG00000286201	32923	None	None
HML3_Yq11.221d	HERV	HML3	oneside	chrY	16681302	16682607	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SURF6P1	ENSG00000228518	510219	AC011751.1	ENSG00000286201	36763	None	None
HERVEA_Yq11.221e	HERV	HERVEA	prototype	chrY	16831361	16840581	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011751.1	ENSG00000286201	186822	SURF6P1	ENSG00000228518	352245	None	chrY:16831984-16832011
HML3_Yq11.221e	HERV	HML3	oneside	chrY	16875111	16879335	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011751.1	ENSG00000286201	230572	SURF6P1	ENSG00000228518	313491	None	None
HML4_Yq11.221	HERV	HML4	prototype	chrY	16953670	16959941	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011751.1	ENSG00000286201	309131	SURF6P1	ENSG00000228518	232885	None	None
HERVH_Yq11.222a	HERV	HERVH	oneside	chrY	17131121	17132654	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SURF6P1	ENSG00000228518	60172	AC011751.1	ENSG00000286201	486582	None	None
HERVW_Yq11.222a	HERV	HERVW	prototype	chrY	17132658	17137187	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SURF6P1	ENSG00000228518	55639	AC011751.1	ENSG00000286201	488119	None	None
HERVIP10FH_Yq11.222a	HERV	HERVIP10FH	internal	chrY	17134981	17135822	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011751.1	ENSG00000286201	490442	SURF6P1	ENSG00000228518	57004	None	None
HERVH_Yq11.222b	HERV	HERVH	oneside	chrY	17137191	17142090	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SURF6P1	ENSG00000228518	50736	AC011751.1	ENSG00000286201	492652	None	None
ERVLE_Yq11.222	HERV	ERVLE	internal	chrY	17166291	17167890	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011751.1	ENSG00000286201	521752	SURF6P1	ENSG00000228518	24936	None	None
HML6_Yq11.222a	HERV	HML6	prototype	chrY	17331572	17337113	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SURF6P1	ENSG00000228518	137920	ELOCP35	ENSG00000271595	127766	None	None
HERVFH21_Yq11.222	HERV	HERVFH21	oneside	chrY	17340894	17346933	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP35	ENSG00000271595	117946	SURF6P1	ENSG00000228518	147242	None	None
HERV9_Yq11.222a	HERV	HERV9	internal	chrY	17341591	17343057	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP35	ENSG00000271595	121822	SURF6P1	ENSG00000228518	147939	None	None
HERV9_Yq11.222b	HERV	HERV9	prototype	chrY	17347284	17354220	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP35	ENSG00000271595	110659	SURF6P1	ENSG00000228518	153632	None	None
HERVL66_Yq11.222	HERV	HERVL66	oneside	chrY	17402049	17404891	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SURF6P1	ENSG00000228518	208397	ELOCP35	ENSG00000271595	59988	None	None
HUERSP1_Yq11.222a	HERV	HUERSP1	oneside	chrY	17412390	17418914	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SURF6P1	ENSG00000228518	218738	ELOCP35	ENSG00000271595	45965	None	None
HERV30_Yq11.222	HERV	HERV30	prototype	chrY	17418915	17424491	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP35	ENSG00000271595	40388	SURF6P1	ENSG00000228518	225263	None	None
HUERSP1_Yq11.222b	HERV	HUERSP1	oneside	chrY	17424492	17426742	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SURF6P1	ENSG00000228518	230840	ELOCP35	ENSG00000271595	38137	None	None
HML6_Yq11.222b	HERV	HML6	oneside	chrY	17474865	17476808	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM41AY1	ENSG00000224989	24150	ELOCP35	ENSG00000271595	9651	None	None
LTR25_Yq11.222a	HERV	LTR25	internal	chrY	17476905	17477776	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM41AY1	ENSG00000224989	23182	ELOCP35	ENSG00000271595	11691	None	None
PRIMA41_Yq11.222a	HERV	PRIMA41	internal	chrY	17519602	17524241	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM224B	ENSG00000230663	28559	TUBB1P2	ENSG00000228578	564	None	None
HERVFC1_Yq11.222a	HERV	HERVFC1	prototype	chrY	17609729	17614986	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM224B	ENSG00000230663	29975	CLUHP1	ENSG00000238191	6273	None	None
HERVK14C_Yq11.222a	HERV	HERVK14C	oneside	chrY	17669825	17671789	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007742.2	ENSG00000275578	34179	TAF9P1	ENSG00000226353	40423	None	None
HERVK11_Yq11.222a	HERV	HERVK11	oneside	chrY	17684517	17688174	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TAF9P1	ENSG00000226353	55115	AC007742.2	ENSG00000275578	17794	None	None
HML6_Yq11.222c	HERV	HML6	oneside	chrY	17846449	17851138	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY2B	ENSG00000129873	26272	ELOCP6	ENSG00000225740	8921	None	None
LTR25_Yq11.222b	HERV	LTR25	internal	chrY	17852000	17853308	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY2B	ENSG00000129873	24102	ELOCP6	ENSG00000225740	14472	None	None
HUERSP3_Yq11.222a	HERV	HUERSP3	internal	chrY	17855203	17856850	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP6	ENSG00000225740	17675	CDY2B	ENSG00000129873	20560	None	None
LTR25_Yq11.222c	HERV	LTR25	oneside	chrY	17856852	17860460	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY2B	ENSG00000129873	16950	ELOCP6	ENSG00000225740	19324	None	None
LTR25_Yq11.222d	HERV	LTR25	unknown	chrY	17860473	17872087	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP6	ENSG00000225740	22945	CDY2B	ENSG00000129873	5323	None	None
LTR25_Yq11.222e	HERV	LTR25	oneside	chrY	17872091	17875800	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CDY2B	ENSG00000129873	1610	ELOCP6	ENSG00000225740	34563	None	None
HERVL_Yq11.222a	HERV	HERVL	prototype	chrY	17900890	17905603	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	USP9YP7	ENSG00000224485	3152	CDY6P	ENSG00000229138	17182	None	None
HERVL_Yq11.222b	HERV	HERVL	oneside	chrY	17924142	17929454	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	USP9YP6	ENSG00000226116	2512	CDY7P	ENSG00000237558	22135	None	None
HML6_Yq11.222d	HERV	HML6	oneside	chrY	17939128	17943709	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY7P	ENSG00000237558	7880	USP9YP6	ENSG00000226116	17498	None	None
HML6_Yq11.222e	HERV	HML6	oneside	chrY	17962269	17966850	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY7P	ENSG00000237558	8769	USP9YP34	ENSG00000233378	17499	None	None
HERVL_Yq11.222c	HERV	HERVL	oneside	chrY	17976525	17981837	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	USP9YP34	ENSG00000233378	2512	CDY7P	ENSG00000237558	23025	None	None
HERVL_Yq11.222d	HERV	HERVL	prototype	chrY	18000404	18005117	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	USP9YP32	ENSG00000237616	3152	CDY8P	ENSG00000224033	17182	None	None
LTR25_Yq11.222f	HERV	LTR25	oneside	chrY	18030207	18033917	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY2A	ENSG00000182415	1610	ELOCP12	ENSG00000230412	34566	None	None
LTR25_Yq11.222g	HERV	LTR25	unknown	chrY	18033921	18045535	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP12	ENSG00000230412	22948	CDY2A	ENSG00000182415	5324	None	None
LTR25_Yq11.222h	HERV	LTR25	oneside	chrY	18045548	18049156	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY2A	ENSG00000182415	16951	ELOCP12	ENSG00000230412	19327	None	None
HUERSP3_Yq11.222b	HERV	HUERSP3	internal	chrY	18049158	18050796	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP12	ENSG00000230412	17687	CDY2A	ENSG00000182415	20561	None	None
LTR25_Yq11.222i	HERV	LTR25	internal	chrY	18052703	18054001	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY2A	ENSG00000182415	24106	ELOCP12	ENSG00000230412	14482	None	None
HML6_Yq11.222f	HERV	HML6	oneside	chrY	18054873	18059562	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY2A	ENSG00000182415	26276	ELOCP12	ENSG00000230412	8921	None	None
HERVK11_Yq11.222b	HERV	HERVK11	oneside	chrY	18217840	18221497	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TAF9P2	ENSG00000229302	55110	CDY9P	ENSG00000232899	33426	None	None
HERVK14C_Yq11.222b	HERV	HERVK14C	oneside	chrY	18234225	18236189	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY9P	ENSG00000232899	49811	TAF9P2	ENSG00000229302	40418	None	None
HERVFC1_Yq11.222b	HERV	HERVFC1	prototype	chrY	18291022	18296280	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM224A	ENSG00000233522	29973	CLUHP2	ENSG00000228945	6261	None	None
PRIMA41_Yq11.222b	HERV	PRIMA41	internal	chrY	18381370	18386841	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM224A	ENSG00000233522	28160	TUBB1P1	ENSG00000249726	133	None	None
LTR25_Yq11.222j	HERV	LTR25	internal	chrY	18428231	18429102	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM41AY2	ENSG00000226362	23185	ELOCP13	ENSG00000225716	11695	None	None
HML6_Yq11.222g	HERV	HML6	oneside	chrY	18429199	18431142	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM41AY2	ENSG00000226362	24153	ELOCP13	ENSG00000225716	9655	None	None
LTR19_Yq11.222a	HERV	LTR19	oneside	chrY	18479425	18480456	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	USP9YP14	ENSG00000227494	631	OFD1P4Y	ENSG00000229406	7288	None	None
HML3_Yq11.222a	HERV	HML3	prototype	chrY	18555882	18559537	-	noncoding	HSFY1	protein_coding	ANTISENSE	ENSG00000172468	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_Yq11.222a	HERV	HERV3	oneside	chrY	18566558	18568299	-	noncoding	HSFY1	protein_coding	ANTISENSE	ENSG00000172468	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_Yq11.222b	HERV	HERV3	internal	chrY	18568411	18575269	-	noncoding	HSFY1	protein_coding	ANTISENSE	ENSG00000172468	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_Yq11.222c	HERV	HERV3	prototype	chrY	18589478	18598213	-	noncoding	TTTY9B,OFD1P5Y	lncRNA,unprocessed_pseudogene	SENSE,SENSE	ENSG00000131007,ENSG00000240438	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_Yq11.222a	HERV	HUERSP3B	oneside	chrY	18614902	18620654	+	noncoding	OFD1P5Y	unprocessed_pseudogene	ANTISENSE	ENSG00000240438	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chrY:18615336-18615342
HERVK14C_Yq11.222c	HERV	HERVK14C	prototype	chrY	18622526	18626968	-	noncoding	OFD1P5Y	unprocessed_pseudogene	SENSE	ENSG00000240438	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_Yq11.222b	HERV	HUERSP3B	prototype	chrY	18629650	18638105	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P5Y	ENSG00000240438	573	RAB9AP4	ENSG00000235479	11566	None	chrY:18630088-18630099
HERVK14C_Yq11.222d	HERV	HERVK14C	prototype	chrY	18666469	18672374	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRAPPC2P7	ENSG00000249606	10279	OFD1P6Y	ENSG00000242153	1659	None	None
HUERSP3B_Yq11.222c	HERV	HUERSP3B	internal	chrY	18684006	18688726	-	noncoding	OFD1P6Y	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000242153	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_Yq11.222d	HERV	HUERSP3B	oneside	chrY	18688833	18690750	-	noncoding	OFD1P6Y	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000242153	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK14C_Yq11.222e	HERV	HERVK14C	prototype	chrY	18693432	18697874	+	noncoding	OFD1P6Y	transcribed_unprocessed_pseudogene	SENSE	ENSG00000242153	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3B_Yq11.222e	HERV	HUERSP3B	oneside	chrY	18699746	18705500	-	noncoding	OFD1P6Y	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000242153	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chrY:18705198-18705235
HERV3_Yq11.222d	HERV	HERV3	prototype	chrY	18722189	18730925	+	noncoding	OFD1P6Y	transcribed_unprocessed_pseudogene	SENSE	ENSG00000242153	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERV3_Yq11.222e	HERV	HERV3	oneside	chrY	18745134	18753845	+	noncoding	HSFY2	protein_coding	ANTISENSE	ENSG00000169953	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_Yq11.222b	HERV	HML3	prototype	chrY	18760865	18764520	+	noncoding	HSFY2	protein_coding	ANTISENSE	ENSG00000169953	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_Yq11.222b	HERV	LTR19	oneside	chrY	18839944	18840975	+	noncoding	TTTY14	lncRNA	ANTISENSE	ENSG00000176728	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVH_Yq11.222c	HERV	HERVH	oneside	chrY	18944924	18948358	-	noncoding	TTTY14	lncRNA	SENSE	ENSG00000176728	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_Yq11.222b	HERV	HERVIP10FH	oneside	chrY	19039202	19042102	-	noncoding	TTTY14	lncRNA	SENSE	ENSG00000176728	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HERVW_Yq11.222b	HERV	HERVW	prototype	chrY	19079938	19087497	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTTY14	ENSG00000176728	2375	AC010133.1	ENSG00000274282	166463	None	None
HERV9_Yq11.222c	HERV	HERV9	oneside	chrY	19100345	19106643	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010133.1	ENSG00000274282	147317	TTTY14	ENSG00000176728	22782	None	None
HERV9_Yq11.222d	HERV	HERV9	internal	chrY	19106673	19108332	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010133.1	ENSG00000274282	145628	TTTY14	ENSG00000176728	29110	None	None
HERV9_Yq11.222e	HERV	HERV9	prototype	chrY	19131609	19140818	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTTY14	ENSG00000176728	54046	AC010133.1	ENSG00000274282	113142	None	None
HERVIP10F_Yq11.222	HERV	HERVIP10F	oneside	chrY	19140819	19143790	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTTY14	ENSG00000176728	63256	AC010133.1	ENSG00000274282	110170	None	None
HUERSP2_Yq11.222	HERV	HUERSP2	oneside	chrY	19233120	19235385	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTTY14	ENSG00000176728	155557	AC010133.1	ENSG00000274282	18575	None	None
HERVFRD_Yq11.222a	HERV	HERVFRD	internal	chrY	19261641	19262747	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP19	ENSG00000234529	64822	AC010133.1	ENSG00000274282	766	None	None
MER41_Yq11.222	HERV	MER41	internal	chrY	19263020	19263861	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP19	ENSG00000234529	63708	AC010133.1	ENSG00000274282	2145	None	None
HERVFRD_Yq11.222b	HERV	HERVFRD	oneside	chrY	19270628	19272535	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010133.1	ENSG00000274282	9753	GAPDHP19	ENSG00000234529	55034	None	None
PRIMA4_Yq11.222a	HERV	PRIMA4	oneside	chrY	19288997	19292129	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP19	ENSG00000234529	35440	AC010133.1	ENSG00000274282	28122	None	None
PRIMA4_Yq11.222b	HERV	PRIMA4	internal	chrY	19292224	19293198	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP19	ENSG00000234529	34371	AC010133.1	ENSG00000274282	31349	None	None
HML3_Yq11.222c	HERV	HML3	prototype	chrY	19293251	19298279	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010133.1	ENSG00000274282	32376	GAPDHP19	ENSG00000234529	29290	None	None
PRIMA4_Yq11.222c	HERV	PRIMA4	oneside	chrY	19298281	19300467	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP19	ENSG00000234529	27102	AC010133.1	ENSG00000274282	37406	None	None
LTR25_Yq11.222k	HERV	LTR25	prototype	chrY	19317305	19323420	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010133.1	ENSG00000274282	56430	GAPDHP19	ENSG00000234529	4149	None	None
HERVH_Yq11.222d	HERV	HERVH	oneside	chrY	19419025	19427738	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP19	ENSG00000234529	90452	BCORP1	ENSG00000215580	27693	None	chrY:19427635-19427636
HUERSP3_Yq11.222c	HERV	HUERSP3	prototype	chrY	19428063	19434295	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BCORP1	ENSG00000215580	21136	GAPDHP19	ENSG00000234529	99490	None	None
PABLA_Yq11.222	HERV	PABLA	prototype	chrY	19444132	19446723	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP19	ENSG00000234529	115559	BCORP1	ENSG00000215580	8708	None	None
HERVI_Yq11.222	HERV	HERVI	oneside	chrY	19447126	19449030	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP19	ENSG00000234529	118553	BCORP1	ENSG00000215580	6401	None	None
HUERSP1_Yq11.222c	HERV	HUERSP1	internal	chrY	19452523	19453607	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP19	ENSG00000234529	123950	BCORP1	ENSG00000215580	1824	None	None
HML3_Yq11.223a	HERV	HML3	oneside	chrY	19656546	19660306	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010889.1	ENSG00000260197	31635	TXLNGY	ENSG00000131002	50272	None	None
HERVIP10F_Yq11.223	HERV	HERVIP10F	prototype	chrY	19809366	19817999	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009233.1	ENSG00000274837	114131	AC010889.2	ENSG00000288049	49388	None	None
LTR25_Yq11.223a	HERV	LTR25	internal	chrY	19830872	19834053	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009233.1	ENSG00000274837	98077	AC010889.2	ENSG00000288049	70894	None	None
LTR25_Yq11.223b	HERV	LTR25	internal	chrY	19840244	19844550	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009233.1	ENSG00000274837	87580	AC010889.2	ENSG00000288049	80266	None	None
HML5_Yq11.223a	HERV	HML5	prototype	chrY	19868522	19873642	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010889.2	ENSG00000288049	108544	AC009233.1	ENSG00000274837	58488	None	None
HERV30_Yq11.223	HERV	HERV30	prototype	chrY	19913676	19919529	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009233.1	ENSG00000274837	12601	AC010889.2	ENSG00000288049	153698	None	chrY:19913731-19913733
HERVL40_Yq11.223	HERV	HERVL40	internal	chrY	19924284	19924979	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010889.2	ENSG00000288049	164306	AC009233.1	ENSG00000274837	7151	None	None
LTR25_Yq11.223c	HERV	LTR25	internal	chrY	19926397	19928225	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010889.2	ENSG00000288049	166419	AC009233.1	ENSG00000274837	3905	None	None
HML5_Yq11.223b	HERV	HML5	oneside	chrY	19959451	19964024	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009233.1	ENSG00000274837	26951	RCC2P2	ENSG00000237997	22551	None	None
HERV9_Yq11.223a	HERV	HERV9	prototype	chrY	20006302	20011807	-	noncoding	ZNF886P	unprocessed_pseudogene	SENSE	ENSG00000232522	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_Yq11.223d	HERV	LTR25	unknown	chrY	20398315	20413068	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTTY10	ENSG00000229236	51848	ZNF885P	ENSG00000228764	1519	None	None
LTR25_Yq11.223e	HERV	LTR25	oneside	chrY	20427114	20427775	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTTY10	ENSG00000229236	37141	ZNF885P	ENSG00000228764	30318	None	None
HUERSP2_Yq11.223	HERV	HUERSP2	oneside	chrY	20447642	20451745	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF885P	ENSG00000228764	50846	TTTY10	ENSG00000229236	13171	None	None
HUERSP3_Yq11.223a	HERV	HUERSP3	internal	chrY	20465957	20469876	-	noncoding	TTTY10	lncRNA	SENSE	ENSG00000229236	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_Yq11.223b	HERV	HUERSP3	internal	chrY	20539035	20546169	+	noncoding	TTTY10	lncRNA	ANTISENSE	ENSG00000229236	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_Yq11.223c	HERV	HUERSP3	internal	chrY	20547949	20550872	-	noncoding	TTTY10	lncRNA	SENSE	ENSG00000229236	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_Yq11.223d	HERV	HUERSP3	internal	chrY	20553455	20558899	-	noncoding	TTTY10	lncRNA	SENSE	ENSG00000229236	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_Yq11.223f	HERV	LTR25	internal	chrY	20612558	20614724	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EIF1AY	ENSG00000198692	19404	AC009494.2	ENSG00000286247	110607	None	None
HERVE_Yq11.223	HERV	HERVE	prototype	chrY	20643149	20651932	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	EIF1AY	ENSG00000198692	49995	AC009494.2	ENSG00000286247	73399	None	None
HML5_Yq11.223c	HERV	HML5	oneside	chrY	20657735	20663850	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EIF1AY	ENSG00000198692	64581	AC009494.2	ENSG00000286247	61481	None	None
LTR46_Yq11.223	HERV	LTR46	prototype	chrY	20664214	20669988	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EIF1AY	ENSG00000198692	71060	AC009494.2	ENSG00000286247	55343	None	None
HERV3_Yq11.223a	HERV	HERV3	internal	chrY	20790551	20792521	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSFY4P	ENSG00000224482	16255	RPS4Y2	ENSG00000280969	9519	None	None
HML5_Yq11.223d	HERV	HML5	prototype	chrY	20801401	20806662	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS4Y2	ENSG00000280969	20369	HSFY4P	ENSG00000224482	2114	None	None
MER4B_Yq11.223a	HERV	MER4B	oneside	chrY	20877405	20884036	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM167AP1	ENSG00000226504	23308	GAPDHP17	ENSG00000229551	15068	None	None
HUERSP3B_Yq11.223	HERV	HUERSP3B	oneside	chrY	20890840	20896441	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP17	ENSG00000229551	28503	TMEM167AP1	ENSG00000226504	10903	None	None
HERVH_Yq11.223a	HERV	HERVH	oneside	chrY	20896484	20900798	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP17	ENSG00000229551	34147	TMEM167AP1	ENSG00000226504	6546	None	None
HERVH_Yq11.223b	HERV	HERVH	prototype	chrY	20902921	20905009	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM167AP1	ENSG00000226504	2335	GAPDHP17	ENSG00000229551	40584	None	None
MER4B_Yq11.223b	HERV	MER4B	oneside	chrY	20907626	20909538	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007876.1	ENSG00000254488	128751	TMEM167AP1	ENSG00000226504	64	None	None
PRIMA41_Yq11.223a	HERV	PRIMA41	oneside	chrY	20909871	20914288	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM167AP1	ENSG00000226504	2309	AC007876.1	ENSG00000254488	124001	None	None
PRIMA41_Yq11.223b	HERV	PRIMA41	oneside	chrY	20917352	20919360	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM167AP1	ENSG00000226504	9790	AC007876.1	ENSG00000254488	118929	None	None
HUERSP3_Yq11.223e	HERV	HUERSP3	internal	chrY	20950172	20952245	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007876.1	ENSG00000254488	86044	TMEM167AP1	ENSG00000226504	42610	None	None
HUERSP3_Yq11.223f	HERV	HUERSP3	oneside	chrY	20953005	20954409	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007876.1	ENSG00000254488	83880	TMEM167AP1	ENSG00000226504	45443	None	None
HML5_Yq11.223e	HERV	HML5	prototype	chrY	20967116	20974836	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM167AP1	ENSG00000226504	59554	AC007876.1	ENSG00000254488	63453	None	None
HUERSP3_Yq11.223g	HERV	HUERSP3	internal	chrY	20975920	20979872	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007876.1	ENSG00000254488	58417	TMEM167AP1	ENSG00000226504	68358	None	None
HUERSP3_Yq11.223h	HERV	HUERSP3	internal	chrY	20986067	20987124	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007876.1	ENSG00000254488	51165	TMEM167AP1	ENSG00000226504	78505	None	None
HML6_Yq11.223a	HERV	HML6	internal	chrY	21019985	21022249	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007876.1	ENSG00000254488	16040	TMEM167AP1	ENSG00000226504	112423	None	None
HERVH_Yq11.223c	HERV	HERVH	prototype	chrY	21035920	21045245	-	noncoding	AC007876.1	lncRNA	SENSE	ENSG00000254488	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML6_Yq11.223b	HERV	HML6	internal	chrY	21061840	21062942	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TOMM22P1	ENSG00000237427	67928	AC007876.1	ENSG00000254488	17116	None	None
HML5_Yq11.223f	HERV	HML5	oneside	chrY	21087112	21092532	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TOMM22P1	ENSG00000237427	38338	AC007876.1	ENSG00000254488	42388	None	None
HERV4_Yq11.223a	HERV	HERV4	internal	chrY	21103652	21105014	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007876.1	ENSG00000254488	58928	TOMM22P1	ENSG00000237427	25856	None	None
HERV4_Yq11.223b	HERV	HERV4	internal	chrY	21105479	21106733	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007876.1	ENSG00000254488	60755	TOMM22P1	ENSG00000237427	24137	None	None
MER4B_Yq11.223c	HERV	MER4B	internal	chrY	21137116	21138290	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NEFLP1	ENSG00000232634	82816	TOMM22P1	ENSG00000237427	5935	None	None
LTR25_Yq11.223g	HERV	LTR25	internal	chrY	21138826	21141259	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TOMM22P1	ENSG00000237427	7645	NEFLP1	ENSG00000232634	79847	None	None
LTR19_Yq11.223a	HERV	LTR19	oneside	chrY	21141258	21146830	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TOMM22P1	ENSG00000237427	10077	NEFLP1	ENSG00000232634	74276	None	chrY:21142444-21142456
LTR25_Yq11.223h	HERV	LTR25	internal	chrY	21146832	21149903	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TOMM22P1	ENSG00000237427	15651	NEFLP1	ENSG00000232634	71203	None	None
HML5_Yq11.223g	HERV	HML5	oneside	chrY	21180645	21186509	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TOMM22P1	ENSG00000237427	49464	NEFLP1	ENSG00000232634	34597	None	None
MER61_Yq11.223a	HERV	MER61	oneside	chrY	21211940	21213898	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TOMM22P1	ENSG00000237427	80759	NEFLP1	ENSG00000232634	7208	None	None
HERV3_Yq11.223b	HERV	HERV3	internal	chrY	21240702	21249208	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC010086.1	ENSG00000226918	62060	NEFLP1	ENSG00000232634	18613	chrY:21240321-21240910	None
HERVL_Yq11.223a	HERV	HERVL	unknown	chrY	21297606	21300945	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NEFLP1	ENSG00000232634	75517	AC010086.1	ENSG00000226918	10323	None	None
LTR19_Yq11.223b	HERV	LTR19	oneside	chrY	21348366	21350395	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRORY	ENSG00000183146	32559	AC010086.1	ENSG00000226918	29471	None	None
HERVK14C_Yq11.223a	HERV	HERVK14C	prototype	chrY	21446234	21452370	-	noncoding	AC010086.3	lncRNA	SENSE	ENSG00000288057	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrY:21451841-21451849
HERVEA_Yq11.223a	HERV	HERVEA	prototype	chrY	21571262	21579310	+	noncoding	TTTY13	lncRNA	ANTISENSE	ENSG00000184991	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK14C_Yq11.223b	HERV	HERVK14C	prototype	chrY	21580603	21586044	+	coding	TTTY13	lncRNA	ANTISENSE	ENSG00000184991	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HML3_Yq11.223b	HERV	HML3	oneside	chrY	21624095	21628006	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP5	ENSG00000271123	3677	TTTY13	ENSG00000184991	19014	None	None
HERVL_Yq11.223b	HERV	HERVL	oneside	chrY	21645119	21650036	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	USP9YP3	ENSG00000237023	11890	CDY10P	ENSG00000226042	6078	None	None
HML5_Yq11.223h	HERV	HML5	prototype	chrY	21650037	21658697	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY10P	ENSG00000226042	10996	USP9YP3	ENSG00000237023	3229	None	None
HERVL_Yq11.223c	HERV	HERVL	prototype	chrY	21683255	21689552	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	USP9YP8	ENSG00000229416	2137	CDY11P	ENSG00000230029	7018	None	None
LTR25_Yq11.223i	HERV	LTR25	oneside	chrY	21703055	21706399	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY11P	ENSG00000230029	4835	OFD1P16Y	ENSG00000277519	111180	None	None
LTR25_Yq11.223j	HERV	LTR25	internal	chrY	21706403	21707808	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P16Y	ENSG00000277519	109771	CDY11P	ENSG00000230029	8183	None	None
LTR25_Yq11.223k	HERV	LTR25	oneside	chrY	21707841	21710815	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P16Y	ENSG00000277519	106764	CDY11P	ENSG00000230029	9621	None	None
LTR25_Yq11.223l	HERV	LTR25	internal	chrY	21710818	21713008	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY11P	ENSG00000230029	12598	OFD1P16Y	ENSG00000277519	104571	None	None
HML3_Yq11.223c	HERV	HML3	prototype	chrY	21713009	21719078	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY11P	ENSG00000230029	14789	OFD1P16Y	ENSG00000277519	98501	None	None
LTR25_Yq11.223m	HERV	LTR25	internal	chrY	21719079	21721568	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY11P	ENSG00000230029	20859	OFD1P16Y	ENSG00000277519	96011	None	None
LTR25_Yq11.223n	HERV	LTR25	unknown	chrY	21722825	21730109	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P16Y	ENSG00000277519	87470	CDY11P	ENSG00000230029	24605	None	None
HUERSP3_Yq11.223i	HERV	HUERSP3	internal	chrY	21733319	21735285	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY11P	ENSG00000230029	35099	OFD1P16Y	ENSG00000277519	82294	None	None
LTR25_Yq11.223o	HERV	LTR25	internal	chrY	21736103	21737145	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P16Y	ENSG00000277519	80434	CDY11P	ENSG00000230029	37883	None	None
HML5_Yq11.223i	HERV	HML5	prototype	chrY	21744177	21747862	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY11P	ENSG00000230029	45957	OFD1P16Y	ENSG00000277519	69717	None	None
HML5_Yq11.223j	HERV	HML5	prototype	chrY	21757748	21761463	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P16Y	ENSG00000277519	56116	CDY11P	ENSG00000230029	59528	None	None
LTR25_Yq11.223p	HERV	LTR25	internal	chrY	21766679	21767721	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY11P	ENSG00000230029	68459	OFD1P16Y	ENSG00000277519	49858	None	None
HUERSP3_Yq11.223j	HERV	HUERSP3	internal	chrY	21768539	21770505	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P16Y	ENSG00000277519	47074	CDY11P	ENSG00000230029	70319	None	None
HUERSP3_Yq11.223k	HERV	HUERSP3	internal	chrY	21773934	21775319	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY11P	ENSG00000230029	75714	OFD1P16Y	ENSG00000277519	42260	None	None
LTR25_Yq11.223q	HERV	LTR25	prototype	chrY	21775320	21780995	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY11P	ENSG00000230029	77100	OFD1P16Y	ENSG00000277519	36584	None	None
LTR25_Yq11.223r	HERV	LTR25	internal	chrY	21781224	21782188	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P16Y	ENSG00000277519	35391	CDY11P	ENSG00000230029	83004	None	None
LTR25_Yq11.223s	HERV	LTR25	internal	chrY	21782252	21784740	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P16Y	ENSG00000277519	32839	CDY11P	ENSG00000230029	84032	None	None
HML3_Yq11.223d	HERV	HML3	oneside	chrY	21784741	21789281	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P16Y	ENSG00000277519	28298	CDY11P	ENSG00000230029	86521	None	None
HERVK14C_Yq11.223c	HERV	HERVK14C	prototype	chrY	21845472	21850950	-	noncoding	AC024236.1	lncRNA	ANTISENSE	ENSG00000286187	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_Yq11.223	HERV	HARLEQUIN	oneside	chrY	21852226	21855019	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007322.2	ENSG00000229725	16312	AC024236.1	ENSG00000286187	5505	None	None
HERVEA_Yq11.223b	HERV	HERVEA	oneside	chrY	21855018	21858167	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007322.2	ENSG00000229725	13164	AC024236.1	ENSG00000286187	8297	None	None
HML3_Yq11.223e	HERV	HML3	oneside	chrY	21967628	21969504	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P8Y	ENSG00000231159	2809	AC007322.3	ENSG00000237968	26035	None	None
HERV3_Yq11.223c	HERV	HERV3	prototype	chrY	21978506	21984010	+	noncoding	OFD1P8Y	unprocessed_pseudogene	SENSE	ENSG00000231159	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_Yq11.223d	HERV	HERV3	prototype	chrY	22012695	22021525	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P8Y	ENSG00000231159	7346	HSFY5P	ENSG00000232475	27029	None	None
HML3_Yq11.223f	HERV	HML3	prototype	chrY	22031146	22035768	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P8Y	ENSG00000231159	25797	HSFY5P	ENSG00000232475	12786	None	None
LTR19_Yq11.223c	HERV	LTR19	oneside	chrY	22230245	22232239	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTTY5	ENSG00000215560	64559	RBMY1KP	ENSG00000229234	13665	None	None
HML5_Yq11.223k	HERV	HML5	oneside	chrY	22248309	22255645	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTTY5	ENSG00000215560	41153	RBMY1KP	ENSG00000229234	31729	None	None
HML5_Yq11.223l	HERV	HML5	internal	chrY	22372532	22373914	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTTY25P	ENSG00000259247	40032	TSPY21P	ENSG00000237902	26489	None	None
HML3_Yq11.223g	HERV	HML3	oneside	chrY	22550627	22553926	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P9Y	ENSG00000230476	27063	HSFY7P	ENSG00000228571	12778	None	None
HML3_Yq11.223h	HERV	HML3	oneside	chrY	22553987	22555249	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P9Y	ENSG00000230476	25740	HSFY7P	ENSG00000228571	16138	None	None
HERV3_Yq11.223e	HERV	HERV3	prototype	chrY	22564865	22573695	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P9Y	ENSG00000230476	7294	HSFY7P	ENSG00000228571	27016	None	None
HERV3_Yq11.223f	HERV	HERV3	prototype	chrY	22602384	22607890	-	noncoding	OFD1P9Y	unprocessed_pseudogene	SENSE	ENSG00000230476	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_Yq11.223i	HERV	HML3	oneside	chrY	22616890	22618758	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P9Y	ENSG00000230476	2809	AC008175.2	ENSG00000273589	27273	None	None
HML5_Yq11.223m	HERV	HML5	oneside	chrY	22702898	22712410	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC016694.1	ENSG00000224917	30039	RBMY2WP	ENSG00000230727	50441	None	None
LTR19_Yq11.223d	HERV	LTR19	oneside	chrY	22724143	22726110	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016694.1	ENSG00000224917	51284	RBMY2WP	ENSG00000230727	36741	None	None
LTR25_Yq11.223t	HERV	LTR25	internal	chrY	22729148	22731117	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016694.1	ENSG00000224917	56289	RBMY2WP	ENSG00000230727	31734	None	None
LTR19_Yq11.223e	HERV	LTR19	oneside	chrY	22731118	22732234	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016694.1	ENSG00000224917	58259	RBMY2WP	ENSG00000230727	30617	None	None
HERV9_Yq11.223b	HERV	HERV9	prototype	chrY	22785419	22795665	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBMY2WP	ENSG00000230727	15632	TTTY17A	ENSG00000228240	55919	None	None
MER61_Yq11.223b	HERV	MER61	oneside	chrY	22802775	22805437	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TTTY17A	ENSG00000228240	46147	RBMY2WP	ENSG00000230727	32988	None	None
HERVK11_Yq11.223a	HERV	HERVK11	prototype	chrY	22829529	22834850	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTTY17A	ENSG00000228240	16734	RBMY2WP	ENSG00000230727	59742	None	None
HML5_Yq11.223n	HERV	HML5	oneside	chrY	22944425	22948804	+	noncoding	TTTY4	lncRNA	SENSE	ENSG00000226906	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_Yq11.223c	HERV	MER61	oneside	chrY	22949491	22952990	-	noncoding	TTTY4	lncRNA	ANTISENSE	ENSG00000226906	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_Yq11.223d	HERV	MER61	oneside	chrY	23033153	23035071	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF736P3Y	ENSG00000233126	14176	TRIM60P8Y	ENSG00000232764	6490	None	None
MER61_Yq11.223e	HERV	MER61	prototype	chrY	23065463	23069844	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DAZ1	ENSG00000188120	59511	TRIM60P9Y	ENSG00000227251	6277	None	None
MER61_Yq11.223f	HERV	MER61	prototype	chrY	23350860	23355241	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DAZ2	ENSG00000205944	59504	PPP1R12BP2	ENSG00000205936	24243	None	None
HML5_Yq11.223o	HERV	HML5	oneside	chrY	23483780	23493292	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC009947.1	ENSG00000230073	30029	REREP1Y	ENSG00000225189	11500	None	None
HML3_Yq11.223j	HERV	HML3	oneside	chrY	23576918	23578786	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P10Y	ENSG00000225466	2809	AC009947.2	ENSG00000236647	25533	None	None
HERV3_Yq11.223g	HERV	HERV3	prototype	chrY	23587796	23593299	+	noncoding	OFD1P10Y	unprocessed_pseudogene	SENSE	ENSG00000225466	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_Yq11.223h	HERV	HERV3	prototype	chrY	23621987	23630818	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P10Y	ENSG00000225466	7347	HSFY6P	ENSG00000224169	27021	None	None
HML3_Yq11.223k	HERV	HML3	prototype	chrY	23640445	23645057	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P10Y	ENSG00000225466	25805	HSFY6P	ENSG00000224169	12782	None	None
HERVK11_Yq11.223b	HERV	HERVK11	oneside	chrY	23720452	23723044	+	noncoding	XKRYP3	unprocessed_pseudogene	ANTISENSE	ENSG00000236620	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_Yq11.23a	HERV	HML6	oneside	chrY	23818800	23823486	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY15P	ENSG00000223362	32036	ELOCP9	ENSG00000231540	9741	None	None
HERVS71_Yq11.23a	HERV	HERVS71	oneside	chrY	23824419	23833577	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP9	ENSG00000231540	15360	CDY15P	ENSG00000223362	21945	None	None
HUERSP3_Yq11.23a	HERV	HUERSP3	internal	chrY	23834654	23835989	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP9	ENSG00000231540	25595	CDY15P	ENSG00000223362	19533	None	None
LTR25_Yq11.23a	HERV	LTR25	oneside	chrY	23835994	23838654	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY15P	ENSG00000223362	16868	ELOCP9	ENSG00000231540	26935	None	None
LTR25_Yq11.23b	HERV	LTR25	unknown	chrY	23838666	23848607	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP9	ENSG00000231540	29607	CDY15P	ENSG00000223362	6915	None	None
HUERSP3_Yq11.23b	HERV	HUERSP3	internal	chrY	23841022	23843337	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP9	ENSG00000231540	31963	CDY15P	ENSG00000223362	12185	None	None
LTR25_Yq11.23c	HERV	LTR25	oneside	chrY	23849516	23852913	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY15P	ENSG00000223362	2609	ELOCP9	ENSG00000231540	40457	None	None
LTR25_Yq11.23d	HERV	LTR25	internal	chrY	23852957	23853694	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP9	ENSG00000231540	43898	CDY15P	ENSG00000223362	1828	None	None
HERVL_Yq11.23a	HERV	HERVL	prototype	chrY	23869423	23873598	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	XKRYP4	ENSG00000231026	43643	CDY15P	ENSG00000223362	12332	None	None
LTR19_Yq11.23	HERV	LTR19	oneside	chrY	23952928	23954031	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	USP9YP12	ENSG00000227871	635	RAB9AP5	ENSG00000231423	2538	None	None
HML6_Yq11.23b	HERV	HML6	oneside	chrY	24016101	24020788	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY1B	ENSG00000172352	24441	ELOCP10	ENSG00000234081	8864	None	None
LTR25_Yq11.23e	HERV	LTR25	internal	chrY	24021623	24022981	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY1B	ENSG00000172352	22248	ELOCP10	ENSG00000234081	14386	None	None
HUERSP3_Yq11.23c	HERV	HUERSP3	internal	chrY	24024764	24026098	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP10	ENSG00000234081	17527	CDY1B	ENSG00000172352	19131	None	None
LTR25_Yq11.23f	HERV	LTR25	oneside	chrY	24026100	24029710	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY1B	ENSG00000172352	15519	ELOCP10	ENSG00000234081	18863	None	None
LTR25_Yq11.23g	HERV	LTR25	unknown	chrY	24029723	24039904	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP10	ENSG00000234081	22486	CDY1B	ENSG00000172352	5325	None	None
LTR25_Yq11.23h	HERV	LTR25	oneside	chrY	24039908	24043671	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY1B	ENSG00000172352	1558	ELOCP10	ENSG00000234081	32671	None	None
HERVL_Yq11.23b	HERV	HERVL	prototype	chrY	24069956	24074662	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	USP9YP35	ENSG00000237467	3137	CDY17P	ENSG00000231375	18469	None	None
HERVL_Yq11.23c	HERV	HERVL	oneside	chrY	24092833	24098071	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	USP9YP31	ENSG00000229250	2487	CDY18P	ENSG00000232205	6036	None	None
HML6_Yq11.23c	HERV	HML6	oneside	chrY	24116909	24121513	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY18P	ENSG00000232205	10891	AC023274.2	ENSG00000235981	20845	None	None
HML6_Yq11.23d	HERV	HML6	oneside	chrY	24131605	24136209	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023274.2	ENSG00000235981	6149	CDY18P	ENSG00000232205	25587	None	None
HML2_Yq11.23a	HERV	HML2	internal	chrY	24251690	24254888	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00265-2P	ENSG00000224827	21357	UBE2Q2P4Y	ENSG00000225491	12706	None	None
HERV9_Yq11.23a	HERV	HERV9	prototype	chrY	24419168	24429415	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBMY2XP	ENSG00000234399	15642	TTTY17B	ENSG00000227439	55917	None	None
MER61_Yq11.23a	HERV	MER61	oneside	chrY	24436541	24439183	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TTTY17B	ENSG00000227439	46149	RBMY2XP	ENSG00000234399	33015	None	None
HERVK11_Yq11.23a	HERV	HERVK11	prototype	chrY	24463277	24468598	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTTY17B	ENSG00000227439	16734	RBMY2XP	ENSG00000234399	59751	None	None
HML5_Yq11.23a	HERV	HML5	oneside	chrY	24578183	24582562	+	noncoding	TTTY4B	lncRNA	SENSE	ENSG00000235412	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_Yq11.23b	HERV	MER61	oneside	chrY	24583248	24586734	-	noncoding	TTTY4B	lncRNA	ANTISENSE	ENSG00000235412	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_Yq11.23c	HERV	MER61	oneside	chrY	24666897	24668815	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF736P2Y	ENSG00000226270	14842	TRIM60P10Y	ENSG00000232976	6491	None	None
MER61_Yq11.23d	HERV	MER61	prototype	chrY	24699208	24703588	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DAZ3	ENSG00000187191	59481	TRIM60P11Y	ENSG00000227837	6276	None	None
MER61_Yq11.23e	HERV	MER61	prototype	chrY	24966519	24970900	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DAZ4	ENSG00000205916	59479	AC006338.2	ENSG00000278602	6276	None	None
MER61_Yq11.23f	HERV	MER61	oneside	chrY	25001289	25003207	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF736P1Y	ENSG00000223978	14813	AC006338.1	ENSG00000278197	6493	None	None
MER61_Yq11.23g	HERV	MER61	oneside	chrY	25083356	25086846	+	noncoding	TTTY4C	lncRNA	ANTISENSE	ENSG00000228296	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_Yq11.23b	HERV	HML5	oneside	chrY	25087532	25091911	-	noncoding	TTTY4C	lncRNA	SENSE	ENSG00000228296	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVK11_Yq11.23b	HERV	HERVK11	prototype	chrY	25201510	25206831	+	noncoding	TTTY17C	lncRNA	ANTISENSE	ENSG00000223641	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_Yq11.23h	HERV	MER61	oneside	chrY	25230926	25233569	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TTTY17C	ENSG00000223641	17537	RBMY2YP	ENSG00000227633	33015	None	None
HERV9_Yq11.23b	HERV	HERV9	prototype	chrY	25240699	25250946	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBMY2YP	ENSG00000227633	15638	TTTY17C	ENSG00000223641	27310	None	None
HML2_Yq11.23b	HERV	HML2	internal	chrY	25415255	25418454	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00266-4P	ENSG00000228786	20536	UBE2Q2P5Y	ENSG00000223636	12702	None	None
HML6_Yq11.23e	HERV	HML6	oneside	chrY	25533930	25538533	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007562.1	ENSG00000235583	6144	CDY19P	ENSG00000237823	25589	None	None
HML6_Yq11.23f	HERV	HML6	oneside	chrY	25548623	25553226	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY19P	ENSG00000237823	10896	AC007562.1	ENSG00000235583	20837	None	None
HERVL_Yq11.23d	HERV	HERVL	oneside	chrY	25572065	25577303	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	USP9YP36	ENSG00000229709	2487	CDY19P	ENSG00000237823	6032	None	None
HERVL_Yq11.23e	HERV	HERVL	prototype	chrY	25595473	25600179	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	USP9YP33	ENSG00000232064	3128	CDY20P	ENSG00000225609	18465	None	None
LTR25_Yq11.23i	HERV	LTR25	oneside	chrY	25626460	25630223	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY1	ENSG00000172288	1558	ELOCP34	ENSG00000270535	32677	None	None
LTR25_Yq11.23j	HERV	LTR25	unknown	chrY	25630227	25640411	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP34	ENSG00000270535	22489	CDY1	ENSG00000172288	5325	None	None
HUERSP3_Yq11.23d	HERV	HUERSP3	internal	chrY	25640424	25641358	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY1	ENSG00000172288	15522	ELOCP34	ENSG00000270535	21542	None	None
LTR25_Yq11.23k	HERV	LTR25	oneside	chrY	25641364	25644034	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY1	ENSG00000172288	16462	ELOCP34	ENSG00000270535	18866	None	None
HUERSP3_Yq11.23e	HERV	HUERSP3	internal	chrY	25644036	25645370	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP34	ENSG00000270535	17530	CDY1	ENSG00000172288	19134	None	None
LTR25_Yq11.23l	HERV	LTR25	internal	chrY	25647156	25648514	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY1	ENSG00000172288	22254	ELOCP34	ENSG00000270535	14386	None	None
HML6_Yq11.23g	HERV	HML6	oneside	chrY	25649349	25654036	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY1	ENSG00000172288	24447	ELOCP34	ENSG00000270535	8864	None	None
HERVL_Yq11.23f	HERV	HERVL	prototype	chrY	25796510	25800685	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	XKRYP5	ENSG00000223406	43640	CDY22P	ENSG00000229343	12328	None	None
LTR25_Yq11.23m	HERV	LTR25	internal	chrY	25816410	25817147	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP17	ENSG00000232695	43796	CDY22P	ENSG00000229343	1844	None	None
LTR25_Yq11.23n	HERV	LTR25	oneside	chrY	25817191	25820588	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY22P	ENSG00000229343	2625	ELOCP17	ENSG00000232695	40355	None	None
LTR25_Yq11.23o	HERV	LTR25	unknown	chrY	25821483	25831428	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP17	ENSG00000232695	29515	CDY22P	ENSG00000229343	6917	None	None
HUERSP3_Yq11.23f	HERV	HUERSP3	internal	chrY	25826757	25829072	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP17	ENSG00000232695	31871	CDY22P	ENSG00000229343	12191	None	None
LTR25_Yq11.23p	HERV	LTR25	oneside	chrY	25831440	25834100	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY22P	ENSG00000229343	16874	ELOCP17	ENSG00000232695	26843	None	None
HUERSP3_Yq11.23g	HERV	HUERSP3	internal	chrY	25834105	25835440	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP17	ENSG00000232695	25503	CDY22P	ENSG00000229343	19539	None	None
HERVS71_Yq11.23b	HERV	HERVS71	oneside	chrY	25836516	25845674	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP17	ENSG00000232695	15269	CDY22P	ENSG00000229343	21950	None	None
HML6_Yq11.23h	HERV	HML6	oneside	chrY	25846607	25851293	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY22P	ENSG00000229343	32041	ELOCP17	ENSG00000232695	9650	None	None
HERVK11_Yq11.23c	HERV	HERVK11	oneside	chrY	25947032	25949624	-	noncoding	XKRYP6	unprocessed_pseudogene	ANTISENSE	ENSG00000237546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_Yq11.23a	HERV	HML3	oneside	chrY	26025021	26028320	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P15Y	ENSG00000234888	27459	HSFY8P	ENSG00000233156	12784	None	None
HML3_Yq11.23b	HERV	HML3	oneside	chrY	26028381	26029633	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P15Y	ENSG00000234888	26146	HSFY8P	ENSG00000233156	16144	None	None
HERV3_Yq11.23a	HERV	HERV3	prototype	chrY	26039260	26048091	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P15Y	ENSG00000234888	7688	HSFY8P	ENSG00000233156	27023	None	None
HERV3_Yq11.23b	HERV	HERV3	prototype	chrY	26076781	26082284	-	noncoding	OFD1P15Y	unprocessed_pseudogene	SENSE	ENSG00000234888	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_Yq11.23c	HERV	HML3	oneside	chrY	26091303	26093178	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P15Y	ENSG00000234888	2810	RBMY2DP	ENSG00000215507	30496	None	None
HML5_Yq11.23c	HERV	HML5	oneside	chrY	26177316	26186828	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RBMY2DP	ENSG00000215507	44008	REREP2Y	ENSG00000235014	11503	None	None
HERVEA_Yq12	HERV	HERVEA	prototype	chrY	57155464	57163960	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	CTBP2P1	ENSG00000235857	299976	None	None
ERVLE_1_KI270760v1_alt	HERV	ERVLE	internal	chr1_KI270760v1_alt	28449	31224	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_1_KI270761v1_alt	HERV	MER4B	oneside	chr1_KI270761v1_alt	69946	71846	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_1_KI270761v1_alt	HERV	MER101	internal	chr1_KI270761v1_alt	73142	75914	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_1_KI270761v1_alt	HERV	HML6	prototype	chr1_KI270761v1_alt	85715	88503	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_1_KI270762v1_alt	HERV	HERVL	internal	chr1_KI270762v1_alt	176482	177478	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1_KI270762v1_alt	HERV	ERVLE	internal	chr1_KI270762v1_alt	188556	189286	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_1_KI270763v1_alt	HERV	MER4B	internal	chr1_KI270763v1_alt	637559	638764	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_1_KI270765v1_alt	HERV	PRIMA4	internal	chr1_KI270765v1_alt	39869	41869	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1_KI270765v1_alt	HERV	ERVLE	internal	chr1_KI270765v1_alt	102063	105374	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_1_KI270766v1_alt(a)	HERV	HERV3	oneside	chr1_KI270766v1_alt	30242	35465	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_1_KI270766v1_alt(b)	HERV	HERV3	oneside	chr1_KI270766v1_alt	82435	87659	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_1_KI270766v1_alt	HERV	HML2	prototype	chr1_KI270766v1_alt	150436	159977	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_1_KI270892v1_alt	HERV	MER4B	oneside	chr1_KI270892v1_alt	66324	68224	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_1_KI270892v1_alt	HERV	MER101	internal	chr1_KI270892v1_alt	69520	72292	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_1_KI270892v1_alt	HERV	HML6	prototype	chr1_KI270892v1_alt	82093	84881	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2_GL383521v1_alt	HERV	ERV316A3	internal	chr2_GL383521v1_alt	86107	87174	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_2_KI270768v1_alt	HERV	ERV316A3	oneside	chr2_KI270768v1_alt	41647	42511	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_2_KI270770v1_alt	HERV	HERVFRD	oneside	chr2_KI270770v1_alt	102336	105480	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2_KI270772v1_alt	HERV	ERVLB4	internal	chr2_KI270772v1_alt	127550	128662	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2_KI270775v1_alt(a)	HERV	ERVLB4	internal	chr2_KI270775v1_alt	50560	52598	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2_KI270775v1_alt(b)	HERV	ERVLB4	oneside	chr2_KI270775v1_alt	63893	65154	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_2_KI270776v1_alt	HERV	MER4	oneside	chr2_KI270776v1_alt	472	5298	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_2_KI270776v1_alt	HERV	MER4B	internal	chr2_KI270776v1_alt	46645	49402	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_2_KI270776v1_alt	HERV	MER101	internal	chr2_KI270776v1_alt	50330	52290	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_2_KI270894v1_alt	HERV	HERVH	prototype	chr2_KI270894v1_alt	17186	23070	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_2_KI270894v1_alt	HERV	ERVLB4	internal	chr2_KI270894v1_alt	80190	81300	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_3_GL383526v1_alt	HERV	HML3	oneside	chr3_GL383526v1_alt	122432	127896	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3_JH636055v2_alt(a)	HERV	ERV316A3	internal	chr3_JH636055v2_alt	55440	57000	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3_JH636055v2_alt(b)	HERV	ERV316A3	internal	chr3_JH636055v2_alt	57273	58308	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_3_KI270778v1_alt	HERV	HERVL	prototype	chr3_KI270778v1_alt	46543	52690	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3_KI270778v1_alt	HERV	ERV316A3	internal	chr3_KI270778v1_alt	112861	114023	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_3_KI270778v1_alt	HERV	ERVL	internal	chr3_KI270778v1_alt	170646	173585	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3_KI270778v1_alt	HERV	HERVH	prototype	chr3_KI270778v1_alt	204684	210497	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_3_KI270779v1_alt	HERV	MER4	oneside	chr3_KI270779v1_alt	87854	90970	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_3_KI270780v1_alt(a)	HERV	HERVE	oneside	chr3_KI270780v1_alt	28622	33392	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_3_KI270780v1_alt(b)	HERV	HERVE	internal	chr3_KI270780v1_alt	51568	55629	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_3_KI270780v1_alt(c)	HERV	HERVE	internal	chr3_KI270780v1_alt	74200	78251	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3_KI270780v1_alt(a)	HERV	ERVLB4	internal	chr3_KI270780v1_alt	98699	99268	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3_KI270780v1_alt(b)	HERV	ERVLB4	internal	chr3_KI270780v1_alt	104822	105371	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVS71_3_KI270780v1_alt	HERV	HERVS71	prototype	chr3_KI270780v1_alt	172246	179665	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_3_KI270780v1_alt	HERV	HERVH	prototype	chr3_KI270780v1_alt	204056	209803	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_3_KI270781v1_alt	HERV	ERV316A3	oneside	chr3_KI270781v1_alt	67136	69268	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_3_KI270781v1_alt	HERV	ERVLB4	internal	chr3_KI270781v1_alt	79711	84411	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_3_KI270783v1_alt	HERV	ERVLE	internal	chr3_KI270783v1_alt	87417	88039	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_3_KI270783v1_alt	HERV	HARLEQUIN	prototype	chr3_KI270783v1_alt	90548	98031	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_3_KI270783v1_alt	HERV	MER41	internal	chr3_KI270783v1_alt	108426	109187	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_3_KI270784v1_alt	HERV	PRIMA41	internal	chr3_KI270784v1_alt	115971	117165	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_3_KI270895v1_alt(a)	HERV	MER4	internal	chr3_KI270895v1_alt	73728	75290	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_3_KI270895v1_alt(b)	HERV	MER4	oneside	chr3_KI270895v1_alt	75309	76840	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_3_KI270924v1_alt(a)	HERV	MER4	internal	chr3_KI270924v1_alt	75571	77138	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_3_KI270924v1_alt(b)	HERV	MER4	oneside	chr3_KI270924v1_alt	77149	78687	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_3_KI270934v1_alt(a)	HERV	MER4	internal	chr3_KI270934v1_alt	73727	75288	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_3_KI270934v1_alt(b)	HERV	MER4	oneside	chr3_KI270934v1_alt	75307	76838	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_3_KI270935v1_alt	HERV	MER4	oneside	chr3_KI270935v1_alt	87854	90970	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_3_KI270936v1_alt(a)	HERV	MER4	internal	chr3_KI270936v1_alt	73723	75284	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_3_KI270936v1_alt(b)	HERV	MER4	oneside	chr3_KI270936v1_alt	75305	76836	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_3_KI270937v1_alt	HERV	MER4	oneside	chr3_KI270937v1_alt	73946	77057	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_4_GL000257v2_alt(a)	HERV	MER4	prototype	chr4_GL000257v2_alt	98399	104200	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_4_GL000257v2_alt(b)	HERV	MER4	oneside	chr4_GL000257v2_alt	233337	237741	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH48_4_GL000257v2_alt	HERV	HERVH48	oneside	chr4_GL000257v2_alt	248097	253827	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_4_GL000257v2_alt	HERV	MER61	prototype	chr4_GL000257v2_alt	311161	313089	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_4_GL000257v2_alt	HERV	HML6	prototype	chr4_GL000257v2_alt	320605	327257	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV30_4_GL000257v2_alt	HERV	HERV30	oneside	chr4_GL000257v2_alt	377329	381700	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_4_GL000257v2_alt(a)	HERV	MER4B	oneside	chr4_GL000257v2_alt	440360	450812	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4_GL000257v2_alt	HERV	ERVLB4	oneside	chr4_GL000257v2_alt	462755	465267	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_4_GL000257v2_alt	HERV	HERV3	oneside	chr4_GL000257v2_alt	477064	483816	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_4_GL000257v2_alt(b)	HERV	MER4B	oneside	chr4_GL000257v2_alt	528963	538959	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_4_GL000257v2_alt	HERV	LTR57	internal	chr4_GL000257v2_alt	533567	534208	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_4_GL383527v1_alt	HERV	PRIMA4	internal	chr4_GL383527v1_alt	8733	9696	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_4_GL383527v1_alt	HERV	MER4	oneside	chr4_GL383527v1_alt	9772	15167	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER61_4_GL383527v1_alt	HERV	MER61	prototype	chr4_GL383527v1_alt	36571	42913	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_4_GL383527v1_alt	HERV	HERVL	oneside	chr4_GL383527v1_alt	86156	87361	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4_GL383528v1_alt	HERV	ERVLE	internal	chr4_GL383528v1_alt	26211	27524	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_4_GL383528v1_alt(a)	HERV	ERVL	internal	chr4_GL383528v1_alt	27930	29176	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_4_GL383528v1_alt(b)	HERV	ERVL	prototype	chr4_GL383528v1_alt	184458	189708	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_4_KI270788v1_alt	HERV	ERVLE	internal	chr4_KI270788v1_alt	129099	131119	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_4_KI270790v1_alt	HERV	ERVLB4	opposite*	chr4_KI270790v1_alt	125600	129792	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4_KI270896v1_alt	HERV	HERVH	prototype	chr4_KI270896v1_alt	263431	269385	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_4_KI270896v1_alt	HERV	PRIMA41	internal	chr4_KI270896v1_alt	322535	327345	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_4_KI270925v1_alt	HERV	HERVH	prototype	chr4_KI270925v1_alt	117682	123546	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL32_4_KI270925v1_alt(a)	HERV	HERVL32	oneside	chr4_KI270925v1_alt	247026	248772	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL32_4_KI270925v1_alt(b)	HERV	HERVL32	oneside	chr4_KI270925v1_alt	248879	250158	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR23_5_GL339449v2_alt	HERV	LTR23	internal	chr5_GL339449v2_alt	744520	746337	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_5_GL339449v2_alt(a)	HERV	HML6	oneside	chr5_GL339449v2_alt	790326	792272	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_5_GL339449v2_alt(b)	HERV	HML6	oneside	chr5_GL339449v2_alt	1343442	1345388	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5_GL339449v2_alt	HERV	ERVLE	internal	chr5_GL339449v2_alt	1566661	1569182	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_5_GL339449v2_alt(c)	HERV	HML6	prototype	chr5_GL339449v2_alt	1570382	1576886	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_5_GL949742v1_alt	HERV	ERVLB4	oneside	chr5_GL949742v1_alt	49682	55130	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5_GL949742v1_alt	HERV	ERVLE	internal	chr5_GL949742v1_alt	200972	201941	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5_KI270791v1_alt(a)	HERV	ERVLE	internal	chr5_KI270791v1_alt	51045	52673	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5_KI270791v1_alt(b)	HERV	ERVLE	internal	chr5_KI270791v1_alt	59671	61088	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5_KI270794v1_alt	HERV	ERVLE	oneside	chr5_KI270794v1_alt	124661	126505	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5_KI270795v1_alt	HERV	ERV316A3	oneside	chr5_KI270795v1_alt	70596	75876	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR23_5_KI270897v1_alt	HERV	LTR23	internal	chr5_KI270897v1_alt	15996	17811	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_5_KI270897v1_alt(a)	HERV	HML6	oneside	chr5_KI270897v1_alt	874915	876861	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_5_KI270897v1_alt	HERV	ERVLE	internal	chr5_KI270897v1_alt	1098151	1100672	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_5_KI270897v1_alt(b)	HERV	HML6	prototype	chr5_KI270897v1_alt	1101872	1108376	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_5_KI270898v1_alt	HERV	ERV316A3	oneside	chr5_KI270898v1_alt	66002	71286	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVS71_6_GL000250v2_alt	HERV	HERVS71	prototype	chr6_GL000250v2_alt	31772	42095	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_6_GL000250v2_alt	HERV	LTR57	prototype	chr6_GL000250v2_alt	133857	141453	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6_GL000250v2_alt(a)	HERV	MER41	internal	chr6_GL000250v2_alt	408098	408887	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6_GL000250v2_alt(b)	HERV	MER41	oneside	chr6_GL000250v2_alt	408889	410126	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_6_GL000250v2_alt	HERV	MER4	oneside	chr6_GL000250v2_alt	787520	793063	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000250v2_alt(a)	HERV	ERV316A3	internal	chr6_GL000250v2_alt	845326	849811	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000250v2_alt(b)	HERV	ERV316A3	prototype	chr6_GL000250v2_alt	1033642	1038785	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000250v2_alt(c)	HERV	ERV316A3	oneside	chr6_GL000250v2_alt	1058938	1060163	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000250v2_alt(d)	HERV	ERV316A3	oneside	chr6_GL000250v2_alt	1081572	1084311	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000250v2_alt(e)	HERV	ERV316A3	prototype	chr6_GL000250v2_alt	1134004	1139479	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000250v2_alt(f)	HERV	ERV316A3	internal	chr6_GL000250v2_alt	1151852	1153281	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000250v2_alt(g)	HERV	ERV316A3	prototype	chr6_GL000250v2_alt	1172456	1177926	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000250v2_alt(h)	HERV	ERV316A3	oneside	chr6_GL000250v2_alt	1204668	1208164	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_6_GL000250v2_alt	HERV	HERVP71A	internal	chr6_GL000250v2_alt	1220203	1222631	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000250v2_alt(i)	HERV	ERV316A3	prototype	chr6_GL000250v2_alt	1255663	1260999	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000250v2_alt(j)	HERV	ERV316A3	internal	chr6_GL000250v2_alt	1606257	1606976	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6_GL000250v2_alt(a)	HERV	ERVLE	internal	chr6_GL000250v2_alt	1709413	1710037	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6_GL000250v2_alt(b)	HERV	ERVLE	internal	chr6_GL000250v2_alt	2366809	2370861	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_6_GL000250v2_alt	HERV	HUERSP2	oneside	chr6_GL000250v2_alt	3706557	3708694	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_6_GL000250v2_alt	HERV	HML6	oneside	chr6_GL000250v2_alt	3807739	3811843	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_6_GL000250v2_alt	HERV	HML5	oneside	chr6_GL000250v2_alt	4353906	4361194	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_6_GL000250v2_alt	HERV	HUERSP3	prototype	chr6_GL000250v2_alt	4422363	4429626	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6_GL000250v2_alt	HERV	HERVH	oneside	chr6_GL000250v2_alt	4650563	4656454	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_6_GL000250v2_alt	HERV	HARLEQUIN	internal	chr6_GL000250v2_alt	4656535	4659893	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_6_GL000251v2_alt	HERV	HML2	unknown	chr6_GL000251v2_alt	172412	182779	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6_GL000251v2_alt(a)	HERV	ERVLE	internal	chr6_GL000251v2_alt	194186	195275	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVS71_6_GL000251v2_alt	HERV	HERVS71	prototype	chr6_GL000251v2_alt	256873	267206	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_6_GL000251v2_alt	HERV	LTR57	prototype	chr6_GL000251v2_alt	358808	366564	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6_GL000251v2_alt(a)	HERV	MER41	internal	chr6_GL000251v2_alt	629025	629808	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6_GL000251v2_alt(b)	HERV	MER41	oneside	chr6_GL000251v2_alt	629814	631051	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000251v2_alt(a)	HERV	ERV316A3	oneside	chr6_GL000251v2_alt	695687	699084	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6_GL000251v2_alt(a)	HERV	HERVH	prototype	chr6_GL000251v2_alt	732044	739375	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000251v2_alt(b)	HERV	ERV316A3	internal	chr6_GL000251v2_alt	890810	892394	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_6_GL000251v2_alt	HERV	MER4	oneside	chr6_GL000251v2_alt	1008316	1013859	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000251v2_alt(c)	HERV	ERV316A3	internal	chr6_GL000251v2_alt	1066111	1070597	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_6_GL000251v2_alt	HERV	HERVL40	internal	chr6_GL000251v2_alt	1170190	1170987	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000251v2_alt(d)	HERV	ERV316A3	oneside	chr6_GL000251v2_alt	1197381	1201541	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000251v2_alt(e)	HERV	ERV316A3	prototype	chr6_GL000251v2_alt	1251592	1256735	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000251v2_alt(f)	HERV	ERV316A3	oneside	chr6_GL000251v2_alt	1276888	1278113	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000251v2_alt(g)	HERV	ERV316A3	oneside	chr6_GL000251v2_alt	1299522	1302261	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000251v2_alt(h)	HERV	ERV316A3	prototype	chr6_GL000251v2_alt	1355672	1361147	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000251v2_alt(i)	HERV	ERV316A3	internal	chr6_GL000251v2_alt	1373526	1374955	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000251v2_alt(j)	HERV	ERV316A3	prototype	chr6_GL000251v2_alt	1394130	1399600	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000251v2_alt(k)	HERV	ERV316A3	oneside	chr6_GL000251v2_alt	1426343	1429839	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_6_GL000251v2_alt	HERV	HERVP71A	oneside	chr6_GL000251v2_alt	1441878	1449755	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000251v2_alt(l)	HERV	ERV316A3	prototype	chr6_GL000251v2_alt	1477339	1482675	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000251v2_alt(m)	HERV	ERV316A3	internal	chr6_GL000251v2_alt	1755749	1757164	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6_GL000251v2_alt(b)	HERV	ERVLE	internal	chr6_GL000251v2_alt	1859635	1860286	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6_GL000251v2_alt(a)	HERV	HERVL	oneside	chr6_GL000251v2_alt	2445944	2451403	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6_GL000251v2_alt(c)	HERV	ERVLE	internal	chr6_GL000251v2_alt	2516661	2520691	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_6_GL000251v2_alt(a)	HERV	HARLEQUIN	oneside	chr6_GL000251v2_alt	2664320	2669221	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_6_GL000251v2_alt	HERV	HERV3	oneside	chr6_GL000251v2_alt	2708182	2710894	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_6_GL000251v2_alt	HERV	HML3	prototype	chr6_GL000251v2_alt	2714411	2718528	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6_GL000251v2_alt(a)	HERV	ERVLB4	oneside	chr6_GL000251v2_alt	2725931	2727463	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6_GL000251v2_alt(d)	HERV	ERVLE	internal	chr6_GL000251v2_alt	2772365	2773000	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000251v2_alt(n)	HERV	ERV316A3	internal	chr6_GL000251v2_alt	2781465	2782907	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6_GL000251v2_alt(b)	HERV	ERVLB4	oneside	chr6_GL000251v2_alt	2801360	2802795	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6_GL000251v2_alt(c)	HERV	ERVLB4	internal	chr6_GL000251v2_alt	2856663	2857451	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000251v2_alt(o)	HERV	ERV316A3	oneside	chr6_GL000251v2_alt	2864091	2867632	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6_GL000251v2_alt(b)	HERV	HERVL	oneside	chr6_GL000251v2_alt	2910193	2916309	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000251v2_alt(p)	HERV	ERV316A3	prototype	chr6_GL000251v2_alt	2940745	2946368	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_6_GL000251v2_alt	HERV	HUERSP2	oneside	chr6_GL000251v2_alt	3812428	3814565	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_6_GL000251v2_alt(a)	HERV	HML6	oneside	chr6_GL000251v2_alt	3913588	3917681	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_6_GL000251v2_alt	HERV	HERV9	prototype	chr6_GL000251v2_alt	3955851	3961282	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_6_GL000251v2_alt(b)	HERV	HML6	oneside	chr6_GL000251v2_alt	3975830	3981087	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH19_6_GL000251v2_alt	HERV	HERVFH19	oneside	chr6_GL000251v2_alt	4120277	4122108	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_6_GL000251v2_alt	HERV	HML5	oneside	chr6_GL000251v2_alt	4461343	4468630	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_6_GL000251v2_alt	HERV	HUERSP3	prototype	chr6_GL000251v2_alt	4529519	4536796	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6_GL000251v2_alt(c)	HERV	MER41	internal	chr6_GL000251v2_alt	4546952	4550137	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6_GL000251v2_alt(b)	HERV	HERVH	oneside	chr6_GL000251v2_alt	4757389	4763279	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_6_GL000251v2_alt(b)	HERV	HARLEQUIN	internal	chr6_GL000251v2_alt	4763360	4766723	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVS71_6_GL000252v2_alt	HERV	HERVS71	prototype	chr6_GL000252v2_alt	31779	42102	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6_GL000252v2_alt(a)	HERV	MER41	internal	chr6_GL000252v2_alt	408080	408864	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6_GL000252v2_alt(b)	HERV	MER41	oneside	chr6_GL000252v2_alt	408870	410107	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000252v2_alt(a)	HERV	ERV316A3	oneside	chr6_GL000252v2_alt	474757	478154	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6_GL000252v2_alt(a)	HERV	HERVH	prototype	chr6_GL000252v2_alt	511085	518416	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000252v2_alt(b)	HERV	ERV316A3	internal	chr6_GL000252v2_alt	669876	671460	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_6_GL000252v2_alt	HERV	MER4	oneside	chr6_GL000252v2_alt	787380	792923	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000252v2_alt(c)	HERV	ERV316A3	internal	chr6_GL000252v2_alt	845180	849666	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_6_GL000252v2_alt	HERV	HERVL40	internal	chr6_GL000252v2_alt	949223	950020	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000252v2_alt(d)	HERV	ERV316A3	oneside	chr6_GL000252v2_alt	976398	980714	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000252v2_alt(e)	HERV	ERV316A3	prototype	chr6_GL000252v2_alt	1030820	1035949	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000252v2_alt(f)	HERV	ERV316A3	oneside	chr6_GL000252v2_alt	1056113	1057336	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000252v2_alt(g)	HERV	ERV316A3	oneside	chr6_GL000252v2_alt	1078770	1081509	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000252v2_alt(h)	HERV	ERV316A3	prototype	chr6_GL000252v2_alt	1131412	1136887	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000252v2_alt(i)	HERV	ERV316A3	internal	chr6_GL000252v2_alt	1149329	1150750	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000252v2_alt(j)	HERV	ERV316A3	prototype	chr6_GL000252v2_alt	1169940	1175409	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000252v2_alt(k)	HERV	ERV316A3	oneside	chr6_GL000252v2_alt	1202488	1205990	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_6_GL000252v2_alt	HERV	HERVP71A	oneside	chr6_GL000252v2_alt	1218030	1225907	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000252v2_alt(l)	HERV	ERV316A3	prototype	chr6_GL000252v2_alt	1253489	1258825	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000252v2_alt(m)	HERV	ERV316A3	internal	chr6_GL000252v2_alt	1531918	1533333	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6_GL000252v2_alt(a)	HERV	ERVLE	internal	chr6_GL000252v2_alt	1635767	1636391	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6_GL000252v2_alt	HERV	HERVL	oneside	chr6_GL000252v2_alt	2222678	2228139	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6_GL000252v2_alt(b)	HERV	ERVLE	internal	chr6_GL000252v2_alt	2293614	2297645	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_6_GL000252v2_alt(a)	HERV	HARLEQUIN	oneside	chr6_GL000252v2_alt	2441208	2446109	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_6_GL000252v2_alt	HERV	HERV3	oneside	chr6_GL000252v2_alt	2485070	2487782	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_6_GL000252v2_alt	HERV	HML3	prototype	chr6_GL000252v2_alt	2491298	2495415	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6_GL000252v2_alt(a)	HERV	ERVLB4	oneside	chr6_GL000252v2_alt	2502805	2504337	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6_GL000252v2_alt(c)	HERV	ERVLE	internal	chr6_GL000252v2_alt	2549210	2549845	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000252v2_alt(n)	HERV	ERV316A3	internal	chr6_GL000252v2_alt	2558300	2559742	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6_GL000252v2_alt(b)	HERV	ERVLB4	internal	chr6_GL000252v2_alt	2568992	2570008	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVKC4_6_GL000252v2_alt	HERV	HERVKC4	prototype	chr6_GL000252v2_alt	3232465	3238826	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_6_GL000252v2_alt	HERV	HUERSP2	oneside	chr6_GL000252v2_alt	3615421	3617558	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_6_GL000252v2_alt	HERV	HML6	oneside	chr6_GL000252v2_alt	3715762	3719865	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_6_GL000252v2_alt	HERV	HML1	prototype	chr6_GL000252v2_alt	3771979	3777204	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_6_GL000252v2_alt	HERV	HERV9	internal	chr6_GL000252v2_alt	3807663	3810543	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_6_GL000252v2_alt	HERV	HUERSP3	oneside	chr6_GL000252v2_alt	3927366	3929898	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH19_6_GL000252v2_alt	HERV	HERVFH19	oneside	chr6_GL000252v2_alt	3951570	3953403	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_6_GL000252v2_alt	HERV	HML5	oneside	chr6_GL000252v2_alt	4292762	4300049	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6_GL000252v2_alt(c)	HERV	MER41	internal	chr6_GL000252v2_alt	4378982	4382145	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6_GL000252v2_alt(b)	HERV	HERVH	oneside	chr6_GL000252v2_alt	4589418	4595308	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_6_GL000252v2_alt(b)	HERV	HARLEQUIN	internal	chr6_GL000252v2_alt	4595389	4598752	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVS71_6_GL000253v2_alt	HERV	HERVS71	prototype	chr6_GL000253v2_alt	31752	42075	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_6_GL000253v2_alt	HERV	LTR57	oneside	chr6_GL000253v2_alt	133831	140121	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6_GL000253v2_alt(a)	HERV	MER41	internal	chr6_GL000253v2_alt	408036	408820	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6_GL000253v2_alt(b)	HERV	MER41	oneside	chr6_GL000253v2_alt	408826	410063	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000253v2_alt(a)	HERV	ERV316A3	oneside	chr6_GL000253v2_alt	474719	478116	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6_GL000253v2_alt	HERV	HERVH	prototype	chr6_GL000253v2_alt	511047	518378	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000253v2_alt(b)	HERV	ERV316A3	internal	chr6_GL000253v2_alt	669498	671082	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_6_GL000253v2_alt	HERV	MER4	oneside	chr6_GL000253v2_alt	786984	792527	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000253v2_alt(c)	HERV	ERV316A3	internal	chr6_GL000253v2_alt	844815	849301	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_6_GL000253v2_alt	HERV	HERVL40	internal	chr6_GL000253v2_alt	948788	949585	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000253v2_alt(d)	HERV	ERV316A3	oneside	chr6_GL000253v2_alt	975967	980281	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000253v2_alt(e)	HERV	ERV316A3	prototype	chr6_GL000253v2_alt	1030415	1035544	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000253v2_alt(f)	HERV	ERV316A3	oneside	chr6_GL000253v2_alt	1055704	1056927	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000253v2_alt(g)	HERV	ERV316A3	oneside	chr6_GL000253v2_alt	1078451	1081190	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000253v2_alt(h)	HERV	ERV316A3	prototype	chr6_GL000253v2_alt	1130739	1136215	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000253v2_alt(i)	HERV	ERV316A3	internal	chr6_GL000253v2_alt	1148559	1149988	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000253v2_alt(j)	HERV	ERV316A3	prototype	chr6_GL000253v2_alt	1169082	1174547	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000253v2_alt(k)	HERV	ERV316A3	oneside	chr6_GL000253v2_alt	1201478	1204942	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_6_GL000253v2_alt	HERV	HERVP71A	oneside	chr6_GL000253v2_alt	1223240	1231100	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000253v2_alt(l)	HERV	ERV316A3	prototype	chr6_GL000253v2_alt	1258677	1264017	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000253v2_alt(m)	HERV	ERV316A3	internal	chr6_GL000253v2_alt	1586281	1587697	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6_GL000253v2_alt(a)	HERV	ERVLE	internal	chr6_GL000253v2_alt	1690156	1690780	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6_GL000253v2_alt(a)	HERV	HERVL	oneside	chr6_GL000253v2_alt	2276605	2282061	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6_GL000253v2_alt(b)	HERV	ERVLE	internal	chr6_GL000253v2_alt	2347483	2351533	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_6_GL000253v2_alt	HERV	HARLEQUIN	oneside	chr6_GL000253v2_alt	2492388	2497299	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_6_GL000253v2_alt	HERV	HERV3	oneside	chr6_GL000253v2_alt	2536300	2539009	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_6_GL000253v2_alt	HERV	HML3	prototype	chr6_GL000253v2_alt	2542529	2546640	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6_GL000253v2_alt(a)	HERV	ERVLB4	oneside	chr6_GL000253v2_alt	2554062	2555583	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6_GL000253v2_alt(c)	HERV	ERVLE	internal	chr6_GL000253v2_alt	2600440	2601075	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000253v2_alt(n)	HERV	ERV316A3	internal	chr6_GL000253v2_alt	2609522	2610981	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6_GL000253v2_alt(b)	HERV	ERVLB4	oneside	chr6_GL000253v2_alt	2629525	2631037	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6_GL000253v2_alt(c)	HERV	ERVLB4	internal	chr6_GL000253v2_alt	2684937	2685725	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000253v2_alt(o)	HERV	ERV316A3	oneside	chr6_GL000253v2_alt	2692354	2695890	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6_GL000253v2_alt(b)	HERV	HERVL	oneside	chr6_GL000253v2_alt	2737919	2744043	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_6_GL000253v2_alt	HERV	HUERSP2	oneside	chr6_GL000253v2_alt	3679299	3681436	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_6_GL000253v2_alt	HERV	HML6	oneside	chr6_GL000253v2_alt	3779726	3783828	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_6_GL000253v2_alt	HERV	HML1	prototype	chr6_GL000253v2_alt	3947537	3952761	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_6_GL000253v2_alt	HERV	HERV9	internal	chr6_GL000253v2_alt	3983251	3984169	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH19_6_GL000253v2_alt	HERV	HERVFH19	oneside	chr6_GL000253v2_alt	4126773	4128606	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_6_GL000253v2_alt	HERV	HUERSP3	prototype	chr6_GL000253v2_alt	4537481	4544759	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6_GL000253v2_alt(c)	HERV	MER41	internal	chr6_GL000253v2_alt	4554911	4558083	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVS71_6_GL000254v2_alt	HERV	HERVS71	prototype	chr6_GL000254v2_alt	31772	42095	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_6_GL000254v2_alt	HERV	LTR57	prototype	chr6_GL000254v2_alt	133868	141618	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6_GL000254v2_alt(a)	HERV	MER41	internal	chr6_GL000254v2_alt	408218	409001	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6_GL000254v2_alt(b)	HERV	MER41	oneside	chr6_GL000254v2_alt	409007	410244	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000254v2_alt(a)	HERV	ERV316A3	oneside	chr6_GL000254v2_alt	474879	478266	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000254v2_alt(b)	HERV	ERV316A3	internal	chr6_GL000254v2_alt	669727	670967	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_6_GL000254v2_alt	HERV	MER4	oneside	chr6_GL000254v2_alt	787235	792778	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000254v2_alt(c)	HERV	ERV316A3	internal	chr6_GL000254v2_alt	845025	849512	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_6_GL000254v2_alt	HERV	HERVL40	internal	chr6_GL000254v2_alt	949055	949852	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000254v2_alt(d)	HERV	ERV316A3	oneside	chr6_GL000254v2_alt	976213	980373	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000254v2_alt(e)	HERV	ERV316A3	prototype	chr6_GL000254v2_alt	1030486	1035615	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000254v2_alt(f)	HERV	ERV316A3	oneside	chr6_GL000254v2_alt	1055779	1057002	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000254v2_alt(g)	HERV	ERV316A3	oneside	chr6_GL000254v2_alt	1078428	1081167	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000254v2_alt(h)	HERV	ERV316A3	prototype	chr6_GL000254v2_alt	1131052	1136527	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000254v2_alt(i)	HERV	ERV316A3	internal	chr6_GL000254v2_alt	1148966	1150387	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000254v2_alt(j)	HERV	ERV316A3	oneside	chr6_GL000254v2_alt	1169577	1172079	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000254v2_alt(k)	HERV	ERV316A3	oneside	chr6_GL000254v2_alt	1291015	1294517	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_6_GL000254v2_alt	HERV	HERVP71A	oneside	chr6_GL000254v2_alt	1306543	1314409	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000254v2_alt(l)	HERV	ERV316A3	prototype	chr6_GL000254v2_alt	1342007	1347342	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6_GL000254v2_alt(a)	HERV	ERVLE	internal	chr6_GL000254v2_alt	1723966	1724590	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6_GL000254v2_alt	HERV	HERVL	oneside	chr6_GL000254v2_alt	2310513	2315971	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6_GL000254v2_alt(b)	HERV	ERVLE	internal	chr6_GL000254v2_alt	2381107	2385136	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_6_GL000254v2_alt(a)	HERV	HARLEQUIN	oneside	chr6_GL000254v2_alt	2526002	2530913	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_6_GL000254v2_alt	HERV	HERV3	oneside	chr6_GL000254v2_alt	2569985	2572694	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_6_GL000254v2_alt	HERV	HML3	prototype	chr6_GL000254v2_alt	2576214	2580325	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6_GL000254v2_alt(a)	HERV	ERVLB4	oneside	chr6_GL000254v2_alt	2587739	2589271	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6_GL000254v2_alt(c)	HERV	ERVLE	internal	chr6_GL000254v2_alt	2634146	2634781	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000254v2_alt(m)	HERV	ERV316A3	internal	chr6_GL000254v2_alt	2643231	2644690	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6_GL000254v2_alt(b)	HERV	ERVLB4	oneside	chr6_GL000254v2_alt	2663145	2664580	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000254v2_alt(n)	HERV	ERV316A3	oneside	chr6_GL000254v2_alt	2806319	2811015	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVKC4_6_GL000254v2_alt	HERV	HERVKC4	prototype	chr6_GL000254v2_alt	3359466	3365826	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_6_GL000254v2_alt	HERV	HUERSP2	oneside	chr6_GL000254v2_alt	3716088	3718225	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_6_GL000254v2_alt	HERV	HML6	oneside	chr6_GL000254v2_alt	3816357	3820459	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_6_GL000254v2_alt	HERV	HUERSP3	oneside	chr6_GL000254v2_alt	3982001	3984533	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH19_6_GL000254v2_alt	HERV	HERVFH19	oneside	chr6_GL000254v2_alt	4006205	4008038	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_6_GL000254v2_alt	HERV	HML5	oneside	chr6_GL000254v2_alt	4348292	4355579	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6_GL000254v2_alt	HERV	HERVH	oneside	chr6_GL000254v2_alt	4781847	4787738	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_6_GL000254v2_alt(b)	HERV	HARLEQUIN	internal	chr6_GL000254v2_alt	4787819	4791177	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVS71_6_GL000255v2_alt	HERV	HERVS71	prototype	chr6_GL000255v2_alt	31772	42095	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_6_GL000255v2_alt	HERV	LTR57	prototype	chr6_GL000255v2_alt	133855	141451	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6_GL000255v2_alt(a)	HERV	MER41	internal	chr6_GL000255v2_alt	408063	408847	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6_GL000255v2_alt(b)	HERV	MER41	oneside	chr6_GL000255v2_alt	408853	410090	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000255v2_alt(a)	HERV	ERV316A3	oneside	chr6_GL000255v2_alt	474743	478140	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6_GL000255v2_alt(a)	HERV	HERVH	oneside	chr6_GL000255v2_alt	511071	516303	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_6_GL000255v2_alt	HERV	MER4	oneside	chr6_GL000255v2_alt	787324	792867	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000255v2_alt(b)	HERV	ERV316A3	internal	chr6_GL000255v2_alt	845143	849629	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_6_GL000255v2_alt	HERV	HERVL40	internal	chr6_GL000255v2_alt	949178	949975	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000255v2_alt(c)	HERV	ERV316A3	oneside	chr6_GL000255v2_alt	976353	980668	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000255v2_alt(d)	HERV	ERV316A3	prototype	chr6_GL000255v2_alt	1030793	1035936	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000255v2_alt(e)	HERV	ERV316A3	oneside	chr6_GL000255v2_alt	1056090	1057315	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000255v2_alt(f)	HERV	ERV316A3	oneside	chr6_GL000255v2_alt	1078722	1081461	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000255v2_alt(g)	HERV	ERV316A3	prototype	chr6_GL000255v2_alt	1131162	1136638	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000255v2_alt(h)	HERV	ERV316A3	internal	chr6_GL000255v2_alt	1148986	1150415	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000255v2_alt(i)	HERV	ERV316A3	prototype	chr6_GL000255v2_alt	1169586	1175046	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000255v2_alt(j)	HERV	ERV316A3	oneside	chr6_GL000255v2_alt	1201891	1205436	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_6_GL000255v2_alt	HERV	HERVP71A	oneside	chr6_GL000255v2_alt	1217473	1225349	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000255v2_alt(k)	HERV	ERV316A3	prototype	chr6_GL000255v2_alt	1252951	1258349	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000255v2_alt(l)	HERV	ERV316A3	internal	chr6_GL000255v2_alt	1531153	1532568	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6_GL000255v2_alt(a)	HERV	ERVLE	internal	chr6_GL000255v2_alt	1635008	1635632	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6_GL000255v2_alt	HERV	HERVL	oneside	chr6_GL000255v2_alt	2221527	2226983	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6_GL000255v2_alt(b)	HERV	ERVLE	internal	chr6_GL000255v2_alt	2292603	2296654	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_6_GL000255v2_alt(a)	HERV	HARLEQUIN	oneside	chr6_GL000255v2_alt	2439910	2444814	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_6_GL000255v2_alt	HERV	HERV3	oneside	chr6_GL000255v2_alt	2483850	2485401	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_6_GL000255v2_alt	HERV	HML3	prototype	chr6_GL000255v2_alt	2488917	2493034	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6_GL000255v2_alt(a)	HERV	ERVLB4	oneside	chr6_GL000255v2_alt	2500450	2501989	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000255v2_alt(m)	HERV	ERV316A3	internal	chr6_GL000255v2_alt	2556205	2557647	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6_GL000255v2_alt(b)	HERV	ERVLB4	oneside	chr6_GL000255v2_alt	2576112	2577602	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6_GL000255v2_alt(c)	HERV	ERVLB4	internal	chr6_GL000255v2_alt	2632023	2632813	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000255v2_alt(n)	HERV	ERV316A3	oneside	chr6_GL000255v2_alt	2639422	2642965	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVKC4_6_GL000255v2_alt	HERV	HERVKC4	prototype	chr6_GL000255v2_alt	3240663	3247024	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_6_GL000255v2_alt	HERV	HUERSP2	oneside	chr6_GL000255v2_alt	3597360	3599497	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_6_GL000255v2_alt(a)	HERV	HML6	oneside	chr6_GL000255v2_alt	3698586	3702689	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_6_GL000255v2_alt	HERV	HERV9	prototype	chr6_GL000255v2_alt	3736862	3742294	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_6_GL000255v2_alt(b)	HERV	HML6	oneside	chr6_GL000255v2_alt	3756789	3762046	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH19_6_GL000255v2_alt	HERV	HERVFH19	oneside	chr6_GL000255v2_alt	3901232	3903072	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_6_GL000255v2_alt	HERV	HML5	oneside	chr6_GL000255v2_alt	4243517	4250800	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_6_GL000255v2_alt	HERV	HUERSP3	prototype	chr6_GL000255v2_alt	4312412	4319690	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6_GL000255v2_alt(c)	HERV	MER41	internal	chr6_GL000255v2_alt	4329842	4333014	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6_GL000255v2_alt(b)	HERV	HERVH	oneside	chr6_GL000255v2_alt	4540337	4546227	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_6_GL000255v2_alt(b)	HERV	HARLEQUIN	internal	chr6_GL000255v2_alt	4546308	4549668	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6_GL000256v2_alt(a)	HERV	ERVLE	internal	chr6_GL000256v2_alt	12921	14063	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVS71_6_GL000256v2_alt	HERV	HERVS71	prototype	chr6_GL000256v2_alt	75543	85878	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_6_GL000256v2_alt	HERV	LTR57	prototype	chr6_GL000256v2_alt	177520	185270	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6_GL000256v2_alt(a)	HERV	MER41	internal	chr6_GL000256v2_alt	451841	452625	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_6_GL000256v2_alt(b)	HERV	MER41	oneside	chr6_GL000256v2_alt	452631	453868	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000256v2_alt(a)	HERV	ERV316A3	oneside	chr6_GL000256v2_alt	518539	521926	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_6_GL000256v2_alt	HERV	HERVH	prototype	chr6_GL000256v2_alt	554874	562205	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000256v2_alt(b)	HERV	ERV316A3	internal	chr6_GL000256v2_alt	713373	714957	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_6_GL000256v2_alt	HERV	MER4	oneside	chr6_GL000256v2_alt	830869	836412	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_6_GL000256v2_alt	HERV	HERVL40	internal	chr6_GL000256v2_alt	992712	993509	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000256v2_alt(c)	HERV	ERV316A3	oneside	chr6_GL000256v2_alt	1019904	1024065	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000256v2_alt(d)	HERV	ERV316A3	prototype	chr6_GL000256v2_alt	1073971	1079116	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000256v2_alt(e)	HERV	ERV316A3	oneside	chr6_GL000256v2_alt	1099279	1100502	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000256v2_alt(f)	HERV	ERV316A3	oneside	chr6_GL000256v2_alt	1121992	1124731	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000256v2_alt(g)	HERV	ERV316A3	prototype	chr6_GL000256v2_alt	1174127	1179599	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000256v2_alt(h)	HERV	ERV316A3	internal	chr6_GL000256v2_alt	1191943	1193372	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000256v2_alt(i)	HERV	ERV316A3	prototype	chr6_GL000256v2_alt	1212476	1217946	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000256v2_alt(j)	HERV	ERV316A3	oneside	chr6_GL000256v2_alt	1244750	1248212	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_6_GL000256v2_alt	HERV	HERVP71A	oneside	chr6_GL000256v2_alt	1260299	1268161	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000256v2_alt(k)	HERV	ERV316A3	prototype	chr6_GL000256v2_alt	1295757	1301093	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000256v2_alt(l)	HERV	ERV316A3	internal	chr6_GL000256v2_alt	1574521	1575935	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6_GL000256v2_alt(b)	HERV	ERVLE	internal	chr6_GL000256v2_alt	1678378	1679002	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6_GL000256v2_alt(c)	HERV	ERVLE	internal	chr6_GL000256v2_alt	2337702	2341753	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_6_GL000256v2_alt	HERV	HARLEQUIN	oneside	chr6_GL000256v2_alt	2485292	2490196	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_6_GL000256v2_alt	HERV	HERV3	oneside	chr6_GL000256v2_alt	2529184	2531893	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_6_GL000256v2_alt	HERV	HML3	prototype	chr6_GL000256v2_alt	2535420	2539537	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6_GL000256v2_alt(a)	HERV	ERVLB4	oneside	chr6_GL000256v2_alt	2546968	2548504	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000256v2_alt(m)	HERV	ERV316A3	internal	chr6_GL000256v2_alt	2602731	2604173	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6_GL000256v2_alt(b)	HERV	ERVLB4	oneside	chr6_GL000256v2_alt	2622637	2624143	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_6_GL000256v2_alt(c)	HERV	ERVLB4	internal	chr6_GL000256v2_alt	2678553	2679341	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000256v2_alt(n)	HERV	ERV316A3	oneside	chr6_GL000256v2_alt	2686010	2689547	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6_GL000256v2_alt	HERV	HERVL	oneside	chr6_GL000256v2_alt	2732107	2738223	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL000256v2_alt(o)	HERV	ERV316A3	prototype	chr6_GL000256v2_alt	2762669	2768837	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVKC4_6_GL000256v2_alt(a)	HERV	HERVKC4	prototype	chr6_GL000256v2_alt	3285881	3292241	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVKC4_6_GL000256v2_alt(b)	HERV	HERVKC4	prototype	chr6_GL000256v2_alt	3318619	3324979	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_6_GL000256v2_alt	HERV	HUERSP2	oneside	chr6_GL000256v2_alt	3690260	3692397	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_6_GL000256v2_alt	HERV	HML6	oneside	chr6_GL000256v2_alt	3790756	3794858	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_6_GL000256v2_alt	HERV	HML1	prototype	chr6_GL000256v2_alt	3937748	3942973	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_6_GL000256v2_alt	HERV	HERV9	internal	chr6_GL000256v2_alt	3973441	3974357	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFH19_6_GL000256v2_alt	HERV	HERVFH19	oneside	chr6_GL000256v2_alt	4107596	4109428	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_6_GL000256v2_alt	HERV	HML5	oneside	chr6_GL000256v2_alt	4498248	4505536	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_6_GL000256v2_alt	HERV	HUERSP3	prototype	chr6_GL000256v2_alt	4566705	4573983	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_GL383533v1_alt	HERV	ERV316A3	internal	chr6_GL383533v1_alt	65355	65860	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6_KI270797v1_alt	HERV	ERVLE	internal	chr6_KI270797v1_alt	58992	61718	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_6_KI270797v1_alt	HERV	MER4	prototype	chr6_KI270797v1_alt	94371	97278	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_6_KI270798v1_alt	HERV	MER101	prototype	chr6_KI270798v1_alt	163129	169727	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_6_KI270798v1_alt	HERV	LTR57	internal	chr6_KI270798v1_alt	167224	168237	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6_KI270799v1_alt	HERV	HERVL	oneside	chr6_KI270799v1_alt	103148	105589	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_6_KI270800v1_alt	HERV	MER34B	oneside	chr6_KI270800v1_alt	170899	172821	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_6_KI270801v1_alt	HERV	ERV316A3	oneside	chr6_KI270801v1_alt	49370	51276	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_6_KI270801v1_alt	HERV	HERVL	oneside	chr6_KI270801v1_alt	145726	148059	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_6_KI270801v1_alt	HERV	ERVLE	internal	chr6_KI270801v1_alt	299060	300395	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL32_6_KI270802v1_alt	HERV	HERVL32	oneside	chr6_KI270802v1_alt	49825	51723	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_7_KI270803v1_alt	HERV	MER41	prototype	chr7_KI270803v1_alt	706344	711553	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7_KI270803v1_alt	HERV	ERVLB4	internal	chr7_KI270803v1_alt	743782	745403	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7_KI270803v1_alt	HERV	ERVLE	internal	chr7_KI270803v1_alt	863602	864790	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_7_KI270803v1_alt	HERV	ERV316A3	oneside	chr7_KI270803v1_alt	1036216	1038228	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7_KI270804v1_alt	HERV	ERVLE	internal	chr7_KI270804v1_alt	23330	24113	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_7_KI270805v1_alt	HERV	ERVLB4	internal	chr7_KI270805v1_alt	160784	163050	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_7_KI270806v1_alt	HERV	HERVIP10FH	internal	chr7_KI270806v1_alt	88214	91433	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_7_KI270808v1_alt	HERV	HERVH	prototype	chr7_KI270808v1_alt	94543	100742	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER34B_7_KI270809v1_alt	HERV	MER34B	internal	chr7_KI270809v1_alt	89357	91020	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR23_7_KI270809v1_alt	HERV	LTR23	internal	chr7_KI270809v1_alt	110707	111100	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_7_KI270899v1_alt	HERV	ERVLE	internal	chr7_KI270899v1_alt	59552	60335	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_8_KI270810v1_alt(a)	HERV	HERVH	prototype	chr8_KI270810v1_alt	57179	62908	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_8_KI270810v1_alt(b)	HERV	HERVH	prototype	chr8_KI270810v1_alt	363134	368995	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_8_KI270813v1_alt	HERV	HERVH	prototype	chr8_KI270813v1_alt	85346	91227	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_8_KI270813v1_alt(a)	HERV	HML2	oneside	chr8_KI270813v1_alt	180978	185867	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_8_KI270813v1_alt(b)	HERV	HML2	oneside	chr8_KI270813v1_alt	185912	190440	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_8_KI270813v1_alt(a)	HERV	MER4B	internal	chr8_KI270813v1_alt	213590	217281	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_8_KI270813v1_alt(b)	HERV	MER4B	internal	chr8_KI270813v1_alt	217653	218594	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_8_KI270813v1_alt	HERV	HERVE	internal	chr8_KI270813v1_alt	270651	274703	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8_KI270813v1_alt(a)	HERV	ERVLB4	internal	chr8_KI270813v1_alt	292193	292741	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8_KI270813v1_alt(b)	HERV	ERVLB4	internal	chr8_KI270813v1_alt	298322	298890	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_8_KI270814v1_alt(a)	HERV	HERVFRD	oneside	chr8_KI270814v1_alt	29163	30630	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_8_KI270814v1_alt(b)	HERV	HERVFRD	oneside	chr8_KI270814v1_alt	35906	37355	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_8_KI270814v1_alt(c)	HERV	HERVFRD	oneside	chr8_KI270814v1_alt	41287	42736	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_8_KI270814v1_alt(d)	HERV	HERVFRD	oneside	chr8_KI270814v1_alt	46668	48117	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_8_KI270814v1_alt(e)	HERV	HERVFRD	oneside	chr8_KI270814v1_alt	52049	53499	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_8_KI270814v1_alt(f)	HERV	HERVFRD	unknown	chr8_KI270814v1_alt	57418	60617	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_8_KI270814v1_alt	HERV	HUERSP3	oneside	chr8_KI270814v1_alt	60814	63193	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVFRD_8_KI270814v1_alt(g)	HERV	HERVFRD	oneside	chr8_KI270814v1_alt	135828	138077	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8_KI270816v1_alt	HERV	ERV316A3	internal	chr8_KI270816v1_alt	141533	142502	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_8_KI270816v1_alt	HERV	HARLEQUIN	oneside	chr8_KI270816v1_alt	152515	157434	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8_KI270816v1_alt	HERV	ERVLB4	internal	chr8_KI270816v1_alt	221403	222439	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8_KI270816v1_alt	HERV	ERVLE	internal	chr8_KI270816v1_alt	232154	237234	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_8_KI270817v1_alt	HERV	PRIMA41	internal	chr8_KI270817v1_alt	40351	43584	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLB_8_KI270817v1_alt	HERV	PABLB	internal	chr8_KI270817v1_alt	53298	55959	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8_KI270817v1_alt	HERV	ERVLE	internal	chr8_KI270817v1_alt	98503	100643	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_8_KI270817v1_alt	HERV	MER4B	internal	chr8_KI270817v1_alt	104542	109632	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8_KI270821v1_alt	HERV	ERVLB4	internal	chr8_KI270821v1_alt	143558	144261	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8_KI270821v1_alt(a)	HERV	ERVLE	internal	chr8_KI270821v1_alt	525385	526568	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8_KI270821v1_alt	HERV	ERV316A3	internal	chr8_KI270821v1_alt	889953	890735	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8_KI270821v1_alt(b)	HERV	ERVLE	internal	chr8_KI270821v1_alt	953119	954254	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8_KI270822v1_alt(a)	HERV	ERVLE	internal	chr8_KI270822v1_alt	19008	20361	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_8_KI270822v1_alt(b)	HERV	ERVLE	internal	chr8_KI270822v1_alt	89256	91317	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_8_KI270822v1_alt	HERV	HUERSP3	oneside	chr8_KI270822v1_alt	231775	236327	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8_KI270822v1_alt(a)	HERV	ERV316A3	oneside	chr8_KI270822v1_alt	421397	423652	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_8_KI270822v1_alt(b)	HERV	ERV316A3	prototype	chr8_KI270822v1_alt	525523	527084	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_8_KI270822v1_alt	HERV	ERVLB4	oneside	chr8_KI270822v1_alt	570077	571286	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_8_KI270822v1_alt	HERV	HERVIP10F	oneside	chr8_KI270822v1_alt	598836	603745	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_8_KI270822v1_alt	HERV	HML3	oneside	chr8_KI270822v1_alt	621021	624459	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_9_GL383539v1_alt(a)	HERV	ERVLE	internal	chr9_GL383539v1_alt	4376	6724	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_9_GL383539v1_alt(b)	HERV	ERVLE	internal	chr9_GL383539v1_alt	25307	27655	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_9_KI270823v1_alt	HERV	MER41	oneside	chr9_KI270823v1_alt	167382	168861	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_9_KI270823v1_alt	HERV	HML1	prototype	chr9_KI270823v1_alt	174637	179061	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_9_KI270823v1_alt	HERV	HERVL	oneside	chr9_KI270823v1_alt	229224	231488	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR19_10_GL383546v1_alt	HERV	LTR19	oneside	chr10_GL383546v1_alt	99280	103740	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_10_GL383546v1_alt	HERV	HML6	prototype	chr10_GL383546v1_alt	103744	111673	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_10_GL383546v1_alt(a)	HERV	HERVL	oneside	chr10_GL383546v1_alt	161283	166231	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_10_GL383546v1_alt(b)	HERV	HERVL	oneside	chr10_GL383546v1_alt	171759	173346	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_10_KI270824v1_alt	HERV	HERVL	prototype	chr10_KI270824v1_alt	84624	88630	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10_KI270824v1_alt(a)	HERV	ERV316A3	oneside	chr10_KI270824v1_alt	167836	169391	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_10_KI270824v1_alt(b)	HERV	ERV316A3	internal	chr10_KI270824v1_alt	172238	173554	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11_GL383547v1_alt	HERV	ERV316A3	oneside	chr11_GL383547v1_alt	7080	12472	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_11_JH159136v1_alt	HERV	ERVLB4	oneside	chr11_JH159136v1_alt	122208	125713	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_11_JH159136v1_alt	HERV	HML1	prototype	chr11_JH159136v1_alt	138594	143974	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_11_JH159137v1_alt(a)	HERV	MER101	internal	chr11_JH159137v1_alt	46167	48207	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_11_JH159137v1_alt(b)	HERV	MER101	internal	chr11_JH159137v1_alt	48508	51385	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_11_JH159137v1_alt(c)	HERV	MER101	oneside	chr11_JH159137v1_alt	51703	53653	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11_JH159137v1_alt	HERV	ERV316A3	oneside	chr11_JH159137v1_alt	132405	134779	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11_JH159137v1_alt	HERV	ERVLE	internal	chr11_JH159137v1_alt	155035	158168	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_11_JH159137v1_alt	HERV	MER4	prototype	chr11_JH159137v1_alt	182744	190590	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11_KI270826v1_alt	HERV	ERV316A3	internal	chr11_KI270826v1_alt	68717	69887	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_11_KI270829v1_alt	HERV	ERVLE	internal	chr11_KI270829v1_alt	65635	66733	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_11_KI270829v1_alt	HERV	HML6	prototype	chr11_KI270829v1_alt	130826	137733	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_11_KI270829v1_alt	HERV	HERVH	prototype	chr11_KI270829v1_alt	143652	149408	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_11_KI270829v1_alt	HERV	MER4	oneside	chr11_KI270829v1_alt	199959	202742	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_11_KI270903v1_alt	HERV	ERV316A3	oneside	chr11_KI270903v1_alt	188321	189494	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_11_KI270927v1_alt	HERV	ERVLB4	internal	chr11_KI270927v1_alt	133819	134435	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12_GL383549v1_alt	HERV	ERVLE	internal	chr12_GL383549v1_alt	30412	31430	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12_GL383550v2_alt	HERV	ERVLE	oneside	chr12_GL383550v2_alt	33038	35437	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVP71A_12_GL877875v1_alt	HERV	HERVP71A	oneside	chr12_GL877875v1_alt	101139	106471	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12_GL877876v1_alt(a)	HERV	ERVLB4	internal	chr12_GL877876v1_alt	159027	159962	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12_GL877876v1_alt(a)	HERV	ERVLE	internal	chr12_GL877876v1_alt	179773	181943	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_12_GL877876v1_alt	HERV	ERVL	internal	chr12_GL877876v1_alt	190786	192661	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12_GL877876v1_alt(a)	HERV	HERVL	internal	chr12_GL877876v1_alt	215407	216831	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12_GL877876v1_alt(b)	HERV	ERVLB4	internal	chr12_GL877876v1_alt	225111	226574	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12_GL877876v1_alt(c)	HERV	ERVLB4	internal	chr12_GL877876v1_alt	256081	257516	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12_GL877876v1_alt(b)	HERV	HERVL	internal	chr12_GL877876v1_alt	269441	272479	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12_GL877876v1_alt(d)	HERV	ERVLB4	internal	chr12_GL877876v1_alt	286178	287652	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12_GL877876v1_alt(e)	HERV	ERVLB4	internal	chr12_GL877876v1_alt	306434	310276	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12_GL877876v1_alt(c)	HERV	HERVL	internal	chr12_GL877876v1_alt	323881	325191	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12_GL877876v1_alt(b)	HERV	ERVLE	internal	chr12_GL877876v1_alt	359940	361271	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12_GL877876v1_alt(c)	HERV	ERVLE	internal	chr12_GL877876v1_alt	383610	384571	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_12_KI270835v1_alt(a)	HERV	PRIMA4	internal	chr12_KI270835v1_alt	194030	198109	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA4_12_KI270835v1_alt(b)	HERV	PRIMA4	internal	chr12_KI270835v1_alt	198365	205845	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12_KI270904v1_alt(a)	HERV	ERVLB4	internal	chr12_KI270904v1_alt	159027	159962	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12_KI270904v1_alt(a)	HERV	ERVLE	internal	chr12_KI270904v1_alt	179764	181929	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_12_KI270904v1_alt	HERV	ERVL	internal	chr12_KI270904v1_alt	190773	192648	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12_KI270904v1_alt(a)	HERV	HERVL	internal	chr12_KI270904v1_alt	215396	216824	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12_KI270904v1_alt(b)	HERV	ERVLB4	internal	chr12_KI270904v1_alt	225030	226873	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12_KI270904v1_alt(c)	HERV	ERVLB4	internal	chr12_KI270904v1_alt	258239	259674	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_12_KI270904v1_alt(d)	HERV	ERVLB4	internal	chr12_KI270904v1_alt	270816	274662	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_12_KI270904v1_alt(b)	HERV	HERVL	internal	chr12_KI270904v1_alt	288243	289553	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12_KI270904v1_alt(b)	HERV	ERVLE	internal	chr12_KI270904v1_alt	324316	325700	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_12_KI270904v1_alt(c)	HERV	ERVLE	internal	chr12_KI270904v1_alt	347921	348882	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_12_KI270904v1_alt	HERV	HERVL40	internal	chr12_KI270904v1_alt	565728	567212	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_13_KI270838v1_alt	HERV	ERVLB4	oneside	chr13_KI270838v1_alt	4669	5910	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_13_KI270838v1_alt	HERV	HUERSP1	prototype	chr13_KI270838v1_alt	182496	190279	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_13_KI270841v1_alt	HERV	HERVL	oneside	chr13_KI270841v1_alt	4763	6738	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLB_13_KI270841v1_alt	HERV	PABLB	internal	chr13_KI270841v1_alt	56374	62622	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_13_KI270843v1_alt	HERV	HERVL40	internal	chr13_KI270843v1_alt	22086	26162	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_14_KI270844v1_alt(a)	HERV	MER4	internal	chr14_KI270844v1_alt	58796	59480	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_14_KI270844v1_alt(b)	HERV	MER4	oneside	chr14_KI270844v1_alt	59603	64122	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR57_14_KI270844v1_alt	HERV	LTR57	internal	chr14_KI270844v1_alt	146053	146965	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_14_KI270844v1_alt	HERV	PRIMA41	internal	chr14_KI270844v1_alt	147646	150816	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14_KI270844v1_alt	HERV	ERVLE	oneside	chr14_KI270844v1_alt	212553	213753	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_14_KI270845v1_alt	HERV	ERVLB4	prototype	chr14_KI270845v1_alt	13894	20398	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14_KI270845v1_alt(a)	HERV	ERVLE	internal	chr14_KI270845v1_alt	77877	79857	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14_KI270845v1_alt(b)	HERV	ERVLE	internal	chr14_KI270845v1_alt	115985	116406	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_14_KI270845v1_alt	HERV	ERV316A3	internal	chr14_KI270845v1_alt	166464	167758	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_14_KI270846v1_alt	HERV	HML2	oneside	chr14_KI270846v1_alt	141082	143972	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_14_KI270846v1_alt(a)	HERV	HERVL	oneside	chr14_KI270846v1_alt	432955	434749	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL32_14_KI270846v1_alt(a)	HERV	HERVL32	internal	chr14_KI270846v1_alt	449711	451436	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL32_14_KI270846v1_alt(b)	HERV	HERVL32	oneside	chr14_KI270846v1_alt	451698	453105	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_14_KI270846v1_alt	HERV	HUERSP1	internal	chr14_KI270846v1_alt	520096	521352	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_14_KI270846v1_alt(b)	HERV	HERVL	oneside	chr14_KI270846v1_alt	564069	565644	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_14_KI270846v1_alt(a)	HERV	MER4B	internal	chr14_KI270846v1_alt	576818	578142	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_14_KI270846v1_alt(a)	HERV	MER4	oneside	chr14_KI270846v1_alt	603251	608273	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVS71_14_KI270846v1_alt	HERV	HERVS71	prototype	chr14_KI270846v1_alt	664760	675241	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_14_KI270846v1_alt(a)	HERV	PRIMA41	internal	chr14_KI270846v1_alt	896097	897187	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_14_KI270846v1_alt(b)	HERV	MER4	oneside	chr14_KI270846v1_alt	903102	908530	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_14_KI270846v1_alt(b)	HERV	MER4B	internal	chr14_KI270846v1_alt	957168	957893	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_14_KI270846v1_alt(b)	HERV	PRIMA41	internal	chr14_KI270846v1_alt	977047	979733	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_14_KI270846v1_alt(c)	HERV	MER4	unknown	chr14_KI270846v1_alt	1014472	1021301	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_14_KI270846v1_alt	HERV	ERVLB4	oneside	chr14_KI270846v1_alt	1059078	1060234	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_14_KI270846v1_alt(c)	HERV	MER4B	internal	chr14_KI270846v1_alt	1071794	1072458	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_14_KI270846v1_alt(a)	HERV	LTR25	internal	chr14_KI270846v1_alt	1086290	1087156	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_14_KI270846v1_alt(b)	HERV	LTR25	internal	chr14_KI270846v1_alt	1137066	1137845	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_14_KI270846v1_alt(a)	HERV	HML5	prototype	chr14_KI270846v1_alt	1189673	1194804	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML5_14_KI270846v1_alt(b)	HERV	HML5	prototype	chr14_KI270846v1_alt	1236144	1241250	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL32_14_KI270846v1_alt(c)	HERV	HERVL32	oneside	chr14_KI270846v1_alt	1283259	1284587	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_14_KI270846v1_alt(c)	HERV	HERVL	oneside	chr14_KI270846v1_alt	1323988	1325247	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_14_KI270846v1_alt	HERV	HERV3	prototype	chr14_KI270846v1_alt	1327235	1337155	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_14_KI270846v1_alt(d)	HERV	MER4B	internal	chr14_KI270846v1_alt	1343792	1344633	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_14_KI270847v1_alt	HERV	HERVL	oneside	chr14_KI270847v1_alt	471851	475903	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_14_KI270847v1_alt	HERV	HERVH	prototype	chr14_KI270847v1_alt	673954	679532	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_14_KI270847v1_alt	HERV	ERVLE	internal	chr14_KI270847v1_alt	907200	909146	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_14_KI270847v1_alt	HERV	MER41	oneside	chr14_KI270847v1_alt	1203669	1207266	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_15_KI270849v1_alt(a)	HERV	HERV9	oneside	chr15_KI270849v1_alt	193854	197651	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_15_KI270849v1_alt(b)	HERV	HERV9	oneside	chr15_KI270849v1_alt	204166	208239	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_15_KI270849v1_alt	HERV	HUERSP1	prototype	chr15_KI270849v1_alt	208529	215263	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVI_15_KI270850v1_alt(a)	HERV	HERVI	prototype	chr15_KI270850v1_alt	72045	81026	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVI_15_KI270850v1_alt(b)	HERV	HERVI	prototype	chr15_KI270850v1_alt	276132	285134	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_15_KI270852v1_alt	HERV	MER4	internal	chr15_KI270852v1_alt	161920	162859	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15_KI270852v1_alt	HERV	ERV316A3	internal	chr15_KI270852v1_alt	351247	351963	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_15_KI270852v1_alt	HERV	HERVL74	oneside	chr15_KI270852v1_alt	460838	464613	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL32_15_KI270852v1_alt	HERV	HERVL32	internal	chr15_KI270852v1_alt	478159	478998	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15_KI270905v1_alt(a)	HERV	ERVLE	internal	chr15_KI270905v1_alt	33892	35235	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15_KI270905v1_alt(a)	HERV	ERVLB4	internal	chr15_KI270905v1_alt	2594445	2598599	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15_KI270905v1_alt(b)	HERV	ERVLE	internal	chr15_KI270905v1_alt	2604338	2607621	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15_KI270905v1_alt(b)	HERV	ERVLB4	oneside	chr15_KI270905v1_alt	2749783	2752768	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_15_KI270905v1_alt(a)	HERV	HERVL74	internal	chr15_KI270905v1_alt	3140525	3141276	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_15_KI270905v1_alt(b)	HERV	HERVL74	internal	chr15_KI270905v1_alt	3141682	3146389	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15_KI270905v1_alt(c)	HERV	ERVLB4	oneside	chr15_KI270905v1_alt	3150422	3153097	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15_KI270905v1_alt(d)	HERV	ERVLB4	oneside	chr15_KI270905v1_alt	3153116	3158678	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR23_15_KI270905v1_alt	HERV	LTR23	internal	chr15_KI270905v1_alt	3424991	3427564	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15_KI270905v1_alt(a)	HERV	ERV316A3	internal	chr15_KI270905v1_alt	3526882	3528324	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15_KI270905v1_alt(b)	HERV	ERV316A3	internal	chr15_KI270905v1_alt	3561954	3564201	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15_KI270905v1_alt(e)	HERV	ERVLB4	prototype	chr15_KI270905v1_alt	3733913	3736684	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15_KI270905v1_alt(c)	HERV	ERVLE	internal	chr15_KI270905v1_alt	3753416	3758700	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_15_KI270905v1_alt	HERV	HERVIP10FH	prototype	chr15_KI270905v1_alt	3790813	3798136	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15_KI270905v1_alt(d)	HERV	ERVLE	internal	chr15_KI270905v1_alt	3869294	3870343	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_15_KI270905v1_alt	HERV	HERVL	internal	chr15_KI270905v1_alt	4219845	4222958	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_15_KI270905v1_alt(e)	HERV	ERVLE	internal	chr15_KI270905v1_alt	4493552	4496844	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15_KI270905v1_alt(f)	HERV	ERVLB4	oneside	chr15_KI270905v1_alt	4508988	4514873	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_15_KI270905v1_alt(g)	HERV	ERVLB4	oneside	chr15_KI270905v1_alt	4720829	4723814	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_16_GL383556v1_alt(a)	HERV	ERV316A3	internal	chr16_GL383556v1_alt	106182	108049	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_16_GL383556v1_alt(b)	HERV	ERV316A3	oneside	chr16_GL383556v1_alt	108100	109729	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_16_GL383556v1_alt(c)	HERV	ERV316A3	internal	chr16_GL383556v1_alt	109732	111360	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_16_KI270853v1_alt	HERV	MER101	internal	chr16_KI270853v1_alt	1041057	1042159	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_16_KI270853v1_alt	HERV	ERV316A3	prototype	chr16_KI270853v1_alt	2464607	2466054	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_16_KI270853v1_alt	HERV	ERVLB4	internal	chr16_KI270853v1_alt	2585154	2587437	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_17_GL000258v2_alt	HERV	ERV316A3	internal	chr17_GL000258v2_alt	899435	906699	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_17_GL000258v2_alt(a)	HERV	ERVLE	internal	chr17_GL000258v2_alt	1196354	1199211	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_17_GL000258v2_alt(b)	HERV	ERVLE	internal	chr17_GL000258v2_alt	1469788	1472646	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_17_GL383565v1_alt	HERV	ERVLE	internal	chr17_GL383565v1_alt	79001	82728	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_17_GL383565v1_alt	HERV	ERV316A3	oneside	chr17_GL383565v1_alt	120479	122288	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_17_JH159146v1_alt	HERV	ERVLE	internal	chr17_JH159146v1_alt	168977	173825	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_17_JH159146v1_alt(a)	HERV	MER4	oneside	chr17_JH159146v1_alt	237117	238598	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_17_JH159146v1_alt(b)	HERV	MER4	oneside	chr17_JH159146v1_alt	238679	245421	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_17_JH159146v1_alt(c)	HERV	MER4	oneside	chr17_JH159146v1_alt	257171	258659	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_17_JH159146v1_alt(d)	HERV	MER4	oneside	chr17_JH159146v1_alt	258740	265804	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_17_KI270857v1_alt	HERV	HUERSP2	prototype	chr17_KI270857v1_alt	242400	247156	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_17_KI270857v1_alt	HERV	ERV316A3	internal	chr17_KI270857v1_alt	296286	298057	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_17_KI270857v1_alt(a)	HERV	HERVL	prototype	chr17_KI270857v1_alt	346415	351265	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_17_KI270857v1_alt	HERV	ERVLB4	internal	chr17_KI270857v1_alt	366849	367816	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_17_KI270857v1_alt	HERV	ERVLE	internal	chr17_KI270857v1_alt	377972	379566	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_17_KI270857v1_alt(b)	HERV	HERVL	oneside	chr17_KI270857v1_alt	452226	457390	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_17_KI270857v1_alt	HERV	HERVW	oneside	chr17_KI270857v1_alt	1568955	1572687	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_17_KI270860v1_alt	HERV	ERVLB4	internal	chr17_KI270860v1_alt	82657	83252	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_17_KI270862v1_alt(a)	HERV	ERVLB4	internal	chr17_KI270862v1_alt	25338	26617	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_17_KI270862v1_alt(b)	HERV	ERVLB4	oneside	chr17_KI270862v1_alt	26841	28201	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_17_KI270908v1_alt	HERV	ERV316A3	internal	chr17_KI270908v1_alt	579957	590943	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_17_KI270909v1_alt	HERV	ERV316A3	internal	chr17_KI270909v1_alt	15496	17266	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_17_KI270909v1_alt(a)	HERV	HERVL	prototype	chr17_KI270909v1_alt	65591	70441	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_17_KI270909v1_alt	HERV	ERVLB4	internal	chr17_KI270909v1_alt	86036	87003	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_17_KI270909v1_alt	HERV	ERVLE	internal	chr17_KI270909v1_alt	97156	98750	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_17_KI270909v1_alt(b)	HERV	HERVL	oneside	chr17_KI270909v1_alt	171511	176661	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_17_KI270909v1_alt(c)	HERV	HERVL	oneside	chr17_KI270909v1_alt	273078	278228	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_17_KI270910v1_alt(a)	HERV	ERVLB4	internal	chr17_KI270910v1_alt	25338	26617	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_17_KI270910v1_alt(b)	HERV	ERVLB4	oneside	chr17_KI270910v1_alt	26841	28201	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVS71_18_GL383567v1_alt	HERV	HERVS71	prototype	chr18_GL383567v1_alt	108258	116537	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18_GL383567v1_alt	HERV	ERVLE	internal	chr18_GL383567v1_alt	153602	155291	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVW_18_GL383567v1_alt	HERV	HERVW	prototype	chr18_GL383567v1_alt	156974	164931	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_18_GL383567v1_alt	HERV	MER41	oneside	chr18_GL383567v1_alt	258721	260161	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18_GL383568v1_alt(a)	HERV	ERVLE	internal	chr18_GL383568v1_alt	63348	64225	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18_GL383568v1_alt(b)	HERV	ERVLE	internal	chr18_GL383568v1_alt	73139	74876	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH48_18_GL383570v1_alt(a)	HERV	HERVH48	oneside	chr18_GL383570v1_alt	111459	114909	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH48_18_GL383570v1_alt(b)	HERV	HERVH48	oneside	chr18_GL383570v1_alt	121748	125026	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_18_GL383571v1_alt	HERV	HERVL40	oneside	chr18_GL383571v1_alt	2008	4011	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_18_GL383571v1_alt	HERV	ERV316A3	internal	chr18_GL383571v1_alt	37306	39569	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18_GL383572v1_alt	HERV	ERVLE	oneside	chr18_GL383572v1_alt	124263	127526	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_18_KI270863v1_alt	HERV	MER101	oneside	chr18_KI270863v1_alt	107217	111748	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18_KI270864v1_alt	HERV	ERVLE	internal	chr18_KI270864v1_alt	106102	106978	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_18_KI270911v1_alt	HERV	ERVLE	oneside	chr18_KI270911v1_alt	122426	125689	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_19_GL383573v1_alt	HERV	HML1	oneside	chr19_GL383573v1_alt	48038	50198	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVE_19_GL383573v1_alt	HERV	HERVE	prototype	chr19_GL383573v1_alt	83680	92492	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL66_19_GL383573v1_alt	HERV	HERVL66	prototype	chr19_GL383573v1_alt	107478	112291	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10FH_19_GL383573v1_alt	HERV	HERVIP10FH	oneside	chr19_GL383573v1_alt	200867	205790	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_19_GL383573v1_alt	HERV	HARLEQUIN	oneside	chr19_GL383573v1_alt	345658	352651	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_19_GL383575v2_alt	HERV	HML2	prototype	chr19_GL383575v2_alt	10454	19925	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_19_GL383575v2_alt(a)	HERV	HML3	oneside	chr19_GL383575v2_alt	27750	33290	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_19_GL383575v2_alt(b)	HERV	HML3	oneside	chr19_GL383575v2_alt	33350	34599	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_19_GL383575v2_alt(a)	HERV	HUERSP3	oneside	chr19_GL383575v2_alt	41103	45257	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_19_GL383575v2_alt(b)	HERV	HUERSP3	internal	chr19_GL383575v2_alt	45556	49182	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVS71_19_GL383575v2_alt	HERV	HERVS71	prototype	chr19_GL383575v2_alt	49390	59146	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_19_GL383575v2_alt	HERV	MER41	prototype	chr19_GL383575v2_alt	120666	124452	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_19_GL383575v2_alt	HERV	HML6	oneside	chr19_GL383575v2_alt	147340	153411	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_19_GL383575v2_alt	HERV	ERVLE	internal	chr19_GL383575v2_alt	153428	155426	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HARLEQUIN_19_GL383576v1_alt	HERV	HARLEQUIN	prototype	chr19_GL383576v1_alt	27054	32285	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER41_19_GL383576v1_alt	HERV	MER41	internal	chr19_GL383576v1_alt	48557	51637	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_19_GL383576v1_alt	HERV	HERVL	oneside	chr19_GL383576v1_alt	61614	66932	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML2_19_GL383576v1_alt	HERV	HML2	oneside	chr19_GL383576v1_alt	69114	77314	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML6_19_GL383576v1_alt	HERV	HML6	oneside	chr19_GL383576v1_alt	112326	115633	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_19_GL383576v1_alt(a)	HERV	LTR25	oneside	chr19_GL383576v1_alt	145630	147213	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_19_GL383576v1_alt(b)	HERV	LTR25	internal	chr19_GL383576v1_alt	153374	154364	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
LTR25_19_GL383576v1_alt(c)	HERV	LTR25	internal	chr19_GL383576v1_alt	160510	165495	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_19_GL949746v1_alt(a)	HERV	ERVLB4	internal	chr19_GL949746v1_alt	276370	279583	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_19_GL949746v1_alt(b)	HERV	ERVLB4	oneside	chr19_GL949746v1_alt	474652	477441	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_19_GL949746v1_alt(a)	HERV	MER4B	oneside	chr19_GL949746v1_alt	522706	524205	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_19_GL949746v1_alt(b)	HERV	MER4B	internal	chr19_GL949746v1_alt	524517	527132	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_19_GL949746v1_alt(c)	HERV	ERVLB4	internal	chr19_GL949746v1_alt	560160	560963	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_19_GL949746v1_alt	HERV	HUERSP3	prototype	chr19_GL949746v1_alt	579046	584145	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_19_GL949746v1_alt(d)	HERV	ERVLB4	oneside	chr19_GL949746v1_alt	591302	593303	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19_GL949746v1_alt(a)	HERV	HERVH	oneside	chr19_GL949746v1_alt	800653	803987	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19_GL949746v1_alt(b)	HERV	HERVH	prototype	chr19_GL949746v1_alt	910227	915821	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_19_GL949747v2_alt	HERV	ERVLB4	internal	chr19_GL949747v2_alt	276251	279409	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19_GL949747v2_alt(a)	HERV	HERVH	prototype	chr19_GL949747v2_alt	539522	545771	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19_GL949747v2_alt(b)	HERV	HERVH	prototype	chr19_GL949747v2_alt	652031	657625	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19_GL949748v2_alt(a)	HERV	HERVH	oneside	chr19_GL949748v2_alt	877241	880575	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19_GL949748v2_alt(b)	HERV	HERVH	prototype	chr19_GL949748v2_alt	986815	992409	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19_GL949749v2_alt(a)	HERV	HERVH	oneside	chr19_GL949749v2_alt	904778	908112	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19_GL949749v2_alt(b)	HERV	HERVH	prototype	chr19_GL949749v2_alt	1014352	1019946	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19_GL949750v2_alt(a)	HERV	HERVH	oneside	chr19_GL949750v2_alt	879327	882661	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19_GL949750v2_alt(b)	HERV	HERVH	prototype	chr19_GL949750v2_alt	988901	994495	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19_GL949751v2_alt(a)	HERV	HERVH	oneside	chr19_GL949751v2_alt	815620	818954	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19_GL949751v2_alt(b)	HERV	HERVH	prototype	chr19_GL949751v2_alt	925194	930788	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_19_GL949752v1_alt(a)	HERV	ERVLB4	oneside	chr19_GL949752v1_alt	473146	475935	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_19_GL949752v1_alt(a)	HERV	MER4B	oneside	chr19_GL949752v1_alt	521193	522698	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_19_GL949752v1_alt(b)	HERV	MER4B	internal	chr19_GL949752v1_alt	523010	525626	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_19_GL949752v1_alt(b)	HERV	ERVLB4	internal	chr19_GL949752v1_alt	558655	559458	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_19_GL949752v1_alt	HERV	HUERSP3	prototype	chr19_GL949752v1_alt	577525	582585	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_19_GL949752v1_alt(c)	HERV	ERVLB4	oneside	chr19_GL949752v1_alt	589757	591757	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19_GL949752v1_alt(a)	HERV	HERVH	prototype	chr19_GL949752v1_alt	798661	804957	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19_GL949752v1_alt(b)	HERV	HERVH	prototype	chr19_GL949752v1_alt	909611	915205	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_19_GL949753v2_alt(a)	HERV	ERVLB4	internal	chr19_GL949753v2_alt	276626	279783	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_19_GL949753v2_alt(b)	HERV	ERVLB4	internal	chr19_GL949753v2_alt	380260	381063	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_19_GL949753v2_alt	HERV	HUERSP3	prototype	chr19_GL949753v2_alt	399147	404247	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_19_GL949753v2_alt(c)	HERV	ERVLB4	oneside	chr19_GL949753v2_alt	411497	413498	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19_GL949753v2_alt(a)	HERV	HERVH	oneside	chr19_GL949753v2_alt	609416	612750	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19_GL949753v2_alt(b)	HERV	HERVH	prototype	chr19_GL949753v2_alt	718990	724584	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP1_19_KI270867v1_alt	HERV	HUERSP1	internal	chr19_KI270867v1_alt	29523	31467	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_19_KI270867v1_alt	HERV	HERVL74	internal	chr19_KI270867v1_alt	70243	70971	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PABLA_19_KI270867v1_alt	HERV	PABLA	oneside	chr19_KI270867v1_alt	127028	130082	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_19_KI270867v1_alt	HERV	HUERSP2	prototype	chr19_KI270867v1_alt	141475	145634	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_19_KI270867v1_alt	HERV	ERV316A3	internal	chr19_KI270867v1_alt	194317	196123	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_19_KI270867v1_alt	HERV	MER4B	internal	chr19_KI270867v1_alt	232483	233762	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19_KI270917v1_alt	HERV	HERVH	prototype	chr19_KI270917v1_alt	173244	179544	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19_KI270920v1_alt	HERV	HERVH	prototype	chr19_KI270920v1_alt	180317	186617	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19_KI270921v1_alt	HERV	HERVH	prototype	chr19_KI270921v1_alt	264536	270836	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19_KI270922v1_alt	HERV	HERVH	prototype	chr19_KI270922v1_alt	170247	176547	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19_KI270923v1_alt	HERV	HERVH	prototype	chr19_KI270923v1_alt	171664	177964	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19_KI270929v1_alt	HERV	HERVH	prototype	chr19_KI270929v1_alt	168515	174815	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_19_KI270938v1_alt(a)	HERV	ERVLB4	internal	chr19_KI270938v1_alt	276599	279756	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_19_KI270938v1_alt(b)	HERV	ERVLB4	oneside	chr19_KI270938v1_alt	550843	553632	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_19_KI270938v1_alt(a)	HERV	MER4B	oneside	chr19_KI270938v1_alt	598888	600393	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_19_KI270938v1_alt(b)	HERV	MER4B	internal	chr19_KI270938v1_alt	600705	603313	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_19_KI270938v1_alt(c)	HERV	ERVLB4	internal	chr19_KI270938v1_alt	636339	637142	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_19_KI270938v1_alt	HERV	HUERSP3	prototype	chr19_KI270938v1_alt	655208	660305	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_19_KI270938v1_alt(d)	HERV	ERVLB4	oneside	chr19_KI270938v1_alt	667552	669554	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19_KI270938v1_alt(a)	HERV	HERVH	prototype	chr19_KI270938v1_alt	876775	883071	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVH_19_KI270938v1_alt(b)	HERV	HERVH	prototype	chr19_KI270938v1_alt	989311	994905	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_21_GL383579v2_alt(a)	HERV	HUERSP2	internal	chr21_GL383579v2_alt	17763	18280	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP2_21_GL383579v2_alt(b)	HERV	HUERSP2	oneside	chr21_GL383579v2_alt	18281	21531	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVL_21_GL383579v2_alt	HERV	ERVL	oneside	chr21_GL383579v2_alt	131444	134832	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV9_21_KI270874v1_alt	HERV	HERV9	prototype	chr21_KI270874v1_alt	153242	163161	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_22_GL383582v2_alt	HERV	HERVIP10F	prototype	chr22_GL383582v2_alt	26809	38263	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_22_GL383583v2_alt	HERV	MER101	internal	chr22_GL383583v2_alt	19251	20982	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_22_GL383583v2_alt	HERV	ERVLE	internal	chr22_GL383583v2_alt	30575	31899	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_22_KB663609v1_alt	HERV	HERVIP10F	prototype	chr22_KB663609v1_alt	26814	38263	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_22_KI270875v1_alt(a)	HERV	HERVL	oneside	chr22_KI270875v1_alt	11418	16535	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_22_KI270875v1_alt(b)	HERV	HERVL	prototype	chr22_KI270875v1_alt	72061	74251	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVI_22_KI270875v1_alt	HERV	HERVI	prototype	chr22_KI270875v1_alt	88355	95094	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HUERSP3_22_KI270875v1_alt	HERV	HUERSP3	prototype	chr22_KI270875v1_alt	95577	101181	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_22_KI270879v1_alt	HERV	ERVLE	internal	chr22_KI270879v1_alt	108237	109387	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_22_KI270879v1_alt	HERV	PRIMA41	internal	chr22_KI270879v1_alt	151521	156230	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVIP10F_22_KI270928v1_alt	HERV	HERVIP10F	prototype	chr22_KI270928v1_alt	26814	38263	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_X_KI270881v1_alt	HERV	HML3	prototype	chrX_KI270881v1_alt	48811	54449	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_1_KI270706v1_random	HERV	MER4	internal	chr1_KI270706v1_random	43776	44766	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_1_KI270708v1_random	HERV	HML1	oneside	chr1_KI270708v1_random	10042	12101	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_1_KI270708v1_random	HERV	HML3	oneside	chr1_KI270708v1_random	12102	15919	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLE_1_KI270711v1_random	HERV	ERVLE	internal	chr1_KI270711v1_random	40148	40754	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_1_KI270712v1_random	HERV	ERVLB4	oneside	chr1_KI270712v1_random	73046	74190	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_1_KI270713v1_random	HERV	PRIMA41	internal	chr1_KI270713v1_random	25544	27465	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_3_GL000221v1_random	HERV	HML3	oneside	chr3_GL000221v1_random	100685	104489	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_3_GL000221v1_random	HERV	HML1	oneside	chr3_GL000221v1_random	104490	106551	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_4_GL000008v2_random	HERV	HML1	oneside	chr4_GL000008v2_random	56768	58824	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_4_GL000008v2_random	HERV	HML3	oneside	chr4_GL000008v2_random	58825	62629	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_4_GL000008v2_random	HERV	MER4	internal	chr4_GL000008v2_random	129641	130629	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_9_KI270717v1_random	HERV	HERVL	prototype	chr9_KI270717v1_random	10444	14498	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_14_GL000009v2_random	HERV	MER4	internal	chr14_GL000009v2_random	82623	83608	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_14_GL000009v2_random	HERV	HML3	oneside	chr14_GL000009v2_random	145565	149374	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_14_GL000009v2_random	HERV	HML1	oneside	chr14_GL000009v2_random	149375	151433	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_14_GL000194v1_random	HERV	HML3	oneside	chr14_GL000194v1_random	135803	139617	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_14_GL000194v1_random	HERV	HML1	oneside	chr14_GL000194v1_random	139618	141676	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_14_KI270722v1_random	HERV	HML1	oneside	chr14_KI270722v1_random	41034	43093	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_14_KI270722v1_random	HERV	HML3	oneside	chr14_KI270722v1_random	43094	46900	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_14_KI270722v1_random(a)	HERV	MER101	internal	chr14_KI270722v1_random	159901	160979	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_14_KI270722v1_random(b)	HERV	MER101	oneside	chr14_KI270722v1_random	161224	163246	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_14_KI270722v1_random	HERV	HERV3	prototype	chr14_KI270722v1_random	175575	181663	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL_14_KI270725v1_random	HERV	HERVL	prototype	chr14_KI270725v1_random	81020	85032	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_14_KI270726v1_random	HERV	PRIMA41	internal	chr14_KI270726v1_random	10293	11383	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4B_14_KI270726v1_random	HERV	MER4B	internal	chr14_KI270726v1_random	30438	31196	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_15_KI270727v1_random	HERV	MER4	internal	chr15_KI270727v1_random	131169	132108	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_15_KI270727v1_random	HERV	ERV316A3	internal	chr15_KI270727v1_random	320496	321212	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL74_15_KI270727v1_random	HERV	HERVL74	oneside	chr15_KI270727v1_random	430087	433862	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL32_15_KI270727v1_random	HERV	HERVL32	internal	chr15_KI270727v1_random	447408	448247	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_16_KI270728v1_random(a)	HERV	ERV316A3	internal	chr16_KI270728v1_random	379102	380411	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_16_KI270728v1_random(b)	HERV	ERV316A3	oneside	chr16_KI270728v1_random	383268	384829	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_16_KI270728v1_random(c)	HERV	ERV316A3	internal	chr16_KI270728v1_random	652260	653569	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERV316A3_16_KI270728v1_random(d)	HERV	ERV316A3	oneside	chr16_KI270728v1_random	656426	657987	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_16_KI270728v1_random	HERV	MER4	oneside	chr16_KI270728v1_random	1245983	1250965	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_16_KI270728v1_random(a)	HERV	ERVLB4	internal	chr16_KI270728v1_random	1521483	1522026	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_16_KI270728v1_random(b)	HERV	ERVLB4	internal	chr16_KI270728v1_random	1737927	1739039	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL66_17_GL000205v2_random(a)	HERV	HERVL66	oneside	chr17_GL000205v2_random	40392	43993	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL66_17_GL000205v2_random(b)	HERV	HERVL66	oneside	chr17_GL000205v2_random	67547	69869	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL66_22_KI270733v1_random(a)	HERV	HERVL66	oneside	chr22_KI270733v1_random	1	2575	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_22_KI270733v1_random	HERV	HERVL40	internal	chr22_KI270733v1_random	52124	53880	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL66_22_KI270733v1_random(b)	HERV	HERVL66	oneside	chr22_KI270733v1_random	77984	79475	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_22_KI270733v1_random	HERV	ERVLB4	internal	chr22_KI270733v1_random	108006	108752	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL66_Un_GL000195v1	HERV	HERVL66	prototype	chrUn_GL000195v1	9900	13721	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_Un_GL000195v1	HERV	HERVL40	internal	chrUn_GL000195v1	39512	40187	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Un_GL000213v1	HERV	MER4	internal	chrUn_GL000213v1	102320	103267	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_Un_GL000214v1	HERV	HML1	oneside	chrUn_GL000214v1	3747	5805	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_Un_GL000214v1	HERV	HML3	oneside	chrUn_GL000214v1	5806	9679	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_Un_GL000218v1	HERV	HML3	oneside	chrUn_GL000218v1	118102	121917	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_Un_GL000218v1	HERV	HML1	oneside	chrUn_GL000218v1	121918	123976	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL40_Un_GL000220v1	HERV	HERVL40	internal	chrUn_GL000220v1	35209	36963	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERVL66_Un_GL000220v1	HERV	HERVL66	oneside	chrUn_GL000220v1	61160	62631	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
ERVLB4_Un_GL000220v1	HERV	ERVLB4	internal	chrUn_GL000220v1	91267	92019	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_Un_GL000224v1	HERV	MER101	oneside	chrUn_GL000224v1	79122	82501	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_Un_GL000224v1	HERV	HERV3	prototype	chrUn_GL000224v1	95884	101856	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
PRIMA41_Un_KI270442v1	HERV	PRIMA41	internal	chrUn_KI270442v1	284691	290804	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER101_Un_KI270741v1	HERV	MER101	oneside	chrUn_KI270741v1	20343	24396	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HERV3_Un_KI270741v1	HERV	HERV3	prototype	chrUn_KI270741v1	37767	43745	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_Un_KI270742v1	HERV	HML3	oneside	chrUn_KI270742v1	130641	134514	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_Un_KI270742v1	HERV	HML1	oneside	chrUn_KI270742v1	134515	136644	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_Un_KI270743v1	HERV	HML1	oneside	chrUn_KI270743v1	41605	43660	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_Un_KI270743v1	HERV	HML3	oneside	chrUn_KI270743v1	43661	47466	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
MER4_Un_KI270743v1	HERV	MER4	internal	chrUn_KI270743v1	114512	115500	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML3_Un_KI270751v1	HERV	HML3	oneside	chrUn_KI270751v1	94396	98269	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
HML1_Un_KI270751v1	HERV	HML1	oneside	chrUn_KI270751v1	98270	100328	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p36.33a	L1	L1	L1FLnI	chr1	437437	447857	+	noncoding	AL732372.2,WBP1LP7	transcribed_unprocessed_pseudogene,processed_pseudogene	ANTISENSE,SENSE	ENSG00000237094,ENSG00000269732	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p36.33b	L1	L1	L1FLnI	chr1	672413	682833	+	noncoding	AL669831.3,WBP1LP6	transcribed_processed_pseudogene,processed_pseudogene	ANTISENSE,SENSE	ENSG00000230021,ENSG00000268663	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p36.32a	L1	L1	L1FLnI	chr1	4030827	4040471	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL805961.1	ENSG00000284703	11319	EEF1DP6	ENSG00000229280	135057	None	None
L1FLnI_1p36.32b	L1	L1	L1FLnI	chr1	4031942	4040471	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL805961.1	ENSG00000284703	12434	EEF1DP6	ENSG00000229280	135057	None	None
L1FLnI_1p36.23	L1	L1	L1FLnI	chr1	7411259	7421422	-	coding	CAMTA1	protein_coding	ANTISENSE	ENSG00000171735	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p36.21a	L1	L1	L1FLnI	chr1	14354902	14365340	-	noncoding	KAZN,KAZN-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000189337,ENSG00000234593	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:14364722-14364851	chr1:14364721-14364723
L1FLnI_1p36.21b	L1	L1	L1FLnI	chr1	14354929	14365340	-	noncoding	KAZN,KAZN-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000189337,ENSG00000234593	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:14364722-14364851	chr1:14364721-14364723
L1FLnI_1p36.21c	L1	L1	L1FLnI	chr1	14381820	14391841	-	coding	KAZN,KAZN-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000189337,ENSG00000234593	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p36.11	L1	L1	L1FLnI	chr1	24268893	24278714	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRHL3-AS1	ENSG00000232298	28842	LINC02800	ENSG00000230023	57200	None	None
L1ORF2_1p36.11	L1	L1	L1ORF2	chr1	25505585	25513733	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MACO1	ENSG00000204178	5376	LDLRAP1	ENSG00000157978	29873	None	None
L1FLnI_1p35.2a	L1	L1	L1FLnI	chr1	30423646	30434046	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161638.1	ENSG00000231949	2538	MATN1	ENSG00000162510	277231	None	None
L1FLnI_1p35.2b	L1	L1	L1FLnI	chr1	30434993	30444625	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL161638.1	ENSG00000231949	13885	MATN1	ENSG00000162510	266652	None	None
L1FLnI_1p35.2c	L1	L1	L1FLnI	chr1	30453087	30463218	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MATN1	ENSG00000162510	248059	AL161638.1	ENSG00000231949	31979	None	None
L1FLnI_1p35.2d	L1	L1	L1FLnI	chr1	30489891	30500056	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161638.1	ENSG00000231949	68783	MATN1	ENSG00000162510	211221	None	None
L1FLnI_1p35.1a	L1	L1	L1FLnI	chr1	33668499	33678618	+	noncoding	CSMD2	protein_coding	ANTISENSE	ENSG00000121904	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p35.1b	L1	L1	L1FLnI	chr1	33826022	33836165	+	noncoding	CSMD2	protein_coding	ANTISENSE	ENSG00000121904	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p35.1c	L1	L1	L1FLnI	chr1	34088896	34098926	+	coding	CSMD2	protein_coding	ANTISENSE	ENSG00000121904	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p35.1d	L1	L1	L1FLnI	chr1	34088896	34098913	+	coding	CSMD2	protein_coding	ANTISENSE	ENSG00000121904	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p35.1e	L1	L1	L1FLnI	chr1	34247243	34257267	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	C1orf94	ENSG00000142698	28112	AC115286.1	ENSG00000270241	19592	None	None
L1FLnI_1p34.3a	L1	L1	L1FLnI	chr1	34302218	34312541	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC115286.1	ENSG00000270241	24926	AC099565.1	ENSG00000287703	327616	None	None
L1FLnI_1p34.3b	L1	L1	L1FLnI	chr1	34565576	34575605	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC099565.1	ENSG00000287703	64552	AC115286.1	ENSG00000270241	288284	None	None
L1FLnI_1p34.3c	L1	L1	L1FLnI	chr1	37204531	37213889	+	coding	AL353604.1	lncRNA	ANTISENSE	ENSG00000223944	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p34.3d	L1	L1	L1FLnI	chr1	37374525	37384703	-	noncoding	LINC01137	lncRNA	SENSE	ENSG00000233621	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p34.3e	L1	L1	L1FLnI	chr1	38399317	38409852	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-753P	ENSG00000200796	2552	LINC01685	ENSG00000238063	64973	None	None
L1FLnI_1p34.3f	L1	L1	L1FLnI	chr1	38628658	38638845	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL354702.1	ENSG00000215895	70086	LINC01685	ENSG00000238063	112138	None	None
L1FLnI_1p34.2a	L1	L1	L1FLnI	chr1	40362115	40371369	+	coding	SMAP2,AL031985.1	protein_coding,processed_pseudogene	SENSE,SENSE	ENSG00000084070,ENSG00000213172	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p34.2b	L1	L1	L1FLnI	chr1	41172766	41182862	+	coding	SCMH1	protein_coding	ANTISENSE	ENSG00000010803	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:41176165-41176169
L1FLnI_1p34.2c	L1	L1	L1FLnI	chr1	42055777	42065872	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158216.1	ENSG00000287587	3993	AC114492.1	ENSG00000228776	74763	None	None
L1FLnI_1p34.2d	L1	L1	L1FLnI	chr1	42893961	42904294	-	coding	ATP6V1E1P1	processed_pseudogene	ANTISENSE	ENSG00000225099	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p34.2e	L1	L1	L1FLnI	chr1	43114029	43124016	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	FAM183A	ENSG00000186973	21137	AL161637.1	ENSG00000277513	9532	None	None
L1FLnI_1p34.1a	L1	L1	L1FLnI	chr1	45158856	45168982	+	noncoding	ZSWIM5	protein_coding	ANTISENSE	ENSG00000162415	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p34.1b	L1	L1	L1FLnI	chr1	45281067	45291211	+	coding	ZSWIM5	protein_coding	ANTISENSE	ENSG00000162415	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:45281260-45281351	None
L1FLnI_1p33a	L1	L1	L1FLnI	chr1	46824640	46834812	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CYP4Z2P	ENSG00000154198	8283	CYP4B1	ENSG00000142973	5227	None	None
L1FLnI_1p33b	L1	L1	L1FLnI	chr1	46842639	46851391	+	coding	CYP4Z2P	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000154198	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33c	L1	L1	L1FLnI	chr1	46919194	46929353	-	noncoding	CYP4A11	protein_coding	SENSE	ENSG00000187048	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33d	L1	L1	L1FLnI	chr1	46972475	46982643	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CYP4A26P	ENSG00000259832	4601	CYP4A43P	ENSG00000261196	11739	None	None
L1FLnI_1p33e	L1	L1	L1FLnI	chr1	46981854	46991553	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CYP4A26P	ENSG00000259832	13980	CYP4A43P	ENSG00000261196	2829	None	None
L1FLnI_1p33f	L1	L1	L1FLnI	chr1	47002948	47013068	+	coding	CYP4A44P	unprocessed_pseudogene	ANTISENSE	ENSG00000261290	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:47004182-47004191
L1FLnI_1p33g	L1	L1	L1FLnI	chr1	47162426	47172561	+	coding	CYP4A22-AS1,MTND1P34	lncRNA,transcribed_processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000225506,ENSG00000225514	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33h	L1	L1	L1FLnI	chr1	47952742	47962875	+	coding	TRABD2B	protein_coding	ANTISENSE	ENSG00000269113	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33i	L1	L1	L1FLnI	chr1	48140418	48149370	+	noncoding	SKINT1L	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000242267	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33j	L1	L1	L1FLnI	chr1	48146627	48156657	+	coding	SKINT1L	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000242267	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33k	L1	L1	L1FLnI	chr1	48167454	48177168	-	noncoding	SKINT1L,AL109659.1	transcribed_unprocessed_pseudogene,lncRNA	SENSE,ANTISENSE	ENSG00000242267,ENSG00000223720	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33l	L1	L1	L1FLnI	chr1	48273696	48283843	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL109659.3	ENSG00000279214	10517	SPATA6	ENSG00000132122	11530	None	None
L1FLnI_1p33m	L1	L1	L1FLnI	chr1	48308090	48318189	+	coding	SPATA6	protein_coding	ANTISENSE	ENSG00000132122	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33n	L1	L1	L1FLnI	chr1	48363305	48373429	-	coding	SPATA6	protein_coding	SENSE	ENSG00000132122	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33o	L1	L1	L1FLnI	chr1	49002514	49012544	+	coding	AGBL4	protein_coding	ANTISENSE	ENSG00000186094	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33p	L1	L1	L1FLnI	chr1	49067738	49078023	-	noncoding	AGBL4,AC099788.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000186094,ENSG00000229846	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33q	L1	L1	L1FLnI	chr1	49082004	49092697	+	noncoding	AGBL4,AC099788.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000186094,ENSG00000229846	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33r	L1	L1	L1FLnI	chr1	49115727	49125848	-	coding	AGBL4,AC099788.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000186094,ENSG00000229846	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33s	L1	L1	L1FLnI	chr1	49254310	49263810	+	coding	AGBL4,AGBL4-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000186094,ENSG00000230114	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33t	L1	L1	L1FLnI	chr1	49279009	49288876	+	coding	AGBL4	protein_coding	ANTISENSE	ENSG00000186094	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33u	L1	L1	L1FLnI	chr1	49456083	49464992	-	coding	AGBL4,AGBL4-IT1	protein_coding,lncRNA	SENSE,SENSE	ENSG00000186094,ENSG00000225623	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33v	L1	L1	L1FLnI	chr1	49547573	49556331	-	coding	AGBL4	protein_coding	SENSE	ENSG00000186094	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33w	L1	L1	L1FLnI	chr1	49560815	49570947	-	coding	AGBL4	protein_coding	SENSE	ENSG00000186094	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33x	L1	L1	L1FLnI	chr1	49638692	49647696	+	noncoding	AGBL4	protein_coding	ANTISENSE	ENSG00000186094	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33y	L1	L1	L1FLnI	chr1	49704017	49712959	-	coding	AGBL4	protein_coding	SENSE	ENSG00000186094	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33z	L1	L1	L1FLnI	chr1	49734348	49744564	+	coding	AGBL4	protein_coding	ANTISENSE	ENSG00000186094	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_1p33	L1	L1	L1ORF2	chr1	49874143	49882188	-	coding	AGBL4	protein_coding	SENSE	ENSG00000186094	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33aa	L1	L1	L1FLnI	chr1	49911610	49921756	+	noncoding	AGBL4	protein_coding	ANTISENSE	ENSG00000186094	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33ba	L1	L1	L1FLnI	chr1	49931343	49941364	+	coding	AGBL4	protein_coding	ANTISENSE	ENSG00000186094	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33ca	L1	L1	L1FLnI	chr1	49939765	49948452	+	noncoding	AGBL4	protein_coding	ANTISENSE	ENSG00000186094	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33da	L1	L1	L1FLnI	chr1	49939765	49948451	+	noncoding	AGBL4	protein_coding	ANTISENSE	ENSG00000186094	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p33ea	L1	L1	L1FLnI	chr1	49991132	50001511	+	noncoding	AGBL4,AL645730.1	protein_coding,TEC	ANTISENSE,SENSE	ENSG00000186094,ENSG00000279324	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr1:49999332-49999411	None
L1FLnI_1p32.3a	L1	L1	L1FLnI	chr1	50357156	50366078	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL596275.1	ENSG00000234080	30149	HMGB1P45	ENSG00000229316	32747	None	None
L1FLnI_1p32.3b	L1	L1	L1FLnI	chr1	50357156	50366107	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL596275.1	ENSG00000234080	30149	HMGB1P45	ENSG00000229316	32718	None	None
L1FLnI_1p32.3c	L1	L1	L1FLnI	chr1	50885884	50895993	-	coding	FAF1	protein_coding	SENSE	ENSG00000185104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p32.3d	L1	L1	L1FLnI	chr1	50904388	50914509	-	coding	FAF1	protein_coding	SENSE	ENSG00000185104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p32.3e	L1	L1	L1FLnI	chr1	51383142	51391982	+	coding	EPS15	protein_coding	ANTISENSE	ENSG00000085832	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p32.3f	L1	L1	L1FLnI	chr1	51383142	51391997	+	coding	EPS15	protein_coding	ANTISENSE	ENSG00000085832	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p32.3g	L1	L1	L1FLnI	chr1	52170502	52180641	-	coding	ZFYVE9,PDCL3P6	protein_coding,processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000157077,ENSG00000224255	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p32.3h	L1	L1	L1FLnI	chr1	53001164	53011282	+	coding	SCP2	protein_coding	SENSE	ENSG00000116171	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p32.3i	L1	L1	L1FLnI	chr1	54443865	54452912	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC099796.2	ENSG00000287582	61505	AL035415.1	ENSG00000232245	23005	None	None
L1FLnI_1p32.3j	L1	L1	L1FLnI	chr1	55426758	55437324	+	coding	AL603840.1	lncRNA	SENSE	ENSG00000234810	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:55429106-55429360	None
L1FLnI_1p32.3k	L1	L1	L1FLnI	chr1	55561332	55571469	-	coding	AL603840.1	lncRNA	ANTISENSE	ENSG00000234810	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p32.2a	L1	L1	L1FLnI	chr1	56339717	56348769	+	noncoding	AC119674.1,AC119674.2	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000260971,ENSG00000284686	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p32.2b	L1	L1	L1FLnI	chr1	57559815	57569476	+	coding	DAB1	protein_coding	ANTISENSE	ENSG00000173406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p32.2c	L1	L1	L1FLnI	chr1	58125957	58135985	-	coding	DAB1	protein_coding	SENSE	ENSG00000173406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p32.2d	L1	L1	L1FLnI	chr1	58268515	58278532	-	coding	DAB1	protein_coding	SENSE	ENSG00000173406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p32.2e	L1	L1	L1FLnI	chr1	58372673	58382706	-	coding	DAB1	protein_coding	SENSE	ENSG00000173406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p32.1a	L1	L1	L1FLnI	chr1	58954630	58964783	+	coding	LINC01358	lncRNA	SENSE	ENSG00000237352	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p32.1b	L1	L1	L1FLnI	chr1	59247325	59257462	+	noncoding	AC093425.1	lncRNA	ANTISENSE	ENSG00000224609	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p32.1c	L1	L1	L1FLnI	chr1	59365425	59375578	+	noncoding	FGGY	protein_coding	SENSE	ENSG00000172456	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p32.1d	L1	L1	L1FLnI	chr1	59529497	59539505	+	coding	FGGY	protein_coding	SENSE	ENSG00000172456	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p32.1e	L1	L1	L1FLnI	chr1	59583305	59593448	+	coding	FGGY	protein_coding	SENSE	ENSG00000172456	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p32.1f	L1	L1	L1FLnI	chr1	59607038	59617142	+	coding	FGGY	protein_coding	SENSE	ENSG00000172456	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p32.1g	L1	L1	L1FLnI	chr1	59647249	59657279	-	coding	FGGY	protein_coding	ANTISENSE	ENSG00000172456	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p32.1h	L1	L1	L1FLnI	chr1	59787437	59797257	+	noncoding	FGGY,AL035416.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000172456,ENSG00000226883	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p32.1i	L1	L1	L1FLnI	chr1	59787437	59796732	+	noncoding	FGGY,AL035416.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000172456,ENSG00000226883	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p32.1j	L1	L1	L1FLnI	chr1	60486634	60496649	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02778	ENSG00000238242	336850	LINC01748	ENSG00000226476	19067	None	None
L1FLnI_1p32.1k	L1	L1	L1FLnI	chr1	60636514	60646537	+	coding	LINC01748	lncRNA	ANTISENSE	ENSG00000226476	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p32.1l	L1	L1	L1FLnI	chr1	60705574	60714250	+	noncoding	AC099792.1	lncRNA	ANTISENSE	ENSG00000231252	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p32.1m	L1	L1	L1FLnI	chr1	60772042	60782175	-	coding	AC099792.1	lncRNA	SENSE	ENSG00000231252	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.3a	L1	L1	L1FLnI	chr1	61541282	61551392	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099791.4	ENSG00000287224	36657	AC099791.3	ENSG00000284808	8011	None	None
L1FLnI_1p31.3b	L1	L1	L1FLnI	chr1	61572883	61582309	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC099791.4	ENSG00000287224	5740	AC099791.3	ENSG00000284808	39612	None	None
L1FLnI_1p31.3c	L1	L1	L1FLnI	chr1	61939642	61949724	+	coding	PATJ	protein_coding	SENSE	ENSG00000132849	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.3d	L1	L1	L1FLnI	chr1	62698907	62708898	-	coding	AC103923.1	lncRNA	ANTISENSE	ENSG00000235545	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.3e	L1	L1	L1FLnI	chr1	64247973	64258294	+	noncoding	UBE2U	protein_coding	SENSE	ENSG00000177414	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.3f	L1	L1	L1FLnI	chr1	64269928	64280086	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2U	ENSG00000177414	2560	RNU7-62P	ENSG00000238653	104312	None	None
L1FLnI_1p31.3g	L1	L1	L1FLnI	chr1	65449781	65459809	-	coding	LEPR	protein_coding	ANTISENSE	ENSG00000116678	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.3h	L1	L1	L1FLnI	chr1	65461504	65471672	-	noncoding	LEPR	protein_coding	ANTISENSE	ENSG00000116678	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:65471155-65471160
L1FLnI_1p31.3i	L1	L1	L1FLnI	chr1	65544289	65554470	-	coding	LEPR	protein_coding	ANTISENSE	ENSG00000116678	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.3j	L1	L1	L1FLnI	chr1	65544308	65554470	-	coding	LEPR	protein_coding	ANTISENSE	ENSG00000116678	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.3k	L1	L1	L1FLnI	chr1	65558051	65568076	-	coding	LEPR	protein_coding	ANTISENSE	ENSG00000116678	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:65566220-65566224
L1FLnI_1p31.3l	L1	L1	L1FLnI	chr1	65648184	65658583	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LEPR	ENSG00000116678	6625	AL513493.1	ENSG00000285079	45379	None	None
L1FLnI_1p31.3m	L1	L1	L1FLnI	chr1	66184345	66194486	-	noncoding	PDE4B	protein_coding	ANTISENSE	ENSG00000184588	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.3n	L1	L1	L1FLnI	chr1	66199309	66208496	-	noncoding	PDE4B	protein_coding	ANTISENSE	ENSG00000184588	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.3o	L1	L1	L1FLnI	chr1	66427452	66436284	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SGIP1	ENSG00000118473	97099	PDE4B	ENSG00000184588	52873	None	None
L1FLnI_1p31.3p	L1	L1	L1FLnI	chr1	66477425	66487452	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PDE4B	ENSG00000184588	102846	SGIP1	ENSG00000118473	45931	None	chr1:66478215-66478217,chr1:66480326-66480332
L1FLnI_1p31.3q	L1	L1	L1FLnI	chr1	66776644	66786826	+	coding	TCTEX1D1	protein_coding	SENSE	ENSG00000152760	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.3r	L1	L1	L1FLnI	chr1	67032187	67040761	-	noncoding	SLC35D1	protein_coding	SENSE	ENSG00000116704	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.3s	L1	L1	L1FLnI	chr1	67078362	67088415	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	C1orf141	ENSG00000203963	3750	SLC35D1	ENSG00000116704	24214	None	None
L1FLnI_1p31.3t	L1	L1	L1FLnI	chr1	67078384	67088415	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	C1orf141	ENSG00000203963	3750	SLC35D1	ENSG00000116704	24236	None	None
L1FLnI_1p31.3u	L1	L1	L1FLnI	chr1	67176140	67186276	-	coding	C1orf141,IL23R	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000203963,ENSG00000162594	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.3v	L1	L1	L1FLnI	chr1	67900600	67909353	-	noncoding	GNG12-AS1	lncRNA	ANTISENSE	ENSG00000232284	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.3w	L1	L1	L1FLnI	chr1	68002628	68012723	-	noncoding	GNG12-AS1	lncRNA	ANTISENSE	ENSG00000232284	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.3x	L1	L1	L1FLnI	chr1	68055433	68064879	+	noncoding	GNG12-AS1	lncRNA	SENSE	ENSG00000232284	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.3y	L1	L1	L1FLnI	chr1	68087097	68097205	-	noncoding	GNG12-AS1	lncRNA	ANTISENSE	ENSG00000232284	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.3z	L1	L1	L1FLnI	chr1	68495859	68505163	+	coding	DEPDC1,DEPDC1-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000024526,ENSG00000234264	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:68497036-68497053,chr1:68497061-68497089,chr1:68497099-68497118,chr1:68497122-68497127
L1FLnI_1p31.2a	L1	L1	L1FLnI	chr1	68544007	68553835	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DEPDC1-AS1	ENSG00000234264	5380	AL035412.1	ENSG00000285041	79866	None	None
L1FLnI_1p31.2b	L1	L1	L1FLnI	chr1	68680988	68691136	-	coding	AL033530.1	lncRNA	ANTISENSE	ENSG00000285407	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.2c	L1	L1	L1FLnI	chr1	68681000	68691136	-	coding	AL033530.1	lncRNA	ANTISENSE	ENSG00000285407	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.2d	L1	L1	L1FLnI	chr1	68875279	68885305	-	coding	AL033530.1	lncRNA	ANTISENSE	ENSG00000285407	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.2e	L1	L1	L1FLnI	chr1	69066999	69075921	-	noncoding	LINC01707	lncRNA	ANTISENSE	ENSG00000223883	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.2f	L1	L1	L1FLnI	chr1	69096030	69106168	-	coding	LINC01707	lncRNA	ANTISENSE	ENSG00000223883	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:69103240-69103243
L1FLnI_1p31.2g	L1	L1	L1FLnI	chr1	69151303	69161850	-	noncoding	LINC01707	lncRNA	ANTISENSE	ENSG00000223883	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1a	L1	L1	L1FLnI	chr1	69306299	69316127	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01758	ENSG00000229639	117128	LINC02791	ENSG00000235446	56822	None	None
L1FLnI_1p31.1b	L1	L1	L1FLnI	chr1	69367471	69378205	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01758	ENSG00000229639	55050	LINC02791	ENSG00000235446	117994	None	None
L1FLnI_1p31.1c	L1	L1	L1FLnI	chr1	69388951	69399094	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01758	ENSG00000229639	34161	LINC02791	ENSG00000235446	139474	None	None
L1FLnI_1p31.1d	L1	L1	L1FLnI	chr1	69882115	69892143	-	coding	LRRC7	protein_coding	ANTISENSE	ENSG00000033122	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1e	L1	L1	L1FLnI	chr1	69904766	69914848	-	coding	LRRC7	protein_coding	ANTISENSE	ENSG00000033122	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1f	L1	L1	L1FLnI	chr1	69904776	69914848	-	coding	LRRC7	protein_coding	ANTISENSE	ENSG00000033122	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1g	L1	L1	L1FLnI	chr1	69922315	69932452	-	coding	LRRC7	protein_coding	ANTISENSE	ENSG00000033122	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1h	L1	L1	L1FLnI	chr1	70594622	70604778	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CASP3P1	ENSG00000237033	55879	AL354872.1	ENSG00000233020	63130	None	None
L1FLnI_1p31.1i	L1	L1	L1FLnI	chr1	70594635	70604778	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CASP3P1	ENSG00000237033	55879	AL354872.1	ENSG00000233020	63143	None	None
L1FLnI_1p31.1j	L1	L1	L1FLnI	chr1	70722251	70732136	-	noncoding	LINC01788	lncRNA	ANTISENSE	ENSG00000229051	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1k	L1	L1	L1FLnI	chr1	70739518	70749376	-	noncoding	LINC01788	lncRNA	ANTISENSE	ENSG00000229051	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:70745516-70745901	None
L1FLnI_1p31.1l	L1	L1	L1FLnI	chr1	71212421	71221826	+	coding	ZRANB2-AS2	lncRNA	SENSE	ENSG00000229956	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_1p31.1a	L1	L1	L1FLI	chr1	71512710	71520756	+	coding	NEGR1	protein_coding	ANTISENSE	ENSG00000172260	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_1p31.1b	L1	L1	L1FLI	chr1	71887203	71895252	+	coding	NEGR1	protein_coding	ANTISENSE	ENSG00000172260	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1m	L1	L1	L1FLnI	chr1	72447193	72457381	+	noncoding	AL513166.1	lncRNA	SENSE	ENSG00000286863	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1n	L1	L1	L1FLnI	chr1	72712262	72721163	-	noncoding	AL513166.1,AL583808.1,RNU6-1246P	lncRNA,lncRNA,snRNA	ANTISENSE,SENSE,SENSE	ENSG00000286863,ENSG00000225087,ENSG00000212366	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:72712610-72712615
L1FLnI_1p31.1o	L1	L1	L1FLnI	chr1	72712282	72721163	-	noncoding	AL513166.1,AL583808.1,RNU6-1246P	lncRNA,lncRNA,snRNA	ANTISENSE,SENSE,SENSE	ENSG00000286863,ENSG00000225087,ENSG00000212366	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:72712610-72712615
L1FLnI_1p31.1p	L1	L1	L1FLnI	chr1	72826948	72837116	+	noncoding	AL583808.1,LINC02797	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000225087,ENSG00000285808	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1q	L1	L1	L1FLnI	chr1	72826948	72836925	+	noncoding	AL583808.1,LINC02797	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000225087,ENSG00000285808	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1r	L1	L1	L1FLnI	chr1	73040300	73051891	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL732618.1	ENSG00000280317	60986	KRT8P21	ENSG00000229636	52901	None	None
L1FLnI_1p31.1s	L1	L1	L1FLnI	chr1	73237721	73246696	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP19	ENSG00000251825	45866	LINC01360	ENSG00000233973	58913	None	None
L1FLnI_1p31.1t	L1	L1	L1FLnI	chr1	73321374	73330733	-	noncoding	LINC01360	lncRNA	ANTISENSE	ENSG00000233973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1u	L1	L1	L1FLnI	chr1	73485803	73495792	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02238	ENSG00000223479	139424	LINC01360	ENSG00000233973	130550	None	None
L1FLnI_1p31.1v	L1	L1	L1FLnI	chr1	73574072	73582860	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01360	ENSG00000233973	218819	LINC02238	ENSG00000223479	52356	None	None
L1FLnI_1p31.1w	L1	L1	L1FLnI	chr1	73626661	73635503	+	noncoding	LINC02238	lncRNA	SENSE	ENSG00000223479	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1x	L1	L1	L1FLnI	chr1	74093622	74102571	+	coding	LRRIQ3	protein_coding	ANTISENSE	ENSG00000162620	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1y	L1	L1	L1FLnI	chr1	74122657	74134212	-	noncoding	LRRIQ3	protein_coding	SENSE	ENSG00000162620	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1z	L1	L1	L1FLnI	chr1	74219624	74230476	+	noncoding	FPGT,FPGT-TNNI3K	protein_coding,protein_coding	SENSE,SENSE	ENSG00000254685,ENSG00000259030	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1aa	L1	L1	L1FLnI	chr1	74346509	74356601	-	coding	FPGT-TNNI3K,TNNI3K,AC093158.1	protein_coding,protein_coding,lncRNA	ANTISENSE,ANTISENSE,SENSE	ENSG00000259030,ENSG00000116783,ENSG00000237324	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1ba	L1	L1	L1FLnI	chr1	74550519	74559075	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TNNI3K	ENSG00000116783	6091	ERICH3	ENSG00000178965	9042	None	None
L1FLnI_1p31.1ca	L1	L1	L1FLnI	chr1	74873622	74883655	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TYW3	ENSG00000162623	106944	AC133865.1	ENSG00000229943	79659	None	None
L1FLnI_1p31.1da	L1	L1	L1FLnI	chr1	74873622	74883642	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TYW3	ENSG00000162623	106944	AC133865.1	ENSG00000229943	79672	None	None
L1FLnI_1p31.1ea	L1	L1	L1FLnI	chr1	74915193	74924524	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC133865.1	ENSG00000229943	38790	TYW3	ENSG00000162623	148515	None	None
L1FLnI_1p31.1fa	L1	L1	L1FLnI	chr1	74920052	74930603	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TYW3	ENSG00000162623	153374	AC133865.1	ENSG00000229943	32711	None	None
L1FLnI_1p31.1ga	L1	L1	L1FLnI	chr1	74983377	74993124	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC133865.1	ENSG00000229943	18259	AC099786.3	ENSG00000261213	129394	None	None
L1FLnI_1p31.1ha	L1	L1	L1FLnI	chr1	75106367	75116387	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC099786.3	ENSG00000261213	6131	AC133865.1	ENSG00000229943	141249	None	None
L1FLnI_1p31.1ia	L1	L1	L1FLnI	chr1	75175175	75185332	-	coding	RNU6-622P	snRNA	ANTISENSE	ENSG00000206999	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1ja	L1	L1	L1FLnI	chr1	75254250	75264644	+	noncoding	SLC44A5	protein_coding	ANTISENSE	ENSG00000137968	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1ka	L1	L1	L1FLnI	chr1	75282429	75291414	-	noncoding	SLC44A5	protein_coding	SENSE	ENSG00000137968	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_1p31.1	L1	L1	L1ORF2	chr1	75381189	75389238	+	coding	SLC44A5	protein_coding	ANTISENSE	ENSG00000137968	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1la	L1	L1	L1FLnI	chr1	75398888	75409362	+	noncoding	SLC44A5	protein_coding	ANTISENSE	ENSG00000137968	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1ma	L1	L1	L1FLnI	chr1	75446512	75457015	+	noncoding	SLC44A5	protein_coding	ANTISENSE	ENSG00000137968	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1na	L1	L1	L1FLnI	chr1	75472763	75482930	+	coding	SLC44A5	protein_coding	ANTISENSE	ENSG00000137968	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1oa	L1	L1	L1FLnI	chr1	75674252	75684270	+	coding	AL137803.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000230863	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1pa	L1	L1	L1FLnI	chr1	75674252	75684285	+	coding	AL137803.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000230863	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1qa	L1	L1	L1FLnI	chr1	75694141	75704174	+	coding	AL137803.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000230863	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1ra	L1	L1	L1FLnI	chr1	75774093	75784242	+	coding	ACADM	protein_coding	SENSE	ENSG00000117054	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1sa	L1	L1	L1FLnI	chr1	75825333	75835434	+	noncoding	MSH4	protein_coding	SENSE	ENSG00000057468	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1ta	L1	L1	L1FLnI	chr1	75855791	75865918	-	noncoding	MSH4	protein_coding	ANTISENSE	ENSG00000057468	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1ua	L1	L1	L1FLnI	chr1	76164561	76173729	-	noncoding	ST6GALNAC3	protein_coding	ANTISENSE	ENSG00000184005	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1va	L1	L1	L1FLnI	chr1	76164561	76173968	-	noncoding	ST6GALNAC3	protein_coding	ANTISENSE	ENSG00000184005	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1wa	L1	L1	L1FLnI	chr1	76482227	76491538	-	coding	ST6GALNAC3	protein_coding	ANTISENSE	ENSG00000184005	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1xa	L1	L1	L1FLnI	chr1	76977523	76987025	+	noncoding	ST6GALNAC5	protein_coding	SENSE	ENSG00000117069	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1ya	L1	L1	L1FLnI	chr1	76998988	77009015	-	coding	ST6GALNAC5	protein_coding	ANTISENSE	ENSG00000117069	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1za	L1	L1	L1FLnI	chr1	77244559	77253703	+	noncoding	AC093433.2	lncRNA	SENSE	ENSG00000287870	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1ab	L1	L1	L1FLnI	chr1	77604438	77613560	+	noncoding	AC118549.1	protein_coding	ANTISENSE	ENSG00000036549	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:77605127-77605142,chr1:77605223-77605236,chr1:77605279-77605307,chr1:77605339-77605356,chr1:77605365-77605421
L1FLnI_1p31.1bb	L1	L1	L1FLnI	chr1	78199610	78210071	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNFT1P2	ENSG00000233333	28373	AC096531.2	ENSG00000237413	19528	None	None
L1FLnI_1p31.1cb	L1	L1	L1FLnI	chr1	78253478	78263147	+	noncoding	AC096531.2	lncRNA	SENSE	ENSG00000237413	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1db	L1	L1	L1FLnI	chr1	78254016	78263140	+	noncoding	AC096531.2	lncRNA	SENSE	ENSG00000237413	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1eb	L1	L1	L1FLnI	chr1	78306561	78316657	+	coding	AC096531.2,PTGFR	lncRNA,protein_coding	SENSE,SENSE	ENSG00000237413,ENSG00000122420	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1fb	L1	L1	L1FLnI	chr1	78393582	78403070	-	noncoding	PTGFR	protein_coding	ANTISENSE	ENSG00000122420	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1gb	L1	L1	L1FLnI	chr1	78458981	78470005	-	coding	PTGFR	protein_coding	ANTISENSE	ENSG00000122420	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1hb	L1	L1	L1FLnI	chr1	78480074	78489562	+	noncoding	PTGFR	protein_coding	SENSE	ENSG00000122420	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1ib	L1	L1	L1FLnI	chr1	78550533	78559969	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTGFR	ENSG00000122420	9832	IFI44L	ENSG00000137959	59953	None	None
L1FLnI_1p31.1jb	L1	L1	L1FLnI	chr1	78604201	78614230	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PTGFR	ENSG00000122420	63500	IFI44L	ENSG00000137959	5692	None	None
L1FLnI_1p31.1kb	L1	L1	L1FLnI	chr1	78844946	78854974	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ADGRL4	ENSG00000162618	34790	AC104837.1	ENSG00000235400	94287	None	None
L1FLnI_1p31.1lb	L1	L1	L1FLnI	chr1	78927534	78936040	+	noncoding	ADGRL4	protein_coding	ANTISENSE	ENSG00000162618	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:78930872-78930873
L1FLnI_1p31.1mb	L1	L1	L1FLnI	chr1	79410690	79420801	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02792	ENSG00000285462	64245	ADH5P2	ENSG00000232676	100279	None	None
L1FLnI_1p31.1nb	L1	L1	L1FLnI	chr1	79510763	79520780	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ADH5P2	ENSG00000232676	300	LINC02792	ENSG00000285462	164318	None	None
L1FLnI_1p31.1ob	L1	L1	L1FLnI	chr1	79510776	79520780	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ADH5P2	ENSG00000232676	300	LINC02792	ENSG00000285462	164331	None	None
L1FLnI_1p31.1pb	L1	L1	L1FLnI	chr1	79871508	79882152	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADH5P2	ENSG00000232676	349305	AC099671.1	ENSG00000285409	85581	None	chr1:79873652-79873654
L1FLnI_1p31.1qb	L1	L1	L1FLnI	chr1	79888113	79898231	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC099671.1	ENSG00000285409	69502	ADH5P2	ENSG00000232676	365910	None	None
L1FLnI_1p31.1rb	L1	L1	L1FLnI	chr1	79937888	79947919	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC099671.1	ENSG00000285409	19814	ADH5P2	ENSG00000232676	415685	None	None
L1FLnI_1p31.1sb	L1	L1	L1FLnI	chr1	79937911	79947919	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC099671.1	ENSG00000285409	19814	ADH5P2	ENSG00000232676	415708	None	None
L1FLnI_1p31.1tb	L1	L1	L1FLnI	chr1	80132050	80142077	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB1P18	ENSG00000236407	141275	AC098657.3	ENSG00000277670	7689	None	None
L1FLnI_1p31.1ub	L1	L1	L1FLnI	chr1	80147910	80157931	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB1P18	ENSG00000236407	125421	AC098657.3	ENSG00000277670	23549	None	None
L1FLnI_1p31.1vb	L1	L1	L1FLnI	chr1	80148899	80157931	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB1P18	ENSG00000236407	125421	AC098657.3	ENSG00000277670	24538	None	None
L1FLnI_1p31.1wb	L1	L1	L1FLnI	chr1	80393850	80403994	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA1P64	ENSG00000213559	47089	AL606519.1	ENSG00000225598	19229	None	None
L1FLnI_1p31.1xb	L1	L1	L1FLnI	chr1	80428481	80438587	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA1P64	ENSG00000213559	12496	AL606519.1	ENSG00000225598	53860	None	None
L1FLnI_1p31.1yb	L1	L1	L1FLnI	chr1	80774299	80784068	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01781	ENSG00000234184	127508	MTND2P30	ENSG00000227937	296722	chr1:80775283-80775438	None
L1FLnI_1p31.1zb	L1	L1	L1FLnI	chr1	80780067	80790163	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01781	ENSG00000234184	133276	MTND2P30	ENSG00000227937	290627	None	None
L1FLI_1p31.1c	L1	L1	L1FLI	chr1	80938221	80946267	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTND2P30	ENSG00000227937	134523	LINC01781	ENSG00000234184	291430	None	None
L1FLnI_1p31.1ac	L1	L1	L1FLnI	chr1	81683616	81692597	-	noncoding	ADGRL2	protein_coding	ANTISENSE	ENSG00000117114	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:81690973-81691305	None
L1FLnI_1p31.1bc	L1	L1	L1FLnI	chr1	82130415	82140390	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL157944.1	ENSG00000233290	72023	ADGRL2	ENSG00000117114	137979	None	None
L1FLnI_1p31.1cc	L1	L1	L1FLnI	chr1	82130431	82140390	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL157944.1	ENSG00000233290	72023	ADGRL2	ENSG00000117114	137995	None	None
L1FLnI_1p31.1dc	L1	L1	L1FLnI	chr1	82234713	82244109	-	noncoding	AL157944.1	lncRNA	SENSE	ENSG00000233290	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1ec	L1	L1	L1FLnI	chr1	82246546	82256569	+	coding	AL157944.1	lncRNA	ANTISENSE	ENSG00000233290	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1fc	L1	L1	L1FLnI	chr1	82528618	82538194	-	noncoding	AL157944.1	lncRNA	SENSE	ENSG00000233290	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1gc	L1	L1	L1FLnI	chr1	82528618	82537796	-	noncoding	AL157944.1	lncRNA	SENSE	ENSG00000233290	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1hc	L1	L1	L1FLnI	chr1	82537229	82546220	+	noncoding	AL157944.1	lncRNA	ANTISENSE	ENSG00000233290	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1ic	L1	L1	L1FLnI	chr1	83163922	83174081	+	coding	LINC01362	lncRNA	SENSE	ENSG00000230817	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1jc	L1	L1	L1FLnI	chr1	83178676	83188701	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01362	ENSG00000230817	11861	AC116099.1	ENSG00000285782	208854	None	None
L1FLnI_1p31.1kc	L1	L1	L1FLnI	chr1	83260109	83270131	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01362	ENSG00000230817	93294	AC116099.1	ENSG00000285782	127424	None	None
L1FLnI_1p31.1lc	L1	L1	L1FLnI	chr1	83349915	83359965	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC116099.1	ENSG00000285782	37590	LINC01362	ENSG00000230817	183100	None	None
L1FLnI_1p31.1mc	L1	L1	L1FLnI	chr1	83355968	83364494	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC116099.1	ENSG00000285782	33061	LINC01362	ENSG00000230817	189153	None	None
L1FLnI_1p31.1nc	L1	L1	L1FLnI	chr1	83586967	83598332	-	noncoding	LINC01725	lncRNA	SENSE	ENSG00000233008	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:83587432-83587440
L1FLnI_1p31.1oc	L1	L1	L1FLnI	chr1	83586967	83596142	-	noncoding	LINC01725	lncRNA	SENSE	ENSG00000233008	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:83587432-83587440
L1FLnI_1p31.1pc	L1	L1	L1FLnI	chr1	83684019	83693059	-	coding	LINC01725	lncRNA	SENSE	ENSG00000233008	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_1p31.1d	L1	L1	L1FLI	chr1	84051364	84059409	-	coding	AC104454.2	lncRNA	ANTISENSE	ENSG00000285201	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p31.1qc	L1	L1	L1FLnI	chr1	84157835	84167305	-	noncoding	PRKACB	protein_coding	ANTISENSE	ENSG00000142875	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:84164278-84164283,chr1:84164293-84164331,chr1:84164333-84164360,chr1:84164370-84164387,chr1:84164669-84164679,chr1:84164684-84164717,chr1:84164774-84164781,chr1:84164786-84164797,chr1:84164873-84164888,chr1:84164891-84164919,chr1:84164927-84164938,chr1:84164962-84164969,chr1:84164974-84164975
L1FLnI_1p31.1rc	L1	L1	L1FLnI	chr1	84228432	84238440	-	coding	PRKACB	protein_coding	ANTISENSE	ENSG00000142875	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr1:84235178-84235189,chr1:84235712-84235729,chr1:84235943-84235980,chr1:84236436-84236449,chr1:84236488-84236501,chr1:84236599-84236641,chr1:84236672-84236755
L1FLnI_1p31.1sc	L1	L1	L1FLnI	chr1	84331237	84339796	-	noncoding	SAMD13	protein_coding	ANTISENSE	ENSG00000203943	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.3a	L1	L1	L1FLnI	chr1	84439270	84449740	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DNASE2B	ENSG00000137976	24252	AL844170.1	ENSG00000285361	27299	None	None
L1FLnI_1p22.3b	L1	L1	L1FLnI	chr1	85504853	85515042	+	coding	DDAH1,AC092807.4	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000153904,ENSG00000282057	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.3c	L1	L1	L1FLnI	chr1	85638368	85648524	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092807.2	ENSG00000230285	37634	ZNHIT6	ENSG00000117174	893	None	None
L1FLnI_1p22.3d	L1	L1	L1FLnI	chr1	85745021	85755048	+	coding	COL24A1	protein_coding	ANTISENSE	ENSG00000171502	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.3e	L1	L1	L1FLnI	chr1	85824429	85834444	-	coding	COL24A1	protein_coding	SENSE	ENSG00000171502	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.3f	L1	L1	L1FLnI	chr1	85824442	85834444	-	coding	COL24A1	protein_coding	SENSE	ENSG00000171502	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.3g	L1	L1	L1FLnI	chr1	85865819	85874338	+	coding	COL24A1	protein_coding	ANTISENSE	ENSG00000171502	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_1p22.3	L1	L1	L1ORF2	chr1	85926067	85934114	+	coding	COL24A1	protein_coding	ANTISENSE	ENSG00000171502	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.3h	L1	L1	L1FLnI	chr1	85972135	85981129	+	noncoding	COL24A1	protein_coding	ANTISENSE	ENSG00000171502	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.3i	L1	L1	L1FLnI	chr1	86068322	86078492	+	noncoding	COL24A1	protein_coding	ANTISENSE	ENSG00000171502	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.3j	L1	L1	L1FLnI	chr1	86100747	86109565	-	coding	COL24A1	protein_coding	SENSE	ENSG00000171502	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.3k	L1	L1	L1FLnI	chr1	86161862	86171989	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02795	ENSG00000285210	116715	COL24A1	ENSG00000171502	4919	None	None
L1FLnI_1p22.3l	L1	L1	L1FLnI	chr1	86326748	86335476	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02795	ENSG00000285210	6037	ODF2L	ENSG00000122417	11348	None	chr1:86329048-86329057,chr1:86331463-86331480
L1FLnI_1p22.3m	L1	L1	L1FLnI	chr1	86625053	86633998	-	coding	CLCA4-AS1	lncRNA	SENSE	ENSG00000236915	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.3n	L1	L1	L1FLnI	chr1	86653944	86664111	+	noncoding	CLCA4-AS1,CLCA3P	lncRNA,transcribed_unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000236915,ENSG00000153923	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.3o	L1	L1	L1FLnI	chr1	86663809	86672617	+	noncoding	CLCA4-AS1	lncRNA	ANTISENSE	ENSG00000236915	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_1p22.3	L1	L1	L1FLI	chr1	86678068	86686114	-	coding	CLCA4-AS1	lncRNA	SENSE	ENSG00000236915	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.3p	L1	L1	L1FLnI	chr1	87540190	87551514	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PKN2-AS1	ENSG00000237505	69289	RNA5SP52	ENSG00000199318	86817	None	chr1:87546939-87546940
L1FLnI_1p22.2a	L1	L1	L1FLnI	chr1	88338344	88348367	+	coding	PKN2-AS1	lncRNA	ANTISENSE	ENSG00000237505	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.2b	L1	L1	L1FLnI	chr1	88428527	88440099	+	noncoding	PKN2-AS1	lncRNA	ANTISENSE	ENSG00000237505	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.2c	L1	L1	L1FLnI	chr1	88712278	88721954	-	coding	PKN2	protein_coding	ANTISENSE	ENSG00000065243	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.2d	L1	L1	L1FLnI	chr1	89028035	89038190	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GBP1	ENSG00000117228	14129	GBP3	ENSG00000117226	5141	chr1:89034941-89035279	None
L1FLnI_1p22.2e	L1	L1	L1FLnI	chr1	89068105	89078488	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GBP1	ENSG00000117228	2875	PTGES3P1	ENSG00000234518	25797	chr1:89068790-89069114,chr1:89070066-89070332	None
L1FLnI_1p22.2f	L1	L1	L1FLnI	chr1	89130000	89138958	+	noncoding	GBP2,AC104459.1,GBP7	protein_coding,lncRNA,protein_coding	ANTISENSE,SENSE,ANTISENSE	ENSG00000162645,ENSG00000286802,ENSG00000213512	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr1:89129913-89130169	chr1:89130020-89130029
L1FLnI_1p22.2g	L1	L1	L1FLnI	chr1	89130000	89139588	+	noncoding	GBP2,AC104459.1,GBP7	protein_coding,lncRNA,protein_coding	ANTISENSE,SENSE,ANTISENSE	ENSG00000162645,ENSG00000286802,ENSG00000213512	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr1:89129913-89130169	chr1:89130020-89130029
L1FLnI_1p22.2h	L1	L1	L1FLnI	chr1	89151319	89160868	+	coding	GBP7	protein_coding	ANTISENSE	ENSG00000213512	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.2i	L1	L1	L1FLnI	chr1	89230430	89240244	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GBP5	ENSG00000154451	18706	AC099063.4	ENSG00000284734	23390	None	None
L1FLnI_1p22.2j	L1	L1	L1FLnI	chr1	89230430	89238959	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GBP5	ENSG00000154451	19991	AC099063.4	ENSG00000284734	23390	None	None
L1FLnI_1p22.2k	L1	L1	L1FLnI	chr1	89244763	89254317	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099063.4	ENSG00000284734	37723	GBP5	ENSG00000154451	4633	None	None
L1FLnI_1p22.2l	L1	L1	L1FLnI	chr1	89412081	89422115	-	coding	GBP1P1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000225492	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.2m	L1	L1	L1FLnI	chr1	89469162	89479959	+	coding	AL596214.1	lncRNA	ANTISENSE	ENSG00000286548	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr1:89476789-89476810	None
L1FLnI_1p22.2n	L1	L1	L1FLnI	chr1	89487490	89497636	+	coding	AL596214.1	lncRNA	ANTISENSE	ENSG00000286548	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.2o	L1	L1	L1FLnI	chr1	89746528	89756553	-	coding	LRRC8C,AC093423.3	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000171488,ENSG00000271949	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:89755725-89755849	None
L1FLnI_1p22.2p	L1	L1	L1FLnI	chr1	90056782	90066812	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC098656.1	ENSG00000287406	175276	AL161797.1	ENSG00000287015	9673	None	None
L1FLnI_1p22.2q	L1	L1	L1FLnI	chr1	90163347	90173487	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL161797.1	ENSG00000287015	116238	AC098656.1	ENSG00000287406	68601	None	None
L1FLnI_1p22.2r	L1	L1	L1FLnI	chr1	90244086	90253323	+	noncoding	AC098656.1	lncRNA	SENSE	ENSG00000287406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.2s	L1	L1	L1FLnI	chr1	90488543	90498888	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02787	ENSG00000229201	12022	AL627316.1	ENSG00000287372	68147	None	chr1:90497037-90497039
L1FLnI_1p22.2t	L1	L1	L1FLnI	chr1	90994072	91004196	+	coding	ZNF644	protein_coding	ANTISENSE	ENSG00000122482	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.2u	L1	L1	L1FLnI	chr1	91182196	91192583	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HFM1	ENSG00000162669	68183	RPL5P6	ENSG00000232393	157392	None	None
L1FLnI_1p22.2v	L1	L1	L1FLnI	chr1	91208089	91217447	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL5P6	ENSG00000232393	183285	HFM1	ENSG00000162669	43319	None	None
L1FLnI_1p22.2w	L1	L1	L1FLnI	chr1	91293308	91303449	+	noncoding	HFM1	protein_coding	ANTISENSE	ENSG00000162669	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.2x	L1	L1	L1FLnI	chr1	91293308	91303455	+	noncoding	HFM1	protein_coding	ANTISENSE	ENSG00000162669	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.2y	L1	L1	L1FLnI	chr1	91355231	91364702	+	noncoding	HFM1	protein_coding	ANTISENSE	ENSG00000162669	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.2z	L1	L1	L1FLnI	chr1	91363139	91373247	+	coding	HFM1	protein_coding	ANTISENSE	ENSG00000162669	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.2aa	L1	L1	L1FLnI	chr1	91421871	91432394	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDC7	ENSG00000097046	68457	HFM1	ENSG00000162669	17015	None	None
L1FLnI_1p22.2ba	L1	L1	L1FLnI	chr1	91438319	91447758	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HFM1	ENSG00000162669	33463	CDC7	ENSG00000097046	53093	None	None
L1FLnI_1p22.1a	L1	L1	L1FLnI	chr1	92231618	92241162	-	coding	C1orf146	protein_coding	ANTISENSE	ENSG00000203910	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.1b	L1	L1	L1FLnI	chr1	92249718	92259406	+	coding	GLMN	protein_coding	ANTISENSE	ENSG00000174842	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.1c	L1	L1	L1FLnI	chr1	92275987	92286124	+	coding	GLMN	protein_coding	ANTISENSE	ENSG00000174842	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.1d	L1	L1	L1FLnI	chr1	92384904	92394985	+	coding	RPAP2	protein_coding	SENSE	ENSG00000122484	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.1e	L1	L1	L1FLnI	chr1	92430266	92440388	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GFI1	ENSG00000162676	32655	RN7SL824P	ENSG00000242764	27581	None	None
L1FLnI_1p22.1f	L1	L1	L1FLnI	chr1	92526706	92536421	+	coding	EVI5	protein_coding	ANTISENSE	ENSG00000067208	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.1g	L1	L1	L1FLnI	chr1	92629168	92639297	-	coding	EVI5	protein_coding	SENSE	ENSG00000067208	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.1h	L1	L1	L1FLnI	chr1	92679726	92688831	+	noncoding	EVI5	protein_coding	ANTISENSE	ENSG00000067208	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.1i	L1	L1	L1FLnI	chr1	92711990	92722178	+	coding	EVI5	protein_coding	ANTISENSE	ENSG00000067208	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:92714059-92714069,chr1:92714081-92714090
L1FLnI_1p22.1j	L1	L1	L1FLnI	chr1	92888025	92898166	+	coding	DIPK1A	protein_coding	ANTISENSE	ENSG00000154511	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.1k	L1	L1	L1FLnI	chr1	93401459	93411598	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	FNBP1L	ENSG00000137942	36533	AL137159.1	ENSG00000207379	15642	None	None
L1FLnI_1p22.1l	L1	L1	L1FLnI	chr1	93790154	93800181	-	coding	BCAR3	protein_coding	SENSE	ENSG00000137936	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.1m	L1	L1	L1FLnI	chr1	93852234	93862372	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL049796.1	ENSG00000260464	3295	DNTTIP2	ENSG00000067334	3912	None	None
L1FLnI_1p22.1n	L1	L1	L1FLnI	chr1	93910238	93920276	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CHCHD2P5	ENSG00000223490	992	GCLM	ENSG00000023909	782	None	None
L1FLnI_1p22.1o	L1	L1	L1FLnI	chr1	93925150	93933870	+	noncoding	MTCO3P21,MTATP6P13,AL117351.2,MTCO2P21,MTCO1P21	unprocessed_pseudogene,unprocessed_pseudogene,unprocessed_pseudogene,unprocessed_pseudogene,unprocessed_pseudogene	ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000232752,ENSG00000229842,ENSG00000250890,ENSG00000236689,ENSG00000226960	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p22.1p	L1	L1	L1FLnI	chr1	94130621	94140757	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ABCA4	ENSG00000198691	9473	AC093579.1	ENSG00000233482	4354	None	None
L1FLnI_1p22.1q	L1	L1	L1FLnI	chr1	94287007	94297115	-	coding	ARHGAP29-AS1	lncRNA	ANTISENSE	ENSG00000226835	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:94287376-94287380
L1FLnI_1p21.3a	L1	L1	L1FLnI	chr1	94363761	94373910	-	coding	ARHGAP29-AS1	lncRNA	ANTISENSE	ENSG00000226835	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.3b	L1	L1	L1FLnI	chr1	94506495	94515723	-	coding	ABCD3	protein_coding	ANTISENSE	ENSG00000117528	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.3c	L1	L1	L1FLnI	chr1	94756320	94765114	+	coding	SLC44A3-AS1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000224081	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.3d	L1	L1	L1FLnI	chr1	95157993	95168127	-	coding	TLCD4,TLCD4-RWDD3,AC092802.2	protein_coding,protein_coding,lncRNA	ANTISENSE,ANTISENSE,SENSE	ENSG00000152078,ENSG00000271092,ENSG00000226026	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.3e	L1	L1	L1FLnI	chr1	95158013	95168127	-	coding	TLCD4,TLCD4-RWDD3,AC092802.2	protein_coding,protein_coding,lncRNA	ANTISENSE,ANTISENSE,SENSE	ENSG00000152078,ENSG00000271092,ENSG00000226026	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.3f	L1	L1	L1FLnI	chr1	95210191	95220490	-	noncoding	TLCD4-RWDD3,AC092802.2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000271092,ENSG00000226026	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.3g	L1	L1	L1FLnI	chr1	95291739	95301758	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01760	ENSG00000228504	9170	AC092802.5	ENSG00000287919	4037	None	None
L1FLnI_1p21.3h	L1	L1	L1FLnI	chr1	95479382	95489747	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01761	ENSG00000233907	26	LINC02607	ENSG00000228971	20312	None	None
L1FLnI_1p21.3i	L1	L1	L1FLnI	chr1	95480638	95489747	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01761	ENSG00000233907	1282	LINC02607	ENSG00000228971	20312	None	None
L1FLnI_1p21.3j	L1	L1	L1FLnI	chr1	95736701	95746635	-	noncoding	LINC02607,AL683887.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000228971,ENSG00000271252	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:95743007-95743016,chr1:95743090-95743101,chr1:95743369-95743371
L1FLnI_1p21.3k	L1	L1	L1FLnI	chr1	95793410	95803041	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02607	ENSG00000228971	11068	LINC02790	ENSG00000237435	134860	None	None
L1FLnI_1p21.3l	L1	L1	L1FLnI	chr1	95968447	95978868	-	noncoding	LINC02790	lncRNA	ANTISENSE	ENSG00000237435	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.3m	L1	L1	L1FLnI	chr1	95968458	95978868	-	noncoding	LINC02790	lncRNA	ANTISENSE	ENSG00000237435	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.3n	L1	L1	L1FLnI	chr1	96051081	96061233	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-130P	ENSG00000200800	164668	LINC02790	ENSG00000237435	28191	chr1:96059728-96060151,chr1:96060456-96061440	chr1:96060929-96060949,chr1:96059815-96059819
L1FLnI_1p21.3o	L1	L1	L1FLnI	chr1	96065880	96074383	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-130P	ENSG00000200800	151518	LINC02790	ENSG00000237435	42990	chr1:96072602-96072980	None
L1FLnI_1p21.3p	L1	L1	L1FLnI	chr1	96282771	96293418	-	noncoding	LINC01787	lncRNA	SENSE	ENSG00000231987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.3q	L1	L1	L1FLnI	chr1	96372322	96382761	+	coding	LINC01787	lncRNA	ANTISENSE	ENSG00000231987	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.3r	L1	L1	L1FLnI	chr1	96428189	96436936	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	EEF1A1P11	ENSG00000228502	9994	UBE2WP1	ENSG00000234422	9256	None	None
L1FLnI_1p21.3s	L1	L1	L1FLnI	chr1	96432941	96443091	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EEF1A1P11	ENSG00000228502	3839	UBE2WP1	ENSG00000234422	14008	None	None
L1FLnI_1p21.3t	L1	L1	L1FLnI	chr1	96600888	96610900	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFS5P2	ENSG00000234226	16161	RPL7P9	ENSG00000137970	67974	None	None
L1FLnI_1p21.3u	L1	L1	L1FLnI	chr1	96647760	96657910	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFS5P2	ENSG00000234226	63033	RPL7P9	ENSG00000137970	20964	None	None
L1FLnI_1p21.3v	L1	L1	L1FLnI	chr1	96852697	96862862	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DPYD	ENSG00000188641	214881	PTBP2	ENSG00000117569	28959	None	None
L1FLnI_1p21.3w	L1	L1	L1FLnI	chr1	96869245	96877744	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DPYD	ENSG00000188641	199999	PTBP2	ENSG00000117569	45507	None	None
L1FLnI_1p21.3x	L1	L1	L1FLnI	chr1	97037399	97048383	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DPYD	ENSG00000188641	29360	PTBP2	ENSG00000117569	213661	None	None
L1FLnI_1p21.3y	L1	L1	L1FLnI	chr1	97354339	97364459	+	noncoding	DPYD	protein_coding	ANTISENSE	ENSG00000188641	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.3z	L1	L1	L1FLnI	chr1	97951919	97961680	+	noncoding	DPYD,MIR137HG	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000188641,ENSG00000225206	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:97953829-97953896,chr1:97960132-97960509	chr1:97957400-97957415
L1FLnI_1p21.3aa	L1	L1	L1FLnI	chr1	98229097	98238874	+	noncoding	LINC01776	lncRNA	SENSE	ENSG00000226053	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.3ba	L1	L1	L1FLnI	chr1	98618763	98628272	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC095031.1	ENSG00000280040	32116	LINC01776	ENSG00000226053	346105	None	None
L1FLnI_1p21.3ca	L1	L1	L1FLnI	chr1	98633368	98643404	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01776	ENSG00000226053	360710	AC095031.1	ENSG00000280040	16984	None	None
L1FLnI_1p21.3da	L1	L1	L1FLnI	chr1	98875140	98885234	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PLPPR5	ENSG00000117598	5011	SNX7	ENSG00000162627	114640	None	None
L1FLnI_1p21.3ea	L1	L1	L1FLnI	chr1	99124590	99133910	-	noncoding	AL445433.2	lncRNA	ANTISENSE	ENSG00000232825	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.2a	L1	L1	L1FLnI	chr1	99399326	99409473	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL365220.1	ENSG00000233983	54905	PLPPR4	ENSG00000117600	89736	None	None
L1FLnI_1p21.2b	L1	L1	L1FLnI	chr1	99414785	99424300	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PLPPR4	ENSG00000117600	105195	AL365220.1	ENSG00000233983	40078	None	None
L1FLnI_1p21.2c	L1	L1	L1FLnI	chr1	100196104	100206588	+	noncoding	DBT,RPL23AP90	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000137992,ENSG00000271415	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.2d	L1	L1	L1FLnI	chr1	100597740	100607884	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01349	ENSG00000230402	19165	AC099670.1	ENSG00000213421	10309	None	None
L1FLnI_1p21.2e	L1	L1	L1FLnI	chr1	100631740	100641890	-	coding	LINC01349,AC099670.3	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000230402,ENSG00000285525	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.2f	L1	L1	L1FLnI	chr1	100642993	100652384	+	noncoding	AC099670.2	processed_pseudogene	SENSE	ENSG00000224685	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.2g	L1	L1	L1FLnI	chr1	100642993	100652116	+	noncoding	AC099670.2	processed_pseudogene	SENSE	ENSG00000224685	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.2h	L1	L1	L1FLnI	chr1	100662483	100672620	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	VCAM1	ENSG00000162692	47122	AC099670.2	ENSG00000224685	10216	None	None
L1FLnI_1p21.2i	L1	L1	L1FLnI	chr1	100676428	100685990	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	VCAM1	ENSG00000162692	33752	AC099670.2	ENSG00000224685	24161	None	None
L1FLnI_1p21.2j	L1	L1	L1FLnI	chr1	100686786	100696072	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VCAM1	ENSG00000162692	23670	AC099670.2	ENSG00000224685	34519	None	None
L1FLnI_1p21.2k	L1	L1	L1FLnI	chr1	100816463	100826711	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VCAM1	ENSG00000162692	77418	EXTL2	ENSG00000162694	45661	None	None
L1FLnI_1p21.2l	L1	L1	L1FLnI	chr1	100839209	100849599	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	EXTL2	ENSG00000162694	22773	VCAM1	ENSG00000162692	100164	chr1:100847519-100847691	None
L1FLnI_1p21.2m	L1	L1	L1FLnI	chr1	100944185	100953615	-	noncoding	SLC30A7	protein_coding	ANTISENSE	ENSG00000162695	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.2n	L1	L1	L1FLnI	chr1	101406738	101417225	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01307	ENSG00000231671	16435	LINC01709	ENSG00000226715	222284	chr1:101407697-101408105,chr1:101410286-101410777	chr1:101408158-101408174,chr1:101408473-101408484,chr1:101410186-101410201,chr1:101410207-101410218,chr1:101410219-101410232,chr1:101410248-101410259,chr1:101410287-101410311
L1FLnI_1p21.2o	L1	L1	L1FLnI	chr1	101406738	101415459	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01307	ENSG00000231671	16435	LINC01709	ENSG00000226715	224050	chr1:101407697-101408105,chr1:101410286-101410777	chr1:101408158-101408174,chr1:101408473-101408484,chr1:101410186-101410201,chr1:101410207-101410218,chr1:101410219-101410232,chr1:101410248-101410259,chr1:101410287-101410311
L1FLnI_1p21.2p	L1	L1	L1FLnI	chr1	101423532	101432130	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01709	ENSG00000226715	207379	LINC01307	ENSG00000231671	33229	chr1:101429054-101429106	None
L1FLnI_1p21.2q	L1	L1	L1FLnI	chr1	101647153	101657754	-	noncoding	LINC01709	lncRNA	ANTISENSE	ENSG00000226715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.1a	L1	L1	L1FLnI	chr1	102049505	102058027	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OLFM3	ENSG00000118733	52475	AC114485.1	ENSG00000233359	141712	None	None
L1FLnI_1p21.1b	L1	L1	L1FLnI	chr1	102054494	102065099	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OLFM3	ENSG00000118733	57464	AC114485.1	ENSG00000233359	134640	None	None
L1FLnI_1p21.1c	L1	L1	L1FLnI	chr1	102204831	102214920	-	noncoding	AC114485.1	lncRNA	SENSE	ENSG00000233359	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.1d	L1	L1	L1FLnI	chr1	102438585	102448729	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC114485.1	ENSG00000233359	48955	AC099567.1	ENSG00000230864	314593	None	None
L1FLnI_1p21.1e	L1	L1	L1FLnI	chr1	102617493	102626616	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099567.1	ENSG00000230864	136706	AC114485.1	ENSG00000233359	227863	None	None
L1FLnI_1p21.1f	L1	L1	L1FLnI	chr1	102822997	102833154	+	noncoding	AC099567.1	lncRNA	ANTISENSE	ENSG00000230864	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.1g	L1	L1	L1FLnI	chr1	102927604	102937613	-	coding	COL11A1	protein_coding	SENSE	ENSG00000060718	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.1h	L1	L1	L1FLnI	chr1	103045122	103055250	-	coding	COL11A1	protein_coding	SENSE	ENSG00000060718	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.1i	L1	L1	L1FLnI	chr1	103062240	103070791	+	noncoding	COL11A1	protein_coding	ANTISENSE	ENSG00000060718	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.1j	L1	L1	L1FLnI	chr1	103373718	103383840	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	COL11A1	ENSG00000060718	264846	AC095032.2	ENSG00000230759	31039	None	None
L1FLnI_1p21.1k	L1	L1	L1FLnI	chr1	104005635	104015236	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092506.1	ENSG00000215869	57747	AL136455.1	ENSG00000225191	77829	None	None
L1FLnI_1p21.1l	L1	L1	L1FLnI	chr1	104005647	104015236	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092506.1	ENSG00000215869	57747	AL136455.1	ENSG00000225191	77841	None	None
L1FLnI_1p21.1m	L1	L1	L1FLnI	chr1	104217512	104226712	-	noncoding	AC092506.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000215869	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p21.1n	L1	L1	L1FLnI	chr1	104331478	104340141	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591888.1	ENSG00000285981	658265	AC092506.1	ENSG00000215869	104800	None	None
L1FLnI_1p21.1o	L1	L1	L1FLnI	chr1	104331506	104340141	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591888.1	ENSG00000285981	658265	AC092506.1	ENSG00000215869	104828	None	None
L1FLnI_1p21.1p	L1	L1	L1FLnI	chr1	104658355	104668372	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL591888.1	ENSG00000285981	330034	AC092506.1	ENSG00000215869	431677	None	None
L1ORF2_1p21.1	L1	L1	L1ORF2	chr1	104769234	104777280	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL591888.1	ENSG00000285981	221126	AC092506.1	ENSG00000215869	542556	None	None
L1FLnI_1p21.1q	L1	L1	L1FLnI	chr1	104829306	104838081	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092506.1	ENSG00000215869	602628	AL591888.1	ENSG00000285981	160325	None	None
L1FLnI_1p21.1r	L1	L1	L1FLnI	chr1	104843335	104853364	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL591888.1	ENSG00000285981	145042	AC092506.1	ENSG00000215869	616657	None	None
L1FLnI_1p21.1s	L1	L1	L1FLnI	chr1	104934650	104944680	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL591888.1	ENSG00000285981	53726	AC092506.1	ENSG00000215869	707972	None	None
L1FLnI_1p21.1t	L1	L1	L1FLnI	chr1	105064822	105073977	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDK4P1	ENSG00000225036	360017	AL591888.1	ENSG00000285981	32457	None	None
L1FLnI_1p21.1u	L1	L1	L1FLnI	chr1	105249156	105257921	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDK4P1	ENSG00000225036	176073	AL591888.1	ENSG00000285981	216791	None	None
L1FLnI_1p21.1v	L1	L1	L1FLnI	chr1	105318899	105327659	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDK4P1	ENSG00000225036	106335	AL591888.1	ENSG00000285981	286534	None	None
L1FLnI_1p21.1w	L1	L1	L1FLnI	chr1	105637907	105648471	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01676	ENSG00000230768	18916	SEPTIN2P1	ENSG00000227850	49568	None	None
L1FLnI_1p21.1x	L1	L1	L1FLnI	chr1	105878336	105888655	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512844.2	ENSG00000237897	2038	SEPTIN2P1	ENSG00000227850	180118	None	None
L1FLnI_1p21.1y	L1	L1	L1FLnI	chr1	105878345	105888238	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512844.2	ENSG00000237897	2455	SEPTIN2P1	ENSG00000227850	180127	None	None
L1FLnI_1p21.1z	L1	L1	L1FLnI	chr1	106160421	106169907	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL355306.2	ENSG00000237480	35857	AL499605.1	ENSG00000270342	374435	None	None
L1FLnI_1p21.1aa	L1	L1	L1FLnI	chr1	106258246	106267769	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL499605.1	ENSG00000270342	276573	AL355306.2	ENSG00000237480	133682	None	None
L1FLnI_1p21.1ba	L1	L1	L1FLnI	chr1	106325926	106336037	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL355306.2	ENSG00000237480	201362	AL499605.1	ENSG00000270342	208305	None	None
L1FLnI_1p21.1ca	L1	L1	L1FLnI	chr1	106375638	106384158	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL499605.1	ENSG00000270342	160184	AL355306.2	ENSG00000237480	251074	None	None
L1FLnI_1p21.1da	L1	L1	L1FLnI	chr1	106551298	106559811	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL499605.1	ENSG00000270342	6554	AL596327.1	ENSG00000270976	220412	None	None
L1FLnI_1p21.1ea	L1	L1	L1FLnI	chr1	106622289	106631966	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL596327.1	ENSG00000270976	148257	AL499605.1	ENSG00000270342	77545	None	None
L1FLnI_1p13.3a	L1	L1	L1FLnI	chr1	106849457	106859862	+	noncoding	LINC01661	lncRNA	SENSE	ENSG00000237460	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p13.3b	L1	L1	L1FLnI	chr1	107728742	107738866	+	coding	VAV3	protein_coding	ANTISENSE	ENSG00000134215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p13.3c	L1	L1	L1FLnI	chr1	107728742	107738876	+	coding	VAV3	protein_coding	ANTISENSE	ENSG00000134215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p13.3d	L1	L1	L1FLnI	chr1	107801349	107810013	-	noncoding	VAV3	protein_coding	SENSE	ENSG00000134215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:107804057-107804452	None
L1FLnI_1p13.3e	L1	L1	L1FLnI	chr1	108161298	108171309	-	coding	SLC25A24	protein_coding	SENSE	ENSG00000085491	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p13.3f	L1	L1	L1FLnI	chr1	108202930	108213402	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NBPF4	ENSG00000196427	9939	AL359258.3	ENSG00000280186	187	None	None
L1FLnI_1p13.3g	L1	L1	L1FLnI	chr1	108357821	108367917	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NBPF5P	ENSG00000243967	7921	SLC25A24P1	ENSG00000241361	19968	None	None
L1FLnI_1p13.3h	L1	L1	L1FLnI	chr1	108357822	108367917	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NBPF5P	ENSG00000243967	7921	SLC25A24P1	ENSG00000241361	19969	None	None
L1FLnI_1p13.3i	L1	L1	L1FLnI	chr1	108538845	108548524	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL392088.1	ENSG00000226483	29602	FAM102B	ENSG00000162636	11565	None	None
L1FLnI_1p13.3j	L1	L1	L1FLnI	chr1	109742282	109752441	-	coding	GSTM5,AL158847.1,EPS8L3	protein_coding,lncRNA,protein_coding	ANTISENSE,ANTISENSE,SENSE	ENSG00000134201,ENSG00000241720,ENSG00000198758	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p13.3k	L1	L1	L1FLnI	chr1	110860745	110870229	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR11I1P	ENSG00000232791	5853	CD53	ENSG00000143119	959	None	None
L1FLnI_1p13.3l	L1	L1	L1FLnI	chr1	110929763	110939608	+	noncoding	AL360270.2	lncRNA	ANTISENSE	ENSG00000261654	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr1:110936885-110937267	None
L1FLnI_1p13.3m	L1	L1	L1FLnI	chr1	111073033	111083155	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DRAM2	ENSG00000156171	34178	RNA5SP54	ENSG00000252760	31108	None	None
L1FLnI_1p13.2a	L1	L1	L1FLnI	chr1	111263216	111272080	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CHIAP2	ENSG00000203878	7979	CHIAP1	ENSG00000236040	6501	None	None
L1FLnI_1p13.2b	L1	L1	L1FLnI	chr1	111292033	111301917	+	coding	CHIA	protein_coding	SENSE	ENSG00000134216	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p13.2c	L1	L1	L1FLnI	chr1	111331713	111341871	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL356387.2	ENSG00000232240	7638	PIFO	ENSG00000173947	4729	None	chr1:111332458-111332467
L1FLnI_1p13.2d	L1	L1	L1FLnI	chr1	111390263	111400395	+	coding	PGBP	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000227179	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p13.2e	L1	L1	L1FLnI	chr1	111677760	111686772	+	noncoding	RAP1A,INKA2	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000116473,ENSG00000197852	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p13.2f	L1	L1	L1FLnI	chr1	112154301	112164310	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL445426.1	ENSG00000231246	12924	LINC01750	ENSG00000231437	155459	None	None
L1FLnI_1p13.2g	L1	L1	L1FLnI	chr1	112198644	112208803	-	coding	AL445426.1	lncRNA	SENSE	ENSG00000231246	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p13.2h	L1	L1	L1FLnI	chr1	112208170	112218305	+	coding	AL445426.1	lncRNA	ANTISENSE	ENSG00000231246	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p13.2i	L1	L1	L1FLnI	chr1	112217920	112227938	+	coding	AL445426.1	lncRNA	ANTISENSE	ENSG00000231246	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p13.2j	L1	L1	L1FLnI	chr1	113472764	113482882	-	noncoding	MAGI3	protein_coding	ANTISENSE	ENSG00000081026	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p13.2k	L1	L1	L1FLnI	chr1	113484706	113495015	+	noncoding	MAGI3	protein_coding	SENSE	ENSG00000081026	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_1p13.2	L1	L1	L1FLI	chr1	113496199	113504246	+	coding	MAGI3	protein_coding	SENSE	ENSG00000081026	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p13.2l	L1	L1	L1FLnI	chr1	113625718	113634919	-	noncoding	MAGI3	protein_coding	ANTISENSE	ENSG00000081026	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p13.2m	L1	L1	L1FLnI	chr1	113633062	113642880	-	coding	MAGI3	protein_coding	ANTISENSE	ENSG00000081026	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p13.2n	L1	L1	L1FLnI	chr1	114182131	114191655	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL121999.1	ENSG00000232895	14772	SYT6	ENSG00000134207	28212	None	None
L1FLnI_1p13.2o	L1	L1	L1FLnI	chr1	114300493	114310620	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MRPL57P1	ENSG00000273698	21218	AL035410.2	ENSG00000271419	43366	None	None
L1FLnI_1p13.2p	L1	L1	L1FLnI	chr1	114916359	114924896	-	noncoding	SYCP1	protein_coding	ANTISENSE	ENSG00000198765	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p13.2q	L1	L1	L1FLnI	chr1	114928938	114939059	+	coding	SYCP1	protein_coding	SENSE	ENSG00000198765	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p13.2r	L1	L1	L1FLnI	chr1	115013553	115023689	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TSHB	ENSG00000134200	6137	SYCP1	ENSG00000198765	18183	None	None
L1FLnI_1p13.2s	L1	L1	L1FLnI	chr1	115144323	115154459	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01765	ENSG00000233730	41665	AL049825.1	ENSG00000285698	116308	None	None
L1FLnI_1p13.2t	L1	L1	L1FLnI	chr1	115382846	115392975	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512638.1	ENSG00000226973	78966	NGF-AS1	ENSG00000228035	14774	None	None
L1FLnI_1p13.1a	L1	L1	L1FLnI	chr1	115632982	115643429	-	noncoding	VANGL1	protein_coding	ANTISENSE	ENSG00000173218	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:115641878-115641900,chr1:115641945-115642012,chr1:115642018-115642032
L1FLnI_1p13.1b	L1	L1	L1FLnI	chr1	116048415	116058565	+	coding	SLC22A15	protein_coding	SENSE	ENSG00000163393	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p13.1c	L1	L1	L1FLnI	chr1	116048415	116058552	+	coding	SLC22A15	protein_coding	SENSE	ENSG00000163393	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p13.1d	L1	L1	L1FLnI	chr1	116085701	116097071	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MAB21L3	ENSG00000173212	14684	SLC22A15	ENSG00000163393	15647	None	chr1:116093707-116093710
L1FLnI_1p13.1e	L1	L1	L1FLnI	chr1	116781411	116789947	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FTH1P22	ENSG00000225079	5788	AL157904.1	ENSG00000272715	119202	None	None
L1FLnI_1p13.1f	L1	L1	L1FLnI	chr1	116971240	116980025	+	coding	PTGFRN	protein_coding	SENSE	ENSG00000134247	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p12a	L1	L1	L1FLnI	chr1	117214097	117224265	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	VTCN1	ENSG00000134258	3137	AL365264.1	ENSG00000277141	18947	None	None
L1FLnI_1p12b	L1	L1	L1FLnI	chr1	117352064	117362224	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358072.1	ENSG00000271427	2675	LINC01525	ENSG00000235202	30728	None	None
L1FLnI_1p12c	L1	L1	L1FLnI	chr1	117717175	117727333	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390877.2	ENSG00000270719	16933	PNRC2P1	ENSG00000228217	50754	None	None
L1FLnI_1p12d	L1	L1	L1FLnI	chr1	117740857	117751360	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PNRC2P1	ENSG00000228217	26727	AL390877.2	ENSG00000270719	40615	None	None
L1FLnI_1p12e	L1	L1	L1FLnI	chr1	117742595	117751360	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PNRC2P1	ENSG00000228217	26727	AL390877.2	ENSG00000270719	42353	None	None
L1FLnI_1p12f	L1	L1	L1FLnI	chr1	117763488	117773599	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PNRC2P1	ENSG00000228217	4488	AL390877.2	ENSG00000270719	63246	None	None
L1FLnI_1p12g	L1	L1	L1FLnI	chr1	117998338	118008444	-	noncoding	SPAG17	protein_coding	SENSE	ENSG00000155761	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p12h	L1	L1	L1FLnI	chr1	118229935	118238473	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL391557.1	ENSG00000287980	22884	RNA5SP56	ENSG00000222209	25899	None	None
L1FLnI_1p12i	L1	L1	L1FLnI	chr1	118277389	118287405	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP56	ENSG00000222209	12900	PSMC1P12	ENSG00000226126	326928	None	None
L1FLnI_1p12j	L1	L1	L1FLnI	chr1	118345886	118355404	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP56	ENSG00000222209	81397	PSMC1P12	ENSG00000226126	258929	None	None
L1FLnI_1p12k	L1	L1	L1FLnI	chr1	118352994	118361941	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP56	ENSG00000222209	88505	PSMC1P12	ENSG00000226126	252392	None	None
L1FLnI_1p12l	L1	L1	L1FLnI	chr1	118511288	118521422	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSMC1P12	ENSG00000226126	92911	RNA5SP56	ENSG00000222209	246799	None	None
L1FLnI_1p12m	L1	L1	L1FLnI	chr1	118539868	118549122	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP56	ENSG00000222209	275379	PSMC1P12	ENSG00000226126	65211	None	None
L1FLnI_1p12n	L1	L1	L1FLnI	chr1	118567734	118577750	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PSMC1P12	ENSG00000226126	36583	RNA5SP56	ENSG00000222209	303245	None	None
L1FLnI_1p12o	L1	L1	L1FLnI	chr1	118629328	118640287	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL139148.1	ENSG00000229911	72712	PSMC1P12	ENSG00000226126	13682	None	None
L1FLnI_1p12p	L1	L1	L1FLnI	chr1	118629328	118640283	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL139148.1	ENSG00000229911	72716	PSMC1P12	ENSG00000226126	13682	None	None
L1FLnI_1p12q	L1	L1	L1FLnI	chr1	118634255	118644415	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PSMC1P12	ENSG00000226126	18609	AL139148.1	ENSG00000229911	68584	None	None
L1FLnI_1p12r	L1	L1	L1FLnI	chr1	118827940	118838080	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL139148.1	ENSG00000229911	114262	TBX15	ENSG00000092607	44966	None	None
L1FLI_1p12	L1	L1	L1FLI	chr1	118851350	118859396	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL139148.1	ENSG00000229911	137672	TBX15	ENSG00000092607	23650	chr1:118858517-118858776	None
L1FLnI_1p12s	L1	L1	L1FLnI	chr1	119017133	119027148	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL139420.2	ENSG00000239216	15728	WARS2	ENSG00000116874	4068	None	None
L1FLnI_1p12t	L1	L1	L1FLnI	chr1	119112865	119123415	+	noncoding	WARS2	protein_coding	ANTISENSE	ENSG00000116874	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p12u	L1	L1	L1FLnI	chr1	119152012	119160917	-	noncoding	WARS2-AS1	lncRNA	ANTISENSE	ENSG00000231365	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p12v	L1	L1	L1FLnI	chr1	119400863	119410006	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HAO2	ENSG00000116882	6733	HSD3B2	ENSG00000203859	4925	None	None
L1FLnI_1p12w	L1	L1	L1FLnI	chr1	119400863	119409685	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HAO2	ENSG00000116882	6733	HSD3B2	ENSG00000203859	5246	None	None
L1FLnI_1p12x	L1	L1	L1FLnI	chr1	119494149	119504303	+	noncoding	GAPDHP58	processed_pseudogene	ANTISENSE	ENSG00000229570	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p12y	L1	L1	L1FLnI	chr1	120218488	120228630	-	coding	AC244669.2,AC244669.3	unprocessed_pseudogene,misc_RNA	ANTISENSE,SENSE	ENSG00000274642,ENSG00000277313	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p11.2a	L1	L1	L1FLnI	chr1	120477225	120487350	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NBPF8	ENSG00000270231	9486	AC241952.2	ENSG00000275131	2510	None	None
L1FLnI_1p11.2b	L1	L1	L1FLnI	chr1	120669792	120679929	+	coding	AC241952.2,AC247039.1	transcribed_unprocessed_pseudogene,misc_RNA	ANTISENSE,SENSE	ENSG00000275131,ENSG00000275933	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p11.2c	L1	L1	L1FLnI	chr1	121308927	121318363	-	coding	SRGAP2C,AC243994.1	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000171943,ENSG00000275129	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p11.2d	L1	L1	L1FLnI	chr1	121397949	121407969	+	coding	SRGAP2-AS1,LINC02798	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000230806,ENSG00000227082	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p11.2e	L1	L1	L1FLnI	chr1	121473626	121483777	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02798	ENSG00000227082	10118	AL592494.1	ENSG00000228826	10552	None	None
L1FLnI_1p11.2f	L1	L1	L1FLnI	chr1	121531736	121541761	-	coding	EMBP1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000231752	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p11.2g	L1	L1	L1FLnI	chr1	121570791	121580921	+	coding	EMBP1,LINC01691	transcribed_unprocessed_pseudogene,lncRNA	SENSE,ANTISENSE	ENSG00000231752,ENSG00000224857	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1p11.2h	L1	L1	L1FLnI	chr1	121580688	121591104	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC242852.1	ENSG00000276118	21752076	LINC01691	ENSG00000224857	164	None	None
L1FLnI_1p11.2i	L1	L1	L1FLnI	chr1	121597708	121607819	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC242852.1	ENSG00000276118	21735361	LINC01691	ENSG00000224857	17184	None	None
L1FLnI_1q11a	L1	L1	L1FLnI	chr1	124961345	124971367	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC242852.1	ENSG00000276118	18371813	LINC01691	ENSG00000224857	3380821	None	None
L1FLnI_1q11b	L1	L1	L1FLnI	chr1	125004233	125013558	+	NA	None	NA	NA	None	INTERGENIC	NA	NA	LINC01691	ENSG00000224857	3423709	AC242852.1	ENSG00000276118	18329622	None	None
L1FLnI_1q11c	L1	L1	L1FLnI	chr1	125011753	125021707	+	NA	None	NA	NA	None	INTERGENIC	NA	NA	LINC01691	ENSG00000224857	3431229	AC242852.1	ENSG00000276118	18321473	None	None
L1FLnI_1q12	L1	L1	L1FLnI	chr1	125119463	125129581	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01691	ENSG00000224857	3538939	AC242852.1	ENSG00000276118	18213599	None	None
L1FLnI_1q21.1a	L1	L1	L1FLnI	chr1	143557592	143567624	-	coding	AC239859.1	unprocessed_pseudogene	ANTISENSE	ENSG00000203825	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q21.1b	L1	L1	L1FLnI	chr1	143576766	143586930	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NBPF17P	ENSG00000179571	8286	AC239859.1	ENSG00000203825	3932	None	None
L1FLnI_1q21.1c	L1	L1	L1FLnI	chr1	144961717	144971158	+	coding	SRGAP2B,AC242498.1	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000196369,ENSG00000271644	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q21.1d	L1	L1	L1FLnI	chr1	145552828	145562946	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NBPF25P	ENSG00000272150	9399	AC239860.1	ENSG00000275064	32234	None	None
L1FLnI_1q21.1e	L1	L1	L1FLnI	chr1	146716694	146726718	-	coding	HYDIN2	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000276975	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:146261741-148712511
L1FLnI_1q21.1f	L1	L1	L1FLnI	chr1	146795115	146805699	+	noncoding	HYDIN2	transcribed_unprocessed_pseudogene	SENSE	ENSG00000276975	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:146261741-148712511
L1FLnI_1q21.1g	L1	L1	L1FLnI	chr1	146795115	146805003	+	noncoding	HYDIN2	transcribed_unprocessed_pseudogene	SENSE	ENSG00000276975	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:146261741-148712511
L1FLnI_1q21.1h	L1	L1	L1FLnI	chr1	147003022	147013172	+	coding	AC244394.2	lncRNA	ANTISENSE	ENSG00000234225	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:146261741-148712511
L1FLnI_1q21.1i	L1	L1	L1FLnI	chr1	147060415	147070566	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NBPF13P	ENSG00000227242	3822	RNU1-151P	ENSG00000201142	9180	None	chr1:146261741-148712511
L1FLnI_1q21.1j	L1	L1	L1FLnI	chr1	147321300	147331314	-	coding	LINC00624	lncRNA	SENSE	ENSG00000278811	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:146261741-148712511
L1FLnI_1q21.1k	L1	L1	L1FLnI	chr1	147339499	147349614	+	noncoding	LINC00624	lncRNA	ANTISENSE	ENSG00000278811	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:146261741-148712511
L1FLnI_1q21.1l	L1	L1	L1FLnI	chr1	147398886	147409029	+	coding	LINC00624	lncRNA	ANTISENSE	ENSG00000278811	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:146261741-148712511
L1FLnI_1q21.1m	L1	L1	L1FLnI	chr1	147419720	147429741	+	coding	LINC00624,OR13Z1P,AC242425.1	lncRNA,unitary_pseudogene,misc_RNA	ANTISENSE,SENSE,ANTISENSE	ENSG00000278811,ENSG00000226653,ENSG00000207209	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:146261741-148712511
L1FLnI_1q21.1n	L1	L1	L1FLnI	chr1	147462254	147473423	-	noncoding	LINC00624	lncRNA	SENSE	ENSG00000278811	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:146261741-148712511
L1FLnI_1q21.2a	L1	L1	L1FLnI	chr1	147851077	147860773	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC239801.1	ENSG00000223728	8718	GJA8	ENSG00000121634	47183	None	chr1:146261741-148712511
L1FLnI_1q21.2b	L1	L1	L1FLnI	chr1	147858134	147868262	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC239801.1	ENSG00000223728	15775	GJA8	ENSG00000121634	39694	None	chr1:146261741-148712511
L1FLnI_1q21.2c	L1	L1	L1FLnI	chr1	148829928	148840068	-	coding	PDE4DIP,RN7SKP88	protein_coding,misc_RNA	ANTISENSE,SENSE	ENSG00000178104,ENSG00000252656	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q21.2d	L1	L1	L1FLnI	chr1	149034518	149044638	-	coding	PDE4DIP	protein_coding	ANTISENSE	ENSG00000178104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q21.2e	L1	L1	L1FLnI	chr1	149290177	149300316	+	coding	AC245297.1,AC245297.3	transcribed_unprocessed_pseudogene,misc_RNA	ANTISENSE,SENSE	ENSG00000215861,ENSG00000273591	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q21.2f	L1	L1	L1FLnI	chr1	149951555	149961658	-	coding	OTUD7B	protein_coding	SENSE	ENSG00000264522	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr1:149960036-149960336	None
L1FLnI_1q21.3a	L1	L1	L1FLnI	chr1	152230335	152239343	-	noncoding	FLG-AS1	lncRNA	ANTISENSE	ENSG00000237975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q21.3b	L1	L1	L1FLnI	chr1	152259319	152267907	+	coding	FLG-AS1	lncRNA	SENSE	ENSG00000237975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q21.3c	L1	L1	L1FLnI	chr1	152273652	152284106	+	noncoding	FLG-AS1	lncRNA	SENSE	ENSG00000237975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q21.3d	L1	L1	L1FLnI	chr1	152315903	152324437	+	noncoding	FLG-AS1,FLG	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000237975,ENSG00000143631	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q21.3e	L1	L1	L1FLnI	chr1	152430713	152439408	-	coding	FLG-AS1	lncRNA	ANTISENSE	ENSG00000237975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q21.3f	L1	L1	L1FLnI	chr1	152547284	152557418	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LCE3E	ENSG00000185966	8236	CRCT1	ENSG00000169509	31276	None	None
L1FLnI_1q21.3g	L1	L1	L1FLnI	chr1	152581013	152591233	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LCE3D	ENSG00000163202	497	LCE3C	ENSG00000244057	9429	None	None
L1FLnI_1q21.3h	L1	L1	L1FLnI	chr1	152581013	152590741	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LCE3D	ENSG00000163202	497	LCE3C	ENSG00000244057	9921	None	None
L1FLnI_1q21.3i	L1	L1	L1FLnI	chr1	152826786	152836878	+	coding	LCE1A	protein_coding	SENSE	ENSG00000186844	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q21.3j	L1	L1	L1FLnI	chr1	153182888	153192615	-	coding	AL161636.1	lncRNA	ANTISENSE	ENSG00000229699	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q21.3k	L1	L1	L1FLnI	chr1	153268032	153276708	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PGLYRP3	ENSG00000159527	21154	LOR	ENSG00000203782	5908	None	None
L1FLnI_1q21.3l	L1	L1	L1FLnI	chr1	153313763	153324072	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGLYRP4	ENSG00000163218	6048	PGLYRP3	ENSG00000159527	3045	None	None
L1FLnI_1q21.3m	L1	L1	L1FLnI	chr1	153403498	153413638	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	S100A15A	ENSG00000224784	6727	S100A7A	ENSG00000184330	2882	None	None
L1FLnI_1q23.1a	L1	L1	L1FLnI	chr1	157210802	157220088	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138900.1	ENSG00000228239	12143	AL357143.2	ENSG00000284592	5762	None	None
L1FLnI_1q23.1b	L1	L1	L1FLnI	chr1	157250409	157260560	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL138900.1	ENSG00000228239	13273	LINC02772	ENSG00000271736	13200	None	None
L1FLnI_1q23.1c	L1	L1	L1FLnI	chr1	157290476	157300873	+	noncoding	AL138900.2	unprocessed_pseudogene	ANTISENSE	ENSG00000286073	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q23.1d	L1	L1	L1FLnI	chr1	157339793	157348844	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL732406.1	ENSG00000286151	52083	AL138900.2	ENSG00000286073	29138	None	None
L1FLnI_1q23.1e	L1	L1	L1FLnI	chr1	157339806	157348844	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL732406.1	ENSG00000286151	52083	AL138900.2	ENSG00000286073	29151	None	None
L1FLnI_1q23.1f	L1	L1	L1FLnI	chr1	157783398	157792161	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FCRL2	ENSG00000132704	6266	FCRL1	ENSG00000163534	2242	chr1:157792118-157792251	None
L1FLnI_1q23.1g	L1	L1	L1FLnI	chr1	157807668	157819067	+	noncoding	FCRL1	protein_coding	ANTISENSE	ENSG00000163534	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:157809384-157809395
L1FLnI_1q23.1h	L1	L1	L1FLnI	chr1	157807668	157817284	+	noncoding	FCRL1	protein_coding	ANTISENSE	ENSG00000163534	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:157809384-157809395
L1FLnI_1q23.1i	L1	L1	L1FLnI	chr1	157898380	157908487	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CD5L	ENSG00000073754	124	AL139010.1	ENSG00000236957	16578	None	None
L1FLnI_1q23.1j	L1	L1	L1FLnI	chr1	158215301	158225447	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CD1A	ENSG00000158477	28977	AL138899.1	ENSG00000176320	11424	None	None
L1FLnI_1q23.1k	L1	L1	L1FLnI	chr1	158233771	158243161	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL138899.1	ENSG00000176320	29894	CD1A	ENSG00000158477	11263	None	None
L1FLnI_1q23.1l	L1	L1	L1FLnI	chr1	158300456	158310494	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CD1C	ENSG00000158481	5682	CD1B	ENSG00000158485	17457	None	None
L1FLnI_1q23.1m	L1	L1	L1FLnI	chr1	158314161	158324185	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CD1B	ENSG00000158485	3766	CD1C	ENSG00000158481	19387	None	None
L1FLnI_1q23.1n	L1	L1	L1FLnI	chr1	158332599	158342736	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CD1B	ENSG00000158485	1068	CD1E	ENSG00000158488	10960	chr1:158333887-158334071	chr1:158333888-158333930
L1FLnI_1q23.1o	L1	L1	L1FLnI	chr1	158426522	158437009	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR10T1P	ENSG00000203758	8059	OR10K2	ENSG00000180708	285	None	None
L1FLnI_1q23.1p	L1	L1	L1FLnI	chr1	158833939	158842731	-	noncoding	MNDA	protein_coding	ANTISENSE	ENSG00000163563	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chr1:158838472-158838748	chr1:158842129-158842147,chr1:158842181-158842209,chr1:158842306-158842332
L1FLnI_1q23.1q	L1	L1	L1FLnI	chr1	158882605	158892628	+	coding	PYHIN5P	unprocessed_pseudogene	SENSE	ENSG00000229849	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q23.1r	L1	L1	L1FLnI	chr1	158882605	158892614	+	coding	PYHIN5P	unprocessed_pseudogene	SENSE	ENSG00000229849	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q23.1s	L1	L1	L1FLnI	chr1	158949242	158959269	+	coding	PYHIN1	protein_coding	SENSE	ENSG00000163564	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:158952125-158952132
L1FLnI_1q23.1t	L1	L1	L1FLnI	chr1	158957915	158969563	+	noncoding	PYHIN1	protein_coding	SENSE	ENSG00000163564	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:158965724-158965760
L1FLnI_1q23.1u	L1	L1	L1FLnI	chr1	158981244	158990454	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IFI16	ENSG00000163565	9514	PYHIN1	ENSG00000163564	4185	None	None
L1FLnI_1q23.2a	L1	L1	L1FLnI	chr1	159265814	159275225	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CADM3-AS1	ENSG00000225670	57841	MPTX1	ENSG00000215846	1278	None	None
L1FLnI_1q23.2b	L1	L1	L1FLnI	chr1	159320138	159328950	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR10J3	ENSG00000196266	5479	AL513323.1	ENSG00000228560	17216	None	None
L1FLnI_1q23.2c	L1	L1	L1FLnI	chr1	159449455	159459476	+	coding	AL513323.1	lncRNA	ANTISENSE	ENSG00000228560	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q23.2d	L1	L1	L1FLnI	chr1	159534721	159544748	+	coding	OR10J5	protein_coding	ANTISENSE	ENSG00000184155	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q23.2e	L1	L1	L1FLnI	chr1	159568455	159578604	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR10AE1P	ENSG00000271890	3016	AL606752.1	ENSG00000231100	10255	None	None
L1FLnI_1q23.2f	L1	L1	L1FLnI	chr1	159600264	159610402	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR10J6P	ENSG00000158731	1037	AL445528.2	ENSG00000276632	38749	None	None
L1FLnI_1q23.2g	L1	L1	L1FLnI	chr1	159612581	159623073	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR10J6P	ENSG00000158731	13354	AL445528.2	ENSG00000276632	26078	None	chr1:159613082-159613091
L1FLnI_1q23.2h	L1	L1	L1FLnI	chr1	159726956	159737075	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CRP	ENSG00000132693	12367	AL445528.1	ENSG00000235226	22095	None	None
L1FLnI_1q23.2i	L1	L1	L1FLnI	chr1	160474805	160484951	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLAMF6	ENSG00000162739	79	VANGL2	ENSG00000162738	46135	None	chr1:160484273-160484277
L1FLnI_1q23.3a	L1	L1	L1FLnI	chr1	160508206	160518527	+	noncoding	SLAMF6	protein_coding	ANTISENSE	ENSG00000162739	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q23.3b	L1	L1	L1FLnI	chr1	160554270	160564265	+	noncoding	AL138930.1,CD84	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000234425,ENSG00000066294	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:160560333-160560621,chr1:160560947-160561073	None
L1FLnI_1q23.3c	L1	L1	L1FLnI	chr1	160779582	160788885	+	coding	AL121985.2	unprocessed_pseudogene	ANTISENSE	ENSG00000274562	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q23.3d	L1	L1	L1FLnI	chr1	160803521	160812320	-	noncoding	LY9	protein_coding	ANTISENSE	ENSG00000122224	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q23.3e	L1	L1	L1FLnI	chr1	160936461	160945537	-	noncoding	AL354714.1,ITLN2	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000198358,ENSG00000158764	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q23.3f	L1	L1	L1FLnI	chr1	161689360	161699812	+	noncoding	AL359541.1	misc_RNA	SENSE	ENSG00000199595	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q23.3g	L1	L1	L1FLnI	chr1	162100217	162109922	-	coding	NOS1AP	protein_coding	ANTISENSE	ENSG00000198929	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q23.3h	L1	L1	L1FLnI	chr1	162742505	162752653	+	coding	DDR2	protein_coding	SENSE	ENSG00000162733	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q23.3i	L1	L1	L1FLnI	chr1	163639500	163649540	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL355862.1	ENSG00000228289	119799	RNA5SP63	ENSG00000212527	129905	None	None
L1FLnI_1q23.3j	L1	L1	L1FLnI	chr1	163639520	163649540	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL355862.1	ENSG00000228289	119799	RNA5SP63	ENSG00000212527	129925	None	None
L1FLnI_1q23.3k	L1	L1	L1FLnI	chr1	163738951	163749576	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355862.1	ENSG00000228289	19763	RNA5SP63	ENSG00000212527	229356	None	None
L1FLnI_1q23.3l	L1	L1	L1FLnI	chr1	163749742	163759758	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL355862.1	ENSG00000228289	9581	RNA5SP63	ENSG00000212527	240147	None	None
L1FLnI_1q23.3m	L1	L1	L1FLnI	chr1	163847926	163858046	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL358875.1	ENSG00000212538	65624	AL355862.1	ENSG00000228289	78235	None	None
L1FLnI_1q23.3n	L1	L1	L1FLnI	chr1	163958385	163967927	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358875.1	ENSG00000212538	34512	NMNAT1P2	ENSG00000225719	375078	None	None
L1FLnI_1q23.3o	L1	L1	L1FLnI	chr1	164067611	164077209	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NMNAT1P2	ENSG00000225719	265796	AL358875.1	ENSG00000212538	143738	None	None
L1FLnI_1q23.3p	L1	L1	L1FLnI	chr1	164067611	164076756	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NMNAT1P2	ENSG00000225719	266249	AL358875.1	ENSG00000212538	143738	None	None
L1FLnI_1q23.3q	L1	L1	L1FLnI	chr1	164121132	164130572	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NMNAT1P2	ENSG00000225719	212433	AL358875.1	ENSG00000212538	197259	None	None
L1FLnI_1q23.3r	L1	L1	L1FLnI	chr1	164163062	164172586	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL358875.1	ENSG00000212538	239189	NMNAT1P2	ENSG00000225719	170419	None	None
L1FLnI_1q23.3s	L1	L1	L1FLnI	chr1	164212523	164222685	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL358875.1	ENSG00000212538	288650	NMNAT1P2	ENSG00000225719	120320	None	None
L1FLnI_1q23.3t	L1	L1	L1FLnI	chr1	164343622	164352243	+	noncoding	NMNAT1P2,RNU5F-6P	processed_pseudogene,snRNA	SENSE,SENSE	ENSG00000225719,ENSG00000199849	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q23.3u	L1	L1	L1FLnI	chr1	164348490	164357094	+	noncoding	RNU5F-6P,HMGB3P6	snRNA,processed_pseudogene	SENSE,SENSE	ENSG00000199849,ENSG00000213070	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:164356664-164356669,chr1:164356740-164356744
L1FLnI_1q23.3v	L1	L1	L1FLnI	chr1	164455705	164465753	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P6	ENSG00000213070	98341	PBX1	ENSG00000185630	89831	None	None
L1FLnI_1q23.3w	L1	L1	L1FLnI	chr1	165081467	165091610	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-755P	ENSG00000201270	101330	LMX1A	ENSG00000162761	110257	None	None
L1FLnI_1q23.3x	L1	L1	L1FLnI	chr1	165102741	165111933	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LMX1A	ENSG00000162761	89934	RNU6-755P	ENSG00000201270	122604	None	None
L1FLnI_1q24.1a	L1	L1	L1FLnI	chr1	165777571	165787653	-	coding	TMCO1	protein_coding	SENSE	ENSG00000143183	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q24.1b	L1	L1	L1FLnI	chr1	166096706	166106864	+	noncoding	FAM78B	protein_coding	ANTISENSE	ENSG00000188859	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q24.1c	L1	L1	L1FLnI	chr1	166227111	166236792	-	noncoding	AL596087.2	lncRNA	ANTISENSE	ENSG00000229588	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q24.1d	L1	L1	L1FLnI	chr1	166242555	166252584	-	coding	AL596087.2	lncRNA	ANTISENSE	ENSG00000229588	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q24.1e	L1	L1	L1FLnI	chr1	166310371	166320527	-	coding	AL596087.2	lncRNA	ANTISENSE	ENSG00000229588	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q24.1f	L1	L1	L1FLnI	chr1	166310380	166320527	-	coding	AL596087.2	lncRNA	ANTISENSE	ENSG00000229588	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q24.1g	L1	L1	L1FLnI	chr1	166410801	166420938	-	noncoding	AL583804.1	lncRNA	SENSE	ENSG00000225325	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q24.1h	L1	L1	L1FLnI	chr1	166422971	166433412	-	noncoding	AL583804.1	lncRNA	SENSE	ENSG00000225325	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q24.1i	L1	L1	L1FLnI	chr1	166726916	166735808	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FMO10P	ENSG00000234984	44720	RPL4P2	ENSG00000232341	11571	None	None
L1FLnI_1q24.2a	L1	L1	L1FLnI	chr1	168348364	168358379	-	coding	AL022100.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000227722	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q24.2b	L1	L1	L1FLnI	chr1	168677771	168688123	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DPT	ENSG00000143196	7345	XCL1	ENSG00000143184	95702	None	None
L1FLnI_1q24.2c	L1	L1	L1FLnI	chr1	168992145	169002531	-	noncoding	AL135926.1,LINC00970	lncRNA,lncRNA	SENSE,SENSE	ENSG00000285622,ENSG00000203601	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:168992282-168992332	None
L1FLnI_1q24.2d	L1	L1	L1FLnI	chr1	169032460	169042826	+	noncoding	AL135926.1,LINC00970	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000285622,ENSG00000203601	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q24.2e	L1	L1	L1FLnI	chr1	169251063	169261091	-	coding	NME7	protein_coding	SENSE	ENSG00000143156	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q24.2f	L1	L1	L1FLnI	chr1	169279339	169287862	-	coding	NME7	protein_coding	SENSE	ENSG00000143156	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q24.2g	L1	L1	L1FLnI	chr1	169397199	169407297	+	noncoding	CCDC181	protein_coding	ANTISENSE	ENSG00000117477	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q24.2h	L1	L1	L1FLnI	chr1	169404130	169414527	+	noncoding	CCDC181	protein_coding	ANTISENSE	ENSG00000117477	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q24.2i	L1	L1	L1FLnI	chr1	169652463	169661533	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SELP	ENSG00000174175	22270	C1orf112	ENSG00000000460	474	None	None
L1FLnI_1q24.2j	L1	L1	L1FLnI	chr1	170045039	170055484	+	noncoding	KIFAP3	protein_coding	ANTISENSE	ENSG00000075945	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:170046208-170046209
L1FLnI_1q24.2k	L1	L1	L1FLnI	chr1	170045039	170054037	+	noncoding	KIFAP3	protein_coding	ANTISENSE	ENSG00000075945	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:170046208-170046209
L1FLnI_1q24.2l	L1	L1	L1FLnI	chr1	170088673	170098701	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SIGLEC30P	ENSG00000224896	16935	KIFAP3	ENSG00000075945	3465	None	None
L1FLnI_1q24.2m	L1	L1	L1FLnI	chr1	170106979	170115841	-	coding	SIGLEC30P	processed_pseudogene	ANTISENSE	ENSG00000224896	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q24.2n	L1	L1	L1FLnI	chr1	170187516	170196075	-	noncoding	LINC01681	lncRNA	ANTISENSE	ENSG00000233985	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q24.2o	L1	L1	L1FLnI	chr1	170360672	170369226	-	coding	HAUS4P1	processed_pseudogene	SENSE	ENSG00000226967	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q24.2p	L1	L1	L1FLnI	chr1	170378426	170390024	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GORAB-AS1	ENSG00000231407	70429	HAUS4P1	ENSG00000226967	8059	None	None
L1FLnI_1q24.2q	L1	L1	L1FLnI	chr1	170422670	170433085	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HAUS4P1	ENSG00000226967	52303	GORAB-AS1	ENSG00000231407	27368	None	None
L1FLnI_1q24.2r	L1	L1	L1FLnI	chr1	170460387	170470537	+	noncoding	GORAB-AS1	lncRNA	ANTISENSE	ENSG00000231407	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q24.2s	L1	L1	L1FLnI	chr1	170565381	170575870	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GORAB	ENSG00000120370	11935	AL162399.1	ENSG00000225545	11379	None	None
L1FLnI_1q24.2t	L1	L1	L1FLnI	chr1	170807250	170817390	+	coding	BX284613.2	lncRNA	ANTISENSE	ENSG00000231424	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q24.3a	L1	L1	L1FLnI	chr1	171233639	171243925	+	noncoding	BX284613.2	lncRNA	ANTISENSE	ENSG00000231424	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q24.3b	L1	L1	L1FLnI	chr1	171355723	171365103	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SRP14P4	ENSG00000268062	10416	GM2AP2	ENSG00000239428	27126	None	None
L1FLnI_1q24.3c	L1	L1	L1FLnI	chr1	171370088	171380076	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SRP14P4	ENSG00000268062	24781	GM2AP2	ENSG00000239428	12153	None	None
L1FLnI_1q24.3d	L1	L1	L1FLnI	chr1	171370088	171380097	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SRP14P4	ENSG00000268062	24781	GM2AP2	ENSG00000239428	12132	None	None
L1FLnI_1q24.3e	L1	L1	L1FLnI	chr1	171549970	171560057	-	coding	PRRC2C	protein_coding	ANTISENSE	ENSG00000117523	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:171550004-171550008,chr1:171557384-171557446,chr1:171557574-171557689,chr1:171557845-171557930,chr1:171557840-171557857,chr1:171550082-171550103
L1FLnI_1q24.3f	L1	L1	L1FLnI	chr1	172052331	172062361	+	coding	DNM3	protein_coding	SENSE	ENSG00000197959	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q24.3g	L1	L1	L1FLnI	chr1	172195409	172205465	-	noncoding	DNM3	protein_coding	ANTISENSE	ENSG00000197959	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q24.3h	L1	L1	L1FLnI	chr1	172298410	172308531	+	coding	DNM3	protein_coding	SENSE	ENSG00000197959	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:172301121-172301132
L1FLnI_1q24.3i	L1	L1	L1FLnI	chr1	172310748	172320895	+	coding	DNM3	protein_coding	SENSE	ENSG00000197959	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q24.3j	L1	L1	L1FLnI	chr1	172428117	172438244	+	noncoding	PIGC,C1orf105	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000135845,ENSG00000180999	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr1:172428561-172428590
L1FLnI_1q24.3k	L1	L1	L1FLnI	chr1	172428117	172438228	+	noncoding	PIGC,C1orf105	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000135845,ENSG00000180999	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr1:172428561-172428590
L1FLnI_1q24.3l	L1	L1	L1FLnI	chr1	172590776	172600914	-	coding	SUCO	protein_coding	ANTISENSE	ENSG00000094975	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q24.3m	L1	L1	L1FLnI	chr1	172980781	172990806	-	coding	AL031599.1	lncRNA	ANTISENSE	ENSG00000224228	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:172990719-172990971	None
L1FLnI_1q25.1a	L1	L1	L1FLnI	chr1	173068608	173077137	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GOT2P2	ENSG00000230849	63963	AL031599.1	ENSG00000224228	4593	None	None
L1FLnI_1q25.1b	L1	L1	L1FLnI	chr1	173150246	173160405	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GOT2P2	ENSG00000230849	7896	AL022310.1	ENSG00000226375	13895	None	None
L1FLnI_1q25.1c	L1	L1	L1FLnI	chr1	173318903	173329014	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TNFSF4	ENSG00000117586	111572	AL645568.3	ENSG00000232751	22675	None	None
L1FLnI_1q25.1d	L1	L1	L1FLnI	chr1	173510831	173519689	-	noncoding	SLC9C2	protein_coding	SENSE	ENSG00000162753	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.1e	L1	L1	L1FLnI	chr1	173649610	173659742	-	coding	AL139142.2,ANKRD45	protein_coding,protein_coding	SENSE,SENSE	ENSG00000285777,ENSG00000183831	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:173657644-173657647
L1FLnI_1q25.1f	L1	L1	L1FLnI	chr1	173693307	173702325	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ANKRD45	ENSG00000183831	23456	KLHL20	ENSG00000076321	12616	None	None
L1FLnI_1q25.1g	L1	L1	L1FLnI	chr1	173722266	173732372	+	coding	KLHL20	protein_coding	SENSE	ENSG00000076321	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.1h	L1	L1	L1FLnI	chr1	173754862	173765356	+	noncoding	KLHL20	protein_coding	SENSE	ENSG00000076321	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:173758398-173758405
L1FLnI_1q25.1i	L1	L1	L1FLnI	chr1	173808196	173817357	+	coding	CENPL,AL109921.1	protein_coding,misc_RNA	ANTISENSE,SENSE	ENSG00000120334,ENSG00000252357	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.1j	L1	L1	L1FLnI	chr1	174124996	174135399	-	noncoding	RABGAP1L-DT	lncRNA	SENSE	ENSG00000227373	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.1k	L1	L1	L1FLnI	chr1	174232768	174242793	-	coding	RABGAP1L	protein_coding	ANTISENSE	ENSG00000152061	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_1q25.1a	L1	L1	L1FLI	chr1	174376772	174384818	-	coding	RABGAP1L	protein_coding	ANTISENSE	ENSG00000152061	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_1q25.1b	L1	L1	L1FLI	chr1	174589337	174597381	-	coding	RABGAP1L	protein_coding	ANTISENSE	ENSG00000152061	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.1l	L1	L1	L1FLnI	chr1	174609559	174619728	-	coding	RABGAP1L	protein_coding	ANTISENSE	ENSG00000152061	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.1m	L1	L1	L1FLnI	chr1	174842728	174852743	-	coding	RABGAP1L,NDUFAF4P4	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000152061,ENSG00000231378	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:174849250-174849254
L1FLnI_1q25.1n	L1	L1	L1FLnI	chr1	175230572	175240773	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL008626.1	ENSG00000230687	25723	RPS29P4	ENSG00000233946	56307	None	None
L1FLnI_1q25.1o	L1	L1	L1FLnI	chr1	175988758	175998971	+	coding	COP1	protein_coding	ANTISENSE	ENSG00000143207	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.1p	L1	L1	L1FLnI	chr1	175988758	175999001	+	coding	COP1	protein_coding	ANTISENSE	ENSG00000143207	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.1q	L1	L1	L1FLnI	chr1	176001856	176011867	-	coding	COP1	protein_coding	SENSE	ENSG00000143207	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.2a	L1	L1	L1FLnI	chr1	176255587	176265610	-	coding	AL591043.2	lncRNA	ANTISENSE	ENSG00000236021	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.2b	L1	L1	L1FLnI	chr1	176281710	176290863	-	noncoding	AL591043.2	lncRNA	ANTISENSE	ENSG00000236021	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.2c	L1	L1	L1FLnI	chr1	176307884	176317888	-	noncoding	AL591043.2	lncRNA	ANTISENSE	ENSG00000236021	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.2d	L1	L1	L1FLnI	chr1	176307897	176317888	-	noncoding	AL591043.2	lncRNA	ANTISENSE	ENSG00000236021	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.2e	L1	L1	L1FLnI	chr1	176352945	176362486	+	coding	AL591043.2	lncRNA	SENSE	ENSG00000236021	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.2f	L1	L1	L1FLnI	chr1	176397248	176406004	-	noncoding	AL591043.2	lncRNA	ANTISENSE	ENSG00000236021	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.2g	L1	L1	L1FLnI	chr1	176419349	176430610	-	noncoding	AL591043.2	lncRNA	ANTISENSE	ENSG00000236021	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.2h	L1	L1	L1FLnI	chr1	177378406	177388763	-	noncoding	LINC01645	lncRNA	ANTISENSE	ENSG00000224968	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.2i	L1	L1	L1FLnI	chr1	177400419	177410441	-	coding	LINC01645,AL136114.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000224968,ENSG00000227579	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.2j	L1	L1	L1FLnI	chr1	177630429	177640446	+	coding	AL136114.1	lncRNA	ANTISENSE	ENSG00000227579	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.2k	L1	L1	L1FLnI	chr1	177671312	177681446	-	coding	AL136114.1	lncRNA	SENSE	ENSG00000227579	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.2l	L1	L1	L1FLnI	chr1	177689031	177699161	+	coding	AL136114.1	lncRNA	ANTISENSE	ENSG00000227579	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.2m	L1	L1	L1FLnI	chr1	177755905	177766045	+	coding	AL136114.1	lncRNA	ANTISENSE	ENSG00000227579	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.2n	L1	L1	L1FLnI	chr1	177982529	177992695	+	coding	SEC16B,CRYZL2P-SEC16B	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000120341,ENSG00000254154	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:177984259-177984289
L1FLnI_1q25.2o	L1	L1	L1FLnI	chr1	178244060	178254199	-	noncoding	RASAL2	protein_coding	ANTISENSE	ENSG00000075391	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:178253582-178253593
L1ORF2_1q25.2	L1	L1	L1ORF2	chr1	178313776	178321821	-	coding	RASAL2	protein_coding	ANTISENSE	ENSG00000075391	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.2p	L1	L1	L1FLnI	chr1	178834049	178844166	+	coding	RALGPS2	protein_coding	SENSE	ENSG00000116191	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.2q	L1	L1	L1FLnI	chr1	178987093	178997073	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	FAM20B	ENSG00000116199	28731	RALGPS2	ENSG00000116191	65252	None	None
L1FLnI_1q25.2r	L1	L1	L1FLnI	chr1	179459545	179469749	-	coding	AXDND1	protein_coding	ANTISENSE	ENSG00000162779	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.2s	L1	L1	L1FLnI	chr1	179534725	179544961	-	coding	AXDND1,AL160286.3	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000162779,ENSG00000261250	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.2t	L1	L1	L1FLnI	chr1	179565074	179573683	-	noncoding	NPHS2	protein_coding	SENSE	ENSG00000116218	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.2u	L1	L1	L1FLnI	chr1	179683554	179693695	-	coding	TDRD5	protein_coding	ANTISENSE	ENSG00000162782	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.2v	L1	L1	L1FLnI	chr1	179690555	179700929	+	coding	TDRD5	protein_coding	SENSE	ENSG00000162782	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.3a	L1	L1	L1FLnI	chr1	180330073	180340194	+	coding	ACBD6	protein_coding	ANTISENSE	ENSG00000230124	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_1q25.3	L1	L1	L1FLI	chr1	180865799	180873845	-	coding	XPR1	protein_coding	ANTISENSE	ENSG00000143324	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.3b	L1	L1	L1FLnI	chr1	181272364	181282492	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01699	ENSG00000179452	33760	CACNA1E	ENSG00000198216	35198	None	None
L1FLnI_1q25.3c	L1	L1	L1FLnI	chr1	181845331	181855705	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP229	ENSG00000222397	5557	AL391477.1	ENSG00000287452	107184	None	None
L1FLnI_1q25.3d	L1	L1	L1FLnI	chr1	181868392	181878936	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP229	ENSG00000222397	28618	AL391477.1	ENSG00000287452	83953	None	None
L1FLnI_1q25.3e	L1	L1	L1FLnI	chr1	181955619	181965858	-	noncoding	AL391477.1	lncRNA	SENSE	ENSG00000287452	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.3f	L1	L1	L1FLnI	chr1	182540460	182549633	-	noncoding	RGSL1	protein_coding	ANTISENSE	ENSG00000121446	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.3g	L1	L1	L1FLnI	chr1	183393803	183402579	+	coding	NMNAT2	protein_coding	ANTISENSE	ENSG00000157064	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.3h	L1	L1	L1FLnI	chr1	183654569	183664723	+	coding	RGL1	protein_coding	SENSE	ENSG00000143344	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.3i	L1	L1	L1FLnI	chr1	183678743	183687917	-	coding	RGL1	protein_coding	ANTISENSE	ENSG00000143344	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.3j	L1	L1	L1FLnI	chr1	184130075	184140257	-	coding	AL158011.2	lncRNA	SENSE	ENSG00000286655	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.3k	L1	L1	L1FLnI	chr1	184303045	184312347	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445228.1	ENSG00000207080	3311	AL158011.1	ENSG00000199840	131222	None	None
L1FLnI_1q25.3l	L1	L1	L1FLnI	chr1	184842118	184852141	+	coding	NIBAN1	protein_coding	ANTISENSE	ENSG00000135842	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:184843735-184844046	None
L1FLnI_1q25.3m	L1	L1	L1FLnI	chr1	184998032	185008055	+	coding	LINC01633	lncRNA	SENSE	ENSG00000260976	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.3n	L1	L1	L1FLnI	chr1	185251300	185261305	-	coding	SWT1,AL356273.1,AL356273.2	protein_coding,misc_RNA,misc_RNA	ANTISENSE,ANTISENSE,SENSE	ENSG00000116668,ENSG00000201421,ENSG00000206640	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.3o	L1	L1	L1FLnI	chr1	185378104	185388239	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-183P	ENSG00000252407	46005	AL078644.1	ENSG00000261024	43065	None	None
L1FLnI_1q25.3p	L1	L1	L1FLnI	chr1	185582906	185592991	+	coding	LINC01350	lncRNA	ANTISENSE	ENSG00000228309	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q25.3q	L1	L1	L1FLnI	chr1	185635839	185644566	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL133383.1	ENSG00000201596	1657	AL133383.3	ENSG00000261729	1897	None	None
L1FLnI_1q25.3r	L1	L1	L1FLnI	chr1	185703899	185714077	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL133383.3	ENSG00000261729	46731	HMCN1	ENSG00000143341	20314	None	None
L1FLnI_1q25.3s	L1	L1	L1FLnI	chr1	185777848	185788001	-	coding	HMCN1	protein_coding	ANTISENSE	ENSG00000143341	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.1a	L1	L1	L1FLnI	chr1	185886795	185896834	-	coding	HMCN1	protein_coding	ANTISENSE	ENSG00000143341	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.1b	L1	L1	L1FLnI	chr1	185886808	185896834	-	coding	HMCN1	protein_coding	ANTISENSE	ENSG00000143341	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.1c	L1	L1	L1FLnI	chr1	186156991	186167060	-	noncoding	HMCN1	protein_coding	ANTISENSE	ENSG00000143341	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.1d	L1	L1	L1FLnI	chr1	186256102	186266229	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PRG4	ENSG00000116690	30050	AL133553.2	ENSG00000288078	27911	None	None
L1FLnI_1q31.1e	L1	L1	L1FLnI	chr1	186505913	186516171	-	noncoding	AL096803.2	lncRNA	ANTISENSE	ENSG00000229739	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.1f	L1	L1	L1FLnI	chr1	186527400	186536162	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL096803.1	ENSG00000228238	42117	AL096803.4	ENSG00000273198	5096	None	None
L1FLnI_1q31.1g	L1	L1	L1FLnI	chr1	186544800	186554940	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL096803.1	ENSG00000228238	23339	AL096803.4	ENSG00000273198	22496	None	None
L1FLnI_1q31.1h	L1	L1	L1FLnI	chr1	186633833	186643856	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL049198.1	ENSG00000288562	7214	PTGS2	ENSG00000073756	27935	chr1:186643741-186643916	None
L1FLnI_1q31.1i	L1	L1	L1FLnI	chr1	187217154	187228661	-	coding	ERVMER61-1	lncRNA	ANTISENSE	ENSG00000230426	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.1j	L1	L1	L1FLnI	chr1	187217154	187225905	-	coding	ERVMER61-1	lncRNA	ANTISENSE	ENSG00000230426	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_1q31.1a	L1	L1	L1FLI	chr1	187342752	187350797	-	coding	ERVMER61-1	lncRNA	ANTISENSE	ENSG00000230426	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.1k	L1	L1	L1FLnI	chr1	187555841	187564617	-	coding	ERVMER61-1,FDPSP1	lncRNA,processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000230426,ENSG00000225462	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_1q31.1b	L1	L1	L1FLI	chr1	187596668	187604713	+	coding	ERVMER61-1	lncRNA	SENSE	ENSG00000230426	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.1l	L1	L1	L1FLnI	chr1	187803449	187811999	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL136372.2	ENSG00000285894	201643	AL645474.1	ENSG00000223847	88714	None	None
L1FLnI_1q31.1m	L1	L1	L1FLnI	chr1	188067110	188075991	-	noncoding	AL136372.2,AL136372.1	lncRNA,processed_pseudogene	ANTISENSE,SENSE	ENSG00000285894,ENSG00000150732	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.1n	L1	L1	L1FLnI	chr1	188697391	188706217	-	noncoding	AL691515.1	lncRNA	SENSE	ENSG00000237283	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.1o	L1	L1	L1FLnI	chr1	188751718	188761760	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL691515.2	ENSG00000238054	107714	AL691515.1	ENSG00000237283	19510	None	None
L1FLnI_1q31.1p	L1	L1	L1FLnI	chr1	188751742	188761760	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL691515.2	ENSG00000238054	107714	AL691515.1	ENSG00000237283	19534	None	None
L1FLnI_1q31.1q	L1	L1	L1FLnI	chr1	188765401	188775496	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL691515.1	ENSG00000237283	33193	AL691515.2	ENSG00000238054	93978	None	None
L1FLnI_1q31.1r	L1	L1	L1FLnI	chr1	188766601	188775496	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL691515.1	ENSG00000237283	34393	AL691515.2	ENSG00000238054	93978	None	None
L1FLnI_1q31.1s	L1	L1	L1FLnI	chr1	189231452	189240850	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP73	ENSG00000252553	425299	GAPDHP75	ENSG00000226196	98160	None	None
L1FLnI_1q31.1t	L1	L1	L1FLnI	chr1	189324786	189334928	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP73	ENSG00000252553	331221	GAPDHP75	ENSG00000226196	191494	None	None
L1FLnI_1q31.1u	L1	L1	L1FLnI	chr1	189410140	189420159	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP73	ENSG00000252553	245990	GAPDHP75	ENSG00000226196	276848	None	None
L1FLnI_1q31.1v	L1	L1	L1FLnI	chr1	189468238	189478268	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP73	ENSG00000252553	187881	GAPDHP75	ENSG00000226196	334946	None	None
L1FLnI_1q31.1w	L1	L1	L1FLnI	chr1	189509172	189519557	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP75	ENSG00000226196	375880	RNA5SP73	ENSG00000252553	146592	None	chr1:189512001-189512004
L1FLnI_1q31.1x	L1	L1	L1FLnI	chr1	189704713	189714994	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP73	ENSG00000252553	38457	LINC01701	ENSG00000232212	60471	chr1:189712952-189713105	None
L1FLnI_1q31.1y	L1	L1	L1FLnI	chr1	189751303	189761451	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP73	ENSG00000252553	85047	LINC01701	ENSG00000232212	14014	None	None
L1FLnI_1q31.1z	L1	L1	L1FLnI	chr1	190252294	190261847	-	noncoding	BRINP3	protein_coding	SENSE	ENSG00000162670	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.1aa	L1	L1	L1FLnI	chr1	190252301	190261847	-	noncoding	BRINP3	protein_coding	SENSE	ENSG00000162670	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.1ba	L1	L1	L1FLnI	chr1	190628108	190639313	-	noncoding	LINC01720	lncRNA	ANTISENSE	ENSG00000231175	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.1ca	L1	L1	L1FLnI	chr1	190630458	190639313	-	noncoding	LINC01720	lncRNA	ANTISENSE	ENSG00000231175	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.2a	L1	L1	L1FLnI	chr1	190805465	190814589	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01720	ENSG00000231175	3807	AL138927.1	ENSG00000285638	63556	None	None
L1FLnI_1q31.2b	L1	L1	L1FLnI	chr1	191056793	191065821	-	noncoding	AL138927.1	lncRNA	SENSE	ENSG00000285638	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.2c	L1	L1	L1FLnI	chr1	191123456	191132733	+	noncoding	AL138927.1	lncRNA	ANTISENSE	ENSG00000285638	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.2d	L1	L1	L1FLnI	chr1	191123471	191132733	+	noncoding	AL138927.1	lncRNA	ANTISENSE	ENSG00000285638	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.2e	L1	L1	L1FLnI	chr1	191249233	191259002	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02770	ENSG00000228215	564430	LINC01680	ENSG00000233882	20766	None	None
L1FLnI_1q31.2f	L1	L1	L1FLnI	chr1	191372967	191382440	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02770	ENSG00000228215	440992	LINC01680	ENSG00000233882	144500	None	None
L1FLnI_1q31.2g	L1	L1	L1FLnI	chr1	191442312	191452389	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02770	ENSG00000228215	371043	LINC01680	ENSG00000233882	213845	None	None
L1FLnI_1q31.2h	L1	L1	L1FLnI	chr1	191579873	191589146	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02770	ENSG00000228215	234286	LINC01680	ENSG00000233882	351406	None	None
L1FLnI_1q31.2i	L1	L1	L1FLnI	chr1	191856399	191865570	+	noncoding	LINC02770,AL359081.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000228215,ENSG00000223344	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.2j	L1	L1	L1FLnI	chr1	192497086	192507112	+	coding	AL390957.1	lncRNA	ANTISENSE	ENSG00000285280	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:192500277-192500628	None
L1FLnI_1q31.2k	L1	L1	L1FLnI	chr1	192662467	192672594	-	noncoding	AL390957.1	lncRNA	SENSE	ENSG00000285280	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.2l	L1	L1	L1FLnI	chr1	192682456	192692343	-	noncoding	AL390957.1	lncRNA	SENSE	ENSG00000285280	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.2m	L1	L1	L1FLnI	chr1	193270339	193279848	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01031	ENSG00000232077	24897	CDC73	ENSG00000134371	15524	None	None
L1FLnI_1q31.2n	L1	L1	L1FLnI	chr1	193638916	193648936	-	noncoding	AL136456.1	lncRNA	ANTISENSE	ENSG00000227240	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.2o	L1	L1	L1FLnI	chr1	193717339	193727392	-	coding	AL136456.1,AL357793.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000227240,ENSG00000226640	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.2p	L1	L1	L1FLnI	chr1	193717368	193727392	-	coding	AL136456.1,AL357793.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000227240,ENSG00000226640	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.3a	L1	L1	L1FLnI	chr1	193868471	193877511	+	coding	AL136456.1	lncRNA	SENSE	ENSG00000227240	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.3b	L1	L1	L1FLnI	chr1	194656268	194665545	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-983P	ENSG00000251813	168063	AL353072.1	ENSG00000228167	53250	None	None
L1FLnI_1q31.3c	L1	L1	L1FLnI	chr1	195319531	195328439	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353709.1	ENSG00000287364	418585	AL353072.2	ENSG00000285718	388221	None	None
L1FLnI_1q31.3d	L1	L1	L1FLnI	chr1	195441242	195450901	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353072.2	ENSG00000285718	509932	AL353709.1	ENSG00000287364	296123	None	None
L1FLnI_1q31.3e	L1	L1	L1FLnI	chr1	195581279	195591749	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353072.2	ENSG00000285718	649969	AL353709.1	ENSG00000287364	155275	None	None
L1ORF2_1q31.3	L1	L1	L1ORF2	chr1	195923978	195932027	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01724	ENSG00000227421	112856	AL353709.1	ENSG00000287364	160477	None	None
L1FLnI_1q31.3f	L1	L1	L1FLnI	chr1	196218872	196228902	-	coding	KCNT2	protein_coding	SENSE	ENSG00000162687	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.3g	L1	L1	L1FLnI	chr1	196548893	196557790	+	noncoding	KCNT2	protein_coding	ANTISENSE	ENSG00000162687	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.3h	L1	L1	L1FLnI	chr1	196728838	196737575	-	noncoding	CFH	protein_coding	ANTISENSE	ENSG00000000971	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.3i	L1	L1	L1FLnI	chr1	196780305	196790455	-	coding	CFHR3	protein_coding	ANTISENSE	ENSG00000116785	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.3j	L1	L1	L1FLnI	chr1	196935464	196945599	-	coding	CFHR2	protein_coding	ANTISENSE	ENSG00000080910	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.3k	L1	L1	L1FLnI	chr1	196985865	196996157	-	coding	CFHR5	protein_coding	ANTISENSE	ENSG00000134389	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.3l	L1	L1	L1FLnI	chr1	197239724	197248563	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CRB1	ENSG00000134376	19641	AL513325.1	ENSG00000237861	16469	None	None
L1FLnI_1q31.3m	L1	L1	L1FLnI	chr1	197484099	197494174	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CRB1	ENSG00000134376	5644	DENND1B	ENSG00000213047	10574	None	None
L1FLnI_1q31.3n	L1	L1	L1FLnI	chr1	197621082	197630187	+	coding	DENND1B	protein_coding	ANTISENSE	ENSG00000213047	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.3o	L1	L1	L1FLnI	chr1	197704216	197714246	+	coding	DENND1B	protein_coding	ANTISENSE	ENSG00000213047	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q31.3p	L1	L1	L1FLnI	chr1	197826257	197835783	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	DENND1B	ENSG00000213047	50561	C1orf53	ENSG00000203724	66847	None	None
L1FLnI_1q31.3q	L1	L1	L1FLnI	chr1	197879105	197888483	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C1orf53	ENSG00000203724	14147	DENND1B	ENSG00000213047	103409	None	None
L1FLnI_1q31.3r	L1	L1	L1FLnI	chr1	198308948	198318962	-	coding	NEK7	protein_coding	ANTISENSE	ENSG00000151414	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q32.1a	L1	L1	L1FLnI	chr1	199042196	199052421	+	noncoding	LINC01221,AC105941.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000235492,ENSG00000286541	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr1:199046077-199046210,chr1:199050574-199050754	chr1:199048242-199048260
L1FLnI_1q32.1b	L1	L1	L1FLnI	chr1	199441693	199452034	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL596266.1	ENSG00000231984	300457	LINC02789	ENSG00000231718	48386	None	None
L1FLnI_1q32.1c	L1	L1	L1FLnI	chr1	199535355	199544669	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02789	ENSG00000231718	142048	AL596266.1	ENSG00000231984	207822	None	None
L1FLnI_1q32.1d	L1	L1	L1FLnI	chr1	199595636	199605299	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02789	ENSG00000231718	202329	AL596266.1	ENSG00000231984	147192	None	None
L1FLnI_1q32.1e	L1	L1	L1FLnI	chr1	199596075	199605299	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02789	ENSG00000231718	202768	AL596266.1	ENSG00000231984	147192	None	None
L1FLnI_1q32.1f	L1	L1	L1FLnI	chr1	199629052	199639504	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02789	ENSG00000231718	235745	AL596266.1	ENSG00000231984	112987	None	None
L1FLnI_1q32.1g	L1	L1	L1FLnI	chr1	199643864	199653972	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02789	ENSG00000231718	250557	AL596266.1	ENSG00000231984	98519	None	None
L1FLnI_1q32.1h	L1	L1	L1FLnI	chr1	199880452	199890584	-	coding	RNU6-778P	snRNA	ANTISENSE	ENSG00000200139	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q32.1i	L1	L1	L1FLnI	chr1	200181869	200192019	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NR5A2	ENSG00000116833	4449	CCNQP1	ENSG00000233827	21659	None	None
L1FLnI_1q32.1j	L1	L1	L1FLnI	chr1	200181869	200192009	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NR5A2	ENSG00000116833	4449	CCNQP1	ENSG00000233827	21669	None	None
L1FLnI_1q32.1k	L1	L1	L1FLnI	chr1	201233607	201243762	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PKP1	ENSG00000081277	39690	IGFN1	ENSG00000163395	4655	None	None
L1FLnI_1q32.1l	L1	L1	L1FLnI	chr1	205400199	205410359	-	coding	LEMD1	protein_coding	SENSE	ENSG00000186007	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q32.1m	L1	L1	L1FLnI	chr1	206327308	206336746	-	coding	SRGAP2,AC244023.1	protein_coding,unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000266028,ENSG00000229509	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q32.1n	L1	L1	L1FLnI	chr1	206845315	206854891	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IL19	ENSG00000142224	2334	IL20	ENSG00000162891	10463	chr1:206851795-206852111	None
L1FLnI_1q32.2a	L1	L1	L1FLnI	chr1	207192505	207202569	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL445493.2	ENSG00000243636	8443	C4BPAP2	ENSG00000232621	23229	None	None
L1FLnI_1q32.2b	L1	L1	L1FLnI	chr1	207192505	207202562	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL445493.2	ENSG00000243636	8443	C4BPAP2	ENSG00000232621	23236	None	None
L1FLnI_1q32.2c	L1	L1	L1FLnI	chr1	207203236	207213407	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL445493.2	ENSG00000243636	19174	C4BPAP2	ENSG00000232621	12391	None	None
L1FLnI_1q32.2d	L1	L1	L1FLnI	chr1	207272091	207281278	-	noncoding	AL596218.1	lncRNA	ANTISENSE	ENSG00000237074	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q32.2e	L1	L1	L1FLnI	chr1	207585822	207595112	+	noncoding	CR1,AL137789.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000203710,ENSG00000236911	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q32.2f	L1	L1	L1FLnI	chr1	207726968	207736995	+	coding	CR1L	protein_coding	SENSE	ENSG00000197721	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q32.2g	L1	L1	L1FLnI	chr1	207769905	207779989	-	noncoding	CD46	protein_coding	ANTISENSE	ENSG00000117335	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:207770322-207770330,chr1:207779931-207779936
L1FLnI_1q32.2h	L1	L1	L1FLnI	chr1	208439198	208448428	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01735	ENSG00000261453	158136	AL606753.2	ENSG00000286198	168531	None	None
L1FLnI_1q32.2i	L1	L1	L1FLnI	chr1	208491584	208501295	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01735	ENSG00000261453	105269	AL606753.2	ENSG00000286198	220917	None	None
L1FLnI_1q32.2j	L1	L1	L1FLnI	chr1	208612678	208621842	+	noncoding	LINC01735	lncRNA	ANTISENSE	ENSG00000261453	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q32.2k	L1	L1	L1FLnI	chr1	208699196	208709529	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS26P13	ENSG00000227887	1498	LINC01717	ENSG00000232812	19136	None	None
L1FLnI_1q32.2l	L1	L1	L1FLnI	chr1	208987959	208998079	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01774	ENSG00000236950	12652	AC104465.1	ENSG00000278684	3259	None	None
L1FLnI_1q32.2m	L1	L1	L1FLnI	chr1	209173272	209182619	+	noncoding	AC092810.3,AC092810.2	lncRNA,processed_pseudogene	ANTISENSE,SENSE	ENSG00000232537,ENSG00000228081	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:209176873-209176881,chr1:209176903-209176910
L1FLI_1q32.2	L1	L1	L1FLI	chr1	209912778	209920825	-	coding	SYT14	protein_coding	ANTISENSE	ENSG00000143469	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q32.2n	L1	L1	L1FLnI	chr1	209972714	209982850	-	coding	SYT14	protein_coding	ANTISENSE	ENSG00000143469	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q32.2o	L1	L1	L1FLnI	chr1	209989231	209998136	+	noncoding	SYT14,AL022397.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000143469,ENSG00000287343	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q32.2p	L1	L1	L1FLnI	chr1	210881628	210892048	+	coding	KCNH1,AL590132.1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000143473,ENSG00000284299	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q32.2q	L1	L1	L1FLnI	chr1	210922767	210932167	+	noncoding	KCNH1,AL590132.1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000143473,ENSG00000284299	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q32.2r	L1	L1	L1FLnI	chr1	210922789	210932167	+	noncoding	KCNH1,AL590132.1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000143473,ENSG00000284299	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q32.2s	L1	L1	L1FLnI	chr1	210953401	210963545	-	coding	KCNH1,AL590132.1	protein_coding,protein_coding	SENSE,SENSE	ENSG00000143473,ENSG00000284299	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q32.2t	L1	L1	L1FLnI	chr1	210981794	210991931	-	noncoding	KCNH1,AL590132.1	protein_coding,protein_coding	SENSE,SENSE	ENSG00000143473,ENSG00000284299	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q32.2u	L1	L1	L1FLnI	chr1	210992498	211002641	+	coding	KCNH1,AL590132.1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000143473,ENSG00000284299	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q32.3a	L1	L1	L1FLnI	chr1	211401792	211411911	-	coding	LINC00467	lncRNA	ANTISENSE	ENSG00000153363	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q32.3b	L1	L1	L1FLnI	chr1	211449903	211460010	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ARPC3P2	ENSG00000238137	7097	RD3	ENSG00000198570	16512	None	None
L1FLnI_1q32.3c	L1	L1	L1FLnI	chr1	211449903	211459994	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ARPC3P2	ENSG00000238137	7097	RD3	ENSG00000198570	16528	None	None
L1FLnI_1q32.3d	L1	L1	L1FLnI	chr1	212051491	212060954	+	noncoding	DTL,RPL21P28	protein_coding,processed_pseudogene	SENSE,ANTISENSE	ENSG00000143476,ENSG00000220749	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:212052045-212052046
L1FLnI_1q32.3e	L1	L1	L1FLnI	chr1	212386967	212397088	+	coding	PACC1	protein_coding	ANTISENSE	ENSG00000065600	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:212389043-212389062
L1FLnI_1q32.3f	L1	L1	L1FLnI	chr1	212654527	212664683	+	coding	LINC02773	lncRNA	ANTISENSE	ENSG00000237980	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q32.3g	L1	L1	L1FLnI	chr1	213210393	213220519	+	coding	RPS6KC1	protein_coding	SENSE	ENSG00000136643	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q32.3h	L1	L1	L1FLnI	chr1	213628875	213637909	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL592402.1	ENSG00000225233	49608	AC096639.1	ENSG00000228255	93507	None	None
L1FLnI_1q32.3i	L1	L1	L1FLnI	chr1	213698412	213707605	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096639.1	ENSG00000228255	23811	AL592402.1	ENSG00000225233	119145	None	None
L1FLnI_1q32.3j	L1	L1	L1FLnI	chr1	213706047	213716468	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096639.1	ENSG00000228255	14948	AL592402.1	ENSG00000225233	126780	None	None
L1FLnI_1q32.3k	L1	L1	L1FLnI	chr1	214089678	214099070	+	noncoding	LINC02775	lncRNA	ANTISENSE	ENSG00000283518	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q41a	L1	L1	L1FLnI	chr1	214721195	214731605	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP24	ENSG00000185221	139129	CENPF	ENSG00000117724	56624	None	None
L1FLnI_1q41b	L1	L1	L1FLnI	chr1	215175829	215186701	-	noncoding	KCNK2	protein_coding	ANTISENSE	ENSG00000082482	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q41c	L1	L1	L1FLnI	chr1	215177243	215186701	-	noncoding	KCNK2	protein_coding	ANTISENSE	ENSG00000082482	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q41d	L1	L1	L1FLnI	chr1	215375935	215386467	+	noncoding	VDAC1P10	processed_pseudogene	SENSE	ENSG00000232809	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q41e	L1	L1	L1FLnI	chr1	215426655	215437110	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCTD3	ENSG00000136636	130194	AL450990.1	ENSG00000282265	32237	None	None
L1FLnI_1q41f	L1	L1	L1FLnI	chr1	215426655	215436686	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCTD3	ENSG00000136636	130618	AL450990.1	ENSG00000282265	32237	None	None
L1FLnI_1q41g	L1	L1	L1FLnI	chr1	215528703	215538871	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL450990.1	ENSG00000282265	134285	KCTD3	ENSG00000136636	28433	None	None
L1FLnI_1q41h	L1	L1	L1FLnI	chr1	215697331	215707769	-	noncoding	USH2A	protein_coding	SENSE	ENSG00000042781	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q41i	L1	L1	L1FLnI	chr1	216482147	216492114	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	USH2A	ENSG00000042781	58699	ESRRG	ENSG00000196482	11132	None	None
L1FLnI_1q41j	L1	L1	L1FLnI	chr1	217140868	217151250	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ESRRG	ENSG00000196482	3113	GPATCH2	ENSG00000092978	275742	None	None
L1FLnI_1q41k	L1	L1	L1FLnI	chr1	217375873	217386328	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ESRRG	ENSG00000196482	238118	GPATCH2	ENSG00000092978	40664	None	None
L1FLnI_1q41l	L1	L1	L1FLnI	chr1	217689994	217700023	-	coding	SPATA17	protein_coding	ANTISENSE	ENSG00000162814	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q41m	L1	L1	L1FLnI	chr1	218008729	218018752	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL355526.1	ENSG00000230714	13083	LINC00210	ENSG00000231814	87925	None	None
L1FLnI_1q41n	L1	L1	L1FLnI	chr1	218627314	218637734	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NXNP1	ENSG00000226693	243866	AC092015.1	ENSG00000212610	85415	None	None
L1FLnI_1q41o	L1	L1	L1FLnI	chr1	218627314	218636475	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NXNP1	ENSG00000226693	245125	AC092015.1	ENSG00000212610	85415	None	None
L1FLnI_1q41p	L1	L1	L1FLnI	chr1	219084952	219095263	+	noncoding	LYPLAL1-DT	lncRNA	ANTISENSE	ENSG00000228063	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr1:219085853-219086223,chr1:219089104-219089279,chr1:219090633-219090999,chr1:219091262-219091577	chr1:219090769-219090782,chr1:219092261-219092275
L1FLnI_1q41q	L1	L1	L1FLnI	chr1	219250064	219258564	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096642.1	ENSG00000277007	12210	AL360093.1	ENSG00000223842	24567	None	None
L1FLnI_1q41r	L1	L1	L1FLnI	chr1	219638315	219647045	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZC3H11B	ENSG00000215817	25170	SLC30A10	ENSG00000196660	38382	None	None
L1FLnI_1q41s	L1	L1	L1FLnI	chr1	219835832	219846007	+	coding	SLC30A10	protein_coding	ANTISENSE	ENSG00000196660	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q41t	L1	L1	L1FLnI	chr1	219842797	219853500	+	noncoding	SLC30A10	protein_coding	ANTISENSE	ENSG00000196660	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q41u	L1	L1	L1FLnI	chr1	219842797	219853069	+	noncoding	SLC30A10	protein_coding	ANTISENSE	ENSG00000196660	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q41v	L1	L1	L1FLnI	chr1	219853439	219862253	-	noncoding	SLC30A10	protein_coding	SENSE	ENSG00000196660	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q41w	L1	L1	L1FLnI	chr1	219860072	219870095	+	coding	SLC30A10	protein_coding	ANTISENSE	ENSG00000196660	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q41x	L1	L1	L1FLnI	chr1	219883838	219893336	+	coding	SLC30A10	protein_coding	ANTISENSE	ENSG00000196660	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q41y	L1	L1	L1FLnI	chr1	220605015	220615192	-	coding	MARK1	protein_coding	ANTISENSE	ENSG00000116141	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q41z	L1	L1	L1FLnI	chr1	220605022	220615192	-	coding	MARK1	protein_coding	ANTISENSE	ENSG00000116141	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q41aa	L1	L1	L1FLnI	chr1	220638114	220648562	+	noncoding	MARK1	protein_coding	SENSE	ENSG00000116141	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:220638133-220638136
L1FLnI_1q41ba	L1	L1	L1FLnI	chr1	220738746	220747332	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MARC2	ENSG00000117791	893	C1orf115	ENSG00000162817	39593	None	None
L1FLnI_1q41ca	L1	L1	L1FLnI	chr1	220858289	220867896	-	noncoding	AL445423.3,HLX-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000286231,ENSG00000257551	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q41da	L1	L1	L1FLnI	chr1	221043634	221054054	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HLX	ENSG00000136630	158575	AL445466.1	ENSG00000226211	79811	chr1:221045910-221046062,chr1:221046300-221046690	chr1:221046448-221046464,chr1:221047100-221047125,chr1:221047127-221047136
L1FLnI_1q41ea	L1	L1	L1FLnI	chr1	221256955	221267115	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02817	ENSG00000234754	62965	AL445466.1	ENSG00000226211	122734	None	None
L1FLnI_1q41fa	L1	L1	L1FLnI	chr1	221382566	221392708	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL360013.2	ENSG00000232436	115851	LINC02817	ENSG00000234754	46077	None	None
L1FLnI_1q41ga	L1	L1	L1FLnI	chr1	221392665	221404363	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02817	ENSG00000234754	56176	AL360013.2	ENSG00000232436	104196	None	None
L1FLnI_1q41ha	L1	L1	L1FLnI	chr1	221499744	221508398	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02817	ENSG00000234754	163255	AL360013.2	ENSG00000232436	161	None	None
L1FLnI_1q41ia	L1	L1	L1FLnI	chr1	221949075	221958318	+	coding	LINC02257	lncRNA	ANTISENSE	ENSG00000238042	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q41ja	L1	L1	L1FLnI	chr1	222135730	222144547	+	noncoding	AL356108.1	lncRNA	ANTISENSE	ENSG00000236230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q41ka	L1	L1	L1FLnI	chr1	222142004	222152325	+	noncoding	AL356108.1	lncRNA	ANTISENSE	ENSG00000236230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q41la	L1	L1	L1FLnI	chr1	222869286	222878441	-	coding	AC093152.1,DISP1	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000278610,ENSG00000154309	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q41ma	L1	L1	L1FLnI	chr1	223164154	223174141	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL359979.2	ENSG00000236846	19200	AL359979.1	ENSG00000226601	7003	None	None
L1FLnI_1q41na	L1	L1	L1FLnI	chr1	223234697	223245164	-	noncoding	SUSD4	protein_coding	SENSE	ENSG00000143502	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q41oa	L1	L1	L1FLnI	chr1	223274590	223284743	+	coding	SUSD4	protein_coding	ANTISENSE	ENSG00000143502	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q41pa	L1	L1	L1FLnI	chr1	223366044	223376187	-	coding	RNU4-57P	snRNA	ANTISENSE	ENSG00000251789	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q41qa	L1	L1	L1FLnI	chr1	223366061	223376187	-	coding	RNU4-57P	snRNA	ANTISENSE	ENSG00000251789	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q41ra	L1	L1	L1FLnI	chr1	223395036	223405057	-	coding	CCDC185	protein_coding	ANTISENSE	ENSG00000178395	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q41sa	L1	L1	L1FLnI	chr1	223443494	223453523	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC185	ENSG00000178395	48029	CAPN8	ENSG00000203697	84484	None	None
L1FLnI_1q42.12a	L1	L1	L1FLnI	chr1	224930417	224939553	+	coding	DNAH14	protein_coding	SENSE	ENSG00000185842	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q42.12b	L1	L1	L1FLnI	chr1	224940025	224950118	-	noncoding	DNAH14	protein_coding	ANTISENSE	ENSG00000185842	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q42.12c	L1	L1	L1FLnI	chr1	225008226	225017911	-	noncoding	DNAH14	protein_coding	ANTISENSE	ENSG00000185842	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q42.12d	L1	L1	L1FLnI	chr1	225055037	225065156	-	coding	DNAH14	protein_coding	ANTISENSE	ENSG00000185842	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q42.12e	L1	L1	L1FLnI	chr1	225087606	225096159	+	noncoding	DNAH14	protein_coding	SENSE	ENSG00000185842	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q42.12f	L1	L1	L1FLnI	chr1	225101396	225110874	-	coding	DNAH14	protein_coding	ANTISENSE	ENSG00000185842	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q42.12g	L1	L1	L1FLnI	chr1	225107974	225118560	-	noncoding	DNAH14	protein_coding	ANTISENSE	ENSG00000185842	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q42.12h	L1	L1	L1FLnI	chr1	225131696	225140847	-	noncoding	DNAH14	protein_coding	ANTISENSE	ENSG00000185842	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q42.12i	L1	L1	L1FLnI	chr1	225164690	225174775	+	coding	DNAH14	protein_coding	SENSE	ENSG00000185842	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q42.12j	L1	L1	L1FLnI	chr1	225211408	225221517	-	coding	DNAH14	protein_coding	ANTISENSE	ENSG00000185842	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q42.12k	L1	L1	L1FLnI	chr1	225211419	225221517	-	coding	DNAH14	protein_coding	ANTISENSE	ENSG00000185842	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q42.12l	L1	L1	L1FLnI	chr1	225233989	225243133	-	noncoding	DNAH14	protein_coding	ANTISENSE	ENSG00000185842	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q42.12m	L1	L1	L1FLnI	chr1	225309963	225320310	-	coding	DNAH14	protein_coding	ANTISENSE	ENSG00000185842	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q42.12n	L1	L1	L1FLnI	chr1	226498744	226508367	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359704.3	ENSG00000287627	29938	CDKN2AIPNLP1	ENSG00000177770	5255	None	None
L1FLnI_1q42.13a	L1	L1	L1FLnI	chr1	227470089	227480521	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BTF3P9	ENSG00000224834	35743	AL451054.2	ENSG00000237193	1732	None	None
L1FLnI_1q42.13b	L1	L1	L1FLnI	chr1	227527835	227536761	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP77	ENSG00000202264	24420	AL451054.4	ENSG00000287205	7216	None	None
L1FLnI_1q42.13c	L1	L1	L1FLnI	chr1	227696397	227706271	+	noncoding	ZNF847P	unprocessed_pseudogene	ANTISENSE	ENSG00000215812	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q42.13d	L1	L1	L1FLnI	chr1	227868394	227877705	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRSS38	ENSG00000185888	21924	WNT9A	ENSG00000143816	40951	None	None
L1FLnI_1q42.13e	L1	L1	L1FLnI	chr1	228520192	228530335	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP19	ENSG00000202056	25458	BTNL10	ENSG00000215811	7887	None	None
L1FLnI_1q42.13f	L1	L1	L1FLnI	chr1	228703912	228713323	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FTH1P2	ENSG00000234975	16086	RHOU	ENSG00000116574	22156	chr1:228712991-228713133	None
L1FLnI_1q42.13g	L1	L1	L1FLnI	chr1	229355749	229364366	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-180P	ENSG00000252506	18762	CCSAP	ENSG00000154429	12455	None	None
L1FLnI_1q42.13h	L1	L1	L1FLnI	chr1	229741508	229750479	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01682	ENSG00000227043	62438	HMGB1P26	ENSG00000225984	35647	None	None
L1FLnI_1q42.13i	L1	L1	L1FLnI	chr1	230470133	230480566	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01737	ENSG00000232964	112094	AL133516.1	ENSG00000282564	33311	None	None
L1FLnI_1q42.2a	L1	L1	L1FLnI	chr1	230520688	230531225	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01737	ENSG00000232964	61435	AL133516.1	ENSG00000282564	83866	None	None
L1FLnI_1q42.2b	L1	L1	L1FLnI	chr1	230653487	230662312	-	coding	COG2	protein_coding	ANTISENSE	ENSG00000135775	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q42.2c	L1	L1	L1FLnI	chr1	230998409	231009070	+	noncoding	ARV1	protein_coding	SENSE	ENSG00000173409	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q42.2d	L1	L1	L1FLnI	chr1	231645603	231655725	-	noncoding	TSNAX-DISC1,DISC1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000270106,ENSG00000162946	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q42.2e	L1	L1	L1FLnI	chr1	231906668	231916257	-	noncoding	DISC1	protein_coding	ANTISENSE	ENSG00000162946	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:231906849-231906863
L1FLnI_1q42.2f	L1	L1	L1FLnI	chr1	233557929	233567293	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL360006.1	ENSG00000287423	14296	KCNK1	ENSG00000135750	46813	chr1:233566979-233567335	None
L1FLnI_1q42.2g	L1	L1	L1FLnI	chr1	233763667	233773796	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL663058.1	ENSG00000225486	62284	AL357972.1	ENSG00000286109	32921	None	None
L1FLnI_1q42.2h	L1	L1	L1FLnI	chr1	233818471	233828887	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357972.1	ENSG00000286109	87725	AL663058.1	ENSG00000225486	7193	None	None
L1FLnI_1q42.2i	L1	L1	L1FLnI	chr1	233921182	233930507	-	coding	SLC35F3	protein_coding	ANTISENSE	ENSG00000183780	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q42.2j	L1	L1	L1FLnI	chr1	234049128	234059284	-	noncoding	SLC35F3	protein_coding	ANTISENSE	ENSG00000183780	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:234058358-234058360
L1FLnI_1q42.2k	L1	L1	L1FLnI	chr1	234049140	234059284	-	noncoding	SLC35F3	protein_coding	ANTISENSE	ENSG00000183780	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:234058358-234058360
L1FLnI_1q42.3a	L1	L1	L1FLnI	chr1	235381315	235391260	-	coding	TBCE,TBCE	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000285053,ENSG00000284770	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q42.3b	L1	L1	L1FLnI	chr1	235841473	235852063	+	noncoding	LYST	protein_coding	ANTISENSE	ENSG00000143669	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:235852052-235852061
L1FLnI_1q42.3c	L1	L1	L1FLnI	chr1	236185853	236196292	-	noncoding	GPR137B	protein_coding	ANTISENSE	ENSG00000077585	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q42.3d	L1	L1	L1FLnI	chr1	236185858	236196292	-	noncoding	GPR137B	protein_coding	ANTISENSE	ENSG00000077585	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_1q43	L1	L1	L1FLI	chr1	237018447	237026499	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RYR2	ENSG00000198626	15685	AL359259.1	ENSG00000288099	4247	None	None
L1FLnI_1q43a	L1	L1	L1FLnI	chr1	237071766	237081793	+	coding	RYR2	protein_coding	SENSE	ENSG00000198626	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q43b	L1	L1	L1FLnI	chr1	237816723	237827150	+	noncoding	RYR2	protein_coding	SENSE	ENSG00000198626	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q43c	L1	L1	L1FLnI	chr1	237834917	237843885	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RYR2	ENSG00000198626	929	AL359924.1	ENSG00000237250	18290	None	None
L1FLnI_1q43d	L1	L1	L1FLnI	chr1	238036616	238046765	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	YWHAQP9	ENSG00000230019	60971	MTND5P18	ENSG00000227860	85080	None	None
L1FLnI_1q43e	L1	L1	L1FLnI	chr1	238157740	238169149	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356010.2	ENSG00000234464	69794	YWHAQP9	ENSG00000230019	49173	None	None
L1FLnI_1q43f	L1	L1	L1FLnI	chr1	239068420	239078557	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590135.1	ENSG00000227854	15517	AC093426.2	ENSG00000287589	126581	None	None
L1FLnI_1q43g	L1	L1	L1FLnI	chr1	239078741	239088875	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093426.2	ENSG00000287589	116263	AL590135.1	ENSG00000227854	25838	None	None
L1ORF2_1q43	L1	L1	L1ORF2	chr1	239622485	239630530	-	coding	CHRM3	protein_coding	ANTISENSE	ENSG00000133019	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q43h	L1	L1	L1FLnI	chr1	239637270	239647408	-	coding	CHRM3	protein_coding	ANTISENSE	ENSG00000133019	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q43i	L1	L1	L1FLnI	chr1	240894759	240904900	-	coding	RGS7	protein_coding	SENSE	ENSG00000182901	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q43j	L1	L1	L1FLnI	chr1	240894789	240904900	-	coding	RGS7	protein_coding	SENSE	ENSG00000182901	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q43k	L1	L1	L1FLnI	chr1	241424487	241434894	-	noncoding	AL359764.2	lncRNA	ANTISENSE	ENSG00000287516	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q43l	L1	L1	L1FLnI	chr1	241572788	241582245	-	noncoding	KMO	protein_coding	ANTISENSE	ENSG00000117009	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q43m	L1	L1	L1FLnI	chr1	242045063	242055085	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TUBB8P6	ENSG00000224625	2000	MAP1LC3C	ENSG00000197769	45965	None	None
L1FLnI_1q43n	L1	L1	L1FLnI	chr1	242151862	242162272	-	noncoding	PLD5,AL591686.2	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000180287,ENSG00000272865	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q43o	L1	L1	L1FLnI	chr1	242165642	242175553	+	noncoding	PLD5,AL591686.2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000180287,ENSG00000272865	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:242168865-242168869
L1FLnI_1q43p	L1	L1	L1FLnI	chr1	242477575	242487722	+	coding	PLD5	protein_coding	ANTISENSE	ENSG00000180287	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q43q	L1	L1	L1FLnI	chr1	242583144	242593592	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PLD5	ENSG00000180287	58447	AC099785.1	ENSG00000270859	77548	None	None
L1FLnI_1q43r	L1	L1	L1FLnI	chr1	242848673	242859168	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445675.1	ENSG00000270818	22898	RSL24D1P4	ENSG00000215800	75570	None	None
L1FLnI_1q44a	L1	L1	L1FLnI	chr1	243576543	243587395	+	noncoding	AKT3	protein_coding	ANTISENSE	ENSG00000117020	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:243582445-243582448,chr1:243583537-243583541
L1FLnI_1q44b	L1	L1	L1FLnI	chr1	243803549	243813690	+	coding	AKT3	protein_coding	ANTISENSE	ENSG00000117020	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q44c	L1	L1	L1FLnI	chr1	243816720	243825905	+	noncoding	AKT3	protein_coding	ANTISENSE	ENSG00000117020	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q44d	L1	L1	L1FLnI	chr1	244530761	244540351	-	noncoding	CATSPERE	protein_coding	ANTISENSE	ENSG00000179397	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q44e	L1	L1	L1FLnI	chr1	244562235	244572886	-	noncoding	CATSPERE	protein_coding	ANTISENSE	ENSG00000179397	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q44f	L1	L1	L1FLnI	chr1	245592673	245601592	-	noncoding	KIF26B	protein_coding	ANTISENSE	ENSG00000162849	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q44g	L1	L1	L1FLnI	chr1	245635892	245645564	-	noncoding	KIF26B	protein_coding	ANTISENSE	ENSG00000162849	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q44h	L1	L1	L1FLnI	chr1	245813041	245823060	+	coding	SMYD3	protein_coding	ANTISENSE	ENSG00000185420	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:245822967-245822997
L1FLnI_1q44i	L1	L1	L1FLnI	chr1	246711217	246720411	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL591848.2	ENSG00000235021	19396	SCCPDH	ENSG00000143653	3998	None	None
L1FLnI_1q44j	L1	L1	L1FLnI	chr1	247507035	247517474	-	noncoding	GCSAML	protein_coding	ANTISENSE	ENSG00000169224	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr1:247507106-247507112,chr1:247507113-247507122
L1FLnI_1q44k	L1	L1	L1FLnI	chr1	247566655	247577136	-	coding	GCSAML,AL606804.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000169224,ENSG00000236817	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr1:247574209-247574223,chr1:247574670-247574680,chr1:247574922-247574932,chr1:247575086-247575099,chr1:247575324-247575335,chr1:247577055-247577060
L1FLnI_1q44l	L1	L1	L1FLnI	chr1	247566662	247577136	-	coding	GCSAML,AL606804.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000169224,ENSG00000236817	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr1:247574209-247574223,chr1:247574670-247574680,chr1:247574922-247574932,chr1:247575086-247575099,chr1:247575324-247575335,chr1:247577055-247577060
L1FLnI_1q44m	L1	L1	L1FLnI	chr1	247629678	247638844	-	coding	AL606804.1	lncRNA	SENSE	ENSG00000236817	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_1q44	L1	L1	L1FLI	chr1	247686172	247694218	+	coding	AL390860.1	lncRNA	SENSE	ENSG00000235749	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr1:247687163-247687165
L1FLnI_1q44n	L1	L1	L1FLnI	chr1	247887824	247897838	-	coding	OR2W3	protein_coding	ANTISENSE	ENSG00000238243	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q44o	L1	L1	L1FLnI	chr1	248064014	248074136	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR2L3	ENSG00000198128	607	OR2T32P	ENSG00000197067	9386	None	None
L1FLnI_1q44p	L1	L1	L1FLnI	chr1	248124828	248134637	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR2M1P	ENSG00000177233	1946	OR2M5	ENSG00000162727	10511	None	None
L1FLnI_1q44q	L1	L1	L1FLnI	chr1	248166061	248176089	-	coding	OR2M2	protein_coding	ANTISENSE	ENSG00000198601	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q44r	L1	L1	L1FLnI	chr1	248180663	248190146	-	coding	OR2M2	protein_coding	ANTISENSE	ENSG00000198601	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q44s	L1	L1	L1FLnI	chr1	248185299	248194931	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR2M2	ENSG00000198601	4232	OR2M3	ENSG00000228198	2334	None	None
L1FLnI_1q44t	L1	L1	L1FLnI	chr1	248203748	248213786	-	noncoding	OR2M3	protein_coding	ANTISENSE	ENSG00000228198	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q44u	L1	L1	L1FLnI	chr1	248224459	248233529	-	noncoding	OR2M4	protein_coding	ANTISENSE	ENSG00000171180	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q44v	L1	L1	L1FLnI	chr1	248249363	248259377	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR2M4	ENSG00000171180	4684	OR2T33	ENSG00000177212	10540	None	None
L1FLnI_1q44w	L1	L1	L1FLnI	chr1	248311074	248320917	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR2M7	ENSG00000177186	2713	OR2T12	ENSG00000177201	7650	None	None
L1FLnI_1q44x	L1	L1	L1FLnI	chr1	248513622	248522766	-	coding	OR2G6	protein_coding	ANTISENSE	ENSG00000188558	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q44y	L1	L1	L1FLnI	chr1	248524459	248534441	+	coding	OR2G6	protein_coding	SENSE	ENSG00000188558	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_1q44z	L1	L1	L1FLnI	chr1	248758143	248768295	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LYPD8	ENSG00000259823	2384	DPY19L4P1	ENSG00000229663	3340	None	None
L1FLnI_2p25.3a	L1	L1	L1FLnI	chr2	323027	332689	-	noncoding	LINC01865	lncRNA	ANTISENSE	ENSG00000233684	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p25.3b	L1	L1	L1FLnI	chr2	796044	806067	+	coding	LINC01115	lncRNA	ANTISENSE	ENSG00000237667	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p25.3c	L1	L1	L1FLnI	chr2	994171	1003755	+	noncoding	SNTG2	protein_coding	SENSE	ENSG00000172554	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:996703-996708
L1FLnI_2p25.3d	L1	L1	L1FLnI	chr2	994171	1003384	+	noncoding	SNTG2	protein_coding	SENSE	ENSG00000172554	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:996703-996708
L1FLnI_2p25.3e	L1	L1	L1FLnI	chr2	1041867	1051251	-	noncoding	SNTG2	protein_coding	ANTISENSE	ENSG00000172554	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p25.3f	L1	L1	L1FLnI	chr2	1382236	1392349	-	coding	AC105450.1,TPO	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000231482,ENSG00000115705	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p25.3g	L1	L1	L1FLnI	chr2	1756465	1766542	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PXDN	ENSG00000130508	11613	MYT1L	ENSG00000186487	22571	None	None
L1FLnI_2p25.3h	L1	L1	L1FLnI	chr2	2587274	2596110	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MYT1L	ENSG00000186487	255610	AC018685.2	ENSG00000234929	42068	None	None
L1FLnI_2p25.3i	L1	L1	L1FLnI	chr2	3078666	3089024	+	coding	LINC01250	lncRNA	ANTISENSE	ENSG00000234423	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p25.3j	L1	L1	L1FLnI	chr2	3365748	3375895	+	coding	EIPR1	protein_coding	ANTISENSE	ENSG00000032389	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p25.3k	L1	L1	L1FLnI	chr2	3793866	3803895	-	coding	DCDC2C	protein_coding	ANTISENSE	ENSG00000214866	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p25.3l	L1	L1	L1FLnI	chr2	3936076	3944817	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01304	ENSG00000237401	12835	DCDC2C	ENSG00000214866	88068	None	None
L1FLnI_2p25.3m	L1	L1	L1FLnI	chr2	4114799	4123375	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC012445.1	ENSG00000229550	13269	LINC01304	ENSG00000237401	140675	None	None
L1ORF2_2p25.3	L1	L1	L1ORF2	chr2	4156808	4164857	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC012445.1	ENSG00000229550	16077	NPM1P48	ENSG00000231821	349347	None	None
L1FLnI_2p25.3n	L1	L1	L1FLnI	chr2	4308752	4317319	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPM1P48	ENSG00000231821	196885	AC012445.1	ENSG00000229550	168021	None	None
L1FLnI_2p25.2a	L1	L1	L1FLnI	chr2	4639470	4649465	+	coding	LINC01249	lncRNA	ANTISENSE	ENSG00000231532	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_2p25.2	L1	L1	L1ORF2	chr2	4732729	4740774	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01249	ENSG00000231532	76231	AC092169.1	ENSG00000252238	86227	chr2:4740709-4741106	None
L1FLnI_2p25.2b	L1	L1	L1FLnI	chr2	6039434	6051822	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SILC1	ENSG00000232044	35924	AC017053.1	ENSG00000234275	206526	None	None
L1FLnI_2p25.2c	L1	L1	L1FLnI	chr2	6326966	6336579	-	coding	AC017053.1	lncRNA	SENSE	ENSG00000234275	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p25.2d	L1	L1	L1FLnI	chr2	6326988	6336579	-	coding	AC017053.1	lncRNA	SENSE	ENSG00000234275	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p25.2e	L1	L1	L1FLnI	chr2	6898327	6908009	-	noncoding	AC017076.1	lncRNA	SENSE	ENSG00000271947	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr2:6907664-6907915	None
L1FLnI_2p25.1a	L1	L1	L1FLnI	chr2	7533511	7543466	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6ATAC37P	ENSG00000221255	33375	AC013460.1	ENSG00000229727	82967	None	None
L1FLnI_2p25.1b	L1	L1	L1FLnI	chr2	8123843	8132454	+	coding	LINC00298,LINC00299	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000235665,ENSG00000236790	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p25.1c	L1	L1	L1FLnI	chr2	9034833	9044982	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB1P25	ENSG00000230886	15934	RPL30P3	ENSG00000223640	36413	None	None
L1FLnI_2p25.1d	L1	L1	L1FLnI	chr2	9034833	9044996	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB1P25	ENSG00000230886	15934	RPL30P3	ENSG00000223640	36399	None	None
L1FLnI_2p25.1e	L1	L1	L1FLnI	chr2	9857464	9867593	+	coding	TAF1B	protein_coding	SENSE	ENSG00000115750	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p25.1f	L1	L1	L1FLnI	chr2	10995607	11005636	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC062028.2	ENSG00000226080	96506	KCNF1	ENSG00000162975	81382	None	None
L1FLnI_2p25.1g	L1	L1	L1FLnI	chr2	11880962	11891103	-	coding	MIR3681HG	lncRNA	ANTISENSE	ENSG00000224184	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:11887635-11887640
L1FLnI_2p24.3a	L1	L1	L1FLnI	chr2	12133602	12143111	-	noncoding	MIR3681HG	lncRNA	ANTISENSE	ENSG00000224184	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.3b	L1	L1	L1FLnI	chr2	12521248	12531271	-	coding	MIR3681HG	lncRNA	ANTISENSE	ENSG00000224184	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.3c	L1	L1	L1FLnI	chr2	13308528	13318992	-	noncoding	AC093912.1	lncRNA	ANTISENSE	ENSG00000285876	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.3d	L1	L1	L1FLnI	chr2	13308528	13318250	-	noncoding	AC093912.1	lncRNA	ANTISENSE	ENSG00000285876	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.3e	L1	L1	L1FLnI	chr2	13373521	13382867	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093912.1	ENSG00000285876	41838	AC073062.1	ENSG00000229370	154806	None	None
L1FLnI_2p24.3f	L1	L1	L1FLnI	chr2	13421268	13431743	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073062.1	ENSG00000229370	105930	AC093912.1	ENSG00000285876	89585	None	None
L1FLnI_2p24.3g	L1	L1	L1FLnI	chr2	13657542	13666791	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00276	ENSG00000230448	43740	AC073062.1	ENSG00000229370	48374	None	None
L1FLnI_2p24.3h	L1	L1	L1FLnI	chr2	13657542	13666354	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00276	ENSG00000230448	44177	AC073062.1	ENSG00000229370	48374	None	None
L1FLnI_2p24.3i	L1	L1	L1FLnI	chr2	13732772	13742784	-	coding	LINC00276,AC016730.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000230448,ENSG00000227718	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.3j	L1	L1	L1FLnI	chr2	13741382	13750383	+	noncoding	LINC00276,AC016730.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000230448,ENSG00000227718	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.3k	L1	L1	L1FLnI	chr2	14078319	14088251	+	coding	LINC00276	lncRNA	ANTISENSE	ENSG00000230448	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.3l	L1	L1	L1FLnI	chr2	14095635	14105791	+	coding	LINC00276	lncRNA	ANTISENSE	ENSG00000230448	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.3m	L1	L1	L1FLnI	chr2	14405280	14414672	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00276	ENSG00000230448	4317	AC131957.1	ENSG00000237261	116269	None	None
L1FLnI_2p24.3n	L1	L1	L1FLnI	chr2	14500954	14511109	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC131957.1	ENSG00000237261	19832	LINC00276	ENSG00000230448	99991	None	None
L1FLnI_2p24.3o	L1	L1	L1FLnI	chr2	14782823	14792977	-	coding	AC068286.2	lncRNA	SENSE	ENSG00000287291	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.3p	L1	L1	L1FLnI	chr2	14844566	14854578	+	coding	AC068286.2	lncRNA	ANTISENSE	ENSG00000287291	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:14854173-14854547	None
L1FLnI_2p24.3q	L1	L1	L1FLnI	chr2	15312751	15322897	+	coding	NBAS	protein_coding	ANTISENSE	ENSG00000151779	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.3r	L1	L1	L1FLnI	chr2	15312751	15322884	+	coding	NBAS	protein_coding	ANTISENSE	ENSG00000151779	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.3s	L1	L1	L1FLnI	chr2	15436002	15446167	+	coding	NBAS	protein_coding	ANTISENSE	ENSG00000151779	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_2p24.2	L1	L1	L1FLI	chr2	16592713	16600760	-	coding	FAM49A	protein_coding	SENSE	ENSG00000197872	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.2a	L1	L1	L1FLnI	chr2	17364533	17373351	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSMC1P10	ENSG00000236348	11740	ZFYVE9P2	ENSG00000214843	79638	chr2:17373229-17373316	None
L1FLnI_2p24.2b	L1	L1	L1FLnI	chr2	17441964	17452222	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSMC1P10	ENSG00000236348	55547	RAD51AP2	ENSG00000214842	58362	None	None
L1FLnI_2p24.2c	L1	L1	L1FLnI	chr2	17888129	17897425	-	noncoding	KCNS3	protein_coding	ANTISENSE	ENSG00000170745	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.2d	L1	L1	L1FLnI	chr2	17902949	17913096	-	coding	KCNS3	protein_coding	ANTISENSE	ENSG00000170745	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.2e	L1	L1	L1FLnI	chr2	17902960	17913096	-	coding	KCNS3	protein_coding	ANTISENSE	ENSG00000170745	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.2f	L1	L1	L1FLnI	chr2	17982633	17992579	-	coding	KCNS3	protein_coding	ANTISENSE	ENSG00000170745	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.2g	L1	L1	L1FLnI	chr2	18011518	18021524	-	coding	KCNS3	protein_coding	ANTISENSE	ENSG00000170745	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.2h	L1	L1	L1FLnI	chr2	18138586	18148785	-	coding	KCNS3	protein_coding	ANTISENSE	ENSG00000170745	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.2i	L1	L1	L1FLnI	chr2	18138597	18148785	-	coding	KCNS3	protein_coding	ANTISENSE	ENSG00000170745	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.2j	L1	L1	L1FLnI	chr2	18161723	18172165	-	coding	KCNS3	protein_coding	ANTISENSE	ENSG00000170745	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.2k	L1	L1	L1FLnI	chr2	18457709	18467823	-	noncoding	AC079148.3	lncRNA	ANTISENSE	ENSG00000287881	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.2l	L1	L1	L1FLnI	chr2	18691700	18701837	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC106053.1	ENSG00000224626	82970	NT5C1B	ENSG00000185013	102128	None	None
L1FLnI_2p24.1a	L1	L1	L1FLnI	chr2	19014037	19024446	-	coding	LINC01376	lncRNA	SENSE	ENSG00000236204	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr2:19021137-19021346	None
L1FLnI_2p24.1b	L1	L1	L1FLnI	chr2	19085768	19095888	+	noncoding	LINC01376	lncRNA	ANTISENSE	ENSG00000236204	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.1c	L1	L1	L1FLnI	chr2	19178903	19188921	-	noncoding	LINC01376	lncRNA	SENSE	ENSG00000236204	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.1d	L1	L1	L1FLnI	chr2	19302341	19312362	+	coding	LINC01376	lncRNA	ANTISENSE	ENSG00000236204	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.1e	L1	L1	L1FLnI	chr2	19383473	19393603	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC010096.1	ENSG00000234597	64617	OSR1	ENSG00000143867	24850	None	None
L1FLnI_2p24.1f	L1	L1	L1FLnI	chr2	19577933	19586596	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01808	ENSG00000237992	57838	AC019055.1	ENSG00000235911	125119	None	None
L1FLnI_2p24.1g	L1	L1	L1FLnI	chr2	19613582	19622447	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01808	ENSG00000237992	93487	AC019055.1	ENSG00000235911	89268	chr2:19614149-19614459	None
L1FLnI_2p24.1h	L1	L1	L1FLnI	chr2	20454808	20465284	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023137.2	ENSG00000228950	1861	AC023137.1	ENSG00000200829	15560	None	None
L1FLnI_2p24.1i	L1	L1	L1FLnI	chr2	20904953	20915112	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC115619.1	ENSG00000261012	84201	LINC02850	ENSG00000236436	43292	None	None
L1FLnI_2p24.1j	L1	L1	L1FLnI	chr2	21208046	21218237	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC018742.1	ENSG00000233005	2932	AC067959.1	ENSG00000271629	9150	None	None
L1FLnI_2p24.1k	L1	L1	L1FLnI	chr2	21208077	21218237	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC018742.1	ENSG00000233005	2932	AC067959.1	ENSG00000271629	9181	None	None
L1FLnI_2p24.1l	L1	L1	L1FLnI	chr2	21332440	21342564	+	noncoding	AC018742.1,AC011752.1	lncRNA,lncRNA	SENSE,SENSE	ENSG00000233005,ENSG00000231204	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.1m	L1	L1	L1FLnI	chr2	21520503	21530590	-	noncoding	AC018742.1,AC011752.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000233005,ENSG00000231204	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.1n	L1	L1	L1FLnI	chr2	21610348	21621979	-	noncoding	AC018742.1,AC009411.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000233005,ENSG00000235537	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.1o	L1	L1	L1FLnI	chr2	21827490	21836012	-	noncoding	AC018742.1	lncRNA	ANTISENSE	ENSG00000233005	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.1p	L1	L1	L1FLnI	chr2	21902813	21912844	-	coding	AC018742.1	lncRNA	ANTISENSE	ENSG00000233005	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.1q	L1	L1	L1FLnI	chr2	21902821	21912844	-	coding	AC018742.1	lncRNA	ANTISENSE	ENSG00000233005	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.1r	L1	L1	L1FLnI	chr2	22145195	22154188	-	noncoding	AC096570.1	lncRNA	SENSE	ENSG00000228999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.1s	L1	L1	L1FLnI	chr2	22152944	22162964	+	coding	AC096570.1	lncRNA	ANTISENSE	ENSG00000228999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.1t	L1	L1	L1FLnI	chr2	22152944	22162954	+	coding	AC096570.1	lncRNA	ANTISENSE	ENSG00000228999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.1u	L1	L1	L1FLnI	chr2	22258990	22268048	-	noncoding	AC096570.1	lncRNA	SENSE	ENSG00000228999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.1v	L1	L1	L1FLnI	chr2	22586529	22595889	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01884	ENSG00000233587	37729	RN7SKP27	ENSG00000222616	265663	None	None
L1FLnI_2p24.1w	L1	L1	L1FLnI	chr2	22586761	22595889	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01884	ENSG00000233587	37961	RN7SKP27	ENSG00000222616	265663	None	None
L1FLnI_2p24.1x	L1	L1	L1FLnI	chr2	22709266	22717879	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP27	ENSG00000222616	143673	LINC01884	ENSG00000233587	160466	None	None
L1FLnI_2p24.1y	L1	L1	L1FLnI	chr2	22980655	22990668	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP27	ENSG00000222616	118771	AC018467.1	ENSG00000232451	27457	None	None
L1FLnI_2p24.1z	L1	L1	L1FLnI	chr2	23168053	23178197	+	coding	AC018467.1	lncRNA	ANTISENSE	ENSG00000232451	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p24.1aa	L1	L1	L1FLnI	chr2	23224353	23234386	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012506.1	ENSG00000223530	96278	AC018467.1	ENSG00000232451	25297	None	None
L1FLnI_2p24.1ba	L1	L1	L1FLnI	chr2	23733070	23743217	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	KLHL29	ENSG00000119771	24459	ATAD2B	ENSG00000119778	5447	None	None
L1FLnI_2p23.3a	L1	L1	L1FLnI	chr2	24091659	24101758	+	noncoding	FAM228B	protein_coding	SENSE	ENSG00000219626	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chr2:24101459-24101651	None
L1FLnI_2p23.3b	L1	L1	L1FLnI	chr2	24192927	24202140	-	coding	FAM228A,AC008073.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000186453,ENSG00000223754	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p23.3c	L1	L1	L1FLnI	chr2	24530955	24540333	-	coding	NCOA1	protein_coding	ANTISENSE	ENSG00000084676	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p23.3d	L1	L1	L1FLnI	chr2	24799825	24809971	-	coding	CENPO	protein_coding	ANTISENSE	ENSG00000138092	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p23.2a	L1	L1	L1FLnI	chr2	28173098	28182189	+	noncoding	BABAM2	protein_coding	SENSE	ENSG00000158019	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:28178708-28178713
L1FLnI_2p23.2b	L1	L1	L1FLnI	chr2	29675532	29684500	-	noncoding	ALK,RN7SL516P	protein_coding,misc_RNA	SENSE,SENSE	ENSG00000171094,ENSG00000242699	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr2:29678883-29679463	chr2:29679257-29679263,chr2:29679654-29679663,chr2:29679743-29679750,chr2:29680920-29680948
L1FLnI_2p23.1a	L1	L1	L1FLnI	chr2	30056854	30066628	+	noncoding	AC016907.2	lncRNA	ANTISENSE	ENSG00000233862	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p23.1b	L1	L1	L1FLnI	chr2	30811444	30820331	+	coding	CAPN13	protein_coding	ANTISENSE	ENSG00000162949	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p23.1c	L1	L1	L1FLnI	chr2	30900700	30910723	+	coding	GALNT14	protein_coding	ANTISENSE	ENSG00000158089	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p23.1d	L1	L1	L1FLnI	chr2	31304924	31315495	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	XDH	ENSG00000158125	18826	AL121657.1	ENSG00000213620	13320	None	None
L1FLnI_2p23.1e	L1	L1	L1FLnI	chr2	31478854	31490129	-	NA	None	NA	NA	None	INTERGENIC	NA	NA	SRD5A2	ENSG00000277893	32351	XDH	ENSG00000158125	64112	None	None
L1FLnI_2p23.1f	L1	L1	L1FLnI	chr2	31492863	31502950	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	XDH	ENSG00000158125	78121	SRD5A2	ENSG00000277893	19530	None	None
L1FLnI_2p23.1g	L1	L1	L1FLnI	chr2	31623870	31632481	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133247.2	ENSG00000270422	18900	SRD5A2	ENSG00000277893	42932	None	None
L1FLnI_2p23.1h	L1	L1	L1FLnI	chr2	31668611	31680312	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01946	ENSG00000223647	113511	AL133247.2	ENSG00000270422	16749	None	None
L1FLnI_2p23.1i	L1	L1	L1FLnI	chr2	31677600	31687666	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01946	ENSG00000223647	106157	AL133247.2	ENSG00000270422	25738	None	None
L1FLnI_2p23.1j	L1	L1	L1FLnI	chr2	31707901	31716885	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133247.2	ENSG00000270422	56039	LINC01946	ENSG00000223647	76938	None	chr2:31710211-31710226,chr2:31710230-31710242,chr2:31710264-31710283
L1FLnI_2p23.1k	L1	L1	L1FLnI	chr2	31714095	31724343	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133247.2	ENSG00000270422	62233	LINC01946	ENSG00000223647	69480	None	None
L1FLnI_2p23.1l	L1	L1	L1FLnI	chr2	31791839	31801939	+	coding	LINC01946	lncRNA	ANTISENSE	ENSG00000223647	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p23.1m	L1	L1	L1FLnI	chr2	31791839	31801926	+	coding	LINC01946	lncRNA	ANTISENSE	ENSG00000223647	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p22.3a	L1	L1	L1FLnI	chr2	32099969	32110086	-	coding	SPAST	protein_coding	ANTISENSE	ENSG00000021574	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p22.3b	L1	L1	L1FLnI	chr2	33166515	33176665	+	coding	LTBP1	protein_coding	SENSE	ENSG00000049323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p22.3c	L1	L1	L1FLnI	chr2	34462718	34473150	+	noncoding	LINC01320	lncRNA	SENSE	ENSG00000228262	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p22.3d	L1	L1	L1FLnI	chr2	34631813	34641976	+	coding	LINC01320	lncRNA	SENSE	ENSG00000228262	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p22.3e	L1	L1	L1FLnI	chr2	34715039	34723989	-	noncoding	LINC01320	lncRNA	ANTISENSE	ENSG00000228262	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p22.3f	L1	L1	L1FLnI	chr2	34849999	34858801	+	coding	AC012593.1	lncRNA	SENSE	ENSG00000226994	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p22.3g	L1	L1	L1FLnI	chr2	35008949	35019091	+	coding	AC012593.1	lncRNA	SENSE	ENSG00000226994	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p22.3h	L1	L1	L1FLnI	chr2	35063284	35072742	+	noncoding	AC012593.1	lncRNA	SENSE	ENSG00000226994	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p22.3i	L1	L1	L1FLnI	chr2	35106362	35116509	-	coding	AC012593.1	lncRNA	ANTISENSE	ENSG00000226994	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p22.3j	L1	L1	L1FLnI	chr2	35286751	35297219	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548AD	ENSG00000265301	174186	AC013442.2	ENSG00000288535	1754	None	None
L1FLnI_2p22.3k	L1	L1	L1FLnI	chr2	35319259	35329400	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548AD	ENSG00000265301	142005	AC013442.2	ENSG00000288535	34262	None	None
L1FLnI_2p22.3l	L1	L1	L1FLnI	chr2	35474165	35483433	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC083939.1	ENSG00000229013	2324	MRPL50P1	ENSG00000234587	241326	None	None
L1FLnI_2p22.3m	L1	L1	L1FLnI	chr2	35523001	35532458	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPL50P1	ENSG00000234587	192301	AC083939.1	ENSG00000229013	51160	None	None
L1FLnI_2p22.3n	L1	L1	L1FLnI	chr2	35562563	35572705	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPL50P1	ENSG00000234587	152054	AC083939.1	ENSG00000229013	90722	None	None
L1FLnI_2p22.3o	L1	L1	L1FLnI	chr2	35569059	35579709	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MRPL50P1	ENSG00000234587	145050	AC083939.1	ENSG00000229013	97218	None	None
L1FLnI_2p22.3p	L1	L1	L1FLnI	chr2	35730360	35740841	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPL50P1	ENSG00000234587	5218	AC009414.1	ENSG00000233752	558547	None	None
L1FLnI_2p22.3q	L1	L1	L1FLnI	chr2	35753833	35763400	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009414.1	ENSG00000233752	535988	MRPL50P1	ENSG00000234587	28691	None	None
L1FLnI_2p22.3r	L1	L1	L1FLnI	chr2	35754013	35763400	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009414.1	ENSG00000233752	535988	MRPL50P1	ENSG00000234587	28871	None	None
L1FLnI_2p22.3s	L1	L1	L1FLnI	chr2	35888578	35900131	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009414.1	ENSG00000233752	399257	MRPL50P1	ENSG00000234587	163436	None	None
L1FLnI_2p22.3t	L1	L1	L1FLnI	chr2	35888578	35898424	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009414.1	ENSG00000233752	400964	MRPL50P1	ENSG00000234587	163436	None	None
L1FLnI_2p22.3u	L1	L1	L1FLnI	chr2	35900423	35910519	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC009414.1	ENSG00000233752	388869	MRPL50P1	ENSG00000234587	175281	None	None
L1FLnI_2p22.3v	L1	L1	L1FLnI	chr2	36094110	36103640	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MRPL50P1	ENSG00000234587	368968	AC009414.1	ENSG00000233752	195748	None	None
L1FLnI_2p22.3w	L1	L1	L1FLnI	chr2	36112008	36122037	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC009414.1	ENSG00000233752	177351	MRPL50P1	ENSG00000234587	386866	None	None
L1FLnI_2p22.2a	L1	L1	L1FLnI	chr2	36743305	36752211	-	noncoding	VIT	protein_coding	ANTISENSE	ENSG00000205221	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p22.2b	L1	L1	L1FLnI	chr2	37593699	37603827	-	coding	AC006369.1	lncRNA	ANTISENSE	ENSG00000236213	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr2:37600646-37601234	chr2:37599896-37599904,chr2:37599930-37599961,chr2:37599728-37599749
L1FLnI_2p22.2c	L1	L1	L1FLnI	chr2	37719658	37729770	+	coding	CDC42EP3	protein_coding	ANTISENSE	ENSG00000163171	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p22.2d	L1	L1	L1FLnI	chr2	37935404	37945855	-	noncoding	RMDN2	protein_coding	ANTISENSE	ENSG00000115841	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p22.2e	L1	L1	L1FLnI	chr2	37956158	37966656	-	noncoding	RMDN2,RMDN2-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000115841,ENSG00000235848	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p22.2f	L1	L1	L1FLnI	chr2	38004197	38014358	-	coding	RMDN2,RMDN2-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000115841,ENSG00000235848	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p22.2g	L1	L1	L1FLnI	chr2	38131909	38142092	-	coding	CYP1B1-AS1,AC009229.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000232973,ENSG00000229160	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr2:38131744-38131980,chr2:38141448-38142060	chr2:38141656-38141663
L1FLnI_2p22.1a	L1	L1	L1FLnI	chr2	39193408	39202450	+	noncoding	CDKL4	protein_coding	ANTISENSE	ENSG00000205111	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p22.1b	L1	L1	L1FLnI	chr2	39574494	39584652	-	coding	MAP4K3-DT	lncRNA	ANTISENSE	ENSG00000231312	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p22.1c	L1	L1	L1FLnI	chr2	39574520	39584652	-	coding	MAP4K3-DT	lncRNA	ANTISENSE	ENSG00000231312	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p22.1d	L1	L1	L1FLnI	chr2	39807210	39817638	-	noncoding	SLC8A1-AS1	lncRNA	ANTISENSE	ENSG00000227028	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p22.1e	L1	L1	L1FLnI	chr2	39824494	39834937	-	noncoding	SLC8A1-AS1	lncRNA	ANTISENSE	ENSG00000227028	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p22.1f	L1	L1	L1FLnI	chr2	40008100	40018119	-	coding	SLC8A1-AS1	lncRNA	ANTISENSE	ENSG00000227028	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p22.1g	L1	L1	L1FLnI	chr2	40008102	40018119	-	coding	SLC8A1-AS1	lncRNA	ANTISENSE	ENSG00000227028	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p22.1h	L1	L1	L1FLnI	chr2	40080518	40089285	-	coding	SLC8A1-AS1	lncRNA	ANTISENSE	ENSG00000227028	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:40088202-40088252
L1FLnI_2p22.1i	L1	L1	L1FLnI	chr2	40232102	40242127	-	coding	SLC8A1-AS1,SLC8A1	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000227028,ENSG00000183023	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:40239179-40239493	None
L1FLnI_2p22.1j	L1	L1	L1FLnI	chr2	41435379	41446988	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009413.3	ENSG00000287145	269145	HNRNPA1P57	ENSG00000237442	277824	None	None
L1FLnI_2p21a	L1	L1	L1FLnI	chr2	42985977	42996002	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC098824.1	ENSG00000232202	158360	AC016735.1	ENSG00000224739	5353	None	None
L1FLnI_2p21b	L1	L1	L1FLnI	chr2	43542371	43552521	-	coding	THADA	protein_coding	SENSE	ENSG00000115970	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p21c	L1	L1	L1FLnI	chr2	43659973	43670000	-	coding	PLEKHH2	protein_coding	ANTISENSE	ENSG00000152527	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p21d	L1	L1	L1FLnI	chr2	44382994	44392705	-	noncoding	CAMKMT	protein_coding	ANTISENSE	ENSG00000143919	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p21e	L1	L1	L1FLnI	chr2	45059061	45069087	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01121	ENSG00000205054	95729	AC093702.1	ENSG00000231156	45393	None	None
L1FLnI_2p21f	L1	L1	L1FLnI	chr2	45072246	45082276	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093702.1	ENSG00000231156	58578	LINC01121	ENSG00000205054	82540	None	None
L1FLnI_2p21g	L1	L1	L1FLnI	chr2	46211460	46221648	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016696.1	ENSG00000233335	35212	PRKCE	ENSG00000171132	23470	None	None
L1FLnI_2p21h	L1	L1	L1FLnI	chr2	46471560	46481604	-	noncoding	AC016912.1,TMEM247	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000284608,ENSG00000284701	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.3a	L1	L1	L1FLnI	chr2	47970025	47980358	+	coding	AC092650.1	lncRNA	ANTISENSE	ENSG00000230773	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.3b	L1	L1	L1FLnI	chr2	48052384	48061919	-	coding	AC092650.1	lncRNA	SENSE	ENSG00000230773	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.3c	L1	L1	L1FLnI	chr2	48151650	48161849	+	noncoding	AC092650.1	lncRNA	ANTISENSE	ENSG00000230773	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:48157822-48158065	None
L1FLnI_2p16.3d	L1	L1	L1FLnI	chr2	48701766	48711660	-	coding	STON1-GTF2A1L,GTF2A1L,AC073082.1,LHCGR	protein_coding,protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,SENSE,SENSE	ENSG00000068781,ENSG00000242441,ENSG00000279956,ENSG00000138039	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_2p16.3	L1	L1	L1ORF2	chr2	48738827	48746873	+	coding	STON1-GTF2A1L,AC073082.1,LHCGR	protein_coding,protein_coding,protein_coding	SENSE,ANTISENSE,ANTISENSE	ENSG00000068781,ENSG00000279956,ENSG00000138039	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.3e	L1	L1	L1FLnI	chr2	48822854	48831525	+	noncoding	AC009975.1	lncRNA	SENSE	ENSG00000282890	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.3f	L1	L1	L1FLnI	chr2	49180033	49189888	-	noncoding	AC009975.1	lncRNA	ANTISENSE	ENSG00000282890	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.3g	L1	L1	L1FLnI	chr2	49206401	49216437	+	coding	AC009975.1,AC009975.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000282890,ENSG00000282998	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.3h	L1	L1	L1FLnI	chr2	49227088	49237296	-	coding	AC009975.1,AC009975.2,RNU6-439P	lncRNA,lncRNA,snRNA	ANTISENSE,SENSE,SENSE	ENSG00000282890,ENSG00000282998,ENSG00000206915	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.3i	L1	L1	L1FLnI	chr2	49239914	49248826	+	noncoding	AC009975.1,AC009975.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000282890,ENSG00000282998	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.3j	L1	L1	L1FLnI	chr2	49294975	49305054	+	coding	AC009975.1,AC009975.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000282890,ENSG00000282998	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.3k	L1	L1	L1FLnI	chr2	49308683	49318082	+	coding	AC009975.1,AC009975.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000282890,ENSG00000282998	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.3l	L1	L1	L1FLnI	chr2	49308683	49318107	+	coding	AC009975.1,AC009975.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000282890,ENSG00000282998	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.3m	L1	L1	L1FLnI	chr2	49477473	49486982	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC009975.2	ENSG00000282998	25577	AC009971.1	ENSG00000282828	76406	None	None
L1FLnI_2p16.3n	L1	L1	L1FLnI	chr2	49663104	49671666	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P13	ENSG00000234253	206957	AC009971.1	ENSG00000282828	67978	None	None
L1FLnI_2p16.3o	L1	L1	L1FLnI	chr2	49878391	49888848	+	coding	RPL7P13	processed_pseudogene	SENSE	ENSG00000234253	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.3p	L1	L1	L1FLnI	chr2	50354286	50364748	+	coding	NRXN1	protein_coding	ANTISENSE	ENSG00000179915	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.3q	L1	L1	L1FLnI	chr2	51187759	51198545	-	noncoding	NRXN1,AC007402.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000179915,ENSG00000231918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.3r	L1	L1	L1FLnI	chr2	51247502	51258349	+	noncoding	AC007402.1	lncRNA	SENSE	ENSG00000231918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.3s	L1	L1	L1FLnI	chr2	51312223	51322345	-	coding	AC007402.1	lncRNA	ANTISENSE	ENSG00000231918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:51320674-51320702
L1FLnI_2p16.3t	L1	L1	L1FLnI	chr2	51387899	51398136	+	noncoding	AC007402.1	lncRNA	SENSE	ENSG00000231918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.3u	L1	L1	L1FLnI	chr2	51599522	51609750	-	noncoding	AC007402.1	lncRNA	ANTISENSE	ENSG00000231918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.3v	L1	L1	L1FLnI	chr2	51768533	51778705	-	noncoding	AC007402.1,CRYGGP	lncRNA,unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000231918,ENSG00000223710	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.3w	L1	L1	L1FLnI	chr2	51791117	51801346	+	coding	AC007402.1	lncRNA	SENSE	ENSG00000231918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:51797433-51797591	None
L1FLnI_2p16.3x	L1	L1	L1FLnI	chr2	52012645	52022174	-	coding	AC007402.1,AC079304.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000231918,ENSG00000287344	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.3y	L1	L1	L1FLnI	chr2	52038907	52049052	-	coding	AC007402.1	lncRNA	ANTISENSE	ENSG00000231918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.3z	L1	L1	L1FLnI	chr2	52486636	52495974	-	noncoding	AC139712.3	lncRNA	SENSE	ENSG00000236837	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.3aa	L1	L1	L1FLnI	chr2	52573856	52584777	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FTH1P6	ENSG00000233083	44966	AC139712.1	ENSG00000204993	1334	None	None
L1FLnI_2p16.2a	L1	L1	L1FLnI	chr2	52677384	52685937	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FTH1P6	ENSG00000233083	47306	MIR4431	ENSG00000264975	16585	None	None
L1FLnI_2p16.2b	L1	L1	L1FLnI	chr2	52846359	52856087	-	noncoding	AC010967.1	lncRNA	SENSE	ENSG00000228033	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:52851873-52851976	None
L1FLnI_2p16.2c	L1	L1	L1FLnI	chr2	53121219	53131619	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069157.2	ENSG00000251942	338828	AC010967.1	ENSG00000228033	159767	None	None
L1FLnI_2p16.2d	L1	L1	L1FLnI	chr2	53264082	53273962	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010967.1	ENSG00000228033	302630	AC069157.2	ENSG00000251942	196485	None	None
L1FLnI_2p16.2e	L1	L1	L1FLnI	chr2	53417138	53425926	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069157.2	ENSG00000251942	44521	AC010967.1	ENSG00000228033	455686	None	None
L1FLnI_2p16.2f	L1	L1	L1FLnI	chr2	53583535	53593544	+	coding	ASB3	protein_coding	ANTISENSE	ENSG00000115239	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.2g	L1	L1	L1FLnI	chr2	53659525	53668179	+	coding	ASB3	protein_coding	ANTISENSE	ENSG00000115239	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:53667660-53667665,chr2:53667694-53667696
L1FLnI_2p16.1a	L1	L1	L1FLnI	chr2	55438608	55448373	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	BTF3P5	ENSG00000233594	2986	RNU6-775P	ENSG00000238619	2631	None	None
L1FLnI_2p16.1b	L1	L1	L1FLnI	chr2	55458663	55468810	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-221P	ENSG00000238493	2459	RNU6-634P	ENSG00000239189	31140	None	None
L1FLnI_2p16.1c	L1	L1	L1FLnI	chr2	55735831	55745893	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	EFEMP1	ENSG00000115380	120074	PNPT1	ENSG00000138035	41968	None	None
L1FLnI_2p16.1d	L1	L1	L1FLnI	chr2	55735863	55745893	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	EFEMP1	ENSG00000115380	120074	PNPT1	ENSG00000138035	42000	None	None
L1FLnI_2p16.1e	L1	L1	L1FLnI	chr2	55787622	55797761	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	EFEMP1	ENSG00000115380	68206	PNPT1	ENSG00000138035	93759	None	None
L1FLnI_2p16.1f	L1	L1	L1FLnI	chr2	55810694	55820640	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PNPT1	ENSG00000138035	116831	EFEMP1	ENSG00000115380	45327	None	None
L1FLnI_2p16.1g	L1	L1	L1FLnI	chr2	55831045	55841183	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EFEMP1	ENSG00000115380	24784	PNPT1	ENSG00000138035	137182	chr2:55839275-55839473	None
L1FLnI_2p16.1h	L1	L1	L1FLnI	chr2	56059203	56069503	-	noncoding	AC011306.1	lncRNA	ANTISENSE	ENSG00000272180	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.1i	L1	L1	L1FLnI	chr2	56065515	56074313	-	coding	AC011306.1	lncRNA	ANTISENSE	ENSG00000272180	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:56071085-56071289	None
L1FLnI_2p16.1j	L1	L1	L1FLnI	chr2	56089082	56099213	+	coding	AC011306.1,LINC01813	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000272180,ENSG00000229805	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.1k	L1	L1	L1FLnI	chr2	56136652	56146776	-	coding	AC011306.1	lncRNA	ANTISENSE	ENSG00000272180	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.1l	L1	L1	L1FLnI	chr2	56417567	56427707	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC85A	ENSG00000055813	31395	PPIAP63	ENSG00000231570	322593	None	None
L1FLnI_2p16.1m	L1	L1	L1FLnI	chr2	56417567	56427725	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC85A	ENSG00000055813	31395	PPIAP63	ENSG00000231570	322575	None	None
L1FLnI_2p16.1n	L1	L1	L1FLnI	chr2	56551099	56561245	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP63	ENSG00000231570	189055	CCDC85A	ENSG00000055813	164927	None	None
L1FLnI_2p16.1o	L1	L1	L1FLnI	chr2	56630745	56640892	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP63	ENSG00000231570	109408	CCDC85A	ENSG00000055813	244573	None	None
L1FLnI_2p16.1p	L1	L1	L1FLnI	chr2	56814019	56823222	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP63	ENSG00000231570	63456	AC010738.1	ENSG00000271115	225128	None	None
L1FLnI_2p16.1q	L1	L1	L1FLnI	chr2	56966894	56976429	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP63	ENSG00000231570	216331	AC010738.1	ENSG00000271115	71921	None	None
L1FLnI_2p16.1r	L1	L1	L1FLnI	chr2	57097339	57106825	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC132153.1	ENSG00000285755	182823	AC010738.1	ENSG00000271115	48003	None	None
L1FLnI_2p16.1s	L1	L1	L1FLnI	chr2	57270368	57280451	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC132153.1	ENSG00000285755	9197	AC010738.1	ENSG00000271115	221032	None	None
L1FLnI_2p16.1t	L1	L1	L1FLnI	chr2	57415212	57425219	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC132153.1	ENSG00000285755	35080	AC068276.1	ENSG00000270569	4329	None	None
L1ORF2_2p16.1	L1	L1	L1ORF2	chr2	57585404	57593453	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073875.1	ENSG00000212168	40805	ACTG1P22	ENSG00000271615	161975	None	None
L1FLnI_2p16.1u	L1	L1	L1FLnI	chr2	57605349	57615348	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073875.1	ENSG00000212168	60750	ACTG1P22	ENSG00000271615	140080	None	None
L1FLnI_2p16.1v	L1	L1	L1FLnI	chr2	57789102	57798496	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	VRK2	ENSG00000028116	109133	ACTG1P22	ENSG00000271615	23050	None	None
L1FLnI_2p16.1w	L1	L1	L1FLnI	chr2	57922106	57930779	-	noncoding	VRK2	protein_coding	ANTISENSE	ENSG00000028116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.1x	L1	L1	L1FLnI	chr2	58168116	58178288	+	coding	FANCL	protein_coding	ANTISENSE	ENSG00000115392	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.1y	L1	L1	L1FLnI	chr2	58321843	58331774	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01795	ENSG00000225226	25026	LINC01122	ENSG00000233723	96025	None	None
L1FLnI_2p16.1z	L1	L1	L1FLnI	chr2	58321843	58331763	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01795	ENSG00000225226	25026	LINC01122	ENSG00000233723	96036	None	None
L1FLnI_2p16.1aa	L1	L1	L1FLnI	chr2	58381044	58391066	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01122	ENSG00000233723	36733	LINC01795	ENSG00000225226	84227	None	None
L1FLnI_2p16.1ba	L1	L1	L1FLnI	chr2	58685434	58695129	+	coding	LINC01122	lncRNA	SENSE	ENSG00000233723	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.1ca	L1	L1	L1FLnI	chr2	59086252	59096386	-	coding	AC007092.1	lncRNA	ANTISENSE	ENSG00000285673	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.1da	L1	L1	L1FLnI	chr2	59322809	59332940	+	coding	AC007100.1,AC007179.2	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000271955,ENSG00000233891	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.1ea	L1	L1	L1FLnI	chr2	59399542	59408324	+	noncoding	AC007100.1,AC007179.2	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000271955,ENSG00000233891	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.1fa	L1	L1	L1FLnI	chr2	59408196	59418170	-	noncoding	AC007100.1,AC007179.2	lncRNA,lncRNA	SENSE,SENSE	ENSG00000271955,ENSG00000233891	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.1ga	L1	L1	L1FLnI	chr2	60031375	60041256	+	noncoding	AC007100.1	lncRNA	ANTISENSE	ENSG00000271955	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.1ha	L1	L1	L1FLnI	chr2	60080164	60090194	+	coding	AC007100.1	lncRNA	ANTISENSE	ENSG00000271955	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p16.1ia	L1	L1	L1FLnI	chr2	60129678	60139840	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC007381.1	ENSG00000228590	196606	AC007100.1	ENSG00000271955	29478	None	None
L1FLnI_2p16.1ja	L1	L1	L1FLnI	chr2	60137693	60147723	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC007100.1	ENSG00000271955	37493	AC007381.1	ENSG00000228590	188723	None	None
L1FLnI_2p16.1ka	L1	L1	L1FLnI	chr2	60185525	60195553	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC007100.1	ENSG00000271955	85325	AC007381.1	ENSG00000228590	140893	None	None
L1FLnI_2p16.1la	L1	L1	L1FLnI	chr2	60202702	60211270	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC007381.1	ENSG00000228590	125176	AC007100.1	ENSG00000271955	102502	None	None
L1FLnI_2p15a	L1	L1	L1FLnI	chr2	61032501	61041233	+	coding	PEX13	protein_coding	SENSE	ENSG00000162928	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p15b	L1	L1	L1FLnI	chr2	62515022	62525155	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092155.2	ENSG00000229503	7428	TMEM17	ENSG00000186889	3128	None	None
L1FLnI_2p15c	L1	L1	L1FLnI	chr2	62580387	62590486	-	coding	AC092155.1	lncRNA	SENSE	ENSG00000226622	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p15d	L1	L1	L1FLnI	chr2	62601739	62611875	+	coding	AC092155.1	lncRNA	ANTISENSE	ENSG00000226622	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p15e	L1	L1	L1FLnI	chr2	62615920	62626229	-	coding	AC092155.1	lncRNA	SENSE	ENSG00000226622	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p15f	L1	L1	L1FLnI	chr2	62629499	62638025	+	noncoding	AC092155.1	lncRNA	ANTISENSE	ENSG00000226622	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p15g	L1	L1	L1FLnI	chr2	62645212	62655226	-	coding	AC092155.1	lncRNA	SENSE	ENSG00000226622	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:62654335-62654738	None
L1FLnI_2p15h	L1	L1	L1FLnI	chr2	62748487	62758637	-	coding	EHBP1	protein_coding	ANTISENSE	ENSG00000115504	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p15i	L1	L1	L1FLnI	chr2	62831980	62841998	+	coding	EHBP1,AC092567.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000115504,ENSG00000226605	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:62832456-62832460
L1FLnI_2p15j	L1	L1	L1FLnI	chr2	63087177	63095853	-	coding	AC009501.2	processed_pseudogene	ANTISENSE	ENSG00000270437	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p15k	L1	L1	L1FLnI	chr2	63179701	63190386	-	noncoding	AC009501.3,WDPCP	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000286480,ENSG00000143951	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:63188445-63188721	None
L1FLnI_2p15l	L1	L1	L1FLnI	chr2	63206978	63217221	+	coding	WDPCP	protein_coding	ANTISENSE	ENSG00000143951	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p15m	L1	L1	L1FLnI	chr2	63266985	63276298	+	coding	WDPCP	protein_coding	ANTISENSE	ENSG00000143951	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p15n	L1	L1	L1FLnI	chr2	63384731	63394042	+	noncoding	WDPCP	protein_coding	ANTISENSE	ENSG00000143951	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:63386826-63386832	None
L1FLnI_2p15o	L1	L1	L1FLnI	chr2	63404580	63414015	+	noncoding	WDPCP	protein_coding	ANTISENSE	ENSG00000143951	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr2:63406163-63406169	None
L1FLnI_2p15p	L1	L1	L1FLnI	chr2	63527225	63537124	+	noncoding	WDPCP	protein_coding	ANTISENSE	ENSG00000143951	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p14a	L1	L1	L1FLnI	chr2	63923018	63933165	+	coding	VPS54	protein_coding	ANTISENSE	ENSG00000143952	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p14b	L1	L1	L1FLnI	chr2	64887528	64897591	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01800	ENSG00000234572	23902	LINC02245	ENSG00000237638	4249	None	None
L1FLnI_2p14c	L1	L1	L1FLnI	chr2	64887528	64897575	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01800	ENSG00000234572	23902	LINC02245	ENSG00000237638	4265	None	None
L1FLnI_2p14d	L1	L1	L1FLnI	chr2	65923693	65933843	-	coding	AC007389.1	lncRNA	ANTISENSE	ENSG00000204929	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p14e	L1	L1	L1FLnI	chr2	65962563	65972714	-	coding	AC007389.1	lncRNA	ANTISENSE	ENSG00000204929	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p14f	L1	L1	L1FLnI	chr2	66081913	66091083	+	noncoding	AC007389.1	lncRNA	SENSE	ENSG00000204929	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:66088889-66088893
L1FLnI_2p14g	L1	L1	L1FLnI	chr2	66138451	66148439	-	coding	AC007389.1	lncRNA	ANTISENSE	ENSG00000204929	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p14h	L1	L1	L1FLnI	chr2	66173672	66183702	+	coding	AC007389.1	lncRNA	SENSE	ENSG00000204929	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p14i	L1	L1	L1FLnI	chr2	66202831	66212869	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC007389.1	ENSG00000204929	2458	AC118345.1	ENSG00000227293	22508	None	None
L1FLnI_2p14j	L1	L1	L1FLnI	chr2	66346386	66356526	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4778	ENSG00000264525	1723	AC092669.1	ENSG00000225815	17402	None	None
L1FLnI_2p14k	L1	L1	L1FLnI	chr2	66387632	66397650	+	coding	LINC01873	lncRNA	SENSE	ENSG00000232164	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr2:66389721-66390122	chr2:66390051-66390068
L1FLnI_2p14l	L1	L1	L1FLnI	chr2	66609147	66619264	-	noncoding	LINC01798	lncRNA	ANTISENSE	ENSG00000232046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p14m	L1	L1	L1FLnI	chr2	66620899	66629933	-	noncoding	LINC01798	lncRNA	ANTISENSE	ENSG00000232046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p14n	L1	L1	L1FLnI	chr2	66626590	66636735	-	coding	LINC01798	lncRNA	ANTISENSE	ENSG00000232046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p14o	L1	L1	L1FLnI	chr2	66642150	66652243	-	noncoding	LINC01798	lncRNA	ANTISENSE	ENSG00000232046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p14p	L1	L1	L1FLnI	chr2	66656213	66666075	-	noncoding	LINC01798	lncRNA	ANTISENSE	ENSG00000232046	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p14q	L1	L1	L1FLnI	chr2	67014931	67024381	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01799	ENSG00000230525	43469	AC007403.1	ENSG00000223859	16165	None	None
L1FLnI_2p14r	L1	L1	L1FLnI	chr2	67189313	67199467	-	coding	LINC01828,LINC01829	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000235885,ENSG00000236780	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p14s	L1	L1	L1FLnI	chr2	67352566	67362762	+	coding	LINC01829	lncRNA	ANTISENSE	ENSG00000236780	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p14t	L1	L1	L1FLnI	chr2	67352566	67362791	+	coding	LINC01829	lncRNA	ANTISENSE	ENSG00000236780	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p14u	L1	L1	L1FLnI	chr2	67585436	67595546	+	noncoding	LINC02831,AC007422.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000224173,ENSG00000235495	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p14v	L1	L1	L1FLnI	chr2	67738472	67748583	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01812	ENSG00000237013	47471	AC007422.1	ENSG00000235495	54395	None	None
L1FLnI_2p14w	L1	L1	L1FLnI	chr2	68060292	68070396	+	noncoding	C1D	protein_coding	ANTISENSE	ENSG00000197223	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:68062974-68063014
L1FLnI_2p14x	L1	L1	L1FLnI	chr2	68397236	68407506	-	noncoding	PLEK	protein_coding	ANTISENSE	ENSG00000115956	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr2:68404255-68404414	None
L1FLnI_2p13.3a	L1	L1	L1FLnI	chr2	68401410	68411839	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PLEK	ENSG00000115956	3957	AC127383.1	ENSG00000229462	33871	chr2:68404255-68404414	None
L1FLnI_2p13.3b	L1	L1	L1FLnI	chr2	68613150	68622413	-	coding	APLF	protein_coding	ANTISENSE	ENSG00000169621	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p13.3c	L1	L1	L1FLnI	chr2	68752493	68762909	+	noncoding	ARHGAP25	protein_coding	SENSE	ENSG00000163219	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr2:68762682-68763109	None
L1FLnI_2p13.3d	L1	L1	L1FLnI	chr2	70838700	70848820	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CD207	ENSG00000116031	2884	LINC01143	ENSG00000237751	39051	None	None
L1FLnI_2p13.3e	L1	L1	L1FLnI	chr2	70872415	70882584	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CD207	ENSG00000116031	36599	LINC01143	ENSG00000237751	5287	None	None
L1FLnI_2p13.3f	L1	L1	L1FLnI	chr2	71245314	71255056	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF638	ENSG00000075292	21505	PAIP2B	ENSG00000124374	18211	None	None
L1FLnI_2p13.2a	L1	L1	L1FLnI	chr2	71410976	71421001	-	coding	ZNF638	protein_coding	ANTISENSE	ENSG00000075292	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:71417673-71417678,chr2:71420002-71420006
L1FLnI_2p13.2b	L1	L1	L1FLnI	chr2	72015451	72025460	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CYP26B1	ENSG00000003137	103778	RPS20P10	ENSG00000233971	31017	None	None
L1FLnI_2p13.2c	L1	L1	L1FLnI	chr2	72060477	72070497	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS20P10	ENSG00000233971	76043	CYP26B1	ENSG00000003137	58741	None	None
L1FLnI_2p13.2d	L1	L1	L1FLnI	chr2	72278379	72287332	+	noncoding	EXOC6B	protein_coding	ANTISENSE	ENSG00000144036	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p13.2e	L1	L1	L1FLnI	chr2	72400232	72410369	+	coding	EXOC6B	protein_coding	ANTISENSE	ENSG00000144036	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p13.2f	L1	L1	L1FLnI	chr2	72431799	72441160	-	noncoding	EXOC6B	protein_coding	SENSE	ENSG00000144036	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p13.2g	L1	L1	L1FLnI	chr2	72471103	72479970	-	coding	EXOC6B	protein_coding	SENSE	ENSG00000144036	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:72475797-72476031	None
L1FLnI_2p13.2h	L1	L1	L1FLnI	chr2	72640341	72649092	+	coding	EXOC6B	protein_coding	ANTISENSE	ENSG00000144036	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p13.1a	L1	L1	L1FLnI	chr2	73456956	73467151	+	coding	ALMS1,ALMS1-IT1	protein_coding,lncRNA	SENSE,SENSE	ENSG00000116127,ENSG00000230002	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p13.1b	L1	L1	L1FLnI	chr2	73479578	73489599	-	coding	ALMS1	protein_coding	ANTISENSE	ENSG00000116127	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p13.1c	L1	L1	L1FLnI	chr2	73534902	73545025	+	coding	ALMS1	protein_coding	SENSE	ENSG00000116127	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p13.1d	L1	L1	L1FLnI	chr2	73664002	73674130	-	coding	ALMS1P1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000163016	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p13.1e	L1	L1	L1FLnI	chr2	73717897	73728035	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NAT8B	ENSG00000204872	16557	TPRKB	ENSG00000144034	1069	None	None
L1FLnI_2p13.1f	L1	L1	L1FLnI	chr2	73717897	73728049	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NAT8B	ENSG00000204872	16557	TPRKB	ENSG00000144034	1055	None	None
L1FLnI_2p12a	L1	L1	L1FLnI	chr2	75368398	75378535	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP57	ENSG00000236167	77459	TACR1	ENSG00000115353	168878	None	None
L1FLnI_2p12b	L1	L1	L1FLnI	chr2	75577834	75587167	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EVA1A	ENSG00000115363	8112	AC005034.2	ENSG00000230477	10904	None	None
L1FLnI_2p12c	L1	L1	L1FLnI	chr2	75820162	75828997	+	noncoding	AC110614.1	lncRNA	SENSE	ENSG00000287474	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p12d	L1	L1	L1FLnI	chr2	75830439	75840662	+	noncoding	AC110614.1	lncRNA	SENSE	ENSG00000287474	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p12e	L1	L1	L1FLnI	chr2	76090150	76100285	-	coding	AC110614.1	lncRNA	ANTISENSE	ENSG00000287474	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p12f	L1	L1	L1FLnI	chr2	76344654	76354828	-	coding	AC073091.3	lncRNA	ANTISENSE	ENSG00000287172	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p12g	L1	L1	L1FLnI	chr2	76619480	76629185	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068616.2	ENSG00000287026	4180	RN7SKP164	ENSG00000251947	23802	None	chr2:76627239-76627242
L1FLnI_2p12h	L1	L1	L1FLnI	chr2	76647493	76657520	-	coding	AC068616.2	lncRNA	SENSE	ENSG00000287026	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p12i	L1	L1	L1FLnI	chr2	76653627	76663706	-	noncoding	AC068616.2	lncRNA	SENSE	ENSG00000287026	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:76661966-76661971
L1FLnI_2p12j	L1	L1	L1FLnI	chr2	76701594	76711615	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LRRTM4	ENSG00000176204	36104	AC068616.3	ENSG00000287130	2598	None	None
L1FLnI_2p12k	L1	L1	L1FLnI	chr2	76722336	76732533	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LRRTM4	ENSG00000176204	15186	AC068616.3	ENSG00000287130	23340	None	None
L1ORF2_2p12	L1	L1	L1ORF2	chr2	76774744	76782782	-	coding	LRRTM4	protein_coding	SENSE	ENSG00000176204	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p12l	L1	L1	L1FLnI	chr2	76901475	76911009	+	coding	LRRTM4	protein_coding	ANTISENSE	ENSG00000176204	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p12m	L1	L1	L1FLnI	chr2	77132614	77142125	+	coding	LRRTM4	protein_coding	ANTISENSE	ENSG00000176204	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p12n	L1	L1	L1FLnI	chr2	77158409	77168463	+	coding	LRRTM4	protein_coding	ANTISENSE	ENSG00000176204	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p12o	L1	L1	L1FLnI	chr2	77216271	77225873	+	coding	LRRTM4,AC013716.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000176204,ENSG00000286932	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p12p	L1	L1	L1FLnI	chr2	77589333	77599345	+	coding	LRRTM4	protein_coding	ANTISENSE	ENSG00000176204	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p12q	L1	L1	L1FLnI	chr2	77608165	77618234	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LRRTM4	ENSG00000176204	14846	AC012494.1	ENSG00000227088	33791	None	None
L1FLnI_2p12r	L1	L1	L1FLnI	chr2	77638012	77647207	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012494.1	ENSG00000227088	4818	LRRTM4	ENSG00000176204	44693	None	None
L1FLnI_2p12s	L1	L1	L1FLnI	chr2	77750274	77760278	+	coding	AC012494.1	lncRNA	ANTISENSE	ENSG00000227088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p12t	L1	L1	L1FLnI	chr2	78200435	78209122	+	noncoding	AC012494.1	lncRNA	ANTISENSE	ENSG00000227088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:78202030-78202036
L1FLnI_2p12u	L1	L1	L1FLnI	chr2	78206993	78217954	+	noncoding	AC012494.1	lncRNA	ANTISENSE	ENSG00000227088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p12v	L1	L1	L1FLnI	chr2	78209407	78217954	+	noncoding	AC012494.1	lncRNA	ANTISENSE	ENSG00000227088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p12w	L1	L1	L1FLnI	chr2	78387726	78396496	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYCSP6	ENSG00000214429	16297	AC012494.1	ENSG00000227088	97257	chr2:78390753-78390998	None
L1FLnI_2p12x	L1	L1	L1FLnI	chr2	78651034	78661412	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092660.1	ENSG00000234877	51628	AC092604.1	ENSG00000286260	219301	None	None
L1FLnI_2p12y	L1	L1	L1FLnI	chr2	78652290	78661412	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092660.1	ENSG00000234877	52884	AC092604.1	ENSG00000286260	219301	None	None
L1FLnI_2p12z	L1	L1	L1FLnI	chr2	79077241	79087022	-	noncoding	REG1B	protein_coding	SENSE	ENSG00000172023	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr2:79086903-79086933
L1FLnI_2p12aa	L1	L1	L1FLnI	chr2	79105195	79115196	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	REG1A	ENSG00000115386	5166	REG1B	ENSG00000172023	17176	None	None
L1FLnI_2p12ba	L1	L1	L1FLnI	chr2	79148604	79158180	-	coding	REG3A	protein_coding	SENSE	ENSG00000172016	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr2:79157126-79157144,chr2:79157277-79157282,chr2:79157615-79157634
L1FLnI_2p12ca	L1	L1	L1FLnI	chr2	79231037	79239643	-	noncoding	CTNNA2	protein_coding	ANTISENSE	ENSG00000066032	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p12da	L1	L1	L1FLnI	chr2	79281758	79291771	-	coding	CTNNA2,AC011754.2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000066032,ENSG00000286227	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p12ea	L1	L1	L1FLnI	chr2	80092503	80102654	-	coding	CTNNA2	protein_coding	ANTISENSE	ENSG00000066032	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p12fa	L1	L1	L1FLnI	chr2	80209715	80219878	-	coding	CTNNA2	protein_coding	ANTISENSE	ENSG00000066032	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p12ga	L1	L1	L1FLnI	chr2	80723015	80731742	+	noncoding	AC012355.1	lncRNA	ANTISENSE	ENSG00000230975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p12ha	L1	L1	L1FLnI	chr2	80732928	80742176	+	noncoding	AC012355.1	lncRNA	ANTISENSE	ENSG00000230975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p12ia	L1	L1	L1FLnI	chr2	80811296	80821522	+	noncoding	AC012355.1	lncRNA	ANTISENSE	ENSG00000230975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p12ja	L1	L1	L1FLnI	chr2	80811747	80821522	+	noncoding	AC012355.1	lncRNA	ANTISENSE	ENSG00000230975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p12ka	L1	L1	L1FLnI	chr2	80964234	80973682	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC012355.1	ENSG00000230975	94044	AC105342.1	ENSG00000234429	220655	None	None
L1FLnI_2p12la	L1	L1	L1FLnI	chr2	81019491	81030105	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105342.1	ENSG00000234429	164232	AC012355.1	ENSG00000230975	149301	None	None
L1FLnI_2p12ma	L1	L1	L1FLnI	chr2	81027146	81038208	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105342.1	ENSG00000234429	156129	AC012355.1	ENSG00000230975	156956	None	None
L1FLnI_2p12na	L1	L1	L1FLnI	chr2	81027146	81036894	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105342.1	ENSG00000234429	157443	AC012355.1	ENSG00000230975	156956	None	None
L1FLnI_2p12oa	L1	L1	L1FLnI	chr2	81053979	81065145	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105342.1	ENSG00000234429	129192	AC012355.1	ENSG00000230975	183789	None	None
L1FLnI_2p12pa	L1	L1	L1FLnI	chr2	81286387	81295536	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012075.1	ENSG00000231722	123187	AC105342.1	ENSG00000234429	85203	None	None
L1FLnI_2p12qa	L1	L1	L1FLnI	chr2	81356469	81366600	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012075.1	ENSG00000231722	52123	AC105342.1	ENSG00000234429	155285	None	None
L1FLnI_2p12ra	L1	L1	L1FLnI	chr2	81752572	81761423	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC013262.1	ENSG00000233444	85844	RN7SL201P	ENSG00000242118	205656	None	None
L1FLnI_2p12sa	L1	L1	L1FLnI	chr2	81837294	81846567	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC013262.1	ENSG00000233444	170566	RN7SL201P	ENSG00000242118	120512	None	None
L1FLnI_2p12ta	L1	L1	L1FLnI	chr2	81916125	81924991	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL201P	ENSG00000242118	42088	AC013262.1	ENSG00000233444	249397	None	None
L1FLnI_2p12ua	L1	L1	L1FLnI	chr2	81945399	81955158	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL201P	ENSG00000242118	11921	AC013262.1	ENSG00000233444	278671	None	None
L1FLnI_2p12va	L1	L1	L1FLnI	chr2	82208522	82218482	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LYARP1	ENSG00000229560	49945	AC079896.1	ENSG00000231781	202822	None	None
L1FLnI_2p12wa	L1	L1	L1FLnI	chr2	82208911	82218482	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LYARP1	ENSG00000229560	49945	AC079896.1	ENSG00000231781	203211	None	None
L1FLnI_2p12xa	L1	L1	L1FLnI	chr2	82250695	82261313	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LYARP1	ENSG00000229560	7114	AC079896.1	ENSG00000231781	244995	None	None
L1FLnI_2p12ya	L1	L1	L1FLnI	chr2	82637880	82647132	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC109638.1	ENSG00000226860	27903	MTND4P25	ENSG00000226700	167852	None	None
L1FLnI_2p12za	L1	L1	L1FLnI	chr2	82767490	82777222	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC109638.1	ENSG00000226860	157513	MTND4P25	ENSG00000226700	37762	None	None
L1FLnI_2p12ab	L1	L1	L1FLnI	chr2	82798949	82807673	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC109638.1	ENSG00000226860	188972	MTND4P25	ENSG00000226700	7311	None	None
L1FLnI_2p12bb	L1	L1	L1FLnI	chr2	82871803	82882398	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC098817.1	ENSG00000286211	5295	AC138623.1	ENSG00000223977	336492	None	None
L1FLnI_2p12cb	L1	L1	L1FLnI	chr2	83002048	83010925	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138623.1	ENSG00000223977	207965	AC098817.1	ENSG00000286211	135540	None	None
L1FLnI_2p12db	L1	L1	L1FLnI	chr2	83085306	83095331	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC098817.1	ENSG00000286211	218798	AC138623.1	ENSG00000223977	123559	None	None
L1FLnI_2p11.2a	L1	L1	L1FLnI	chr2	83343976	83353989	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC138623.1	ENSG00000223977	124871	LINC01809	ENSG00000232548	168825	None	None
L1FLnI_2p11.2b	L1	L1	L1FLnI	chr2	83413488	83423423	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138623.1	ENSG00000223977	194383	LINC01809	ENSG00000232548	99391	None	None
L1FLnI_2p11.2c	L1	L1	L1FLnI	chr2	83413488	83422419	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138623.1	ENSG00000223977	194383	LINC01809	ENSG00000232548	100395	None	None
L1FLnI_2p11.2d	L1	L1	L1FLnI	chr2	83764804	83774832	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1312P	ENSG00000199295	106962	AC016908.1	ENSG00000228225	256308	None	None
L1FLnI_2p11.2e	L1	L1	L1FLnI	chr2	83972902	83983044	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1312P	ENSG00000199295	315060	AC016908.1	ENSG00000228225	48096	None	None
L1FLnI_2p11.2f	L1	L1	L1FLnI	chr2	84101159	84110692	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ST6GALNAC2P1	ENSG00000228902	60439	FUNDC2P2	ENSG00000182814	179991	None	None
L1FLnI_2p11.2g	L1	L1	L1FLnI	chr2	84101159	84110702	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ST6GALNAC2P1	ENSG00000228902	60439	FUNDC2P2	ENSG00000182814	179981	None	None
L1FLnI_2p11.2h	L1	L1	L1FLnI	chr2	84221240	84231410	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ST6GALNAC2P1	ENSG00000228902	180520	FUNDC2P2	ENSG00000182814	59273	None	None
L1FLnI_2p11.2i	L1	L1	L1FLnI	chr2	84258881	84269003	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ST6GALNAC2P1	ENSG00000228902	218161	FUNDC2P2	ENSG00000182814	21680	None	None
L1FLnI_2p11.2j	L1	L1	L1FLnI	chr2	84258881	84269022	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ST6GALNAC2P1	ENSG00000228902	218161	FUNDC2P2	ENSG00000182814	21661	None	None
L1FLnI_2p11.2k	L1	L1	L1FLnI	chr2	84350147	84360468	+	noncoding	AC106874.1	lncRNA	SENSE	ENSG00000228272	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p11.2l	L1	L1	L1FLnI	chr2	84498414	84508203	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DNAH6	ENSG00000115423	8252	SUCLG1	ENSG00000163541	38369	None	None
L1FLnI_2p11.2m	L1	L1	L1FLnI	chr2	84505060	84515200	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DNAH6	ENSG00000115423	1255	SUCLG1	ENSG00000163541	45015	None	None
L1FLnI_2p11.2n	L1	L1	L1FLnI	chr2	84658651	84668751	+	coding	DNAH6	protein_coding	SENSE	ENSG00000115423	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p11.2o	L1	L1	L1FLnI	chr2	84734393	84743791	-	coding	DNAH6	protein_coding	ANTISENSE	ENSG00000115423	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p11.2p	L1	L1	L1FLnI	chr2	85960308	85970450	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC012511.2	ENSG00000287628	22760	POLR1A	ENSG00000068654	49766	None	None
L1FLI_2p11.2	L1	L1	L1FLI	chr2	86654223	86662271	-	coding	RNF103-CHMP3	protein_coding	SENSE	ENSG00000249884	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p11.2q	L1	L1	L1FLnI	chr2	90349840	90359984	-	coding	AC233263.1	processed_pseudogene	SENSE	ENSG00000265897	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p11.2r	L1	L1	L1FLnI	chr2	90349850	90359984	-	coding	AC233263.1	processed_pseudogene	SENSE	ENSG00000265897	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p11.2s	L1	L1	L1FLnI	chr2	91443449	91453583	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC233263.6	ENSG00000281904	1075750	AC233266.1	ENSG00000230964	124895	None	None
L1FLnI_2p11.2t	L1	L1	L1FLnI	chr2	91443449	91453571	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC233263.6	ENSG00000281904	1075750	AC233266.1	ENSG00000230964	124907	None	None
L1FLnI_2p11.1a	L1	L1	L1FLnI	chr2	91897860	91907984	+	coding	SLC9B1P2	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000214329	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2p11.1b	L1	L1	L1FLnI	chr2	91917675	91927704	+	coding	SLC9B1P2	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000214329	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q11.1a	L1	L1	L1FLnI	chr2	94612835	94622773	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CNN2P11	ENSG00000237383	102901	AL845331.2	ENSG00000259916	8262	chr2:94621906-94622182	None
L1FLnI_2q11.1b	L1	L1	L1FLnI	chr2	95089245	95099352	+	coding	MRPS5	protein_coding	ANTISENSE	ENSG00000144029	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr2:95098893-95098939	None
L1FLnI_2q11.1c	L1	L1	L1FLnI	chr2	95251588	95261710	-	coding	AC092835.1	protein_coding	ANTISENSE	ENSG00000233757	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr2:95260101-95260123	None
L1FLnI_2q11.1d	L1	L1	L1FLnI	chr2	95774978	95785119	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008268.1	ENSG00000235584	106251	GPAT2P1	ENSG00000237510	4535	None	None
L1FLnI_2q11.1e	L1	L1	L1FLnI	chr2	95866031	95876190	+	coding	ANKRD36C	protein_coding	ANTISENSE	ENSG00000174501	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q11.2a	L1	L1	L1FLnI	chr2	96039463	96049604	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADRA2B	ENSG00000274286	63272	GPAT2	ENSG00000186281	12	None	None
L1FLnI_2q11.2b	L1	L1	L1FLnI	chr2	96375483	96385631	+	coding	NCAPH	protein_coding	SENSE	ENSG00000121152	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q11.2c	L1	L1	L1FLnI	chr2	96437670	96447105	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NCAPH	ENSG00000121152	60579	NEURL3	ENSG00000163121	50541	None	chr2:96437741-96437745
L1FLnI_2q11.2d	L1	L1	L1FLnI	chr2	96450936	96461285	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NCAPH	ENSG00000121152	73845	NEURL3	ENSG00000163121	36361	None	None
L1FLnI_2q11.2e	L1	L1	L1FLnI	chr2	97225129	97235279	-	coding	ANKRD36	protein_coding	ANTISENSE	ENSG00000135976	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q11.2f	L1	L1	L1FLnI	chr2	97521922	97532066	+	coding	ANKRD36B,AC017099.1	protein_coding,processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000196912,ENSG00000235833	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q11.2g	L1	L1	L1FLnI	chr2	97595537	97605698	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC017099.2	ENSG00000286036	12940	ANKRD36B	ENSG00000196912	5572	None	None
L1FLnI_2q11.2h	L1	L1	L1FLnI	chr2	97868972	97879356	+	noncoding	TMEM131	protein_coding	ANTISENSE	ENSG00000075568	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:97869367-97869673	None
L1FLnI_2q11.2i	L1	L1	L1FLnI	chr2	98962669	98971214	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TSGA10	ENSG00000135951	26047	KIAA1211L	ENSG00000196872	26410	None	None
L1FLnI_2q11.2j	L1	L1	L1FLnI	chr2	98974337	98984513	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	KIAA1211L	ENSG00000196872	38078	TSGA10	ENSG00000135951	12748	None	None
L1FLnI_2q11.2k	L1	L1	L1FLnI	chr2	99041737	99050244	+	coding	TSGA10	protein_coding	ANTISENSE	ENSG00000135951	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q11.2l	L1	L1	L1FLnI	chr2	99085377	99095904	+	coding	TSGA10	protein_coding	ANTISENSE	ENSG00000135951	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q11.2m	L1	L1	L1FLnI	chr2	99129271	99138882	-	noncoding	TSGA10	protein_coding	SENSE	ENSG00000135951	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q11.2n	L1	L1	L1FLnI	chr2	100151109	100161297	-	coding	AFF3	protein_coding	SENSE	ENSG00000144218	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q11.2o	L1	L1	L1FLnI	chr2	101312426	101321966	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR5696	ENSG00000264857	2892	CREG2	ENSG00000175874	23584	None	None
L1FLnI_2q11.2p	L1	L1	L1FLnI	chr2	101454813	101463884	-	coding	RFX8	protein_coding	SENSE	ENSG00000196460	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:101463853-101464161	chr2:101463853-101463864,chr2:101463874-101463891
L1FLnI_2q11.2q	L1	L1	L1FLnI	chr2	101931883	101941119	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAP4K4	ENSG00000071054	37194	LINC01127	ENSG00000281162	20937	None	None
L1FLnI_2q12.1a	L1	L1	L1FLnI	chr2	102201965	102211817	-	noncoding	IL1RL2	protein_coding	ANTISENSE	ENSG00000115598	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:102209518-102209846	None
L1FLnI_2q12.1b	L1	L1	L1FLnI	chr2	102320873	102331001	+	coding	IL1RL1,IL18R1	protein_coding,protein_coding	SENSE,SENSE	ENSG00000115602,ENSG00000115604	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:102324026-102324029
L1FLnI_2q12.1c	L1	L1	L1FLnI	chr2	102426172	102435816	-	noncoding	IL18RAP,MIR4772,AC007278.2	protein_coding,miRNA,lncRNA	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000115607,ENSG00000264764,ENSG00000236525	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:102426629-102426640,chr2:102427995-102428005
L1FLI_2q12.1	L1	L1	L1FLI	chr2	102565342	102573387	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC9A2	ENSG00000115616	46166	SLC9A4	ENSG00000180251	31370	None	None
L1FLnI_2q12.1d	L1	L1	L1FLnI	chr2	102640554	102650997	+	noncoding	SLC9A2	protein_coding	SENSE	ENSG00000115616	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q12.1e	L1	L1	L1FLnI	chr2	102873522	102883674	-	coding	TMEM182,LINC01796	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000170417,ENSG00000277527	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q12.1f	L1	L1	L1FLnI	chr2	103088529	103097428	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073987.1	ENSG00000229209	12331	TMEM182	ENSG00000170417	68629	None	None
L1FLnI_2q12.1g	L1	L1	L1FLnI	chr2	103197067	103207194	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073987.1	ENSG00000229209	20807	AC010881.1	ENSG00000227623	68710	None	None
L1FLnI_2q12.1h	L1	L1	L1FLnI	chr2	103470176	103479744	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092568.1	ENSG00000236596	14497	AC011593.1	ENSG00000286290	66464	None	None
L1FLnI_2q12.1i	L1	L1	L1FLnI	chr2	103551280	103561115	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018880.2	ENSG00000231723	62515	AC018880.1	ENSG00000221849	22019	None	chr2:103555905-103555906
L1FLnI_2q12.1j	L1	L1	L1FLnI	chr2	103617466	103627506	+	noncoding	AC018880.2	processed_pseudogene	SENSE	ENSG00000231723	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:103623609-103623620
L1FLnI_2q12.1k	L1	L1	L1FLnI	chr2	103714109	103722744	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018880.2	ENSG00000231723	90279	AC013727.1	ENSG00000232597	133085	None	None
L1FLnI_2q12.1l	L1	L1	L1FLnI	chr2	103824748	103835449	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC013727.1	ENSG00000232597	20380	AC018880.2	ENSG00000231723	200918	None	None
L1FLnI_2q12.1m	L1	L1	L1FLnI	chr2	103826493	103835449	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC013727.1	ENSG00000232597	20380	AC018880.2	ENSG00000231723	202663	None	None
L1FLnI_2q12.1n	L1	L1	L1FLnI	chr2	104250806	104260448	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096554.1	ENSG00000228968	103577	AHCYP3	ENSG00000233955	134554	None	None
L1FLnI_2q12.1o	L1	L1	L1FLnI	chr2	104623262	104633675	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC068057.4	ENSG00000288565	22460	AC013402.3	ENSG00000236109	1495	None	None
L1FLnI_2q12.1p	L1	L1	L1FLnI	chr2	104953108	104963255	-	noncoding	MRPS9-AS2	lncRNA	SENSE	ENSG00000224509	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q12.2a	L1	L1	L1FLnI	chr2	105896597	105905172	-	noncoding	AC009505.1	lncRNA	SENSE	ENSG00000234162	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q12.2b	L1	L1	L1FLnI	chr2	106127394	106137425	+	coding	UXS1	protein_coding	ANTISENSE	ENSG00000115652	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chr2:106130464-106130695	None
L1FLnI_2q12.3a	L1	L1	L1FLnI	chr2	106813150	106823265	+	coding	ST6GAL2,ST6GAL2-IT1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000144057,ENSG00000238250	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q12.3b	L1	L1	L1FLnI	chr2	107032352	107043669	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005040.2	ENSG00000286218	35818	LINC01789	ENSG00000229457	211022	chr2:107035785-107036019	None
L1FLnI_2q12.3c	L1	L1	L1FLnI	chr2	107138778	107148892	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01789	ENSG00000229457	105799	AC005040.2	ENSG00000286218	142244	None	None
L1FLnI_2q12.3d	L1	L1	L1FLnI	chr2	107293320	107303470	-	coding	LINC01789	lncRNA	SENSE	ENSG00000229457	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q12.3e	L1	L1	L1FLnI	chr2	108202645	108212767	-	coding	LINC01594	lncRNA	SENSE	ENSG00000225328	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q12.3f	L1	L1	L1FLnI	chr2	108340139	108349185	-	noncoding	SULT1C2P1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000237223	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q12.3g	L1	L1	L1FLnI	chr2	108425645	108434868	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SMIM12P1	ENSG00000271284	1760	GCC2	ENSG00000135968	14323	None	None
L1FLnI_2q13a	L1	L1	L1FLnI	chr2	109111133	109121285	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC133109.1	ENSG00000277628	3072	EDAR	ENSG00000135960	121761	None	None
L1FLnI_2q13b	L1	L1	L1FLnI	chr2	109949458	109959593	+	noncoding	AC013271.1,AC013268.1,AC013268.5	protein_coding,transcribed_unprocessed_pseudogene,lncRNA	SENSE,SENSE,SENSE	ENSG00000284337,ENSG00000186148,ENSG00000283684	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q13c	L1	L1	L1FLnI	chr2	110103770	110113655	+	noncoding	MALL	protein_coding	ANTISENSE	ENSG00000144063	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:110105959-110106351	None
L1FLnI_2q13d	L1	L1	L1FLnI	chr2	110103770	110113371	+	noncoding	MALL	protein_coding	ANTISENSE	ENSG00000144063	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:110105959-110106351	None
L1FLnI_2q13e	L1	L1	L1FLnI	chr2	110187531	110197429	+	noncoding	NPHP1	protein_coding	ANTISENSE	ENSG00000144061	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q13f	L1	L1	L1FLnI	chr2	110247423	110257559	+	coding	AC140479.4,AC140479.5	transcribed_unprocessed_pseudogene,lncRNA	SENSE,SENSE	ENSG00000261760,ENSG00000282304	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q13g	L1	L1	L1FLnI	chr2	110411897	110422032	-	coding	AC112229.4,AC112229.1,AC112229.3	lncRNA,transcribed_unprocessed_pseudogene,protein_coding	SENSE,SENSE,SENSE	ENSG00000273471,ENSG00000184115,ENSG00000257207	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q13h	L1	L1	L1FLnI	chr2	111056024	111064556	+	noncoding	ACOXL,MIR4435-2HG	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000153093,ENSG00000172965	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.1a	L1	L1	L1FLnI	chr2	112503314	112513345	-	coding	TTL	protein_coding	ANTISENSE	ENSG00000114999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.1b	L1	L1	L1FLnI	chr2	113470983	113481045	-	coding	CBWD2	protein_coding	ANTISENSE	ENSG00000136682	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.1c	L1	L1	L1FLnI	chr2	114012453	114022626	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC010982.3	ENSG00000286513	92053	LINC01191	ENSG00000234199	5149	None	None
L1FLnI_2q14.1d	L1	L1	L1FLnI	chr2	114012476	114022626	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC010982.3	ENSG00000286513	92053	LINC01191	ENSG00000234199	5172	None	None
L1FLnI_2q14.1e	L1	L1	L1FLnI	chr2	114095800	114105905	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC010982.3	ENSG00000286513	8774	LINC01191	ENSG00000234199	88496	None	None
L1FLnI_2q14.1f	L1	L1	L1FLnI	chr2	114408361	114417636	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU2-41P	ENSG00000222923	2489	SEPHS1P7	ENSG00000231926	147135	None	None
L1FLnI_2q14.1g	L1	L1	L1FLnI	chr2	114688567	114697375	-	noncoding	DPP10	protein_coding	ANTISENSE	ENSG00000175497	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.1h	L1	L1	L1FLnI	chr2	115015787	115024658	+	noncoding	DPP10	protein_coding	SENSE	ENSG00000175497	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.1i	L1	L1	L1FLnI	chr2	115376052	115386073	-	coding	DPP10	protein_coding	ANTISENSE	ENSG00000175497	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.1j	L1	L1	L1FLnI	chr2	115798933	115809073	-	coding	DPP10	protein_coding	ANTISENSE	ENSG00000175497	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.1k	L1	L1	L1FLnI	chr2	115888548	115899041	-	coding	AC016721.1	lncRNA	SENSE	ENSG00000287451	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.1l	L1	L1	L1FLnI	chr2	115959575	115969652	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104408.1	ENSG00000271667	717566	AC016721.1	ENSG00000287451	19284	None	None
L1FLnI_2q14.1m	L1	L1	L1FLnI	chr2	115978178	115988872	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104408.1	ENSG00000271667	698346	AC016721.1	ENSG00000287451	37887	None	None
L1FLnI_2q14.1n	L1	L1	L1FLnI	chr2	115980197	115988872	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104408.1	ENSG00000271667	698346	AC016721.1	ENSG00000287451	39906	None	None
L1FLnI_2q14.1o	L1	L1	L1FLnI	chr2	116048443	116058467	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104408.1	ENSG00000271667	628751	AC016721.1	ENSG00000287451	108152	None	None
L1FLnI_2q14.1p	L1	L1	L1FLnI	chr2	116331300	116340865	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104408.1	ENSG00000271667	346353	AC016721.1	ENSG00000287451	391009	None	None
L1FLnI_2q14.1q	L1	L1	L1FLnI	chr2	116355174	116364484	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016721.1	ENSG00000287451	414883	AC104408.1	ENSG00000271667	322734	None	None
L1FLnI_2q14.1r	L1	L1	L1FLnI	chr2	116409502	116418901	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016721.1	ENSG00000287451	469211	AC104408.1	ENSG00000271667	268317	None	None
L1FLnI_2q14.1s	L1	L1	L1FLnI	chr2	116997653	117007777	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC062016.2	ENSG00000235871	178892	MTND1P28	ENSG00000230158	16141	None	None
L1FLnI_2q14.1t	L1	L1	L1FLnI	chr2	117152536	117162551	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-190P	ENSG00000239185	12761	AC092170.1	ENSG00000227291	18341	None	None
L1FLnI_2q14.1u	L1	L1	L1FLnI	chr2	117295704	117307100	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092170.1	ENSG00000227291	114142	AC064856.1	ENSG00000286370	229287	None	None
L1FLnI_2q14.1v	L1	L1	L1FLnI	chr2	117295814	117307100	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092170.1	ENSG00000227291	114252	AC064856.1	ENSG00000286370	229287	None	None
L1FLnI_2q14.1w	L1	L1	L1FLnI	chr2	117355799	117365848	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092170.1	ENSG00000227291	174237	AC064856.1	ENSG00000286370	170539	None	None
L1FLnI_2q14.1x	L1	L1	L1FLnI	chr2	117355799	117364472	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092170.1	ENSG00000227291	174237	AC064856.1	ENSG00000286370	171915	None	None
L1FLnI_2q14.1y	L1	L1	L1FLnI	chr2	117468700	117479272	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092170.1	ENSG00000227291	287138	AC064856.1	ENSG00000286370	57115	None	None
L1FLnI_2q14.1z	L1	L1	L1FLnI	chr2	117521897	117530828	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092170.1	ENSG00000227291	340335	AC064856.1	ENSG00000286370	5559	None	None
L1FLnI_2q14.1aa	L1	L1	L1FLnI	chr2	117575738	117585205	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC064856.1	ENSG00000286370	36274	AC009312.1	ENSG00000238207	168934	None	None
L1FLnI_2q14.1ba	L1	L1	L1FLnI	chr2	117619755	117629778	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC064856.1	ENSG00000286370	80291	AC009312.1	ENSG00000238207	124361	None	chr2:117622627-117622632
L1FLnI_2q14.1ca	L1	L1	L1FLnI	chr2	117645686	117655715	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC064856.1	ENSG00000286370	106222	AC009312.1	ENSG00000238207	98424	None	None
L1FLnI_2q14.1da	L1	L1	L1FLnI	chr2	117774680	117784816	+	coding	AC009312.1	lncRNA	ANTISENSE	ENSG00000238207	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.1ea	L1	L1	L1FLnI	chr2	117800282	117810309	+	coding	AC009312.1	lncRNA	ANTISENSE	ENSG00000238207	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.1fa	L1	L1	L1FLnI	chr2	117870813	117879325	-	noncoding	HTR5BP	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000125631	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.1ga	L1	L1	L1FLnI	chr2	117919631	117929772	+	coding	HTR5BP,CCDC93	transcribed_unprocessed_pseudogene,protein_coding	SENSE,ANTISENSE	ENSG00000125631,ENSG00000125633	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.1ha	L1	L1	L1FLnI	chr2	117920185	117929772	+	coding	HTR5BP,CCDC93	transcribed_unprocessed_pseudogene,protein_coding	SENSE,ANTISENSE	ENSG00000125631,ENSG00000125633	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.2a	L1	L1	L1FLnI	chr2	118136502	118146520	-	coding	THORLNC	lncRNA	SENSE	ENSG00000226856	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:118142758-118142773
L1FLnI_2q14.2b	L1	L1	L1FLnI	chr2	118206926	118215904	+	noncoding	THORLNC	lncRNA	ANTISENSE	ENSG00000226856	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:118211126-118211391	chr2:118213686-118213727
L1FLnI_2q14.2c	L1	L1	L1FLnI	chr2	118406665	118416220	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	THORLNC	ENSG00000226856	184415	LINC01956	ENSG00000258910	350745	None	None
L1FLnI_2q14.2d	L1	L1	L1FLnI	chr2	118406665	118416204	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	THORLNC	ENSG00000226856	184415	LINC01956	ENSG00000258910	350761	None	None
L1FLnI_2q14.2e	L1	L1	L1FLnI	chr2	118450828	118461238	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01956	ENSG00000258910	305727	THORLNC	ENSG00000226856	228578	None	None
L1FLnI_2q14.2f	L1	L1	L1FLnI	chr2	118895263	118905292	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MARCO	ENSG00000019169	36874	EN1	ENSG00000163064	47615	chr2:118902736-118903027,chr2:118903662-118904068	None
L1FLnI_2q14.2g	L1	L1	L1FLnI	chr2	118950049	118960615	+	noncoding	MARCO,AC013457.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000019169,ENSG00000259094	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:118952981-118952985,chr2:118954786-118954804
L1FLnI_2q14.2h	L1	L1	L1FLnI	chr2	119044535	119054668	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C1QL2	ENSG00000144119	101575	MARCO	ENSG00000019169	49875	None	None
L1FLnI_2q14.2i	L1	L1	L1FLnI	chr2	119092270	119102347	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MARCO	ENSG00000019169	97610	C1QL2	ENSG00000144119	53896	None	None
L1FLnI_2q14.2j	L1	L1	L1FLnI	chr2	119492958	119501555	+	noncoding	SCTR	protein_coding	ANTISENSE	ENSG00000080293	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.2k	L1	L1	L1FLnI	chr2	120045174	120055318	-	noncoding	EPB41L5	protein_coding	ANTISENSE	ENSG00000115109	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.2l	L1	L1	L1FLnI	chr2	120079610	120089127	-	coding	EPB41L5	protein_coding	ANTISENSE	ENSG00000115109	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.2m	L1	L1	L1FLnI	chr2	120129687	120140952	+	noncoding	EPB41L5	protein_coding	SENSE	ENSG00000115109	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr2:120130213-120130456,chr2:120134347-120134697	None
L1FLnI_2q14.3a	L1	L1	L1FLnI	chr2	122012175	122022208	-	coding	AC011246.1	lncRNA	ANTISENSE	ENSG00000286481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.3b	L1	L1	L1FLnI	chr2	122045706	122055749	-	coding	AC011246.1	lncRNA	ANTISENSE	ENSG00000286481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.3c	L1	L1	L1FLnI	chr2	122547247	122557316	+	coding	AC011246.1	lncRNA	SENSE	ENSG00000286481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.3d	L1	L1	L1FLnI	chr2	122707595	122716428	+	noncoding	AC011246.1	lncRNA	SENSE	ENSG00000286481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.3e	L1	L1	L1FLnI	chr2	122768292	122778734	+	noncoding	AC011246.1	lncRNA	SENSE	ENSG00000286481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.3f	L1	L1	L1FLnI	chr2	123000996	123011343	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011246.1	ENSG00000286481	113305	AC062020.1	ENSG00000237856	53978	None	None
L1FLnI_2q14.3g	L1	L1	L1FLnI	chr2	123225800	123235071	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073409.2	ENSG00000287854	186415	LINC01826	ENSG00000232740	152319	None	None
L1FLnI_2q14.3h	L1	L1	L1FLnI	chr2	123329144	123340886	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01826	ENSG00000232740	255663	AC073409.2	ENSG00000287854	80600	None	None
L1FLnI_2q14.3i	L1	L1	L1FLnI	chr2	123625226	123635242	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073409.1	ENSG00000226708	180781	AC092646.2	ENSG00000235640	60060	None	None
L1FLnI_2q14.3j	L1	L1	L1FLnI	chr2	123732534	123742552	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092646.1	ENSG00000227738	19619	AC092646.2	ENSG00000235640	35138	None	None
L1FLnI_2q14.3k	L1	L1	L1FLnI	chr2	123732534	123741629	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092646.1	ENSG00000227738	20542	AC092646.2	ENSG00000235640	35138	None	None
L1FLnI_2q14.3l	L1	L1	L1FLnI	chr2	123798098	123808206	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC064859.1	ENSG00000279874	42316	AC092646.1	ENSG00000227738	35027	None	None
L1FLnI_2q14.3m	L1	L1	L1FLnI	chr2	123804754	123814474	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092646.1	ENSG00000227738	41683	AC064859.1	ENSG00000279874	36048	None	None
L1FLnI_2q14.3n	L1	L1	L1FLnI	chr2	123805285	123814474	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092646.1	ENSG00000227738	42214	AC064859.1	ENSG00000279874	36048	None	None
L1FLnI_2q14.3o	L1	L1	L1FLnI	chr2	123837010	123847103	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092646.1	ENSG00000227738	73939	AC064859.1	ENSG00000279874	3419	None	None
L1FLnI_2q14.3p	L1	L1	L1FLnI	chr2	123851820	123862091	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC064859.1	ENSG00000279874	1125	RN7SKP102	ENSG00000223118	7165	None	None
L1FLnI_2q14.3q	L1	L1	L1FLnI	chr2	123929011	123937901	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079154.1	ENSG00000228400	74083	RN7SKP102	ENSG00000223118	59441	None	None
L1FLnI_2q14.3r	L1	L1	L1FLnI	chr2	124066241	124074995	+	noncoding	CNTNAP5	protein_coding	SENSE	ENSG00000155052	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.3s	L1	L1	L1FLnI	chr2	124119451	124129573	+	noncoding	CNTNAP5	protein_coding	SENSE	ENSG00000155052	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.3t	L1	L1	L1FLnI	chr2	124136277	124146307	+	coding	CNTNAP5	protein_coding	SENSE	ENSG00000155052	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.3u	L1	L1	L1FLnI	chr2	124355808	124365834	-	coding	CNTNAP5	protein_coding	ANTISENSE	ENSG00000155052	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.3v	L1	L1	L1FLnI	chr2	124404372	124414393	+	coding	CNTNAP5	protein_coding	SENSE	ENSG00000155052	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.3w	L1	L1	L1FLnI	chr2	124404372	124414382	+	coding	CNTNAP5	protein_coding	SENSE	ENSG00000155052	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.3x	L1	L1	L1FLnI	chr2	124448033	124457665	+	noncoding	CNTNAP5	protein_coding	SENSE	ENSG00000155052	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.3y	L1	L1	L1FLnI	chr2	124448033	124456811	+	noncoding	CNTNAP5	protein_coding	SENSE	ENSG00000155052	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.3z	L1	L1	L1FLnI	chr2	124592641	124602668	-	coding	CNTNAP5	protein_coding	ANTISENSE	ENSG00000155052	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:124600864-124601200	None
L1FLnI_2q14.3aa	L1	L1	L1FLnI	chr2	124622784	124633224	+	noncoding	CNTNAP5	protein_coding	SENSE	ENSG00000155052	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.3ba	L1	L1	L1FLnI	chr2	125026141	125034675	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097499.2	ENSG00000286206	630656	RNU6-259P	ENSG00000206726	36816	None	None
L1FLnI_2q14.3ca	L1	L1	L1FLnI	chr2	125031359	125040660	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097499.2	ENSG00000286206	624671	RNU6-259P	ENSG00000206726	42034	None	None
L1FLnI_2q14.3da	L1	L1	L1FLnI	chr2	125215580	125224980	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC097499.2	ENSG00000286206	440351	RNU6-259P	ENSG00000206726	226255	None	None
L1FLnI_2q14.3ea	L1	L1	L1FLnI	chr2	125354472	125363958	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-259P	ENSG00000206726	365147	AC097499.2	ENSG00000286206	301373	None	None
L1FLnI_2q14.3fa	L1	L1	L1FLnI	chr2	125619456	125628043	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-259P	ENSG00000206726	630131	AC097499.2	ENSG00000286206	37288	None	None
L1FLnI_2q14.3ga	L1	L1	L1FLnI	chr2	125674136	125684518	-	noncoding	AC097499.2	lncRNA	ANTISENSE	ENSG00000286206	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.3ha	L1	L1	L1FLnI	chr2	125822035	125832174	+	coding	AC097499.1	processed_pseudogene	SENSE	ENSG00000224410	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.3ia	L1	L1	L1FLnI	chr2	125989345	125998215	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01941	ENSG00000226813	111546	AC097499.1	ENSG00000224410	166030	None	None
L1FLnI_2q14.3ja	L1	L1	L1FLnI	chr2	126156988	126166275	+	coding	AC142116.2	lncRNA	SENSE	ENSG00000286515	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.3ka	L1	L1	L1FLnI	chr2	126177550	126187564	-	coding	AC142116.2	lncRNA	ANTISENSE	ENSG00000286515	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.3la	L1	L1	L1FLnI	chr2	126330414	126340640	+	noncoding	AC023347.1	lncRNA	SENSE	ENSG00000235774	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q14.3ma	L1	L1	L1FLnI	chr2	126393162	126403726	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	YWHAZP2	ENSG00000213236	153709	AC023347.1	ENSG00000235774	49170	None	None
L1FLnI_2q14.3na	L1	L1	L1FLnI	chr2	126450874	126460179	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	YWHAZP2	ENSG00000213236	97256	AC023347.1	ENSG00000235774	106882	None	None
L1FLnI_2q14.3oa	L1	L1	L1FLnI	chr2	126957146	126967563	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-182P	ENSG00000238788	49858	TEX51	ENSG00000237524	55049	None	None
L1FLnI_2q14.3pa	L1	L1	L1FLnI	chr2	128427490	128436404	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP103	ENSG00000238379	8677	AC013277.1	ENSG00000252742	76563	None	None
L1FLnI_2q14.3qa	L1	L1	L1FLnI	chr2	128759691	128769945	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068483.1	ENSG00000238277	293901	AC012451.1	ENSG00000237532	178115	None	None
L1FLnI_2q14.3ra	L1	L1	L1FLnI	chr2	128845475	128854729	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC012451.1	ENSG00000237532	263899	AC068483.1	ENSG00000238277	209117	None	None
L1FLI_2q14.3	L1	L1	L1FLI	chr2	128857972	128866018	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC068483.1	ENSG00000238277	197828	AC012451.1	ENSG00000237532	276396	None	None
L1FLnI_2q14.3sa	L1	L1	L1FLnI	chr2	128942809	128952931	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC068483.1	ENSG00000238277	110915	AC012451.1	ENSG00000237532	361233	None	None
L1FLnI_2q14.3ta	L1	L1	L1FLnI	chr2	129037644	129047752	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC068483.1	ENSG00000238277	16094	AC012451.1	ENSG00000237532	456068	None	None
L1FLnI_2q14.3ua	L1	L1	L1FLnI	chr2	129044663	129054318	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068483.1	ENSG00000238277	9528	AC012451.1	ENSG00000237532	463087	None	None
L1FLnI_2q21.1a	L1	L1	L1FLnI	chr2	129145881	129155016	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01854	ENSG00000204460	87157	AC068483.1	ENSG00000238277	74156	None	None
L1FLnI_2q21.1b	L1	L1	L1FLnI	chr2	129528422	129538468	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP65	ENSG00000233428	31634	LINC02572	ENSG00000229536	286658	None	None
L1FLnI_2q21.1c	L1	L1	L1FLnI	chr2	129565781	129575447	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP65	ENSG00000233428	68993	LINC02572	ENSG00000229536	249679	None	None
L1FLnI_2q21.1d	L1	L1	L1FLnI	chr2	129628355	129637664	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02572	ENSG00000229536	187462	PPIAP65	ENSG00000233428	131567	None	None
L1FLnI_2q21.1e	L1	L1	L1FLnI	chr2	131340983	131351165	-	noncoding	PLEKHB2,AC073869.7,AC073869.9	protein_coding,lncRNA,unprocessed_pseudogene	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000115762,ENSG00000284604,ENSG00000284706	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q21.1f	L1	L1	L1FLnI	chr2	131370403	131379944	+	coding	MTND5P23,MTND4P21,AC073869.6,MTND3P18	unprocessed_pseudogene,unprocessed_pseudogene,unprocessed_pseudogene,unprocessed_pseudogene	ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000235080,ENSG00000231777,ENSG00000284003,ENSG00000283865	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q21.1g	L1	L1	L1FLnI	chr2	131370403	131379965	+	coding	MTND5P23,MTND4P21,AC073869.6,MTND3P18	unprocessed_pseudogene,unprocessed_pseudogene,unprocessed_pseudogene,unprocessed_pseudogene	ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000235080,ENSG00000231777,ENSG00000284003,ENSG00000283865	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q21.2a	L1	L1	L1FLnI	chr2	132062367	132072516	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC098826.3	ENSG00000271179	7774	AC093787.1	ENSG00000226886	24374	None	None
L1FLnI_2q21.2b	L1	L1	L1FLnI	chr2	132062377	132072516	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC098826.3	ENSG00000271179	7774	AC093787.1	ENSG00000226886	24384	None	None
L1FLnI_2q21.2c	L1	L1	L1FLnI	chr2	132227827	132237782	+	coding	ANKRD30BL	protein_coding	ANTISENSE	ENSG00000163046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q21.2d	L1	L1	L1FLnI	chr2	132451983	132461761	-	coding	GPR39	protein_coding	ANTISENSE	ENSG00000183840	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q21.2e	L1	L1	L1FLnI	chr2	132497594	132507556	-	noncoding	GPR39	protein_coding	ANTISENSE	ENSG00000183840	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q21.2f	L1	L1	L1FLnI	chr2	132525383	132535504	+	coding	GPR39	protein_coding	SENSE	ENSG00000183840	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q21.2g	L1	L1	L1FLnI	chr2	132534508	132543011	-	noncoding	GPR39	protein_coding	ANTISENSE	ENSG00000183840	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q21.2h	L1	L1	L1FLnI	chr2	132805281	132815792	-	noncoding	NCKAP5,AC010974.2	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000176771,ENSG00000286068	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q21.2i	L1	L1	L1FLnI	chr2	133029575	133038422	+	noncoding	NCKAP5	protein_coding	ANTISENSE	ENSG00000176771	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q21.2j	L1	L1	L1FLnI	chr2	133382573	133392684	-	coding	NCKAP5,RN7SKP154	protein_coding,misc_RNA	SENSE,SENSE	ENSG00000176771,ENSG00000222068	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q21.2k	L1	L1	L1FLnI	chr2	133464509	133474538	-	coding	NCKAP5	protein_coding	SENSE	ENSG00000176771	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q21.2l	L1	L1	L1FLnI	chr2	133543367	133553258	+	coding	NCKAP5	protein_coding	ANTISENSE	ENSG00000176771	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q21.2m	L1	L1	L1FLnI	chr2	133610789	133619817	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP93	ENSG00000200708	14390	AC092623.1	ENSG00000286697	408791	None	None
L1FLnI_2q21.2n	L1	L1	L1FLnI	chr2	133615826	133624770	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP93	ENSG00000200708	19427	AC092623.1	ENSG00000286697	403838	None	None
L1FLnI_2q21.2o	L1	L1	L1FLnI	chr2	133906982	133917004	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP93	ENSG00000200708	310583	AC092623.1	ENSG00000286697	111604	None	None
L1FLnI_2q21.2p	L1	L1	L1FLnI	chr2	133906982	133917031	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP93	ENSG00000200708	310583	AC092623.1	ENSG00000286697	111577	None	None
L1FLnI_2q21.2q	L1	L1	L1FLnI	chr2	134039281	134049404	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092623.1	ENSG00000286697	6684	MGAT5	ENSG00000152127	70579	None	None
L1FLnI_2q21.3a	L1	L1	L1FLnI	chr2	134650040	134660074	-	coding	TMEM163	protein_coding	SENSE	ENSG00000152128	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q21.3b	L1	L1	L1FLnI	chr2	134650056	134660074	-	coding	TMEM163	protein_coding	SENSE	ENSG00000152128	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q21.3c	L1	L1	L1FLnI	chr2	134746016	134756131	-	coding	CCNT2-AS1	lncRNA	SENSE	ENSG00000224043	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q21.3d	L1	L1	L1FLnI	chr2	134821953	134831958	+	coding	CCNT2-AS1	lncRNA	ANTISENSE	ENSG00000224043	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q21.3e	L1	L1	L1FLnI	chr2	135228312	135238448	+	coding	ZRANB3	protein_coding	ANTISENSE	ENSG00000121988	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q21.3f	L1	L1	L1FLnI	chr2	135291099	135301211	-	coding	ZRANB3	protein_coding	SENSE	ENSG00000121988	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q21.3g	L1	L1	L1FLnI	chr2	135377369	135387500	+	coding	ZRANB3	protein_coding	ANTISENSE	ENSG00000121988	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q21.3h	L1	L1	L1FLnI	chr2	135513185	135522220	-	noncoding	ZRANB3	protein_coding	SENSE	ENSG00000121988	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.1a	L1	L1	L1FLnI	chr2	136465486	136475322	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP141	ENSG00000251976	74817	SMC4P1	ENSG00000229568	69390	None	None
L1FLnI_2q22.1b	L1	L1	L1FLnI	chr2	136592567	136602678	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SMC4P1	ENSG00000229568	47025	THSD7B	ENSG00000144229	162867	None	None
L1FLnI_2q22.1c	L1	L1	L1FLnI	chr2	136940366	136950621	-	coding	THSD7B	protein_coding	ANTISENSE	ENSG00000144229	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.1d	L1	L1	L1FLnI	chr2	137070066	137080237	-	coding	THSD7B	protein_coding	ANTISENSE	ENSG00000144229	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.1e	L1	L1	L1FLnI	chr2	137098016	137108048	+	noncoding	THSD7B	protein_coding	SENSE	ENSG00000144229	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.1f	L1	L1	L1FLnI	chr2	137309008	137319034	-	coding	THSD7B	protein_coding	ANTISENSE	ENSG00000144229	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.1g	L1	L1	L1FLnI	chr2	137356744	137366903	+	noncoding	THSD7B	protein_coding	SENSE	ENSG00000144229	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.1h	L1	L1	L1FLnI	chr2	137392662	137402690	-	coding	THSD7B	protein_coding	ANTISENSE	ENSG00000144229	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.1i	L1	L1	L1FLnI	chr2	137551062	137561215	+	coding	THSD7B	protein_coding	SENSE	ENSG00000144229	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.1j	L1	L1	L1FLnI	chr2	137581845	137591934	-	coding	THSD7B	protein_coding	ANTISENSE	ENSG00000144229	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:137590813-137590816
L1FLnI_2q22.1k	L1	L1	L1FLnI	chr2	137649571	137658322	-	noncoding	THSD7B	protein_coding	ANTISENSE	ENSG00000144229	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.1l	L1	L1	L1FLnI	chr2	137730657	137739211	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNMT	ENSG00000150540	224809	AC016679.1	ENSG00000222394	15217	None	None
L1FLnI_2q22.1m	L1	L1	L1FLnI	chr2	137988316	137998655	+	coding	HNMT	protein_coding	SENSE	ENSG00000150540	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.1n	L1	L1	L1FLnI	chr2	137989521	137998655	+	coding	HNMT	protein_coding	SENSE	ENSG00000150540	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.1o	L1	L1	L1FLnI	chr2	138161042	138171803	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01832	ENSG00000224231	53864	AC097523.1	ENSG00000233045	106771	None	None
L1FLnI_2q22.1p	L1	L1	L1FLnI	chr2	138391946	138403618	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097523.2	ENSG00000237939	83976	AC097721.1	ENSG00000232915	8448	None	None
L1FLnI_2q22.1q	L1	L1	L1FLnI	chr2	138538300	138548382	-	coding	SPOPL	protein_coding	ANTISENSE	ENSG00000144228	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.1r	L1	L1	L1FLnI	chr2	138789538	138798987	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP286	ENSG00000222826	64610	NXPH2	ENSG00000144227	9148	None	None
L1FLnI_2q22.1s	L1	L1	L1FLnI	chr2	138792156	138802586	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NXPH2	ENSG00000144227	11766	RN7SKP286	ENSG00000222826	61011	None	None
L1FLnI_2q22.1t	L1	L1	L1FLnI	chr2	138936417	138946613	-	coding	AC023468.1	lncRNA	ANTISENSE	ENSG00000287147	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.1u	L1	L1	L1FLnI	chr2	139277396	139287110	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023468.1	ENSG00000287147	302390	AC013265.1	ENSG00000286778	36811	None	None
L1FLnI_2q22.1v	L1	L1	L1FLnI	chr2	139602709	139614476	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPS18BP2	ENSG00000235232	54071	AC016710.1	ENSG00000206901	91154	None	None
L1FLnI_2q22.1w	L1	L1	L1FLnI	chr2	139641005	139650108	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPS18BP2	ENSG00000235232	18439	AC016710.1	ENSG00000206901	129450	None	None
L1FLnI_2q22.1x	L1	L1	L1FLnI	chr2	139966551	139976069	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC078851.1	ENSG00000223554	140674	RN7SL283P	ENSG00000240977	6615	None	None
L1FLnI_2q22.1y	L1	L1	L1FLnI	chr2	139966551	139975565	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC078851.1	ENSG00000223554	140674	RN7SL283P	ENSG00000240977	7119	None	None
L1FLnI_2q22.1z	L1	L1	L1FLnI	chr2	140563287	140573779	+	noncoding	LRP1B	protein_coding	ANTISENSE	ENSG00000168702	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.1aa	L1	L1	L1FLnI	chr2	140563287	140573295	+	noncoding	LRP1B	protein_coding	ANTISENSE	ENSG00000168702	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.1ba	L1	L1	L1FLnI	chr2	140937988	140946820	+	noncoding	LRP1B	protein_coding	ANTISENSE	ENSG00000168702	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.1ca	L1	L1	L1FLnI	chr2	140965063	140974085	-	coding	LRP1B	protein_coding	SENSE	ENSG00000168702	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.1da	L1	L1	L1FLnI	chr2	141215288	141225487	+	noncoding	LRP1B	protein_coding	ANTISENSE	ENSG00000168702	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.1ea	L1	L1	L1FLnI	chr2	141370706	141380071	-	noncoding	LRP1B	protein_coding	SENSE	ENSG00000168702	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.1fa	L1	L1	L1FLnI	chr2	141441931	141452351	-	coding	LRP1B	protein_coding	SENSE	ENSG00000168702	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.2a	L1	L1	L1FLnI	chr2	141566582	141577085	+	noncoding	LRP1B	protein_coding	ANTISENSE	ENSG00000168702	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.2b	L1	L1	L1FLnI	chr2	141567892	141577085	+	noncoding	LRP1B	protein_coding	ANTISENSE	ENSG00000168702	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.2c	L1	L1	L1FLnI	chr2	141656529	141665685	+	noncoding	LRP1B	protein_coding	ANTISENSE	ENSG00000168702	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.2d	L1	L1	L1FLnI	chr2	142213074	142222595	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2V1P14	ENSG00000228134	320823	AC078882.1	ENSG00000244125	75244	None	None
L1FLnI_2q22.2e	L1	L1	L1FLnI	chr2	142255679	142264841	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2V1P14	ENSG00000228134	278577	AC078882.1	ENSG00000244125	117849	None	None
L1FLnI_2q22.2f	L1	L1	L1FLnI	chr2	142607283	142617312	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC013444.1	ENSG00000229781	236783	UBE2V1P14	ENSG00000228134	63308	None	None
L1FLnI_2q22.2g	L1	L1	L1FLnI	chr2	142724369	142734501	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2V1P14	ENSG00000228134	180394	AC013444.1	ENSG00000229781	119594	None	None
L1FLnI_2q22.2h	L1	L1	L1FLnI	chr2	142724369	142734491	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2V1P14	ENSG00000228134	180394	AC013444.1	ENSG00000229781	119604	None	None
L1FLnI_2q22.2i	L1	L1	L1FLnI	chr2	142784899	142793441	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2V1P14	ENSG00000228134	240924	AC013444.1	ENSG00000229781	60654	None	None
L1FLnI_2q22.2j	L1	L1	L1FLnI	chr2	142805777	142815793	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC013444.1	ENSG00000229781	38302	UBE2V1P14	ENSG00000228134	261802	None	None
L1FLnI_2q22.2k	L1	L1	L1FLnI	chr2	143002544	143012576	+	coding	KYNU	protein_coding	SENSE	ENSG00000115919	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.3a	L1	L1	L1FLnI	chr2	143535880	143546024	-	coding	ARHGAP15,AC079793.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000075884,ENSG00000228655	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.3b	L1	L1	L1FLnI	chr2	143658064	143668087	+	coding	ARHGAP15	protein_coding	SENSE	ENSG00000075884	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.3c	L1	L1	L1FLnI	chr2	143857458	143867487	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC079584.1	ENSG00000236356	37859	AC016910.1	ENSG00000200287	29776	None	None
L1FLnI_2q22.3d	L1	L1	L1FLnI	chr2	144634054	144642642	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TEX41	ENSG00000226674	23670	LINC01412	ENSG00000232606	54620	None	None
L1FLnI_2q22.3e	L1	L1	L1FLnI	chr2	144781477	144791258	+	coding	TEX41	lncRNA	SENSE	ENSG00000226674	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.3f	L1	L1	L1FLnI	chr2	144897100	144907103	-	coding	TEX41	lncRNA	ANTISENSE	ENSG00000226674	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.3g	L1	L1	L1FLnI	chr2	145778897	145788984	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC079163.2	ENSG00000286225	13171	AC079248.2	ENSG00000234119	37301	None	None
L1FLnI_2q22.3h	L1	L1	L1FLnI	chr2	145945688	145955838	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-2P	ENSG00000251905	189318	AC079248.1	ENSG00000233842	14542	None	None
L1FLnI_2q22.3i	L1	L1	L1FLnI	chr2	146294565	146304655	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL17P12	ENSG00000230559	99744	AC093084.1	ENSG00000227134	172772	None	None
L1FLnI_2q22.3j	L1	L1	L1FLnI	chr2	146294565	146304643	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL17P12	ENSG00000230559	99744	AC093084.1	ENSG00000227134	172784	None	None
L1FLnI_2q22.3k	L1	L1	L1FLnI	chr2	146402243	146411841	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL17P12	ENSG00000230559	207422	AC093084.1	ENSG00000227134	65586	None	None
L1FLnI_2q22.3l	L1	L1	L1FLnI	chr2	146638327	146648501	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PABPC1P2	ENSG00000198526	49017	AC103881.1	ENSG00000271583	185000	None	None
L1FLnI_2q22.3m	L1	L1	L1FLnI	chr2	146696033	146704810	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PABPC1P2	ENSG00000198526	106723	AC103881.1	ENSG00000271583	128691	None	None
L1FLnI_2q22.3n	L1	L1	L1FLnI	chr2	146784905	146795039	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PABPC1P2	ENSG00000198526	195595	AC103881.1	ENSG00000271583	38462	None	None
L1FLnI_2q22.3o	L1	L1	L1FLnI	chr2	146804084	146813513	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PABPC1P2	ENSG00000198526	214774	AC103881.1	ENSG00000271583	19988	chr2:146805407-146805454	chr2:146810189-146810192
L1FLnI_2q22.3p	L1	L1	L1FLnI	chr2	147147294	147157468	+	coding	AC018678.1	lncRNA	SENSE	ENSG00000287847	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q22.3q	L1	L1	L1FLnI	chr2	147178724	147189029	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018678.1	ENSG00000287847	26677	RNU6-692P	ENSG00000207225	219313	None	None
L1FLnI_2q22.3r	L1	L1	L1FLnI	chr2	147185432	147195036	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018678.1	ENSG00000287847	33385	RNU6-692P	ENSG00000207225	213306	None	None
L1FLnI_2q22.3s	L1	L1	L1FLnI	chr2	147261912	147271343	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-692P	ENSG00000207225	136999	AC018678.1	ENSG00000287847	109865	None	chr2:147265201-147265204
L1FLnI_2q22.3t	L1	L1	L1FLnI	chr2	147409447	147419009	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC013406.1	ENSG00000207161	53124	RNU6-692P	ENSG00000207225	999	None	None
L1FLnI_2q22.3u	L1	L1	L1FLnI	chr2	147579971	147590402	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP106	ENSG00000253083	123053	RNU6-715P	ENSG00000202074	84431	None	None
L1FLnI_2q22.3v	L1	L1	L1FLnI	chr2	147723506	147733528	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP106	ENSG00000253083	9952	AC009480.2	ENSG00000229143	76818	None	None
L1FLnI_2q22.3w	L1	L1	L1FLnI	chr2	147763024	147773133	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP106	ENSG00000253083	49470	AC009480.2	ENSG00000229143	37213	None	None
L1FLnI_2q23.1a	L1	L1	L1FLnI	chr2	148083724	148093319	+	noncoding	MBD5	protein_coding	SENSE	ENSG00000204406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q23.1b	L1	L1	L1FLnI	chr2	148148442	148158456	-	coding	MBD5	protein_coding	ANTISENSE	ENSG00000204406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q23.1c	L1	L1	L1FLnI	chr2	148185247	148195273	+	coding	MBD5	protein_coding	SENSE	ENSG00000204406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q23.1d	L1	L1	L1FLnI	chr2	148225614	148235135	-	noncoding	MBD5	protein_coding	ANTISENSE	ENSG00000204406	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chr2:148232385-148232665	None
L1FLnI_2q23.1e	L1	L1	L1FLnI	chr2	148307149	148317603	-	coding	MBD5	protein_coding	ANTISENSE	ENSG00000204406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q23.1f	L1	L1	L1FLnI	chr2	148322346	148332354	-	coding	MBD5	protein_coding	ANTISENSE	ENSG00000204406	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q23.1g	L1	L1	L1FLnI	chr2	148360034	148368983	+	coding	MBD5	protein_coding	SENSE	ENSG00000204406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q23.1h	L1	L1	L1FLnI	chr2	148377105	148386623	+	coding	MBD5	protein_coding	SENSE	ENSG00000204406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q23.1i	L1	L1	L1FLnI	chr2	148410357	148420041	-	noncoding	MBD5	protein_coding	ANTISENSE	ENSG00000204406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q23.1j	L1	L1	L1FLnI	chr2	148701959	148711405	+	noncoding	EPC2	protein_coding	SENSE	ENSG00000135999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q23.1k	L1	L1	L1FLnI	chr2	148714834	148724438	-	noncoding	EPC2	protein_coding	ANTISENSE	ENSG00000135999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q23.2a	L1	L1	L1FLnI	chr2	149250810	149261602	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM8A3P	ENSG00000224337	58991	LYPD6B	ENSG00000150556	35548	None	None
L1FLnI_2q23.2b	L1	L1	L1FLnI	chr2	149297337	149305897	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM8A3P	ENSG00000224337	14696	LYPD6B	ENSG00000150556	82075	None	None
L1FLnI_2q23.2c	L1	L1	L1FLnI	chr2	149402234	149411784	-	coding	LYPD6	protein_coding	ANTISENSE	ENSG00000187123	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q23.2d	L1	L1	L1FLnI	chr2	149493760	149504170	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MMADHC	ENSG00000168288	65467	LYPD6	ENSG00000187123	19622	None	None
L1FLnI_2q23.2e	L1	L1	L1FLnI	chr2	149501802	149510906	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MMADHC	ENSG00000168288	58731	LYPD6	ENSG00000187123	27664	None	None
L1FLnI_2q23.2f	L1	L1	L1FLnI	chr2	149544589	149554717	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MMADHC	ENSG00000168288	14920	LYPD6	ENSG00000187123	70451	None	None
L1FLnI_2q23.3a	L1	L1	L1FLnI	chr2	149637382	149647491	-	coding	MMADHC-DT	lncRNA	ANTISENSE	ENSG00000231969	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q23.3b	L1	L1	L1FLnI	chr2	149790132	149800253	-	coding	MMADHC-DT,LINC01931	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000231969,ENSG00000162947	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q23.3c	L1	L1	L1FLnI	chr2	149846959	149856966	+	coding	MMADHC-DT,LINC01931	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000231969,ENSG00000162947	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q23.3d	L1	L1	L1FLnI	chr2	149941767	149951792	+	coding	MMADHC-DT	lncRNA	SENSE	ENSG00000231969	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q23.3e	L1	L1	L1FLnI	chr2	149962235	149972365	+	coding	MMADHC-DT	lncRNA	SENSE	ENSG00000231969	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q23.3f	L1	L1	L1FLnI	chr2	149974448	149983526	+	noncoding	MMADHC-DT	lncRNA	SENSE	ENSG00000231969	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q23.3g	L1	L1	L1FLnI	chr2	150380766	150392329	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RND3	ENSG00000115963	75866	LINC01818	ENSG00000230645	24306	None	None
L1FLnI_2q23.3h	L1	L1	L1FLnI	chr2	150836878	150847402	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023469.2	ENSG00000228064	135104	LINC02612	ENSG00000224048	201060	None	None
L1FLnI_2q23.3i	L1	L1	L1FLnI	chr2	151698370	151708389	-	coding	NEB	protein_coding	SENSE	ENSG00000183091	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:151706922-151706935,chr2:151706938-151706972
L1FLnI_2q23.3j	L1	L1	L1FLnI	chr2	151739869	151749992	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NEB	ENSG00000183091	5382	ARL5A	ENSG00000162980	38992	None	None
L1FLnI_2q23.3k	L1	L1	L1FLnI	chr2	151739869	151750010	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NEB	ENSG00000183091	5382	ARL5A	ENSG00000162980	38974	None	None
L1FLnI_2q23.3l	L1	L1	L1FLnI	chr2	152892088	152902553	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBQLN4P2	ENSG00000226213	14321	ATP5PBP4	ENSG00000214025	256385	None	None
L1FLnI_2q23.3m	L1	L1	L1FLnI	chr2	152992640	153002362	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	UBQLN4P2	ENSG00000226213	114873	ATP5PBP4	ENSG00000214025	156576	None	None
L1FLnI_2q23.3n	L1	L1	L1FLnI	chr2	153007268	153017296	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ATP5PBP4	ENSG00000214025	141642	UBQLN4P2	ENSG00000226213	129501	None	None
L1FLnI_2q23.3o	L1	L1	L1FLnI	chr2	153086188	153095157	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ATP5PBP4	ENSG00000214025	63781	UBQLN4P2	ENSG00000226213	208421	None	None
L1FLnI_2q23.3p	L1	L1	L1FLnI	chr2	153086248	153095157	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ATP5PBP4	ENSG00000214025	63781	UBQLN4P2	ENSG00000226213	208481	None	None
L1FLnI_2q23.3q	L1	L1	L1FLnI	chr2	153250975	153260977	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01850	ENSG00000227708	76728	AC079150.1	ENSG00000226338	42812	None	None
L1FLnI_2q23.3r	L1	L1	L1FLnI	chr2	153356495	153366917	+	noncoding	LINC01850	lncRNA	SENSE	ENSG00000227708	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr2:153359628-153359980	None
L1FLnI_2q23.3s	L1	L1	L1FLnI	chr2	153397423	153407452	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC012501.3	ENSG00000242575	13225	RPL23AP29	ENSG00000214024	26359	None	None
L1FLnI_2q23.3t	L1	L1	L1FLnI	chr2	153433333	153443458	-	coding	AC012501.2	lncRNA	SENSE	ENSG00000227400	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q23.3u	L1	L1	L1FLnI	chr2	153522225	153531639	+	noncoding	AC012501.2	lncRNA	ANTISENSE	ENSG00000227400	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q23.3v	L1	L1	L1FLnI	chr2	153569487	153580329	-	noncoding	AC012501.2	lncRNA	SENSE	ENSG00000227400	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q23.3w	L1	L1	L1FLnI	chr2	153614243	153623625	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DNAJA1P2	ENSG00000236917	137825	AC012501.2	ENSG00000227400	20955	None	None
L1FLnI_2q23.3x	L1	L1	L1FLnI	chr2	153666060	153678653	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012501.2	ENSG00000227400	72772	DNAJA1P2	ENSG00000236917	82797	None	None
L1FLnI_2q23.3y	L1	L1	L1FLnI	chr2	153666060	153677780	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012501.2	ENSG00000227400	72772	DNAJA1P2	ENSG00000236917	83670	None	None
L1FLnI_2q23.3z	L1	L1	L1FLnI	chr2	153715949	153725966	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC012501.2	ENSG00000227400	122661	DNAJA1P2	ENSG00000236917	35484	None	None
L1FLnI_2q23.3aa	L1	L1	L1FLnI	chr2	153715949	153725964	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC012501.2	ENSG00000227400	122661	DNAJA1P2	ENSG00000236917	35486	None	None
L1FLnI_2q23.3ba	L1	L1	L1FLnI	chr2	153747604	153758798	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DNAJA1P2	ENSG00000236917	2652	AC012501.2	ENSG00000227400	154316	None	None
L1FLnI_2q23.3ca	L1	L1	L1FLnI	chr2	153748396	153758798	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DNAJA1P2	ENSG00000236917	2652	AC012501.2	ENSG00000227400	155108	None	None
L1FLnI_2q23.3da	L1	L1	L1FLnI	chr2	153781070	153791480	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DNAJA1P2	ENSG00000236917	18424	GALNT13	ENSG00000144278	80442	None	None
L1FLnI_2q23.3ea	L1	L1	L1FLnI	chr2	153814399	153824925	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DNAJA1P2	ENSG00000236917	51753	GALNT13	ENSG00000144278	46997	None	None
L1FLnI_2q23.3fa	L1	L1	L1FLnI	chr2	153906902	153917416	-	noncoding	GALNT13	protein_coding	ANTISENSE	ENSG00000144278	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.1a	L1	L1	L1FLnI	chr2	154009256	154018072	-	coding	GALNT13	protein_coding	ANTISENSE	ENSG00000144278	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.1b	L1	L1	L1FLnI	chr2	154019202	154028720	-	coding	GALNT13	protein_coding	ANTISENSE	ENSG00000144278	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.1c	L1	L1	L1FLnI	chr2	154147421	154157581	-	coding	GALNT13	protein_coding	ANTISENSE	ENSG00000144278	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.1d	L1	L1	L1FLnI	chr2	154559612	154568824	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP107	ENSG00000223290	21583	AC009227.2	ENSG00000238004	98792	None	None
L1FLnI_2q24.1e	L1	L1	L1FLnI	chr2	154838452	154848584	-	noncoding	KCNJ3	protein_coding	ANTISENSE	ENSG00000162989	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.1f	L1	L1	L1FLnI	chr2	154881955	154891055	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CBX3P6	ENSG00000228837	49486	KCNJ3	ENSG00000162989	23601	None	None
L1FLnI_2q24.1g	L1	L1	L1FLnI	chr2	155083765	155092919	-	noncoding	RNU6-1001P	snRNA	SENSE	ENSG00000223197	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.1h	L1	L1	L1FLnI	chr2	155345009	155355486	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073225.1	ENSG00000286679	169938	RNU6-546P	ENSG00000206718	14482	None	None
L1FLnI_2q24.1i	L1	L1	L1FLnI	chr2	155466130	155476144	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073225.1	ENSG00000286679	49280	RNU6-546P	ENSG00000206718	135603	None	None
L1FLnI_2q24.1j	L1	L1	L1FLnI	chr2	155588685	155597555	+	noncoding	AC073225.1	lncRNA	SENSE	ENSG00000286679	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.1k	L1	L1	L1FLnI	chr2	155588685	155597193	+	noncoding	AC073225.1	lncRNA	SENSE	ENSG00000286679	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.1l	L1	L1	L1FLnI	chr2	155744324	155753355	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073225.1	ENSG00000286679	79656	LINC01876	ENSG00000226383	258175	None	None
L1FLnI_2q24.1m	L1	L1	L1FLnI	chr2	155876409	155886078	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073225.1	ENSG00000286679	211741	LINC01876	ENSG00000226383	125452	None	None
L1FLnI_2q24.1n	L1	L1	L1FLnI	chr2	155962389	155972413	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073225.1	ENSG00000286679	297721	LINC01876	ENSG00000226383	39117	chr2:155972216-155972428	None
L1FLnI_2q24.1o	L1	L1	L1FLnI	chr2	156077750	156088159	-	coding	LINC01876	lncRNA	SENSE	ENSG00000226383	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.1p	L1	L1	L1FLnI	chr2	156078635	156088159	-	coding	LINC01876	lncRNA	SENSE	ENSG00000226383	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.1q	L1	L1	L1FLnI	chr2	156225624	156236358	+	noncoding	LINC01876	lncRNA	ANTISENSE	ENSG00000226383	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.1r	L1	L1	L1FLnI	chr2	156251020	156261042	+	coding	LINC01876	lncRNA	ANTISENSE	ENSG00000226383	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.1s	L1	L1	L1FLnI	chr2	156251020	156261032	+	coding	LINC01876	lncRNA	ANTISENSE	ENSG00000226383	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.1t	L1	L1	L1FLnI	chr2	156369764	156379889	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GPD2	ENSG00000115159	55401	NR4A2	ENSG00000153234	27416	None	None
L1FLnI_2q24.1u	L1	L1	L1FLnI	chr2	156823932	156833937	+	noncoding	AC096589.2,AC096589.1	lncRNA,lncRNA	SENSE,SENSE	ENSG00000287048,ENSG00000286889	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.1v	L1	L1	L1FLnI	chr2	156961829	156971983	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108057.1	ENSG00000286530	61854	AC096589.1	ENSG00000286889	70669	None	None
L1FLnI_2q24.1w	L1	L1	L1FLnI	chr2	156961844	156971983	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108057.1	ENSG00000286530	61854	AC096589.1	ENSG00000286889	70684	None	None
L1FLnI_2q24.1x	L1	L1	L1FLnI	chr2	157096761	157106303	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CDK7P1	ENSG00000213194	104544	AC108057.1	ENSG00000286530	47045	None	None
L1FLnI_2q24.1y	L1	L1	L1FLnI	chr2	157137849	157148340	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDK7P1	ENSG00000213194	62507	AC108057.1	ENSG00000286530	88133	None	None
L1FLnI_2q24.1z	L1	L1	L1FLnI	chr2	157273325	157283456	-	noncoding	GALNT5	protein_coding	ANTISENSE	ENSG00000136542	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.1aa	L1	L1	L1FLnI	chr2	157365037	157375066	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ERMN	ENSG00000136541	37324	FAM133DP	ENSG00000230562	4658	None	None
L1FLnI_2q24.1ba	L1	L1	L1FLnI	chr2	157397101	157407196	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CYTIP	ENSG00000115165	7423	FAM133DP	ENSG00000230562	16687	chr2:157403117-157403345	chr2:157406656-157406668,chr2:157406903-157406914
L1FLnI_2q24.1ca	L1	L1	L1FLnI	chr2	157511645	157521673	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CYTIP	ENSG00000115165	22684	ACVR1C	ENSG00000123612	5094	None	None
L1FLnI_2q24.1da	L1	L1	L1FLnI	chr2	157562855	157572877	+	coding	ACVR1C	protein_coding	ANTISENSE	ENSG00000123612	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.1ea	L1	L1	L1FLnI	chr2	157605179	157616812	-	noncoding	ACVR1C	protein_coding	SENSE	ENSG00000123612	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.1fa	L1	L1	L1FLnI	chr2	157606170	157616812	-	noncoding	ACVR1C	protein_coding	SENSE	ENSG00000123612	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.1ga	L1	L1	L1FLnI	chr2	157694868	157704670	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ACVR1C	ENSG00000123612	66004	AC019186.1	ENSG00000234584	21038	None	None
L1FLnI_2q24.1ha	L1	L1	L1FLnI	chr2	157700678	157711117	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ACVR1C	ENSG00000123612	71814	AC019186.1	ENSG00000234584	14591	None	None
L1FLnI_2q24.1ia	L1	L1	L1FLnI	chr2	158070711	158079388	+	noncoding	UPP2	protein_coding	SENSE	ENSG00000007001	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.1ja	L1	L1	L1FLnI	chr2	158083377	158093529	-	noncoding	UPP2	protein_coding	ANTISENSE	ENSG00000007001	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.1ka	L1	L1	L1FLnI	chr2	158219334	158229472	+	coding	CCDC148-AS1,CCDC148	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000227480,ENSG00000153237	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.1la	L1	L1	L1FLnI	chr2	158274640	158284788	+	coding	CCDC148	protein_coding	ANTISENSE	ENSG00000153237	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_2q24.1	L1	L1	L1FLI	chr2	158350221	158358260	+	coding	CCDC148	protein_coding	ANTISENSE	ENSG00000153237	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.1ma	L1	L1	L1FLnI	chr2	158416633	158425227	+	coding	CCDC148,HNRNPDLP2	protein_coding,unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000153237,ENSG00000234890	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.1na	L1	L1	L1FLnI	chr2	158430010	158440137	+	coding	CCDC148	protein_coding	ANTISENSE	ENSG00000153237	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.1oa	L1	L1	L1FLnI	chr2	158519119	158529149	+	coding	PKP4	protein_coding	SENSE	ENSG00000144283	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.2a	L1	L1	L1FLnI	chr2	159352196	159362619	+	noncoding	BAZ2B	protein_coding	ANTISENSE	ENSG00000123636	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.2b	L1	L1	L1FLnI	chr2	159620460	159630334	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009506.2	ENSG00000224152	3378	AC009961.1	ENSG00000226266	40374	None	None
L1FLnI_2q24.2c	L1	L1	L1FLnI	chr2	159818238	159828618	+	coding	LY75-CD302,LY75	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000248672,ENSG00000054219	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.2d	L1	L1	L1FLnI	chr2	160111018	160121180	+	coding	ITGB6	protein_coding	ANTISENSE	ENSG00000115221	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.2e	L1	L1	L1FLnI	chr2	160144981	160155081	+	noncoding	ITGB6,AC092153.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000115221,ENSG00000285155	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.2f	L1	L1	L1FLnI	chr2	160177192	160187627	+	coding	ITGB6,AC092153.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000115221,ENSG00000285155	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.2g	L1	L1	L1FLnI	chr2	160622628	160632217	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096656.1	ENSG00000279844	217096	RBMS1	ENSG00000153250	128821	None	None
L1FLnI_2q24.2h	L1	L1	L1FLnI	chr2	160653540	160662914	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBMS1	ENSG00000153250	159733	AC096656.1	ENSG00000279844	186399	None	None
L1FLnI_2q24.2i	L1	L1	L1FLnI	chr2	160756420	160766590	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC096656.1	ENSG00000279844	82723	RBMS1	ENSG00000153250	262613	None	None
L1FLnI_2q24.2j	L1	L1	L1FLnI	chr2	160763001	160773115	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RBMS1	ENSG00000153250	269194	AC096656.1	ENSG00000279844	76198	None	None
L1FLnI_2q24.2k	L1	L1	L1FLnI	chr2	160772822	160783075	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBMS1	ENSG00000153250	279015	AC096656.1	ENSG00000279844	66238	None	None
L1FLnI_2q24.2l	L1	L1	L1FLnI	chr2	160793834	160803979	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RBMS1	ENSG00000153250	300027	AC096656.1	ENSG00000279844	45334	None	None
L1FLnI_2q24.2m	L1	L1	L1FLnI	chr2	160793834	160803966	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RBMS1	ENSG00000153250	300027	AC096656.1	ENSG00000279844	45347	None	None
L1FLnI_2q24.2n	L1	L1	L1FLnI	chr2	160822258	160830854	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096656.1	ENSG00000279844	18459	RBMS1	ENSG00000153250	328451	None	None
L1FLnI_2q24.2o	L1	L1	L1FLnI	chr2	160850221	160860248	-	coding	AC096656.1	TEC	SENSE	ENSG00000279844	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.2p	L1	L1	L1FLnI	chr2	160997000	161005673	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC009313.2	ENSG00000232337	42933	RN7SL423P	ENSG00000244372	119150	None	None
L1FLnI_2q24.2q	L1	L1	L1FLnI	chr2	161006503	161016950	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL423P	ENSG00000244372	128653	AC009313.2	ENSG00000232337	31656	None	None
L1FLnI_2q24.2r	L1	L1	L1FLnI	chr2	161140825	161151269	-	noncoding	AC009313.1,TANK	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000224467,ENSG00000136560	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:161150613-161150617
L1FLnI_2q24.2s	L1	L1	L1FLnI	chr2	161282704	161292809	+	coding	AC009299.3	lncRNA	ANTISENSE	ENSG00000235724	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.2t	L1	L1	L1FLnI	chr2	161456800	161465984	-	noncoding	SLC4A10	protein_coding	ANTISENSE	ENSG00000144290	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.2u	L1	L1	L1FLnI	chr2	161532750	161542194	+	coding	SLC4A10	protein_coding	SENSE	ENSG00000144290	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.2v	L1	L1	L1FLnI	chr2	161886299	161895411	-	coding	SLC4A10	protein_coding	ANTISENSE	ENSG00000144290	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.2w	L1	L1	L1FLnI	chr2	162867443	162876167	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCNH7	ENSG00000184611	28676	RPL7P61	ENSG00000230282	276084	None	None
L1FLnI_2q24.3a	L1	L1	L1FLnI	chr2	163493887	163504352	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-627P	ENSG00000200902	204791	FIGN	ENSG00000182263	89044	None	None
L1FLnI_2q24.3b	L1	L1	L1FLnI	chr2	164258174	164267632	+	coding	AC016766.1	lncRNA	ANTISENSE	ENSG00000237844	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_2q24.3a	L1	L1	L1FLI	chr2	165484931	165492977	+	coding	CSRNP3	protein_coding	SENSE	ENSG00000178662	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.3c	L1	L1	L1FLnI	chr2	165731165	165741194	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GALNT3	ENSG00000115339	6394	CSRNP3	ENSG00000178662	41758	None	None
L1FLnI_2q24.3d	L1	L1	L1FLnI	chr2	165967997	165978430	+	noncoding	SCN1A-AS1	lncRNA	SENSE	ENSG00000236107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.3e	L1	L1	L1FLnI	chr2	166505082	166515506	-	noncoding	SCN7A	protein_coding	SENSE	ENSG00000136546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.3f	L1	L1	L1FLnI	chr2	166577725	166587877	+	coding	SCN7A	protein_coding	ANTISENSE	ENSG00000136546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.3g	L1	L1	L1FLnI	chr2	166682337	166692439	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SCN7A	ENSG00000136546	70855	XIRP2	ENSG00000163092	196048	None	None
L1FLnI_2q24.3h	L1	L1	L1FLnI	chr2	166702227	166712245	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	XIRP2	ENSG00000163092	176242	SCN7A	ENSG00000136546	90745	None	None
L1FLnI_2q24.3i	L1	L1	L1FLnI	chr2	166850213	166860348	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SCN7A	ENSG00000136546	238731	XIRP2	ENSG00000163092	28139	None	None
L1FLnI_2q24.3j	L1	L1	L1FLnI	chr2	166907115	166916955	-	coding	XIRP2	protein_coding	ANTISENSE	ENSG00000163092	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_2q24.3b	L1	L1	L1FLI	chr2	166987451	166995506	+	coding	XIRP2	protein_coding	SENSE	ENSG00000163092	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.3k	L1	L1	L1FLnI	chr2	167021953	167031283	-	coding	XIRP2	protein_coding	ANTISENSE	ENSG00000163092	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.3l	L1	L1	L1FLnI	chr2	167036672	167046378	+	coding	XIRP2	protein_coding	SENSE	ENSG00000163092	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.3m	L1	L1	L1FLnI	chr2	167081448	167091467	-	coding	XIRP2	protein_coding	ANTISENSE	ENSG00000163092	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.3n	L1	L1	L1FLnI	chr2	167373361	167382499	-	noncoding	AC073050.1	lncRNA	ANTISENSE	ENSG00000228222	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.3o	L1	L1	L1FLnI	chr2	167442078	167451493	-	noncoding	AC073050.1	lncRNA	ANTISENSE	ENSG00000228222	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.3p	L1	L1	L1FLnI	chr2	167662457	167672474	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CTAGE14P	ENSG00000214211	41189	RNU7-148P	ENSG00000238357	30916	None	None
L1FLnI_2q24.3q	L1	L1	L1FLnI	chr2	167803828	167813926	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	B3GALT1-AS1	ENSG00000235335	831	CTAGE14P	ENSG00000214211	87763	None	None
L1FLnI_2q24.3r	L1	L1	L1FLnI	chr2	167831544	167841689	+	coding	B3GALT1-AS1	lncRNA	ANTISENSE	ENSG00000235335	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.3s	L1	L1	L1FLnI	chr2	167840737	167850105	+	coding	B3GALT1-AS1	lncRNA	ANTISENSE	ENSG00000235335	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.3t	L1	L1	L1FLnI	chr2	167885633	167895480	-	noncoding	B3GALT1-AS1	lncRNA	SENSE	ENSG00000235335	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.3u	L1	L1	L1FLnI	chr2	168380355	168389748	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STK39	ENSG00000198648	132760	RN7SL813P	ENSG00000241074	61576	None	None
L1FLnI_2q24.3v	L1	L1	L1FLnI	chr2	168610920	168620461	+	noncoding	CERS6	protein_coding	SENSE	ENSG00000172292	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q24.3w	L1	L1	L1FLnI	chr2	168610920	168620511	+	noncoding	CERS6	protein_coding	SENSE	ENSG00000172292	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.1a	L1	L1	L1FLnI	chr2	169117427	169126662	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2V1P6	ENSG00000235995	1747	LRP2	ENSG00000081479	447	None	None
L1FLnI_2q31.1b	L1	L1	L1FLnI	chr2	169245125	169255156	+	coding	LRP2	protein_coding	ANTISENSE	ENSG00000081479	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.1c	L1	L1	L1FLnI	chr2	169307725	169317235	-	coding	LRP2	protein_coding	SENSE	ENSG00000081479	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.1d	L1	L1	L1FLnI	chr2	169395707	169405799	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LRP2	ENSG00000081479	33173	BBS5	ENSG00000163093	73681	None	None
L1FLnI_2q31.1e	L1	L1	L1FLnI	chr2	169449283	169459434	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LRP2	ENSG00000081479	86749	BBS5	ENSG00000163093	20046	None	None
L1FLnI_2q31.1f	L1	L1	L1FLnI	chr2	170122111	170132918	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1006P	ENSG00000252807	2013	MYO3B	ENSG00000071909	45227	None	None
L1FLnI_2q31.1g	L1	L1	L1FLnI	chr2	170250397	170261228	+	noncoding	MYO3B	protein_coding	SENSE	ENSG00000071909	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:170255927-170256333	None
L1FLnI_2q31.1h	L1	L1	L1FLnI	chr2	170622075	170632171	-	coding	MYO3B	protein_coding	ANTISENSE	ENSG00000071909	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.1i	L1	L1	L1FLnI	chr2	171349354	171359609	-	coding	METTL8	protein_coding	SENSE	ENSG00000123600	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.1j	L1	L1	L1FLnI	chr2	171640787	171650919	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DYNC1I2	ENSG00000077380	36490	RPL21P38	ENSG00000233934	53528	None	None
L1FLnI_2q31.1k	L1	L1	L1FLnI	chr2	172186749	172196914	-	coding	AC104088.1	lncRNA	ANTISENSE	ENSG00000232555	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:172196520-172197536	chr2:172196796-172196806,chr2:172196838-172196853
L1FLnI_2q31.1l	L1	L1	L1FLnI	chr2	172186766	172196914	-	coding	AC104088.1	lncRNA	ANTISENSE	ENSG00000232555	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:172196520-172197536	chr2:172196796-172196806,chr2:172196838-172196853
L1FLnI_2q31.1m	L1	L1	L1FLnI	chr2	172264207	172274364	-	noncoding	AC104088.1	lncRNA	ANTISENSE	ENSG00000232555	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.1n	L1	L1	L1FLnI	chr2	172311772	172321797	+	coding	AC104088.1	lncRNA	SENSE	ENSG00000232555	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.1o	L1	L1	L1FLnI	chr2	172644881	172653822	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PDK1	ENSG00000152256	36212	AC018712.1	ENSG00000230104	20390	None	None
L1FLnI_2q31.1p	L1	L1	L1FLnI	chr2	173109932	173119358	-	noncoding	MAP3K20	protein_coding	ANTISENSE	ENSG00000091436	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:173117794-173117799
L1FLnI_2q31.1q	L1	L1	L1FLnI	chr2	173526791	173536817	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC013410.1	ENSG00000237016	38293	PPIAP66	ENSG00000226131	40429	None	None
L1FLnI_2q31.1r	L1	L1	L1FLnI	chr2	173556113	173566558	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP66	ENSG00000226131	69751	AC013410.1	ENSG00000237016	8552	None	None
L1FLI_2q31.1a	L1	L1	L1FLI	chr2	173698365	173706412	-	coding	AC013410.2	processed_pseudogene	SENSE	ENSG00000237617	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_2q31.1	L1	L1	L1ORF2	chr2	174267428	174275481	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC013467.1	ENSG00000201088	2447	AC013467.2	ENSG00000227180	23843	None	None
L1FLnI_2q31.1s	L1	L1	L1FLnI	chr2	174403960	174413982	-	coding	SCRN3	protein_coding	ANTISENSE	ENSG00000144306	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.1t	L1	L1	L1FLnI	chr2	175061327	175070350	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007435.1	ENSG00000227187	27135	ATF2	ENSG00000115966	1900	None	None
L1FLI_2q31.1b	L1	L1	L1FLI	chr2	175480953	175488998	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	EXTL2P1	ENSG00000223976	353889	AC093459.1	ENSG00000229066	17773	None	None
L1FLnI_2q31.1u	L1	L1	L1FLnI	chr2	175495307	175507155	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EXTL2P1	ENSG00000223976	335732	AC093459.1	ENSG00000229066	32127	None	None
L1FLnI_2q31.1v	L1	L1	L1FLnI	chr2	175588048	175598063	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	EXTL2P1	ENSG00000223976	244824	AC093459.1	ENSG00000229066	124868	None	chr2:175594168-175594185
L1FLnI_2q31.1w	L1	L1	L1FLnI	chr2	175705322	175715773	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093459.1	ENSG00000229066	242142	EXTL2P1	ENSG00000223976	127114	None	None
L1FLnI_2q31.1x	L1	L1	L1FLnI	chr2	175713706	175723230	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093459.1	ENSG00000229066	250526	EXTL2P1	ENSG00000223976	119657	None	None
L1FLnI_2q31.1y	L1	L1	L1FLnI	chr2	175756097	175766129	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093459.1	ENSG00000229066	292917	EXTL2P1	ENSG00000223976	76758	None	None
L1FLnI_2q31.1z	L1	L1	L1FLnI	chr2	175954090	175964210	+	coding	LNPK	protein_coding	ANTISENSE	ENSG00000144320	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.1aa	L1	L1	L1FLnI	chr2	176217657	176227088	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP25	ENSG00000230384	15023	AC016739.1	ENSG00000218175	16405	None	None
L1FLnI_2q31.1ba	L1	L1	L1FLnI	chr2	176305425	176315532	-	coding	MTX2	protein_coding	ANTISENSE	ENSG00000128654	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.1ca	L1	L1	L1FLnI	chr2	176792924	176802927	+	coding	LINC01117,AC092162.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000224577,ENSG00000230552	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.2a	L1	L1	L1FLnI	chr2	177368374	177377494	-	coding	NFE2L2,AC019080.1	protein_coding,lncRNA	SENSE,SENSE	ENSG00000116044,ENSG00000213963	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.2b	L1	L1	L1FLnI	chr2	177425151	177434307	-	noncoding	AGPS	protein_coding	ANTISENSE	ENSG00000018510	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.2c	L1	L1	L1FLnI	chr2	177781897	177792049	+	coding	PDE11A,PDE11A	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000128655,ENSG00000284741	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.2d	L1	L1	L1FLnI	chr2	177969575	177979590	+	coding	PDE11A,PDE11A,AC011998.3	protein_coding,protein_coding,lncRNA	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000128655,ENSG00000284741,ENSG00000236664	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.2e	L1	L1	L1FLnI	chr2	178029033	178038548	+	noncoding	PDE11A,PDE11A	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000128655,ENSG00000284741	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.2f	L1	L1	L1FLnI	chr2	178045873	178056010	+	noncoding	PDE11A,PDE11A	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000128655,ENSG00000284741	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.2g	L1	L1	L1FLnI	chr2	178348615	178358747	+	noncoding	OSBPL6	protein_coding	SENSE	ENSG00000079156	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.2h	L1	L1	L1FLnI	chr2	178961825	178971427	+	noncoding	AC092640.1,CCDC141	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000287149,ENSG00000163492	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.2i	L1	L1	L1FLnI	chr2	178978953	178988982	+	coding	AC092640.1,CCDC141	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000287149,ENSG00000163492	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.2j	L1	L1	L1FLnI	chr2	179060686	179070825	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SESTD1	ENSG00000187231	30853	CCDC141	ENSG00000163492	10600	None	None
L1FLnI_2q31.2k	L1	L1	L1FLnI	chr2	179086889	179097060	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SESTD1	ENSG00000187231	4618	CCDC141	ENSG00000163492	36803	None	None
L1FLnI_2q31.2l	L1	L1	L1FLnI	chr2	179192446	179202431	+	coding	SESTD1	protein_coding	ANTISENSE	ENSG00000187231	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.2m	L1	L1	L1FLnI	chr2	179192446	179202418	+	coding	SESTD1	protein_coding	ANTISENSE	ENSG00000187231	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.2n	L1	L1	L1FLnI	chr2	179202632	179212113	+	noncoding	SESTD1	protein_coding	ANTISENSE	ENSG00000187231	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.2o	L1	L1	L1FLnI	chr2	179208525	179218640	+	noncoding	SESTD1	protein_coding	ANTISENSE	ENSG00000187231	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.2p	L1	L1	L1FLnI	chr2	179382258	179392403	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093911.1	ENSG00000237477	96551	AC068042.1	ENSG00000237964	7325	None	None
L1FLnI_2q31.2q	L1	L1	L1FLnI	chr2	179382258	179392390	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093911.1	ENSG00000237477	96551	AC068042.1	ENSG00000237964	7338	None	None
L1FLnI_2q31.2r	L1	L1	L1FLnI	chr2	179493563	179502385	+	noncoding	ZNF385B	protein_coding	ANTISENSE	ENSG00000144331	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.3a	L1	L1	L1FLnI	chr2	179751438	179761599	-	coding	ZNF385B	protein_coding	SENSE	ENSG00000144331	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.3b	L1	L1	L1FLnI	chr2	180027043	180036353	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012669.1	ENSG00000270289	436784	CWC22	ENSG00000163510	19746	None	None
L1FLnI_2q31.3c	L1	L1	L1FLnI	chr2	180271744	180280978	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012669.1	ENSG00000270289	192159	CWC22	ENSG00000163510	264447	None	None
L1FLnI_2q31.3d	L1	L1	L1FLnI	chr2	180272121	180280978	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012669.1	ENSG00000270289	192159	CWC22	ENSG00000163510	264824	None	None
L1FLnI_2q31.3e	L1	L1	L1FLnI	chr2	180325964	180334819	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CWC22	ENSG00000163510	318667	AC012669.1	ENSG00000270289	138318	None	None
L1FLnI_2q31.3f	L1	L1	L1FLnI	chr2	180526225	180536228	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC009478.1	ENSG00000225258	35484	AC012669.1	ENSG00000270289	52806	None	None
L1FLnI_2q31.3g	L1	L1	L1FLnI	chr2	180585121	180595217	-	coding	AC009478.1	lncRNA	SENSE	ENSG00000225258	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_2q31.3	L1	L1	L1ORF2	chr2	180832647	180840692	-	coding	SCHLAP1	lncRNA	ANTISENSE	ENSG00000281131	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.3h	L1	L1	L1FLnI	chr2	180878981	180889081	+	noncoding	SCHLAP1	lncRNA	SENSE	ENSG00000281131	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:180886417-180886419
L1FLnI_2q31.3i	L1	L1	L1FLnI	chr2	181085428	181095879	+	coding	AC068196.1,LINC01934	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000238171,ENSG00000234663	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.3j	L1	L1	L1FLnI	chr2	181290062	181298931	+	coding	LINC01934	lncRNA	SENSE	ENSG00000234663	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.3k	L1	L1	L1FLnI	chr2	181407308	181417780	+	noncoding	LINC01934	lncRNA	SENSE	ENSG00000234663	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:181407512-181407516
L1FLnI_2q31.3l	L1	L1	L1FLnI	chr2	181728151	181738329	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SAP18P2	ENSG00000223873	33251	RNU6ATAC19P	ENSG00000221023	277	None	None
L1FLnI_2q31.3m	L1	L1	L1FLnI	chr2	181798063	181808207	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009962.1	ENSG00000260742	79644	RNU6ATAC19P	ENSG00000221023	59348	None	None
L1FLnI_2q31.3n	L1	L1	L1FLnI	chr2	182008032	182018622	-	noncoding	PPP1R1C	protein_coding	ANTISENSE	ENSG00000150722	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q31.3o	L1	L1	L1FLnI	chr2	182024709	182034739	-	coding	PPP1R1C	protein_coding	ANTISENSE	ENSG00000150722	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.1a	L1	L1	L1FLnI	chr2	182208906	182218934	+	coding	PDE1A	protein_coding	ANTISENSE	ENSG00000115252	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.1b	L1	L1	L1FLnI	chr2	182208907	182218934	+	coding	PDE1A	protein_coding	ANTISENSE	ENSG00000115252	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.1c	L1	L1	L1FLnI	chr2	182559566	182569040	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DNAJC10	ENSG00000077232	147001	PDE1A	ENSG00000115252	36374	None	None
L1FLnI_2q32.1d	L1	L1	L1FLnI	chr2	182683056	182693173	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PDE1A	ENSG00000115252	159864	DNAJC10	ENSG00000077232	22868	None	None
L1FLnI_2q32.1e	L1	L1	L1FLnI	chr2	182683056	182693172	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PDE1A	ENSG00000115252	159864	DNAJC10	ENSG00000077232	22869	None	None
L1FLnI_2q32.1f	L1	L1	L1FLnI	chr2	182768327	182778494	-	coding	DNAJC10	protein_coding	ANTISENSE	ENSG00000077232	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.1g	L1	L1	L1FLnI	chr2	182872162	182881123	+	coding	RNU6-1122P	snRNA	SENSE	ENSG00000207178	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.1h	L1	L1	L1FLnI	chr2	183447816	183457976	-	coding	AC021851.2	lncRNA	ANTISENSE	ENSG00000287621	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.1i	L1	L1	L1FLnI	chr2	183582697	183592837	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC021851.2	ENSG00000287621	87196	CACYBPP2	ENSG00000177855	14605	None	None
L1FLnI_2q32.1j	L1	L1	L1FLnI	chr2	183615520	183625909	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093639.3	ENSG00000286879	272041	CACYBPP2	ENSG00000177855	7401	None	None
L1FLnI_2q32.1k	L1	L1	L1FLnI	chr2	183684692	183696219	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093639.3	ENSG00000286879	201731	CACYBPP2	ENSG00000177855	76573	None	None
L1FLnI_2q32.1l	L1	L1	L1FLnI	chr2	183838047	183848477	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CACYBPP2	ENSG00000177855	229928	AC093639.3	ENSG00000286879	49473	None	None
L1FLnI_2q32.1m	L1	L1	L1FLnI	chr2	183846025	183856050	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CACYBPP2	ENSG00000177855	237906	AC093639.3	ENSG00000286879	41900	None	None
L1FLnI_2q32.1n	L1	L1	L1FLnI	chr2	183971946	183980831	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093639.1	ENSG00000234172	22834	AC093639.2	ENSG00000286807	16541	None	None
L1FLnI_2q32.1o	L1	L1	L1FLnI	chr2	184059620	184070090	-	noncoding	AC096555.1	lncRNA	SENSE	ENSG00000286152	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.1p	L1	L1	L1FLnI	chr2	184229460	184238229	-	coding	AC020584.1	lncRNA	ANTISENSE	ENSG00000286980	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.1q	L1	L1	L1FLnI	chr2	184642175	184652951	+	noncoding	ZNF804A	protein_coding	SENSE	ENSG00000170396	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:184648254-184648267,chr2:184649934-184649979
L1FLnI_2q32.1r	L1	L1	L1FLnI	chr2	184813660	184823036	+	noncoding	ZNF804A	protein_coding	SENSE	ENSG00000170396	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:184814020-184814025
L1FLnI_2q32.1s	L1	L1	L1FLnI	chr2	184877440	184886061	+	noncoding	ZNF804A	protein_coding	SENSE	ENSG00000170396	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.1t	L1	L1	L1FLnI	chr2	184920992	184932624	-	noncoding	ZNF804A	protein_coding	ANTISENSE	ENSG00000170396	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.1u	L1	L1	L1FLnI	chr2	184923540	184932624	-	noncoding	ZNF804A	protein_coding	ANTISENSE	ENSG00000170396	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.1v	L1	L1	L1FLnI	chr2	185101733	185111038	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF804A	ENSG00000170396	162241	AC009315.1	ENSG00000286797	314025	None	None
L1FLnI_2q32.1w	L1	L1	L1FLnI	chr2	185288438	185297015	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF804A	ENSG00000170396	348946	AC009315.1	ENSG00000286797	128048	None	None
L1FLnI_2q32.1x	L1	L1	L1FLnI	chr2	185418936	185428962	-	coding	AC009315.1	lncRNA	ANTISENSE	ENSG00000286797	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:185425433-185425458
L1FLnI_2q32.1y	L1	L1	L1FLnI	chr2	185585389	185595408	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	FSIP2-AS1	ENSG00000231646	56966	AC080125.1	ENSG00000225406	37571	None	None
L1FLnI_2q32.1z	L1	L1	L1FLnI	chr2	185681870	185691980	-	coding	FSIP2-AS1	lncRNA	SENSE	ENSG00000231646	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.1aa	L1	L1	L1FLnI	chr2	185841222	185851256	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC097500.1	ENSG00000287129	99213	FSIP2	ENSG00000188738	7932	None	None
L1FLnI_2q32.1ba	L1	L1	L1FLnI	chr2	185861099	185871119	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FSIP2	ENSG00000188738	27809	AC097500.1	ENSG00000287129	79350	None	None
L1FLnI_2q32.1ca	L1	L1	L1FLnI	chr2	185861099	185871116	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FSIP2	ENSG00000188738	27809	AC097500.1	ENSG00000287129	79353	None	None
L1FLnI_2q32.1da	L1	L1	L1FLnI	chr2	186006090	186015412	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL21P32	ENSG00000224019	49027	LINC01473	ENSG00000237877	17472	None	None
L1FLnI_2q32.1ea	L1	L1	L1FLnI	chr2	186226825	186236962	+	coding	LINC01473	lncRNA	ANTISENSE	ENSG00000237877	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.1fa	L1	L1	L1FLnI	chr2	186309577	186319450	+	noncoding	LINC01473	lncRNA	ANTISENSE	ENSG00000237877	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.1ga	L1	L1	L1FLnI	chr2	186781431	186791977	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FAM171B	ENSG00000144369	15472	ZSWIM2	ENSG00000163012	35498	None	None
L1FLnI_2q32.1ha	L1	L1	L1FLnI	chr2	186782761	186791977	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FAM171B	ENSG00000144369	16802	ZSWIM2	ENSG00000163012	35498	None	None
L1FLnI_2q32.1ia	L1	L1	L1FLnI	chr2	186789223	186799599	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM171B	ENSG00000144369	23264	ZSWIM2	ENSG00000163012	27876	None	None
L1FLnI_2q32.1ja	L1	L1	L1FLnI	chr2	186808276	186817671	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM171B	ENSG00000144369	42317	ZSWIM2	ENSG00000163012	9804	None	None
L1FLnI_2q32.1ka	L1	L1	L1FLnI	chr2	186808697	186817671	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM171B	ENSG00000144369	42738	ZSWIM2	ENSG00000163012	9804	None	None
L1FLnI_2q32.1la	L1	L1	L1FLnI	chr2	186895581	186905775	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC018735.1	ENSG00000226553	96101	ZSWIM2	ENSG00000163012	46373	None	None
L1FLnI_2q32.1ma	L1	L1	L1FLnI	chr2	187528781	187539242	+	noncoding	AC007319.1,TFPI	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000224063,ENSG00000003436	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.1na	L1	L1	L1FLnI	chr2	187753539	187763761	-	noncoding	LINC01090	lncRNA	SENSE	ENSG00000231689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.1oa	L1	L1	L1FLnI	chr2	187992618	188002714	+	noncoding	LINC01090	lncRNA	ANTISENSE	ENSG00000231689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.1pa	L1	L1	L1FLnI	chr2	188120063	188130037	+	coding	LINC01090	lncRNA	ANTISENSE	ENSG00000231689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.1qa	L1	L1	L1FLnI	chr2	188389124	188400736	-	noncoding	GULP1	protein_coding	ANTISENSE	ENSG00000144366	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.1ra	L1	L1	L1FLnI	chr2	188469100	188478311	-	noncoding	GULP1	protein_coding	ANTISENSE	ENSG00000144366	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.2a	L1	L1	L1FLnI	chr2	188550614	188559278	-	noncoding	GULP1	protein_coding	ANTISENSE	ENSG00000144366	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.2b	L1	L1	L1FLnI	chr2	188858494	188868902	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092598.1	ENSG00000223523	19049	COL3A1	ENSG00000168542	105471	None	None
L1FLnI_2q32.2c	L1	L1	L1FLnI	chr2	189315692	189325824	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	KRT18P19	ENSG00000213601	3725	WDR75	ENSG00000115368	115622	None	None
L1FLnI_2q32.2d	L1	L1	L1FLnI	chr2	189351308	189361684	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	WDR75	ENSG00000115368	79762	KRT18P19	ENSG00000213601	39341	None	None
L1FLnI_2q32.2e	L1	L1	L1FLnI	chr2	189426881	189436665	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	KRT18P19	ENSG00000213601	114914	WDR75	ENSG00000115368	4781	None	None
L1FLnI_2q32.2f	L1	L1	L1FLnI	chr2	189970488	189980625	-	coding	C2orf88	protein_coding	ANTISENSE	ENSG00000187699	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.2g	L1	L1	L1FLnI	chr2	190467606	190477709	+	coding	MFSD6	protein_coding	SENSE	ENSG00000151690	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:190469486-190469506,chr2:190469909-190469925,chr2:190469928-190469939,chr2:190469944-190469955,chr2:190470072-190470080
L1FLnI_2q32.2h	L1	L1	L1FLnI	chr2	190771752	190781901	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC005540.1	ENSG00000235852	98896	AC006460.1	ENSG00000228509	63036	None	None
L1FLnI_2q32.2i	L1	L1	L1FLnI	chr2	191089078	191099269	+	noncoding	STAT4	protein_coding	ANTISENSE	ENSG00000138378	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.3a	L1	L1	L1FLnI	chr2	191758351	191768376	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC114778.2	ENSG00000288582	19757	AC098872.1	ENSG00000225884	24421	None	None
L1FLnI_2q32.3b	L1	L1	L1FLnI	chr2	192267906	192277950	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC062039.1	ENSG00000229395	351969	TMEFF2	ENSG00000144339	72973	None	None
L1FLnI_2q32.3c	L1	L1	L1FLnI	chr2	192267926	192277950	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC062039.1	ENSG00000229395	351969	TMEFF2	ENSG00000144339	72993	None	None
L1FLnI_2q32.3d	L1	L1	L1FLnI	chr2	192520672	192531140	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEFF2	ENSG00000144339	325739	AC062039.1	ENSG00000229395	98779	None	None
L1FLnI_2q32.3e	L1	L1	L1FLnI	chr2	192630706	192641260	+	noncoding	AC062039.1	lncRNA	SENSE	ENSG00000229395	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.3f	L1	L1	L1FLnI	chr2	192924669	192934791	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC096647.1	ENSG00000286358	235913	PCGEM1	ENSG00000227418	147770	None	None
L1FLnI_2q32.3g	L1	L1	L1FLnI	chr2	193008486	193017501	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PCGEM1	ENSG00000227418	231587	AC096647.1	ENSG00000286358	153203	None	None
L1FLnI_2q32.3h	L1	L1	L1FLnI	chr2	193032011	193041444	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC096647.1	ENSG00000286358	129260	PCGEM1	ENSG00000227418	255112	None	None
L1FLnI_2q32.3i	L1	L1	L1FLnI	chr2	193211922	193221948	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092638.1	ENSG00000232658	34535	AC096647.1	ENSG00000286358	39157	None	None
L1FLnI_2q32.3j	L1	L1	L1FLnI	chr2	193284439	193293293	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC074290.1	ENSG00000224219	437262	AC092638.2	ENSG00000235218	6825	None	None
L1FLnI_2q32.3k	L1	L1	L1FLnI	chr2	193538372	193548991	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092638.2	ENSG00000235218	260758	AC074290.1	ENSG00000224219	181564	None	None
L1FLnI_2q32.3l	L1	L1	L1FLnI	chr2	193626189	193634807	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092638.2	ENSG00000235218	348575	AC074290.1	ENSG00000224219	95748	None	None
L1FLnI_2q32.3m	L1	L1	L1FLnI	chr2	193637471	193646240	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074290.1	ENSG00000224219	84315	AC092638.2	ENSG00000235218	359857	None	None
L1FLnI_2q32.3n	L1	L1	L1FLnI	chr2	193704401	193714434	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC074290.1	ENSG00000224219	16121	AC092638.2	ENSG00000235218	426787	None	None
L1FLnI_2q32.3o	L1	L1	L1FLnI	chr2	193704415	193714434	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC074290.1	ENSG00000224219	16121	AC092638.2	ENSG00000235218	426801	None	None
L1FLnI_2q32.3p	L1	L1	L1FLnI	chr2	193830370	193840504	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC074290.2	ENSG00000286868	27218	AC074290.1	ENSG00000224219	99681	None	None
L1FLnI_2q32.3q	L1	L1	L1FLnI	chr2	194024833	194035550	+	noncoding	AC068135.1	processed_pseudogene	SENSE	ENSG00000224670	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.3r	L1	L1	L1FLnI	chr2	194024833	194035157	+	noncoding	AC068135.1	processed_pseudogene	SENSE	ENSG00000224670	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.3s	L1	L1	L1FLnI	chr2	194067955	194077438	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GLULP6	ENSG00000215043	51916	AC068135.1	ENSG00000224670	39791	None	None
L1FLnI_2q32.3t	L1	L1	L1FLnI	chr2	194201489	194210710	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01821	ENSG00000225539	133480	HNRNPA1P47	ENSG00000236695	13180	None	None
L1FLnI_2q32.3u	L1	L1	L1FLnI	chr2	194201489	194210498	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01821	ENSG00000225539	133692	HNRNPA1P47	ENSG00000236695	13180	None	None
L1FLnI_2q32.3v	L1	L1	L1FLnI	chr2	194635631	194645411	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073973.1	ENSG00000286539	23486	AC013456.1	ENSG00000276123	12965	None	None
L1FLnI_2q32.3w	L1	L1	L1FLnI	chr2	195067023	195077043	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104823.1	ENSG00000224099	371489	AC010983.1	ENSG00000235056	40653	None	None
L1FLnI_2q32.3x	L1	L1	L1FLnI	chr2	195070740	195080279	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC010983.1	ENSG00000235056	44370	AC104823.1	ENSG00000224099	368253	None	None
L1FLnI_2q32.3y	L1	L1	L1FLnI	chr2	195224937	195234959	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC010983.1	ENSG00000235056	198567	AC104823.1	ENSG00000224099	213573	None	None
L1FLnI_2q32.3z	L1	L1	L1FLnI	chr2	195264178	195273345	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104823.1	ENSG00000224099	175187	AC010983.1	ENSG00000235056	237808	None	None
L1FLnI_2q32.3aa	L1	L1	L1FLnI	chr2	195372725	195382741	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104823.1	ENSG00000224099	65791	AC010983.1	ENSG00000235056	346355	None	None
L1FLnI_2q32.3ba	L1	L1	L1FLnI	chr2	195519504	195529595	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC064834.1	ENSG00000271893	3805	LINC01825	ENSG00000223466	3350	None	None
L1FLnI_2q32.3ca	L1	L1	L1FLnI	chr2	195740385	195750492	+	coding	DNAH7	protein_coding	ANTISENSE	ENSG00000118997	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.3da	L1	L1	L1FLnI	chr2	195756479	195766667	+	noncoding	DNAH7	protein_coding	ANTISENSE	ENSG00000118997	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.3ea	L1	L1	L1FLnI	chr2	195971536	195980599	+	noncoding	DNAH7	protein_coding	ANTISENSE	ENSG00000118997	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q32.3fa	L1	L1	L1FLnI	chr2	196085703	196095891	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	DNAH7	ENSG00000118997	16866	STK17B	ENSG00000081320	37692	None	None
L1FLnI_2q32.3ga	L1	L1	L1FLnI	chr2	196520986	196531000	-	coding	HECW2	protein_coding	SENSE	ENSG00000138411	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:196521277-196521286
L1FLnI_2q33.1a	L1	L1	L1FLnI	chr2	196704057	196714139	-	coding	CCDC150	protein_coding	ANTISENSE	ENSG00000144395	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	chr2:196713127-196713136
L1FLnI_2q33.1b	L1	L1	L1FLnI	chr2	196752141	196761836	-	coding	CCDC150	protein_coding	ANTISENSE	ENSG00000144395	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr2:196758295-196758521,chr2:196760291-196760575	None
L1FLI_2q33.1	L1	L1	L1FLI	chr2	196904586	196912633	+	coding	PGAP1	protein_coding	ANTISENSE	ENSG00000197121	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.1c	L1	L1	L1FLnI	chr2	197058988	197068874	+	coding	ANKRD44	protein_coding	ANTISENSE	ENSG00000065413	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.1d	L1	L1	L1FLnI	chr2	197634237	197644261	-	coding	RFTN2,AC020550.2	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000162944,ENSG00000287858	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.1e	L1	L1	L1FLnI	chr2	197634248	197644261	-	coding	RFTN2,AC020550.2	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000162944,ENSG00000287858	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.1f	L1	L1	L1FLnI	chr2	197687034	197697061	-	coding	AC011997.1	lncRNA	ANTISENSE	ENSG00000222017	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.1g	L1	L1	L1FLnI	chr2	197725464	197735464	+	coding	AC011997.1,BOLL	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000222017,ENSG00000152430	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.1h	L1	L1	L1FLnI	chr2	197744455	197754794	+	noncoding	AC011997.1,BOLL	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000222017,ENSG00000152430	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.1i	L1	L1	L1FLnI	chr2	198014430	198024909	+	noncoding	PLCL1	protein_coding	SENSE	ENSG00000115896	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.1j	L1	L1	L1FLnI	chr2	198192762	198202915	+	coding	PLCL1	protein_coding	SENSE	ENSG00000115896	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.1k	L1	L1	L1FLnI	chr2	198680962	198691391	+	noncoding	AC019330.1	lncRNA	ANTISENSE	ENSG00000225421	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.1l	L1	L1	L1FLnI	chr2	199024987	199035098	+	noncoding	AC020718.1	lncRNA	ANTISENSE	ENSG00000231557	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.1m	L1	L1	L1FLnI	chr2	199151118	199159963	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018717.1	ENSG00000230407	41030	RNU7-147P	ENSG00000238698	31096	None	None
L1FLnI_2q33.1n	L1	L1	L1FLnI	chr2	199239110	199249231	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SATB2	ENSG00000119042	20269	RNU7-147P	ENSG00000238698	47990	None	None
L1FLnI_2q33.1o	L1	L1	L1FLnI	chr2	199722706	199731223	-	noncoding	LINC01877	lncRNA	ANTISENSE	ENSG00000238217	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.1p	L1	L1	L1FLnI	chr2	199884275	199893235	+	noncoding	AC097717.1	lncRNA	ANTISENSE	ENSG00000232732	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.1q	L1	L1	L1FLnI	chr2	200050907	200062287	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAIP1	ENSG00000162972	42367	AC004464.1	ENSG00000287027	24583	chr2:200056062-200056709	None
L1FLnI_2q33.1r	L1	L1	L1FLnI	chr2	200560548	200570711	-	coding	SGO2	protein_coding	ANTISENSE	ENSG00000163535	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.1s	L1	L1	L1FLnI	chr2	200642924	200653120	-	noncoding	AOX1	protein_coding	ANTISENSE	ENSG00000138356	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr2:200648996-200649242	None
L1FLnI_2q33.1t	L1	L1	L1FLnI	chr2	201287046	201297170	+	coding	CASP8,FLACC1	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000064012,ENSG00000155749	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.1u	L1	L1	L1FLnI	chr2	201296447	201306598	+	noncoding	FLACC1	protein_coding	ANTISENSE	ENSG00000155749	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.1v	L1	L1	L1FLnI	chr2	201309196	201319236	+	noncoding	FLACC1	protein_coding	ANTISENSE	ENSG00000155749	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.1w	L1	L1	L1FLnI	chr2	201365815	201376274	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FLACC1	ENSG00000155749	8417	TRAK2	ENSG00000115993	933	None	None
L1FLnI_2q33.1x	L1	L1	L1FLnI	chr2	201366228	201376274	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FLACC1	ENSG00000155749	8830	TRAK2	ENSG00000115993	933	None	None
L1FLnI_2q33.1y	L1	L1	L1FLnI	chr2	201589470	201598682	-	coding	C2CD6	protein_coding	SENSE	ENSG00000155754	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.1z	L1	L1	L1FLnI	chr2	201589486	201598682	-	coding	C2CD6	protein_coding	SENSE	ENSG00000155754	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.1aa	L1	L1	L1FLnI	chr2	201609102	201619221	+	coding	C2CD6	protein_coding	ANTISENSE	ENSG00000155754	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:201619144-201619185
L1FLnI_2q33.3a	L1	L1	L1FLnI	chr2	204419676	204428485	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC106901.1	ENSG00000225304	39884	AC016903.1	ENSG00000236634	41591	None	None
L1FLnI_2q33.3b	L1	L1	L1FLnI	chr2	204990574	205000606	-	coding	PARD3B	protein_coding	ANTISENSE	ENSG00000116117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.3c	L1	L1	L1FLnI	chr2	205514336	205524043	-	noncoding	PARD3B	protein_coding	ANTISENSE	ENSG00000116117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.3d	L1	L1	L1FLnI	chr2	206410580	206419710	-	coding	AC017081.1,HNRNPA1P51	processed_pseudogene,processed_pseudogene	SENSE,SENSE	ENSG00000180105,ENSG00000234491	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.3e	L1	L1	L1FLnI	chr2	206491319	206500152	+	coding	ADAM23	protein_coding	SENSE	ENSG00000114948	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.3f	L1	L1	L1FLnI	chr2	206893709	206903850	-	noncoding	AC008269.1	lncRNA	ANTISENSE	ENSG00000229321	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.3g	L1	L1	L1FLnI	chr2	206904537	206914552	+	coding	AC008269.1	lncRNA	SENSE	ENSG00000229321	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q33.3h	L1	L1	L1FLnI	chr2	206997412	207007432	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CPO	ENSG00000144410	27938	KLF7	ENSG00000118263	66705	None	None
L1FLnI_2q33.3i	L1	L1	L1FLnI	chr2	207340670	207351076	+	noncoding	AC009226.1	lncRNA	ANTISENSE	ENSG00000223725	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34a	L1	L1	L1FLnI	chr2	208519381	208529485	-	noncoding	PTH2R,AC019185.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000144407,ENSG00000231896	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34b	L1	L1	L1FLnI	chr2	208679854	208690012	-	noncoding	PTH2R	protein_coding	ANTISENSE	ENSG00000144407	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34c	L1	L1	L1FLnI	chr2	208733260	208743417	-	noncoding	PTH2R	protein_coding	ANTISENSE	ENSG00000144407	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34d	L1	L1	L1FLnI	chr2	208745992	208756145	-	coding	PTH2R	protein_coding	ANTISENSE	ENSG00000144407	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34e	L1	L1	L1FLnI	chr2	208757480	208766784	+	coding	PTH2R	protein_coding	SENSE	ENSG00000144407	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34f	L1	L1	L1FLnI	chr2	208757480	208766783	+	coding	PTH2R	protein_coding	SENSE	ENSG00000144407	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34g	L1	L1	L1FLnI	chr2	208780758	208790924	+	coding	PTH2R	protein_coding	SENSE	ENSG00000144407	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34h	L1	L1	L1FLnI	chr2	208797142	208807291	+	coding	PTH2R	protein_coding	SENSE	ENSG00000144407	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34i	L1	L1	L1FLnI	chr2	208808123	208818148	+	coding	PTH2R	protein_coding	SENSE	ENSG00000144407	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34j	L1	L1	L1FLnI	chr2	208828069	208838233	+	coding	PTH2R	protein_coding	SENSE	ENSG00000144407	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34k	L1	L1	L1FLnI	chr2	208891176	208900579	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC109824.1	ENSG00000287662	3033	RNA5SP117	ENSG00000202164	19968	None	None
L1FLnI_2q34l	L1	L1	L1FLnI	chr2	208920762	208929622	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSPA8P6	ENSG00000235864	142975	RNA5SP117	ENSG00000202164	98	None	None
L1FLnI_2q34m	L1	L1	L1FLnI	chr2	209017686	209026794	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP117	ENSG00000202164	97022	HSPA8P6	ENSG00000235864	45803	None	None
L1FLnI_2q34n	L1	L1	L1FLnI	chr2	209125031	209135054	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HSPA8P6	ENSG00000235864	50883	CRYGFP	ENSG00000232799	10187	None	None
L1FLnI_2q34o	L1	L1	L1FLnI	chr2	209125031	209135082	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HSPA8P6	ENSG00000235864	50883	CRYGFP	ENSG00000232799	10159	None	None
L1FLnI_2q34p	L1	L1	L1FLnI	chr2	209160138	209169553	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CRYGFP	ENSG00000232799	12451	MEAF6P1	ENSG00000240286	9251	None	None
L1FLnI_2q34q	L1	L1	L1FLnI	chr2	209211993	209220844	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MEAF6P1	ENSG00000240286	29975	AC016743.1	ENSG00000286249	133133	None	None
L1FLnI_2q34r	L1	L1	L1FLnI	chr2	209238462	209247998	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MEAF6P1	ENSG00000240286	56444	AC016743.1	ENSG00000286249	105979	None	None
L1FLnI_2q34s	L1	L1	L1FLnI	chr2	209257936	209268027	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MEAF6P1	ENSG00000240286	75918	AC016743.1	ENSG00000286249	85950	None	None
L1FLnI_2q34t	L1	L1	L1FLnI	chr2	209484497	209494940	+	coding	MAP2	protein_coding	SENSE	ENSG00000078018	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34u	L1	L1	L1FLnI	chr2	209745670	209755708	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	UNC80	ENSG00000144406	16124	MAP2	ENSG00000078018	11552	None	None
L1FLnI_2q34v	L1	L1	L1FLnI	chr2	209745682	209755708	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	UNC80	ENSG00000144406	16124	MAP2	ENSG00000078018	11564	None	None
L1FLnI_2q34w	L1	L1	L1FLnI	chr2	209751474	209760893	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAP2	ENSG00000078018	17356	UNC80	ENSG00000144406	10939	None	None
L1FLnI_2q34x	L1	L1	L1FLnI	chr2	209858558	209868774	-	coding	UNC80	protein_coding	ANTISENSE	ENSG00000144406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34y	L1	L1	L1FLnI	chr2	210177585	210187964	+	noncoding	AC006994.2,ACADL	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000279317,ENSG00000115361	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34z	L1	L1	L1FLnI	chr2	210347125	210357264	+	coding	LANCL1-AS1	lncRNA	SENSE	ENSG00000234281	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34aa	L1	L1	L1FLnI	chr2	210400742	210411154	-	noncoding	LANCL1-AS1	lncRNA	ANTISENSE	ENSG00000234281	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34ba	L1	L1	L1FLnI	chr2	210442421	210451984	+	noncoding	LANCL1-AS1,LANCL1	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000234281,ENSG00000115365	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34ca	L1	L1	L1FLnI	chr2	210501922	210512044	+	coding	CPS1	protein_coding	SENSE	ENSG00000021826	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34da	L1	L1	L1FLnI	chr2	211215822	211225844	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC012491.1	ENSG00000271074	110090	AC013404.1	ENSG00000231017	73097	None	None
L1FLnI_2q34ea	L1	L1	L1FLnI	chr2	211521440	211531107	+	coding	ERBB4	protein_coding	ANTISENSE	ENSG00000178568	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34fa	L1	L1	L1FLnI	chr2	211885038	211895071	+	coding	ERBB4	protein_coding	ANTISENSE	ENSG00000178568	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34ga	L1	L1	L1FLnI	chr2	212051326	212061469	+	coding	ERBB4	protein_coding	ANTISENSE	ENSG00000178568	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34ha	L1	L1	L1FLnI	chr2	212051326	212061459	+	coding	ERBB4	protein_coding	ANTISENSE	ENSG00000178568	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34ia	L1	L1	L1FLnI	chr2	212654092	212663531	-	noncoding	AC093865.1	lncRNA	SENSE	ENSG00000273118	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34ja	L1	L1	L1FLnI	chr2	212654212	212663531	-	noncoding	AC093865.1	lncRNA	SENSE	ENSG00000273118	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34ka	L1	L1	L1FLnI	chr2	212753151	212763302	+	noncoding	AC093865.1	lncRNA	ANTISENSE	ENSG00000273118	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34la	L1	L1	L1FLnI	chr2	212781630	212791768	+	coding	AC093865.1	lncRNA	ANTISENSE	ENSG00000273118	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34ma	L1	L1	L1FLnI	chr2	212872223	212882388	+	coding	AC093865.1	lncRNA	ANTISENSE	ENSG00000273118	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34na	L1	L1	L1FLnI	chr2	213343880	213352406	-	coding	SPAG16	protein_coding	ANTISENSE	ENSG00000144451	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34oa	L1	L1	L1FLnI	chr2	213353401	213363404	-	noncoding	SPAG16	protein_coding	ANTISENSE	ENSG00000144451	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34pa	L1	L1	L1FLnI	chr2	213566733	213576762	-	coding	SPAG16	protein_coding	ANTISENSE	ENSG00000144451	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34qa	L1	L1	L1FLnI	chr2	213823156	213834089	-	noncoding	SPAG16	protein_coding	ANTISENSE	ENSG00000144451	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34ra	L1	L1	L1FLnI	chr2	214271801	214281951	-	noncoding	SPAG16,AC068051.1,RPL5P8	protein_coding,lncRNA,processed_pseudogene	ANTISENSE,SENSE,SENSE	ENSG00000144451,ENSG00000197585,ENSG00000213917	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q34sa	L1	L1	L1FLnI	chr2	214304216	214313288	-	noncoding	SPAG16,AC068051.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000144451,ENSG00000197585	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q35a	L1	L1	L1FLnI	chr2	214680298	214690305	+	coding	AC068051.1	lncRNA	ANTISENSE	ENSG00000197585	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q35b	L1	L1	L1FLnI	chr2	215123281	215132846	-	noncoding	ABCA12	protein_coding	SENSE	ENSG00000144452	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q35c	L1	L1	L1FLnI	chr2	215216745	215226831	+	coding	AC092844.1	lncRNA	ANTISENSE	ENSG00000286836	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q35d	L1	L1	L1FLnI	chr2	215249473	215259613	+	coding	AC092844.1	lncRNA	ANTISENSE	ENSG00000286836	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q35e	L1	L1	L1FLnI	chr2	215629459	215639529	-	noncoding	AC012668.3,LINC00607	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000237525,ENSG00000235770	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q35f	L1	L1	L1FLnI	chr2	215815523	215825977	+	noncoding	LINC00607	lncRNA	ANTISENSE	ENSG00000235770	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q35g	L1	L1	L1FLnI	chr2	215984604	215995068	+	coding	MREG	protein_coding	ANTISENSE	ENSG00000118242	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q35h	L1	L1	L1FLnI	chr2	216451217	216461342	+	coding	SMARCAL1	protein_coding	SENSE	ENSG00000138375	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q35i	L1	L1	L1FLnI	chr2	216742530	216752525	+	noncoding	AC007563.2	lncRNA	SENSE	ENSG00000236886	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q35j	L1	L1	L1FLnI	chr2	216977260	216986654	-	noncoding	AC007563.2	lncRNA	ANTISENSE	ENSG00000236886	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q35k	L1	L1	L1FLnI	chr2	217345031	217355764	-	noncoding	DIRC3	lncRNA	SENSE	ENSG00000231672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q35l	L1	L1	L1FLnI	chr2	218102107	218112183	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CXCR2	ENSG00000180871	13106	RUFY4	ENSG00000188282	11526	None	None
L1FLnI_2q35m	L1	L1	L1FLnI	chr2	219813011	219823159	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01803	ENSG00000228909	80741	LINC02832	ENSG00000227308	75074	None	None
L1FLnI_2q35n	L1	L1	L1FLnI	chr2	219928320	219938340	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC008281.1	ENSG00000286199	15486	AC009310.1	ENSG00000225911	110482	None	None
L1FLnI_2q35o	L1	L1	L1FLnI	chr2	219928320	219938338	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC008281.1	ENSG00000286199	15486	AC009310.1	ENSG00000225911	110484	None	None
L1FLnI_2q35p	L1	L1	L1FLnI	chr2	220381719	220391843	-	coding	AC019211.1	lncRNA	ANTISENSE	ENSG00000239498	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q35q	L1	L1	L1FLnI	chr2	220406564	220416484	-	noncoding	AC019211.1	lncRNA	ANTISENSE	ENSG00000239498	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q35r	L1	L1	L1FLnI	chr2	220406718	220416484	-	noncoding	AC019211.1	lncRNA	ANTISENSE	ENSG00000239498	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q36.1a	L1	L1	L1FLnI	chr2	221981064	221991086	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HSPA9P1	ENSG00000226666	17299	RPL23AP28	ENSG00000226331	53439	None	None
L1FLnI_2q36.1b	L1	L1	L1FLnI	chr2	222149103	222159132	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PAX3	ENSG00000135903	40756	RPL23AP28	ENSG00000226331	104109	None	None
L1FLnI_2q36.1c	L1	L1	L1FLnI	chr2	222580879	222591026	+	noncoding	FARSB	protein_coding	ANTISENSE	ENSG00000116120	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q36.1d	L1	L1	L1FLnI	chr2	223009089	223018514	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC013476.1	ENSG00000278083	62701	KCNE4	ENSG00000152049	33300	None	None
L1FLnI_2q36.1e	L1	L1	L1FLnI	chr2	223287098	223297586	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HIGD1AP4	ENSG00000233299	100681	RN7SL807P	ENSG00000243125	38304	None	None
L1FLnI_2q36.1f	L1	L1	L1FLnI	chr2	223327012	223337153	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL807P	ENSG00000243125	78218	HIGD1AP4	ENSG00000233299	61114	None	None
L1FLnI_2q36.1g	L1	L1	L1FLnI	chr2	223392454	223400973	-	noncoding	HIGD1AP4	processed_pseudogene	SENSE	ENSG00000233299	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q36.2	L1	L1	L1FLnI	chr2	224481338	224490248	+	noncoding	CUL3	protein_coding	ANTISENSE	ENSG00000036257	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q36.3a	L1	L1	L1FLnI	chr2	225253814	225264864	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DOCK10	ENSG00000135905	211369	NYAP2	ENSG00000144460	134846	None	None
L1FLnI_2q36.3b	L1	L1	L1FLnI	chr2	225540132	225551396	-	noncoding	NYAP2	protein_coding	ANTISENSE	ENSG00000144460	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q36.3c	L1	L1	L1FLnI	chr2	225820777	225831244	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC016717.3	ENSG00000279015	58665	AC068138.1	ENSG00000230621	161737	None	None
L1FLnI_2q36.3d	L1	L1	L1FLnI	chr2	225820777	225831257	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC016717.3	ENSG00000279015	58665	AC068138.1	ENSG00000230621	161724	None	None
L1FLnI_2q36.3e	L1	L1	L1FLnI	chr2	225894490	225903751	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016717.3	ENSG00000279015	132378	AC068138.1	ENSG00000230621	89230	None	None
L1FLnI_2q36.3f	L1	L1	L1FLnI	chr2	226087861	226097142	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068138.1	ENSG00000230621	94664	AC062015.1	ENSG00000235070	82902	None	None
L1FLnI_2q36.3g	L1	L1	L1FLnI	chr2	226103778	226113917	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC068138.1	ENSG00000230621	110581	AC062015.1	ENSG00000235070	66127	None	None
L1FLnI_2q36.3h	L1	L1	L1FLnI	chr2	226450131	226459269	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC062015.1	ENSG00000235070	264760	MIR5702	ENSG00000263363	199441	None	None
L1FLnI_2q36.3i	L1	L1	L1FLnI	chr2	226585569	226596147	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR5702	ENSG00000263363	62563	AC062015.1	ENSG00000235070	400198	None	None
L1FLnI_2q36.3j	L1	L1	L1FLnI	chr2	227061387	227071389	+	coding	COL4A4	protein_coding	ANTISENSE	ENSG00000081052	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q36.3k	L1	L1	L1FLnI	chr2	227061387	227071402	+	coding	COL4A4	protein_coding	ANTISENSE	ENSG00000081052	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q36.3l	L1	L1	L1FLnI	chr2	228001082	228010566	-	coding	SPHKAP	protein_coding	SENSE	ENSG00000153820	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q36.3m	L1	L1	L1FLnI	chr2	228027396	228037543	+	coding	SPHKAP	protein_coding	ANTISENSE	ENSG00000153820	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr2:228030511-228030741	None
L1FLnI_2q36.3n	L1	L1	L1FLnI	chr2	228198640	228208799	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC074019.1	ENSG00000203387	143321	SPHKAP	ENSG00000153820	16953	None	None
L1FLnI_2q36.3o	L1	L1	L1FLnI	chr2	228228502	228238015	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC074019.1	ENSG00000203387	114105	SPHKAP	ENSG00000153820	46815	None	None
L1FLnI_2q36.3p	L1	L1	L1FLnI	chr2	228228527	228238015	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC074019.1	ENSG00000203387	114105	SPHKAP	ENSG00000153820	46840	None	None
L1FLnI_2q36.3q	L1	L1	L1FLnI	chr2	228419489	228429524	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01807	ENSG00000232023	45700	AC009410.1	ENSG00000286772	39716	None	None
L1FLnI_2q36.3r	L1	L1	L1FLnI	chr2	228455821	228464618	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01807	ENSG00000232023	10606	AC009410.1	ENSG00000286772	76048	chr2:228456754-228457114	None
L1FLnI_2q36.3s	L1	L1	L1FLnI	chr2	228564759	228574781	+	coding	LINC01807	lncRNA	ANTISENSE	ENSG00000232023	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q36.3t	L1	L1	L1FLnI	chr2	228752195	228762217	+	coding	LINC01807,RPL7L1P10	lncRNA,processed_pseudogene	ANTISENSE,SENSE	ENSG00000232023,ENSG00000237322	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q37.1a	L1	L1	L1FLnI	chr2	230111573	230121752	-	noncoding	AC009950.1	lncRNA	ANTISENSE	ENSG00000225963	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q37.1b	L1	L1	L1FLnI	chr2	230259199	230269345	-	noncoding	SP140	protein_coding	ANTISENSE	ENSG00000079263	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q37.1c	L1	L1	L1FLnI	chr2	230260707	230269345	-	noncoding	SP140	protein_coding	ANTISENSE	ENSG00000079263	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q37.1d	L1	L1	L1FLnI	chr2	230336571	230346013	-	coding	SP140L	protein_coding	ANTISENSE	ENSG00000185404	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q37.1e	L1	L1	L1FLnI	chr2	230521945	230532052	+	coding	SP100,AC010149.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000067066,ENSG00000235419	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:230522497-230522501
L1FLnI_2q37.1f	L1	L1	L1FLnI	chr2	232031003	232041491	-	noncoding	DIS3L2	protein_coding	ANTISENSE	ENSG00000144535	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr2:232039392-232039413
L1FLnI_2q37.1g	L1	L1	L1FLnI	chr2	232148698	232158729	-	coding	DIS3L2	protein_coding	ANTISENSE	ENSG00000144535	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q37.1h	L1	L1	L1FLnI	chr2	232176308	232185109	-	coding	DIS3L2	protein_coding	ANTISENSE	ENSG00000144535	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q37.1i	L1	L1	L1FLnI	chr2	232351740	232361745	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ECEL1P3	ENSG00000230122	431	AC068134.4	ENSG00000275157	6831	None	None
L1FLnI_2q37.1j	L1	L1	L1FLnI	chr2	233577341	233587370	-	coding	UGT1A12P	unprocessed_pseudogene	ANTISENSE	ENSG00000228949	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q37.1k	L1	L1	L1FLnI	chr2	233611561	233620114	-	noncoding	UGT1A8	protein_coding	ANTISENSE	ENSG00000242366	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:233617626-233617634,chr2:233617695-233617700
L1FLnI_2q37.1l	L1	L1	L1FLnI	chr2	233630340	233638898	-	noncoding	UGT1A8,UGT1A10	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000242366,ENSG00000242515	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr2:233636446-233636449,chr2:233636510-233636515,chr2:233636747-233636757,chr2:233636761-233636762,chr2:233636791-233636800,chr2:233637062-233637070
L1FLnI_2q37.1m	L1	L1	L1FLnI	chr2	233730787	233741184	-	noncoding	UGT1A8,UGT1A10,UGT1A9,UGT1A7,UGT1A6,UGT1A5,UGT1A4,UGT1A3,AC114812.3	protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,unprocessed_pseudogene	ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000242366,ENSG00000242515,ENSG00000241119,ENSG00000244122,ENSG00000167165,ENSG00000240224,ENSG00000244474,ENSG00000243135,ENSG00000248114	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q37.2a	L1	L1	L1FLnI	chr2	234771988	234782143	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104394.1	ENSG00000278593	26382	AC010148.1	ENSG00000235726	21665	None	None
L1FLnI_2q37.2b	L1	L1	L1FLnI	chr2	234884891	234894919	+	coding	AC010148.1	lncRNA	ANTISENSE	ENSG00000235726	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q37.2c	L1	L1	L1FLnI	chr2	236383168	236393189	-	coding	IQCA1,IQCA1-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000132321,ENSG00000232893	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_2q37.3a	L1	L1	L1FLnI	chr2	237842971	237853065	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAMP1	ENSG00000132329	5828	RBM44	ENSG00000177483	163	None	chr2:237851849-237851859
L1FLnI_2q37.3b	L1	L1	L1FLnI	chr2	240034181	240043887	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR6B3	ENSG00000178586	1190	OR6B2	ENSG00000182083	3725	None	None
L1FLnI_2q37.3c	L1	L1	L1FLnI	chr2	240273330	240284789	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC124861.1	ENSG00000227479	17295	AC124861.2	ENSG00000276366	4427	None	None
L1FLnI_2q37.3d	L1	L1	L1FLnI	chr2	240540996	240551022	+	coding	ANKMY1	protein_coding	ANTISENSE	ENSG00000144504	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.3a	L1	L1	L1FLnI	chr3	367163	377553	-	noncoding	CHL1,CHL1-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000134121,ENSG00000234661	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.3b	L1	L1	L1FLnI	chr3	805878	815906	+	coding	LINC01266	lncRNA	SENSE	ENSG00000224957	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.3c	L1	L1	L1FLnI	chr3	805878	815915	+	coding	LINC01266	lncRNA	SENSE	ENSG00000224957	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.3d	L1	L1	L1FLnI	chr3	812703	823118	+	coding	LINC01266	lncRNA	SENSE	ENSG00000224957	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.3e	L1	L1	L1FLnI	chr3	897353	905916	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090044.1	ENSG00000224239	39262	AC087430.1	ENSG00000235158	102219	None	None
L1FLnI_3p26.3f	L1	L1	L1FLnI	chr3	1057389	1067145	-	noncoding	RN7SL120P	misc_RNA	SENSE	ENSG00000244169	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.3g	L1	L1	L1FLnI	chr3	1384062	1394071	+	coding	CNTN6	protein_coding	SENSE	ENSG00000134115	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.3h	L1	L1	L1FLnI	chr3	1473993	1484125	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CNTN6	ENSG00000134115	69776	RPL23AP38	ENSG00000184423	111652	None	None
L1FLnI_3p26.3i	L1	L1	L1FLnI	chr3	1678179	1688294	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL23AP38	ENSG00000184423	81934	RPL23AP39	ENSG00000214074	41776	None	None
L1FLnI_3p26.3j	L1	L1	L1FLnI	chr3	1752896	1763769	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL23AP39	ENSG00000214074	22422	RPL21P17	ENSG00000214073	141882	None	None
L1FLnI_3p26.3k	L1	L1	L1FLnI	chr3	1913010	1923145	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018814.1	ENSG00000225044	39236	RPL21P17	ENSG00000214073	6885	None	None
L1FLnI_3p26.3l	L1	L1	L1FLnI	chr3	2423566	2433641	-	coding	CNTN4	protein_coding	ANTISENSE	ENSG00000144619	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.3m	L1	L1	L1FLnI	chr3	2666096	2676235	-	coding	CNTN4	protein_coding	ANTISENSE	ENSG00000144619	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.2a	L1	L1	L1FLnI	chr3	3715888	3725882	+	coding	SUMF1	protein_coding	ANTISENSE	ENSG00000144455	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.2b	L1	L1	L1FLnI	chr3	3885107	3895570	-	noncoding	SUMF1	protein_coding	SENSE	ENSG00000144455	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.2c	L1	L1	L1FLnI	chr3	3905971	3915442	+	noncoding	SUMF1	protein_coding	ANTISENSE	ENSG00000144455	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.2d	L1	L1	L1FLnI	chr3	3936864	3945513	-	coding	SUMF1,AC023480.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000144455,ENSG00000287720	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_3p26.2	L1	L1	L1FLI	chr3	3962074	3972536	+	coding	SUMF1,AC023480.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000144455,ENSG00000287720	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.1a	L1	L1	L1FLnI	chr3	4067680	4077217	+	noncoding	SUMF1	protein_coding	ANTISENSE	ENSG00000144455	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.1b	L1	L1	L1FLnI	chr3	4171067	4181184	+	coding	SUMF1	protein_coding	ANTISENSE	ENSG00000144455	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.1c	L1	L1	L1FLnI	chr3	4208303	4218010	+	noncoding	SUMF1	protein_coding	ANTISENSE	ENSG00000144455	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.1d	L1	L1	L1FLnI	chr3	4249750	4259776	+	coding	SUMF1	protein_coding	ANTISENSE	ENSG00000144455	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.1e	L1	L1	L1FLnI	chr3	4249750	4259788	+	coding	SUMF1	protein_coding	ANTISENSE	ENSG00000144455	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.1f	L1	L1	L1FLnI	chr3	4384686	4394100	-	noncoding	SUMF1	protein_coding	SENSE	ENSG00000144455	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:4386675-4386884	None
L1ORF2_3p26.1	L1	L1	L1ORF2	chr3	4915534	4923581	+	coding	BHLHE40-AS1	lncRNA	ANTISENSE	ENSG00000235831	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.1g	L1	L1	L1FLnI	chr3	4962259	4972413	+	coding	BHLHE40-AS1	lncRNA	ANTISENSE	ENSG00000235831	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.1h	L1	L1	L1FLnI	chr3	5370986	5380045	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC087857.1	ENSG00000229642	582797	AC026202.1	ENSG00000230944	114225	None	None
L1FLnI_3p26.1i	L1	L1	L1FLnI	chr3	5590307	5600451	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC087857.1	ENSG00000229642	362391	AC026202.1	ENSG00000230944	333546	None	None
L1FLnI_3p26.1j	L1	L1	L1FLnI	chr3	5597162	5606565	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026202.1	ENSG00000230944	340401	AC087857.1	ENSG00000229642	356277	None	None
L1FLnI_3p26.1k	L1	L1	L1FLnI	chr3	5830696	5841810	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087857.1	ENSG00000229642	121032	AC026202.1	ENSG00000230944	573935	None	None
L1FLnI_3p26.1l	L1	L1	L1FLnI	chr3	5830696	5840702	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087857.1	ENSG00000229642	122140	AC026202.1	ENSG00000230944	573935	None	None
L1FLnI_3p26.1m	L1	L1	L1FLnI	chr3	5939349	5948208	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087857.1	ENSG00000229642	14634	AC026202.1	ENSG00000230944	682588	None	None
L1FLnI_3p26.1n	L1	L1	L1FLnI	chr3	6025126	6033980	-	noncoding	AC087857.1	lncRNA	ANTISENSE	ENSG00000229642	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.1o	L1	L1	L1FLnI	chr3	6030358	6040335	-	coding	AC087857.1	lncRNA	ANTISENSE	ENSG00000229642	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.1p	L1	L1	L1FLnI	chr3	6266421	6276534	-	coding	AC026167.1	lncRNA	ANTISENSE	ENSG00000226022	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:6276065-6276405	None
L1FLnI_3p26.1q	L1	L1	L1FLnI	chr3	6279454	6290250	+	noncoding	AC026167.1	lncRNA	SENSE	ENSG00000226022	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.1r	L1	L1	L1FLnI	chr3	6337321	6347435	+	coding	AC026167.1	lncRNA	SENSE	ENSG00000226022	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.1s	L1	L1	L1FLnI	chr3	6484413	6494429	-	coding	AC069277.1	lncRNA	ANTISENSE	ENSG00000189229	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.1t	L1	L1	L1FLnI	chr3	6536142	6545443	-	coding	AC069277.1	lncRNA	ANTISENSE	ENSG00000189229	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.1u	L1	L1	L1FLnI	chr3	6584801	6593396	+	coding	AC069277.1	lncRNA	SENSE	ENSG00000189229	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.1v	L1	L1	L1FLnI	chr3	6763638	6773600	-	coding	GRM7-AS3,GRM7,MRPS36P1	lncRNA,protein_coding,processed_pseudogene	SENSE,ANTISENSE,SENSE	ENSG00000226258,ENSG00000196277,ENSG00000236152	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chr3:6763335-6763695	None
L1FLnI_3p26.1w	L1	L1	L1FLnI	chr3	6886734	6895644	-	coding	GRM7,GRM7-AS2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000196277,ENSG00000237665	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.1x	L1	L1	L1FLnI	chr3	6944556	6954690	-	coding	GRM7	protein_coding	ANTISENSE	ENSG00000196277	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.1y	L1	L1	L1FLnI	chr3	7329297	7338549	+	noncoding	GRM7	protein_coding	SENSE	ENSG00000196277	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.1z	L1	L1	L1FLnI	chr3	7329297	7338615	+	noncoding	GRM7	protein_coding	SENSE	ENSG00000196277	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p26.1aa	L1	L1	L1FLnI	chr3	7874347	7883393	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC077690.1	ENSG00000270207	83865	LMCD1-AS1	ENSG00000227110	67870	None	None
L1FLnI_3p26.1ba	L1	L1	L1FLnI	chr3	7930689	7940873	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC077690.1	ENSG00000270207	140207	LMCD1-AS1	ENSG00000227110	10390	None	None
L1FLnI_3p26.1ca	L1	L1	L1FLnI	chr3	8036786	8046828	+	noncoding	LMCD1-AS1	lncRNA	ANTISENSE	ENSG00000227110	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p25.3a	L1	L1	L1FLnI	chr3	8191625	8201392	-	noncoding	LMCD1-AS1	lncRNA	SENSE	ENSG00000227110	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p25.3b	L1	L1	L1FLnI	chr3	8191626	8201392	-	noncoding	LMCD1-AS1	lncRNA	SENSE	ENSG00000227110	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p25.3c	L1	L1	L1FLnI	chr3	8368336	8378546	+	noncoding	LMCD1-AS1	lncRNA	ANTISENSE	ENSG00000227110	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p25.3d	L1	L1	L1FLnI	chr3	8608026	8618035	+	coding	LMCD1-AS1	lncRNA	ANTISENSE	ENSG00000227110	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p25.3e	L1	L1	L1FLnI	chr3	8712578	8722597	+	coding	SSUH2	protein_coding	ANTISENSE	ENSG00000125046	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr3:8712633-8712978	None
L1FLnI_3p25.3f	L1	L1	L1FLnI	chr3	8918454	8928567	+	coding	RAD18	protein_coding	ANTISENSE	ENSG00000070950	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p25.3g	L1	L1	L1FLnI	chr3	9256357	9266884	+	noncoding	SRGAP3,SRGAP3-AS4	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000196220,ENSG00000235830	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p25.3h	L1	L1	L1FLnI	chr3	10654011	10663746	+	noncoding	ATP2B2	protein_coding	ANTISENSE	ENSG00000157087	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p25.3i	L1	L1	L1FLnI	chr3	10654011	10663730	+	noncoding	ATP2B2	protein_coding	ANTISENSE	ENSG00000157087	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p25.2a	L1	L1	L1FLnI	chr3	11861489	11871630	-	noncoding	FANCD2P2	unprocessed_pseudogene	ANTISENSE	ENSG00000230342	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p25.2b	L1	L1	L1FLnI	chr3	12027523	12036791	-	coding	SYN2	protein_coding	ANTISENSE	ENSG00000157152	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p25.1a	L1	L1	L1FLnI	chr3	13729905	13740344	-	noncoding	LINC00620	lncRNA	ANTISENSE	ENSG00000224514	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p25.1b	L1	L1	L1FLnI	chr3	13942027	13951177	-	noncoding	TPRXL	transcribed_processed_pseudogene	ANTISENSE	ENSG00000180438	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:13950834-13950838
L1FLnI_3p25.1c	L1	L1	L1FLnI	chr3	13984642	13993213	-	noncoding	TPRXL	transcribed_processed_pseudogene	ANTISENSE	ENSG00000180438	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p25.1d	L1	L1	L1FLnI	chr3	13989216	13999360	-	noncoding	TPRXL	transcribed_processed_pseudogene	ANTISENSE	ENSG00000180438	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p25.1e	L1	L1	L1FLnI	chr3	14012051	14021458	-	coding	TPRXL	transcribed_processed_pseudogene	ANTISENSE	ENSG00000180438	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:14017140-14017164,chr3:14017272-14017285,chr3:14017294-14017315,chr3:14019655-14019680
L1FLnI_3p25.1f	L1	L1	L1FLnI	chr3	14066599	14076746	+	coding	TPRXL	transcribed_processed_pseudogene	SENSE	ENSG00000180438	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p25.1g	L1	L1	L1FLnI	chr3	14188311	14197905	-	noncoding	LSM3	protein_coding	ANTISENSE	ENSG00000170860	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p25.1h	L1	L1	L1FLnI	chr3	15183167	15193199	+	coding	COL6A4P1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000230524	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p25.1i	L1	L1	L1FLnI	chr3	15391009	15401114	-	noncoding	METTL6	protein_coding	SENSE	ENSG00000206562	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p25.1j	L1	L1	L1FLnI	chr3	15906748	15916878	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090946.1	ENSG00000286689	53125	IMPDH1P8	ENSG00000224728	27177	None	None
L1FLnI_3p25.1k	L1	L1	L1FLnI	chr3	16037381	16046029	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GALNT15	ENSG00000131386	128651	AC090946.1	ENSG00000286689	66128	None	None
L1FLnI_3p25.1l	L1	L1	L1FLnI	chr3	16158373	16168490	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GALNT15	ENSG00000131386	6190	AC090946.1	ENSG00000286689	187120	None	None
L1FLnI_3p24.3a	L1	L1	L1FLnI	chr3	16673114	16683253	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	DAZL	ENSG00000092345	2808	AC091493.1	ENSG00000229271	4733	None	None
L1FLnI_3p24.3b	L1	L1	L1FLnI	chr3	16709501	16719226	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PLCL2	ENSG00000154822	83425	AC091493.1	ENSG00000229271	12022	None	None
L1FLnI_3p24.3c	L1	L1	L1FLnI	chr3	16727627	16737368	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091493.1	ENSG00000229271	30148	PLCL2	ENSG00000154822	65283	None	None
L1FLnI_3p24.3d	L1	L1	L1FLnI	chr3	17612393	17622539	-	noncoding	TBC1D5	protein_coding	SENSE	ENSG00000131374	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3e	L1	L1	L1FLnI	chr3	17689615	17700052	+	coding	TBC1D5	protein_coding	ANTISENSE	ENSG00000131374	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3f	L1	L1	L1FLnI	chr3	17999198	18009318	-	noncoding	TBC1D5	protein_coding	SENSE	ENSG00000131374	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3g	L1	L1	L1FLnI	chr3	18293183	18302326	+	noncoding	TBC1D5	protein_coding	ANTISENSE	ENSG00000131374	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:18302016-18302024
L1FLnI_3p24.3h	L1	L1	L1FLnI	chr3	18957308	18967333	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	KCNH8	ENSG00000183960	181177	RNU6-138P	ENSG00000251761	2259	None	chr3:18966140-18966141,chr3:18966147-18966160,chr3:18966225-18966236
L1FLnI_3p24.3i	L1	L1	L1FLnI	chr3	18972451	18982586	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-138P	ENSG00000251761	17402	KCNH8	ENSG00000183960	165924	None	None
L1FLnI_3p24.3j	L1	L1	L1FLnI	chr3	19096870	19106847	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	KCNH8	ENSG00000183960	41663	RNU6-138P	ENSG00000251761	141821	None	None
L1FLnI_3p24.3k	L1	L1	L1FLnI	chr3	19114172	19124573	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-138P	ENSG00000251761	159123	KCNH8	ENSG00000183960	23937	None	None
L1FLnI_3p24.3l	L1	L1	L1FLnI	chr3	19346831	19356386	+	coding	KCNH8	protein_coding	SENSE	ENSG00000183960	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr3:19347835-19347847
L1FLnI_3p24.3m	L1	L1	L1FLnI	chr3	19370112	19380125	-	coding	KCNH8	protein_coding	ANTISENSE	ENSG00000183960	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3n	L1	L1	L1FLnI	chr3	19403851	19414056	+	noncoding	KCNH8,AC061958.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000183960,ENSG00000287069	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3o	L1	L1	L1FLnI	chr3	19495495	19504436	+	coding	KCNH8,AC061958.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000183960,ENSG00000287069	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3p	L1	L1	L1FLnI	chr3	19495495	19504423	+	coding	KCNH8,AC061958.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000183960,ENSG00000287069	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3q	L1	L1	L1FLnI	chr3	19589762	19598886	-	coding	AC061958.1	lncRNA	SENSE	ENSG00000287069	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3r	L1	L1	L1FLnI	chr3	19676184	19686426	-	noncoding	AC061958.1	lncRNA	SENSE	ENSG00000287069	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3s	L1	L1	L1FLnI	chr3	19684438	19693469	+	noncoding	AC061958.1	lncRNA	ANTISENSE	ENSG00000287069	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3t	L1	L1	L1FLnI	chr3	19845011	19853540	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC061958.1	ENSG00000287069	142216	EFHB	ENSG00000163576	25932	None	None
L1FLnI_3p24.3u	L1	L1	L1FLnI	chr3	19851550	19861575	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC061958.1	ENSG00000287069	148755	EFHB	ENSG00000163576	17897	None	None
L1FLnI_3p24.3v	L1	L1	L1FLnI	chr3	20353254	20362748	-	coding	SGO1-AS1	lncRNA	ANTISENSE	ENSG00000231304	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3w	L1	L1	L1FLnI	chr3	20426644	20437070	-	noncoding	SGO1-AS1	lncRNA	ANTISENSE	ENSG00000231304	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3x	L1	L1	L1FLnI	chr3	20491228	20500009	-	noncoding	SGO1-AS1	lncRNA	ANTISENSE	ENSG00000231304	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3y	L1	L1	L1FLnI	chr3	20497771	20508421	-	coding	SGO1-AS1,RNU6-815P	lncRNA,snRNA	ANTISENSE,SENSE	ENSG00000231304,ENSG00000206807	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3z	L1	L1	L1FLnI	chr3	20591773	20601991	-	noncoding	SGO1-AS1	lncRNA	ANTISENSE	ENSG00000231304	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3aa	L1	L1	L1FLnI	chr3	20775355	20786228	+	noncoding	SGO1-AS1	lncRNA	SENSE	ENSG00000231304	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3ba	L1	L1	L1FLnI	chr3	20814934	20825031	-	coding	SGO1-AS1	lncRNA	ANTISENSE	ENSG00000231304	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3ca	L1	L1	L1FLnI	chr3	21011364	21021592	-	noncoding	SGO1-AS1,AC099753.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000231304,ENSG00000282987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3da	L1	L1	L1FLnI	chr3	21011761	21021592	-	noncoding	SGO1-AS1,AC099753.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000231304,ENSG00000282987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3ea	L1	L1	L1FLnI	chr3	21100015	21110327	-	coding	SGO1-AS1,AC099753.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000231304,ENSG00000282987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3fa	L1	L1	L1FLnI	chr3	21110042	21121588	-	noncoding	SGO1-AS1,AC099753.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000231304,ENSG00000282987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3ga	L1	L1	L1FLnI	chr3	21121049	21130368	+	coding	SGO1-AS1,AC099753.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000231304,ENSG00000282987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3ha	L1	L1	L1FLnI	chr3	21249226	21259255	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	VENTXP7	ENSG00000236380	146482	AC099753.1	ENSG00000282987	22921	None	None
L1FLnI_3p24.3ia	L1	L1	L1FLnI	chr3	21279246	21288946	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VENTXP7	ENSG00000236380	116791	AC099753.1	ENSG00000282987	52941	None	None
L1FLnI_3p24.3ja	L1	L1	L1FLnI	chr3	21554718	21565108	-	noncoding	ZNF385D,ZNF385D-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000151789,ENSG00000225542	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3ka	L1	L1	L1FLnI	chr3	21719590	21728789	+	coding	ZNF385D	protein_coding	ANTISENSE	ENSG00000151789	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3la	L1	L1	L1FLnI	chr3	21719590	21728779	+	coding	ZNF385D	protein_coding	ANTISENSE	ENSG00000151789	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3ma	L1	L1	L1FLnI	chr3	21808732	21818839	+	noncoding	ZNF385D	protein_coding	ANTISENSE	ENSG00000151789	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3na	L1	L1	L1FLnI	chr3	21966055	21976203	+	noncoding	ZNF385D,ZNF385D-AS2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000151789,ENSG00000223351	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3oa	L1	L1	L1FLnI	chr3	21966055	21976202	+	noncoding	ZNF385D,ZNF385D-AS2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000151789,ENSG00000223351	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3pa	L1	L1	L1FLnI	chr3	21982641	21992677	-	coding	ZNF385D	protein_coding	SENSE	ENSG00000151789	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3qa	L1	L1	L1FLnI	chr3	21982669	21992677	-	coding	ZNF385D	protein_coding	SENSE	ENSG00000151789	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3ra	L1	L1	L1FLnI	chr3	22078580	22087135	+	noncoding	ZNF385D	protein_coding	ANTISENSE	ENSG00000151789	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3sa	L1	L1	L1FLnI	chr3	22198967	22207697	+	noncoding	ZNF385D	protein_coding	ANTISENSE	ENSG00000151789	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3ta	L1	L1	L1FLnI	chr3	22408304	22418499	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092421.1	ENSG00000234723	251702	HMGB1P5	ENSG00000132967	25375	None	None
L1FLnI_3p24.3ua	L1	L1	L1FLnI	chr3	22637101	22647394	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092421.1	ENSG00000234723	22807	HMGB1P5	ENSG00000132967	254172	None	None
L1FLnI_3p24.3va	L1	L1	L1FLnI	chr3	22704295	22713541	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092421.1	ENSG00000234723	33584	AC114477.1	ENSG00000271235	97849	None	None
L1FLnI_3p24.3wa	L1	L1	L1FLnI	chr3	22737237	22747254	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC114477.1	ENSG00000271235	64136	AC092421.1	ENSG00000234723	66526	None	None
L1FLnI_3p24.3xa	L1	L1	L1FLnI	chr3	22797880	22807903	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092421.1	ENSG00000234723	127169	AC114477.1	ENSG00000271235	3487	None	None
L1FLnI_3p24.3ya	L1	L1	L1FLnI	chr3	22823578	22832906	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114477.1	ENSG00000271235	11531	RANP7	ENSG00000226183	71229	None	None
L1FLnI_3p24.3za	L1	L1	L1FLnI	chr3	22823578	22832900	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114477.1	ENSG00000271235	11531	RANP7	ENSG00000226183	71235	None	None
L1FLnI_3p24.3ab	L1	L1	L1FLnI	chr3	23029919	23040030	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL24P7	ENSG00000215016	94342	SALL4P5	ENSG00000231915	38337	None	None
L1FLnI_3p24.3bb	L1	L1	L1FLnI	chr3	23086850	23096959	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL24P7	ENSG00000215016	37413	SALL4P5	ENSG00000231915	95268	None	None
L1FLnI_3p24.3cb	L1	L1	L1FLnI	chr3	23295819	23305310	-	coding	UBE2E2	protein_coding	ANTISENSE	ENSG00000182247	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.3db	L1	L1	L1FLnI	chr3	23345745	23355885	+	coding	UBE2E2	protein_coding	SENSE	ENSG00000182247	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.2a	L1	L1	L1FLnI	chr3	24052999	24062388	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00691	ENSG00000224074	33881	NR1D2	ENSG00000174738	72382	None	None
L1FLnI_3p24.2b	L1	L1	L1FLnI	chr3	24078454	24087978	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00691	ENSG00000224074	8291	NR1D2	ENSG00000174738	97837	None	None
L1FLnI_3p24.2c	L1	L1	L1FLnI	chr3	24088960	24098991	-	coding	LINC00691,NPM1P23	lncRNA,transcribed_processed_pseudogene	SENSE,SENSE	ENSG00000224074,ENSG00000242109	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.2d	L1	L1	L1FLnI	chr3	24200023	24210330	+	coding	THRB	protein_coding	ANTISENSE	ENSG00000151090	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.2e	L1	L1	L1FLnI	chr3	24276691	24286093	+	coding	THRB	protein_coding	ANTISENSE	ENSG00000151090	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.2f	L1	L1	L1FLnI	chr3	24563291	24573447	+	noncoding	THRB-AS1	lncRNA	SENSE	ENSG00000228791	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.2g	L1	L1	L1FLnI	chr3	24975271	24985419	-	noncoding	AC092422.1	lncRNA	ANTISENSE	ENSG00000237838	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.2h	L1	L1	L1FLnI	chr3	25198957	25209063	-	coding	RARB	protein_coding	ANTISENSE	ENSG00000077092	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.2i	L1	L1	L1FLnI	chr3	25240819	25251277	-	noncoding	RARB	protein_coding	ANTISENSE	ENSG00000077092	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.2j	L1	L1	L1FLnI	chr3	25325060	25335193	+	coding	RARB	protein_coding	SENSE	ENSG00000077092	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.2k	L1	L1	L1FLnI	chr3	25356016	25366428	-	noncoding	RARB	protein_coding	ANTISENSE	ENSG00000077092	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.2l	L1	L1	L1FLnI	chr3	25390406	25401067	-	noncoding	RARB	protein_coding	ANTISENSE	ENSG00000077092	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.2m	L1	L1	L1FLnI	chr3	25927688	25938107	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00692	ENSG00000230891	53940	RPEP2	ENSG00000234158	77562	None	None
L1FLnI_3p24.2n	L1	L1	L1FLnI	chr3	26036030	26046269	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P12	ENSG00000237603	170053	RPEP2	ENSG00000234158	19661	None	None
L1FLnI_3p24.2o	L1	L1	L1FLnI	chr3	26123972	26134117	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P12	ENSG00000237603	82205	RPEP2	ENSG00000234158	107603	None	None
L1FLnI_3p24.2p	L1	L1	L1FLnI	chr3	26172973	26182340	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P12	ENSG00000237603	33982	RPEP2	ENSG00000234158	156604	None	None
L1FLnI_3p24.2q	L1	L1	L1FLnI	chr3	26238584	26248712	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	VENTXP4	ENSG00000230465	97969	HMGB3P12	ENSG00000237603	21707	None	None
L1FLnI_3p24.1a	L1	L1	L1FLnI	chr3	26384237	26394267	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC099754.1	ENSG00000225386	219994	VENTXP4	ENSG00000230465	36599	None	chr3:26384682-26384685
L1FLnI_3p24.1b	L1	L1	L1FLnI	chr3	26397519	26407545	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC099754.1	ENSG00000225386	206716	VENTXP4	ENSG00000230465	49881	None	None
L1FLnI_3p24.1c	L1	L1	L1FLnI	chr3	26461225	26470690	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VENTXP4	ENSG00000230465	113587	AC099754.1	ENSG00000225386	143571	None	None
L1FLnI_3p24.1d	L1	L1	L1FLnI	chr3	26518475	26527288	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099754.1	ENSG00000225386	86973	VENTXP4	ENSG00000230465	170837	None	None
L1FLnI_3p24.1e	L1	L1	L1FLnI	chr3	26779598	26789630	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LRRC3B	ENSG00000179796	62061	NEK10	ENSG00000163491	320455	None	None
L1FLnI_3p24.1f	L1	L1	L1FLnI	chr3	26872019	26881896	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LRRC3B	ENSG00000179796	154482	NEK10	ENSG00000163491	228189	None	None
L1FLnI_3p24.1g	L1	L1	L1FLnI	chr3	26877867	26888010	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LRRC3B	ENSG00000179796	160330	NEK10	ENSG00000163491	222075	None	None
L1FLnI_3p24.1h	L1	L1	L1FLnI	chr3	26940603	26949501	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LRRC3B	ENSG00000179796	223066	NEK10	ENSG00000163491	160584	None	None
L1FLnI_3p24.1i	L1	L1	L1FLnI	chr3	26953138	26963322	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NEK10	ENSG00000163491	146763	LRRC3B	ENSG00000179796	235601	None	None
L1FLnI_3p24.1j	L1	L1	L1FLnI	chr3	27052045	27061485	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NEK10	ENSG00000163491	48600	LRRC3B	ENSG00000179796	334508	None	None
L1FLnI_3p24.1k	L1	L1	L1FLnI	chr3	27684265	27694271	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC098614.3	ENSG00000271943	45154	AC098614.2	ENSG00000232766	8858	None	None
L1FLnI_3p24.1l	L1	L1	L1FLnI	chr3	27815485	27825483	-	coding	LINC01980	lncRNA	ANTISENSE	ENSG00000225548	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:27822297-27822302
L1FLnI_3p24.1m	L1	L1	L1FLnI	chr3	27945817	27954805	-	coding	LINC01967	lncRNA	SENSE	ENSG00000235493	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.1n	L1	L1	L1FLnI	chr3	28055744	28065770	+	coding	LINC01967	lncRNA	ANTISENSE	ENSG00000235493	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.1o	L1	L1	L1FLnI	chr3	28364251	28373804	-	noncoding	ZCWPW2,AC098650.1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000206559,ENSG00000283563	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.1p	L1	L1	L1FLnI	chr3	29356557	29366075	-	coding	AC098650.1,RBMS3	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000283563,ENSG00000144642	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.1q	L1	L1	L1FLnI	chr3	29572917	29581496	-	noncoding	AC098650.1,RBMS3,RBMS3-AS2	protein_coding,protein_coding,lncRNA	ANTISENSE,ANTISENSE,SENSE	ENSG00000283563,ENSG00000144642,ENSG00000203506	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.1r	L1	L1	L1FLnI	chr3	29666787	29676931	+	coding	AC098650.1,RBMS3	protein_coding,protein_coding	SENSE,SENSE	ENSG00000283563,ENSG00000144642	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.1s	L1	L1	L1FLnI	chr3	29778198	29788345	+	noncoding	RBMS3	protein_coding	SENSE	ENSG00000144642	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.1t	L1	L1	L1FLnI	chr3	29978962	29989302	-	noncoding	RBMS3	protein_coding	ANTISENSE	ENSG00000144642	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.1u	L1	L1	L1FLnI	chr3	29990419	30000418	+	coding	RBMS3	protein_coding	SENSE	ENSG00000144642	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p24.1v	L1	L1	L1FLnI	chr3	30047243	30056776	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RBMS3	ENSG00000144642	36852	AC025614.3	ENSG00000287774	235772	None	None
L1FLnI_3p24.1w	L1	L1	L1FLnI	chr3	30425151	30434128	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC025614.3	ENSG00000287774	120114	LINC01985	ENSG00000227260	84705	None	None
L1FLnI_3p24.1x	L1	L1	L1FLnI	chr3	30564227	30574153	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01985	ENSG00000227260	37034	TGFBR2	ENSG00000163513	32448	None	None
L1FLnI_3p23a	L1	L1	L1FLnI	chr3	30935292	30946009	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR466	ENSG00000265376	215695	GADL1	ENSG00000144644	40527	None	None
L1FLnI_3p23b	L1	L1	L1FLnI	chr3	30935300	30946009	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR466	ENSG00000265376	215695	GADL1	ENSG00000144644	40535	None	None
L1FLnI_3p23c	L1	L1	L1FLnI	chr3	31327644	31337388	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	H3P11	ENSG00000230111	58238	THRAP3P1	ENSG00000227339	115444	None	None
L1FLnI_3p22.3a	L1	L1	L1FLnI	chr3	32006955	32017106	+	coding	OSBPL10	protein_coding	ANTISENSE	ENSG00000144645	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.3b	L1	L1	L1FLnI	chr3	32259589	32269103	+	coding	CMTM8,KRT18P15	protein_coding,processed_pseudogene	SENSE,SENSE	ENSG00000170293,ENSG00000234737	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.3c	L1	L1	L1FLnI	chr3	33280557	33290653	-	noncoding	FBXL2	protein_coding	ANTISENSE	ENSG00000153558	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:33289664-33289685
L1FLnI_3p22.3d	L1	L1	L1FLnI	chr3	33667956	33678214	+	coding	CLASP2	protein_coding	ANTISENSE	ENSG00000163539	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.3e	L1	L1	L1FLnI	chr3	33964191	33974274	-	coding	LINC01811	lncRNA	ANTISENSE	ENSG00000226320	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.3f	L1	L1	L1FLnI	chr3	34079215	34089344	-	noncoding	LINC01811	lncRNA	ANTISENSE	ENSG00000226320	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.3g	L1	L1	L1FLnI	chr3	34090588	34100717	+	noncoding	LINC01811	lncRNA	SENSE	ENSG00000226320	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.3h	L1	L1	L1FLnI	chr3	34412645	34422672	-	coding	LINC01811	lncRNA	ANTISENSE	ENSG00000226320	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.3i	L1	L1	L1FLnI	chr3	34427238	34437385	-	coding	LINC01811	lncRNA	ANTISENSE	ENSG00000226320	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.3j	L1	L1	L1FLnI	chr3	34445924	34454622	-	noncoding	LINC01811	lncRNA	ANTISENSE	ENSG00000226320	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.3k	L1	L1	L1FLnI	chr3	34465835	34475864	-	noncoding	LINC01811	lncRNA	ANTISENSE	ENSG00000226320	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.3l	L1	L1	L1FLnI	chr3	34465842	34475864	-	noncoding	LINC01811	lncRNA	ANTISENSE	ENSG00000226320	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.3m	L1	L1	L1FLnI	chr3	34586622	34596069	-	noncoding	LINC01811	lncRNA	ANTISENSE	ENSG00000226320	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:34592223-34592245
L1FLnI_3p22.3n	L1	L1	L1FLnI	chr3	34754990	34764117	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007483.1	ENSG00000287641	60816	FECHP1	ENSG00000235534	108524	None	None
L1FLnI_3p22.3o	L1	L1	L1FLnI	chr3	34760212	34769736	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC007483.1	ENSG00000287641	66038	FECHP1	ENSG00000235534	102905	None	None
L1FLnI_3p22.3p	L1	L1	L1FLnI	chr3	34900661	34910734	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FECHP1	ENSG00000235534	26807	KRT8P18	ENSG00000228767	304971	None	None
L1FLnI_3p22.3q	L1	L1	L1FLnI	chr3	35084806	35094862	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FECHP1	ENSG00000235534	210952	KRT8P18	ENSG00000228767	120843	None	None
L1FLnI_3p22.3r	L1	L1	L1FLnI	chr3	35084806	35094866	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FECHP1	ENSG00000235534	210952	KRT8P18	ENSG00000228767	120839	None	None
L1FLnI_3p22.3s	L1	L1	L1FLnI	chr3	35100414	35110433	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FECHP1	ENSG00000235534	226560	KRT8P18	ENSG00000228767	105272	None	None
L1FLnI_3p22.3t	L1	L1	L1FLnI	chr3	35167340	35176580	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P18	ENSG00000228767	39125	FECHP1	ENSG00000235534	293486	None	None
L1FLnI_3p22.3u	L1	L1	L1FLnI	chr3	35173792	35182699	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P18	ENSG00000228767	33006	FECHP1	ENSG00000235534	299938	None	None
L1FLnI_3p22.3v	L1	L1	L1FLnI	chr3	35222319	35232438	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P18	ENSG00000228767	5170	RNU6-243P	ENSG00000212442	24402	None	None
L1FLnI_3p22.3w	L1	L1	L1FLnI	chr3	35476881	35486760	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARPP21	ENSG00000172995	152185	RNU6-243P	ENSG00000212442	219935	None	None
L1FLnI_3p22.3x	L1	L1	L1FLnI	chr3	35476891	35486760	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARPP21	ENSG00000172995	152185	RNU6-243P	ENSG00000212442	219945	None	None
L1FLnI_3p22.3y	L1	L1	L1FLnI	chr3	35553843	35562571	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-243P	ENSG00000212442	296897	ARPP21	ENSG00000172995	76374	None	None
L1FLnI_3p22.3z	L1	L1	L1FLnI	chr3	35818155	35828192	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104308.1	ENSG00000226489	43674	ARPP21	ENSG00000172995	23659	None	None
L1FLnI_3p22.3aa	L1	L1	L1FLnI	chr3	35994895	36003890	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RFC3P1	ENSG00000236158	165877	AC104308.1	ENSG00000226489	122697	None	None
L1FLnI_3p22.3ba	L1	L1	L1FLnI	chr3	36048190	36057594	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RFC3P1	ENSG00000236158	112173	AC104308.1	ENSG00000226489	175992	None	None
L1FLnI_3p22.3ca	L1	L1	L1FLnI	chr3	36079246	36089385	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104308.1	ENSG00000226489	207048	RFC3P1	ENSG00000236158	80382	None	None
L1FLnI_3p22.3da	L1	L1	L1FLnI	chr3	36185924	36195342	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STAC	ENSG00000144681	185002	RFC3P1	ENSG00000236158	15476	None	None
L1FLnI_3p22.3ea	L1	L1	L1FLnI	chr3	36317475	36327593	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RFC3P1	ENSG00000236158	147027	STAC	ENSG00000144681	52751	None	None
L1FLnI_3p22.2a	L1	L1	L1FLnI	chr3	36465516	36474037	-	noncoding	STAC	protein_coding	ANTISENSE	ENSG00000144681	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.2b	L1	L1	L1FLnI	chr3	37424855	37435016	-	noncoding	C3orf35	lncRNA	ANTISENSE	ENSG00000198590	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.2c	L1	L1	L1FLnI	chr3	37612464	37622602	-	coding	ITGA9	protein_coding	ANTISENSE	ENSG00000144668	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.2d	L1	L1	L1FLnI	chr3	37654197	37663374	-	noncoding	ITGA9	protein_coding	ANTISENSE	ENSG00000144668	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.2e	L1	L1	L1FLnI	chr3	38401902	38412038	+	coding	XYLB	protein_coding	SENSE	ENSG00000093217	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.2f	L1	L1	L1FLnI	chr3	38763727	38772736	-	noncoding	SCN10A	protein_coding	SENSE	ENSG00000185313	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.2g	L1	L1	L1FLnI	chr3	38928738	38938893	+	coding	SCN11A	protein_coding	ANTISENSE	ENSG00000168356	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.1a	L1	L1	L1FLnI	chr3	39300728	39310343	+	coding	AC104850.2	lncRNA	ANTISENSE	ENSG00000287780	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.1b	L1	L1	L1FLnI	chr3	39366146	39376263	-	coding	AC104850.2	lncRNA	SENSE	ENSG00000287780	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:39374587-39374705	None
L1FLnI_3p22.1c	L1	L1	L1FLnI	chr3	39547412	39557855	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MOBP	ENSG00000168314	17933	NFU1P1	ENSG00000230757	85783	None	None
L1FLnI_3p22.1d	L1	L1	L1FLnI	chr3	39614497	39623812	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NFU1P1	ENSG00000230757	19826	MOBP	ENSG00000168314	85018	None	None
L1FLnI_3p22.1e	L1	L1	L1FLnI	chr3	39681047	39690032	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NFU1P1	ENSG00000230757	36342	MYRIP	ENSG00000170011	118882	None	None
L1FLnI_3p22.1f	L1	L1	L1FLnI	chr3	39737496	39746648	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MYRIP	ENSG00000170011	62266	NFU1P1	ENSG00000230757	92791	None	None
L1FLnI_3p22.1g	L1	L1	L1FLnI	chr3	39871843	39881991	-	coding	MYRIP	protein_coding	ANTISENSE	ENSG00000170011	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.1h	L1	L1	L1FLnI	chr3	39950064	39960186	+	coding	MYRIP	protein_coding	SENSE	ENSG00000170011	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.1i	L1	L1	L1FLnI	chr3	39990555	40000678	+	coding	MYRIP	protein_coding	SENSE	ENSG00000170011	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.1j	L1	L1	L1FLnI	chr3	40154492	40164529	-	coding	MYRIP,EIF1B-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000170011,ENSG00000280739	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.1k	L1	L1	L1FLnI	chr3	40267892	40278006	+	coding	EIF1B-AS1	lncRNA	ANTISENSE	ENSG00000280739	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.1l	L1	L1	L1FLnI	chr3	40727624	40736241	-	noncoding	AC099560.1	lncRNA	ANTISENSE	ENSG00000231873	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.1m	L1	L1	L1FLnI	chr3	40901906	40911932	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC099541.1	ENSG00000233096	58609	AC099541.2	ENSG00000287415	25926	None	None
L1FLnI_3p22.1n	L1	L1	L1FLnI	chr3	40926385	40935219	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099541.2	ENSG00000287415	50405	AC099541.1	ENSG00000233096	35322	None	chr3:40930136-40930145
L1FLnI_3p22.1o	L1	L1	L1FLnI	chr3	40944801	40954905	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099541.1	ENSG00000233096	15636	AC099541.2	ENSG00000287415	68821	None	None
L1FLnI_3p22.1p	L1	L1	L1FLnI	chr3	40953371	40963521	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099541.1	ENSG00000233096	7020	AC099541.2	ENSG00000287415	77391	None	None
L1FLnI_3p22.1q	L1	L1	L1FLnI	chr3	41274331	41284306	+	noncoding	ULK4	protein_coding	ANTISENSE	ENSG00000168038	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.1r	L1	L1	L1FLnI	chr3	41274331	41284278	+	noncoding	ULK4	protein_coding	ANTISENSE	ENSG00000168038	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.1s	L1	L1	L1FLnI	chr3	41366858	41376913	+	coding	ULK4	protein_coding	ANTISENSE	ENSG00000168038	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.1t	L1	L1	L1FLnI	chr3	41420079	41430416	+	noncoding	ULK4	protein_coding	ANTISENSE	ENSG00000168038	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.1u	L1	L1	L1FLnI	chr3	41543743	41554175	+	noncoding	ULK4	protein_coding	ANTISENSE	ENSG00000168038	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.1v	L1	L1	L1FLnI	chr3	41558378	41567936	-	coding	ULK4	protein_coding	SENSE	ENSG00000168038	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.1w	L1	L1	L1FLnI	chr3	41612853	41623275	+	noncoding	ULK4	protein_coding	ANTISENSE	ENSG00000168038	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.1x	L1	L1	L1FLnI	chr3	41641696	41651850	-	coding	ULK4	protein_coding	SENSE	ENSG00000168038	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.1y	L1	L1	L1FLnI	chr3	41820684	41830804	+	coding	ULK4	protein_coding	ANTISENSE	ENSG00000168038	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.1z	L1	L1	L1FLnI	chr3	41921607	41931988	+	coding	ULK4	protein_coding	ANTISENSE	ENSG00000168038	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.1aa	L1	L1	L1FLnI	chr3	42235587	42245148	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TRAK1	ENSG00000182606	9697	CCK	ENSG00000187094	12677	None	None
L1FLnI_3p22.1ba	L1	L1	L1FLnI	chr3	42281424	42291574	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SALL4P6	ENSG00000231280	29431	AC018358.1	ENSG00000281160	15034	None	None
L1FLnI_3p22.1ca	L1	L1	L1FLnI	chr3	43061276	43071298	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GASK1A	ENSG00000144649	1065	POMGNT2	ENSG00000144647	7934	None	None
L1FLnI_3p22.1da	L1	L1	L1FLnI	chr3	43061276	43071290	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GASK1A	ENSG00000144649	1065	POMGNT2	ENSG00000144647	7942	None	None
L1FLnI_3p22.1ea	L1	L1	L1FLnI	chr3	43562324	43572347	+	coding	ANO10	protein_coding	ANTISENSE	ENSG00000160746	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p22.1fa	L1	L1	L1FLnI	chr3	43588122	43598274	+	coding	ANO10	protein_coding	ANTISENSE	ENSG00000160746	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p21.33a	L1	L1	L1FLnI	chr3	43657475	43666034	+	noncoding	ANO10	protein_coding	ANTISENSE	ENSG00000160746	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p21.33b	L1	L1	L1FLnI	chr3	43675456	43685594	+	coding	ANO10	protein_coding	ANTISENSE	ENSG00000160746	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p21.33c	L1	L1	L1FLnI	chr3	43800390	43809482	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC006058.2	ENSG00000271192	187414	AC006055.1	ENSG00000235886	20408	None	None
L1FLnI_3p21.33d	L1	L1	L1FLnI	chr3	43933944	43943520	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC006058.2	ENSG00000271192	53376	AC006055.1	ENSG00000235886	153962	None	None
L1FLnI_3p21.33e	L1	L1	L1FLnI	chr3	43939517	43950021	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC006058.2	ENSG00000271192	46875	AC006055.1	ENSG00000235886	159535	None	None
L1FLnI_3p21.31a	L1	L1	L1FLnI	chr3	45272763	45282209	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010170.1	ENSG00000202268	17143	LARS2	ENSG00000011376	106352	chr3:45273779-45274184	None
L1FLnI_3p21.31b	L1	L1	L1FLnI	chr3	46144849	46153487	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FLT1P1	ENSG00000229515	1172	CCR3	ENSG00000183625	10117	None	None
L1FLnI_3p21.31c	L1	L1	L1FLnI	chr3	46144849	46153480	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FLT1P1	ENSG00000229515	1172	CCR3	ENSG00000183625	10124	None	None
L1FLnI_3p21.31d	L1	L1	L1FLnI	chr3	46159078	46167842	-	noncoding	CCR3	protein_coding	ANTISENSE	ENSG00000183625	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:46163467-46163487,chr3:46163770-46163791,chr3:46163434-46163437
L1FLnI_3p21.31e	L1	L1	L1FLnI	chr3	46212862	46221510	+	noncoding	CCR3	protein_coding	SENSE	ENSG00000183625	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:46213188-46213789	chr3:46213492-46213508,chr3:46213350-46213359
L1FLnI_3p21.31f	L1	L1	L1FLnI	chr3	46782607	46792638	-	coding	AC109583.1,AC109583.4	protein_coding,lncRNA	SENSE,SENSE	ENSG00000206549,ENSG00000284672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p21.31g	L1	L1	L1FLnI	chr3	46787021	46796572	+	coding	AC109583.1,AC109583.4	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000206549,ENSG00000284672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p21.2a	L1	L1	L1FLnI	chr3	50874348	50883774	+	coding	DOCK3,ST13P14	protein_coding,processed_pseudogene	SENSE,ANTISENSE	ENSG00000088538,ENSG00000240959	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p21.2b	L1	L1	L1FLnI	chr3	50895023	50905429	-	noncoding	DOCK3	protein_coding	ANTISENSE	ENSG00000088538	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p21.2c	L1	L1	L1FLnI	chr3	50972639	50982672	-	coding	DOCK3	protein_coding	ANTISENSE	ENSG00000088538	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p21.2d	L1	L1	L1FLnI	chr3	51006126	51016283	-	noncoding	DOCK3	protein_coding	ANTISENSE	ENSG00000088538	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p21.2e	L1	L1	L1FLnI	chr3	51115974	51124948	-	coding	DOCK3	protein_coding	ANTISENSE	ENSG00000088538	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p21.2f	L1	L1	L1FLnI	chr3	51195550	51205678	+	coding	DOCK3	protein_coding	SENSE	ENSG00000088538	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p21.2g	L1	L1	L1FLnI	chr3	51195550	51205692	+	coding	DOCK3	protein_coding	SENSE	ENSG00000088538	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p21.2h	L1	L1	L1FLnI	chr3	51250345	51259691	-	noncoding	DOCK3	protein_coding	ANTISENSE	ENSG00000088538	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p21.2i	L1	L1	L1FLnI	chr3	51250371	51259691	-	noncoding	DOCK3	protein_coding	ANTISENSE	ENSG00000088538	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p21.2j	L1	L1	L1FLnI	chr3	51297907	51308419	-	noncoding	DOCK3	protein_coding	ANTISENSE	ENSG00000088538	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:51307901-51307904
L1FLnI_3p21.2k	L1	L1	L1FLnI	chr3	51362990	51371614	-	coding	DOCK3	protein_coding	ANTISENSE	ENSG00000088538	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p21.2l	L1	L1	L1FLnI	chr3	51452422	51462572	+	coding	DCAF1	protein_coding	ANTISENSE	ENSG00000145041	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p21.2m	L1	L1	L1FLnI	chr3	51644360	51654435	+	noncoding	RAD54L2	protein_coding	SENSE	ENSG00000164080	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p21.1a	L1	L1	L1FLnI	chr3	53364798	53374825	-	coding	CACNA1D	protein_coding	ANTISENSE	ENSG00000157388	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p21.1b	L1	L1	L1FLnI	chr3	53387657	53397784	+	noncoding	CACNA1D,AC112218.1	protein_coding,snoRNA	SENSE,ANTISENSE	ENSG00000157388,ENSG00000212608	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p21.1c	L1	L1	L1FLnI	chr3	53440244	53450402	-	coding	CACNA1D	protein_coding	ANTISENSE	ENSG00000157388	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p21.1d	L1	L1	L1FLnI	chr3	53440260	53450402	-	coding	CACNA1D	protein_coding	ANTISENSE	ENSG00000157388	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p21.1e	L1	L1	L1FLnI	chr3	53467465	53477576	-	noncoding	CACNA1D,AC092035.1	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000157388,ENSG00000227224	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p21.1f	L1	L1	L1FLnI	chr3	53921249	53931305	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC115282.2	ENSG00000288029	102683	SELENOK	ENSG00000113811	29287	None	None
L1FLnI_3p21.1g	L1	L1	L1FLnI	chr3	54281457	54291572	+	coding	CACNA2D3	protein_coding	SENSE	ENSG00000157445	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_3p21.1	L1	L1	L1ORF2	chr3	54393310	54401328	-	coding	CACNA2D3	protein_coding	ANTISENSE	ENSG00000157445	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.3a	L1	L1	L1FLnI	chr3	54458272	54468420	-	coding	CACNA2D3	protein_coding	ANTISENSE	ENSG00000157445	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.3b	L1	L1	L1FLnI	chr3	54464633	54475052	+	coding	CACNA2D3	protein_coding	SENSE	ENSG00000157445	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.3c	L1	L1	L1FLnI	chr3	55045606	55055629	-	coding	CACNA2D3	protein_coding	ANTISENSE	ENSG00000157445	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.3d	L1	L1	L1FLnI	chr3	55132831	55142851	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CACNA2D3	ENSG00000157445	58274	AC092059.1	ENSG00000239991	24059	None	None
L1FLnI_3p14.3e	L1	L1	L1FLnI	chr3	55205633	55215769	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02017	ENSG00000243572	16419	LINC02030	ENSG00000240708	11093	None	None
L1FLnI_3p14.3f	L1	L1	L1FLnI	chr3	55216313	55226595	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02030	ENSG00000240708	267	LINC02017	ENSG00000243572	27099	None	None
L1FLnI_3p14.3g	L1	L1	L1FLnI	chr3	55216313	55225687	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02030	ENSG00000240708	1175	LINC02017	ENSG00000243572	27099	None	None
L1FLnI_3p14.3h	L1	L1	L1FLnI	chr3	55385241	55395329	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC121764.3	ENSG00000242775	23412	WNT5A	ENSG00000114251	70386	None	None
L1FLnI_3p14.3i	L1	L1	L1FLnI	chr3	55828128	55838262	+	coding	ERC2	protein_coding	ANTISENSE	ENSG00000187672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:55828810-55828817
L1FLnI_3p14.3j	L1	L1	L1FLnI	chr3	56209571	56219649	+	coding	ERC2	protein_coding	ANTISENSE	ENSG00000187672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.3k	L1	L1	L1FLnI	chr3	56575908	56586028	-	noncoding	CCDC66	protein_coding	ANTISENSE	ENSG00000180376	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.3l	L1	L1	L1FLnI	chr3	56606250	56615600	-	noncoding	CCDC66	protein_coding	ANTISENSE	ENSG00000180376	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.3m	L1	L1	L1FLnI	chr3	56941634	56951790	+	noncoding	ARHGEF3,ARHGEF3-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000163947,ENSG00000240198	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.3n	L1	L1	L1FLnI	chr3	57321085	57331226	+	coding	DNAH12	protein_coding	ANTISENSE	ENSG00000174844	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.3o	L1	L1	L1FLnI	chr3	57473440	57483584	+	coding	DNAH12	protein_coding	ANTISENSE	ENSG00000174844	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.3p	L1	L1	L1FLnI	chr3	57603383	57612902	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ARF4-AS1	ENSG00000272146	2456	RNU6ATAC26P	ENSG00000210841	6545	None	None
L1FLnI_3p14.3q	L1	L1	L1FLnI	chr3	58275145	58285229	-	noncoding	ABHD6	protein_coding	ANTISENSE	ENSG00000163686	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.2a	L1	L1	L1FLnI	chr3	58758034	58768168	-	coding	C3orf67	protein_coding	SENSE	ENSG00000163689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:58765468-58765471
L1FLnI_3p14.2b	L1	L1	L1FLnI	chr3	58758041	58768168	-	coding	C3orf67	protein_coding	SENSE	ENSG00000163689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:58765468-58765471
L1FLnI_3p14.2c	L1	L1	L1FLnI	chr3	58803079	58813215	+	coding	C3orf67	protein_coding	ANTISENSE	ENSG00000163689	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.2d	L1	L1	L1FLnI	chr3	58812780	58822804	+	coding	C3orf67	protein_coding	ANTISENSE	ENSG00000163689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.2e	L1	L1	L1FLnI	chr3	58838656	58848679	+	coding	C3orf67,C3orf67-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000163689,ENSG00000242428	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.2f	L1	L1	L1FLnI	chr3	58927289	58937433	+	coding	C3orf67,C3orf67-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000163689,ENSG00000242428	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.2g	L1	L1	L1FLnI	chr3	59028397	59038791	+	coding	C3orf67	protein_coding	ANTISENSE	ENSG00000163689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.2h	L1	L1	L1FLnI	chr3	59058341	59069061	-	noncoding	AC126121.3	lncRNA	ANTISENSE	ENSG00000243295	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.2i	L1	L1	L1FLnI	chr3	59220345	59230278	-	noncoding	AC126121.3	lncRNA	ANTISENSE	ENSG00000243295	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.2j	L1	L1	L1FLnI	chr3	59347991	59356697	-	noncoding	AC126121.3	lncRNA	ANTISENSE	ENSG00000243295	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:59354149-59354158
L1FLnI_3p14.2k	L1	L1	L1FLnI	chr3	59354283	59364446	-	noncoding	AC126121.3	lncRNA	ANTISENSE	ENSG00000243295	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.2l	L1	L1	L1FLnI	chr3	59391658	59400781	+	coding	AC126121.3	lncRNA	SENSE	ENSG00000243295	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.2m	L1	L1	L1FLnI	chr3	59610357	59620453	+	coding	AC126121.3	lncRNA	SENSE	ENSG00000243295	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.2n	L1	L1	L1FLnI	chr3	60463723	60475310	-	noncoding	FHIT	protein_coding	SENSE	ENSG00000189283	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.2o	L1	L1	L1FLnI	chr3	60477613	60486281	+	noncoding	FHIT	protein_coding	ANTISENSE	ENSG00000189283	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.2p	L1	L1	L1FLnI	chr3	60706787	60715825	+	coding	FHIT	protein_coding	ANTISENSE	ENSG00000189283	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.2q	L1	L1	L1FLnI	chr3	60959927	60970066	-	coding	FHIT	protein_coding	SENSE	ENSG00000189283	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.2r	L1	L1	L1FLnI	chr3	61039490	61049630	+	coding	FHIT	protein_coding	ANTISENSE	ENSG00000189283	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.2s	L1	L1	L1FLnI	chr3	61099562	61108894	-	coding	FHIT	protein_coding	SENSE	ENSG00000189283	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:61100008-61100030	None
L1FLnI_3p14.2t	L1	L1	L1FLnI	chr3	61204328	61214455	-	coding	FHIT	protein_coding	SENSE	ENSG00000189283	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.2u	L1	L1	L1FLnI	chr3	61207523	61217654	+	coding	FHIT	protein_coding	ANTISENSE	ENSG00000189283	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.2v	L1	L1	L1FLnI	chr3	61258353	61267774	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PTPRG	ENSG00000144724	293795	FHIT	ENSG00000189283	6894	None	None
L1FLnI_3p14.2w	L1	L1	L1FLnI	chr3	62846783	62855831	-	coding	CADPS	protein_coding	SENSE	ENSG00000163618	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:62852594-62852597
L1FLnI_3p14.2x	L1	L1	L1FLnI	chr3	63009582	63019775	-	coding	LINC00698	lncRNA	ANTISENSE	ENSG00000244342	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:63015761-63015936	None
L1FLnI_3p14.2y	L1	L1	L1FLnI	chr3	63132770	63142801	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00698	ENSG00000244342	7708	UBL5P3	ENSG00000240359	60417	None	None
L1FLnI_3p14.2z	L1	L1	L1FLnI	chr3	63211210	63221214	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SYNPR	ENSG00000163630	7101	UBL5P3	ENSG00000240359	7762	None	None
L1FLnI_3p14.2aa	L1	L1	L1FLnI	chr3	63252114	63262224	+	noncoding	SYNPR	protein_coding	SENSE	ENSG00000163630	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.2ba	L1	L1	L1FLnI	chr3	63252114	63262211	+	noncoding	SYNPR	protein_coding	SENSE	ENSG00000163630	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.2ca	L1	L1	L1FLnI	chr3	63313583	63322663	-	noncoding	SYNPR	protein_coding	ANTISENSE	ENSG00000163630	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.2da	L1	L1	L1FLnI	chr3	63313599	63322663	-	noncoding	SYNPR	protein_coding	ANTISENSE	ENSG00000163630	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.2ea	L1	L1	L1FLnI	chr3	63641672	63651833	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SYNPR	ENSG00000163630	24748	SNTN	ENSG00000188817	842	None	None
L1FLnI_3p14.2fa	L1	L1	L1FLnI	chr3	63691999	63700882	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SNTN	ENSG00000188817	12979	AC104162.1	ENSG00000224479	40945	None	None
L1FLnI_3p14.2ga	L1	L1	L1FLnI	chr3	63729814	63739837	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SNTN	ENSG00000188817	50794	AC104162.1	ENSG00000224479	1990	None	None
L1FLnI_3p14.2ha	L1	L1	L1FLnI	chr3	63729814	63739864	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SNTN	ENSG00000188817	50794	AC104162.1	ENSG00000224479	1963	None	None
L1FLnI_3p14.1a	L1	L1	L1FLnI	chr3	64110492	64119887	+	noncoding	PRICKLE2	protein_coding	ANTISENSE	ENSG00000163637	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.1b	L1	L1	L1FLnI	chr3	64472295	64482459	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PRICKLE2-DT	ENSG00000244564	16225	RNU6-739P	ENSG00000212340	29296	None	None
L1FLnI_3p14.1c	L1	L1	L1FLnI	chr3	64772995	64782350	+	noncoding	ADAMTS9-AS2	lncRNA	SENSE	ENSG00000241684	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.1d	L1	L1	L1FLnI	chr3	65050861	65060379	+	coding	ADAMTS9-AS2	lncRNA	SENSE	ENSG00000241684	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.1e	L1	L1	L1FLnI	chr3	65116390	65126715	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ADAMTS9-AS2	ENSG00000241684	62951	LINC02040	ENSG00000243149	48201	None	None
L1FLI_3p14.1	L1	L1	L1FLI	chr3	65508291	65516335	+	coding	MAGI1	protein_coding	ANTISENSE	ENSG00000151276	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.1f	L1	L1	L1FLnI	chr3	66287838	66296613	-	coding	SLC25A26,RNU6-787P	protein_coding,snRNA	ANTISENSE,SENSE	ENSG00000144741,ENSG00000206759	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.1g	L1	L1	L1FLnI	chr3	66305988	66316458	-	noncoding	SLC25A26	protein_coding	ANTISENSE	ENSG00000144741	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.1h	L1	L1	L1FLnI	chr3	66312474	66322127	-	noncoding	SLC25A26	protein_coding	ANTISENSE	ENSG00000144741	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.1i	L1	L1	L1FLnI	chr3	66312488	66322127	-	noncoding	SLC25A26	protein_coding	ANTISENSE	ENSG00000144741	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.1j	L1	L1	L1FLnI	chr3	66763173	66773305	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC098969.2	ENSG00000288039	6771	RPL21P41	ENSG00000214560	125761	None	None
L1FLnI_3p14.1k	L1	L1	L1FLnI	chr3	66839303	66849443	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC098969.2	ENSG00000288039	14864	AC020655.1	ENSG00000287873	147725	None	None
L1FLnI_3p14.1l	L1	L1	L1FLnI	chr3	66889232	66898222	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC098969.2	ENSG00000288039	64793	AC020655.1	ENSG00000287873	98946	None	None
L1FLnI_3p14.1m	L1	L1	L1FLnI	chr3	67082247	67090855	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KBTBD8	ENSG00000163376	71037	MIR4272	ENSG00000283298	134609	None	chr3:67090769-67090774
L1FLnI_3p14.1n	L1	L1	L1FLnI	chr3	67144145	67154297	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	KBTBD8	ENSG00000163376	132935	MIR4272	ENSG00000283298	71167	None	None
L1FLnI_3p14.1o	L1	L1	L1FLnI	chr3	67150488	67160930	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KBTBD8	ENSG00000163376	139278	MIR4272	ENSG00000283298	64534	None	None
L1FLnI_3p14.1p	L1	L1	L1FLnI	chr3	67389531	67399681	+	coding	SUCLG2	protein_coding	ANTISENSE	ENSG00000172340	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.1q	L1	L1	L1FLnI	chr3	67758930	67767696	-	coding	SUCLG2-AS1	lncRNA	ANTISENSE	ENSG00000241316	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.1r	L1	L1	L1FLnI	chr3	67775126	67785570	-	noncoding	SUCLG2-AS1	lncRNA	ANTISENSE	ENSG00000241316	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.1s	L1	L1	L1FLnI	chr3	67944318	67954446	+	coding	SUCLG2-AS1	lncRNA	SENSE	ENSG00000241316	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.1t	L1	L1	L1FLnI	chr3	68075818	68085839	-	coding	TAFA1	protein_coding	ANTISENSE	ENSG00000183662	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.1u	L1	L1	L1FLnI	chr3	68075821	68085839	-	coding	TAFA1	protein_coding	ANTISENSE	ENSG00000183662	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.1v	L1	L1	L1FLnI	chr3	68386071	68396448	+	noncoding	TAFA1	protein_coding	SENSE	ENSG00000183662	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.1w	L1	L1	L1FLnI	chr3	68386071	68396438	+	coding	TAFA1	protein_coding	SENSE	ENSG00000183662	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.1x	L1	L1	L1FLnI	chr3	68580606	68590778	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC096922.1	ENSG00000244640	42928	TAFA1	ENSG00000183662	34985	None	None
L1FLnI_3p14.1y	L1	L1	L1FLnI	chr3	68622516	68631127	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096922.1	ENSG00000244640	2579	TAFA1	ENSG00000183662	76895	None	None
L1FLnI_3p14.1z	L1	L1	L1FLnI	chr3	68718949	68729325	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TAFA4	ENSG00000163377	2441	PSMC1P1	ENSG00000241506	81925	None	None
L1FLnI_3p14.1aa	L1	L1	L1FLnI	chr3	68806720	68816825	+	coding	TAFA4	protein_coding	ANTISENSE	ENSG00000163377	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.1ba	L1	L1	L1FLnI	chr3	68826392	68836825	-	noncoding	TAFA4	protein_coding	SENSE	ENSG00000163377	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.1ca	L1	L1	L1FLnI	chr3	68841062	68851214	-	noncoding	TAFA4	protein_coding	SENSE	ENSG00000163377	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.1da	L1	L1	L1FLnI	chr3	68862308	68871067	+	noncoding	TAFA4	protein_coding	ANTISENSE	ENSG00000163377	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:68866648-68866652
L1FLnI_3p14.1ea	L1	L1	L1FLnI	chr3	69341362	69351493	+	coding	FRMD4B	protein_coding	ANTISENSE	ENSG00000114541	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.1fa	L1	L1	L1FLnI	chr3	69474707	69484863	-	coding	FRMD4B	protein_coding	SENSE	ENSG00000114541	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p14.1ga	L1	L1	L1FLnI	chr3	69617749	69628682	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104445.1	ENSG00000241667	24628	MITF	ENSG00000187098	110753	None	None
L1FLnI_3p14.1ha	L1	L1	L1FLnI	chr3	69630870	69640984	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MITF	ENSG00000187098	98451	AC104445.1	ENSG00000241667	37749	None	None
L1FLnI_3p13a	L1	L1	L1FLnI	chr3	70284558	70294583	-	coding	SAMMSON,MDFIC2	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000240405,ENSG00000242120	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p13b	L1	L1	L1FLnI	chr3	70444511	70453887	-	coding	SAMMSON	lncRNA	ANTISENSE	ENSG00000240405	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p13c	L1	L1	L1FLnI	chr3	70444525	70453887	-	coding	SAMMSON	lncRNA	ANTISENSE	ENSG00000240405	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p13d	L1	L1	L1FLnI	chr3	70675170	70685298	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	COX6CP6	ENSG00000240156	65825	AC104633.2	ENSG00000287669	54845	None	None
L1FLnI_3p13e	L1	L1	L1FLnI	chr3	70790890	70800428	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-281P	ENSG00000206939	7922	HMGB1P36	ENSG00000243873	36317	None	None
L1FLnI_3p13f	L1	L1	L1FLnI	chr3	72709843	72719987	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC097369.2	ENSG00000287595	18931	RNA5SP136	ENSG00000222838	18032	None	None
L1FLnI_3p13g	L1	L1	L1FLnI	chr3	73332352	73342490	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PDZRN3	ENSG00000121440	39941	RNU6-1270P	ENSG00000252937	90456	None	None
L1FLnI_3p13h	L1	L1	L1FLnI	chr3	73367963	73378115	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PDZRN3	ENSG00000121440	4316	RNU6-1270P	ENSG00000252937	126067	None	None
L1FLnI_3p13i	L1	L1	L1FLnI	chr3	73831730	73841163	+	noncoding	LINC02005	lncRNA	SENSE	ENSG00000242741	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p13j	L1	L1	L1FLnI	chr3	73987214	73997334	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC119038.1	ENSG00000278554	27287	LINC02047	ENSG00000239454	2471	None	None
L1FLnI_3p12.3a	L1	L1	L1FLnI	chr3	74156464	74166613	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CNTN3	ENSG00000113805	95955	AKR1B1P2	ENSG00000213452	19572	None	None
L1FLnI_3p12.3b	L1	L1	L1FLnI	chr3	74269788	74280290	+	noncoding	CNTN3	protein_coding	ANTISENSE	ENSG00000113805	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p12.3c	L1	L1	L1FLnI	chr3	74269788	74279896	+	noncoding	CNTN3	protein_coding	ANTISENSE	ENSG00000113805	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p12.3d	L1	L1	L1FLnI	chr3	74450013	74459286	-	coding	CNTN3	protein_coding	SENSE	ENSG00000113805	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p12.3e	L1	L1	L1FLnI	chr3	74790640	74800848	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CNTN3	ENSG00000113805	269500	NIPA2P2	ENSG00000241022	283307	None	None
L1FLnI_3p12.3f	L1	L1	L1FLnI	chr3	74818127	74826635	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NIPA2P2	ENSG00000241022	257520	CNTN3	ENSG00000113805	296987	None	None
L1FLnI_3p12.3g	L1	L1	L1FLnI	chr3	75002401	75012259	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NIPA2P2	ENSG00000241022	71896	CNTN3	ENSG00000113805	481261	None	None
L1FLnI_3p12.3h	L1	L1	L1FLnI	chr3	75037679	75047012	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NIPA2P2	ENSG00000241022	37143	CNTN3	ENSG00000113805	516539	None	None
L1FLnI_3p12.3i	L1	L1	L1FLnI	chr3	75091462	75101514	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL294P	ENSG00000242638	81240	NIPA2P2	ENSG00000241022	6225	None	None
L1FLnI_3p12.3j	L1	L1	L1FLnI	chr3	75091478	75101514	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL294P	ENSG00000242638	81240	NIPA2P2	ENSG00000241022	6241	None	None
L1FLnI_3p12.3k	L1	L1	L1FLnI	chr3	75119351	75129381	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL294P	ENSG00000242638	53373	NIPA2P2	ENSG00000241022	34114	None	None
L1FLnI_3p12.3l	L1	L1	L1FLnI	chr3	75272963	75282970	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MYLKP1	ENSG00000228868	45579	AC117481.1	ENSG00000287398	32193	None	None
L1FLnI_3p12.3m	L1	L1	L1FLnI	chr3	75482960	75493112	-	coding	LINC02018,ENPP7P2	lncRNA,unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000272690,ENSG00000239959	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p12.3n	L1	L1	L1FLnI	chr3	75688194	75697110	+	noncoding	LINC00960,ZNF717	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000242516,ENSG00000227124	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:75691863-75691865
L1FLnI_3p12.3o	L1	L1	L1FLnI	chr3	75793407	75802573	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ROBO2	ENSG00000185008	104122	ZNF717	ENSG00000227124	7824	None	None
L1FLnI_3p12.3p	L1	L1	L1FLnI	chr3	75831258	75841412	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ROBO2	ENSG00000185008	65283	ZNF717	ENSG00000227124	45675	None	None
L1FLnI_3p12.3q	L1	L1	L1FLnI	chr3	75844560	75854626	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ROBO2	ENSG00000185008	52069	ZNF717	ENSG00000227124	58977	None	None
L1FLnI_3p12.3r	L1	L1	L1FLnI	chr3	76210836	76220840	+	coding	ROBO2	protein_coding	SENSE	ENSG00000185008	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p12.3s	L1	L1	L1FLnI	chr3	77210095	77220223	-	coding	ROBO2	protein_coding	ANTISENSE	ENSG00000185008	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_3p12.3	L1	L1	L1FLI	chr3	77762665	77770680	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-217P	ENSG00000206891	41061	ROBO2	ENSG00000185008	112701	None	None
L1FLnI_3p12.3t	L1	L1	L1FLnI	chr3	77838949	77849337	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02077	ENSG00000244461	189368	RNU6-217P	ENSG00000206891	27105	None	None
L1FLnI_3p12.3u	L1	L1	L1FLnI	chr3	77988083	77996817	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02077	ENSG00000244461	41888	RNU6-217P	ENSG00000206891	176239	None	None
L1FLnI_3p12.3v	L1	L1	L1FLnI	chr3	78483538	78493667	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108752.1	ENSG00000240241	188807	MRPS17P3	ENSG00000239226	31434	None	None
L1FLnI_3p12.3w	L1	L1	L1FLnI	chr3	78671686	78681846	+	coding	ROBO1	protein_coding	ANTISENSE	ENSG00000169855	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p12.3x	L1	L1	L1FLnI	chr3	78941028	78951172	+	coding	ROBO1	protein_coding	ANTISENSE	ENSG00000169855	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p12.3y	L1	L1	L1FLnI	chr3	79269275	79278277	+	noncoding	ROBO1	protein_coding	ANTISENSE	ENSG00000169855	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p12.2a	L1	L1	L1FLnI	chr3	80145845	80156220	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OSBPL9P1	ENSG00000271389	7107	HMGB1P38	ENSG00000243877	187703	None	None
L1FLnI_3p12.2b	L1	L1	L1FLnI	chr3	80145845	80155016	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OSBPL9P1	ENSG00000271389	8311	HMGB1P38	ENSG00000243877	187703	None	None
L1FLnI_3p12.2c	L1	L1	L1FLnI	chr3	80891148	80901165	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02027	ENSG00000243694	92689	LINC02050	ENSG00000242781	101760	None	None
L1FLI_3p12.2	L1	L1	L1FLI	chr3	81050377	81058427	-	coding	LINC02027	lncRNA	ANTISENSE	ENSG00000243694	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p12.2d	L1	L1	L1FLnI	chr3	81874625	81884778	+	coding	AC129807.1	lncRNA	SENSE	ENSG00000242009	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p12.2e	L1	L1	L1FLnI	chr3	82104386	82114542	-	coding	LINC02008	lncRNA	ANTISENSE	ENSG00000239440	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p12.2f	L1	L1	L1FLnI	chr3	82218780	82229985	-	noncoding	LINC02008	lncRNA	ANTISENSE	ENSG00000239440	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p12.2g	L1	L1	L1FLnI	chr3	82267906	82277617	-	noncoding	LINC02008	lncRNA	ANTISENSE	ENSG00000239440	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p12.2h	L1	L1	L1FLnI	chr3	82369811	82379934	-	coding	LINC02008	lncRNA	ANTISENSE	ENSG00000239440	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p12.2i	L1	L1	L1FLnI	chr3	82700996	82709763	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYP51A1P1	ENSG00000241095	96752	LINC02008	ENSG00000239440	237321	None	None
L1FLnI_3p12.2j	L1	L1	L1FLnI	chr3	82739709	82749603	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02008	ENSG00000239440	276034	CYP51A1P1	ENSG00000241095	56912	None	None
L1FLnI_3p12.2k	L1	L1	L1FLnI	chr3	82740337	82749603	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02008	ENSG00000239440	276662	CYP51A1P1	ENSG00000241095	56912	None	None
L1FLnI_3p12.2l	L1	L1	L1FLnI	chr3	83104200	83113099	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CYP51A1P1	ENSG00000241095	296179	AC023503.1	ENSG00000288004	271346	None	None
L1FLnI_3p12.2m	L1	L1	L1FLnI	chr3	83243348	83251862	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023503.1	ENSG00000288004	132583	CYP51A1P1	ENSG00000241095	435327	None	None
L1FLnI_3p12.1a	L1	L1	L1FLnI	chr3	84028727	84038295	+	noncoding	AC117464.1	lncRNA	SENSE	ENSG00000287158	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p12.1b	L1	L1	L1FLnI	chr3	84162625	84171317	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00971	ENSG00000242641	467088	AC117464.1	ENSG00000287158	111206	None	None
L1FLnI_3p12.1c	L1	L1	L1FLnI	chr3	84475157	84483880	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117464.1	ENSG00000287158	423738	LINC00971	ENSG00000242641	154525	None	None
L1FLnI_3p12.1d	L1	L1	L1FLnI	chr3	84542465	84552652	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00971	ENSG00000242641	85753	AC117464.1	ENSG00000287158	491046	None	chr3:84548114-84548128
L1FLnI_3p12.1e	L1	L1	L1FLnI	chr3	84757210	84767654	+	noncoding	LINC00971	lncRNA	ANTISENSE	ENSG00000242641	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p12.1f	L1	L1	L1FLnI	chr3	84809269	84819399	-	coding	LINC00971	lncRNA	SENSE	ENSG00000242641	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p12.1g	L1	L1	L1FLnI	chr3	84881479	84891643	+	noncoding	LINC00971,LINC02025	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000242641,ENSG00000242339	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p12.1h	L1	L1	L1FLnI	chr3	85149573	85159354	+	coding	CADM2	protein_coding	SENSE	ENSG00000175161	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p12.1i	L1	L1	L1FLnI	chr3	85223105	85231929	-	noncoding	CADM2	protein_coding	ANTISENSE	ENSG00000175161	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p12.1j	L1	L1	L1FLnI	chr3	85286432	85296440	+	coding	CADM2	protein_coding	SENSE	ENSG00000175161	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p12.1k	L1	L1	L1FLnI	chr3	86035583	86045720	+	coding	CADM2	protein_coding	SENSE	ENSG00000175161	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p12.1l	L1	L1	L1FLnI	chr3	86089465	86099592	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CADM2	ENSG00000175161	15036	AC107024.1	ENSG00000201410	25624	None	None
L1FLnI_3p12.1m	L1	L1	L1FLnI	chr3	86293532	86303674	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108733.1	ENSG00000239767	26108	RN7SKP284	ENSG00000222934	58458	None	None
L1FLnI_3p12.1n	L1	L1	L1FLnI	chr3	86702802	86713004	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108706.1	ENSG00000277746	103736	LINC02070	ENSG00000241328	205806	None	None
L1FLnI_3p12.1o	L1	L1	L1FLnI	chr3	86751589	86760910	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108706.1	ENSG00000277746	55830	LINC02070	ENSG00000241328	254593	None	None
L1FLnI_3p12.1p	L1	L1	L1FLnI	chr3	86870729	86880463	-	noncoding	VGLL3	protein_coding	SENSE	ENSG00000206538	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr3:86876999-86877000,chr3:86880061-86880069
L1FLnI_3p12.1q	L1	L1	L1FLnI	chr3	87013616	87023732	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	VGLL3	ENSG00000206538	22467	PPATP1	ENSG00000241293	27460	None	None
L1FLnI_3p12.1r	L1	L1	L1FLnI	chr3	87091752	87101891	-	coding	AC107204.1	lncRNA	ANTISENSE	ENSG00000281392	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p11.2a	L1	L1	L1FLnI	chr3	87321469	87330713	+	coding	KRT8P25	processed_pseudogene	SENSE	ENSG00000239829	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p11.2b	L1	L1	L1FLnI	chr3	87340028	87350004	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	APOOP2	ENSG00000240902	244834	KRT8P25	ENSG00000239829	15305	None	None
L1FLnI_3p11.2c	L1	L1	L1FLnI	chr3	87386795	87395810	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P25	ENSG00000239829	62072	APOOP2	ENSG00000240902	199028	None	chr3:87388464-87388469
L1FLnI_3p11.2d	L1	L1	L1FLnI	chr3	87647380	87657826	-	coding	AC108749.1	lncRNA	SENSE	ENSG00000239572	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p11.2e	L1	L1	L1FLnI	chr3	87647393	87657826	-	coding	AC108749.1	lncRNA	SENSE	ENSG00000239572	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p11.1a	L1	L1	L1FLnI	chr3	87879380	87888978	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108749.1	ENSG00000239572	85751	RNU6ATAC6P	ENSG00000221059	21242	None	None
L1FLnI_3p11.1b	L1	L1	L1FLnI	chr3	87879380	87888993	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108749.1	ENSG00000239572	85751	RNU6ATAC6P	ENSG00000221059	21227	None	None
L1FLnI_3p11.1c	L1	L1	L1FLnI	chr3	87910358	87920910	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6ATAC6P	ENSG00000221059	13	HTR1F	ENSG00000179097	69786	None	chr3:87916861-87916885
L1FLnI_3p11.1d	L1	L1	L1FLnI	chr3	87910358	87920514	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6ATAC6P	ENSG00000221059	13	HTR1F	ENSG00000179097	70182	None	chr3:87916861-87916885
L1FLnI_3p11.1e	L1	L1	L1FLnI	chr3	88178454	88188595	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	C3orf38	ENSG00000179021	9725	ABCF2P1	ENSG00000242159	128561	None	None
L1FLnI_3p11.1f	L1	L1	L1FLnI	chr3	88502603	88512622	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFA5P5	ENSG00000242365	88439	CSNKA2IP	ENSG00000283434	35009	None	None
L1FLnI_3p11.1g	L1	L1	L1FLnI	chr3	88520523	88529400	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFA5P5	ENSG00000242365	71661	CSNKA2IP	ENSG00000283434	52929	None	None
L1FLnI_3p11.1h	L1	L1	L1FLnI	chr3	88634883	88644217	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ICE2P2	ENSG00000242705	303925	NDUFA5P5	ENSG00000242365	33481	None	None
L1FLnI_3p11.1i	L1	L1	L1FLnI	chr3	88687979	88697197	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFA5P5	ENSG00000242365	86577	ICE2P2	ENSG00000242705	250945	None	None
L1FLnI_3p11.1j	L1	L1	L1FLnI	chr3	88743411	88753647	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFA5P5	ENSG00000242365	142009	ICE2P2	ENSG00000242705	194495	None	None
L1FLnI_3p11.1k	L1	L1	L1FLnI	chr3	88770763	88779572	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFA5P5	ENSG00000242365	169361	ICE2P2	ENSG00000242705	168570	None	None
L1FLnI_3p11.1l	L1	L1	L1FLnI	chr3	88835081	88844154	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ICE2P2	ENSG00000242705	103988	NDUFA5P5	ENSG00000242365	233679	None	None
L1FLnI_3p11.1m	L1	L1	L1FLnI	chr3	88866335	88876363	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFA5P5	ENSG00000242365	264933	ICE2P2	ENSG00000242705	71779	None	None
L1FLnI_3p11.1n	L1	L1	L1FLnI	chr3	89345117	89355140	-	coding	EPHA3	protein_coding	ANTISENSE	ENSG00000044524	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p11.1o	L1	L1	L1FLnI	chr3	89460327	89470356	-	coding	EPHA3	protein_coding	ANTISENSE	ENSG00000044524	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3p11.1p	L1	L1	L1FLnI	chr3	89561821	89570569	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EPHA3	ENSG00000044524	79687	MTCO2P6	ENSG00000240951	17317	None	None
L1FLnI_3p11.1q	L1	L1	L1FLnI	chr3	89744115	89754142	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO1P6	ENSG00000240309	154018	AC095349.1	ENSG00000212598	276142	None	None
L1FLnI_3p11.1r	L1	L1	L1FLnI	chr3	89744115	89754158	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO1P6	ENSG00000240309	154018	AC095349.1	ENSG00000212598	276126	None	None
L1FLnI_3p11.1s	L1	L1	L1FLnI	chr3	89828217	89838375	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO1P6	ENSG00000240309	238120	AC095349.1	ENSG00000212598	191909	None	None
L1FLnI_3p11.1t	L1	L1	L1FLnI	chr3	89868546	89878569	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC095349.1	ENSG00000212598	151715	MTCO1P6	ENSG00000240309	278449	None	None
L1FLnI_3p11.1u	L1	L1	L1FLnI	chr3	89938578	89948613	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC095349.1	ENSG00000212598	81671	MTCO1P6	ENSG00000240309	348481	None	None
L1FLnI_3p11.1v	L1	L1	L1FLnI	chr3	89954335	89964355	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO1P6	ENSG00000240309	364238	AC095349.1	ENSG00000212598	65929	None	None
L1FLnI_3p11.1w	L1	L1	L1FLnI	chr3	89992476	90002610	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO1P6	ENSG00000240309	402379	AC095349.1	ENSG00000212598	27674	None	None
L1FLnI_3p11.1x	L1	L1	L1FLnI	chr3	90104488	90114636	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-712P	ENSG00000222490	69998	AC095349.1	ENSG00000212598	73993	None	None
L1FLnI_3p11.1y	L1	L1	L1FLnI	chr3	90169069	90179098	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-712P	ENSG00000222490	5536	AC095349.1	ENSG00000212598	138574	None	None
L1FLnI_3p11.1z	L1	L1	L1FLnI	chr3	90187166	90197262	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PROS2P	ENSG00000189002	5054	RNU6-712P	ENSG00000222490	2433	None	None
L1FLnI_3p11.1aa	L1	L1	L1FLnI	chr3	90187175	90197262	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PROS2P	ENSG00000189002	5054	RNU6-712P	ENSG00000222490	2442	None	None
L1FLnI_3p11.1ba	L1	L1	L1FLnI	chr3	90306579	90315951	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ABBA01000933.1	ENSG00000283367	1040804	HSPE1P19	ENSG00000271024	44871	None	None
L1FLnI_3p11.1ca	L1	L1	L1FLnI	chr3	90330583	90340603	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HSPE1P19	ENSG00000271024	68875	ABBA01000933.1	ENSG00000283367	1016152	None	None
L1FLnI_3p11.1da	L1	L1	L1FLnI	chr3	90381972	90391951	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ABBA01000933.1	ENSG00000283367	964804	HSPE1P19	ENSG00000271024	120264	None	None
L1FLnI_3p11.1ea	L1	L1	L1FLnI	chr3	90430160	90440181	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ABBA01000933.1	ENSG00000283367	916574	HSPE1P19	ENSG00000271024	168452	None	None
L1FLnI_3q11.1a	L1	L1	L1FLnI	chr3	91287720	91297771	+	NA	None	NA	NA	None	INTERGENIC	NA	NA	HSPE1P19	ENSG00000271024	1026012	ABBA01000933.1	ENSG00000283367	58984	None	None
L1FLnI_3q11.1b	L1	L1	L1FLnI	chr3	91314140	91324263	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ABBA01000933.1	ENSG00000283367	32492	HSPE1P19	ENSG00000271024	1052432	None	None
L1FLnI_3q11.1c	L1	L1	L1FLnI	chr3	91334946	91345179	-	NA	None	NA	NA	None	INTERGENIC	NA	NA	ABBA01000933.1	ENSG00000283367	11576	HSPE1P19	ENSG00000271024	1073238	None	None
L1FLnI_3q11.1d	L1	L1	L1FLnI	chr3	91377250	91386892	-	noncoding	ABBA01000935.2	unprocessed_pseudogene	SENSE	ENSG00000283544	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q11.1e	L1	L1	L1FLnI	chr3	93725581	93734946	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-488P	ENSG00000251727	108818	ABBA01000935.2	ENSG00000283544	2211806	None	None
L1FLnI_3q11.1f	L1	L1	L1FLnI	chr3	93763443	93773464	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ABBA01000935.2	ENSG00000283544	2249668	RNU6-488P	ENSG00000251727	70300	None	None
L1FLnI_3q11.1g	L1	L1	L1FLnI	chr3	93800890	93809762	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-488P	ENSG00000251727	34002	ABBA01000935.2	ENSG00000283544	2287115	None	None
L1FLnI_3q11.1h	L1	L1	L1FLnI	chr3	93829383	93838908	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ABBA01000935.2	ENSG00000283544	2315608	RNU6-488P	ENSG00000251727	4856	None	None
L1FLnI_3q11.1i	L1	L1	L1FLnI	chr3	93846272	93856398	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PROS1	ENSG00000184500	16653	RNU6-488P	ENSG00000251727	2410	None	None
L1FLnI_3q11.1j	L1	L1	L1FLnI	chr3	93946219	93956238	+	coding	PROS1	protein_coding	ANTISENSE	ENSG00000184500	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q11.2a	L1	L1	L1FLnI	chr3	94196738	94207065	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARMC10P1	ENSG00000178660	299701	NSUN3	ENSG00000178694	64906	None	None
L1FLnI_3q11.2b	L1	L1	L1FLnI	chr3	94365197	94374611	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARMC10P1	ENSG00000178660	132155	NSUN3	ENSG00000178694	233365	None	None
L1FLnI_3q11.2c	L1	L1	L1FLnI	chr3	94414450	94424924	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NSUN3	ENSG00000178694	282618	ARMC10P1	ENSG00000178660	81842	None	chr3:94418140-94418145
L1FLnI_3q11.2d	L1	L1	L1FLnI	chr3	94627130	94637279	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ARMC10P1	ENSG00000178660	119510	AC140059.1	ENSG00000242911	298481	None	None
L1FLnI_3q11.2e	L1	L1	L1FLnI	chr3	94637018	94647698	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC140059.1	ENSG00000242911	288062	ARMC10P1	ENSG00000178660	129398	None	None
L1FLnI_3q11.2f	L1	L1	L1FLnI	chr3	94638970	94647698	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC140059.1	ENSG00000242911	288062	ARMC10P1	ENSG00000178660	131350	None	None
L1FLnI_3q11.2g	L1	L1	L1FLnI	chr3	94741971	94751996	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ARMC10P1	ENSG00000178660	234351	AC140059.1	ENSG00000242911	183764	None	None
L1FLnI_3q11.2h	L1	L1	L1FLnI	chr3	94842529	94852537	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ARMC10P1	ENSG00000178660	334909	AC140059.1	ENSG00000242911	83223	None	None
L1FLnI_3q11.2i	L1	L1	L1FLnI	chr3	94940426	94950719	-	noncoding	LINC00879	lncRNA	ANTISENSE	ENSG00000239589	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q11.2j	L1	L1	L1FLnI	chr3	95031457	95042247	-	coding	LINC00879	lncRNA	ANTISENSE	ENSG00000239589	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q11.2k	L1	L1	L1FLnI	chr3	95032477	95042247	-	coding	LINC00879	lncRNA	ANTISENSE	ENSG00000239589	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q11.2l	L1	L1	L1FLnI	chr3	95059303	95069451	-	coding	LINC00879	lncRNA	ANTISENSE	ENSG00000239589	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q11.2m	L1	L1	L1FLnI	chr3	95059316	95069451	-	coding	LINC00879	lncRNA	ANTISENSE	ENSG00000239589	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q11.2n	L1	L1	L1FLnI	chr3	95220689	95230264	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTHFD2P1	ENSG00000244681	424159	RPS18P6	ENSG00000244048	48312	None	None
L1FLnI_3q11.2o	L1	L1	L1FLnI	chr3	95220704	95229874	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTHFD2P1	ENSG00000244681	424549	RPS18P6	ENSG00000244048	48327	None	None
L1FLnI_3q11.2p	L1	L1	L1FLnI	chr3	95641555	95651729	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS18P6	ENSG00000244048	469178	MTHFD2P1	ENSG00000244681	2694	None	None
L1FLnI_3q11.2q	L1	L1	L1FLnI	chr3	95856889	95867036	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTHFD2P1	ENSG00000244681	173696	AC106719.1	ENSG00000286516	49690	None	None
L1FLnI_3q11.2r	L1	L1	L1FLnI	chr3	96087382	96097875	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC106719.1	ENSG00000286516	167830	AC107304.1	ENSG00000271671	146857	None	None
L1FLnI_3q11.2s	L1	L1	L1FLnI	chr3	96512532	96521852	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR8060	ENSG00000278103	152493	AC107015.1	ENSG00000241815	44505	None	None
L1FLnI_3q11.2t	L1	L1	L1FLnI	chr3	96600838	96610987	-	noncoding	RNU6-1094P	snRNA	SENSE	ENSG00000199286	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q11.2u	L1	L1	L1FLnI	chr3	96681336	96690408	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RCC2P5	ENSG00000241018	62777	RPL18AP8	ENSG00000218754	61505	None	None
L1FLnI_3q11.2v	L1	L1	L1FLnI	chr3	96681336	96690279	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RCC2P5	ENSG00000241018	62906	RPL18AP8	ENSG00000218754	61505	None	None
L1FLnI_3q11.2w	L1	L1	L1FLnI	chr3	96936113	96946258	-	coding	EPHA6	protein_coding	ANTISENSE	ENSG00000080224	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q11.2x	L1	L1	L1FLnI	chr3	96978562	96988698	-	coding	EPHA6	protein_coding	ANTISENSE	ENSG00000080224	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q11.2y	L1	L1	L1FLnI	chr3	97003155	97013551	-	noncoding	EPHA6	protein_coding	ANTISENSE	ENSG00000080224	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q11.2z	L1	L1	L1FLnI	chr3	97504691	97515141	-	noncoding	EPHA6	protein_coding	ANTISENSE	ENSG00000080224	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q11.2aa	L1	L1	L1FLnI	chr3	97541596	97551711	-	coding	EPHA6	protein_coding	ANTISENSE	ENSG00000080224	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q11.2ba	L1	L1	L1FLnI	chr3	97611462	97621928	+	coding	EPHA6	protein_coding	SENSE	ENSG00000080224	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q11.2ca	L1	L1	L1FLnI	chr3	97904239	97914273	-	coding	CRYBG3	protein_coding	ANTISENSE	ENSG00000080200	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q11.2da	L1	L1	L1FLnI	chr3	98170585	98180745	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5H15	ENSG00000233412	811	OR5H5P	ENSG00000249321	16466	None	None
L1FLnI_3q11.2ea	L1	L1	L1FLnI	chr3	98292530	98304204	+	noncoding	AC117473.1	lncRNA	SENSE	ENSG00000251088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q11.2fa	L1	L1	L1FLnI	chr3	98403088	98413227	+	noncoding	AC117473.1	lncRNA	SENSE	ENSG00000251088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q11.2ga	L1	L1	L1FLnI	chr3	98417619	98427886	+	noncoding	AC117473.1	lncRNA	SENSE	ENSG00000251088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q11.2ha	L1	L1	L1FLnI	chr3	98417619	98428331	+	noncoding	AC117473.1	lncRNA	SENSE	ENSG00000251088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q12.1a	L1	L1	L1FLnI	chr3	98678487	98688511	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	WWP1P1	ENSG00000244153	17917	ST3GAL6-AS1	ENSG00000239445	17725	None	None
L1FLnI_3q12.1b	L1	L1	L1FLnI	chr3	98678489	98688511	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	WWP1P1	ENSG00000244153	17919	ST3GAL6-AS1	ENSG00000239445	17725	None	None
L1FLnI_3q12.1c	L1	L1	L1FLnI	chr3	98855332	98865366	+	noncoding	DCBLD2	protein_coding	ANTISENSE	ENSG00000057019	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q12.1d	L1	L1	L1FLnI	chr3	99031290	99041432	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC091212.1	ENSG00000239462	12728	ACTG1P13	ENSG00000241305	173792	None	None
L1FLnI_3q12.1e	L1	L1	L1FLnI	chr3	99058183	99068315	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ACTG1P13	ENSG00000241305	146909	AC091212.1	ENSG00000239462	39621	None	None
L1FLnI_3q12.1f	L1	L1	L1FLnI	chr3	99159025	99168555	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091212.1	ENSG00000239462	140463	ACTG1P13	ENSG00000241305	46669	None	None
L1FLnI_3q12.1g	L1	L1	L1FLnI	chr3	99215069	99224970	+	noncoding	ACTG1P13	processed_pseudogene	ANTISENSE	ENSG00000241305	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q12.1h	L1	L1	L1FLnI	chr3	99288097	99297802	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC107297.1	ENSG00000240572	28575	ACTG1P13	ENSG00000241305	71831	None	None
L1FLnI_3q12.1i	L1	L1	L1FLnI	chr3	99298287	99307154	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ACTG1P13	ENSG00000241305	82021	AC107297.1	ENSG00000240572	19223	None	None
L1FLnI_3q12.1j	L1	L1	L1FLnI	chr3	99447238	99456702	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107297.1	ENSG00000240572	120686	AC078828.1	ENSG00000243296	43645	None	None
L1FLnI_3q12.1k	L1	L1	L1FLnI	chr3	99585538	99595497	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107029.1	ENSG00000243089	55553	AC107029.2	ENSG00000244464	2567	None	None
L1FLnI_3q12.1l	L1	L1	L1FLnI	chr3	99585538	99595489	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107029.1	ENSG00000243089	55553	AC107029.2	ENSG00000244464	2575	None	None
L1FLnI_3q12.1m	L1	L1	L1FLnI	chr3	99732648	99742743	-	coding	COL8A1	protein_coding	ANTISENSE	ENSG00000144810	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q12.2a	L1	L1	L1FLnI	chr3	100471879	100480429	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM45A	ENSG00000181458	12190	LNP1	ENSG00000206535	15560	None	None
L1FLnI_3q12.2b	L1	L1	L1FLnI	chr3	100506109	100516141	+	coding	TMEM45A	protein_coding	SENSE	ENSG00000181458	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q12.2c	L1	L1	L1FLnI	chr3	100595101	100604997	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADGRG7	ENSG00000144820	4604	TMEM45A	ENSG00000181458	17657	chr3:100603137-100603320	chr3:100603702-100603705
L1FLnI_3q12.2d	L1	L1	L1FLnI	chr3	100596245	100604997	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADGRG7	ENSG00000144820	4604	TMEM45A	ENSG00000181458	18801	chr3:100603137-100603320	chr3:100603702-100603705
L1FLnI_3q12.2e	L1	L1	L1FLnI	chr3	100674378	100682970	-	noncoding	ADGRG7	protein_coding	ANTISENSE	ENSG00000144820	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q12.2f	L1	L1	L1FLnI	chr3	100684879	100695010	-	coding	ADGRG7	protein_coding	ANTISENSE	ENSG00000144820	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q12.2g	L1	L1	L1FLnI	chr3	101002671	101011598	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ACTR3P3	ENSG00000242573	151496	ABI3BP	ENSG00000154175	9156	None	None
L1FLnI_3q12.2h	L1	L1	L1FLnI	chr3	101055418	101065666	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ACTR3P3	ENSG00000242573	97428	ABI3BP	ENSG00000154175	61903	None	None
L1FLnI_3q12.2i	L1	L1	L1FLnI	chr3	101055932	101065666	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ACTR3P3	ENSG00000242573	97428	ABI3BP	ENSG00000154175	62417	None	None
L1FLnI_3q12.2j	L1	L1	L1FLnI	chr3	101104832	101114976	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ABI3BP	ENSG00000154175	111317	ACTR3P3	ENSG00000242573	48118	None	None
L1FLnI_3q12.2k	L1	L1	L1FLnI	chr3	101106252	101114976	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ABI3BP	ENSG00000154175	112737	ACTR3P3	ENSG00000242573	48118	None	None
L1FLnI_3q12.3a	L1	L1	L1FLnI	chr3	101429407	101438019	+	noncoding	SENP7	protein_coding	ANTISENSE	ENSG00000138468	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q12.3b	L1	L1	L1FLnI	chr3	101445144	101454385	+	noncoding	SENP7	protein_coding	ANTISENSE	ENSG00000138468	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q12.3c	L1	L1	L1FLnI	chr3	101904944	101915339	-	coding	AC020651.2	lncRNA	ANTISENSE	ENSG00000287682	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q12.3d	L1	L1	L1FLnI	chr3	101904944	101914144	-	coding	AC020651.2	lncRNA	ANTISENSE	ENSG00000287682	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q12.3e	L1	L1	L1FLnI	chr3	101918568	101929000	-	noncoding	AC020651.2	lncRNA	ANTISENSE	ENSG00000287682	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr3:101918892-101919080	chr3:101926782-101926813
L1FLnI_3q12.3f	L1	L1	L1FLnI	chr3	102004706	102014855	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC106712.2	ENSG00000241280	6780	ZPLD1	ENSG00000170044	84389	None	None
L1FLnI_3q12.3g	L1	L1	L1FLnI	chr3	102036425	102046553	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC106712.2	ENSG00000241280	38499	ZPLD1	ENSG00000170044	52691	None	None
L1FLnI_3q12.3h	L1	L1	L1FLnI	chr3	102201313	102210598	-	noncoding	ZPLD1	protein_coding	ANTISENSE	ENSG00000170044	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q12.3i	L1	L1	L1FLnI	chr3	102201313	102210588	-	noncoding	ZPLD1	protein_coding	ANTISENSE	ENSG00000170044	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q12.3j	L1	L1	L1FLnI	chr3	102284105	102294174	-	noncoding	ZPLD1	protein_coding	ANTISENSE	ENSG00000170044	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q12.3k	L1	L1	L1FLnI	chr3	102303453	102314503	+	noncoding	ZPLD1	protein_coding	SENSE	ENSG00000170044	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q12.3l	L1	L1	L1FLnI	chr3	102559742	102568379	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC063938.1	ENSG00000241754	52682	ZPLD1	ENSG00000170044	79901	None	None
L1FLnI_3q12.3m	L1	L1	L1FLnI	chr3	102835766	102845922	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-43P	ENSG00000201922	314038	RNU6-461P	ENSG00000201065	80596	None	None
L1FLnI_3q13.11a	L1	L1	L1FLnI	chr3	103108623	103120109	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-461P	ENSG00000201065	353453	RNU1-43P	ENSG00000201922	39851	None	None
L1FLnI_3q13.11b	L1	L1	L1FLnI	chr3	103216950	103226976	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-43P	ENSG00000201922	56826	NDUFA4P2	ENSG00000236691	14011	None	None
L1FLnI_3q13.11c	L1	L1	L1FLnI	chr3	103298736	103307506	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548AB	ENSG00000265328	216527	NDUFA4P2	ENSG00000236691	57506	None	None
L1FLnI_3q13.11d	L1	L1	L1FLnI	chr3	103477653	103487800	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548AB	ENSG00000265328	36233	NDUFA4P2	ENSG00000236691	236423	None	None
L1FLnI_3q13.11e	L1	L1	L1FLnI	chr3	103513479	103522831	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFA4P2	ENSG00000236691	272249	MIR548AB	ENSG00000265328	1202	None	None
L1FLI_3q13.11	L1	L1	L1FLI	chr3	103555523	103563571	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TUBBP11	ENSG00000243195	67090	AC046144.1	ENSG00000240107	15036	None	None
L1FLnI_3q13.11f	L1	L1	L1FLnI	chr3	103623478	103633437	-	noncoding	TUBBP11	processed_pseudogene	ANTISENSE	ENSG00000243195	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.11g	L1	L1	L1FLnI	chr3	104015616	104025176	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUBBP11	ENSG00000243195	384704	RAP1BP2	ENSG00000214405	37863	None	None
L1FLnI_3q13.11h	L1	L1	L1FLnI	chr3	104027062	104036935	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUBBP11	ENSG00000243195	396150	RAP1BP2	ENSG00000214405	26104	None	None
L1FLnI_3q13.11i	L1	L1	L1FLnI	chr3	104300519	104310966	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAP1BP2	ENSG00000214405	236937	AC091804.1	ENSG00000243635	191734	None	None
L1FLnI_3q13.11j	L1	L1	L1FLnI	chr3	104300519	104309502	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAP1BP2	ENSG00000214405	236937	AC091804.1	ENSG00000243635	193198	None	None
L1FLnI_3q13.11k	L1	L1	L1FLnI	chr3	104312497	104322463	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAP1BP2	ENSG00000214405	248915	AC091804.1	ENSG00000243635	180237	None	None
L1FLnI_3q13.11l	L1	L1	L1FLnI	chr3	104312625	104322463	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAP1BP2	ENSG00000214405	249043	AC091804.1	ENSG00000243635	180237	None	None
L1FLnI_3q13.11m	L1	L1	L1FLnI	chr3	104463345	104473476	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC091804.1	ENSG00000243635	29224	RAP1BP2	ENSG00000214405	399763	None	None
L1FLnI_3q13.11n	L1	L1	L1FLnI	chr3	104471247	104479947	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAP1BP2	ENSG00000214405	407665	AC091804.1	ENSG00000243635	22753	chr3:104477741-104478105	None
L1FLnI_3q13.11o	L1	L1	L1FLnI	chr3	104481149	104491615	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAP1BP2	ENSG00000214405	417567	AC091804.1	ENSG00000243635	11085	None	None
L1FLnI_3q13.11p	L1	L1	L1FLnI	chr3	104527000	104536707	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC091804.1	ENSG00000243635	23734	ALCAM	ENSG00000170017	830202	None	None
L1FLnI_3q13.11q	L1	L1	L1FLnI	chr3	104631547	104641814	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091804.1	ENSG00000243635	128281	ALCAM	ENSG00000170017	725095	None	None
L1FLnI_3q13.11r	L1	L1	L1FLnI	chr3	104633052	104641814	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091804.1	ENSG00000243635	129786	ALCAM	ENSG00000170017	725095	None	None
L1FLnI_3q13.11s	L1	L1	L1FLnI	chr3	104690451	104700619	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ALCAM	ENSG00000170017	666290	AC091804.1	ENSG00000243635	187185	None	None
L1FLnI_3q13.11t	L1	L1	L1FLnI	chr3	104966592	104976870	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ALCAM	ENSG00000170017	390039	AC091804.1	ENSG00000243635	463326	None	None
L1FLnI_3q13.11u	L1	L1	L1FLnI	chr3	105292725	105302719	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC091804.1	ENSG00000243635	789459	ALCAM	ENSG00000170017	64190	None	None
L1FLnI_3q13.11v	L1	L1	L1FLnI	chr3	106098086	106108489	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC131237.1	ENSG00000287421	51928	CBLB	ENSG00000114423	228534	None	None
L1FLnI_3q13.11w	L1	L1	L1FLnI	chr3	106217912	106227493	-	coding	AC131237.1	lncRNA	ANTISENSE	ENSG00000287421	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.11x	L1	L1	L1FLnI	chr3	106461886	106471849	-	noncoding	LINC00882	lncRNA	SENSE	ENSG00000242759	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.12a	L1	L1	L1FLnI	chr3	106530368	106540001	+	noncoding	LINC00882	lncRNA	ANTISENSE	ENSG00000242759	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.12b	L1	L1	L1FLnI	chr3	106661795	106671824	+	coding	LINC00882	lncRNA	ANTISENSE	ENSG00000242759	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.12c	L1	L1	L1FLnI	chr3	106971946	106981976	+	coding	LINC00882	lncRNA	ANTISENSE	ENSG00000242759	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.12d	L1	L1	L1FLnI	chr3	107140594	107150746	+	coding	LINC00882	lncRNA	ANTISENSE	ENSG00000242759	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.12e	L1	L1	L1FLnI	chr3	107330246	107340366	+	coding	DUBR,AC063944.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000243701,ENSG00000239828	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.12f	L1	L1	L1FLnI	chr3	107466561	107477006	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01990	ENSG00000273125	2649	BBX	ENSG00000114439	45930	None	None
L1FLnI_3q13.12g	L1	L1	L1FLnI	chr3	107466561	107476989	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01990	ENSG00000273125	2649	BBX	ENSG00000114439	45947	None	None
L1FLnI_3q13.12h	L1	L1	L1FLnI	chr3	107606882	107616681	-	noncoding	BBX	protein_coding	ANTISENSE	ENSG00000114439	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:107616043-107616044
L1FLnI_3q13.12i	L1	L1	L1FLnI	chr3	107691696	107701721	-	noncoding	BBX	protein_coding	ANTISENSE	ENSG00000114439	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.12j	L1	L1	L1FLnI	chr3	107691706	107701721	-	noncoding	BBX	protein_coding	ANTISENSE	ENSG00000114439	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13a	L1	L1	L1FLnI	chr3	108254182	108264196	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	IFT57	ENSG00000114446	31747	HHLA2	ENSG00000114455	32294	None	None
L1FLnI_3q13.13b	L1	L1	L1FLnI	chr3	108365828	108375991	+	coding	HHLA2	protein_coding	SENSE	ENSG00000114455	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13c	L1	L1	L1FLnI	chr3	108652013	108662148	+	coding	DZIP3	protein_coding	SENSE	ENSG00000198919	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13d	L1	L1	L1FLnI	chr3	108745902	108755925	+	coding	RETNLB	protein_coding	ANTISENSE	ENSG00000163515	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_3q13.13	L1	L1	L1FLI	chr3	109198872	109206917	+	coding	LINC00488	lncRNA	SENSE	ENSG00000214381	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13e	L1	L1	L1FLnI	chr3	109499748	109508758	-	coding	LINC01205	lncRNA	ANTISENSE	ENSG00000228980	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13f	L1	L1	L1FLnI	chr3	109507698	109517900	-	coding	LINC01205	lncRNA	ANTISENSE	ENSG00000228980	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13g	L1	L1	L1FLnI	chr3	109534708	109544826	+	coding	LINC01205	lncRNA	SENSE	ENSG00000228980	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13h	L1	L1	L1FLnI	chr3	109644090	109653903	+	coding	LINC01205,AC078980.1	lncRNA,lncRNA	SENSE,SENSE	ENSG00000228980,ENSG00000242029	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13i	L1	L1	L1FLnI	chr3	109661245	109671446	+	coding	LINC01205,AC078980.1	lncRNA,lncRNA	SENSE,SENSE	ENSG00000228980,ENSG00000242029	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13j	L1	L1	L1FLnI	chr3	109756397	109765786	+	coding	AC078980.1	lncRNA	SENSE	ENSG00000242029	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13k	L1	L1	L1FLnI	chr3	109791707	109801406	+	noncoding	AC078980.1	lncRNA	SENSE	ENSG00000242029	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13l	L1	L1	L1FLnI	chr3	109995966	110006000	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117430.1	ENSG00000240895	521482	AC078918.1	ENSG00000243945	18199	None	None
L1FLnI_3q13.13m	L1	L1	L1FLnI	chr3	110005818	110014323	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC078918.1	ENSG00000243945	28051	AC117430.1	ENSG00000240895	513159	None	None
L1FLnI_3q13.13n	L1	L1	L1FLnI	chr3	110436588	110446613	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC078918.1	ENSG00000243945	458821	AC117430.1	ENSG00000240895	80869	None	None
L1FLnI_3q13.13o	L1	L1	L1FLnI	chr3	110452670	110461703	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117430.1	ENSG00000240895	65779	AC078918.1	ENSG00000243945	474903	None	None
L1FLnI_3q13.13p	L1	L1	L1FLnI	chr3	110491216	110501075	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC078918.1	ENSG00000243945	513449	AC117430.1	ENSG00000240895	26407	None	None
L1FLnI_3q13.13q	L1	L1	L1FLnI	chr3	110506295	110516689	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117430.1	ENSG00000240895	10793	AC078918.1	ENSG00000243945	528528	None	None
L1FLnI_3q13.13r	L1	L1	L1FLnI	chr3	110506306	110516689	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117430.1	ENSG00000240895	10793	AC078918.1	ENSG00000243945	528539	None	None
L1FLnI_3q13.13s	L1	L1	L1FLnI	chr3	110557380	110566608	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP29	ENSG00000244722	115678	RNU6ATAC15P	ENSG00000221206	5415	None	None
L1FLnI_3q13.13t	L1	L1	L1FLnI	chr3	110631490	110641551	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP29	ENSG00000244722	40735	RNU6ATAC15P	ENSG00000221206	79525	None	None
L1FLnI_3q13.13u	L1	L1	L1FLnI	chr3	110631517	110641551	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP29	ENSG00000244722	40735	RNU6ATAC15P	ENSG00000221206	79552	None	None
L1FLnI_3q13.13v	L1	L1	L1FLnI	chr3	110667941	110678015	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6ATAC15P	ENSG00000221206	115976	RPSAP29	ENSG00000244722	4271	None	None
L1FLnI_3q13.13w	L1	L1	L1FLnI	chr3	110830366	110839921	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NECTIN3-AS1	ENSG00000242242	48463	AC092909.1	ENSG00000201426	103245	chr3:110830711-110830876	None
L1FLnI_3q13.13x	L1	L1	L1FLnI	chr3	110910939	110920960	-	coding	NECTIN3-AS1	lncRNA	SENSE	ENSG00000242242	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13y	L1	L1	L1FLnI	chr3	110981904	110990917	+	noncoding	NECTIN3-AS1	lncRNA	ANTISENSE	ENSG00000242242	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13z	L1	L1	L1FLnI	chr3	110981978	110990917	+	noncoding	NECTIN3-AS1	lncRNA	ANTISENSE	ENSG00000242242	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13aa	L1	L1	L1FLnI	chr3	110994807	111005248	+	noncoding	NECTIN3-AS1	lncRNA	ANTISENSE	ENSG00000242242	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:110996780-110996918	None
L1FLnI_3q13.13ba	L1	L1	L1FLnI	chr3	111015218	111025245	+	coding	NECTIN3-AS1	lncRNA	ANTISENSE	ENSG00000242242	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13ca	L1	L1	L1FLnI	chr3	111052865	111063337	+	noncoding	NECTIN3-AS1	lncRNA	ANTISENSE	ENSG00000242242	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13da	L1	L1	L1FLnI	chr3	111257555	111266203	+	noncoding	NECTIN3	protein_coding	SENSE	ENSG00000177707	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13ea	L1	L1	L1FLnI	chr3	111294314	111304144	-	noncoding	CD96	protein_coding	ANTISENSE	ENSG00000153283	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13fa	L1	L1	L1FLnI	chr3	111294955	111304144	-	noncoding	CD96	protein_coding	ANTISENSE	ENSG00000153283	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13ga	L1	L1	L1FLnI	chr3	111369308	111379885	+	noncoding	CD96	protein_coding	SENSE	ENSG00000153283	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13ha	L1	L1	L1FLnI	chr3	111377193	111385881	+	noncoding	CD96	protein_coding	SENSE	ENSG00000153283	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13ia	L1	L1	L1FLnI	chr3	111403631	111413076	+	coding	CD96	protein_coding	SENSE	ENSG00000153283	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13ja	L1	L1	L1FLnI	chr3	111440651	111451072	-	noncoding	CD96	protein_coding	ANTISENSE	ENSG00000153283	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13ka	L1	L1	L1FLnI	chr3	111467418	111477765	-	noncoding	CD96,AC092916.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000153283,ENSG00000239311	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13la	L1	L1	L1FLnI	chr3	111484326	111493245	+	coding	CD96,AC092916.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000153283,ENSG00000239311	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.13ma	L1	L1	L1FLnI	chr3	111555705	111565734	-	coding	CD96	protein_coding	ANTISENSE	ENSG00000153283	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.2a	L1	L1	L1FLnI	chr3	111623642	111633395	+	noncoding	CD96	protein_coding	SENSE	ENSG00000153283	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:111627877-111627895
L1FLnI_3q13.2b	L1	L1	L1FLnI	chr3	111752131	111762249	-	coding	PLCXD2,PHLDB2	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000240891,ENSG00000144824	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:111761181-111761772	chr3:111761578-111761609,chr3:111761634-111761635
L1FLnI_3q13.2c	L1	L1	L1FLnI	chr3	111752152	111762249	-	coding	PLCXD2,PHLDB2	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000240891,ENSG00000144824	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:111761181-111761772	chr3:111761578-111761609,chr3:111761634-111761635
L1FLnI_3q13.2d	L1	L1	L1FLnI	chr3	112159771	112169885	-	coding	SLC9C1	protein_coding	SENSE	ENSG00000172139	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.2e	L1	L1	L1FLnI	chr3	112207723	112217859	+	coding	SLC9C1	protein_coding	ANTISENSE	ENSG00000172139	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.2f	L1	L1	L1FLnI	chr3	112232985	112243093	-	coding	SLC9C1	protein_coding	SENSE	ENSG00000172139	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.2g	L1	L1	L1FLnI	chr3	112247577	112258847	+	noncoding	SLC9C1	protein_coding	ANTISENSE	ENSG00000172139	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.2h	L1	L1	L1FLnI	chr3	112658648	112668664	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC048334.1	ENSG00000242308	28244	CCDC80	ENSG00000091986	9118	None	None
L1FLnI_3q13.2i	L1	L1	L1FLnI	chr3	112697495	112706412	+	noncoding	AC048334.1	unprocessed_pseudogene	ANTISENSE	ENSG00000242308	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.2j	L1	L1	L1FLnI	chr3	112720618	112730767	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC048334.1	ENSG00000242308	22912	LINC02042	ENSG00000240893	5680	None	None
L1FLnI_3q13.2k	L1	L1	L1FLnI	chr3	112845200	112853867	+	noncoding	CD200R1L	protein_coding	ANTISENSE	ENSG00000206531	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.2l	L1	L1	L1FLnI	chr3	113363093	113373240	+	noncoding	CFAP44,AC112128.1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000206530,ENSG00000285943	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.2m	L1	L1	L1FLnI	chr3	113468300	113478446	+	coding	AC112128.1,SPICE1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000285943,ENSG00000163611	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.31a	L1	L1	L1FLnI	chr3	114273393	114283406	+	coding	TIGIT	protein_coding	SENSE	ENSG00000181847	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.31b	L1	L1	L1FLnI	chr3	114528191	114538645	+	noncoding	ZBTB20,ZBTB20-AS5	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000181722,ENSG00000242290	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr3:114527981-114528323,chr3:114538219-114538413	chr3:114530639-114530664
L1FLnI_3q13.31c	L1	L1	L1FLnI	chr3	115311797	115321970	-	coding	AC026341.1	lncRNA	ANTISENSE	ENSG00000242880	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.31d	L1	L1	L1FLnI	chr3	115311807	115321970	-	coding	AC026341.1	lncRNA	ANTISENSE	ENSG00000242880	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.31e	L1	L1	L1FLnI	chr3	115452341	115462135	-	noncoding	AC026341.1,AC026341.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000242880,ENSG00000287795	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.31f	L1	L1	L1FLnI	chr3	115452678	115462135	-	noncoding	AC026341.1,AC026341.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000242880,ENSG00000287795	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.31g	L1	L1	L1FLnI	chr3	115528645	115537555	-	noncoding	AC026341.1	lncRNA	ANTISENSE	ENSG00000242880	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.31h	L1	L1	L1FLnI	chr3	115731656	115740364	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LSAMP	ENSG00000185565	61999	GAP43	ENSG00000172020	10166	None	None
L1FLnI_3q13.31i	L1	L1	L1FLnI	chr3	115747907	115757514	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAP43	ENSG00000172020	26417	LSAMP	ENSG00000185565	44849	None	None
L1FLnI_3q13.31j	L1	L1	L1FLnI	chr3	116202887	116212926	-	coding	LSAMP	protein_coding	SENSE	ENSG00000185565	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.31k	L1	L1	L1FLnI	chr3	116202900	116212926	-	coding	LSAMP	protein_coding	SENSE	ENSG00000185565	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.31l	L1	L1	L1FLnI	chr3	116356501	116366526	+	coding	LSAMP,LSAMP-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000185565,ENSG00000240922	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.31m	L1	L1	L1FLnI	chr3	116451698	116461795	+	coding	LSAMP	protein_coding	ANTISENSE	ENSG00000185565	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.31n	L1	L1	L1FLnI	chr3	116534718	116544962	+	noncoding	LSAMP	protein_coding	ANTISENSE	ENSG00000185565	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.31o	L1	L1	L1FLnI	chr3	116935200	116945650	+	noncoding	LSAMP	protein_coding	ANTISENSE	ENSG00000185565	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.31p	L1	L1	L1FLnI	chr3	117354948	117365365	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LSAMP	ENSG00000185565	215559	RNU6-1200P	ENSG00000206889	178840	None	None
L1FLnI_3q13.31q	L1	L1	L1FLnI	chr3	117354948	117365318	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LSAMP	ENSG00000185565	215559	RNU6-1200P	ENSG00000206889	178887	None	None
L1FLnI_3q13.32a	L1	L1	L1FLnI	chr3	117774482	117784641	+	coding	AC092691.1,AC092691.3	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000239268,ENSG00000242816	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.32b	L1	L1	L1FLnI	chr3	118036751	118047422	+	noncoding	AC068633.1	lncRNA	ANTISENSE	ENSG00000243276	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.32c	L1	L1	L1FLnI	chr3	118408531	118418928	+	noncoding	AC068633.1	lncRNA	ANTISENSE	ENSG00000243276	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.32d	L1	L1	L1FLnI	chr3	118454696	118463368	+	coding	AC068633.1	lncRNA	ANTISENSE	ENSG00000243276	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.32e	L1	L1	L1FLnI	chr3	118513239	118523406	+	noncoding	AC068633.1	lncRNA	ANTISENSE	ENSG00000243276	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.32f	L1	L1	L1FLnI	chr3	118603981	118612652	+	noncoding	AC068633.1	lncRNA	ANTISENSE	ENSG00000243276	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.32g	L1	L1	L1FLnI	chr3	118910745	118920771	+	coding	IGSF11	protein_coding	ANTISENSE	ENSG00000144847	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.32h	L1	L1	L1FLnI	chr3	119000972	119010990	-	coding	IGSF11	protein_coding	SENSE	ENSG00000144847	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.32i	L1	L1	L1FLnI	chr3	119041634	119051659	+	coding	IGSF11	protein_coding	ANTISENSE	ENSG00000144847	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.32j	L1	L1	L1FLnI	chr3	119041634	119051649	+	coding	IGSF11	protein_coding	ANTISENSE	ENSG00000144847	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.32k	L1	L1	L1FLnI	chr3	119106088	119116245	-	coding	IGSF11	protein_coding	SENSE	ENSG00000144847	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.32l	L1	L1	L1FLnI	chr3	119126585	119136727	+	noncoding	IGSF11	protein_coding	ANTISENSE	ENSG00000144847	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.32m	L1	L1	L1FLnI	chr3	119160951	119171139	+	coding	AC083800.1	protein_coding	SENSE	ENSG00000251012	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.32n	L1	L1	L1FLnI	chr3	119263517	119273909	+	noncoding	B4GALT4-AS1	lncRNA	SENSE	ENSG00000240254	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.32o	L1	L1	L1FLnI	chr3	119283347	119293510	-	coding	B4GALT4-AS1	lncRNA	ANTISENSE	ENSG00000240254	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.33a	L1	L1	L1FLnI	chr3	119562682	119572817	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073352.2	ENSG00000272967	6395	CD80	ENSG00000121594	3068	chr3:119562039-119563176,chr3:119570265-119570769,chr3:119571723-119572101	chr3:119562872-119562889,chr3:119562890-119562891,chr3:119562910-119562923,chr3:119563075-119563086,chr3:119570441-119570452
L1FLnI_3q13.33b	L1	L1	L1FLnI	chr3	119756028	119764619	+	noncoding	MAATS1,AC069444.2	protein_coding,protein_coding	SENSE,SENSE	ENSG00000183833,ENSG00000285585	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.33c	L1	L1	L1FLnI	chr3	119977731	119987833	+	noncoding	GSK3B	protein_coding	ANTISENSE	ENSG00000082701	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.33d	L1	L1	L1FLnI	chr3	120000278	120010353	+	noncoding	GSK3B	protein_coding	ANTISENSE	ENSG00000082701	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.33e	L1	L1	L1FLnI	chr3	120247174	120255988	+	noncoding	GPR156	protein_coding	ANTISENSE	ENSG00000175697	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.33f	L1	L1	L1FLnI	chr3	120372117	120382140	-	coding	AC063952.1	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000240661	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.33g	L1	L1	L1FLnI	chr3	120537859	120547852	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFB4	ENSG00000065518	48476	AC126182.2	ENSG00000244441	24671	None	None
L1ORF2_3q13.33	L1	L1	L1ORF2	chr3	120572013	120580171	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC126182.2	ENSG00000244441	58825	NDUFB4	ENSG00000065518	16157	None	None
L1FLnI_3q13.33h	L1	L1	L1FLnI	chr3	120732051	120742123	-	coding	RABL3	protein_coding	SENSE	ENSG00000144840	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.33i	L1	L1	L1FLnI	chr3	120732067	120742123	-	coding	RABL3	protein_coding	SENSE	ENSG00000144840	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.33j	L1	L1	L1FLnI	chr3	120895705	120905853	-	coding	AC072026.2	lncRNA	SENSE	ENSG00000286827	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.33k	L1	L1	L1FLnI	chr3	120960776	120970928	-	noncoding	STXBP5L	protein_coding	ANTISENSE	ENSG00000145087	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.33l	L1	L1	L1FLnI	chr3	120973056	120983192	-	coding	STXBP5L	protein_coding	ANTISENSE	ENSG00000145087	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.33m	L1	L1	L1FLnI	chr3	121015436	121024278	+	noncoding	STXBP5L	protein_coding	SENSE	ENSG00000145087	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.33n	L1	L1	L1FLnI	chr3	121057485	121067934	-	noncoding	STXBP5L	protein_coding	ANTISENSE	ENSG00000145087	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.33o	L1	L1	L1FLnI	chr3	121090282	121099491	-	coding	STXBP5L,AC078857.1	protein_coding,processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000145087,ENSG00000243813	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.33p	L1	L1	L1FLnI	chr3	121105744	121116120	-	noncoding	STXBP5L	protein_coding	ANTISENSE	ENSG00000145087	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.33q	L1	L1	L1FLnI	chr3	121163989	121173833	+	coding	STXBP5L	protein_coding	SENSE	ENSG00000145087	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:121169739-121169756
L1FLnI_3q13.33r	L1	L1	L1FLnI	chr3	121163989	121173823	+	coding	STXBP5L	protein_coding	SENSE	ENSG00000145087	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:121169739-121169756
L1FLnI_3q13.33s	L1	L1	L1FLnI	chr3	121211380	121221141	-	noncoding	STXBP5L	protein_coding	ANTISENSE	ENSG00000145087	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.33t	L1	L1	L1FLnI	chr3	121345458	121354977	-	noncoding	STXBP5L	protein_coding	ANTISENSE	ENSG00000145087	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:121354529-121354531
L1FLnI_3q13.33u	L1	L1	L1FLnI	chr3	121350984	121360325	-	coding	STXBP5L,AC079841.1	protein_coding,processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000145087,ENSG00000242103	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:121354529-121354531
L1FLnI_3q13.33v	L1	L1	L1FLnI	chr3	121385905	121396038	-	coding	STXBP5L,AC079841.2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000145087,ENSG00000287022	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.33w	L1	L1	L1FLnI	chr3	121449192	121458895	+	coding	POLQ	protein_coding	ANTISENSE	ENSG00000051341	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.33x	L1	L1	L1FLnI	chr3	121807493	121817938	+	noncoding	IQCB1	protein_coding	ANTISENSE	ENSG00000173226	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.33y	L1	L1	L1FLnI	chr3	121857174	121867328	-	noncoding	EAF2	protein_coding	ANTISENSE	ENSG00000145088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.33z	L1	L1	L1FLnI	chr3	121901862	121912014	-	noncoding	SLC15A2	protein_coding	ANTISENSE	ENSG00000163406	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.33aa	L1	L1	L1FLnI	chr3	121932262	121942286	-	coding	SLC15A2	protein_coding	ANTISENSE	ENSG00000163406	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q13.33ba	L1	L1	L1FLnI	chr3	121958773	121967876	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC15A2	ENSG00000163406	14585	ILDR1	ENSG00000145103	19447	chr3:121958929-121959211	None
L1FLnI_3q13.33ca	L1	L1	L1FLnI	chr3	122041413	122051438	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CD86	ENSG00000114013	3924	AC080098.1	ENSG00000202388	16109	None	None
L1FLnI_3q13.33da	L1	L1	L1FLnI	chr3	122136578	122146728	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC068630.1	ENSG00000287977	25677	CD86	ENSG00000114013	15439	None	None
L1FLnI_3q21.1a	L1	L1	L1FLnI	chr3	122236750	122245256	+	noncoding	CASR	protein_coding	SENSE	ENSG00000036828	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q21.1b	L1	L1	L1FLnI	chr3	122729373	122739522	+	coding	PARP14	protein_coding	SENSE	ENSG00000173193	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q21.1c	L1	L1	L1FLnI	chr3	122729373	122739550	+	coding	PARP14	protein_coding	SENSE	ENSG00000173193	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q21.2a	L1	L1	L1FLnI	chr3	125846312	125856462	+	coding	AC092902.4,LINC02614,ENPP7P4	lncRNA,lncRNA,transcribed_unprocessed_pseudogene	SENSE,ANTISENSE,SENSE	ENSG00000284624,ENSG00000241288,ENSG00000241278	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q21.2b	L1	L1	L1FLnI	chr3	125933140	125943169	+	noncoding	ALG1L	protein_coding	ANTISENSE	ENSG00000189366	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q21.2c	L1	L1	L1FLnI	chr3	125992755	126002307	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ROPN1B	ENSG00000114547	9301	SLC41A3	ENSG00000114544	4048	chr3:125993809-125993986	None
L1FLnI_3q21.3a	L1	L1	L1FLnI	chr3	126328106	126338086	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC063919.2	ENSG00000287440	4700	KLF15	ENSG00000163884	4549	None	None
L1FLnI_3q21.3b	L1	L1	L1FLnI	chr3	126585514	126595277	-	noncoding	AC024558.2	protein_coding	SENSE	ENSG00000288436	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q21.3c	L1	L1	L1FLnI	chr3	126785340	126795113	-	coding	CHCHD6	protein_coding	ANTISENSE	ENSG00000159685	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q21.3d	L1	L1	L1FLnI	chr3	126797576	126807708	+	coding	CHCHD6	protein_coding	SENSE	ENSG00000159685	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.1a	L1	L1	L1FLnI	chr3	130159943	130170060	-	coding	LINC02021,ENPP7P3	lncRNA,processed_pseudogene	ANTISENSE,SENSE	ENSG00000249846,ENSG00000248618	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.1b	L1	L1	L1FLnI	chr3	130550309	130559018	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	COL6A6	ENSG00000206384	1316	COL6A5	ENSG00000172752	65465	None	None
L1FLI_3q22.1	L1	L1	L1FLI	chr3	130627722	130635079	+	coding	COL6A6	protein_coding	SENSE	ENSG00000206384	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.1c	L1	L1	L1FLnI	chr3	130801131	130811313	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PIK3R4	ENSG00000196455	54302	RN7SKP212	ENSG00000222783	455	chr3:130811003-130811075	None
L1FLnI_3q22.1d	L1	L1	L1FLnI	chr3	131100083	131108630	-	noncoding	NEK11	protein_coding	ANTISENSE	ENSG00000114670	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.1e	L1	L1	L1FLnI	chr3	131115480	131125613	-	noncoding	NEK11	protein_coding	ANTISENSE	ENSG00000114670	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:131122520-131122618	None
L1FLnI_3q22.1f	L1	L1	L1FLnI	chr3	131115491	131125613	-	noncoding	NEK11	protein_coding	ANTISENSE	ENSG00000114670	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:131122520-131122618	None
L1FLnI_3q22.1g	L1	L1	L1FLnI	chr3	131207094	131216023	-	noncoding	NEK11	protein_coding	ANTISENSE	ENSG00000114670	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.1h	L1	L1	L1FLnI	chr3	131263088	131273185	-	noncoding	NEK11	protein_coding	ANTISENSE	ENSG00000114670	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.1i	L1	L1	L1FLnI	chr3	131298994	131309483	-	coding	NEK11	protein_coding	ANTISENSE	ENSG00000114670	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.1j	L1	L1	L1FLnI	chr3	131327972	131338125	+	noncoding	NEK11,AC010210.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000114670,ENSG00000250608	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.1k	L1	L1	L1FLnI	chr3	131633236	131642666	+	noncoding	CPNE4	protein_coding	ANTISENSE	ENSG00000196353	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.1l	L1	L1	L1FLnI	chr3	131959457	131969877	+	noncoding	CPNE4	protein_coding	ANTISENSE	ENSG00000196353	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.1m	L1	L1	L1FLnI	chr3	132048358	132057795	-	coding	CPNE4	protein_coding	SENSE	ENSG00000196353	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.1n	L1	L1	L1FLnI	chr3	132096373	132105321	+	coding	CPNE4	protein_coding	ANTISENSE	ENSG00000196353	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.1o	L1	L1	L1FLnI	chr3	132110107	132118986	-	noncoding	CPNE4	protein_coding	SENSE	ENSG00000196353	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.1p	L1	L1	L1FLnI	chr3	132133411	132142253	+	coding	CPNE4	protein_coding	ANTISENSE	ENSG00000196353	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:132136048-132136343	chr3:132136136-132136145
L1FLnI_3q22.1q	L1	L1	L1FLnI	chr3	132370734	132380761	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC020633.1	ENSG00000240890	5761	ACPP	ENSG00000014257	2436	None	chr3:132378527-132378534
L1FLnI_3q22.1r	L1	L1	L1FLnI	chr3	132740646	132750812	-	coding	NPHP3-AS1	lncRNA	ANTISENSE	ENSG00000248724	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.1s	L1	L1	L1FLnI	chr3	132760158	132770152	-	coding	NPHP3-AS1	lncRNA	ANTISENSE	ENSG00000248724	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.1t	L1	L1	L1FLnI	chr3	132849094	132858514	-	noncoding	NPHP3-AS1	lncRNA	ANTISENSE	ENSG00000248724	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_3q22.1	L1	L1	L1ORF2	chr3	132944992	132953038	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC079942.1	ENSG00000249725	61966	NPHP3-AS1	ENSG00000248724	70769	chr3:132952434-132952669	None
L1FLnI_3q22.1u	L1	L1	L1FLnI	chr3	132999021	133009162	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC079942.1	ENSG00000249725	5842	NPHP3-AS1	ENSG00000248724	124798	None	None
L1FLnI_3q22.1v	L1	L1	L1FLnI	chr3	133170208	133180318	+	coding	TMEM108	protein_coding	SENSE	ENSG00000144868	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.1w	L1	L1	L1FLnI	chr3	133170208	133180329	+	coding	TMEM108	protein_coding	SENSE	ENSG00000144868	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.1x	L1	L1	L1FLnI	chr3	133200813	133210935	-	noncoding	TMEM108	protein_coding	ANTISENSE	ENSG00000144868	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.1y	L1	L1	L1FLnI	chr3	133316603	133325195	+	noncoding	TMEM108	protein_coding	SENSE	ENSG00000144868	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.1z	L1	L1	L1FLnI	chr3	133332123	133342773	+	noncoding	TMEM108	protein_coding	SENSE	ENSG00000144868	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.1aa	L1	L1	L1FLnI	chr3	133547839	133557986	+	coding	AC022296.1	snoRNA	SENSE	ENSG00000201827	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.1ba	L1	L1	L1FLnI	chr3	133677723	133687856	+	coding	INHCAP	transcribed_unprocessed_pseudogene	SENSE	ENSG00000242337	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.1ca	L1	L1	L1FLnI	chr3	133723160	133733311	-	coding	INHCAP	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000242337	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.1da	L1	L1	L1FLnI	chr3	133723176	133733311	-	coding	INHCAP	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000242337	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.1ea	L1	L1	L1FLnI	chr3	133731869	133740879	+	coding	INHCAP	transcribed_unprocessed_pseudogene	SENSE	ENSG00000242337	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.2a	L1	L1	L1FLnI	chr3	134117046	134128006	-	noncoding	RYK	protein_coding	SENSE	ENSG00000163785	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.2b	L1	L1	L1FLnI	chr3	134499626	134509317	-	noncoding	CEP63	protein_coding	ANTISENSE	ENSG00000182923	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.2c	L1	L1	L1FLnI	chr3	134581694	134591235	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	EPHB1	ENSG00000154928	6566	CEP63	ENSG00000182923	6677	chr3:134590921-134591326	chr3:134591148-134591154
L1FLnI_3q22.2d	L1	L1	L1FLnI	chr3	135024701	135034749	-	coding	EPHB1	protein_coding	ANTISENSE	ENSG00000154928	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.2e	L1	L1	L1FLnI	chr3	135024711	135034749	-	coding	EPHB1	protein_coding	ANTISENSE	ENSG00000154928	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.2f	L1	L1	L1FLnI	chr3	135061561	135071735	-	noncoding	EPHB1	protein_coding	ANTISENSE	ENSG00000154928	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:135067530-135067565
L1FLnI_3q22.2g	L1	L1	L1FLnI	chr3	135251716	135261730	-	coding	EPHB1,AC092969.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000154928,ENSG00000240086	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.2h	L1	L1	L1FLnI	chr3	135540282	135548792	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092989.1	ENSG00000242222	377099	AC092969.1	ENSG00000240086	100394	None	None
L1FLnI_3q22.2i	L1	L1	L1FLnI	chr3	135581227	135591255	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092969.1	ENSG00000240086	141339	AC092989.1	ENSG00000242222	334636	None	None
L1FLnI_3q22.2j	L1	L1	L1FLnI	chr3	135600744	135610655	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092969.1	ENSG00000240086	160856	AC092989.1	ENSG00000242222	315236	None	None
L1FLnI_3q22.2k	L1	L1	L1FLnI	chr3	135655105	135665108	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092969.1	ENSG00000240086	215217	AC092989.1	ENSG00000242222	260783	None	None
L1FLnI_3q22.2l	L1	L1	L1FLnI	chr3	135812048	135821596	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092969.1	ENSG00000240086	372160	AC092989.1	ENSG00000242222	104295	None	None
L1FLnI_3q22.2m	L1	L1	L1FLnI	chr3	135819093	135828633	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092969.1	ENSG00000240086	379205	AC092989.1	ENSG00000242222	97258	None	None
L1FLnI_3q22.3a	L1	L1	L1FLnI	chr3	136110470	136120799	+	noncoding	PPP2R3A	protein_coding	SENSE	ENSG00000073711	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.3b	L1	L1	L1FLnI	chr3	136110896	136120799	+	noncoding	PPP2R3A	protein_coding	SENSE	ENSG00000073711	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.3c	L1	L1	L1FLnI	chr3	136122522	136132673	+	coding	PPP2R3A	protein_coding	SENSE	ENSG00000073711	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.3d	L1	L1	L1FLnI	chr3	136220809	136230940	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092991.1	ENSG00000244740	14894	PCCB	ENSG00000114054	19400	None	None
L1FLnI_3q22.3e	L1	L1	L1FLnI	chr3	136462453	136471633	+	coding	STAG1	protein_coding	ANTISENSE	ENSG00000118007	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_3q22.3	L1	L1	L1FLI	chr3	136478062	136486105	-	coding	STAG1	protein_coding	SENSE	ENSG00000118007	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.3f	L1	L1	L1FLnI	chr3	136522078	136531885	-	coding	STAG1	protein_coding	SENSE	ENSG00000118007	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.3g	L1	L1	L1FLnI	chr3	136963195	136973236	-	coding	IL20RB,IL20RB-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000174564,ENSG00000249407	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.3h	L1	L1	L1FLnI	chr3	137001280	137011421	-	noncoding	IL20RB	protein_coding	ANTISENSE	ENSG00000174564	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.3i	L1	L1	L1FLnI	chr3	137207533	137217672	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	IL20RB	ENSG00000174564	196448	RNA5SP142	ENSG00000201325	300462	None	None
L1FLnI_3q22.3j	L1	L1	L1FLnI	chr3	137354473	137366093	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP142	ENSG00000201325	152041	IL20RB	ENSG00000174564	343388	None	None
L1FLnI_3q22.3k	L1	L1	L1FLnI	chr3	137371611	137381245	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP142	ENSG00000201325	136889	IL20RB	ENSG00000174564	360526	None	None
L1FLnI_3q22.3l	L1	L1	L1FLnI	chr3	137408974	137419246	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	IL20RB	ENSG00000174564	397889	RNA5SP142	ENSG00000201325	98888	None	None
L1FLnI_3q22.3m	L1	L1	L1FLnI	chr3	137427008	137437194	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	IL20RB	ENSG00000174564	415923	RNA5SP142	ENSG00000201325	80940	None	None
L1ORF2_3q22.3	L1	L1	L1ORF2	chr3	137453939	137461985	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP142	ENSG00000201325	56149	IL20RB	ENSG00000174564	442854	None	None
L1FLnI_3q22.3n	L1	L1	L1FLnI	chr3	137535637	137544788	-	noncoding	AC117440.1	processed_pseudogene	SENSE	ENSG00000243886	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q22.3o	L1	L1	L1FLnI	chr3	137540103	137550288	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117440.1	ENSG00000243886	3961	NPM1P17	ENSG00000242070	173486	None	None
L1FLnI_3q22.3p	L1	L1	L1FLnI	chr3	137540103	137550297	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117440.1	ENSG00000243886	3961	NPM1P17	ENSG00000242070	173477	None	None
L1FLnI_3q22.3q	L1	L1	L1FLnI	chr3	137633216	137643232	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NPM1P17	ENSG00000242070	80542	AC117440.1	ENSG00000243886	97074	None	None
L1FLnI_3q22.3r	L1	L1	L1FLnI	chr3	137650412	137660942	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117440.1	ENSG00000243886	114270	NPM1P17	ENSG00000242070	62832	None	None
L1FLnI_3q22.3s	L1	L1	L1FLnI	chr3	137657085	137667219	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC117440.1	ENSG00000243886	120943	NPM1P17	ENSG00000242070	56555	None	None
L1FLnI_3q22.3t	L1	L1	L1FLnI	chr3	137747204	137757038	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NPM1P17	ENSG00000242070	22661	SOX14	ENSG00000168875	7277	None	None
L1FLnI_3q22.3u	L1	L1	L1FLnI	chr3	137893110	137902764	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSPA8P9	ENSG00000241478	10873	CLDN18	ENSG00000066405	95971	None	None
L1FLnI_3q22.3v	L1	L1	L1FLnI	chr3	137903465	137913918	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSPA8P9	ENSG00000241478	21228	CLDN18	ENSG00000066405	84817	None	None
L1FLnI_3q22.3w	L1	L1	L1FLnI	chr3	137904760	137913918	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSPA8P9	ENSG00000241478	22523	CLDN18	ENSG00000066405	84817	None	None
L1FLnI_3q22.3x	L1	L1	L1FLnI	chr3	137976361	137986449	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HSPA8P9	ENSG00000241478	94124	CLDN18	ENSG00000066405	12286	None	None
L1FLnI_3q22.3y	L1	L1	L1FLnI	chr3	138558546	138567328	+	coding	CEP70	protein_coding	ANTISENSE	ENSG00000114107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q23a	L1	L1	L1FLnI	chr3	139147370	139156217	+	noncoding	MRPS22	protein_coding	SENSE	ENSG00000175110	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q23b	L1	L1	L1FLnI	chr3	139165985	139176099	-	coding	MRPS22	protein_coding	ANTISENSE	ENSG00000175110	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q23c	L1	L1	L1FLnI	chr3	139190146	139200265	-	noncoding	MRPS22	protein_coding	ANTISENSE	ENSG00000175110	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q23d	L1	L1	L1FLnI	chr3	139401064	139411243	+	coding	AC046134.2	lncRNA	SENSE	ENSG00000248932	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q23e	L1	L1	L1FLnI	chr3	139410251	139418939	-	noncoding	AC046134.2	lncRNA	ANTISENSE	ENSG00000248932	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q23f	L1	L1	L1FLnI	chr3	139486911	139496282	-	coding	AC046134.2,ACTG1P1	lncRNA,processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000248932,ENSG00000178631	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q23g	L1	L1	L1FLnI	chr3	139564866	139574985	-	noncoding	AC046134.2,NMNAT3	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000248932,ENSG00000163864	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q23h	L1	L1	L1FLnI	chr3	139587458	139596535	+	coding	AC046134.2,NMNAT3	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000248932,ENSG00000163864	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q23i	L1	L1	L1FLnI	chr3	139876965	139887076	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CLSTN2	ENSG00000158258	48109	AC016933.1	ENSG00000251471	17071	None	None
L1FLnI_3q23j	L1	L1	L1FLnI	chr3	140479453	140489593	-	coding	CLSTN2	protein_coding	ANTISENSE	ENSG00000158258	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:140488659-140488670
L1FLnI_3q23k	L1	L1	L1FLnI	chr3	140601576	140610542	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CLSTN2	ENSG00000158258	24179	AC048346.1	ENSG00000249305	9152	None	None
L1FLnI_3q23l	L1	L1	L1FLnI	chr3	140652093	140662596	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC048346.1	ENSG00000249305	32256	TRIM42	ENSG00000155890	15468	None	None
L1FLnI_3q23m	L1	L1	L1FLnI	chr3	140796739	140807246	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC121333.1	ENSG00000261826	57829	TRIM42	ENSG00000155890	95589	None	None
L1FLnI_3q23n	L1	L1	L1FLnI	chr3	140891575	140900918	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL23AP41	ENSG00000224085	1276	AC121333.1	ENSG00000261826	23792	None	None
L1FLnI_3q23o	L1	L1	L1FLnI	chr3	140929592	140939157	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL23AP41	ENSG00000224085	26941	SLC25A36	ENSG00000114120	2673	None	None
L1FLnI_3q23p	L1	L1	L1FLnI	chr3	140984073	140994170	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC25A36	ENSG00000114120	3078	SPSB4	ENSG00000175093	57177	None	None
L1FLnI_3q23q	L1	L1	L1FLnI	chr3	141134417	141144979	-	coding	SPSB4	protein_coding	ANTISENSE	ENSG00000175093	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q23r	L1	L1	L1FLnI	chr3	141134865	141144979	-	coding	SPSB4	protein_coding	ANTISENSE	ENSG00000175093	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q23s	L1	L1	L1FLnI	chr3	141190840	141201097	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPSB4	ENSG00000175093	42229	PXYLP1	ENSG00000155893	27629	chr3:141200859-141201255	None
L1FLnI_3q23t	L1	L1	L1FLnI	chr3	141295042	141305090	-	coding	PXYLP1,AC117383.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000155893,ENSG00000249417	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:141295060-141295236,chr3:141302758-141303060	chr3:141295075-141295095
L1FLI_3q23	L1	L1	L1FLI	chr3	141756135	141764155	-	coding	AC112504.2	protein_coding	ANTISENSE	ENSG00000285558	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:141763332-141763609	chr3:141763333-141763336
L1FLnI_3q23u	L1	L1	L1FLnI	chr3	142134908	142145002	-	noncoding	TFDP2	protein_coding	SENSE	ENSG00000114126	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q23v	L1	L1	L1FLnI	chr3	142286705	142296732	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GK5	ENSG00000175066	61113	XRN1	ENSG00000114127	9875	None	None
L1FLnI_3q23w	L1	L1	L1FLnI	chr3	142474607	142484734	-	coding	ATR	protein_coding	SENSE	ENSG00000175054	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q24a	L1	L1	L1FLnI	chr3	143386976	143397103	+	coding	SLC9A9	protein_coding	ANTISENSE	ENSG00000181804	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:143389493-143389599	None
L1FLnI_3q24b	L1	L1	L1FLnI	chr3	143617132	143627280	+	coding	SLC9A9,AC073358.1	protein_coding,unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000181804,ENSG00000248374	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q24c	L1	L1	L1FLnI	chr3	143658835	143668988	+	noncoding	SLC9A9	protein_coding	ANTISENSE	ENSG00000181804	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q24d	L1	L1	L1FLnI	chr3	143695748	143705047	+	noncoding	SLC9A9	protein_coding	ANTISENSE	ENSG00000181804	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q24e	L1	L1	L1FLnI	chr3	143695748	143705036	+	noncoding	SLC9A9	protein_coding	ANTISENSE	ENSG00000181804	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q24f	L1	L1	L1FLnI	chr3	143906408	143916878	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC107421.1	ENSG00000235110	50266	DIPK2A	ENSG00000181744	54920	None	None
L1FLnI_3q24g	L1	L1	L1FLnI	chr3	144296249	144304800	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011592.1	ENSG00000280397	137411	RNA5SP144	ENSG00000222778	109229	None	None
L1FLnI_3q24h	L1	L1	L1FLnI	chr3	144614117	144624269	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LARP7P4	ENSG00000244024	899269	AC011592.1	ENSG00000280397	168273	None	None
L1FLnI_3q24i	L1	L1	L1FLnI	chr3	144784816	144795136	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LARP7P4	ENSG00000244024	728402	AC011592.1	ENSG00000280397	338972	None	None
L1FLnI_3q24j	L1	L1	L1FLnI	chr3	144927071	144937970	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011592.1	ENSG00000280397	481227	LARP7P4	ENSG00000244024	585568	None	None
L1FLnI_3q24k	L1	L1	L1FLnI	chr3	144993154	145002373	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LARP7P4	ENSG00000244024	521165	AC011592.1	ENSG00000280397	547310	None	None
L1FLnI_3q24l	L1	L1	L1FLnI	chr3	144993166	145002373	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LARP7P4	ENSG00000244024	521165	AC011592.1	ENSG00000280397	547322	None	None
L1FLnI_3q24m	L1	L1	L1FLnI	chr3	145193173	145201807	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011592.1	ENSG00000280397	747329	LARP7P4	ENSG00000244024	321731	None	None
L1FLnI_3q24n	L1	L1	L1FLnI	chr3	145252119	145262122	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LARP7P4	ENSG00000244024	261416	AC011592.1	ENSG00000280397	806275	None	None
L1FLnI_3q24o	L1	L1	L1FLnI	chr3	145370144	145379881	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011592.1	ENSG00000280397	924300	LARP7P4	ENSG00000244024	143657	None	chr3:145376877-145376878,chr3:145376698-145376704
L1FLnI_3q24p	L1	L1	L1FLnI	chr3	145559990	145568689	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GM2AP1	ENSG00000241695	115883	LARP7P4	ENSG00000244024	35575	None	None
L1FLnI_3q24q	L1	L1	L1FLnI	chr3	145583705	145592365	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LARP7P4	ENSG00000244024	59290	GM2AP1	ENSG00000241695	92207	None	None
L1FLnI_3q24r	L1	L1	L1FLnI	chr3	145874218	145883635	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC055758.2	ENSG00000244358	56277	RPL21P39	ENSG00000239797	49479	None	None
L1FLnI_3q24s	L1	L1	L1FLnI	chr3	145914402	145924552	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL21P39	ENSG00000239797	89663	AC055758.2	ENSG00000244358	15360	None	None
L1FLnI_3q24t	L1	L1	L1FLnI	chr3	145924280	145934291	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL21P39	ENSG00000239797	99541	AC055758.2	ENSG00000244358	5621	None	None
L1FLnI_3q24u	L1	L1	L1FLnI	chr3	146287390	146297541	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC130509.1	ENSG00000243596	45455	PLSCR4	ENSG00000114698	36211	None	None
L1FLnI_3q24v	L1	L1	L1FLnI	chr3	146434279	146444123	-	noncoding	PLSCR2	protein_coding	SENSE	ENSG00000163746	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q24w	L1	L1	L1FLnI	chr3	146442582	146451785	-	noncoding	PLSCR2	protein_coding	SENSE	ENSG00000163746	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q24x	L1	L1	L1FLnI	chr3	146722940	146732110	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PLSCR5	ENSG00000231213	116724	AC092957.1	ENSG00000243620	177575	None	None
L1FLnI_3q24y	L1	L1	L1FLnI	chr3	146940176	146950295	-	coding	AC092957.1	lncRNA	SENSE	ENSG00000243620	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q24z	L1	L1	L1FLnI	chr3	147004183	147013163	-	noncoding	AC092957.1	lncRNA	SENSE	ENSG00000243620	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q24aa	L1	L1	L1FLnI	chr3	147123707	147133783	-	coding	AC092957.1	lncRNA	SENSE	ENSG00000243620	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q24ba	L1	L1	L1FLnI	chr3	147593347	147603456	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092925.1	ENSG00000239661	240667	NPM1P28	ENSG00000240804	1512	None	None
L1FLnI_3q24ca	L1	L1	L1FLnI	chr3	147707296	147717108	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092925.1	ENSG00000239661	127015	NPM1P28	ENSG00000240804	115461	None	None
L1FLnI_3q24da	L1	L1	L1FLnI	chr3	148343774	148353908	+	coding	LINC02046	lncRNA	SENSE	ENSG00000242440	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q24ea	L1	L1	L1FLnI	chr3	148474741	148484799	+	noncoding	AC069410.1	lncRNA	ANTISENSE	ENSG00000285557	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q24fa	L1	L1	L1FLnI	chr3	148627140	148637901	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069410.1	ENSG00000285557	35213	RPL38P1	ENSG00000241993	58093	None	None
L1FLnI_3q24ga	L1	L1	L1FLnI	chr3	148780139	148790267	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CPB1	ENSG00000153002	835	AGTR1	ENSG00000144891	37131	None	None
L1FLnI_3q25.1a	L1	L1	L1FLnI	chr3	150503986	150512536	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TSC22D2	ENSG00000196428	37555	SERP1	ENSG00000120742	29462	None	None
L1FLnI_3q25.1b	L1	L1	L1FLnI	chr3	150708340	150717104	+	noncoding	ERICH6-AS1	lncRNA	SENSE	ENSG00000240137	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.1c	L1	L1	L1FLnI	chr3	151238274	151248272	+	coding	MED12L,P2RY14	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000144893,ENSG00000174944	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:151247984-151247988
L1FLnI_3q25.1d	L1	L1	L1FLnI	chr3	151480013	151490477	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRPL42P6	ENSG00000242810	3839	AC117454.1	ENSG00000242119	9162	None	None
L1FLnI_3q25.1e	L1	L1	L1FLnI	chr3	151505992	151516131	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC117454.1	ENSG00000242119	6186	MIR5186	ENSG00000264330	49745	None	None
L1FLnI_3q25.1f	L1	L1	L1FLnI	chr3	151524908	151535301	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC117454.1	ENSG00000242119	25102	MIR5186	ENSG00000264330	30575	None	None
L1FLnI_3q25.1g	L1	L1	L1FLnI	chr3	151524908	151535296	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC117454.1	ENSG00000242119	25102	MIR5186	ENSG00000264330	30580	None	None
L1FLnI_3q25.1h	L1	L1	L1FLnI	chr3	151569238	151579362	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02066	ENSG00000241151	57812	MIR5186	ENSG00000264330	3243	None	None
L1FLnI_3q25.1i	L1	L1	L1FLnI	chr3	151845760	151856215	-	noncoding	AADACL2-AS1	lncRNA	SENSE	ENSG00000242908	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.2a	L1	L1	L1FLnI	chr3	152684757	152694622	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092924.2	ENSG00000287706	5307	ATP5MGP5	ENSG00000242561	105812	chr3:152691803-152691956	None
L1FLnI_3q25.2b	L1	L1	L1FLnI	chr3	152744057	152752587	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092924.2	ENSG00000287706	64607	ATP5MGP5	ENSG00000242561	47847	None	None
L1FLnI_3q25.2c	L1	L1	L1FLnI	chr3	152977203	152986904	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	P2RY1	ENSG00000169860	135764	HMGN2P13	ENSG00000241810	80374	None	None
L1FLnI_3q25.2d	L1	L1	L1FLnI	chr3	153235258	153245282	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC078788.1	ENSG00000241220	111825	RN7SL300P	ENSG00000265813	35241	chr3:153245110-153245416	None
L1FLnI_3q25.2e	L1	L1	L1FLnI	chr3	153502905	153512905	+	noncoding	LINC02006	lncRNA	ANTISENSE	ENSG00000238755	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.2f	L1	L1	L1FLnI	chr3	153636728	153646852	+	noncoding	LINC02006	lncRNA	ANTISENSE	ENSG00000238755	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.2g	L1	L1	L1FLnI	chr3	153793306	153803456	+	coding	LINC02006	lncRNA	ANTISENSE	ENSG00000238755	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.2h	L1	L1	L1FLnI	chr3	153909410	153919258	+	noncoding	LINC02006,AC068985.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000238755,ENSG00000243486	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.2i	L1	L1	L1FLnI	chr3	153982904	153993027	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC068985.1	ENSG00000201398	14340	LINC02006	ENSG00000238755	2718	None	None
L1FLnI_3q25.2j	L1	L1	L1FLnI	chr3	154259107	154269224	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARHGEF26	ENSG00000114790	1280	DHX36	ENSG00000174953	3322	None	None
L1FLnI_3q25.2k	L1	L1	L1FLnI	chr3	154386108	154395399	+	noncoding	GPR149	protein_coding	ANTISENSE	ENSG00000174948	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.2l	L1	L1	L1FLnI	chr3	154405426	154414817	+	noncoding	GPR149	protein_coding	ANTISENSE	ENSG00000174948	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.2m	L1	L1	L1FLnI	chr3	154433082	154443220	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092994.1	ENSG00000243861	68315	GPR149	ENSG00000174948	2892	None	None
L1FLnI_3q25.2n	L1	L1	L1FLnI	chr3	154482995	154493396	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GPR149	ENSG00000174948	52805	AC092994.1	ENSG00000243861	18139	None	None
L1FLnI_3q25.2o	L1	L1	L1FLnI	chr3	154633332	154641916	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SYPL1P1	ENSG00000243154	9740	AC092994.1	ENSG00000243861	94023	None	None
L1FLnI_3q25.2p	L1	L1	L1FLnI	chr3	154745684	154757290	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL9P15	ENSG00000240601	68565	AC073359.2	ENSG00000243969	69726	None	None
L1FLnI_3q25.2q	L1	L1	L1FLnI	chr3	154819497	154829590	-	noncoding	AC073359.2	lncRNA	SENSE	ENSG00000243969	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.2r	L1	L1	L1FLnI	chr3	154871532	154881648	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073359.2	ENSG00000243969	10515	AC073359.1	ENSG00000243953	87635	None	None
L1FLnI_3q25.2s	L1	L1	L1FLnI	chr3	154941662	154951813	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073359.2	ENSG00000243969	80645	AC073359.1	ENSG00000243953	17470	None	None
L1FLnI_3q25.2t	L1	L1	L1FLnI	chr3	154941662	154951800	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073359.2	ENSG00000243969	80645	AC073359.1	ENSG00000243953	17483	None	None
L1ORF2_3q25.2	L1	L1	L1ORF2	chr3	155118404	155126446	-	coding	MME	protein_coding	ANTISENSE	ENSG00000196549	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:155125472-155125474
L1FLnI_3q25.2u	L1	L1	L1FLnI	chr3	155220211	155229548	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01487	ENSG00000241336	11371	MME	ENSG00000196549	36482	None	None
L1FLnI_3q25.2v	L1	L1	L1FLnI	chr3	155233558	155244196	-	noncoding	LINC01487	lncRNA	ANTISENSE	ENSG00000241336	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:155240926-155240961
L1FLnI_3q25.31a	L1	L1	L1FLnI	chr3	155465564	155475588	+	coding	PLCH1	protein_coding	ANTISENSE	ENSG00000114805	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.31b	L1	L1	L1FLnI	chr3	155505853	155515716	-	coding	PLCH1	protein_coding	SENSE	ENSG00000114805	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.31c	L1	L1	L1FLnI	chr3	155532358	155541893	+	noncoding	PLCH1	protein_coding	ANTISENSE	ENSG00000114805	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.31d	L1	L1	L1FLnI	chr3	155538395	155548549	+	coding	PLCH1	protein_coding	ANTISENSE	ENSG00000114805	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.31e	L1	L1	L1FLnI	chr3	155617166	155626712	+	noncoding	PLCH1	protein_coding	ANTISENSE	ENSG00000114805	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.31f	L1	L1	L1FLnI	chr3	155997572	156008049	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VN2R1P	ENSG00000174930	11597	SETP14	ENSG00000240489	9396	None	None
L1FLnI_3q25.31g	L1	L1	L1FLnI	chr3	156063512	156073133	-	noncoding	KCNAB1	protein_coding	ANTISENSE	ENSG00000169282	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.31h	L1	L1	L1FLnI	chr3	156063512	156072699	-	noncoding	KCNAB1	protein_coding	ANTISENSE	ENSG00000169282	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.31i	L1	L1	L1FLnI	chr3	156194280	156204795	-	noncoding	KCNAB1,AC091607.2	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000169282,ENSG00000287916	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.31j	L1	L1	L1FLnI	chr3	156278475	156288490	-	coding	KCNAB1,AC091607.2	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000169282,ENSG00000287916	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.31k	L1	L1	L1FLnI	chr3	156962644	156973006	+	coding	LEKR1	protein_coding	SENSE	ENSG00000197980	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.32a	L1	L1	L1FLnI	chr3	157336548	157346669	+	coding	AC092944.1,VEPH1	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000243176,ENSG00000197415	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.32b	L1	L1	L1FLnI	chr3	157546773	157555932	-	noncoding	SLC66A1L	protein_coding	ANTISENSE	ENSG00000174899	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.32c	L1	L1	L1FLnI	chr3	157681707	157691819	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC66A1L	ENSG00000174899	3958	AC079943.2	ENSG00000242536	123003	None	None
L1FLnI_3q25.32d	L1	L1	L1FLnI	chr3	157721199	157731223	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC66A1L	ENSG00000174899	43450	AC079943.2	ENSG00000242536	83599	None	None
L1FLnI_3q25.32e	L1	L1	L1FLnI	chr3	157798037	157807740	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC079943.2	ENSG00000242536	7082	SLC66A1L	ENSG00000174899	120288	None	None
L1FLnI_3q25.32f	L1	L1	L1FLnI	chr3	157875835	157885999	+	coding	AC079943.2	lncRNA	ANTISENSE	ENSG00000242536	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.32g	L1	L1	L1FLnI	chr3	157893321	157903343	+	coding	AC079943.2	lncRNA	ANTISENSE	ENSG00000242536	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.32h	L1	L1	L1FLnI	chr3	158016178	158026204	+	coding	AC079943.2	lncRNA	ANTISENSE	ENSG00000242536	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.32i	L1	L1	L1FLnI	chr3	158030655	158040129	+	coding	AC079943.2	lncRNA	ANTISENSE	ENSG00000242536	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.32j	L1	L1	L1FLnI	chr3	158323737	158333863	-	coding	RSRC1	protein_coding	ANTISENSE	ENSG00000174891	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:158330978-158331270	None
L1FLnI_3q25.32k	L1	L1	L1FLnI	chr3	158498889	158507902	-	coding	RSRC1	protein_coding	ANTISENSE	ENSG00000174891	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.32l	L1	L1	L1FLnI	chr3	158510610	158520623	-	coding	RSRC1	protein_coding	ANTISENSE	ENSG00000174891	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:158517792-158517798
L1FLnI_3q25.32m	L1	L1	L1FLnI	chr3	158631025	158641040	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC025033.1	ENSG00000243165	4176	GFM1	ENSG00000168827	3238	None	None
L1FLnI_3q25.32n	L1	L1	L1FLnI	chr3	158853159	158862098	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092999.1	ENSG00000279311	7800	GPR79	ENSG00000232374	11199	None	None
L1FLnI_3q25.32o	L1	L1	L1FLnI	chr3	158933145	158943085	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092999.1	ENSG00000279311	61324	IQCJ-SCHIP1	ENSG00000283154	19150	None	None
L1FLnI_3q25.32p	L1	L1	L1FLnI	chr3	158985105	158995530	-	noncoding	IQCJ-SCHIP1,IQCJ	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000283154,ENSG00000214216	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.32q	L1	L1	L1FLnI	chr3	158985109	158995530	-	noncoding	IQCJ-SCHIP1,IQCJ	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000283154,ENSG00000214216	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.32r	L1	L1	L1FLnI	chr3	159084418	159093838	-	coding	IQCJ-SCHIP1,IQCJ	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000283154,ENSG00000214216	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_3q25.32	L1	L1	L1FLI	chr3	159094351	159102396	-	coding	IQCJ-SCHIP1,IQCJ	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000283154,ENSG00000214216	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.33a	L1	L1	L1FLnI	chr3	159391812	159401852	-	coding	IQCJ-SCHIP1	protein_coding	ANTISENSE	ENSG00000283154	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.33b	L1	L1	L1FLnI	chr3	159419568	159429708	+	coding	IQCJ-SCHIP1	protein_coding	SENSE	ENSG00000283154	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.33c	L1	L1	L1FLnI	chr3	159487624	159497761	+	coding	IQCJ-SCHIP1	protein_coding	SENSE	ENSG00000283154	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.33d	L1	L1	L1FLnI	chr3	159504980	159515116	-	coding	IQCJ-SCHIP1	protein_coding	ANTISENSE	ENSG00000283154	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.33e	L1	L1	L1FLnI	chr3	159568672	159578734	-	coding	IQCJ-SCHIP1	protein_coding	ANTISENSE	ENSG00000283154	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.33f	L1	L1	L1FLnI	chr3	159710767	159720897	+	noncoding	IQCJ-SCHIP1,AC092943.2	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000283154,ENSG00000286913	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.33g	L1	L1	L1FLnI	chr3	160113898	160122584	+	noncoding	IL12A-AS1	lncRNA	ANTISENSE	ENSG00000244040	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.33h	L1	L1	L1FLnI	chr3	160355965	160365512	+	noncoding	AC079594.2,IFT80	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000248710,ENSG00000068885	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q25.33i	L1	L1	L1FLnI	chr3	160583354	160594055	+	noncoding	RPL6P8	processed_pseudogene	SENSE	ENSG00000242285	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.1a	L1	L1	L1FLnI	chr3	161189817	161199776	-	noncoding	NMD3	protein_coding	ANTISENSE	ENSG00000169251	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.1b	L1	L1	L1FLnI	chr3	161703296	161713695	+	noncoding	AC112770.1	lncRNA	SENSE	ENSG00000288087	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.1c	L1	L1	L1FLnI	chr3	161840592	161849453	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TOMM22P6	ENSG00000241874	637088	AC131211.1	ENSG00000240354	18684	None	None
L1FLnI_3q26.1d	L1	L1	L1FLnI	chr3	161840595	161849453	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TOMM22P6	ENSG00000241874	637088	AC131211.1	ENSG00000240354	18687	None	None
L1FLnI_3q26.1e	L1	L1	L1FLnI	chr3	162405368	162415393	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TOMM22P6	ENSG00000241874	71148	AC131211.1	ENSG00000240354	583460	None	None
L1FLnI_3q26.1f	L1	L1	L1FLnI	chr3	162864303	162873044	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC128716.1	ENSG00000243044	262511	AC128685.1	ENSG00000241168	153352	None	None
L1FLnI_3q26.1g	L1	L1	L1FLnI	chr3	163169233	163177897	-	noncoding	AC128685.1,LINC01192	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000241168,ENSG00000241369	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.1h	L1	L1	L1FLnI	chr3	163233443	163243462	+	coding	LINC01192	lncRNA	ANTISENSE	ENSG00000241369	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.1i	L1	L1	L1FLnI	chr3	163299600	163311204	+	noncoding	LINC01192	lncRNA	ANTISENSE	ENSG00000241369	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.1j	L1	L1	L1FLnI	chr3	163351250	163360708	-	coding	LINC01192	lncRNA	SENSE	ENSG00000241369	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.1k	L1	L1	L1FLnI	chr3	163426209	163435735	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01192	ENSG00000241369	64646	AC079910.1	ENSG00000240792	19833	chr3:163435483-163435503	None
L1FLnI_3q26.1l	L1	L1	L1FLnI	chr3	163665244	163675625	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084017.1	ENSG00000214210	325981	AC079910.1	ENSG00000240792	185744	None	None
L1FLnI_3q26.1m	L1	L1	L1FLnI	chr3	164156985	164167388	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1263	ENSG00000221251	4083	AC084017.1	ENSG00000214210	154520	None	None
L1FLnI_3q26.1n	L1	L1	L1FLnI	chr3	164189123	164199050	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1263	ENSG00000221251	17567	LINC01323	ENSG00000241636	471828	None	None
L1FLnI_3q26.1o	L1	L1	L1FLnI	chr3	164274533	164283155	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1263	ENSG00000221251	102977	LINC01323	ENSG00000241636	387723	chr3:164276046-164276147	None
L1FLnI_3q26.1p	L1	L1	L1FLnI	chr3	164288027	164296926	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1263	ENSG00000221251	116471	LINC01323	ENSG00000241636	373952	None	None
L1FLnI_3q26.1q	L1	L1	L1FLnI	chr3	164515277	164524551	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01323	ENSG00000241636	146327	MIR1263	ENSG00000221251	343721	None	None
L1FLnI_3q26.1r	L1	L1	L1FLnI	chr3	164699107	164709138	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01323	ENSG00000241636	13031	LINC01324	ENSG00000241767	4957	None	None
L1FLnI_3q26.1s	L1	L1	L1FLnI	chr3	165117321	165125973	-	coding	AC140119.1	misc_RNA	SENSE	ENSG00000200052	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.1t	L1	L1	L1FLnI	chr3	165133920	165144004	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02023	ENSG00000239205	6002	AC140119.1	ENSG00000200052	11097	None	None
L1FLnI_3q26.1u	L1	L1	L1FLnI	chr3	165163339	165173455	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLITRK3	ENSG00000121871	13265	LINC02023	ENSG00000239205	5277	None	None
L1FLnI_3q26.1v	L1	L1	L1FLnI	chr3	165568833	165578854	+	coding	LINC01322	lncRNA	SENSE	ENSG00000244128	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:165569216-165569290	None
L1FLnI_3q26.1w	L1	L1	L1FLnI	chr3	165868705	165879221	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTND4P17	ENSG00000242178	280800	LINC01322	ENSG00000244128	22186	None	None
L1FLnI_3q26.1x	L1	L1	L1FLnI	chr3	166020602	166030624	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTND4P17	ENSG00000242178	129397	LINC01322	ENSG00000244128	174083	None	None
L1FLnI_3q26.1y	L1	L1	L1FLnI	chr3	166129280	166140750	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTND4P17	ENSG00000242178	19271	LINC01322	ENSG00000244128	282761	None	None
L1FLnI_3q26.1z	L1	L1	L1FLnI	chr3	166129280	166138408	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTND4P17	ENSG00000242178	21613	LINC01322	ENSG00000244128	282761	None	None
L1FLnI_3q26.1aa	L1	L1	L1FLnI	chr3	166424718	166433384	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104629.1	ENSG00000244429	130365	LINC01326	ENSG00000244321	136309	None	None
L1FLnI_3q26.1ba	L1	L1	L1FLnI	chr3	166554707	166564336	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01326	ENSG00000244321	5357	AC104629.1	ENSG00000244429	260354	None	None
L1FLnI_3q26.1ca	L1	L1	L1FLnI	chr3	166613953	166624081	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC072046.2	ENSG00000274149	8498	RN7SKP298	ENSG00000251759	45948	None	None
L1FLnI_3q26.1da	L1	L1	L1FLnI	chr3	166649612	166658128	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC072046.2	ENSG00000274149	44157	RN7SKP298	ENSG00000251759	11901	None	None
L1FLnI_3q26.1ea	L1	L1	L1FLnI	chr3	166777475	166787121	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CBX1P5	ENSG00000231516	23888	AC072046.1	ENSG00000240458	55865	None	None
L1FLnI_3q26.1fa	L1	L1	L1FLnI	chr3	166903242	166913585	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP74	ENSG00000220343	152246	AC069439.1	ENSG00000239227	41132	None	None
L1FLnI_3q26.1ga	L1	L1	L1FLnI	chr3	167125854	167136028	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP74	ENSG00000220343	59534	ZBBX	ENSG00000169064	104259	None	None
L1FLnI_3q26.1ha	L1	L1	L1FLnI	chr3	167209131	167218390	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP74	ENSG00000220343	142811	ZBBX	ENSG00000169064	21897	None	None
L1FLnI_3q26.1ia	L1	L1	L1FLnI	chr3	167271769	167281766	+	coding	ZBBX	protein_coding	ANTISENSE	ENSG00000169064	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.1ja	L1	L1	L1FLnI	chr3	167285816	167296187	+	coding	ZBBX	protein_coding	ANTISENSE	ENSG00000169064	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.1ka	L1	L1	L1FLnI	chr3	167508037	167517633	+	noncoding	WDR49	protein_coding	ANTISENSE	ENSG00000174776	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr3:167512210-167512214
L1FLnI_3q26.1la	L1	L1	L1FLnI	chr3	167587309	167595925	-	coding	WDR49	protein_coding	SENSE	ENSG00000174776	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.1ma	L1	L1	L1FLnI	chr3	167705667	167717063	+	noncoding	PDCD10	protein_coding	ANTISENSE	ENSG00000114209	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.2a	L1	L1	L1FLnI	chr3	168007534	168017555	+	coding	GOLIM4	protein_coding	ANTISENSE	ENSG00000173905	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr3:168009423-168009431
L1FLnI_3q26.2b	L1	L1	L1FLnI	chr3	168124798	168134940	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GOLIM4	ENSG00000173905	28874	EGFEM1P	ENSG00000206120	114582	None	None
L1FLnI_3q26.2c	L1	L1	L1FLnI	chr3	168726662	168736450	+	noncoding	EGFEM1P	transcribed_unitary_pseudogene	SENSE	ENSG00000206120	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.2d	L1	L1	L1FLnI	chr3	168763951	168773663	-	coding	EGFEM1P	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000206120	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.2e	L1	L1	L1FLnI	chr3	169675989	169686017	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MECOM	ENSG00000085276	12214	AC007849.2	ENSG00000244381	23278	None	None
L1FLnI_3q26.2f	L1	L1	L1FLnI	chr3	170616324	170625407	-	noncoding	AC026316.4,SLC7A14-AS1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000285218,ENSG00000285051	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.2g	L1	L1	L1FLnI	chr3	170644610	170655101	-	noncoding	AC026316.4,SLC7A14-AS1,AC026316.1	protein_coding,lncRNA,processed_pseudogene	ANTISENSE,ANTISENSE,SENSE	ENSG00000285218,ENSG00000285051,ENSG00000213174	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:170654159-170654167
L1FLnI_3q26.2h	L1	L1	L1FLnI	chr3	170661889	170672026	-	coding	AC026316.4,SLC7A14-AS1,AC026316.3	protein_coding,lncRNA,lncRNA	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000285218,ENSG00000285051,ENSG00000244738	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.2i	L1	L1	L1FLnI	chr3	170878058	170888084	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	EIF5A2	ENSG00000163577	334	RPL22L1	ENSG00000163584	7850	None	None
L1FLnI_3q26.2j	L1	L1	L1FLnI	chr3	170924416	170933770	-	coding	AC061708.1	lncRNA	ANTISENSE	ENSG00000286856	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.2k	L1	L1	L1FLnI	chr3	170924441	170933770	-	coding	AC061708.1	lncRNA	ANTISENSE	ENSG00000286856	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.2l	L1	L1	L1FLnI	chr3	170932419	170942572	-	coding	AC061708.1	lncRNA	ANTISENSE	ENSG00000286856	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.2m	L1	L1	L1FLnI	chr3	170969290	170979236	-	noncoding	AC061708.1	lncRNA	ANTISENSE	ENSG00000286856	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:170977796-170978130,chr3:170978611-170978899	None
L1FLnI_3q26.31a	L1	L1	L1FLnI	chr3	171621582	171633249	+	coding	PLD1	protein_coding	ANTISENSE	ENSG00000075651	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.31b	L1	L1	L1FLnI	chr3	172659495	172669610	-	noncoding	NCEH1	protein_coding	SENSE	ENSG00000144959	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:172659486-172659587	chr3:172666456-172666460
L1FLnI_3q26.31c	L1	L1	L1FLnI	chr3	173143805	173152437	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPATA16	ENSG00000144962	2570	AC068759.1	ENSG00000237473	1300	None	None
L1FLnI_3q26.31d	L1	L1	L1FLnI	chr3	173293232	173303821	-	noncoding	AC068759.1	lncRNA	ANTISENSE	ENSG00000237473	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.31e	L1	L1	L1FLnI	chr3	173424794	173433867	-	noncoding	NLGN1	protein_coding	ANTISENSE	ENSG00000169760	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.31f	L1	L1	L1FLnI	chr3	173445564	173455701	-	coding	NLGN1	protein_coding	ANTISENSE	ENSG00000169760	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.31g	L1	L1	L1FLnI	chr3	174162935	174173729	-	noncoding	NLGN1	protein_coding	ANTISENSE	ENSG00000169760	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.31h	L1	L1	L1FLnI	chr3	174259187	174269194	-	coding	NLGN1	protein_coding	ANTISENSE	ENSG00000169760	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.31i	L1	L1	L1FLnI	chr3	174448830	174458045	+	noncoding	NAALADL2	protein_coding	SENSE	ENSG00000177694	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.31j	L1	L1	L1FLnI	chr3	174601676	174611825	+	coding	NAALADL2	protein_coding	SENSE	ENSG00000177694	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.31k	L1	L1	L1FLnI	chr3	174937518	174948556	-	noncoding	NAALADL2	protein_coding	ANTISENSE	ENSG00000177694	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.31l	L1	L1	L1FLnI	chr3	175781212	175791237	-	coding	NAALADL2	protein_coding	ANTISENSE	ENSG00000177694	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.31m	L1	L1	L1FLnI	chr3	175781212	175790258	-	coding	NAALADL2	protein_coding	ANTISENSE	ENSG00000177694	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.31n	L1	L1	L1FLnI	chr3	175982459	175991007	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EI24P1	ENSG00000236357	77035	ACTG1P23	ENSG00000230362	3889	None	None
L1FLnI_3q26.32a	L1	L1	L1FLnI	chr3	176012625	176022684	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ACTG1P23	ENSG00000230362	34055	EI24P1	ENSG00000236357	45358	None	None
L1FLnI_3q26.32b	L1	L1	L1FLnI	chr3	176155578	176165990	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC117434.1	ENSG00000238026	41041	LINC01208	ENSG00000223715	249449	None	None
L1FLnI_3q26.32c	L1	L1	L1FLnI	chr3	176155578	176166396	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC117434.1	ENSG00000238026	41041	LINC01208	ENSG00000223715	249043	None	None
L1FLnI_3q26.32d	L1	L1	L1FLnI	chr3	176447657	176457798	-	coding	LINC01208	lncRNA	SENSE	ENSG00000223715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.32e	L1	L1	L1FLnI	chr3	176479365	176489500	-	noncoding	LINC01208	lncRNA	SENSE	ENSG00000223715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.32f	L1	L1	L1FLnI	chr3	176479371	176489500	-	noncoding	LINC01208	lncRNA	SENSE	ENSG00000223715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.32g	L1	L1	L1FLnI	chr3	176532720	176543056	+	noncoding	LINC01208	lncRNA	ANTISENSE	ENSG00000223715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.32h	L1	L1	L1FLnI	chr3	176671979	176681482	+	noncoding	LINC01208	lncRNA	ANTISENSE	ENSG00000223715	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.32i	L1	L1	L1FLnI	chr3	176702033	176712210	+	coding	LINC01208	lncRNA	ANTISENSE	ENSG00000223715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.32j	L1	L1	L1FLnI	chr3	176797484	176806227	+	noncoding	LINC01208	lncRNA	ANTISENSE	ENSG00000223715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.32k	L1	L1	L1FLnI	chr3	176823832	176833578	+	coding	LINC01208	lncRNA	ANTISENSE	ENSG00000223715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.32l	L1	L1	L1FLnI	chr3	176857816	176867923	+	coding	LINC01208	lncRNA	ANTISENSE	ENSG00000223715	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.32m	L1	L1	L1FLnI	chr3	176873537	176882787	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01208	ENSG00000223715	5699	MTND5P15	ENSG00000231888	127932	None	None
L1ORF2_3q26.32a	L1	L1	L1ORF2	chr3	177387758	177395801	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00578	ENSG00000228221	46109	AC117465.1	ENSG00000226782	38592	None	None
L1FLnI_3q26.32n	L1	L1	L1FLnI	chr3	177658868	177668819	-	noncoding	LINC00578	lncRNA	ANTISENSE	ENSG00000228221	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.32o	L1	L1	L1FLnI	chr3	177861930	177872303	+	noncoding	LINC02015	lncRNA	SENSE	ENSG00000231574	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.32p	L1	L1	L1FLnI	chr3	177905109	177914571	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02015	ENSG00000231574	5885	AC007953.1	ENSG00000225790	16187	chr3:177905205-177905475,chr3:177906165-177906372	chr3:177905722-177905727
L1FLnI_3q26.32q	L1	L1	L1FLnI	chr3	178086501	178096647	+	noncoding	AC110992.1	lncRNA	ANTISENSE	ENSG00000286003	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.32r	L1	L1	L1FLnI	chr3	178357318	178367019	+	noncoding	AC117453.1,KCNMB2	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000223930,ENSG00000197584	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.32s	L1	L1	L1FLnI	chr3	178572546	178583023	+	coding	KCNMB2,AC117457.1,KCNMB2-AS1	protein_coding,protein_coding,lncRNA	SENSE,SENSE,ANTISENSE	ENSG00000197584,ENSG00000275163,ENSG00000237978	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_3q26.32b	L1	L1	L1ORF2	chr3	178858948	178866993	+	coding	KCNMB2-AS1	lncRNA	ANTISENSE	ENSG00000237978	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.32t	L1	L1	L1FLnI	chr3	178936361	178945949	-	coding	KCNMB2-AS1	lncRNA	SENSE	ENSG00000237978	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.32u	L1	L1	L1FLnI	chr3	179000430	179012024	+	noncoding	ZMAT3	protein_coding	ANTISENSE	ENSG00000172667	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.32v	L1	L1	L1FLnI	chr3	179035096	179044862	+	noncoding	ZMAT3	protein_coding	ANTISENSE	ENSG00000172667	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:179035009-179035491,chr3:179037273-179037810	None
L1FLnI_3q26.32w	L1	L1	L1FLnI	chr3	179126224	179136366	-	coding	AC076966.2	lncRNA	SENSE	ENSG00000229102	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.33a	L1	L1	L1FLnI	chr3	180161479	180170319	-	noncoding	RNA5SP149	rRNA_pseudogene	SENSE	ENSG00000201822	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.33b	L1	L1	L1FLnI	chr3	180363855	180374022	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC068760.1	ENSG00000239880	38796	LINC02053	ENSG00000241696	38986	None	chr3:180365986-180365990
L1FLnI_3q26.33c	L1	L1	L1FLnI	chr3	180363855	180372604	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC068760.1	ENSG00000239880	38796	LINC02053	ENSG00000241696	40404	None	chr3:180365986-180365990
L1FLnI_3q26.33d	L1	L1	L1FLnI	chr3	180512454	180523140	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02053	ENSG00000241696	35676	AC125618.1	ENSG00000201810	19561	None	None
L1FLnI_3q26.33e	L1	L1	L1FLnI	chr3	180512454	180521346	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02053	ENSG00000241696	35676	AC125618.1	ENSG00000201810	21355	None	None
L1FLnI_3q26.33f	L1	L1	L1FLnI	chr3	180621193	180630410	-	noncoding	CCDC39,CCDC39	protein_coding,lncRNA	SENSE,SENSE	ENSG00000284862,ENSG00000145075	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.33g	L1	L1	L1FLnI	chr3	181040915	181050404	-	noncoding	SOX2-OT	lncRNA	ANTISENSE	ENSG00000242808	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.33h	L1	L1	L1FLnI	chr3	181068852	181079292	-	noncoding	SOX2-OT	lncRNA	ANTISENSE	ENSG00000242808	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.33i	L1	L1	L1FLnI	chr3	181223440	181234404	-	noncoding	SOX2-OT,RNU6-4P	lncRNA,snRNA	ANTISENSE,ANTISENSE	ENSG00000242808,ENSG00000206932	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.33j	L1	L1	L1FLnI	chr3	181318758	181328932	-	noncoding	SOX2-OT	lncRNA	ANTISENSE	ENSG00000242808	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.33k	L1	L1	L1FLnI	chr3	181584924	181595052	-	coding	SOX2-OT,AC125613.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000242808,ENSG00000239381	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q26.33l	L1	L1	L1FLnI	chr3	182149916	182160670	-	noncoding	AC109131.1	lncRNA	SENSE	ENSG00000287605	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:182160172-182160177
L1FLnI_3q26.33m	L1	L1	L1FLnI	chr3	182149923	182160670	-	noncoding	AC109131.1	lncRNA	SENSE	ENSG00000287605	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:182160172-182160177
L1FLnI_3q26.33n	L1	L1	L1FLnI	chr3	182422594	182432610	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC084211.1	ENSG00000242012	54338	LINC01994	ENSG00000241098	14360	None	None
L1FLnI_3q27.3a	L1	L1	L1FLnI	chr3	186903042	186913507	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007690.1	ENSG00000233565	8779	RPS20P14	ENSG00000223803	2485	None	None
L1FLnI_3q27.3b	L1	L1	L1FLnI	chr3	187051801	187061923	-	coding	ST6GAL1	protein_coding	ANTISENSE	ENSG00000073849	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q27.3c	L1	L1	L1FLnI	chr3	187146285	187156789	+	noncoding	RPL39L	protein_coding	ANTISENSE	ENSG00000163923	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_3q27.3a	L1	L1	L1ORF2	chr3	187411122	187419167	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC068299.2	ENSG00000280270	26273	AC068299.1	ENSG00000239093	4148	None	None
L1ORF2_3q27.3b	L1	L1	L1ORF2	chr3	187423396	187431443	-	coding	AC068299.1	snoRNA	ANTISENSE	ENSG00000239093	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q27.3d	L1	L1	L1FLnI	chr3	187604786	187613364	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SST	ENSG00000157005	55548	LINC02041	ENSG00000228952	155336	None	None
L1FLnI_3q27.3e	L1	L1	L1FLnI	chr3	187858982	187869016	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108681.1	ENSG00000224049	53724	AC068295.1	ENSG00000236864	63748	None	None
L1FLnI_3q27.3f	L1	L1	L1FLnI	chr3	187886722	187896714	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108681.1	ENSG00000224049	81464	AC068295.1	ENSG00000236864	36050	chr3:187889611-187889800	None
L1FLnI_3q28a	L1	L1	L1FLnI	chr3	188372211	188382361	-	coding	LPP	protein_coding	ANTISENSE	ENSG00000145012	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q28b	L1	L1	L1FLnI	chr3	188422459	188431088	-	noncoding	LPP	protein_coding	ANTISENSE	ENSG00000145012	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q28c	L1	L1	L1FLnI	chr3	188422464	188431088	-	noncoding	LPP	protein_coding	ANTISENSE	ENSG00000145012	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q28d	L1	L1	L1FLnI	chr3	189016731	189029037	-	coding	TPRG1	protein_coding	ANTISENSE	ENSG00000188001	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q28e	L1	L1	L1FLnI	chr3	189252551	189262952	-	coding	TPRG1	protein_coding	ANTISENSE	ENSG00000188001	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q28f	L1	L1	L1FLnI	chr3	189428202	189438230	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TPRG1	ENSG00000188001	102898	TP63	ENSG00000073282	193159	None	chr3:189433619-189433626
L1FLnI_3q28g	L1	L1	L1FLnI	chr3	190217709	190227402	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CLDN1	ENSG00000163347	78305	NMNAT1P3	ENSG00000238077	50058	None	None
L1FLnI_3q28h	L1	L1	L1FLnI	chr3	191010043	191020061	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OSTN	ENSG00000188729	179180	GMNC	ENSG00000205835	117614	None	None
L1FLnI_3q28i	L1	L1	L1FLnI	chr3	191054288	191063526	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GMNC	ENSG00000205835	161859	OSTN	ENSG00000188729	135715	None	None
L1FLnI_3q28j	L1	L1	L1FLnI	chr3	191072507	191083586	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GMNC	ENSG00000205835	180078	OSTN	ENSG00000188729	115655	None	None
L1FLnI_3q28k	L1	L1	L1FLnI	chr3	191072507	191081086	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GMNC	ENSG00000205835	180078	OSTN	ENSG00000188729	118155	None	None
L1FLnI_3q28l	L1	L1	L1FLnI	chr3	191699101	191708310	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC072023.1	ENSG00000201860	57864	AC026320.2	ENSG00000237653	244039	None	None
L1FLnI_3q28m	L1	L1	L1FLnI	chr3	191804389	191813260	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC072023.1	ENSG00000201860	163152	AC026320.2	ENSG00000237653	139089	None	None
L1FLnI_3q28n	L1	L1	L1FLnI	chr3	191830677	191841150	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC072023.1	ENSG00000201860	189440	AC026320.2	ENSG00000237653	111199	None	None
L1FLnI_3q28o	L1	L1	L1FLnI	chr3	191830677	191841163	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC072023.1	ENSG00000201860	189440	AC026320.2	ENSG00000237653	111186	None	None
L1FLnI_3q28p	L1	L1	L1FLnI	chr3	192089862	192099043	+	noncoding	AC026320.3,RN7SKP222	lncRNA,misc_RNA	ANTISENSE,SENSE	ENSG00000287178,ENSG00000222583	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q28q	L1	L1	L1FLnI	chr3	192148817	192158828	-	coding	FGF12	protein_coding	SENSE	ENSG00000114279	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr3:192155336-192155588	None
L1FLnI_3q29a	L1	L1	L1FLnI	chr3	192738715	192748742	-	coding	FGF12	protein_coding	SENSE	ENSG00000114279	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q29b	L1	L1	L1FLnI	chr3	192965341	192974219	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092966.1	ENSG00000232130	170245	MB21D2	ENSG00000180611	47485	None	None
L1FLnI_3q29c	L1	L1	L1FLnI	chr3	193002367	193010932	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092966.1	ENSG00000232130	133532	MB21D2	ENSG00000180611	84511	None	None
L1FLnI_3q29d	L1	L1	L1FLnI	chr3	193175889	193185525	+	noncoding	AC092966.1	lncRNA	ANTISENSE	ENSG00000232130	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:193176857-193176864,chr3:193176875-193176888
L1FLnI_3q29e	L1	L1	L1FLnI	chr3	193414849	193426516	+	noncoding	ATP13A4	protein_coding	ANTISENSE	ENSG00000127249	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q29f	L1	L1	L1FLnI	chr3	194894570	194905407	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	XXYLT1	ENSG00000173950	162877	AC090505.2	ENSG00000238031	61978	None	None
L1FLnI_3q29g	L1	L1	L1FLnI	chr3	195084174	195094193	+	coding	XXYLT1	protein_coding	ANTISENSE	ENSG00000173950	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:195087646-195087667
L1FLnI_3q29h	L1	L1	L1FLnI	chr3	195084174	195094217	+	coding	XXYLT1	protein_coding	ANTISENSE	ENSG00000173950	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr3:195087646-195087667
L1FLnI_3q29i	L1	L1	L1FLnI	chr3	195228753	195237410	-	noncoding	XXYLT1	protein_coding	SENSE	ENSG00000173950	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q29j	L1	L1	L1FLnI	chr3	195228753	195237411	-	noncoding	XXYLT1	protein_coding	SENSE	ENSG00000173950	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_3q29k	L1	L1	L1FLnI	chr3	197406430	197416557	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL121981.1	ENSG00000286870	65724	AC128709.2	ENSG00000235126	28504	None	None
L1FLnI_4p16.3a	L1	L1	L1FLnI	chr4	165350	175489	-	coding	ZNF718	protein_coding	ANTISENSE	ENSG00000250312	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p16.3b	L1	L1	L1FLnI	chr4	3160422	3170573	-	coding	HTT	protein_coding	ANTISENSE	ENSG00000197386	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p16.3c	L1	L1	L1FLnI	chr4	4013000	4023203	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC116562.4	ENSG00000284727	25008	ENPP7P9	ENSG00000250476	45340	None	None
L1ORF2_4p16.2	L1	L1	L1ORF2	chr4	4952884	4960923	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CYTL1	ENSG00000170891	53663	RN7SKP113	ENSG00000200761	31820	None	None
L1FLnI_4p16.2a	L1	L1	L1FLnI	chr4	4996019	5005658	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYTL1	ENSG00000170891	8928	RN7SKP113	ENSG00000200761	74955	None	None
L1FLnI_4p16.2b	L1	L1	L1FLnI	chr4	5169810	5179935	-	coding	STK32B	protein_coding	ANTISENSE	ENSG00000152953	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p16.2c	L1	L1	L1FLnI	chr4	5241051	5251220	-	coding	STK32B	protein_coding	ANTISENSE	ENSG00000152953	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p16.2d	L1	L1	L1FLnI	chr4	5241076	5251220	-	coding	STK32B	protein_coding	ANTISENSE	ENSG00000152953	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p16.2e	L1	L1	L1FLnI	chr4	5292273	5302755	-	noncoding	STK32B	protein_coding	ANTISENSE	ENSG00000152953	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p16.2f	L1	L1	L1FLnI	chr4	5302119	5311714	-	coding	STK32B	protein_coding	ANTISENSE	ENSG00000152953	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p16.2g	L1	L1	L1FLnI	chr4	5344478	5354780	+	noncoding	STK32B	protein_coding	SENSE	ENSG00000152953	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p16.2h	L1	L1	L1FLnI	chr4	5438103	5448128	-	coding	STK32B	protein_coding	ANTISENSE	ENSG00000152953	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p16.2i	L1	L1	L1FLnI	chr4	5480088	5490204	-	coding	STK32B	protein_coding	ANTISENSE	ENSG00000152953	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p16.2j	L1	L1	L1FLnI	chr4	5490079	5500198	-	coding	STK32B	protein_coding	ANTISENSE	ENSG00000152953	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p16.2k	L1	L1	L1FLnI	chr4	5514682	5524474	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	STK32B	ENSG00000152953	13688	LINC01587	ENSG00000082929	95	None	None
L1FLnI_4p16.2l	L1	L1	L1FLnI	chr4	5590081	5600233	+	coding	EVC2	protein_coding	ANTISENSE	ENSG00000173040	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p16.2m	L1	L1	L1FLnI	chr4	5761416	5771428	-	coding	EVC,CRMP1	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000072840,ENSG00000072832	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p16.1a	L1	L1	L1FLnI	chr4	7403500	7413411	-	noncoding	SORCS2	protein_coding	ANTISENSE	ENSG00000184985	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:7410973-7410977
L1FLnI_4p16.1b	L1	L1	L1FLnI	chr4	7403598	7413411	-	noncoding	SORCS2	protein_coding	ANTISENSE	ENSG00000184985	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:7410973-7410977
L1FLnI_4p16.1c	L1	L1	L1FLnI	chr4	9077080	9087179	+	noncoding	AC108519.1,AC073648.7,ENPP7P10	lncRNA,lncRNA,unprocessed_pseudogene	ANTISENSE,SENSE,SENSE	ENSG00000288075,ENSG00000287972,ENSG00000249767	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p16.1d	L1	L1	L1FLnI	chr4	10422920	10432033	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF518B	ENSG00000178163	7847	AC110768.2	ENSG00000250613	11276	chr4:10429107-10429280	None
L1FLnI_4p16.1e	L1	L1	L1FLnI	chr4	10774895	10784920	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR572	ENSG00000207716	583907	LINC02498	ENSG00000283083	25309	None	None
L1FLnI_4p16.1f	L1	L1	L1FLnI	chr4	10823928	10832822	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR572	ENSG00000207716	536005	LINC02498	ENSG00000283083	74342	chr4:10829331-10829530	None
L1FLnI_4p16.1g	L1	L1	L1FLnI	chr4	10847622	10858405	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR572	ENSG00000207716	510422	LINC02498	ENSG00000283083	98036	None	None
L1FLnI_4p16.1h	L1	L1	L1FLnI	chr4	10847645	10858405	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR572	ENSG00000207716	510422	LINC02498	ENSG00000283083	98059	None	None
L1FLnI_4p16.1i	L1	L1	L1FLnI	chr4	11042469	11051281	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR572	ENSG00000207716	317546	LINC02498	ENSG00000283083	292883	None	None
L1FLnI_4p16.1j	L1	L1	L1FLnI	chr4	11060417	11070438	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR572	ENSG00000207716	298389	LINC02498	ENSG00000283083	310831	None	None
L1FLnI_4p16.1k	L1	L1	L1FLnI	chr4	11143119	11153141	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR572	ENSG00000207716	215686	LINC02498	ENSG00000283083	393533	None	None
L1FLnI_4p16.1l	L1	L1	L1FLnI	chr4	11231719	11241754	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02498	ENSG00000283083	482133	MIR572	ENSG00000207716	127073	None	None
L1FLnI_4p15.33a	L1	L1	L1FLnI	chr4	11378242	11388270	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HS3ST1	ENSG00000002587	4880	RNPS1P1	ENSG00000250896	5350	None	None
L1FLnI_4p15.33b	L1	L1	L1FLnI	chr4	11553949	11564086	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC025539.1	ENSG00000251152	75753	AC005699.1	ENSG00000249631	61628	None	None
L1FLnI_4p15.33c	L1	L1	L1FLnI	chr4	11577860	11587017	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005699.1	ENSG00000249631	38697	AC025539.1	ENSG00000251152	99664	None	None
L1FLnI_4p15.33d	L1	L1	L1FLnI	chr4	11789262	11799252	+	coding	AC005699.1	lncRNA	SENSE	ENSG00000249631	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.33e	L1	L1	L1FLnI	chr4	11883646	11892816	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005699.1	ENSG00000249631	59740	AC108037.1	ENSG00000248262	21851	None	None
L1FLnI_4p15.33f	L1	L1	L1FLnI	chr4	11883646	11892481	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005699.1	ENSG00000249631	59740	AC108037.1	ENSG00000248262	22186	None	None
L1FLnI_4p15.33g	L1	L1	L1FLnI	chr4	12086483	12096625	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108037.1	ENSG00000248262	166795	LINC02270	ENSG00000251210	126820	None	None
L1FLnI_4p15.33h	L1	L1	L1FLnI	chr4	12126612	12135523	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108037.1	ENSG00000248262	206924	LINC02270	ENSG00000251210	87922	None	None
L1FLnI_4p15.33i	L1	L1	L1FLnI	chr4	12154673	12163593	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02270	ENSG00000251210	59852	AC108037.1	ENSG00000248262	234985	None	None
L1FLnI_4p15.33j	L1	L1	L1FLnI	chr4	12331061	12341107	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-578P	ENSG00000212282	18371	ECM1P2	ENSG00000249995	297979	None	None
L1FLnI_4p15.33k	L1	L1	L1FLnI	chr4	12457850	12467972	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-578P	ENSG00000212282	145160	ECM1P2	ENSG00000249995	171114	None	chr4:12459428-12459429
L1FLnI_4p15.33l	L1	L1	L1FLnI	chr4	12480339	12491236	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ECM1P2	ENSG00000249995	147850	RNU6-578P	ENSG00000212282	167649	None	None
L1FLnI_4p15.33m	L1	L1	L1FLnI	chr4	12521421	12529928	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-578P	ENSG00000212282	208731	ECM1P2	ENSG00000249995	109158	None	None
L1FLnI_4p15.33n	L1	L1	L1FLnI	chr4	12744774	12754795	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ECM1P2	ENSG00000249995	103765	AC007370.2	ENSG00000250371	104306	None	None
L1FLnI_4p15.33o	L1	L1	L1FLnI	chr4	12899933	12909956	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC007370.2	ENSG00000250371	34972	AC007370.1	ENSG00000250098	37618	None	None
L1FLnI_4p15.33p	L1	L1	L1FLnI	chr4	13413266	13423417	+	coding	RAB28	protein_coding	ANTISENSE	ENSG00000157869	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.33q	L1	L1	L1FLnI	chr4	13739309	13749328	-	noncoding	LINC01182	lncRNA	ANTISENSE	ENSG00000250634	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_4p15.33	L1	L1	L1ORF2	chr4	14008442	14016488	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01085	ENSG00000248698	95480	LINC01182	ENSG00000250634	4686	None	None
L1FLnI_4p15.33r	L1	L1	L1FLnI	chr4	14206601	14216744	-	coding	AC092546.1	lncRNA	ANTISENSE	ENSG00000249988	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.33s	L1	L1	L1FLnI	chr4	14420054	14430160	-	coding	AC006296.3	lncRNA	ANTISENSE	ENSG00000287360	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.33t	L1	L1	L1FLnI	chr4	14477253	14487327	+	coding	LINC00504	lncRNA	ANTISENSE	ENSG00000248360	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.33u	L1	L1	L1FLnI	chr4	14535882	14545064	+	noncoding	LINC00504	lncRNA	ANTISENSE	ENSG00000248360	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.33v	L1	L1	L1FLnI	chr4	14659798	14669826	-	coding	LINC00504	lncRNA	SENSE	ENSG00000248360	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.33w	L1	L1	L1FLnI	chr4	14715166	14725360	+	noncoding	LINC00504	lncRNA	ANTISENSE	ENSG00000248360	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.33x	L1	L1	L1FLnI	chr4	14751616	14761644	+	coding	LINC00504	lncRNA	ANTISENSE	ENSG00000248360	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.33y	L1	L1	L1FLnI	chr4	14783627	14792730	+	noncoding	LINC00504	lncRNA	ANTISENSE	ENSG00000248360	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.32a	L1	L1	L1FLnI	chr4	15154194	15163113	-	coding	C1QTNF7-AS1	lncRNA	SENSE	ENSG00000249252	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:15162090-15162421	None
L1FLnI_4p15.32b	L1	L1	L1FLnI	chr4	15170506	15180515	+	coding	C1QTNF7-AS1	lncRNA	ANTISENSE	ENSG00000249252	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.32c	L1	L1	L1FLnI	chr4	15275168	15285165	+	coding	C1QTNF7-AS1	lncRNA	ANTISENSE	ENSG00000249252	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.32d	L1	L1	L1FLnI	chr4	15275168	15285152	+	coding	C1QTNF7-AS1	lncRNA	ANTISENSE	ENSG00000249252	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.32e	L1	L1	L1FLnI	chr4	15815843	15824795	+	noncoding	CD38	protein_coding	SENSE	ENSG00000004468	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr4:15819365-15819743	None
L1FLnI_4p15.32f	L1	L1	L1FLnI	chr4	15838048	15848072	+	coding	CD38	protein_coding	SENSE	ENSG00000004468	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.32g	L1	L1	L1FLnI	chr4	16366801	16376341	-	coding	ZEB2P1	transcribed_processed_pseudogene	SENSE	ENSG00000249506	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.32h	L1	L1	L1FLnI	chr4	16366802	16376341	-	coding	ZEB2P1	transcribed_processed_pseudogene	SENSE	ENSG00000249506	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.32i	L1	L1	L1FLnI	chr4	16401881	16412040	-	coding	AC097515.1	lncRNA	ANTISENSE	ENSG00000248138	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.32j	L1	L1	L1FLnI	chr4	16553587	16563724	+	coding	LDB2	protein_coding	ANTISENSE	ENSG00000169744	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:16553629-16554069	None
L1FLnI_4p15.32k	L1	L1	L1FLnI	chr4	16605447	16615288	+	noncoding	LDB2	protein_coding	ANTISENSE	ENSG00000169744	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:16608203-16608207,chr4:16608299-16608302
L1ORF2_4p15.32	L1	L1	L1ORF2	chr4	16941774	16950128	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LDB2	ENSG00000169744	43096	AC106894.1	ENSG00000249998	23147	None	chr4:16942627-16942645
L1FLnI_4p15.32l	L1	L1	L1FLnI	chr4	17157347	17167933	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02493	ENSG00000250819	3824	AC106894.1	ENSG00000249998	83444	None	None
L1FLnI_4p15.31a	L1	L1	L1FLnI	chr4	17981245	17990279	-	noncoding	LCORL	protein_coding	SENSE	ENSG00000178177	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.31b	L1	L1	L1FLnI	chr4	17981647	17990279	-	noncoding	LCORL	protein_coding	SENSE	ENSG00000178177	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.31c	L1	L1	L1FLnI	chr4	18086746	18097296	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LCORL	ENSG00000178177	64870	AC093898.1	ENSG00000286046	321366	None	None
L1FLnI_4p15.31d	L1	L1	L1FLnI	chr4	18207182	18217351	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093898.1	ENSG00000286046	201311	LCORL	ENSG00000178177	185306	None	None
L1FLnI_4p15.31e	L1	L1	L1FLnI	chr4	18218815	18229007	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093898.1	ENSG00000286046	189655	LCORL	ENSG00000178177	196939	None	None
L1FLnI_4p15.31f	L1	L1	L1FLnI	chr4	18254031	18264548	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093898.1	ENSG00000286046	154114	LCORL	ENSG00000178177	232155	None	None
L1FLnI_4p15.31g	L1	L1	L1FLnI	chr4	18255819	18264548	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093898.1	ENSG00000286046	154114	LCORL	ENSG00000178177	233943	None	None
L1FLnI_4p15.31h	L1	L1	L1FLnI	chr4	18336794	18347105	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093898.1	ENSG00000286046	71557	LCORL	ENSG00000178177	314918	None	None
L1FLnI_4p15.31i	L1	L1	L1FLnI	chr4	18488259	18497064	+	noncoding	AC093898.1,AC093871.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000286046,ENSG00000251048	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.31j	L1	L1	L1FLnI	chr4	18488259	18497054	+	noncoding	AC093898.1,AC093871.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000286046,ENSG00000251048	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.31k	L1	L1	L1FLnI	chr4	18555614	18566021	+	noncoding	AC093898.1	lncRNA	SENSE	ENSG00000286046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:18558088-18558421	None
L1FLnI_4p15.31l	L1	L1	L1FLnI	chr4	18596630	18606773	-	coding	AC093898.1	lncRNA	ANTISENSE	ENSG00000286046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.31m	L1	L1	L1FLnI	chr4	18920460	18928959	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093898.1	ENSG00000286046	31798	AC006840.1	ENSG00000279918	169240	None	None
L1FLnI_4p15.31n	L1	L1	L1FLnI	chr4	19077400	19087429	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC006840.1	ENSG00000279918	10770	AC093898.1	ENSG00000286046	188738	None	None
L1FLnI_4p15.31o	L1	L1	L1FLnI	chr4	19288824	19297554	-	noncoding	LINC02438	lncRNA	SENSE	ENSG00000248238	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.31p	L1	L1	L1FLnI	chr4	19862304	19872468	-	coding	AC024230.1	lncRNA	ANTISENSE	ENSG00000248515	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.31q	L1	L1	L1FLnI	chr4	20715850	20725973	-	coding	PACRGL	protein_coding	ANTISENSE	ENSG00000163138	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.31r	L1	L1	L1FLnI	chr4	20735127	20745278	+	coding	PACRGL,KCNIP4	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000163138,ENSG00000185774	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.31s	L1	L1	L1FLnI	chr4	21071149	21079784	-	coding	KCNIP4	protein_coding	SENSE	ENSG00000185774	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.31t	L1	L1	L1FLnI	chr4	21103088	21113254	-	coding	KCNIP4	protein_coding	SENSE	ENSG00000185774	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_4p15.31	L1	L1	L1FLI	chr4	21158390	21166435	+	coding	KCNIP4	protein_coding	ANTISENSE	ENSG00000185774	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.2a	L1	L1	L1FLnI	chr4	21322637	21332501	-	coding	KCNIP4,AC110296.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000185774,ENSG00000250243	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:21326608-21327007	chr4:21325136-21325142,chr4:21325731-21325745
L1FLnI_4p15.2b	L1	L1	L1FLnI	chr4	21322677	21332501	-	coding	KCNIP4,AC110296.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000185774,ENSG00000250243	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:21326608-21327007	chr4:21325136-21325142,chr4:21325731-21325745
L1FLnI_4p15.2c	L1	L1	L1FLnI	chr4	21348654	21358831	+	coding	KCNIP4,AC110296.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000185774,ENSG00000250243	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.2d	L1	L1	L1FLnI	chr4	21769490	21779896	-	noncoding	KCNIP4	protein_coding	SENSE	ENSG00000185774	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:21772765-21772770,chr4:21774131-21774150
L1FLnI_4p15.2e	L1	L1	L1FLnI	chr4	21993151	22003274	+	noncoding	AC096719.1	lncRNA	SENSE	ENSG00000250039	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.2f	L1	L1	L1FLnI	chr4	22142929	22152957	+	coding	AC096719.1	lncRNA	SENSE	ENSG00000250039	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.2g	L1	L1	L1FLnI	chr4	22264610	22275532	+	noncoding	AC096719.1	lncRNA	SENSE	ENSG00000250039	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:22268557-22268900	chr4:22268663-22268704
L1FLnI_4p15.2h	L1	L1	L1FLnI	chr4	22264610	22273592	+	noncoding	AC096719.1	lncRNA	SENSE	ENSG00000250039	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:22268557-22268900	chr4:22268663-22268704
L1FLnI_4p15.2i	L1	L1	L1FLnI	chr4	22885653	22895798	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC097512.1	ENSG00000248837	93349	GBA3	ENSG00000249948	66078	None	None
L1FLnI_4p15.2j	L1	L1	L1FLnI	chr4	22970972	22979930	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097512.1	ENSG00000248837	9217	GBA3	ENSG00000249948	151397	None	None
L1FLnI_4p15.2k	L1	L1	L1FLnI	chr4	22974080	22984575	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GBA3	ENSG00000249948	154505	AC097512.1	ENSG00000248837	4572	None	None
L1FLnI_4p15.2l	L1	L1	L1FLnI	chr4	23403421	23412405	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RFPL4AP3	ENSG00000251220	102535	AC092440.1	ENSG00000249547	117848	None	None
L1FLnI_4p15.2m	L1	L1	L1FLnI	chr4	23519883	23531034	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RFPL4AP3	ENSG00000251220	4599	AC093607.1	ENSG00000250137	29889	None	None
L1FLnI_4p15.2n	L1	L1	L1FLnI	chr4	23611273	23621293	+	coding	AC093607.1	lncRNA	SENSE	ENSG00000250137	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.2o	L1	L1	L1FLnI	chr4	23611273	23621286	+	coding	AC093607.1	lncRNA	SENSE	ENSG00000250137	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.2p	L1	L1	L1FLnI	chr4	23617761	23626990	+	coding	AC093607.1	lncRNA	SENSE	ENSG00000250137	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.2q	L1	L1	L1FLnI	chr4	23641246	23651272	-	coding	AC093607.1	lncRNA	ANTISENSE	ENSG00000250137	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.2r	L1	L1	L1FLnI	chr4	24343256	24353731	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DHX15	ENSG00000109606	163710	PPARGC1A	ENSG00000109819	439167	None	chr4:24347971-24348013
L1FLnI_4p15.2s	L1	L1	L1FLnI	chr4	24345035	24353731	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DHX15	ENSG00000109606	163710	PPARGC1A	ENSG00000109819	440946	None	chr4:24347971-24348013
L1FLnI_4p15.2t	L1	L1	L1FLnI	chr4	24379234	24387943	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPARGC1A	ENSG00000109819	475145	DHX15	ENSG00000109606	129498	None	None
L1FLnI_4p15.2u	L1	L1	L1FLnI	chr4	24934914	24945061	+	coding	CCDC149	protein_coding	ANTISENSE	ENSG00000181982	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.2v	L1	L1	L1FLnI	chr4	25285344	25294683	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZCCHC4	ENSG00000168228	18091	PI4K2B	ENSG00000038210	6140	None	None
L1FLnI_4p15.2w	L1	L1	L1FLnI	chr4	26550059	26560484	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TBC1D19	ENSG00000109680	15953	CCKAR	ENSG00000163394	59575	None	chr4:26557881-26557913
L1FLnI_4p15.2x	L1	L1	L1FLnI	chr4	26636937	26646341	+	coding	TBC1D19	protein_coding	SENSE	ENSG00000109680	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.2y	L1	L1	L1FLnI	chr4	26690423	26700524	+	noncoding	TBC1D19	protein_coding	SENSE	ENSG00000109680	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.2z	L1	L1	L1FLnI	chr4	26969755	26979879	-	coding	STIM2	protein_coding	ANTISENSE	ENSG00000109689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.2aa	L1	L1	L1FLnI	chr4	26969756	26979879	-	coding	STIM2	protein_coding	ANTISENSE	ENSG00000109689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.2ba	L1	L1	L1FLnI	chr4	27069735	27079764	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC024132.3	ENSG00000251080	54232	STIM2	ENSG00000109689	44354	None	chr4:27077980-27077985
L1FLnI_4p15.2ca	L1	L1	L1FLnI	chr4	27375189	27385219	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	IGBP1P5	ENSG00000250858	199926	LINC02261	ENSG00000249699	92964	None	None
L1FLnI_4p15.2da	L1	L1	L1FLnI	chr4	27686516	27696638	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007106.2	ENSG00000287389	221115	IGBP1P5	ENSG00000250858	100372	None	None
L1FLnI_4p15.1a	L1	L1	L1FLnI	chr4	27995955	28005909	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093791.2	ENSG00000286321	220060	AC007106.1	ENSG00000251410	10892	None	None
L1FLnI_4p15.1b	L1	L1	L1FLnI	chr4	28163550	28172624	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093791.2	ENSG00000286321	53345	AC007106.1	ENSG00000251410	178487	None	None
L1FLnI_4p15.1c	L1	L1	L1FLnI	chr4	28851029	28861168	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02364	ENSG00000250190	135330	MESTP3	ENSG00000250927	26818	None	None
L1FLnI_4p15.1d	L1	L1	L1FLnI	chr4	29225804	29236277	+	noncoding	LINC02472	lncRNA	SENSE	ENSG00000248338	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.1e	L1	L1	L1FLnI	chr4	29670065	29679554	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093608.1	ENSG00000283666	159328	EEF1A1P21	ENSG00000249542	69203	None	None
L1FLnI_4p15.1f	L1	L1	L1FLnI	chr4	29825677	29834199	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EEF1A1P21	ENSG00000249542	75577	AC097510.1	ENSG00000249564	73460	None	None
L1FLnI_4p15.1g	L1	L1	L1FLnI	chr4	29925816	29936505	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097510.1	ENSG00000249564	18025	RPS3AP17	ENSG00000244031	26139	None	None
L1FLnI_4p15.1h	L1	L1	L1FLnI	chr4	30073507	30082011	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC098595.1	ENSG00000286596	636794	AC106868.1	ENSG00000248281	65191	None	None
L1FLnI_4p15.1i	L1	L1	L1FLnI	chr4	30323465	30332025	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC098595.1	ENSG00000286596	386780	AC106868.1	ENSG00000248281	315149	None	None
L1FLnI_4p15.1j	L1	L1	L1FLnI	chr4	31240820	31250344	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02497	ENSG00000251182	29142	AC104071.1	ENSG00000251434	99940	None	None
L1FLnI_4p15.1k	L1	L1	L1FLnI	chr4	31523964	31534942	-	noncoding	LINC02501	lncRNA	ANTISENSE	ENSG00000249882	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.1l	L1	L1	L1FLnI	chr4	32360063	32370080	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC116611.1	ENSG00000286784	213775	LINC02353	ENSG00000251329	6843	None	None
L1FLnI_4p15.1m	L1	L1	L1FLnI	chr4	32360077	32370080	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC116611.1	ENSG00000286784	213775	LINC02353	ENSG00000251329	6857	None	None
L1FLnI_4p15.1n	L1	L1	L1FLnI	chr4	32405583	32415610	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02353	ENSG00000251329	52363	AC116611.1	ENSG00000286784	168245	None	None
L1FLnI_4p15.1o	L1	L1	L1FLnI	chr4	32527351	32535866	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02353	ENSG00000251329	174131	AC116611.1	ENSG00000286784	47989	None	None
L1FLnI_4p15.1p	L1	L1	L1FLnI	chr4	32652269	32661615	-	coding	AC116611.1	lncRNA	SENSE	ENSG00000286784	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.1q	L1	L1	L1FLnI	chr4	32652682	32661615	-	coding	AC116611.1	lncRNA	SENSE	ENSG00000286784	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.1r	L1	L1	L1FLnI	chr4	33333917	33344692	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097535.2	ENSG00000249766	55846	AC093878.1	ENSG00000249452	95247	None	None
L1FLnI_4p15.1s	L1	L1	L1FLnI	chr4	34274727	34285862	-	noncoding	LINC02484	lncRNA	SENSE	ENSG00000248685	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.1t	L1	L1	L1FLnI	chr4	34276695	34285862	-	noncoding	LINC02484	lncRNA	SENSE	ENSG00000248685	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p15.1u	L1	L1	L1FLnI	chr4	34698276	34708041	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093689.1	ENSG00000250597	28844	AC093913.1	ENSG00000275250	6229	None	None
L1FLnI_4p15.1v	L1	L1	L1FLnI	chr4	34869562	34878949	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093913.1	ENSG00000275250	154964	AC020589.1	ENSG00000238694	87292	None	None
L1FLnI_4p15.1w	L1	L1	L1FLnI	chr4	35358927	35368770	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SEC63P2	ENSG00000250416	119042	AC020589.1	ENSG00000238694	392583	chr4:35365283-35365438	chr4:35359136-35359154
L1FLnI_4p15.1x	L1	L1	L1FLnI	chr4	35457126	35466209	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SEC63P2	ENSG00000250416	21603	AC020589.1	ENSG00000238694	490782	None	None
L1FLnI_4p15.1y	L1	L1	L1FLnI	chr4	35790259	35799265	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-573P	ENSG00000206665	294256	ARAP2	ENSG00000047365	148956	None	None
L1FLnI_4p14a	L1	L1	L1FLnI	chr4	36373545	36383134	+	noncoding	AC104078.2	lncRNA	ANTISENSE	ENSG00000251438	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p14b	L1	L1	L1FLnI	chr4	36433597	36443748	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02505	ENSG00000248215	52380	MIR1255B1	ENSG00000283207	7169	None	None
L1FLnI_4p14c	L1	L1	L1FLnI	chr4	36562620	36572969	-	noncoding	LINC02505	lncRNA	SENSE	ENSG00000248215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p14d	L1	L1	L1FLnI	chr4	36652531	36662473	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02505	ENSG00000248215	10592	AC093746.1	ENSG00000287416	239769	None	None
L1FLnI_4p14e	L1	L1	L1FLnI	chr4	36851320	36860081	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02505	ENSG00000248215	209381	AC093746.1	ENSG00000287416	42161	None	None
L1FLnI_4p14f	L1	L1	L1FLnI	chr4	36885111	36895183	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093746.1	ENSG00000287416	7059	LINC02505	ENSG00000248215	243172	None	None
L1FLnI_4p14g	L1	L1	L1FLnI	chr4	36931823	36942244	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093746.1	ENSG00000287416	18484	LINC02616	ENSG00000261761	59528	None	None
L1FLnI_4p14h	L1	L1	L1FLnI	chr4	37087782	37096296	-	noncoding	AL136537.1	lncRNA	ANTISENSE	ENSG00000247810	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p14i	L1	L1	L1FLnI	chr4	37348203	37358071	-	noncoding	NWD2	protein_coding	ANTISENSE	ENSG00000174145	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p14j	L1	L1	L1FLnI	chr4	37348205	37358071	-	noncoding	NWD2	protein_coding	ANTISENSE	ENSG00000174145	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p14k	L1	L1	L1FLnI	chr4	37404240	37414633	+	noncoding	NWD2	protein_coding	SENSE	ENSG00000174145	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p14l	L1	L1	L1FLnI	chr4	38431688	38442152	-	noncoding	LINC01258	lncRNA	SENSE	ENSG00000249534	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p14m	L1	L1	L1FLnI	chr4	38442289	38452426	-	coding	LINC01258	lncRNA	SENSE	ENSG00000249534	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p14n	L1	L1	L1FLnI	chr4	38472995	38483042	+	coding	LINC01258	lncRNA	ANTISENSE	ENSG00000249534	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p14o	L1	L1	L1FLnI	chr4	38843800	38853892	+	noncoding	TLR1,TLR6	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000174125,ENSG00000174130	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p14p	L1	L1	L1FLnI	chr4	39242877	39253020	+	coding	WDR19	protein_coding	SENSE	ENSG00000157796	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p13a	L1	L1	L1FLnI	chr4	41269923	41280054	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC095043.1	ENSG00000207481	23183	UCHL1	ENSG00000154277	1468	None	None
L1FLnI_4p13b	L1	L1	L1FLnI	chr4	41345962	41356118	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC095043.1	ENSG00000207481	42625	LIMCH1	ENSG00000064042	3489	None	None
L1FLnI_4p13c	L1	L1	L1FLnI	chr4	41345962	41356136	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC095043.1	ENSG00000207481	42625	LIMCH1	ENSG00000064042	3471	None	None
L1FLnI_4p13d	L1	L1	L1FLnI	chr4	41900084	41909065	-	coding	AC108210.1	lncRNA	SENSE	ENSG00000249771	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p13e	L1	L1	L1FLnI	chr4	42038259	42048739	+	noncoding	SLC30A9	protein_coding	SENSE	ENSG00000014824	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p13f	L1	L1	L1FLnI	chr4	42695802	42705936	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC096734.1	ENSG00000251517	171	AC096734.2	ENSG00000260519	37874	None	None
L1FLnI_4p13g	L1	L1	L1FLnI	chr4	42733619	42743129	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096734.1	ENSG00000251517	26284	RN7SKP82	ENSG00000252595	149267	None	None
L1FLnI_4p13h	L1	L1	L1FLnI	chr4	42763751	42772928	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096734.1	ENSG00000251517	56416	RN7SKP82	ENSG00000252595	119468	None	None
L1FLnI_4p13i	L1	L1	L1FLnI	chr4	42763751	42772516	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096734.1	ENSG00000251517	56416	RN7SKP82	ENSG00000252595	119880	None	None
L1FLnI_4p13j	L1	L1	L1FLnI	chr4	43089369	43099523	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GRXCR1	ENSG00000215203	58711	AC111198.1	ENSG00000248939	34344	None	None
L1FLnI_4p13k	L1	L1	L1FLnI	chr4	43472332	43480899	-	noncoding	LINC02383	lncRNA	SENSE	ENSG00000248143	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p13l	L1	L1	L1FLnI	chr4	43650852	43660991	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL691P	ENSG00000239464	52008	AC080132.1	ENSG00000286891	102143	None	None
L1FLnI_4p13m	L1	L1	L1FLnI	chr4	43891043	43901140	-	noncoding	AC080132.1,NDUFB4P12	lncRNA,processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000286891,ENSG00000124399	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p13n	L1	L1	L1FLnI	chr4	44036295	44047697	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114757.1	ENSG00000250863	10779	KCTD8	ENSG00000183783	126206	None	None
L1FLnI_4p13o	L1	L1	L1FLnI	chr4	44192966	44203302	+	noncoding	KCTD8	protein_coding	ANTISENSE	ENSG00000183783	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p13p	L1	L1	L1FLnI	chr4	44260962	44271054	+	noncoding	KCTD8	protein_coding	ANTISENSE	ENSG00000183783	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p13q	L1	L1	L1FLnI	chr4	44495913	44506030	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093852.1	ENSG00000251159	27585	KCTD8	ENSG00000183783	47104	None	None
L1FLnI_4p13r	L1	L1	L1FLnI	chr4	44589618	44599731	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093852.1	ENSG00000251159	55738	YIPF7	ENSG00000177752	22334	None	None
L1FLnI_4p12a	L1	L1	L1FLnI	chr4	44743491	44753632	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093755.1	ENSG00000249729	86748	GNPDA2	ENSG00000163281	16903	None	None
L1FLnI_4p12b	L1	L1	L1FLnI	chr4	44875962	44886097	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093755.1	ENSG00000249729	34560	PRDX4P1	ENSG00000248987	57918	None	None
L1FLnI_4p12c	L1	L1	L1FLnI	chr4	44957351	44966214	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108467.2	ENSG00000275959	28212	PRDX4P1	ENSG00000248987	12390	None	chr4:44961652-44961657
L1FLnI_4p12d	L1	L1	L1FLnI	chr4	45104751	45114749	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	THAP12P9	ENSG00000248320	208504	AC108467.1	ENSG00000248744	53099	None	None
L1FLnI_4p12e	L1	L1	L1FLnI	chr4	45288037	45296948	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	THAP12P9	ENSG00000248320	26305	AC108467.1	ENSG00000248744	236385	None	None
L1FLnI_4p12f	L1	L1	L1FLnI	chr4	45648210	45657833	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-931P	ENSG00000200720	168074	RN7SKP199	ENSG00000222257	337286	None	None
L1FLnI_4p12g	L1	L1	L1FLnI	chr4	45829479	45840006	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP199	ENSG00000222257	155113	RNU6-931P	ENSG00000200720	349343	None	None
L1FLnI_4p12h	L1	L1	L1FLnI	chr4	45851851	45860696	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP199	ENSG00000222257	134423	RNU6-931P	ENSG00000200720	371715	None	None
L1FLnI_4p12i	L1	L1	L1FLnI	chr4	45996818	46007215	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GABRG1	ENSG00000163285	28554	RN7SKP199	ENSG00000222257	1395	None	None
L1FLnI_4p12j	L1	L1	L1FLnI	chr4	46401187	46411310	+	noncoding	GABRA2,AC095060.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000151834,ENSG00000249330	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p12k	L1	L1	L1FLnI	chr4	46563630	46573770	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-412P	ENSG00000252243	32288	RAC1P2	ENSG00000249936	150060	None	None
L1FLnI_4p12l	L1	L1	L1FLnI	chr4	46630383	46639500	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAC1P2	ENSG00000249936	84330	RNU6-412P	ENSG00000252243	99041	None	None
L1FLnI_4p12m	L1	L1	L1FLnI	chr4	46630385	46639500	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAC1P2	ENSG00000249936	84330	RNU6-412P	ENSG00000252243	99043	None	None
L1FLnI_4p12n	L1	L1	L1FLnI	chr4	46806244	46816659	-	noncoding	COX7B2	protein_coding	SENSE	ENSG00000170516	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p12o	L1	L1	L1FLnI	chr4	47245890	47255970	-	noncoding	GABRB1	protein_coding	ANTISENSE	ENSG00000163288	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p12p	L1	L1	L1FLnI	chr4	47290618	47300750	+	coding	GABRB1	protein_coding	SENSE	ENSG00000163288	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p12q	L1	L1	L1FLnI	chr4	47916549	47926611	-	coding	NIPAL1	protein_coding	ANTISENSE	ENSG00000163293	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p12r	L1	L1	L1FLnI	chr4	47990334	47999530	-	noncoding	NIPAL1,CNGA1	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000163293,ENSG00000198515	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p12s	L1	L1	L1FLnI	chr4	48051456	48061474	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TXK	ENSG00000074966	4919	NIPAL1	ENSG00000163293	11283	chr4:48058736-48058880	None
L1FLnI_4p11a	L1	L1	L1FLnI	chr4	48276114	48285855	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TEC	ENSG00000135605	6276	SLAIN2	ENSG00000109171	55674	None	None
L1FLnI_4p11b	L1	L1	L1FLnI	chr4	48707576	48717784	+	coding	FRYL	protein_coding	ANTISENSE	ENSG00000075539	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p11c	L1	L1	L1FLnI	chr4	48813498	48824072	+	noncoding	OCIAD1	protein_coding	SENSE	ENSG00000109180	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p11d	L1	L1	L1FLnI	chr4	48864082	48874232	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OCIAD2	ENSG00000145247	10787	OCIAD1	ENSG00000109180	2265	None	None
L1FLnI_4p11e	L1	L1	L1FLnI	chr4	48917372	48927351	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-158P	ENSG00000252913	5404	OCIAD2	ENSG00000145247	10435	None	None
L1FLnI_4p11f	L1	L1	L1FLnI	chr4	49006978	49017121	-	coding	CWH43,TPI1P4	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000109182,ENSG00000225455	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4p11g	L1	L1	L1FLnI	chr4	49169319	49179464	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC118282.3	ENSG00000249828	23707	CWH43	ENSG00000109182	107238	None	None
L1FLnI_4p11h	L1	L1	L1FLnI	chr4	49169335	49179464	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC118282.3	ENSG00000249828	23707	CWH43	ENSG00000109182	107254	None	None
L1FLnI_4p11i	L1	L1	L1FLnI	chr4	49617419	49627117	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SNX18P25	ENSG00000249337	27890	DCUN1D4	ENSG00000109184	2215883	None	chr4:49621764-49621765
L1FLnI_4q12a	L1	L1	L1FLnI	chr4	51824403	51833165	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DCUN1D4	ENSG00000109184	9835	SNX18P25	ENSG00000249337	2234874	None	None
L1FLnI_4q12b	L1	L1	L1FLnI	chr4	51934576	51944589	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104784.1	ENSG00000243929	33490	AC027271.1	ENSG00000272576	15195	None	None
L1FLnI_4q12c	L1	L1	L1FLnI	chr4	51947011	51956866	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104784.1	ENSG00000243929	21213	AC027271.1	ENSG00000272576	27630	None	None
L1FLnI_4q12d	L1	L1	L1FLnI	chr4	51984582	51994020	-	coding	LRRC66	protein_coding	SENSE	ENSG00000188993	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12e	L1	L1	L1FLnI	chr4	52085766	52096163	-	noncoding	SPATA18	protein_coding	ANTISENSE	ENSG00000163071	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12f	L1	L1	L1FLnI	chr4	52147706	52158111	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SPATA18	ENSG00000163071	50407	AC097522.2	ENSG00000287999	94709	None	None
L1FLnI_4q12g	L1	L1	L1FLnI	chr4	52164693	52174837	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC097522.2	ENSG00000287999	77983	SPATA18	ENSG00000163071	67394	None	None
L1FLnI_4q12h	L1	L1	L1FLnI	chr4	52212656	52221684	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097522.2	ENSG00000287999	31136	SPATA18	ENSG00000163071	115357	None	None
L1FLnI_4q12i	L1	L1	L1FLnI	chr4	52217724	52227871	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097522.2	ENSG00000287999	24949	SPATA18	ENSG00000163071	120425	None	None
L1FLnI_4q12j	L1	L1	L1FLnI	chr4	52319290	52329313	-	coding	AC097522.2	lncRNA	SENSE	ENSG00000287999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12k	L1	L1	L1FLnI	chr4	52325314	52334651	-	noncoding	AC097522.2	lncRNA	SENSE	ENSG00000287999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12l	L1	L1	L1FLnI	chr4	52373751	52384260	+	noncoding	AC097522.2	lncRNA	ANTISENSE	ENSG00000287999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:52376187-52376579	None
L1FLnI_4q12m	L1	L1	L1FLnI	chr4	52442850	52452982	+	noncoding	AC097522.2	lncRNA	ANTISENSE	ENSG00000287999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12n	L1	L1	L1FLnI	chr4	52455478	52464598	+	coding	AC097522.2	lncRNA	ANTISENSE	ENSG00000287999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12o	L1	L1	L1FLnI	chr4	52498903	52508385	-	coding	AC097522.2	lncRNA	SENSE	ENSG00000287999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12p	L1	L1	L1FLnI	chr4	52534973	52544998	+	coding	AC097522.2	lncRNA	ANTISENSE	ENSG00000287999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12q	L1	L1	L1FLnI	chr4	52767675	52777791	-	noncoding	LINC01618	lncRNA	ANTISENSE	ENSG00000250302	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12r	L1	L1	L1FLnI	chr4	52798152	52808684	+	noncoding	LINC01618	lncRNA	SENSE	ENSG00000250302	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12s	L1	L1	L1FLnI	chr4	52812958	52822986	+	coding	LINC01618	lncRNA	SENSE	ENSG00000250302	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12t	L1	L1	L1FLnI	chr4	52894678	52904791	-	coding	SCFD2	protein_coding	SENSE	ENSG00000184178	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12u	L1	L1	L1FLnI	chr4	52966533	52976682	+	coding	SCFD2	protein_coding	ANTISENSE	ENSG00000184178	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12v	L1	L1	L1FLnI	chr4	53027528	53036534	+	coding	SCFD2	protein_coding	ANTISENSE	ENSG00000184178	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12w	L1	L1	L1FLnI	chr4	53101388	53111848	+	noncoding	SCFD2	protein_coding	ANTISENSE	ENSG00000184178	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:53103762-53103769
L1FLnI_4q12x	L1	L1	L1FLnI	chr4	53101388	53110541	+	noncoding	SCFD2	protein_coding	ANTISENSE	ENSG00000184178	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:53103762-53103769
L1FLnI_4q12y	L1	L1	L1FLnI	chr4	53174028	53184162	+	coding	SCFD2	protein_coding	ANTISENSE	ENSG00000184178	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12z	L1	L1	L1FLnI	chr4	53213162	53223284	-	noncoding	SCFD2	protein_coding	SENSE	ENSG00000184178	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12aa	L1	L1	L1FLnI	chr4	53237380	53248077	+	noncoding	SCFD2	protein_coding	ANTISENSE	ENSG00000184178	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12ba	L1	L1	L1FLnI	chr4	53244411	53254402	+	coding	SCFD2	protein_coding	ANTISENSE	ENSG00000184178	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12ca	L1	L1	L1FLnI	chr4	53257677	53267747	-	noncoding	SCFD2,RNU6-310P	protein_coding,snRNA	SENSE,SENSE	ENSG00000184178,ENSG00000207385	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12da	L1	L1	L1FLnI	chr4	53258098	53267747	-	noncoding	SCFD2,RNU6-310P	protein_coding,snRNA	SENSE,SENSE	ENSG00000184178,ENSG00000207385	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12ea	L1	L1	L1FLnI	chr4	53294467	53304612	+	coding	SCFD2	protein_coding	ANTISENSE	ENSG00000184178	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12fa	L1	L1	L1FLnI	chr4	53325233	53335262	+	coding	SCFD2	protein_coding	ANTISENSE	ENSG00000184178	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12ga	L1	L1	L1FLnI	chr4	53336491	53346607	+	coding	SCFD2	protein_coding	ANTISENSE	ENSG00000184178	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12ha	L1	L1	L1FLnI	chr4	53403516	53413641	-	coding	FIP1L1,AC058822.1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000145216,ENSG00000282278	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12ia	L1	L1	L1FLnI	chr4	53462869	53472998	+	coding	AC058822.1,LNX1	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000282278,ENSG00000072201	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:53472675-53473026	None
L1FLnI_4q12ja	L1	L1	L1FLnI	chr4	53561139	53571178	+	coding	AC058822.1,LNX1	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000282278,ENSG00000072201	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12ka	L1	L1	L1FLnI	chr4	53561139	53571198	+	coding	AC058822.1,LNX1	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000282278,ENSG00000072201	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12la	L1	L1	L1FLnI	chr4	53663294	53673775	-	noncoding	AC058822.1,LNX1,AC124017.1	protein_coding,protein_coding,lncRNA	ANTISENSE,SENSE,ANTISENSE	ENSG00000282278,ENSG00000072201,ENSG00000249341	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12ma	L1	L1	L1FLnI	chr4	53823131	53833282	-	coding	AC058822.1	protein_coding	ANTISENSE	ENSG00000282278	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12na	L1	L1	L1FLnI	chr4	53829853	53840000	+	noncoding	AC058822.1	protein_coding	SENSE	ENSG00000282278	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12oa	L1	L1	L1FLnI	chr4	53873618	53883635	+	coding	AC058822.1	protein_coding	SENSE	ENSG00000282278	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12pa	L1	L1	L1FLnI	chr4	54240082	54250298	+	coding	AC058822.1,PDGFRA	protein_coding,protein_coding	SENSE,SENSE	ENSG00000282278,ENSG00000134853	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12qa	L1	L1	L1FLnI	chr4	54528436	54538593	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02260	ENSG00000250456	64618	AC098868.1	ENSG00000251264	81713	None	None
L1FLnI_4q12ra	L1	L1	L1FLnI	chr4	54758343	54767332	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097494.1	ENSG00000249727	68709	KIT	ENSG00000157404	17628	None	None
L1FLnI_4q12sa	L1	L1	L1FLnI	chr4	54758765	54767332	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097494.1	ENSG00000249727	68709	KIT	ENSG00000157404	18050	None	None
L1FLnI_4q12ta	L1	L1	L1FLnI	chr4	54803576	54813717	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KIT	ENSG00000157404	62861	AC097494.1	ENSG00000249727	22324	chr4:54806564-54806759	None
L1FLnI_4q12ua	L1	L1	L1FLnI	chr4	54820897	54831415	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	KIT	ENSG00000157404	80182	AC097494.1	ENSG00000249727	4626	None	None
L1FLnI_4q12va	L1	L1	L1FLnI	chr4	54984637	54993728	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL38P3	ENSG00000244422	8266	RNU6-410P	ENSG00000252815	38237	None	None
L1FLnI_4q12wa	L1	L1	L1FLnI	chr4	55037813	55047925	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-410P	ENSG00000252815	5742	AC111194.2	ENSG00000250646	5135	None	None
L1FLnI_4q12xa	L1	L1	L1FLnI	chr4	55163777	55173737	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL822P	ENSG00000239545	41887	AC021220.2	ENSG00000287060	1897	None	None
L1FLnI_4q12ya	L1	L1	L1FLnI	chr4	55235179	55244820	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-746P	ENSG00000206839	49670	AC021220.1	ENSG00000250812	15206	None	None
L1FLnI_4q12za	L1	L1	L1FLnI	chr4	55293663	55303786	+	noncoding	RNU6-746P	snRNA	SENSE	ENSG00000206839	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12ab	L1	L1	L1FLnI	chr4	55615655	55625681	+	coding	NMU	protein_coding	ANTISENSE	ENSG00000109255	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12bb	L1	L1	L1FLnI	chr4	55688155	55697450	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NMU	ENSG00000109255	51457	RNU6-276P	ENSG00000251923	101186	None	None
L1FLnI_4q12cb	L1	L1	L1FLnI	chr4	55704149	55714294	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NMU	ENSG00000109255	67451	RNU6-276P	ENSG00000251923	84342	None	None
L1FLnI_4q12db	L1	L1	L1FLnI	chr4	55838239	55848394	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	EXOC1L	ENSG00000250821	752	EXOC1	ENSG00000090989	5254	None	None
L1FLnI_4q12eb	L1	L1	L1FLnI	chr4	56330756	56340882	-	coding	AASDH	protein_coding	SENSE	ENSG00000157426	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12fb	L1	L1	L1FLnI	chr4	56359252	56369379	+	coding	AASDH	protein_coding	ANTISENSE	ENSG00000157426	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12gb	L1	L1	L1FLnI	chr4	56709147	56719270	+	coding	RPL17P20	processed_pseudogene	SENSE	ENSG00000241250	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:56710021-56710024
L1FLnI_4q12hb	L1	L1	L1FLnI	chr4	57380333	57390470	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS26P24	ENSG00000243920	27004	LINC02380	ENSG00000248505	34025	None	None
L1FLnI_4q12ib	L1	L1	L1FLnI	chr4	57531355	57541485	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC107396.1	ENSG00000251049	54455	AC013724.1	ENSG00000251459	35511	None	None
L1FLnI_4q12jb	L1	L1	L1FLnI	chr4	57561818	57571847	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC107396.1	ENSG00000251049	24093	AC013724.1	ENSG00000251459	65974	None	None
L1FLnI_4q12kb	L1	L1	L1FLnI	chr4	57618839	57628777	-	coding	AC093725.2	lncRNA	SENSE	ENSG00000250333	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q12lb	L1	L1	L1FLnI	chr4	57700557	57710654	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093725.1	ENSG00000249831	9381	AC093725.2	ENSG00000250333	41757	None	None
L1FLnI_4q12mb	L1	L1	L1FLnI	chr4	57705855	57714625	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093725.2	ENSG00000250333	47055	AC093725.1	ENSG00000249831	5410	None	None
L1FLnI_4q12nb	L1	L1	L1FLnI	chr4	57894241	57903112	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SRIP1	ENSG00000248660	200035	AC104790.1	ENSG00000285998	38970	None	None
L1FLnI_4q12ob	L1	L1	L1FLnI	chr4	57916169	57924735	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104790.1	ENSG00000285998	60898	SRIP1	ENSG00000248660	178412	None	None
L1FLnI_4q12pb	L1	L1	L1FLnI	chr4	58145762	58156221	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096725.1	ENSG00000249105	27692	LINC02494	ENSG00000250340	368294	None	None
L1FLnI_4q12qb	L1	L1	L1FLnI	chr4	58329865	58339970	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096725.1	ENSG00000249105	211795	LINC02494	ENSG00000250340	184545	None	None
L1FLnI_4q12rb	L1	L1	L1FLnI	chr4	58380309	58390869	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02494	ENSG00000250340	133646	AC096725.1	ENSG00000249105	262239	None	None
L1FLnI_4q12sb	L1	L1	L1FLnI	chr4	58424492	58435452	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02494	ENSG00000250340	89063	AC096725.1	ENSG00000249105	306422	None	None
L1FLnI_4q13.1a	L1	L1	L1FLnI	chr4	58579133	58589244	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC017091.1	ENSG00000251339	191382	AC019133.1	ENSG00000250078	13921	None	None
L1FLnI_4q13.1b	L1	L1	L1FLnI	chr4	58618432	58628038	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC019133.1	ENSG00000250078	53220	AC017091.1	ENSG00000251339	152588	None	None
L1FLI_4q13.1	L1	L1	L1FLI	chr4	59077844	59085891	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC097501.1	ENSG00000250375	2588	AC108517.2	ENSG00000286097	65033	None	None
L1FLnI_4q13.1c	L1	L1	L1FLnI	chr4	59202953	59213119	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108517.2	ENSG00000286097	22539	AC096588.1	ENSG00000199780	320667	None	None
L1FLnI_4q13.1d	L1	L1	L1FLnI	chr4	59416195	59426290	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108517.2	ENSG00000286097	235781	AC096588.1	ENSG00000199780	107496	None	None
L1FLnI_4q13.1e	L1	L1	L1FLnI	chr4	59474628	59484749	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108517.2	ENSG00000286097	294214	AC096588.1	ENSG00000199780	49037	None	None
L1FLnI_4q13.1f	L1	L1	L1FLnI	chr4	59474628	59483847	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108517.2	ENSG00000286097	294214	AC096588.1	ENSG00000199780	49939	None	None
L1FLnI_4q13.1g	L1	L1	L1FLnI	chr4	59553958	59564568	-	coding	AC096588.2	lncRNA	SENSE	ENSG00000249392	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.1h	L1	L1	L1FLnI	chr4	59652175	59662535	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC096588.2	ENSG00000249392	21851	AC093857.1	ENSG00000249892	105281	None	None
L1FLnI_4q13.1i	L1	L1	L1FLnI	chr4	59653400	59662535	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC096588.2	ENSG00000249392	23076	AC093857.1	ENSG00000249892	105281	None	None
L1FLnI_4q13.1j	L1	L1	L1FLnI	chr4	59839833	59848467	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1325P	ENSG00000201775	5666	AC092596.2	ENSG00000287174	54937	None	None
L1FLnI_4q13.1k	L1	L1	L1FLnI	chr4	59858134	59866867	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092596.2	ENSG00000287174	36537	RNU6-1325P	ENSG00000201775	23967	None	None
L1FLnI_4q13.1l	L1	L1	L1FLnI	chr4	59858134	59866868	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092596.2	ENSG00000287174	36536	RNU6-1325P	ENSG00000201775	23967	None	None
L1FLnI_4q13.1m	L1	L1	L1FLnI	chr4	59888485	59898622	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1325P	ENSG00000201775	54318	AC092596.2	ENSG00000287174	4782	None	None
L1FLnI_4q13.1n	L1	L1	L1FLnI	chr4	59888485	59898612	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1325P	ENSG00000201775	54318	AC092596.2	ENSG00000287174	4792	None	None
L1FLnI_4q13.1o	L1	L1	L1FLnI	chr4	59943700	59952536	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092596.2	ENSG00000287174	23030	AC097655.1	ENSG00000283043	85733	None	None
L1FLnI_4q13.1p	L1	L1	L1FLnI	chr4	60045553	60054523	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02496	ENSG00000249066	696052	AC097655.1	ENSG00000283043	6967	None	None
L1FLnI_4q13.1q	L1	L1	L1FLnI	chr4	60063314	60072543	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097655.1	ENSG00000283043	24728	LINC02496	ENSG00000249066	678032	None	None
L1FLnI_4q13.1r	L1	L1	L1FLnI	chr4	60077523	60087714	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097655.1	ENSG00000283043	38937	LINC02496	ENSG00000249066	662861	None	None
L1FLnI_4q13.1s	L1	L1	L1FLnI	chr4	60149939	60160353	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02496	ENSG00000249066	590222	AC097655.1	ENSG00000283043	111353	None	None
L1FLnI_4q13.1t	L1	L1	L1FLnI	chr4	60149972	60159914	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02496	ENSG00000249066	590661	AC097655.1	ENSG00000283043	111386	None	None
L1FLnI_4q13.1u	L1	L1	L1FLnI	chr4	60153792	60162600	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097655.1	ENSG00000283043	115206	LINC02496	ENSG00000249066	587975	None	None
L1FLnI_4q13.1v	L1	L1	L1FLnI	chr4	60412894	60423335	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02496	ENSG00000249066	327240	AC097655.1	ENSG00000283043	374308	None	None
L1FLnI_4q13.1w	L1	L1	L1FLnI	chr4	60563029	60574162	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02496	ENSG00000249066	176413	AC097655.1	ENSG00000283043	524443	None	None
L1FLnI_4q13.1x	L1	L1	L1FLnI	chr4	60597398	60607860	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02496	ENSG00000249066	142715	AC097655.1	ENSG00000283043	558812	None	None
L1FLnI_4q13.1y	L1	L1	L1FLnI	chr4	60692378	60702451	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC097655.1	ENSG00000283043	653792	LINC02496	ENSG00000249066	48124	None	None
L1FLnI_4q13.1z	L1	L1	L1FLnI	chr4	60731261	60739934	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02496	ENSG00000249066	10641	AC097655.1	ENSG00000283043	692675	None	None
L1FLnI_4q13.1aa	L1	L1	L1FLnI	chr4	60830775	60840784	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548AG1	ENSG00000265829	81835	LINC02496	ENSG00000249066	34672	None	None
L1FLnI_4q13.1ba	L1	L1	L1FLnI	chr4	61008163	61018288	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548AG1	ENSG00000265829	85479	LINC02271	ENSG00000240152	125368	None	None
L1FLnI_4q13.1ca	L1	L1	L1FLnI	chr4	61015070	61024658	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548AG1	ENSG00000265829	92386	LINC02271	ENSG00000240152	118998	None	None
L1FLnI_4q13.1da	L1	L1	L1FLnI	chr4	61366741	61376748	-	coding	ADGRL3	protein_coding	ANTISENSE	ENSG00000150471	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.1ea	L1	L1	L1FLnI	chr4	61640781	61650803	-	coding	ADGRL3	protein_coding	ANTISENSE	ENSG00000150471	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.1fa	L1	L1	L1FLnI	chr4	61640796	61650803	-	coding	ADGRL3	protein_coding	ANTISENSE	ENSG00000150471	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.1ga	L1	L1	L1FLnI	chr4	61741558	61750369	+	coding	ADGRL3	protein_coding	SENSE	ENSG00000150471	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:61750178-61750183
L1FLnI_4q13.1ha	L1	L1	L1FLnI	chr4	61754120	61764305	-	coding	ADGRL3	protein_coding	ANTISENSE	ENSG00000150471	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.1ia	L1	L1	L1FLnI	chr4	61939429	61949462	-	coding	ADGRL3	protein_coding	ANTISENSE	ENSG00000150471	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.1ja	L1	L1	L1FLnI	chr4	62087840	62098302	-	noncoding	ADGRL3-AS1	lncRNA	SENSE	ENSG00000248692	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:62094968-62095185	None
L1FLnI_4q13.1ka	L1	L1	L1FLnI	chr4	62147206	62156219	+	noncoding	ADGRL3-AS1	lncRNA	ANTISENSE	ENSG00000248692	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.1la	L1	L1	L1FLnI	chr4	62299624	62309573	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105313.1	ENSG00000250249	7287	AC074087.2	ENSG00000288567	144672	None	None
L1FLnI_4q13.1ma	L1	L1	L1FLnI	chr4	62305762	62315883	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC105313.1	ENSG00000250249	13425	AC074087.2	ENSG00000288567	138362	None	None
L1FLnI_4q13.1na	L1	L1	L1FLnI	chr4	62565941	62575870	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	EXOC5P1	ENSG00000180673	240956	HMGN1P11	ENSG00000248336	55170	None	None
L1FLnI_4q13.1oa	L1	L1	L1FLnI	chr4	62598778	62608802	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN1P11	ENSG00000248336	88007	EXOC5P1	ENSG00000180673	208024	None	None
L1FLnI_4q13.1pa	L1	L1	L1FLnI	chr4	62726450	62736469	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	EXOC5P1	ENSG00000180673	80357	HMGN1P11	ENSG00000248336	215679	None	None
L1FLnI_4q13.1qa	L1	L1	L1FLnI	chr4	63094947	63103554	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	EXOC5P1	ENSG00000180673	276153	AC097491.1	ENSG00000251055	24757	None	None
L1FLnI_4q13.1ra	L1	L1	L1FLnI	chr4	63094947	63103581	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	EXOC5P1	ENSG00000180673	276153	AC097491.1	ENSG00000251055	24730	None	None
L1FLnI_4q13.1sa	L1	L1	L1FLnI	chr4	63244491	63254459	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LARP1BP1	ENSG00000231442	95655	AC097491.1	ENSG00000251055	100610	None	None
L1FLnI_4q13.1ta	L1	L1	L1FLnI	chr4	63271217	63281797	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097491.1	ENSG00000251055	127336	LARP1BP1	ENSG00000231442	68317	None	None
L1FLnI_4q13.1ua	L1	L1	L1FLnI	chr4	63330103	63340223	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097491.1	ENSG00000251055	186222	LARP1BP1	ENSG00000231442	9891	None	None
L1FLnI_4q13.1va	L1	L1	L1FLnI	chr4	63529023	63539053	+	coding	AC093730.1	lncRNA	ANTISENSE	ENSG00000250775	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.1wa	L1	L1	L1FLnI	chr4	63586109	63596826	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093730.1	ENSG00000250775	56348	TECRL	ENSG00000205678	678431	None	None
L1FLnI_4q13.1xa	L1	L1	L1FLnI	chr4	63808376	63817691	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TECRL	ENSG00000205678	457566	AC093730.1	ENSG00000250775	278615	None	None
L1FLnI_4q13.1ya	L1	L1	L1FLnI	chr4	63926263	63934834	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093730.1	ENSG00000250775	396502	TECRL	ENSG00000205678	340423	None	None
L1FLnI_4q13.1za	L1	L1	L1FLnI	chr4	63947576	63957138	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TECRL	ENSG00000205678	318119	AC093730.1	ENSG00000250775	417815	None	None
L1FLnI_4q13.1ab	L1	L1	L1FLnI	chr4	64795988	64805761	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104689.1	ENSG00000244669	28091	AC104689.2	ENSG00000286664	30600	None	None
L1FLnI_4q13.1bb	L1	L1	L1FLnI	chr4	64858616	64868671	-	coding	AC104689.2	lncRNA	SENSE	ENSG00000286664	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.1cb	L1	L1	L1FLnI	chr4	64858642	64868671	-	coding	AC104689.2	lncRNA	SENSE	ENSG00000286664	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.1db	L1	L1	L1FLnI	chr4	64916610	64926043	+	noncoding	LINC02232	lncRNA	ANTISENSE	ENSG00000250125	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.1eb	L1	L1	L1FLnI	chr4	65051668	65061698	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	EFL1P2	ENSG00000248998	81005	AC107058.1	ENSG00000248447	15651	None	None
L1FLnI_4q13.1fb	L1	L1	L1FLnI	chr4	65051668	65060396	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	EFL1P2	ENSG00000248998	82307	AC107058.1	ENSG00000248447	15651	None	None
L1FLnI_4q13.1gb	L1	L1	L1FLnI	chr4	65173113	65183112	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	EFL1P2	ENSG00000248998	27350	AC096754.1	ENSG00000249351	33504	None	None
L1FLnI_4q13.1hb	L1	L1	L1FLnI	chr4	65287739	65297761	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	EPHA5	ENSG00000145242	21802	LINC02835	ENSG00000285711	45925	None	None
L1FLnI_4q13.2a	L1	L1	L1FLnI	chr4	65766912	65775768	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU2-40P	ENSG00000222765	31472	AC104137.1	ENSG00000248479	61359	None	None
L1FLnI_4q13.2b	L1	L1	L1FLnI	chr4	65992801	66002802	-	coding	AC116049.2	lncRNA	ANTISENSE	ENSG00000249413	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.2c	L1	L1	L1FLnI	chr4	66263363	66272855	+	noncoding	AC110809.1	lncRNA	ANTISENSE	ENSG00000287383	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.2d	L1	L1	L1FLnI	chr4	66379719	66389177	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC110809.1	ENSG00000287383	50342	RPS23P3	ENSG00000244099	41915	None	None
L1FLnI_4q13.2e	L1	L1	L1FLnI	chr4	66419367	66428654	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC110809.1	ENSG00000287383	89990	RPS23P3	ENSG00000244099	2438	None	chr4:66426928-66426932
L1FLnI_4q13.2f	L1	L1	L1FLnI	chr4	66456837	66466978	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-699P	ENSG00000252890	430284	RPS23P3	ENSG00000244099	25316	None	None
L1FLnI_4q13.2g	L1	L1	L1FLnI	chr4	66541626	66551755	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS23P3	ENSG00000244099	110105	RNU6-699P	ENSG00000252890	345507	None	None
L1FLnI_4q13.2h	L1	L1	L1FLnI	chr4	66612538	66622377	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-699P	ENSG00000252890	274885	RPS23P3	ENSG00000244099	181017	None	None
L1FLnI_4q13.2i	L1	L1	L1FLnI	chr4	66710102	66720564	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS23P3	ENSG00000244099	278581	RNU6-699P	ENSG00000252890	176698	None	None
L1FLnI_4q13.2j	L1	L1	L1FLnI	chr4	67061891	67072023	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104806.2	ENSG00000250075	345282	RNU6-699P	ENSG00000252890	164520	None	None
L1FLnI_4q13.2k	L1	L1	L1FLnI	chr4	67173544	67183558	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-699P	ENSG00000252890	276173	AC104806.2	ENSG00000250075	233747	None	None
L1FLnI_4q13.2l	L1	L1	L1FLnI	chr4	67267720	67277836	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104806.2	ENSG00000250075	139469	RNU6-699P	ENSG00000252890	370349	None	None
L1FLnI_4q13.2m	L1	L1	L1FLnI	chr4	67294352	67304625	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104806.2	ENSG00000250075	112680	RNU6-699P	ENSG00000252890	396981	None	None
L1FLnI_4q13.2n	L1	L1	L1FLnI	chr4	67599442	67607969	-	noncoding	STAP1,AC096720.2	protein_coding,TEC	ANTISENSE,SENSE	ENSG00000035720,ENSG00000279464	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.2o	L1	L1	L1FLnI	chr4	67649060	67659197	+	noncoding	UBA6	protein_coding	ANTISENSE	ENSG00000033178	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.2p	L1	L1	L1FLnI	chr4	67807658	67816225	+	noncoding	UBA6-AS1	lncRNA	SENSE	ENSG00000248049	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.2q	L1	L1	L1FLnI	chr4	67966916	67976942	-	coding	UBA6-AS1	lncRNA	ANTISENSE	ENSG00000248049	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.2r	L1	L1	L1FLnI	chr4	68142414	68152214	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FTLP10	ENSG00000250426	30078	TMPRSS11F	ENSG00000198092	12545	None	None
L1FLnI_4q13.2s	L1	L1	L1FLnI	chr4	68190560	68200704	+	coding	FTLP10,TMPRSS11BNL	transcribed_processed_pseudogene,transcribed_unprocessed_pseudogene	SENSE,ANTISENSE	ENSG00000250426,ENSG00000250026	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.2t	L1	L1	L1FLnI	chr4	68416755	68426833	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MT2P1	ENSG00000162840	40250	TMPRSS11E	ENSG00000087128	20630	None	None
L1FLnI_4q13.2u	L1	L1	L1FLnI	chr4	68509306	68519320	-	coding	UGT2B29P	unprocessed_pseudogene	SENSE	ENSG00000250566	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.2v	L1	L1	L1FLnI	chr4	68529935	68540163	-	noncoding	UGT2B17	protein_coding	SENSE	ENSG00000197888	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.2w	L1	L1	L1FLnI	chr4	68538957	68549083	+	coding	UGT2B17	protein_coding	ANTISENSE	ENSG00000197888	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.2x	L1	L1	L1FLnI	chr4	68639744	68649886	-	coding	UGT2B15	protein_coding	SENSE	ENSG00000196620	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.2y	L1	L1	L1FLnI	chr4	68641194	68649886	-	coding	UGT2B15	protein_coding	SENSE	ENSG00000196620	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.2z	L1	L1	L1FLnI	chr4	68677000	68687161	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC147055.1	ENSG00000248635	17439	UGT2B15	ENSG00000196620	6348	None	None
L1FLnI_4q13.2aa	L1	L1	L1FLnI	chr4	68767714	68777869	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093720.1	ENSG00000250376	6749	AC147055.1	ENSG00000248635	55216	None	None
L1FLnI_4q13.2ba	L1	L1	L1FLnI	chr4	68931832	68941192	+	coding	UGT2A3	protein_coding	ANTISENSE	ENSG00000135220	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr4:68936885-68936887
L1FLnI_4q13.3a	L1	L1	L1FLnI	chr4	69498841	69509356	+	noncoding	UGT2B4	protein_coding	ANTISENSE	ENSG00000156096	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:69509062-69509190	None
L1FLnI_4q13.3b	L1	L1	L1FLnI	chr4	69546177	69555710	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UGT2B4	ENSG00000156096	20163	AC093829.1	ENSG00000251177	16681	None	None
L1FLnI_4q13.3c	L1	L1	L1FLnI	chr4	69599888	69609077	+	coding	UGT2A1,UGT2A2	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000173610,ENSG00000271271	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.3d	L1	L1	L1FLnI	chr4	70206717	70216858	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FDCSP	ENSG00000181617	9266	ODAM	ENSG00000109205	2141	None	None
L1FLnI_4q13.3e	L1	L1	L1FLnI	chr4	70325408	70334807	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CSN3	ENSG00000171209	73980	CABS1	ENSG00000145309	174	None	None
L1FLnI_4q13.3f	L1	L1	L1FLnI	chr4	70417408	70427557	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MUC7	ENSG00000171195	2935	OPRPN	ENSG00000171199	7213	None	None
L1FLnI_4q13.3g	L1	L1	L1FLnI	chr4	70431252	70441356	-	coding	MUC7	protein_coding	ANTISENSE	ENSG00000171195	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.3h	L1	L1	L1FLnI	chr4	70460460	70470890	+	coding	MUC7	protein_coding	SENSE	ENSG00000171195	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.3i	L1	L1	L1FLnI	chr4	70998521	71008921	-	noncoding	MOB1B,DCK	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000173542,ENSG00000156136	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:71006281-71006548	None
L1FLnI_4q13.3j	L1	L1	L1FLnI	chr4	71008680	71018435	+	coding	MOB1B,DCK	protein_coding,protein_coding	SENSE,SENSE	ENSG00000173542,ENSG00000156136	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:71011255-71011260
L1FLnI_4q13.3k	L1	L1	L1FLnI	chr4	71053338	71063357	-	coding	SLC4A4	protein_coding	ANTISENSE	ENSG00000080493	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:71062643-71062653,chr4:71062654-71062665,chr4:71062674-71062686
L1FLnI_4q13.3l	L1	L1	L1FLnI	chr4	71083907	71093996	-	coding	SLC4A4	protein_coding	ANTISENSE	ENSG00000080493	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.3m	L1	L1	L1FLnI	chr4	71098037	71107436	+	coding	SLC4A4	protein_coding	SENSE	ENSG00000080493	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.3n	L1	L1	L1FLnI	chr4	71098037	71107425	+	coding	SLC4A4	protein_coding	SENSE	ENSG00000080493	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.3o	L1	L1	L1FLnI	chr4	71171708	71181871	+	coding	SLC4A4	protein_coding	SENSE	ENSG00000080493	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.3p	L1	L1	L1FLnI	chr4	71304929	71315445	+	noncoding	SLC4A4	protein_coding	SENSE	ENSG00000080493	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:71305753-71305764
L1FLnI_4q13.3q	L1	L1	L1FLnI	chr4	71416331	71425503	+	coding	SLC4A4	protein_coding	SENSE	ENSG00000080493	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.3r	L1	L1	L1FLnI	chr4	71612296	71622442	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC4A4	ENSG00000080493	40209	GC	ENSG00000145321	119254	None	None
L1FLnI_4q13.3s	L1	L1	L1FLnI	chr4	71791168	71801303	-	coding	GC	protein_coding	SENSE	ENSG00000145321	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.3t	L1	L1	L1FLnI	chr4	71887629	71898177	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068721.1	ENSG00000248567	63649	NPFFR2	ENSG00000056291	133627	None	None
L1FLnI_4q13.3u	L1	L1	L1FLnI	chr4	71887629	71897159	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068721.1	ENSG00000248567	63649	NPFFR2	ENSG00000056291	134645	None	None
L1FLnI_4q13.3v	L1	L1	L1FLnI	chr4	71944105	71954197	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC068721.1	ENSG00000248567	120125	NPFFR2	ENSG00000056291	77607	None	None
L1FLnI_4q13.3w	L1	L1	L1FLnI	chr4	72088336	72098262	-	noncoding	NPFFR2	protein_coding	ANTISENSE	ENSG00000056291	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.3x	L1	L1	L1FLnI	chr4	72115980	72125859	+	noncoding	NPFFR2	protein_coding	SENSE	ENSG00000056291	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.3y	L1	L1	L1FLnI	chr4	72163278	72173419	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ADAMTS3	ENSG00000156140	107550	NPFFR2	ENSG00000056291	15211	None	None
L1FLnI_4q13.3z	L1	L1	L1FLnI	chr4	72230369	72240505	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ADAMTS3	ENSG00000156140	40464	NPFFR2	ENSG00000056291	82302	None	None
L1FLnI_4q13.3aa	L1	L1	L1FLnI	chr4	72489372	72498593	-	noncoding	ADAMTS3	protein_coding	SENSE	ENSG00000156140	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.3ba	L1	L1	L1FLnI	chr4	72514336	72524493	-	coding	ADAMTS3	protein_coding	SENSE	ENSG00000156140	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.3ca	L1	L1	L1FLnI	chr4	72590215	72600363	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ADAMTS3	ENSG00000156140	20994	HNRNPA1P67	ENSG00000270665	206904	None	None
L1FLnI_4q13.3da	L1	L1	L1FLnI	chr4	72675843	72685279	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADAMTS3	ENSG00000156140	106622	HNRNPA1P67	ENSG00000270665	121988	None	None
L1FLnI_4q13.3ea	L1	L1	L1FLnI	chr4	72726884	72736561	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADAMTS3	ENSG00000156140	157663	HNRNPA1P67	ENSG00000270665	70706	None	None
L1FLnI_4q13.3fa	L1	L1	L1FLnI	chr4	72747258	72756928	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADAMTS3	ENSG00000156140	178037	HNRNPA1P67	ENSG00000270665	50339	None	None
L1FLnI_4q13.3ga	L1	L1	L1FLnI	chr4	72835006	72845162	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU4ATAC9P	ENSG00000252955	120016	HNRNPA1P67	ENSG00000270665	26814	None	None
L1FLnI_4q13.3ha	L1	L1	L1FLnI	chr4	72844169	72853390	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA1P67	ENSG00000270665	35977	RNU4ATAC9P	ENSG00000252955	111788	None	None
L1FLnI_4q13.3ia	L1	L1	L1FLnI	chr4	72844169	72853424	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA1P67	ENSG00000270665	35977	RNU4ATAC9P	ENSG00000252955	111754	None	None
L1FLnI_4q13.3ja	L1	L1	L1FLnI	chr4	72864824	72874494	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA1P67	ENSG00000270665	56632	RNU4ATAC9P	ENSG00000252955	90684	None	None
L1FLnI_4q13.3ka	L1	L1	L1FLnI	chr4	72878290	72888366	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU4ATAC9P	ENSG00000252955	76812	HNRNPA1P67	ENSG00000270665	70098	None	None
L1FLnI_4q13.3la	L1	L1	L1FLnI	chr4	73356657	73366746	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108157.1	ENSG00000249976	18886	ALB	ENSG00000163631	30368	None	None
L1FLnI_4q13.3ma	L1	L1	L1FLnI	chr4	73468167	73477498	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AFM	ENSG00000079557	4247	AFP	ENSG00000081051	11993	None	None
L1FLnI_4q13.3na	L1	L1	L1FLnI	chr4	73511471	73522474	-	noncoding	LINC02499	lncRNA	ANTISENSE	ENSG00000250436	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.3oa	L1	L1	L1FLnI	chr4	73547131	73557286	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC074250.1	ENSG00000249970	3118	RASSF6	ENSG00000169435	14264	None	None
L1FLnI_4q13.3pa	L1	L1	L1FLnI	chr4	73627407	73639343	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RASSF6	ENSG00000169435	6776	UMLILO	ENSG00000228277	70959	None	None
L1FLnI_4q13.3qa	L1	L1	L1FLnI	chr4	73627407	73637030	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RASSF6	ENSG00000169435	6776	UMLILO	ENSG00000228277	73272	None	None
L1FLnI_4q13.3ra	L1	L1	L1FLnI	chr4	73964117	73974878	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CXCL1P1	ENSG00000250339	19793	PF4	ENSG00000163737	5933	None	None
L1FLnI_4q13.3sa	L1	L1	L1FLnI	chr4	74208714	74219159	-	noncoding	MTHFD2L	protein_coding	ANTISENSE	ENSG00000163738	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:74217258-74217738	chr4:74217491-74217521
L1FLnI_4q13.3ta	L1	L1	L1FLnI	chr4	74244983	74253713	-	coding	MTHFD2L	protein_coding	ANTISENSE	ENSG00000163738	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.3ua	L1	L1	L1FLnI	chr4	74495491	74504871	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC239584.1	ENSG00000249942	47713	AREG	ENSG00000109321	40486	None	None
L1FLnI_4q13.3va	L1	L1	L1FLnI	chr4	74501832	74511974	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AREG	ENSG00000109321	46827	AC239584.1	ENSG00000249942	40610	None	None
L1FLnI_4q13.3wa	L1	L1	L1FLnI	chr4	74676684	74687333	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BTC	ENSG00000174808	57426	AC239584.1	ENSG00000249942	87203	None	None
L1FLI_4q13.3	L1	L1	L1FLI	chr4	74716543	74724589	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	BTC	ENSG00000174808	20170	AC239584.1	ENSG00000249942	127062	None	None
L1FLnI_4q13.3xa	L1	L1	L1FLnI	chr4	74856072	74866476	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BTC	ENSG00000174808	61549	AC098825.1	ENSG00000287375	14698	None	None
L1FLnI_4q13.3ya	L1	L1	L1FLnI	chr4	74909714	74920145	-	noncoding	HSPE1P23	processed_pseudogene	ANTISENSE	ENSG00000250356	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q13.3za	L1	L1	L1FLnI	chr4	74972295	74982094	+	noncoding	PARM1	protein_coding	SENSE	ENSG00000169116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:74976931-74976980	None
L1FLnI_4q13.3ab	L1	L1	L1FLnI	chr4	75073744	75083889	-	noncoding	LINC02562	lncRNA	SENSE	ENSG00000260265	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:75083519-75083526
L1FLnI_4q13.3bb	L1	L1	L1FLnI	chr4	75074715	75083889	-	noncoding	LINC02562	lncRNA	SENSE	ENSG00000260265	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:75083519-75083526
L1FLnI_4q13.3cb	L1	L1	L1FLnI	chr4	75106358	75115739	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC110760.3	ENSG00000250315	4415	AC093870.1	ENSG00000250560	79128	None	None
L1FLnI_4q13.3db	L1	L1	L1FLnI	chr4	75123307	75133338	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC110760.3	ENSG00000250315	21364	AC093870.1	ENSG00000250560	61529	None	None
L1FLnI_4q13.3eb	L1	L1	L1FLnI	chr4	75177115	75186900	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC110760.3	ENSG00000250315	75172	AC093870.1	ENSG00000250560	7967	chr4:75181327-75181635	None
L1FLnI_4q13.3fb	L1	L1	L1FLnI	chr4	75214517	75224674	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC025244.1	ENSG00000251185	44394	AC093870.1	ENSG00000250560	19438	None	None
L1FLnI_4q13.3gb	L1	L1	L1FLnI	chr4	75218259	75228010	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093870.1	ENSG00000250560	23180	AC025244.1	ENSG00000251185	41058	None	None
L1FLnI_4q13.3hb	L1	L1	L1FLnI	chr4	75270081	75280107	-	coding	AC025244.1	lncRNA	SENSE	ENSG00000251185	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.1a	L1	L1	L1FLnI	chr4	75374736	75384674	+	noncoding	AC096759.1	lncRNA	ANTISENSE	ENSG00000248646	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.1b	L1	L1	L1FLnI	chr4	75397696	75407726	+	coding	AC096759.1,AC096759.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000248646,ENSG00000250735	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.1c	L1	L1	L1FLnI	chr4	75407856	75416800	-	noncoding	AC096759.1,AC096759.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000248646,ENSG00000250735	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.1d	L1	L1	L1FLnI	chr4	75431513	75441680	+	noncoding	AC096759.1	lncRNA	ANTISENSE	ENSG00000248646	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:75434193-75434209,chr4:75434212-75434217
L1FLnI_4q21.1e	L1	L1	L1FLnI	chr4	75431513	75442090	+	noncoding	AC096759.1	lncRNA	ANTISENSE	ENSG00000248646	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:75434193-75434209,chr4:75434212-75434217
L1FLnI_4q21.1f	L1	L1	L1FLnI	chr4	75442038	75452052	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RCHY1	ENSG00000163743	26985	AC096759.1	ENSG00000248646	7589	None	None
L1FLnI_4q21.1g	L1	L1	L1FLnI	chr4	76284346	76294559	-	noncoding	AC034139.1,FAM47E-STBD1	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000287401,ENSG00000272414	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.1h	L1	L1	L1FLnI	chr4	76474177	76484653	+	noncoding	SHROOM3	protein_coding	SENSE	ENSG00000138771	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.1i	L1	L1	L1FLnI	chr4	77295023	77305120	-	noncoding	CCNG2	protein_coding	ANTISENSE	ENSG00000138764	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.1j	L1	L1	L1FLnI	chr4	77321157	77331242	-	noncoding	CCNG2	protein_coding	ANTISENSE	ENSG00000138764	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.1k	L1	L1	L1FLnI	chr4	77458118	77468238	-	coding	AC092674.1	lncRNA	SENSE	ENSG00000249036	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.1l	L1	L1	L1FLnI	chr4	77469874	77479433	+	noncoding	AC092674.1	lncRNA	ANTISENSE	ENSG00000249036	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.1m	L1	L1	L1FLnI	chr4	77513328	77522854	-	noncoding	CXCL13	protein_coding	ANTISENSE	ENSG00000156234	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:77522545-77522546
L1FLnI_4q21.1n	L1	L1	L1FLnI	chr4	77518922	77528358	-	coding	CXCL13	protein_coding	ANTISENSE	ENSG00000156234	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:77522545-77522546
L1FLnI_4q21.1o	L1	L1	L1FLnI	chr4	77640080	77648826	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CXCL13	ENSG00000156234	28246	AC104701.1	ENSG00000221711	53920	None	None
L1FLnI_4q21.1p	L1	L1	L1FLnI	chr4	77650940	77661334	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CXCL13	ENSG00000156234	39106	AC104701.1	ENSG00000221711	41412	chr4:77650706-77651040	None
L1FLnI_4q21.21a	L1	L1	L1FLnI	chr4	78102237	78112265	+	coding	FRAS1	protein_coding	SENSE	ENSG00000138759	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.21b	L1	L1	L1FLnI	chr4	78112334	78122467	-	noncoding	FRAS1	protein_coding	ANTISENSE	ENSG00000138759	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.21c	L1	L1	L1FLnI	chr4	78270820	78280963	-	noncoding	FRAS1	protein_coding	ANTISENSE	ENSG00000138759	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.21d	L1	L1	L1FLnI	chr4	78301355	78311382	-	coding	FRAS1	protein_coding	ANTISENSE	ENSG00000138759	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_4q21.21a	L1	L1	L1FLI	chr4	78346979	78355029	+	coding	FRAS1	protein_coding	SENSE	ENSG00000138759	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.21e	L1	L1	L1FLnI	chr4	78501223	78510387	-	coding	FRAS1	protein_coding	ANTISENSE	ENSG00000138759	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.21f	L1	L1	L1FLnI	chr4	78975940	78986089	-	coding	LINC01088	lncRNA	ANTISENSE	ENSG00000249307	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.21g	L1	L1	L1FLnI	chr4	79123276	79132208	-	noncoding	LINC01088	lncRNA	ANTISENSE	ENSG00000249307	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.21h	L1	L1	L1FLnI	chr4	79689274	79699928	-	noncoding	LINC02469	lncRNA	ANTISENSE	ENSG00000248408	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:79691231-79691243
L1FLnI_4q21.21i	L1	L1	L1FLnI	chr4	79701054	79711081	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02469	ENSG00000248408	4217	PCAT4	ENSG00000251321	116390	chr4:79702359-79702641	None
L1FLnI_4q21.21j	L1	L1	L1FLnI	chr4	79768129	79777828	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02469	ENSG00000248408	71292	PCAT4	ENSG00000251321	49643	None	None
L1FLI_4q21.21b	L1	L1	L1FLI	chr4	79936713	79944762	+	coding	ANTXR2	protein_coding	ANTISENSE	ENSG00000163297	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.21k	L1	L1	L1FLnI	chr4	79963409	79973433	+	coding	ANTXR2	protein_coding	ANTISENSE	ENSG00000163297	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.21l	L1	L1	L1FLnI	chr4	79983080	79992629	+	noncoding	ANTXR2	protein_coding	ANTISENSE	ENSG00000163297	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.21m	L1	L1	L1FLnI	chr4	80111867	80121424	+	noncoding	ANTXR2	protein_coding	ANTISENSE	ENSG00000163297	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.21n	L1	L1	L1FLnI	chr4	80355125	80363711	-	noncoding	CFAP299	protein_coding	ANTISENSE	ENSG00000197826	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:80362812-80362851
L1FLnI_4q21.21o	L1	L1	L1FLnI	chr4	80435755	80446182	+	noncoding	CFAP299	protein_coding	SENSE	ENSG00000197826	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.21p	L1	L1	L1FLnI	chr4	80619939	80630095	+	noncoding	CFAP299	protein_coding	SENSE	ENSG00000197826	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.21q	L1	L1	L1FLnI	chr4	80669485	80679675	-	noncoding	CFAP299	protein_coding	ANTISENSE	ENSG00000197826	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.21r	L1	L1	L1FLnI	chr4	80684176	80694206	+	coding	CFAP299	protein_coding	SENSE	ENSG00000197826	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.21s	L1	L1	L1FLnI	chr4	80854908	80865062	-	coding	CFAP299	protein_coding	ANTISENSE	ENSG00000197826	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.21t	L1	L1	L1FLnI	chr4	80881260	80890979	+	noncoding	CFAP299	protein_coding	SENSE	ENSG00000197826	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.21u	L1	L1	L1FLnI	chr4	81151699	81160621	+	coding	PRKG2	protein_coding	ANTISENSE	ENSG00000138669	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.21v	L1	L1	L1FLnI	chr4	81151699	81160644	+	coding	PRKG2	protein_coding	ANTISENSE	ENSG00000138669	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.21w	L1	L1	L1FLnI	chr4	81179693	81189536	+	noncoding	PRKG2,AC139722.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000138669,ENSG00000251059	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.21x	L1	L1	L1FLnI	chr4	81264204	81273653	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU5A-2P	ENSG00000207065	60650	PRKG2	ENSG00000138669	49087	None	None
L1FLnI_4q21.22a	L1	L1	L1FLnI	chr4	81711440	81721012	+	noncoding	RASGEF1B	protein_coding	ANTISENSE	ENSG00000138670	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:81713271-81713273
L1FLnI_4q21.22b	L1	L1	L1FLnI	chr4	81931248	81941425	-	coding	RASGEF1B	protein_coding	SENSE	ENSG00000138670	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.22c	L1	L1	L1FLnI	chr4	81934427	81943054	+	noncoding	RASGEF1B	protein_coding	ANTISENSE	ENSG00000138670	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.22d	L1	L1	L1FLnI	chr4	82149402	82158636	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA3P13	ENSG00000250826	19746	RNU6-499P	ENSG00000202485	15911	None	None
L1FLnI_4q21.22e	L1	L1	L1FLnI	chr4	82171912	82182051	+	noncoding	RNU6-499P	snRNA	SENSE	ENSG00000202485	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.22f	L1	L1	L1FLnI	chr4	82171912	82182038	+	noncoding	RNU6-499P	snRNA	SENSE	ENSG00000202485	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.22g	L1	L1	L1FLnI	chr4	82180621	82190781	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-499P	ENSG00000202485	5968	BIN2P1	ENSG00000234568	84290	None	None
L1FLnI_4q21.22h	L1	L1	L1FLnI	chr4	82197550	82208546	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-499P	ENSG00000202485	22897	BIN2P1	ENSG00000234568	66525	None	None
L1FLnI_4q21.22i	L1	L1	L1FLnI	chr4	82297037	82307186	-	coding	VAMP9P	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000284516	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.22j	L1	L1	L1FLnI	chr4	83160564	83170708	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PLAC8	ENSG00000145287	23489	AC114781.2	ENSG00000250057	62804	None	None
L1FLnI_4q21.23a	L1	L1	L1FLnI	chr4	83238126	83247452	+	noncoding	AC114781.2,AC114781.1	lncRNA,processed_pseudogene	ANTISENSE,SENSE	ENSG00000250057,ENSG00000248401	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.23b	L1	L1	L1FLnI	chr4	83394408	83404539	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC114781.4	ENSG00000251647	16332	HELQ	ENSG00000163312	2804	None	None
L1FLnI_4q21.23c	L1	L1	L1FLnI	chr4	83951677	83961705	-	coding	AC079160.1	lncRNA	SENSE	ENSG00000250546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:83951695-83951988	None
L1FLnI_4q21.23d	L1	L1	L1FLnI	chr4	83951690	83961705	-	coding	AC079160.1	lncRNA	SENSE	ENSG00000250546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:83951695-83951988	None
L1FLnI_4q21.23e	L1	L1	L1FLnI	chr4	84069974	84079020	+	coding	AC079160.1	lncRNA	ANTISENSE	ENSG00000250546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.23f	L1	L1	L1FLnI	chr4	84123287	84133314	+	coding	AC079160.1	lncRNA	ANTISENSE	ENSG00000250546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:84125540-84125543,chr4:84126216-84126222
L1FLnI_4q21.23g	L1	L1	L1FLnI	chr4	84295282	84305310	+	coding	AC079160.1	lncRNA	ANTISENSE	ENSG00000250546	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.23h	L1	L1	L1FLnI	chr4	84333884	84342889	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104063.1	ENSG00000248749	28504	AC079160.1	ENSG00000250546	34695	None	None
L1FLnI_4q21.23i	L1	L1	L1FLnI	chr4	84983708	84993888	+	coding	WDFY3-AS2	lncRNA	SENSE	ENSG00000180769	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.23j	L1	L1	L1FLnI	chr4	85039847	85050188	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	WDFY3-AS2	ENSG00000180769	28570	RN7SKP48	ENSG00000201901	50308	None	None
L1FLnI_4q21.23k	L1	L1	L1FLnI	chr4	85160158	85170463	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097488.1	ENSG00000248725	75694	RN7SKP48	ENSG00000201901	59335	None	None
L1FLnI_4q21.23l	L1	L1	L1FLnI	chr4	85500219	85510379	-	noncoding	ARHGAP24	protein_coding	ANTISENSE	ENSG00000138639	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.23m	L1	L1	L1FLnI	chr4	85621601	85631725	-	noncoding	ARHGAP24	protein_coding	ANTISENSE	ENSG00000138639	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.23n	L1	L1	L1FLnI	chr4	85661020	85671143	-	coding	ARHGAP24	protein_coding	ANTISENSE	ENSG00000138639	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.23o	L1	L1	L1FLnI	chr4	85689189	85697734	-	coding	ARHGAP24	protein_coding	ANTISENSE	ENSG00000138639	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.23p	L1	L1	L1FLnI	chr4	85848104	85857114	-	coding	ARHGAP24	protein_coding	ANTISENSE	ENSG00000138639	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.3a	L1	L1	L1FLnI	chr4	86069892	86079919	-	coding	MAPK10	polymorphic_pseudogene	SENSE	ENSG00000109339	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.3b	L1	L1	L1FLnI	chr4	86108735	86118974	-	noncoding	MAPK10,MAPK10-AS1	polymorphic_pseudogene,lncRNA	SENSE,ANTISENSE	ENSG00000109339,ENSG00000250062	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.3c	L1	L1	L1FLnI	chr4	86131173	86141196	+	coding	MAPK10,MAPK10-AS1	polymorphic_pseudogene,lncRNA	ANTISENSE,SENSE	ENSG00000109339,ENSG00000250062	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.3d	L1	L1	L1FLnI	chr4	86187284	86197701	-	noncoding	MAPK10,MAPK10-AS1	polymorphic_pseudogene,lncRNA	SENSE,ANTISENSE	ENSG00000109339,ENSG00000250062	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.3e	L1	L1	L1FLnI	chr4	86236362	86246744	-	noncoding	MAPK10	polymorphic_pseudogene	SENSE	ENSG00000109339	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.3f	L1	L1	L1FLnI	chr4	86407405	86417547	-	noncoding	MAPK10	polymorphic_pseudogene	SENSE	ENSG00000109339	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q21.3g	L1	L1	L1FLnI	chr4	86449238	86458379	+	noncoding	MAPK10	polymorphic_pseudogene	ANTISENSE	ENSG00000109339	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:86453160-86453170,chr4:86453177-86453223,chr4:86453305-86453314,chr4:86453407-86453429
L1FLnI_4q21.3h	L1	L1	L1FLnI	chr4	86724319	86734434	-	noncoding	PTPN13	protein_coding	ANTISENSE	ENSG00000163629	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:86724727-86724729,chr4:86728678-86728680
L1FLnI_4q21.3i	L1	L1	L1FLnI	chr4	86860354	86869635	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC10A6	ENSG00000145283	10970	AC093827.1	ENSG00000243312	556	None	None
L1FLnI_4q22.1a	L1	L1	L1FLnI	chr4	87346625	87356646	-	coding	HSD17B11	protein_coding	SENSE	ENSG00000198189	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:87354946-87354950
L1FLnI_4q22.1b	L1	L1	L1FLnI	chr4	87482590	87493048	-	coding	SPARCL1	protein_coding	SENSE	ENSG00000152583	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:87490814-87490825,chr4:87490844-87490864
L1FLnI_4q22.1c	L1	L1	L1FLnI	chr4	87706875	87716899	+	coding	AC093895.2	lncRNA	ANTISENSE	ENSG00000249001	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1d	L1	L1	L1FLnI	chr4	87765595	87775731	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093895.1	ENSG00000200024	21542	CHCHD2P7	ENSG00000249973	10189	None	None
L1FLnI_4q22.1e	L1	L1	L1FLnI	chr4	87813150	87823790	-	noncoding	MEPE	protein_coding	ANTISENSE	ENSG00000152595	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:87815705-87815717
L1FLnI_4q22.1f	L1	L1	L1FLnI	chr4	87813536	87823790	-	noncoding	MEPE	protein_coding	ANTISENSE	ENSG00000152595	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:87815705-87815717
L1FLnI_4q22.1g	L1	L1	L1FLnI	chr4	88235527	88244535	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPM1K	ENSG00000163644	13085	ABCG2	ENSG00000118777	3899	None	None
L1FLnI_4q22.1h	L1	L1	L1FLnI	chr4	88535452	88545552	+	noncoding	AC098582.1	protein_coding	SENSE	ENSG00000287542	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1i	L1	L1	L1FLnI	chr4	88866668	88876804	+	coding	FAM13A	protein_coding	ANTISENSE	ENSG00000138640	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1j	L1	L1	L1FLnI	chr4	88876594	88886806	+	noncoding	FAM13A	protein_coding	ANTISENSE	ENSG00000138640	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1k	L1	L1	L1FLnI	chr4	88896198	88905294	+	noncoding	FAM13A	protein_coding	ANTISENSE	ENSG00000138640	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1l	L1	L1	L1FLnI	chr4	88916061	88926203	+	coding	FAM13A	protein_coding	ANTISENSE	ENSG00000138640	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1m	L1	L1	L1FLnI	chr4	89057381	89067210	-	noncoding	FAM13A	protein_coding	SENSE	ENSG00000138640	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1n	L1	L1	L1FLnI	chr4	89057381	89066467	-	noncoding	FAM13A	protein_coding	SENSE	ENSG00000138640	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1o	L1	L1	L1FLnI	chr4	89386655	89395849	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GPRIN3	ENSG00000185477	78855	AC093866.1	ENSG00000251095	15111	None	None
L1FLnI_4q22.1p	L1	L1	L1FLnI	chr4	90152386	90162524	-	coding	CCSER1	protein_coding	ANTISENSE	ENSG00000184305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1q	L1	L1	L1FLnI	chr4	90224110	90234132	+	coding	CCSER1	protein_coding	SENSE	ENSG00000184305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1r	L1	L1	L1FLnI	chr4	90478878	90489023	-	noncoding	CCSER1	protein_coding	ANTISENSE	ENSG00000184305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_4q22.1	L1	L1	L1FLI	chr4	90674714	90682759	-	coding	CCSER1	protein_coding	ANTISENSE	ENSG00000184305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1s	L1	L1	L1FLnI	chr4	90699489	90709561	-	coding	CCSER1	protein_coding	ANTISENSE	ENSG00000184305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1t	L1	L1	L1FLnI	chr4	90708775	90717502	-	noncoding	CCSER1	protein_coding	ANTISENSE	ENSG00000184305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1u	L1	L1	L1FLnI	chr4	90794819	90803616	-	noncoding	CCSER1	protein_coding	ANTISENSE	ENSG00000184305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1v	L1	L1	L1FLnI	chr4	90867554	90876921	-	noncoding	CCSER1	protein_coding	ANTISENSE	ENSG00000184305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1w	L1	L1	L1FLnI	chr4	90907995	90918162	+	coding	CCSER1	protein_coding	SENSE	ENSG00000184305	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1x	L1	L1	L1FLnI	chr4	91074035	91084066	+	noncoding	CCSER1	protein_coding	SENSE	ENSG00000184305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1y	L1	L1	L1FLnI	chr4	91141929	91151218	-	coding	CCSER1	protein_coding	ANTISENSE	ENSG00000184305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1z	L1	L1	L1FLnI	chr4	91147972	91158164	-	coding	CCSER1	protein_coding	ANTISENSE	ENSG00000184305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1aa	L1	L1	L1FLnI	chr4	91147987	91158164	-	coding	CCSER1	protein_coding	ANTISENSE	ENSG00000184305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1ba	L1	L1	L1FLnI	chr4	91159404	91169568	-	noncoding	CCSER1	protein_coding	ANTISENSE	ENSG00000184305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1ca	L1	L1	L1FLnI	chr4	91160267	91169568	-	noncoding	CCSER1	protein_coding	ANTISENSE	ENSG00000184305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1da	L1	L1	L1FLnI	chr4	91174324	91184182	-	noncoding	CCSER1	protein_coding	ANTISENSE	ENSG00000184305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1ea	L1	L1	L1FLnI	chr4	91274622	91284851	-	noncoding	CCSER1	protein_coding	ANTISENSE	ENSG00000184305	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1fa	L1	L1	L1FLnI	chr4	91376263	91386355	-	coding	CCSER1	protein_coding	ANTISENSE	ENSG00000184305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1ga	L1	L1	L1FLnI	chr4	91433993	91444164	+	coding	CCSER1	protein_coding	SENSE	ENSG00000184305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1ha	L1	L1	L1FLnI	chr4	91458876	91469013	+	coding	CCSER1	protein_coding	SENSE	ENSG00000184305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1ia	L1	L1	L1FLnI	chr4	91563385	91572925	-	noncoding	CCSER1	protein_coding	ANTISENSE	ENSG00000184305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.1ja	L1	L1	L1FLnI	chr4	91785528	91795549	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	KRT19P6	ENSG00000249891	89497	AC110774.1	ENSG00000279013	180236	None	None
L1FLnI_4q22.1ka	L1	L1	L1FLnI	chr4	91857850	91867959	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT19P6	ENSG00000249891	17087	AC110774.1	ENSG00000279013	252558	None	None
L1FLnI_4q22.1la	L1	L1	L1FLnI	chr4	91974713	91984913	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093810.1	ENSG00000249052	70378	PMPCAP1	ENSG00000248817	197564	None	None
L1FLnI_4q22.1ma	L1	L1	L1FLnI	chr4	92075188	92085626	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093810.1	ENSG00000249052	170853	PMPCAP1	ENSG00000248817	96851	None	None
L1FLnI_4q22.1na	L1	L1	L1FLnI	chr4	92161011	92169748	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093810.1	ENSG00000249052	256676	PMPCAP1	ENSG00000248817	12729	None	None
L1FLnI_4q22.2a	L1	L1	L1FLnI	chr4	92915867	92925991	-	noncoding	GRID2	protein_coding	ANTISENSE	ENSG00000152208	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.2b	L1	L1	L1FLnI	chr4	92938065	92948194	-	coding	GRID2	protein_coding	ANTISENSE	ENSG00000152208	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.2c	L1	L1	L1FLnI	chr4	92938065	92946800	-	coding	GRID2	protein_coding	ANTISENSE	ENSG00000152208	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.2d	L1	L1	L1FLnI	chr4	93588555	93598580	-	coding	GRID2	protein_coding	ANTISENSE	ENSG00000152208	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.2e	L1	L1	L1FLnI	chr4	93607788	93616972	-	coding	GRID2	protein_coding	ANTISENSE	ENSG00000152208	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.2f	L1	L1	L1FLnI	chr4	93607813	93616972	-	coding	GRID2	protein_coding	ANTISENSE	ENSG00000152208	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_4q22.2	L1	L1	L1FLI	chr4	93637295	93645340	-	coding	GRID2	protein_coding	ANTISENSE	ENSG00000152208	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.2g	L1	L1	L1FLnI	chr4	93673300	93683444	+	coding	GRID2	protein_coding	SENSE	ENSG00000152208	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.2h	L1	L1	L1FLnI	chr4	93705010	93715482	-	noncoding	GRID2	protein_coding	ANTISENSE	ENSG00000152208	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.2i	L1	L1	L1FLnI	chr4	93927259	93936713	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096746.1	ENSG00000246541	181079	ATOH1	ENSG00000172238	96293	None	None
L1FLnI_4q22.2j	L1	L1	L1FLnI	chr4	93927400	93936713	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096746.1	ENSG00000246541	181079	ATOH1	ENSG00000172238	96434	None	None
L1FLnI_4q22.2k	L1	L1	L1FLnI	chr4	94095406	94105547	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ATOH1	ENSG00000172238	264440	AC096746.1	ENSG00000246541	12245	None	None
L1FLnI_4q22.3a	L1	L1	L1FLnI	chr4	94308627	94318791	-	coding	HPGDS,AC109925.2	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000163106,ENSG00000287552	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.3b	L1	L1	L1FLnI	chr4	94319269	94329421	-	coding	HPGDS,AC109925.2	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000163106,ENSG00000287552	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:94326820-94326831,chr4:94326859-94326867
L1FLnI_4q22.3c	L1	L1	L1FLnI	chr4	94835260	94845285	-	coding	BMPR1B	protein_coding	ANTISENSE	ENSG00000138696	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.3d	L1	L1	L1FLnI	chr4	94949117	94957643	-	coding	BMPR1B	protein_coding	ANTISENSE	ENSG00000138696	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.3e	L1	L1	L1FLnI	chr4	95133380	95143564	-	coding	BMPR1B	protein_coding	ANTISENSE	ENSG00000138696	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.3f	L1	L1	L1FLnI	chr4	95170734	95180756	-	coding	UNC5C	protein_coding	SENSE	ENSG00000182168	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.3g	L1	L1	L1FLnI	chr4	95338092	95349102	+	noncoding	UNC5C	protein_coding	ANTISENSE	ENSG00000182168	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.3h	L1	L1	L1FLnI	chr4	95574353	95584433	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL30P6	ENSG00000242936	60519	AC106881.1	ENSG00000271474	21896	None	None
L1FLnI_4q22.3i	L1	L1	L1FLnI	chr4	95660201	95670362	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL30P6	ENSG00000242936	14908	PDHA2	ENSG00000163114	169731	None	None
L1FLnI_4q22.3j	L1	L1	L1FLnI	chr4	95759266	95768368	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL30P6	ENSG00000242936	113973	PDHA2	ENSG00000163114	71725	None	None
L1FLnI_4q22.3k	L1	L1	L1FLnI	chr4	95787906	95798009	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL30P6	ENSG00000242936	142613	PDHA2	ENSG00000163114	42084	None	None
L1FLnI_4q22.3l	L1	L1	L1FLnI	chr4	95911261	95921288	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1059P	ENSG00000200622	42497	RNU6-34P	ENSG00000201744	231009	None	None
L1FLnI_4q22.3m	L1	L1	L1FLnI	chr4	96226427	96236485	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096661.1	ENSG00000250655	13327	LINC02267	ENSG00000248510	74216	None	None
L1FLnI_4q22.3n	L1	L1	L1FLnI	chr4	96227024	96236485	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096661.1	ENSG00000250655	13924	LINC02267	ENSG00000248510	74216	None	None
L1FLnI_4q22.3o	L1	L1	L1FLnI	chr4	96408697	96418725	-	coding	LINC02267	lncRNA	ANTISENSE	ENSG00000248510	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.3p	L1	L1	L1FLnI	chr4	96480287	96488879	-	noncoding	LINC02267	lncRNA	ANTISENSE	ENSG00000248510	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.3q	L1	L1	L1FLnI	chr4	96505486	96514978	+	noncoding	LINC02267	lncRNA	SENSE	ENSG00000248510	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.3r	L1	L1	L1FLnI	chr4	96758220	96768620	-	noncoding	LINC02267	lncRNA	ANTISENSE	ENSG00000248510	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.3s	L1	L1	L1FLnI	chr4	96758248	96768620	-	noncoding	LINC02267	lncRNA	ANTISENSE	ENSG00000248510	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.3t	L1	L1	L1FLnI	chr4	96859038	96869513	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC096585.1	ENSG00000287841	1138	COX7A2P2	ENSG00000236764	33288	None	None
L1FLnI_4q22.3u	L1	L1	L1FLnI	chr4	96943993	96952861	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	COX7A2P2	ENSG00000236764	40943	AC108515.1	ENSG00000253170	167840	None	None
L1FLnI_4q22.3v	L1	L1	L1FLnI	chr4	97333302	97343543	+	noncoding	STPG2,AC034154.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000163116,ENSG00000254044	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.3w	L1	L1	L1FLnI	chr4	97396901	97407311	-	noncoding	STPG2,AC034154.1,STPG2-AS1	protein_coding,lncRNA,lncRNA	SENSE,SENSE,ANTISENSE	ENSG00000163116,ENSG00000254044,ENSG00000251620	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.3x	L1	L1	L1FLnI	chr4	97478806	97487693	+	noncoding	STPG2,AC034154.1,STPG2-AS1	protein_coding,lncRNA,lncRNA	ANTISENSE,ANTISENSE,SENSE	ENSG00000163116,ENSG00000254044,ENSG00000251620	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.3y	L1	L1	L1FLnI	chr4	97478806	97487356	+	noncoding	STPG2,AC034154.1,STPG2-AS1	protein_coding,lncRNA,lncRNA	ANTISENSE,ANTISENSE,SENSE	ENSG00000163116,ENSG00000254044,ENSG00000251620	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.3z	L1	L1	L1FLnI	chr4	97533570	97543629	+	noncoding	STPG2,AC034154.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000163116,ENSG00000254044	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.3aa	L1	L1	L1FLnI	chr4	97560399	97570081	-	coding	STPG2,AC034154.1	protein_coding,lncRNA	SENSE,SENSE	ENSG00000163116,ENSG00000254044	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.3ba	L1	L1	L1FLnI	chr4	97629981	97640003	+	coding	STPG2,AC034154.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000163116,ENSG00000254044	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.3ca	L1	L1	L1FLnI	chr4	97732725	97742874	+	coding	STPG2	protein_coding	ANTISENSE	ENSG00000163116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.3da	L1	L1	L1FLnI	chr4	97774429	97784580	+	noncoding	STPG2	protein_coding	ANTISENSE	ENSG00000163116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.3ea	L1	L1	L1FLnI	chr4	97794700	97804829	-	coding	STPG2	protein_coding	SENSE	ENSG00000163116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q22.3fa	L1	L1	L1FLnI	chr4	97824595	97835013	+	noncoding	STPG2	protein_coding	ANTISENSE	ENSG00000163116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q23a	L1	L1	L1FLnI	chr4	97931860	97942418	-	noncoding	STPG2	protein_coding	SENSE	ENSG00000163116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q23b	L1	L1	L1FLnI	chr4	97945567	97954129	-	noncoding	STPG2	protein_coding	SENSE	ENSG00000163116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q23c	L1	L1	L1FLnI	chr4	98017523	98027643	-	coding	STPG2,RPL5P12	protein_coding,processed_pseudogene	SENSE,ANTISENSE	ENSG00000163116,ENSG00000242697	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q23d	L1	L1	L1FLnI	chr4	98121521	98130196	-	noncoding	STPG2	protein_coding	SENSE	ENSG00000163116	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q23e	L1	L1	L1FLnI	chr4	98317000	98326431	+	coding	RAP1GDS1	protein_coding	SENSE	ENSG00000138698	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q23f	L1	L1	L1FLnI	chr4	98592414	98601963	-	coding	TSPAN5	protein_coding	SENSE	ENSG00000168785	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q23g	L1	L1	L1FLnI	chr4	98719795	98728445	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114811.1	ENSG00000249764	5824	BTF3P13	ENSG00000227118	12297	None	None
L1FLnI_4q23h	L1	L1	L1FLnI	chr4	99093452	99103492	-	coding	AP002026.1	lncRNA	ANTISENSE	ENSG00000246090	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q23i	L1	L1	L1FLnI	chr4	99171133	99179931	-	noncoding	AP002026.1	lncRNA	ANTISENSE	ENSG00000246090	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q23j	L1	L1	L1FLnI	chr4	99241731	99252165	-	noncoding	AP002026.1	lncRNA	ANTISENSE	ENSG00000246090	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q23k	L1	L1	L1FLnI	chr4	99290001	99299901	+	noncoding	AP002026.1,ADH1A	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000246090,ENSG00000187758	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:99290975-99290991
L1FLnI_4q23l	L1	L1	L1FLnI	chr4	99447770	99458915	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001960.1	ENSG00000250300	10683	ADH7	ENSG00000196344	12033	None	None
L1FLnI_4q23m	L1	L1	L1FLnI	chr4	99479649	99488978	-	coding	AP001960.1	unprocessed_pseudogene	SENSE	ENSG00000250300	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q23n	L1	L1	L1FLnI	chr4	99488630	99498775	+	coding	AP001960.1	unprocessed_pseudogene	ANTISENSE	ENSG00000250300	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q23o	L1	L1	L1FLnI	chr4	99667198	99677435	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C4orf54	ENSG00000248713	12550	DAPP1	ENSG00000070190	139392	None	None
L1FLnI_4q23p	L1	L1	L1FLnI	chr4	99695256	99705699	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C4orf54	ENSG00000248713	40608	DAPP1	ENSG00000070190	111128	None	None
L1FLnI_4q23q	L1	L1	L1FLnI	chr4	99695682	99705699	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C4orf54	ENSG00000248713	41034	DAPP1	ENSG00000070190	111128	None	None
L1FLnI_4q23r	L1	L1	L1FLnI	chr4	99764934	99774940	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DAPP1	ENSG00000070190	41887	C4orf54	ENSG00000248713	110286	None	None
L1FLnI_4q23s	L1	L1	L1FLnI	chr4	99792154	99802264	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DAPP1	ENSG00000070190	14563	C4orf54	ENSG00000248713	137506	None	None
L1FLnI_4q23t	L1	L1	L1FLnI	chr4	99967477	99976682	+	noncoding	H2AZ1-DT	lncRNA	SENSE	ENSG00000245322	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q23u	L1	L1	L1FLnI	chr4	100000026	100010053	-	coding	H2AZ1-DT	lncRNA	ANTISENSE	ENSG00000245322	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q23v	L1	L1	L1FLnI	chr4	100043024	100052975	-	coding	H2AZ1-DT	lncRNA	ANTISENSE	ENSG00000245322	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24a	L1	L1	L1FLnI	chr4	100402570	100412452	-	noncoding	EMCN	protein_coding	SENSE	ENSG00000164035	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24b	L1	L1	L1FLnI	chr4	100554400	100564881	+	noncoding	EMCN	protein_coding	ANTISENSE	ENSG00000164035	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24c	L1	L1	L1FLnI	chr4	100631076	100639672	+	noncoding	EMCN	protein_coding	ANTISENSE	ENSG00000164035	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24d	L1	L1	L1FLnI	chr4	100862290	100872430	-	noncoding	EMCN	protein_coding	SENSE	ENSG00000164035	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24e	L1	L1	L1FLnI	chr4	100896662	100907084	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EMCN	ENSG00000164035	16536	PPP3CA	ENSG00000138814	116325	None	None
L1FLnI_4q24f	L1	L1	L1FLnI	chr4	100912871	100925374	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	EMCN	ENSG00000164035	32745	PPP3CA	ENSG00000138814	98035	None	None
L1FLnI_4q24g	L1	L1	L1FLnI	chr4	101405169	101415195	-	coding	BANK1	protein_coding	ANTISENSE	ENSG00000153064	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24h	L1	L1	L1FLnI	chr4	101562408	101571110	+	noncoding	BANK1	protein_coding	SENSE	ENSG00000153064	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24i	L1	L1	L1FLnI	chr4	101738418	101747649	-	coding	BANK1	protein_coding	ANTISENSE	ENSG00000153064	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24j	L1	L1	L1FLnI	chr4	102104872	102113430	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BANK1	ENSG00000153064	30060	SLC39A8	ENSG00000138821	137611	None	None
L1ORF2_4q24	L1	L1	L1ORF2	chr4	102203914	102211960	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC39A8	ENSG00000138821	39081	BANK1	ENSG00000153064	129102	None	None
L1FLnI_4q24k	L1	L1	L1FLnI	chr4	102269157	102279658	+	noncoding	SLC39A8	protein_coding	ANTISENSE	ENSG00000138821	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:102271319-102271339
L1FLnI_4q24l	L1	L1	L1FLnI	chr4	102374231	102384399	-	coding	SLC39A8	protein_coding	SENSE	ENSG00000138821	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24m	L1	L1	L1FLnI	chr4	102474435	102483455	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF213884.2	ENSG00000251572	12283	AF213884.3	ENSG00000260651	17386	None	None
L1FLnI_4q24n	L1	L1	L1FLnI	chr4	102696857	102706134	-	coding	MANBA	protein_coding	SENSE	ENSG00000109323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24o	L1	L1	L1FLnI	chr4	102915938	102926062	+	coding	SLC9B1	protein_coding	ANTISENSE	ENSG00000164037	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24p	L1	L1	L1FLnI	chr4	103183776	103192305	+	coding	CENPE	protein_coding	ANTISENSE	ENSG00000138778	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24q	L1	L1	L1FLnI	chr4	103213541	103224126	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CENPE	ENSG00000138778	15096	LINC02428	ENSG00000248740	31696	None	None
L1FLnI_4q24r	L1	L1	L1FLnI	chr4	103237577	103247722	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02428	ENSG00000248740	8100	CENPE	ENSG00000138778	39132	None	None
L1FLnI_4q24s	L1	L1	L1FLnI	chr4	103249767	103259790	-	coding	LINC02428	lncRNA	ANTISENSE	ENSG00000248740	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24t	L1	L1	L1FLnI	chr4	103381595	103392032	+	coding	LINC02428	lncRNA	SENSE	ENSG00000248740	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24u	L1	L1	L1FLnI	chr4	103381595	103392022	+	coding	LINC02428	lncRNA	SENSE	ENSG00000248740	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24v	L1	L1	L1FLnI	chr4	103480939	103491395	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02428	ENSG00000248740	26272	AC105460.2	ENSG00000251577	57350	None	None
L1FLnI_4q24w	L1	L1	L1FLnI	chr4	103480939	103491387	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02428	ENSG00000248740	26272	AC105460.2	ENSG00000251577	57358	None	None
L1FLnI_4q24x	L1	L1	L1FLnI	chr4	103596959	103606996	-	coding	AC105460.2,TACR3	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000251577,ENSG00000169836	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24y	L1	L1	L1FLnI	chr4	103704027	103714126	+	coding	TACR3	protein_coding	ANTISENSE	ENSG00000169836	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24z	L1	L1	L1FLnI	chr4	103825942	103835475	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC004047.1	ENSG00000286291	36415	TACR3	ENSG00000169836	105957	None	None
L1FLnI_4q24aa	L1	L1	L1FLnI	chr4	103825957	103835475	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC004047.1	ENSG00000286291	36415	TACR3	ENSG00000169836	105972	None	None
L1FLnI_4q24ba	L1	L1	L1FLnI	chr4	104088329	104098723	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02503	ENSG00000249614	50786	AC004052.1	ENSG00000251170	131657	None	None
L1FLnI_4q24ca	L1	L1	L1FLnI	chr4	104244654	104253389	-	noncoding	AC004052.1	lncRNA	ANTISENSE	ENSG00000251170	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24da	L1	L1	L1FLnI	chr4	104249089	104257770	+	noncoding	AC004052.1	lncRNA	SENSE	ENSG00000251170	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24ea	L1	L1	L1FLnI	chr4	104320986	104331128	-	coding	AC004052.1	lncRNA	ANTISENSE	ENSG00000251170	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24fa	L1	L1	L1FLnI	chr4	104561632	104571740	-	noncoding	CXXC4-AS1,AC004063.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000245384,ENSG00000250670	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24ga	L1	L1	L1FLnI	chr4	104611818	104620575	-	noncoding	CXXC4-AS1	lncRNA	ANTISENSE	ENSG00000245384	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24ha	L1	L1	L1FLnI	chr4	104686526	104696401	-	coding	CXXC4-AS1,AC004053.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000245384,ENSG00000248242	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24ia	L1	L1	L1FLnI	chr4	104703063	104713452	+	noncoding	CXXC4-AS1,AC004053.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000245384,ENSG00000248242	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24ja	L1	L1	L1FLnI	chr4	104703063	104713437	+	noncoding	CXXC4-AS1,AC004053.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000245384,ENSG00000248242	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24ka	L1	L1	L1FLnI	chr4	104783490	104793514	+	coding	AC004053.1	lncRNA	ANTISENSE	ENSG00000248242	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24la	L1	L1	L1FLnI	chr4	104926761	104937029	+	coding	AC004053.1,AC096577.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000248242,ENSG00000248373	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24ma	L1	L1	L1FLnI	chr4	104975299	104984157	+	noncoding	AC096577.1	lncRNA	SENSE	ENSG00000248373	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24na	L1	L1	L1FLnI	chr4	105045734	105056431	+	coding	AC096577.1	lncRNA	SENSE	ENSG00000248373	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24oa	L1	L1	L1FLnI	chr4	105293145	105303700	+	noncoding	RN7SL89P	misc_RNA	SENSE	ENSG00000243383	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24pa	L1	L1	L1FLnI	chr4	105306738	105316891	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PPA2	ENSG00000138777	52186	RN7SL89P	ENSG00000243383	12792	None	None
L1FLnI_4q24qa	L1	L1	L1FLnI	chr4	105405433	105413979	+	coding	PPA2,RNU6-553P	protein_coding,snRNA	ANTISENSE,SENSE	ENSG00000138777,ENSG00000200917	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24ra	L1	L1	L1FLnI	chr4	105510747	105519621	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004066.1	ENSG00000216425	6975	EEF1A1P9	ENSG00000249264	24667	None	None
L1FLnI_4q24sa	L1	L1	L1FLnI	chr4	105729245	105739330	-	coding	INTS12,GSTCD	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000138785,ENSG00000138780	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:105735725-105735757
L1FLnI_4q24ta	L1	L1	L1FLnI	chr4	105769874	105780297	-	noncoding	INTS12,GSTCD,GSTCD-AS1	protein_coding,protein_coding,lncRNA	SENSE,ANTISENSE,SENSE	ENSG00000138785,ENSG00000138780,ENSG00000251175	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24ua	L1	L1	L1FLnI	chr4	105856632	105866749	+	noncoding	INTS12	protein_coding	ANTISENSE	ENSG00000138785	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24va	L1	L1	L1FLnI	chr4	105856632	105866760	+	noncoding	INTS12	protein_coding	ANTISENSE	ENSG00000138785	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24wa	L1	L1	L1FLnI	chr4	105876683	105886696	+	noncoding	INTS12	protein_coding	ANTISENSE	ENSG00000138785	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24xa	L1	L1	L1FLnI	chr4	105979944	105988620	-	coding	NPNT	protein_coding	ANTISENSE	ENSG00000168743	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:105987146-105987441	None
L1FLnI_4q24ya	L1	L1	L1FLnI	chr4	106067653	106077749	-	coding	TBCK	protein_coding	SENSE	ENSG00000145348	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24za	L1	L1	L1FLnI	chr4	106079163	106089537	+	noncoding	TBCK	protein_coding	ANTISENSE	ENSG00000145348	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24ab	L1	L1	L1FLnI	chr4	106100222	106110336	+	noncoding	TBCK	protein_coding	ANTISENSE	ENSG00000145348	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24bb	L1	L1	L1FLnI	chr4	106100222	106109508	+	noncoding	TBCK	protein_coding	ANTISENSE	ENSG00000145348	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24cb	L1	L1	L1FLnI	chr4	106209856	106219880	+	coding	TBCK	protein_coding	ANTISENSE	ENSG00000145348	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24db	L1	L1	L1FLnI	chr4	106401969	106412093	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02173	ENSG00000249613	21396	GIMD1	ENSG00000250298	33191	None	None
L1FLnI_4q24eb	L1	L1	L1FLnI	chr4	106465071	106475543	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092445.1	ENSG00000286147	49858	LINC02173	ENSG00000249613	11622	None	None
L1FLnI_4q24fb	L1	L1	L1FLnI	chr4	106534602	106544746	-	coding	AC092445.1	lncRNA	ANTISENSE	ENSG00000286147	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24gb	L1	L1	L1FLnI	chr4	106534618	106544746	-	coding	AC092445.1	lncRNA	ANTISENSE	ENSG00000286147	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24hb	L1	L1	L1FLnI	chr4	106570543	106580570	-	coding	AC092445.1	lncRNA	ANTISENSE	ENSG00000286147	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q24ib	L1	L1	L1FLnI	chr4	106570559	106580570	-	coding	AC092445.1	lncRNA	ANTISENSE	ENSG00000286147	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q25a	L1	L1	L1FLnI	chr4	106931605	106941619	+	coding	AC092445.1,DKK2	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000286147,ENSG00000155011	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q25b	L1	L1	L1FLnI	chr4	106972247	106982525	-	coding	DKK2	protein_coding	SENSE	ENSG00000155011	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:106972191-106972430	chr4:106978786-106978791
L1FLnI_4q25c	L1	L1	L1FLnI	chr4	107094563	107103914	+	noncoding	DKK2	protein_coding	ANTISENSE	ENSG00000155011	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q25d	L1	L1	L1FLnI	chr4	107575520	107585850	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-551P	ENSG00000252470	140300	PAPSS1	ENSG00000138801	4426	None	None
L1FLnI_4q25e	L1	L1	L1FLnI	chr4	107668584	107678699	+	coding	PAPSS1	protein_coding	ANTISENSE	ENSG00000138801	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q25f	L1	L1	L1FLnI	chr4	107953233	107963323	+	noncoding	AC096564.1,CYP2U1	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000245293,ENSG00000155016	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q25g	L1	L1	L1FLnI	chr4	108434922	108445089	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL34-AS1	ENSG00000234492	93101	EXOC7P1	ENSG00000250485	15159	None	None
L1FLnI_4q25h	L1	L1	L1FLnI	chr4	108489736	108499259	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EXOC7P1	ENSG00000250485	69973	RPL34-AS1	ENSG00000234492	38931	None	None
L1FLnI_4q25i	L1	L1	L1FLnI	chr4	108499623	108509736	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EXOC7P1	ENSG00000250485	79860	RPL34-AS1	ENSG00000234492	28454	None	None
L1FLnI_4q25j	L1	L1	L1FLnI	chr4	108990487	109000626	+	coding	COL25A1	protein_coding	ANTISENSE	ENSG00000188517	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q25k	L1	L1	L1FLnI	chr4	109336109	109346218	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	COL25A1-DT	ENSG00000246774	19974	RBMXP4	ENSG00000249465	108	None	None
L1FLnI_4q25l	L1	L1	L1FLnI	chr4	109582075	109591097	-	coding	MCUB	protein_coding	ANTISENSE	ENSG00000005059	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q25m	L1	L1	L1FLnI	chr4	109771547	109781652	+	coding	AC126283.2,CFI	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000285330,ENSG00000205403	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q25n	L1	L1	L1FLnI	chr4	109893801	109903938	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	EGF	ENSG00000138798	8945	KRT19P3	ENSG00000249681	13904	None	None
L1FLnI_4q25o	L1	L1	L1FLnI	chr4	109933846	109943174	-	coding	EGF	protein_coding	ANTISENSE	ENSG00000138798	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q25p	L1	L1	L1FLnI	chr4	110073102	110083255	+	coding	ELOVL6	protein_coding	ANTISENSE	ENSG00000170522	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q25q	L1	L1	L1FLnI	chr4	110321322	110331453	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ENPEP	ENSG00000138792	34280	ZBED1P1	ENSG00000250304	27749	None	None
L1FLnI_4q25r	L1	L1	L1FLnI	chr4	110321337	110331453	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ENPEP	ENSG00000138792	34280	ZBED1P1	ENSG00000250304	27764	None	None
L1FLnI_4q25s	L1	L1	L1FLnI	chr4	110385224	110394530	-	coding	ENPEP	protein_coding	ANTISENSE	ENSG00000138792	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q25t	L1	L1	L1FLnI	chr4	110425698	110436128	-	coding	ENPEP,AC093872.1	protein_coding,snoRNA	ANTISENSE,SENSE	ENSG00000138792,ENSG00000199894	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q25u	L1	L1	L1FLnI	chr4	110686961	110697184	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01438	ENSG00000249519	97219	PITX2	ENSG00000164093	44838	None	None
L1FLnI_4q25v	L1	L1	L1FLnI	chr4	110756984	110767134	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01438	ENSG00000249519	27269	PITX2	ENSG00000164093	114861	None	None
L1FLnI_4q25w	L1	L1	L1FLnI	chr4	110870311	110880321	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LYPLA1P2	ENSG00000251483	64788	MIR297	ENSG00000215961	9664	None	None
L1FLnI_4q25x	L1	L1	L1FLnI	chr4	111049770	111058628	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LYPLA1P2	ENSG00000251483	103971	AC004062.1	ENSG00000251312	4955	None	None
L1FLnI_4q25y	L1	L1	L1FLnI	chr4	111070738	111081198	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004062.1	ENSG00000251312	6511	RNU6-289P	ENSG00000200963	250214	None	None
L1FLnI_4q25z	L1	L1	L1FLnI	chr4	111094145	111104276	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-289P	ENSG00000200963	227136	AC004062.1	ENSG00000251312	29918	None	None
L1FLnI_4q25aa	L1	L1	L1FLnI	chr4	111146547	111156696	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-289P	ENSG00000200963	174716	AC004062.1	ENSG00000251312	82320	None	None
L1FLnI_4q25ba	L1	L1	L1FLnI	chr4	111160230	111170681	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004062.1	ENSG00000251312	96003	RNU6-289P	ENSG00000200963	160731	None	None
L1FLnI_4q25ca	L1	L1	L1FLnI	chr4	111333445	111343446	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-289P	ENSG00000200963	1927	AC083795.1	ENSG00000241722	208408	None	None
L1FLnI_4q25da	L1	L1	L1FLnI	chr4	111333445	111343443	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-289P	ENSG00000200963	1927	AC083795.1	ENSG00000241722	208411	None	None
L1FLnI_4q25ea	L1	L1	L1FLnI	chr4	111374405	111384569	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-289P	ENSG00000200963	42887	AC083795.1	ENSG00000241722	167285	None	None
L1FLnI_4q25fa	L1	L1	L1FLnI	chr4	111408771	111420006	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC083795.1	ENSG00000241722	131848	RNU6-289P	ENSG00000200963	77253	None	None
L1FLnI_4q25ga	L1	L1	L1FLnI	chr4	111561641	111571745	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC083795.1	ENSG00000241722	9468	AC083795.2	ENSG00000248656	60427	None	None
L1FLnI_4q25ha	L1	L1	L1FLnI	chr4	111622248	111632440	-	coding	AC083795.2	lncRNA	ANTISENSE	ENSG00000248656	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q25ia	L1	L1	L1FLnI	chr4	111764471	111773525	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC139718.2	ENSG00000250855	29276	AC083795.2	ENSG00000248656	115509	None	None
L1FLI_4q25	L1	L1	L1FLI	chr4	111893799	111901844	+	coding	AC004704.1	lncRNA	ANTISENSE	ENSG00000249815	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q25ja	L1	L1	L1FLnI	chr4	111972926	111981934	-	noncoding	AC004704.1	lncRNA	SENSE	ENSG00000249815	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q25ka	L1	L1	L1FLnI	chr4	111973176	111981934	-	noncoding	AC004704.1	lncRNA	SENSE	ENSG00000249815	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q25la	L1	L1	L1FLnI	chr4	112082965	112093001	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TUBB8P3	ENSG00000250307	4565	AC093663.1	ENSG00000240459	23509	chr4:112083210-112083540,chr4:112085464-112085647	None
L1FLnI_4q25ma	L1	L1	L1FLnI	chr4	112303277	112313167	-	noncoding	ALPK1	protein_coding	ANTISENSE	ENSG00000073331	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q25na	L1	L1	L1FLnI	chr4	112357773	112367704	+	coding	ALPK1,RTEL1P1	protein_coding,transcribed_processed_pseudogene	SENSE,SENSE	ENSG00000073331,ENSG00000251441	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q25oa	L1	L1	L1FLnI	chr4	112474103	112484195	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NEUROG2	ENSG00000178403	29321	TOX4P1	ENSG00000248697	16318	None	None
L1FLnI_4q25pa	L1	L1	L1FLnI	chr4	112571792	112581939	+	coding	ZGRF1	protein_coding	ANTISENSE	ENSG00000138658	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q25qa	L1	L1	L1FLnI	chr4	112571792	112581969	+	coding	ZGRF1	protein_coding	ANTISENSE	ENSG00000138658	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q26a	L1	L1	L1FLnI	chr4	113424016	113434201	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CAMK2D	ENSG00000145349	16831	RNU1-138P	ENSG00000206820	3530	chr4:113434089-113434471	None
L1FLnI_4q26b	L1	L1	L1FLnI	chr4	113488640	113498667	-	coding	CAMK2D	protein_coding	SENSE	ENSG00000145349	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q26c	L1	L1	L1FLnI	chr4	113848644	113858798	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC111193.1	ENSG00000250229	8408	ARSJ	ENSG00000180801	41486	None	None
L1FLnI_4q26d	L1	L1	L1FLnI	chr4	114006662	114017136	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093815.1	ENSG00000248716	86802	ARSJ	ENSG00000180801	26935	None	None
L1FLnI_4q26e	L1	L1	L1FLnI	chr4	114196330	114205239	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	UGT8	ENSG00000174607	393531	AC093815.1	ENSG00000248716	92105	None	None
L1FLnI_4q26f	L1	L1	L1FLnI	chr4	114248055	114258731	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093815.1	ENSG00000248716	143830	UGT8	ENSG00000174607	340039	None	None
L1FLnI_4q26g	L1	L1	L1FLnI	chr4	114283541	114293670	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093815.1	ENSG00000248716	179316	UGT8	ENSG00000174607	305100	None	None
L1FLnI_4q26h	L1	L1	L1FLnI	chr4	114423710	114433086	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UGT8	ENSG00000174607	165684	AC093815.1	ENSG00000248716	319485	None	None
L1FLnI_4q26i	L1	L1	L1FLnI	chr4	114444908	114454472	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093815.1	ENSG00000248716	340683	UGT8	ENSG00000174607	144298	None	None
L1FLnI_4q26j	L1	L1	L1FLnI	chr4	114576116	114585065	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UGT8	ENSG00000174607	13705	AC093815.1	ENSG00000248716	471891	None	None
L1FLnI_4q26k	L1	L1	L1FLnI	chr4	114774986	114784497	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL808P	ENSG00000240637	14834	CIR1P2	ENSG00000250215	60066	None	None
L1FLnI_4q26l	L1	L1	L1FLnI	chr4	115168967	115178373	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MRPS33P3	ENSG00000251308	25664	RPF2P2	ENSG00000250693	450439	None	None
L1FLnI_4q26m	L1	L1	L1FLnI	chr4	115193237	115202832	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPF2P2	ENSG00000250693	425980	MRPS33P3	ENSG00000251308	49934	None	None
L1FLnI_4q26n	L1	L1	L1FLnI	chr4	115349149	115359646	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPF2P2	ENSG00000250693	269166	MRPS33P3	ENSG00000251308	205846	None	None
L1FLnI_4q26o	L1	L1	L1FLnI	chr4	115383450	115393822	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MRPS33P3	ENSG00000251308	240147	RPF2P2	ENSG00000250693	234990	None	None
L1FLnI_4q26p	L1	L1	L1FLnI	chr4	115446137	115456347	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPF2P2	ENSG00000250693	172465	MRPS33P3	ENSG00000251308	302834	None	None
L1FLnI_4q26q	L1	L1	L1FLnI	chr4	115808177	115818326	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PGAM4P2	ENSG00000248488	43358	KRT18P21	ENSG00000250363	102381	None	None
L1FLnI_4q26r	L1	L1	L1FLnI	chr4	115830465	115840891	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGAM4P2	ENSG00000248488	65646	KRT18P21	ENSG00000250363	79816	None	None
L1FLnI_4q26s	L1	L1	L1FLnI	chr4	115830465	115840898	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGAM4P2	ENSG00000248488	65646	KRT18P21	ENSG00000250363	79809	None	None
L1FLnI_4q26t	L1	L1	L1FLnI	chr4	115847147	115856359	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGAM4P2	ENSG00000248488	82328	KRT18P21	ENSG00000250363	64348	None	None
L1FLnI_4q26u	L1	L1	L1FLnI	chr4	116251417	116261529	-	coding	AC027613.1	transcribed_processed_pseudogene	SENSE	ENSG00000249259	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q26v	L1	L1	L1FLnI	chr4	116270728	116281258	+	noncoding	AC027613.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000249259	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:116273505-116273510
L1FLnI_4q26w	L1	L1	L1FLnI	chr4	116402198	116412231	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TRMT112P1	ENSG00000250272	22929	CUL4AP1	ENSG00000248139	13752	None	None
L1FLnI_4q26x	L1	L1	L1FLnI	chr4	116774545	116784555	-	noncoding	AC093765.3,AC093765.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000287290,ENSG00000286637	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q26y	L1	L1	L1FLnI	chr4	116811318	116821711	+	coding	AC093765.3,AC093765.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000287290,ENSG00000286637	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q26z	L1	L1	L1FLnI	chr4	117441765	117450530	-	noncoding	LINC01378	lncRNA	ANTISENSE	ENSG00000236922	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q26aa	L1	L1	L1FLnI	chr4	117679659	117688774	-	coding	LINC01378	lncRNA	ANTISENSE	ENSG00000236922	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q26ba	L1	L1	L1FLnI	chr4	117687685	117697325	+	noncoding	LINC01378	lncRNA	SENSE	ENSG00000236922	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q26ca	L1	L1	L1FLnI	chr4	117847632	117856438	+	noncoding	LINC02264	lncRNA	SENSE	ENSG00000229565	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q26da	L1	L1	L1FLnI	chr4	117847673	117856438	+	noncoding	LINC02264	lncRNA	SENSE	ENSG00000229565	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q26ea	L1	L1	L1FLnI	chr4	117908827	117917706	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDST3	ENSG00000164100	115912	LINC02264	ENSG00000229565	38867	None	None
L1FLnI_4q26fa	L1	L1	L1FLnI	chr4	117918485	117928496	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02264	ENSG00000229565	48525	NDST3	ENSG00000164100	105122	None	None
L1FLnI_4q26ga	L1	L1	L1FLnI	chr4	117918485	117928486	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02264	ENSG00000229565	48525	NDST3	ENSG00000164100	105132	None	None
L1FLnI_4q26ha	L1	L1	L1FLnI	chr4	117935351	117945737	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NDST3	ENSG00000164100	87881	LINC02264	ENSG00000229565	65391	None	None
L1FLnI_4q26ia	L1	L1	L1FLnI	chr4	117974305	117983189	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02264	ENSG00000229565	104345	NDST3	ENSG00000164100	50429	None	None
L1FLnI_4q26ja	L1	L1	L1FLnI	chr4	118042460	118052121	+	noncoding	NDST3	protein_coding	SENSE	ENSG00000164100	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q26ka	L1	L1	L1FLnI	chr4	118125669	118137160	-	coding	NDST3	protein_coding	ANTISENSE	ENSG00000164100	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q26la	L1	L1	L1FLnI	chr4	118126056	118134750	-	coding	NDST3	protein_coding	ANTISENSE	ENSG00000164100	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q26ma	L1	L1	L1FLnI	chr4	118161012	118169630	+	coding	NDST3	protein_coding	SENSE	ENSG00000164100	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q26na	L1	L1	L1FLnI	chr4	118400204	118410337	+	coding	NDUFS5P5	processed_pseudogene	ANTISENSE	ENSG00000230671	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q26oa	L1	L1	L1FLnI	chr4	118776594	118786742	-	noncoding	SEC24D	protein_coding	SENSE	ENSG00000150961	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q26pa	L1	L1	L1FLnI	chr4	118776617	118786742	-	noncoding	SEC24D	protein_coding	SENSE	ENSG00000150961	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q26qa	L1	L1	L1FLnI	chr4	119061403	119071562	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MYOZ2	ENSG00000172399	64222	SYNPO2	ENSG00000172403	156	None	None
L1FLnI_4q26ra	L1	L1	L1FLnI	chr4	119070140	119080286	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SYNPO2	ENSG00000172403	8893	MYOZ2	ENSG00000172399	55498	None	None
L1FLnI_4q26sa	L1	L1	L1FLnI	chr4	119194188	119203654	+	noncoding	AC092656.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000178636	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q26ta	L1	L1	L1FLnI	chr4	119273601	119283627	-	coding	USP53	protein_coding	ANTISENSE	ENSG00000145390	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q26ua	L1	L1	L1FLnI	chr4	119273615	119283627	-	coding	USP53	protein_coding	ANTISENSE	ENSG00000145390	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q26va	L1	L1	L1FLnI	chr4	119380444	119389754	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC110373.1	ENSG00000249244	2077	KLHL2P1	ENSG00000250412	2211	None	None
L1FLnI_4q26wa	L1	L1	L1FLnI	chr4	119479417	119488188	+	noncoding	AC093752.1	transcribed_unprocessed_pseudogene	SENSE	ENSG00000245958	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q26xa	L1	L1	L1FLnI	chr4	119571449	119580352	+	coding	PDE5A	protein_coding	ANTISENSE	ENSG00000138735	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:119572060-119572142	None
L1FLnI_4q26ya	L1	L1	L1FLnI	chr4	119711929	119722278	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC080089.2	ENSG00000286241	18366	LINC01365	ENSG00000250772	76811	None	None
L1FLnI_4q27a	L1	L1	L1FLnI	chr4	119912440	119921149	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01365	ENSG00000250772	107886	AC097173.2	ENSG00000250183	16408	None	None
L1FLnI_4q27b	L1	L1	L1FLnI	chr4	119948228	119958258	-	coding	AC097173.2,LINC02502	transcribed_unprocessed_pseudogene,lncRNA	ANTISENSE,ANTISENSE	ENSG00000250183,ENSG00000250392	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q27c	L1	L1	L1FLnI	chr4	120012139	120020666	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC097173.3	ENSG00000253825	14367	LINC02502	ENSG00000250392	47846	None	None
L1FLnI_4q27d	L1	L1	L1FLnI	chr4	120250237	120260278	-	coding	AC073475.1	lncRNA	ANTISENSE	ENSG00000250938	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q27e	L1	L1	L1FLnI	chr4	120402427	120413238	+	noncoding	AC073475.1	lncRNA	SENSE	ENSG00000250938	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q27f	L1	L1	L1FLnI	chr4	120404115	120413238	+	noncoding	AC073475.1	lncRNA	SENSE	ENSG00000250938	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q27g	L1	L1	L1FLnI	chr4	120505315	120515750	+	noncoding	AC073475.1	lncRNA	SENSE	ENSG00000250938	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q27h	L1	L1	L1FLnI	chr4	120669308	120680979	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025741.1	ENSG00000249409	18512	PRDM5	ENSG00000138738	3940	None	None
L1ORF2_4q27a	L1	L1	L1ORF2	chr4	120740413	120748461	+	coding	PRDM5	protein_coding	ANTISENSE	ENSG00000138738	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q27i	L1	L1	L1FLnI	chr4	120798913	120808040	+	coding	PRDM5	protein_coding	ANTISENSE	ENSG00000138738	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q27j	L1	L1	L1FLnI	chr4	120984230	120994656	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDNF	ENSG00000173376	40957	PRDM5	ENSG00000138738	61360	None	None
L1FLnI_4q27k	L1	L1	L1FLnI	chr4	120995564	121005650	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDNF	ENSG00000173376	29963	PRDM5	ENSG00000138738	72694	None	None
L1FLnI_4q27l	L1	L1	L1FLnI	chr4	121281318	121291423	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TNIP3	ENSG00000050730	53852	QRFPR	ENSG00000186867	37219	None	None
L1FLnI_4q27m	L1	L1	L1FLnI	chr4	121406521	121415693	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUBB4BP5	ENSG00000224062	35848	QRFPR	ENSG00000186867	25462	None	None
L1FLnI_4q27n	L1	L1	L1FLnI	chr4	121412792	121423144	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUBB4BP5	ENSG00000224062	28397	QRFPR	ENSG00000186867	31733	None	None
L1FLnI_4q27o	L1	L1	L1FLnI	chr4	121413193	121423144	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUBB4BP5	ENSG00000224062	28397	QRFPR	ENSG00000186867	32134	None	None
L1FLnI_4q27p	L1	L1	L1FLnI	chr4	121544198	121554314	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ANXA5	ENSG00000164111	113632	TUBB4BP5	ENSG00000224062	92231	None	None
L1FLnI_4q27q	L1	L1	L1FLnI	chr4	121563710	121573966	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TUBB4BP5	ENSG00000224062	111743	ANXA5	ENSG00000164111	93980	chr4:121566483-121566573	None
L1FLnI_4q27r	L1	L1	L1FLnI	chr4	121612733	121622878	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TUBB4BP5	ENSG00000224062	160766	ANXA5	ENSG00000164111	45068	None	None
L1FLnI_4q27s	L1	L1	L1FLnI	chr4	122028194	122037418	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097533.1	ENSG00000237868	40422	TRPC3	ENSG00000138741	76134	None	None
L1FLnI_4q27t	L1	L1	L1FLnI	chr4	122106608	122116618	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL335P	ENSG00000241037	18797	KIAA1109	ENSG00000138688	35715	None	None
L1FLnI_4q27u	L1	L1	L1FLnI	chr4	122361214	122370828	+	coding	KIAA1109	protein_coding	SENSE	ENSG00000138688	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q27v	L1	L1	L1FLnI	chr4	122397505	122408217	-	noncoding	ADAD1	protein_coding	ANTISENSE	ENSG00000164113	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q27w	L1	L1	L1FLnI	chr4	122397849	122408217	-	noncoding	ADAD1	protein_coding	ANTISENSE	ENSG00000164113	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q27x	L1	L1	L1FLnI	chr4	122459277	122469495	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IL21	ENSG00000138684	140613	IL2	ENSG00000109471	2552	None	None
L1FLnI_4q27y	L1	L1	L1FLnI	chr4	122490726	122499568	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	IL2	ENSG00000109471	34001	IL21	ENSG00000138684	110540	None	None
L1FLnI_4q27z	L1	L1	L1FLnI	chr4	122568679	122578828	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	IL21	ENSG00000138684	31280	IL2	ENSG00000109471	111954	None	None
L1ORF2_4q27b	L1	L1	L1ORF2	chr4	122651646	122659695	-	coding	IL21-AS1	lncRNA	ANTISENSE	ENSG00000227145	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.1a	L1	L1	L1FLnI	chr4	122939135	122949296	-	coding	SPATA5	protein_coding	ANTISENSE	ENSG00000145375	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.1b	L1	L1	L1FLnI	chr4	122997815	123007960	-	coding	SPATA5	protein_coding	ANTISENSE	ENSG00000145375	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.1c	L1	L1	L1FLnI	chr4	123234204	123244239	+	coding	SPATA5	protein_coding	SENSE	ENSG00000145375	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.1d	L1	L1	L1FLnI	chr4	123330163	123340652	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC026402.2	ENSG00000287951	8598	SPATA5	ENSG00000145375	10730	None	None
L1FLnI_4q28.1e	L1	L1	L1FLnI	chr4	123632779	123642576	-	noncoding	LINC01091	lncRNA	ANTISENSE	ENSG00000249464	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.1f	L1	L1	L1FLnI	chr4	123710556	123719711	+	noncoding	LINC01091	lncRNA	SENSE	ENSG00000249464	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.1g	L1	L1	L1FLnI	chr4	123717886	123728041	+	coding	LINC01091	lncRNA	SENSE	ENSG00000249464	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.1h	L1	L1	L1FLnI	chr4	124007888	124018041	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108075.1	ENSG00000286700	7254	LINC01091	ENSG00000249464	45190	None	None
L1FLnI_4q28.1i	L1	L1	L1FLnI	chr4	124039137	124049472	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP76	ENSG00000250484	12990	AC108075.1	ENSG00000286700	10869	None	None
L1FLnI_4q28.1j	L1	L1	L1FLnI	chr4	124069006	124079221	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP76	ENSG00000250484	6016	AC121154.1	ENSG00000249837	70156	None	None
L1FLnI_4q28.1k	L1	L1	L1FLnI	chr4	124070051	124079221	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP76	ENSG00000250484	7061	AC121154.1	ENSG00000249837	70156	None	None
L1FLnI_4q28.1l	L1	L1	L1FLnI	chr4	124125327	124135463	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC121154.1	ENSG00000249837	13914	PPIAP76	ENSG00000250484	62337	None	None
L1FLnI_4q28.1m	L1	L1	L1FLnI	chr4	124163864	124173799	+	noncoding	AC121154.1	lncRNA	ANTISENSE	ENSG00000249837	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.1n	L1	L1	L1FLnI	chr4	124268875	124278481	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC133530.1	ENSG00000286734	46492	AC121154.1	ENSG00000249837	16831	None	None
L1FLnI_4q28.1o	L1	L1	L1FLnI	chr4	124357749	124367893	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC133530.1	ENSG00000286734	18702	AC097474.1	ENSG00000248506	67857	None	None
L1FLnI_4q28.1p	L1	L1	L1FLnI	chr4	124367475	124378464	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097474.1	ENSG00000248506	57286	AC133530.1	ENSG00000286734	28428	None	None
L1FLnI_4q28.1q	L1	L1	L1FLnI	chr4	124438812	124449234	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TECRP2	ENSG00000248565	13629	AC097474.1	ENSG00000248506	1692	None	None
L1FLnI_4q28.1r	L1	L1	L1FLnI	chr4	124440719	124449234	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TECRP2	ENSG00000248565	13629	AC097474.1	ENSG00000248506	3599	None	None
L1FLnI_4q28.1s	L1	L1	L1FLnI	chr4	124579340	124588441	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02516	ENSG00000261083	20895	ANKRD50	ENSG00000151458	75607	None	None
L1FLnI_4q28.1t	L1	L1	L1FLnI	chr4	124611439	124621585	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ANKRD50	ENSG00000151458	42463	LINC02516	ENSG00000261083	52994	None	None
L1FLnI_4q28.1u	L1	L1	L1FLnI	chr4	126027934	126036601	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104664.1	ENSG00000250149	10577	LINC02379	ENSG00000251649	27527	None	None
L1FLnI_4q28.1v	L1	L1	L1FLnI	chr4	126113204	126123399	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097528.1	ENSG00000286251	308295	H3P15	ENSG00000251005	6281	None	None
L1FLnI_4q28.1w	L1	L1	L1FLnI	chr4	126401271	126409831	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	H3P15	ENSG00000251005	294348	AC097528.1	ENSG00000286251	21863	None	None
L1FLnI_4q28.1x	L1	L1	L1FLnI	chr4	126495702	126504410	+	coding	AC097528.1	lncRNA	ANTISENSE	ENSG00000286251	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.1y	L1	L1	L1FLnI	chr4	126666247	126676224	+	noncoding	AC097528.1	lncRNA	ANTISENSE	ENSG00000286251	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.1z	L1	L1	L1FLnI	chr4	126860358	126870500	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC097378.1	ENSG00000199862	157607	AC097528.1	ENSG00000286251	124835	None	None
L1FLnI_4q28.1aa	L1	L1	L1FLnI	chr4	126924757	126934784	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC097528.1	ENSG00000286251	189234	AC097378.1	ENSG00000199862	93323	None	None
L1FLnI_4q28.1ba	L1	L1	L1FLnI	chr4	127017070	127027026	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC097528.1	ENSG00000286251	281547	AC097378.1	ENSG00000199862	1081	None	None
L1FLnI_4q28.1ca	L1	L1	L1FLnI	chr4	127062062	127072103	-	coding	AC096773.1	lncRNA	SENSE	ENSG00000250945	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.1da	L1	L1	L1FLnI	chr4	127085106	127094801	+	noncoding	AC093772.1	lncRNA	ANTISENSE	ENSG00000248491	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:127088243-127088246
L1FLnI_4q28.1ea	L1	L1	L1FLnI	chr4	127102367	127112347	+	noncoding	AC093772.1	lncRNA	ANTISENSE	ENSG00000248491	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.1fa	L1	L1	L1FLnI	chr4	127293680	127303032	+	noncoding	AC093772.1,AC093772.2	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000248491,ENSG00000287101	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.1ga	L1	L1	L1FLnI	chr4	127457640	127468112	-	noncoding	AC093772.1	lncRNA	SENSE	ENSG00000248491	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.1ha	L1	L1	L1FLnI	chr4	127470167	127479329	+	coding	AC093772.1	lncRNA	ANTISENSE	ENSG00000248491	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.1ia	L1	L1	L1FLnI	chr4	127585432	127595462	+	coding	AC097462.3	lncRNA	ANTISENSE	ENSG00000287021	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.1ja	L1	L1	L1FLnI	chr4	127649722	127659745	-	coding	INTU	protein_coding	ANTISENSE	ENSG00000164066	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.1ka	L1	L1	L1FLnI	chr4	127673110	127683256	+	coding	INTU	protein_coding	SENSE	ENSG00000164066	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.1la	L1	L1	L1FLnI	chr4	127716489	127726869	-	noncoding	INTU	protein_coding	ANTISENSE	ENSG00000164066	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.1ma	L1	L1	L1FLnI	chr4	127856654	127866187	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093591.2	ENSG00000261668	12614	PLK4	ENSG00000142731	14706	None	None
L1FLnI_4q28.1na	L1	L1	L1FLnI	chr4	127899257	127909123	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MFSD8	ENSG00000164073	8609	PLK4	ENSG00000142731	33	None	None
L1FLnI_4q28.2a	L1	L1	L1FLnI	chr4	128210291	128220307	+	coding	LARP1B	protein_coding	SENSE	ENSG00000138709	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.2b	L1	L1	L1FLnI	chr4	128210291	128220332	+	coding	LARP1B	protein_coding	SENSE	ENSG00000138709	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.2c	L1	L1	L1FLnI	chr4	128397569	128406942	-	noncoding	LINC02615	lncRNA	ANTISENSE	ENSG00000251432	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.2d	L1	L1	L1FLnI	chr4	128410405	128419158	-	noncoding	LINC02615	lncRNA	ANTISENSE	ENSG00000251432	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.2e	L1	L1	L1FLnI	chr4	128431008	128441143	-	coding	LINC02615	lncRNA	ANTISENSE	ENSG00000251432	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.2f	L1	L1	L1FLnI	chr4	128529395	128539840	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC110609.1	ENSG00000273077	12750	LINC02615	ENSG00000251432	9997	None	None
L1FLnI_4q28.2g	L1	L1	L1FLnI	chr4	128892053	128902181	+	coding	SCLT1	protein_coding	ANTISENSE	ENSG00000151466	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.2h	L1	L1	L1FLnI	chr4	128982414	128992227	+	noncoding	SCLT1	protein_coding	ANTISENSE	ENSG00000151466	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.2i	L1	L1	L1FLnI	chr4	129020049	129030191	+	coding	SCLT1	protein_coding	ANTISENSE	ENSG00000151466	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.2j	L1	L1	L1FLnI	chr4	129049223	129059742	-	noncoding	SCLT1	protein_coding	SENSE	ENSG00000151466	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.2k	L1	L1	L1FLnI	chr4	129049223	129059334	-	noncoding	SCLT1	protein_coding	SENSE	ENSG00000151466	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.2l	L1	L1	L1FLnI	chr4	129067726	129076684	-	noncoding	SCLT1	protein_coding	SENSE	ENSG00000151466	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.2m	L1	L1	L1FLnI	chr4	129120673	129130476	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093826.1	ENSG00000251345	2630	C4orf33	ENSG00000151470	4033	None	None
L1FLnI_4q28.2n	L1	L1	L1FLnI	chr4	129286607	129296129	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC082650.1	ENSG00000250193	3046	AC105417.1	ENSG00000251195	107513	None	None
L1FLnI_4q28.2o	L1	L1	L1FLnI	chr4	129442441	129452732	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC082650.2	ENSG00000287748	64937	LINC02466	ENSG00000246876	159598	None	None
L1FLnI_4q28.2p	L1	L1	L1FLnI	chr4	129469808	129479791	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02466	ENSG00000246876	132539	AC082650.2	ENSG00000287748	92304	None	None
L1FLnI_4q28.2q	L1	L1	L1FLnI	chr4	129647753	129658163	+	noncoding	LINC02466	lncRNA	ANTISENSE	ENSG00000246876	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.2r	L1	L1	L1FLnI	chr4	129715001	129725126	-	coding	LINC02466	lncRNA	SENSE	ENSG00000246876	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.2s	L1	L1	L1FLnI	chr4	129850407	129860430	+	coding	LINC02465	lncRNA	SENSE	ENSG00000249618	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.2t	L1	L1	L1FLnI	chr4	129870240	129880382	-	coding	LINC02465	lncRNA	ANTISENSE	ENSG00000249618	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.2u	L1	L1	L1FLnI	chr4	129942564	129951948	-	coding	LINC02465	lncRNA	ANTISENSE	ENSG00000249618	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.2v	L1	L1	L1FLnI	chr4	130045704	130055842	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02479	ENSG00000251326	320387	LINC02465	ENSG00000249618	70375	None	chr4:130055175-130055179
L1FLnI_4q28.3a	L1	L1	L1FLnI	chr4	130436322	130446519	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGBD4P4	ENSG00000248877	48154	LINC02479	ENSG00000251326	4095	None	None
L1FLnI_4q28.3b	L1	L1	L1FLnI	chr4	130550794	130559461	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP56	ENSG00000249018	46450	AC093831.2	ENSG00000280059	249046	None	None
L1FLnI_4q28.3c	L1	L1	L1FLnI	chr4	130647490	130657039	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP56	ENSG00000249018	143146	AC093831.2	ENSG00000280059	151468	None	None
L1FLnI_4q28.3d	L1	L1	L1FLnI	chr4	131315028	131324160	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02377	ENSG00000250102	55557	RNU6-224P	ENSG00000206782	41680	None	None
L1FLnI_4q28.3e	L1	L1	L1FLnI	chr4	131348895	131358909	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-224P	ENSG00000206782	75547	LINC02377	ENSG00000250102	20808	None	None
L1FLnI_4q28.3f	L1	L1	L1FLnI	chr4	131397156	131407505	-	noncoding	LINC02377	lncRNA	ANTISENSE	ENSG00000250102	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.3g	L1	L1	L1FLnI	chr4	131436179	131445265	-	noncoding	LINC02377	lncRNA	ANTISENSE	ENSG00000250102	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.3h	L1	L1	L1FLnI	chr4	131631524	131643128	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02377	ENSG00000250102	39699	RN7SL205P	ENSG00000241392	77132	None	None
L1FLnI_4q28.3i	L1	L1	L1FLnI	chr4	131631524	131641026	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02377	ENSG00000250102	39699	RN7SL205P	ENSG00000241392	79234	None	None
L1FLnI_4q28.3j	L1	L1	L1FLnI	chr4	131812440	131821152	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7AP28	ENSG00000184139	36191	SNHG27	ENSG00000251676	20948	None	None
L1FLnI_4q28.3k	L1	L1	L1FLnI	chr4	132163428	132173814	-	noncoding	AC093916.1	lncRNA	SENSE	ENSG00000251598	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.3l	L1	L1	L1FLnI	chr4	132252082	132260645	+	coding	AC093916.1	lncRNA	ANTISENSE	ENSG00000251598	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.3m	L1	L1	L1FLnI	chr4	132398440	132407768	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114741.1	ENSG00000248369	28034	ELL2P2	ENSG00000251051	29961	None	None
L1FLnI_4q28.3n	L1	L1	L1FLnI	chr4	132398454	132407768	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114741.1	ENSG00000248369	28034	ELL2P2	ENSG00000251051	29975	None	None
L1FLnI_4q28.3o	L1	L1	L1FLnI	chr4	132442740	132453604	+	noncoding	AC114741.1	lncRNA	ANTISENSE	ENSG00000248369	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.3p	L1	L1	L1FLnI	chr4	132454299	132464388	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC114741.1	ENSG00000248369	7064	LINC01256	ENSG00000251398	126676	None	None
L1FLnI_4q28.3q	L1	L1	L1FLnI	chr4	132454299	132464387	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC114741.1	ENSG00000248369	7064	LINC01256	ENSG00000251398	126677	None	None
L1FLnI_4q28.3r	L1	L1	L1FLnI	chr4	132569153	132578436	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114741.1	ENSG00000248369	121918	LINC01256	ENSG00000251398	12628	None	None
L1FLnI_4q28.3s	L1	L1	L1FLnI	chr4	132630788	132640804	-	coding	LINC01256	lncRNA	ANTISENSE	ENSG00000251398	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.3t	L1	L1	L1FLnI	chr4	132940947	132950933	+	coding	AC115622.1	lncRNA	ANTISENSE	ENSG00000251488	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.3u	L1	L1	L1FLnI	chr4	133019153	133028697	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC110751.1	ENSG00000249513	30476	AC105383.1	ENSG00000250241	46614	None	None
L1FLnI_4q28.3v	L1	L1	L1FLnI	chr4	133501746	133511552	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108052.1	ENSG00000286467	238631	AC105252.1	ENSG00000250191	63014	None	None
L1FLnI_4q28.3w	L1	L1	L1FLnI	chr4	133684680	133694533	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079380.1	ENSG00000251388	176713	AC105252.1	ENSG00000250191	109472	None	None
L1FLnI_4q28.3x	L1	L1	L1FLnI	chr4	133733444	133743452	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC079380.1	ENSG00000251388	127794	AC105252.1	ENSG00000250191	158236	None	None
L1FLnI_4q28.3y	L1	L1	L1FLnI	chr4	133808329	133819066	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105252.1	ENSG00000250191	233121	AC079380.1	ENSG00000251388	52180	None	None
L1FLnI_4q28.3z	L1	L1	L1FLnI	chr4	133904468	133913395	-	noncoding	AC079380.1	lncRNA	SENSE	ENSG00000251388	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.3aa	L1	L1	L1FLnI	chr4	134173975	134184148	+	coding	AC015631.1	lncRNA	ANTISENSE	ENSG00000251199	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.3ba	L1	L1	L1FLnI	chr4	134204280	134214427	+	coding	AC015631.1	lncRNA	ANTISENSE	ENSG00000251199	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.3ca	L1	L1	L1FLnI	chr4	134436646	134446780	-	coding	LINC02462	lncRNA	ANTISENSE	ENSG00000251291	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.3da	L1	L1	L1FLnI	chr4	134683054	134692239	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093722.1	ENSG00000249000	67160	LINC02462	ENSG00000251291	137406	chr4:134685320-134685567,chr4:134691992-134692302	None
L1FLnI_4q28.3ea	L1	L1	L1FLnI	chr4	134826164	134836294	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093722.1	ENSG00000249000	8875	AC104619.2	ENSG00000249847	96595	None	None
L1FLnI_4q28.3fa	L1	L1	L1FLnI	chr4	134922520	134932706	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104619.2	ENSG00000249847	183	AC093722.1	ENSG00000249000	105231	None	None
L1FLnI_4q28.3ga	L1	L1	L1FLnI	chr4	135073956	135082582	-	coding	AC107463.1	lncRNA	ANTISENSE	ENSG00000248434	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.3ha	L1	L1	L1FLnI	chr4	135177642	135187247	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108867.1	ENSG00000283432	128171	LINC02485	ENSG00000248456	53863	None	None
L1FLnI_4q28.3ia	L1	L1	L1FLnI	chr4	135340240	135351318	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108867.1	ENSG00000283432	24718	KRT18P54	ENSG00000250834	19859	None	None
L1FLnI_4q28.3ja	L1	L1	L1FLnI	chr4	135374362	135384791	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TARS2P1	ENSG00000248104	180326	KRT18P54	ENSG00000250834	2438	None	None
L1FLnI_4q28.3ka	L1	L1	L1FLnI	chr4	135444039	135454051	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	KRT18P54	ENSG00000250834	72115	TARS2P1	ENSG00000248104	111066	None	None
L1FLnI_4q28.3la	L1	L1	L1FLnI	chr4	135467476	135477923	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TARS2P1	ENSG00000248104	87194	KRT18P54	ENSG00000250834	95552	None	None
L1FLnI_4q28.3ma	L1	L1	L1FLnI	chr4	135627271	135636332	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105362.1	ENSG00000250865	156052	TARS2P1	ENSG00000248104	60114	None	None
L1FLnI_4q28.3na	L1	L1	L1FLnI	chr4	136214414	136224401	-	coding	AC018680.1	lncRNA	SENSE	ENSG00000251567	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.3oa	L1	L1	L1FLnI	chr4	136256587	136265373	+	noncoding	AC018680.1	lncRNA	ANTISENSE	ENSG00000251567	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_4q28.3	L1	L1	L1FLI	chr4	136292504	136300550	-	coding	AC018680.1	lncRNA	SENSE	ENSG00000251567	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.3pa	L1	L1	L1FLnI	chr4	136332616	136341884	+	noncoding	AC018680.1	lncRNA	ANTISENSE	ENSG00000251567	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.3qa	L1	L1	L1FLnI	chr4	136842299	136852914	-	coding	LINC02511	lncRNA	SENSE	ENSG00000248869	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.3ra	L1	L1	L1FLnI	chr4	136993044	137003430	-	noncoding	LINC02511	lncRNA	SENSE	ENSG00000248869	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.3sa	L1	L1	L1FLnI	chr4	137347082	137357555	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERF1AP1	ENSG00000250813	45895	STMN1P2	ENSG00000251440	67871	None	None
L1FLnI_4q28.3ta	L1	L1	L1FLnI	chr4	137492780	137502788	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS23P2	ENSG00000213448	44279	PCDH18	ENSG00000189184	16130	chr4:137502410-137502791	chr4:137493311-137493314
L1FLnI_4q28.3ua	L1	L1	L1FLnI	chr4	137566644	137577018	-	noncoding	LINC02172	lncRNA	ANTISENSE	ENSG00000251632	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.3va	L1	L1	L1FLnI	chr4	137566644	137575772	-	noncoding	LINC02172	lncRNA	ANTISENSE	ENSG00000251632	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q28.3wa	L1	L1	L1FLnI	chr4	137780162	137790303	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC131956.3	ENSG00000287441	24862	AC131956.1	ENSG00000250034	17403	None	None
L1FLnI_4q28.3xa	L1	L1	L1FLnI	chr4	138351277	138361394	+	noncoding	LINC00499	lncRNA	SENSE	ENSG00000251372	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.1a	L1	L1	L1FLnI	chr4	138517969	138528121	+	noncoding	LINC00499	lncRNA	SENSE	ENSG00000251372	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr4:138526135-138526237	None
L1ORF2_4q31.1	L1	L1	L1ORF2	chr4	138545019	138553068	+	coding	LINC00499	lncRNA	SENSE	ENSG00000251372	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.1b	L1	L1	L1FLnI	chr4	138779172	138789136	-	noncoding	AC093766.1	lncRNA	ANTISENSE	ENSG00000250501	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.1c	L1	L1	L1FLnI	chr4	138779172	138789200	-	noncoding	AC093766.1	lncRNA	ANTISENSE	ENSG00000250501	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.1d	L1	L1	L1FLnI	chr4	138880780	138890939	-	coding	AC109927.1	lncRNA	SENSE	ENSG00000250195	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.1e	L1	L1	L1FLnI	chr4	140409844	140419863	+	coding	CLGN	protein_coding	ANTISENSE	ENSG00000153132	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.1f	L1	L1	L1FLnI	chr4	140504702	140514766	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093671.1	ENSG00000280262	3372	ELMOD2	ENSG00000179387	9402	None	None
L1FLnI_4q31.21a	L1	L1	L1FLnI	chr4	140782182	140792347	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNF150	ENSG00000170153	67460	AC096733.1	ENSG00000222613	3041	chr4:140790942-140791153	None
L1FLnI_4q31.21b	L1	L1	L1FLnI	chr4	140819872	140829994	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNF150	ENSG00000170153	29813	AC096733.1	ENSG00000222613	40731	None	None
L1FLnI_4q31.21c	L1	L1	L1FLnI	chr4	140912163	140921688	+	coding	RNF150	protein_coding	ANTISENSE	ENSG00000170153	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21d	L1	L1	L1FLnI	chr4	140912163	140921675	+	coding	RNF150	protein_coding	ANTISENSE	ENSG00000170153	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21e	L1	L1	L1FLnI	chr4	141159019	141169448	+	noncoding	RNF150	protein_coding	ANTISENSE	ENSG00000170153	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21f	L1	L1	L1FLnI	chr4	141254914	141266418	+	noncoding	AC107220.1	lncRNA	ANTISENSE	ENSG00000248747	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21g	L1	L1	L1FLnI	chr4	141374283	141384425	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02432	ENSG00000248810	17187	AC097504.1	ENSG00000250189	20747	None	None
L1FLnI_4q31.21h	L1	L1	L1FLnI	chr4	141504148	141513560	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02276	ENSG00000250141	56371	AC097504.2	ENSG00000272632	72864	None	None
L1FLnI_4q31.21i	L1	L1	L1FLnI	chr4	141545791	141555944	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC097504.2	ENSG00000272632	114507	LINC02276	ENSG00000250141	13987	None	None
L1FLnI_4q31.21j	L1	L1	L1FLnI	chr4	141703258	141712368	-	coding	IL15	protein_coding	ANTISENSE	ENSG00000164136	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21k	L1	L1	L1FLnI	chr4	141811915	141822316	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IL15	ENSG00000164136	77928	INPP4B	ENSG00000109452	200844	None	None
L1FLnI_4q31.21l	L1	L1	L1FLnI	chr4	141830124	141840286	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	IL15	ENSG00000164136	96137	INPP4B	ENSG00000109452	182874	None	None
L1FLnI_4q31.21m	L1	L1	L1FLnI	chr4	141876848	141886876	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	INPP4B	ENSG00000109452	136284	IL15	ENSG00000164136	142861	None	None
L1FLnI_4q31.21n	L1	L1	L1FLnI	chr4	141962211	141972347	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IL15	ENSG00000164136	228224	INPP4B	ENSG00000109452	50813	None	None
L1FLnI_4q31.21o	L1	L1	L1FLnI	chr4	141986609	141996207	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	INPP4B	ENSG00000109452	26953	IL15	ENSG00000164136	252622	None	None
L1FLnI_4q31.21p	L1	L1	L1FLnI	chr4	142063065	142072990	+	noncoding	INPP4B	protein_coding	ANTISENSE	ENSG00000109452	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21q	L1	L1	L1FLnI	chr4	142111348	142120293	+	coding	INPP4B	protein_coding	ANTISENSE	ENSG00000109452	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21r	L1	L1	L1FLnI	chr4	142249846	142259867	+	coding	INPP4B	protein_coding	ANTISENSE	ENSG00000109452	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21s	L1	L1	L1FLnI	chr4	142469672	142478407	+	noncoding	INPP4B	protein_coding	ANTISENSE	ENSG00000109452	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chr4:142472322-142472332,chr4:142475681-142475929	chr4:142474262-142474283,chr4:142474398-142474431,chr4:142474438-142474447,chr4:142474450-142474461,chr4:142474685-142474694
L1FLnI_4q31.21t	L1	L1	L1FLnI	chr4	142644701	142654883	+	noncoding	INPP4B,AC139720.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000109452,ENSG00000249806	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21u	L1	L1	L1FLnI	chr4	142987378	142997542	+	coding	AC104596.1	lncRNA	ANTISENSE	ENSG00000250326	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21v	L1	L1	L1FLnI	chr4	142987378	142997532	+	coding	AC104596.1	lncRNA	ANTISENSE	ENSG00000250326	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21w	L1	L1	L1FLnI	chr4	143025186	143034046	+	noncoding	AC104596.1	lncRNA	ANTISENSE	ENSG00000250326	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21x	L1	L1	L1FLnI	chr4	143025186	143033990	+	noncoding	AC104596.1	lncRNA	ANTISENSE	ENSG00000250326	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21y	L1	L1	L1FLnI	chr4	143065135	143075488	-	noncoding	AC104596.1	lncRNA	SENSE	ENSG00000250326	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21z	L1	L1	L1FLnI	chr4	143096761	143106789	+	coding	AC104596.1	lncRNA	ANTISENSE	ENSG00000250326	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21aa	L1	L1	L1FLnI	chr4	143136567	143147010	+	coding	AC104596.1	lncRNA	ANTISENSE	ENSG00000250326	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21ba	L1	L1	L1FLnI	chr4	143136567	143146996	+	coding	AC104596.1	lncRNA	ANTISENSE	ENSG00000250326	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21ca	L1	L1	L1FLnI	chr4	143162958	143173090	+	coding	AC104596.1	lncRNA	ANTISENSE	ENSG00000250326	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21da	L1	L1	L1FLnI	chr4	143587744	143597876	-	coding	AC107223.1,FREM3	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000251600,ENSG00000183090	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21ea	L1	L1	L1FLnI	chr4	143658603	143668740	-	coding	AC107223.1,FREM3	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000251600,ENSG00000183090	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21fa	L1	L1	L1FLnI	chr4	143658616	143668740	-	coding	AC107223.1,FREM3	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000251600,ENSG00000183090	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21ga	L1	L1	L1FLnI	chr4	143748250	143758666	+	noncoding	AC107223.1	lncRNA	SENSE	ENSG00000251600	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21ha	L1	L1	L1FLnI	chr4	143768347	143777689	-	noncoding	AC107223.1	lncRNA	ANTISENSE	ENSG00000251600	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21ia	L1	L1	L1FLnI	chr4	143768347	143777097	-	noncoding	AC107223.1	lncRNA	ANTISENSE	ENSG00000251600	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21ja	L1	L1	L1FLnI	chr4	144147430	144157554	-	coding	AC107223.1,AC098588.3	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000251600,ENSG00000285783	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21ka	L1	L1	L1FLnI	chr4	144388056	144398191	+	coding	AC098588.3,AC098588.2	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000285783,ENSG00000285713	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21la	L1	L1	L1FLnI	chr4	144431132	144441608	+	noncoding	AC098588.3,AC098588.2	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000285783,ENSG00000285713	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21ma	L1	L1	L1FLnI	chr4	144478972	144489073	+	noncoding	AC098588.3,AC098588.2	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000285783,ENSG00000285713	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21na	L1	L1	L1FLnI	chr4	144765060	144775206	+	coding	AC098588.3,AC098588.2	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000285783,ENSG00000285713	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21oa	L1	L1	L1FLnI	chr4	144788120	144797381	+	coding	AC098588.3,AC098588.2	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000285783,ENSG00000285713	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21pa	L1	L1	L1FLnI	chr4	144833228	144843488	+	coding	AC098588.3,AC098588.2,ANAPC10	lncRNA,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000285783,ENSG00000285713,ENSG00000164162	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21qa	L1	L1	L1FLnI	chr4	144927643	144937718	-	noncoding	AC098588.2,ANAPC10	protein_coding,protein_coding	SENSE,SENSE	ENSG00000285713,ENSG00000164162	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21ra	L1	L1	L1FLnI	chr4	144956112	144964808	-	coding	AC098588.2,ANAPC10	protein_coding,protein_coding	SENSE,SENSE	ENSG00000285713,ENSG00000164162	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21sa	L1	L1	L1FLnI	chr4	145222602	145232130	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS23P4	ENSG00000240992	37680	OTUD4	ENSG00000164164	42013	None	None
L1ORF2_4q31.21	L1	L1	L1ORF2	chr4	145368340	145376383	+	coding	RTN3P1	processed_pseudogene	SENSE	ENSG00000251333	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:145375399-145375417,chr4:145375655-145375667,chr4:145375854-145375887,chr4:145376003-145376021
L1FLnI_4q31.21ta	L1	L1	L1FLnI	chr4	145454044	145462569	+	coding	AC093796.1,NMNAT1P4	lncRNA,processed_pseudogene	ANTISENSE,SENSE	ENSG00000286420,ENSG00000248745	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.21ua	L1	L1	L1FLnI	chr4	145562223	145572599	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SMAD1	ENSG00000170365	3047	MMAA	ENSG00000151611	26443	None	None
L1FLnI_4q31.21va	L1	L1	L1FLnI	chr4	145563560	145572599	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SMAD1	ENSG00000170365	4384	MMAA	ENSG00000151611	26443	None	None
L1FLnI_4q31.21wa	L1	L1	L1FLnI	chr4	145570846	145580975	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SMAD1	ENSG00000170365	11670	MMAA	ENSG00000151611	18067	None	None
L1FLnI_4q31.21xa	L1	L1	L1FLnI	chr4	145590822	145600921	-	noncoding	MMAA	protein_coding	ANTISENSE	ENSG00000151611	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.22a	L1	L1	L1FLnI	chr4	145961914	145971642	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108206.2	ENSG00000260303	80962	AC108206.1	ENSG00000201314	3674	None	None
L1FLnI_4q31.22b	L1	L1	L1FLnI	chr4	145997256	146007343	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108206.2	ENSG00000260303	45261	AC108206.1	ENSG00000201314	39016	None	None
L1FLnI_4q31.22c	L1	L1	L1FLnI	chr4	146019011	146027598	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108206.2	ENSG00000260303	25006	AC108206.1	ENSG00000201314	60771	chr4:146023716-146023818	None
L1FLnI_4q31.22d	L1	L1	L1FLnI	chr4	146041773	146051939	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108206.2	ENSG00000260303	665	AC108206.1	ENSG00000201314	83533	None	None
L1FLnI_4q31.22e	L1	L1	L1FLnI	chr4	146346520	146356552	+	coding	SLC10A7	protein_coding	ANTISENSE	ENSG00000120519	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.22f	L1	L1	L1FLnI	chr4	146346520	146356551	+	coding	SLC10A7	protein_coding	ANTISENSE	ENSG00000120519	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.22g	L1	L1	L1FLnI	chr4	146539241	146551260	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-44P	ENSG00000207182	28788	SLC10A7	ENSG00000120519	17277	None	None
L1FLnI_4q31.22h	L1	L1	L1FLnI	chr4	146541017	146551260	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-44P	ENSG00000207182	28788	SLC10A7	ENSG00000120519	19053	None	None
L1FLnI_4q31.22i	L1	L1	L1FLnI	chr4	146552431	146562580	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-44P	ENSG00000207182	17468	SLC10A7	ENSG00000120519	30467	None	None
L1FLnI_4q31.22j	L1	L1	L1FLnI	chr4	146660424	146670140	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	POU4F2	ENSG00000151615	17950	TTC29	ENSG00000137473	36498	None	None
L1FLnI_4q31.22k	L1	L1	L1FLnI	chr4	146770753	146780577	-	noncoding	TTC29	protein_coding	SENSE	ENSG00000137473	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.22l	L1	L1	L1FLnI	chr4	146800456	146810911	+	coding	TTC29	protein_coding	ANTISENSE	ENSG00000137473	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.22m	L1	L1	L1FLnI	chr4	146821637	146830640	-	noncoding	TTC29	protein_coding	SENSE	ENSG00000137473	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.22n	L1	L1	L1FLnI	chr4	147180119	147190530	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097450.1	ENSG00000286371	21051	MIR548G	ENSG00000221369	154099	None	None
L1FLnI_4q31.22o	L1	L1	L1FLnI	chr4	147262486	147271068	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548G	ENSG00000221369	73561	AC097450.1	ENSG00000286371	103418	None	None
L1FLnI_4q31.22p	L1	L1	L1FLnI	chr4	147270072	147279105	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548G	ENSG00000221369	65524	AC097450.1	ENSG00000286371	111004	None	None
L1FLnI_4q31.22q	L1	L1	L1FLnI	chr4	147288671	147299125	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC097450.1	ENSG00000286371	129603	MIR548G	ENSG00000221369	45504	None	None
L1FLnI_4q31.22r	L1	L1	L1FLnI	chr4	147431132	147440682	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC010683.1	ENSG00000241281	4781	PRMT5P1	ENSG00000249004	18042	None	None
L1FLnI_4q31.22s	L1	L1	L1FLnI	chr4	147465427	147475441	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	EDNRA	ENSG00000151617	5476	PRMT5P1	ENSG00000249004	6106	None	None
L1FLnI_4q31.23a	L1	L1	L1FLnI	chr4	148317376	148327404	-	coding	NR3C2	protein_coding	SENSE	ENSG00000151623	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.23b	L1	L1	L1FLnI	chr4	148515492	148525866	-	noncoding	AC002460.2	lncRNA	ANTISENSE	ENSG00000287292	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.23c	L1	L1	L1FLnI	chr4	148579693	148589560	-	noncoding	AC002460.2	lncRNA	ANTISENSE	ENSG00000287292	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.23d	L1	L1	L1FLnI	chr4	148925376	148934911	+	noncoding	AC002460.2	lncRNA	SENSE	ENSG00000287292	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.23e	L1	L1	L1FLnI	chr4	149062023	149072119	+	noncoding	AC108156.1	lncRNA	ANTISENSE	ENSG00000249752	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.23f	L1	L1	L1FLnI	chr4	149088096	149098234	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02430	ENSG00000250252	49559	AC108156.1	ENSG00000249752	25574	None	None
L1FLnI_4q31.23g	L1	L1	L1FLnI	chr4	149172070	149182488	+	coding	LINC02355	lncRNA	SENSE	ENSG00000248210	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.23h	L1	L1	L1FLnI	chr4	149216500	149225113	+	noncoding	LINC02355	lncRNA	SENSE	ENSG00000248210	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.23i	L1	L1	L1FLnI	chr4	149335084	149345493	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	IQCM	ENSG00000234828	6410	LINC02355	ENSG00000248210	56961	None	None
L1FLnI_4q31.23j	L1	L1	L1FLnI	chr4	149464524	149474636	+	coding	IQCM	protein_coding	ANTISENSE	ENSG00000234828	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.23k	L1	L1	L1FLnI	chr4	149479677	149489966	-	noncoding	IQCM	protein_coding	SENSE	ENSG00000234828	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.23l	L1	L1	L1FLnI	chr4	149479677	149489517	-	noncoding	IQCM	protein_coding	SENSE	ENSG00000234828	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.23m	L1	L1	L1FLnI	chr4	149602188	149612454	+	noncoding	IQCM	protein_coding	ANTISENSE	ENSG00000234828	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.23n	L1	L1	L1FLnI	chr4	149791731	149801531	+	noncoding	IQCM	protein_coding	ANTISENSE	ENSG00000234828	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.23o	L1	L1	L1FLnI	chr4	149844706	149854737	+	coding	IQCM	protein_coding	ANTISENSE	ENSG00000234828	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.23p	L1	L1	L1FLnI	chr4	149844706	149854753	+	coding	IQCM	protein_coding	ANTISENSE	ENSG00000234828	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.23q	L1	L1	L1FLnI	chr4	149912026	149922057	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP167	ENSG00000202331	4351	RNU6-1230P	ENSG00000207121	12319	None	None
L1FLnI_4q31.3a	L1	L1	L1FLnI	chr4	150267414	150277926	+	noncoding	LRBA	protein_coding	ANTISENSE	ENSG00000198589	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.3b	L1	L1	L1FLnI	chr4	150499072	150508314	+	coding	LRBA	protein_coding	ANTISENSE	ENSG00000198589	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.3c	L1	L1	L1FLnI	chr4	151507797	151517959	+	coding	FAM160A1	protein_coding	SENSE	ENSG00000164142	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:151517600-151517893	None
L1FLnI_4q31.3d	L1	L1	L1FLnI	chr4	152122857	152132250	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079340.1	ENSG00000250706	14135	AC079340.3	ENSG00000287504	6360	None	None
L1FLnI_4q31.3e	L1	L1	L1FLnI	chr4	153100972	153111447	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRIM2	ENSG00000109654	40895	AC093599.1	ENSG00000249022	9409	None	None
L1FLnI_4q31.3f	L1	L1	L1FLnI	chr4	153101347	153111447	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRIM2	ENSG00000109654	40895	AC093599.1	ENSG00000249022	9784	None	None
L1FLnI_4q31.3g	L1	L1	L1FLnI	chr4	153853793	153863694	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079298.3	ENSG00000280241	85024	SFRP2	ENSG00000145423	64710	None	None
L1FLnI_4q31.3h	L1	L1	L1FLnI	chr4	153977579	153987723	-	coding	AC079298.3	lncRNA	ANTISENSE	ENSG00000280241	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.3i	L1	L1	L1FLnI	chr4	154104982	154115463	+	noncoding	AC079298.3	lncRNA	SENSE	ENSG00000280241	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q31.3j	L1	L1	L1FLnI	chr4	154144079	154153605	-	noncoding	AC079298.3	lncRNA	ANTISENSE	ENSG00000280241	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:154152794-154152796
L1FLnI_4q32.1a	L1	L1	L1FLnI	chr4	154643228	154651806	+	noncoding	LRAT	protein_coding	SENSE	ENSG00000121207	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.1b	L1	L1	L1FLnI	chr4	154771264	154779971	-	coding	AC009567.1	lncRNA	SENSE	ENSG00000249041	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.1c	L1	L1	L1FLnI	chr4	154771276	154779971	-	coding	AC009567.1	lncRNA	SENSE	ENSG00000249041	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.1d	L1	L1	L1FLnI	chr4	154888191	154898650	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBM46	ENSG00000151962	59378	AC097467.3	ENSG00000250910	275066	None	None
L1FLnI_4q32.1e	L1	L1	L1FLnI	chr4	155281351	155289933	-	coding	AC097467.3,AC097467.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000250910,ENSG00000249924	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.1f	L1	L1	L1FLnI	chr4	155889070	155897905	+	coding	TDO2	protein_coding	SENSE	ENSG00000151790	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.1g	L1	L1	L1FLnI	chr4	156126729	156137517	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FTH1P21	ENSG00000249013	119741	AC096736.3	ENSG00000251511	448462	None	None
L1FLnI_4q32.1h	L1	L1	L1FLnI	chr4	156284068	156294099	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC096736.3	ENSG00000251511	291880	FTH1P21	ENSG00000249013	277080	None	None
L1FLnI_4q32.1i	L1	L1	L1FLnI	chr4	156363771	156373795	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FTH1P21	ENSG00000249013	356783	AC096736.3	ENSG00000251511	212184	None	None
L1FLnI_4q32.1j	L1	L1	L1FLnI	chr4	157156847	157166950	-	coding	GLRB	protein_coding	ANTISENSE	ENSG00000109738	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.1k	L1	L1	L1FLnI	chr4	157174394	157184416	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-582P	ENSG00000199859	17146	GLRB	ENSG00000109738	2304	None	None
L1FLnI_4q32.1l	L1	L1	L1FLnI	chr4	157688006	157697929	+	coding	AC093817.2	lncRNA	ANTISENSE	ENSG00000286133	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.1m	L1	L1	L1FLnI	chr4	157754326	157764468	-	coding	AC093817.2	lncRNA	SENSE	ENSG00000286133	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.1n	L1	L1	L1FLnI	chr4	157921149	157931267	-	noncoding	AC017037.5,AC084740.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000286862,ENSG00000287226	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.1o	L1	L1	L1FLnI	chr4	158022217	158033014	+	noncoding	AC084740.1	lncRNA	ANTISENSE	ENSG00000287226	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.1p	L1	L1	L1FLnI	chr4	158034916	158044139	+	noncoding	AC084740.1	lncRNA	ANTISENSE	ENSG00000287226	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_4q32.1	L1	L1	L1ORF2	chr4	158083226	158091272	-	coding	AC084740.1	lncRNA	SENSE	ENSG00000287226	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.1q	L1	L1	L1FLnI	chr4	158308230	158318003	-	noncoding	RXFP1	protein_coding	ANTISENSE	ENSG00000171509	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr4:158315221-158315246,chr4:158315310-158315319,chr4:158315332-158315341
L1FLnI_4q32.1r	L1	L1	L1FLnI	chr4	158362057	158372202	-	coding	RXFP1	protein_coding	ANTISENSE	ENSG00000171509	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.1s	L1	L1	L1FLnI	chr4	158428244	158437280	+	coding	RXFP1	protein_coding	SENSE	ENSG00000171509	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.1t	L1	L1	L1FLnI	chr4	158543951	158554099	-	coding	RXFP1	protein_coding	ANTISENSE	ENSG00000171509	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.1u	L1	L1	L1FLnI	chr4	158979294	158988289	+	coding	C4orf45	protein_coding	ANTISENSE	ENSG00000164123	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.1v	L1	L1	L1FLnI	chr4	159527531	159537673	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02233	ENSG00000250488	128160	AC074344.2	ENSG00000250180	126285	None	None
L1FLnI_4q32.1w	L1	L1	L1FLnI	chr4	159566806	159575380	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02233	ENSG00000250488	90453	AC074344.2	ENSG00000250180	165560	None	None
L1FLnI_4q32.1x	L1	L1	L1FLnI	chr4	159608916	159619039	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02233	ENSG00000250488	46794	AC074344.2	ENSG00000250180	207670	None	None
L1FLnI_4q32.1y	L1	L1	L1FLnI	chr4	159623229	159633680	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02233	ENSG00000250488	32153	AC074344.2	ENSG00000250180	221983	None	None
L1FLnI_4q32.1z	L1	L1	L1FLnI	chr4	159709014	159719062	-	coding	LINC02233	lncRNA	SENSE	ENSG00000250488	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.1aa	L1	L1	L1FLnI	chr4	159709041	159719062	-	coding	LINC02233	lncRNA	SENSE	ENSG00000250488	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.1ba	L1	L1	L1FLnI	chr4	159800873	159810875	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02233	ENSG00000250488	23045	AC093853.1	ENSG00000250997	710954	None	None
L1FLnI_4q32.1ca	L1	L1	L1FLnI	chr4	159871906	159881880	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093853.1	ENSG00000250997	639949	LINC02233	ENSG00000250488	94078	None	None
L1FLnI_4q32.1da	L1	L1	L1FLnI	chr4	159871906	159881458	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093853.1	ENSG00000250997	640371	LINC02233	ENSG00000250488	94078	None	None
L1FLnI_4q32.1ea	L1	L1	L1FLnI	chr4	159888643	159897356	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093853.1	ENSG00000250997	624473	LINC02233	ENSG00000250488	110815	None	None
L1FLnI_4q32.1fa	L1	L1	L1FLnI	chr4	159928572	159938708	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093853.1	ENSG00000250997	583121	LINC02233	ENSG00000250488	150744	None	None
L1FLnI_4q32.1ga	L1	L1	L1FLnI	chr4	159960538	159970030	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093853.1	ENSG00000250997	551799	LINC02233	ENSG00000250488	182710	None	None
L1FLnI_4q32.1ha	L1	L1	L1FLnI	chr4	160119719	160129715	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093853.1	ENSG00000250997	392114	LINC02233	ENSG00000250488	341891	None	None
L1FLnI_4q32.1ia	L1	L1	L1FLnI	chr4	160150669	160160826	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093853.1	ENSG00000250997	361003	LINC02233	ENSG00000250488	372841	None	None
L1FLnI_4q32.1ja	L1	L1	L1FLnI	chr4	160337470	160346440	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093853.1	ENSG00000250997	175389	LINC02233	ENSG00000250488	559642	None	None
L1FLnI_4q32.1ka	L1	L1	L1FLnI	chr4	160429280	160437963	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093853.1	ENSG00000250997	83866	LINC02233	ENSG00000250488	651452	None	None
L1FLnI_4q32.1la	L1	L1	L1FLnI	chr4	160570534	160580560	+	coding	LINC02477	lncRNA	SENSE	ENSG00000249425	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.1ma	L1	L1	L1FLnI	chr4	160570534	160580585	+	coding	LINC02477	lncRNA	SENSE	ENSG00000249425	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.2a	L1	L1	L1FLnI	chr4	161111674	161122207	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104793.1	ENSG00000249568	256746	RPS14P7	ENSG00000242635	292805	None	None
L1FLnI_4q32.2b	L1	L1	L1FLnI	chr4	161427265	161436207	+	noncoding	FSTL5	protein_coding	ANTISENSE	ENSG00000168843	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.2c	L1	L1	L1FLnI	chr4	162624423	162633572	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TOMM22P4	ENSG00000248396	102382	AC021134.1	ENSG00000248431	71787	None	None
L1FLnI_4q32.2d	L1	L1	L1FLnI	chr4	162860813	162869898	+	coding	AC021134.1	lncRNA	SENSE	ENSG00000248431	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.2e	L1	L1	L1FLnI	chr4	162860813	162869546	+	coding	AC021134.1	lncRNA	SENSE	ENSG00000248431	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.2f	L1	L1	L1FLnI	chr4	162998233	163008677	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4454	ENSG00000283468	84897	AC084752.1	ENSG00000251123	12817	None	None
L1FLnI_4q32.2g	L1	L1	L1FLnI	chr4	163206508	163216468	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC079238.1	ENSG00000250547	49107	NAF1	ENSG00000145414	39618	None	None
L1FLnI_4q32.2h	L1	L1	L1FLnI	chr4	163282038	163291401	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPY1R	ENSG00000164128	32561	AC079238.1	ENSG00000250547	15455	None	None
L1FLnI_4q32.2i	L1	L1	L1FLnI	chr4	163572818	163581404	-	noncoding	MARCHF1	protein_coding	SENSE	ENSG00000145416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.2j	L1	L1	L1FLnI	chr4	163572831	163581404	-	noncoding	MARCHF1	protein_coding	SENSE	ENSG00000145416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.3a	L1	L1	L1FLnI	chr4	163628734	163638753	+	coding	MARCHF1	protein_coding	ANTISENSE	ENSG00000145416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.3b	L1	L1	L1FLnI	chr4	163718535	163728652	-	coding	MARCHF1	protein_coding	SENSE	ENSG00000145416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.3c	L1	L1	L1FLnI	chr4	164018783	164029200	+	coding	MARCHF1	protein_coding	ANTISENSE	ENSG00000145416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr4:164027359-164027363
L1FLnI_4q32.3d	L1	L1	L1FLnI	chr4	164097250	164107278	+	coding	MARCHF1	protein_coding	ANTISENSE	ENSG00000145416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.3e	L1	L1	L1FLnI	chr4	164138309	164148332	+	coding	MARCHF1	protein_coding	ANTISENSE	ENSG00000145416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.3f	L1	L1	L1FLnI	chr4	164238115	164248120	+	coding	MARCHF1	protein_coding	ANTISENSE	ENSG00000145416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.3g	L1	L1	L1FLnI	chr4	164347251	164357276	+	coding	MARCHF1	protein_coding	ANTISENSE	ENSG00000145416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.3h	L1	L1	L1FLnI	chr4	164447975	164458768	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MARCHF1	ENSG00000145416	63925	AC074198.2	ENSG00000251162	138951	None	None
L1FLnI_4q32.3i	L1	L1	L1FLnI	chr4	164470570	164482162	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074198.2	ENSG00000251162	115557	MARCHF1	ENSG00000145416	86520	None	None
L1FLnI_4q32.3j	L1	L1	L1FLnI	chr4	164541158	164549874	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MARCHF1	ENSG00000145416	157108	AC074198.2	ENSG00000251162	47845	None	None
L1ORF2_4q32.3	L1	L1	L1ORF2	chr4	164552478	164560525	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC074198.2	ENSG00000251162	37194	MARCHF1	ENSG00000145416	168428	None	None
L1FLnI_4q32.3k	L1	L1	L1FLnI	chr4	164579521	164588886	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074198.2	ENSG00000251162	8833	MARCHF1	ENSG00000145416	195471	None	None
L1FLnI_4q32.3l	L1	L1	L1FLnI	chr4	164619236	164629907	+	noncoding	RNU6-284P	snRNA	SENSE	ENSG00000223037	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.3m	L1	L1	L1FLnI	chr4	164626656	164637181	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-284P	ENSG00000223037	5819	AC074198.1	ENSG00000248162	88129	None	None
L1FLnI_4q32.3n	L1	L1	L1FLnI	chr4	164646181	164655717	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-284P	ENSG00000223037	25344	AC074198.1	ENSG00000248162	69593	None	None
L1FLnI_4q32.3o	L1	L1	L1FLnI	chr4	165265110	165274409	-	coding	KLHL2	protein_coding	ANTISENSE	ENSG00000109466	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.3p	L1	L1	L1FLnI	chr4	165815406	165825531	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01179	ENSG00000249500	52628	TLL1	ENSG00000038295	47706	None	None
L1FLnI_4q32.3q	L1	L1	L1FLnI	chr4	165896283	165906232	-	coding	TLL1	protein_coding	ANTISENSE	ENSG00000038295	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.3r	L1	L1	L1FLnI	chr4	166128427	166138309	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107055.1	ENSG00000206711	174626	TLL1	ENSG00000038295	23970	None	None
L1FLnI_4q32.3s	L1	L1	L1FLnI	chr4	166262518	166272088	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TLL1	ENSG00000038295	158061	AC107055.1	ENSG00000206711	40847	None	None
L1FLnI_4q32.3t	L1	L1	L1FLnI	chr4	166459814	166469845	+	coding	AC097487.1	lncRNA	ANTISENSE	ENSG00000249675	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.3u	L1	L1	L1FLnI	chr4	166566478	166576507	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC097487.1	ENSG00000249675	40359	SPOCK3	ENSG00000196104	156877	None	None
L1FLnI_4q32.3v	L1	L1	L1FLnI	chr4	166739991	166750149	+	coding	SPOCK3	protein_coding	ANTISENSE	ENSG00000196104	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.3w	L1	L1	L1FLnI	chr4	166752397	166762408	+	coding	SPOCK3	protein_coding	ANTISENSE	ENSG00000196104	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.3x	L1	L1	L1FLnI	chr4	166763699	166773824	-	coding	SPOCK3	protein_coding	SENSE	ENSG00000196104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.3y	L1	L1	L1FLnI	chr4	167098804	167108404	+	noncoding	SPOCK3	protein_coding	ANTISENSE	ENSG00000196104	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q32.3z	L1	L1	L1FLnI	chr4	167275637	167285661	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC079349.1	ENSG00000250150	21249	SPOCK3	ENSG00000196104	40841	None	None
L1FLnI_4q32.3aa	L1	L1	L1FLnI	chr4	167343018	167353061	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL776P	ENSG00000240772	47434	AC079349.1	ENSG00000250150	34229	None	None
L1FLnI_4q32.3ba	L1	L1	L1FLnI	chr4	167343018	167352178	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL776P	ENSG00000240772	48317	AC079349.1	ENSG00000250150	34229	None	None
L1FLnI_4q32.3ca	L1	L1	L1FLnI	chr4	167854383	167864403	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC105148.1	ENSG00000270336	112096	AC116634.1	ENSG00000248601	82271	None	None
L1FLnI_4q32.3da	L1	L1	L1FLnI	chr4	168438491	168448538	+	coding	DDX60L	protein_coding	ANTISENSE	ENSG00000181381	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr4:168440434-168440874	chr4:168441687-168441716
L1FLnI_4q32.3ea	L1	L1	L1FLnI	chr4	168931486	168941534	+	noncoding	CBR4	protein_coding	ANTISENSE	ENSG00000145439	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:168932699-168933105	None
L1FLnI_4q32.3fa	L1	L1	L1FLnI	chr4	168977930	168986579	+	coding	CBR4	protein_coding	ANTISENSE	ENSG00000145439	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q33a	L1	L1	L1FLnI	chr4	169314647	169324347	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SH3RF1	ENSG00000154447	43691	NEK1	ENSG00000137601	68510	None	None
L1FLnI_4q33b	L1	L1	L1FLnI	chr4	169314647	169324361	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SH3RF1	ENSG00000154447	43691	NEK1	ENSG00000137601	68496	None	None
L1FLnI_4q33c	L1	L1	L1FLnI	chr4	169445187	169453920	+	noncoding	NEK1	protein_coding	ANTISENSE	ENSG00000137601	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q33d	L1	L1	L1FLnI	chr4	169495043	169504048	-	coding	NEK1	protein_coding	SENSE	ENSG00000137601	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_4q33	L1	L1	L1FLI	chr4	169514489	169522534	-	coding	NEK1	protein_coding	SENSE	ENSG00000137601	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q33e	L1	L1	L1FLnI	chr4	170203609	170213763	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069306.1	ENSG00000248739	61077	LINC01612	ENSG00000250266	12772	None	None
L1FLnI_4q33f	L1	L1	L1FLnI	chr4	170262780	170272942	-	coding	LINC01612	lncRNA	ANTISENSE	ENSG00000250266	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q33g	L1	L1	L1FLnI	chr4	170312912	170323032	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01612	ENSG00000250266	29189	LINC02512	ENSG00000251061	20057	None	None
L1FLnI_4q33h	L1	L1	L1FLnI	chr4	170355436	170367505	-	coding	LINC02512	lncRNA	ANTISENSE	ENSG00000251061	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q33i	L1	L1	L1FLnI	chr4	170370025	170380089	+	noncoding	LINC02512	lncRNA	SENSE	ENSG00000251061	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q33j	L1	L1	L1FLnI	chr4	170427884	170437924	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02512	ENSG00000251061	55573	AC074255.1	ENSG00000250082	43771	None	None
L1FLnI_4q33k	L1	L1	L1FLnI	chr4	170504556	170514694	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HSP90AA6P	ENSG00000181359	66776	AC074255.1	ENSG00000250082	22361	None	None
L1FLnI_4q33l	L1	L1	L1FLnI	chr4	170504567	170514694	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HSP90AA6P	ENSG00000181359	66776	AC074255.1	ENSG00000250082	22372	None	None
L1FLnI_4q33m	L1	L1	L1FLnI	chr4	170635727	170645917	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HSP90AA6P	ENSG00000181359	30277	LINC02382	ENSG00000250968	96552	None	None
L1FLnI_4q33n	L1	L1	L1FLnI	chr4	170782482	170792502	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC097486.1	ENSG00000249943	21837	LINC02382	ENSG00000250968	38764	None	None
L1FLnI_4q33o	L1	L1	L1FLnI	chr4	170985377	170995752	-	noncoding	AC034159.2	lncRNA	ANTISENSE	ENSG00000286580	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q33p	L1	L1	L1FLnI	chr4	170985377	170994818	-	noncoding	AC034159.2	lncRNA	ANTISENSE	ENSG00000286580	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q34.1a	L1	L1	L1FLnI	chr4	171309491	171318212	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074254.2	ENSG00000287210	176472	LINC02504	ENSG00000248339	11224	None	None
L1FLnI_4q34.1b	L1	L1	L1FLnI	chr4	171316489	171326406	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02504	ENSG00000248339	18222	AC074254.2	ENSG00000287210	168278	None	None
L1FLnI_4q34.1c	L1	L1	L1FLnI	chr4	171755332	171765112	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02174	ENSG00000249297	116569	GALNTL6	ENSG00000174473	47142	None	None
L1FLnI_4q34.1d	L1	L1	L1FLnI	chr4	171899632	171909658	+	coding	GALNTL6	protein_coding	SENSE	ENSG00000174473	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q34.1e	L1	L1	L1FLnI	chr4	172014000	172022767	-	noncoding	GALNTL6	protein_coding	ANTISENSE	ENSG00000174473	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q34.1f	L1	L1	L1FLnI	chr4	172258108	172267078	-	noncoding	GALNTL6	protein_coding	ANTISENSE	ENSG00000174473	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q34.1g	L1	L1	L1FLnI	chr4	172295870	172306014	-	coding	GALNTL6	protein_coding	ANTISENSE	ENSG00000174473	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q34.1h	L1	L1	L1FLnI	chr4	172451415	172461872	+	noncoding	GALNTL6	protein_coding	SENSE	ENSG00000174473	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q34.1i	L1	L1	L1FLnI	chr4	172507918	172518585	-	noncoding	GALNTL6	protein_coding	ANTISENSE	ENSG00000174473	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q34.1j	L1	L1	L1FLnI	chr4	172606707	172615244	-	noncoding	GALNTL6	protein_coding	ANTISENSE	ENSG00000174473	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr4:172615188-172615516	None
L1FLnI_4q34.1k	L1	L1	L1FLnI	chr4	172887365	172896066	-	noncoding	GALNTL6	protein_coding	ANTISENSE	ENSG00000174473	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q34.1l	L1	L1	L1FLnI	chr4	172908752	172918901	+	coding	GALNTL6	protein_coding	SENSE	ENSG00000174473	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q34.1m	L1	L1	L1FLnI	chr4	173064002	173072676	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105285.1	ENSG00000245213	22192	GALNTL6	ENSG00000174473	22443	None	None
L1FLnI_4q34.1n	L1	L1	L1FLnI	chr4	173078341	173088438	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105285.1	ENSG00000245213	6430	GALNTL6	ENSG00000174473	36782	None	None
L1FLnI_4q34.1o	L1	L1	L1FLnI	chr4	173602564	173612686	-	coding	HAND2-AS1	lncRNA	ANTISENSE	ENSG00000237125	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q34.1p	L1	L1	L1FLnI	chr4	173622523	173631523	-	noncoding	HAND2-AS1	lncRNA	ANTISENSE	ENSG00000237125	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q34.1q	L1	L1	L1FLnI	chr4	173772936	173782600	-	noncoding	LINC02269	lncRNA	ANTISENSE	ENSG00000250708	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q34.1r	L1	L1	L1FLnI	chr4	173782409	173792544	+	coding	LINC02269	lncRNA	SENSE	ENSG00000250708	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q34.1s	L1	L1	L1FLnI	chr4	173962448	173972535	-	coding	LINC02269,AC106895.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000250708,ENSG00000251216	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q34.1t	L1	L1	L1FLnI	chr4	174411398	174421539	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4276	ENSG00000265846	2256	AC116616.1	ENSG00000249875	34953	None	None
L1FLnI_4q34.1u	L1	L1	L1FLnI	chr4	174774964	174784978	+	coding	GLRA3	protein_coding	ANTISENSE	ENSG00000145451	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q34.1v	L1	L1	L1FLnI	chr4	175016242	175026251	+	coding	AC022325.1	processed_pseudogene	SENSE	ENSG00000249411	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q34.1w	L1	L1	L1FLnI	chr4	175051595	175060703	+	noncoding	AC022325.2	lncRNA	ANTISENSE	ENSG00000286494	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q34.1x	L1	L1	L1FLnI	chr4	175117425	175125933	+	noncoding	AC022325.2	lncRNA	ANTISENSE	ENSG00000286494	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q34.2a	L1	L1	L1FLnI	chr4	175599474	175608832	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GPM6A	ENSG00000150625	24102	ADAM20P2	ENSG00000248574	23334	None	None
L1FLnI_4q34.2b	L1	L1	L1FLnI	chr4	176037756	176048575	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	WDR17	ENSG00000150627	17259	MARK2P4	ENSG00000250372	23339	None	None
L1FLnI_4q34.2c	L1	L1	L1FLnI	chr4	176362142	176372913	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093801.2	ENSG00000248480	258479	SPCS3	ENSG00000129128	29897	None	None
L1FLnI_4q34.3a	L1	L1	L1FLnI	chr4	176688925	176698647	+	coding	AC093801.1,VEGFC	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000248388,ENSG00000150630	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q34.3b	L1	L1	L1FLnI	chr4	176688931	176698629	+	coding	AC093801.1,VEGFC	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000248388,ENSG00000150630	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q34.3c	L1	L1	L1FLnI	chr4	177013719	177023892	+	coding	AC097518.2	lncRNA	ANTISENSE	ENSG00000287544	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q34.3d	L1	L1	L1FLnI	chr4	177843396	177851920	-	coding	LINC01098,LINC01099	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000231171,ENSG00000251504	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q34.3e	L1	L1	L1FLnI	chr4	177843404	177851920	-	coding	LINC01098,LINC01099	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000231171,ENSG00000251504	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q34.3f	L1	L1	L1FLnI	chr4	178011532	178021562	+	coding	LINC01098	lncRNA	SENSE	ENSG00000231171	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q34.3g	L1	L1	L1FLnI	chr4	178488752	178497911	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP173	ENSG00000201727	81922	AC017087.1	ENSG00000212191	187975	None	None
L1FLnI_4q34.3h	L1	L1	L1FLnI	chr4	178510439	178518968	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC017087.1	ENSG00000212191	166918	RNA5SP173	ENSG00000201727	103609	None	None
L1FLnI_4q34.3i	L1	L1	L1FLnI	chr4	178633190	178642535	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP173	ENSG00000201727	226360	AC017087.1	ENSG00000212191	43351	None	None
L1FLnI_4q34.3j	L1	L1	L1FLnI	chr4	178880431	178890579	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC017087.1	ENSG00000212191	194475	AC018710.1	ENSG00000250839	178858	None	None
L1FLnI_4q34.3k	L1	L1	L1FLnI	chr4	179026456	179036198	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC017087.1	ENSG00000212191	340500	AC018710.1	ENSG00000250839	33239	None	None
L1FLnI_4q34.3l	L1	L1	L1FLnI	chr4	179569688	179580237	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC020551.1	ENSG00000250993	104383	AC021193.1	ENSG00000248921	276616	None	None
L1FLnI_4q34.3m	L1	L1	L1FLnI	chr4	179569688	179579671	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC020551.1	ENSG00000250993	104383	AC021193.1	ENSG00000248921	277182	None	None
L1FLnI_4q34.3n	L1	L1	L1FLnI	chr4	179633024	179643178	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC020551.1	ENSG00000250993	167719	AC021193.1	ENSG00000248921	213675	None	chr4:179634271-179634275
L1FLnI_4q34.3o	L1	L1	L1FLnI	chr4	179679158	179689302	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021193.1	ENSG00000248921	167551	AC020551.1	ENSG00000250993	213853	None	None
L1FLnI_4q34.3p	L1	L1	L1FLnI	chr4	179780487	179790027	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021193.1	ENSG00000248921	66826	AC020551.1	ENSG00000250993	315182	None	None
L1FLnI_4q34.3q	L1	L1	L1FLnI	chr4	180778567	180787289	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00290	ENSG00000248197	276800	AC104803.1	ENSG00000249883	19529	None	None
L1FLnI_4q34.3r	L1	L1	L1FLnI	chr4	180869354	180879757	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00290	ENSG00000248197	184332	AC104803.1	ENSG00000249883	110316	None	None
L1FLnI_4q34.3s	L1	L1	L1FLnI	chr4	181408391	181418415	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093840.1	ENSG00000225356	104251	LINC02500	ENSG00000249460	143246	None	None
L1FLnI_4q34.3t	L1	L1	L1FLnI	chr4	181923214	181933674	+	coding	TENM3-AS1	lncRNA	ANTISENSE	ENSG00000177822	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q35.1a	L1	L1	L1FLnI	chr4	182356218	182366373	-	coding	TENM3	protein_coding	ANTISENSE	ENSG00000218336	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q35.1b	L1	L1	L1FLnI	chr4	182778559	182788580	-	coding	TENM3	protein_coding	ANTISENSE	ENSG00000218336	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q35.1c	L1	L1	L1FLnI	chr4	184173448	184183526	+	noncoding	ENPP6	protein_coding	ANTISENSE	ENSG00000164303	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q35.1d	L1	L1	L1FLnI	chr4	184173448	184183532	+	noncoding	ENPP6	protein_coding	ANTISENSE	ENSG00000164303	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q35.1e	L1	L1	L1FLnI	chr4	184204729	184214753	+	coding	ENPP6	protein_coding	ANTISENSE	ENSG00000164303	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q35.1f	L1	L1	L1FLnI	chr4	186109895	186119920	-	coding	FAM149A	protein_coding	ANTISENSE	ENSG00000109794	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q35.1g	L1	L1	L1FLnI	chr4	186179885	186189422	-	coding	AC110771.1	TEC	SENSE	ENSG00000279943	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q35.2a	L1	L1	L1FLnI	chr4	186377629	186388121	+	noncoding	F11-AS1	lncRNA	ANTISENSE	ENSG00000251165	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q35.2b	L1	L1	L1FLnI	chr4	186377629	186387726	+	noncoding	F11-AS1	lncRNA	ANTISENSE	ENSG00000251165	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q35.2c	L1	L1	L1FLnI	chr4	187047023	187057150	+	coding	AC110772.2	lncRNA	SENSE	ENSG00000250971	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q35.2d	L1	L1	L1FLnI	chr4	187401679	187412391	-	noncoding	LINC02515	lncRNA	ANTISENSE	ENSG00000250620	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q35.2e	L1	L1	L1FLnI	chr4	187856287	187866420	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108073.3	ENSG00000286641	75744	ADAM20P3	ENSG00000249162	108088	None	None
L1FLnI_4q35.2f	L1	L1	L1FLnI	chr4	188557771	188567787	-	coding	LINC01060	lncRNA	ANTISENSE	ENSG00000249378	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_4q35.2g	L1	L1	L1FLnI	chr4	189112631	189122504	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC122138.1	ENSG00000250024	110556	AC107391.1	ENSG00000251310	70596	None	None
L1FLnI_4q35.2h	L1	L1	L1FLnI	chr4	189133587	189143604	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC122138.1	ENSG00000250024	131512	AC107391.1	ENSG00000251310	49496	None	None
L1FLnI_4q35.2i	L1	L1	L1FLnI	chr4	189239496	189249654	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105924.1	ENSG00000249877	39023	AC107391.1	ENSG00000251310	34619	None	None
L1FLnI_4q35.2j	L1	L1	L1FLnI	chr4	189245125	189254063	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107391.1	ENSG00000251310	40248	AC105924.1	ENSG00000249877	34614	None	None
L1FLnI_4q35.2k	L1	L1	L1FLnI	chr4	189960272	189970347	+	coding	FRG1	protein_coding	SENSE	ENSG00000109536	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.33a	L1	L1	L1FLnI	chr5	59630	69759	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PLEKHG4B	ENSG00000153404	22392	AC113430.1	ENSG00000250020	715	None	None
L1FLnI_5p15.33b	L1	L1	L1FLnI	chr5	730826	739620	+	noncoding	ZDHHC11B,AC026740.3	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000206077,ENSG00000286094	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.33c	L1	L1	L1FLnI	chr5	1706320	1716335	+	coding	MIR4277	miRNA	ANTISENSE	ENSG00000263746	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_5p15.33	L1	L1	L1ORF2	chr5	3438015	3446076	+	coding	LINC01019	lncRNA	ANTISENSE	ENSG00000248118	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.33d	L1	L1	L1FLnI	chr5	3935310	3944651	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025773.1	ENSG00000248962	68057	IRX1	ENSG00000170549	333907	None	None
L1FLnI_5p15.32a	L1	L1	L1FLnI	chr5	4495848	4505872	-	coding	AC106799.2	lncRNA	SENSE	ENSG00000248973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.32b	L1	L1	L1FLnI	chr5	4559721	4568956	+	noncoding	AC106799.2	lncRNA	ANTISENSE	ENSG00000248973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.32c	L1	L1	L1FLnI	chr5	4611930	4621937	+	coding	AC106799.2	lncRNA	ANTISENSE	ENSG00000248973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.32d	L1	L1	L1FLnI	chr5	4705843	4716423	+	noncoding	AC106799.2	lncRNA	ANTISENSE	ENSG00000248973	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.32e	L1	L1	L1FLnI	chr5	4887083	4897198	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010451.3	ENSG00000251506	70566	AC026415.1	ENSG00000249941	12324	None	None
L1FLnI_5p15.32f	L1	L1	L1FLnI	chr5	4887097	4897198	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010451.3	ENSG00000251506	70566	AC026415.1	ENSG00000249941	12338	None	None
L1FLnI_5p15.32g	L1	L1	L1FLnI	chr5	4957605	4966408	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026415.1	ENSG00000249941	82846	AC010451.3	ENSG00000251506	1356	None	None
L1FLnI_5p15.32h	L1	L1	L1FLnI	chr5	5944170	5953333	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010266.2	ENSG00000261037	65696	AC026736.1	ENSG00000286986	249428	None	None
L1FLnI_5p15.32i	L1	L1	L1FLnI	chr5	5944170	5952751	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010266.2	ENSG00000261037	66278	AC026736.1	ENSG00000286986	249428	None	None
L1FLnI_5p15.32j	L1	L1	L1FLnI	chr5	5991557	6001490	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010266.2	ENSG00000261037	17539	AC026736.1	ENSG00000286986	296815	None	None
L1FLnI_5p15.32k	L1	L1	L1FLnI	chr5	6122473	6132455	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010266.1	ENSG00000259861	91632	AC026797.1	ENSG00000278913	1848	None	None
L1FLnI_5p15.31a	L1	L1	L1FLnI	chr5	6948313	6958795	+	coding	LINC02196	lncRNA	SENSE	ENSG00000250974	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.31b	L1	L1	L1FLnI	chr5	7124781	7134799	-	coding	LINC02196	lncRNA	ANTISENSE	ENSG00000250974	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.31c	L1	L1	L1FLnI	chr5	7152627	7161843	-	noncoding	LINC02196	lncRNA	ANTISENSE	ENSG00000250974	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.31d	L1	L1	L1FLnI	chr5	7167050	7177206	+	coding	LINC02196	lncRNA	SENSE	ENSG00000250974	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.31e	L1	L1	L1FLnI	chr5	7190271	7200295	+	coding	LINC02196	lncRNA	SENSE	ENSG00000250974	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.31f	L1	L1	L1FLnI	chr5	7227092	7237233	+	coding	AC091889.1	lncRNA	ANTISENSE	ENSG00000286254	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr5:7230323-7230421	None
L1FLnI_5p15.31g	L1	L1	L1FLnI	chr5	8083717	8093744	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC091912.2	ENSG00000280251	49874	AC091941.1	ENSG00000280338	2956	None	None
L1FLnI_5p15.31h	L1	L1	L1FLnI	chr5	8155564	8165069	+	coding	AC091912.1	unprocessed_pseudogene	ANTISENSE	ENSG00000249486	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.31i	L1	L1	L1FLnI	chr5	8155564	8165089	+	coding	AC091912.1	unprocessed_pseudogene	ANTISENSE	ENSG00000249486	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.31j	L1	L1	L1FLnI	chr5	8216526	8226685	+	noncoding	AC091912.3	lncRNA	ANTISENSE	ENSG00000288002	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.31k	L1	L1	L1FLnI	chr5	8304747	8313582	+	noncoding	AC091912.3	lncRNA	ANTISENSE	ENSG00000288002	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.31l	L1	L1	L1FLnI	chr5	8727358	8737488	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC091932.4	ENSG00000280438	9475	AC091932.2	ENSG00000278877	17381	None	None
L1FLnI_5p15.31m	L1	L1	L1FLnI	chr5	8727358	8737475	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC091932.4	ENSG00000280438	9475	AC091932.2	ENSG00000278877	17394	None	None
L1FLnI_5p15.31n	L1	L1	L1FLnI	chr5	8968916	8978692	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC091895.1	ENSG00000279635	1712	LINC02199	ENSG00000250198	70864	None	None
L1FLnI_5p15.31o	L1	L1	L1FLnI	chr5	9001982	9011287	-	coding	AC021088.1	lncRNA	ANTISENSE	ENSG00000250619	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.31p	L1	L1	L1FLnI	chr5	9268114	9278470	+	noncoding	SEMA5A	protein_coding	ANTISENSE	ENSG00000112902	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.31q	L1	L1	L1FLnI	chr5	9632812	9643146	-	noncoding	AC026787.1,TAS2R1,LINC02112	lncRNA,protein_coding,lncRNA	SENSE,SENSE,SENSE	ENSG00000248525,ENSG00000169777,ENSG00000249781	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr5:9640495-9640517	None
L1FLnI_5p15.31r	L1	L1	L1FLnI	chr5	9632822	9643146	-	noncoding	AC026787.1,TAS2R1,LINC02112	lncRNA,protein_coding,lncRNA	SENSE,SENSE,SENSE	ENSG00000248525,ENSG00000169777,ENSG00000249781	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr5:9640495-9640517	None
L1FLnI_5p15.31s	L1	L1	L1FLnI	chr5	9768283	9780062	-	noncoding	LINC02112	lncRNA	SENSE	ENSG00000249781	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.31t	L1	L1	L1FLnI	chr5	9799424	9808370	+	noncoding	LINC02112,AC091838.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000249781,ENSG00000286556	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.2a	L1	L1	L1FLnI	chr5	9987260	9997380	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02112	ENSG00000249781	83408	AC091905.2	ENSG00000279011	60122	None	None
L1FLnI_5p15.2b	L1	L1	L1FLnI	chr5	10010566	10020680	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091905.2	ENSG00000279011	36822	LINC02112	ENSG00000249781	106714	None	None
L1FLnI_5p15.2c	L1	L1	L1FLnI	chr5	10173898	10184269	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC034229.5	ENSG00000280368	2684	AC034229.2	ENSG00000260515	10852	None	None
L1FLnI_5p15.2d	L1	L1	L1FLnI	chr5	10808434	10818604	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC012629.1	ENSG00000250576	31372	CTNND2	ENSG00000169862	153232	None	None
L1FLnI_5p15.2e	L1	L1	L1FLnI	chr5	10818838	10828209	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTNND2	ENSG00000169862	143627	AC012629.1	ENSG00000250576	41776	None	None
L1FLnI_5p15.2f	L1	L1	L1FLnI	chr5	11666271	11676542	-	noncoding	CTNND2	protein_coding	SENSE	ENSG00000169862	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.2g	L1	L1	L1FLnI	chr5	11750732	11759580	-	noncoding	CTNND2	protein_coding	SENSE	ENSG00000169862	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.2h	L1	L1	L1FLnI	chr5	12032537	12042978	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTNND2	ENSG00000169862	128091	RNU6-679P	ENSG00000212305	254421	None	None
L1FLnI_5p15.2i	L1	L1	L1FLnI	chr5	12128306	12138832	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTNND2	ENSG00000169862	223860	RNU6-679P	ENSG00000212305	158567	None	None
L1FLnI_5p15.2j	L1	L1	L1FLnI	chr5	12149726	12160148	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CTNND2	ENSG00000169862	245280	RNU6-679P	ENSG00000212305	137251	None	None
L1FLnI_5p15.2k	L1	L1	L1FLnI	chr5	12408912	12417510	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC106771.1	ENSG00000248783	136380	RNU6-679P	ENSG00000212305	111408	None	None
L1FLnI_5p15.2l	L1	L1	L1FLnI	chr5	12463726	12474415	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-679P	ENSG00000212305	166222	AC106771.1	ENSG00000248783	79475	None	None
L1FLnI_5p15.2m	L1	L1	L1FLnI	chr5	12616832	12627378	-	noncoding	LINC01194	lncRNA	ANTISENSE	ENSG00000248131	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:12624955-12624973,chr5:12624992-12625018
L1FLnI_5p15.2n	L1	L1	L1FLnI	chr5	12616892	12627378	-	noncoding	LINC01194	lncRNA	ANTISENSE	ENSG00000248131	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:12624955-12624973,chr5:12624992-12625018
L1FLnI_5p15.2o	L1	L1	L1FLnI	chr5	12820695	12830517	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02220	ENSG00000248457	83551	LINC01194	ENSG00000248131	16332	None	None
L1FLnI_5p15.2p	L1	L1	L1FLnI	chr5	13412999	13423025	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS23P5	ENSG00000242608	162337	NENFP3	ENSG00000248462	130629	None	None
L1FLnI_5p15.2q	L1	L1	L1FLnI	chr5	13610230	13619871	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NENFP3	ENSG00000248462	56264	AC016546.1	ENSG00000243744	18048	None	None
L1FLnI_5p15.2r	L1	L1	L1FLnI	chr5	13966663	13976365	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRIO	ENSG00000038382	166977	DNAH5	ENSG00000039139	22120	None	None
L1FLnI_5p15.2s	L1	L1	L1FLnI	chr5	13967150	13976365	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRIO	ENSG00000038382	166977	DNAH5	ENSG00000039139	22607	None	None
L1FLnI_5p15.1a	L1	L1	L1FLnI	chr5	15049898	15058832	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC016651.1	ENSG00000202269	51954	AC016575.2	ENSG00000286441	56937	None	None
L1FLnI_5p15.1b	L1	L1	L1FLnI	chr5	15126057	15136772	-	noncoding	LINC02149	lncRNA	SENSE	ENSG00000249332	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.1c	L1	L1	L1FLnI	chr5	15169966	15179456	+	noncoding	LINC02149	lncRNA	ANTISENSE	ENSG00000249332	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.1d	L1	L1	L1FLnI	chr5	15267913	15277931	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02149	ENSG00000249332	1372	MARK2P5	ENSG00000248834	106289	None	None
L1FLnI_5p15.1e	L1	L1	L1FLnI	chr5	15288432	15298600	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02149	ENSG00000249332	21891	MARK2P5	ENSG00000248834	85620	None	None
L1FLnI_5p15.1f	L1	L1	L1FLnI	chr5	15288432	15298589	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02149	ENSG00000249332	21891	MARK2P5	ENSG00000248834	85631	None	None
L1FLnI_5p15.1g	L1	L1	L1FLnI	chr5	15352600	15362759	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02149	ENSG00000249332	86059	MARK2P5	ENSG00000248834	21461	None	None
L1FLnI_5p15.1h	L1	L1	L1FLnI	chr5	15458158	15467483	-	noncoding	AC114964.2	lncRNA	ANTISENSE	ENSG00000286377	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.1i	L1	L1	L1FLnI	chr5	15867197	15876911	+	coding	FBXL7	protein_coding	SENSE	ENSG00000183580	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.1j	L1	L1	L1FLnI	chr5	15906017	15916050	-	coding	FBXL7	protein_coding	ANTISENSE	ENSG00000183580	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.1k	L1	L1	L1FLnI	chr5	16194174	16203104	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NACAP6	ENSG00000248403	1465	LINC02150	ENSG00000248150	170257	None	None
L1FLnI_5p15.1l	L1	L1	L1FLnI	chr5	16331912	16341940	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NACAP6	ENSG00000248403	139203	LINC02150	ENSG00000248150	31421	None	None
L1FLnI_5p15.1m	L1	L1	L1FLnI	chr5	16394500	16404586	-	noncoding	LINC02150	lncRNA	SENSE	ENSG00000248150	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.1n	L1	L1	L1FLnI	chr5	16632170	16642253	-	coding	AC024588.1	lncRNA	ANTISENSE	ENSG00000246214	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.1o	L1	L1	L1FLnI	chr5	17457533	17467955	-	noncoding	LINC02218	protein_coding	ANTISENSE	ENSG00000249662	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.1p	L1	L1	L1FLnI	chr5	17457533	17466701	-	noncoding	LINC02218	protein_coding	ANTISENSE	ENSG00000249662	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.1q	L1	L1	L1FLnI	chr5	17749102	17759256	-	coding	LINC02223	lncRNA	ANTISENSE	ENSG00000249937	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p15.1r	L1	L1	L1FLnI	chr5	18115485	18125950	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL36AP21	ENSG00000240785	65613	AC091857.1	ENSG00000212278	110173	None	None
L1FLnI_5p15.1s	L1	L1	L1FLnI	chr5	18116671	18125950	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL36AP21	ENSG00000240785	66799	AC091857.1	ENSG00000212278	110173	None	None
L1FLnI_5p14.3a	L1	L1	L1FLnI	chr5	18468318	18478334	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC091857.1	ENSG00000212278	232122	RN7SL58P	ENSG00000241552	68978	None	None
L1FLnI_5p14.3b	L1	L1	L1FLnI	chr5	18648399	18657450	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02100	ENSG00000248693	46983	RN7SL58P	ENSG00000241552	100794	None	None
L1FLnI_5p14.3c	L1	L1	L1FLnI	chr5	18648519	18657330	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02100	ENSG00000248693	47103	RN7SL58P	ENSG00000241552	100914	None	None
L1FLnI_5p14.3d	L1	L1	L1FLnI	chr5	18943457	18952286	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC114981.1	ENSG00000249285	33914	AC114981.2	ENSG00000276764	5861	None	None
L1FLnI_5p14.3e	L1	L1	L1FLnI	chr5	19157838	19167860	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC106744.1	ENSG00000249174	15492	HSPD1P15	ENSG00000249557	65506	None	None
L1FLnI_5p14.3f	L1	L1	L1FLnI	chr5	19206476	19215292	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC106744.1	ENSG00000249174	64130	HSPD1P15	ENSG00000249557	18074	None	None
L1FLnI_5p14.3g	L1	L1	L1FLnI	chr5	19820687	19829254	+	noncoding	CDH18	protein_coding	ANTISENSE	ENSG00000145526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p14.3h	L1	L1	L1FLnI	chr5	20199364	20207903	+	noncoding	CDH18	protein_coding	ANTISENSE	ENSG00000145526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p14.3i	L1	L1	L1FLnI	chr5	20522566	20532403	+	noncoding	CDH18	protein_coding	ANTISENSE	ENSG00000145526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p14.3j	L1	L1	L1FLnI	chr5	20868738	20878520	+	noncoding	LINC02241	lncRNA	SENSE	ENSG00000251629	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p14.3k	L1	L1	L1FLnI	chr5	20868738	20877815	+	noncoding	LINC02241	lncRNA	SENSE	ENSG00000251629	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p14.3l	L1	L1	L1FLnI	chr5	20986115	20995086	+	noncoding	AC140168.1	lncRNA	ANTISENSE	ENSG00000286751	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_5p14.3	L1	L1	L1ORF2	chr5	21106411	21114457	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC140168.1	ENSG00000286751	73566	AC140172.1	ENSG00000248286	82263	None	None
L1FLnI_5p14.3m	L1	L1	L1FLnI	chr5	21221832	21231907	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC140172.1	ENSG00000248286	24972	AC093274.1	ENSG00000249359	91966	None	None
L1FLnI_5p14.3n	L1	L1	L1FLnI	chr5	22034193	22043110	+	noncoding	CDH12	protein_coding	ANTISENSE	ENSG00000154162	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p14.3o	L1	L1	L1FLnI	chr5	22621853	22632103	+	noncoding	CDH12	protein_coding	ANTISENSE	ENSG00000154162	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p14.3p	L1	L1	L1FLnI	chr5	23139981	23150368	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010460.3	ENSG00000250319	111791	AC010445.1	ENSG00000249404	125454	None	None
L1FLnI_5p14.3q	L1	L1	L1FLnI	chr5	23182654	23192693	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010445.1	ENSG00000249404	168127	AC010460.3	ENSG00000250319	69466	None	None
L1FLnI_5p14.2a	L1	L1	L1FLnI	chr5	23826838	23837689	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108103.1	ENSG00000249607	137452	C5orf17	ENSG00000248874	113659	None	None
L1FLnI_5p14.2b	L1	L1	L1FLnI	chr5	24019084	24029612	+	noncoding	C5orf17	lncRNA	SENSE	ENSG00000248874	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p14.2c	L1	L1	L1FLnI	chr5	24150654	24162076	+	coding	C5orf17,AC114930.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000248874,ENSG00000286134	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:24155672-24156049	chr5:24160698-24160722
L1FLnI_5p14.1a	L1	L1	L1FLnI	chr5	24654223	24664395	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC091893.2	ENSG00000286454	64984	CDH10	ENSG00000040731	9245	None	None
L1FLnI_5p14.1b	L1	L1	L1FLnI	chr5	25077155	25087185	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02228	ENSG00000251273	265	AC106821.1	ENSG00000199911	166460	None	None
L1FLnI_5p14.1c	L1	L1	L1FLnI	chr5	25113239	25123254	-	coding	LINC02228	lncRNA	SENSE	ENSG00000251273	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p14.1d	L1	L1	L1FLnI	chr5	25359250	25368223	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC106754.2	ENSG00000279671	9177	AC022140.1	ENSG00000248605	36510	None	None
L1FLnI_5p14.1e	L1	L1	L1FLnI	chr5	25378031	25388056	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC022140.1	ENSG00000248605	16677	AC106754.2	ENSG00000279671	27958	None	None
L1FLnI_5p14.1f	L1	L1	L1FLnI	chr5	25649697	25658578	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-374P	ENSG00000201016	42639	AC022140.1	ENSG00000248605	203772	chr5:25649781-25649862	chr5:25649780-25649802
L1FLnI_5p14.1g	L1	L1	L1FLnI	chr5	26144813	26155136	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU4-43P	ENSG00000222560	131788	AC025475.1	ENSG00000249099	227383	None	None
L1FLnI_5p14.1h	L1	L1	L1FLnI	chr5	26472550	26482563	+	coding	AC025475.2	lncRNA	ANTISENSE	ENSG00000286204	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p14.1i	L1	L1	L1FLnI	chr5	26809063	26819423	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113347.4	ENSG00000251033	59066	CDH9	ENSG00000113100	61174	None	None
L1FLnI_5p14.1j	L1	L1	L1FLnI	chr5	27068813	27079034	+	noncoding	CDH9	protein_coding	ANTISENSE	ENSG00000113100	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p14.1k	L1	L1	L1FLnI	chr5	27883392	27893522	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093300.1	ENSG00000250079	319837	PURPL	ENSG00000250337	386398	None	None
L1FLnI_5p14.1l	L1	L1	L1FLnI	chr5	27957947	27967972	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093300.1	ENSG00000250079	245387	PURPL	ENSG00000250337	460953	chr5:27962261-27962484	None
L1FLnI_5p14.1m	L1	L1	L1FLnI	chr5	27957947	27967192	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093300.1	ENSG00000250079	246167	PURPL	ENSG00000250337	460953	chr5:27962261-27962484	None
L1FLnI_5p14.1n	L1	L1	L1FLnI	chr5	28327676	28337608	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008825.1	ENSG00000250453	210527	LINC02103	ENSG00000249785	39869	None	None
L1FLnI_5p14.1o	L1	L1	L1FLnI	chr5	28550881	28561207	-	noncoding	AC008825.1	lncRNA	SENSE	ENSG00000250453	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p14.1p	L1	L1	L1FLnI	chr5	28550881	28560271	-	noncoding	AC008825.1	lncRNA	SENSE	ENSG00000250453	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p14.1q	L1	L1	L1FLnI	chr5	28571587	28582017	+	noncoding	AC008825.1	lncRNA	ANTISENSE	ENSG00000250453	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:28571851-28571861,chr5:28571867-28571871,chr5:28571906-28571916
L1FLnI_5p14.1r	L1	L1	L1FLnI	chr5	28572561	28582017	+	noncoding	AC008825.1	lncRNA	ANTISENSE	ENSG00000250453	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p14.1s	L1	L1	L1FLnI	chr5	28795292	28805314	+	coding	AC008825.1	lncRNA	ANTISENSE	ENSG00000250453	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.3a	L1	L1	L1FLnI	chr5	28987583	28997661	+	coding	LINC02109	lncRNA	SENSE	ENSG00000259786	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.3b	L1	L1	L1FLnI	chr5	29107423	29116583	-	noncoding	LINC02109	lncRNA	ANTISENSE	ENSG00000259786	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.3c	L1	L1	L1FLnI	chr5	29186069	29194759	-	coding	LINC02109	lncRNA	ANTISENSE	ENSG00000259786	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.3d	L1	L1	L1FLnI	chr5	29186095	29194759	-	coding	LINC02109	lncRNA	ANTISENSE	ENSG00000259786	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.3e	L1	L1	L1FLnI	chr5	29266551	29276931	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC112172.2	ENSG00000286182	611	LINC02064	ENSG00000248391	27374	None	None
L1FLnI_5p13.3f	L1	L1	L1FLnI	chr5	29402634	29412076	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02064	ENSG00000248391	6539	AC027345.1	ENSG00000276098	103929	None	None
L1FLnI_5p13.3g	L1	L1	L1FLnI	chr5	29494188	29503181	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027345.1	ENSG00000276098	12824	LINC02064	ENSG00000248391	98093	None	None
L1FLnI_5p13.3h	L1	L1	L1FLnI	chr5	29535669	29545799	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	UBL5P1	ENSG00000248418	54877	AC027345.1	ENSG00000276098	19165	None	None
L1FLnI_5p13.3i	L1	L1	L1FLnI	chr5	29733575	29742140	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBL5P1	ENSG00000248418	132707	AC108082.1	ENSG00000250984	53798	None	None
L1FLnI_5p13.3j	L1	L1	L1FLnI	chr5	30016769	30026865	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018765.1	ENSG00000280305	33655	HPRT1P2	ENSG00000250587	221485	None	None
L1FLnI_5p13.3k	L1	L1	L1FLnI	chr5	30016769	30025893	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018765.1	ENSG00000280305	33655	HPRT1P2	ENSG00000250587	222457	None	None
L1FLnI_5p13.3l	L1	L1	L1FLnI	chr5	30358548	30368884	-	coding	AC114300.1	processed_pseudogene	SENSE	ENSG00000250118	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.3m	L1	L1	L1FLnI	chr5	30422879	30433007	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC099517.1	ENSG00000287176	112170	AC114300.1	ENSG00000250118	57195	None	None
L1FLnI_5p13.3n	L1	L1	L1FLnI	chr5	30537702	30546329	+	noncoding	AC099517.1	lncRNA	ANTISENSE	ENSG00000287176	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.3o	L1	L1	L1FLnI	chr5	30771644	30782045	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026433.1	ENSG00000287940	27940	RPL19P11	ENSG00000241668	271520	None	None
L1FLnI_5p13.3p	L1	L1	L1FLnI	chr5	30817471	30827496	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL19P11	ENSG00000241668	226069	AC026433.1	ENSG00000287940	73767	None	None
L1FLnI_5p13.3q	L1	L1	L1FLnI	chr5	30944259	30954630	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026433.1	ENSG00000287940	200555	RPL19P11	ENSG00000241668	98935	None	None
L1FLnI_5p13.3r	L1	L1	L1FLnI	chr5	32791208	32801737	+	noncoding	NPR3	protein_coding	SENSE	ENSG00000113389	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr5:32791953-32791957
L1FLnI_5p13.3s	L1	L1	L1FLnI	chr5	32791208	32800084	+	noncoding	NPR3	protein_coding	SENSE	ENSG00000113389	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr5:32791953-32791957
L1FLnI_5p13.3t	L1	L1	L1FLnI	chr5	32892359	32902828	-	coding	AC010343.3	lncRNA	SENSE	ENSG00000250697	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:32892540-32892761	None
L1FLnI_5p13.3u	L1	L1	L1FLnI	chr5	33095405	33105547	-	coding	AC010343.3	lncRNA	SENSE	ENSG00000250697	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.3v	L1	L1	L1FLnI	chr5	33118872	33128895	+	coding	AC010343.3	lncRNA	ANTISENSE	ENSG00000250697	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:33119071-33119072
L1FLnI_5p13.3w	L1	L1	L1FLnI	chr5	33132990	33141895	-	noncoding	AC010343.3	lncRNA	SENSE	ENSG00000250697	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.3x	L1	L1	L1FLnI	chr5	33132990	33141896	-	noncoding	AC010343.3	lncRNA	SENSE	ENSG00000250697	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.3y	L1	L1	L1FLnI	chr5	33347668	33357786	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025472.1	ENSG00000288579	9393	AC010343.3	ENSG00000250697	49602	None	None
L1FLnI_5p13.3z	L1	L1	L1FLnI	chr5	33385191	33395366	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025472.1	ENSG00000288579	16413	AC034231.1	ENSG00000249572	28659	None	None
L1FLnI_5p13.3aa	L1	L1	L1FLnI	chr5	33536330	33546521	+	noncoding	ADAMTS12	protein_coding	ANTISENSE	ENSG00000151388	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.3ba	L1	L1	L1FLnI	chr5	33565157	33575261	+	coding	ADAMTS12	protein_coding	ANTISENSE	ENSG00000151388	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.2a	L1	L1	L1FLnI	chr5	33855215	33864635	+	noncoding	ADAMTS12	protein_coding	ANTISENSE	ENSG00000151388	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.2b	L1	L1	L1FLnI	chr5	34144347	34154369	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	C1QTNF3-AMACR	ENSG00000273294	19819	AC139792.1	ENSG00000271771	3752	None	None
L1FLnI_5p13.2c	L1	L1	L1FLnI	chr5	34327195	34336967	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138853.1	ENSG00000249380	36061	AC138409.3	ENSG00000286543	38440	None	None
L1FLnI_5p13.2d	L1	L1	L1FLnI	chr5	34327900	34336967	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138853.1	ENSG00000249380	36061	AC138409.3	ENSG00000286543	39145	None	None
L1FLnI_5p13.2e	L1	L1	L1FLnI	chr5	34428262	34438420	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC025754.2	ENSG00000271874	213037	AC138853.1	ENSG00000249380	54412	None	None
L1FLnI_5p13.2f	L1	L1	L1FLnI	chr5	34428269	34438420	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC025754.2	ENSG00000271874	213037	AC138853.1	ENSG00000249380	54419	None	None
L1FLnI_5p13.2g	L1	L1	L1FLnI	chr5	34442893	34451752	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC025754.2	ENSG00000271874	199705	AC138853.1	ENSG00000249380	69043	None	None
L1FLnI_5p13.2h	L1	L1	L1FLnI	chr5	34465296	34474300	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138853.1	ENSG00000249380	91446	AC025754.2	ENSG00000271874	177157	None	None
L1FLnI_5p13.2i	L1	L1	L1FLnI	chr5	34640188	34650340	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC025754.2	ENSG00000271874	1117	AC138853.1	ENSG00000249380	266338	None	None
L1FLnI_5p13.2j	L1	L1	L1FLnI	chr5	35014140	35023236	+	coding	AGXT2	protein_coding	ANTISENSE	ENSG00000113492	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.2k	L1	L1	L1FLnI	chr5	35071574	35081701	+	noncoding	PRLR,AC010368.1	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000113494,ENSG00000250886	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.2l	L1	L1	L1FLnI	chr5	35100757	35110875	+	noncoding	PRLR	protein_coding	ANTISENSE	ENSG00000113494	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.2m	L1	L1	L1FLnI	chr5	35255560	35265586	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC027347.1	ENSG00000201368	163478	PRLR	ENSG00000113494	25073	None	None
L1FLnI_5p13.2n	L1	L1	L1FLnI	chr5	35320275	35330987	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PRLR	ENSG00000113494	89788	AC027347.1	ENSG00000201368	98077	None	None
L1FLnI_5p13.2o	L1	L1	L1FLnI	chr5	35347554	35358006	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027347.1	ENSG00000201368	71058	PRLR	ENSG00000113494	117067	None	None
L1FLnI_5p13.2p	L1	L1	L1FLnI	chr5	35380764	35390783	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRLR	ENSG00000113494	150277	AC027347.1	ENSG00000201368	38281	chr5:35383146-35383315	None
L1FLnI_5p13.2q	L1	L1	L1FLnI	chr5	35392599	35402735	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PRLR	ENSG00000113494	162112	AC027347.1	ENSG00000201368	26329	chr5:35393879-35394187	None
L1FLnI_5p13.2r	L1	L1	L1FLnI	chr5	35490686	35500899	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC027347.1	ENSG00000201368	61409	SPEF2	ENSG00000152582	116945	None	None
L1FLnI_5p13.2s	L1	L1	L1FLnI	chr5	35567727	35577746	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SPEF2	ENSG00000152582	40098	AC027347.1	ENSG00000201368	138450	None	None
L1FLnI_5p13.2t	L1	L1	L1FLnI	chr5	35741290	35751967	+	coding	SPEF2,AC137810.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000152582,ENSG00000248969	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.2u	L1	L1	L1FLnI	chr5	35908241	35918376	+	coding	CAPSL	protein_coding	ANTISENSE	ENSG00000152611	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.2v	L1	L1	L1FLnI	chr5	36183765	36193866	-	noncoding	SKP2,NADK2	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000145604,ENSG00000152620	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr5:36193472-36193473,chr5:36193560-36193575
L1FLnI_5p13.2w	L1	L1	L1FLnI	chr5	36461470	36471962	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114277.1	ENSG00000287634	114313	RNA5SP181	ENSG00000222178	13381	None	None
L1FLnI_5p13.2x	L1	L1	L1FLnI	chr5	36504523	36514670	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP181	ENSG00000222178	19083	AC010631.1	ENSG00000242292	73836	None	None
L1FLnI_5p13.2y	L1	L1	L1FLnI	chr5	36845008	36853921	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC008957.1	ENSG00000250155	119813	AC026741.1	ENSG00000272103	7815	None	None
L1FLnI_5p13.2z	L1	L1	L1FLnI	chr5	37519006	37529137	+	coding	WDR70	protein_coding	SENSE	ENSG00000082068	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.2aa	L1	L1	L1FLnI	chr5	37528139	37536813	-	noncoding	WDR70	protein_coding	ANTISENSE	ENSG00000082068	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.2ba	L1	L1	L1FLnI	chr5	37642065	37651366	-	noncoding	WDR70	protein_coding	ANTISENSE	ENSG00000082068	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.2ca	L1	L1	L1FLnI	chr5	37650466	37660953	-	coding	WDR70	protein_coding	ANTISENSE	ENSG00000082068	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.2da	L1	L1	L1FLnI	chr5	37673742	37683491	-	coding	WDR70	protein_coding	ANTISENSE	ENSG00000082068	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.2ea	L1	L1	L1FLnI	chr5	37679494	37689552	-	noncoding	WDR70	protein_coding	ANTISENSE	ENSG00000082068	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.2fa	L1	L1	L1FLnI	chr5	37685215	37695347	+	noncoding	WDR70	protein_coding	SENSE	ENSG00000082068	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.2ga	L1	L1	L1FLnI	chr5	37685215	37695340	+	noncoding	WDR70	protein_coding	SENSE	ENSG00000082068	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.2ha	L1	L1	L1FLnI	chr5	38168998	38179029	-	coding	LINC02119	lncRNA	ANTISENSE	ENSG00000248461	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.1a	L1	L1	L1FLnI	chr5	38625101	38635247	-	coding	LIFR-AS1	lncRNA	ANTISENSE	ENSG00000244968	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.1b	L1	L1	L1FLnI	chr5	39030831	39040976	+	coding	RICTOR	protein_coding	ANTISENSE	ENSG00000164327	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.1c	L1	L1	L1FLnI	chr5	39275246	39285386	-	coding	C9	protein_coding	SENSE	ENSG00000113600	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr5:39284649-39284652,chr5:39285030-39285039
L1FLnI_5p13.1d	L1	L1	L1FLnI	chr5	39339561	39349681	+	coding	C9	protein_coding	ANTISENSE	ENSG00000113600	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr5:39343056-39343196	chr5:39341201-39341217
L1FLnI_5p13.1e	L1	L1	L1FLnI	chr5	39592734	39602992	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	INTS6P1	ENSG00000250492	115992	CCDC11P1	ENSG00000251515	20095	None	None
L1FLnI_5p13.1f	L1	L1	L1FLnI	chr5	39682022	39692112	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	INTS6P1	ENSG00000250492	26872	CCDC11P1	ENSG00000251515	109383	None	None
L1FLI_5p13.1	L1	L1	L1FLI	chr5	39786649	39794702	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	INTS6P1	ENSG00000250492	65136	GCSHP1	ENSG00000248651	93874	None	None
L1FLnI_5p13.1g	L1	L1	L1FLnI	chr5	40124583	40135006	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00604	ENSG00000250585	105161	KRT18P56	ENSG00000249668	57383	None	None
L1FLnI_5p13.1h	L1	L1	L1FLnI	chr5	40242693	40251544	+	noncoding	LINC00604	lncRNA	SENSE	ENSG00000250585	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.1i	L1	L1	L1FLnI	chr5	40296242	40305682	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108105.1	ENSG00000287597	1142	RNU1-150P	ENSG00000199361	26523	None	None
L1FLnI_5p13.1j	L1	L1	L1FLnI	chr5	40332413	40342544	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108105.1	ENSG00000287597	19508	AC093277.1	ENSG00000283286	72593	None	None
L1FLnI_5p13.1k	L1	L1	L1FLnI	chr5	40416741	40426850	-	noncoding	AC093277.1	lncRNA	ANTISENSE	ENSG00000283286	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.1l	L1	L1	L1FLnI	chr5	40447319	40457860	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114977.1	ENSG00000285552	5702	AC093277.1	ENSG00000283286	15828	None	None
L1FLnI_5p13.1m	L1	L1	L1FLnI	chr5	40468244	40478389	-	noncoding	AC114977.1,AC114977.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000285552,ENSG00000285616	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.1n	L1	L1	L1FLnI	chr5	40537807	40547835	+	coding	TTC33	protein_coding	ANTISENSE	ENSG00000113638	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.1o	L1	L1	L1FLnI	chr5	40560901	40571020	-	coding	TTC33	protein_coding	SENSE	ENSG00000113638	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr5:40570557-40570662	None
L1FLnI_5p13.1p	L1	L1	L1FLnI	chr5	40630671	40640924	+	coding	TTC33	protein_coding	ANTISENSE	ENSG00000113638	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.1q	L1	L1	L1FLnI	chr5	41018575	41028695	+	noncoding	MROH2B	protein_coding	ANTISENSE	ENSG00000171495	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.1r	L1	L1	L1FLnI	chr5	41072779	41082928	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C6	ENSG00000039537	59306	MROH2B	ENSG00000171495	1437	None	chr5:41082329-41082339,chr5:41082376-41082378
L1FLnI_5p13.1s	L1	L1	L1FLnI	chr5	41201759	41211896	+	coding	C6	protein_coding	ANTISENSE	ENSG00000039537	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.1t	L1	L1	L1FLnI	chr5	41311970	41320992	+	noncoding	PLCXD3	protein_coding	ANTISENSE	ENSG00000182836	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.1u	L1	L1	L1FLnI	chr5	41487421	41497588	-	coding	PLCXD3	protein_coding	SENSE	ENSG00000182836	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.1v	L1	L1	L1FLnI	chr5	41491454	41500472	+	noncoding	PLCXD3	protein_coding	ANTISENSE	ENSG00000182836	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p13.1w	L1	L1	L1FLnI	chr5	41564034	41574185	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC008817.1	ENSG00000251478	11697	PLCXD3	ENSG00000182836	53406	None	None
L1FLnI_5p13.1x	L1	L1	L1FLnI	chr5	41604230	41613041	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OXCT1	ENSG00000083720	117024	AC008817.1	ENSG00000251478	16443	None	None
L1FLnI_5p13.1y	L1	L1	L1FLnI	chr5	42023915	42033422	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108099.1	ENSG00000260786	154844	MTHFD2P6	ENSG00000249266	55549	None	None
L1FLnI_5p13.1z	L1	L1	L1FLnI	chr5	42074795	42084807	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTHFD2P6	ENSG00000249266	106429	AC108099.1	ENSG00000260786	103459	None	None
L1FLnI_5p13.1aa	L1	L1	L1FLnI	chr5	42211373	42219958	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GHR	ENSG00000112964	203481	AC108099.1	ENSG00000260786	19850	None	None
L1FLnI_5p13.1ba	L1	L1	L1FLnI	chr5	42253741	42263889	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GHR	ENSG00000112964	159550	AC108099.1	ENSG00000260786	62218	None	None
L1FLnI_5p13.1ca	L1	L1	L1FLnI	chr5	42411813	42422055	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GHR	ENSG00000112964	1384	AC108099.1	ENSG00000260786	220290	None	None
L1FLnI_5p13.1da	L1	L1	L1FLnI	chr5	42476386	42486530	-	coding	GHR	protein_coding	ANTISENSE	ENSG00000112964	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p12a	L1	L1	L1FLnI	chr5	42534030	42543055	-	noncoding	GHR	protein_coding	ANTISENSE	ENSG00000112964	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p12b	L1	L1	L1FLnI	chr5	42656133	42666259	+	coding	GHR	protein_coding	SENSE	ENSG00000112964	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p12c	L1	L1	L1FLnI	chr5	42731216	42741247	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC113368.1	ENSG00000270513	1697	CCDC152	ENSG00000198865	15571	None	None
L1FLnI_5p12d	L1	L1	L1FLnI	chr5	42783100	42791797	-	noncoding	CCDC152	protein_coding	ANTISENSE	ENSG00000198865	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p12e	L1	L1	L1FLnI	chr5	42859579	42869459	+	coding	SELENOP,AC008945.2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000250722,ENSG00000286271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p12f	L1	L1	L1FLnI	chr5	42928182	42938366	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC008945.2	ENSG00000286271	3647	PRELID3BP7	ENSG00000250711	34258	None	None
L1FLnI_5p12g	L1	L1	L1FLnI	chr5	43260115	43270248	-	noncoding	NIM1K	protein_coding	ANTISENSE	ENSG00000177453	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p12h	L1	L1	L1FLnI	chr5	43322399	43332510	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC114947.1	ENSG00000188850	3654	HMGCS1	ENSG00000112972	8887	None	None
L1FLnI_5p12i	L1	L1	L1FLnI	chr5	43399050	43409147	+	coding	CCL28	protein_coding	ANTISENSE	ENSG00000151882	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p12j	L1	L1	L1FLnI	chr5	43438336	43446891	-	coding	TMEM267	protein_coding	SENSE	ENSG00000151881	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p12k	L1	L1	L1FLnI	chr5	43666777	43676922	-	coding	NNT,RPL29P12	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000112992,ENSG00000224993	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p12l	L1	L1	L1FLnI	chr5	43714455	43724474	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NNT	ENSG00000112992	7050	AC104119.1	ENSG00000249276	149893	None	None
L1FLnI_5p12m	L1	L1	L1FLnI	chr5	43788140	43798278	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NNT	ENSG00000112992	80735	AC104119.1	ENSG00000249276	76089	None	None
L1FLnI_5p12n	L1	L1	L1FLnI	chr5	43807681	43817821	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104119.1	ENSG00000249276	56546	NNT	ENSG00000112992	100276	None	None
L1FLnI_5p12o	L1	L1	L1FLnI	chr5	43935063	43943704	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104119.1	ENSG00000249276	48435	RNU6-381P	ENSG00000212561	122920	None	None
L1FLnI_5p12p	L1	L1	L1FLnI	chr5	43949409	43959422	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104119.1	ENSG00000249276	62781	RNU6-381P	ENSG00000212561	107202	None	None
L1FLnI_5p12q	L1	L1	L1FLnI	chr5	43959454	43969876	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-381P	ENSG00000212561	96748	AC104119.1	ENSG00000249276	72826	None	None
L1FLnI_5p12r	L1	L1	L1FLnI	chr5	43975353	43985664	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-381P	ENSG00000212561	80960	AC104119.1	ENSG00000249276	88725	None	None
L1FLnI_5p12s	L1	L1	L1FLnI	chr5	44010307	44020378	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104119.1	ENSG00000249276	123679	RNU6-381P	ENSG00000212561	46246	None	None
L1FLnI_5p12t	L1	L1	L1FLnI	chr5	44010307	44020368	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104119.1	ENSG00000249276	123679	RNU6-381P	ENSG00000212561	46256	None	None
L1FLnI_5p12u	L1	L1	L1FLnI	chr5	44059391	44068851	-	coding	RNU6-381P	snRNA	SENSE	ENSG00000212561	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p12v	L1	L1	L1FLnI	chr5	44103818	44112516	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FGF10	ENSG00000070193	187731	RNU6-381P	ENSG00000212561	37087	chr5:44108581-44108603	None
L1FLnI_5p12w	L1	L1	L1FLnI	chr5	44201233	44210273	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FGF10	ENSG00000070193	89974	RNU6-381P	ENSG00000212561	134502	None	None
L1FLnI_5p12x	L1	L1	L1FLnI	chr5	44575446	44585455	+	coding	LINC02224	lncRNA	ANTISENSE	ENSG00000249203	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p12y	L1	L1	L1FLnI	chr5	44665004	44675029	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02224	ENSG00000249203	6435	AC093292.1	ENSG00000250418	23402	None	None
L1FLnI_5p12z	L1	L1	L1FLnI	chr5	44752405	44761565	+	coding	MRPS30-DT,AC093297.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000251141,ENSG00000248779	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p12aa	L1	L1	L1FLnI	chr5	45237355	45247503	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HCN1	ENSG00000164588	7445	AC116350.1	ENSG00000287540	8927	None	None
L1FLnI_5p12ba	L1	L1	L1FLnI	chr5	45237360	45247503	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HCN1	ENSG00000164588	7445	AC116350.1	ENSG00000287540	8932	None	None
L1FLnI_5p12ca	L1	L1	L1FLnI	chr5	45308882	45319071	+	coding	HCN1	protein_coding	ANTISENSE	ENSG00000164588	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p12da	L1	L1	L1FLnI	chr5	45342883	45353034	+	coding	HCN1	protein_coding	ANTISENSE	ENSG00000164588	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p12ea	L1	L1	L1FLnI	chr5	45493101	45503115	-	coding	HCN1	protein_coding	SENSE	ENSG00000164588	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p12fa	L1	L1	L1FLnI	chr5	45580038	45590172	-	coding	HCN1	protein_coding	SENSE	ENSG00000164588	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_5p12	L1	L1	L1ORF2	chr5	45657440	45665484	+	coding	HCN1	protein_coding	ANTISENSE	ENSG00000164588	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5p12ga	L1	L1	L1FLnI	chr5	45742576	45752694	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC122694.1	ENSG00000250122	137522	HCN1	ENSG00000164588	46078	None	None
L1FLnI_5p12ha	L1	L1	L1FLnI	chr5	45782646	45792792	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HCN1	ENSG00000164588	86148	AC122694.1	ENSG00000250122	97424	None	None
L1FLnI_5p12ia	L1	L1	L1FLnI	chr5	45832362	45842345	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC122694.1	ENSG00000250122	47871	HCN1	ENSG00000164588	135864	None	None
L1FLnI_5p12ja	L1	L1	L1FLnI	chr5	45844001	45854513	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HCN1	ENSG00000164588	147503	AC122694.1	ENSG00000250122	35703	None	None
L1FLnI_5p12ka	L1	L1	L1FLnI	chr5	45844001	45854500	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HCN1	ENSG00000164588	147503	AC122694.1	ENSG00000250122	35716	None	None
L1FLnI_5p12la	L1	L1	L1FLnI	chr5	45921275	45930243	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	EMB	ENSG00000170571	4465949	AC122694.1	ENSG00000250122	25305	None	None
L1FLnI_5p11a	L1	L1	L1FLnI	chr5	46105776	46115858	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EMB	ENSG00000170571	4280334	AC122694.1	ENSG00000250122	209806	None	None
L1FLnI_5p11b	L1	L1	L1FLnI	chr5	46127402	46137497	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC122694.1	ENSG00000250122	231432	EMB	ENSG00000170571	4258695	None	None
L1FLnI_5p11c	L1	L1	L1FLnI	chr5	46189926	46199942	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC122694.1	ENSG00000250122	293956	EMB	ENSG00000170571	4196250	None	None
L1FLnI_5p11d	L1	L1	L1FLnI	chr5	46309958	46318875	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC122694.1	ENSG00000250122	413988	EMB	ENSG00000170571	4077317	None	None
L1FLnI_5p11e	L1	L1	L1FLnI	chr5	46367874	46377890	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC122694.1	ENSG00000250122	471904	EMB	ENSG00000170571	4018302	None	None
L1FLnI_5q11.1a	L1	L1	L1FLnI	chr5	50152653	50161579	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC122694.1	ENSG00000250122	4256683	EMB	ENSG00000170571	234613	None	None
L1FLnI_5q11.1b	L1	L1	L1FLnI	chr5	50168298	50178463	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EMB	ENSG00000170571	217729	AC122694.1	ENSG00000250122	4272328	None	None
L1FLnI_5q11.1c	L1	L1	L1FLnI	chr5	50256488	50266623	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	EMB	ENSG00000170571	129569	AC122694.1	ENSG00000250122	4360518	None	None
L1FLnI_5q11.1d	L1	L1	L1FLnI	chr5	50276729	50286751	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC122694.1	ENSG00000250122	4380759	EMB	ENSG00000170571	109441	None	None
L1FLnI_5q11.1e	L1	L1	L1FLnI	chr5	50326571	50336736	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC122694.1	ENSG00000250122	4430601	EMB	ENSG00000170571	59456	None	None
L1FLnI_5q11.1f	L1	L1	L1FLnI	chr5	50383407	50393619	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC122694.1	ENSG00000250122	4487437	EMB	ENSG00000170571	2573	None	None
L1FLnI_5q11.1g	L1	L1	L1FLnI	chr5	50452488	50462508	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC112187.2	ENSG00000271455	140721	EMB	ENSG00000170571	9240	None	None
L1FLnI_5q11.1h	L1	L1	L1FLnI	chr5	50483499	50493636	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC112187.2	ENSG00000271455	109593	EMB	ENSG00000170571	40251	None	None
L1FLnI_5q11.1i	L1	L1	L1FLnI	chr5	50491686	50501235	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EMB	ENSG00000170571	48438	AC112187.2	ENSG00000271455	101994	None	None
L1FLnI_5q11.1j	L1	L1	L1FLnI	chr5	50537564	50547722	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	EMB	ENSG00000170571	94316	AC112187.2	ENSG00000271455	55507	None	None
L1FLnI_5q11.1k	L1	L1	L1FLnI	chr5	50563689	50572847	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EMB	ENSG00000170571	120441	AC112187.2	ENSG00000271455	30382	None	chr5:50564792-50564797
L1FLnI_5q11.1l	L1	L1	L1FLnI	chr5	50595611	50605773	-	coding	AC112187.2	processed_pseudogene	ANTISENSE	ENSG00000271455	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q11.1m	L1	L1	L1FLnI	chr5	51059802	51070006	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-480P	ENSG00000207060	4343	AC091834.1	ENSG00000278734	31166	None	None
L1FLnI_5q11.1n	L1	L1	L1FLnI	chr5	51247248	51257270	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1296P	ENSG00000206606	79601	AC026798.1	ENSG00000240627	17983	None	None
L1FLnI_5q11.1o	L1	L1	L1FLnI	chr5	51300992	51311141	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC026798.1	ENSG00000240627	25258	AC010478.1	ENSG00000259663	61595	None	None
L1FLnI_5q11.1p	L1	L1	L1FLnI	chr5	51330284	51339496	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC010478.1	ENSG00000259663	33240	AC026798.1	ENSG00000240627	54550	None	None
L1FLnI_5q11.1q	L1	L1	L1FLnI	chr5	51345169	51355322	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC026798.1	ENSG00000240627	69435	AC010478.1	ENSG00000259663	17414	None	None
L1FLnI_5q11.2a	L1	L1	L1FLnI	chr5	51633273	51643271	+	coding	AC022433.1	lncRNA	ANTISENSE	ENSG00000288035	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q11.2b	L1	L1	L1FLnI	chr5	51784650	51794798	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP182	ENSG00000251873	91890	AC022433.1	ENSG00000288035	119602	None	None
L1FLnI_5q11.2c	L1	L1	L1FLnI	chr5	51948245	51958347	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	KATNBL1P4	ENSG00000249270	16209	AC091903.1	ENSG00000279470	5645	None	None
L1FLnI_5q11.2d	L1	L1	L1FLnI	chr5	51948245	51958334	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	KATNBL1P4	ENSG00000249270	16209	AC091903.1	ENSG00000279470	5658	None	None
L1FLnI_5q11.2e	L1	L1	L1FLnI	chr5	52097426	52106441	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS17P11	ENSG00000244621	176126	LINC02118	ENSG00000248789	16439	None	None
L1FLnI_5q11.2f	L1	L1	L1FLnI	chr5	52152846	52163367	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02118	ENSG00000248789	71859	RPS17P11	ENSG00000244621	119200	None	None
L1FLnI_5q11.2g	L1	L1	L1FLnI	chr5	52530361	52539883	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS17P11	ENSG00000244621	247502	MFSD4BP1	ENSG00000250827	39672	None	None
L1FLnI_5q11.2h	L1	L1	L1FLnI	chr5	52676211	52686569	-	noncoding	AC022126.1	lncRNA	SENSE	ENSG00000248898	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q11.2i	L1	L1	L1FLnI	chr5	52715000	52724429	+	coding	AC022126.1	lncRNA	ANTISENSE	ENSG00000248898	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q11.2j	L1	L1	L1FLnI	chr5	52965295	52974167	-	noncoding	AC025180.1	lncRNA	SENSE	ENSG00000249899	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q11.2k	L1	L1	L1FLnI	chr5	52970166	52980301	-	noncoding	AC025180.1	lncRNA	SENSE	ENSG00000249899	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q11.2l	L1	L1	L1FLnI	chr5	53011996	53021203	-	noncoding	ITGA2	protein_coding	ANTISENSE	ENSG00000164171	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q11.2m	L1	L1	L1FLnI	chr5	53137568	53147712	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008966.1	ENSG00000247796	9895	AC026477.1	ENSG00000213940	58849	None	None
L1FLnI_5q11.2n	L1	L1	L1FLnI	chr5	53137568	53147733	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008966.1	ENSG00000247796	9895	AC026477.1	ENSG00000213940	58828	None	None
L1FLnI_5q11.2o	L1	L1	L1FLnI	chr5	53223709	53233781	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC027329.1	ENSG00000285831	64091	AC026477.1	ENSG00000213940	16533	None	None
L1FLnI_5q11.2p	L1	L1	L1FLnI	chr5	53264535	53274652	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC026477.1	ENSG00000213940	57359	AC027329.1	ENSG00000285831	23220	None	None
L1FLnI_5q11.2q	L1	L1	L1FLnI	chr5	53304682	53313261	-	coding	AC027329.1	lncRNA	SENSE	ENSG00000285831	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q11.2r	L1	L1	L1FLnI	chr5	53491579	53500289	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FST	ENSG00000134363	4445	NDUFS4	ENSG00000164258	60344	None	None
L1FLnI_5q11.2s	L1	L1	L1FLnI	chr5	53625391	53635664	-	noncoding	NDUFS4	protein_coding	ANTISENSE	ENSG00000164258	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q11.2t	L1	L1	L1FLnI	chr5	53659507	53669471	-	noncoding	NDUFS4	protein_coding	ANTISENSE	ENSG00000164258	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q11.2u	L1	L1	L1FLnI	chr5	53699687	53709813	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02105	ENSG00000250447	66235	NDUFS4	ENSG00000164258	16349	None	None
L1FLnI_5q11.2v	L1	L1	L1FLnI	chr5	53706261	53716653	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02105	ENSG00000250447	59395	NDUFS4	ENSG00000164258	22923	None	None
L1FLnI_5q11.2w	L1	L1	L1FLnI	chr5	53712205	53722650	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFS4	ENSG00000164258	28867	LINC02105	ENSG00000250447	53398	None	None
L1FLnI_5q11.2x	L1	L1	L1FLnI	chr5	53712205	53722665	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFS4	ENSG00000164258	28867	LINC02105	ENSG00000250447	53383	None	None
L1FLnI_5q11.2y	L1	L1	L1FLnI	chr5	53735608	53745156	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFS4	ENSG00000164258	52270	LINC02105	ENSG00000250447	30892	None	None
L1FLnI_5q11.2z	L1	L1	L1FLnI	chr5	53735608	53745165	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFS4	ENSG00000164258	52270	LINC02105	ENSG00000250447	30883	None	None
L1FLnI_5q11.2aa	L1	L1	L1FLnI	chr5	53799307	53809421	+	coding	LINC02105	lncRNA	ANTISENSE	ENSG00000250447	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q11.2ba	L1	L1	L1FLnI	chr5	54330396	54339326	+	noncoding	LINC01033	lncRNA	SENSE	ENSG00000249069	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q11.2ca	L1	L1	L1FLnI	chr5	54809446	54819610	+	coding	AC112198.2	unitary_pseudogene	ANTISENSE	ENSG00000232517	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q11.2da	L1	L1	L1FLnI	chr5	54915893	54924618	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC112198.4	ENSG00000249843	37305	AC112198.3	ENSG00000249016	31617	None	None
L1FLnI_5q11.2ea	L1	L1	L1FLnI	chr5	55003156	55012457	+	noncoding	ESM1	protein_coding	ANTISENSE	ENSG00000164283	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q11.2fa	L1	L1	L1FLnI	chr5	55074862	55085002	-	coding	GZMAP1	unprocessed_pseudogene	ANTISENSE	ENSG00000249454	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q11.2ga	L1	L1	L1FLnI	chr5	55093063	55101796	+	coding	GZMAP1	unprocessed_pseudogene	SENSE	ENSG00000249454	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr5:55101660-55101819	None
L1FLnI_5q11.2ha	L1	L1	L1FLnI	chr5	55802832	55812963	-	coding	DDX4	protein_coding	ANTISENSE	ENSG00000152670	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q11.2ia	L1	L1	L1FLnI	chr5	56217868	56228000	+	coding	ANKRD55	protein_coding	ANTISENSE	ENSG00000164512	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q11.2ja	L1	L1	L1FLnI	chr5	56386072	56395025	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN1P17	ENSG00000250787	3997	LINC01948	ENSG00000248727	56602	None	None
L1FLnI_5q11.2ka	L1	L1	L1FLnI	chr5	56775816	56785935	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MAP3K1	ENSG00000095015	29614	AC008940.1	ENSG00000228650	3513	None	None
L1FLnI_5q11.2la	L1	L1	L1FLnI	chr5	57350998	57361026	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC025470.2	ENSG00000250961	34034	AC025470.1	ENSG00000248586	30978	None	None
L1ORF2_5q11.2	L1	L1	L1ORF2	chr5	57470575	57478624	-	coding	AC025470.2	lncRNA	ANTISENSE	ENSG00000250961	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q11.2ma	L1	L1	L1FLnI	chr5	57919356	57929482	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02225	ENSG00000249584	20194	LINC02101	ENSG00000248132	178149	None	None
L1FLnI_5q11.2na	L1	L1	L1FLnI	chr5	57966087	57976249	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02101	ENSG00000248132	131382	LINC02225	ENSG00000249584	66925	None	None
L1FLnI_5q11.2oa	L1	L1	L1FLnI	chr5	58099621	58109194	-	noncoding	LINC02101	lncRNA	SENSE	ENSG00000248132	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q11.2pa	L1	L1	L1FLnI	chr5	58212417	58222536	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PGAM1P1	ENSG00000248271	50665	PLK2	ENSG00000145632	231446	None	None
L1FLnI_5q11.2qa	L1	L1	L1FLnI	chr5	58284563	58294668	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PGAM1P1	ENSG00000248271	122811	PLK2	ENSG00000145632	159314	None	None
L1FLnI_5q11.2ra	L1	L1	L1FLnI	chr5	58284563	58294684	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PGAM1P1	ENSG00000248271	122811	PLK2	ENSG00000145632	159298	None	None
L1FLnI_5q11.2sa	L1	L1	L1FLnI	chr5	58371083	58379982	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PLK2	ENSG00000145632	74000	PGAM1P1	ENSG00000248271	209331	None	None
L1FLI_5q11.2	L1	L1	L1FLI	chr5	58383174	58391220	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PGAM1P1	ENSG00000248271	221422	PLK2	ENSG00000145632	62762	None	None
L1FLnI_5q11.2ta	L1	L1	L1FLnI	chr5	58511298	58521892	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008814.1	ENSG00000271257	7598	MIR548AE2	ENSG00000265699	8151	None	None
L1FLnI_5q11.2ua	L1	L1	L1FLnI	chr5	58535656	58545790	-	coding	LINC02108	lncRNA	SENSE	ENSG00000250127	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr5:58544344-58544571	chr5:58544523-58544539,chr5:58544344-58544392
L1FLnI_5q11.2va	L1	L1	L1FLnI	chr5	58551771	58561783	-	coding	LINC02108	lncRNA	SENSE	ENSG00000250127	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q11.2wa	L1	L1	L1FLnI	chr5	58569295	58579442	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02108	ENSG00000250127	11052	RAB3C	ENSG00000152932	2779	None	None
L1FLnI_5q11.2xa	L1	L1	L1FLnI	chr5	58599192	58608834	-	coding	RAB3C	protein_coding	ANTISENSE	ENSG00000152932	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q11.2ya	L1	L1	L1FLnI	chr5	58693441	58703599	-	noncoding	RAB3C	protein_coding	ANTISENSE	ENSG00000152932	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q11.2za	L1	L1	L1FLnI	chr5	58952591	58963047	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PDE4D	ENSG00000113448	5991	AC008852.1	ENSG00000248733	89177	chr5:58960072-58960404	None
L1FLnI_5q11.2ab	L1	L1	L1FLnI	chr5	59007277	59016791	+	coding	PDE4D	protein_coding	ANTISENSE	ENSG00000113448	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:59016299-59016415	chr5:59016410-59016415
L1FLnI_5q11.2bb	L1	L1	L1FLnI	chr5	59391222	59401244	+	coding	PDE4D	protein_coding	ANTISENSE	ENSG00000113448	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.1a	L1	L1	L1FLnI	chr5	59627957	59638325	+	noncoding	PDE4D	protein_coding	ANTISENSE	ENSG00000113448	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.1b	L1	L1	L1FLnI	chr5	59627957	59636944	+	noncoding	PDE4D	protein_coding	ANTISENSE	ENSG00000113448	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.1c	L1	L1	L1FLnI	chr5	59683725	59692230	+	coding	PDE4D	protein_coding	ANTISENSE	ENSG00000113448	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.1d	L1	L1	L1FLnI	chr5	60043869	60053891	-	coding	PDE4D	protein_coding	SENSE	ENSG00000113448	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.1e	L1	L1	L1FLnI	chr5	60071097	60079664	-	noncoding	PDE4D	protein_coding	SENSE	ENSG00000113448	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.1f	L1	L1	L1FLnI	chr5	60100372	60110524	+	coding	PDE4D	protein_coding	ANTISENSE	ENSG00000113448	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.1g	L1	L1	L1FLnI	chr5	60313988	60324127	-	noncoding	PDE4D	protein_coding	SENSE	ENSG00000113448	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:60323157-60323417	None
L1FLnI_5q12.1h	L1	L1	L1FLnI	chr5	60417077	60427195	+	noncoding	PDE4D	protein_coding	ANTISENSE	ENSG00000113448	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.1i	L1	L1	L1FLnI	chr5	60552107	60562146	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PART1	ENSG00000152931	3294	DEPDC1B	ENSG00000035499	34766	None	None
L1FLnI_5q12.1j	L1	L1	L1FLnI	chr5	60570289	60579607	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DEPDC1B	ENSG00000035499	17305	PART1	ENSG00000152931	21476	None	None
L1FLnI_5q12.1k	L1	L1	L1FLnI	chr5	60611661	60621793	+	coding	DEPDC1B	protein_coding	ANTISENSE	ENSG00000035499	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.1l	L1	L1	L1FLnI	chr5	60725352	60734824	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC109133.1	ENSG00000287434	23342	KRT8P31	ENSG00000250148	8739	None	None
L1FLnI_5q12.1m	L1	L1	L1FLnI	chr5	60856891	60866937	+	coding	AC104113.1	lncRNA	ANTISENSE	ENSG00000272308	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.1n	L1	L1	L1FLnI	chr5	60875390	60885502	-	noncoding	ERCC8	protein_coding	SENSE	ENSG00000049167	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.1o	L1	L1	L1FLnI	chr5	61194399	61204761	-	noncoding	SMIM15-AS1,LINC02057	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000251279,ENSG00000249279	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.1p	L1	L1	L1FLnI	chr5	61235376	61245501	+	noncoding	LINC02057	lncRNA	ANTISENSE	ENSG00000249279	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.1q	L1	L1	L1FLnI	chr5	62031177	62041616	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP157	ENSG00000251983	105049	AC008877.1	ENSG00000248199	104043	None	None
L1FLnI_5q12.1r	L1	L1	L1FLnI	chr5	62224849	62234333	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	KIF2A	ENSG00000068796	71829	RN7SKP157	ENSG00000251983	77903	None	None
L1FLnI_5q12.1s	L1	L1	L1FLnI	chr5	62652120	62661102	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	IPO11	ENSG00000086200	23538	ISCA1P1	ENSG00000217416	115775	None	None
L1FLnI_5q12.1t	L1	L1	L1FLnI	chr5	62672301	62682450	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ISCA1P1	ENSG00000217416	94427	IPO11	ENSG00000086200	43719	None	None
L1FLnI_5q12.1u	L1	L1	L1FLnI	chr5	62748940	62759020	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IPO11	ENSG00000086200	120358	ISCA1P1	ENSG00000217416	17857	None	None
L1FLnI_5q12.1v	L1	L1	L1FLnI	chr5	62798476	62808497	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC113420.1	ENSG00000249579	214422	ISCA1P1	ENSG00000217416	21213	None	None
L1FLnI_5q12.1w	L1	L1	L1FLnI	chr5	62813794	62823872	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ISCA1P1	ENSG00000217416	36531	AC113420.1	ENSG00000249579	199047	None	None
L1FLnI_5q12.1x	L1	L1	L1FLnI	chr5	62845638	62855094	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC113420.1	ENSG00000249579	167825	ISCA1P1	ENSG00000217416	68375	None	None
L1FLnI_5q12.1y	L1	L1	L1FLnI	chr5	62854764	62865239	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113420.1	ENSG00000249579	157680	ISCA1P1	ENSG00000217416	77501	None	None
L1FLnI_5q12.1z	L1	L1	L1FLnI	chr5	62859650	62869800	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ISCA1P1	ENSG00000217416	82387	AC113420.1	ENSG00000249579	153119	None	None
L1FLnI_5q12.1aa	L1	L1	L1FLnI	chr5	62890357	62900795	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113420.1	ENSG00000249579	122124	ISCA1P1	ENSG00000217416	113094	None	None
L1FLnI_5q12.1ba	L1	L1	L1FLnI	chr5	62890357	62900384	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113420.1	ENSG00000249579	122535	ISCA1P1	ENSG00000217416	113094	None	None
L1FLnI_5q12.1ca	L1	L1	L1FLnI	chr5	62981597	62990151	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ISCA1P1	ENSG00000217416	204334	AC113420.1	ENSG00000249579	32768	None	None
L1FLnI_5q12.1da	L1	L1	L1FLnI	chr5	63086683	63095255	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113420.1	ENSG00000249579	63194	AC025445.1	ENSG00000248185	206268	None	None
L1FLnI_5q12.1ea	L1	L1	L1FLnI	chr5	63372200	63382467	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025445.1	ENSG00000248185	70144	AC008558.1	ENSG00000287179	186952	None	None
L1FLnI_5q12.1fa	L1	L1	L1FLnI	chr5	63399469	63408465	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025445.1	ENSG00000248185	97413	AC008558.1	ENSG00000287179	160954	None	None
L1FLnI_5q12.1ga	L1	L1	L1FLnI	chr5	63503479	63513941	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025445.1	ENSG00000248185	201423	AC008558.1	ENSG00000287179	55478	None	None
L1FLnI_5q12.1ha	L1	L1	L1FLnI	chr5	63578298	63588433	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC008558.1	ENSG00000287179	6681	AC122707.1	ENSG00000248285	369460	None	None
L1FLnI_5q12.2a	L1	L1	L1FLnI	chr5	63664310	63673950	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008558.1	ENSG00000287179	92693	AC122707.1	ENSG00000248285	283943	None	None
L1FLnI_5q12.2b	L1	L1	L1FLnI	chr5	63676486	63685400	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC122707.1	ENSG00000248285	272493	AC008558.1	ENSG00000287179	104869	None	None
L1FLnI_5q12.3a	L1	L1	L1FLnI	chr5	63974420	63984537	-	noncoding	AC122707.1	lncRNA	SENSE	ENSG00000248285	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.3b	L1	L1	L1FLnI	chr5	64037838	64046742	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC122707.1	ENSG00000248285	56795	RNF180	ENSG00000164197	119101	None	None
L1FLnI_5q12.3c	L1	L1	L1FLnI	chr5	64037947	64046742	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC122707.1	ENSG00000248285	56904	RNF180	ENSG00000164197	119101	None	None
L1FLnI_5q12.3d	L1	L1	L1FLnI	chr5	64083688	64093827	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC122707.1	ENSG00000248285	102645	RNF180	ENSG00000164197	72016	None	None
L1FLnI_5q12.3e	L1	L1	L1FLnI	chr5	64128593	64138624	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNF180	ENSG00000164197	27219	AC122707.1	ENSG00000248285	147550	None	None
L1FLnI_5q12.3f	L1	L1	L1FLnI	chr5	64239299	64249765	+	noncoding	RNF180	protein_coding	SENSE	ENSG00000164197	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.3g	L1	L1	L1FLnI	chr5	64424077	64432652	+	noncoding	AC091862.1	unitary_pseudogene	ANTISENSE	ENSG00000236068	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.3h	L1	L1	L1FLnI	chr5	64464422	64474415	-	coding	AC091862.1	unitary_pseudogene	SENSE	ENSG00000236068	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.3i	L1	L1	L1FLnI	chr5	64473594	64483753	+	coding	AC091862.1	unitary_pseudogene	ANTISENSE	ENSG00000236068	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.3j	L1	L1	L1FLnI	chr5	64708536	64718565	-	coding	SHISAL2B,SREK1IP1	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000145642,ENSG00000153006	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.3k	L1	L1	L1FLnI	chr5	64905191	64914590	-	noncoding	CWC27	protein_coding	ANTISENSE	ENSG00000153015	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.3l	L1	L1	L1FLnI	chr5	64933592	64944076	-	coding	CWC27	protein_coding	ANTISENSE	ENSG00000153015	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.3m	L1	L1	L1FLnI	chr5	64933602	64944076	-	coding	CWC27	protein_coding	ANTISENSE	ENSG00000153015	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.3n	L1	L1	L1FLnI	chr5	64998740	65007334	-	noncoding	CWC27	protein_coding	ANTISENSE	ENSG00000153015	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.3o	L1	L1	L1FLnI	chr5	65160519	65170548	+	coding	ADAMTS6	protein_coding	ANTISENSE	ENSG00000049192	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:65163784-65164011	None
L1FLnI_5q12.3p	L1	L1	L1FLnI	chr5	65366764	65376773	+	coding	ADAMTS6	protein_coding	ANTISENSE	ENSG00000049192	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.3q	L1	L1	L1FLnI	chr5	65846391	65856568	-	coding	NLN	protein_coding	ANTISENSE	ENSG00000123213	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.3r	L1	L1	L1FLnI	chr5	66057055	66067186	-	noncoding	ERBIN	protein_coding	ANTISENSE	ENSG00000112851	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.3s	L1	L1	L1FLnI	chr5	66102455	66112579	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025442.2	ENSG00000285999	8518	SREK1	ENSG00000153914	27392	None	chr5:66104804-66104806
L1FLnI_5q12.3t	L1	L1	L1FLnI	chr5	66216289	66226841	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092353.1	ENSG00000251391	71553	LINC02065	ENSG00000248846	6396	None	None
L1FLnI_5q12.3u	L1	L1	L1FLnI	chr5	66256318	66266507	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092353.1	ENSG00000251391	31887	LINC02065	ENSG00000248846	46425	None	None
L1FLnI_5q12.3v	L1	L1	L1FLnI	chr5	66382250	66392265	-	coding	AC092353.1,AC092353.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000251391,ENSG00000286062	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.3w	L1	L1	L1FLnI	chr5	66399047	66409311	-	noncoding	AC092353.2	lncRNA	SENSE	ENSG00000286062	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q12.3x	L1	L1	L1FLnI	chr5	66443780	66453870	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02229	ENSG00000250313	53510	AC092353.2	ENSG00000286062	3424	None	None
L1FLnI_5q13.1a	L1	L1	L1FLnI	chr5	67597838	67607971	-	noncoding	AC112206.2	lncRNA	ANTISENSE	ENSG00000249364	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.1b	L1	L1	L1FLnI	chr5	67626463	67635328	-	noncoding	AC112206.2,LINC02242	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000249364,ENSG00000249736	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.1c	L1	L1	L1FLnI	chr5	67660376	67670463	-	noncoding	AC112206.2	lncRNA	ANTISENSE	ENSG00000249364	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:67667074-67667076
L1FLnI_5q13.1d	L1	L1	L1FLnI	chr5	67700178	67709355	+	coding	AC112206.2,AC106798.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000249364,ENSG00000250421	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.1e	L1	L1	L1FLnI	chr5	67736399	67746431	-	coding	AC112206.2,AC106798.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000249364,ENSG00000250421	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.1f	L1	L1	L1FLnI	chr5	67748903	67757557	+	noncoding	AC112206.2,AC106798.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000249364,ENSG00000250421	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.1g	L1	L1	L1FLnI	chr5	67754067	67764194	+	noncoding	AC112206.2,AC106798.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000249364,ENSG00000250421	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.1h	L1	L1	L1FLnI	chr5	67776509	67786663	+	coding	AC112206.2,AC106798.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000249364,ENSG00000250421	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.1i	L1	L1	L1FLnI	chr5	67814446	67824459	+	coding	AC106798.1,AC024581.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000250421,ENSG00000249894	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.1j	L1	L1	L1FLnI	chr5	67886106	67896128	+	coding	AC106798.1,AC024581.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000250421,ENSG00000249894	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.1k	L1	L1	L1FLnI	chr5	68057774	68066343	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC106798.1	ENSG00000250421	155174	AC010376.1	ENSG00000253801	20818	None	None
L1FLnI_5q13.1l	L1	L1	L1FLnI	chr5	68057774	68066333	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC106798.1	ENSG00000250421	155174	AC010376.1	ENSG00000253801	20828	None	None
L1FLnI_5q13.1m	L1	L1	L1FLnI	chr5	68561889	68571351	+	noncoding	AC010280.1	lncRNA	ANTISENSE	ENSG00000248359	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:68565508-68565513
L1FLnI_5q13.1n	L1	L1	L1FLnI	chr5	68688142	68698161	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010280.1	ENSG00000248359	122627	AC093523.2	ENSG00000249335	94448	None	None
L1FLnI_5q13.1o	L1	L1	L1FLnI	chr5	68861456	68871942	+	noncoding	AC093523.2	lncRNA	ANTISENSE	ENSG00000249335	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.2a	L1	L1	L1FLnI	chr5	71604082	71614093	-	coding	MCCC2	protein_coding	ANTISENSE	ENSG00000131844	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.2b	L1	L1	L1FLnI	chr5	71680062	71690548	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MCCC2	ENSG00000131844	21356	CARTPT	ENSG00000164326	28727	None	None
L1FLnI_5q13.2c	L1	L1	L1FLnI	chr5	72573819	72583958	+	coding	LINC02056	lncRNA	ANTISENSE	ENSG00000248371	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.2d	L1	L1	L1FLnI	chr5	72724140	72734244	+	coding	AC063979.2,RPL7P22,H2BP4	lncRNA,processed_pseudogene,unitary_pseudogene	ANTISENSE,SENSE,SENSE	ENSG00000251613,ENSG00000226544,ENSG00000223497	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.2e	L1	L1	L1FLnI	chr5	72724140	72734234	+	coding	AC063979.2,RPL7P22,H2BP4	lncRNA,processed_pseudogene,unitary_pseudogene	ANTISENSE,SENSE,SENSE	ENSG00000251613,ENSG00000226544,ENSG00000223497	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.2f	L1	L1	L1FLnI	chr5	72773009	72782610	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC063979.2	ENSG00000251613	1276	AC035140.1	ENSG00000249085	11795	None	None
L1FLnI_5q13.2g	L1	L1	L1FLnI	chr5	72802693	72812993	-	coding	AC035140.1	lncRNA	SENSE	ENSG00000249085	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.2h	L1	L1	L1FLnI	chr5	73203267	73213715	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC116345.4	ENSG00000287090	1294	AC116345.1	ENSG00000249743	215	None	None
L1FLnI_5q13.2i	L1	L1	L1FLnI	chr5	73203267	73213699	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC116345.4	ENSG00000287090	1294	AC116345.1	ENSG00000249743	231	None	None
L1FLnI_5q13.2j	L1	L1	L1FLnI	chr5	73873912	73884069	-	coding	ARHGEF28	protein_coding	ANTISENSE	ENSG00000214944	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.3a	L1	L1	L1FLnI	chr5	74344626	74354735	-	coding	LINC01331	lncRNA	SENSE	ENSG00000248673	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.3b	L1	L1	L1FLnI	chr5	74702807	74712943	+	coding	HEXB	protein_coding	SENSE	ENSG00000049860	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.3c	L1	L1	L1FLnI	chr5	75097788	75106559	-	coding	ANKRD31	protein_coding	SENSE	ENSG00000145700	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.3d	L1	L1	L1FLnI	chr5	75127836	75137672	+	noncoding	ANKRD31	protein_coding	ANTISENSE	ENSG00000145700	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.3e	L1	L1	L1FLnI	chr5	75172250	75182591	+	coding	ANKRD31	protein_coding	ANTISENSE	ENSG00000145700	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.3f	L1	L1	L1FLnI	chr5	75249491	75259639	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC008897.2	ENSG00000247372	60516	ANKRD31	ENSG00000145700	12580	None	None
L1FLnI_5q13.3g	L1	L1	L1FLnI	chr5	75638737	75648765	+	coding	ANKDD1B	protein_coding	SENSE	ENSG00000189045	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.3h	L1	L1	L1FLnI	chr5	75692200	75702231	+	coding	POC5	protein_coding	ANTISENSE	ENSG00000152359	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.3i	L1	L1	L1FLnI	chr5	75692200	75702255	+	coding	POC5	protein_coding	ANTISENSE	ENSG00000152359	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.3j	L1	L1	L1FLnI	chr5	75769023	75778844	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108120.3	ENSG00000251419	52411	SLC25A5P9	ENSG00000251078	15544	None	None
L1FLnI_5q13.3k	L1	L1	L1FLnI	chr5	75769051	75778844	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108120.3	ENSG00000251419	52411	SLC25A5P9	ENSG00000251078	15572	None	None
L1FLnI_5q13.3l	L1	L1	L1FLnI	chr5	75792131	75802270	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108120.3	ENSG00000251419	28985	SLC25A5P9	ENSG00000251078	38652	None	None
L1FLnI_5q13.3m	L1	L1	L1FLnI	chr5	75808649	75818900	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108120.3	ENSG00000251419	12355	SLC25A5P9	ENSG00000251078	55170	None	None
L1FLnI_5q13.3n	L1	L1	L1FLnI	chr5	75808663	75818900	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108120.3	ENSG00000251419	12355	SLC25A5P9	ENSG00000251078	55184	None	None
L1FLnI_5q13.3o	L1	L1	L1FLnI	chr5	75895567	75905734	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108120.2	ENSG00000249301	4549	AC108120.3	ENSG00000251419	62803	None	None
L1FLnI_5q13.3p	L1	L1	L1FLnI	chr5	75963710	75973835	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108120.1	ENSG00000228367	42050	SAP18P1	ENSG00000249777	101696	None	None
L1FLnI_5q13.3q	L1	L1	L1FLnI	chr5	76031751	76041704	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SAP18P1	ENSG00000249777	33827	AC108120.1	ENSG00000228367	110091	None	None
L1FLnI_5q13.3r	L1	L1	L1FLnI	chr5	76258941	76269432	-	coding	SV2C	protein_coding	ANTISENSE	ENSG00000122012	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.3s	L1	L1	L1FLnI	chr5	77466172	77474947	+	coding	WDR41	protein_coding	ANTISENSE	ENSG00000164253	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.3t	L1	L1	L1FLnI	chr5	77471304	77481337	+	coding	WDR41	protein_coding	ANTISENSE	ENSG00000164253	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q13.3u	L1	L1	L1FLnI	chr5	77497406	77507549	+	coding	WDR41	protein_coding	ANTISENSE	ENSG00000164253	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.1a	L1	L1	L1FLnI	chr5	77605177	77615308	+	noncoding	WDR41	protein_coding	ANTISENSE	ENSG00000164253	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.1b	L1	L1	L1FLnI	chr5	77654907	77663907	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TBCA	ENSG00000171530	27259	OTP	ENSG00000171540	15219	chr5:77662624-77663015	None
L1FLnI_5q14.1c	L1	L1	L1FLnI	chr5	78114717	78124855	+	coding	AP3B1	protein_coding	ANTISENSE	ENSG00000132842	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr5:78116611-78116945	chr5:78115345-78115356
L1FLnI_5q14.1d	L1	L1	L1FLnI	chr5	78250478	78259455	+	noncoding	AP3B1	protein_coding	ANTISENSE	ENSG00000132842	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.1e	L1	L1	L1FLnI	chr5	78381931	78391524	-	noncoding	SCAMP1	protein_coding	ANTISENSE	ENSG00000085365	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:78387968-78387975
L1FLnI_5q14.1f	L1	L1	L1FLnI	chr5	78382321	78391524	-	noncoding	SCAMP1	protein_coding	ANTISENSE	ENSG00000085365	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:78387968-78387975
L1FLnI_5q14.1g	L1	L1	L1FLnI	chr5	78434735	78444839	-	noncoding	SCAMP1	protein_coding	ANTISENSE	ENSG00000085365	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.1h	L1	L1	L1FLnI	chr5	78451687	78461710	-	coding	SCAMP1	protein_coding	ANTISENSE	ENSG00000085365	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.1i	L1	L1	L1FLnI	chr5	78578843	78588495	-	noncoding	LHFPL2	protein_coding	SENSE	ENSG00000145685	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:78586411-78586576	None
L1FLnI_5q14.1j	L1	L1	L1FLnI	chr5	78678465	78688578	+	coding	LHFPL2	protein_coding	ANTISENSE	ENSG00000145685	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:78678425-78678556	None
L1FLnI_5q14.1k	L1	L1	L1FLnI	chr5	78706260	78716393	+	coding	LHFPL2,AC008802.1	protein_coding,processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000145685,ENSG00000254170	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:78716102-78716106
L1FLnI_5q14.1l	L1	L1	L1FLnI	chr5	78847569	78857704	-	coding	ARSB	protein_coding	SENSE	ENSG00000113273	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.1m	L1	L1	L1FLnI	chr5	78847587	78857704	-	coding	ARSB	protein_coding	SENSE	ENSG00000113273	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.1n	L1	L1	L1FLnI	chr5	78863307	78873328	+	coding	ARSB	protein_coding	ANTISENSE	ENSG00000113273	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.1o	L1	L1	L1FLnI	chr5	78938784	78948925	-	coding	ARSB	protein_coding	SENSE	ENSG00000113273	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.1p	L1	L1	L1FLnI	chr5	79095401	79105410	-	coding	DMGDH	protein_coding	SENSE	ENSG00000132837	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.1q	L1	L1	L1FLnI	chr5	79335258	79344614	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HOMER1	ENSG00000152413	28022	JMY	ENSG00000152409	8047	None	None
L1FLI_5q14.1	L1	L1	L1FLI	chr5	79777897	79785946	-	coding	CMYA5,AC008496.2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000164309,ENSG00000250258	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:79785032-79785037
L1FLnI_5q14.1r	L1	L1	L1FLnI	chr5	79898796	79908948	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC008496.1	ENSG00000238254	48950	LINC01455	ENSG00000250888	27631	None	None
L1FLnI_5q14.1s	L1	L1	L1FLnI	chr5	79907496	79917608	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008496.1	ENSG00000238254	57650	LINC01455	ENSG00000250888	18971	None	None
L1FLnI_5q14.1t	L1	L1	L1FLnI	chr5	80390646	80400765	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZFYVE16	ENSG00000039319	7248	RNU6-211P	ENSG00000206774	24814	chr5:80399393-80400010	chr5:80399536-80399548,chr5:80399578-80399596
L1FLnI_5q14.1u	L1	L1	L1FLnI	chr5	80424593	80434094	+	coding	ZFYVE16,AC008771.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000039319,ENSG00000249042	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.1v	L1	L1	L1FLnI	chr5	80840411	80850549	-	coding	MSH3	protein_coding	ANTISENSE	ENSG00000113318	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.1w	L1	L1	L1FLnI	chr5	81025185	81034648	+	coding	RASGRF2	protein_coding	SENSE	ENSG00000113319	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.1x	L1	L1	L1FLnI	chr5	81273766	81283297	+	coding	CKMT2-AS1	lncRNA	ANTISENSE	ENSG00000247572	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.1y	L1	L1	L1FLnI	chr5	81369568	81379995	+	noncoding	ACOT12	protein_coding	ANTISENSE	ENSG00000172497	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.1z	L1	L1	L1FLnI	chr5	81588351	81598522	+	coding	SSBP2	protein_coding	ANTISENSE	ENSG00000145687	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.1aa	L1	L1	L1FLnI	chr5	81612592	81622618	+	coding	SSBP2	protein_coding	ANTISENSE	ENSG00000145687	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.1ba	L1	L1	L1FLnI	chr5	81683430	81693423	+	noncoding	SSBP2	protein_coding	ANTISENSE	ENSG00000145687	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.2a	L1	L1	L1FLnI	chr5	82123803	82134308	-	noncoding	ATG10	protein_coding	ANTISENSE	ENSG00000152348	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.2b	L1	L1	L1FLnI	chr5	82131752	82142178	-	noncoding	ATG10	protein_coding	ANTISENSE	ENSG00000152348	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.2c	L1	L1	L1FLnI	chr5	82428902	82438923	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC026782.1	ENSG00000248393	106939	ATP6AP1L	ENSG00000205464	41925	None	None
L1FLnI_5q14.2d	L1	L1	L1FLnI	chr5	82558992	82569885	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026782.1	ENSG00000248393	12682	AC026782.2	ENSG00000248870	16891	None	None
L1FLnI_5q14.2e	L1	L1	L1FLnI	chr5	82601459	82610707	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026782.2	ENSG00000248870	14048	AC008885.2	ENSG00000249100	154697	None	None
L1FLnI_5q14.2f	L1	L1	L1FLnI	chr5	82866362	82876288	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108174.1	ENSG00000248112	43088	LINC01338	ENSG00000281327	6404	None	None
L1FLnI_5q14.2g	L1	L1	L1FLnI	chr5	82866382	82876288	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108174.1	ENSG00000248112	43088	LINC01338	ENSG00000281327	6424	None	None
L1FLnI_5q14.2h	L1	L1	L1FLnI	chr5	82928945	82938960	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108174.1	ENSG00000248112	7826	AC027338.2	ENSG00000249857	1498	None	None
L1FLnI_5q14.2i	L1	L1	L1FLnI	chr5	82940573	82949920	+	noncoding	AC027338.2	lncRNA	ANTISENSE	ENSG00000249857	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.2j	L1	L1	L1FLnI	chr5	83127475	83137276	-	coding	XRCC4	protein_coding	ANTISENSE	ENSG00000152422	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:83134643-83134682
L1FLnI_5q14.2k	L1	L1	L1FLnI	chr5	83127484	83137276	-	coding	XRCC4	protein_coding	ANTISENSE	ENSG00000152422	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:83134643-83134682
L1ORF2_5q14.2	L1	L1	L1ORF2	chr5	83313335	83321384	+	coding	XRCC4	protein_coding	SENSE	ENSG00000152422	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.2l	L1	L1	L1FLnI	chr5	83405570	83414423	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	XRCC4	ENSG00000152422	51783	FTH1P9	ENSG00000251395	12253	chr5:83406960-83407171	None
L1FLnI_5q14.2m	L1	L1	L1FLnI	chr5	83457301	83467317	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	VCAN	ENSG00000038427	4301	FTH1P9	ENSG00000251395	30271	None	None
L1FLnI_5q14.3a	L1	L1	L1FLnI	chr5	83749778	83760129	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC020899.1	ENSG00000242858	2789	RNU4-11P	ENSG00000202157	43425	None	None
L1FLnI_5q14.3b	L1	L1	L1FLnI	chr5	83793113	83803142	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU4-11P	ENSG00000202157	412	AC020899.1	ENSG00000242858	46124	None	None
L1FLnI_5q14.3c	L1	L1	L1FLnI	chr5	84046839	84056979	+	coding	EDIL3	protein_coding	ANTISENSE	ENSG00000164176	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3d	L1	L1	L1FLnI	chr5	84890222	84899797	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP79	ENSG00000214853	100015	EDIL3-DT	ENSG00000250320	399457	None	None
L1FLnI_5q14.3e	L1	L1	L1FLnI	chr5	85427972	85438088	+	noncoding	AC010486.2	lncRNA	SENSE	ENSG00000249023	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3f	L1	L1	L1FLnI	chr5	85454311	85463936	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL5P17	ENSG00000243859	498	AC010486.3	ENSG00000249842	6553	None	None
L1FLnI_5q14.3g	L1	L1	L1FLnI	chr5	85508387	85517389	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026700.1	ENSG00000251066	32020	RPL5P17	ENSG00000243859	43077	None	None
L1FLnI_5q14.3h	L1	L1	L1FLnI	chr5	85551480	85562854	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026700.1	ENSG00000251066	1528	AC010595.1	ENSG00000250874	100378	None	None
L1FLnI_5q14.3i	L1	L1	L1FLnI	chr5	85553484	85562854	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026700.1	ENSG00000251066	3532	AC010595.1	ENSG00000250874	100378	None	None
L1FLnI_5q14.3j	L1	L1	L1FLnI	chr5	85581743	85592196	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC010595.1	ENSG00000250874	71036	AC026700.1	ENSG00000251066	31791	None	None
L1FLnI_5q14.3k	L1	L1	L1FLnI	chr5	85634953	85645010	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC026700.1	ENSG00000251066	85001	AC010595.1	ENSG00000250874	18222	None	None
L1FLnI_5q14.3l	L1	L1	L1FLnI	chr5	85657095	85667141	-	coding	AC010595.1	lncRNA	ANTISENSE	ENSG00000250874	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3m	L1	L1	L1FLnI	chr5	85717671	85727960	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010595.1	ENSG00000250874	52987	RPS2P25	ENSG00000241965	34599	None	None
L1FLnI_5q14.3n	L1	L1	L1FLnI	chr5	85916463	85925159	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026414.1	ENSG00000249153	67264	PTP4A1P4	ENSG00000250359	162367	None	None
L1FLnI_5q14.3o	L1	L1	L1FLnI	chr5	86077018	86086055	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PTP4A1P4	ENSG00000250359	1471	AC026414.1	ENSG00000249153	227819	None	None
L1FLnI_5q14.3p	L1	L1	L1FLnI	chr5	86265311	86274639	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NBPF22P	ENSG00000205449	7821	PTP4A1P4	ENSG00000250359	177464	None	None
L1ORF2_5q14.3	L1	L1	L1ORF2	chr5	86509690	86517734	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC026444.1	ENSG00000251585	106730	COX7C	ENSG00000127184	100194	None	None
L1FLnI_5q14.3q	L1	L1	L1FLnI	chr5	86725335	86735462	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02059	ENSG00000250544	11356	RNU6-804P	ENSG00000207013	62085	None	None
L1FLnI_5q14.3r	L1	L1	L1FLnI	chr5	86771825	86782100	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008539.1	ENSG00000248701	15585	LINC02059	ENSG00000250544	22048	None	None
L1FLnI_5q14.3s	L1	L1	L1FLnI	chr5	86848163	86857339	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091429.1	ENSG00000242477	26892	AC008539.1	ENSG00000248701	47883	None	None
L1FLnI_5q14.3t	L1	L1	L1FLnI	chr5	87025233	87034445	-	noncoding	AC109492.1	lncRNA	ANTISENSE	ENSG00000249061	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3u	L1	L1	L1FLnI	chr5	87036553	87046652	-	noncoding	AC109492.1	lncRNA	ANTISENSE	ENSG00000249061	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3v	L1	L1	L1FLnI	chr5	87080923	87091065	+	coding	AC109492.1,LINC01949	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000249061,ENSG00000233828	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3w	L1	L1	L1FLnI	chr5	87198635	87207762	-	noncoding	AC008394.1	lncRNA	SENSE	ENSG00000288569	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3x	L1	L1	L1FLnI	chr5	87211605	87221830	-	noncoding	AC008394.1	lncRNA	SENSE	ENSG00000288569	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:87215264-87215271
L1FLnI_5q14.3y	L1	L1	L1FLnI	chr5	87468837	87479217	+	noncoding	AC018754.1	lncRNA	SENSE	ENSG00000285190	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3z	L1	L1	L1FLnI	chr5	87918493	87928612	-	noncoding	AC114971.1	lncRNA	SENSE	ENSG00000287862	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:87918824-87918830	None
L1FLnI_5q14.3aa	L1	L1	L1FLnI	chr5	87986992	87996792	+	coding	AC114971.1	lncRNA	ANTISENSE	ENSG00000287862	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3ba	L1	L1	L1FLnI	chr5	88008956	88019122	-	coding	AC114971.1	lncRNA	SENSE	ENSG00000287862	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3ca	L1	L1	L1FLnI	chr5	88048832	88058845	+	coding	AC114971.1	lncRNA	ANTISENSE	ENSG00000287862	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3da	L1	L1	L1FLnI	chr5	88116439	88126087	+	coding	AC114971.1	lncRNA	ANTISENSE	ENSG00000287862	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3ea	L1	L1	L1FLnI	chr5	88302255	88310934	+	noncoding	TMEM161B-AS1	lncRNA	SENSE	ENSG00000247828	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3fa	L1	L1	L1FLnI	chr5	88582666	88593319	+	noncoding	LINC00461	lncRNA	ANTISENSE	ENSG00000245526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3ga	L1	L1	L1FLnI	chr5	88616954	88627100	-	noncoding	LINC00461	lncRNA	SENSE	ENSG00000245526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3ha	L1	L1	L1FLnI	chr5	88793158	88802888	-	noncoding	MEF2C	protein_coding	SENSE	ENSG00000081189	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:88796769-88796776
L1FLnI_5q14.3ia	L1	L1	L1FLnI	chr5	89618049	89628183	+	coding	LINC02161	lncRNA	SENSE	ENSG00000250437	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3ja	L1	L1	L1FLnI	chr5	89629674	89639579	-	coding	LINC02161	lncRNA	ANTISENSE	ENSG00000250437	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3ka	L1	L1	L1FLnI	chr5	89673177	89681984	+	noncoding	LINC02161	lncRNA	SENSE	ENSG00000250437	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3la	L1	L1	L1FLnI	chr5	89740734	89751156	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113167.1	ENSG00000214942	149508	LINC02161	ENSG00000250437	63033	None	None
L1FLnI_5q14.3ma	L1	L1	L1FLnI	chr5	89773961	89784466	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02161	ENSG00000250437	96260	AC113167.1	ENSG00000214942	116198	None	None
L1FLnI_5q14.3na	L1	L1	L1FLnI	chr5	89775200	89784466	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02161	ENSG00000250437	97499	AC113167.1	ENSG00000214942	116198	None	None
L1FLnI_5q14.3oa	L1	L1	L1FLnI	chr5	89888855	89898655	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02161	ENSG00000250437	211154	AC113167.1	ENSG00000214942	2009	None	None
L1FLnI_5q14.3pa	L1	L1	L1FLnI	chr5	89996860	90006433	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113167.1	ENSG00000214942	5977	MIR3660	ENSG00000264342	10188	None	None
L1FLnI_5q14.3qa	L1	L1	L1FLnI	chr5	90027671	90038163	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3660	ENSG00000264342	10951	LINC01339	ENSG00000248555	114889	None	None
L1FLnI_5q14.3ra	L1	L1	L1FLnI	chr5	90039061	90049158	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01339	ENSG00000248555	103894	MIR3660	ENSG00000264342	22341	None	None
L1FLnI_5q14.3sa	L1	L1	L1FLnI	chr5	90069731	90079736	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3660	ENSG00000264342	53011	LINC01339	ENSG00000248555	73316	None	None
L1FLnI_5q14.3ta	L1	L1	L1FLnI	chr5	90082479	90091418	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3660	ENSG00000264342	65759	LINC01339	ENSG00000248555	61634	None	None
L1FLnI_5q14.3ua	L1	L1	L1FLnI	chr5	90143272	90153385	+	noncoding	LINC01339	lncRNA	ANTISENSE	ENSG00000248555	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3va	L1	L1	L1FLnI	chr5	90188576	90197247	+	noncoding	LINC01339	lncRNA	ANTISENSE	ENSG00000248555	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3wa	L1	L1	L1FLnI	chr5	90204837	90214868	+	coding	LINC01339	lncRNA	ANTISENSE	ENSG00000248555	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3xa	L1	L1	L1FLnI	chr5	90235326	90244865	+	coding	LINC01339	lncRNA	ANTISENSE	ENSG00000248555	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3ya	L1	L1	L1FLnI	chr5	90319694	90330823	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099554.1	ENSG00000253321	22214	LINC01339	ENSG00000248555	29616	chr5:90327135-90327246	None
L1FLnI_5q14.3za	L1	L1	L1FLnI	chr5	90321166	90330823	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099554.1	ENSG00000253321	22214	LINC01339	ENSG00000248555	31088	chr5:90327135-90327246	None
L1FLnI_5q14.3ab	L1	L1	L1FLnI	chr5	90575626	90585292	-	coding	ADGRV1	protein_coding	ANTISENSE	ENSG00000164199	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3bb	L1	L1	L1FLnI	chr5	90662112	90672137	-	coding	ADGRV1	protein_coding	ANTISENSE	ENSG00000164199	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3cb	L1	L1	L1FLnI	chr5	90734359	90743255	-	noncoding	ADGRV1	protein_coding	ANTISENSE	ENSG00000164199	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3db	L1	L1	L1FLnI	chr5	90791186	90801580	+	noncoding	ADGRV1	protein_coding	SENSE	ENSG00000164199	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr5:90801111-90801315	None
L1FLnI_5q14.3eb	L1	L1	L1FLnI	chr5	90815915	90825942	-	coding	ADGRV1	protein_coding	ANTISENSE	ENSG00000164199	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3fb	L1	L1	L1FLnI	chr5	90923132	90933158	-	coding	ADGRV1	protein_coding	ANTISENSE	ENSG00000164199	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3gb	L1	L1	L1FLnI	chr5	90966241	90976366	+	noncoding	ADGRV1	protein_coding	SENSE	ENSG00000164199	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3hb	L1	L1	L1FLnI	chr5	91551894	91562033	+	coding	ARRDC3-AS1	lncRNA	SENSE	ENSG00000281357	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3ib	L1	L1	L1FLnI	chr5	91746148	91755158	-	noncoding	AC093298.2	lncRNA	ANTISENSE	ENSG00000286121	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3jb	L1	L1	L1FLnI	chr5	92192975	92202995	-	coding	AC114316.1	lncRNA	ANTISENSE	ENSG00000250049	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3kb	L1	L1	L1FLnI	chr5	92192979	92202995	-	coding	AC114316.1	lncRNA	ANTISENSE	ENSG00000250049	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3lb	L1	L1	L1FLnI	chr5	92271935	92282002	+	coding	AC114316.1	lncRNA	SENSE	ENSG00000250049	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:92276041-92276291	None
L1FLnI_5q14.3mb	L1	L1	L1FLnI	chr5	92296470	92306485	-	coding	AC114316.1	lncRNA	ANTISENSE	ENSG00000250049	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3nb	L1	L1	L1FLnI	chr5	92432386	92442446	+	noncoding	AC114316.1,AC124854.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000250049,ENSG00000249776	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3ob	L1	L1	L1FLnI	chr5	92433285	92442446	+	noncoding	AC114316.1,AC124854.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000250049,ENSG00000249776	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3pb	L1	L1	L1FLnI	chr5	92829208	92839258	-	noncoding	AC008517.1	lncRNA	ANTISENSE	ENSG00000248588	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q14.3qb	L1	L1	L1FLnI	chr5	92829208	92838025	-	noncoding	AC008517.1	lncRNA	ANTISENSE	ENSG00000248588	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15a	L1	L1	L1FLnI	chr5	93166061	93176190	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	POLD2P1	ENSG00000213730	91239	AC026408.1	ENSG00000286509	74293	None	None
L1FLnI_5q15b	L1	L1	L1FLnI	chr5	93209647	93219676	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC026408.1	ENSG00000286509	117879	POLD2P1	ENSG00000213730	47753	None	None
L1FLnI_5q15c	L1	L1	L1FLnI	chr5	93257537	93267565	+	coding	POLD2P1	processed_pseudogene	SENSE	ENSG00000213730	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15d	L1	L1	L1FLnI	chr5	93388993	93399028	-	coding	NR2F1-AS1	lncRNA	SENSE	ENSG00000237187	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15e	L1	L1	L1FLnI	chr5	93390363	93399028	-	coding	NR2F1-AS1	lncRNA	SENSE	ENSG00000237187	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15f	L1	L1	L1FLnI	chr5	93438577	93448705	+	noncoding	NR2F1-AS1	lncRNA	ANTISENSE	ENSG00000237187	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15g	L1	L1	L1FLnI	chr5	93519046	93529542	+	noncoding	NR2F1-AS1	lncRNA	ANTISENSE	ENSG00000237187	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15h	L1	L1	L1FLnI	chr5	93686305	93696692	+	noncoding	FAM172A	protein_coding	ANTISENSE	ENSG00000113391	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15i	L1	L1	L1FLnI	chr5	93751883	93761565	+	noncoding	FAM172A	protein_coding	ANTISENSE	ENSG00000113391	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15j	L1	L1	L1FLnI	chr5	93758024	93767699	+	noncoding	FAM172A	protein_coding	ANTISENSE	ENSG00000113391	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15k	L1	L1	L1FLnI	chr5	94098615	94107580	+	noncoding	FAM172A	protein_coding	ANTISENSE	ENSG00000113391	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:94099621-94099625
L1FLnI_5q15l	L1	L1	L1FLnI	chr5	94132329	94142083	-	noncoding	AC117528.1	lncRNA	ANTISENSE	ENSG00000286577	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15m	L1	L1	L1FLnI	chr5	94579554	94589669	+	coding	KIAA0825	protein_coding	ANTISENSE	ENSG00000185261	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15n	L1	L1	L1FLnI	chr5	94654479	94664991	-	noncoding	SLF1	protein_coding	ANTISENSE	ENSG00000133302	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15o	L1	L1	L1FLnI	chr5	94951471	94961926	+	noncoding	MCTP1	protein_coding	ANTISENSE	ENSG00000175471	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15p	L1	L1	L1FLnI	chr5	95026440	95036226	+	noncoding	MCTP1	protein_coding	ANTISENSE	ENSG00000175471	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:95027473-95027634	None
L1FLnI_5q15q	L1	L1	L1FLnI	chr5	95166419	95175950	-	coding	MCTP1	protein_coding	SENSE	ENSG00000175471	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15r	L1	L1	L1FLnI	chr5	95359533	95369993	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM81B	ENSG00000153347	21373	MCTP1	ENSG00000175471	74958	None	None
L1FLnI_5q15s	L1	L1	L1FLnI	chr5	96102702	96112749	-	coding	AC104123.1,MIR583HG	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000251314,ENSG00000250551	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:96110549-96110590
L1FLnI_5q15t	L1	L1	L1FLnI	chr5	96204817	96213644	-	noncoding	AC104123.1,MIR583HG,RNU6-524P,AC099509.1	lncRNA,lncRNA,snRNA,lncRNA	ANTISENSE,ANTISENSE,SENSE,SENSE	ENSG00000251314,ENSG00000250551,ENSG00000206997,ENSG00000249746	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15u	L1	L1	L1FLnI	chr5	96302966	96313406	-	noncoding	AC104123.1	lncRNA	ANTISENSE	ENSG00000251314	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15v	L1	L1	L1FLnI	chr5	96355501	96365294	-	noncoding	AC104123.1	lncRNA	ANTISENSE	ENSG00000251314	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15w	L1	L1	L1FLnI	chr5	96361337	96371472	-	coding	AC104123.1	lncRNA	ANTISENSE	ENSG00000251314	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15x	L1	L1	L1FLnI	chr5	96545928	96555739	+	noncoding	AC104123.1,CAST	lncRNA,protein_coding	SENSE,SENSE	ENSG00000251314,ENSG00000153113	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15y	L1	L1	L1FLnI	chr5	96551742	96561868	+	noncoding	AC104123.1,CAST	lncRNA,protein_coding	SENSE,SENSE	ENSG00000251314,ENSG00000153113	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15z	L1	L1	L1FLnI	chr5	97152790	97163699	-	noncoding	LIX1-AS1,RIOK2	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000251513,ENSG00000058729	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr5:97156365-97156667	None
L1FLnI_5q15aa	L1	L1	L1FLnI	chr5	97233759	97243922	-	coding	LIX1-AS1	lncRNA	ANTISENSE	ENSG00000251513	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15ba	L1	L1	L1FLnI	chr5	97251257	97261396	+	noncoding	LIX1-AS1	lncRNA	SENSE	ENSG00000251513	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15ca	L1	L1	L1FLnI	chr5	97267874	97277449	-	noncoding	LIX1-AS1	lncRNA	ANTISENSE	ENSG00000251513	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15da	L1	L1	L1FLnI	chr5	97301797	97310597	-	noncoding	LIX1-AS1	lncRNA	ANTISENSE	ENSG00000251513	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15ea	L1	L1	L1FLnI	chr5	97349446	97359872	-	noncoding	LIX1-AS1	lncRNA	ANTISENSE	ENSG00000251513	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:97355943-97355955,chr5:97355967-97355991
L1FLnI_5q15fa	L1	L1	L1FLnI	chr5	97513414	97523443	-	coding	LINC01340	lncRNA	ANTISENSE	ENSG00000250331	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15ga	L1	L1	L1FLnI	chr5	97513427	97523443	-	coding	LINC01340	lncRNA	ANTISENSE	ENSG00000250331	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15ha	L1	L1	L1FLnI	chr5	97617690	97627289	-	noncoding	LINC01340	lncRNA	ANTISENSE	ENSG00000250331	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15ia	L1	L1	L1FLnI	chr5	97678770	97688340	-	coding	LINC01340	lncRNA	ANTISENSE	ENSG00000250331	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15ja	L1	L1	L1FLnI	chr5	97700011	97708982	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC112203.1	ENSG00000251193	28912	LINC01340	ENSG00000250331	9831	None	None
L1FLnI_5q15ka	L1	L1	L1FLnI	chr5	97717294	97727395	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC112203.1	ENSG00000251193	10499	LINC01340	ENSG00000250331	27114	None	None
L1FLnI_5q15la	L1	L1	L1FLnI	chr5	97766119	97776129	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC122697.1	ENSG00000286953	23275	AC112203.1	ENSG00000251193	27206	None	None
L1FLnI_5q15ma	L1	L1	L1FLnI	chr5	97809416	97819440	-	coding	AC122697.1	lncRNA	SENSE	ENSG00000286953	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15na	L1	L1	L1FLnI	chr5	97850925	97861689	+	noncoding	AC122697.1,LINC02234	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000286953,ENSG00000248202	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15oa	L1	L1	L1FLnI	chr5	97896660	97906796	-	coding	LINC02234	lncRNA	ANTISENSE	ENSG00000248202	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15pa	L1	L1	L1FLnI	chr5	97987815	97997956	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02234	ENSG00000248202	64318	AC008834.1	ENSG00000249101	28009	None	None
L1FLnI_5q15qa	L1	L1	L1FLnI	chr5	98019100	98029560	+	coding	AC008834.1	processed_pseudogene	SENSE	ENSG00000249101	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15ra	L1	L1	L1FLnI	chr5	98109952	98120096	+	coding	LINC01846	lncRNA	ANTISENSE	ENSG00000248901	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:98109639-98109984,chr5:98110359-98110624	None
L1FLnI_5q15sa	L1	L1	L1FLnI	chr5	98117534	98128057	+	noncoding	LINC01846	lncRNA	ANTISENSE	ENSG00000248901	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15ta	L1	L1	L1FLnI	chr5	98131978	98141474	+	coding	LINC01846	lncRNA	ANTISENSE	ENSG00000248901	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15ua	L1	L1	L1FLnI	chr5	98131978	98141493	+	coding	LINC01846	lncRNA	ANTISENSE	ENSG00000248901	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q15va	L1	L1	L1FLnI	chr5	98176422	98186503	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01846	ENSG00000248901	15070	AC116347.2	ENSG00000249135	16556	None	None
L1FLnI_5q15wa	L1	L1	L1FLnI	chr5	98255323	98263896	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC233964.1	ENSG00000176183	74848	AC116347.1	ENSG00000238000	41202	None	None
L1FLnI_5q15xa	L1	L1	L1FLnI	chr5	98339494	98349646	+	coding	AC233964.1	processed_pseudogene	SENSE	ENSG00000176183	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:98339855-98339879,chr5:98339931-98339946
L1FLnI_5q15ya	L1	L1	L1FLnI	chr5	98543167	98553201	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO1P24	ENSG00000249448	131375	CTBP2P4	ENSG00000251102	23140	None	None
L1FLnI_5q15za	L1	L1	L1FLnI	chr5	98664800	98675309	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTBP2P4	ENSG00000251102	87540	DDX18P4	ENSG00000251553	4093	None	None
L1FLnI_5q15ab	L1	L1	L1FLnI	chr5	98738592	98747941	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DDX18P4	ENSG00000251553	57225	RGMB	ENSG00000174136	20709	None	None
L1FLnI_5q21.1a	L1	L1	L1FLnI	chr5	99033815	99044270	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02062	ENSG00000248489	38802	AC114324.2	ENSG00000249444	445289	chr5:99037855-99038004	None
L1FLnI_5q21.1b	L1	L1	L1FLnI	chr5	99033815	99044260	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02062	ENSG00000248489	38802	AC114324.2	ENSG00000249444	445299	chr5:99037855-99038004	None
L1FLnI_5q21.1c	L1	L1	L1FLnI	chr5	99142678	99152858	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02062	ENSG00000248489	147665	AC114324.2	ENSG00000249444	336701	None	None
L1FLnI_5q21.1d	L1	L1	L1FLnI	chr5	99250398	99261035	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114324.2	ENSG00000249444	228524	LINC02062	ENSG00000248489	255385	None	None
L1FLnI_5q21.1e	L1	L1	L1FLnI	chr5	99252063	99261035	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114324.2	ENSG00000249444	228524	LINC02062	ENSG00000248489	257050	None	None
L1FLnI_5q21.1f	L1	L1	L1FLnI	chr5	99339117	99349264	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC114324.2	ENSG00000249444	140295	LINC02062	ENSG00000248489	344104	None	None
L1FLnI_5q21.1g	L1	L1	L1FLnI	chr5	99557245	99567400	-	coding	LINC02113	lncRNA	ANTISENSE	ENSG00000249515	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q21.1h	L1	L1	L1FLnI	chr5	99757443	99767731	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092284.1	ENSG00000250391	180564	AC008837.2	ENSG00000248928	162146	None	None
L1FLnI_5q21.1i	L1	L1	L1FLnI	chr5	99852484	99862444	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC008837.2	ENSG00000248928	257187	AC092284.1	ENSG00000250391	85851	None	None
L1FLnI_5q21.1j	L1	L1	L1FLnI	chr5	100024603	100034820	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113407.1	ENSG00000199378	2697	MTCYBP22	ENSG00000270232	11108	None	None
L1FLnI_5q21.1k	L1	L1	L1FLnI	chr5	100457606	100467795	-	coding	AC113385.1,AC021086.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000249787,ENSG00000247877	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q21.1l	L1	L1	L1FLnI	chr5	100554432	100563735	-	coding	FAM174A	protein_coding	ANTISENSE	ENSG00000174132	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q21.1m	L1	L1	L1FLnI	chr5	100696407	100706298	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027315.1	ENSG00000250806	38437	RN7SKP62	ENSG00000207269	26760	None	None
L1FLnI_5q21.1n	L1	L1	L1FLnI	chr5	100919633	100928831	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL802P	ENSG00000277506	652999	ST8SIA4	ENSG00000113532	16351	None	None
L1FLnI_5q21.1o	L1	L1	L1FLnI	chr5	100929590	100939728	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL802P	ENSG00000277506	642102	ST8SIA4	ENSG00000113532	26308	None	None
L1FLnI_5q21.1p	L1	L1	L1FLnI	chr5	100995903	101004995	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ST8SIA4	ENSG00000113532	92621	RN7SL802P	ENSG00000277506	576835	None	None
L1FLnI_5q21.1q	L1	L1	L1FLnI	chr5	101055261	101064897	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL802P	ENSG00000277506	516933	ST8SIA4	ENSG00000113532	151979	None	None
L1FLnI_5q21.1r	L1	L1	L1FLnI	chr5	101159357	101169497	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ST8SIA4	ENSG00000113532	256075	RN7SL802P	ENSG00000277506	412333	None	None
L1FLnI_5q21.1s	L1	L1	L1FLnI	chr5	101176632	101186647	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ST8SIA4	ENSG00000113532	273350	RN7SL802P	ENSG00000277506	395183	None	None
L1FLnI_5q21.1t	L1	L1	L1FLnI	chr5	101438560	101448695	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ST8SIA4	ENSG00000113532	535278	RN7SL802P	ENSG00000277506	133135	None	None
L1FLnI_5q21.1u	L1	L1	L1FLnI	chr5	101704078	101712916	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR7H2P	ENSG00000251261	103559	RN7SL802P	ENSG00000277506	121950	None	None
L1FLnI_5q21.1v	L1	L1	L1FLnI	chr5	101709770	101719905	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR7H2P	ENSG00000251261	96570	RN7SL802P	ENSG00000277506	127642	None	None
L1FLnI_5q21.1w	L1	L1	L1FLnI	chr5	101936355	101947044	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117525.1	ENSG00000249495	29252	OR7H2P	ENSG00000251261	119575	None	None
L1FLI_5q21.1	L1	L1	L1FLI	chr5	102130356	102138402	+	coding	RNA5SP188	rRNA_pseudogene	ANTISENSE	ENSG00000199786	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q21.1x	L1	L1	L1FLnI	chr5	102185985	102194935	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC008948.1	ENSG00000248261	39111	SLCO4C1	ENSG00000173930	39051	None	None
L1FLnI_5q21.1y	L1	L1	L1FLnI	chr5	102347821	102357023	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP68	ENSG00000222987	45011	SLCO6A1	ENSG00000205359	14751	None	None
L1FLnI_5q21.1z	L1	L1	L1FLnI	chr5	102417344	102427569	+	coding	SLCO6A1	protein_coding	ANTISENSE	ENSG00000205359	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q21.1aa	L1	L1	L1FLnI	chr5	102428225	102437334	-	noncoding	SLCO6A1	protein_coding	SENSE	ENSG00000205359	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q21.1ba	L1	L1	L1FLnI	chr5	102667731	102677760	+	coding	LINC00491,AC099487.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000250682,ENSG00000286338	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q21.1ca	L1	L1	L1FLnI	chr5	103043254	103053269	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	EIF3KP1	ENSG00000175749	10223	GIN1	ENSG00000145723	32731	None	None
L1FLnI_5q21.1da	L1	L1	L1FLnI	chr5	103075307	103083940	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GIN1	ENSG00000145723	2060	EIF3KP1	ENSG00000175749	42276	None	None
L1FLnI_5q21.2a	L1	L1	L1FLnI	chr5	104073864	104083881	-	coding	LINC02163	lncRNA	ANTISENSE	ENSG00000251026	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q21.2b	L1	L1	L1FLnI	chr5	104409218	104418915	+	noncoding	AC099520.1	lncRNA	ANTISENSE	ENSG00000251574	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q21.2c	L1	L1	L1FLnI	chr5	104445877	104455906	-	coding	AC099520.1	lncRNA	SENSE	ENSG00000251574	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:104452731-104452743,chr5:104452776-104452783
L1FLI_5q21.2	L1	L1	L1FLI	chr5	104517586	104525632	+	coding	AC099520.1	lncRNA	ANTISENSE	ENSG00000251574	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q21.2d	L1	L1	L1FLnI	chr5	104714321	104723741	+	coding	AC099520.1	lncRNA	ANTISENSE	ENSG00000251574	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q21.2e	L1	L1	L1FLnI	chr5	104715011	104723741	+	coding	AC099520.1	lncRNA	ANTISENSE	ENSG00000251574	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q21.2f	L1	L1	L1FLnI	chr5	104797033	104806626	+	noncoding	AC099520.1,AC099520.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000251574,ENSG00000253776	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q21.2g	L1	L1	L1FLnI	chr5	105086634	105098105	+	noncoding	AC099520.1,AC091987.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000251574,ENSG00000253584	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q21.3a	L1	L1	L1FLnI	chr5	105194999	105204452	+	coding	AC099520.1,AC091987.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000251574,ENSG00000253584	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q21.3b	L1	L1	L1FLnI	chr5	105194999	105204442	+	coding	AC099520.1,AC091987.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000251574,ENSG00000253584	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q21.3c	L1	L1	L1FLnI	chr5	105512738	105522774	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP189	ENSG00000201790	400220	AC099520.1	ENSG00000251574	119768	None	None
L1FLnI_5q21.3d	L1	L1	L1FLnI	chr5	105603078	105612208	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099520.1	ENSG00000251574	210108	RNA5SP189	ENSG00000201790	310786	None	None
L1FLnI_5q21.3e	L1	L1	L1FLnI	chr5	105717213	105726278	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099520.1	ENSG00000251574	324243	RNA5SP189	ENSG00000201790	196716	None	None
L1FLnI_5q21.3f	L1	L1	L1FLnI	chr5	106424884	106434881	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC114940.1	ENSG00000250145	108185	AC027313.1	ENSG00000251204	7643	None	None
L1FLnI_5q21.3g	L1	L1	L1FLnI	chr5	106622307	106632311	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01950	ENSG00000251027	182886	AC114940.2	ENSG00000252337	75504	None	None
L1FLnI_5q21.3h	L1	L1	L1FLnI	chr5	106622320	106632311	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01950	ENSG00000251027	182886	AC114940.2	ENSG00000252337	75517	None	None
L1FLnI_5q21.3i	L1	L1	L1FLnI	chr5	106713368	106723388	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01950	ENSG00000251027	91809	AC114940.2	ENSG00000252337	166565	None	None
L1FLnI_5q21.3j	L1	L1	L1FLnI	chr5	106726529	106736818	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114940.2	ENSG00000252337	179726	LINC01950	ENSG00000251027	78379	None	None
L1FLnI_5q21.3k	L1	L1	L1FLnI	chr5	106770482	106780367	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01950	ENSG00000251027	34830	AC114940.2	ENSG00000252337	223679	None	None
L1FLnI_5q21.3l	L1	L1	L1FLnI	chr5	106898494	106908688	-	coding	LINC01950	lncRNA	SENSE	ENSG00000251027	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:106908298-106908300
L1FLnI_5q21.3m	L1	L1	L1FLnI	chr5	106993825	107003785	-	coding	LINC01950	lncRNA	SENSE	ENSG00000251027	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q21.3n	L1	L1	L1FLnI	chr5	107153987	107164356	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01950	ENSG00000251027	142935	PSMC1P5	ENSG00000250273	30800	None	None
L1FLnI_5q21.3o	L1	L1	L1FLnI	chr5	107155237	107164375	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01950	ENSG00000251027	144185	PSMC1P5	ENSG00000250273	30781	None	None
L1FLnI_5q21.3p	L1	L1	L1FLnI	chr5	108206833	108217251	-	noncoding	FBXL17	protein_coding	SENSE	ENSG00000145743	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q21.3q	L1	L1	L1FLnI	chr5	108274405	108285200	+	coding	FBXL17	protein_coding	ANTISENSE	ENSG00000145743	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q21.3r	L1	L1	L1FLnI	chr5	108422407	108432742	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC133134.1	ENSG00000244245	160867	AC008462.1	ENSG00000286503	4391	None	None
L1FLnI_5q21.3s	L1	L1	L1FLnI	chr5	108422407	108431550	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC133134.1	ENSG00000244245	162059	AC008462.1	ENSG00000286503	4391	None	None
L1FLnI_5q21.3t	L1	L1	L1FLnI	chr5	108487921	108497059	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008462.1	ENSG00000286503	69905	AC133134.1	ENSG00000244245	96550	None	None
L1FLnI_5q21.3u	L1	L1	L1FLnI	chr5	109208019	109218155	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC008467.1	ENSG00000249476	18965	FER	ENSG00000151422	11178	None	None
L1FLI_5q21.3	L1	L1	L1FLI	chr5	109258387	109266432	+	coding	AC008467.1	lncRNA	ANTISENSE	ENSG00000249476	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q21.3v	L1	L1	L1FLnI	chr5	109285719	109296132	+	noncoding	AC008467.1	lncRNA	ANTISENSE	ENSG00000249476	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q21.3w	L1	L1	L1FLnI	chr5	109285719	109296133	+	noncoding	AC008467.1	lncRNA	ANTISENSE	ENSG00000249476	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q21.3x	L1	L1	L1FLnI	chr5	109441122	109451143	-	coding	AC010625.1	processed_pseudogene	SENSE	ENSG00000248867	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q21.3y	L1	L1	L1FLnI	chr5	109453758	109463890	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC010625.1	ENSG00000248867	4695	AC091917.3	ENSG00000251367	3463	None	None
L1FLnI_5q21.3z	L1	L1	L1FLnI	chr5	109535305	109544634	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC091917.1	ENSG00000248440	36197	KRT18P42	ENSG00000214794	43704	None	None
L1FLnI_5q21.3aa	L1	L1	L1FLnI	chr5	109621295	109630645	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC012603.1	ENSG00000271849	57157	KRT18P42	ENSG00000214794	31703	None	None
L1FLnI_5q21.3ba	L1	L1	L1FLnI	chr5	109631442	109640228	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT18P42	ENSG00000214794	41850	AC012603.1	ENSG00000271849	47574	None	None
L1FLnI_5q21.3ca	L1	L1	L1FLnI	chr5	110067709	110076898	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM232	ENSG00000186952	212335	PGAM5P1	ENSG00000253224	182286	None	None
L1FLnI_5q21.3da	L1	L1	L1FLnI	chr5	110117017	110125710	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM232	ENSG00000186952	163523	PGAM5P1	ENSG00000253224	231594	None	None
L1FLnI_5q22.1a	L1	L1	L1FLnI	chr5	110223471	110232748	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGAM5P1	ENSG00000253224	338048	TMEM232	ENSG00000186952	56485	chr5:110225019-110225114	chr5:110232476-110232480
L1FLnI_5q22.1b	L1	L1	L1FLnI	chr5	110278138	110288296	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM232	ENSG00000186952	937	PGAM5P1	ENSG00000253224	392715	None	None
L1FLnI_5q22.1c	L1	L1	L1FLnI	chr5	110278166	110288296	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM232	ENSG00000186952	937	PGAM5P1	ENSG00000253224	392743	None	None
L1FLnI_5q22.1d	L1	L1	L1FLnI	chr5	110300134	110311818	-	noncoding	TMEM232	protein_coding	SENSE	ENSG00000186952	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q22.1e	L1	L1	L1FLnI	chr5	110688816	110698950	+	coding	TMEM232	protein_coding	ANTISENSE	ENSG00000186952	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q22.1f	L1	L1	L1FLnI	chr5	110886566	110896387	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008782.1	ENSG00000270779	11897	SLC25A46	ENSG00000164209	121405	None	None
L1FLnI_5q22.1g	L1	L1	L1FLnI	chr5	110930488	110940619	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC008782.1	ENSG00000270779	21775	BCLAF1P1	ENSG00000248966	7410	None	None
L1FLnI_5q22.1h	L1	L1	L1FLnI	chr5	110982242	110992243	+	coding	AC010395.1,AC010395.2	lncRNA,processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000248428,ENSG00000251627	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q22.1i	L1	L1	L1FLnI	chr5	111026237	111036354	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC010395.1	ENSG00000248428	17338	TSLP	ENSG00000145777	33708	None	None
L1FLnI_5q22.1j	L1	L1	L1FLnI	chr5	111084381	111094408	-	coding	AC008572.1,WDR36	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000253613,ENSG00000134987	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:111092306-111092389,chr5:111092402-111092415
L1FLI_5q22.1	L1	L1	L1FLI	chr5	111301231	111309277	+	coding	CAMK4,AC010275.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000152495,ENSG00000248268	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q22.1k	L1	L1	L1FLnI	chr5	111555935	111564892	-	noncoding	STARD4-AS1	lncRNA	ANTISENSE	ENSG00000246859	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q22.1l	L1	L1	L1FLnI	chr5	111565090	111573707	-	coding	STARD4-AS1,HMGN1P13,AC008967.1	lncRNA,processed_pseudogene,processed_pseudogene	ANTISENSE,SENSE,ANTISENSE	ENSG00000246859,ENSG00000249619,ENSG00000251099	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q22.1m	L1	L1	L1FLnI	chr5	111575014	111584344	-	coding	STARD4-AS1	lncRNA	ANTISENSE	ENSG00000246859	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:111574877-111575161	None
L1FLnI_5q22.1n	L1	L1	L1FLnI	chr5	111710697	111719356	-	noncoding	STARD4-AS1,NREP	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000246859,ENSG00000134986	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:111718593-111718899	None
L1FLnI_5q22.1o	L1	L1	L1FLnI	chr5	111877340	111887482	+	coding	NREP	protein_coding	ANTISENSE	ENSG00000134986	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q22.1p	L1	L1	L1FLnI	chr5	111985505	111995616	-	coding	NREP,NREP-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000134986,ENSG00000250095	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q22.2a	L1	L1	L1FLnI	chr5	112386582	112396757	+	coding	EPB41L4A	protein_coding	ANTISENSE	ENSG00000129595	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q22.2b	L1	L1	L1FLnI	chr5	112432210	112442647	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	EPB41L4A-DT	ENSG00000278921	11232	HMGB3P16	ENSG00000248430	10056	None	None
L1FLnI_5q22.2c	L1	L1	L1FLnI	chr5	112460246	112470382	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC137549.1	ENSG00000251014	76591	HMGB3P16	ENSG00000248430	7257	None	None
L1FLnI_5q22.2d	L1	L1	L1FLnI	chr5	112499797	112510122	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P16	ENSG00000248430	46808	AC137549.1	ENSG00000251014	36851	None	None
L1FLnI_5q22.2e	L1	L1	L1FLnI	chr5	112517983	112527402	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC137549.1	ENSG00000251014	19571	HMGB3P16	ENSG00000248430	64994	None	chr5:112521492-112521520
L1FLnI_5q22.2f	L1	L1	L1FLnI	chr5	112535170	112545603	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P16	ENSG00000248430	82181	AC137549.1	ENSG00000251014	1370	None	None
L1FLnI_5q22.2g	L1	L1	L1FLnI	chr5	112582540	112591043	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC137549.1	ENSG00000251014	35035	LINC02200	ENSG00000250358	37393	None	None
L1FLnI_5q22.2h	L1	L1	L1FLnI	chr5	112672995	112683131	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	APC	ENSG00000134982	24367	LINC02200	ENSG00000250358	30512	None	None
L1FLnI_5q22.2i	L1	L1	L1FLnI	chr5	113072652	113081325	+	noncoding	MCC	protein_coding	ANTISENSE	ENSG00000171444	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:113073301-113073676	None
L1FLnI_5q22.2j	L1	L1	L1FLnI	chr5	113465687	113475799	-	coding	MCC	protein_coding	SENSE	ENSG00000171444	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q22.2k	L1	L1	L1FLnI	chr5	113495793	113507379	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	YTHDC2	ENSG00000047188	6315	RNU4ATAC13P	ENSG00000251741	1833	None	None
L1FLnI_5q22.2l	L1	L1	L1FLnI	chr5	113643477	113652439	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	YTHDC2	ENSG00000047188	48192	AC093240.1	ENSG00000286839	85667	None	None
L1FLnI_5q22.3a	L1	L1	L1FLnI	chr5	114017460	114027882	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093240.1	ENSG00000286839	240623	KCNN2	ENSG00000080709	28044	None	None
L1FLnI_5q22.3b	L1	L1	L1FLnI	chr5	114017460	114027872	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093240.1	ENSG00000286839	240623	KCNN2	ENSG00000080709	28054	None	None
L1FLnI_5q22.3c	L1	L1	L1FLnI	chr5	114156509	114166649	-	coding	KCNN2	protein_coding	ANTISENSE	ENSG00000080709	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q22.3d	L1	L1	L1FLnI	chr5	114272382	114282503	-	noncoding	KCNN2	protein_coding	ANTISENSE	ENSG00000080709	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q22.3e	L1	L1	L1FLnI	chr5	114474847	114483559	+	noncoding	KCNN2,AC010230.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000080709,ENSG00000246316	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q22.3f	L1	L1	L1FLnI	chr5	114530165	114540295	-	coding	AC010230.1	lncRNA	SENSE	ENSG00000246316	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q22.3g	L1	L1	L1FLnI	chr5	114540748	114551070	+	noncoding	AC010230.1	lncRNA	ANTISENSE	ENSG00000246316	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q22.3h	L1	L1	L1FLnI	chr5	114594535	114604825	+	noncoding	AC010230.1	lncRNA	ANTISENSE	ENSG00000246316	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q22.3i	L1	L1	L1FLnI	chr5	114667373	114677400	+	coding	AC010230.1	lncRNA	ANTISENSE	ENSG00000246316	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q22.3j	L1	L1	L1FLnI	chr5	114760189	114770536	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC094104.2	ENSG00000251132	260737	AC010230.1	ENSG00000246316	91779	None	None
L1FLnI_5q22.3k	L1	L1	L1FLnI	chr5	114812633	114822896	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC094104.2	ENSG00000251132	208377	AC010230.1	ENSG00000246316	144223	None	None
L1FLnI_5q22.3l	L1	L1	L1FLnI	chr5	114825706	114836220	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010230.1	ENSG00000246316	157296	AC094104.2	ENSG00000251132	195053	None	None
L1FLnI_5q22.3m	L1	L1	L1FLnI	chr5	114840926	114851058	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC010230.1	ENSG00000246316	172516	AC094104.2	ENSG00000251132	180215	None	None
L1FLnI_5q22.3n	L1	L1	L1FLnI	chr5	114862930	114873369	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010230.1	ENSG00000246316	194520	AC094104.2	ENSG00000251132	157904	None	None
L1FLnI_5q22.3o	L1	L1	L1FLnI	chr5	114872396	114882891	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010230.1	ENSG00000246316	203986	AC094104.2	ENSG00000251132	148382	None	None
L1FLnI_5q22.3p	L1	L1	L1FLnI	chr5	114890758	114899298	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC094104.2	ENSG00000251132	131975	AC010230.1	ENSG00000246316	222348	None	None
L1FLnI_5q22.3q	L1	L1	L1FLnI	chr5	114914189	114923063	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC094104.2	ENSG00000251132	108210	AC010230.1	ENSG00000246316	245779	None	None
L1FLnI_5q22.3r	L1	L1	L1FLnI	chr5	115113815	115123908	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC094104.1	ENSG00000250242	25340	TRIM36	ENSG00000152503	854	None	None
L1FLnI_5q22.3s	L1	L1	L1FLnI	chr5	115113815	115123917	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC094104.1	ENSG00000250242	25340	TRIM36	ENSG00000152503	845	None	None
L1FLnI_5q22.3t	L1	L1	L1FLnI	chr5	115438414	115448715	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AK3P4	ENSG00000248722	35452	AC008628.2	ENSG00000249944	40919	None	None
L1FLnI_5q22.3u	L1	L1	L1FLnI	chr5	115671020	115681203	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMED7	ENSG00000134970	38028	AC008549.2	ENSG00000249021	10259	None	None
L1FLnI_5q22.3v	L1	L1	L1FLnI	chr5	115739555	115750469	-	noncoding	AC008549.1	lncRNA	ANTISENSE	ENSG00000248709	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q22.3w	L1	L1	L1FLnI	chr5	115876699	115887167	-	noncoding	AP3S1	protein_coding	ANTISENSE	ENSG00000177879	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.1a	L1	L1	L1FLnI	chr5	116120484	116129320	-	coding	COMMD10	protein_coding	ANTISENSE	ENSG00000145781	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.1b	L1	L1	L1FLnI	chr5	116162986	116172482	+	noncoding	COMMD10	protein_coding	SENSE	ENSG00000145781	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.1c	L1	L1	L1FLnI	chr5	116187617	116196217	+	noncoding	COMMD10,RNU6-644P	protein_coding,snRNA	SENSE,ANTISENSE	ENSG00000145781,ENSG00000212457	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.1d	L1	L1	L1FLnI	chr5	117111298	117121423	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL35AP15	ENSG00000243758	179681	AC093534.2	ENSG00000250949	72729	None	None
L1FLnI_5q23.1e	L1	L1	L1FLnI	chr5	117337755	117347786	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00992	ENSG00000248663	67723	AC093295.1	ENSG00000285809	7606	None	None
L1FLnI_5q23.1f	L1	L1	L1FLnI	chr5	117527100	117537125	-	coding	LINC00992	lncRNA	ANTISENSE	ENSG00000248663	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.1g	L1	L1	L1FLnI	chr5	118285833	118295460	-	noncoding	LINC02208	lncRNA	SENSE	ENSG00000250891	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.1h	L1	L1	L1FLnI	chr5	118379473	118389564	+	coding	LINC02208	lncRNA	ANTISENSE	ENSG00000250891	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.1i	L1	L1	L1FLnI	chr5	118497351	118506412	-	noncoding	LINC02208	lncRNA	SENSE	ENSG00000250891	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.1j	L1	L1	L1FLnI	chr5	118713149	118721882	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC114311.1	ENSG00000286745	84971	RNU7-34P	ENSG00000238904	36329	None	None
L1FLnI_5q23.1k	L1	L1	L1FLnI	chr5	119293546	119303763	-	coding	TNFAIP8	protein_coding	ANTISENSE	ENSG00000145779	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.1l	L1	L1	L1FLnI	chr5	119435681	119445696	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TNFAIP8	ENSG00000145779	35993	RNA5SP190	ENSG00000202092	20	None	None
L1FLnI_5q23.1m	L1	L1	L1FLnI	chr5	119595833	119605964	+	noncoding	HSD17B4	protein_coding	SENSE	ENSG00000133835	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.1n	L1	L1	L1FLnI	chr5	119617634	119627908	-	noncoding	HSD17B4	protein_coding	ANTISENSE	ENSG00000133835	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.1o	L1	L1	L1FLnI	chr5	119684287	119694314	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC008574.1	ENSG00000251293	551134	AC008550.1	ENSG00000234259	3207	None	None
L1FLnI_5q23.1p	L1	L1	L1FLnI	chr5	119906799	119917754	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008574.1	ENSG00000251293	327694	AC008550.1	ENSG00000234259	225719	None	None
L1FLnI_5q23.1q	L1	L1	L1FLnI	chr5	119918862	119927544	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008574.1	ENSG00000251293	317904	AC008550.1	ENSG00000234259	237782	None	None
L1FLnI_5q23.1r	L1	L1	L1FLnI	chr5	119987274	119995792	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008574.1	ENSG00000251293	249656	AC008550.1	ENSG00000234259	306194	None	None
L1FLnI_5q23.1s	L1	L1	L1FLnI	chr5	120126363	120136528	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC008574.1	ENSG00000251293	108920	AC008550.1	ENSG00000234259	445283	None	None
L1FLnI_5q23.1t	L1	L1	L1FLnI	chr5	120126446	120136528	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC008574.1	ENSG00000251293	108920	AC008550.1	ENSG00000234259	445366	None	None
L1FLnI_5q23.1u	L1	L1	L1FLnI	chr5	120175548	120185673	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC008574.1	ENSG00000251293	59775	AC008550.1	ENSG00000234259	494468	None	None
L1FLnI_5q23.1v	L1	L1	L1FLnI	chr5	120230924	120240041	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008574.1	ENSG00000251293	5407	AC008550.1	ENSG00000234259	549844	chr5:120238961-120239447	chr5:120239171-120239199
L1FLnI_5q23.1w	L1	L1	L1FLnI	chr5	120420710	120430733	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PRR16	ENSG00000184838	33567	AC113418.1	ENSG00000261036	9741	None	None
L1FLnI_5q23.1x	L1	L1	L1FLnI	chr5	120426738	120435914	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRR16	ENSG00000184838	28386	AC113418.1	ENSG00000261036	15769	None	None
L1FLnI_5q23.1y	L1	L1	L1FLnI	chr5	120485150	120494696	-	coding	PRR16	protein_coding	ANTISENSE	ENSG00000184838	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.1z	L1	L1	L1FLnI	chr5	120600069	120609556	-	noncoding	PRR16	protein_coding	ANTISENSE	ENSG00000184838	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:120604931-120605266	None
L1FLnI_5q23.1aa	L1	L1	L1FLnI	chr5	120827927	120837463	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC114284.1	ENSG00000248927	37149	AC008565.1	ENSG00000251135	202627	None	None
L1FLnI_5q23.1ba	L1	L1	L1FLnI	chr5	121060737	121070741	+	coding	AC113352.1	processed_pseudogene	SENSE	ENSG00000248853	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.1ca	L1	L1	L1FLnI	chr5	121257871	121267858	-	noncoding	AC008568.1	lncRNA	ANTISENSE	ENSG00000229855	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.1da	L1	L1	L1FLnI	chr5	121531037	121541186	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008568.2	ENSG00000279860	165723	RPL23AP44	ENSG00000244088	34662	None	None
L1FLnI_5q23.1ea	L1	L1	L1FLnI	chr5	121598531	121607824	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL23AP44	ENSG00000244088	22211	AC106806.1	ENSG00000213661	8423	None	None
L1FLnI_5q23.1fa	L1	L1	L1FLnI	chr5	121644193	121653381	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC106806.2	ENSG00000249600	17992	AC106806.1	ENSG00000213661	27386	None	None
L1FLnI_5q23.1ga	L1	L1	L1FLnI	chr5	121656403	121666548	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC106806.1	ENSG00000213661	39596	AC106806.2	ENSG00000249600	4825	None	None
L1FLnI_5q23.1ha	L1	L1	L1FLnI	chr5	121807584	121817164	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FTMT	ENSG00000181867	34718	AC106806.2	ENSG00000249600	135712	None	None
L1FLnI_5q23.1ia	L1	L1	L1FLnI	chr5	121822970	121833357	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FTMT	ENSG00000181867	18525	AC106806.2	ENSG00000249600	151098	None	None
L1FLnI_5q23.1ja	L1	L1	L1FLnI	chr5	122049433	122058035	-	coding	SRFBP1	protein_coding	ANTISENSE	ENSG00000151304	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2a	L1	L1	L1FLnI	chr5	122201540	122211053	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC010255.3	ENSG00000250803	17591	AC113349.2	ENSG00000272139	100244	None	None
L1ORF2_5q23.2	L1	L1	L1ORF2	chr5	122237890	122245939	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC010255.3	ENSG00000250803	53941	AC113349.2	ENSG00000272139	65358	None	None
L1FLnI_5q23.2b	L1	L1	L1FLnI	chr5	122246334	122256699	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113349.2	ENSG00000272139	54598	AC010255.3	ENSG00000250803	62385	None	None
L1FLnI_5q23.2c	L1	L1	L1FLnI	chr5	122246338	122256281	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113349.2	ENSG00000272139	55016	AC010255.3	ENSG00000250803	62389	None	None
L1FLnI_5q23.2d	L1	L1	L1FLnI	chr5	122263212	122273723	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010255.3	ENSG00000250803	79263	AC113349.2	ENSG00000272139	37574	None	None
L1FLnI_5q23.2e	L1	L1	L1FLnI	chr5	122377046	122387063	-	coding	SNCAIP,AC119150.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000064692,ENSG00000249916	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2f	L1	L1	L1FLnI	chr5	122509115	122519139	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02201	ENSG00000251538	109813	AC022101.1	ENSG00000250328	30028	None	None
L1FLnI_5q23.2g	L1	L1	L1FLnI	chr5	122592044	122602162	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02201	ENSG00000251538	26790	AC022101.1	ENSG00000250328	112957	None	None
L1FLnI_5q23.2h	L1	L1	L1FLnI	chr5	122630393	122640433	-	noncoding	LINC02201	lncRNA	SENSE	ENSG00000251538	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2i	L1	L1	L1FLnI	chr5	123236113	123246116	-	coding	AC010493.1	processed_pseudogene	ANTISENSE	ENSG00000213655	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2j	L1	L1	L1FLnI	chr5	123250434	123260562	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CEP120	ENSG00000168944	84323	AC010493.1	ENSG00000213655	14064	None	None
L1FLnI_5q23.2k	L1	L1	L1FLnI	chr5	123314024	123324269	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CEP120	ENSG00000168944	20616	AC010493.1	ENSG00000213655	77654	None	None
L1FLnI_5q23.2l	L1	L1	L1FLnI	chr5	123324145	123332862	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CEP120	ENSG00000168944	12023	AC010493.1	ENSG00000213655	87775	None	None
L1FLnI_5q23.2m	L1	L1	L1FLnI	chr5	123328851	123339310	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CEP120	ENSG00000168944	5575	AC010493.1	ENSG00000213655	92481	None	None
L1FLnI_5q23.2n	L1	L1	L1FLnI	chr5	123625495	123635329	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CSNK1G3	ENSG00000151292	8450	KRT18P16	ENSG00000235275	781	None	None
L1FLnI_5q23.2o	L1	L1	L1FLnI	chr5	123625936	123635329	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CSNK1G3	ENSG00000151292	8891	KRT18P16	ENSG00000235275	781	None	None
L1FLnI_5q23.2p	L1	L1	L1FLnI	chr5	123674078	123684205	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01170	ENSG00000253807	375589	KRT18P16	ENSG00000235275	36675	None	None
L1FLnI_5q23.2q	L1	L1	L1FLnI	chr5	123674088	123684205	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01170	ENSG00000253807	375589	KRT18P16	ENSG00000235275	36685	None	None
L1FLnI_5q23.2r	L1	L1	L1FLnI	chr5	123720960	123729607	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT18P16	ENSG00000235275	83557	LINC01170	ENSG00000253807	330187	None	chr5:123721964-123721971
L1FLnI_5q23.2s	L1	L1	L1FLnI	chr5	123982566	123992624	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01170	ENSG00000253807	67170	KRT18P16	ENSG00000235275	345163	None	chr5:123982896-123982899
L1FLnI_5q23.2t	L1	L1	L1FLnI	chr5	124209673	124219814	+	coding	LINC01170	lncRNA	ANTISENSE	ENSG00000253807	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2u	L1	L1	L1FLnI	chr5	124241553	124250234	+	noncoding	LINC01170	lncRNA	ANTISENSE	ENSG00000253807	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2v	L1	L1	L1FLnI	chr5	124354754	124364901	+	coding	LINC01170	lncRNA	ANTISENSE	ENSG00000253807	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2w	L1	L1	L1FLnI	chr5	124419657	124429775	+	coding	LINC01170	lncRNA	ANTISENSE	ENSG00000253807	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2x	L1	L1	L1FLnI	chr5	125156893	125167350	+	noncoding	LINC02240	lncRNA	SENSE	ENSG00000260192	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2y	L1	L1	L1FLnI	chr5	125352369	125362001	-	coding	LINC02240,AC116362.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000260192,ENSG00000248752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2z	L1	L1	L1FLnI	chr5	125358502	125368532	-	coding	LINC02240,AC116362.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000260192,ENSG00000248752	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2aa	L1	L1	L1FLnI	chr5	125639166	125648851	+	noncoding	AC116362.1	lncRNA	ANTISENSE	ENSG00000248752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2ba	L1	L1	L1FLnI	chr5	125726878	125736952	+	noncoding	AC116362.1	lncRNA	ANTISENSE	ENSG00000248752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2ca	L1	L1	L1FLnI	chr5	125764151	125774612	-	noncoding	AC116362.1	lncRNA	SENSE	ENSG00000248752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2da	L1	L1	L1FLnI	chr5	125908702	125917783	-	noncoding	AC116362.1	lncRNA	SENSE	ENSG00000248752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2ea	L1	L1	L1FLnI	chr5	125917914	125928064	-	coding	AC116362.1	lncRNA	SENSE	ENSG00000248752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2fa	L1	L1	L1FLnI	chr5	125981901	125992620	-	noncoding	AC116362.1	lncRNA	SENSE	ENSG00000248752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2ga	L1	L1	L1FLnI	chr5	125981901	125990599	-	noncoding	AC116362.1	lncRNA	SENSE	ENSG00000248752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2ha	L1	L1	L1FLnI	chr5	126023255	126032131	+	noncoding	AC116362.1	lncRNA	ANTISENSE	ENSG00000248752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2ia	L1	L1	L1FLnI	chr5	126083076	126092604	+	coding	AC116362.1	lncRNA	ANTISENSE	ENSG00000248752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2ja	L1	L1	L1FLnI	chr5	126149305	126159446	-	coding	AC116362.1	lncRNA	SENSE	ENSG00000248752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2ka	L1	L1	L1FLnI	chr5	126168141	126178495	+	noncoding	AC116362.1	lncRNA	ANTISENSE	ENSG00000248752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2la	L1	L1	L1FLnI	chr5	126288421	126297123	+	noncoding	AC116362.1	lncRNA	ANTISENSE	ENSG00000248752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2ma	L1	L1	L1FLnI	chr5	126889788	126899833	-	coding	MARCHF3	protein_coding	SENSE	ENSG00000173926	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2na	L1	L1	L1FLnI	chr5	126903312	126913317	-	coding	MARCHF3	protein_coding	SENSE	ENSG00000173926	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2oa	L1	L1	L1FLnI	chr5	127102605	127112754	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MRPS5P3	ENSG00000214743	30328	AC005915.1	ENSG00000279446	27001	None	None
L1FLnI_5q23.2pa	L1	L1	L1FLnI	chr5	127193644	127203792	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC011416.2	ENSG00000250956	13744	AC011416.3	ENSG00000283897	11367	None	None
L1FLnI_5q23.2qa	L1	L1	L1FLnI	chr5	127733433	127743452	-	coding	CCDC192	protein_coding	ANTISENSE	ENSG00000230561	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.2ra	L1	L1	L1FLnI	chr5	127746610	127756635	-	coding	CCDC192	protein_coding	ANTISENSE	ENSG00000230561	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.3a	L1	L1	L1FLnI	chr5	128040428	128050515	+	noncoding	LINC01184	lncRNA	ANTISENSE	ENSG00000245937	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.3b	L1	L1	L1FLnI	chr5	128229161	128238923	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FBN2	ENSG00000138829	18986	SLC12A2	ENSG00000064651	39484	None	None
L1FLnI_5q23.3c	L1	L1	L1FLnI	chr5	128293348	128303349	-	coding	FBN2	protein_coding	SENSE	ENSG00000138829	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.3d	L1	L1	L1FLnI	chr5	128452013	128462494	+	noncoding	FBN2	protein_coding	ANTISENSE	ENSG00000138829	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:128455985-128455991
L1FLnI_5q23.3e	L1	L1	L1FLnI	chr5	128649500	128659929	-	noncoding	FBN2,SLC27A6	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000138829,ENSG00000113396	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.3f	L1	L1	L1FLnI	chr5	128842100	128853207	+	coding	SLC27A6	protein_coding	SENSE	ENSG00000113396	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.3g	L1	L1	L1FLnI	chr5	128937139	128947255	-	coding	SLC27A6	protein_coding	ANTISENSE	ENSG00000113396	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.3h	L1	L1	L1FLnI	chr5	128956215	128965993	-	coding	SLC27A6	protein_coding	ANTISENSE	ENSG00000113396	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:128965090-128965101,chr5:128965117-128965124,chr5:128965158-128965181,chr5:128965471-128965494,chr5:128965496-128965534,chr5:128965539-128965565,chr5:128965586-128965590
L1FLnI_5q23.3i	L1	L1	L1FLnI	chr5	128967267	128977407	-	noncoding	SLC27A6	protein_coding	ANTISENSE	ENSG00000113396	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.3j	L1	L1	L1FLnI	chr5	129157411	129165978	-	noncoding	AC008679.1	lncRNA	ANTISENSE	ENSG00000286274	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.3k	L1	L1	L1FLnI	chr5	129180590	129190297	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4460	ENSG00000265691	206765	AC008679.1	ENSG00000286274	7333	None	None
L1FLnI_5q23.3l	L1	L1	L1FLnI	chr5	129284748	129294857	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4460	ENSG00000265691	102205	AC008679.1	ENSG00000286274	111491	None	None
L1FLnI_5q23.3m	L1	L1	L1FLnI	chr5	129411814	129420834	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4460	ENSG00000265691	14667	ADAMTS19-AS1	ENSG00000249421	3948	None	None
L1FLnI_5q23.3n	L1	L1	L1FLnI	chr5	129513143	129522580	-	coding	ADAMTS19,AC008591.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000145808,ENSG00000251680	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.3o	L1	L1	L1FLnI	chr5	130003809	130012929	+	noncoding	CHSY3	protein_coding	SENSE	ENSG00000198108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.3p	L1	L1	L1FLnI	chr5	130470924	130479764	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARL2BPP4	ENSG00000249312	49655	RNU7-53P	ENSG00000252514	84244	None	None
L1FLnI_5q23.3q	L1	L1	L1FLnI	chr5	130553423	130563020	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARL2BPP4	ENSG00000249312	23534	AC005741.1	ENSG00000249418	35328	None	None
L1FLnI_5q23.3r	L1	L1	L1FLnI	chr5	130728596	130738627	+	coding	AC006525.1	lncRNA	ANTISENSE	ENSG00000287390	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.3s	L1	L1	L1FLnI	chr5	130728596	130738609	+	coding	AC006525.1	lncRNA	ANTISENSE	ENSG00000287390	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.3t	L1	L1	L1FLnI	chr5	130779992	130790157	+	noncoding	AC006525.1	lncRNA	ANTISENSE	ENSG00000287390	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.3u	L1	L1	L1FLnI	chr5	130814239	130824263	+	coding	AC006525.1	lncRNA	ANTISENSE	ENSG00000287390	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.3v	L1	L1	L1FLnI	chr5	130814239	130824281	+	coding	AC006525.1	lncRNA	ANTISENSE	ENSG00000287390	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.3w	L1	L1	L1FLnI	chr5	130894068	130904169	+	coding	AC006525.1	lncRNA	ANTISENSE	ENSG00000287390	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.3x	L1	L1	L1FLnI	chr5	130926203	130935682	+	coding	AC006525.1	lncRNA	ANTISENSE	ENSG00000287390	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q23.3y	L1	L1	L1FLnI	chr5	131014165	131024111	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HINT1	ENSG00000169567	134916	AC113367.2	ENSG00000248955	5423	None	chr5:131019866-131019884
L1FLnI_5q23.3z	L1	L1	L1FLnI	chr5	131028223	131038357	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HINT1	ENSG00000169567	120670	AC113367.2	ENSG00000248955	19481	None	None
L1FLnI_5q23.3aa	L1	L1	L1FLnI	chr5	131083656	131093815	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC113367.2	ENSG00000248955	74914	HINT1	ENSG00000169567	65212	None	None
L1FLnI_5q23.3ba	L1	L1	L1FLnI	chr5	131132427	131142509	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HINT1	ENSG00000169567	16518	AC113367.2	ENSG00000248955	123685	None	None
L1FLnI_5q31.1a	L1	L1	L1FLnI	chr5	131307577	131316467	-	coding	CDC42SE2	protein_coding	ANTISENSE	ENSG00000158985	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:131312334-131312367
L1FLnI_5q31.1b	L1	L1	L1FLnI	chr5	131331468	131341603	-	coding	CDC42SE2	protein_coding	ANTISENSE	ENSG00000158985	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q31.1c	L1	L1	L1FLnI	chr5	131340553	131349649	+	noncoding	CDC42SE2	protein_coding	SENSE	ENSG00000158985	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q31.1d	L1	L1	L1FLnI	chr5	131723218	131733076	-	coding	AC008695.1,FNIP1	protein_coding,protein_coding	SENSE,SENSE	ENSG00000273217,ENSG00000217128	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q31.1e	L1	L1	L1FLnI	chr5	131835403	131844944	-	noncoding	MEIKIN,AC034228.3	protein_coding,protein_coding	SENSE,SENSE	ENSG00000239642,ENSG00000281938	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q31.1f	L1	L1	L1FLnI	chr5	131867515	131877656	+	coding	MEIKIN,AC034228.3	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000239642,ENSG00000281938	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q31.1g	L1	L1	L1FLnI	chr5	131887212	131897238	-	coding	MEIKIN,AC034228.3	protein_coding,protein_coding	SENSE,SENSE	ENSG00000239642,ENSG00000281938	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q31.1h	L1	L1	L1FLnI	chr5	131893241	131902564	-	coding	MEIKIN,AC034228.3	protein_coding,protein_coding	SENSE,SENSE	ENSG00000239642,ENSG00000281938	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q31.1i	L1	L1	L1FLnI	chr5	132037230	132048163	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IL3	ENSG00000164399	12492	AC034228.1	ENSG00000231585	24031	None	None
L1FLnI_5q31.1j	L1	L1	L1FLnI	chr5	132112982	132123338	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC034216.1	ENSG00000253067	32849	AC063976.3	ENSG00000227616	24153	chr5:132114467-132114718	None
L1FLnI_5q31.1k	L1	L1	L1FLnI	chr5	132122948	132133352	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC063976.3	ENSG00000227616	14139	AC034216.1	ENSG00000253067	42815	None	None
L1FLnI_5q31.1l	L1	L1	L1FLnI	chr5	132394350	132403647	+	noncoding	SLC22A5	protein_coding	SENSE	ENSG00000197375	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr5:132395227-132395231
L1ORF2_5q31.1	L1	L1	L1ORF2	chr5	132512964	132521010	+	coding	AC116366.3	protein_coding	SENSE	ENSG00000283782	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q31.1m	L1	L1	L1FLnI	chr5	133132605	133141136	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC010307.2	ENSG00000248245	19302	AC113410.3	ENSG00000251616	18130	None	None
L1FLnI_5q31.1n	L1	L1	L1FLnI	chr5	133132614	133141136	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC010307.2	ENSG00000248245	19302	AC113410.3	ENSG00000251616	18139	None	None
L1FLnI_5q31.1o	L1	L1	L1FLnI	chr5	133165447	133174861	-	noncoding	AC010307.2,AC010307.1	lncRNA,processed_pseudogene	ANTISENSE,SENSE	ENSG00000248245,ENSG00000240611	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q31.1p	L1	L1	L1FLnI	chr5	133180213	133189659	-	coding	AC010307.2	lncRNA	ANTISENSE	ENSG00000248245	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q31.1q	L1	L1	L1FLnI	chr5	133579790	133589799	+	coding	FSTL4	protein_coding	ANTISENSE	ENSG00000053108	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q31.1r	L1	L1	L1FLnI	chr5	134330809	134340985	-	coding	AC104109.4,CDKL3	lncRNA,protein_coding	SENSE,SENSE	ENSG00000273345,ENSG00000006837	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q31.1s	L1	L1	L1FLnI	chr5	134997426	135007596	-	noncoding	PCBD2,CATSPER3	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000132570,ENSG00000152705	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q31.1t	L1	L1	L1FLnI	chr5	136285673	136295799	+	noncoding	TRPC7	protein_coding	ANTISENSE	ENSG00000069018	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:136287684-136287688
L1FLnI_5q31.1u	L1	L1	L1FLnI	chr5	136551529	136560881	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC109439.2	ENSG00000250284	173949	AC112178.1	ENSG00000249803	30097	None	None
L1FLnI_5q31.1v	L1	L1	L1FLnI	chr5	136782301	136792329	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC109439.1	ENSG00000248616	65299	AC109439.2	ENSG00000250284	18892	None	None
L1FLnI_5q31.1w	L1	L1	L1FLnI	chr5	136822530	136832650	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC109439.1	ENSG00000248616	24978	AC109439.2	ENSG00000250284	59121	None	None
L1FLnI_5q31.1x	L1	L1	L1FLnI	chr5	136847878	136857102	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC109439.1	ENSG00000248616	526	AC109439.2	ENSG00000250284	84469	None	None
L1FLnI_5q31.2a	L1	L1	L1FLnI	chr5	136941983	136951078	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP193	ENSG00000222285	18122	AC109439.1	ENSG00000248616	83641	None	None
L1FLnI_5q31.2b	L1	L1	L1FLnI	chr5	137044144	137054156	-	coding	SPOCK1	protein_coding	SENSE	ENSG00000152377	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q31.2c	L1	L1	L1FLnI	chr5	137417305	137427419	-	coding	SPOCK1	protein_coding	SENSE	ENSG00000152377	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:137425958-137425964
L1FLnI_5q31.2d	L1	L1	L1FLnI	chr5	137779871	137789595	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC106791.2	ENSG00000270697	17935	NPY6R	ENSG00000226306	11598	None	None
L1FLnI_5q31.2e	L1	L1	L1FLnI	chr5	137965097	137975122	+	coding	FAM13B	protein_coding	ANTISENSE	ENSG00000031003	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q31.2f	L1	L1	L1FLnI	chr5	138678175	138688327	-	coding	CTNNA1	protein_coding	ANTISENSE	ENSG00000044115	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_5q31.2	L1	L1	L1FLI	chr5	139004439	139012491	-	coding	SIL1,AC011405.2,RNA5SP194	protein_coding,rRNA_pseudogene,rRNA	SENSE,ANTISENSE,ANTISENSE	ENSG00000120725,ENSG00000285956,ENSG00000201532	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q31.3a	L1	L1	L1FLnI	chr5	140448536	140458361	+	coding	ANKHD1,ANKHD1-EIF4EBP3	protein_coding,protein_coding	SENSE,SENSE	ENSG00000131503,ENSG00000254996	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q31.3b	L1	L1	L1FLnI	chr5	140512018	140521442	+	coding	ANKHD1,ANKHD1-EIF4EBP3	protein_coding,protein_coding	SENSE,SENSE	ENSG00000131503,ENSG00000254996	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:140513401-140513417
L1FLnI_5q31.3c	L1	L1	L1FLnI	chr5	142985018	142995090	-	coding	ARHGAP26	protein_coding	ANTISENSE	ENSG00000145819	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:142994472-142994497
L1FLnI_5q31.3d	L1	L1	L1FLnI	chr5	143848582	143858714	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC008696.2	ENSG00000249881	19810	RN7SL87P	ENSG00000239390	282165	None	None
L1FLnI_5q31.3e	L1	L1	L1FLnI	chr5	143943736	143952413	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL87P	ENSG00000239390	188466	AC008696.2	ENSG00000249881	114964	None	None
L1FLnI_5q31.3f	L1	L1	L1FLnI	chr5	144049447	144059562	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL87P	ENSG00000239390	81317	AC008696.2	ENSG00000249881	220675	None	None
L1FLnI_5q31.3g	L1	L1	L1FLnI	chr5	144072062	144081549	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008696.2	ENSG00000249881	243290	RN7SL87P	ENSG00000239390	59330	None	None
L1FLnI_5q31.3h	L1	L1	L1FLnI	chr5	144623316	144633201	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC132803.1	ENSG00000251031	223689	RN7SKP246	ENSG00000201423	87646	None	None
L1FLnI_5q31.3i	L1	L1	L1FLnI	chr5	144709778	144718581	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP246	ENSG00000201423	174108	AC132803.1	ENSG00000251031	138309	None	None
L1FLnI_5q31.3j	L1	L1	L1FLnI	chr5	144724819	144736409	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC132803.1	ENSG00000251031	120481	RN7SKP246	ENSG00000201423	189149	None	None
L1FLnI_5q31.3k	L1	L1	L1FLnI	chr5	144822848	144831757	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC132803.1	ENSG00000251031	25133	RN7SKP246	ENSG00000201423	287178	None	None
L1FLnI_5q32a	L1	L1	L1FLnI	chr5	145327288	145337730	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC137770.1	ENSG00000250842	202	ASS1P10	ENSG00000215325	97234	None	None
L1FLnI_5q32b	L1	L1	L1FLnI	chr5	145375428	145383952	-	coding	AC137770.1	lncRNA	SENSE	ENSG00000250842	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q32c	L1	L1	L1FLnI	chr5	145418234	145428248	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC008700.1	ENSG00000248125	1563	AC137770.1	ENSG00000250842	36564	None	None
L1FLnI_5q32d	L1	L1	L1FLnI	chr5	145508865	145518645	+	coding	PRELID2	protein_coding	ANTISENSE	ENSG00000186314	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q32e	L1	L1	L1FLnI	chr5	145508865	145518635	+	coding	PRELID2	protein_coding	ANTISENSE	ENSG00000186314	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q32f	L1	L1	L1FLnI	chr5	145604443	145613912	-	noncoding	PRELID2	protein_coding	SENSE	ENSG00000186314	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q32g	L1	L1	L1FLnI	chr5	145641013	145651497	-	coding	PRELID2	protein_coding	SENSE	ENSG00000186314	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q32h	L1	L1	L1FLnI	chr5	145647283	145657411	+	coding	PRELID2	protein_coding	ANTISENSE	ENSG00000186314	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q32i	L1	L1	L1FLnI	chr5	145874262	145883684	+	noncoding	GRXCR2	protein_coding	ANTISENSE	ENSG00000204928	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q32j	L1	L1	L1FLnI	chr5	145887649	145897836	+	noncoding	GRXCR2	protein_coding	ANTISENSE	ENSG00000204928	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q32k	L1	L1	L1FLnI	chr5	145887649	145897747	+	noncoding	GRXCR2	protein_coding	ANTISENSE	ENSG00000204928	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_5q32	L1	L1	L1FLI	chr5	146608479	146616530	+	coding	AC008728.1,PPP2R2B	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000250407,ENSG00000156475	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q32l	L1	L1	L1FLnI	chr5	146982973	146991850	+	coding	PPP2R2B	protein_coding	ANTISENSE	ENSG00000156475	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q32m	L1	L1	L1FLnI	chr5	147276369	147286923	+	noncoding	STK32A	protein_coding	SENSE	ENSG00000169302	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q32n	L1	L1	L1FLnI	chr5	147605008	147615140	-	noncoding	JAKMIP2-AS1,JAKMIP2	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000280780,ENSG00000176049	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q32o	L1	L1	L1FLnI	chr5	147715347	147725372	-	coding	JAKMIP2	protein_coding	SENSE	ENSG00000176049	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q32p	L1	L1	L1FLnI	chr5	147940620	147950633	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SPINK5	ENSG00000133710	75050	EEF1GP2	ENSG00000250346	17199	None	None
L1FLnI_5q32q	L1	L1	L1FLnI	chr5	148072070	148082285	+	noncoding	SPINK5	protein_coding	SENSE	ENSG00000133710	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q32r	L1	L1	L1FLnI	chr5	148227104	148237090	+	coding	AC011346.1,MARCOL	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000247199,ENSG00000248109	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chr5:148236738-148237269	None
L1FLnI_5q32s	L1	L1	L1FLnI	chr5	148254483	148263408	-	noncoding	AC011346.1	lncRNA	SENSE	ENSG00000247199	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q32t	L1	L1	L1FLnI	chr5	148275462	148285244	-	noncoding	AC011346.1,SPINK13	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000247199,ENSG00000214510	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q32u	L1	L1	L1FLnI	chr5	148498586	148508034	+	coding	HTR4	protein_coding	ANTISENSE	ENSG00000164270	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q32v	L1	L1	L1FLnI	chr5	148530673	148540878	+	noncoding	HTR4	protein_coding	ANTISENSE	ENSG00000164270	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q32w	L1	L1	L1FLnI	chr5	148606781	148616191	+	coding	HTR4	protein_coding	ANTISENSE	ENSG00000164270	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q32x	L1	L1	L1FLnI	chr5	148667707	148677844	-	coding	HTR4	protein_coding	SENSE	ENSG00000164270	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q32y	L1	L1	L1FLnI	chr5	148684139	148693047	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HTR4	ENSG00000164270	6904	ADRB2	ENSG00000169252	132198	None	None
L1FLnI_5q32z	L1	L1	L1FLnI	chr5	148753405	148763059	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADRB2	ENSG00000169252	62186	HTR4	ENSG00000164270	76170	None	None
L1FLnI_5q32aa	L1	L1	L1FLnI	chr5	148888436	148898103	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADRB2	ENSG00000169252	59749	SH3TC2	ENSG00000169247	25536	None	None
L1FLnI_5q32ba	L1	L1	L1FLnI	chr5	148938775	148948790	+	coding	SH3TC2	protein_coding	ANTISENSE	ENSG00000169247	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.1a	L1	L1	L1FLnI	chr5	150730608	150739411	+	noncoding	DCTN4	protein_coding	ANTISENSE	ENSG00000132912	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr5:150731781-150731799,chr5:150731801-150731815,chr5:150734655-150734678
L1FLnI_5q33.1b	L1	L1	L1FLnI	chr5	150739339	150749450	+	coding	DCTN4	protein_coding	ANTISENSE	ENSG00000132912	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.1c	L1	L1	L1FLnI	chr5	150960641	150970775	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC022106.1	ENSG00000274235	8181	AC022106.2	ENSG00000277866	7644	None	None
L1FLnI_5q33.1d	L1	L1	L1FLnI	chr5	151388914	151399056	-	noncoding	AC034205.2	transcribed_unprocessed_pseudogene	SENSE	ENSG00000253897	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.1e	L1	L1	L1FLnI	chr5	151977687	151986456	-	noncoding	LINC01933	lncRNA	ANTISENSE	ENSG00000254226	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:151984947-151984950
L1FLnI_5q33.1f	L1	L1	L1FLnI	chr5	151985409	151995540	+	coding	LINC01933	lncRNA	SENSE	ENSG00000254226	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.1g	L1	L1	L1FLnI	chr5	152020180	152029108	-	noncoding	LINC01933	lncRNA	ANTISENSE	ENSG00000254226	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.1h	L1	L1	L1FLnI	chr5	152032817	152043261	-	noncoding	LINC01933	lncRNA	ANTISENSE	ENSG00000254226	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.1i	L1	L1	L1FLnI	chr5	152073370	152083369	+	coding	LINC01933	lncRNA	SENSE	ENSG00000254226	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.1j	L1	L1	L1FLnI	chr5	152153790	152164259	-	noncoding	LINC01933	lncRNA	ANTISENSE	ENSG00000254226	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.1k	L1	L1	L1FLnI	chr5	152203802	152213833	+	coding	LINC01933	lncRNA	SENSE	ENSG00000254226	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.1l	L1	L1	L1FLnI	chr5	152339522	152349552	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC008571.2	ENSG00000286749	25446	LINC01933	ENSG00000254226	69073	None	None
L1FLnI_5q33.1m	L1	L1	L1FLnI	chr5	152583353	152592911	+	noncoding	AC008571.2	lncRNA	SENSE	ENSG00000286749	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.1n	L1	L1	L1FLnI	chr5	152653467	152663398	-	coding	AC008571.2,LINC01470	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000286749,ENSG00000249484	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.1o	L1	L1	L1FLnI	chr5	152737438	152747468	+	coding	LINC01470	lncRNA	ANTISENSE	ENSG00000249484	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.1p	L1	L1	L1FLnI	chr5	152748177	152758594	+	noncoding	LINC01470	lncRNA	ANTISENSE	ENSG00000249484	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.1q	L1	L1	L1FLnI	chr5	152748177	152757743	+	noncoding	LINC01470	lncRNA	ANTISENSE	ENSG00000249484	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.1r	L1	L1	L1FLnI	chr5	152762162	152772198	-	coding	LINC01470	lncRNA	SENSE	ENSG00000249484	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.1s	L1	L1	L1FLnI	chr5	152784111	152794177	+	noncoding	LINC01470	lncRNA	ANTISENSE	ENSG00000249484	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_5q33.1	L1	L1	L1FLI	chr5	152885442	152893475	-	coding	LINC01470	lncRNA	SENSE	ENSG00000249484	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.1t	L1	L1	L1FLnI	chr5	152913180	152923318	-	coding	LINC01470	lncRNA	SENSE	ENSG00000249484	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.1u	L1	L1	L1FLnI	chr5	153070484	153080508	-	coding	LINC01470	lncRNA	SENSE	ENSG00000249484	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.1v	L1	L1	L1FLnI	chr5	153144468	153154465	+	noncoding	LINC01470	lncRNA	ANTISENSE	ENSG00000249484	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.1w	L1	L1	L1FLnI	chr5	153279060	153289581	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01470	ENSG00000249484	55517	GRIA1	ENSG00000155511	200034	None	None
L1FLnI_5q33.1x	L1	L1	L1FLnI	chr5	153279517	153289597	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01470	ENSG00000249484	55974	GRIA1	ENSG00000155511	200018	None	None
L1FLnI_5q33.1y	L1	L1	L1FLnI	chr5	153290154	153298890	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRIA1	ENSG00000155511	190725	LINC01470	ENSG00000249484	66611	None	None
L1FLnI_5q33.1z	L1	L1	L1FLnI	chr5	153299945	153310073	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GRIA1	ENSG00000155511	179542	LINC01470	ENSG00000249484	76402	None	None
L1FLnI_5q33.2a	L1	L1	L1FLnI	chr5	153321828	153331830	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01470	ENSG00000249484	98285	GRIA1	ENSG00000155511	157785	None	None
L1FLnI_5q33.2b	L1	L1	L1FLnI	chr5	153333713	153342707	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GRIA1	ENSG00000155511	146908	LINC01470	ENSG00000249484	110170	None	None
L1FLnI_5q33.2c	L1	L1	L1FLnI	chr5	153377893	153388036	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01470	ENSG00000249484	154350	GRIA1	ENSG00000155511	101579	None	None
L1FLnI_5q33.2d	L1	L1	L1FLnI	chr5	153719754	153729894	+	coding	GRIA1	protein_coding	SENSE	ENSG00000155511	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.2e	L1	L1	L1FLnI	chr5	155157096	155167243	-	coding	AC010476.2	lncRNA	ANTISENSE	ENSG00000287963	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.2f	L1	L1	L1FLnI	chr5	155164839	155174987	+	coding	AC010476.2	lncRNA	SENSE	ENSG00000287963	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.2g	L1	L1	L1FLnI	chr5	155399370	155408184	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010591.1	ENSG00000271477	1017	AC008725.1	ENSG00000270442	83152	None	None
L1FLnI_5q33.2h	L1	L1	L1FLnI	chr5	155713451	155723591	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP199	ENSG00000200275	121846	AC008725.1	ENSG00000270442	219853	None	None
L1FLnI_5q33.2i	L1	L1	L1FLnI	chr5	156061433	156071466	-	coding	SGCD	protein_coding	ANTISENSE	ENSG00000170624	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.2j	L1	L1	L1FLnI	chr5	156067601	156076614	-	coding	SGCD	protein_coding	ANTISENSE	ENSG00000170624	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.2k	L1	L1	L1FLnI	chr5	156067629	156076614	-	coding	SGCD	protein_coding	ANTISENSE	ENSG00000170624	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.3a	L1	L1	L1FLnI	chr5	156425069	156435110	-	noncoding	SGCD	protein_coding	ANTISENSE	ENSG00000170624	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.3b	L1	L1	L1FLnI	chr5	156575434	156585559	-	coding	SGCD	protein_coding	ANTISENSE	ENSG00000170624	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.3c	L1	L1	L1FLnI	chr5	156604557	156614689	-	coding	SGCD	protein_coding	ANTISENSE	ENSG00000170624	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.3d	L1	L1	L1FLnI	chr5	156729725	156739757	-	noncoding	SGCD,AC025434.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000170624,ENSG00000254163	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.3e	L1	L1	L1FLnI	chr5	156779332	156789442	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SGCD	ENSG00000170624	11544	RNU6-556P	ENSG00000199468	24688	None	None
L1FLnI_5q33.3f	L1	L1	L1FLnI	chr5	156779332	156789439	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SGCD	ENSG00000170624	11544	RNU6-556P	ENSG00000199468	24691	None	None
L1FLnI_5q33.3g	L1	L1	L1FLnI	chr5	156980647	156989377	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TIMD4	ENSG00000145850	17421	HAVCR1	ENSG00000113249	40036	None	None
L1FLnI_5q33.3h	L1	L1	L1FLnI	chr5	156980647	156989375	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TIMD4	ENSG00000145850	17421	HAVCR1	ENSG00000113249	40038	None	None
L1FLnI_5q33.3i	L1	L1	L1FLnI	chr5	157420863	157430966	+	noncoding	AC008676.3,ADAM19,AC008676.2	protein_coding,protein_coding,processed_pseudogene	ANTISENSE,ANTISENSE,SENSE	ENSG00000285868,ENSG00000135074,ENSG00000253155	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.3j	L1	L1	L1FLnI	chr5	157717452	157727628	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008694.1	ENSG00000253798	26574	THG1L	ENSG00000113272	3792	None	None
L1FLnI_5q33.3k	L1	L1	L1FLnI	chr5	158179641	158188242	+	coding	AC025437.4	lncRNA	SENSE	ENSG00000253673	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.3l	L1	L1	L1FLnI	chr5	158330888	158341151	-	noncoding	LINC02227	lncRNA	SENSE	ENSG00000276778	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.3m	L1	L1	L1FLnI	chr5	158438302	158448448	-	noncoding	AC091979.1	lncRNA	ANTISENSE	ENSG00000254350	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q33.3n	L1	L1	L1FLnI	chr5	159136049	159146199	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02202	ENSG00000245812	18571	RNF145	ENSG00000145860	11210	None	None
L1FLnI_5q33.3o	L1	L1	L1FLnI	chr5	159136049	159145323	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02202	ENSG00000245812	18571	RNF145	ENSG00000145860	12086	None	None
L1FLnI_5q34a	L1	L1	L1FLnI	chr5	160577704	160587995	-	noncoding	ATP10B	protein_coding	SENSE	ENSG00000118322	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34b	L1	L1	L1FLnI	chr5	160588928	160599050	+	coding	ATP10B	protein_coding	ANTISENSE	ENSG00000118322	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34c	L1	L1	L1FLnI	chr5	160709110	160719139	-	coding	ATP10B	protein_coding	SENSE	ENSG00000118322	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34d	L1	L1	L1FLnI	chr5	160757137	160767240	+	noncoding	ATP10B	protein_coding	ANTISENSE	ENSG00000118322	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34e	L1	L1	L1FLnI	chr5	160757137	160766837	+	noncoding	ATP10B	protein_coding	ANTISENSE	ENSG00000118322	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34f	L1	L1	L1FLnI	chr5	160809510	160819661	+	coding	ATP10B	protein_coding	ANTISENSE	ENSG00000118322	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34g	L1	L1	L1FLnI	chr5	160870026	160880049	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ATP10B	ENSG00000118322	17812	LINC02159	ENSG00000253417	51729	None	None
L1FLnI_5q34h	L1	L1	L1FLnI	chr5	160889248	160899645	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATP10B	ENSG00000118322	37034	LINC02159	ENSG00000253417	32133	None	None
L1FLnI_5q34i	L1	L1	L1FLnI	chr5	160940578	160950714	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GABRB2	ENSG00000145864	337715	LINC02159	ENSG00000253417	1952	None	None
L1FLnI_5q34j	L1	L1	L1FLnI	chr5	161067859	161077870	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02159	ENSG00000253417	129233	GABRB2	ENSG00000145864	210559	None	None
L1FLnI_5q34k	L1	L1	L1FLnI	chr5	161605552	161615584	-	coding	GABRA6	protein_coding	ANTISENSE	ENSG00000145863	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34l	L1	L1	L1FLnI	chr5	162030427	162040452	-	coding	GABRG2	protein_coding	ANTISENSE	ENSG00000113327	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34m	L1	L1	L1FLnI	chr5	162183980	162194525	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113414.1	ENSG00000254186	229517	GABRG2	ENSG00000113327	21003	chr5:162190199-162190544	None
L1FLnI_5q34n	L1	L1	L1FLnI	chr5	162185490	162194525	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113414.1	ENSG00000254186	229517	GABRG2	ENSG00000113327	22513	chr5:162190199-162190544	None
L1FLnI_5q34o	L1	L1	L1FLnI	chr5	162516419	162525001	-	noncoding	AC113414.1	lncRNA	SENSE	ENSG00000254186	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34p	L1	L1	L1FLnI	chr5	162574536	162584695	+	coding	AC113414.1	lncRNA	ANTISENSE	ENSG00000254186	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34q	L1	L1	L1FLnI	chr5	162621916	162632448	+	noncoding	AC113414.1	lncRNA	ANTISENSE	ENSG00000254186	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34r	L1	L1	L1FLnI	chr5	162690276	162700413	-	coding	AC113414.1	lncRNA	SENSE	ENSG00000254186	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34s	L1	L1	L1FLnI	chr5	162729536	162738049	+	coding	AC113414.1	lncRNA	ANTISENSE	ENSG00000254186	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34t	L1	L1	L1FLnI	chr5	162771511	162780215	-	noncoding	AC113414.1	lncRNA	SENSE	ENSG00000254186	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:162775145-162775525	None
L1FLnI_5q34u	L1	L1	L1FLnI	chr5	162842499	162851937	+	coding	AC113414.1	lncRNA	ANTISENSE	ENSG00000254186	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34v	L1	L1	L1FLnI	chr5	163037085	163046736	+	coding	AC113414.1,MRPL57P6	lncRNA,processed_pseudogene	ANTISENSE,SENSE	ENSG00000254186,ENSG00000249449	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34w	L1	L1	L1FLnI	chr5	163116347	163126478	-	coding	AC113414.1	lncRNA	SENSE	ENSG00000254186	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34x	L1	L1	L1FLnI	chr5	163116358	163126478	-	coding	AC113414.1	lncRNA	SENSE	ENSG00000254186	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34y	L1	L1	L1FLnI	chr5	163142931	163153056	+	noncoding	AC113414.1	lncRNA	ANTISENSE	ENSG00000254186	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34z	L1	L1	L1FLnI	chr5	163161558	163171700	+	noncoding	AC113414.1	lncRNA	ANTISENSE	ENSG00000254186	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34aa	L1	L1	L1FLnI	chr5	163208685	163218627	+	coding	AC113414.1	lncRNA	ANTISENSE	ENSG00000254186	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34ba	L1	L1	L1FLnI	chr5	163929027	163938015	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LSM1P2	ENSG00000271679	41200	AC008662.1	ENSG00000253331	181083	None	None
L1FLnI_5q34ca	L1	L1	L1FLnI	chr5	164689692	164699414	+	noncoding	AC109466.1	lncRNA	SENSE	ENSG00000241956	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34da	L1	L1	L1FLnI	chr5	164928165	164938398	-	coding	AC109466.1,RNU6-209P	lncRNA,snRNA	ANTISENSE,SENSE	ENSG00000241956,ENSG00000206845	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34ea	L1	L1	L1FLnI	chr5	165041223	165050053	-	noncoding	AC109466.1	lncRNA	ANTISENSE	ENSG00000241956	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34fa	L1	L1	L1FLnI	chr5	165384813	165395209	+	noncoding	AC008415.1	lncRNA	SENSE	ENSG00000253693	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr5:165393906-165394099	None
L1FLnI_5q34ga	L1	L1	L1FLnI	chr5	165384813	165393421	+	noncoding	AC008415.1	lncRNA	SENSE	ENSG00000253693	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34ha	L1	L1	L1FLnI	chr5	165409848	165419174	+	coding	AC008415.1	lncRNA	SENSE	ENSG00000253693	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34ia	L1	L1	L1FLnI	chr5	165463540	165472112	+	noncoding	AC008415.1	lncRNA	SENSE	ENSG00000253693	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr5:165464819-165464861
L1FLnI_5q34ja	L1	L1	L1FLnI	chr5	165686936	165697367	-	noncoding	AC008415.1	lncRNA	ANTISENSE	ENSG00000253693	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34ka	L1	L1	L1FLnI	chr5	165967932	165977614	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P20	ENSG00000254252	50953	AC008489.1	ENSG00000253946	62324	None	None
L1FLnI_5q34la	L1	L1	L1FLnI	chr5	166140693	166149192	-	coding	AC114321.1	lncRNA	ANTISENSE	ENSG00000254171	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34ma	L1	L1	L1FLnI	chr5	166444037	166454488	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01947	ENSG00000254130	450734	AC026403.1	ENSG00000229119	61438	None	None
L1FLnI_5q34na	L1	L1	L1FLnI	chr5	166966283	166976315	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC091819.2	ENSG00000253713	140003	LINC01947	ENSG00000254130	39913	None	None
L1FLnI_5q34oa	L1	L1	L1FLnI	chr5	167222559	167231519	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TENM2	ENSG00000145934	53280	AC091819.1	ENSG00000253469	54158	None	None
L1FLnI_5q34pa	L1	L1	L1FLnI	chr5	167953968	167962685	-	noncoding	TENM2	protein_coding	ANTISENSE	ENSG00000145934	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34qa	L1	L1	L1FLnI	chr5	168076930	168087078	-	coding	TENM2,AC011369.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000145934,ENSG00000253925	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q34ra	L1	L1	L1FLnI	chr5	168627205	168637533	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL10P9	ENSG00000233913	10209	AC011365.3	ENSG00000254192	16980	chr5:168628368-168628389	None
L1FLnI_5q34sa	L1	L1	L1FLnI	chr5	168725448	168734084	+	noncoding	SLIT3	protein_coding	ANTISENSE	ENSG00000184347	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q35.1a	L1	L1	L1FLnI	chr5	169474765	169485293	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-477P	ENSG00000206614	67156	SLIT3	ENSG00000184347	173636	None	None
L1FLnI_5q35.1b	L1	L1	L1FLnI	chr5	169816146	169826275	+	coding	DOCK2	protein_coding	SENSE	ENSG00000134516	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q35.1c	L1	L1	L1FLnI	chr5	170239278	170249295	-	coding	C5orf58,LCP2	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000234511,ENSG00000043462	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q35.1d	L1	L1	L1FLnI	chr5	170897738	170907030	-	noncoding	RANBP17,AC008514.2	protein_coding,processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000204764,ENSG00000253966	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q35.1e	L1	L1	L1FLnI	chr5	170929914	170939908	-	noncoding	RANBP17	protein_coding	ANTISENSE	ENSG00000204764	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q35.1f	L1	L1	L1FLnI	chr5	170929929	170939908	-	noncoding	RANBP17	protein_coding	ANTISENSE	ENSG00000204764	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q35.1g	L1	L1	L1FLnI	chr5	171016274	171026737	-	coding	RANBP17	protein_coding	ANTISENSE	ENSG00000204764	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q35.1h	L1	L1	L1FLnI	chr5	171057665	171067807	-	coding	RANBP17	protein_coding	ANTISENSE	ENSG00000204764	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q35.1i	L1	L1	L1FLnI	chr5	171083465	171093473	-	coding	RANBP17	protein_coding	ANTISENSE	ENSG00000204764	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q35.1j	L1	L1	L1FLnI	chr5	171097146	171107523	-	coding	RANBP17	protein_coding	ANTISENSE	ENSG00000204764	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q35.1k	L1	L1	L1FLnI	chr5	171097156	171107523	-	coding	RANBP17	protein_coding	ANTISENSE	ENSG00000204764	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q35.1l	L1	L1	L1FLnI	chr5	171214390	171223859	-	noncoding	RANBP17	protein_coding	ANTISENSE	ENSG00000204764	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_5q35.2	L1	L1	L1FLI	chr5	173401784	173409831	-	coding	AC016573.1	lncRNA	ANTISENSE	ENSG00000253968	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q35.2a	L1	L1	L1FLnI	chr5	174030550	174039459	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL12P22	ENSG00000253109	292	C5orf47	ENSG00000185056	24410	None	None
L1FLnI_5q35.2b	L1	L1	L1FLnI	chr5	174462406	174472553	+	noncoding	LINC01411	lncRNA	SENSE	ENSG00000249306	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q35.2c	L1	L1	L1FLnI	chr5	174858375	174868792	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01951	ENSG00000204754	50290	AC113346.2	ENSG00000251670	7650	None	None
L1FLnI_5q35.2d	L1	L1	L1FLnI	chr5	174900309	174910317	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113346.2	ENSG00000251670	49584	LINC01951	ENSG00000204754	8765	None	chr5:174902333-174902338
L1FLnI_5q35.2e	L1	L1	L1FLnI	chr5	174964861	174973543	-	noncoding	LINC01951	lncRNA	SENSE	ENSG00000204754	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q35.2f	L1	L1	L1FLnI	chr5	175290298	175299740	+	coding	ARL2BPP6	processed_pseudogene	SENSE	ENSG00000248355	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q35.2g	L1	L1	L1FLnI	chr5	175394271	175404301	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARL2BPP6	ENSG00000248355	103019	DRD1	ENSG00000184845	35735	None	None
L1FLnI_5q35.2h	L1	L1	L1FLnI	chr5	176048259	176058381	+	coding	AC139491.1	lncRNA	ANTISENSE	ENSG00000248469	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q35.2i	L1	L1	L1FLnI	chr5	176077679	176087818	-	coding	FAM153B,AC139491.7	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000182230,ENSG00000285476	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q35.2j	L1	L1	L1FLnI	chr5	176275948	176286084	-	coding	SIMC1	protein_coding	ANTISENSE	ENSG00000170085	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q35.2k	L1	L1	L1FLnI	chr5	176279087	176288131	+	coding	SIMC1	protein_coding	SENSE	ENSG00000170085	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q35.3a	L1	L1	L1FLnI	chr5	177750352	177760469	+	coding	FAM153A	protein_coding	ANTISENSE	ENSG00000170074	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_5q35.3	L1	L1	L1FLI	chr5	177771245	177779289	+	coding	FAM153A	protein_coding	ANTISENSE	ENSG00000170074	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q35.3b	L1	L1	L1FLnI	chr5	177785700	177795816	-	coding	AC140125.2	lncRNA	ANTISENSE	ENSG00000249109	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q35.3c	L1	L1	L1FLnI	chr5	178023308	178033448	-	coding	FAM153CP	lncRNA	ANTISENSE	ENSG00000204677	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q35.3d	L1	L1	L1FLnI	chr5	179097571	179107579	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF354C	ENSG00000177932	13594	ADAMTS2	ENSG00000087116	3274	None	None
L1FLnI_5q35.3e	L1	L1	L1FLnI	chr5	180756178	180766312	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MGAT1	ENSG00000131446	18470	OR2Y1	ENSG00000174339	16079	None	None
L1FLnI_5q35.3f	L1	L1	L1FLnI	chr5	180879908	180890052	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BTNL8	ENSG00000113303	9025	ZFP62	ENSG00000196670	18623	None	None
L1FLnI_5q35.3g	L1	L1	L1FLnI	chr5	180885907	180896346	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZFP62	ENSG00000196670	24622	BTNL8	ENSG00000113303	2731	None	None
L1FLnI_5q35.3h	L1	L1	L1FLnI	chr5	180902023	180912037	-	coding	BTNL8,AC022413.1	protein_coding,misc_RNA	ANTISENSE,ANTISENSE	ENSG00000113303,ENSG00000222852	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr5:180909566-180909582,chr5:180911093-180911114
L1FLnI_5q35.3i	L1	L1	L1FLnI	chr5	180922525	180932855	+	coding	BTNL8	protein_coding	SENSE	ENSG00000113303	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q35.3j	L1	L1	L1FLnI	chr5	181004253	181012866	+	noncoding	BTNL3,RNU6-1036P	protein_coding,snRNA	SENSE,SENSE	ENSG00000168903,ENSG00000206686	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_5q35.3k	L1	L1	L1FLnI	chr5	181371109	181381529	-	noncoding	WBP1LP4	processed_pseudogene	SENSE	ENSG00000251035	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p25.3a	L1	L1	L1FLnI	chr6	92616	103039	+	noncoding	WBP1LP12	processed_pseudogene	SENSE	ENSG00000271530	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p25.3b	L1	L1	L1FLnI	chr6	1428116	1438250	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL352P	ENSG00000243439	69072	FOXF2	ENSG00000137273	32513	None	None
L1FLnI_6p25.3c	L1	L1	L1FLnI	chr6	2061469	2070931	+	coding	GMDS	protein_coding	ANTISENSE	ENSG00000112699	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p25.3d	L1	L1	L1FLnI	chr6	2074777	2084288	-	noncoding	GMDS	protein_coding	SENSE	ENSG00000112699	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p25.3e	L1	L1	L1FLnI	chr6	2282746	2293195	+	noncoding	GMDS-DT	lncRNA	SENSE	ENSG00000250903	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_6p25.2	L1	L1	L1FLI	chr6	2416759	2424805	-	coding	GMDS-DT	lncRNA	ANTISENSE	ENSG00000250903	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p25.2a	L1	L1	L1FLnI	chr6	2583006	2593610	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02521	ENSG00000228718	23534	AL359852.1	ENSG00000280423	18863	None	None
L1FLnI_6p25.2b	L1	L1	L1FLnI	chr6	2584822	2593610	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02521	ENSG00000228718	23534	AL359852.1	ENSG00000280423	20679	None	None
L1FLnI_6p25.2c	L1	L1	L1FLnI	chr6	2873372	2883353	+	noncoding	SERPINB9P1	lncRNA	ANTISENSE	ENSG00000230438	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr6:2874631-2874910,chr6:2874987-2875417,chr6:2877535-2877853	chr6:2876032-2876047,chr6:2876499-2876518,chr6:2876888-2876910,chr6:2876030-2876057,chr6:2876383-2876414,chr6:2876416-2876444,chr6:2876525-2876561,chr6:2876616-2876629,chr6:2876727-2876763,chr6:2881595-2881633
L1FLnI_6p25.2d	L1	L1	L1FLnI	chr6	3671689	3681810	-	noncoding	AL033523.1	lncRNA	SENSE	ENSG00000228793	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p25.2e	L1	L1	L1FLnI	chr6	4198014	4208133	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL162718.1	ENSG00000285424	96809	AL136309.1	ENSG00000216307	8208	None	None
L1FLnI_6p25.1a	L1	L1	L1FLnI	chr6	4225393	4235610	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136309.1	ENSG00000216307	35587	AL162718.1	ENSG00000285424	69332	None	chr6:4228523-4228528
L1FLnI_6p25.1b	L1	L1	L1FLnI	chr6	4328256	4338259	-	coding	AL162718.1	lncRNA	SENSE	ENSG00000285424	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr6:4337376-4337382
L1FLnI_6p25.1c	L1	L1	L1FLnI	chr6	4401855	4411605	+	noncoding	AL162718.1	lncRNA	ANTISENSE	ENSG00000285424	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p25.1d	L1	L1	L1FLnI	chr6	4830674	4839730	-	coding	CDYL	protein_coding	ANTISENSE	ENSG00000153046	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p25.1e	L1	L1	L1FLnI	chr6	4838476	4847881	-	noncoding	CDYL	protein_coding	ANTISENSE	ENSG00000153046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p25.1f	L1	L1	L1FLnI	chr6	5685702	5695836	-	coding	FARS2,AL022097.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000145982,ENSG00000270174	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p25.1g	L1	L1	L1FLnI	chr6	5885661	5895426	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL221P	ENSG00000239472	23138	AL136307.1	ENSG00000233064	15441	chr6:5892428-5892729	None
L1FLnI_6p25.1h	L1	L1	L1FLnI	chr6	5911451	5921811	-	coding	RN7SL221P	misc_RNA	SENSE	ENSG00000239472	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p25.1i	L1	L1	L1FLnI	chr6	6107126	6116010	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	F13A1	ENSG00000124491	28074	NRN1	ENSG00000124785	99521	None	None
L1FLnI_6p25.1j	L1	L1	L1FLnI	chr6	6107126	6115908	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	F13A1	ENSG00000124491	28176	NRN1	ENSG00000124785	99521	None	None
L1FLnI_6p25.1k	L1	L1	L1FLnI	chr6	6184631	6194751	-	coding	F13A1	protein_coding	SENSE	ENSG00000124491	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p25.1l	L1	L1	L1FLnI	chr6	6208166	6218190	+	noncoding	F13A1	protein_coding	ANTISENSE	ENSG00000124491	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p25.1m	L1	L1	L1FLnI	chr6	6226088	6236818	+	noncoding	F13A1	protein_coding	ANTISENSE	ENSG00000124491	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p25.1n	L1	L1	L1FLnI	chr6	6294245	6304268	-	coding	F13A1	protein_coding	SENSE	ENSG00000124491	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p25.1o	L1	L1	L1FLnI	chr6	6367804	6376716	+	noncoding	LY86-AS1	lncRNA	ANTISENSE	ENSG00000216863	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p25.1p	L1	L1	L1FLnI	chr6	6664656	6673490	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LY86	ENSG00000112799	9673	AL031123.2	ENSG00000261211	6819	None	None
L1FLnI_6p24.3a	L1	L1	L1FLnI	chr6	7922206	7932330	+	coding	BLOC1S5-TXNDC5	protein_coding	ANTISENSE	ENSG00000259040	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p24.3b	L1	L1	L1FLnI	chr6	7942697	7952799	-	coding	BLOC1S5-TXNDC5	protein_coding	SENSE	ENSG00000259040	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p24.3c	L1	L1	L1FLnI	chr6	8596355	8605564	-	noncoding	AL355499.2,HULC	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000285216,ENSG00000285219	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p24.3d	L1	L1	L1FLnI	chr6	8596842	8605564	-	noncoding	AL355499.2,HULC	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000285216,ENSG00000285219	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p24.3e	L1	L1	L1FLnI	chr6	8769973	8780012	-	coding	HULC	lncRNA	ANTISENSE	ENSG00000285219	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p24.3f	L1	L1	L1FLnI	chr6	8769999	8780012	-	coding	HULC	lncRNA	ANTISENSE	ENSG00000285219	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p24.3g	L1	L1	L1FLnI	chr6	9351139	9360784	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HULC	ENSG00000285219	57006	OFCC1	ENSG00000181355	235326	None	None
L1FLnI_6p24.3h	L1	L1	L1FLnI	chr6	9440249	9450376	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HULC	ENSG00000285219	146116	OFCC1	ENSG00000181355	145734	chr6:9443347-9443592	chr6:9441631-9441636
L1FLnI_6p24.3i	L1	L1	L1FLnI	chr6	9807252	9817277	+	coding	OFCC1	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000181355	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p24.3j	L1	L1	L1FLnI	chr6	9878825	9888948	+	noncoding	OFCC1	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000181355	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:9882291-9882304	None
L1FLnI_6p24.3k	L1	L1	L1FLnI	chr6	9965546	9975549	-	coding	OFCC1	transcribed_unitary_pseudogene	SENSE	ENSG00000181355	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p24.2a	L1	L1	L1FLnI	chr6	11295372	11305463	+	noncoding	NEDD9,AL022098.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000111859,ENSG00000287920	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p24.2b	L1	L1	L1FLnI	chr6	11448311	11458454	+	noncoding	AL445430.2,AL445430.1	lncRNA,lncRNA	SENSE,SENSE	ENSG00000242753,ENSG00000233656	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p24.1a	L1	L1	L1FLnI	chr6	11833396	11843846	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL022724.2	ENSG00000234427	22148	AMD1P4	ENSG00000215124	17780	chr6:11834382-11834583	None
L1FLnI_6p24.1b	L1	L1	L1FLnI	chr6	12135864	12146031	+	noncoding	HIVEP1	protein_coding	SENSE	ENSG00000095951	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr6:12135889-12135910
L1FLnI_6p24.1c	L1	L1	L1FLnI	chr6	12545694	12555847	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL15P3	ENSG00000212802	30970	LINC02530	ENSG00000234015	27068	chr6:12545979-12546211	None
L1FLnI_6p23	L1	L1	L1FLnI	chr6	14476494	14486639	+	coding	AL009177.1	lncRNA	SENSE	ENSG00000286277	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p22.3a	L1	L1	L1FLnI	chr6	15637733	15647821	+	noncoding	DTNBP1	protein_coding	ANTISENSE	ENSG00000047579	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p22.3b	L1	L1	L1FLnI	chr6	15637733	15646758	+	noncoding	DTNBP1	protein_coding	ANTISENSE	ENSG00000047579	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p22.3c	L1	L1	L1FLnI	chr6	16010036	16020061	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL365265.1	ENSG00000274212	21320	LINC02543	ENSG00000232947	10239	None	None
L1FLnI_6p22.3d	L1	L1	L1FLnI	chr6	18224891	18234861	+	coding	DEK	protein_coding	ANTISENSE	ENSG00000124795	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr6:18225292-18225303
L1FLnI_6p22.3e	L1	L1	L1FLnI	chr6	18224891	18234779	+	coding	DEK	protein_coding	ANTISENSE	ENSG00000124795	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr6:18225292-18225303
L1FLnI_6p22.3f	L1	L1	L1FLnI	chr6	18353284	18362833	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DDX18P3	ENSG00000217414	584	RNU6-263P	ENSG00000200681	46205	chr6:18353337-18353719	None
L1FLnI_6p22.3g	L1	L1	L1FLnI	chr6	18652605	18663001	+	noncoding	MIR548A1HG	lncRNA	SENSE	ENSG00000283408	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p22.3h	L1	L1	L1FLnI	chr6	18922436	18931583	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589647.1	ENSG00000217379	212112	MIR548A1HG	ENSG00000283408	248435	None	None
L1FLnI_6p22.3i	L1	L1	L1FLnI	chr6	19217330	19227480	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL589647.1	ENSG00000217379	73170	AL357052.1	ENSG00000231662	62839	None	None
L1FLnI_6p22.3j	L1	L1	L1FLnI	chr6	19235127	19245119	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589647.1	ENSG00000217379	90967	AL357052.1	ENSG00000231662	45200	None	None
L1FLnI_6p22.3k	L1	L1	L1FLnI	chr6	19243450	19253592	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589647.1	ENSG00000217379	99290	AL357052.1	ENSG00000231662	36727	None	None
L1FLnI_6p22.3l	L1	L1	L1FLnI	chr6	19478243	19488390	+	coding	LNC-LBCS	lncRNA	ANTISENSE	ENSG00000228412	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p22.3m	L1	L1	L1FLnI	chr6	19491644	19501751	+	coding	LNC-LBCS	lncRNA	ANTISENSE	ENSG00000228412	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p22.3n	L1	L1	L1FLnI	chr6	19491644	19501739	+	coding	LNC-LBCS	lncRNA	ANTISENSE	ENSG00000228412	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_6p22.3	L1	L1	L1ORF2	chr6	19763886	19771932	+	coding	LNC-LBCS	lncRNA	ANTISENSE	ENSG00000228412	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p22.3o	L1	L1	L1FLnI	chr6	19911074	19919936	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL022726.1	ENSG00000287138	16860	AL008627.1	ENSG00000229700	122519	None	None
L1FLnI_6p22.3p	L1	L1	L1FLnI	chr6	20071110	20080305	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL008627.1	ENSG00000229700	28170	MBOAT1	ENSG00000172197	19379	None	None
L1FLnI_6p22.3q	L1	L1	L1FLnI	chr6	22165855	22175976	-	coding	CASC15	lncRNA	ANTISENSE	ENSG00000272168	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p22.3r	L1	L1	L1FLnI	chr6	22174342	22184374	-	coding	CASC15	lncRNA	ANTISENSE	ENSG00000272168	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p22.3s	L1	L1	L1FLnI	chr6	22383528	22393896	-	noncoding	CASC15	lncRNA	ANTISENSE	ENSG00000272168	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p22.3t	L1	L1	L1FLnI	chr6	22459241	22468054	-	coding	CASC15	lncRNA	ANTISENSE	ENSG00000272168	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p22.3u	L1	L1	L1FLnI	chr6	22476207	22485766	+	noncoding	CASC15	lncRNA	SENSE	ENSG00000272168	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p22.3v	L1	L1	L1FLnI	chr6	22987976	22997641	-	noncoding	AL035401.1	lncRNA	SENSE	ENSG00000233358	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:22993296-22993544	None
L1FLnI_6p22.3w	L1	L1	L1FLnI	chr6	23253788	23263919	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL139231.1	ENSG00000235743	73792	RNU6-1060P	ENSG00000207394	128701	None	None
L1FLnI_6p22.3x	L1	L1	L1FLnI	chr6	23358490	23368617	-	coding	AL139231.1	lncRNA	ANTISENSE	ENSG00000235743	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p22.3y	L1	L1	L1FLnI	chr6	23800549	23810575	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL133270.1	ENSG00000219453	150775	AL139093.1	ENSG00000278128	43564	None	None
L1FLnI_6p22.3z	L1	L1	L1FLnI	chr6	24036753	24047058	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NRSN1	ENSG00000152954	79128	HNRNPA1P58	ENSG00000219582	34320	None	None
L1FLnI_6p22.3aa	L1	L1	L1FLnI	chr6	24079348	24089501	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA1P58	ENSG00000219582	76915	NRSN1	ENSG00000152954	36685	None	None
L1FLnI_6p22.3ba	L1	L1	L1FLnI	chr6	24194713	24205128	+	noncoding	DCDC2	protein_coding	ANTISENSE	ENSG00000146038	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_6p22.3	L1	L1	L1FLI	chr6	24810664	24818709	-	coding	RIPOR2	protein_coding	SENSE	ENSG00000111913	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p22.3ca	L1	L1	L1FLnI	chr6	25154699	25164809	+	coding	CMAHP	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000168405	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:25154823-25154844	chr6:25154823-25154826
L1FLnI_6p22.2a	L1	L1	L1FLnI	chr6	25203455	25213872	+	coding	CMAHP	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000168405	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p22.2b	L1	L1	L1FLnI	chr6	27004903	27015070	+	coding	LINC00240	lncRNA	SENSE	ENSG00000224843	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p22.1a	L1	L1	L1FLnI	chr6	28017259	28027412	+	coding	ZSCAN16-AS1	lncRNA	ANTISENSE	ENSG00000269293	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p22.1b	L1	L1	L1FLnI	chr6	28305309	28315776	-	noncoding	AL021997.2	processed_pseudogene	SENSE	ENSG00000273712	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr6:28313111-28313168	None
L1FLnI_6p22.1c	L1	L1	L1FLnI	chr6	28617745	28627890	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZBED9	ENSG00000232040	1533	AL121932.1	ENSG00000271440	5491	None	None
L1FLnI_6p22.1d	L1	L1	L1FLnI	chr6	28846719	28855423	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL662890.1	ENSG00000225173	7713	LINC01623	ENSG00000225595	4202	chr6:28854790-28854977	None
L1FLnI_6p22.1e	L1	L1	L1FLnI	chr6	29238494	29248053	-	noncoding	AL672167.1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000197171	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p22.1f	L1	L1	L1FLnI	chr6	29269950	29280097	+	coding	AL672167.1	transcribed_unprocessed_pseudogene	SENSE	ENSG00000197171	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p22.1g	L1	L1	L1FLnI	chr6	29356017	29365016	+	coding	OR5V1	protein_coding	ANTISENSE	ENSG00000243729	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p22.1h	L1	L1	L1FLnI	chr6	29405622	29415005	+	noncoding	OR5V1,OR12D1	protein_coding,polymorphic_pseudogene	ANTISENSE,SENSE	ENSG00000243729,ENSG00000251608	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p22.1i	L1	L1	L1FLnI	chr6	29776289	29786323	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645939.4	ENSG00000270896	12897	HLA-V	ENSG00000181126	4631	None	None
L1FLnI_6p22.1j	L1	L1	L1FLnI	chr6	30080090	30090125	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TRIM31	ENSG00000204616	12772	RNF39	ENSG00000204618	4203	None	None
L1FLnI_6p22.1k	L1	L1	L1FLnI	chr6	30080101	30090125	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TRIM31	ENSG00000204616	12772	RNF39	ENSG00000204618	4214	None	None
L1FLnI_6p22.1l	L1	L1	L1FLnI	chr6	30244470	30253870	+	coding	HCG17	lncRNA	ANTISENSE	ENSG00000270604	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p22.1m	L1	L1	L1FLnI	chr6	30426782	30436930	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MICC	ENSG00000226577	7463	AL662873.1	ENSG00000286301	14209	None	None
L1FLnI_6p21.33	L1	L1	L1FLnI	chr6	31254353	31264132	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HLA-C	ENSG00000204525	4617	AL662844.2	ENSG00000255899	29295	None	None
L1FLnI_6p21.32a	L1	L1	L1FLnI	chr6	32256612	32265254	-	noncoding	TSBP1-AS1	lncRNA	ANTISENSE	ENSG00000225914	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p21.32b	L1	L1	L1FLnI	chr6	32802638	32811895	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HLA-DOB	ENSG00000241106	868	HLA-DQB2	ENSG00000232629	39106	None	None
L1FLnI_6p21.31	L1	L1	L1FLnI	chr6	36079546	36088940	+	noncoding	MAPK14	protein_coding	SENSE	ENSG00000112062	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p21.2a	L1	L1	L1FLnI	chr6	39451059	39461034	+	coding	KIF6	protein_coding	ANTISENSE	ENSG00000164627	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p21.2b	L1	L1	L1FLnI	chr6	39497662	39507035	+	noncoding	KIF6	protein_coding	ANTISENSE	ENSG00000164627	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p21.2c	L1	L1	L1FLnI	chr6	39529520	39539727	+	coding	KIF6	protein_coding	ANTISENSE	ENSG00000164627	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p21.2d	L1	L1	L1FLnI	chr6	39732907	39743067	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	KIF6	ENSG00000164627	7499	DAAM2	ENSG00000146122	49231	None	None
L1FLnI_6p21.2e	L1	L1	L1FLnI	chr6	40201135	40210690	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL139275.2	ENSG00000227131	60876	TUBBP9	ENSG00000220586	200608	None	None
L1FLnI_6p21.2f	L1	L1	L1FLnI	chr6	40230695	40242196	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TUBBP9	ENSG00000220586	230168	AL139275.2	ENSG00000227131	29370	None	None
L1FLnI_6p21.1a	L1	L1	L1FLnI	chr6	40972780	40983477	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UNC5CL	ENSG00000124602	43418	AL583854.1	ENSG00000237947	257417	None	None
L1FLnI_6p21.1b	L1	L1	L1FLnI	chr6	44516002	44526905	-	noncoding	AL136140.1	lncRNA	ANTISENSE	ENSG00000237530	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr6:44523036-44523250	None
L1FLnI_6p21.1c	L1	L1	L1FLnI	chr6	44583674	44593813	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL133334.1	ENSG00000286417	134108	AL136140.2	ENSG00000279076	30393	None	None
L1FLnI_6p21.1d	L1	L1	L1FLnI	chr6	44743964	44754085	+	coding	AL133334.1	lncRNA	SENSE	ENSG00000286417	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p21.1e	L1	L1	L1FLnI	chr6	44753981	44764001	-	coding	AL133334.1	lncRNA	ANTISENSE	ENSG00000286417	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_6p21.1	L1	L1	L1FLI	chr6	44869634	44877680	+	coding	SUPT3H	protein_coding	ANTISENSE	ENSG00000196284	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:44869724-44869974	None
L1FLnI_6p21.1f	L1	L1	L1FLnI	chr6	44881131	44891266	+	coding	SUPT3H	protein_coding	ANTISENSE	ENSG00000196284	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p21.1g	L1	L1	L1FLnI	chr6	44896545	44906675	+	coding	SUPT3H,NUDT19P4	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000196284,ENSG00000270900	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p21.1h	L1	L1	L1FLnI	chr6	45058949	45068976	+	coding	SUPT3H	protein_coding	ANTISENSE	ENSG00000196284	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p21.1i	L1	L1	L1FLnI	chr6	45172563	45182379	+	coding	SUPT3H	protein_coding	ANTISENSE	ENSG00000196284	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p21.1j	L1	L1	L1FLnI	chr6	45172563	45182402	+	coding	SUPT3H	protein_coding	ANTISENSE	ENSG00000196284	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p21.1k	L1	L1	L1FLnI	chr6	45277609	45287753	+	coding	SUPT3H	protein_coding	ANTISENSE	ENSG00000196284	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p21.1l	L1	L1	L1FLnI	chr6	45287578	45296957	+	noncoding	SUPT3H	protein_coding	ANTISENSE	ENSG00000196284	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p21.1m	L1	L1	L1FLnI	chr6	45668877	45678901	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CLIC5	ENSG00000112782	201926	RUNX2	ENSG00000124813	4528	chr6:45677344-45677865	None
L1FLnI_6p21.1n	L1	L1	L1FLnI	chr6	46115959	46126080	+	noncoding	AL035701.1	lncRNA	ANTISENSE	ENSG00000231769	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.3a	L1	L1	L1FLnI	chr6	46224290	46234392	-	noncoding	RCAN2	protein_coding	SENSE	ENSG00000172348	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.3b	L1	L1	L1FLnI	chr6	46440981	46451568	+	coding	RCAN2	protein_coding	ANTISENSE	ENSG00000172348	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.3c	L1	L1	L1FLnI	chr6	46572830	46581625	+	coding	AL035670.1,CYP39A1	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000236466,ENSG00000146233	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.3d	L1	L1	L1FLnI	chr6	46809098	46819058	-	noncoding	MEP1A	protein_coding	ANTISENSE	ENSG00000112818	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr6:46816659-46816858	None
L1FLnI_6p12.3e	L1	L1	L1FLnI	chr6	47208129	47216720	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADGRF1	ENSG00000153292	165779	TNFRSF21	ENSG00000146072	14812	None	None
L1FLnI_6p12.3f	L1	L1	L1FLnI	chr6	47266604	47276169	+	coding	TNFRSF21	protein_coding	ANTISENSE	ENSG00000146072	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:47275726-47275865	None
L1FLnI_6p12.3g	L1	L1	L1FLnI	chr6	47324339	47334490	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TNFRSF21	ENSG00000146072	14434	B3GNTL1P2	ENSG00000271328	34453	None	None
L1FLnI_6p12.3h	L1	L1	L1FLnI	chr6	47543055	47551692	+	noncoding	CD2AP	protein_coding	SENSE	ENSG00000198087	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.3i	L1	L1	L1FLnI	chr6	47635149	47644666	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ADGRF2	ENSG00000164393	11770	CD2AP	ENSG00000198087	7886	None	None
L1FLnI_6p12.3j	L1	L1	L1FLnI	chr6	48098977	48109115	+	coding	AL353138.1	lncRNA	ANTISENSE	ENSG00000286811	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.3k	L1	L1	L1FLnI	chr6	48229477	48240401	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBMXP1	ENSG00000216835	14683	FO393412.1	ENSG00000278736	461090	None	None
L1FLnI_6p12.3l	L1	L1	L1FLnI	chr6	48281302	48292713	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FO393412.1	ENSG00000278736	408778	RBMXP1	ENSG00000216835	66508	None	None
L1FLnI_6p12.3m	L1	L1	L1FLnI	chr6	48352396	48361186	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBMXP1	ENSG00000216835	137602	FO393412.1	ENSG00000278736	340305	None	None
L1ORF2_6p12.3	L1	L1	L1ORF2	chr6	48362090	48370134	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RBMXP1	ENSG00000216835	147296	FO393412.1	ENSG00000278736	331357	None	None
L1FLnI_6p12.3n	L1	L1	L1FLnI	chr6	48690362	48699190	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RBMXP1	ENSG00000216835	475568	FO393412.1	ENSG00000278736	2301	None	None
L1FLnI_6p12.3o	L1	L1	L1FLnI	chr6	48733850	48743877	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FO393412.1	ENSG00000278736	31978	AL391538.1	ENSG00000287137	10772	None	None
L1FLnI_6p12.3p	L1	L1	L1FLnI	chr6	49054730	49064298	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL022099.1	ENSG00000271162	101949	AL589994.1	ENSG00000218337	13414	None	None
L1FLnI_6p12.3q	L1	L1	L1FLnI	chr6	49144522	49154909	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FO393413.1	ENSG00000217631	118691	AL589994.2	ENSG00000274867	28407	None	None
L1FLnI_6p12.3r	L1	L1	L1FLnI	chr6	49213899	49222819	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589994.2	ENSG00000274867	97784	FO393413.1	ENSG00000217631	50781	None	None
L1FLnI_6p12.3s	L1	L1	L1FLnI	chr6	49273012	49282418	+	coding	FO393413.1	processed_pseudogene	SENSE	ENSG00000217631	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.3t	L1	L1	L1FLnI	chr6	49346777	49356215	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-65P	ENSG00000252457	1916	EEF1A1P42	ENSG00000277043	1970	None	None
L1FLnI_6p12.3u	L1	L1	L1FLnI	chr6	49383382	49393406	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	EEF1A1P42	ENSG00000277043	22962	MMUT	ENSG00000146085	36954	None	None
L1FLnI_6p12.3v	L1	L1	L1FLnI	chr6	49595058	49605173	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CYP2AC1P	ENSG00000216998	14892	RHAG	ENSG00000112077	2	None	None
L1FLnI_6p12.3w	L1	L1	L1FLnI	chr6	49790991	49801011	-	coding	AL121974.1	lncRNA	ANTISENSE	ENSG00000235122	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.3x	L1	L1	L1FLnI	chr6	49791004	49801011	-	coding	AL121974.1	lncRNA	ANTISENSE	ENSG00000235122	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.3y	L1	L1	L1FLnI	chr6	49888087	49898210	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CRISP1	ENSG00000124812	10991	DEFB133	ENSG00000214643	47811	chr6:49891054-49891330	None
L1FLnI_6p12.3z	L1	L1	L1FLnI	chr6	50026782	50036834	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DEFB110	ENSG00000203970	4788	DEFB112	ENSG00000180872	5310	chr6:50031080-50031096	None
L1FLnI_6p12.3aa	L1	L1	L1FLnI	chr6	50222806	50232965	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL132799.1	ENSG00000286405	178879	AL138826.1	ENSG00000226733	41799	None	None
L1FLnI_6p12.3ba	L1	L1	L1FLnI	chr6	50340229	50350371	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138826.1	ENSG00000226733	159222	AL132799.1	ENSG00000286405	61473	None	None
L1FLnI_6p12.3ca	L1	L1	L1FLnI	chr6	50474039	50484141	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL132799.1	ENSG00000286405	58164	AL360175.1	ENSG00000233470	29894	None	None
L1FLnI_6p12.3da	L1	L1	L1FLnI	chr6	50495464	50504828	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL132799.1	ENSG00000286405	79589	AL360175.1	ENSG00000233470	9207	None	None
L1FLnI_6p12.3ea	L1	L1	L1FLnI	chr6	50616366	50626503	+	coding	AL135908.1	lncRNA	ANTISENSE	ENSG00000230472	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.3fa	L1	L1	L1FLnI	chr6	50643524	50652288	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TFAP2D	ENSG00000008197	61540	AL135908.1	ENSG00000230472	6319	None	None
L1FLnI_6p12.3ga	L1	L1	L1FLnI	chr6	50915350	50925483	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL158050.2	ENSG00000270306	459799	FTH1P5	ENSG00000230204	2094	None	None
L1FLnI_6p12.3ha	L1	L1	L1FLnI	chr6	51030896	51041005	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158050.2	ENSG00000270306	344277	FTH1P5	ENSG00000230204	117640	None	None
L1FLnI_6p12.3ia	L1	L1	L1FLnI	chr6	51072050	51082001	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL158050.2	ENSG00000270306	303281	FTH1P5	ENSG00000230204	158794	None	None
L1FLnI_6p12.3ja	L1	L1	L1FLnI	chr6	51072052	51082001	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL158050.2	ENSG00000270306	303281	FTH1P5	ENSG00000230204	158796	None	None
L1FLnI_6p12.3ka	L1	L1	L1FLnI	chr6	51117937	51128084	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FTH1P5	ENSG00000230204	204681	AL158050.2	ENSG00000270306	257198	chr6:51127635-51127811	None
L1FLnI_6p12.3la	L1	L1	L1FLnI	chr6	51129871	51140401	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158050.2	ENSG00000270306	244881	FTH1P5	ENSG00000230204	216615	None	None
L1FLnI_6p12.3ma	L1	L1	L1FLnI	chr6	51187171	51197319	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL158050.2	ENSG00000270306	187963	FTH1P5	ENSG00000230204	273915	None	None
L1FLnI_6p12.3na	L1	L1	L1FLnI	chr6	51220851	51230996	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FTH1P5	ENSG00000230204	307595	AL158050.2	ENSG00000270306	154286	None	None
L1FLnI_6p12.3oa	L1	L1	L1FLnI	chr6	51342790	51353263	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158050.2	ENSG00000270306	32019	FTH1P5	ENSG00000230204	429534	None	None
L1FLnI_6p12.3pa	L1	L1	L1FLnI	chr6	51479869	51490047	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL445529.1	ENSG00000214641	47108	AL365219.1	ENSG00000212532	15104	None	None
L1FLnI_6p12.3qa	L1	L1	L1FLnI	chr6	51666059	51675471	-	coding	PKHD1	protein_coding	SENSE	ENSG00000170927	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.2a	L1	L1	L1FLnI	chr6	51848420	51858868	-	coding	PKHD1	protein_coding	SENSE	ENSG00000170927	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.2b	L1	L1	L1FLnI	chr6	51848420	51857614	-	coding	PKHD1	protein_coding	SENSE	ENSG00000170927	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.2c	L1	L1	L1FLnI	chr6	51871285	51881277	+	coding	PKHD1	protein_coding	ANTISENSE	ENSG00000170927	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.2d	L1	L1	L1FLnI	chr6	51871285	51881302	+	coding	PKHD1	protein_coding	ANTISENSE	ENSG00000170927	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.2e	L1	L1	L1FLnI	chr6	51892158	51902183	+	coding	PKHD1	protein_coding	ANTISENSE	ENSG00000170927	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.2f	L1	L1	L1FLnI	chr6	52090445	52100603	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR206	ENSG00000207604	43746	PKHD1	ENSG00000170927	2832	None	None
L1FLnI_6p12.2g	L1	L1	L1FLnI	chr6	52427694	52438218	-	noncoding	EFHC1	protein_coding	ANTISENSE	ENSG00000096093	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.2h	L1	L1	L1FLnI	chr6	52770729	52780872	-	coding	GSTA12P	unprocessed_pseudogene	SENSE	ENSG00000217228	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.1a	L1	L1	L1FLnI	chr6	53399552	53409726	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP256	ENSG00000253010	5568	AL591034.2	ENSG00000271338	17349	None	None
L1FLnI_6p12.1b	L1	L1	L1FLnI	chr6	53468649	53478326	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GCLC	ENSG00000001084	19015	NANOGP3	ENSG00000271373	49912	None	None
L1FLnI_6p12.1c	L1	L1	L1FLnI	chr6	53770543	53780671	+	coding	AL590652.1	lncRNA	ANTISENSE	ENSG00000227885	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.1d	L1	L1	L1FLnI	chr6	53777090	53786149	+	coding	AL590652.1	lncRNA	ANTISENSE	ENSG00000227885	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.1e	L1	L1	L1FLnI	chr6	53941694	53952420	+	noncoding	MLIP,AL033384.1	protein_coding,lncRNA	SENSE,SENSE	ENSG00000146147,ENSG00000236740	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.1f	L1	L1	L1FLnI	chr6	54323655	54334129	+	noncoding	TINAG	protein_coding	SENSE	ENSG00000137251	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.1g	L1	L1	L1FLnI	chr6	54323655	54334113	+	noncoding	TINAG	protein_coding	SENSE	ENSG00000137251	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.1h	L1	L1	L1FLnI	chr6	54957931	54967951	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL049555.1	ENSG00000261116	12832	HCRTR2	ENSG00000137252	138509	None	None
L1FLnI_6p12.1i	L1	L1	L1FLnI	chr6	54957931	54967937	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL049555.1	ENSG00000261116	12832	HCRTR2	ENSG00000137252	138523	None	None
L1FLnI_6p12.1j	L1	L1	L1FLnI	chr6	55026971	55036359	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HCRTR2	ENSG00000137252	70101	AL049555.1	ENSG00000261116	81872	None	None
L1FLnI_6p12.1k	L1	L1	L1FLnI	chr6	55086366	55095683	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL049555.1	ENSG00000261116	141267	HCRTR2	ENSG00000137252	10777	None	None
L1FLnI_6p12.1l	L1	L1	L1FLnI	chr6	55105487	55114780	+	noncoding	HCRTR2	protein_coding	SENSE	ENSG00000137252	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.1m	L1	L1	L1FLnI	chr6	55154508	55163466	+	noncoding	HCRTR2	protein_coding	SENSE	ENSG00000137252	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.1n	L1	L1	L1FLnI	chr6	55337049	55347204	+	coding	GFRAL	protein_coding	SENSE	ENSG00000187871	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.1o	L1	L1	L1FLnI	chr6	55362938	55372967	-	coding	GFRAL	protein_coding	ANTISENSE	ENSG00000187871	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.1p	L1	L1	L1FLnI	chr6	55681159	55691187	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590290.1	ENSG00000220725	138	BMP5	ENSG00000112175	62466	None	None
L1FLnI_6p12.1q	L1	L1	L1FLnI	chr6	55681159	55691199	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590290.1	ENSG00000220725	138	BMP5	ENSG00000112175	62454	None	None
L1FLnI_6p12.1r	L1	L1	L1FLnI	chr6	55732041	55742184	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590290.1	ENSG00000220725	51020	BMP5	ENSG00000112175	11469	None	None
L1FLnI_6p12.1s	L1	L1	L1FLnI	chr6	56111816	56121013	+	noncoding	COL21A1	protein_coding	ANTISENSE	ENSG00000124749	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.1t	L1	L1	L1FLnI	chr6	56200174	56210768	+	noncoding	COL21A1	protein_coding	ANTISENSE	ENSG00000124749	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.1u	L1	L1	L1FLnI	chr6	56301213	56311370	-	coding	COL21A1	protein_coding	SENSE	ENSG00000124749	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p12.1v	L1	L1	L1FLnI	chr6	56390054	56398866	+	coding	COL21A1	protein_coding	ANTISENSE	ENSG00000124749	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr6:56394099-56394107,chr6:56394122-56394133,chr6:56394141-56394150,chr6:56394159-56394167
L1FLnI_6p12.1w	L1	L1	L1FLnI	chr6	56779226	56789368	-	coding	DST	protein_coding	SENSE	ENSG00000151914	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p11.2a	L1	L1	L1FLnI	chr6	57268137	57278280	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PRIM2	ENSG00000146143	36525	RAB23	ENSG00000112210	45830	None	None
L1FLnI_6p11.2b	L1	L1	L1FLnI	chr6	57284306	57294481	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAB23	ENSG00000112210	61999	PRIM2	ENSG00000146143	20324	None	None
L1FLnI_6p11.2c	L1	L1	L1FLnI	chr6	57331370	57341371	+	coding	PRIM2	protein_coding	SENSE	ENSG00000146143	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p11.2d	L1	L1	L1FLnI	chr6	57392182	57401216	-	noncoding	PRIM2	protein_coding	ANTISENSE	ENSG00000146143	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p11.2e	L1	L1	L1FLnI	chr6	57451283	57461423	-	coding	PRIM2	protein_coding	ANTISENSE	ENSG00000146143	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p11.2f	L1	L1	L1FLnI	chr6	57633281	57642872	+	noncoding	PRIM2	protein_coding	SENSE	ENSG00000146143	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p11.2g	L1	L1	L1FLnI	chr6	57675861	57686141	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRIM2	ENSG00000146143	29011	AL021368.3	ENSG00000272541	169750	None	None
L1FLnI_6p11.2h	L1	L1	L1FLnI	chr6	57696929	57707042	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PRIM2	ENSG00000146143	50079	AL021368.3	ENSG00000272541	148849	None	None
L1FLnI_6p11.2i	L1	L1	L1FLnI	chr6	58076975	58086201	+	noncoding	AL445250.1	lncRNA	SENSE	ENSG00000225096	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p11.2j	L1	L1	L1FLnI	chr6	58226125	58236247	-	noncoding	AL445250.1	lncRNA	ANTISENSE	ENSG00000225096	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p11.2k	L1	L1	L1FLnI	chr6	58232252	58241431	-	noncoding	AL445250.1	lncRNA	ANTISENSE	ENSG00000225096	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p11.2l	L1	L1	L1FLnI	chr6	58312674	58323061	+	noncoding	AL445250.1	lncRNA	SENSE	ENSG00000225096	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6p11.2m	L1	L1	L1FLnI	chr6	58390300	58400440	+	noncoding	AL445250.1	lncRNA	SENSE	ENSG00000225096	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q11.1a	L1	L1	L1FLnI	chr6	60293715	60302760	-	noncoding	AC244258.1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000283453	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q11.1b	L1	L1	L1FLnI	chr6	60344220	60354382	-	coding	AC244258.1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000283453	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr6:60354159-60354166,chr6:60354272-60354279,chr6:60354298-60354314
L1FLnI_6q11.1c	L1	L1	L1FLnI	chr6	60454845	60464873	-	coding	AC244258.1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000283453	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q11.1d	L1	L1	L1FLnI	chr6	60532371	60542002	+	noncoding	AC244258.1	transcribed_unprocessed_pseudogene	SENSE	ENSG00000283453	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q11.1e	L1	L1	L1FLnI	chr6	60575209	60585508	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC244258.1	ENSG00000283453	28549	GAPDHP41	ENSG00000277172	133714	None	None
L1FLnI_6q11.1f	L1	L1	L1FLnI	chr6	60596351	60606469	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC244258.1	ENSG00000283453	49691	GAPDHP41	ENSG00000277172	112753	None	None
L1FLnI_6q11.1g	L1	L1	L1FLnI	chr6	60615995	60626018	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP41	ENSG00000277172	93204	AC244258.1	ENSG00000283453	69335	None	None
L1FLnI_6q11.1h	L1	L1	L1FLnI	chr6	60616009	60626018	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP41	ENSG00000277172	93204	AC244258.1	ENSG00000283453	69349	None	None
L1FLnI_6q11.1i	L1	L1	L1FLnI	chr6	60629294	60639418	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP41	ENSG00000277172	79804	AC244258.1	ENSG00000283453	82634	None	None
L1FLnI_6q11.1j	L1	L1	L1FLnI	chr6	60828743	60837976	+	noncoding	AL512427.2	lncRNA	SENSE	ENSG00000287598	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q11.1k	L1	L1	L1FLnI	chr6	60980455	60990574	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL356131.1	ENSG00000220030	250324	AL512427.2	ENSG00000287598	38128	None	None
L1FLnI_6q11.1l	L1	L1	L1FLnI	chr6	60986579	60995744	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356131.1	ENSG00000220030	245154	AL512427.2	ENSG00000287598	44252	None	None
L1FLnI_6q11.1m	L1	L1	L1FLnI	chr6	61046907	61057058	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL356131.1	ENSG00000220030	183840	AL512427.2	ENSG00000287598	104580	None	None
L1FLnI_6q11.1n	L1	L1	L1FLnI	chr6	61127538	61137932	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356131.1	ENSG00000220030	102966	AL512427.2	ENSG00000287598	185211	None	None
L1FLnI_6q11.1o	L1	L1	L1FLnI	chr6	61180381	61190112	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL512427.2	ENSG00000287598	238054	AL356131.1	ENSG00000220030	50786	None	None
L1FLnI_6q11.1p	L1	L1	L1FLnI	chr6	61227162	61237126	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512427.2	ENSG00000287598	284835	AL356131.1	ENSG00000220030	3772	None	None
L1FLnI_6q11.1q	L1	L1	L1FLnI	chr6	61517241	61525895	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL356131.1	ENSG00000220030	275930	MTRNR2L9	ENSG00000255633	48433	None	None
L1FLnI_6q11.1r	L1	L1	L1FLnI	chr6	61527993	61538397	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356131.1	ENSG00000220030	286682	MTRNR2L9	ENSG00000255633	35931	None	None
L1FLnI_6q11.1s	L1	L1	L1FLnI	chr6	61550571	61559817	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTRNR2L9	ENSG00000255633	14511	AL356131.1	ENSG00000220030	309260	None	None
L1FLnI_6q11.1t	L1	L1	L1FLnI	chr6	61564901	61574008	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356131.1	ENSG00000220030	323590	MTRNR2L9	ENSG00000255633	320	None	None
L1FLnI_6q11.1u	L1	L1	L1FLnI	chr6	61720067	61728967	+	noncoding	KHDRBS2	protein_coding	ANTISENSE	ENSG00000112232	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q11.1v	L1	L1	L1FLnI	chr6	61720086	61728967	+	noncoding	KHDRBS2	protein_coding	ANTISENSE	ENSG00000112232	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q11.1w	L1	L1	L1FLnI	chr6	61859778	61868764	-	noncoding	KHDRBS2	protein_coding	SENSE	ENSG00000112232	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q11.1x	L1	L1	L1FLnI	chr6	62165912	62174875	+	noncoding	KHDRBS2	protein_coding	ANTISENSE	ENSG00000112232	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:62168844-62169243	None
L1FLnI_6q11.1y	L1	L1	L1FLnI	chr6	62308542	62318695	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	KHDRBS2	ENSG00000112232	22317	DHFRP5	ENSG00000216859	142245	None	None
L1FLnI_6q11.1z	L1	L1	L1FLnI	chr6	62334731	62344178	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	KHDRBS2	ENSG00000112232	48506	DHFRP5	ENSG00000216859	116762	None	None
L1FLnI_6q11.1aa	L1	L1	L1FLnI	chr6	62334731	62344179	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	KHDRBS2	ENSG00000112232	48506	DHFRP5	ENSG00000216859	116761	None	None
L1FLnI_6q11.1ba	L1	L1	L1FLnI	chr6	62436245	62445189	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DHFRP5	ENSG00000216859	15751	KHDRBS2	ENSG00000112232	150020	None	None
L1FLnI_6q11.1ca	L1	L1	L1FLnI	chr6	62488228	62498687	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	DHFRP5	ENSG00000216859	26725	AL355375.1	ENSG00000217067	48740	None	None
L1FLnI_6q12a	L1	L1	L1FLnI	chr6	62934134	62942958	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450346.1	ENSG00000217477	250114	AL355375.2	ENSG00000262566	322807	None	None
L1FLnI_6q12b	L1	L1	L1FLnI	chr6	62934173	62942958	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450346.1	ENSG00000217477	250114	AL355375.2	ENSG00000262566	322846	None	None
L1FLnI_6q12c	L1	L1	L1FLnI	chr6	63069780	63079924	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450346.1	ENSG00000217477	113148	AL355375.2	ENSG00000262566	458453	None	None
L1FLnI_6q12d	L1	L1	L1FLnI	chr6	63163489	63173626	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355375.2	ENSG00000262566	552162	AL450346.1	ENSG00000217477	19446	None	None
L1FLnI_6q12e	L1	L1	L1FLnI	chr6	63163489	63173651	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355375.2	ENSG00000262566	552162	AL450346.1	ENSG00000217477	19421	None	None
L1FLnI_6q12f	L1	L1	L1FLnI	chr6	63825611	63835714	+	coding	EYS	protein_coding	ANTISENSE	ENSG00000188107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q12g	L1	L1	L1FLnI	chr6	63872505	63882592	-	coding	EYS	protein_coding	SENSE	ENSG00000188107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q12h	L1	L1	L1FLnI	chr6	63883864	63894226	+	noncoding	EYS	protein_coding	ANTISENSE	ENSG00000188107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q12i	L1	L1	L1FLnI	chr6	64003960	64012785	-	noncoding	EYS	protein_coding	SENSE	ENSG00000188107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q12j	L1	L1	L1FLnI	chr6	64091254	64101259	-	coding	EYS	protein_coding	SENSE	ENSG00000188107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:64100938-64101253	None
L1FLnI_6q12k	L1	L1	L1FLnI	chr6	64308079	64318683	+	coding	EYS	protein_coding	ANTISENSE	ENSG00000188107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q12l	L1	L1	L1FLnI	chr6	64367449	64378233	-	noncoding	EYS,AL357375.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000188107,ENSG00000232120	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q12m	L1	L1	L1FLnI	chr6	64386262	64396296	+	coding	EYS,AL357375.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000188107,ENSG00000232120	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q12n	L1	L1	L1FLnI	chr6	64444493	64454520	+	coding	EYS	protein_coding	ANTISENSE	ENSG00000188107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q12o	L1	L1	L1FLnI	chr6	64566261	64574921	+	noncoding	EYS	protein_coding	ANTISENSE	ENSG00000188107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q12p	L1	L1	L1FLnI	chr6	64747167	64755988	+	noncoding	EYS	protein_coding	ANTISENSE	ENSG00000188107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q12q	L1	L1	L1FLnI	chr6	65089254	65098446	+	noncoding	EYS	protein_coding	ANTISENSE	ENSG00000188107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q12r	L1	L1	L1FLnI	chr6	65740636	65750856	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EYS	ENSG00000188107	33410	SLC25A51P1	ENSG00000220483	37561	None	None
L1FLnI_6q12s	L1	L1	L1FLnI	chr6	65768582	65778702	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	EYS	ENSG00000188107	61356	SLC25A51P1	ENSG00000220483	9715	None	None
L1FLnI_6q12t	L1	L1	L1FLnI	chr6	65967785	65977648	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ADH5P4	ENSG00000233859	129746	NUFIP1P1	ENSG00000218890	115783	None	None
L1FLnI_6q12u	L1	L1	L1FLnI	chr6	66119890	66129398	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450336.1	ENSG00000270521	580844	NUFIP1P1	ENSG00000218890	24981	None	None
L1FLnI_6q12v	L1	L1	L1FLnI	chr6	66368689	66377388	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450336.1	ENSG00000270521	332854	NUFIP1P1	ENSG00000218890	273780	None	None
L1FLnI_6q12w	L1	L1	L1FLnI	chr6	66485446	66495654	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NUFIP1P1	ENSG00000218890	390537	AL450336.1	ENSG00000270521	214588	None	None
L1FLnI_6q12x	L1	L1	L1FLnI	chr6	66537429	66547577	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NUFIP1P1	ENSG00000218890	442520	AL450336.1	ENSG00000270521	162665	None	None
L1FLnI_6q12y	L1	L1	L1FLnI	chr6	66552478	66562400	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450336.1	ENSG00000270521	147842	NUFIP1P1	ENSG00000218890	457569	None	None
L1FLnI_6q12z	L1	L1	L1FLnI	chr6	66627336	66637483	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NUFIP1P1	ENSG00000218890	532427	AL450336.1	ENSG00000270521	72759	None	None
L1FLnI_6q12aa	L1	L1	L1FLnI	chr6	66783715	66793843	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-66P	ENSG00000238949	54811	AL591004.1	ENSG00000212229	416565	None	None
L1FLnI_6q12ba	L1	L1	L1FLnI	chr6	66869283	66878742	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL591004.1	ENSG00000212229	331666	RNU7-66P	ENSG00000238949	140379	None	None
L1FLnI_6q12ca	L1	L1	L1FLnI	chr6	66982246	66991075	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591004.1	ENSG00000212229	219333	RNU7-66P	ENSG00000238949	253342	None	None
L1FLnI_6q12da	L1	L1	L1FLnI	chr6	67091916	67102049	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-66P	ENSG00000238949	363012	AL591004.1	ENSG00000212229	108359	None	None
L1FLnI_6q12ea	L1	L1	L1FLnI	chr6	67260752	67270433	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL365503.1	ENSG00000271111	185913	AL591004.1	ENSG00000212229	50272	None	None
L1FLnI_6q12fa	L1	L1	L1FLnI	chr6	67260752	67269855	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL365503.1	ENSG00000271111	186491	AL591004.1	ENSG00000212229	50272	None	None
L1FLnI_6q12ga	L1	L1	L1FLnI	chr6	67295007	67304592	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL365503.1	ENSG00000271111	151754	AL591004.1	ENSG00000212229	84527	None	None
L1FLnI_6q12ha	L1	L1	L1FLnI	chr6	67421949	67431851	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL365503.1	ENSG00000271111	24495	AL591004.1	ENSG00000212229	211469	None	None
L1FLnI_6q12ia	L1	L1	L1FLnI	chr6	67551860	67562296	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049860.1	ENSG00000206672	63060	RNU6-280P	ENSG00000201015	5106	None	None
L1FLnI_6q12ja	L1	L1	L1FLnI	chr6	67582480	67591153	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049860.1	ENSG00000206672	34203	RNU6-280P	ENSG00000201015	35726	None	None
L1FLnI_6q12ka	L1	L1	L1FLnI	chr6	67707153	67716366	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL713998.1	ENSG00000227706	161950	AL049860.1	ENSG00000206672	81689	None	None
L1FLnI_6q12la	L1	L1	L1FLnI	chr6	67728091	67738511	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL713998.1	ENSG00000227706	139805	AL049860.1	ENSG00000206672	102627	None	None
L1FLnI_6q12ma	L1	L1	L1FLnI	chr6	68193283	68202386	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL646090.2	ENSG00000285838	100282	AL593844.1	ENSG00000286564	21281	chr6:68196762-68196774	None
L1FLnI_6q12na	L1	L1	L1FLnI	chr6	68280375	68290557	+	coding	LINC02549	lncRNA	ANTISENSE	ENSG00000226497	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q12oa	L1	L1	L1FLnI	chr6	68280375	68290588	+	coding	LINC02549	lncRNA	ANTISENSE	ENSG00000226497	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q12pa	L1	L1	L1FLnI	chr6	68379627	68388593	-	noncoding	AL606923.2	lncRNA	SENSE	ENSG00000288088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q12qa	L1	L1	L1FLnI	chr6	68450118	68460200	-	noncoding	AL606923.2	lncRNA	SENSE	ENSG00000288088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q12ra	L1	L1	L1FLnI	chr6	68522470	68531581	-	noncoding	AL606923.2	lncRNA	SENSE	ENSG00000288088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q12sa	L1	L1	L1FLnI	chr6	68568772	68577311	-	noncoding	AL606923.2	lncRNA	SENSE	ENSG00000288088	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q12ta	L1	L1	L1FLnI	chr6	68784660	68793668	-	coding	ADGRB3	protein_coding	ANTISENSE	ENSG00000135298	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q12ua	L1	L1	L1FLnI	chr6	69146221	69155180	-	noncoding	ADGRB3	protein_coding	ANTISENSE	ENSG00000135298	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q13a	L1	L1	L1FLnI	chr6	69439041	69449068	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LMBRD1	ENSG00000168216	223689	ADGRB3	ENSG00000135298	49535	None	None
L1FLnI_6q13b	L1	L1	L1FLnI	chr6	69476709	69486854	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ADGRB3	ENSG00000135298	87203	LMBRD1	ENSG00000168216	185903	None	None
L1FLnI_6q13c	L1	L1	L1FLnI	chr6	69491864	69501885	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ADGRB3	ENSG00000135298	102358	LMBRD1	ENSG00000168216	170872	None	None
L1FLnI_6q13d	L1	L1	L1FLnI	chr6	69511645	69521669	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ADGRB3	ENSG00000135298	122139	LMBRD1	ENSG00000168216	151088	None	None
L1FLnI_6q13e	L1	L1	L1FLnI	chr6	69556665	69567140	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ADGRB3	ENSG00000135298	167159	LMBRD1	ENSG00000168216	105617	None	None
L1FLnI_6q13f	L1	L1	L1FLnI	chr6	69718592	69727371	+	noncoding	LMBRD1	protein_coding	ANTISENSE	ENSG00000168216	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q13g	L1	L1	L1FLnI	chr6	69764728	69774034	-	noncoding	LMBRD1	protein_coding	SENSE	ENSG00000168216	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:69769687-69770082,chr6:69774032-69774254	chr6:69774032-69774034
L1FLnI_6q13h	L1	L1	L1FLnI	chr6	69999384	70008334	-	noncoding	COL19A1	protein_coding	ANTISENSE	ENSG00000082293	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q13i	L1	L1	L1FLnI	chr6	70006849	70017052	+	coding	COL19A1	protein_coding	SENSE	ENSG00000082293	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:70008361-70008747	None
L1FLnI_6q13j	L1	L1	L1FLnI	chr6	70314065	70324219	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	COL9A1	ENSG00000112280	10982	AL080275.1	ENSG00000287300	21700	None	None
L1FLnI_6q13k	L1	L1	L1FLnI	chr6	70330138	70340590	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL080275.1	ENSG00000287300	5329	COL9A1	ENSG00000112280	27055	None	None
L1FLnI_6q13l	L1	L1	L1FLnI	chr6	70342344	70351243	-	noncoding	AL080275.1	lncRNA	SENSE	ENSG00000287300	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q13m	L1	L1	L1FLnI	chr6	70495759	70505415	-	coding	FAM135A	protein_coding	ANTISENSE	ENSG00000082269	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q13n	L1	L1	L1FLnI	chr6	70765249	70775397	-	coding	SMAP1	protein_coding	ANTISENSE	ENSG00000112305	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q13o	L1	L1	L1FLnI	chr6	70779393	70788969	+	coding	SMAP1	protein_coding	SENSE	ENSG00000112305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q13p	L1	L1	L1FLnI	chr6	70800021	70810117	-	noncoding	SMAP1	protein_coding	ANTISENSE	ENSG00000112305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q13q	L1	L1	L1FLnI	chr6	70914293	70922986	-	noncoding	B3GAT2	protein_coding	SENSE	ENSG00000112309	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q13r	L1	L1	L1FLnI	chr6	70921677	70931845	+	noncoding	B3GAT2	protein_coding	ANTISENSE	ENSG00000112309	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q13s	L1	L1	L1FLnI	chr6	70940594	70950717	+	coding	B3GAT2	protein_coding	ANTISENSE	ENSG00000112309	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q13t	L1	L1	L1FLnI	chr6	70970674	70980795	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	B3GAT2	ENSG00000112309	13614	AL096709.2	ENSG00000287939	47787	None	None
L1FLnI_6q13u	L1	L1	L1FLnI	chr6	70994203	71004654	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	B3GAT2	ENSG00000112309	37143	AL096709.2	ENSG00000287939	23928	None	None
L1FLnI_6q13v	L1	L1	L1FLnI	chr6	71094773	71105347	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL096709.1	ENSG00000221345	21546	BECN1P2	ENSG00000219669	18398	None	None
L1FLnI_6q13w	L1	L1	L1FLnI	chr6	71135060	71146864	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL096709.1	ENSG00000221345	7955	LYPLA1P3	ENSG00000218350	18212	chr6:71146799-71147028	None
L1FLnI_6q13x	L1	L1	L1FLnI	chr6	71267016	71277165	+	coding	AL589935.1	lncRNA	ANTISENSE	ENSG00000232295	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q13y	L1	L1	L1FLnI	chr6	71354863	71365287	-	coding	AL136164.2,LINC00472	lncRNA,lncRNA	SENSE,SENSE	ENSG00000269966,ENSG00000233237	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q13z	L1	L1	L1FLnI	chr6	71630047	71640279	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU4-66P	ENSG00000202069	12195	KRT19P1	ENSG00000218014	44141	None	None
L1FLnI_6q13aa	L1	L1	L1FLnI	chr6	71797085	71807718	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RIMS1	ENSG00000079841	78985	RNU4-66P	ENSG00000202069	144474	None	None
L1FLnI_6q13ba	L1	L1	L1FLnI	chr6	71797107	71807718	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RIMS1	ENSG00000079841	78985	RNU4-66P	ENSG00000202069	144496	None	None
L1FLnI_6q13ca	L1	L1	L1FLnI	chr6	71826217	71836234	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RIMS1	ENSG00000079841	50469	RNU4-66P	ENSG00000202069	173606	None	None
L1FLnI_6q13da	L1	L1	L1FLnI	chr6	72002845	72012987	+	noncoding	RIMS1	protein_coding	SENSE	ENSG00000079841	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q13ea	L1	L1	L1FLnI	chr6	72157914	72168033	-	coding	RIMS1	protein_coding	ANTISENSE	ENSG00000079841	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q13fa	L1	L1	L1FLnI	chr6	72465934	72476086	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RIMS1	ENSG00000079841	62791	FO393414.2	ENSG00000217483	46555	None	None
L1ORF2_6q13	L1	L1	L1ORF2	chr6	72569137	72577181	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FO393414.2	ENSG00000217483	45899	FO393414.1	ENSG00000181514	21270	None	None
L1FLnI_6q13ga	L1	L1	L1FLnI	chr6	72900680	72910428	-	coding	KCNQ5	protein_coding	ANTISENSE	ENSG00000185760	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_6q13	L1	L1	L1FLI	chr6	72987642	72995688	-	coding	KCNQ5,KNOP1P4	protein_coding,processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000185760,ENSG00000232422	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q13ha	L1	L1	L1FLnI	chr6	73834884	73844925	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590552.1	ENSG00000279790	126421	CD109	ENSG00000156535	6568	None	None
L1FLnI_6q13ia	L1	L1	L1FLnI	chr6	73914014	73924167	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CD109	ENSG00000156535	85698	AL590552.1	ENSG00000279790	47179	None	None
L1FLnI_6q13ja	L1	L1	L1FLnI	chr6	74006669	74016506	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL357507.1	ENSG00000223786	52945	TXNP7	ENSG00000217268	1857	None	None
L1FLnI_6q13ka	L1	L1	L1FLnI	chr6	74030319	74039332	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357507.1	ENSG00000223786	30119	TXNP7	ENSG00000217268	25507	None	None
L1FLnI_6q13la	L1	L1	L1FLnI	chr6	74188255	74197322	-	noncoding	AL357507.1	lncRNA	ANTISENSE	ENSG00000223786	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q13ma	L1	L1	L1FLnI	chr6	74216823	74226945	-	noncoding	AL357507.1	lncRNA	ANTISENSE	ENSG00000223786	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q13na	L1	L1	L1FLnI	chr6	74236614	74248179	-	noncoding	AL357507.1	lncRNA	ANTISENSE	ENSG00000223786	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q13oa	L1	L1	L1FLnI	chr6	74337246	74347420	-	coding	AL357507.1	lncRNA	ANTISENSE	ENSG00000223786	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q13pa	L1	L1	L1FLnI	chr6	74372560	74382582	-	noncoding	AL357507.1	lncRNA	ANTISENSE	ENSG00000223786	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q13qa	L1	L1	L1FLnI	chr6	74656517	74666651	+	coding	AL357507.1,AL356277.3	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000223786,ENSG00000272243	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q13ra	L1	L1	L1FLnI	chr6	74777037	74785637	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356277.3	ENSG00000272243	42718	AL356473.1	ENSG00000219736	63440	None	None
L1FLnI_6q13sa	L1	L1	L1FLnI	chr6	74882785	74892925	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	COL12A1	ENSG00000111799	191401	AL356473.1	ENSG00000219736	32301	None	None
L1FLnI_6q13ta	L1	L1	L1FLnI	chr6	74893100	74902464	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	COL12A1	ENSG00000111799	181862	AL356473.1	ENSG00000219736	42616	None	chr6:74901479-74901482
L1FLnI_6q13ua	L1	L1	L1FLnI	chr6	74893616	74902464	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	COL12A1	ENSG00000111799	181862	AL356473.1	ENSG00000219736	43132	None	chr6:74901479-74901482
L1FLnI_6q13va	L1	L1	L1FLnI	chr6	74900263	74910412	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL356473.1	ENSG00000219736	49779	COL12A1	ENSG00000111799	173914	None	chr6:74901479-74901482
L1FLnI_6q13wa	L1	L1	L1FLnI	chr6	74959882	74970035	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	COL12A1	ENSG00000111799	114291	AL356473.1	ENSG00000219736	109398	None	None
L1FLnI_6q13xa	L1	L1	L1FLnI	chr6	75009469	75018958	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL356473.1	ENSG00000219736	158985	COL12A1	ENSG00000111799	65368	None	None
L1FLnI_6q14.1a	L1	L1	L1FLnI	chr6	75681907	75692029	-	coding	SENP6	protein_coding	ANTISENSE	ENSG00000112701	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1b	L1	L1	L1FLnI	chr6	75899243	75909245	-	coding	MYO6	protein_coding	ANTISENSE	ENSG00000196586	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1c	L1	L1	L1FLnI	chr6	76060439	76069010	+	noncoding	IMPG1	protein_coding	ANTISENSE	ENSG00000112706	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr6:76065712-76065716
L1FLnI_6q14.1d	L1	L1	L1FLnI	chr6	76105120	76115141	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-261P	ENSG00000238697	331847	RNU6-248P	ENSG00000222652	12180	None	None
L1FLnI_6q14.1e	L1	L1	L1FLnI	chr6	76113537	76122414	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-261P	ENSG00000238697	324574	RNU6-248P	ENSG00000222652	20597	None	None
L1FLnI_6q14.1f	L1	L1	L1FLnI	chr6	76137401	76147382	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-261P	ENSG00000238697	299606	RNU6-248P	ENSG00000222652	44461	None	None
L1FLnI_6q14.1g	L1	L1	L1FLnI	chr6	76293046	76303176	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-261P	ENSG00000238697	143812	RNU6-248P	ENSG00000222652	200106	None	None
L1FLnI_6q14.1h	L1	L1	L1FLnI	chr6	76331849	76340553	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-261P	ENSG00000238697	106435	RNU6-248P	ENSG00000222652	238909	None	None
L1FLnI_6q14.1i	L1	L1	L1FLnI	chr6	76368934	76379091	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-261P	ENSG00000238697	67897	RNU6-248P	ENSG00000222652	275994	None	None
L1FLnI_6q14.1j	L1	L1	L1FLnI	chr6	76745151	76754642	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL355612.1	ENSG00000271945	20330	AL590426.1	ENSG00000231762	82381	None	None
L1FLnI_6q14.1k	L1	L1	L1FLnI	chr6	76745161	76754642	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL355612.1	ENSG00000271945	20330	AL590426.1	ENSG00000231762	82391	None	None
L1FLnI_6q14.1l	L1	L1	L1FLnI	chr6	76899710	76909729	-	coding	AL355612.1	lncRNA	ANTISENSE	ENSG00000271945	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1m	L1	L1	L1FLnI	chr6	76899724	76909729	-	coding	AL355612.1	lncRNA	ANTISENSE	ENSG00000271945	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1n	L1	L1	L1FLnI	chr6	76937609	76946250	+	noncoding	AL355612.1	lncRNA	SENSE	ENSG00000271945	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1o	L1	L1	L1FLnI	chr6	76955467	76965525	+	coding	AL355612.1	lncRNA	SENSE	ENSG00000271945	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr6:76956042-76956044
L1FLnI_6q14.1p	L1	L1	L1FLnI	chr6	76955467	76965497	+	coding	AL355612.1	lncRNA	SENSE	ENSG00000271945	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr6:76956042-76956044
L1FLnI_6q14.1q	L1	L1	L1FLnI	chr6	77071984	77082398	+	noncoding	AL355612.1	lncRNA	SENSE	ENSG00000271945	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1r	L1	L1	L1FLnI	chr6	77081979	77091996	-	coding	AL355612.1	lncRNA	ANTISENSE	ENSG00000271945	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1s	L1	L1	L1FLnI	chr6	77248034	77258169	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL355612.1	ENSG00000271945	150246	AL365222.1	ENSG00000276064	85388	None	None
L1FLnI_6q14.1t	L1	L1	L1FLnI	chr6	77514717	77524998	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS6P7	ENSG00000219253	18046	MEI4	ENSG00000269964	125276	None	None
L1FLnI_6q14.1u	L1	L1	L1FLnI	chr6	77693766	77702672	-	coding	MEI4	protein_coding	ANTISENSE	ENSG00000269964	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1v	L1	L1	L1FLnI	chr6	77730107	77740161	-	coding	MEI4	protein_coding	ANTISENSE	ENSG00000269964	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1w	L1	L1	L1FLnI	chr6	77730128	77740161	-	coding	MEI4	protein_coding	ANTISENSE	ENSG00000269964	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1x	L1	L1	L1FLnI	chr6	77745339	77754764	+	noncoding	MEI4	protein_coding	SENSE	ENSG00000269964	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1y	L1	L1	L1FLnI	chr6	77797993	77808102	-	noncoding	MEI4	protein_coding	ANTISENSE	ENSG00000269964	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1z	L1	L1	L1FLnI	chr6	77858583	77868724	+	coding	MEI4	protein_coding	SENSE	ENSG00000269964	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1aa	L1	L1	L1FLnI	chr6	77990583	78000693	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL121718.1	ENSG00000230309	603774	MEI4	ENSG00000269964	63555	None	None
L1FLnI_6q14.1ba	L1	L1	L1FLnI	chr6	78400697	78409628	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121718.1	ENSG00000230309	194839	MEI4	ENSG00000269964	473669	None	None
L1FLnI_6q14.1ca	L1	L1	L1FLnI	chr6	78463710	78473845	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MEI4	ENSG00000269964	536682	AL121718.1	ENSG00000230309	130622	None	None
L1FLnI_6q14.1da	L1	L1	L1FLnI	chr6	78496913	78506996	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121718.1	ENSG00000230309	97471	MEI4	ENSG00000269964	569885	None	None
L1FLnI_6q14.1ea	L1	L1	L1FLnI	chr6	78643244	78653381	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL121718.1	ENSG00000230309	37208	AL450327.1	ENSG00000229495	156334	None	None
L1FLnI_6q14.1fa	L1	L1	L1FLnI	chr6	78690814	78700960	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL121718.1	ENSG00000230309	84778	AL450327.1	ENSG00000229495	108755	None	None
L1FLnI_6q14.1ga	L1	L1	L1FLnI	chr6	78754655	78764642	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121718.1	ENSG00000230309	148619	AL450327.1	ENSG00000229495	45073	None	None
L1FLnI_6q14.1ha	L1	L1	L1FLnI	chr6	78802152	78811596	-	noncoding	AL450327.1	lncRNA	SENSE	ENSG00000229495	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1ia	L1	L1	L1FLnI	chr6	78968017	78978029	+	coding	PHIP	protein_coding	ANTISENSE	ENSG00000146247	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1ja	L1	L1	L1FLnI	chr6	79250847	79260931	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL355796.1	ENSG00000220154	17174	HMGN3-AS1	ENSG00000270362	14050	None	None
L1FLnI_6q14.1ka	L1	L1	L1FLnI	chr6	79281174	79291291	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL355796.1	ENSG00000220154	2747	AL355379.1	ENSG00000201464	10672	None	None
L1FLnI_6q14.1la	L1	L1	L1FLnI	chr6	79281174	79291282	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL355796.1	ENSG00000220154	2747	AL355379.1	ENSG00000201464	10681	None	None
L1FLnI_6q14.1ma	L1	L1	L1FLnI	chr6	79319140	79329274	-	coding	AL355379.2	processed_pseudogene	SENSE	ENSG00000217786	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1na	L1	L1	L1FLnI	chr6	79343678	79353433	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355379.2	ENSG00000217786	16471	AL078601.1	ENSG00000218029	1010	None	None
L1FLnI_6q14.1oa	L1	L1	L1FLnI	chr6	79362859	79372520	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL078601.2	ENSG00000262048	33720	AL078601.1	ENSG00000218029	8146	None	None
L1FLnI_6q14.1pa	L1	L1	L1FLnI	chr6	79574158	79584266	+	coding	AL451064.2	TEC	SENSE	ENSG00000279659	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1qa	L1	L1	L1FLnI	chr6	79657647	79667804	-	noncoding	SH3BGRL2	protein_coding	ANTISENSE	ENSG00000198478	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1ra	L1	L1	L1FLnI	chr6	79844520	79853445	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01621	ENSG00000235357	11134	AL132875.1	ENSG00000220918	1239	None	None
L1FLnI_6q14.1sa	L1	L1	L1FLnI	chr6	80405341	80415591	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359715.4	ENSG00000279022	25139	RPL17P25	ENSG00000219547	30772	None	None
L1FLnI_6q14.1ta	L1	L1	L1FLnI	chr6	80412801	80423322	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359715.4	ENSG00000279022	17408	RPL17P25	ENSG00000219547	38232	None	None
L1FLnI_6q14.1ua	L1	L1	L1FLnI	chr6	80414525	80423322	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359715.4	ENSG00000279022	17408	RPL17P25	ENSG00000219547	39956	None	None
L1FLnI_6q14.1va	L1	L1	L1FLnI	chr6	80427383	80437127	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359715.4	ENSG00000279022	3603	RPL17P25	ENSG00000219547	52814	None	None
L1FLnI_6q14.1wa	L1	L1	L1FLnI	chr6	80491760	80501796	-	coding	AL596028.1	processed_pseudogene	SENSE	ENSG00000181705	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1xa	L1	L1	L1FLnI	chr6	80491778	80501796	-	coding	AL596028.1	processed_pseudogene	SENSE	ENSG00000181705	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1ya	L1	L1	L1FLnI	chr6	80567440	80577445	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TENT5A	ENSG00000112773	913994	AL590824.1	ENSG00000216352	10251	None	None
L1FLnI_6q14.1za	L1	L1	L1FLnI	chr6	80599925	80608537	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TENT5A	ENSG00000112773	882902	AL590824.1	ENSG00000216352	42736	None	None
L1FLnI_6q14.1ab	L1	L1	L1FLnI	chr6	80608646	80618709	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590824.1	ENSG00000216352	51457	TENT5A	ENSG00000112773	872730	None	None
L1FLnI_6q14.1bb	L1	L1	L1FLnI	chr6	80680932	80689853	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590824.1	ENSG00000216352	123743	TENT5A	ENSG00000112773	801586	None	None
L1FLnI_6q14.1cb	L1	L1	L1FLnI	chr6	80742058	80750877	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590824.1	ENSG00000216352	184869	TENT5A	ENSG00000112773	740562	None	None
L1FLnI_6q14.1db	L1	L1	L1FLnI	chr6	80755110	80763680	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TENT5A	ENSG00000112773	727759	AL590824.1	ENSG00000216352	197921	chr6:80760278-80760288	None
L1FLnI_6q14.1eb	L1	L1	L1FLnI	chr6	80817320	80826645	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590824.1	ENSG00000216352	260131	TENT5A	ENSG00000112773	664794	None	None
L1FLnI_6q14.1fb	L1	L1	L1FLnI	chr6	80844241	80854276	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590824.1	ENSG00000216352	287052	TENT5A	ENSG00000112773	637163	None	None
L1FLnI_6q14.1gb	L1	L1	L1FLnI	chr6	80931243	80941236	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TENT5A	ENSG00000112773	550203	AL590824.1	ENSG00000216352	374054	None	None
L1FLnI_6q14.1hb	L1	L1	L1FLnI	chr6	80931650	80941236	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TENT5A	ENSG00000112773	550203	AL590824.1	ENSG00000216352	374461	None	None
L1FLnI_6q14.1ib	L1	L1	L1FLnI	chr6	81011596	81021711	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TENT5A	ENSG00000112773	469728	AL590824.1	ENSG00000216352	454407	None	None
L1FLnI_6q14.1jb	L1	L1	L1FLnI	chr6	81111567	81121683	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TENT5A	ENSG00000112773	369756	AL590824.1	ENSG00000216352	554378	None	None
L1FLnI_6q14.1kb	L1	L1	L1FLnI	chr6	81134374	81143717	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590824.1	ENSG00000216352	577185	TENT5A	ENSG00000112773	347722	chr6:81139116-81139509	None
L1FLnI_6q14.1lb	L1	L1	L1FLnI	chr6	81465351	81474671	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590824.1	ENSG00000216352	908162	TENT5A	ENSG00000112773	16768	None	None
L1FLnI_6q14.1mb	L1	L1	L1FLnI	chr6	81575065	81585196	+	coding	TENT5A	protein_coding	ANTISENSE	ENSG00000112773	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1nb	L1	L1	L1FLnI	chr6	81865796	81876245	+	noncoding	LINC02542	lncRNA	ANTISENSE	ENSG00000226453	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1ob	L1	L1	L1FLnI	chr6	81952537	81962676	-	coding	LINC02542	lncRNA	SENSE	ENSG00000226453	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1pb	L1	L1	L1FLnI	chr6	82097805	82107812	+	coding	LINC02542	lncRNA	ANTISENSE	ENSG00000226453	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1qb	L1	L1	L1FLnI	chr6	82103808	82112971	+	coding	LINC02542	lncRNA	ANTISENSE	ENSG00000226453	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1rb	L1	L1	L1FLnI	chr6	82123690	82132656	-	coding	LINC02542	lncRNA	SENSE	ENSG00000226453	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1sb	L1	L1	L1FLnI	chr6	82148917	82157893	+	noncoding	LINC02542	lncRNA	ANTISENSE	ENSG00000226453	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.1tb	L1	L1	L1FLnI	chr6	82278566	82288149	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121977.2	ENSG00000286875	65712	AL121977.1	ENSG00000220537	13592	None	None
L1FLnI_6q14.1ub	L1	L1	L1FLnI	chr6	82388921	82398925	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	UBE3D	ENSG00000118420	493465	TPBG	ENSG00000146242	18093	chr6:82397085-82397300	chr6:82395039-82395059
L1FLnI_6q14.1vb	L1	L1	L1FLnI	chr6	82466008	82476149	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TPBG	ENSG00000146242	95180	UBE3D	ENSG00000118420	416241	None	None
L1FLnI_6q14.1wb	L1	L1	L1FLnI	chr6	82495970	82506082	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	UBE3D	ENSG00000118420	386308	TPBG	ENSG00000146242	125142	None	None
L1FLnI_6q14.1xb	L1	L1	L1FLnI	chr6	82508823	82518923	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TPBG	ENSG00000146242	137995	UBE3D	ENSG00000118420	373467	None	None
L1FLnI_6q14.1yb	L1	L1	L1FLnI	chr6	82554905	82564923	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TPBG	ENSG00000146242	184077	UBE3D	ENSG00000118420	327467	None	None
L1FLnI_6q14.1zb	L1	L1	L1FLnI	chr6	82629332	82638705	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TPBG	ENSG00000146242	258504	UBE3D	ENSG00000118420	253685	None	None
L1FLnI_6q14.1ac	L1	L1	L1FLnI	chr6	82848528	82857588	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TPBG	ENSG00000146242	477700	UBE3D	ENSG00000118420	34802	None	None
L1FLnI_6q14.1bc	L1	L1	L1FLnI	chr6	82940169	82950986	+	noncoding	UBE3D	protein_coding	ANTISENSE	ENSG00000118420	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.2a	L1	L1	L1FLnI	chr6	83286659	83296777	-	coding	ME1	protein_coding	SENSE	ENSG00000065833	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.2b	L1	L1	L1FLnI	chr6	83317361	83327404	+	noncoding	ME1	protein_coding	ANTISENSE	ENSG00000065833	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_6q14.2	L1	L1	L1ORF2	chr6	83332952	83340997	+	coding	ME1	protein_coding	ANTISENSE	ENSG00000065833	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.2c	L1	L1	L1FLnI	chr6	83492172	83502299	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ME1	ENSG00000065833	61121	PRSS35	ENSG00000146250	10235	None	None
L1FLnI_6q14.2d	L1	L1	L1FLnI	chr6	83542854	83553128	+	coding	SNAP91	protein_coding	ANTISENSE	ENSG00000065609	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.2e	L1	L1	L1FLnI	chr6	83627357	83637409	-	noncoding	SNAP91	protein_coding	SENSE	ENSG00000065609	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr6:83635243-83635246
L1FLnI_6q14.2f	L1	L1	L1FLnI	chr6	83627748	83637409	-	noncoding	SNAP91	protein_coding	SENSE	ENSG00000065609	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr6:83635243-83635246
L1FLnI_6q14.2g	L1	L1	L1FLnI	chr6	83737353	83747953	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL139232.1	ENSG00000287705	104359	AL136972.1	ENSG00000237874	828	None	None
L1FLnI_6q14.2h	L1	L1	L1FLnI	chr6	83797244	83807270	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL139232.1	ENSG00000287705	45042	AL136972.1	ENSG00000237874	60719	None	None
L1FLnI_6q14.2i	L1	L1	L1FLnI	chr6	83896413	83905177	-	coding	CYB5R4	protein_coding	ANTISENSE	ENSG00000065615	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.2j	L1	L1	L1FLnI	chr6	83938681	83949014	+	noncoding	CYB5R4	protein_coding	SENSE	ENSG00000065615	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.2k	L1	L1	L1FLnI	chr6	84068470	84077112	-	noncoding	MRAP2	protein_coding	ANTISENSE	ENSG00000135324	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.2l	L1	L1	L1FLnI	chr6	84109104	84119533	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CEP162	ENSG00000135315	4708	MRAP2	ENSG00000135324	18223	None	None
L1FLnI_6q14.3a	L1	L1	L1FLnI	chr6	84336265	84345208	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01611	ENSG00000231776	75820	CEP162	ENSG00000135315	108622	None	chr6:84340666-84340678,chr6:84340687-84340699
L1FLnI_6q14.3b	L1	L1	L1FLnI	chr6	84364066	84373091	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01611	ENSG00000231776	47937	CEP162	ENSG00000135315	136423	None	None
L1FLnI_6q14.3c	L1	L1	L1FLnI	chr6	84475138	84485710	+	noncoding	LINC01611	lncRNA	ANTISENSE	ENSG00000231776	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.3d	L1	L1	L1FLnI	chr6	84604938	84614963	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01611	ENSG00000231776	48786	TBX18	ENSG00000112837	72388	None	None
L1FLnI_6q14.3e	L1	L1	L1FLnI	chr6	84622857	84632866	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01611	ENSG00000231776	66705	TBX18	ENSG00000112837	54485	chr6:84624283-84624583	None
L1FLnI_6q14.3f	L1	L1	L1FLnI	chr6	84695839	84705992	+	noncoding	TBX18,TBX18-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000112837,ENSG00000228290	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.3g	L1	L1	L1FLnI	chr6	84817105	84826509	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL109941.1	ENSG00000216523	139888	AL035694.1	ENSG00000287294	46886	None	None
L1FLnI_6q14.3h	L1	L1	L1FLnI	chr6	84825931	84836062	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL109941.1	ENSG00000216523	130335	AL035694.1	ENSG00000287294	55712	None	None
L1FLnI_6q14.3i	L1	L1	L1FLnI	chr6	84932432	84942632	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL035694.1	ENSG00000287294	162213	AL109941.1	ENSG00000216523	23765	None	None
L1FLnI_6q14.3j	L1	L1	L1FLnI	chr6	84977966	84986517	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL109941.1	ENSG00000216523	11341	AL139806.1	ENSG00000220291	169150	None	None
L1FLnI_6q14.3k	L1	L1	L1FLnI	chr6	85198505	85208619	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL139806.1	ENSG00000220291	30756	AL122016.1	ENSG00000216902	48709	None	None
L1FLnI_6q14.3l	L1	L1	L1FLnI	chr6	85208240	85217137	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL122016.1	ENSG00000216902	40191	AL139806.1	ENSG00000220291	40491	None	None
L1FLnI_6q14.3m	L1	L1	L1FLnI	chr6	85301731	85310540	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02535	ENSG00000234155	76679	AL135903.1	ENSG00000217060	10882	None	None
L1FLnI_6q14.3n	L1	L1	L1FLnI	chr6	85303547	85313701	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL135903.1	ENSG00000217060	12698	LINC02535	ENSG00000234155	73518	None	None
L1FLnI_6q14.3o	L1	L1	L1FLnI	chr6	85694301	85704383	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL355615.2	ENSG00000217334	26988	SNHG5	ENSG00000203875	15369	None	None
L1FLnI_6q14.3p	L1	L1	L1FLnI	chr6	85756815	85766211	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL355615.1	ENSG00000200427	11428	RNU4-72P	ENSG00000222686	5062	None	None
L1FLnI_6q14.3q	L1	L1	L1FLnI	chr6	85782337	85791728	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450338.1	ENSG00000218766	77225	AL355615.1	ENSG00000200427	4582	None	None
L1FLnI_6q14.3r	L1	L1	L1FLnI	chr6	85812447	85822583	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL355615.1	ENSG00000200427	34692	AL450338.1	ENSG00000218766	46370	None	None
L1FLnI_6q14.3s	L1	L1	L1FLnI	chr6	85828879	85839017	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL450338.1	ENSG00000218766	29936	AL355615.1	ENSG00000200427	51124	None	None
L1FLnI_6q14.3t	L1	L1	L1FLnI	chr6	85840947	85851094	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL450338.1	ENSG00000218766	17859	AL355615.1	ENSG00000200427	63192	None	None
L1FLnI_6q14.3u	L1	L1	L1FLnI	chr6	85840979	85851094	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL450338.1	ENSG00000218766	17859	AL355615.1	ENSG00000200427	63224	None	None
L1FLnI_6q14.3v	L1	L1	L1FLnI	chr6	85847394	85857866	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL450338.1	ENSG00000218766	11087	AL355615.1	ENSG00000200427	69639	None	None
L1FLnI_6q14.3w	L1	L1	L1FLnI	chr6	85856795	85866937	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL450338.1	ENSG00000218766	2016	AL355615.1	ENSG00000200427	79040	None	None
L1FLnI_6q14.3x	L1	L1	L1FLnI	chr6	85872434	85882867	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450338.2	ENSG00000288021	66823	AL450338.1	ENSG00000218766	2970	None	None
L1FLnI_6q14.3y	L1	L1	L1FLnI	chr6	85902537	85912664	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL450338.2	ENSG00000288021	37026	AL450338.1	ENSG00000218766	33073	None	None
L1FLnI_6q14.3z	L1	L1	L1FLnI	chr6	85930261	85940089	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL450338.2	ENSG00000288021	9601	AL450338.1	ENSG00000218766	60797	None	None
L1FLnI_6q14.3aa	L1	L1	L1FLnI	chr6	85952406	85962550	-	coding	AL450338.2	lncRNA	ANTISENSE	ENSG00000288021	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.3ba	L1	L1	L1FLnI	chr6	85998548	86008573	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P27	ENSG00000220069	77842	AL450338.2	ENSG00000288021	285	None	None
L1FLnI_6q14.3ca	L1	L1	L1FLnI	chr6	86020990	86031015	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P27	ENSG00000220069	55400	AL450338.2	ENSG00000288021	22727	None	None
L1FLnI_6q14.3da	L1	L1	L1FLnI	chr6	86051317	86061459	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P27	ENSG00000220069	24956	AL450338.2	ENSG00000288021	53054	None	None
L1FLnI_6q14.3ea	L1	L1	L1FLnI	chr6	86059320	86069751	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P27	ENSG00000220069	16664	AL450338.2	ENSG00000288021	61057	None	None
L1FLnI_6q14.3fa	L1	L1	L1FLnI	chr6	86074325	86084705	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P27	ENSG00000220069	1710	AL450338.2	ENSG00000288021	76062	None	None
L1FLnI_6q14.3ga	L1	L1	L1FLnI	chr6	86177677	86188226	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFA5P9	ENSG00000220831	26011	AL049545.1	ENSG00000217272	6659	None	None
L1FLnI_6q14.3ha	L1	L1	L1FLnI	chr6	86232719	86243658	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFA5P9	ENSG00000220831	18143	AL391417.1	ENSG00000219500	188586	None	None
L1FLnI_6q14.3ia	L1	L1	L1FLnI	chr6	86266039	86276153	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL391417.1	ENSG00000219500	156091	NDUFA5P9	ENSG00000220831	51463	None	None
L1FLnI_6q14.3ja	L1	L1	L1FLnI	chr6	86277660	86287501	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL391417.1	ENSG00000219500	144743	NDUFA5P9	ENSG00000220831	63084	None	None
L1FLnI_6q14.3ka	L1	L1	L1FLnI	chr6	86336049	86346184	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFA5P9	ENSG00000220831	121473	AL391417.1	ENSG00000219500	86060	None	None
L1FLnI_6q14.3la	L1	L1	L1FLnI	chr6	86389105	86399230	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFA5P9	ENSG00000220831	174529	AL391417.1	ENSG00000219500	33014	None	None
L1FLnI_6q14.3ma	L1	L1	L1FLnI	chr6	86491623	86501754	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353133.1	ENSG00000218561	227954	RN7SL643P	ENSG00000243124	55485	None	None
L1FLnI_6q14.3na	L1	L1	L1FLnI	chr6	86566075	86576220	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL643P	ENSG00000243124	129937	AL353133.1	ENSG00000218561	153488	None	None
L1FLnI_6q14.3oa	L1	L1	L1FLnI	chr6	86664710	86674738	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL353133.1	ENSG00000218561	54970	RN7SL643P	ENSG00000243124	228572	None	None
L1FLnI_6q14.3pa	L1	L1	L1FLnI	chr6	86688890	86699021	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL353133.1	ENSG00000218561	30687	RN7SL643P	ENSG00000243124	252752	None	None
L1FLnI_6q14.3qa	L1	L1	L1FLnI	chr6	86727898	86737736	+	coding	AL353133.1	processed_pseudogene	ANTISENSE	ENSG00000218561	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q14.3ra	L1	L1	L1FLnI	chr6	86806165	86816182	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL157777.1	ENSG00000217769	80936	AL353133.2	ENSG00000219190	37233	None	None
L1FLnI_6q14.3sa	L1	L1	L1FLnI	chr6	86863569	86873326	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL353133.2	ENSG00000219190	94637	AL157777.1	ENSG00000217769	23792	None	None
L1FLnI_6q14.3ta	L1	L1	L1FLnI	chr6	86880423	86888955	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL157777.1	ENSG00000217769	8163	AL353133.2	ENSG00000219190	111491	None	None
L1FLnI_6q14.3ua	L1	L1	L1FLnI	chr6	86917667	86927817	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL157777.2	ENSG00000220240	19984	HTR1E	ENSG00000168830	9711	None	None
L1FLnI_6q14.3va	L1	L1	L1FLnI	chr6	87033753	87042834	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL138827.1	ENSG00000217776	27322	HTR1E	ENSG00000168830	17074	None	None
L1FLnI_6q14.3wa	L1	L1	L1FLnI	chr6	87136187	87146258	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RCN1P1	ENSG00000215477	13499	AL139274.2	ENSG00000272008	4901	None	None
L1FLnI_6q14.3xa	L1	L1	L1FLnI	chr6	87297546	87307691	+	coding	GJB7,HSPD1P10	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000164411,ENSG00000216990	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr6:87298708-87298716
L1FLnI_6q15a	L1	L1	L1FLnI	chr6	87322780	87332778	-	coding	GJB7,SMIM8	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000164411,ENSG00000111850	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q15b	L1	L1	L1FLnI	chr6	88250122	88260273	+	coding	AL139042.1	lncRNA	ANTISENSE	ENSG00000234426	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q15c	L1	L1	L1FLnI	chr6	88387229	88397376	+	noncoding	AL139042.1	lncRNA	ANTISENSE	ENSG00000234426	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q15d	L1	L1	L1FLnI	chr6	88403000	88413030	+	coding	AL139042.1	lncRNA	ANTISENSE	ENSG00000234426	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q15e	L1	L1	L1FLnI	chr6	88520709	88530851	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNGTT	ENSG00000111880	79046	AL139042.1	ENSG00000234426	77781	None	None
L1FLnI_6q15f	L1	L1	L1FLnI	chr6	88823596	88834078	+	noncoding	RNGTT	protein_coding	ANTISENSE	ENSG00000111880	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q15g	L1	L1	L1FLnI	chr6	89224765	89234787	-	coding	GABRR1	protein_coding	SENSE	ENSG00000146276	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q15h	L1	L1	L1FLnI	chr6	90050483	90060641	+	coding	BACH2	protein_coding	ANTISENSE	ENSG00000112182	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q15i	L1	L1	L1FLnI	chr6	90558610	90568720	+	coding	MAP3K7	protein_coding	ANTISENSE	ENSG00000135341	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q15j	L1	L1	L1FLnI	chr6	90619319	90628250	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MAP3K7	ENSG00000135341	32247	AL080284.1	ENSG00000224605	762063	None	None
L1FLnI_6q15k	L1	L1	L1FLnI	chr6	90733246	90743707	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL080284.1	ENSG00000224605	646606	MAP3K7	ENSG00000135341	146174	None	None
L1FLnI_6q15l	L1	L1	L1FLnI	chr6	90880018	90889830	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL080284.1	ENSG00000224605	500483	MAP3K7	ENSG00000135341	292946	None	None
L1FLnI_6q15m	L1	L1	L1FLnI	chr6	90880683	90889830	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL080284.1	ENSG00000224605	500483	MAP3K7	ENSG00000135341	293611	None	None
L1FLnI_6q15n	L1	L1	L1FLnI	chr6	91046653	91056661	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL080284.1	ENSG00000224605	333652	MAP3K7	ENSG00000135341	459581	None	None
L1FLnI_6q15o	L1	L1	L1FLnI	chr6	91185778	91194841	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL080284.1	ENSG00000224605	195472	MAP3K7	ENSG00000135341	598706	None	None
L1FLnI_6q15p	L1	L1	L1FLnI	chr6	92074788	92084943	+	noncoding	AL590814.2	lncRNA	ANTISENSE	ENSG00000285961	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q15q	L1	L1	L1FLnI	chr6	92188917	92198418	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133457.1	ENSG00000261038	189423	AL590814.2	ENSG00000285961	8761	chr6:92197963-92198144	None
L1FLnI_6q15r	L1	L1	L1FLnI	chr6	92483443	92492841	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359987.1	ENSG00000288101	138225	AL133457.1	ENSG00000261038	94616	None	None
L1FLnI_6q15s	L1	L1	L1FLnI	chr6	92483759	92492841	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359987.1	ENSG00000288101	138225	AL133457.1	ENSG00000261038	94932	None	None
L1FLnI_6q16.1a	L1	L1	L1FLnI	chr6	92612133	92621550	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359987.1	ENSG00000288101	9516	AL133457.1	ENSG00000261038	223306	None	None
L1FLnI_6q16.1b	L1	L1	L1FLnI	chr6	92650659	92659707	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02531	ENSG00000220908	63296	AL359987.1	ENSG00000288101	17391	None	None
L1FLnI_6q16.1c	L1	L1	L1FLnI	chr6	92748199	92758472	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589947.1	ENSG00000221455	31981	LINC02531	ENSG00000220908	24370	None	None
L1FLnI_6q16.1d	L1	L1	L1FLnI	chr6	92877106	92886716	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589947.1	ENSG00000221455	86441	ATF1P1	ENSG00000219387	535	None	None
L1FLnI_6q16.1e	L1	L1	L1FLnI	chr6	92948374	92958515	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ATF1P1	ENSG00000219387	59793	AL138731.1	ENSG00000235099	111872	None	None
L1FLnI_6q16.1f	L1	L1	L1FLnI	chr6	92991684	93001814	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ATF1P1	ENSG00000219387	103103	AL138731.1	ENSG00000235099	68573	None	None
L1FLnI_6q16.1g	L1	L1	L1FLnI	chr6	93631090	93641109	-	coding	AL591519.1	lncRNA	ANTISENSE	ENSG00000287683	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q16.1h	L1	L1	L1FLnI	chr6	93865254	93875283	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL391336.2	ENSG00000252249	3823	AL356094.1	ENSG00000280451	52218	None	chr6:93873259-93873261
L1FLnI_6q16.1i	L1	L1	L1FLnI	chr6	94197497	94207560	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL078595.1	ENSG00000220370	137177	AL157378.1	ENSG00000231143	2839	None	None
L1FLnI_6q16.1j	L1	L1	L1FLnI	chr6	94197528	94207560	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL078595.1	ENSG00000220370	137177	AL157378.1	ENSG00000231143	2870	None	None
L1FLnI_6q16.1k	L1	L1	L1FLnI	chr6	94324113	94335438	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL157378.1	ENSG00000231143	129455	AL078595.1	ENSG00000220370	9299	None	None
L1FLnI_6q16.1l	L1	L1	L1FLnI	chr6	94507759	94518186	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCYBP36	ENSG00000216853	60580	CYCSP17	ENSG00000219627	985996	None	None
L1FLnI_6q16.1m	L1	L1	L1FLnI	chr6	94605010	94614603	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCYBP36	ENSG00000216853	157831	CYCSP17	ENSG00000219627	889579	None	None
L1FLnI_6q16.1n	L1	L1	L1FLnI	chr6	94731754	94743177	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCYBP36	ENSG00000216853	284575	CYCSP17	ENSG00000219627	761005	None	chr6:94735845-94735858,chr6:94735919-94735957
L1FLnI_6q16.1o	L1	L1	L1FLnI	chr6	94731754	94740427	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCYBP36	ENSG00000216853	284575	CYCSP17	ENSG00000219627	763755	None	chr6:94735845-94735858,chr6:94735919-94735957
L1FLnI_6q16.1p	L1	L1	L1FLnI	chr6	94754270	94764415	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTCYBP36	ENSG00000216853	307091	CYCSP17	ENSG00000219627	739767	None	None
L1FLnI_6q16.1q	L1	L1	L1FLnI	chr6	94778935	94789396	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYCSP17	ENSG00000219627	714786	MTCYBP36	ENSG00000216853	331756	None	None
L1FLnI_6q16.1r	L1	L1	L1FLnI	chr6	94820665	94830807	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTCYBP36	ENSG00000216853	373486	CYCSP17	ENSG00000219627	673375	None	None
L1FLnI_6q16.1s	L1	L1	L1FLnI	chr6	94847631	94857658	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTCYBP36	ENSG00000216853	400452	CYCSP17	ENSG00000219627	646524	None	None
L1FLnI_6q16.1t	L1	L1	L1FLnI	chr6	94868541	94877943	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CYCSP17	ENSG00000219627	626239	MTCYBP36	ENSG00000216853	421362	None	None
L1FLnI_6q16.1u	L1	L1	L1FLnI	chr6	94938636	94948659	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTCYBP36	ENSG00000216853	491457	CYCSP17	ENSG00000219627	555523	None	None
L1FLnI_6q16.1v	L1	L1	L1FLnI	chr6	95467938	95478084	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTCYBP36	ENSG00000216853	1020759	CYCSP17	ENSG00000219627	26098	None	None
L1FLnI_6q16.1w	L1	L1	L1FLnI	chr6	95754888	95764912	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL607077.1	ENSG00000219549	121959	AL034348.1	ENSG00000287578	152231	None	None
L1FLnI_6q16.1x	L1	L1	L1FLnI	chr6	96282971	96294615	+	noncoding	UFL1-AS1	lncRNA	ANTISENSE	ENSG00000233797	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:96286452-96286651	None
L1FLnI_6q16.1y	L1	L1	L1FLnI	chr6	96285244	96294615	+	noncoding	UFL1-AS1	lncRNA	ANTISENSE	ENSG00000233797	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:96286452-96286651	None
L1FLnI_6q16.1z	L1	L1	L1FLnI	chr6	96434699	96443264	+	coding	UFL1-AS1	lncRNA	ANTISENSE	ENSG00000233797	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q16.1aa	L1	L1	L1FLnI	chr6	96471580	96480959	-	noncoding	UFL1-AS1	lncRNA	SENSE	ENSG00000233797	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q16.1ba	L1	L1	L1FLnI	chr6	96483264	96492640	-	noncoding	UFL1-AS1	lncRNA	SENSE	ENSG00000233797	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q16.1ca	L1	L1	L1FLnI	chr6	96493876	96503944	-	noncoding	UFL1-AS1	lncRNA	SENSE	ENSG00000233797	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q16.1da	L1	L1	L1FLnI	chr6	96565390	96576509	-	noncoding	FHL5	protein_coding	ANTISENSE	ENSG00000112214	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q16.1ea	L1	L1	L1FLnI	chr6	96634257	96643976	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FHL5	ENSG00000112214	17621	RPS7P8	ENSG00000213183	4513	None	None
L1FLnI_6q16.1fa	L1	L1	L1FLnI	chr6	96634257	96644005	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FHL5	ENSG00000112214	17621	RPS7P8	ENSG00000213183	4484	None	None
L1FLnI_6q16.1ga	L1	L1	L1FLnI	chr6	97001965	97012418	-	noncoding	KLHL32	protein_coding	ANTISENSE	ENSG00000186231	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr6:97010193-97010207
L1FLnI_6q16.1ha	L1	L1	L1FLnI	chr6	97376040	97386207	-	coding	AL589740.1	lncRNA	ANTISENSE	ENSG00000271860	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q16.1ia	L1	L1	L1FLnI	chr6	97414432	97426362	-	noncoding	AL589740.1	lncRNA	ANTISENSE	ENSG00000271860	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q16.1ja	L1	L1	L1FLnI	chr6	97414432	97426254	-	noncoding	AL589740.1	lncRNA	ANTISENSE	ENSG00000271860	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q16.1ka	L1	L1	L1FLnI	chr6	97791145	97801032	+	noncoding	AL589740.1	lncRNA	SENSE	ENSG00000271860	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q16.1la	L1	L1	L1FLnI	chr6	98082537	98092705	-	coding	AL589740.1	lncRNA	ANTISENSE	ENSG00000271860	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q16.1ma	L1	L1	L1FLnI	chr6	98413004	98423022	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL589740.1	ENSG00000271860	12135	AL589826.1	ENSG00000187472	357235	None	None
L1FLnI_6q16.1na	L1	L1	L1FLnI	chr6	98413004	98423016	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL589740.1	ENSG00000271860	12135	AL589826.1	ENSG00000187472	357241	None	None
L1FLnI_6q16.1oa	L1	L1	L1FLnI	chr6	98699561	98708829	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL589740.1	ENSG00000271860	298692	AL589826.1	ENSG00000187472	71428	None	None
L1FLnI_6q16.2a	L1	L1	L1FLnI	chr6	98907189	98917328	+	coding	FBXL4	protein_coding	ANTISENSE	ENSG00000112234	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q16.2b	L1	L1	L1FLnI	chr6	99197932	99207342	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	FAXC	ENSG00000146267	63826	BDH2P1	ENSG00000232699	22453	None	None
L1FLnI_6q16.2c	L1	L1	L1FLnI	chr6	99200783	99210936	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	BDH2P1	ENSG00000232699	25304	FAXC	ENSG00000146267	60232	None	None
L1FLnI_6q16.2d	L1	L1	L1FLnI	chr6	99444026	99453686	+	coding	USP45	protein_coding	ANTISENSE	ENSG00000123552	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q16.2e	L1	L1	L1FLnI	chr6	99670305	99680439	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MCHR2	ENSG00000152034	238080	AL035087.1	ENSG00000199303	27958	None	None
L1FLnI_6q16.2f	L1	L1	L1FLnI	chr6	99698631	99708621	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL035087.1	ENSG00000199303	56284	MCHR2	ENSG00000152034	209898	None	None
L1FLnI_6q16.2g	L1	L1	L1FLnI	chr6	99820099	99830094	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL035087.1	ENSG00000199303	177752	MCHR2	ENSG00000152034	88425	None	None
L1FLnI_6q16.2h	L1	L1	L1FLnI	chr6	99925338	99935490	-	coding	MCHR2	protein_coding	SENSE	ENSG00000152034	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q16.2i	L1	L1	L1FLnI	chr6	99934576	99944936	-	noncoding	MCHR2	protein_coding	SENSE	ENSG00000152034	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr6:99941245-99941258	None
L1FLnI_6q16.2j	L1	L1	L1FLnI	chr6	99969078	99979217	-	coding	MCHR2	protein_coding	SENSE	ENSG00000152034	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q16.3a	L1	L1	L1FLnI	chr6	100192963	100202990	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL080285.1	ENSG00000216378	14771	SIM1	ENSG00000112246	182025	None	chr6:100194605-100194644,chr6:100196846-100196848
L1FLnI_6q16.3b	L1	L1	L1FLnI	chr6	100351205	100361225	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL080285.1	ENSG00000216378	173013	SIM1	ENSG00000112246	23790	None	None
L1FLnI_6q16.3c	L1	L1	L1FLnI	chr6	100580088	100590236	-	coding	ASCC3	protein_coding	SENSE	ENSG00000112249	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q16.3d	L1	L1	L1FLnI	chr6	100580101	100590236	-	coding	ASCC3	protein_coding	SENSE	ENSG00000112249	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q16.3e	L1	L1	L1FLnI	chr6	100736735	100746883	-	noncoding	ASCC3	protein_coding	SENSE	ENSG00000112249	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q16.3f	L1	L1	L1FLnI	chr6	100907627	100917767	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GRIK2	ENSG00000164418	263490	AL133338.2	ENSG00000270987	17289	None	None
L1FLnI_6q16.3g	L1	L1	L1FLnI	chr6	101048009	101058105	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRIK2	ENSG00000164418	123152	AL133338.2	ENSG00000270987	157671	None	None
L1FLnI_6q16.3h	L1	L1	L1FLnI	chr6	101087184	101096352	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRIK2	ENSG00000164418	84905	AL133338.2	ENSG00000270987	196846	None	None
L1FLnI_6q16.3i	L1	L1	L1FLnI	chr6	101151754	101161769	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GRIK2	ENSG00000164418	19488	AL133338.2	ENSG00000270987	261416	None	None
L1FLnI_6q16.3j	L1	L1	L1FLnI	chr6	101184662	101194582	+	coding	GRIK2	protein_coding	SENSE	ENSG00000164418	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q16.3k	L1	L1	L1FLnI	chr6	101787711	101797861	-	coding	GRIK2	protein_coding	ANTISENSE	ENSG00000164418	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q16.3l	L1	L1	L1FLnI	chr6	102084699	102094726	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP002530.1	ENSG00000218536	5144	AL357139.2	ENSG00000287499	255545	None	None
L1FLnI_6q16.3m	L1	L1	L1FLnI	chr6	102149602	102161302	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002530.1	ENSG00000218536	70047	AL357139.2	ENSG00000287499	188969	None	None
L1FLnI_6q16.3n	L1	L1	L1FLnI	chr6	102152393	102161302	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002530.1	ENSG00000218536	72838	AL357139.2	ENSG00000287499	188969	None	None
L1FLnI_6q16.3o	L1	L1	L1FLnI	chr6	102166368	102176196	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP002530.1	ENSG00000218536	86813	AL357139.2	ENSG00000287499	174075	None	None
L1FLnI_6q16.3p	L1	L1	L1FLnI	chr6	102658149	102666883	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357139.1	ENSG00000219757	204357	Z98755.1	ENSG00000217120	335631	chr6:102660010-102660083	None
L1FLnI_6q16.3q	L1	L1	L1FLnI	chr6	102694021	102702829	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z98755.1	ENSG00000217120	299685	AL357139.1	ENSG00000219757	240229	None	None
L1FLnI_6q16.3r	L1	L1	L1FLnI	chr6	102752391	102762407	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	Z98755.1	ENSG00000217120	240107	AL357139.1	ENSG00000219757	298599	None	None
L1FLnI_6q16.3s	L1	L1	L1FLnI	chr6	102802922	102813084	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	Z98755.1	ENSG00000217120	189430	AL357139.1	ENSG00000219757	349130	None	None
L1FLnI_6q16.3t	L1	L1	L1FLnI	chr6	102936510	102945350	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z98755.1	ENSG00000217120	57164	AL357139.1	ENSG00000219757	482718	None	None
L1FLnI_6q16.3u	L1	L1	L1FLnI	chr6	102970211	102979977	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357139.1	ENSG00000219757	516419	Z98755.1	ENSG00000217120	22537	None	None
L1FLnI_6q16.3v	L1	L1	L1FLnI	chr6	103000143	103009526	+	coding	Z98755.1	processed_pseudogene	SENSE	ENSG00000217120	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q16.3w	L1	L1	L1FLnI	chr6	103012010	103022455	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591387.1	ENSG00000202283	560680	Z98755.1	ENSG00000217120	8113	None	None
L1FLnI_6q16.3x	L1	L1	L1FLnI	chr6	103244724	103253775	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z98755.1	ENSG00000217120	240827	AL591387.1	ENSG00000202283	329360	None	None
L1FLnI_6q16.3y	L1	L1	L1FLnI	chr6	103490669	103500688	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL591387.1	ENSG00000202283	82447	Z98755.1	ENSG00000217120	486772	None	None
L1FLnI_6q16.3z	L1	L1	L1FLnI	chr6	103518062	103528225	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z98755.1	ENSG00000217120	514165	AL591387.1	ENSG00000202283	54910	None	None
L1FLnI_6q16.3aa	L1	L1	L1FLnI	chr6	103518485	103528225	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z98755.1	ENSG00000217120	514588	AL591387.1	ENSG00000202283	54910	None	None
L1FLnI_6q16.3ba	L1	L1	L1FLnI	chr6	103705533	103715556	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL591387.1	ENSG00000202283	122265	AL590608.1	ENSG00000288084	150467	None	None
L1FLnI_6q16.3ca	L1	L1	L1FLnI	chr6	103732133	103740935	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL591387.1	ENSG00000202283	148865	AL590608.1	ENSG00000288084	125088	None	None
L1FLnI_6q16.3da	L1	L1	L1FLnI	chr6	103798344	103808499	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591387.1	ENSG00000202283	215076	AL590608.1	ENSG00000288084	57524	None	None
L1FLnI_6q16.3ea	L1	L1	L1FLnI	chr6	103815908	103827088	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591387.1	ENSG00000202283	232640	AL590608.1	ENSG00000288084	38935	None	None
L1FLnI_6q16.3fa	L1	L1	L1FLnI	chr6	104239151	104247840	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPM1P10	ENSG00000214428	212388	AL357522.1	ENSG00000287616	239255	None	None
L1FLnI_6q16.3ga	L1	L1	L1FLnI	chr6	104371109	104381255	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NPM1P10	ENSG00000214428	344346	AL357522.1	ENSG00000287616	105840	None	None
L1FLnI_6q16.3ha	L1	L1	L1FLnI	chr6	104377392	104387705	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NPM1P10	ENSG00000214428	350629	AL357522.1	ENSG00000287616	99390	None	None
L1FLnI_6q16.3ia	L1	L1	L1FLnI	chr6	104377392	104387694	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NPM1P10	ENSG00000214428	350629	AL357522.1	ENSG00000287616	99401	None	None
L1ORF2_6q16.3	L1	L1	L1ORF2	chr6	104450426	104458481	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NPM1P10	ENSG00000214428	423663	AL357522.1	ENSG00000287616	28614	None	chr6:104450592-104450594,chr6:104457594-104457622
L1FLI_6q16.3	L1	L1	L1FLI	chr6	104488392	104496438	+	coding	AL357522.1	lncRNA	ANTISENSE	ENSG00000287616	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q16.3ja	L1	L1	L1FLnI	chr6	104655115	104665844	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357522.1	ENSG00000287616	126957	AL356967.1	ENSG00000218173	21397	chr6:104656399-104656621	chr6:104656422-104656435
L1FLnI_6q16.3ka	L1	L1	L1FLnI	chr6	104667289	104677713	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357522.1	ENSG00000287616	139131	AL356967.1	ENSG00000218173	9528	None	None
L1FLnI_6q16.3la	L1	L1	L1FLnI	chr6	104733817	104743824	+	coding	HACE1	protein_coding	ANTISENSE	ENSG00000085382	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q16.3ma	L1	L1	L1FLnI	chr6	104753076	104763208	+	noncoding	HACE1	protein_coding	ANTISENSE	ENSG00000085382	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q16.3na	L1	L1	L1FLnI	chr6	104796262	104806372	+	noncoding	HACE1	protein_coding	ANTISENSE	ENSG00000085382	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q21a	L1	L1	L1FLnI	chr6	105240876	105251020	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	POPDC3	ENSG00000132429	60862	PREP	ENSG00000085377	22200	None	None
L1FLnI_6q21b	L1	L1	L1FLnI	chr6	105334925	105344708	+	noncoding	PREP	protein_coding	ANTISENSE	ENSG00000085377	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q21c	L1	L1	L1FLnI	chr6	105411513	105421654	+	noncoding	PREP,AL096794.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000085377,ENSG00000286084	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_6q21a	L1	L1	L1ORF2	chr6	105715122	105723294	+	coding	AL591518.1	lncRNA	ANTISENSE	ENSG00000284999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q21d	L1	L1	L1FLnI	chr6	106259065	106269555	+	noncoding	ATG5	protein_coding	ANTISENSE	ENSG00000057663	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q21e	L1	L1	L1FLnI	chr6	106401082	106411523	+	noncoding	CRYBG1	protein_coding	SENSE	ENSG00000112297	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_6q21b	L1	L1	L1ORF2	chr6	107853703	107861757	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SEC63	ENSG00000025796	5999	SCML4	ENSG00000146285	29386	None	None
L1FLnI_6q21f	L1	L1	L1FLnI	chr6	107887261	107895787	-	coding	SEC63	protein_coding	SENSE	ENSG00000025796	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q21g	L1	L1	L1FLnI	chr6	108407317	108417435	+	coding	AFG1L	protein_coding	SENSE	ENSG00000135537	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q21h	L1	L1	L1FLnI	chr6	108974508	108984294	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SESN1	ENSG00000080546	2143	ARMC2	ENSG00000118690	32	None	None
L1FLnI_6q21i	L1	L1	L1FLnI	chr6	109244720	109254751	-	coding	CCDC162P	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000203799	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q21j	L1	L1	L1FLnI	chr6	109534106	109544228	-	coding	AK9	protein_coding	SENSE	ENSG00000155085	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q21k	L1	L1	L1FLnI	chr6	109597588	109607710	-	coding	AK9	protein_coding	SENSE	ENSG00000155085	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q21l	L1	L1	L1FLnI	chr6	109641589	109651736	+	coding	AK9	protein_coding	ANTISENSE	ENSG00000155085	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q21m	L1	L1	L1FLnI	chr6	110112563	110122697	+	noncoding	WASF1	protein_coding	ANTISENSE	ENSG00000112290	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q21n	L1	L1	L1FLnI	chr6	110255505	110265632	+	coding	METTL24	protein_coding	ANTISENSE	ENSG00000053328	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q21o	L1	L1	L1FLnI	chr6	110255505	110265621	+	coding	METTL24	protein_coding	ANTISENSE	ENSG00000053328	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q21p	L1	L1	L1FLnI	chr6	110374785	110385399	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	METTL24	ENSG00000053328	16513	DDO	ENSG00000203797	6372	None	None
L1FLnI_6q21q	L1	L1	L1FLnI	chr6	110458748	110467419	+	noncoding	SLC22A16	protein_coding	ANTISENSE	ENSG00000004809	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q21r	L1	L1	L1FLnI	chr6	110458748	110467411	+	noncoding	SLC22A16	protein_coding	ANTISENSE	ENSG00000004809	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q21s	L1	L1	L1FLnI	chr6	110900844	110910570	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AMD1	ENSG00000123505	1965	AL357515.1	ENSG00000219329	12996	None	None
L1FLnI_6q21t	L1	L1	L1FLnI	chr6	111902503	111912520	-	coding	LINC02527	lncRNA	SENSE	ENSG00000227012	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q21u	L1	L1	L1FLnI	chr6	111928536	111938922	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCN6	ENSG00000112761	115150	LINC02527	ENSG00000227012	19116	None	None
L1FLnI_6q21v	L1	L1	L1FLnI	chr6	112417603	112427017	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL365214.3	ENSG00000286914	21239	AL357514.1	ENSG00000232299	49521	None	None
L1FLnI_6q21w	L1	L1	L1FLnI	chr6	112537450	112546567	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL357514.1	ENSG00000232299	55814	AL358942.1	ENSG00000225580	70136	None	None
L1FLnI_6q21x	L1	L1	L1FLnI	chr6	112700247	112710278	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL358942.1	ENSG00000225580	82367	AL360085.1	ENSG00000271498	115661	None	None
L1FLnI_6q21y	L1	L1	L1FLnI	chr6	112790527	112799207	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL360085.1	ENSG00000271498	26732	AL358942.1	ENSG00000225580	172647	None	None
L1FLnI_6q21z	L1	L1	L1FLnI	chr6	112809523	112819547	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL358942.1	ENSG00000225580	191643	AL360085.1	ENSG00000271498	6392	None	None
L1FLnI_6q21aa	L1	L1	L1FLnI	chr6	112913867	112923818	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1163P	ENSG00000201386	47675	AL360085.1	ENSG00000271498	87397	None	None
L1FLnI_6q21ba	L1	L1	L1FLnI	chr6	113015196	113025596	+	noncoding	AL360015.1	lncRNA	SENSE	ENSG00000288560	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:113015340-113015429	None
L1FLnI_6q21ca	L1	L1	L1FLnI	chr6	113110332	113119748	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL360015.1	ENSG00000288560	25878	AL049695.1	ENSG00000287728	9959	None	chr6:113111983-113111986
L1FLnI_6q21da	L1	L1	L1FLnI	chr6	113222989	113233015	+	coding	SOCS5P5	processed_pseudogene	SENSE	ENSG00000216904	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q21ea	L1	L1	L1FLnI	chr6	113244589	113255236	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SOCS5P5	ENSG00000216904	20517	AL589684.1	ENSG00000223811	101767	None	None
L1FLnI_6q21fa	L1	L1	L1FLnI	chr6	113527619	113537647	+	coding	AL513123.1	lncRNA	SENSE	ENSG00000236347	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.1a	L1	L1	L1FLnI	chr6	114528872	114538944	-	noncoding	AL138830.1	lncRNA	SENSE	ENSG00000226079	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.1b	L1	L1	L1FLnI	chr6	114627522	114637615	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590550.1	ENSG00000287097	185379	AL138830.1	ENSG00000226079	82187	None	None
L1FLnI_6q22.1c	L1	L1	L1FLnI	chr6	114720224	114730252	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590550.1	ENSG00000287097	92742	AL138830.1	ENSG00000226079	174889	None	None
L1FLnI_6q22.1d	L1	L1	L1FLnI	chr6	114799409	114809549	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590550.1	ENSG00000287097	13445	AL138830.1	ENSG00000226079	254074	None	None
L1FLnI_6q22.1e	L1	L1	L1FLnI	chr6	114922683	114932841	-	noncoding	AL590550.1	lncRNA	ANTISENSE	ENSG00000287097	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.1f	L1	L1	L1FLnI	chr6	114969877	114979901	-	coding	AL590550.1	lncRNA	ANTISENSE	ENSG00000287097	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.1g	L1	L1	L1FLnI	chr6	114969888	114979901	-	coding	AL590550.1	lncRNA	ANTISENSE	ENSG00000287097	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.1h	L1	L1	L1FLnI	chr6	115005568	115014975	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590550.1	ENSG00000287097	3288	AL606845.1	ENSG00000219619	343523	None	None
L1FLnI_6q22.1i	L1	L1	L1FLnI	chr6	115078411	115087235	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590550.1	ENSG00000287097	76131	AL606845.1	ENSG00000219619	271263	None	None
L1FLnI_6q22.1j	L1	L1	L1FLnI	chr6	115078411	115087221	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590550.1	ENSG00000287097	76131	AL606845.1	ENSG00000219619	271277	None	None
L1FLnI_6q22.1k	L1	L1	L1FLnI	chr6	115150033	115160528	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL606845.1	ENSG00000219619	197970	AL590550.1	ENSG00000287097	147753	None	None
L1FLnI_6q22.1l	L1	L1	L1FLnI	chr6	115160177	115169880	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL606845.1	ENSG00000219619	188618	AL590550.1	ENSG00000287097	157897	None	None
L1FLnI_6q22.1m	L1	L1	L1FLnI	chr6	115171729	115181728	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590550.1	ENSG00000287097	169449	AL606845.1	ENSG00000219619	176770	None	None
L1FLnI_6q22.1n	L1	L1	L1FLnI	chr6	115218583	115228719	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590550.1	ENSG00000287097	216303	AL606845.1	ENSG00000219619	129779	None	None
L1FLnI_6q22.1o	L1	L1	L1FLnI	chr6	115246574	115256740	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590550.1	ENSG00000287097	244294	AL606845.1	ENSG00000219619	101758	None	None
L1FLnI_6q22.1p	L1	L1	L1FLnI	chr6	115474537	115484715	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02534	ENSG00000228777	148825	AL606845.1	ENSG00000219619	115785	None	None
L1FLnI_6q22.1q	L1	L1	L1FLnI	chr6	115512342	115522768	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL606845.1	ENSG00000219619	153590	LINC02534	ENSG00000228777	110772	None	None
L1FLnI_6q22.1r	L1	L1	L1FLnI	chr6	115541271	115551675	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL606845.1	ENSG00000219619	182519	LINC02534	ENSG00000228777	81865	None	None
L1FLnI_6q22.1s	L1	L1	L1FLnI	chr6	115722028	115731520	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FRK	ENSG00000111816	199629	LINC02534	ENSG00000228777	78112	None	None
L1FLnI_6q22.1t	L1	L1	L1FLnI	chr6	115738797	115747645	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02534	ENSG00000228777	94881	FRK	ENSG00000111816	183504	None	None
L1FLnI_6q22.1u	L1	L1	L1FLnI	chr6	115931556	115942005	+	noncoding	FRK	protein_coding	ANTISENSE	ENSG00000111816	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_6q22.1	L1	L1	L1ORF2	chr6	115959031	115967077	+	coding	FRK	protein_coding	ANTISENSE	ENSG00000111816	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.1v	L1	L1	L1FLnI	chr6	116037958	116047291	+	noncoding	FRK,AL357141.1,TPI1P3	protein_coding,lncRNA,processed_pseudogene	ANTISENSE,SENSE,SENSE	ENSG00000111816,ENSG00000287933,ENSG00000186743	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.1w	L1	L1	L1FLnI	chr6	116181378	116190817	-	noncoding	NT5DC1	protein_coding	ANTISENSE	ENSG00000178425	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.1x	L1	L1	L1FLnI	chr6	116181756	116190817	-	noncoding	NT5DC1	protein_coding	ANTISENSE	ENSG00000178425	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.1y	L1	L1	L1FLnI	chr6	116260857	116269629	-	noncoding	DSE,TSPYL1	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000111817,ENSG00000189241	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr6:116269015-116269019
L1FLnI_6q22.1z	L1	L1	L1FLnI	chr6	116339193	116348645	+	coding	DSE	protein_coding	SENSE	ENSG00000111817	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.1aa	L1	L1	L1FLnI	chr6	116497371	116507521	+	coding	TRAPPC3L	protein_coding	ANTISENSE	ENSG00000173626	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.1ba	L1	L1	L1FLnI	chr6	116497371	116507541	+	coding	TRAPPC3L	protein_coding	ANTISENSE	ENSG00000173626	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.1ca	L1	L1	L1FLnI	chr6	116635198	116645347	+	coding	ZUP1	protein_coding	ANTISENSE	ENSG00000153975	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.1da	L1	L1	L1FLnI	chr6	116635198	116645334	+	coding	ZUP1	protein_coding	ANTISENSE	ENSG00000153975	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_6q22.1	L1	L1	L1FLI	chr6	117101131	117109177	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP214	ENSG00000200248	40332	Z98880.1	ENSG00000287253	153066	None	None
L1FLnI_6q22.1ea	L1	L1	L1FLnI	chr6	117171894	117181498	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP214	ENSG00000200248	111095	Z98880.1	ENSG00000287253	80745	None	None
L1FLnI_6q22.1fa	L1	L1	L1FLnI	chr6	117178319	117188327	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP214	ENSG00000200248	117520	Z98880.1	ENSG00000287253	73916	None	None
L1FLnI_6q22.1ga	L1	L1	L1FLnI	chr6	117241254	117251283	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP214	ENSG00000200248	180455	Z98880.1	ENSG00000287253	10960	None	None
L1FLnI_6q22.1ha	L1	L1	L1FLnI	chr6	117326060	117336478	+	noncoding	ROS1,AL132671.2	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000047936,ENSG00000282218	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.1ia	L1	L1	L1FLnI	chr6	117346498	117355325	-	noncoding	ROS1,AL132671.2	protein_coding,protein_coding	SENSE,SENSE	ENSG00000047936,ENSG00000282218	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.1ja	L1	L1	L1FLnI	chr6	117641810	117652183	+	noncoding	NEPNP	unitary_pseudogene	SENSE	ENSG00000218233	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.1ka	L1	L1	L1FLnI	chr6	117692550	117701528	+	noncoding	NUS1	protein_coding	SENSE	ENSG00000153989	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.1la	L1	L1	L1FLnI	chr6	117717796	117727939	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NUS1	ENSG00000153989	7069	SLC35F1	ENSG00000196376	179325	None	None
L1FLnI_6q22.1ma	L1	L1	L1FLnI	chr6	117742234	117750871	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NUS1	ENSG00000153989	31507	SLC35F1	ENSG00000196376	156393	None	None
L1FLnI_6q22.1na	L1	L1	L1FLnI	chr6	117756252	117766212	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NUS1	ENSG00000153989	45525	SLC35F1	ENSG00000196376	141052	None	None
L1FLnI_6q22.1oa	L1	L1	L1FLnI	chr6	117798183	117807497	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC35F1	ENSG00000196376	99767	NUS1	ENSG00000153989	87456	None	None
L1FLnI_6q22.1pa	L1	L1	L1FLnI	chr6	117804592	117814941	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC35F1	ENSG00000196376	92323	NUS1	ENSG00000153989	93865	None	None
L1FLnI_6q22.31a	L1	L1	L1FLnI	chr6	118337548	118346506	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589993.1	ENSG00000216809	105963	SLC35F1	ENSG00000196376	19872	None	None
L1FLnI_6q22.31b	L1	L1	L1FLnI	chr6	118417533	118427304	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC35F1	ENSG00000196376	99857	AL589993.1	ENSG00000216809	25165	None	None
L1FLnI_6q22.31c	L1	L1	L1FLnI	chr6	118423313	118433450	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC35F1	ENSG00000196376	105637	AL589993.1	ENSG00000216809	19019	None	None
L1FLnI_6q22.31d	L1	L1	L1FLnI	chr6	118816624	118827050	-	coding	MCM9	protein_coding	SENSE	ENSG00000111877	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.31e	L1	L1	L1FLnI	chr6	119396495	119406605	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL078600.1	ENSG00000287100	4666	MIR3144	ENSG00000265725	608574	None	None
L1FLnI_6q22.31f	L1	L1	L1FLnI	chr6	119410445	119420394	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3144	ENSG00000265725	594785	AL078600.1	ENSG00000287100	18616	None	None
L1FLnI_6q22.31g	L1	L1	L1FLnI	chr6	119414174	119424579	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL078600.1	ENSG00000287100	22345	MIR3144	ENSG00000265725	590600	None	None
L1FLnI_6q22.31h	L1	L1	L1FLnI	chr6	119721213	119731846	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3144	ENSG00000265725	283333	AL078600.1	ENSG00000287100	329384	None	None
L1FLnI_6q22.31i	L1	L1	L1FLnI	chr6	120143304	120153676	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3144	ENSG00000265725	128047	AL096854.1	ENSG00000286540	308835	None	None
L1FLnI_6q22.31j	L1	L1	L1FLnI	chr6	120429088	120439212	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3144	ENSG00000265725	413831	AL096854.1	ENSG00000286540	23299	None	None
L1FLnI_6q22.31k	L1	L1	L1FLnI	chr6	120636996	120647147	-	coding	AL096854.1	lncRNA	ANTISENSE	ENSG00000286540	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.31l	L1	L1	L1FLnI	chr6	120685241	120695268	+	coding	AL096854.1,RNA5SP215	lncRNA,rRNA_pseudogene	SENSE,SENSE	ENSG00000286540,ENSG00000200310	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.31m	L1	L1	L1FLnI	chr6	120744852	120754992	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL096854.1	ENSG00000286540	38063	COX6A1P3	ENSG00000216710	26228	None	None
L1FLnI_6q22.31n	L1	L1	L1FLnI	chr6	120815555	120824367	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	COX6A1P3	ENSG00000216710	34043	AL357513.1	ENSG00000287992	16366	None	None
L1FLnI_6q22.31o	L1	L1	L1FLnI	chr6	121148381	121157949	-	noncoding	TBC1D32	protein_coding	SENSE	ENSG00000146350	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_6q22.31	L1	L1	L1ORF2	chr6	121161709	121169739	+	coding	TBC1D32	protein_coding	ANTISENSE	ENSG00000146350	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.31p	L1	L1	L1FLnI	chr6	121241342	121250636	+	noncoding	TBC1D32	protein_coding	ANTISENSE	ENSG00000146350	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.31q	L1	L1	L1FLnI	chr6	121263654	121273767	+	noncoding	TBC1D32	protein_coding	ANTISENSE	ENSG00000146350	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.31r	L1	L1	L1FLnI	chr6	121282125	121291660	+	coding	TBC1D32	protein_coding	ANTISENSE	ENSG00000146350	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.31s	L1	L1	L1FLnI	chr6	121365306	121374257	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1286P	ENSG00000206598	10846	AL139098.1	ENSG00000207403	4540	None	None
L1FLnI_6q22.31t	L1	L1	L1FLnI	chr6	121565544	121574830	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU2-8P	ENSG00000222659	5502	RNU4-76P	ENSG00000201379	22918	chr6:121573577-121573686	None
L1FLnI_6q22.31u	L1	L1	L1FLnI	chr6	121699440	121709590	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL603865.1	ENSG00000217139	15168	HMGB3P18	ENSG00000220184	148589	None	None
L1FLnI_6q22.31v	L1	L1	L1FLnI	chr6	121944774	121954767	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-18P	ENSG00000199932	256881	HMGB3P18	ENSG00000220184	86006	None	None
L1FLnI_6q22.31w	L1	L1	L1FLnI	chr6	121980319	121989164	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-18P	ENSG00000199932	222484	HMGB3P18	ENSG00000220184	121551	None	None
L1FLnI_6q22.31x	L1	L1	L1FLnI	chr6	122536657	122546852	-	coding	PKIB	protein_coding	ANTISENSE	ENSG00000135549	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.31y	L1	L1	L1FLnI	chr6	122536671	122546852	-	coding	PKIB	protein_coding	ANTISENSE	ENSG00000135549	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.31z	L1	L1	L1FLnI	chr6	122558808	122567541	-	noncoding	PKIB,AL512283.2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000135549,ENSG00000287258	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.31aa	L1	L1	L1FLnI	chr6	122878810	122887702	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL591428.1	ENSG00000285652	87496	ATP5MGP2	ENSG00000232362	18822	None	None
L1FLnI_6q22.31ba	L1	L1	L1FLnI	chr6	122938858	122949050	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL591428.1	ENSG00000285652	26148	ATP5MGP2	ENSG00000232362	78870	None	None
L1FLnI_6q22.31ca	L1	L1	L1FLnI	chr6	122944737	122953926	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATP5MGP2	ENSG00000232362	84749	AL591428.1	ENSG00000285652	21272	chr6:122950695-122951012	None
L1FLnI_6q22.31da	L1	L1	L1FLnI	chr6	122952437	122961169	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATP5MGP2	ENSG00000232362	92449	AL591428.1	ENSG00000285652	14029	None	None
L1FLnI_6q22.31ea	L1	L1	L1FLnI	chr6	122982374	122991884	+	noncoding	AL591428.1	lncRNA	ANTISENSE	ENSG00000285652	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.31fa	L1	L1	L1FLnI	chr6	123138474	123147774	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CLVS2	ENSG00000146352	65549	TRDN	ENSG00000186439	68565	None	None
L1FLnI_6q22.31ga	L1	L1	L1FLnI	chr6	123158453	123168953	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CLVS2	ENSG00000146352	85528	TRDN	ENSG00000186439	47386	None	None
L1FLnI_6q22.31ha	L1	L1	L1FLnI	chr6	123178728	123189129	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CLVS2	ENSG00000146352	105803	TRDN	ENSG00000186439	27210	None	None
L1FLnI_6q22.31ia	L1	L1	L1FLnI	chr6	123444292	123454791	+	noncoding	TRDN,TRDN-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000186439,ENSG00000235535	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.31ja	L1	L1	L1FLnI	chr6	123444292	123454390	+	noncoding	TRDN,TRDN-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000186439,ENSG00000235535	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.31ka	L1	L1	L1FLnI	chr6	123468576	123478570	+	coding	TRDN,TRDN-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000186439,ENSG00000235535	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.31la	L1	L1	L1FLnI	chr6	123947119	123958148	-	noncoding	NKAIN2	protein_coding	ANTISENSE	ENSG00000188580	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr6:123948630-123948631
L1FLnI_6q22.31ma	L1	L1	L1FLnI	chr6	124342340	124352113	-	coding	NKAIN2	protein_coding	ANTISENSE	ENSG00000188580	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr6:124348573-124348608
L1FLnI_6q22.31na	L1	L1	L1FLnI	chr6	124342350	124352113	-	coding	NKAIN2	protein_coding	ANTISENSE	ENSG00000188580	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr6:124348573-124348608
L1FLnI_6q22.31oa	L1	L1	L1FLnI	chr6	124406697	124416766	-	noncoding	NKAIN2	protein_coding	ANTISENSE	ENSG00000188580	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr6:124415894-124415897
L1FLnI_6q22.31pa	L1	L1	L1FLnI	chr6	124706345	124716330	-	coding	NKAIN2,RNF217-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000188580,ENSG00000236548	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.31qa	L1	L1	L1FLnI	chr6	124722198	124732222	+	coding	NKAIN2,RNF217-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000188580,ENSG00000236548	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.31ra	L1	L1	L1FLnI	chr6	124801004	124811143	+	coding	NKAIN2,RNF217-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000188580,ENSG00000236548	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.31sa	L1	L1	L1FLnI	chr6	124801004	124811136	+	coding	NKAIN2,RNF217-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000188580,ENSG00000236548	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.31ta	L1	L1	L1FLnI	chr6	125239154	125248388	-	noncoding	TPD52L1,HDDC2	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000111907,ENSG00000111906	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.31ua	L1	L1	L1FLnI	chr6	125392426	125402744	+	coding	AL450332.1	lncRNA	ANTISENSE	ENSG00000226409	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.32a	L1	L1	L1FLnI	chr6	126323100	126333242	+	coding	AL356534.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000286215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.32b	L1	L1	L1FLnI	chr6	126389827	126401165	-	noncoding	AL356534.1	transcribed_processed_pseudogene	SENSE	ENSG00000286215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.32c	L1	L1	L1FLnI	chr6	126502274	126512168	+	noncoding	AL356534.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000286215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.32d	L1	L1	L1FLnI	chr6	126555551	126565079	+	noncoding	AL356534.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000286215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.32e	L1	L1	L1FLnI	chr6	126555551	126565072	+	noncoding	AL356534.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000286215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.32f	L1	L1	L1FLnI	chr6	126593331	126602855	-	coding	AL356534.1	transcribed_processed_pseudogene	SENSE	ENSG00000286215	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr6:126602522-126602546
L1FLnI_6q22.32g	L1	L1	L1FLnI	chr6	126608510	126619045	-	noncoding	AL356534.1	transcribed_processed_pseudogene	SENSE	ENSG00000286215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.32h	L1	L1	L1FLnI	chr6	126670053	126680069	+	coding	AL356534.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000286215	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.32i	L1	L1	L1FLnI	chr6	126722787	126732895	+	noncoding	AL356534.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000286215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.33a	L1	L1	L1FLnI	chr6	126980657	126989169	+	noncoding	AL356534.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000286215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.33b	L1	L1	L1FLnI	chr6	127039754	127049863	+	coding	AL356534.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000286215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.33c	L1	L1	L1FLnI	chr6	127251564	127261628	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356534.1	ENSG00000286215	37955	RNF146	ENSG00000118518	4982	None	None
L1FLnI_6q22.33d	L1	L1	L1FLnI	chr6	127589794	127599795	+	coding	C6orf58	protein_coding	SENSE	ENSG00000184530	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.33e	L1	L1	L1FLnI	chr6	127589794	127599792	+	coding	C6orf58	protein_coding	SENSE	ENSG00000184530	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.33f	L1	L1	L1FLnI	chr6	127639857	127648493	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL592291.1	ENSG00000219284	4536	AL356432.1	ENSG00000218187	6367	None	chr6:127642947-127642949
L1FLnI_6q22.33g	L1	L1	L1FLnI	chr6	127666931	127676447	-	coding	LINC02536	lncRNA	ANTISENSE	ENSG00000281248	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.33h	L1	L1	L1FLnI	chr6	127922702	127932839	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	THEMIS	ENSG00000172673	4071	PTPRK	ENSG00000152894	35940	None	None
L1FLnI_6q22.33i	L1	L1	L1FLnI	chr6	128292827	128301372	+	coding	PTPRK	protein_coding	ANTISENSE	ENSG00000152894	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:128295938-128296076	None
L1FLnI_6q22.33j	L1	L1	L1FLnI	chr6	128582190	128593840	+	noncoding	AL080315.1	misc_RNA	SENSE	ENSG00000206982	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.33k	L1	L1	L1FLnI	chr6	128773640	128783883	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LAMA2	ENSG00000196569	99258	AL589991.1	ENSG00000202200	11832	None	None
L1FLnI_6q22.33l	L1	L1	L1FLnI	chr6	128825964	128836122	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL589991.1	ENSG00000202200	64156	LAMA2	ENSG00000196569	47019	None	None
L1FLnI_6q22.33m	L1	L1	L1FLnI	chr6	128825964	128836146	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL589991.1	ENSG00000202200	64156	LAMA2	ENSG00000196569	46995	None	None
L1FLnI_6q22.33n	L1	L1	L1FLnI	chr6	128905135	128915163	-	coding	LAMA2	protein_coding	ANTISENSE	ENSG00000196569	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_6q22.33	L1	L1	L1FLI	chr6	128997385	129005430	+	coding	LAMA2	protein_coding	SENSE	ENSG00000196569	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.33o	L1	L1	L1FLnI	chr6	129166662	129176698	-	coding	LAMA2	protein_coding	ANTISENSE	ENSG00000196569	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.33p	L1	L1	L1FLnI	chr6	129221851	129231952	-	noncoding	LAMA2	protein_coding	ANTISENSE	ENSG00000196569	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.33q	L1	L1	L1FLnI	chr6	129565179	129575617	+	coding	AL356124.1	lncRNA	ANTISENSE	ENSG00000226149	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q22.33r	L1	L1	L1FLnI	chr6	129806551	129815274	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL451046.1	ENSG00000219302	4363	B3GALNT2P1	ENSG00000218725	4337	None	None
L1FLnI_6q22.33s	L1	L1	L1FLnI	chr6	129831936	129842081	+	noncoding	TMEM244	protein_coding	ANTISENSE	ENSG00000203756	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q23.1a	L1	L1	L1FLnI	chr6	130342587	130352719	+	coding	SAMD3	protein_coding	ANTISENSE	ENSG00000164483	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr6:130344823-130344825
L1FLnI_6q23.1b	L1	L1	L1FLnI	chr6	130472017	130482167	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM200A	ENSG00000164484	28954	AL357274.1	ENSG00000202438	91829	None	None
L1FLnI_6q23.1c	L1	L1	L1FLnI	chr6	130697817	130708267	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL583803.1	ENSG00000229923	39	SMLR1	ENSG00000256162	119139	None	None
L1FLnI_6q23.1d	L1	L1	L1FLnI	chr6	130813540	130822089	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL583803.1	ENSG00000229923	115762	SMLR1	ENSG00000256162	5317	None	None
L1FLnI_6q23.2a	L1	L1	L1FLnI	chr6	131082838	131092961	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	EPB41L2	ENSG00000079819	19516	AKAP7	ENSG00000118507	42506	None	None
L1FLnI_6q23.2b	L1	L1	L1FLnI	chr6	131234408	131244567	-	coding	AKAP7	protein_coding	ANTISENSE	ENSG00000118507	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:131241763-131241969	None
L1FLnI_6q23.2c	L1	L1	L1FLnI	chr6	131431125	131440452	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AKAP7	ENSG00000118507	147590	RPL21P67	ENSG00000219776	28607	None	None
L1FLnI_6q23.2d	L1	L1	L1FLnI	chr6	131526007	131535746	-	coding	ARG1	protein_coding	ANTISENSE	ENSG00000118520	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q23.2e	L1	L1	L1FLnI	chr6	132203623	132214850	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EEF1A1P36	ENSG00000223912	57132	LINC01013	ENSG00000228495	34249	None	chr6:132206094-132206108,chr6:132206165-132206189,chr6:132206246-132206264
L1FLnI_6q23.2f	L1	L1	L1FLnI	chr6	132301464	132311458	+	noncoding	MOXD1	protein_coding	ANTISENSE	ENSG00000079931	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q23.2g	L1	L1	L1FLnI	chr6	132348987	132358908	-	noncoding	MOXD1	protein_coding	SENSE	ENSG00000079931	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q23.2h	L1	L1	L1FLnI	chr6	132348997	132358908	-	noncoding	MOXD1	protein_coding	SENSE	ENSG00000079931	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q23.2i	L1	L1	L1FLnI	chr6	132419053	132429336	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STX7	ENSG00000079950	16531	MOXD1	ENSG00000079931	17578	None	None
L1FLnI_6q23.2j	L1	L1	L1FLnI	chr6	132631331	132641806	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TAAR2	ENSG00000146378	7056	TAAR1	ENSG00000146399	3092	None	None
L1FLnI_6q23.2k	L1	L1	L1FLnI	chr6	132980599	132989561	-	noncoding	LINC00326	lncRNA	ANTISENSE	ENSG00000231023	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_6q23.2	L1	L1	L1FLI	chr6	133019703	133027748	-	coding	LINC00326	lncRNA	ANTISENSE	ENSG00000231023	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q23.2l	L1	L1	L1FLnI	chr6	133117160	133127274	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTCYBP4	ENSG00000220113	23294	LINC00326	ENSG00000231023	9750	None	None
L1FLnI_6q23.2m	L1	L1	L1FLnI	chr6	133141575	133151604	-	coding	MTCYBP4	processed_pseudogene	ANTISENSE	ENSG00000220113	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr6:133148106-133148116
L1FLnI_6q23.2n	L1	L1	L1FLnI	chr6	133150323	133159052	-	coding	MTCYBP4	processed_pseudogene	ANTISENSE	ENSG00000220113	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q23.2o	L1	L1	L1FLnI	chr6	133483313	133492169	+	noncoding	EYA4	protein_coding	SENSE	ENSG00000112319	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q23.2p	L1	L1	L1FLnI	chr6	133610811	133621243	+	coding	TARID	lncRNA	ANTISENSE	ENSG00000227954	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:133611522-133611814	None
L1FLnI_6q23.2q	L1	L1	L1FLnI	chr6	133859719	133869548	-	noncoding	TARID,LINC01312	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000227954,ENSG00000223586	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q23.2r	L1	L1	L1FLnI	chr6	133927155	133937359	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TCF21	ENSG00000118526	31602	TBPL1	ENSG00000028839	14811	None	None
L1FLnI_6q23.2s	L1	L1	L1FLnI	chr6	134564912	134573509	+	noncoding	AL078590.2	lncRNA	ANTISENSE	ENSG00000232310	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q23.3a	L1	L1	L1FLnI	chr6	134785583	134795075	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121970.1	ENSG00000236389	78234	AL021939.1	ENSG00000213117	102799	None	None
L1FLnI_6q23.3b	L1	L1	L1FLnI	chr6	135149853	135160295	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MYB	ENSG00000118513	21013	HBS1L	ENSG00000112339	46797	None	None
L1FLnI_6q23.3c	L1	L1	L1FLnI	chr6	135559747	135568860	-	noncoding	LINC00271	lncRNA	ANTISENSE	ENSG00000231028	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q23.3d	L1	L1	L1FLnI	chr6	135595716	135604665	-	noncoding	LINC00271	lncRNA	ANTISENSE	ENSG00000231028	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:135602377-135602651	None
L1FLnI_6q23.3e	L1	L1	L1FLnI	chr6	135595718	135604665	-	noncoding	LINC00271	lncRNA	ANTISENSE	ENSG00000231028	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:135602377-135602651	None
L1FLnI_6q23.3f	L1	L1	L1FLnI	chr6	135764971	135775009	-	coding	LINC00271	lncRNA	ANTISENSE	ENSG00000231028	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q23.3g	L1	L1	L1FLnI	chr6	135777169	135786513	+	noncoding	LINC00271	lncRNA	SENSE	ENSG00000231028	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q23.3h	L1	L1	L1FLnI	chr6	135997228	136006868	+	coding	PDE7B,AL138828.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000171408,ENSG00000237596	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q23.3i	L1	L1	L1FLnI	chr6	137066334	137076810	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IL20RA	ENSG00000016402	21154	IL22RA2	ENSG00000164485	67010	None	chr6:137066761-137066777
L1FLnI_6q23.3j	L1	L1	L1FLnI	chr6	137129137	137140325	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IL20RA	ENSG00000016402	83957	IL22RA2	ENSG00000164485	3495	None	None
L1FLnI_6q23.3k	L1	L1	L1FLnI	chr6	137836815	137846304	-	coding	WAKMAR2	lncRNA	SENSE	ENSG00000237499	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q23.3l	L1	L1	L1FLnI	chr6	137885193	137895370	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591468.1	ENSG00000287393	5215	TNFAIP3	ENSG00000118503	1881	chr6:137892448-137892722,chr6:137895085-137895285	chr6:137892635-137892666,chr6:137892714-137892722
L1FLnI_6q23.3m	L1	L1	L1FLnI	chr6	137885193	137894944	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591468.1	ENSG00000287393	5641	TNFAIP3	ENSG00000118503	1881	chr6:137892448-137892722	chr6:137892635-137892666,chr6:137892714-137892722
L1FLnI_6q23.3n	L1	L1	L1FLnI	chr6	137983679	137993233	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP42	ENSG00000219463	2037	LINC02865	ENSG00000229922	11157	None	None
L1FLnI_6q23.3o	L1	L1	L1FLnI	chr6	138048884	138058766	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP42	ENSG00000219463	52737	PERP	ENSG00000112378	29739	None	None
L1FLnI_6q24.1a	L1	L1	L1FLnI	chr6	138627301	138636331	+	noncoding	NHSL1	protein_coding	ANTISENSE	ENSG00000135540	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q24.1b	L1	L1	L1FLnI	chr6	138705439	138715550	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GVQW2	ENSG00000279968	9661	AL590617.2	ENSG00000225177	8151	None	None
L1FLnI_6q24.1c	L1	L1	L1FLnI	chr6	139083933	139094062	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HECA	ENSG00000112406	41018	ABRACL	ENSG00000146386	40631	None	None
L1FLnI_6q24.1d	L1	L1	L1FLnI	chr6	139206999	139217130	+	coding	AL031772.1,AL158850.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000231329,ENSG00000272446	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q24.1e	L1	L1	L1FLnI	chr6	140111227	140121393	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL357146.1	ENSG00000236013	17506	RNA5SP220	ENSG00000252107	37198	None	None
L1FLnI_6q24.1f	L1	L1	L1FLnI	chr6	140125610	140134276	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL357146.1	ENSG00000236013	31889	RNA5SP220	ENSG00000252107	24315	None	None
L1FLnI_6q24.1g	L1	L1	L1FLnI	chr6	140226343	140236743	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3668	ENSG00000263514	21017	AL035446.2	ENSG00000285875	339045	None	None
L1FLnI_6q24.1h	L1	L1	L1FLnI	chr6	141333879	141342569	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357080.1	ENSG00000275138	313853	AL355596.2	ENSG00000286452	60671	None	None
L1FLnI_6q24.1i	L1	L1	L1FLnI	chr6	141341758	141351064	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355596.2	ENSG00000286452	52176	AL357080.1	ENSG00000275138	321732	None	None
L1FLnI_6q24.1j	L1	L1	L1FLnI	chr6	141562607	141572636	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP106	ENSG00000222764	76195	RPS3AP23	ENSG00000218351	63014	chr6:141562915-141563073	None
L1FLnI_6q24.1k	L1	L1	L1FLnI	chr6	141742527	141752536	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS3AP23	ENSG00000218351	106024	NMBR	ENSG00000135577	305794	None	None
L1FLnI_6q24.1l	L1	L1	L1FLnI	chr6	141766505	141776492	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NMBR	ENSG00000135577	281838	RPS3AP23	ENSG00000218351	130002	chr6:141770154-141770362	None
L1FLnI_6q24.1m	L1	L1	L1FLnI	chr6	141766847	141776492	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NMBR	ENSG00000135577	281838	RPS3AP23	ENSG00000218351	130344	chr6:141770154-141770362	None
L1FLnI_6q24.1n	L1	L1	L1FLnI	chr6	141786987	141795898	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS3AP23	ENSG00000218351	150484	NMBR	ENSG00000135577	262432	None	None
L1FLnI_6q24.1o	L1	L1	L1FLnI	chr6	141811316	141821342	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS3AP23	ENSG00000218351	174813	NMBR	ENSG00000135577	236988	None	None
L1FLnI_6q24.1p	L1	L1	L1FLnI	chr6	141913365	141923380	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS3AP23	ENSG00000218351	276862	NMBR	ENSG00000135577	134950	None	None
L1FLnI_6q24.1q	L1	L1	L1FLnI	chr6	141936310	141946785	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS3AP23	ENSG00000218351	299807	NMBR	ENSG00000135577	111545	None	None
L1FLnI_6q24.1r	L1	L1	L1FLnI	chr6	141966029	141976201	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS3AP23	ENSG00000218351	329526	NMBR	ENSG00000135577	82129	None	None
L1FLnI_6q24.2a	L1	L1	L1FLnI	chr6	142512025	142520811	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359313.1	ENSG00000236366	5644	ADGRG6	ENSG00000112414	65759	None	None
L1FLnI_6q24.2b	L1	L1	L1FLnI	chr6	142573515	142583672	+	coding	AL359313.1	lncRNA	ANTISENSE	ENSG00000236366	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q24.2c	L1	L1	L1FLnI	chr6	143301727	143311857	-	coding	AIG1	protein_coding	ANTISENSE	ENSG00000146416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q24.2d	L1	L1	L1FLnI	chr6	143348743	143358028	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031320.1	ENSG00000270655	28553	AL136116.3	ENSG00000217648	5360	None	None
L1FLnI_6q24.2e	L1	L1	L1FLnI	chr6	143349279	143358028	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031320.1	ENSG00000270655	28553	AL136116.3	ENSG00000217648	5896	None	None
L1FLnI_6q24.2f	L1	L1	L1FLnI	chr6	143665377	143674419	-	noncoding	PHACTR2	protein_coding	ANTISENSE	ENSG00000112419	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:143673703-143673861	None
L1FLnI_6q24.2g	L1	L1	L1FLnI	chr6	143851078	143860571	-	noncoding	LTV1,AL049844.3,AL049844.2	protein_coding,protein_coding,processed_pseudogene	ANTISENSE,ANTISENSE,SENSE	ENSG00000135521,ENSG00000280148,ENSG00000270890	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q24.2h	L1	L1	L1FLnI	chr6	144040699	144050835	-	coding	PLAGL1	protein_coding	SENSE	ENSG00000118495	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q24.2i	L1	L1	L1FLnI	chr6	144203250	144213929	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL024474.1	ENSG00000216475	43105	TPT1P4	ENSG00000217027	2285	None	None
L1FLnI_6q24.2j	L1	L1	L1FLnI	chr6	144501762	144512192	-	noncoding	UTRN	protein_coding	ANTISENSE	ENSG00000152818	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q24.2k	L1	L1	L1FLnI	chr6	144669097	144678054	-	noncoding	UTRN	protein_coding	ANTISENSE	ENSG00000152818	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:144675367-144675739	None
L1FLnI_6q24.2l	L1	L1	L1FLnI	chr6	144669492	144678054	-	noncoding	UTRN	protein_coding	ANTISENSE	ENSG00000152818	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:144675367-144675739	None
L1FLnI_6q24.2m	L1	L1	L1FLnI	chr6	144971219	144981368	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL023283.1	ENSG00000285598	315177	UTRN	ENSG00000152818	118185	None	None
L1FLnI_6q24.3a	L1	L1	L1FLnI	chr6	145297089	145305878	-	coding	AL023283.1	lncRNA	ANTISENSE	ENSG00000285598	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q24.3b	L1	L1	L1FLnI	chr6	145659984	145668674	+	coding	EPM2A	protein_coding	ANTISENSE	ENSG00000112425	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q24.3c	L1	L1	L1FLnI	chr6	145669803	145679921	+	noncoding	EPM2A	protein_coding	ANTISENSE	ENSG00000112425	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q24.3d	L1	L1	L1FLnI	chr6	146455971	146465883	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAB32	ENSG00000118508	77950	GRM1	ENSG00000152822	18370	None	None
L1FLnI_6q24.3e	L1	L1	L1FLnI	chr6	146508981	146519320	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAB32	ENSG00000118508	24513	GRM1	ENSG00000152822	71380	None	None
L1FLnI_6q24.3f	L1	L1	L1FLnI	chr6	146605330	146615284	-	noncoding	ADGB	protein_coding	ANTISENSE	ENSG00000118492	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q24.3g	L1	L1	L1FLnI	chr6	147292603	147301852	+	noncoding	STXBP5	protein_coding	SENSE	ENSG00000164506	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr6:147297733-147297738
L1FLnI_6q24.3h	L1	L1	L1FLnI	chr6	147794566	147804122	-	coding	AL033504.1	lncRNA	ANTISENSE	ENSG00000227681	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q25.1a	L1	L1	L1FLnI	chr6	148582520	148591368	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP40	ENSG00000231368	56339	SNRPEP6	ENSG00000217824	14866	None	None
L1FLnI_6q25.1b	L1	L1	L1FLnI	chr6	148857999	148868130	-	coding	UST	protein_coding	ANTISENSE	ENSG00000111962	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr6:148867649-148867656
L1FLnI_6q25.1c	L1	L1	L1FLnI	chr6	149185781	149194339	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031056.1	ENSG00000228408	23587	AL603766.1	ENSG00000219487	73109	None	None
L1FLnI_6q25.1d	L1	L1	L1FLnI	chr6	151642219	151652716	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ESR1	ENSG00000091831	3975	CCDC170	ENSG00000120262	21026	chr6:151651905-151652275	chr6:151651282-151651285
L1FLnI_6q25.1e	L1	L1	L1FLnI	chr6	151711022	151720813	-	noncoding	ESR1	protein_coding	ANTISENSE	ENSG00000091831	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q25.1f	L1	L1	L1FLnI	chr6	152024660	152034801	+	coding	ESR1	protein_coding	SENSE	ENSG00000091831	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q25.1g	L1	L1	L1FLnI	chr6	152024660	152034819	+	coding	ESR1	protein_coding	SENSE	ENSG00000091831	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q25.1h	L1	L1	L1FLnI	chr6	152075004	152084297	+	noncoding	ESR1	protein_coding	SENSE	ENSG00000091831	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q25.2a	L1	L1	L1FLnI	chr6	152605500	152615629	+	noncoding	SYNE1	protein_coding	ANTISENSE	ENSG00000131018	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q25.2b	L1	L1	L1FLnI	chr6	153107146	153117588	+	noncoding	RGS17	protein_coding	ANTISENSE	ENSG00000091844	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q25.2c	L1	L1	L1FLnI	chr6	153453811	153463379	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO2P31	ENSG00000217160	202328	AL358134.1	ENSG00000237312	26657	None	None
L1FLnI_6q25.2d	L1	L1	L1FLnI	chr6	153453811	153462434	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO2P31	ENSG00000217160	203273	AL358134.1	ENSG00000237312	26657	None	None
L1FLnI_6q25.2e	L1	L1	L1FLnI	chr6	154021940	154032547	-	noncoding	OPRM1	protein_coding	ANTISENSE	ENSG00000112038	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q25.2f	L1	L1	L1FLnI	chr6	154168671	154178799	+	noncoding	OPRM1,IPCEF1,AL357075.4	protein_coding,protein_coding,protein_coding	SENSE,ANTISENSE,ANTISENSE	ENSG00000112038,ENSG00000074706,ENSG00000288520	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q25.3a	L1	L1	L1FLnI	chr6	155566845	155575494	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-152P	ENSG00000238789	79469	NOX3	ENSG00000074771	111006	None	None
L1ORF2_6q25.3	L1	L1	L1ORF2	chr6	156033135	156041179	+	coding	AL589693.1	lncRNA	ANTISENSE	ENSG00000287092	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q25.3b	L1	L1	L1FLnI	chr6	156324482	156334510	-	coding	AL589693.1	lncRNA	SENSE	ENSG00000287092	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_6q25.3	L1	L1	L1FLI	chr6	156360251	156368290	+	coding	AL589693.1,AL512658.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000287092,ENSG00000285797	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q25.3c	L1	L1	L1FLnI	chr6	156601206	156611338	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL512658.1	ENSG00000227360	96195	H3P28	ENSG00000220347	50712	None	None
L1FLnI_6q25.3d	L1	L1	L1FLnI	chr6	158177979	158187536	-	coding	GTF2H5	protein_coding	ANTISENSE	ENSG00000272047	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q25.3e	L1	L1	L1FLnI	chr6	158613991	158623015	-	noncoding	TMEM181,TATDN2P2	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000146433,ENSG00000218226	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q25.3f	L1	L1	L1FLnI	chr6	159284010	159294496	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357832.1	ENSG00000231178	59426	FNDC1	ENSG00000164694	11902	None	None
L1FLnI_6q25.3g	L1	L1	L1FLnI	chr6	159284026	159294496	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357832.1	ENSG00000231178	59426	FNDC1	ENSG00000164694	11918	None	None
L1FLnI_6q25.3h	L1	L1	L1FLnI	chr6	159514714	159523715	-	noncoding	AL078604.4	lncRNA	SENSE	ENSG00000286533	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q25.3i	L1	L1	L1FLnI	chr6	159667116	159677255	+	noncoding	SOD2	protein_coding	ANTISENSE	ENSG00000112096	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr6:159668584-159668586
L1FLnI_6q25.3j	L1	L1	L1FLnI	chr6	159700642	159710766	+	noncoding	SOD2,SOD2	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000112096,ENSG00000285441	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:159701107-159701198	chr6:159700700-159700726,chr6:159701792-159701801,chr6:159701874-159701891,chr6:159701905-159701934,chr6:159701947-159701976
L1FLnI_6q25.3k	L1	L1	L1FLnI	chr6	159700642	159710761	+	noncoding	SOD2,SOD2	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000112096,ENSG00000285441	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:159701107-159701198	chr6:159700700-159700726,chr6:159701792-159701801,chr6:159701874-159701891,chr6:159701905-159701934,chr6:159701947-159701976
L1FLnI_6q25.3l	L1	L1	L1FLnI	chr6	160012802	160021744	+	noncoding	IGF2R	protein_coding	SENSE	ENSG00000197081	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q25.3m	L1	L1	L1FLnI	chr6	160208230	160218380	-	coding	SLC22A2	protein_coding	SENSE	ENSG00000112499	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q25.3n	L1	L1	L1FLnI	chr6	160396233	160406681	+	noncoding	SLC22A3	protein_coding	SENSE	ENSG00000146477	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr6:160400109-160400113
L1FLnI_6q25.3o	L1	L1	L1FLnI	chr6	160397182	160406681	+	noncoding	SLC22A3	protein_coding	SENSE	ENSG00000146477	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr6:160400109-160400113
L1FLnI_6q25.3p	L1	L1	L1FLnI	chr6	160561033	160571146	+	noncoding	LPA	protein_coding	ANTISENSE	ENSG00000198670	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q26a	L1	L1	L1FLnI	chr6	160679221	160689251	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL109933.1	ENSG00000224477	9037	AL109933.2	ENSG00000243831	2698	chr6:160679532-160679652	None
L1FLnI_6q26b	L1	L1	L1FLnI	chr6	160741169	160750393	-	coding	PLG,AL109933.5	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000122194,ENSG00000287558	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr6:160748999-160749002,chr6:160749230-160749241
L1FLnI_6q26c	L1	L1	L1FLnI	chr6	160934570	160944338	-	noncoding	AL139393.2,AL139393.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000233342,ENSG00000231863	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q26d	L1	L1	L1FLnI	chr6	161172146	161182255	-	coding	AGPAT4	protein_coding	SENSE	ENSG00000026652	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q26e	L1	L1	L1FLnI	chr6	162838094	162848120	-	coding	PACRG	protein_coding	ANTISENSE	ENSG00000112530	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q26f	L1	L1	L1FLnI	chr6	162941534	162950131	+	coding	PACRG	protein_coding	SENSE	ENSG00000112530	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q26g	L1	L1	L1FLnI	chr6	162989239	162999262	-	coding	PACRG	protein_coding	ANTISENSE	ENSG00000112530	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q26h	L1	L1	L1FLnI	chr6	163065554	163075208	+	noncoding	PACRG	protein_coding	SENSE	ENSG00000112530	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q27a	L1	L1	L1FLnI	chr6	164485084	164494900	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450345.2	ENSG00000287550	296388	AL358972.1	ENSG00000226739	136440	None	None
L1FLnI_6q27b	L1	L1	L1FLnI	chr6	164702253	164712399	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL450345.2	ENSG00000287550	78889	AL358972.1	ENSG00000226739	353609	None	None
L1FLnI_6q27c	L1	L1	L1FLnI	chr6	164781462	164791483	-	coding	AL450345.2	lncRNA	SENSE	ENSG00000287550	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q27d	L1	L1	L1FLnI	chr6	165279908	165289458	+	noncoding	C6orf118	protein_coding	ANTISENSE	ENSG00000112539	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr6:165282651-165282663	None
L1FLnI_6q27e	L1	L1	L1FLnI	chr6	165279908	165289434	+	noncoding	C6orf118	protein_coding	ANTISENSE	ENSG00000112539	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr6:165282651-165282663	None
L1FLnI_6q27f	L1	L1	L1FLnI	chr6	165365174	165374743	+	coding	PDE10A	protein_coding	ANTISENSE	ENSG00000112541	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q27g	L1	L1	L1FLnI	chr6	165863105	165871744	+	noncoding	PDE10A	protein_coding	ANTISENSE	ENSG00000112541	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q27h	L1	L1	L1FLnI	chr6	166785376	166795515	+	coding	RPS6KA2	protein_coding	ANTISENSE	ENSG00000071242	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q27i	L1	L1	L1FLnI	chr6	166839954	166849410	+	noncoding	RPS6KA2	protein_coding	ANTISENSE	ENSG00000071242	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q27j	L1	L1	L1FLnI	chr6	166881313	166891497	+	noncoding	RPS6KA2,AL159163.1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000071242,ENSG00000249141	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q27k	L1	L1	L1FLnI	chr6	167080432	167090407	-	coding	FGFR1OP,Z94721.2	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000213066,ENSG00000272980	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q27l	L1	L1	L1FLnI	chr6	168007659	168017482	-	coding	KIF25	protein_coding	ANTISENSE	ENSG00000125337	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr6:168007582-168007975	None
L1FLnI_6q27m	L1	L1	L1FLnI	chr6	168139442	168150149	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL611929.1	ENSG00000234768	44209	FRMD1	ENSG00000153303	37931	None	None
L1FLnI_6q27n	L1	L1	L1FLnI	chr6	168475916	168485625	+	noncoding	SMOC2	protein_coding	SENSE	ENSG00000112562	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q27o	L1	L1	L1FLnI	chr6	169203868	169212879	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02544	ENSG00000261039	21027	BX322234.1	ENSG00000226445	375	None	None
L1FLnI_6q27p	L1	L1	L1FLnI	chr6	169347413	169357818	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02519	ENSG00000226194	12180	VTA1P1	ENSG00000224999	49454	None	None
L1FLnI_6q27q	L1	L1	L1FLnI	chr6	169354054	169362976	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	VTA1P1	ENSG00000224999	56095	LINC02519	ENSG00000226194	7022	None	None
L1FLnI_6q27r	L1	L1	L1FLnI	chr6	169516211	169525754	+	noncoding	AL031315.1,WDR27	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000285733,ENSG00000184465	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q27s	L1	L1	L1FLnI	chr6	169731817	169742237	-	noncoding	AL354892.1,TCTE3	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000227704,ENSG00000184786	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q27t	L1	L1	L1FLnI	chr6	170190318	170199688	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL596442.2	ENSG00000273100	10658	RPL12P23	ENSG00000218716	81	None	None
L1FLnI_6q27u	L1	L1	L1FLnI	chr6	170346210	170355142	+	noncoding	FAM120B	protein_coding	SENSE	ENSG00000112584	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_6q27v	L1	L1	L1FLnI	chr6	170513491	170522522	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL008628.1	ENSG00000261003	94166	PSMB1	ENSG00000008018	12598	None	None
L1FLnI_6q27w	L1	L1	L1FLnI	chr6	170643424	170653846	-	noncoding	AL672310.1,WBP1LP8	lncRNA,processed_pseudogene	ANTISENSE,SENSE	ENSG00000230423,ENSG00000273640	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p22.3	L1	L1	L1FLnI	chr7	2740054	2750174	+	coding	AMZ1,GNA12	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000174945,ENSG00000146535	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p22.2	L1	L1	L1FLnI	chr7	3118047	3128190	+	coding	AC024028.1	lncRNA	ANTISENSE	ENSG00000228334	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr7:3118041-3118057
L1FLnI_7p22.1a	L1	L1	L1FLnI	chr7	7005306	7015448	-	coding	AC079804.3	lncRNA	SENSE	ENSG00000287860	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p22.1b	L1	L1	L1FLnI	chr7	7027883	7037042	-	noncoding	AC079804.3	lncRNA	SENSE	ENSG00000287860	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p22.1c	L1	L1	L1FLnI	chr7	7082943	7093240	-	noncoding	AC079804.3	lncRNA	SENSE	ENSG00000287860	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p22.1d	L1	L1	L1FLnI	chr7	7139103	7149247	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C1GALT1	ENSG00000106392	7687	AC079804.3	ENSG00000287860	34621	None	None
L1FLnI_7p22.1e	L1	L1	L1FLnI	chr7	7139115	7149247	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C1GALT1	ENSG00000106392	7687	AC079804.3	ENSG00000287860	34633	None	None
L1FLnI_7p22.1f	L1	L1	L1FLnI	chr7	7195566	7205873	-	noncoding	C1GALT1	protein_coding	ANTISENSE	ENSG00000106392	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3a	L1	L1	L1FLnI	chr7	7387531	7397894	-	coding	COL28A1	protein_coding	SENSE	ENSG00000215018	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3b	L1	L1	L1FLnI	chr7	7461594	7471620	+	coding	COL28A1	protein_coding	ANTISENSE	ENSG00000215018	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3c	L1	L1	L1FLnI	chr7	7655818	7666277	-	noncoding	RPA3,UMAD1,AC007161.3	protein_coding,protein_coding,lncRNA	SENSE,ANTISENSE,ANTISENSE	ENSG00000106399,ENSG00000219545,ENSG00000283549	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3d	L1	L1	L1FLnI	chr7	8092826	8102768	+	noncoding	GLCCI1	protein_coding	SENSE	ENSG00000106415	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3e	L1	L1	L1FLnI	chr7	8235930	8246073	+	noncoding	ICA1	protein_coding	ANTISENSE	ENSG00000003147	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr7:8237225-8237243,chr7:8236878-8236921,chr7:8236816-8236826
L1FLnI_7p21.3f	L1	L1	L1FLnI	chr7	8297615	8307640	-	coding	AC007128.1,AC007128.2	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000229970,ENSG00000272328	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3g	L1	L1	L1FLnI	chr7	8725842	8735868	-	coding	NXPH1	protein_coding	ANTISENSE	ENSG00000122584	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3h	L1	L1	L1FLnI	chr7	8732392	8743110	-	coding	NXPH1	protein_coding	ANTISENSE	ENSG00000122584	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:8739169-8739196	None
L1FLnI_7p21.3i	L1	L1	L1FLnI	chr7	9162888	9173354	-	noncoding	AC004852.2,AC004852.3	lncRNA,processed_pseudogene	SENSE,SENSE	ENSG00000278254,ENSG00000278446	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr7:9162857-9163173	chr7:9172747-9172754
L1FLnI_7p21.3j	L1	L1	L1FLnI	chr7	9162898	9173354	-	noncoding	AC004852.2,AC004852.3	lncRNA,processed_pseudogene	SENSE,SENSE	ENSG00000278254,ENSG00000278446	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr7:9162857-9163173	chr7:9172747-9172754
L1FLnI_7p21.3k	L1	L1	L1FLnI	chr7	9247062	9257527	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004852.2	ENSG00000278254	57205	GAPDHP68	ENSG00000233876	357451	None	None
L1FLnI_7p21.3l	L1	L1	L1FLnI	chr7	9247062	9256516	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004852.2	ENSG00000278254	57205	GAPDHP68	ENSG00000233876	358462	None	None
L1FLnI_7p21.3m	L1	L1	L1FLnI	chr7	9360234	9369952	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004852.2	ENSG00000278254	170377	GAPDHP68	ENSG00000233876	245026	None	None
L1FLnI_7p21.3n	L1	L1	L1FLnI	chr7	9360234	9369020	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004852.2	ENSG00000278254	170377	GAPDHP68	ENSG00000233876	245958	None	None
L1FLnI_7p21.3o	L1	L1	L1FLnI	chr7	9398259	9408281	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP68	ENSG00000233876	206697	AC004852.2	ENSG00000278254	208402	None	None
L1FLnI_7p21.3p	L1	L1	L1FLnI	chr7	9432894	9443024	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC004852.2	ENSG00000278254	243037	GAPDHP68	ENSG00000233876	171954	None	None
L1FLnI_7p21.3q	L1	L1	L1FLnI	chr7	9487506	9497713	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP68	ENSG00000233876	117265	AC004852.2	ENSG00000278254	297649	None	None
L1FLnI_7p21.3r	L1	L1	L1FLnI	chr7	9909133	9917817	-	noncoding	AC010991.1	lncRNA	ANTISENSE	ENSG00000235431	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3s	L1	L1	L1FLnI	chr7	10244008	10254514	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004879.2	ENSG00000286639	4145	AC004949.1	ENSG00000283117	195306	None	None
L1FLnI_7p21.3t	L1	L1	L1FLnI	chr7	10266719	10276857	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004879.2	ENSG00000286639	26856	AC004949.1	ENSG00000283117	172963	None	None
L1FLnI_7p21.3u	L1	L1	L1FLnI	chr7	10369062	10379199	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004879.2	ENSG00000286639	129199	AC004949.1	ENSG00000283117	70621	None	None
L1FLnI_7p21.3v	L1	L1	L1FLnI	chr7	10440652	10449234	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004879.2	ENSG00000286639	200789	AC004949.1	ENSG00000283117	586	None	None
L1FLnI_7p21.3w	L1	L1	L1FLnI	chr7	10497472	10507595	+	coding	AC004949.1	lncRNA	ANTISENSE	ENSG00000283117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3x	L1	L1	L1FLnI	chr7	10523959	10533728	+	noncoding	AC004949.1	lncRNA	ANTISENSE	ENSG00000283117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3y	L1	L1	L1FLnI	chr7	10623366	10632324	+	noncoding	AC004949.1	lncRNA	ANTISENSE	ENSG00000283117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3z	L1	L1	L1FLnI	chr7	10665991	10676332	-	noncoding	AC004949.1	lncRNA	SENSE	ENSG00000283117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3aa	L1	L1	L1FLnI	chr7	10680710	10690382	+	noncoding	AC004949.1	lncRNA	ANTISENSE	ENSG00000283117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3ba	L1	L1	L1FLnI	chr7	10692095	10702515	+	noncoding	AC004949.1	lncRNA	ANTISENSE	ENSG00000283117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3ca	L1	L1	L1FLnI	chr7	10738116	10747580	+	noncoding	AC004949.1	lncRNA	ANTISENSE	ENSG00000283117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3da	L1	L1	L1FLnI	chr7	10743589	10753727	+	noncoding	AC004949.1	lncRNA	ANTISENSE	ENSG00000283117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3ea	L1	L1	L1FLnI	chr7	10805400	10815550	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC007029.1	ENSG00000201774	86428	AC004949.1	ENSG00000283117	25456	None	None
L1FLnI_7p21.3fa	L1	L1	L1FLnI	chr7	10959603	10969727	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PHF14	ENSG00000106443	3609	AC007029.2	ENSG00000271185	18868	None	None
L1FLnI_7p21.3ga	L1	L1	L1FLnI	chr7	11347225	11355932	-	coding	AC004160.1	lncRNA	ANTISENSE	ENSG00000230333	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3ha	L1	L1	L1FLnI	chr7	11385273	11395552	-	noncoding	AC004160.1,THSD7A	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000230333,ENSG00000005108	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3ia	L1	L1	L1FLnI	chr7	11671475	11681899	+	noncoding	THSD7A	protein_coding	ANTISENSE	ENSG00000005108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3ja	L1	L1	L1FLnI	chr7	11973817	11982863	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	THSD7A	ENSG00000005108	141619	TMEM106B	ENSG00000106460	228407	None	chr7:11974901-11974904
L1FLnI_7p21.3ka	L1	L1	L1FLnI	chr7	12164386	12174820	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM106B	ENSG00000106460	36450	THSD7A	ENSG00000005108	332188	None	None
L1FLnI_7p21.3la	L1	L1	L1FLnI	chr7	12427248	12435989	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC013470.4	ENSG00000274970	3430	VWDE	ENSG00000146530	23307	None	None
L1FLnI_7p21.3ma	L1	L1	L1FLnI	chr7	12493713	12503738	+	coding	AC013470.2	protein_coding	SENSE	ENSG00000226690	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3na	L1	L1	L1FLnI	chr7	12836063	12846208	+	coding	AC011287.1	lncRNA	SENSE	ENSG00000229618	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3oa	L1	L1	L1FLnI	chr7	12935143	12943727	-	noncoding	AC011287.1	lncRNA	ANTISENSE	ENSG00000229618	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:12942711-12942858	None
L1FLnI_7p21.3pa	L1	L1	L1FLnI	chr7	12996239	13005467	-	noncoding	AC011287.1	lncRNA	ANTISENSE	ENSG00000229618	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3qa	L1	L1	L1FLnI	chr7	13120330	13130481	-	coding	AC011287.1	lncRNA	ANTISENSE	ENSG00000229618	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3ra	L1	L1	L1FLnI	chr7	13203766	13212274	-	noncoding	AC011287.1	lncRNA	ANTISENSE	ENSG00000229618	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3sa	L1	L1	L1FLnI	chr7	13268196	13278329	-	coding	AC011287.1	lncRNA	ANTISENSE	ENSG00000229618	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.3ta	L1	L1	L1FLnI	chr7	13418110	13427249	+	noncoding	AC011287.1	lncRNA	SENSE	ENSG00000229618	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:13423175-13423568	None
L1FLnI_7p21.3ua	L1	L1	L1FLnI	chr7	13485282	13495725	+	noncoding	AC011287.1	lncRNA	SENSE	ENSG00000229618	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr7:13491657-13491664
L1FLnI_7p21.3va	L1	L1	L1FLnI	chr7	13667589	13677969	-	noncoding	AC011287.1	lncRNA	ANTISENSE	ENSG00000229618	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.2a	L1	L1	L1FLnI	chr7	13802771	13812792	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC011287.1	ENSG00000229618	50851	AC005019.2	ENSG00000224330	41563	None	None
L1FLnI_7p21.2b	L1	L1	L1FLnI	chr7	14219804	14228794	-	noncoding	DGKB	protein_coding	SENSE	ENSG00000136267	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:14221701-14221948	None
L1FLnI_7p21.2c	L1	L1	L1FLnI	chr7	14275372	14285521	+	coding	DGKB	protein_coding	ANTISENSE	ENSG00000136267	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.2d	L1	L1	L1FLnI	chr7	14309762	14319790	+	coding	DGKB	protein_coding	ANTISENSE	ENSG00000136267	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.2e	L1	L1	L1FLnI	chr7	14644132	14654168	+	coding	DGKB	protein_coding	ANTISENSE	ENSG00000136267	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.2f	L1	L1	L1FLnI	chr7	14701046	14710479	+	coding	DGKB	protein_coding	ANTISENSE	ENSG00000136267	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.2g	L1	L1	L1FLnI	chr7	15271634	15280526	-	noncoding	AGMO	protein_coding	SENSE	ENSG00000187546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.2h	L1	L1	L1FLnI	chr7	15276042	15287730	+	noncoding	AGMO	protein_coding	ANTISENSE	ENSG00000187546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.2i	L1	L1	L1FLnI	chr7	15513874	15524345	+	noncoding	AGMO	protein_coding	ANTISENSE	ENSG00000187546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.2j	L1	L1	L1FLnI	chr7	15543811	15553833	+	coding	AGMO	protein_coding	ANTISENSE	ENSG00000187546	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.2k	L1	L1	L1FLnI	chr7	15652169	15662071	-	noncoding	MEOX2	protein_coding	SENSE	ENSG00000106511	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:15655805-15656058,chr7:15657571-15657636	None
L1FLnI_7p21.2l	L1	L1	L1FLnI	chr7	15892504	15901165	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006041.1	ENSG00000229379	50144	CRPPA	ENSG00000214960	186360	None	None
L1FLnI_7p21.2m	L1	L1	L1FLnI	chr7	15936733	15946755	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC006041.1	ENSG00000229379	94373	CRPPA	ENSG00000214960	140770	None	None
L1FLnI_7p21.2n	L1	L1	L1FLnI	chr7	15989374	15998822	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CRPPA	ENSG00000214960	88703	AC006041.1	ENSG00000229379	147014	None	chr7:15991380-15991393
L1FLnI_7p21.2o	L1	L1	L1FLnI	chr7	16102676	16112540	+	noncoding	CRPPA	protein_coding	ANTISENSE	ENSG00000214960	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.2p	L1	L1	L1FLnI	chr7	16212930	16222957	+	coding	CRPPA,CRPPA-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000214960,ENSG00000229688	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.2q	L1	L1	L1FLnI	chr7	16377614	16387640	-	coding	CRPPA	protein_coding	SENSE	ENSG00000214960	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.1a	L1	L1	L1FLnI	chr7	16821880	16830614	+	noncoding	AGR2	protein_coding	ANTISENSE	ENSG00000106541	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.1b	L1	L1	L1FLnI	chr7	16909104	16917647	-	noncoding	AHR	protein_coding	ANTISENSE	ENSG00000106546	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr7:16915567-16915581,chr7:16916333-16916365
L1FLnI_7p21.1c	L1	L1	L1FLnI	chr7	17211719	17221855	+	coding	AHR,AC073332.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000106546,ENSG00000237773	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.1d	L1	L1	L1FLnI	chr7	17694889	17704771	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006482.1	ENSG00000228675	14230	SNX13	ENSG00000071189	85990	None	None
L1FLnI_7p21.1e	L1	L1	L1FLnI	chr7	17694889	17704319	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006482.1	ENSG00000228675	14230	SNX13	ENSG00000071189	86442	None	None
L1FLnI_7p21.1f	L1	L1	L1FLnI	chr7	17731219	17741320	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC006482.1	ENSG00000228675	50560	SNX13	ENSG00000071189	49441	None	None
L1FLnI_7p21.1g	L1	L1	L1FLnI	chr7	17803166	17813625	+	noncoding	SNX13	protein_coding	ANTISENSE	ENSG00000071189	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.1h	L1	L1	L1FLnI	chr7	18007275	18016791	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRPS1L1	ENSG00000229937	9979	AC080080.2	ENSG00000280340	6396	None	None
L1FLnI_7p21.1i	L1	L1	L1FLnI	chr7	18168959	18179096	-	noncoding	HDAC9	protein_coding	ANTISENSE	ENSG00000048052	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.1j	L1	L1	L1FLnI	chr7	18733768	18743906	-	coding	HDAC9	protein_coding	ANTISENSE	ENSG00000048052	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.1k	L1	L1	L1FLnI	chr7	18984574	18994569	-	coding	HDAC9	protein_coding	ANTISENSE	ENSG00000048052	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.1l	L1	L1	L1FLnI	chr7	19033736	19043886	-	noncoding	TWIST1	protein_coding	SENSE	ENSG00000122691	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.1m	L1	L1	L1FLnI	chr7	19042241	19052389	+	coding	TWIST1	protein_coding	ANTISENSE	ENSG00000122691	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.1n	L1	L1	L1FLnI	chr7	19070603	19079395	+	noncoding	TWIST1	protein_coding	ANTISENSE	ENSG00000122691	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.1o	L1	L1	L1FLnI	chr7	19188543	19198547	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC007091.1	ENSG00000223838	154984	AC003986.1	ENSG00000229533	42290	None	None
L1FLnI_7p21.1p	L1	L1	L1FLnI	chr7	19223109	19233515	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC003986.1	ENSG00000229533	76856	AC007091.1	ENSG00000223838	120016	None	None
L1FLnI_7p21.1q	L1	L1	L1FLnI	chr7	19541789	19552201	-	noncoding	AC007091.1	lncRNA	ANTISENSE	ENSG00000223838	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.1r	L1	L1	L1FLnI	chr7	19589480	19598862	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TWISTNB	ENSG00000105849	96599	AC007091.1	ENSG00000223838	10874	None	None
L1FLnI_7p21.1s	L1	L1	L1FLnI	chr7	19623838	19633571	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007091.1	ENSG00000223838	45232	TWISTNB	ENSG00000105849	61890	None	None
L1FLnI_7p21.1t	L1	L1	L1FLnI	chr7	19877183	19887294	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC005062.1	ENSG00000243004	31687	AC004543.1	ENSG00000237921	59093	None	None
L1FLnI_7p21.1u	L1	L1	L1FLnI	chr7	19883470	19893609	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC005062.1	ENSG00000243004	25372	AC004543.1	ENSG00000237921	65380	None	None
L1FLnI_7p21.1v	L1	L1	L1FLnI	chr7	19900080	19910184	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC005062.1	ENSG00000243004	8797	AC004543.1	ENSG00000237921	81990	None	None
L1FLnI_7p21.1w	L1	L1	L1FLnI	chr7	19948222	19958335	-	coding	AC005062.1	lncRNA	SENSE	ENSG00000243004	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.1x	L1	L1	L1FLnI	chr7	20064311	20074450	+	coding	AC005062.1	lncRNA	ANTISENSE	ENSG00000243004	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p21.1y	L1	L1	L1FLnI	chr7	20491865	20501790	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ITGB8	ENSG00000105855	76111	EEF1A1P27	ENSG00000179460	80282	None	None
L1FLnI_7p21.1z	L1	L1	L1FLnI	chr7	20564063	20572979	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ITGB8	ENSG00000105855	148309	EEF1A1P27	ENSG00000179460	9093	None	None
L1FLnI_7p21.1aa	L1	L1	L1FLnI	chr7	20882928	20891673	-	coding	LINC01162	lncRNA	ANTISENSE	ENSG00000232790	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p15.3a	L1	L1	L1FLnI	chr7	20921860	20930417	-	noncoding	LINC01162	lncRNA	ANTISENSE	ENSG00000232790	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p15.3b	L1	L1	L1FLnI	chr7	21176146	21185675	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL542P	ENSG00000243633	29862	AC080068.1	ENSG00000285592	147333	None	chr7:21185593-21185597
L1FLnI_7p15.3c	L1	L1	L1FLnI	chr7	21338845	21349013	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-15P	ENSG00000195024	32350	ASS1P11	ENSG00000225308	117417	None	None
L1FLnI_7p15.3d	L1	L1	L1FLnI	chr7	22524798	22534831	+	coding	STEAP1B	protein_coding	ANTISENSE	ENSG00000105889	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p15.3e	L1	L1	L1FLnI	chr7	22731282	22742825	+	noncoding	IL6	protein_coding	SENSE	ENSG00000136244	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr7:22730922-22731289	chr7:22731433-22731480,chr7:22731597-22731611
L1FLnI_7p15.3f	L1	L1	L1FLnI	chr7	22920698	22930856	+	coding	FAM126A	protein_coding	ANTISENSE	ENSG00000122591	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:22923885-22924197	None
L1FLnI_7p15.3g	L1	L1	L1FLnI	chr7	23317560	23327574	+	coding	IGF2BP3	protein_coding	ANTISENSE	ENSG00000136231	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr7:23320641-23320645
L1FLnI_7p15.3h	L1	L1	L1FLnI	chr7	23317560	23327563	+	coding	IGF2BP3	protein_coding	ANTISENSE	ENSG00000136231	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr7:23320641-23320645
L1FLnI_7p15.3i	L1	L1	L1FLnI	chr7	23773280	23783790	-	noncoding	STK31	protein_coding	ANTISENSE	ENSG00000196335	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr7:23782986-23783379	None
L1FLnI_7p15.3j	L1	L1	L1FLnI	chr7	23822104	23832242	-	noncoding	STK31	protein_coding	ANTISENSE	ENSG00000196335	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p15.3k	L1	L1	L1FLnI	chr7	23943673	23953820	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC003087.1	ENSG00000227930	46338	RNA5SP228	ENSG00000252041	178885	None	None
L1FLnI_7p15.3l	L1	L1	L1FLnI	chr7	23982735	23991938	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC003087.1	ENSG00000227930	85400	RNA5SP228	ENSG00000252041	140767	None	None
L1FLnI_7p15.3m	L1	L1	L1FLnI	chr7	24272482	24282628	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NPY	ENSG00000122585	1560	AC004485.1	ENSG00000228944	16763	None	None
L1FLnI_7p15.3n	L1	L1	L1FLnI	chr7	24995773	25005913	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYCS	ENSG00000172115	112743	OSBPL3	ENSG00000070882	14139	None	None
L1FLnI_7p15.3o	L1	L1	L1FLnI	chr7	24995781	25005913	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYCS	ENSG00000172115	112743	OSBPL3	ENSG00000070882	14147	None	None
L1FLnI_7p15.3p	L1	L1	L1FLnI	chr7	25041362	25051391	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CYCS	ENSG00000172115	67265	OSBPL3	ENSG00000070882	59728	None	None
L1FLnI_7p15.2a	L1	L1	L1FLnI	chr7	25599535	25609549	+	coding	AC005165.1	lncRNA	ANTISENSE	ENSG00000223561	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p15.2b	L1	L1	L1FLnI	chr7	25740334	25750363	+	coding	AC005165.1	lncRNA	ANTISENSE	ENSG00000223561	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p15.2c	L1	L1	L1FLnI	chr7	26764351	26774411	-	noncoding	SKAP2	protein_coding	SENSE	ENSG00000005020	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p15.2d	L1	L1	L1FLnI	chr7	26928078	26936771	+	coding	SKAP2	protein_coding	ANTISENSE	ENSG00000005020	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p15.2e	L1	L1	L1FLnI	chr7	26967673	26977906	-	noncoding	SKAP2	protein_coding	SENSE	ENSG00000005020	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p15.2f	L1	L1	L1FLnI	chr7	27001947	27012095	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TPM3P4	ENSG00000214869	11642	SKAP2	ENSG00000005020	6708	None	None
L1FLnI_7p15.2g	L1	L1	L1FLnI	chr7	27501710	27511699	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HIBADH	ENSG00000106049	13743	AC073150.1	ENSG00000235574	8945	None	None
L1FLnI_7p15.1a	L1	L1	L1FLnI	chr7	27978498	27987129	+	coding	JAZF1	protein_coding	ANTISENSE	ENSG00000153814	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p15.1b	L1	L1	L1FLnI	chr7	28333957	28344726	-	noncoding	CREB5	protein_coding	ANTISENSE	ENSG00000146592	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.3a	L1	L1	L1FLnI	chr7	29043815	29052776	+	noncoding	CPVL	protein_coding	ANTISENSE	ENSG00000106066	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_7p14.3	L1	L1	L1ORF2	chr7	29578934	29586977	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PRR15	ENSG00000176532	11641	ZNRF2P2	ENSG00000225264	11818	None	None
L1FLnI_7p14.3b	L1	L1	L1FLnI	chr7	29724903	29734221	-	noncoding	DPY19L2P3	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000227855	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.3c	L1	L1	L1FLnI	chr7	30413977	30424003	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NOD1	ENSG00000106100	524	AC006978.2	ENSG00000281593	1475	None	None
L1FLI_7p14.3	L1	L1	L1FLI	chr7	30438242	30446292	+	coding	NOD1	protein_coding	ANTISENSE	ENSG00000106100	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.3d	L1	L1	L1FLnI	chr7	30534015	30544134	+	coding	AC005154.5,GARS-DT,AC005154.1	protein_coding,lncRNA,processed_pseudogene	ANTISENSE,ANTISENSE,SENSE	ENSG00000281039,ENSG00000196295,ENSG00000226874	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.3e	L1	L1	L1FLnI	chr7	30636310	30646330	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CRHR2	ENSG00000106113	5612	GARS1	ENSG00000106105	2277	None	None
L1FLnI_7p14.3f	L1	L1	L1FLnI	chr7	31139006	31150624	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006398.1	ENSG00000286487	52207	AC006466.1	ENSG00000232887	19434	None	None
L1FLnI_7p14.3g	L1	L1	L1FLnI	chr7	31139006	31147667	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006398.1	ENSG00000286487	55164	AC006466.1	ENSG00000232887	19434	None	None
L1FLnI_7p14.3h	L1	L1	L1FLnI	chr7	31500704	31510728	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ITPRID1	ENSG00000180347	3343	AC005090.1	ENSG00000231418	79401	None	None
L1FLnI_7p14.3i	L1	L1	L1FLnI	chr7	31607595	31616927	-	noncoding	ITPRID1	protein_coding	ANTISENSE	ENSG00000180347	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.3j	L1	L1	L1FLnI	chr7	31616118	31626282	+	coding	ITPRID1	protein_coding	SENSE	ENSG00000180347	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.3k	L1	L1	L1FLnI	chr7	31960470	31970652	+	coding	PDE1C	protein_coding	ANTISENSE	ENSG00000154678	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.3l	L1	L1	L1FLnI	chr7	32078385	32088514	+	coding	PDE1C	protein_coding	ANTISENSE	ENSG00000154678	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.3m	L1	L1	L1FLnI	chr7	32116002	32126359	+	coding	PDE1C	protein_coding	ANTISENSE	ENSG00000154678	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:32115791-32116163	None
L1FLnI_7p14.3n	L1	L1	L1FLnI	chr7	32304246	32314417	+	coding	PDE1C	protein_coding	ANTISENSE	ENSG00000154678	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.3o	L1	L1	L1FLnI	chr7	32461030	32471065	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC018641.1	ENSG00000226468	3272	SLC25A5P5	ENSG00000226421	448	chr7:32464341-32464521	None
L1FLnI_7p14.3p	L1	L1	L1FLnI	chr7	32682180	32692215	-	coding	DPY19L1P1	unprocessed_pseudogene	SENSE	ENSG00000229358	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.3q	L1	L1	L1FLnI	chr7	32697155	32707045	-	coding	DPY19L1P1	unprocessed_pseudogene	SENSE	ENSG00000229358	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.3r	L1	L1	L1FLnI	chr7	32704517	32714680	+	coding	DPY19L1P1	unprocessed_pseudogene	ANTISENSE	ENSG00000229358	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.3s	L1	L1	L1FLnI	chr7	33160627	33170512	-	coding	BBS9	protein_coding	ANTISENSE	ENSG00000122507	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.3t	L1	L1	L1FLnI	chr7	33521249	33531273	-	coding	BBS9	protein_coding	ANTISENSE	ENSG00000122507	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.3u	L1	L1	L1FLnI	chr7	33988121	33998136	-	coding	BMPER	protein_coding	ANTISENSE	ENSG00000164619	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.3v	L1	L1	L1FLnI	chr7	34169071	34179087	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC009262.1	ENSG00000236212	30378	BMPER	ENSG00000164619	12644	None	None
L1FLnI_7p14.3w	L1	L1	L1FLnI	chr7	34199715	34209777	-	coding	AC009262.1	lncRNA	ANTISENSE	ENSG00000236212	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.3x	L1	L1	L1FLnI	chr7	34199733	34209777	-	coding	AC009262.1	lncRNA	ANTISENSE	ENSG00000236212	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.3y	L1	L1	L1FLnI	chr7	34229063	34239398	-	noncoding	AC009262.1	lncRNA	ANTISENSE	ENSG00000236212	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.3z	L1	L1	L1FLnI	chr7	34427829	34437953	+	noncoding	NPSR1-AS1	lncRNA	ANTISENSE	ENSG00000197085	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.3aa	L1	L1	L1FLnI	chr7	34453445	34463836	+	coding	NPSR1-AS1	lncRNA	ANTISENSE	ENSG00000197085	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.3ba	L1	L1	L1FLnI	chr7	34548472	34559177	+	noncoding	NPSR1-AS1	lncRNA	ANTISENSE	ENSG00000197085	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.3ca	L1	L1	L1FLnI	chr7	34572299	34582460	+	coding	NPSR1-AS1	lncRNA	ANTISENSE	ENSG00000197085	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.3da	L1	L1	L1FLnI	chr7	34630836	34639504	+	noncoding	NPSR1-AS1	lncRNA	ANTISENSE	ENSG00000197085	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.3ea	L1	L1	L1FLnI	chr7	34810437	34820807	+	noncoding	NPSR1-AS1,NPSR1	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000197085,ENSG00000187258	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.2a	L1	L1	L1FLnI	chr7	34902741	34912752	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC004788.1	ENSG00000251802	10192	DPY19L1	ENSG00000173852	16124	None	None
L1FLnI_7p14.2b	L1	L1	L1FLnI	chr7	34902741	34912768	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC004788.1	ENSG00000251802	10192	DPY19L1	ENSG00000173852	16108	None	None
L1FLnI_7p14.2c	L1	L1	L1FLnI	chr7	35089459	35099472	+	coding	AC005400.1,DPY19L2P1	lncRNA,transcribed_unprocessed_pseudogene	SENSE,ANTISENSE	ENSG00000287249,ENSG00000189212	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.2d	L1	L1	L1FLnI	chr7	35148318	35158457	+	noncoding	DPY19L2P1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000189212	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.2e	L1	L1	L1FLnI	chr7	35659384	35668448	-	coding	HERPUD2	protein_coding	SENSE	ENSG00000122557	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.2f	L1	L1	L1FLnI	chr7	35738714	35748135	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SEPTIN7-AS1	ENSG00000228878	3721	AC018647.1	ENSG00000227544	3790	None	None
L1FLnI_7p14.2g	L1	L1	L1FLnI	chr7	36116457	36126650	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MARK2P13	ENSG00000228815	5585	AC078841.1	ENSG00000271117	20192	chr7:36118002-36118212	None
L1FLnI_7p14.2h	L1	L1	L1FLnI	chr7	36552470	36562626	-	coding	AOAH	protein_coding	SENSE	ENSG00000136250	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.1a	L1	L1	L1FLnI	chr7	37116665	37126796	+	coding	ELMO1,RPS17P13	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000155849,ENSG00000224706	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr7:37117384-37117693	None
L1FLnI_7p14.1b	L1	L1	L1FLnI	chr7	37116665	37126800	+	coding	ELMO1,RPS17P13	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000155849,ENSG00000224706	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr7:37117384-37117693	None
L1FLnI_7p14.1c	L1	L1	L1FLnI	chr7	37149668	37159811	+	coding	ELMO1	protein_coding	ANTISENSE	ENSG00000155849	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr7:37155485-37155487
L1FLnI_7p14.1d	L1	L1	L1FLnI	chr7	37162844	37172991	-	coding	ELMO1	protein_coding	SENSE	ENSG00000155849	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_7p14.1	L1	L1	L1ORF2	chr7	37611040	37619077	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GPR141	ENSG00000187037	64719	NECAP1P1	ENSG00000178503	24711	None	None
L1FLnI_7p14.1e	L1	L1	L1FLnI	chr7	37635834	37646229	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GPR141	ENSG00000187037	37567	NECAP1P1	ENSG00000178503	49505	chr7:37645334-37645437	None
L1FLnI_7p14.1f	L1	L1	L1FLnI	chr7	38043941	38053103	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	STARD3NL	ENSG00000010270	125119	SFRP4	ENSG00000106483	18246	None	None
L1FLnI_7p14.1g	L1	L1	L1FLnI	chr7	38043957	38053103	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	STARD3NL	ENSG00000010270	125119	SFRP4	ENSG00000106483	18262	None	None
L1FLnI_7p14.1h	L1	L1	L1FLnI	chr7	38148268	38156897	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SFRP4	ENSG00000106483	122573	STARD3NL	ENSG00000010270	21325	chr7:38149282-38149539	None
L1FLnI_7p14.1i	L1	L1	L1FLnI	chr7	38657172	38665768	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P20	ENSG00000227404	559	FAM183BP	ENSG00000164556	19578	chr7:38657107-38657240	None
L1FLnI_7p14.1j	L1	L1	L1FLnI	chr7	39007029	39017052	-	coding	POU6F2,POU6F2-AS2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000106536,ENSG00000233854	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.1k	L1	L1	L1FLnI	chr7	39961137	39970644	-	coding	CDK13	protein_coding	ANTISENSE	ENSG00000065883	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.1l	L1	L1	L1FLnI	chr7	40333262	40343392	-	coding	SUGCT	protein_coding	ANTISENSE	ENSG00000175600	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.1m	L1	L1	L1FLnI	chr7	40809758	40820212	-	coding	SUGCT	protein_coding	ANTISENSE	ENSG00000175600	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr7:40810957-40810977,chr7:40812767-40812778,chr7:40812784-40812789,chr7:40812993-40813005,chr7:40813043-40813048,chr7:40815625-40815640,chr7:40815647-40815676,chr7:40815680-40815687,chr7:40815700-40815722,chr7:40815742-40815749
L1FLnI_7p14.1n	L1	L1	L1FLnI	chr7	40928448	40938559	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01450	ENSG00000232458	26108	SUGCT	ENSG00000175600	67685	None	None
L1FLnI_7p14.1o	L1	L1	L1FLnI	chr7	40947978	40958090	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01450	ENSG00000232458	6577	SUGCT	ENSG00000175600	87215	None	None
L1FLnI_7p14.1p	L1	L1	L1FLnI	chr7	40954098	40963630	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01450	ENSG00000232458	1037	SUGCT	ENSG00000175600	93335	None	None
L1FLnI_7p14.1q	L1	L1	L1FLnI	chr7	42364946	42375076	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01448	ENSG00000238284	286640	GLI3	ENSG00000106571	127076	None	None
L1FLnI_7p14.1r	L1	L1	L1FLnI	chr7	42435041	42444187	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01448	ENSG00000238284	217529	GLI3	ENSG00000106571	197171	None	None
L1FLnI_7p14.1s	L1	L1	L1FLnI	chr7	42440925	42451032	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01448	ENSG00000238284	210684	GLI3	ENSG00000106571	203055	None	None
L1FLnI_7p14.1t	L1	L1	L1FLnI	chr7	42580075	42590252	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01448	ENSG00000238284	71464	GLI3	ENSG00000106571	342205	None	None
L1FLnI_7p14.1u	L1	L1	L1FLnI	chr7	42793456	42802841	+	coding	TCP1P1	unprocessed_pseudogene	SENSE	ENSG00000229161	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.1v	L1	L1	L1FLnI	chr7	42793456	42802824	+	coding	TCP1P1	unprocessed_pseudogene	SENSE	ENSG00000229161	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p14.1w	L1	L1	L1FLnI	chr7	42889282	42899529	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010132.1	ENSG00000231539	44844	AC010132.4	ENSG00000261019	1743	None	None
L1FLnI_7p14.1x	L1	L1	L1FLnI	chr7	43055598	43065616	+	coding	AC005537.2	lncRNA	ANTISENSE	ENSG00000232006	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p13a	L1	L1	L1FLnI	chr7	43772639	43782787	-	coding	BLVRA	protein_coding	ANTISENSE	ENSG00000106605	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:43782079-43782323	chr7:43782308-43782323
L1FLnI_7p13b	L1	L1	L1FLnI	chr7	45311784	45321919	+	coding	AC073968.2	lncRNA	SENSE	ENSG00000286738	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p13c	L1	L1	L1FLnI	chr7	45329058	45339519	+	noncoding	AC073968.2	lncRNA	SENSE	ENSG00000286738	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p13d	L1	L1	L1FLnI	chr7	45349363	45359906	+	noncoding	AC073968.2	lncRNA	SENSE	ENSG00000286738	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p13e	L1	L1	L1FLnI	chr7	45367213	45375732	-	noncoding	AC073968.2	lncRNA	ANTISENSE	ENSG00000286738	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p13f	L1	L1	L1FLnI	chr7	45377009	45387028	-	coding	AC073968.2	lncRNA	ANTISENSE	ENSG00000286738	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p12.3a	L1	L1	L1FLnI	chr7	45461941	45472140	-	coding	AC073325.1	lncRNA	ANTISENSE	ENSG00000225537	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p12.3b	L1	L1	L1FLnI	chr7	45488980	45499248	-	noncoding	AC073325.1	lncRNA	ANTISENSE	ENSG00000225537	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p12.3c	L1	L1	L1FLnI	chr7	45946921	45956920	-	coding	AC073115.2	lncRNA	ANTISENSE	ENSG00000237471	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p12.3d	L1	L1	L1FLnI	chr7	46011733	46021599	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073115.1	ENSG00000229628	10835	ZNF619P1	ENSG00000224547	123338	None	None
L1FLnI_7p12.3e	L1	L1	L1FLnI	chr7	46231371	46240609	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF619P1	ENSG00000224547	85683	AC023669.1	ENSG00000229459	20455	None	None
L1FLnI_7p12.3f	L1	L1	L1FLnI	chr7	46336571	46345359	-	coding	AC023669.2	lncRNA	ANTISENSE	ENSG00000237760	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p12.3g	L1	L1	L1FLnI	chr7	46587237	46597446	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC004869.1	ENSG00000230680	105659	HMGN1P19	ENSG00000224519	37168	None	None
L1FLnI_7p12.3h	L1	L1	L1FLnI	chr7	46718765	46730499	+	noncoding	AC011294.1	lncRNA	ANTISENSE	ENSG00000233539	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_7p12.3	L1	L1	L1ORF2	chr7	46818623	46826672	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	EPS15P1	ENSG00000242948	35180	AC004870.4	ENSG00000232072	63953	None	None
L1FLnI_7p12.3i	L1	L1	L1FLnI	chr7	47156177	47166294	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC004870.3	ENSG00000229192	77049	AC087175.1	ENSG00000286315	85845	chr7:47158891-47159291	None
L1FLnI_7p12.3j	L1	L1	L1FLnI	chr7	47913105	47922383	+	noncoding	PKD1L1	protein_coding	ANTISENSE	ENSG00000158683	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p12.3k	L1	L1	L1FLnI	chr7	48529422	48539483	-	noncoding	ABCA13	protein_coding	ANTISENSE	ENSG00000179869	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p12.3l	L1	L1	L1FLnI	chr7	48552186	48561212	-	noncoding	ABCA13	protein_coding	ANTISENSE	ENSG00000179869	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p12.3m	L1	L1	L1FLnI	chr7	48600729	48610997	-	noncoding	ABCA13	protein_coding	ANTISENSE	ENSG00000179869	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p12.3n	L1	L1	L1FLnI	chr7	48681446	48691589	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC091770.1	ENSG00000228173	11967	LINC02838	ENSG00000285536	16738	None	None
L1FLnI_7p12.2a	L1	L1	L1FLnI	chr7	49034804	49044922	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDC14C	ENSG00000218305	107350	AC091730.1	ENSG00000234686	185215	None	None
L1FLnI_7p12.2b	L1	L1	L1FLnI	chr7	49234576	49243267	-	noncoding	AC091730.1	lncRNA	ANTISENSE	ENSG00000234686	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p12.2c	L1	L1	L1FLnI	chr7	49646240	49656389	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092448.1	ENSG00000286995	59075	AC093775.1	ENSG00000279104	104508	None	None
L1FLnI_7p12.2d	L1	L1	L1FLnI	chr7	49646240	49656373	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092448.1	ENSG00000286995	59075	AC093775.1	ENSG00000279104	104524	None	None
L1FLI_7p12.2	L1	L1	L1FLI	chr7	49679258	49687303	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093775.1	ENSG00000279104	73594	AC092448.1	ENSG00000286995	92093	None	None
L1FLnI_7p12.2e	L1	L1	L1FLnI	chr7	50067577	50079044	+	noncoding	ZPBP	protein_coding	ANTISENSE	ENSG00000042813	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p12.1a	L1	L1	L1FLnI	chr7	50509464	50518427	+	noncoding	FIGNL1,DDC	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000132436,ENSG00000132437	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:50512191-50512499	None
L1FLnI_7p12.1b	L1	L1	L1FLnI	chr7	50570343	50580476	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRB10	ENSG00000106070	9587	DDC	ENSG00000132437	4938	None	chr7:50579334-50579337
L1FLnI_7p12.1c	L1	L1	L1FLnI	chr7	50868712	50877383	+	coding	AC004830.2	lncRNA	SENSE	ENSG00000228204	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:50869439-50869652	None
L1FLnI_7p12.1d	L1	L1	L1FLnI	chr7	50883429	50892166	+	coding	AC004830.2	lncRNA	SENSE	ENSG00000228204	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p12.1e	L1	L1	L1FLnI	chr7	50895344	50905374	+	coding	AC004830.2	lncRNA	SENSE	ENSG00000228204	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p12.1f	L1	L1	L1FLnI	chr7	50943114	50951625	+	coding	AC004830.2	lncRNA	SENSE	ENSG00000228204	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p12.1g	L1	L1	L1FLnI	chr7	51193453	51202031	-	noncoding	COBL	protein_coding	SENSE	ENSG00000106078	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p12.1h	L1	L1	L1FLnI	chr7	51507001	51515605	-	noncoding	AC005999.2	lncRNA	ANTISENSE	ENSG00000285741	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p12.1i	L1	L1	L1FLnI	chr7	51551629	51561791	-	noncoding	AC005999.2	lncRNA	ANTISENSE	ENSG00000285741	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p12.1j	L1	L1	L1FLnI	chr7	51551639	51561791	-	noncoding	AC005999.2	lncRNA	ANTISENSE	ENSG00000285741	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p12.1k	L1	L1	L1FLnI	chr7	51571665	51581474	-	noncoding	AC005999.2	lncRNA	ANTISENSE	ENSG00000285741	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p12.1l	L1	L1	L1FLnI	chr7	51593512	51603647	-	noncoding	AC005999.2,ROBO2P1	lncRNA,processed_pseudogene	ANTISENSE,SENSE	ENSG00000285741,ENSG00000229478	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p12.1m	L1	L1	L1FLnI	chr7	51832974	51842989	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC006478.2	ENSG00000287039	6097	AC006478.1	ENSG00000286987	51812	None	None
L1FLnI_7p12.1n	L1	L1	L1FLnI	chr7	51886411	51896441	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC006478.2	ENSG00000287039	21613	AC079763.1	ENSG00000233960	268794	None	None
L1FLnI_7p12.1o	L1	L1	L1FLnI	chr7	51931466	51940002	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079763.1	ENSG00000233960	225233	AC006478.2	ENSG00000287039	66668	None	None
L1FLnI_7p12.1p	L1	L1	L1FLnI	chr7	52393651	52404267	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC006459.1	ENSG00000286908	88885	AC006320.1	ENSG00000253028	124082	None	None
L1FLnI_7p12.1q	L1	L1	L1FLnI	chr7	52862739	52871587	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006459.1	ENSG00000286908	359305	SGO1P2	ENSG00000234304	20250	None	None
L1FLnI_7p12.1r	L1	L1	L1FLnI	chr7	53025823	53035836	-	coding	POM121L12	protein_coding	ANTISENSE	ENSG00000221900	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr7:53035627-53035657
L1FLnI_7p12.1s	L1	L1	L1FLnI	chr7	53281940	53291971	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNF138P2	ENSG00000271194	24178	HAUS6P1	ENSG00000227344	93002	None	None
L1FLnI_7p12.1t	L1	L1	L1FLnI	chr7	53662085	53671221	-	noncoding	LINC01446	lncRNA	SENSE	ENSG00000205628	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p12.1u	L1	L1	L1FLnI	chr7	53662085	53671219	-	noncoding	LINC01446	lncRNA	SENSE	ENSG00000205628	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p12.1v	L1	L1	L1FLnI	chr7	53740167	53750862	+	noncoding	LINC01446	lncRNA	ANTISENSE	ENSG00000205628	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p12.1w	L1	L1	L1FLnI	chr7	53866583	53875615	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HAUS6P3	ENSG00000235454	3244	LINC02854	ENSG00000238131	51061	None	None
L1FLnI_7p12.1x	L1	L1	L1FLnI	chr7	53866583	53875381	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HAUS6P3	ENSG00000235454	3244	LINC02854	ENSG00000238131	51295	None	None
L1FLnI_7p11.2a	L1	L1	L1FLnI	chr7	54040801	54050968	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092848.2	ENSG00000287953	134103	LINC02854	ENSG00000238131	92997	None	None
L1FLnI_7p11.2b	L1	L1	L1FLnI	chr7	54214627	54223293	+	noncoding	AC092848.2	lncRNA	ANTISENSE	ENSG00000287953	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p11.2c	L1	L1	L1FLnI	chr7	54319117	54327773	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01445	ENSG00000231427	2897	AC092848.2	ENSG00000287953	61540	None	None
L1FLnI_7p11.2d	L1	L1	L1FLnI	chr7	54402764	54411870	-	noncoding	LINC01445	lncRNA	ANTISENSE	ENSG00000231427	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p11.2e	L1	L1	L1FLnI	chr7	54498234	54508384	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	VSTM2A	ENSG00000170419	33941	LINC01445	ENSG00000231427	43141	None	None
L1FLnI_7p11.2f	L1	L1	L1FLnI	chr7	54509161	54519559	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VSTM2A	ENSG00000170419	22766	LINC01445	ENSG00000231427	54068	None	None
L1FLnI_7p11.2g	L1	L1	L1FLnI	chr7	54923017	54933526	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074351.1	ENSG00000234707	110290	AC006971.1	ENSG00000218586	173	chr7:54925749-54926104,chr7:54933230-54933511	None
L1FLnI_7p11.2h	L1	L1	L1FLnI	chr7	54923017	54933525	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC074351.1	ENSG00000234707	110290	AC006971.1	ENSG00000218586	174	chr7:54925749-54926104,chr7:54933230-54933511	None
L1FLnI_7p11.2i	L1	L1	L1FLnI	chr7	55289152	55298770	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073347.1	ENSG00000230936	43546	CALM1P2	ENSG00000230564	28896	None	None
L1FLnI_7p11.2j	L1	L1	L1FLnI	chr7	55576690	55586813	-	noncoding	AC099681.1	lncRNA	ANTISENSE	ENSG00000223475	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p11.2k	L1	L1	L1FLnI	chr7	56308054	56318180	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093392.1	ENSG00000203462	4624	AC073136.2	ENSG00000224155	2528	None	None
L1FLnI_7p11.2l	L1	L1	L1FLnI	chr7	56505921	56516058	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092447.3	ENSG00000223740	9370	NMD3P2	ENSG00000231504	2877	None	None
L1FLnI_7p11.2m	L1	L1	L1FLnI	chr7	56581298	56591324	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092447.6	ENSG00000234716	2432	AC092447.1	ENSG00000213067	6055	None	None
L1FLnI_7p11.2n	L1	L1	L1FLnI	chr7	56650576	56659089	+	noncoding	AC095038.1	unprocessed_pseudogene	ANTISENSE	ENSG00000228303	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr7:56658729-56659150	None
L1FLnI_7p11.2o	L1	L1	L1FLnI	chr7	56837916	56848025	-	coding	AC118758.3	lncRNA	SENSE	ENSG00000279072	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7p11.2p	L1	L1	L1FLnI	chr7	57033033	57043052	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC29A4P1	ENSG00000214668	12760	PHKG1P4	ENSG00000229508	17538	None	None
L1FLnI_7q11.1a	L1	L1	L1FLnI	chr7	60956980	60967132	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023141.7	ENSG00000231484	3119934	AC128676.1	ENSG00000233918	1308229	None	None
L1FLnI_7q11.1b	L1	L1	L1FLnI	chr7	60956980	60967119	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023141.7	ENSG00000231484	3119934	AC128676.1	ENSG00000233918	1308242	None	None
L1FLnI_7q11.1c	L1	L1	L1FLnI	chr7	61781847	61790594	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC128676.1	ENSG00000233918	484767	AC023141.7	ENSG00000231484	3944801	None	None
L1FLnI_7q11.1d	L1	L1	L1FLnI	chr7	61837502	61847554	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC128676.1	ENSG00000233918	427807	AC023141.7	ENSG00000231484	4000456	None	None
L1FLnI_7q11.1e	L1	L1	L1FLnI	chr7	61837527	61847554	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC128676.1	ENSG00000233918	427807	AC023141.7	ENSG00000231484	4000481	None	None
L1FLnI_7q11.21a	L1	L1	L1FLnI	chr7	62194063	62202812	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC128676.1	ENSG00000233918	72549	AC023141.7	ENSG00000231484	4357017	None	None
L1FLnI_7q11.21b	L1	L1	L1FLnI	chr7	62265219	62274182	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC128676.1	ENSG00000233918	1179	AC023141.7	ENSG00000231484	4428173	None	None
L1FLnI_7q11.21c	L1	L1	L1FLnI	chr7	62265232	62274182	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC128676.1	ENSG00000233918	1179	AC023141.7	ENSG00000231484	4428186	None	None
L1FLnI_7q11.21d	L1	L1	L1FLnI	chr7	62663369	62673506	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC128676.1	ENSG00000233918	387691	RNU6-417P	ENSG00000207443	337957	None	None
L1FLnI_7q11.21e	L1	L1	L1FLnI	chr7	62736301	62746019	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-417P	ENSG00000207443	265444	AC128676.1	ENSG00000233918	460623	None	None
L1FLnI_7q11.21f	L1	L1	L1FLnI	chr7	62855409	62865426	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC128676.1	ENSG00000233918	579731	RNU6-417P	ENSG00000207443	146037	None	None
L1FLnI_7q11.21g	L1	L1	L1FLnI	chr7	62908382	62918486	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-417P	ENSG00000207443	92977	AC128676.1	ENSG00000233918	632704	None	None
L1FLnI_7q11.21h	L1	L1	L1FLnI	chr7	62992714	63002844	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-417P	ENSG00000207443	8619	AC128676.1	ENSG00000233918	717036	None	None
L1FLI_7q11.21	L1	L1	L1FLI	chr7	63147817	63155861	-	coding	SEPTIN14P1	unprocessed_pseudogene	SENSE	ENSG00000231523	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q11.21i	L1	L1	L1FLnI	chr7	63335110	63344055	-	noncoding	AC006455.1,ARAFP3	lncRNA,processed_pseudogene	SENSE,ANTISENSE	ENSG00000226587,ENSG00000227298	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q11.21j	L1	L1	L1FLnI	chr7	63404067	63413012	+	noncoding	AC073188.2,ARAFP2	lncRNA,processed_pseudogene	SENSE,ANTISENSE	ENSG00000227305,ENSG00000224368	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q11.21k	L1	L1	L1FLnI	chr7	63533784	63543807	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC29A4P2	ENSG00000214660	12791	PHKG1P2	ENSG00000228645	23619	None	None
L1FLnI_7q11.21l	L1	L1	L1FLnI	chr7	63728966	63738932	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC079355.1	ENSG00000226411	28525	CICP24	ENSG00000271466	29325	None	None
L1FLnI_7q11.21m	L1	L1	L1FLnI	chr7	63938564	63948274	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARAFP1	ENSG00000231264	55	AC092634.7	ENSG00000284534	11570	None	None
L1FLnI_7q11.21n	L1	L1	L1FLnI	chr7	64006757	64016044	-	coding	AC115220.1	protein_coding	ANTISENSE	ENSG00000241149	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q11.21o	L1	L1	L1FLnI	chr7	64006762	64016044	-	coding	AC115220.1	protein_coding	ANTISENSE	ENSG00000241149	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q11.21p	L1	L1	L1FLnI	chr7	64060115	64068632	-	noncoding	AC115220.2,ZNF727	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000285544,ENSG00000214652	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q11.21q	L1	L1	L1FLnI	chr7	64157035	64167133	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GUSBP6	ENSG00000224458	6314	VN1R38P	ENSG00000235227	12873	None	None
L1FLnI_7q11.21r	L1	L1	L1FLnI	chr7	65411294	65421380	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF92	ENSG00000146757	10159	AC114501.3	ENSG00000238124	41691	None	None
L1FLnI_7q11.21s	L1	L1	L1FLnI	chr7	65463958	65474084	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC114501.1	ENSG00000226767	34689	AC114501.3	ENSG00000238124	520	None	chr7:65472027-65472037
L1FLnI_7q11.21t	L1	L1	L1FLnI	chr7	65463996	65474084	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC114501.1	ENSG00000226767	34689	AC114501.3	ENSG00000238124	558	None	chr7:65472027-65472037
L1FLnI_7q11.21u	L1	L1	L1FLnI	chr7	65476785	65486933	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC114501.3	ENSG00000238124	13347	AC114501.1	ENSG00000226767	21840	None	None
L1FLnI_7q11.21v	L1	L1	L1FLnI	chr7	66286355	66296384	-	coding	TPST1	protein_coding	ANTISENSE	ENSG00000169902	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q11.22a	L1	L1	L1FLnI	chr7	70193830	70203857	+	coding	AUTS2	protein_coding	SENSE	ENSG00000158321	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q11.22b	L1	L1	L1FLnI	chr7	70834551	70844815	+	coding	AC073873.1	processed_pseudogene	SENSE	ENSG00000236978	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q11.22c	L1	L1	L1FLnI	chr7	72138517	72148604	+	noncoding	CALN1	protein_coding	ANTISENSE	ENSG00000183166	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q11.23a	L1	L1	L1FLnI	chr7	76560700	76570855	-	noncoding	AC004980.1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000205485	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q11.23b	L1	L1	L1FLnI	chr7	76724987	76735013	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC004980.2	ENSG00000214243	74090	AC006972.1	ENSG00000285666	83364	None	None
L1FLnI_7q11.23c	L1	L1	L1FLnI	chr7	76812052	76820700	-	noncoding	AC006972.1	lncRNA	SENSE	ENSG00000285666	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q11.23d	L1	L1	L1FLnI	chr7	77084015	77094184	-	coding	AC007000.4,FAM185BP	lncRNA,transcribed_unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000259628,ENSG00000214439	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q11.23e	L1	L1	L1FLnI	chr7	77141948	77152058	-	coding	AC007000.4,CCDC146	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000259628,ENSG00000135205	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.11a	L1	L1	L1FLnI	chr7	78268294	78278899	-	coding	MAGI2	protein_coding	SENSE	ENSG00000187391	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr7:78276082-78276088
L1FLnI_7q21.11b	L1	L1	L1FLnI	chr7	78285086	78294584	+	coding	MAGI2	protein_coding	ANTISENSE	ENSG00000187391	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.11c	L1	L1	L1FLnI	chr7	78854769	78864859	-	noncoding	MAGI2	protein_coding	SENSE	ENSG00000187391	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.11d	L1	L1	L1FLnI	chr7	78884247	78894389	+	coding	MAGI2	protein_coding	ANTISENSE	ENSG00000187391	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.11e	L1	L1	L1FLnI	chr7	78971357	78979896	+	noncoding	MAGI2	protein_coding	ANTISENSE	ENSG00000187391	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.11f	L1	L1	L1FLnI	chr7	79065064	79073979	-	noncoding	MAGI2	protein_coding	SENSE	ENSG00000187391	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.11g	L1	L1	L1FLnI	chr7	79229296	79239311	-	coding	MAGI2	protein_coding	SENSE	ENSG00000187391	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.11h	L1	L1	L1FLnI	chr7	79642776	79652253	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP234	ENSG00000200786	1856	NUP35P2	ENSG00000226285	97923	None	None
L1FLnI_7q21.11i	L1	L1	L1FLnI	chr7	79642818	79652253	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP234	ENSG00000200786	1856	NUP35P2	ENSG00000226285	97965	None	None
L1FLnI_7q21.11j	L1	L1	L1FLnI	chr7	79751544	79760774	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GNAI1	ENSG00000127955	7254	AC073048.1	ENSG00000287488	76529	None	None
L1FLnI_7q21.11k	L1	L1	L1FLnI	chr7	79911579	79920214	+	noncoding	GNAI1,RNU6-849P	protein_coding,snRNA	SENSE,ANTISENSE	ENSG00000127955,ENSG00000206818	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.11l	L1	L1	L1FLnI	chr7	79927969	79937389	-	noncoding	GNAI1	protein_coding	ANTISENSE	ENSG00000127955	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.11m	L1	L1	L1FLnI	chr7	79940593	79950736	-	coding	GNAI1	protein_coding	ANTISENSE	ENSG00000127955	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.11n	L1	L1	L1FLnI	chr7	80016333	80026717	+	coding	GNAI1	protein_coding	SENSE	ENSG00000127955	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr7:80026256-80026260
L1FLnI_7q21.11o	L1	L1	L1FLnI	chr7	80560881	80569866	-	noncoding	CD36	protein_coding	ANTISENSE	ENSG00000135218	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.11p	L1	L1	L1FLnI	chr7	80560888	80569866	-	noncoding	CD36	protein_coding	ANTISENSE	ENSG00000135218	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.11q	L1	L1	L1FLnI	chr7	80685250	80695619	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CD36	ENSG00000135218	5973	SEMA3C	ENSG00000075223	46919	None	None
L1FLnI_7q21.11r	L1	L1	L1FLnI	chr7	80709607	80719645	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CD36	ENSG00000135218	30330	SEMA3C	ENSG00000075223	22893	None	None
L1FLnI_7q21.11s	L1	L1	L1FLnI	chr7	81445960	81455416	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004866.2	ENSG00000224134	13164	EIF4EP4	ENSG00000232968	7620	None	None
L1FLnI_7q21.11t	L1	L1	L1FLnI	chr7	81823580	81833672	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CACNA2D1	ENSG00000153956	112772	HGF	ENSG00000019991	53142	None	None
L1FLnI_7q21.11u	L1	L1	L1FLnI	chr7	82579204	82587804	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTHFD2P5	ENSG00000213530	2044	CACNA2D1	ENSG00000153956	135427	None	None
L1FLnI_7q21.11v	L1	L1	L1FLnI	chr7	83020598	83030624	+	coding	PCLO	protein_coding	ANTISENSE	ENSG00000186472	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.11w	L1	L1	L1FLnI	chr7	83272062	83283772	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079799.1	ENSG00000235503	71382	PCLO	ENSG00000186472	109132	None	None
L1FLnI_7q21.11x	L1	L1	L1FLnI	chr7	83337816	83348249	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PCLO	ENSG00000186472	174886	AC079799.1	ENSG00000235503	6905	None	None
L1FLnI_7q21.11y	L1	L1	L1FLnI	chr7	83623262	83633742	-	noncoding	SEMA3E	protein_coding	SENSE	ENSG00000170381	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.11z	L1	L1	L1FLnI	chr7	83710928	83721024	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SEMA3A	ENSG00000075213	234753	RAD23BP2	ENSG00000230244	46303	None	None
L1FLnI_7q21.11aa	L1	L1	L1FLnI	chr7	83743244	83752811	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SEMA3A	ENSG00000075213	202966	RAD23BP2	ENSG00000230244	78619	None	None
L1FLnI_7q21.11ba	L1	L1	L1FLnI	chr7	83988827	83998842	-	coding	SEMA3A	protein_coding	SENSE	ENSG00000075213	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.11ca	L1	L1	L1FLnI	chr7	84049213	84059230	-	coding	SEMA3A	protein_coding	SENSE	ENSG00000075213	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:84058729-84059025	None
L1FLnI_7q21.11da	L1	L1	L1FLnI	chr7	84058911	84068936	+	coding	SEMA3A	protein_coding	ANTISENSE	ENSG00000075213	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr7:84058729-84059025,chr7:84060799-84061059	None
L1FLnI_7q21.11ea	L1	L1	L1FLnI	chr7	84240143	84249078	-	noncoding	SEMA3A	protein_coding	SENSE	ENSG00000075213	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:84248356-84248553,chr7:84248736-84249108	None
L1FLnI_7q21.11fa	L1	L1	L1FLnI	chr7	84399453	84409555	+	coding	SEMA3A	protein_coding	ANTISENSE	ENSG00000075213	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.11ga	L1	L1	L1FLnI	chr7	84399453	84409554	+	coding	SEMA3A	protein_coding	ANTISENSE	ENSG00000075213	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.11ha	L1	L1	L1FLnI	chr7	84514241	84522917	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SEMA3A	ENSG00000075213	21517	RPL7P30	ENSG00000227982	5205	None	None
L1FLnI_7q21.11ia	L1	L1	L1FLnI	chr7	84552447	84562159	+	noncoding	AC003984.1	lncRNA	SENSE	ENSG00000235139	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.11ja	L1	L1	L1FLnI	chr7	84552447	84562185	+	noncoding	AC003984.1	lncRNA	SENSE	ENSG00000235139	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.11ka	L1	L1	L1FLnI	chr7	84744735	84753435	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC003984.1	ENSG00000235139	160413	AC093716.1	ENSG00000235243	94442	None	None
L1FLnI_7q21.11la	L1	L1	L1FLnI	chr7	84986942	84997091	-	coding	SEMA3D	protein_coding	SENSE	ENSG00000153993	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.11ma	L1	L1	L1FLnI	chr7	85246356	85256379	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SEMA3D	ENSG00000153993	59501	DYNLL1P7	ENSG00000230614	124739	None	None
L1FLnI_7q21.11na	L1	L1	L1FLnI	chr7	85329189	85339239	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DYNLL1P7	ENSG00000230614	41879	SEMA3D	ENSG00000153993	142334	None	None
L1FLnI_7q21.11oa	L1	L1	L1FLnI	chr7	85329218	85339239	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DYNLL1P7	ENSG00000230614	41879	SEMA3D	ENSG00000153993	142363	None	None
L1FLnI_7q21.11pa	L1	L1	L1FLnI	chr7	85362974	85372379	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DYNLL1P7	ENSG00000230614	8739	SEMA3D	ENSG00000153993	176119	None	None
L1FLnI_7q21.11qa	L1	L1	L1FLnI	chr7	85862771	85873103	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092013.1	ENSG00000227785	226427	SOCS5P1	ENSG00000236610	343682	None	None
L1FLnI_7q21.11ra	L1	L1	L1FLnI	chr7	85872284	85881081	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092013.1	ENSG00000227785	235940	SOCS5P1	ENSG00000236610	335704	None	None
L1FLnI_7q21.11sa	L1	L1	L1FLnI	chr7	86170547	86180606	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092013.1	ENSG00000227785	534203	SOCS5P1	ENSG00000236610	36179	None	None
L1FLnI_7q21.11ta	L1	L1	L1FLnI	chr7	86336710	86346733	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SOCS5P1	ENSG00000236610	118977	GRM3	ENSG00000198822	297181	None	None
L1FLnI_7q21.11ua	L1	L1	L1FLnI	chr7	86371899	86381499	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SOCS5P1	ENSG00000236610	154166	GRM3	ENSG00000198822	262415	None	None
L1FLnI_7q21.11va	L1	L1	L1FLnI	chr7	86527569	86536656	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRM3	ENSG00000198822	107258	SOCS5P1	ENSG00000236610	309836	None	None
L1FLnI_7q21.11wa	L1	L1	L1FLnI	chr7	86563567	86573814	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SOCS5P1	ENSG00000236610	345834	GRM3	ENSG00000198822	70100	None	None
L1FLnI_7q21.12a	L1	L1	L1FLnI	chr7	87036258	87046268	+	coding	KIAA1324L	protein_coding	ANTISENSE	ENSG00000164659	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.12b	L1	L1	L1FLnI	chr7	87235225	87244661	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM243	ENSG00000135185	14638	TP53TG1	ENSG00000182165	78282	None	None
L1FLnI_7q21.12c	L1	L1	L1FLnI	chr7	87257375	87267480	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TP53TG1	ENSG00000182165	55463	TMEM243	ENSG00000135185	36788	None	None
L1FLnI_7q21.12d	L1	L1	L1FLnI	chr7	87483225	87491926	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ABCB4	ENSG00000005471	2790	ABCB1	ENSG00000085563	11091	None	None
L1FLnI_7q21.12e	L1	L1	L1FLnI	chr7	87665045	87676504	-	noncoding	ABCB1,RUNDC3B	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000085563,ENSG00000105784	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.12f	L1	L1	L1FLnI	chr7	87949639	87959779	-	coding	ADAM22	protein_coding	ANTISENSE	ENSG00000008277	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.12g	L1	L1	L1FLnI	chr7	88073866	88083995	+	coding	ADAM22	protein_coding	SENSE	ENSG00000008277	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.13a	L1	L1	L1FLnI	chr7	88550527	88560560	-	coding	AC002069.2	lncRNA	ANTISENSE	ENSG00000233420	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.13b	L1	L1	L1FLnI	chr7	88550537	88560560	-	coding	AC002069.2	lncRNA	ANTISENSE	ENSG00000233420	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.13c	L1	L1	L1FLnI	chr7	88588045	88597769	+	noncoding	AC002069.2	lncRNA	SENSE	ENSG00000233420	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.13d	L1	L1	L1FLnI	chr7	88670424	88679881	+	noncoding	AC002069.2	lncRNA	SENSE	ENSG00000233420	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.13e	L1	L1	L1FLnI	chr7	88974151	88983565	-	noncoding	ZNF804B	protein_coding	ANTISENSE	ENSG00000182348	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.13f	L1	L1	L1FLnI	chr7	89016978	89025821	-	noncoding	ZNF804B	protein_coding	ANTISENSE	ENSG00000182348	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.13g	L1	L1	L1FLnI	chr7	89536290	89545623	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC002383.1	ENSG00000227863	39372	RNU6-274P	ENSG00000239075	208997	None	None
L1FLnI_7q21.13h	L1	L1	L1FLnI	chr7	89690599	89701712	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC002383.1	ENSG00000227863	193681	RNU6-274P	ENSG00000239075	52908	None	None
L1FLnI_7q21.13i	L1	L1	L1FLnI	chr7	89692386	89701712	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC002383.1	ENSG00000227863	195468	RNU6-274P	ENSG00000239075	52908	None	None
L1FLnI_7q21.13j	L1	L1	L1FLnI	chr7	89793426	89802675	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STEAP2-AS1	ENSG00000227646	79678	RNU6-274P	ENSG00000239075	38700	None	None
L1FLnI_7q21.13k	L1	L1	L1FLnI	chr7	89802232	89811590	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STEAP2-AS1	ENSG00000227646	70763	RNU6-274P	ENSG00000239075	47506	None	None
L1FLnI_7q21.13l	L1	L1	L1FLnI	chr7	89896411	89905807	-	coding	STEAP2-AS1	lncRNA	SENSE	ENSG00000227646	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.13m	L1	L1	L1FLnI	chr7	89896422	89905807	-	coding	STEAP2-AS1	lncRNA	SENSE	ENSG00000227646	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.13n	L1	L1	L1FLnI	chr7	90019125	90029080	+	noncoding	STEAP2-AS1	lncRNA	ANTISENSE	ENSG00000227646	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.13o	L1	L1	L1FLnI	chr7	90083125	90092411	+	noncoding	STEAP2-AS1	lncRNA	ANTISENSE	ENSG00000227646	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.13p	L1	L1	L1FLnI	chr7	90358656	90368778	-	noncoding	GTPBP10	protein_coding	ANTISENSE	ENSG00000105793	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.13q	L1	L1	L1FLnI	chr7	90544917	90553420	-	coding	CDK14	protein_coding	ANTISENSE	ENSG00000058091	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.13r	L1	L1	L1FLnI	chr7	90633636	90643772	-	coding	CDK14	protein_coding	ANTISENSE	ENSG00000058091	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.13s	L1	L1	L1FLnI	chr7	90729376	90739781	-	coding	CDK14	protein_coding	ANTISENSE	ENSG00000058091	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr7:90736373-90736377
L1FLnI_7q21.13t	L1	L1	L1FLnI	chr7	90747400	90756124	+	noncoding	CDK14	protein_coding	SENSE	ENSG00000058091	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.13u	L1	L1	L1FLnI	chr7	90802992	90813130	+	coding	CDK14	protein_coding	SENSE	ENSG00000058091	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.13v	L1	L1	L1FLnI	chr7	90876291	90886547	+	noncoding	CDK14	protein_coding	SENSE	ENSG00000058091	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.13w	L1	L1	L1FLnI	chr7	90877409	90886547	+	noncoding	CDK14	protein_coding	SENSE	ENSG00000058091	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.13x	L1	L1	L1FLnI	chr7	91055912	91066050	-	coding	CDK14	protein_coding	ANTISENSE	ENSG00000058091	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.13y	L1	L1	L1FLnI	chr7	91067737	91078171	+	coding	CDK14	protein_coding	SENSE	ENSG00000058091	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.13z	L1	L1	L1FLnI	chr7	91169945	91180017	+	coding	CDK14	protein_coding	SENSE	ENSG00000058091	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.13aa	L1	L1	L1FLnI	chr7	91252245	91261129	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FZD1	ENSG00000157240	3304	CDK14	ENSG00000058091	41655	None	None
L1FLnI_7q21.13ba	L1	L1	L1FLnI	chr7	91388995	91399009	-	coding	AC079760.2,AC079760.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000243144,ENSG00000235450	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.13ca	L1	L1	L1FLnI	chr7	91476186	91486319	-	coding	AC079760.2,AC079760.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000243144,ENSG00000235450	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.2a	L1	L1	L1FLnI	chr7	91503238	91513367	+	coding	AC079760.2,AC079760.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000243144,ENSG00000235450	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:91513173-91513187	None
L1FLnI_7q21.2b	L1	L1	L1FLnI	chr7	91579789	91589800	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC079760.1	ENSG00000235450	22941	AC000058.1	ENSG00000223665	49047	None	chr7:91579984-91580024
L1FLnI_7q21.2c	L1	L1	L1FLnI	chr7	91586152	91596294	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079760.1	ENSG00000235450	29304	AC000058.1	ENSG00000223665	42553	None	None
L1FLnI_7q21.2d	L1	L1	L1FLnI	chr7	91735431	91746818	-	noncoding	MTERF1	protein_coding	SENSE	ENSG00000127989	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.2e	L1	L1	L1FLnI	chr7	91737642	91746818	-	noncoding	MTERF1	protein_coding	SENSE	ENSG00000127989	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.2f	L1	L1	L1FLnI	chr7	91755250	91765685	+	noncoding	MTERF1	protein_coding	ANTISENSE	ENSG00000127989	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.2g	L1	L1	L1FLnI	chr7	91755699	91765685	+	noncoding	MTERF1	protein_coding	ANTISENSE	ENSG00000127989	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.2h	L1	L1	L1FLnI	chr7	91818493	91827893	-	noncoding	MTERF1	protein_coding	SENSE	ENSG00000127989	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr7:91826711-91826876	None
L1FLnI_7q21.2i	L1	L1	L1FLnI	chr7	91903184	91913206	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AKAP9	ENSG00000127914	27661	AC003086.1	ENSG00000287672	16694	None	None
L1FLnI_7q21.2j	L1	L1	L1FLnI	chr7	92183258	92193378	-	coding	AC000120.4	protein_coding	SENSE	ENSG00000285953	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:92191689-92192070	None
L1FLnI_7q21.2k	L1	L1	L1FLnI	chr7	92376276	92386390	+	noncoding	ANKIB1	protein_coding	SENSE	ENSG00000001629	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:92386022-92386064	chr7:92386022-92386032
L1FLnI_7q21.2l	L1	L1	L1FLnI	chr7	92892239	92902663	-	noncoding	CDK6-AS1	lncRNA	ANTISENSE	ENSG00000237819	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.2m	L1	L1	L1FLnI	chr7	92918736	92928860	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL7P	ENSG00000266794	42142	CDK6-AS1	ENSG00000237819	1549	None	None
L1FLnI_7q21.2n	L1	L1	L1FLnI	chr7	93073130	93083027	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL7P	ENSG00000266794	101831	SAMD9	ENSG00000205413	16486	None	None
L1FLnI_7q21.2o	L1	L1	L1FLnI	chr7	93104837	93114946	+	noncoding	SAMD9	protein_coding	ANTISENSE	ENSG00000205413	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr7:93105164-93105181
L1FLnI_7q21.2p	L1	L1	L1FLnI	chr7	93118050	93128002	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SAMD9	ENSG00000205413	27	SAMD9L	ENSG00000177409	2054	None	chr7:93118117-93118130,chr7:93118148-93118163
L1FLnI_7q21.3a	L1	L1	L1FLnI	chr7	93338466	93348480	+	coding	VPS50	protein_coding	SENSE	ENSG00000004766	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.3b	L1	L1	L1FLnI	chr7	93586404	93595267	-	coding	GNGT1	protein_coding	ANTISENSE	ENSG00000127928	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.3c	L1	L1	L1FLnI	chr7	93657540	93667670	-	coding	GNGT1	protein_coding	ANTISENSE	ENSG00000127928	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_7q21.3	L1	L1	L1FLI	chr7	93786633	93794681	-	coding	GNGT1	protein_coding	ANTISENSE	ENSG00000127928	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.3d	L1	L1	L1FLnI	chr7	94183800	94193131	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC002074.1	ENSG00000285090	85549	AC003092.2	ENSG00000236938	106643	chr7:94183376-94183818	None
L1FLnI_7q21.3e	L1	L1	L1FLnI	chr7	94714047	94723820	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATP5PBP2	ENSG00000214342	14832	RNU6-956P	ENSG00000239030	1536	None	None
L1FLnI_7q21.3f	L1	L1	L1FLnI	chr7	94751116	94760421	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GRPEL2P3	ENSG00000230682	22465	ATP5PBP2	ENSG00000214342	11705	None	None
L1FLnI_7q21.3g	L1	L1	L1FLnI	chr7	94791036	94801026	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GRPEL2P3	ENSG00000230682	7511	RN7SKP129	ENSG00000222220	488	None	None
L1FLnI_7q21.3h	L1	L1	L1FLnI	chr7	95172633	95181672	+	noncoding	PPP1R9A,AC002429.2	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000158528,ENSG00000236197	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.3i	L1	L1	L1FLnI	chr7	95214471	95223102	-	coding	PPP1R9A	protein_coding	ANTISENSE	ENSG00000158528	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.3j	L1	L1	L1FLnI	chr7	95375729	95385858	+	coding	PON3	protein_coding	ANTISENSE	ENSG00000105852	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.3k	L1	L1	L1FLnI	chr7	95831470	95841492	-	coding	DYNC1I1	protein_coding	ANTISENSE	ENSG00000158560	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.3l	L1	L1	L1FLnI	chr7	96284795	96294942	+	noncoding	SLC25A13	protein_coding	ANTISENSE	ENSG00000004864	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.3m	L1	L1	L1FLnI	chr7	96468613	96477649	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SEM1	ENSG00000127922	3977	RNU7-188P	ENSG00000252872	90693	None	None
L1FLnI_7q21.3n	L1	L1	L1FLnI	chr7	96551697	96561714	-	coding	SEM1	protein_coding	SENSE	ENSG00000127922	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.3o	L1	L1	L1FLnI	chr7	96579470	96589472	-	coding	SEM1	protein_coding	SENSE	ENSG00000127922	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.3p	L1	L1	L1FLnI	chr7	96625951	96635073	-	noncoding	SEM1	protein_coding	SENSE	ENSG00000127922	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q21.3q	L1	L1	L1FLnI	chr7	96756023	96765585	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MARK2P10	ENSG00000227284	92597	SEM1	ENSG00000127922	46132	None	None
L1FLnI_7q21.3r	L1	L1	L1FLnI	chr7	96756033	96765585	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MARK2P10	ENSG00000227284	92597	SEM1	ENSG00000127922	46142	None	None
L1FLnI_7q21.3s	L1	L1	L1FLnI	chr7	96846152	96856180	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MARK2P10	ENSG00000227284	2002	SEM1	ENSG00000127922	136261	chr7:96852878-96853261	None
L1FLnI_7q21.3t	L1	L1	L1FLnI	chr7	97209563	97219665	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP1S2P1	ENSG00000226046	217853	AC073900.1	ENSG00000224475	8080	None	None
L1FLnI_7q21.3u	L1	L1	L1FLnI	chr7	97257576	97267717	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP1S2P1	ENSG00000226046	169801	AC073900.1	ENSG00000224475	56093	None	None
L1FLnI_7q21.3v	L1	L1	L1FLnI	chr7	97554411	97564101	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP1S2P1	ENSG00000226046	116515	RN7SKP104	ENSG00000199475	34832	None	None
L1FLnI_7q21.3w	L1	L1	L1FLnI	chr7	97610158	97620188	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP104	ENSG00000199475	10898	TAC1	ENSG00000006128	111896	None	None
L1FLnI_7q21.3x	L1	L1	L1FLnI	chr7	97756938	97767053	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TAC1	ENSG00000006128	16466	ASNS	ENSG00000070669	84624	None	None
L1FLnI_7q21.3y	L1	L1	L1FLnI	chr7	97775974	97784521	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TAC1	ENSG00000006128	35502	ASNS	ENSG00000070669	67156	None	None
L1FLnI_7q21.3z	L1	L1	L1FLnI	chr7	97782109	97792238	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TAC1	ENSG00000006128	41637	ASNS	ENSG00000070669	59439	None	None
L1FLnI_7q21.3aa	L1	L1	L1FLnI	chr7	97806875	97816990	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TAC1	ENSG00000006128	66403	ASNS	ENSG00000070669	34687	None	None
L1FLnI_7q22.1a	L1	L1	L1FLnI	chr7	99653587	99663701	-	coding	CYP3A5	protein_coding	SENSE	ENSG00000106258	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr7:99660245-99660250
L1FLnI_7q22.1b	L1	L1	L1FLnI	chr7	99805701	99815731	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CYP3A4	ENSG00000160868	21453	CYP3A137P	ENSG00000261511	4287	None	None
L1FLnI_7q22.1c	L1	L1	L1FLnI	chr7	102719057	102729251	+	coding	AC105052.5	lncRNA	ANTISENSE	ENSG00000286830	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q22.1d	L1	L1	L1FLnI	chr7	102719057	102729272	+	coding	AC105052.5	lncRNA	ANTISENSE	ENSG00000286830	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q22.1e	L1	L1	L1FLnI	chr7	102777179	102787341	+	coding	FAM185A	protein_coding	SENSE	ENSG00000222011	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q22.1f	L1	L1	L1FLnI	chr7	102900770	102909414	-	noncoding	FBXL13	protein_coding	SENSE	ENSG00000161040	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q22.1g	L1	L1	L1FLnI	chr7	103012829	103022987	+	coding	FBXL13	protein_coding	ANTISENSE	ENSG00000161040	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q22.1h	L1	L1	L1FLnI	chr7	103034331	103044043	+	noncoding	FBXL13	protein_coding	ANTISENSE	ENSG00000161040	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q22.1i	L1	L1	L1FLnI	chr7	103183257	103193805	+	noncoding	DPY19L2P2	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000170629	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q22.1j	L1	L1	L1FLnI	chr7	103241098	103251243	+	coding	DPY19L2P2	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000170629	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q22.1k	L1	L1	L1FLnI	chr7	103457281	103466714	-	noncoding	AC005064.1	lncRNA	ANTISENSE	ENSG00000234715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q22.1l	L1	L1	L1FLnI	chr7	103500967	103511137	+	noncoding	AC005064.1,RELN	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000234715,ENSG00000189056	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q22.1m	L1	L1	L1FLnI	chr7	103738403	103747923	+	coding	RELN	protein_coding	ANTISENSE	ENSG00000189056	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q22.2a	L1	L1	L1FLnI	chr7	104206238	104216389	+	coding	ORC5	protein_coding	ANTISENSE	ENSG00000164815	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr7:104207974-104208044
L1FLnI_7q22.2b	L1	L1	L1FLnI	chr7	104273032	104283190	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ORC5	ENSG00000164815	64985	LHFPL3	ENSG00000187416	45510	None	None
L1FLnI_7q22.2c	L1	L1	L1FLnI	chr7	104557153	104567206	-	coding	LHFPL3	protein_coding	ANTISENSE	ENSG00000187416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q22.2d	L1	L1	L1FLnI	chr7	104557179	104567206	-	coding	LHFPL3	protein_coding	ANTISENSE	ENSG00000187416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q22.2e	L1	L1	L1FLnI	chr7	104586629	104596471	-	coding	LHFPL3	protein_coding	ANTISENSE	ENSG00000187416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q22.2f	L1	L1	L1FLnI	chr7	104729254	104739341	-	coding	LHFPL3,LHFPL3-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000187416,ENSG00000226869	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q22.2g	L1	L1	L1FLnI	chr7	104860635	104870754	+	coding	LHFPL3	protein_coding	SENSE	ENSG00000187416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q22.3a	L1	L1	L1FLnI	chr7	106356333	106365148	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LARP1BP2	ENSG00000243438	40590	AC004917.1	ENSG00000243797	7103	chr7:106358155-106358596	chr7:106358422-106358432
L1FLnI_7q22.3b	L1	L1	L1FLnI	chr7	106554035	106564078	-	noncoding	AC004917.1	lncRNA	SENSE	ENSG00000243797	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q22.3c	L1	L1	L1FLnI	chr7	106683892	106694018	-	coding	AC004917.1	lncRNA	SENSE	ENSG00000243797	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q22.3d	L1	L1	L1FLnI	chr7	106705909	106716079	+	coding	AC004917.1	lncRNA	ANTISENSE	ENSG00000243797	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q22.3e	L1	L1	L1FLnI	chr7	106915310	106925460	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PIK3CG	ENSG00000105851	6330	PRKAR2B	ENSG00000005249	119245	None	None
L1FLnI_7q22.3f	L1	L1	L1FLnI	chr7	107093014	107103128	-	noncoding	PRKAR2B,AC006387.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000005249,ENSG00000243193	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr7:107102421-107102428
L1FLnI_7q22.3g	L1	L1	L1FLnI	chr7	107504409	107514558	+	coding	COG5	protein_coding	ANTISENSE	ENSG00000164597	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q22.3h	L1	L1	L1FLnI	chr7	107645834	107655977	-	coding	SLC26A4-AS1	lncRNA	SENSE	ENSG00000233705	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.1a	L1	L1	L1FLnI	chr7	108272250	108282397	-	coding	NRCAM	protein_coding	SENSE	ENSG00000091129	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr7:108279015-108279029
L1FLnI_7q31.1b	L1	L1	L1FLnI	chr7	108387071	108397232	-	coding	NRCAM	protein_coding	SENSE	ENSG00000091129	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.1c	L1	L1	L1FLnI	chr7	108687562	108698726	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC002487.1	ENSG00000270425	21882	AC005487.1	ENSG00000225647	48213	None	None
L1FLnI_7q31.1d	L1	L1	L1FLnI	chr7	108914856	108924524	-	noncoding	AC004014.1	lncRNA	ANTISENSE	ENSG00000229603	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.1e	L1	L1	L1FLnI	chr7	108924534	108934176	-	noncoding	AC004014.1	lncRNA	ANTISENSE	ENSG00000229603	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.1f	L1	L1	L1FLnI	chr7	108924534	108933724	-	noncoding	AC004014.1	lncRNA	ANTISENSE	ENSG00000229603	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.1g	L1	L1	L1FLnI	chr7	108937034	108947185	-	coding	AC004014.1	lncRNA	ANTISENSE	ENSG00000229603	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.1h	L1	L1	L1FLnI	chr7	109139195	109147745	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC002386.1	ENSG00000230941	174575	BUB3P1	ENSG00000227968	144166	None	None
L1FLnI_7q31.1i	L1	L1	L1FLnI	chr7	109306582	109317941	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BUB3P1	ENSG00000227968	311553	AC002386.1	ENSG00000230941	4379	None	None
L1FLnI_7q31.1j	L1	L1	L1FLnI	chr7	109377937	109387167	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC002386.1	ENSG00000230941	51622	AC073071.1	ENSG00000234273	134814	None	None
L1FLnI_7q31.1k	L1	L1	L1FLnI	chr7	109547959	109557631	+	noncoding	AC073071.1	lncRNA	ANTISENSE	ENSG00000234273	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.1l	L1	L1	L1FLnI	chr7	109686638	109696773	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073387.2	ENSG00000271368	66801	AC073387.1	ENSG00000230192	25836	None	None
L1FLnI_7q31.1m	L1	L1	L1FLnI	chr7	109715635	109725770	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073387.1	ENSG00000230192	54833	AC073387.2	ENSG00000271368	37804	None	None
L1FLnI_7q31.1n	L1	L1	L1FLnI	chr7	109754315	109763922	-	noncoding	AC073387.2	processed_pseudogene	ANTISENSE	ENSG00000271368	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.1o	L1	L1	L1FLnI	chr7	109791485	109801640	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073387.2	ENSG00000271368	27128	EIF3IP1	ENSG00000237064	157578	None	None
L1FLnI_7q31.1p	L1	L1	L1FLnI	chr7	109905146	109914725	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073387.2	ENSG00000271368	140789	EIF3IP1	ENSG00000237064	44493	None	None
L1FLnI_7q31.1q	L1	L1	L1FLnI	chr7	109918541	109928731	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	EIF3IP1	ENSG00000237064	30487	AC073387.2	ENSG00000271368	154184	None	None
L1FLnI_7q31.1r	L1	L1	L1FLnI	chr7	110029631	110039789	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073114.1	ENSG00000226965	68242	RPL3P8	ENSG00000232199	30007	None	None
L1FLnI_7q31.1s	L1	L1	L1FLnI	chr7	110036856	110047622	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073114.1	ENSG00000226965	60409	RPL3P8	ENSG00000232199	37232	chr7:110041982-110041996	None
L1FLnI_7q31.1t	L1	L1	L1FLnI	chr7	110199576	110208603	-	noncoding	AC073114.1	lncRNA	SENSE	ENSG00000226965	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.1u	L1	L1	L1FLnI	chr7	110351081	110360737	-	noncoding	AC073114.1	lncRNA	SENSE	ENSG00000226965	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.1v	L1	L1	L1FLnI	chr7	110468721	110478841	+	coding	AC073114.1	lncRNA	ANTISENSE	ENSG00000226965	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.1w	L1	L1	L1FLnI	chr7	110468721	110478864	+	coding	AC073114.1	lncRNA	ANTISENSE	ENSG00000226965	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.1x	L1	L1	L1FLnI	chr7	110557033	110567063	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073326.2	ENSG00000287186	23019	AC073114.1	ENSG00000226965	22276	None	None
L1FLnI_7q31.1y	L1	L1	L1FLnI	chr7	110654637	110664733	-	coding	IMMP2L	protein_coding	SENSE	ENSG00000184903	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_7q31.1a	L1	L1	L1FLI	chr7	110705992	110714038	-	coding	IMMP2L	protein_coding	SENSE	ENSG00000184903	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.1z	L1	L1	L1FLnI	chr7	110739979	110750409	+	noncoding	IMMP2L	protein_coding	ANTISENSE	ENSG00000184903	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_7q31.1b	L1	L1	L1FLI	chr7	111242503	111250548	-	coding	IMMP2L	protein_coding	SENSE	ENSG00000184903	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.1aa	L1	L1	L1FLnI	chr7	111442196	111452225	+	coding	IMMP2L	protein_coding	ANTISENSE	ENSG00000184903	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.1ba	L1	L1	L1FLnI	chr7	111496323	111506480	+	coding	IMMP2L	protein_coding	ANTISENSE	ENSG00000184903	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_7q31.1	L1	L1	L1ORF2	chr7	111962193	111970237	+	coding	DOCK4	protein_coding	ANTISENSE	ENSG00000128512	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.1ca	L1	L1	L1FLnI	chr7	112541941	112551272	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC002463.1	ENSG00000223646	65168	NPM1P14	ENSG00000182965	20271	None	None
L1FLnI_7q31.1da	L1	L1	L1FLnI	chr7	112640625	112650921	-	noncoding	AC002463.1	lncRNA	ANTISENSE	ENSG00000223646	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.1ea	L1	L1	L1FLnI	chr7	112640625	112649787	-	noncoding	AC002463.1	lncRNA	ANTISENSE	ENSG00000223646	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.1fa	L1	L1	L1FLnI	chr7	112865845	112875138	+	noncoding	AC002463.1,BMT2	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000223646,ENSG00000164603	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.1ga	L1	L1	L1FLnI	chr7	112912954	112922436	+	coding	BMT2	protein_coding	ANTISENSE	ENSG00000164603	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.1ha	L1	L1	L1FLnI	chr7	113048565	113058179	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073346.2	ENSG00000279288	16945	AC018464.1	ENSG00000234520	52888	None	None
L1FLnI_7q31.1ia	L1	L1	L1FLnI	chr7	113245469	113255324	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073346.1	ENSG00000225457	99139	AC073137.1	ENSG00000270997	160365	None	None
L1FLnI_7q31.1ja	L1	L1	L1FLnI	chr7	113257198	113267224	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073137.1	ENSG00000270997	148465	AC073346.1	ENSG00000225457	110868	None	None
L1FLnI_7q31.1ka	L1	L1	L1FLnI	chr7	113469559	113479849	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073348.2	ENSG00000287592	6558	AC073348.1	ENSG00000278894	18157	None	None
L1FLnI_7q31.1la	L1	L1	L1FLnI	chr7	113530584	113539085	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073348.2	ENSG00000287592	35714	PPP1R3A	ENSG00000154415	337692	None	None
L1FLnI_7q31.1ma	L1	L1	L1FLnI	chr7	113739402	113749417	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073348.2	ENSG00000287592	244532	PPP1R3A	ENSG00000154415	127360	None	None
L1FLnI_7q31.1na	L1	L1	L1FLnI	chr7	113739402	113749400	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073348.2	ENSG00000287592	244532	PPP1R3A	ENSG00000154415	127377	None	None
L1FLI_7q31.1c	L1	L1	L1FLI	chr7	113775110	113783154	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PPP1R3A	ENSG00000154415	93623	AC073348.2	ENSG00000287592	280240	None	None
L1FLnI_7q31.1oa	L1	L1	L1FLnI	chr7	113852470	113862947	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073348.2	ENSG00000287592	357600	PPP1R3A	ENSG00000154415	13830	None	None
L1FLnI_7q31.1pa	L1	L1	L1FLnI	chr7	113949337	113961686	-	noncoding	PPP1R3A	protein_coding	SENSE	ENSG00000154415	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.1qa	L1	L1	L1FLnI	chr7	113950791	113961686	-	noncoding	PPP1R3A	protein_coding	SENSE	ENSG00000154415	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.1ra	L1	L1	L1FLnI	chr7	114051437	114061569	+	coding	PPP1R3A	protein_coding	ANTISENSE	ENSG00000154415	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:114051936-114052254	None
L1FLnI_7q31.1sa	L1	L1	L1FLnI	chr7	114249300	114259439	-	coding	FOXP2	protein_coding	ANTISENSE	ENSG00000128573	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.1ta	L1	L1	L1FLnI	chr7	114269596	114278103	-	noncoding	FOXP2	protein_coding	ANTISENSE	ENSG00000128573	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.1ua	L1	L1	L1FLnI	chr7	114875711	114886138	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MDFIC	ENSG00000135272	36016	FOXP2	ENSG00000128573	181939	None	None
L1FLnI_7q31.1va	L1	L1	L1FLnI	chr7	114875711	114884506	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MDFIC	ENSG00000135272	37648	FOXP2	ENSG00000128573	181939	None	None
L1FLnI_7q31.1wa	L1	L1	L1FLnI	chr7	114989852	114999397	-	coding	MDFIC	protein_coding	ANTISENSE	ENSG00000135272	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.2a	L1	L1	L1FLnI	chr7	115024603	115034615	-	noncoding	LINC01393	lncRNA	ANTISENSE	ENSG00000225535	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.2b	L1	L1	L1FLnI	chr7	115024616	115034615	-	noncoding	LINC01393	lncRNA	ANTISENSE	ENSG00000225535	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.2c	L1	L1	L1FLnI	chr7	115167270	115177289	-	coding	LINC01392	lncRNA	SENSE	ENSG00000233607	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.2d	L1	L1	L1FLnI	chr7	115581043	115591120	+	noncoding	SNORA25B	snoRNA	ANTISENSE	ENSG00000202377	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.2e	L1	L1	L1FLnI	chr7	115581043	115591156	+	noncoding	SNORA25B	snoRNA	ANTISENSE	ENSG00000202377	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.2f	L1	L1	L1FLnI	chr7	115590325	115600224	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SNORA25B	ENSG00000202377	8883	AC092590.1	ENSG00000242072	47237	None	None
L1FLnI_7q31.2g	L1	L1	L1FLnI	chr7	115985781	115995857	+	coding	TFEC	protein_coding	ANTISENSE	ENSG00000105967	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:115988451-115988729	chr7:115988687-115988691,chr7:115988451-115988476
L1FLnI_7q31.2h	L1	L1	L1FLnI	chr7	116071945	116081806	+	noncoding	TFEC	protein_coding	ANTISENSE	ENSG00000105967	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.2i	L1	L1	L1FLnI	chr7	116071945	116081476	+	noncoding	TFEC	protein_coding	ANTISENSE	ENSG00000105967	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.2j	L1	L1	L1FLnI	chr7	116367753	116377892	+	coding	AC002066.1,CAV2	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000237813,ENSG00000105971	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.2k	L1	L1	L1FLnI	chr7	116405362	116415374	+	coding	AC002066.1,CAV2	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000237813,ENSG00000105971	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.2l	L1	L1	L1FLnI	chr7	116717999	116727989	-	coding	MET	protein_coding	ANTISENSE	ENSG00000105976	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.2m	L1	L1	L1FLnI	chr7	116821909	116830426	-	noncoding	CAPZA2	protein_coding	ANTISENSE	ENSG00000198898	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.2n	L1	L1	L1FLnI	chr7	117342235	117352298	-	noncoding	CFTR,AC002465.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000001626,ENSG00000286390	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr7:117350065-117350259	None
L1FLnI_7q31.2o	L1	L1	L1FLnI	chr7	117444434	117455947	+	noncoding	CFTR	protein_coding	SENSE	ENSG00000001626	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.31a	L1	L1	L1FLnI	chr7	118013161	118022745	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC003084.1	ENSG00000234826	9116	LSM8	ENSG00000128534	161399	None	None
L1FLnI_7q31.31b	L1	L1	L1FLnI	chr7	118118726	118128865	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC003084.1	ENSG00000234826	114681	LSM8	ENSG00000128534	55279	None	None
L1FLnI_7q31.31c	L1	L1	L1FLnI	chr7	119107565	119119092	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079791.1	ENSG00000270516	59085	AC092098.1	ENSG00000230520	156306	None	chr7:119117708-119117710
L1FLnI_7q31.31d	L1	L1	L1FLnI	chr7	119107576	119119092	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079791.1	ENSG00000270516	59085	AC092098.1	ENSG00000230520	156317	None	chr7:119117708-119117710
L1FLnI_7q31.31e	L1	L1	L1FLnI	chr7	119192628	119201926	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079791.1	ENSG00000270516	13479	LINC02476	ENSG00000225546	293098	None	None
L1FLnI_7q31.31f	L1	L1	L1FLnI	chr7	119276016	119284740	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02476	ENSG00000225546	210284	AC079791.1	ENSG00000270516	96867	None	None
L1FLnI_7q31.31g	L1	L1	L1FLnI	chr7	119423963	119432967	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079791.1	ENSG00000270516	244814	LINC02476	ENSG00000225546	62057	None	None
L1FLnI_7q31.31h	L1	L1	L1FLnI	chr7	119445944	119454579	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02476	ENSG00000225546	40445	AC079791.1	ENSG00000270516	266795	None	None
L1FLnI_7q31.31i	L1	L1	L1FLnI	chr7	119521887	119531106	+	noncoding	LINC02476	lncRNA	ANTISENSE	ENSG00000225546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.31j	L1	L1	L1FLnI	chr7	119583211	119593236	+	coding	LINC02476	lncRNA	ANTISENSE	ENSG00000225546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.31k	L1	L1	L1FLnI	chr7	119851322	119861451	+	coding	LINC02476	lncRNA	ANTISENSE	ENSG00000225546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.31l	L1	L1	L1FLnI	chr7	119979050	119989796	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02476	ENSG00000225546	71653	RNU1-29P	ENSG00000271739	16180	None	None
L1FLnI_7q31.31m	L1	L1	L1FLnI	chr7	120065706	120075189	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-29P	ENSG00000271739	59605	AC004946.1	ENSG00000233417	65827	None	None
L1FLnI_7q31.31n	L1	L1	L1FLnI	chr7	120126545	120138179	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-29P	ENSG00000271739	120444	AC004946.1	ENSG00000233417	2837	None	None
L1FLnI_7q31.31o	L1	L1	L1FLnI	chr7	120234309	120244475	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	KCND2	ENSG00000184408	28700	AC004946.1	ENSG00000233417	7096	None	None
L1FLnI_7q31.31p	L1	L1	L1FLnI	chr7	120234334	120244475	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	KCND2	ENSG00000184408	28700	AC004946.1	ENSG00000233417	7121	None	None
L1FLnI_7q31.31q	L1	L1	L1FLnI	chr7	120897249	120907362	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TSPAN12	ENSG00000106025	38847	ING3	ENSG00000071243	43401	None	None
L1FLnI_7q31.31r	L1	L1	L1FLnI	chr7	121220475	121229814	-	coding	CPED1	protein_coding	ANTISENSE	ENSG00000106034	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.32a	L1	L1	L1FLnI	chr7	121708478	121717106	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP277	ENSG00000252704	19337	AC004875.1	ENSG00000227743	22115	None	None
L1FLnI_7q31.32b	L1	L1	L1FLnI	chr7	121719194	121728984	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP277	ENSG00000252704	7459	AC004875.1	ENSG00000227743	32831	None	None
L1FLnI_7q31.32c	L1	L1	L1FLnI	chr7	122235022	122245051	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC015983.1	ENSG00000213302	119	FEZF1	ENSG00000128610	56252	None	None
L1FLnI_7q31.32d	L1	L1	L1FLnI	chr7	122278417	122288445	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	FEZF1	ENSG00000128610	12858	AC015983.1	ENSG00000213302	43514	None	None
L1FLnI_7q31.32e	L1	L1	L1FLnI	chr7	122830818	122840943	+	coding	CADPS2	protein_coding	ANTISENSE	ENSG00000081803	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:122833011-122833016,chr7:122833742-122834124	None
L1FLnI_7q31.32f	L1	L1	L1FLnI	chr7	123063924	123072639	-	noncoding	AC073311.1	lncRNA	SENSE	ENSG00000226680	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.32g	L1	L1	L1FLnI	chr7	123078845	123088936	-	coding	AC073311.1	lncRNA	SENSE	ENSG00000226680	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.32h	L1	L1	L1FLnI	chr7	123444692	123454712	-	coding	IQUB	protein_coding	SENSE	ENSG00000164675	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.32i	L1	L1	L1FLnI	chr7	123588833	123598623	-	coding	ASB15,ASB15-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000146809,ENSG00000230442	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.32j	L1	L1	L1FLnI	chr7	123588840	123598623	-	coding	ASB15,ASB15-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000146809,ENSG00000230442	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.32k	L1	L1	L1FLnI	chr7	123838486	123848654	-	coding	HYAL4	protein_coding	ANTISENSE	ENSG00000106302	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.32l	L1	L1	L1FLnI	chr7	123850749	123861145	-	noncoding	HYAL4	protein_coding	ANTISENSE	ENSG00000106302	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.32m	L1	L1	L1FLnI	chr7	123850749	123861141	-	noncoding	HYAL4	protein_coding	ANTISENSE	ENSG00000106302	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.32n	L1	L1	L1FLnI	chr7	123890998	123901148	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HYAL4	ENSG00000106302	13517	SPAM1	ENSG00000106304	24089	None	None
L1FLnI_7q31.32o	L1	L1	L1FLnI	chr7	124093595	124103710	-	coding	AC006148.1	lncRNA	ANTISENSE	ENSG00000242593	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.32p	L1	L1	L1FLnI	chr7	124093608	124103710	-	coding	AC006148.1	lncRNA	ANTISENSE	ENSG00000242593	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.33a	L1	L1	L1FLnI	chr7	124134968	124144469	-	noncoding	AC006148.1	lncRNA	ANTISENSE	ENSG00000242593	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.33b	L1	L1	L1FLnI	chr7	124159422	124168591	+	noncoding	AC006148.1	lncRNA	SENSE	ENSG00000242593	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.33c	L1	L1	L1FLnI	chr7	124375693	124384925	+	noncoding	AC006148.1	lncRNA	SENSE	ENSG00000242593	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.33d	L1	L1	L1FLnI	chr7	124462229	124472367	-	noncoding	AC006148.1	lncRNA	ANTISENSE	ENSG00000242593	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.33e	L1	L1	L1FLnI	chr7	124519664	124528712	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-102P	ENSG00000207214	119007	AC006148.1	ENSG00000242593	30092	None	None
L1FLnI_7q31.33f	L1	L1	L1FLnI	chr7	124606004	124615137	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006148.1	ENSG00000242593	116432	RNU6-102P	ENSG00000207214	32582	None	None
L1FLnI_7q31.33g	L1	L1	L1FLnI	chr7	124704059	124713555	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004925.1	ENSG00000279419	28757	RNU6-102P	ENSG00000207214	56237	None	None
L1FLnI_7q31.33h	L1	L1	L1FLnI	chr7	124897035	124907152	+	noncoding	POT1	protein_coding	ANTISENSE	ENSG00000128513	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.33i	L1	L1	L1FLnI	chr7	124941509	124951481	+	noncoding	POT1-AS1	lncRNA	SENSE	ENSG00000224897	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.33j	L1	L1	L1FLnI	chr7	124978943	124988990	-	coding	POT1-AS1	lncRNA	ANTISENSE	ENSG00000224897	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.33k	L1	L1	L1FLnI	chr7	124978971	124988990	-	coding	POT1-AS1	lncRNA	ANTISENSE	ENSG00000224897	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.33l	L1	L1	L1FLnI	chr7	125182862	125192978	+	noncoding	POT1-AS1	lncRNA	SENSE	ENSG00000224897	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.33m	L1	L1	L1FLnI	chr7	125415348	125424036	+	noncoding	POT1-AS1	lncRNA	SENSE	ENSG00000224897	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.33n	L1	L1	L1FLnI	chr7	125710921	125720335	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC003975.1	ENSG00000197462	197536	POT1-AS1	ENSG00000224897	227955	None	None
L1FLnI_7q31.33o	L1	L1	L1FLnI	chr7	126288573	126298889	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC003975.1	ENSG00000197462	354741	AC000372.1	ENSG00000241921	80081	None	None
L1FLnI_7q31.33p	L1	L1	L1FLnI	chr7	126585108	126595361	+	noncoding	GRM8	protein_coding	ANTISENSE	ENSG00000179603	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.33q	L1	L1	L1FLnI	chr7	126609903	126620022	+	coding	GRM8	protein_coding	ANTISENSE	ENSG00000179603	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.33r	L1	L1	L1FLnI	chr7	126825221	126835335	-	coding	GRM8	protein_coding	SENSE	ENSG00000179603	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.33s	L1	L1	L1FLnI	chr7	127172971	127183134	+	noncoding	GRM8	protein_coding	ANTISENSE	ENSG00000179603	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.33t	L1	L1	L1FLnI	chr7	127172971	127183127	+	noncoding	GRM8	protein_coding	ANTISENSE	ENSG00000179603	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q31.33u	L1	L1	L1FLnI	chr7	127447475	127457596	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF800	ENSG00000048405	15551	AC000124.1	ENSG00000226770	19287	None	None
L1FLnI_7q32.1	L1	L1	L1FLnI	chr7	128288513	128298640	+	coding	RBM28	protein_coding	ANTISENSE	ENSG00000106344	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q32.2a	L1	L1	L1FLnI	chr7	130248892	130258683	-	noncoding	AC024085.1	processed_pseudogene	ANTISENSE	ENSG00000270992	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q32.2b	L1	L1	L1FLnI	chr7	130574299	130584009	+	coding	COPG2	protein_coding	ANTISENSE	ENSG00000158623	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q32.2c	L1	L1	L1FLnI	chr7	130632246	130642691	-	noncoding	COPG2	protein_coding	SENSE	ENSG00000158623	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q32.3a	L1	L1	L1FLnI	chr7	131311629	131322101	+	coding	MKLN1,MKLN1-AS	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000128585,ENSG00000236753	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q32.3b	L1	L1	L1FLnI	chr7	131977847	131987983	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105443.1	ENSG00000229532	98283	AC009518.1	ENSG00000224865	28894	None	None
L1FLnI_7q32.3c	L1	L1	L1FLnI	chr7	131977859	131987983	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105443.1	ENSG00000229532	98283	AC009518.1	ENSG00000224865	28906	None	None
L1FLnI_7q33a	L1	L1	L1FLnI	chr7	133320775	133330857	-	noncoding	EXOC4	protein_coding	ANTISENSE	ENSG00000131558	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q33b	L1	L1	L1FLnI	chr7	133348636	133358479	-	noncoding	EXOC4	protein_coding	ANTISENSE	ENSG00000131558	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q33c	L1	L1	L1FLnI	chr7	133888927	133898955	-	coding	EXOC4	protein_coding	ANTISENSE	ENSG00000131558	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q33d	L1	L1	L1FLnI	chr7	133888929	133898955	-	coding	EXOC4	protein_coding	ANTISENSE	ENSG00000131558	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q33e	L1	L1	L1FLnI	chr7	133963825	133974308	-	noncoding	EXOC4	protein_coding	ANTISENSE	ENSG00000131558	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q33f	L1	L1	L1FLnI	chr7	134235598	134245697	+	coding	LRGUK	protein_coding	SENSE	ENSG00000155530	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q33g	L1	L1	L1FLnI	chr7	134972504	134982655	+	noncoding	AC083870.1	lncRNA	ANTISENSE	ENSG00000286458	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q33h	L1	L1	L1FLnI	chr7	135063249	135073425	+	coding	AGBL3	protein_coding	SENSE	ENSG00000146856	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q33i	L1	L1	L1FLnI	chr7	135083715	135094790	-	noncoding	AGBL3,CYREN	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000146856,ENSG00000122783	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr7:135094756-135094762
L1FLnI_7q33j	L1	L1	L1FLnI	chr7	135118131	135127774	+	noncoding	AGBL3,CYREN	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000146856,ENSG00000122783	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q33k	L1	L1	L1FLnI	chr7	136108426	136118222	-	coding	AC078845.1	lncRNA	ANTISENSE	ENSG00000232053	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q33l	L1	L1	L1FLnI	chr7	136413682	136423710	-	coding	AC078845.1	lncRNA	ANTISENSE	ENSG00000232053	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q33m	L1	L1	L1FLnI	chr7	136562215	136571395	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009264.1	ENSG00000234352	114164	ZP3P2	ENSG00000226066	73898	None	None
L1FLnI_7q33n	L1	L1	L1FLnI	chr7	136774258	136784283	-	coding	AC009264.1	lncRNA	SENSE	ENSG00000234352	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q33o	L1	L1	L1FLnI	chr7	136827693	136837716	+	coding	AC009264.1	lncRNA	ANTISENSE	ENSG00000234352	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q33p	L1	L1	L1FLnI	chr7	136977958	136988400	-	noncoding	AC009264.1,CHRM2	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000234352,ENSG00000181072	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q33q	L1	L1	L1FLnI	chr7	137089498	137098718	+	noncoding	AC009264.1	lncRNA	ANTISENSE	ENSG00000234352	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q33r	L1	L1	L1FLnI	chr7	137178110	137188101	+	coding	AC009264.1	lncRNA	ANTISENSE	ENSG00000234352	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr7:137178802-137178805
L1FLnI_7q33s	L1	L1	L1FLnI	chr7	137420900	137431064	+	coding	DGKI	protein_coding	ANTISENSE	ENSG00000157680	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q33t	L1	L1	L1FLnI	chr7	137779190	137788546	+	noncoding	DGKI	protein_coding	ANTISENSE	ENSG00000157680	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q33u	L1	L1	L1FLnI	chr7	138484855	138493958	-	coding	TRIM24,AC013429.2	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000122779,ENSG00000234995	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q34a	L1	L1	L1FLnI	chr7	138530751	138540868	-	coding	TRIM24	protein_coding	ANTISENSE	ENSG00000122779	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr7:138537408-138537412
L1FLnI_7q34b	L1	L1	L1FLnI	chr7	140102820	140112896	-	coding	KDM7A	protein_coding	SENSE	ENSG00000006459	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q34c	L1	L1	L1FLnI	chr7	140708118	140717633	-	coding	NDUFB2	protein_coding	ANTISENSE	ENSG00000090266	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q34d	L1	L1	L1FLnI	chr7	141029108	141039252	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MRPS33	ENSG00000090263	13880	RNU4-74P	ENSG00000223212	12997	None	None
L1FLnI_7q34e	L1	L1	L1FLnI	chr7	141061516	141071542	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM178B	ENSG00000261115	2522	RNU4-74P	ENSG00000223212	9107	None	None
L1FLnI_7q34f	L1	L1	L1FLnI	chr7	141769463	141779586	-	noncoding	SSBP1,TAS2R4	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000106028,ENSG00000127364	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_7q34	L1	L1	L1FLI	chr7	141919669	141927714	-	coding	MGAM,OR9A4,CLEC5A	protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,SENSE	ENSG00000257335,ENSG00000258083,ENSG00000258227	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q34g	L1	L1	L1FLnI	chr7	141932639	141944232	+	noncoding	MGAM,CLEC5A	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000257335,ENSG00000258227	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr7:141934488-141934596	chr7:141944091-141944136,chr7:141943964-141943981
L1FLnI_7q34h	L1	L1	L1FLnI	chr7	141979587	141989614	-	coding	MGAM	protein_coding	ANTISENSE	ENSG00000257335	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:141979654-141980050	chr7:141988854-141988864,chr7:141988869-141988928
L1FLnI_7q34i	L1	L1	L1FLnI	chr7	142206417	142215226	+	noncoding	MGAM2	protein_coding	SENSE	ENSG00000257743	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q34j	L1	L1	L1FLnI	chr7	143084775	143094932	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR6W1P	ENSG00000179420	21190	PIP	ENSG00000159763	37145	None	None
L1FLnI_7q34k	L1	L1	L1FLnI	chr7	143159720	143169855	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TAS2R39	ENSG00000236398	13564	PIP	ENSG00000159763	19981	None	None
L1FLnI_7q35a	L1	L1	L1FLnI	chr7	144143467	144152261	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR2A13P	ENSG00000273234	529	OR2A3P	ENSG00000183122	1225	None	None
L1FLnI_7q35b	L1	L1	L1FLnI	chr7	145076152	145085063	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004911.1	ENSG00000226592	184451	RPL7P59	ENSG00000225918	35211	None	None
L1FLnI_7q35c	L1	L1	L1FLnI	chr7	145076522	145085063	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004911.1	ENSG00000226592	184451	RPL7P59	ENSG00000225918	35581	None	None
L1FLnI_7q35d	L1	L1	L1FLnI	chr7	145412478	145422611	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DPY19L4P2	ENSG00000231839	160586	AC004911.1	ENSG00000226592	142094	None	None
L1FLnI_7q35e	L1	L1	L1FLnI	chr7	145655681	145665184	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DPY19L4P2	ENSG00000231839	70864	AC006007.1	ENSG00000230746	10495	None	None
L1FLnI_7q35f	L1	L1	L1FLnI	chr7	145838252	145847007	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073308.1	ENSG00000280144	203055	AC006007.1	ENSG00000230746	156883	None	None
L1FLnI_7q35g	L1	L1	L1FLnI	chr7	145863998	145872901	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073308.1	ENSG00000280144	177161	AC006007.1	ENSG00000230746	182629	chr7:145869261-145869401	None
L1FLnI_7q35h	L1	L1	L1FLnI	chr7	145895495	145907002	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073308.1	ENSG00000280144	143060	AC006007.1	ENSG00000230746	214126	None	None
L1FLnI_7q35i	L1	L1	L1FLnI	chr7	145897314	145907002	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073308.1	ENSG00000280144	143060	AC006007.1	ENSG00000230746	215945	None	None
L1FLnI_7q35j	L1	L1	L1FLnI	chr7	145940315	145948862	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC006007.1	ENSG00000230746	258946	AC073308.1	ENSG00000280144	101200	None	None
L1FLnI_7q35k	L1	L1	L1FLnI	chr7	145963092	145973207	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006007.1	ENSG00000230746	281723	AC073308.1	ENSG00000280144	76855	None	None
L1FLnI_7q35l	L1	L1	L1FLnI	chr7	146013060	146023092	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073308.1	ENSG00000280144	26970	AC006007.1	ENSG00000230746	331691	None	None
L1FLnI_7q35m	L1	L1	L1FLnI	chr7	146036460	146045005	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073308.1	ENSG00000280144	5057	AC006007.1	ENSG00000230746	355091	None	None
L1FLnI_7q35n	L1	L1	L1FLnI	chr7	146902286	146912317	+	coding	CNTNAP2	protein_coding	SENSE	ENSG00000174469	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q35o	L1	L1	L1FLnI	chr7	146924955	146935111	+	coding	CNTNAP2	protein_coding	SENSE	ENSG00000174469	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q35p	L1	L1	L1FLnI	chr7	147436956	147447130	-	noncoding	CNTNAP2	protein_coding	ANTISENSE	ENSG00000174469	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q35q	L1	L1	L1FLnI	chr7	147731542	147741666	-	coding	CNTNAP2	protein_coding	ANTISENSE	ENSG00000174469	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q35r	L1	L1	L1FLnI	chr7	147842093	147852123	-	coding	CNTNAP2,RNA5SP249	protein_coding,rRNA_pseudogene	ANTISENSE,ANTISENSE	ENSG00000174469,ENSG00000251936	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q35s	L1	L1	L1FLnI	chr7	147862435	147872609	-	coding	CNTNAP2	protein_coding	ANTISENSE	ENSG00000174469	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q36.1a	L1	L1	L1FLnI	chr7	149573321	149583448	-	coding	ZNF767P	transcribed_unprocessed_pseudogene	SENSE	ENSG00000133624	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr7:149583196-149583438	None
L1FLnI_7q36.1b	L1	L1	L1FLnI	chr7	150113287	150123740	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092666.1	ENSG00000241449	36632	AC006008.1	ENSG00000286912	110454	None	None
L1FLnI_7q36.1c	L1	L1	L1FLnI	chr7	150113287	150122758	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092666.1	ENSG00000241449	36632	AC006008.1	ENSG00000286912	111436	None	None
L1FLnI_7q36.1d	L1	L1	L1FLnI	chr7	150492746	150502758	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073111.2	ENSG00000271582	7611	STRADBP1	ENSG00000213205	9801	None	None
L1FLnI_7q36.1e	L1	L1	L1FLnI	chr7	150539457	150549295	+	coding	ALDH7A1P3	processed_pseudogene	ANTISENSE	ENSG00000243853	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q36.1f	L1	L1	L1FLnI	chr7	150547007	150555805	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ALDH7A1P3	ENSG00000243853	4909	GIMAP4	ENSG00000133574	11564	None	None
L1FLnI_7q36.1g	L1	L1	L1FLnI	chr7	150573982	150584121	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC069304.3	ENSG00000271568	19440	GIMAP4	ENSG00000133574	29	None	None
L1FLnI_7q36.1h	L1	L1	L1FLnI	chr7	150588859	150598698	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC069304.3	ENSG00000271568	4863	GIMAP4	ENSG00000133574	14906	None	None
L1FLnI_7q36.1i	L1	L1	L1FLnI	chr7	150593596	150603128	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GIMAP4	ENSG00000133574	19643	AC069304.3	ENSG00000271568	433	None	None
L1FLnI_7q36.1j	L1	L1	L1FLnI	chr7	150634148	150642906	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069304.2	ENSG00000270990	33927	GIMAP6	ENSG00000133561	1500	None	None
L1FLnI_7q36.1k	L1	L1	L1FLnI	chr7	150674874	150683792	+	noncoding	AC069304.2	processed_pseudogene	ANTISENSE	ENSG00000270990	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q36.1l	L1	L1	L1FLnI	chr7	150702740	150712766	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GIMAP2	ENSG00000106560	9099	GIMAP1	ENSG00000213203	3840	None	None
L1FLnI_7q36.1m	L1	L1	L1FLnI	chr7	150804057	150814215	+	noncoding	TMEM176A	protein_coding	SENSE	ENSG00000002933	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q36.1n	L1	L1	L1FLnI	chr7	150875845	150885683	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AOC1	ENSG00000002726	14341	KCNH2	ENSG00000055118	59278	None	chr7:150877124-150877137
L1FLnI_7q36.1o	L1	L1	L1FLnI	chr7	152059979	152070087	-	coding	GALNT11	protein_coding	ANTISENSE	ENSG00000178234	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q36.2a	L1	L1	L1FLnI	chr7	152940798	152951360	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079809.1	ENSG00000224104	192953	AC006348.1	ENSG00000286565	3817	None	chr7:152941153-152941156
L1FLnI_7q36.2b	L1	L1	L1FLnI	chr7	153116533	153126057	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC079809.1	ENSG00000224104	18256	AC006348.1	ENSG00000286565	179552	None	None
L1FLnI_7q36.2c	L1	L1	L1FLnI	chr7	153133358	153143808	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079809.1	ENSG00000224104	505	AC006348.1	ENSG00000286565	196377	None	None
L1FLnI_7q36.2d	L1	L1	L1FLnI	chr7	153163899	153172548	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01287	ENSG00000234722	182817	AC079809.1	ENSG00000224104	19311	None	None
L1FLnI_7q36.2e	L1	L1	L1FLnI	chr7	153228510	153238946	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01287	ENSG00000234722	116419	AC079809.1	ENSG00000224104	83922	None	None
L1FLnI_7q36.2f	L1	L1	L1FLnI	chr7	153865157	153875299	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DPP6	ENSG00000130226	11798	AC005998.1	ENSG00000287744	116171	None	None
L1FLnI_7q36.2g	L1	L1	L1FLnI	chr7	153977059	153987505	-	coding	DPP6	protein_coding	ANTISENSE	ENSG00000130226	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q36.2h	L1	L1	L1FLnI	chr7	153978037	153987505	-	coding	DPP6	protein_coding	ANTISENSE	ENSG00000130226	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q36.3a	L1	L1	L1FLnI	chr7	155685981	155694939	-	coding	RBM33	protein_coding	ANTISENSE	ENSG00000184863	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q36.3b	L1	L1	L1FLnI	chr7	156241179	156251490	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093813.1	ENSG00000270584	12057	AF093117.1	ENSG00000207061	54956	None	None
L1FLnI_7q36.3c	L1	L1	L1FLnI	chr7	156734408	156743576	+	noncoding	LMBR1	protein_coding	ANTISENSE	ENSG00000105983	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_7q36.3d	L1	L1	L1FLnI	chr7	156908896	156919042	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC006357.1	ENSG00000230033	25679	LMBR1	ENSG00000105983	15680	None	None
L1FLnI_7q36.3e	L1	L1	L1FLnI	chr7	157099360	157108042	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC006967.3	ENSG00000269446	1938	AC006967.1	ENSG00000229365	10817	None	chr7:157105669-157105674
L1FLnI_7q36.3f	L1	L1	L1FLnI	chr7	157447921	157458045	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006372.3	ENSG00000234210	8186	DNAJB6	ENSG00000105993	30482	None	None
L1FLnI_7q36.3g	L1	L1	L1FLnI	chr7	159294881	159305024	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PIP5K1P2	ENSG00000229435	61504	NA	NA	NA	None	None
L1FLnI_8p23.3a	L1	L1	L1FLnI	chr8	152785	163206	+	noncoding	WBP1LP3	processed_pseudogene	SENSE	ENSG00000253612	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p23.3b	L1	L1	L1FLnI	chr8	366069	376220	-	coding	FAM87A	lncRNA	SENSE	ENSG00000182366	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p23.3c	L1	L1	L1FLnI	chr8	772848	782866	-	coding	DLGAP2	protein_coding	ANTISENSE	ENSG00000198010	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p23.3d	L1	L1	L1FLnI	chr8	883217	892376	-	noncoding	DLGAP2,AC026950.2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000198010,ENSG00000282759	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:883226-883255,chr8:883713-883729,chr8:891869-891879
L1FLnI_8p23.3e	L1	L1	L1FLnI	chr8	1167386	1177528	-	coding	DLGAP2	protein_coding	ANTISENSE	ENSG00000198010	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr8:1174620-1174631
L1FLnI_8p23.3f	L1	L1	L1FLnI	chr8	1217154	1226875	-	coding	DLGAP2	protein_coding	ANTISENSE	ENSG00000198010	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p23.3g	L1	L1	L1FLnI	chr8	1595376	1605080	-	noncoding	DLGAP2,DLGAP2-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000198010,ENSG00000253267	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p23.3h	L1	L1	L1FLnI	chr8	1604079	1614055	+	coding	DLGAP2,DLGAP2-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000198010,ENSG00000253267	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_8p23.2a	L1	L1	L1ORF2	chr8	2300948	2308996	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC245519.1	ENSG00000253444	184880	MYOM2	ENSG00000036448	135396	None	None
L1FLnI_8p23.2a	L1	L1	L1FLnI	chr8	2317185	2327239	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC245519.1	ENSG00000253444	166637	MYOM2	ENSG00000036448	151633	None	None
L1FLnI_8p23.2b	L1	L1	L1FLnI	chr8	2333120	2343215	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MYOM2	ENSG00000036448	167568	AC245519.1	ENSG00000253444	150661	None	None
L1FLnI_8p23.2c	L1	L1	L1FLnI	chr8	2378517	2388611	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC245519.1	ENSG00000253444	105265	MYOM2	ENSG00000036448	212965	None	None
L1FLnI_8p23.2d	L1	L1	L1FLnI	chr8	2394489	2404543	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MYOM2	ENSG00000036448	228937	AC245519.1	ENSG00000253444	89333	None	None
L1ORF2_8p23.2b	L1	L1	L1ORF2	chr8	2412732	2420780	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MYOM2	ENSG00000036448	247180	AC245519.1	ENSG00000253444	73096	None	None
L1FLnI_8p23.2e	L1	L1	L1FLnI	chr8	2739910	2748636	+	noncoding	AC246817.1	lncRNA	SENSE	ENSG00000253853	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p23.2f	L1	L1	L1FLnI	chr8	2739910	2748635	+	noncoding	AC246817.1	lncRNA	SENSE	ENSG00000253853	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p23.2g	L1	L1	L1FLnI	chr8	3270429	3279832	-	coding	CSMD1	protein_coding	SENSE	ENSG00000183117	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p23.2h	L1	L1	L1FLnI	chr8	3288328	3298470	-	noncoding	CSMD1	protein_coding	SENSE	ENSG00000183117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p23.2i	L1	L1	L1FLnI	chr8	3449814	3459944	-	coding	CSMD1	protein_coding	SENSE	ENSG00000183117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p23.2j	L1	L1	L1FLnI	chr8	3674645	3683696	+	coding	CSMD1	protein_coding	ANTISENSE	ENSG00000183117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p23.2k	L1	L1	L1FLnI	chr8	4366324	4374823	-	noncoding	CSMD1	protein_coding	SENSE	ENSG00000183117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p23.2l	L1	L1	L1FLnI	chr8	4567662	4578079	-	noncoding	CSMD1	protein_coding	SENSE	ENSG00000183117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr8:4577156-4577346	None
L1FLnI_8p23.2m	L1	L1	L1FLnI	chr8	4568625	4578079	-	noncoding	CSMD1	protein_coding	SENSE	ENSG00000183117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr8:4577156-4577346	None
L1FLnI_8p23.2n	L1	L1	L1FLnI	chr8	4850908	4860919	+	coding	CSMD1	protein_coding	ANTISENSE	ENSG00000183117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p23.2o	L1	L1	L1FLnI	chr8	5183531	5193659	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL318P	ENSG00000242079	40824	AC007718.1	ENSG00000278256	169712	None	None
L1FLnI_8p23.2p	L1	L1	L1FLnI	chr8	5183531	5193646	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL318P	ENSG00000242079	40824	AC007718.1	ENSG00000278256	169725	None	None
L1FLnI_8p23.2q	L1	L1	L1FLnI	chr8	6085278	6095399	-	noncoding	AC009435.1	lncRNA	SENSE	ENSG00000253880	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p23.2r	L1	L1	L1FLnI	chr8	6187583	6197649	+	coding	AC009435.1	lncRNA	ANTISENSE	ENSG00000253880	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p23.1a	L1	L1	L1FLnI	chr8	6379048	6387736	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC009435.1	ENSG00000253880	121511	AC016065.1	ENSG00000246089	15815	None	None
L1FLnI_8p23.1b	L1	L1	L1FLnI	chr8	6844585	6853640	-	coding	AF233439.1	lncRNA	ANTISENSE	ENSG00000245857	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p23.1c	L1	L1	L1FLnI	chr8	8467361	8477387	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC103957.2	ENSG00000254153	6024	AC114550.2	ENSG00000253343	78351	None	None
L1FLnI_8p23.1d	L1	L1	L1FLnI	chr8	9440809	9450955	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC021242.1	ENSG00000249050	2743	AC021242.2	ENSG00000254237	4604	None	None
L1FLnI_8p23.1e	L1	L1	L1FLnI	chr8	9834871	9845293	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TNKS	ENSG00000173273	52525	LINC00599	ENSG00000253230	54578	None	None
L1FLnI_8p23.1f	L1	L1	L1FLnI	chr8	9873286	9883204	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TNKS	ENSG00000173273	90940	LINC00599	ENSG00000253230	16667	None	None
L1FLnI_8p23.1g	L1	L1	L1FLnI	chr8	11402389	11411608	-	coding	FAM167A-AS1	lncRNA	ANTISENSE	ENSG00000184608	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p23.1h	L1	L1	L1FLnI	chr8	11814370	11824502	-	noncoding	FDFT1	protein_coding	ANTISENSE	ENSG00000079459	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p22a	L1	L1	L1FLnI	chr8	13755621	13765648	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022880.1	ENSG00000255413	12840	AC022690.2	ENSG00000254753	78453	None	None
L1FLnI_8p22b	L1	L1	L1FLnI	chr8	14132682	14142832	+	coding	SGCZ	protein_coding	ANTISENSE	ENSG00000185053	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p22c	L1	L1	L1FLnI	chr8	14799718	14809743	+	coding	SGCZ	protein_coding	ANTISENSE	ENSG00000185053	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p22d	L1	L1	L1FLnI	chr8	14814704	14823340	+	noncoding	SGCZ	protein_coding	ANTISENSE	ENSG00000185053	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p22e	L1	L1	L1FLnI	chr8	15555510	15565528	-	coding	TUSC3	protein_coding	ANTISENSE	ENSG00000104723	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p22f	L1	L1	L1FLnI	chr8	15575814	15585823	-	coding	TUSC3	protein_coding	ANTISENSE	ENSG00000104723	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p22g	L1	L1	L1FLnI	chr8	15678159	15688981	-	noncoding	TUSC3,AC100850.1	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000104723,ENSG00000248423	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p22h	L1	L1	L1FLnI	chr8	15679861	15688981	-	noncoding	TUSC3,AC100850.1	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000104723,ENSG00000248423	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p22i	L1	L1	L1FLnI	chr8	16217345	16227318	-	noncoding	MSR1	protein_coding	SENSE	ENSG00000038945	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p22j	L1	L1	L1FLnI	chr8	16870792	16881069	-	noncoding	AC011586.2	lncRNA	SENSE	ENSG00000253496	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p22k	L1	L1	L1FLnI	chr8	16870792	16880008	-	noncoding	AC011586.2	lncRNA	SENSE	ENSG00000253496	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p22l	L1	L1	L1FLnI	chr8	16940470	16950495	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011586.2	ENSG00000253496	25426	FGF20	ENSG00000078579	41686	None	None
L1FLnI_8p22m	L1	L1	L1FLnI	chr8	16973357	16983770	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FGF20	ENSG00000078579	8411	AC011586.2	ENSG00000253496	58313	None	None
L1FLnI_8p22n	L1	L1	L1FLnI	chr8	17256411	17265825	-	noncoding	VPS37A	protein_coding	ANTISENSE	ENSG00000155975	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p22o	L1	L1	L1FLnI	chr8	18159270	18168222	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC124242.3	ENSG00000286542	31924	NAT1	ENSG00000171428	2255	None	None
L1FLnI_8p22p	L1	L1	L1FLnI	chr8	18463389	18473565	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NAT2	ENSG00000156006	62171	PSD3	ENSG00000156011	53738	None	None
L1FLnI_8p21.3a	L1	L1	L1FLnI	chr8	19279834	19291421	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SH2D4A	ENSG00000104611	22272	AC068880.5	ENSG00000279919	2261	None	None
L1FLnI_8p21.3b	L1	L1	L1FLnI	chr8	19909541	19919628	-	noncoding	LPL	protein_coding	ANTISENSE	ENSG00000175445	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p21.3c	L1	L1	L1FLnI	chr8	19926663	19936800	+	coding	LPL	protein_coding	SENSE	ENSG00000175445	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p21.3d	L1	L1	L1FLnI	chr8	20034832	20044955	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC100802.1	ENSG00000253775	34159	LPL	ENSG00000175445	67573	None	None
L1FLnI_8p21.3e	L1	L1	L1FLnI	chr8	20739205	20749277	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018541.1	ENSG00000253300	39053	TMEM97P2	ENSG00000253866	185158	None	None
L1FLnI_8p21.3f	L1	L1	L1FLnI	chr8	20952557	20962835	+	noncoding	AC021613.1,AC015468.1,AC015468.2	lncRNA,lncRNA,lncRNA	ANTISENSE,SENSE,SENSE	ENSG00000254092,ENSG00000253147,ENSG00000254026	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:20953629-20953635
L1FLnI_8p21.3g	L1	L1	L1FLnI	chr8	21427560	21438002	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021355.1	ENSG00000254334	118074	GFRA2	ENSG00000168546	252396	None	None
L1FLnI_8p21.3h	L1	L1	L1FLnI	chr8	21822221	21832239	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GFRA2	ENSG00000168546	9864	DOK2	ENSG00000147443	76634	None	None
L1FLnI_8p21.3i	L1	L1	L1FLnI	chr8	23373456	23383577	-	coding	LOXL2	protein_coding	SENSE	ENSG00000134013	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p21.2a	L1	L1	L1FLnI	chr8	23644695	23654719	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NKX3-1	ENSG00000167034	23978	SINHCAFP3	ENSG00000253488	9188	None	None
L1FLnI_8p21.2b	L1	L1	L1FLnI	chr8	24042296	24052590	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STC1	ENSG00000159167	187490	RNU1-148P	ENSG00000207201	24407	None	None
L1FLnI_8p21.2c	L1	L1	L1FLnI	chr8	24158055	24167722	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023202.1	ENSG00000253891	1279	RNU1-148P	ENSG00000207201	80897	None	None
L1FLnI_8p21.2d	L1	L1	L1FLnI	chr8	24448174	24458309	-	coding	AC120193.1,ADAM7	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000253535,ENSG00000069206	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr8:24456651-24456653
L1FLnI_8p21.2e	L1	L1	L1FLnI	chr8	24448187	24458309	-	coding	AC120193.1,ADAM7	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000253535,ENSG00000069206	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr8:24456651-24456653
L1FLnI_8p21.2f	L1	L1	L1FLnI	chr8	24836075	24846219	+	noncoding	AC120193.1	lncRNA	ANTISENSE	ENSG00000253535	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p21.2g	L1	L1	L1FLnI	chr8	25608873	25618974	-	coding	AC009623.1	lncRNA	ANTISENSE	ENSG00000253100	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p21.2h	L1	L1	L1FLnI	chr8	25654444	25664444	-	coding	AC009623.1	lncRNA	ANTISENSE	ENSG00000253100	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p21.2i	L1	L1	L1FLnI	chr8	25729845	25739854	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC009623.2	ENSG00000253342	36825	AC009623.1	ENSG00000253100	41059	None	None
L1FLnI_8p21.2j	L1	L1	L1FLnI	chr8	25765196	25775679	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC009623.1	ENSG00000253100	76410	AC009623.2	ENSG00000253342	1000	None	None
L1FLnI_8p21.2k	L1	L1	L1FLnI	chr8	25765196	25775303	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC009623.1	ENSG00000253100	76410	AC009623.2	ENSG00000253342	1376	None	None
L1FLnI_8p21.2l	L1	L1	L1FLnI	chr8	25824723	25835104	-	noncoding	AC009623.3,AC090103.1	lncRNA,lncRNA	SENSE,SENSE	ENSG00000285890,ENSG00000254178	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p21.2m	L1	L1	L1FLnI	chr8	26392114	26402079	+	coding	BNIP3L	protein_coding	SENSE	ENSG00000104765	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p21.2n	L1	L1	L1FLnI	chr8	26934443	26944587	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC067904.3	ENSG00000275115	65899	ADRA1A	ENSG00000120907	67165	None	None
L1FLnI_8p21.2o	L1	L1	L1FLnI	chr8	26934456	26944587	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC067904.3	ENSG00000275115	65899	ADRA1A	ENSG00000120907	67178	None	None
L1FLnI_8p21.2p	L1	L1	L1FLnI	chr8	27057354	27067483	-	coding	AC067904.2	processed_pseudogene	SENSE	ENSG00000253899	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_8p21.2	L1	L1	L1ORF2	chr8	27112614	27120659	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090150.2	ENSG00000253903	24831	AC090150.1	ENSG00000253888	51255	None	None
L1FLnI_8p21.1	L1	L1	L1FLnI	chr8	27548894	27558935	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GULOP	ENSG00000234770	1339	EPHX2	ENSG00000120915	3330	None	None
L1FLnI_8p12a	L1	L1	L1FLnI	chr8	29445717	29455843	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084262.2	ENSG00000285601	85495	AC084026.2	ENSG00000253632	71469	None	None
L1FLnI_8p12b	L1	L1	L1FLnI	chr8	31230766	31240918	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC068672.2	ENSG00000253377	34624	KCTD9P6	ENSG00000229211	9782	None	None
L1FLnI_8p12c	L1	L1	L1FLnI	chr8	31483625	31493173	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068672.1	ENSG00000253275	4250	AC068672.2	ENSG00000253377	92820	chr8:31492646-31492938	chr8:31492646-31492647
L1FLnI_8p12d	L1	L1	L1FLnI	chr8	31513647	31523756	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090816.1	ENSG00000287204	12874	AC068672.1	ENSG00000253275	15035	None	None
L1FLnI_8p12e	L1	L1	L1FLnI	chr8	31556156	31564687	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090816.1	ENSG00000287204	9421	RNA5SP261	ENSG00000222468	33412	None	None
L1FLnI_8p12f	L1	L1	L1FLnI	chr8	31851113	31861133	-	coding	NRG1	protein_coding	ANTISENSE	ENSG00000157168	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p12g	L1	L1	L1FLnI	chr8	31934607	31944042	+	noncoding	NRG1	protein_coding	SENSE	ENSG00000157168	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p12h	L1	L1	L1FLnI	chr8	31934607	31944059	+	noncoding	NRG1	protein_coding	SENSE	ENSG00000157168	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p12i	L1	L1	L1FLnI	chr8	32032759	32041929	-	noncoding	NRG1,NRG1-IT1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000157168,ENSG00000253974	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p12j	L1	L1	L1FLnI	chr8	32167862	32177985	+	coding	NRG1	protein_coding	SENSE	ENSG00000157168	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p12k	L1	L1	L1FLnI	chr8	32251422	32259995	-	noncoding	NRG1,RNA5SP263	protein_coding,rRNA_pseudogene	ANTISENSE,ANTISENSE	ENSG00000157168,ENSG00000200246	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p12l	L1	L1	L1FLnI	chr8	32940326	32949995	-	noncoding	AC090204.1	lncRNA	ANTISENSE	ENSG00000247134	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p12m	L1	L1	L1FLnI	chr8	32991077	32999952	-	noncoding	AC090204.1	lncRNA	ANTISENSE	ENSG00000247134	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p12n	L1	L1	L1FLnI	chr8	33246548	33256883	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-528P	ENSG00000252735	81984	AC104027.1	ENSG00000253993	19401	None	None
L1FLnI_8p12o	L1	L1	L1FLnI	chr8	33697699	33706570	-	coding	AF279873.3	lncRNA	ANTISENSE	ENSG00000253642	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p12p	L1	L1	L1FLnI	chr8	33749171	33759700	-	noncoding	AF279873.3	lncRNA	ANTISENSE	ENSG00000253642	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:33755747-33755774
L1FLnI_8p12q	L1	L1	L1FLnI	chr8	33874694	33885243	-	noncoding	AF279873.3	lncRNA	ANTISENSE	ENSG00000253642	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p12r	L1	L1	L1FLnI	chr8	33874694	33883577	-	noncoding	AF279873.3	lncRNA	ANTISENSE	ENSG00000253642	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p12s	L1	L1	L1FLnI	chr8	33896546	33905235	-	coding	AF279873.3	lncRNA	ANTISENSE	ENSG00000253642	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p12t	L1	L1	L1FLnI	chr8	33896563	33905235	-	coding	AF279873.3	lncRNA	ANTISENSE	ENSG00000253642	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p12u	L1	L1	L1FLnI	chr8	33960988	33971443	-	coding	AF279873.3,AF279873.1	lncRNA,processed_pseudogene	ANTISENSE,SENSE	ENSG00000253642,ENSG00000188512	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p12v	L1	L1	L1FLnI	chr8	34051283	34061424	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AF279873.3	ENSG00000253642	12179	AC087855.2	ENSG00000254302	113462	None	None
L1FLnI_8p12w	L1	L1	L1FLnI	chr8	34171351	34181829	+	coding	AC087855.2	lncRNA	SENSE	ENSG00000254302	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p12x	L1	L1	L1FLnI	chr8	34211434	34221578	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC087855.2	ENSG00000254302	3921	AC090993.1	ENSG00000253108	6861	None	None
L1FLnI_8p12y	L1	L1	L1FLnI	chr8	34293779	34303841	+	noncoding	AC090993.1	lncRNA	SENSE	ENSG00000253108	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p12z	L1	L1	L1FLnI	chr8	34362194	34371189	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01288	ENSG00000254344	412839	AC090993.1	ENSG00000253108	15463	None	None
L1FLnI_8p12aa	L1	L1	L1FLnI	chr8	34434802	34444346	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090993.1	ENSG00000253108	88071	LINC01288	ENSG00000254344	339682	None	None
L1FLnI_8p12ba	L1	L1	L1FLnI	chr8	34531906	34540856	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090993.1	ENSG00000253108	185175	LINC01288	ENSG00000254344	243172	None	None
L1FLnI_8p12ca	L1	L1	L1FLnI	chr8	34536927	34546887	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090993.1	ENSG00000253108	190196	LINC01288	ENSG00000254344	237141	None	None
L1FLnI_8p12da	L1	L1	L1FLnI	chr8	34736008	34744693	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090993.1	ENSG00000253108	389277	LINC01288	ENSG00000254344	39335	None	None
L1FLnI_8p12ea	L1	L1	L1FLnI	chr8	35170974	35181008	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	UNC5D	ENSG00000156687	54467	AC099685.1	ENSG00000287152	77465	None	None
L1FLnI_8p12fa	L1	L1	L1FLnI	chr8	35527547	35537571	-	coding	UNC5D	protein_coding	ANTISENSE	ENSG00000156687	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p12ga	L1	L1	L1FLnI	chr8	36002614	36011670	+	noncoding	AC124290.1,AC124290.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000253452,ENSG00000253524	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p12ha	L1	L1	L1FLnI	chr8	36121488	36130638	-	noncoding	AC124290.1,AC124290.3	lncRNA,processed_pseudogene	ANTISENSE,SENSE	ENSG00000253452,ENSG00000254309	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p12ia	L1	L1	L1FLnI	chr8	36121490	36131848	-	noncoding	AC124290.1,AC124290.3	lncRNA,processed_pseudogene	ANTISENSE,SENSE	ENSG00000253452,ENSG00000254309	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p12ja	L1	L1	L1FLnI	chr8	36194759	36204893	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTCYBP19	ENSG00000253504	72870	AC124290.1	ENSG00000253452	3565	None	None
L1FLnI_8p12ka	L1	L1	L1FLnI	chr8	36388075	36398108	-	coding	AC090809.1	lncRNA	SENSE	ENSG00000253363	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p12la	L1	L1	L1FLnI	chr8	36407620	36417768	-	coding	AC090809.1	lncRNA	SENSE	ENSG00000253363	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p12ma	L1	L1	L1FLnI	chr8	36484142	36492835	-	coding	AC090809.1	lncRNA	SENSE	ENSG00000253363	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p12na	L1	L1	L1FLnI	chr8	36666614	36676033	-	noncoding	AC090809.1	lncRNA	SENSE	ENSG00000253363	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p11.23a	L1	L1	L1FLnI	chr8	36722264	36732405	+	noncoding	AC090809.1	lncRNA	ANTISENSE	ENSG00000253363	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p11.23b	L1	L1	L1FLnI	chr8	37275462	37285867	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SMARCE1P4	ENSG00000253650	180072	AC091182.1	ENSG00000253123	40708	chr8:37275850-37275924	None
L1FLnI_8p11.23c	L1	L1	L1FLnI	chr8	37456781	37466895	+	coding	LINC01605	lncRNA	ANTISENSE	ENSG00000253161	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p11.22a	L1	L1	L1FLnI	chr8	39137678	39147856	-	noncoding	ADAM32	protein_coding	ANTISENSE	ENSG00000197140	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p11.22b	L1	L1	L1FLnI	chr8	39199117	39209267	-	coding	ADAM32	protein_coding	ANTISENSE	ENSG00000197140	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p11.22c	L1	L1	L1FLnI	chr8	39297407	39307303	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105185.1	ENSG00000253160	2606	ADAM32	ENSG00000197140	12490	None	None
L1FLnI_8p11.22d	L1	L1	L1FLnI	chr8	39429479	39439667	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADAM5	ENSG00000196115	12101	ADAM3A	ENSG00000197475	11378	None	None
L1FLnI_8p11.22e	L1	L1	L1FLnI	chr8	39795559	39805938	-	noncoding	ADAM2	protein_coding	SENSE	ENSG00000104755	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p11.21a	L1	L1	L1FLnI	chr8	40015899	40026047	-	coding	IDO2	protein_coding	ANTISENSE	ENSG00000188676	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p11.21b	L1	L1	L1FLnI	chr8	40137725	40147844	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TCIM	ENSG00000176907	5638	AC022733.1	ENSG00000253665	10257	None	None
L1FLnI_8p11.21c	L1	L1	L1FLnI	chr8	40428714	40438740	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC105999.1	ENSG00000253354	26704	AC010857.1	ENSG00000272479	80825	None	None
L1FLnI_8p11.21d	L1	L1	L1FLnI	chr8	40643563	40653596	+	coding	ZMAT4	protein_coding	ANTISENSE	ENSG00000165061	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p11.21e	L1	L1	L1FLnI	chr8	41037871	41048309	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SFRP1	ENSG00000104332	213653	RNU6-356P	ENSG00000206867	4873	None	None
L1FLnI_8p11.21f	L1	L1	L1FLnI	chr8	41045035	41053685	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-356P	ENSG00000206867	12037	SFRP1	ENSG00000104332	208277	None	None
L1FLnI_8p11.21g	L1	L1	L1FLnI	chr8	41125927	41135229	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-356P	ENSG00000206867	92929	SFRP1	ENSG00000104332	126733	None	None
L1FLnI_8p11.21h	L1	L1	L1FLnI	chr8	41125927	41135181	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-356P	ENSG00000206867	92929	SFRP1	ENSG00000104332	126781	None	None
L1FLnI_8p11.21i	L1	L1	L1FLnI	chr8	41221510	41231611	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-356P	ENSG00000206867	188512	SFRP1	ENSG00000104332	30351	None	None
L1FLnI_8p11.21j	L1	L1	L1FLnI	chr8	41351453	41361531	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SNORD65B	ENSG00000238936	65124	SFRP1	ENSG00000104332	41980	None	None
L1FLnI_8p11.21k	L1	L1	L1FLnI	chr8	43183150	43193242	-	coding	HGSNAT	protein_coding	ANTISENSE	ENSG00000165102	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:43191433-43191442,chr8:43191478-43191490
L1FLnI_8p11.1a	L1	L1	L1FLnI	chr8	43260109	43270088	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AFG3L2P1	ENSG00000253606	110	AC022616.3	ENSG00000253186	6020	None	None
L1FLnI_8p11.1b	L1	L1	L1FLnI	chr8	43306789	43316776	-	coding	POTEA,AC022616.9	polymorphic_pseudogene,processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000188877,ENSG00000255497	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p11.1c	L1	L1	L1FLnI	chr8	43320024	43330078	-	noncoding	POTEA	polymorphic_pseudogene	ANTISENSE	ENSG00000188877	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p11.1d	L1	L1	L1FLnI	chr8	43343945	43354070	-	noncoding	POTEA	polymorphic_pseudogene	ANTISENSE	ENSG00000188877	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8p11.1e	L1	L1	L1FLnI	chr8	43390576	43400580	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC134698.1	ENSG00000250637	42322	AC022616.1	ENSG00000201329	12066	None	None
L1FLnI_8p11.1f	L1	L1	L1FLnI	chr8	43411844	43421325	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC134698.1	ENSG00000250637	21577	AC022616.1	ENSG00000201329	33334	None	None
L1FLnI_8p11.1g	L1	L1	L1FLnI	chr8	43453398	43463551	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC134698.4	ENSG00000254069	30386	AC134698.1	ENSG00000250637	486	None	None
L1FLnI_8p11.1h	L1	L1	L1FLnI	chr8	43476573	43486696	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC134698.1	ENSG00000250637	23661	AC134698.4	ENSG00000254069	7241	None	None
L1FLnI_8p11.1i	L1	L1	L1FLnI	chr8	43484963	43494439	+	coding	AC134698.4	processed_pseudogene	SENSE	ENSG00000254069	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q11.1a	L1	L1	L1FLnI	chr8	45979539	45989646	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC118650.1	ENSG00000276685	39158	AC139365.1	ENSG00000253198	2304948	None	None
L1FLnI_8q11.1b	L1	L1	L1FLnI	chr8	46698718	46708880	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021451.1	ENSG00000228984	75920	ASNSP4	ENSG00000251470	30	None	None
L1FLnI_8q11.1c	L1	L1	L1FLnI	chr8	46739391	46749529	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC021451.1	ENSG00000228984	35271	ASNSP4	ENSG00000251470	40703	None	None
L1FLnI_8q11.1d	L1	L1	L1FLnI	chr8	46751646	46761755	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021451.1	ENSG00000228984	23045	ASNSP4	ENSG00000251470	52958	None	None
L1FLnI_8q11.1e	L1	L1	L1FLnI	chr8	46793833	46803968	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRIM60P15	ENSG00000250857	769	AC021451.2	ENSG00000286484	6728	None	None
L1FLnI_8q11.1f	L1	L1	L1FLnI	chr8	46827658	46836501	+	coding	LINC00293,MTND2P38,MTND1P7,RNU6-656P	lncRNA,unprocessed_pseudogene,unprocessed_pseudogene,snRNA	SENSE,ANTISENSE,ANTISENSE,SENSE	ENSG00000253314,ENSG00000253828,ENSG00000282321,ENSG00000252594	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:46830633-46830644,chr8:46831056-46831068
L1FLnI_8q11.1g	L1	L1	L1FLnI	chr8	46890484	46900618	+	noncoding	LINC00293	lncRNA	SENSE	ENSG00000253314	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q11.1h	L1	L1	L1FLnI	chr8	47015210	47025252	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MAPK6P4	ENSG00000215179	40593	RN7SKP32	ENSG00000222099	42769	None	None
L1FLnI_8q11.1i	L1	L1	L1FLnI	chr8	47072016	47080984	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP32	ENSG00000222099	3693	AC120036.1	ENSG00000248347	8588	None	None
L1FLnI_8q11.1j	L1	L1	L1FLnI	chr8	47094518	47104480	-	coding	AC120036.1	unprocessed_pseudogene	SENSE	ENSG00000248347	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q11.1k	L1	L1	L1FLnI	chr8	47154792	47164769	+	coding	AC120036.1,RPL10AP2	unprocessed_pseudogene,processed_pseudogene	ANTISENSE,SENSE	ENSG00000248347,ENSG00000188873	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:47157082-47157087,chr8:47157697-47157704
L1FLnI_8q11.21a	L1	L1	L1FLnI	chr8	47296959	47307092	-	coding	SPIDR	protein_coding	ANTISENSE	ENSG00000164808	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q11.21b	L1	L1	L1FLnI	chr8	47313471	47323601	+	noncoding	SPIDR	protein_coding	SENSE	ENSG00000164808	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q11.21c	L1	L1	L1FLnI	chr8	47343470	47353603	-	coding	SPIDR	protein_coding	ANTISENSE	ENSG00000164808	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr8:47353050-47353317	None
L1FLnI_8q11.21d	L1	L1	L1FLnI	chr8	47397337	47405914	+	noncoding	SPIDR	protein_coding	SENSE	ENSG00000164808	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr8:47399094-47399285	chr8:47399094-47399102
L1FLnI_8q11.21e	L1	L1	L1FLnI	chr8	47416126	47426256	-	coding	SPIDR	protein_coding	ANTISENSE	ENSG00000164808	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:47423327-47423341
L1FLnI_8q11.21f	L1	L1	L1FLnI	chr8	47481373	47491506	+	noncoding	SPIDR	protein_coding	SENSE	ENSG00000164808	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q11.21g	L1	L1	L1FLnI	chr8	47499143	47509242	-	coding	SPIDR	protein_coding	ANTISENSE	ENSG00000164808	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q11.21h	L1	L1	L1FLnI	chr8	47548271	47558378	-	coding	SPIDR	protein_coding	ANTISENSE	ENSG00000164808	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q11.21i	L1	L1	L1FLnI	chr8	48162886	48173343	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104989.1	ENSG00000253843	20507	UBE2V2	ENSG00000169139	98178	None	None
L1FLnI_8q11.21j	L1	L1	L1FLnI	chr8	48202740	48212503	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104989.1	ENSG00000253843	8113	AC105029.1	ENSG00000253654	81523	None	None
L1FLnI_8q11.21k	L1	L1	L1FLnI	chr8	48333523	48343513	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL29P19	ENSG00000224594	41077	RNA5SP531	ENSG00000277418	16753	None	None
L1FLnI_8q11.21l	L1	L1	L1FLnI	chr8	48349267	48358392	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP531	ENSG00000277418	32497	RPL29P19	ENSG00000224594	26198	None	None
L1FLnI_8q11.21m	L1	L1	L1FLnI	chr8	48456712	48466869	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC026904.1	ENSG00000253140	48983	AC041040.1	ENSG00000279881	25671	None	None
L1FLnI_8q11.21n	L1	L1	L1FLnI	chr8	48482089	48492178	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC041040.1	ENSG00000279881	51048	AC026904.1	ENSG00000253140	23674	None	None
L1FLnI_8q11.21o	L1	L1	L1FLnI	chr8	48793407	48803430	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC100805.1	ENSG00000286878	14863	EFCAB1	ENSG00000034239	58096	None	None
L1FLnI_8q11.21p	L1	L1	L1FLnI	chr8	48953412	48963523	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC044893.2	ENSG00000286701	83129	AC013701.2	ENSG00000287788	22124	None	None
L1FLnI_8q11.21q	L1	L1	L1FLnI	chr8	49264268	49274815	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP294	ENSG00000199640	55395	AC044893.1	ENSG00000253474	35094	None	None
L1FLnI_8q11.21r	L1	L1	L1FLnI	chr8	49266084	49274815	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP294	ENSG00000199640	55395	AC044893.1	ENSG00000253474	36910	None	None
L1FLnI_8q11.21s	L1	L1	L1FLnI	chr8	49685218	49695410	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSAT1P1	ENSG00000253810	44806	AC090155.1	ENSG00000253206	130804	None	None
L1FLnI_8q11.21t	L1	L1	L1FLnI	chr8	49874775	49884766	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC023762.1	ENSG00000271148	22097	AC113145.1	ENSG00000253484	53831	None	None
L1FLnI_8q11.21u	L1	L1	L1FLnI	chr8	50147917	50158011	-	noncoding	SNTG1	protein_coding	ANTISENSE	ENSG00000147481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q11.21v	L1	L1	L1FLnI	chr8	50507419	50517560	-	coding	SNTG1	protein_coding	ANTISENSE	ENSG00000147481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q11.21w	L1	L1	L1FLnI	chr8	50511848	50521918	+	noncoding	SNTG1	protein_coding	SENSE	ENSG00000147481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q11.21x	L1	L1	L1FLnI	chr8	50605604	50614430	-	noncoding	SNTG1	protein_coding	ANTISENSE	ENSG00000147481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q11.21y	L1	L1	L1FLnI	chr8	50687355	50696902	-	coding	SNTG1	protein_coding	ANTISENSE	ENSG00000147481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q11.21z	L1	L1	L1FLnI	chr8	50777206	50787344	-	coding	SNTG1	protein_coding	ANTISENSE	ENSG00000147481	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q11.21aa	L1	L1	L1FLnI	chr8	50985988	50996106	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090919.1	ENSG00000201316	18915	AC087272.1	ENSG00000253340	125926	None	None
L1FLnI_8q11.22a	L1	L1	L1FLnI	chr8	51488799	51498938	+	coding	PXDNL	protein_coding	ANTISENSE	ENSG00000147485	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q11.22b	L1	L1	L1FLnI	chr8	51542895	51553331	+	noncoding	PXDNL	protein_coding	ANTISENSE	ENSG00000147485	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q11.22c	L1	L1	L1FLnI	chr8	51542895	51551575	+	noncoding	PXDNL	protein_coding	ANTISENSE	ENSG00000147485	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q11.22d	L1	L1	L1FLnI	chr8	51633340	51642866	+	coding	PXDNL	protein_coding	ANTISENSE	ENSG00000147485	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q11.23a	L1	L1	L1FLnI	chr8	52040844	52050984	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ST18	ENSG00000147488	59855	AC064807.2	ENSG00000253844	17870	None	None
L1FLnI_8q11.23b	L1	L1	L1FLnI	chr8	52065662	52074729	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ST18	ENSG00000147488	36110	AC064807.2	ENSG00000253844	42688	None	None
L1FLnI_8q11.23c	L1	L1	L1FLnI	chr8	52396342	52407294	-	noncoding	ST18	protein_coding	SENSE	ENSG00000147488	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:52399498-52399507,chr8:52399708-52399723,chr8:52400554-52400566,chr8:52400594-52400605,chr8:52401910-52401913
L1FLnI_8q11.23d	L1	L1	L1FLnI	chr8	52502973	52513118	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ST18	ENSG00000147488	42014	ALKAL1	ENSG00000196711	20919	None	None
L1FLnI_8q11.23e	L1	L1	L1FLnI	chr8	52846218	52856598	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPBWR1	ENSG00000183729	81833	RB1CC1	ENSG00000023287	100375	None	None
L1FLnI_8q11.23f	L1	L1	L1FLnI	chr8	53042670	53052791	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009646.1	ENSG00000250494	109548	AC009800.1	ENSG00000248911	66554	None	None
L1FLnI_8q11.23g	L1	L1	L1FLnI	chr8	53105984	53116445	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009646.1	ENSG00000250494	45894	AC009800.1	ENSG00000248911	129868	None	None
L1FLnI_8q11.23h	L1	L1	L1FLnI	chr8	53334153	53344313	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OPRK1	ENSG00000082556	82456	AC131902.1	ENSG00000260484	44388	chr8:53344251-53344405	None
L1FLnI_8q11.23i	L1	L1	L1FLnI	chr8	53365512	53375653	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OPRK1	ENSG00000082556	113815	AC131902.1	ENSG00000260484	13048	None	None
L1FLnI_8q11.23j	L1	L1	L1FLnI	chr8	53598788	53608168	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAPK6P1	ENSG00000206144	58488	AC103778.1	ENSG00000253668	104529	None	None
L1FLnI_8q11.23k	L1	L1	L1FLnI	chr8	53606145	53616029	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAPK6P1	ENSG00000206144	65845	AC103778.1	ENSG00000253668	96668	None	None
L1FLnI_8q11.23l	L1	L1	L1FLnI	chr8	53636153	53646426	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC103778.1	ENSG00000253668	66271	MAPK6P1	ENSG00000206144	95853	None	None
L1FLnI_8q11.23m	L1	L1	L1FLnI	chr8	53694664	53704452	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC103778.1	ENSG00000253668	8245	MAPK6P1	ENSG00000206144	154364	None	None
L1FLnI_8q11.23n	L1	L1	L1FLnI	chr8	53780045	53790172	-	coding	ATP6V1H	protein_coding	SENSE	ENSG00000047249	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q11.23o	L1	L1	L1FLnI	chr8	53928686	53937561	+	noncoding	RGS20	protein_coding	SENSE	ENSG00000147509	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q11.23p	L1	L1	L1FLnI	chr8	54316685	54325554	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC044836.1	ENSG00000253840	68779	RNU105C	ENSG00000199212	5133	None	None
L1FLnI_8q11.23q	L1	L1	L1FLnI	chr8	54580490	54590642	-	coding	RP1	protein_coding	ANTISENSE	ENSG00000104237	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q11.23r	L1	L1	L1FLnI	chr8	54580506	54590642	-	coding	RP1	protein_coding	ANTISENSE	ENSG00000104237	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.1a	L1	L1	L1FLnI	chr8	54601541	54611680	-	coding	RP1	protein_coding	ANTISENSE	ENSG00000104237	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.1b	L1	L1	L1FLnI	chr8	54786519	54795857	+	coding	RP1	protein_coding	SENSE	ENSG00000104237	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.1c	L1	L1	L1FLnI	chr8	54921966	54931153	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RP1	ENSG00000104237	50246	AC084834.1	ENSG00000286348	136432	None	None
L1FLnI_8q12.1d	L1	L1	L1FLnI	chr8	55046403	55056499	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RP1	ENSG00000104237	174683	AC084834.1	ENSG00000286348	11086	None	None
L1FLnI_8q12.1e	L1	L1	L1FLnI	chr8	55456996	55467144	+	coding	XKR4	protein_coding	SENSE	ENSG00000206579	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.1f	L1	L1	L1FLnI	chr8	55472930	55483056	+	noncoding	XKR4	protein_coding	SENSE	ENSG00000206579	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.1g	L1	L1	L1FLnI	chr8	55612247	55622109	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	XKR4	ENSG00000206579	70193	TMEM68	ENSG00000167904	74315	None	None
L1FLnI_8q12.1h	L1	L1	L1FLnI	chr8	55652652	55662803	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	XKR4	ENSG00000206579	110598	TMEM68	ENSG00000167904	33621	None	None
L1FLnI_8q12.1i	L1	L1	L1FLnI	chr8	56145654	56155789	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PLAG1	ENSG00000181690	5120	AC107376.1	ENSG00000221093	24302	None	None
L1FLnI_8q12.1j	L1	L1	L1FLnI	chr8	56259906	56269956	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SDR16C5	ENSG00000170786	30054	AC107952.1	ENSG00000254216	6534	None	None
L1FLnI_8q12.1k	L1	L1	L1FLnI	chr8	56333290	56342386	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SDR16C6P	ENSG00000253542	30678	SDR16C5	ENSG00000170786	12514	None	None
L1FLnI_8q12.1l	L1	L1	L1FLnI	chr8	56350705	56360847	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SDR16C6P	ENSG00000253542	12217	SDR16C5	ENSG00000170786	29929	None	None
L1FLnI_8q12.1m	L1	L1	L1FLnI	chr8	56411723	56421752	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SDR16C6P	ENSG00000253542	16358	PENK	ENSG00000181195	14922	None	None
L1FLnI_8q12.1n	L1	L1	L1FLnI	chr8	56425612	56434141	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SDR16C6P	ENSG00000253542	30247	PENK	ENSG00000181195	2533	None	None
L1FLnI_8q12.1o	L1	L1	L1FLnI	chr8	56806075	56816225	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-13P	ENSG00000206975	100859	AC009597.2	ENSG00000270328	29201	None	None
L1FLnI_8q12.1p	L1	L1	L1FLnI	chr8	57158143	57168155	-	coding	LINC01606	lncRNA	ANTISENSE	ENSG00000253301	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.1q	L1	L1	L1FLnI	chr8	57267980	57276810	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00588	ENSG00000215117	2733	AC025674.2	ENSG00000253614	1367	None	None
L1FLnI_8q12.1r	L1	L1	L1FLnI	chr8	57320450	57330513	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068075.1	ENSG00000253871	10508	RNU6-596P	ENSG00000202265	30801	None	None
L1FLnI_8q12.1s	L1	L1	L1FLnI	chr8	57691365	57701744	+	noncoding	AC104051.1	lncRNA	ANTISENSE	ENSG00000253322	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.1t	L1	L1	L1FLnI	chr8	57732643	57742847	-	noncoding	AC104051.1	lncRNA	SENSE	ENSG00000253322	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.1u	L1	L1	L1FLnI	chr8	57732643	57742098	-	noncoding	AC104051.1	lncRNA	SENSE	ENSG00000253322	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.1v	L1	L1	L1FLnI	chr8	58328083	58336790	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092819.2	ENSG00000286578	55633	UBXN2B	ENSG00000215114	74569	None	None
L1FLnI_8q12.1w	L1	L1	L1FLnI	chr8	58366659	58376683	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092819.2	ENSG00000286578	94209	UBXN2B	ENSG00000215114	34676	None	None
L1FLnI_8q12.1x	L1	L1	L1FLnI	chr8	58366659	58376673	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092819.2	ENSG00000286578	94209	UBXN2B	ENSG00000215114	34686	None	None
L1FLnI_8q12.1y	L1	L1	L1FLnI	chr8	58911192	58921217	+	coding	TOX	protein_coding	ANTISENSE	ENSG00000198846	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.1z	L1	L1	L1FLnI	chr8	59168157	59178179	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP267	ENSG00000201763	277706	AC087698.1	ENSG00000206853	30655	None	chr8:59177647-59177648
L1FLnI_8q12.1aa	L1	L1	L1FLnI	chr8	59221429	59230238	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087698.1	ENSG00000206853	83927	RNA5SP267	ENSG00000201763	225647	chr8:59221374-59221674	chr8:59229534-59229540
L1FLnI_8q12.1ba	L1	L1	L1FLnI	chr8	59377549	59387123	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087698.1	ENSG00000206853	240047	RNA5SP267	ENSG00000201763	68762	None	None
L1FLnI_8q12.1ca	L1	L1	L1FLnI	chr8	59439923	59451473	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP267	ENSG00000201763	4412	AC087698.1	ENSG00000206853	302421	None	None
L1FLnI_8q12.1da	L1	L1	L1FLnI	chr8	59456336	59466472	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC087664.3	ENSG00000254150	91056	RNA5SP267	ENSG00000201763	326	None	None
L1FLnI_8q12.1ea	L1	L1	L1FLnI	chr8	59488651	59499046	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087664.3	ENSG00000254150	58482	RNA5SP267	ENSG00000201763	32641	None	None
L1FLnI_8q12.1fa	L1	L1	L1FLnI	chr8	59788286	59797424	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107934.1	ENSG00000253413	28023	AC107934.2	ENSG00000253723	23700	None	None
L1FLnI_8q12.1ga	L1	L1	L1FLnI	chr8	59851214	59860694	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC107934.2	ENSG00000253723	29781	AC022709.1	ENSG00000278428	33162	None	None
L1FLnI_8q12.1ha	L1	L1	L1FLnI	chr8	59869301	59879322	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC022709.1	ENSG00000278428	14534	AC107934.2	ENSG00000253723	47868	None	None
L1FLnI_8q12.1ia	L1	L1	L1FLnI	chr8	59878358	59888508	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC107934.2	ENSG00000253723	56925	AC022709.1	ENSG00000278428	5348	None	None
L1FLnI_8q12.1ja	L1	L1	L1FLnI	chr8	59983129	59992002	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021393.1	ENSG00000254775	54753	AC022709.1	ENSG00000278428	89187	None	None
L1FLnI_8q12.1ka	L1	L1	L1FLnI	chr8	60076406	60086899	-	coding	AC021393.1	lncRNA	ANTISENSE	ENSG00000254775	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.1la	L1	L1	L1FLnI	chr8	60124174	60134299	-	noncoding	AC021393.1	lncRNA	ANTISENSE	ENSG00000254775	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.1ma	L1	L1	L1FLnI	chr8	60152317	60160861	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC2A13P1	ENSG00000254954	10175	CA8	ENSG00000178538	24551	None	chr8:60152368-60152374
L1FLnI_8q12.1na	L1	L1	L1FLnI	chr8	60156864	60167017	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC2A13P1	ENSG00000254954	14722	CA8	ENSG00000178538	18395	None	None
L1FLnI_8q12.2a	L1	L1	L1FLnI	chr8	61114877	61124894	-	coding	CLVS1	protein_coding	ANTISENSE	ENSG00000177182	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.2b	L1	L1	L1FLnI	chr8	61173035	61182197	+	noncoding	CLVS1	protein_coding	SENSE	ENSG00000177182	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.2c	L1	L1	L1FLnI	chr8	61184627	61194031	+	noncoding	CLVS1	protein_coding	SENSE	ENSG00000177182	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.2d	L1	L1	L1FLnI	chr8	61218669	61228194	-	noncoding	CLVS1	protein_coding	ANTISENSE	ENSG00000177182	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.2e	L1	L1	L1FLnI	chr8	61248421	61258554	-	coding	CLVS1	protein_coding	ANTISENSE	ENSG00000177182	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.2f	L1	L1	L1FLnI	chr8	61267517	61277514	-	coding	CLVS1,AC023866.2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000177182,ENSG00000254222	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.3a	L1	L1	L1FLnI	chr8	61474298	61484231	-	coding	CLVS1	protein_coding	ANTISENSE	ENSG00000177182	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.3b	L1	L1	L1FLnI	chr8	61844498	61854656	-	coding	LINC02842	lncRNA	ANTISENSE	ENSG00000254119	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.3c	L1	L1	L1FLnI	chr8	61990804	62000827	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02842	ENSG00000254119	46624	NARS1P2	ENSG00000253789	109697	None	None
L1FLnI_8q12.3d	L1	L1	L1FLnI	chr8	62161733	62171197	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104852.1	ENSG00000237810	16964	AC023095.1	ENSG00000285971	19891	None	chr8:62164796-62164822,chr8:62164847-62164862
L1FLnI_8q12.3e	L1	L1	L1FLnI	chr8	62219628	62230096	+	noncoding	AC023095.1	lncRNA	ANTISENSE	ENSG00000285971	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.3f	L1	L1	L1FLnI	chr8	62237027	62246189	-	noncoding	AC023095.1	lncRNA	SENSE	ENSG00000285971	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.3g	L1	L1	L1FLnI	chr8	62287743	62297845	-	coding	NKAIN3	protein_coding	ANTISENSE	ENSG00000185942	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.3h	L1	L1	L1FLnI	chr8	62315788	62325974	-	coding	NKAIN3	protein_coding	ANTISENSE	ENSG00000185942	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.3i	L1	L1	L1FLnI	chr8	62706189	62716638	-	noncoding	NKAIN3	protein_coding	ANTISENSE	ENSG00000185942	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.3j	L1	L1	L1FLnI	chr8	62706593	62716638	-	noncoding	NKAIN3	protein_coding	ANTISENSE	ENSG00000185942	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.3k	L1	L1	L1FLnI	chr8	62773374	62783065	-	noncoding	NKAIN3	protein_coding	ANTISENSE	ENSG00000185942	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.3l	L1	L1	L1FLnI	chr8	62797135	62807316	+	coding	NKAIN3	protein_coding	SENSE	ENSG00000185942	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.3m	L1	L1	L1FLnI	chr8	62827127	62836834	+	noncoding	NKAIN3	protein_coding	SENSE	ENSG00000185942	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.3n	L1	L1	L1FLnI	chr8	62933657	62944182	+	noncoding	NKAIN3	protein_coding	SENSE	ENSG00000185942	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.3o	L1	L1	L1FLnI	chr8	62972177	62982667	-	noncoding	NKAIN3,NKAIN3-IT1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000185942,ENSG00000274956	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.3p	L1	L1	L1FLnI	chr8	63483808	63493836	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC018953.1	ENSG00000253583	92164	AC011124.2	ENSG00000253894	5063	chr8:63492940-63493213	None
L1FLnI_8q12.3q	L1	L1	L1FLnI	chr8	63504253	63514392	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC018953.1	ENSG00000253583	71608	AC011124.2	ENSG00000253894	25508	None	None
L1FLnI_8q12.3r	L1	L1	L1FLnI	chr8	63504270	63514392	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC018953.1	ENSG00000253583	71608	AC011124.2	ENSG00000253894	25525	None	None
L1FLnI_8q12.3s	L1	L1	L1FLnI	chr8	63754570	63765663	-	noncoding	LINC01414	lncRNA	SENSE	ENSG00000253554	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_8q12.3	L1	L1	L1ORF2	chr8	63796396	63804441	-	coding	LINC01414,LINC01289	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000253554,ENSG00000253734	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.3t	L1	L1	L1FLnI	chr8	63860051	63868680	-	noncoding	LINC01414	lncRNA	SENSE	ENSG00000253554	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.3u	L1	L1	L1FLnI	chr8	63860051	63868732	-	noncoding	LINC01414	lncRNA	SENSE	ENSG00000253554	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.3v	L1	L1	L1FLnI	chr8	64057646	64067199	+	noncoding	LINC01414	lncRNA	ANTISENSE	ENSG00000253554	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.3w	L1	L1	L1FLnI	chr8	64080179	64090309	+	coding	LINC01414	lncRNA	ANTISENSE	ENSG00000253554	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.3x	L1	L1	L1FLnI	chr8	64098730	64108866	+	coding	LINC01414	lncRNA	ANTISENSE	ENSG00000253554	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.3y	L1	L1	L1FLnI	chr8	64236599	64246624	+	coding	LINC01414	lncRNA	ANTISENSE	ENSG00000253554	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.3z	L1	L1	L1FLnI	chr8	64236599	64246640	+	coding	LINC01414	lncRNA	ANTISENSE	ENSG00000253554	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.3aa	L1	L1	L1FLnI	chr8	64316222	64326164	-	coding	LINC01414	lncRNA	SENSE	ENSG00000253554	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q12.3ba	L1	L1	L1FLnI	chr8	64399342	64409535	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012535.1	ENSG00000287615	46663	MIR124-2HG	ENSG00000254377	15555	None	None
L1FLnI_8q12.3ca	L1	L1	L1FLnI	chr8	64924830	64935191	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087808.1	ENSG00000253493	38297	AC104232.3	ENSG00000287998	62460	None	None
L1FLnI_8q12.3da	L1	L1	L1FLnI	chr8	64950625	64962217	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104232.3	ENSG00000287998	88255	AC087808.1	ENSG00000253493	11271	None	None
L1FLnI_8q12.3ea	L1	L1	L1FLnI	chr8	65067022	65075738	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL31P41	ENSG00000239261	79669	AC087808.1	ENSG00000253493	93174	None	None
L1FLnI_8q13.1a	L1	L1	L1FLnI	chr8	65117146	65127160	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC087808.1	ENSG00000253493	143298	RPL31P41	ENSG00000239261	28247	None	None
L1FLnI_8q13.1b	L1	L1	L1FLnI	chr8	65129994	65139786	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087808.1	ENSG00000253493	156146	RPL31P41	ENSG00000239261	15621	None	None
L1FLnI_8q13.1c	L1	L1	L1FLnI	chr8	65376139	65386663	+	noncoding	PPIAP86	processed_pseudogene	SENSE	ENSG00000213873	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.1d	L1	L1	L1FLnI	chr8	65887230	65896558	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC100812.1	ENSG00000272192	43899	DNAJC5B	ENSG00000147570	124995	None	None
L1FLnI_8q13.1e	L1	L1	L1FLnI	chr8	65887230	65896233	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC100812.1	ENSG00000272192	43899	DNAJC5B	ENSG00000147570	125320	None	None
L1FLnI_8q13.1f	L1	L1	L1FLnI	chr8	65992353	66002421	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DNAJC5B	ENSG00000147570	19132	AC100812.1	ENSG00000272192	149022	None	None
L1FLnI_8q13.1g	L1	L1	L1FLnI	chr8	66314307	66323894	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00967	ENSG00000253138	116992	AC009879.4	ENSG00000287127	39880	None	None
L1FLnI_8q13.1h	L1	L1	L1FLnI	chr8	66948605	66958619	-	coding	TCF24	protein_coding	SENSE	ENSG00000261787	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.2a	L1	L1	L1FLnI	chr8	67352435	67362575	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011037.1	ENSG00000241961	43940	AC021321.1	ENSG00000271966	7348	None	None
L1FLnI_8q13.2b	L1	L1	L1FLnI	chr8	67589393	67599536	-	coding	CPA6	protein_coding	SENSE	ENSG00000165078	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.2c	L1	L1	L1FLnI	chr8	67589403	67599536	-	coding	CPA6	protein_coding	SENSE	ENSG00000165078	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.2d	L1	L1	L1FLnI	chr8	68346459	68355182	-	noncoding	C8orf34	protein_coding	ANTISENSE	ENSG00000165084	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.2e	L1	L1	L1FLnI	chr8	68358980	68368411	+	coding	C8orf34	protein_coding	SENSE	ENSG00000165084	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.2f	L1	L1	L1FLnI	chr8	68456302	68466460	+	coding	C8orf34	protein_coding	SENSE	ENSG00000165084	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.2g	L1	L1	L1FLnI	chr8	68456302	68466440	+	coding	C8orf34	protein_coding	SENSE	ENSG00000165084	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.2h	L1	L1	L1FLnI	chr8	68612798	68621503	-	coding	C8orf34	protein_coding	ANTISENSE	ENSG00000165084	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.2i	L1	L1	L1FLnI	chr8	68706800	68716818	+	noncoding	C8orf34	protein_coding	SENSE	ENSG00000165084	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.2j	L1	L1	L1FLnI	chr8	68739855	68749898	+	coding	C8orf34	protein_coding	SENSE	ENSG00000165084	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.2k	L1	L1	L1FLnI	chr8	69015506	69025643	+	coding	LINC01592	lncRNA	ANTISENSE	ENSG00000253658	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.2l	L1	L1	L1FLnI	chr8	69015506	69025650	+	coding	LINC01592	lncRNA	ANTISENSE	ENSG00000253658	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.2m	L1	L1	L1FLnI	chr8	69211542	69220682	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021785.1	ENSG00000253373	33353	LINC01603	ENSG00000253479	204167	None	None
L1FLnI_8q13.2n	L1	L1	L1FLnI	chr8	69250721	69260749	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC021785.1	ENSG00000253373	72532	LINC01603	ENSG00000253479	164100	None	None
L1FLnI_8q13.2o	L1	L1	L1FLnI	chr8	69276400	69286862	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021785.1	ENSG00000253373	98211	LINC01603	ENSG00000253479	137987	None	None
L1FLnI_8q13.2p	L1	L1	L1FLnI	chr8	69350887	69360934	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01603	ENSG00000253479	63915	AC021785.1	ENSG00000253373	172698	None	None
L1FLnI_8q13.3a	L1	L1	L1FLnI	chr8	69839802	69849923	+	noncoding	AC079089.1	lncRNA	SENSE	ENSG00000246528	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.3b	L1	L1	L1FLnI	chr8	69903757	69914194	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079089.2	ENSG00000255107	43217	RN7SL675P	ENSG00000239580	8557	None	None
L1FLnI_8q13.3c	L1	L1	L1FLnI	chr8	69903757	69914212	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079089.2	ENSG00000255107	43217	RN7SL675P	ENSG00000239580	8539	None	None
L1FLnI_8q13.3d	L1	L1	L1FLnI	chr8	70459751	70469669	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC022730.3	ENSG00000253143	1443	AC022730.2	ENSG00000241204	35175	None	None
L1FLnI_8q13.3e	L1	L1	L1FLnI	chr8	70561254	70571919	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC120194.1	ENSG00000287230	25608	TRAM1	ENSG00000067167	1299	None	None
L1FLnI_8q13.3f	L1	L1	L1FLnI	chr8	70694681	70704831	-	coding	XKR9,AC015687.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000221947,ENSG00000285579	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr8:70701510-70701515
L1FLnI_8q13.3g	L1	L1	L1FLnI	chr8	70717806	70727387	-	coding	XKR9,AC015687.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000221947,ENSG00000285579	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.3h	L1	L1	L1FLnI	chr8	70734969	70744679	-	coding	XKR9,AC015687.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000221947,ENSG00000285579	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.3i	L1	L1	L1FLnI	chr8	70734982	70744679	-	coding	XKR9,AC015687.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000221947,ENSG00000285579	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.3j	L1	L1	L1FLnI	chr8	70804824	70814958	+	coding	AC015687.1	lncRNA	SENSE	ENSG00000285579	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.3k	L1	L1	L1FLnI	chr8	70839946	70849119	+	coding	AC015687.1	lncRNA	SENSE	ENSG00000285579	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.3l	L1	L1	L1FLnI	chr8	70851621	70860635	+	coding	AC015687.1	lncRNA	SENSE	ENSG00000285579	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.3m	L1	L1	L1FLnI	chr8	70874056	70882773	+	noncoding	AC015687.1	lncRNA	SENSE	ENSG00000285579	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.3n	L1	L1	L1FLnI	chr8	70889706	70898937	-	noncoding	AC015687.1	lncRNA	ANTISENSE	ENSG00000285579	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.3o	L1	L1	L1FLnI	chr8	70900164	70909783	-	coding	AC015687.1	lncRNA	ANTISENSE	ENSG00000285579	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.3p	L1	L1	L1FLnI	chr8	70973746	70983896	-	noncoding	AC015687.1	lncRNA	ANTISENSE	ENSG00000285579	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.3q	L1	L1	L1FLnI	chr8	71392805	71402909	-	coding	EYA1	protein_coding	SENSE	ENSG00000104313	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.3r	L1	L1	L1FLnI	chr8	71392815	71402909	-	coding	EYA1	protein_coding	SENSE	ENSG00000104313	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.3s	L1	L1	L1FLnI	chr8	71402862	71412886	+	coding	EYA1	protein_coding	ANTISENSE	ENSG00000104313	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.3t	L1	L1	L1FLnI	chr8	71448295	71458394	+	noncoding	EYA1,TRAPPC2P2	protein_coding,processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000104313,ENSG00000253124	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.3u	L1	L1	L1FLnI	chr8	71578120	71588262	+	coding	EYA1	protein_coding	ANTISENSE	ENSG00000104313	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q13.3v	L1	L1	L1FLnI	chr8	71741020	71750021	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104012.2	ENSG00000253287	29584	AC009446.1	ENSG00000254277	38234	None	None
L1FLnI_8q13.3w	L1	L1	L1FLnI	chr8	71816763	71826903	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104012.1	ENSG00000200191	1138	MSC-AS1	ENSG00000235531	1264	None	None
L1FLnI_8q13.3x	L1	L1	L1FLnI	chr8	71933632	71943473	-	noncoding	MSC-AS1	lncRNA	ANTISENSE	ENSG00000235531	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_8q21.11a	L1	L1	L1FLI	chr8	72146430	72154468	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC078906.1	ENSG00000253317	41866	MSC-AS1	ENSG00000235531	28037	None	None
L1FLnI_8q21.11a	L1	L1	L1FLnI	chr8	72165652	72174493	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC078906.1	ENSG00000253317	21841	MSC-AS1	ENSG00000235531	47259	None	None
L1FLnI_8q21.11b	L1	L1	L1FLnI	chr8	72165685	72174493	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC078906.1	ENSG00000253317	21841	MSC-AS1	ENSG00000235531	47292	None	None
L1FLnI_8q21.11c	L1	L1	L1FLnI	chr8	72180870	72190509	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MSC-AS1	ENSG00000235531	62477	AC078906.1	ENSG00000253317	5825	None	None
L1FLnI_8q21.11d	L1	L1	L1FLnI	chr8	72253126	72262300	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022905.1	ENSG00000250979	1561	RNA5SP271	ENSG00000252509	95428	None	None
L1FLnI_8q21.11e	L1	L1	L1FLnI	chr8	72287555	72297785	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022905.1	ENSG00000250979	35990	RNA5SP271	ENSG00000252509	59943	None	None
L1FLnI_8q21.11f	L1	L1	L1FLnI	chr8	72302801	72312770	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP271	ENSG00000252509	44958	AC022905.1	ENSG00000250979	51236	None	None
L1FLnI_8q21.11g	L1	L1	L1FLnI	chr8	72317642	72327630	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022905.1	ENSG00000250979	66077	RNA5SP271	ENSG00000252509	30098	chr8:72318626-72318768	None
L1FLnI_8q21.11h	L1	L1	L1FLnI	chr8	72347500	72356452	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP271	ENSG00000252509	1276	AC022905.1	ENSG00000250979	95935	None	None
L1FLnI_8q21.11i	L1	L1	L1FLnI	chr8	72371658	72380702	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP271	ENSG00000252509	13843	AC124293.1	ENSG00000212989	48918	None	None
L1FLnI_8q21.11j	L1	L1	L1FLnI	chr8	72401304	72411836	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP271	ENSG00000252509	43489	AC124293.1	ENSG00000212989	17784	None	None
L1FLnI_8q21.11k	L1	L1	L1FLnI	chr8	72401304	72411849	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP271	ENSG00000252509	43489	AC124293.1	ENSG00000212989	17771	None	None
L1ORF2_8q21.11	L1	L1	L1ORF2	chr8	72478433	72486477	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC011131.1	ENSG00000254347	7461	KCNB2	ENSG00000182674	50748	None	None
L1FLnI_8q21.11l	L1	L1	L1FLnI	chr8	72709184	72719323	+	coding	KCNB2	protein_coding	SENSE	ENSG00000182674	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.11m	L1	L1	L1FLnI	chr8	72839414	72849812	-	noncoding	KCNB2	protein_coding	ANTISENSE	ENSG00000182674	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_8q21.11b	L1	L1	L1FLI	chr8	72874544	72882593	-	coding	KCNB2,AC090735.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000182674,ENSG00000253784	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:72881878-72881887,chr8:72882379-72882415,chr8:72881770-72881803
L1FLnI_8q21.11n	L1	L1	L1FLnI	chr8	73052851	73062406	+	coding	AC022893.1	lncRNA	SENSE	ENSG00000253636	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:73056113-73056117
L1FLnI_8q21.11o	L1	L1	L1FLnI	chr8	73234368	73244584	-	coding	C8orf89	protein_coding	SENSE	ENSG00000274443	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.11p	L1	L1	L1FLnI	chr8	73565358	73575418	+	noncoding	STAU2	protein_coding	ANTISENSE	ENSG00000040341	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.11q	L1	L1	L1FLnI	chr8	73676798	73685407	+	noncoding	STAU2,AC027018.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000040341,ENSG00000254538	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.11r	L1	L1	L1FLnI	chr8	74012390	74022585	+	coding	LY96	protein_coding	SENSE	ENSG00000154589	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr8:74014378-74014507	None
L1FLnI_8q21.11s	L1	L1	L1FLnI	chr8	74152707	74163144	+	noncoding	AC087627.1	lncRNA	SENSE	ENSG00000253983	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.11t	L1	L1	L1FLnI	chr8	74384679	74395143	-	noncoding	GDAP1	protein_coding	ANTISENSE	ENSG00000104381	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.11u	L1	L1	L1FLnI	chr8	74395862	74406206	-	coding	GDAP1	protein_coding	ANTISENSE	ENSG00000104381	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.11v	L1	L1	L1FLnI	chr8	74472551	74482595	-	noncoding	GDAP1	protein_coding	ANTISENSE	ENSG00000104381	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.11w	L1	L1	L1FLnI	chr8	74593737	74603752	-	coding	MIR2052HG,AC115837.1	lncRNA,processed_pseudogene	ANTISENSE,SENSE	ENSG00000254349,ENSG00000253341	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr8:74603009-74603319	chr8:74603629-74603664,chr8:74603745-74603756
L1FLnI_8q21.12	L1	L1	L1FLnI	chr8	74690556	74699196	+	noncoding	MIR2052HG	lncRNA	SENSE	ENSG00000254349	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.13a	L1	L1	L1FLnI	chr8	74863021	74873045	+	coding	AC011632.1	lncRNA	ANTISENSE	ENSG00000253706	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.13b	L1	L1	L1FLnI	chr8	74942139	74952178	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CRISPLD1	ENSG00000121005	32327	AC011632.2	ENSG00000254043	45837	None	None
L1FLnI_8q21.13c	L1	L1	L1FLnI	chr8	74942154	74952178	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CRISPLD1	ENSG00000121005	32327	AC011632.2	ENSG00000254043	45852	None	None
L1FLnI_8q21.13d	L1	L1	L1FLnI	chr8	75053163	75062469	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CRISPLD1	ENSG00000121005	18605	AC022274.1	ENSG00000253712	105235	None	None
L1FLnI_8q21.13e	L1	L1	L1FLnI	chr8	75178140	75186699	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022274.1	ENSG00000253712	1484	CASC9	ENSG00000249395	36428	None	None
L1FLnI_8q21.13f	L1	L1	L1FLnI	chr8	75201816	75212298	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CASC9	ENSG00000249395	10829	AC022274.1	ENSG00000253712	25160	None	None
L1FLnI_8q21.13g	L1	L1	L1FLnI	chr8	75274869	75284902	+	coding	CASC9	lncRNA	ANTISENSE	ENSG00000249395	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.13h	L1	L1	L1FLnI	chr8	75320723	75330725	+	coding	CASC9	lncRNA	ANTISENSE	ENSG00000249395	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_8q21.13	L1	L1	L1ORF2	chr8	75441411	75449456	+	coding	HNF4G	protein_coding	SENSE	ENSG00000164749	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.13i	L1	L1	L1FLnI	chr8	75620826	75630855	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC011029.1	ENSG00000287352	531264	HNF4G	ENSG00000164749	53992	None	None
L1FLnI_8q21.13j	L1	L1	L1FLnI	chr8	76060123	76068926	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HNF4G	ENSG00000164749	493289	AC011029.1	ENSG00000287352	93193	None	None
L1FLnI_8q21.13k	L1	L1	L1FLnI	chr8	76085438	76094062	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011029.1	ENSG00000287352	68057	HNF4G	ENSG00000164749	518604	None	None
L1FLnI_8q21.13l	L1	L1	L1FLnI	chr8	76178300	76186988	-	noncoding	AC011029.1	lncRNA	SENSE	ENSG00000287352	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.13m	L1	L1	L1FLnI	chr8	76304618	76314619	+	coding	AC011029.1	lncRNA	ANTISENSE	ENSG00000287352	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.13n	L1	L1	L1FLnI	chr8	76356509	76366324	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC011029.1	ENSG00000287352	48194	AC067773.1	ENSG00000270866	37674	None	None
L1FLnI_8q21.13o	L1	L1	L1FLnI	chr8	76435932	76446070	-	noncoding	LINC01111	lncRNA	ANTISENSE	ENSG00000254300	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.13p	L1	L1	L1FLnI	chr8	76895600	76905731	-	coding	AC023200.1	lncRNA	ANTISENSE	ENSG00000253416	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.13q	L1	L1	L1FLnI	chr8	77084913	77094944	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HIGD1AP18	ENSG00000253952	70885	AC062004.1	ENSG00000254366	304128	None	None
L1FLnI_8q21.13r	L1	L1	L1FLnI	chr8	77361047	77370154	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HIGD1AP18	ENSG00000253952	347019	AC062004.1	ENSG00000254366	28918	None	None
L1FLnI_8q21.13s	L1	L1	L1FLnI	chr8	77544477	77555249	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084706.1	ENSG00000254001	592852	AC062004.1	ENSG00000254366	7187	None	None
L1FLnI_8q21.13t	L1	L1	L1FLnI	chr8	77548452	77557116	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC062004.1	ENSG00000254366	11162	AC084706.1	ENSG00000254001	590985	None	None
L1FLnI_8q21.13u	L1	L1	L1FLnI	chr8	77571539	77580683	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC062004.1	ENSG00000254366	34249	AC084706.1	ENSG00000254001	567418	None	None
L1FLnI_8q21.13v	L1	L1	L1FLnI	chr8	77693275	77703634	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084706.1	ENSG00000254001	444467	AC062004.1	ENSG00000254366	155985	None	None
L1FLnI_8q21.13w	L1	L1	L1FLnI	chr8	77784649	77793478	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084706.1	ENSG00000254001	354623	AC062004.1	ENSG00000254366	247359	None	None
L1FLnI_8q21.13x	L1	L1	L1FLnI	chr8	77826132	77836341	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC062004.1	ENSG00000254366	288842	AC084706.1	ENSG00000254001	311760	None	None
L1FLnI_8q21.13y	L1	L1	L1FLnI	chr8	77937015	77947026	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC062004.1	ENSG00000254366	399725	AC084706.1	ENSG00000254001	201075	None	None
L1FLnI_8q21.13z	L1	L1	L1FLnI	chr8	77973257	77983360	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC084706.1	ENSG00000254001	164741	AC062004.1	ENSG00000254366	435967	None	None
L1FLnI_8q21.13aa	L1	L1	L1FLnI	chr8	78347009	78357160	+	coding	PKIA-AS1	lncRNA	ANTISENSE	ENSG00000254266	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.13ba	L1	L1	L1FLnI	chr8	78441387	78451491	+	coding	PKIA-AS1	lncRNA	ANTISENSE	ENSG00000254266	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.13ca	L1	L1	L1FLnI	chr8	78777983	78787051	-	noncoding	IL7	protein_coding	SENSE	ENSG00000104432	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.13da	L1	L1	L1FLnI	chr8	78811321	78820920	-	noncoding	AC083837.1	lncRNA	ANTISENSE	ENSG00000285744	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr8:78811684-78811698,chr8:78816563-78816571,chr8:78818596-78818600
L1FLnI_8q21.13ea	L1	L1	L1FLnI	chr8	78864890	78874773	-	noncoding	AC083837.1	lncRNA	ANTISENSE	ENSG00000285744	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr8:78869572-78869580
L1FLnI_8q21.13fa	L1	L1	L1FLnI	chr8	79030168	79040602	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC083837.1	ENSG00000285744	74086	AC138646.1	ENSG00000253659	218800	None	None
L1FLnI_8q21.13ga	L1	L1	L1FLnI	chr8	79531027	79541403	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL3P9	ENSG00000240540	29750	AC100870.1	ENSG00000253391	10378	None	None
L1FLnI_8q21.13ha	L1	L1	L1FLnI	chr8	79555901	79564638	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL3P9	ENSG00000240540	6515	AC100870.1	ENSG00000253391	35252	None	None
L1FLnI_8q21.13ia	L1	L1	L1FLnI	chr8	79978778	79988932	+	coding	MRPS28,AC036214.3	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000147586,ENSG00000276418	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr8:79979913-79979914
L1FLnI_8q21.13ja	L1	L1	L1FLnI	chr8	80000022	80009935	+	coding	MRPS28,AC036214.3	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000147586,ENSG00000276418	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.13ka	L1	L1	L1FLnI	chr8	80000022	80009951	+	coding	MRPS28,AC036214.3	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000147586,ENSG00000276418	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.13la	L1	L1	L1FLnI	chr8	80645693	80655847	+	coding	ZNF704	protein_coding	ANTISENSE	ENSG00000164684	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.13ma	L1	L1	L1FLnI	chr8	80795984	80805357	+	noncoding	ZNF704	protein_coding	ANTISENSE	ENSG00000164684	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr8:80802192-80802194
L1FLnI_8q21.13na	L1	L1	L1FLnI	chr8	80819467	80828680	+	noncoding	ZNF704	protein_coding	ANTISENSE	ENSG00000164684	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.13oa	L1	L1	L1FLnI	chr8	81325356	81335380	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC018616.1	ENSG00000253859	104056	FABP5	ENSG00000164687	40579	None	None
L1FLnI_8q21.13pa	L1	L1	L1FLnI	chr8	81380547	81390819	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC018616.1	ENSG00000253859	48617	FABP5	ENSG00000164687	95770	None	None
L1FLnI_8q21.13qa	L1	L1	L1FLnI	chr8	81423713	81433732	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FABP5	ENSG00000164687	138936	AC018616.1	ENSG00000253859	5704	None	None
L1FLnI_8q21.13ra	L1	L1	L1FLnI	chr8	81557901	81568339	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023644.1	ENSG00000253374	24626	IMPA1P1	ENSG00000251521	37230	None	None
L1FLnI_8q21.13sa	L1	L1	L1FLnI	chr8	81764718	81774742	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CHMP4C	ENSG00000164695	5203	AC132219.1	ENSG00000253334	17081	None	None
L1FLnI_8q21.13ta	L1	L1	L1FLnI	chr8	81984586	81994744	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC060765.2	ENSG00000254394	38789	LINC02235	ENSG00000254689	60238	None	None
L1FLnI_8q21.13ua	L1	L1	L1FLnI	chr8	82261181	82270244	-	noncoding	AC060765.2	lncRNA	ANTISENSE	ENSG00000254394	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.13va	L1	L1	L1FLnI	chr8	82447372	82456190	-	noncoding	AC060765.2	lncRNA	ANTISENSE	ENSG00000254394	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.13wa	L1	L1	L1FLnI	chr8	82814616	82824788	-	noncoding	AC060765.2	lncRNA	ANTISENSE	ENSG00000254394	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.13xa	L1	L1	L1FLnI	chr8	82932929	82943469	+	noncoding	AC060765.2,AC105031.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000254394,ENSG00000253836	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.13ya	L1	L1	L1FLnI	chr8	82932929	82941701	+	noncoding	AC060765.2,AC105031.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000254394,ENSG00000253836	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.13za	L1	L1	L1FLnI	chr8	82992718	83002979	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC105031.1	ENSG00000253581	12832	AC090095.1	ENSG00000254189	96997	None	None
L1FLnI_8q21.13ab	L1	L1	L1FLnI	chr8	83215873	83224735	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090132.2	ENSG00000274116	69190	AC090132.1	ENSG00000253423	13442	None	None
L1FLnI_8q21.13bb	L1	L1	L1FLnI	chr8	83317981	83327477	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090132.2	ENSG00000274116	23710	LINC01419	ENSG00000253898	76281	None	None
L1FLnI_8q21.13cb	L1	L1	L1FLnI	chr8	83443644	83453669	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01419	ENSG00000253898	34744	AC015522.1	ENSG00000254202	459044	None	None
L1FLnI_8q21.2a	L1	L1	L1FLnI	chr8	83598230	83608073	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01419	ENSG00000253898	189330	AC015522.1	ENSG00000254202	304640	None	None
L1FLnI_8q21.2b	L1	L1	L1FLnI	chr8	83616805	83626955	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC015522.1	ENSG00000254202	285758	LINC01419	ENSG00000253898	207905	None	None
L1FLnI_8q21.2c	L1	L1	L1FLnI	chr8	83623028	83632500	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC015522.1	ENSG00000254202	280213	LINC01419	ENSG00000253898	214128	None	None
L1FLnI_8q21.2d	L1	L1	L1FLnI	chr8	83875125	83884703	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC015522.1	ENSG00000254202	28010	LINC01419	ENSG00000253898	466225	None	None
L1FLnI_8q21.2e	L1	L1	L1FLnI	chr8	83894273	83904424	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01419	ENSG00000253898	485373	AC015522.1	ENSG00000254202	8289	None	None
L1FLnI_8q21.2f	L1	L1	L1FLnI	chr8	83903976	83912574	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC015522.1	ENSG00000254202	139	LINC01419	ENSG00000253898	495076	None	None
L1FLnI_8q21.2g	L1	L1	L1FLnI	chr8	84014372	84024365	-	coding	AC015522.1	lncRNA	ANTISENSE	ENSG00000254202	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.2h	L1	L1	L1FLnI	chr8	84070903	84079794	-	coding	AC015522.1	lncRNA	ANTISENSE	ENSG00000254202	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.2i	L1	L1	L1FLnI	chr8	84076305	84086501	-	noncoding	AC015522.1	lncRNA	ANTISENSE	ENSG00000254202	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr8:84084715-84085046	None
L1FLnI_8q21.2j	L1	L1	L1FLnI	chr8	84419047	84429073	-	coding	RALYL	protein_coding	ANTISENSE	ENSG00000184672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.2k	L1	L1	L1FLnI	chr8	84463644	84473666	-	coding	RALYL	protein_coding	ANTISENSE	ENSG00000184672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.2l	L1	L1	L1FLnI	chr8	84615072	84625123	-	coding	RALYL	protein_coding	ANTISENSE	ENSG00000184672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.2m	L1	L1	L1FLnI	chr8	84615095	84625123	-	coding	RALYL	protein_coding	ANTISENSE	ENSG00000184672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.2n	L1	L1	L1FLnI	chr8	84806566	84816947	-	noncoding	RALYL	protein_coding	ANTISENSE	ENSG00000184672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.2o	L1	L1	L1FLnI	chr8	84835487	84845633	+	coding	RALYL	protein_coding	SENSE	ENSG00000184672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.2p	L1	L1	L1FLnI	chr8	85418352	85428491	-	coding	CA3	protein_coding	ANTISENSE	ENSG00000164879	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.2q	L1	L1	L1FLnI	chr8	85867787	85877903	-	noncoding	AC100801.1	lncRNA	ANTISENSE	ENSG00000253154	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3a	L1	L1	L1FLnI	chr8	86167978	86178019	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084128.1	ENSG00000253699	2399	AC023194.3	ENSG00000253675	13753	None	None
L1FLnI_8q21.3b	L1	L1	L1FLnI	chr8	86585840	86595866	-	coding	CNGB3,MIOXP1	protein_coding,processed_pseudogene	SENSE,SENSE	ENSG00000170289,ENSG00000253292	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3c	L1	L1	L1FLnI	chr8	86954335	86963530	-	noncoding	CNBD1	protein_coding	ANTISENSE	ENSG00000176571	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3d	L1	L1	L1FLnI	chr8	87222732	87232776	-	coding	CNBD1	protein_coding	ANTISENSE	ENSG00000176571	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3e	L1	L1	L1FLnI	chr8	87222744	87232776	-	coding	CNBD1	protein_coding	ANTISENSE	ENSG00000176571	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3f	L1	L1	L1FLnI	chr8	87321305	87331329	-	coding	CNBD1	protein_coding	ANTISENSE	ENSG00000176571	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3g	L1	L1	L1FLnI	chr8	87381635	87391753	+	coding	CNBD1	protein_coding	SENSE	ENSG00000176571	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3h	L1	L1	L1FLnI	chr8	87621332	87631334	+	coding	AF121898.1	lncRNA	ANTISENSE	ENSG00000253500	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3i	L1	L1	L1FLnI	chr8	87621332	87631333	+	coding	AF121898.1	lncRNA	ANTISENSE	ENSG00000253500	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3j	L1	L1	L1FLnI	chr8	87645122	87654704	+	coding	AF121898.1	lncRNA	ANTISENSE	ENSG00000253500	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3k	L1	L1	L1FLnI	chr8	87774097	87783140	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AF121898.1	ENSG00000253500	18379	SOX5P1	ENSG00000254376	5422	None	None
L1FLnI_8q21.3l	L1	L1	L1FLnI	chr8	87789646	87799885	+	noncoding	SOX5P1	processed_pseudogene	ANTISENSE	ENSG00000254376	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3m	L1	L1	L1FLnI	chr8	88145350	88155380	+	coding	MMP16	protein_coding	ANTISENSE	ENSG00000156103	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3n	L1	L1	L1FLnI	chr8	88471491	88480861	+	noncoding	AC090578.1	lncRNA	SENSE	ENSG00000253553	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3o	L1	L1	L1FLnI	chr8	88570595	88580730	+	coding	AC090578.1	lncRNA	SENSE	ENSG00000253553	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_8q21.3	L1	L1	L1ORF2	chr8	88684705	88692751	+	coding	AC090578.1	lncRNA	SENSE	ENSG00000253553	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3p	L1	L1	L1FLnI	chr8	88854142	88864285	-	coding	AC090578.1	lncRNA	ANTISENSE	ENSG00000253553	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3q	L1	L1	L1FLnI	chr8	89021802	89030575	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP74	ENSG00000253621	212826	AC090578.1	ENSG00000253553	134229	None	None
L1FLnI_8q21.3r	L1	L1	L1FLnI	chr8	89214691	89224863	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090578.1	ENSG00000253553	327118	RPSAP74	ENSG00000253621	18538	None	None
L1FLnI_8q21.3s	L1	L1	L1FLnI	chr8	89334897	89344596	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P4	ENSG00000248231	68025	RPSAP74	ENSG00000253621	91104	None	None
L1FLnI_8q21.3t	L1	L1	L1FLnI	chr8	89370418	89380572	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP74	ENSG00000253621	126625	KRT8P4	ENSG00000248231	32049	None	None
L1FLnI_8q21.3u	L1	L1	L1FLnI	chr8	89531742	89541769	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P4	ENSG00000248231	116671	AF117829.1	ENSG00000251136	44103	None	None
L1FLnI_8q21.3v	L1	L1	L1FLnI	chr8	89551812	89561568	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AF117829.1	ENSG00000251136	24304	KRT8P4	ENSG00000248231	136741	None	None
L1FLnI_8q21.3w	L1	L1	L1FLnI	chr8	89551842	89561568	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AF117829.1	ENSG00000251136	24304	KRT8P4	ENSG00000248231	136771	None	None
L1FLnI_8q21.3x	L1	L1	L1FLnI	chr8	89669576	89678776	+	coding	AF117829.1	lncRNA	ANTISENSE	ENSG00000251136	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3y	L1	L1	L1FLnI	chr8	89674786	89685015	+	coding	AF117829.1	lncRNA	ANTISENSE	ENSG00000251136	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3z	L1	L1	L1FLnI	chr8	89675835	89685015	+	noncoding	AF117829.1	lncRNA	ANTISENSE	ENSG00000251136	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3aa	L1	L1	L1FLnI	chr8	89704698	89714843	+	coding	AF117829.1	lncRNA	ANTISENSE	ENSG00000251136	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr8:89705329-89705613	None
L1FLnI_8q21.3ba	L1	L1	L1FLnI	chr8	89733323	89741921	+	noncoding	AF117829.1	lncRNA	ANTISENSE	ENSG00000251136	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3ca	L1	L1	L1FLnI	chr8	89888685	89898869	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF117829.2	ENSG00000275103	55121	RNU6-925P	ENSG00000207359	1852	chr8:89889519-89889727	None
L1FLnI_8q21.3da	L1	L1	L1FLnI	chr8	90041767	90051684	+	coding	DECR1	protein_coding	SENSE	ENSG00000104325	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3ea	L1	L1	L1FLnI	chr8	90260608	90270752	+	coding	AC004083.1,LINC00534	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000254180,ENSG00000253394	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr8:90263085-90263087
L1FLnI_8q21.3fa	L1	L1	L1FLnI	chr8	90372322	90382089	+	coding	AC004083.1,LINC00534	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000254180,ENSG00000253394	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3ga	L1	L1	L1FLnI	chr8	90392888	90403030	-	coding	AC004083.1,LINC00534	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000254180,ENSG00000253394	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr8:90399637-90399640
L1FLnI_8q21.3ha	L1	L1	L1FLnI	chr8	90485465	90495669	-	noncoding	AC004083.1,LINC00534	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000254180,ENSG00000253394	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3ia	L1	L1	L1FLnI	chr8	90728301	90738017	-	noncoding	TMEM64	protein_coding	SENSE	ENSG00000180694	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3ja	L1	L1	L1FLnI	chr8	90743097	90752180	-	noncoding	TMEM64	protein_coding	SENSE	ENSG00000180694	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3ka	L1	L1	L1FLnI	chr8	90813297	90821905	-	noncoding	NECAB1,AC103770.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000123119,ENSG00000254251	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3la	L1	L1	L1FLnI	chr8	91191346	91201368	-	coding	LRRC69	protein_coding	ANTISENSE	ENSG00000214954	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3ma	L1	L1	L1FLnI	chr8	91264255	91273752	-	noncoding	SLC26A7	protein_coding	ANTISENSE	ENSG00000147606	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3na	L1	L1	L1FLnI	chr8	91370791	91381480	-	noncoding	SLC26A7	protein_coding	ANTISENSE	ENSG00000147606	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3oa	L1	L1	L1FLnI	chr8	91494579	91503766	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC103409.1	ENSG00000253901	39158	SLC26A7	ENSG00000147606	96424	None	None
L1FLnI_8q21.3pa	L1	L1	L1FLnI	chr8	91521593	91531621	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC103409.1	ENSG00000253901	11303	SLC26A7	ENSG00000147606	123438	None	None
L1FLI_8q21.3	L1	L1	L1FLI	chr8	91557656	91565704	+	coding	AC103409.1	lncRNA	ANTISENSE	ENSG00000253901	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3qa	L1	L1	L1FLnI	chr8	91580149	91589531	-	coding	AC103409.1	lncRNA	SENSE	ENSG00000253901	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3ra	L1	L1	L1FLnI	chr8	91784311	91794051	+	coding	AC103409.1	lncRNA	ANTISENSE	ENSG00000253901	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3sa	L1	L1	L1FLnI	chr8	91790053	91800068	+	coding	AC103409.1	lncRNA	ANTISENSE	ENSG00000253901	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3ta	L1	L1	L1FLnI	chr8	91866020	91876034	+	noncoding	AC103409.1	lncRNA	ANTISENSE	ENSG00000253901	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3ua	L1	L1	L1FLnI	chr8	91887864	91897861	+	coding	AC103409.1	lncRNA	ANTISENSE	ENSG00000253901	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q21.3va	L1	L1	L1FLnI	chr8	92215567	92225689	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022695.1	ENSG00000253118	126223	AC104339.1	ENSG00000233778	71132	None	None
L1FLnI_8q22.1a	L1	L1	L1FLnI	chr8	92307860	92317801	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC022695.1	ENSG00000253118	34111	AC104339.1	ENSG00000233778	163425	None	None
L1FLnI_8q22.1b	L1	L1	L1FLnI	chr8	92363694	92373708	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC022695.2	ENSG00000253682	29212	AC022695.1	ENSG00000253118	11546	None	None
L1FLnI_8q22.1c	L1	L1	L1FLnI	chr8	92556535	92566473	-	noncoding	AC091096.1	lncRNA	SENSE	ENSG00000253634	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.1d	L1	L1	L1FLnI	chr8	93042949	93053476	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C8orf87	ENSG00000279847	80619	MIR8084	ENSG00000277063	13110	None	None
L1FLnI_8q22.1e	L1	L1	L1FLnI	chr8	93043372	93053476	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C8orf87	ENSG00000279847	80619	MIR8084	ENSG00000277063	13533	None	None
L1FLnI_8q22.1f	L1	L1	L1FLnI	chr8	93199197	93209363	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00535	ENSG00000246662	3939	C8orf87	ENSG00000279847	32347	None	None
L1FLnI_8q22.1g	L1	L1	L1FLnI	chr8	93402314	93412338	+	coding	LINC00535	lncRNA	ANTISENSE	ENSG00000246662	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.1h	L1	L1	L1FLnI	chr8	93462827	93472213	+	coding	LINC00535	lncRNA	ANTISENSE	ENSG00000246662	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.1i	L1	L1	L1FLnI	chr8	93479764	93489889	+	coding	LINC00535	lncRNA	ANTISENSE	ENSG00000246662	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.1j	L1	L1	L1FLnI	chr8	93479764	93489897	+	coding	LINC00535	lncRNA	ANTISENSE	ENSG00000246662	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.1k	L1	L1	L1FLnI	chr8	93773864	93784007	-	coding	TMEM67	protein_coding	ANTISENSE	ENSG00000164953	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.1l	L1	L1	L1FLnI	chr8	93963329	93973469	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105081.1	ENSG00000275386	1202	RPL34P18	ENSG00000240509	5638	None	None
L1FLnI_8q22.1m	L1	L1	L1FLnI	chr8	94003124	94013266	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP003351.1	ENSG00000253585	84498	AC105081.1	ENSG00000275386	28348	None	None
L1FLnI_8q22.1n	L1	L1	L1FLnI	chr8	94120820	94130583	-	noncoding	CDH17	protein_coding	SENSE	ENSG00000079112	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.1o	L1	L1	L1FLnI	chr8	94131187	94141116	-	coding	CDH17	protein_coding	SENSE	ENSG00000079112	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.1p	L1	L1	L1FLnI	chr8	94312070	94320951	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS4XP10	ENSG00000244217	31972	GEM	ENSG00000164949	49720	None	None
L1FLnI_8q22.1q	L1	L1	L1FLnI	chr8	95551734	95561765	-	coding	C8orf37-AS1	lncRNA	ANTISENSE	ENSG00000253773	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.1r	L1	L1	L1FLnI	chr8	95587523	95597349	-	coding	C8orf37-AS1	lncRNA	ANTISENSE	ENSG00000253773	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.1s	L1	L1	L1FLnI	chr8	95813283	95822343	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012339.2	ENSG00000254079	125438	C8orf37-AS1	ENSG00000253773	2029	None	None
L1FLnI_8q22.1t	L1	L1	L1FLnI	chr8	95868843	95878745	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C8orf37-AS1	ENSG00000253773	57589	AC012339.2	ENSG00000254079	69036	None	None
L1FLnI_8q22.1u	L1	L1	L1FLnI	chr8	95868843	95878731	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C8orf37-AS1	ENSG00000253773	57589	AC012339.2	ENSG00000254079	69050	None	None
L1FLnI_8q22.1v	L1	L1	L1FLnI	chr8	95927391	95937539	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC012339.2	ENSG00000254079	10242	C8orf37-AS1	ENSG00000253773	116137	None	None
L1FLnI_8q22.1w	L1	L1	L1FLnI	chr8	96032633	96042750	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC007992.1	ENSG00000183663	25979	AC012339.1	ENSG00000248762	39530	None	None
L1FLnI_8q22.1x	L1	L1	L1FLnI	chr8	96066918	96077055	+	coding	AC007992.1	processed_pseudogene	ANTISENSE	ENSG00000183663	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.1y	L1	L1	L1FLnI	chr8	96113179	96123198	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC007992.1	ENSG00000183663	43498	AC007992.2	ENSG00000271349	3769	None	None
L1FLnI_8q22.1z	L1	L1	L1FLnI	chr8	96737961	96748003	-	coding	CPQ	protein_coding	ANTISENSE	ENSG00000104324	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.1aa	L1	L1	L1FLnI	chr8	96968556	96978481	+	noncoding	CPQ	protein_coding	SENSE	ENSG00000104324	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.1ba	L1	L1	L1FLnI	chr8	97013381	97023984	+	noncoding	CPQ	protein_coding	SENSE	ENSG00000104324	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.1ca	L1	L1	L1FLnI	chr8	97013381	97022353	+	noncoding	CPQ	protein_coding	SENSE	ENSG00000104324	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.1da	L1	L1	L1FLnI	chr8	97038990	97049133	-	coding	CPQ	protein_coding	ANTISENSE	ENSG00000104324	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.1ea	L1	L1	L1FLnI	chr8	97292105	97302129	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TSPYL5	ENSG00000180543	14177	SNORD3H	ENSG00000207215	56136	chr8:97292541-97292939	None
L1FLnI_8q22.1fa	L1	L1	L1FLnI	chr8	97292105	97302113	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TSPYL5	ENSG00000180543	14177	SNORD3H	ENSG00000207215	56152	chr8:97292541-97292939	None
L1FLnI_8q22.1ga	L1	L1	L1FLnI	chr8	97328698	97339095	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SNORD3H	ENSG00000207215	19170	TSPYL5	ENSG00000180543	50770	None	None
L1FLnI_8q22.1ha	L1	L1	L1FLnI	chr8	97401874	97411860	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002982.1	ENSG00000213750	212343	SNORD3H	ENSG00000207215	43396	None	None
L1FLnI_8q22.1ia	L1	L1	L1FLnI	chr8	97471611	97482564	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SNORD3H	ENSG00000207215	113133	AP002982.1	ENSG00000213750	141639	None	None
L1FLnI_8q22.1ja	L1	L1	L1FLnI	chr8	97481614	97491780	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP002982.1	ENSG00000213750	132423	SNORD3H	ENSG00000207215	123136	None	None
L1FLnI_8q22.1ka	L1	L1	L1FLnI	chr8	97522900	97532661	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP002982.1	ENSG00000213750	91542	SNORD3H	ENSG00000207215	164422	None	None
L1FLnI_8q22.1la	L1	L1	L1FLnI	chr8	97526390	97534984	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SNORD3H	ENSG00000207215	167912	AP002982.1	ENSG00000213750	89219	None	None
L1FLnI_8q22.1ma	L1	L1	L1FLnI	chr8	97589087	97599226	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP002982.1	ENSG00000213750	24977	SNORD3H	ENSG00000207215	230609	None	None
L1FLnI_8q22.2a	L1	L1	L1FLnI	chr8	98256777	98266793	+	coding	NIPAL2	protein_coding	ANTISENSE	ENSG00000104361	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.2b	L1	L1	L1FLnI	chr8	98499872	98510018	-	coding	STK3	protein_coding	SENSE	ENSG00000104375	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.2c	L1	L1	L1FLnI	chr8	98583599	98593622	-	coding	STK3	protein_coding	SENSE	ENSG00000104375	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.2d	L1	L1	L1FLnI	chr8	98610947	98620978	+	coding	STK3	protein_coding	ANTISENSE	ENSG00000104375	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.2e	L1	L1	L1FLnI	chr8	98610947	98621002	+	coding	STK3	protein_coding	ANTISENSE	ENSG00000104375	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.2f	L1	L1	L1FLnI	chr8	98646852	98656995	+	coding	STK3	protein_coding	ANTISENSE	ENSG00000104375	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr8:98646574-98646982	None
L1FLnI_8q22.2g	L1	L1	L1FLnI	chr8	98693867	98704018	-	coding	STK3	protein_coding	SENSE	ENSG00000104375	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.2h	L1	L1	L1FLnI	chr8	98706658	98716794	+	noncoding	STK3	protein_coding	ANTISENSE	ENSG00000104375	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.2i	L1	L1	L1FLnI	chr8	98735107	98745245	+	coding	STK3	protein_coding	ANTISENSE	ENSG00000104375	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.2j	L1	L1	L1FLnI	chr8	98869342	98877868	-	noncoding	STK3	protein_coding	SENSE	ENSG00000104375	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.2k	L1	L1	L1FLnI	chr8	99080932	99091103	-	coding	VPS13B	protein_coding	ANTISENSE	ENSG00000132549	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.2l	L1	L1	L1FLnI	chr8	99307683	99317816	-	coding	VPS13B	protein_coding	ANTISENSE	ENSG00000132549	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.2m	L1	L1	L1FLnI	chr8	99410037	99420381	-	noncoding	VPS13B	protein_coding	ANTISENSE	ENSG00000132549	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.2n	L1	L1	L1FLnI	chr8	99410068	99420381	-	noncoding	VPS13B	protein_coding	ANTISENSE	ENSG00000132549	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.2o	L1	L1	L1FLnI	chr8	99735339	99745483	+	coding	VPS13B	protein_coding	SENSE	ENSG00000132549	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.2p	L1	L1	L1FLnI	chr8	99824097	99834556	-	noncoding	VPS13B	protein_coding	ANTISENSE	ENSG00000132549	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.2q	L1	L1	L1FLnI	chr8	99963430	99973252	+	noncoding	RGS22	protein_coding	ANTISENSE	ENSG00000132554	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.2r	L1	L1	L1FLnI	chr8	99987138	99996773	+	coding	RGS22	protein_coding	ANTISENSE	ENSG00000132554	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.2s	L1	L1	L1FLnI	chr8	100104875	100114294	+	noncoding	RGS22	protein_coding	ANTISENSE	ENSG00000132554	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:100106348-100106356,chr8:100105619-100105626,chr8:100105949-100105954,chr8:100105957-100105977,chr8:100105982-100106059,chr8:100106211-100106226
L1FLnI_8q22.3a	L1	L1	L1FLnI	chr8	100848823	100858965	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU4-83P	ENSG00000222795	16963	RPS26P6	ENSG00000212994	36806	None	None
L1FLnI_8q22.3b	L1	L1	L1FLnI	chr8	101212458	101221861	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001330.4	ENSG00000271882	3900	AP001330.2	ENSG00000253942	2080	None	None
L1FLnI_8q22.3c	L1	L1	L1FLnI	chr8	101422282	101432379	+	coding	AP001208.1	lncRNA	ANTISENSE	ENSG00000254084	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.3d	L1	L1	L1FLnI	chr8	101667535	101677723	+	coding	GRHL2	protein_coding	SENSE	ENSG00000083307	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr8:101669265-101669269
L1FLnI_8q22.3e	L1	L1	L1FLnI	chr8	101667535	101677703	+	coding	GRHL2	protein_coding	SENSE	ENSG00000083307	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr8:101669265-101669269
L1FLnI_8q22.3f	L1	L1	L1FLnI	chr8	101674571	101684593	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GRHL2	ENSG00000083307	4845	NCALD	ENSG00000104490	1949	None	None
L1FLnI_8q22.3g	L1	L1	L1FLnI	chr8	101888002	101898029	+	coding	NCALD	protein_coding	ANTISENSE	ENSG00000104490	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.3h	L1	L1	L1FLnI	chr8	101996400	102006542	+	coding	NCALD	protein_coding	ANTISENSE	ENSG00000104490	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.3i	L1	L1	L1FLnI	chr8	102129257	102139404	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR5680	ENSG00000266756	3742	AP001328.1	ENSG00000254492	15146	None	None
L1FLnI_8q22.3j	L1	L1	L1FLnI	chr8	102313442	102323598	+	coding	UBR5	protein_coding	ANTISENSE	ENSG00000104517	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.3k	L1	L1	L1FLnI	chr8	102313442	102323591	+	coding	UBR5	protein_coding	ANTISENSE	ENSG00000104517	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.3l	L1	L1	L1FLnI	chr8	103545592	103554102	+	noncoding	RIMS2	protein_coding	SENSE	ENSG00000176406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.3m	L1	L1	L1FLnI	chr8	103602498	103612518	-	coding	RIMS2	protein_coding	ANTISENSE	ENSG00000176406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.3n	L1	L1	L1FLnI	chr8	103646233	103654902	-	noncoding	RIMS2	protein_coding	ANTISENSE	ENSG00000176406	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:103652504-103652511,chr8:103652639-103652674
L1FLnI_8q22.3o	L1	L1	L1FLnI	chr8	103703036	103712110	-	noncoding	RIMS2	protein_coding	ANTISENSE	ENSG00000176406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.3p	L1	L1	L1FLnI	chr8	103750669	103759853	-	noncoding	RIMS2	protein_coding	ANTISENSE	ENSG00000176406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.3q	L1	L1	L1FLnI	chr8	103782771	103792716	-	coding	RIMS2	protein_coding	ANTISENSE	ENSG00000176406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.3r	L1	L1	L1FLnI	chr8	103787385	103796084	+	noncoding	RIMS2	protein_coding	SENSE	ENSG00000176406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.3s	L1	L1	L1FLnI	chr8	103947820	103958269	+	coding	RIMS2	protein_coding	SENSE	ENSG00000176406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.3t	L1	L1	L1FLnI	chr8	104166279	104175752	-	noncoding	RIMS2	protein_coding	ANTISENSE	ENSG00000176406	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.3u	L1	L1	L1FLnI	chr8	104305098	104315227	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RIMS2	ENSG00000176406	49004	DPYS	ENSG00000147647	15097	None	None
L1FLnI_8q22.3v	L1	L1	L1FLnI	chr8	104549223	104558427	+	noncoding	LRP12	protein_coding	ANTISENSE	ENSG00000147650	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.3w	L1	L1	L1FLnI	chr8	104609214	104617798	-	noncoding	ZFPM2	protein_coding	ANTISENSE	ENSG00000169946	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.3x	L1	L1	L1FLnI	chr8	104739353	104749373	-	coding	ZFPM2	protein_coding	ANTISENSE	ENSG00000169946	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr8:104747779-104748014	None
L1FLnI_8q22.3y	L1	L1	L1FLnI	chr8	104841224	104849863	-	noncoding	ZFPM2	protein_coding	ANTISENSE	ENSG00000169946	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.3z	L1	L1	L1FLnI	chr8	104910742	104919964	-	noncoding	ZFPM2	protein_coding	ANTISENSE	ENSG00000169946	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q22.3aa	L1	L1	L1FLnI	chr8	104958564	104968330	-	noncoding	ZFPM2	protein_coding	ANTISENSE	ENSG00000169946	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.1a	L1	L1	L1FLnI	chr8	105189498	105198143	-	noncoding	ZFPM2,TMCC1P1	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000169946,ENSG00000253318	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.1b	L1	L1	L1FLnI	chr8	105788591	105798734	-	coding	ZFPM2,ZFPM2-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000169946,ENSG00000251003	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:105795605-105795608
L1FLnI_8q23.1c	L1	L1	L1FLnI	chr8	105815424	105825518	-	noncoding	ZFPM2-AS1	lncRNA	SENSE	ENSG00000251003	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.1d	L1	L1	L1FLnI	chr8	105845469	105854214	+	noncoding	ZFPM2-AS1	lncRNA	ANTISENSE	ENSG00000251003	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.1e	L1	L1	L1FLnI	chr8	106019830	106029934	+	noncoding	ZFPM2-AS1	lncRNA	ANTISENSE	ENSG00000251003	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.1f	L1	L1	L1FLnI	chr8	106061465	106071693	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZFPM2-AS1	ENSG00000251003	941	SLC16A14P1	ENSG00000213708	144070	chr8:106061559-106061944	chr8:106062172-106062176,chr8:106062183-106062193,chr8:106062229-106062230,chr8:106062223-106062227
L1FLnI_8q23.1g	L1	L1	L1FLnI	chr8	106092607	106102826	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZFPM2-AS1	ENSG00000251003	32083	SLC16A14P1	ENSG00000213708	112937	None	None
L1FLnI_8q23.1h	L1	L1	L1FLnI	chr8	106112965	106121496	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC16A14P1	ENSG00000213708	94267	ZFPM2-AS1	ENSG00000251003	52441	None	None
L1FLnI_8q23.1i	L1	L1	L1FLnI	chr8	106557226	106567624	+	noncoding	OXR1,AC090579.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000164830,ENSG00000253582	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.1j	L1	L1	L1FLnI	chr8	107237110	107247113	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP000428.1	ENSG00000287208	41172	ANGPT1	ENSG00000154188	2369	None	None
L1FLnI_8q23.1k	L1	L1	L1FLnI	chr8	107591944	107600859	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGAM1P13	ENSG00000248838	46420	AC091010.1	ENSG00000286766	85528	None	None
L1FLnI_8q23.1l	L1	L1	L1FLnI	chr8	107648322	107657881	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025508.1	ENSG00000287949	199708	PGAM1P13	ENSG00000248838	290	None	chr8:107656507-107656513
L1FLnI_8q23.1m	L1	L1	L1FLnI	chr8	107711468	107721592	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC025508.1	ENSG00000287949	135997	PGAM1P13	ENSG00000248838	63436	None	None
L1FLnI_8q23.1n	L1	L1	L1FLnI	chr8	107889382	107899407	-	coding	AC025508.1,RSPO2	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000287949,ENSG00000147655	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.1o	L1	L1	L1FLnI	chr8	108056553	108065682	+	coding	RSPO2	protein_coding	ANTISENSE	ENSG00000147655	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.1p	L1	L1	L1FLnI	chr8	108146064	108154758	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001331.1	ENSG00000230948	13950	EIF3E	ENSG00000104408	46458	None	None
L1FLnI_8q23.1q	L1	L1	L1FLnI	chr8	108163303	108172916	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP001331.1	ENSG00000230948	31189	EIF3E	ENSG00000104408	28300	None	None
L1FLnI_8q23.1r	L1	L1	L1FLnI	chr8	108499801	108509945	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC022634.1	ENSG00000253657	62698	EMC2	ENSG00000104412	10605	None	None
L1FLnI_8q23.1s	L1	L1	L1FLnI	chr8	108586263	108596718	+	coding	AC022634.2	lncRNA	SENSE	ENSG00000253949	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.1t	L1	L1	L1FLnI	chr8	108811595	108820897	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104248.1	ENSG00000253796	50231	TMEM74	ENSG00000164841	24001	None	None
L1FLnI_8q23.1u	L1	L1	L1FLnI	chr8	108850595	108859122	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM74	ENSG00000164841	63001	AC104248.1	ENSG00000253796	12006	None	None
L1FLnI_8q23.1v	L1	L1	L1FLnI	chr8	108926984	108937087	+	coding	AC104248.1	lncRNA	ANTISENSE	ENSG00000253796	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.1w	L1	L1	L1FLnI	chr8	108980130	108990517	-	noncoding	AC104248.1	lncRNA	SENSE	ENSG00000253796	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.1x	L1	L1	L1FLnI	chr8	109213908	109222970	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NUDCD1	ENSG00000120526	17949	TRHR	ENSG00000174417	94324	None	None
L1FLnI_8q23.1y	L1	L1	L1FLnI	chr8	109279341	109288291	+	noncoding	NUDCD1	protein_coding	ANTISENSE	ENSG00000120526	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.1z	L1	L1	L1FLnI	chr8	109370012	109380148	-	coding	PKHD1L1	protein_coding	ANTISENSE	ENSG00000205038	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.2a	L1	L1	L1FLnI	chr8	109719241	109728673	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SYBU	ENSG00000147642	27450	AC023245.2	ENSG00000255099	49239	None	None
L1FLnI_8q23.2b	L1	L1	L1FLnI	chr8	109758340	109769799	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023245.2	ENSG00000255099	8113	SYBU	ENSG00000147642	66549	None	None
L1FLnI_8q23.2c	L1	L1	L1FLnI	chr8	109770429	109780595	-	noncoding	AC023245.2	processed_pseudogene	ANTISENSE	ENSG00000255099	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.2d	L1	L1	L1FLnI	chr8	109855132	109865278	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC023245.2	ENSG00000255099	72844	AC023245.3	ENSG00000283555	8635	None	None
L1FLnI_8q23.2e	L1	L1	L1FLnI	chr8	110206926	110217328	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP48	ENSG00000240590	100962	AC073023.1	ENSG00000253956	117415	None	None
L1FLnI_8q23.2f	L1	L1	L1FLnI	chr8	110948666	110958145	+	coding	LINC01608	lncRNA	ANTISENSE	ENSG00000253877	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.3a	L1	L1	L1FLnI	chr8	111147091	111156676	-	noncoding	LINC01609	lncRNA	SENSE	ENSG00000253103	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr8:111150801-111151118	None
L1FLnI_8q23.3b	L1	L1	L1FLnI	chr8	111198902	111207577	+	noncoding	LINC01609	lncRNA	ANTISENSE	ENSG00000253103	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.3c	L1	L1	L1FLnI	chr8	111411043	111420159	-	noncoding	LINC02237	lncRNA	ANTISENSE	ENSG00000253434	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr8:111414423-111414642	None
L1FLnI_8q23.3d	L1	L1	L1FLnI	chr8	111689902	111698720	-	coding	LINC02237	lncRNA	ANTISENSE	ENSG00000253434	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.3e	L1	L1	L1FLnI	chr8	111981797	111992089	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02237	ENSG00000253434	224087	RNU4-37P	ENSG00000222146	156653	None	None
L1FLnI_8q23.3f	L1	L1	L1FLnI	chr8	112053290	112062770	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU4-37P	ENSG00000222146	85972	LINC02237	ENSG00000253434	295580	None	None
L1FLnI_8q23.3g	L1	L1	L1FLnI	chr8	112527214	112537679	+	coding	CSMD3	protein_coding	ANTISENSE	ENSG00000164796	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.3h	L1	L1	L1FLnI	chr8	112590507	112600530	+	coding	CSMD3	protein_coding	ANTISENSE	ENSG00000164796	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.3i	L1	L1	L1FLnI	chr8	112709445	112718592	+	noncoding	CSMD3	protein_coding	ANTISENSE	ENSG00000164796	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.3j	L1	L1	L1FLnI	chr8	112709892	112718592	+	noncoding	CSMD3	protein_coding	ANTISENSE	ENSG00000164796	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.3k	L1	L1	L1FLnI	chr8	112776889	112787240	+	noncoding	CSMD3	protein_coding	ANTISENSE	ENSG00000164796	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.3l	L1	L1	L1FLnI	chr8	112820143	112830280	-	noncoding	CSMD3	protein_coding	SENSE	ENSG00000164796	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.3m	L1	L1	L1FLnI	chr8	112820143	112828910	-	noncoding	CSMD3	protein_coding	SENSE	ENSG00000164796	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.3n	L1	L1	L1FLnI	chr8	113621312	113631746	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC103993.1	ENSG00000253207	4354	AC046174.1	ENSG00000206719	319140	None	None
L1FLnI_8q23.3o	L1	L1	L1FLnI	chr8	113905816	113914843	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC046174.1	ENSG00000206719	36043	AC103993.1	ENSG00000253207	288858	None	None
L1FLnI_8q23.3p	L1	L1	L1FLnI	chr8	113979064	113987809	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC046174.1	ENSG00000206719	28066	AC064802.1	ENSG00000254339	294258	None	None
L1FLnI_8q23.3q	L1	L1	L1FLnI	chr8	113979148	113987809	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC046174.1	ENSG00000206719	28150	AC064802.1	ENSG00000254339	294258	None	None
L1FLnI_8q23.3r	L1	L1	L1FLnI	chr8	113999781	114009807	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC064802.1	ENSG00000254339	272260	AC046174.1	ENSG00000206719	48783	None	None
L1FLnI_8q23.3s	L1	L1	L1FLnI	chr8	114126411	114134939	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC064802.1	ENSG00000254339	147128	AC046174.1	ENSG00000206719	175413	None	None
L1FLnI_8q23.3t	L1	L1	L1FLnI	chr8	114159227	114169262	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC046174.1	ENSG00000206719	208229	AC064802.1	ENSG00000254339	112805	None	None
L1FLnI_8q23.3u	L1	L1	L1FLnI	chr8	114436870	114447409	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025881.1	ENSG00000253499	117959	CARS1P2	ENSG00000253756	344244	None	None
L1FLnI_8q23.3v	L1	L1	L1FLnI	chr8	114500532	114510551	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC025881.1	ENSG00000253499	181621	CARS1P2	ENSG00000253756	281102	None	None
L1FLnI_8q23.3w	L1	L1	L1FLnI	chr8	114579880	114589871	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CARS1P2	ENSG00000253756	201782	AC025881.1	ENSG00000253499	260969	None	None
L1FLnI_8q23.3x	L1	L1	L1FLnI	chr8	114630787	114640815	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CARS1P2	ENSG00000253756	150838	AC025881.1	ENSG00000253499	311876	None	None
L1FLnI_8q23.3y	L1	L1	L1FLnI	chr8	114888299	114898117	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRPS1	ENSG00000104447	510379	CARS1P2	ENSG00000253756	96370	None	None
L1FLnI_8q23.3z	L1	L1	L1FLnI	chr8	115013020	115022510	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRPS1	ENSG00000104447	385986	CARS1P2	ENSG00000253756	221091	None	None
L1FLnI_8q23.3aa	L1	L1	L1FLnI	chr8	115749663	115759677	+	coding	TRPS1	protein_coding	ANTISENSE	ENSG00000104447	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q23.3ba	L1	L1	L1FLnI	chr8	116323015	116333388	+	coding	LINC00536	lncRNA	ANTISENSE	ENSG00000249917	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr8:116323736-116323899	None
L1FLnI_8q23.3ca	L1	L1	L1FLnI	chr8	116387231	116397373	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00536	ENSG00000249917	62169	AC105177.1	ENSG00000253672	5170	None	None
L1FLnI_8q23.3da	L1	L1	L1FLnI	chr8	116387231	116397364	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00536	ENSG00000249917	62169	AC105177.1	ENSG00000253672	5179	None	None
L1FLnI_8q23.3ea	L1	L1	L1FLnI	chr8	116406847	116416960	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105177.1	ENSG00000253672	3090	EIF3H	ENSG00000147677	225170	None	None
L1FLnI_8q24.11a	L1	L1	L1FLnI	chr8	117187939	117198074	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC30A8	ENSG00000164756	11225	AC084114.1	ENSG00000286308	67198	None	None
L1FLnI_8q24.11b	L1	L1	L1FLnI	chr8	117414859	117423799	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084114.1	ENSG00000286308	96158	MED30	ENSG00000164758	96914	None	None
L1FLnI_8q24.11c	L1	L1	L1FLnI	chr8	117483586	117493272	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC084114.1	ENSG00000286308	164885	MED30	ENSG00000164758	27441	None	None
L1FLnI_8q24.12a	L1	L1	L1FLnI	chr8	118530505	118539589	-	coding	SAMD12	protein_coding	SENSE	ENSG00000177570	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.12b	L1	L1	L1FLnI	chr8	118545039	118555188	+	coding	SAMD12	protein_coding	ANTISENSE	ENSG00000177570	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.12c	L1	L1	L1FLnI	chr8	118717225	118727353	-	coding	SAMD12-AS1	lncRNA	ANTISENSE	ENSG00000281641	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.12d	L1	L1	L1FLnI	chr8	119158900	119168910	-	coding	MAL2	protein_coding	ANTISENSE	ENSG00000147676	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.12e	L1	L1	L1FLnI	chr8	119230448	119240416	+	coding	MAL2,MAL2-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000147676,ENSG00000253972	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.12f	L1	L1	L1FLnI	chr8	119283832	119293955	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548AZ	ENSG00000276479	31216	MAL2-AS1	ENSG00000253972	36984	None	None
L1FLnI_8q24.12g	L1	L1	L1FLnI	chr8	119288622	119298687	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MAL2-AS1	ENSG00000253972	41774	MIR548AZ	ENSG00000276479	26484	None	None
L1FLnI_8q24.12h	L1	L1	L1FLnI	chr8	119303306	119313421	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAL2-AS1	ENSG00000253972	56458	MIR548AZ	ENSG00000276479	11750	None	None
L1FLnI_8q24.12i	L1	L1	L1FLnI	chr8	119455703	119465859	-	coding	AC021733.2	lncRNA	SENSE	ENSG00000253398	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr8:119464288-119464452	None
L1FLnI_8q24.12j	L1	L1	L1FLnI	chr8	119459389	119469791	+	noncoding	AC021733.2	lncRNA	ANTISENSE	ENSG00000253398	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr8:119464288-119464452	None
L1FLnI_8q24.12k	L1	L1	L1FLnI	chr8	119473366	119483386	-	coding	AC021733.3	processed_pseudogene	SENSE	ENSG00000254037	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.12l	L1	L1	L1FLnI	chr8	119517505	119527655	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC021733.3	ENSG00000254037	36730	ENPP2	ENSG00000136960	29431	None	None
L1FLnI_8q24.12m	L1	L1	L1FLnI	chr8	120095868	120105132	-	noncoding	COL14A1	protein_coding	ANTISENSE	ENSG00000187955	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.12n	L1	L1	L1FLnI	chr8	120095868	120104965	-	noncoding	COL14A1	protein_coding	ANTISENSE	ENSG00000187955	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_8q24.12	L1	L1	L1FLI	chr8	120347375	120355418	+	coding	COL14A1	protein_coding	SENSE	ENSG00000187955	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.12o	L1	L1	L1FLnI	chr8	120393368	120404152	+	noncoding	MRPL13	protein_coding	ANTISENSE	ENSG00000172172	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr8:120397414-120397972	None
L1FLnI_8q24.12p	L1	L1	L1FLnI	chr8	120643663	120653687	-	coding	SNTB1	protein_coding	SENSE	ENSG00000172164	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.12q	L1	L1	L1FLnI	chr8	120782787	120792997	+	noncoding	SNTB1	protein_coding	ANTISENSE	ENSG00000172164	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr8:120785789-120786077	None
L1FLnI_8q24.12r	L1	L1	L1FLnI	chr8	120892570	120902661	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104958.2	ENSG00000272502	79211	AC068413.1	ENSG00000253619	10404	None	None
L1FLnI_8q24.12s	L1	L1	L1FLnI	chr8	121050192	121060295	-	noncoding	AC068413.1	lncRNA	ANTISENSE	ENSG00000253619	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.12t	L1	L1	L1FLnI	chr8	121329380	121338307	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL35AP19	ENSG00000239872	41830	AC068413.1	ENSG00000253619	209626	chr8:121334817-121335194,chr8:121335535-121335620	None
L1FLnI_8q24.12u	L1	L1	L1FLnI	chr8	121414372	121424535	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL35AP19	ENSG00000239872	33907	HAS2	ENSG00000170961	187581	None	None
L1FLnI_8q24.13a	L1	L1	L1FLnI	chr8	121997772	122007735	+	noncoding	AC037486.1	lncRNA	ANTISENSE	ENSG00000254303	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.13b	L1	L1	L1FLnI	chr8	121997772	122007745	+	noncoding	AC037486.1	lncRNA	ANTISENSE	ENSG00000254303	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.13c	L1	L1	L1FLnI	chr8	122047571	122057996	+	noncoding	AC037486.1	lncRNA	ANTISENSE	ENSG00000254303	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.13d	L1	L1	L1FLnI	chr8	122240920	122250936	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC037486.1	ENSG00000254303	113736	SMILR	ENSG00000255364	163396	None	None
L1FLnI_8q24.13e	L1	L1	L1FLnI	chr8	122270925	122280161	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC037486.1	ENSG00000254303	143741	SMILR	ENSG00000255364	134171	None	None
L1FLnI_8q24.13f	L1	L1	L1FLnI	chr8	122326172	122335592	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SMILR	ENSG00000255364	78740	AC037486.1	ENSG00000254303	198988	None	None
L1FLnI_8q24.13g	L1	L1	L1FLnI	chr8	122355884	122364924	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SMILR	ENSG00000255364	49408	AC037486.1	ENSG00000254303	228700	None	chr8:122364144-122364147
L1FLnI_8q24.13h	L1	L1	L1FLnI	chr8	122961637	122971507	-	noncoding	ZHX2	protein_coding	ANTISENSE	ENSG00000178764	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.13i	L1	L1	L1FLnI	chr8	123859483	123869507	-	coding	FER1L6	protein_coding	ANTISENSE	ENSG00000214814	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.13j	L1	L1	L1FLnI	chr8	123859488	123869507	-	coding	FER1L6	protein_coding	ANTISENSE	ENSG00000214814	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.13k	L1	L1	L1FLnI	chr8	124082860	124093021	-	coding	FER1L6,FER1L6-AS2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000214814,ENSG00000253868	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.13l	L1	L1	L1FLnI	chr8	124125450	124135971	+	noncoding	FER1L6-AS2	lncRNA	ANTISENSE	ENSG00000253868	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.13m	L1	L1	L1FLnI	chr8	124239084	124249502	-	noncoding	AC090921.1	lncRNA	SENSE	ENSG00000214803	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.13n	L1	L1	L1FLnI	chr8	125195705	125205853	-	noncoding	NSMCE2	protein_coding	ANTISENSE	ENSG00000156831	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_8q24.13	L1	L1	L1FLI	chr8	125581835	125589880	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC091114.1	ENSG00000253111	40462	AC016074.2	ENSG00000286122	58447	None	None
L1FLnI_8q24.13o	L1	L1	L1FLnI	chr8	126042309	126051737	-	noncoding	LINC00861	lncRNA	SENSE	ENSG00000245164	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.13p	L1	L1	L1FLnI	chr8	126146307	126155675	+	noncoding	LINC00861	lncRNA	ANTISENSE	ENSG00000245164	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.13q	L1	L1	L1FLnI	chr8	126146313	126155675	+	noncoding	LINC00861	lncRNA	ANTISENSE	ENSG00000245164	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.13r	L1	L1	L1FLnI	chr8	126195921	126206257	+	coding	LINC00861	lncRNA	ANTISENSE	ENSG00000245164	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.13s	L1	L1	L1FLnI	chr8	126195921	126204925	+	coding	LINC00861	lncRNA	ANTISENSE	ENSG00000245164	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.21a	L1	L1	L1FLnI	chr8	126312743	126322540	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC087667.1	ENSG00000244791	2914	LINC00861	ENSG00000245164	19955	None	None
L1FLnI_8q24.21b	L1	L1	L1FLnI	chr8	126338087	126348097	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC087667.1	ENSG00000244791	8549	AC084116.2	ENSG00000253427	126092	None	None
L1FLnI_8q24.21c	L1	L1	L1FLnI	chr8	126454590	126463937	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087667.1	ENSG00000244791	125052	AC084116.2	ENSG00000253427	10252	None	chr8:126460570-126460577
L1FLnI_8q24.21d	L1	L1	L1FLnI	chr8	126736833	126746116	-	noncoding	PCAT1	lncRNA	ANTISENSE	ENSG00000253438	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr8:126739100-126739102
L1FLnI_8q24.21e	L1	L1	L1FLnI	chr8	126799119	126809146	-	coding	PCAT1,AC024382.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000253438,ENSG00000253573	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr8:126805148-126805155
L1FLnI_8q24.21f	L1	L1	L1FLnI	chr8	126980003	126989531	-	coding	PCAT1	lncRNA	ANTISENSE	ENSG00000253438	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.21g	L1	L1	L1FLnI	chr8	128340143	128350174	+	coding	AC100822.1	lncRNA	SENSE	ENSG00000286034	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_8q24.21	L1	L1	L1FLI	chr8	128451976	128460023	-	coding	LINC00824	lncRNA	SENSE	ENSG00000254275	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.21h	L1	L1	L1FLnI	chr8	128689241	128697835	-	noncoding	CCDC26	lncRNA	SENSE	ENSG00000229140	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr8:128694020-128694166	None
L1FLnI_8q24.21i	L1	L1	L1FLnI	chr8	128706943	128715990	-	noncoding	CCDC26	lncRNA	SENSE	ENSG00000229140	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.21j	L1	L1	L1FLnI	chr8	128710853	128720888	+	coding	CCDC26	lncRNA	ANTISENSE	ENSG00000229140	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.21k	L1	L1	L1FLnI	chr8	128741105	128751133	+	coding	CCDC26	lncRNA	ANTISENSE	ENSG00000229140	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.21l	L1	L1	L1FLnI	chr8	128756350	128766495	+	noncoding	CCDC26	lncRNA	ANTISENSE	ENSG00000229140	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.21m	L1	L1	L1FLnI	chr8	128797734	128807879	+	coding	CCDC26	lncRNA	ANTISENSE	ENSG00000229140	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.21n	L1	L1	L1FLnI	chr8	128890990	128901021	-	coding	CCDC26	lncRNA	SENSE	ENSG00000229140	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.21o	L1	L1	L1FLnI	chr8	129151626	129161650	-	coding	CCDC26	lncRNA	SENSE	ENSG00000229140	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.21p	L1	L1	L1FLnI	chr8	129298157	129306694	-	noncoding	CCDC26	lncRNA	SENSE	ENSG00000229140	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr8:129302802-129303091	None
L1FLnI_8q24.21q	L1	L1	L1FLnI	chr8	129320874	129330302	+	coding	CCDC26	lncRNA	ANTISENSE	ENSG00000229140	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.21r	L1	L1	L1FLnI	chr8	129320874	129330330	+	coding	CCDC26	lncRNA	ANTISENSE	ENSG00000229140	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.21s	L1	L1	L1FLnI	chr8	129514203	129524364	+	noncoding	CCDC26	lncRNA	ANTISENSE	ENSG00000229140	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr8:129515168-129515316,chr8:129515701-129516189	None
L1FLnI_8q24.21t	L1	L1	L1FLnI	chr8	129515825	129524364	+	noncoding	CCDC26	lncRNA	ANTISENSE	ENSG00000229140	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr8:129515701-129516189	None
L1FLnI_8q24.21u	L1	L1	L1FLnI	chr8	129729188	129739321	+	coding	MTRF1LP2	processed_pseudogene	SENSE	ENSG00000224110	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.21v	L1	L1	L1FLnI	chr8	129749066	129758210	+	noncoding	GSDMC	protein_coding	ANTISENSE	ENSG00000147697	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr8:129752840-129752851
L1FLnI_8q24.22a	L1	L1	L1FLnI	chr8	131111504	131120194	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087341.1	ENSG00000253407	9567	ADCY8	ENSG00000155897	70595	None	None
L1FLnI_8q24.22b	L1	L1	L1FLnI	chr8	131231117	131241285	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104257.1	ENSG00000253507	67260	AC087341.1	ENSG00000253407	86169	None	None
L1FLnI_8q24.22c	L1	L1	L1FLnI	chr8	131246863	131256978	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC087341.1	ENSG00000253407	101915	AC104257.1	ENSG00000253507	51567	None	None
L1FLnI_8q24.22d	L1	L1	L1FLnI	chr8	131551046	131560056	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104040.1	ENSG00000252158	118177	AC060788.1	ENSG00000254255	152456	None	None
L1FLnI_8q24.22e	L1	L1	L1FLnI	chr8	131631673	131641688	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104040.1	ENSG00000252158	198804	AC060788.1	ENSG00000254255	70824	None	None
L1ORF2_8q24.22	L1	L1	L1ORF2	chr8	131769901	131777944	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC060788.1	ENSG00000254255	56921	EFR3A	ENSG00000132294	126149	None	None
L1FLnI_8q24.22f	L1	L1	L1FLnI	chr8	131877201	131887393	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EFR3A	ENSG00000132294	16700	AC060788.1	ENSG00000254255	164221	None	None
L1FLnI_8q24.22g	L1	L1	L1FLnI	chr8	131957380	131966721	+	coding	EFR3A	protein_coding	SENSE	ENSG00000132294	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.22h	L1	L1	L1FLnI	chr8	132640869	132651029	+	noncoding	LRRC6	protein_coding	ANTISENSE	ENSG00000129295	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.22i	L1	L1	L1FLnI	chr8	133777549	133786266	-	noncoding	AC133634.1,AC090821.3	lncRNA,processed_pseudogene	ANTISENSE,SENSE	ENSG00000253561,ENSG00000254313	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_8q24.22	L1	L1	L1FLI	chr8	134069731	134077776	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC105180.2	ENSG00000288067	112607	AC110741.2	ENSG00000271240	106472	None	None
L1FLnI_8q24.22j	L1	L1	L1FLnI	chr8	134347747	134357390	-	noncoding	AC105180.2	lncRNA	SENSE	ENSG00000288067	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.22k	L1	L1	L1FLnI	chr8	134664125	134672832	+	coding	ZFAT	protein_coding	ANTISENSE	ENSG00000066827	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.22l	L1	L1	L1FLnI	chr8	134670478	134680602	+	coding	ZFAT,AC087045.1	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000066827,ENSG00000271048	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.22m	L1	L1	L1FLnI	chr8	135151109	135160649	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01591	ENSG00000254083	73482	RPL23AP56	ENSG00000244413	171830	None	None
L1FLnI_8q24.22n	L1	L1	L1FLnI	chr8	135255603	135265630	+	coding	LINC01591	lncRNA	SENSE	ENSG00000254083	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.22o	L1	L1	L1FLnI	chr8	135331889	135342041	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01591	ENSG00000254083	32170	AC040914.1	ENSG00000254372	113824	chr8:135333075-135333088	None
L1FLnI_8q24.23a	L1	L1	L1FLnI	chr8	135784403	135794784	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02055	ENSG00000254101	64585	RNU1-35P	ENSG00000199652	41908	None	None
L1FLnI_8q24.23b	L1	L1	L1FLnI	chr8	135846837	135857024	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02055	ENSG00000254101	2345	RNU1-35P	ENSG00000199652	104342	None	None
L1FLnI_8q24.23c	L1	L1	L1FLnI	chr8	135872364	135882390	+	coding	LINC02055	lncRNA	SENSE	ENSG00000254101	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.23d	L1	L1	L1FLnI	chr8	136055053	136064281	+	noncoding	LINC02055	lncRNA	SENSE	ENSG00000254101	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.23e	L1	L1	L1FLnI	chr8	136437576	136447605	-	coding	LINC02055	lncRNA	ANTISENSE	ENSG00000254101	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.23f	L1	L1	L1FLnI	chr8	137034463	137044621	-	coding	LINC02055	lncRNA	ANTISENSE	ENSG00000254101	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.23g	L1	L1	L1FLnI	chr8	137396524	137405835	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-144P	ENSG00000206678	291066	ZYXP1	ENSG00000274572	19069	None	None
L1FLnI_8q24.23h	L1	L1	L1FLnI	chr8	137558086	137568112	-	coding	AC105213.1	lncRNA	SENSE	ENSG00000285817	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.23i	L1	L1	L1FLnI	chr8	138042078	138052082	-	coding	AC046195.1	lncRNA	SENSE	ENSG00000253288	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.23j	L1	L1	L1FLnI	chr8	138112667	138122691	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC046195.1	ENSG00000253288	29010	FAM135B	ENSG00000147724	7332	None	None
L1FLnI_8q24.23k	L1	L1	L1FLnI	chr8	138112667	138122724	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC046195.1	ENSG00000253288	29010	FAM135B	ENSG00000147724	7299	None	None
L1FLnI_8q24.23l	L1	L1	L1FLnI	chr8	138149820	138159490	+	noncoding	FAM135B	protein_coding	ANTISENSE	ENSG00000147724	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.23m	L1	L1	L1FLnI	chr8	138700164	138710292	+	coding	COL22A1	protein_coding	ANTISENSE	ENSG00000169436	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.3a	L1	L1	L1FLnI	chr8	140175661	140184778	-	noncoding	TRAPPC9	protein_coding	SENSE	ENSG00000167632	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr8:140179671-140180016	None
L1FLnI_8q24.3b	L1	L1	L1FLnI	chr8	140378665	140388890	+	coding	TRAPPC9	protein_coding	ANTISENSE	ENSG00000167632	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.3c	L1	L1	L1FLnI	chr8	140806463	140815167	+	noncoding	PTK2	protein_coding	ANTISENSE	ENSG00000169398	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.3d	L1	L1	L1FLnI	chr8	141832657	141841236	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC104417.1	ENSG00000254183	126855	MIR1302-7	ENSG00000221768	46344	chr8:141838157-141838174,chr8:141839839-141840069	None
L1FLnI_8q24.3e	L1	L1	L1FLnI	chr8	142846462	142856574	+	noncoding	GML	protein_coding	SENSE	ENSG00000104499	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.3f	L1	L1	L1FLnI	chr8	142860155	142870268	-	noncoding	GML	protein_coding	ANTISENSE	ENSG00000104499	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_8q24.3g	L1	L1	L1FLnI	chr8	145013343	145023463	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC139103.1	ENSG00000255000	24397	ZNF252P-AS1	ENSG00000255559	7297	None	None
L1FLnI_9p24.3a	L1	L1	L1FLnI	chr9	136150	146212	+	coding	CBWD1	protein_coding	ANTISENSE	ENSG00000172785	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p24.3b	L1	L1	L1FLnI	chr9	229405	239550	-	coding	DOCK8	protein_coding	ANTISENSE	ENSG00000107099	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p24.3c	L1	L1	L1FLnI	chr9	762962	773375	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	KANK1	ENSG00000107104	16856	DMRT1	ENSG00000137090	68315	None	None
L1FLnI_9p24.3d	L1	L1	L1FLnI	chr9	1220383	1230402	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS27AP14	ENSG00000236594	55516	AL358934.1	ENSG00000233575	98262	None	None
L1FLnI_9p24.3e	L1	L1	L1FLnI	chr9	1389610	1400015	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP279	ENSG00000202383	55657	AL358053.1	ENSG00000287465	140306	None	None
L1FLnI_9p24.3f	L1	L1	L1FLnI	chr9	1554936	1565068	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358053.1	ENSG00000287465	4833	AL591644.1	ENSG00000224092	412716	chr9:1556192-1556505	None
L1FLnI_9p24.3g	L1	L1	L1FLnI	chr9	1568519	1578545	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL591644.1	ENSG00000224092	399239	AL358053.1	ENSG00000287465	18416	None	None
L1FLnI_9p24.3h	L1	L1	L1FLnI	chr9	1568529	1578545	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL591644.1	ENSG00000224092	399239	AL358053.1	ENSG00000287465	18426	None	None
L1FLnI_9p24.3i	L1	L1	L1FLnI	chr9	1582950	1593002	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL591644.1	ENSG00000224092	384782	AL358053.1	ENSG00000287465	32847	None	None
L1FLnI_9p24.3j	L1	L1	L1FLnI	chr9	1746042	1756165	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL358053.1	ENSG00000287465	195939	AL591644.1	ENSG00000224092	221619	None	None
L1FLnI_9p24.3k	L1	L1	L1FLnI	chr9	1777974	1787042	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL591644.1	ENSG00000224092	190742	AL358053.1	ENSG00000287465	227871	None	None
L1FLnI_9p24.3l	L1	L1	L1FLnI	chr9	1930601	1940304	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL591644.1	ENSG00000224092	37480	AL358053.1	ENSG00000287465	380498	None	chr9:1939593-1939599
L1FLnI_9p24.2a	L1	L1	L1FLnI	chr9	2363689	2372871	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL592P	ENSG00000264615	134448	VLDLR-AS1	ENSG00000236404	48726	None	None
L1FLnI_9p24.2b	L1	L1	L1FLnI	chr9	2397227	2406890	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VLDLR-AS1	ENSG00000236404	14707	RN7SL592P	ENSG00000264615	167986	None	None
L1FLnI_9p24.2c	L1	L1	L1FLnI	chr9	2433178	2443586	-	noncoding	VLDLR-AS1	lncRNA	SENSE	ENSG00000236404	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:2439336-2439392	None
L1FLnI_9p24.2d	L1	L1	L1FLnI	chr9	2515135	2525463	-	noncoding	VLDLR-AS1	lncRNA	SENSE	ENSG00000236404	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p24.2e	L1	L1	L1FLnI	chr9	2579906	2589520	+	noncoding	VLDLR-AS1	lncRNA	ANTISENSE	ENSG00000236404	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p24.2f	L1	L1	L1FLnI	chr9	3141445	3150576	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01231	ENSG00000236511	30766	CARM1P1	ENSG00000227835	88037	None	None
L1FLnI_9p24.2g	L1	L1	L1FLnI	chr9	3309180	3319034	+	noncoding	RFX3	protein_coding	ANTISENSE	ENSG00000080298	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p24.2h	L1	L1	L1FLnI	chr9	3556388	3566837	-	noncoding	RFX3-AS1	lncRNA	ANTISENSE	ENSG00000232104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p24.2i	L1	L1	L1FLnI	chr9	3617850	3628310	-	noncoding	RFX3-AS1	lncRNA	ANTISENSE	ENSG00000232104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p24.2j	L1	L1	L1FLnI	chr9	3617850	3627883	-	noncoding	RFX3-AS1	lncRNA	ANTISENSE	ENSG00000232104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p24.2k	L1	L1	L1FLnI	chr9	3651749	3660328	-	noncoding	RFX3-AS1	lncRNA	ANTISENSE	ENSG00000232104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p24.2l	L1	L1	L1FLnI	chr9	3709231	3720079	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RFX3-AS1	ENSG00000232104	17417	GLIS3	ENSG00000107249	104048	chr9:3719871-3720240	None
L1FLnI_9p24.2m	L1	L1	L1FLnI	chr9	4248431	4257564	-	noncoding	GLIS3	protein_coding	SENSE	ENSG00000107249	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p24.2n	L1	L1	L1FLnI	chr9	4445353	4454085	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-694P	ENSG00000200941	58797	SLC1A1	ENSG00000106688	36383	None	None
L1FLnI_9p24.2o	L1	L1	L1FLnI	chr9	4463167	4473267	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-694P	ENSG00000200941	76611	SLC1A1	ENSG00000106688	17201	None	None
L1FLnI_9p24.2p	L1	L1	L1FLnI	chr9	4527573	4537700	+	coding	SLC1A1	protein_coding	SENSE	ENSG00000106688	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:4530559-4530733	None
L1FLnI_9p24.1a	L1	L1	L1FLnI	chr9	4602301	4612311	+	coding	SPATA6L	protein_coding	ANTISENSE	ENSG00000106686	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p24.1b	L1	L1	L1FLnI	chr9	4895586	4906042	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA1P41	ENSG00000220937	38628	RCL1	ENSG00000120158	9669	None	None
L1FLnI_9p24.1c	L1	L1	L1FLnI	chr9	4914575	4924690	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA1P41	ENSG00000220937	19980	RCL1	ENSG00000120158	28658	None	None
L1FLnI_9p24.1d	L1	L1	L1FLnI	chr9	4947218	4957348	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	JAK2	ENSG00000096968	27042	HNRNPA1P41	ENSG00000220937	1316	None	None
L1FLnI_9p24.1e	L1	L1	L1FLnI	chr9	5028273	5038365	+	coding	JAK2	protein_coding	SENSE	ENSG00000096968	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p24.1f	L1	L1	L1FLnI	chr9	5097414	5107535	+	noncoding	JAK2,MTCO1P11,MTCO2P11,MTATP6P11,MTCO3P11	protein_coding,unprocessed_pseudogene,unprocessed_pseudogene,unprocessed_pseudogene,unprocessed_pseudogene	SENSE,SENSE,SENSE,SENSE,SENSE	ENSG00000096968,ENSG00000224083,ENSG00000235917,ENSG00000228097,ENSG00000237711	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr9:5098356-5098369
L1FLnI_9p24.1g	L1	L1	L1FLnI	chr9	5129935	5139239	+	noncoding	INSL6	protein_coding	ANTISENSE	ENSG00000120210	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p24.1h	L1	L1	L1FLnI	chr9	5218634	5228378	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133547.1	ENSG00000237553	25076	INSL4	ENSG00000120211	3041	None	None
L1FLnI_9p24.1i	L1	L1	L1FLnI	chr9	5289283	5299673	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	INSL4	ENSG00000120211	53979	RLN2	ENSG00000107014	191	None	None
L1FLnI_9p24.1j	L1	L1	L1FLnI	chr9	5471316	5481460	-	coding	AL162253.2	lncRNA	SENSE	ENSG00000286162	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:5478337-5478573	chr9:5478498-5478542,chr9:5478337-5478387
L1FLnI_9p24.1k	L1	L1	L1FLnI	chr9	5497966	5508013	+	coding	AL162253.2	lncRNA	ANTISENSE	ENSG00000286162	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:5499914-5500255	chr9:5500966-5500969,chr9:5499991-5499995
L1FLnI_9p24.1l	L1	L1	L1FLnI	chr9	5722064	5732170	-	coding	RIC1	protein_coding	ANTISENSE	ENSG00000107036	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr9:5722274-5722278
L1FLnI_9p24.1m	L1	L1	L1FLnI	chr9	6057917	6067280	-	coding	AL162384.1	lncRNA	ANTISENSE	ENSG00000228739	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p24.1n	L1	L1	L1FLnI	chr9	6132349	6142350	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL162384.1	ENSG00000228739	65635	GTF3AP1	ENSG00000237274	53584	chr9:6133783-6134028	None
L1FLnI_9p24.1o	L1	L1	L1FLnI	chr9	6176707	6186726	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GTF3AP1	ENSG00000237274	9208	AL162384.1	ENSG00000228739	109993	None	None
L1FLnI_9p24.1p	L1	L1	L1FLnI	chr9	6199764	6209188	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GTF3AP1	ENSG00000237274	2516	IL33	ENSG00000137033	6598	None	None
L1FLnI_9p24.1q	L1	L1	L1FLnI	chr9	6291857	6302021	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SELENOTP1	ENSG00000233846	12704	TPD52L3	ENSG00000170777	26354	None	None
L1FLnI_9p24.1r	L1	L1	L1FLnI	chr9	6332384	6342507	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TPD52L3	ENSG00000170777	484	UHRF2	ENSG00000147854	70644	None	None
L1FLnI_9p24.1s	L1	L1	L1FLnI	chr9	6372766	6382930	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TPD52L3	ENSG00000170777	40866	UHRF2	ENSG00000147854	30221	None	None
L1FLnI_9p24.1t	L1	L1	L1FLnI	chr9	7154861	7164960	-	coding	KDM4C	protein_coding	ANTISENSE	ENSG00000107077	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p24.1u	L1	L1	L1FLnI	chr9	7213649	7222636	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161443.1	ENSG00000285688	10191	AL157703.1	ENSG00000288042	81915	None	None
L1FLnI_9p24.1v	L1	L1	L1FLnI	chr9	7277187	7287333	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL157703.1	ENSG00000288042	17218	AL161443.1	ENSG00000285688	73729	None	None
L1FLnI_9p24.1w	L1	L1	L1FLnI	chr9	7623059	7633164	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP33	ENSG00000178654	24682	AL354694.1	ENSG00000273056	152941	None	None
L1FLnI_9p24.1x	L1	L1	L1FLnI	chr9	7709434	7719543	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP33	ENSG00000178654	111057	AL354694.1	ENSG00000273056	66562	None	None
L1FLnI_9p24.1y	L1	L1	L1FLnI	chr9	7876094	7886573	+	noncoding	DMAC1	protein_coding	ANTISENSE	ENSG00000137038	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p24.1z	L1	L1	L1FLnI	chr9	8001652	8011972	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTPRD	ENSG00000153707	302274	AL135923.2	ENSG00000231902	40428	None	None
L1FLnI_9p24.1aa	L1	L1	L1FLnI	chr9	8048800	8057660	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PTPRD	ENSG00000153707	256586	AL135923.2	ENSG00000231902	87576	None	None
L1FLnI_9p24.1ba	L1	L1	L1FLnI	chr9	8078968	8089115	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PTPRD	ENSG00000153707	225131	AL135923.2	ENSG00000231902	117744	None	None
L1FLnI_9p24.1ca	L1	L1	L1FLnI	chr9	8186094	8197200	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL135923.2	ENSG00000231902	224870	PTPRD	ENSG00000153707	117046	None	None
L1FLnI_9p24.1da	L1	L1	L1FLnI	chr9	8198511	8208002	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PTPRD	ENSG00000153707	106244	AL135923.2	ENSG00000231902	237287	None	None
L1FLnI_9p24.1ea	L1	L1	L1FLnI	chr9	8323609	8333817	-	noncoding	PTPRD	protein_coding	SENSE	ENSG00000153707	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p23a	L1	L1	L1FLnI	chr9	9262045	9270746	+	noncoding	PTPRD	protein_coding	ANTISENSE	ENSG00000153707	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p23b	L1	L1	L1FLnI	chr9	9422430	9432557	+	coding	PTPRD	protein_coding	ANTISENSE	ENSG00000153707	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p23c	L1	L1	L1FLnI	chr9	9422430	9432547	+	coding	PTPRD	protein_coding	ANTISENSE	ENSG00000153707	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p23d	L1	L1	L1FLnI	chr9	9927715	9937737	+	coding	PTPRD	protein_coding	ANTISENSE	ENSG00000153707	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p23e	L1	L1	L1FLnI	chr9	10296751	10306928	+	coding	PTPRD	protein_coding	ANTISENSE	ENSG00000153707	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p23f	L1	L1	L1FLnI	chr9	10669926	10679616	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL161788.1	ENSG00000227138	97741	AL135790.1	ENSG00000232035	37723	None	None
L1FLnI_9p23g	L1	L1	L1FLnI	chr9	10669926	10679342	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL161788.1	ENSG00000227138	98015	AL135790.1	ENSG00000232035	37723	None	None
L1FLnI_9p23h	L1	L1	L1FLnI	chr9	10774795	10784924	+	noncoding	AL161788.1	processed_pseudogene	SENSE	ENSG00000227138	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p23i	L1	L1	L1FLnI	chr9	11290354	11300315	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355672.1	ENSG00000286474	13082	AL451129.1	ENSG00000230365	14040	None	None
L1FLnI_9p23j	L1	L1	L1FLnI	chr9	11479260	11489593	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL592227.1	ENSG00000275130	128903	AL355672.1	ENSG00000286474	43016	None	None
L1FLnI_9p23k	L1	L1	L1FLnI	chr9	11888182	11897033	-	noncoding	AL353595.1	lncRNA	ANTISENSE	ENSG00000285784	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p23l	L1	L1	L1FLnI	chr9	11905957	11916384	-	noncoding	AL353595.1	lncRNA	ANTISENSE	ENSG00000285784	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p23m	L1	L1	L1FLnI	chr9	11905957	11915959	-	noncoding	AL353595.1	lncRNA	ANTISENSE	ENSG00000285784	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p23n	L1	L1	L1FLnI	chr9	11992352	12003370	+	noncoding	AL353595.1	lncRNA	SENSE	ENSG00000285784	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p23o	L1	L1	L1FLnI	chr9	12032145	12042455	+	noncoding	AL353595.1	lncRNA	SENSE	ENSG00000285784	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p23p	L1	L1	L1FLnI	chr9	12033303	12042455	+	noncoding	AL353595.1	lncRNA	SENSE	ENSG00000285784	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p23q	L1	L1	L1FLnI	chr9	12049069	12057571	-	noncoding	AL353595.1	lncRNA	ANTISENSE	ENSG00000285784	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p23r	L1	L1	L1FLnI	chr9	12128617	12138058	-	noncoding	AL589678.1	lncRNA	SENSE	ENSG00000224935	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p23s	L1	L1	L1FLnI	chr9	12309013	12319466	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TYRP1	ENSG00000107165	365973	RNU2-47P	ENSG00000222581	8562	None	None
L1FLnI_9p23t	L1	L1	L1FLnI	chr9	12309037	12319466	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TYRP1	ENSG00000107165	365973	RNU2-47P	ENSG00000222581	8586	None	None
L1FLnI_9p23u	L1	L1	L1FLnI	chr9	12330496	12340533	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU2-47P	ENSG00000222581	30045	TYRP1	ENSG00000107165	344906	None	None
L1FLnI_9p23v	L1	L1	L1FLnI	chr9	12655805	12665771	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU2-47P	ENSG00000222581	355354	TYRP1	ENSG00000107165	19668	None	None
L1FLnI_9p23w	L1	L1	L1FLnI	chr9	12864325	12873281	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL353711.1	ENSG00000222658	12040	LURAP1L	ENSG00000153714	41265	None	None
L1FLnI_9p23x	L1	L1	L1FLnI	chr9	13034385	13044409	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL161449.2	ENSG00000285637	59	MPDZ	ENSG00000107186	61295	chr9:13034070-13034553	None
L1FLnI_9p23y	L1	L1	L1FLnI	chr9	13300999	13310107	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL162386.1	ENSG00000223672	12699	MPDZ	ENSG00000107186	21409	None	None
L1FLnI_9p23z	L1	L1	L1FLnI	chr9	13470830	13479988	-	noncoding	AL583785.1,LINC01235	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000226197,ENSG00000270547	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p23aa	L1	L1	L1FLnI	chr9	13623302	13632880	+	noncoding	AL583785.1	lncRNA	SENSE	ENSG00000226197	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p23ba	L1	L1	L1FLnI	chr9	13691307	13702044	-	noncoding	AL583785.1	lncRNA	ANTISENSE	ENSG00000226197	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p23ca	L1	L1	L1FLnI	chr9	13880543	13889265	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL583785.1	ENSG00000226197	43972	LINC00583	ENSG00000205636	38706	None	None
L1FLnI_9p23da	L1	L1	L1FLnI	chr9	13991895	14001432	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PES1P2	ENSG00000229268	3986	AL360089.1	ENSG00000235533	24539	None	None
L1FLnI_9p22.3a	L1	L1	L1FLnI	chr9	14660497	14670515	+	coding	ZDHHC21	protein_coding	ANTISENSE	ENSG00000175893	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr9:14662236-14662275
L1FLnI_9p22.3b	L1	L1	L1FLnI	chr9	14870158	14880331	-	coding	FREM1	protein_coding	SENSE	ENSG00000164946	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.3c	L1	L1	L1FLnI	chr9	14945925	14956372	+	noncoding	CLCN3P1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000232000	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.3d	L1	L1	L1FLnI	chr9	14964827	14973643	+	noncoding	CLCN3P1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000232000	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.3e	L1	L1	L1FLnI	chr9	15022335	15031844	+	coding	CLCN3P1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000232000	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.3f	L1	L1	L1FLnI	chr9	15555187	15564529	-	coding	CCDC171	protein_coding	ANTISENSE	ENSG00000164989	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.3g	L1	L1	L1FLnI	chr9	15594651	15604777	-	coding	CCDC171	protein_coding	ANTISENSE	ENSG00000164989	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.3h	L1	L1	L1FLnI	chr9	15624539	15634687	+	noncoding	CCDC171	protein_coding	SENSE	ENSG00000164989	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.3i	L1	L1	L1FLnI	chr9	15640768	15650911	+	coding	CCDC171	protein_coding	SENSE	ENSG00000164989	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.3j	L1	L1	L1FLnI	chr9	15670849	15679939	-	noncoding	CCDC171	protein_coding	ANTISENSE	ENSG00000164989	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.3k	L1	L1	L1FLnI	chr9	15743133	15753405	+	coding	CCDC171	protein_coding	SENSE	ENSG00000164989	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.3l	L1	L1	L1FLnI	chr9	15801755	15811581	-	noncoding	CCDC171	protein_coding	ANTISENSE	ENSG00000164989	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.3m	L1	L1	L1FLnI	chr9	15813711	15823834	+	coding	CCDC171	protein_coding	SENSE	ENSG00000164989	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.3n	L1	L1	L1FLnI	chr9	15851118	15859654	-	noncoding	CCDC171	protein_coding	ANTISENSE	ENSG00000164989	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr9:15852078-15852084
L1FLnI_9p22.3o	L1	L1	L1FLnI	chr9	15899054	15909159	+	coding	CCDC171	protein_coding	SENSE	ENSG00000164989	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:15908818-15909042	None
L1FLnI_9p22.3p	L1	L1	L1FLnI	chr9	15984950	15995089	+	coding	CCDC171	protein_coding	SENSE	ENSG00000164989	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.3q	L1	L1	L1FLnI	chr9	16219585	16229970	+	noncoding	C9orf92	protein_coding	ANTISENSE	ENSG00000205549	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.3r	L1	L1	L1FLnI	chr9	16219585	16229954	+	noncoding	C9orf92	protein_coding	ANTISENSE	ENSG00000205549	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.3s	L1	L1	L1FLnI	chr9	16290590	16301087	+	noncoding	C9orf92	protein_coding	ANTISENSE	ENSG00000205549	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.2a	L1	L1	L1FLnI	chr9	17106438	17115400	-	noncoding	AL162725.2,AL162725.1	lncRNA,processed_pseudogene	ANTISENSE,SENSE	ENSG00000237153,ENSG00000237083	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr9:17110734-17110774
L1FLnI_9p22.2b	L1	L1	L1FLnI	chr9	17149318	17158093	-	coding	CNTLN	protein_coding	ANTISENSE	ENSG00000044459	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.2c	L1	L1	L1FLnI	chr9	17209565	17219701	-	coding	CNTLN	protein_coding	ANTISENSE	ENSG00000044459	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.2d	L1	L1	L1FLnI	chr9	17262546	17272681	-	coding	CNTLN	protein_coding	ANTISENSE	ENSG00000044459	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.2e	L1	L1	L1FLnI	chr9	17284505	17294534	-	coding	CNTLN	protein_coding	ANTISENSE	ENSG00000044459	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.2f	L1	L1	L1FLnI	chr9	17366507	17375078	+	noncoding	CNTLN	protein_coding	SENSE	ENSG00000044459	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.2g	L1	L1	L1FLnI	chr9	17536063	17546080	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CNTLN	ENSG00000044459	32140	SH3GL2	ENSG00000107295	32986	None	chr9:17536852-17536854
L1FLnI_9p22.2h	L1	L1	L1FLnI	chr9	17640946	17650624	-	noncoding	SH3GL2	protein_coding	ANTISENSE	ENSG00000107295	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.2i	L1	L1	L1FLnI	chr9	18301414	18311860	+	coding	ADAMTSL1	protein_coding	SENSE	ENSG00000178031	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.2j	L1	L1	L1FLnI	chr9	18410922	18419862	+	noncoding	ADAMTSL1	protein_coding	SENSE	ENSG00000178031	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.1a	L1	L1	L1FLnI	chr9	18557526	18567971	-	coding	ADAMTSL1	protein_coding	ANTISENSE	ENSG00000178031	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.1b	L1	L1	L1FLnI	chr9	18643888	18654044	-	coding	ADAMTSL1,RN7SKP258	protein_coding,misc_RNA	ANTISENSE,ANTISENSE	ENSG00000178031,ENSG00000252960	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.1c	L1	L1	L1FLnI	chr9	18707735	18717746	+	coding	ADAMTSL1	protein_coding	SENSE	ENSG00000178031	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr9:18710690-18710693
L1FLnI_9p22.1d	L1	L1	L1FLnI	chr9	18707735	18717730	+	coding	ADAMTSL1	protein_coding	SENSE	ENSG00000178031	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr9:18710690-18710693
L1FLnI_9p22.1e	L1	L1	L1FLnI	chr9	18838538	18848684	-	coding	ADAMTSL1	protein_coding	ANTISENSE	ENSG00000178031	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.1f	L1	L1	L1FLnI	chr9	18871840	18882321	-	noncoding	ADAMTSL1,SAXO1	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000178031,ENSG00000155875	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.1g	L1	L1	L1FLnI	chr9	18962103	18971707	-	noncoding	SAXO1	protein_coding	SENSE	ENSG00000155875	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.1h	L1	L1	L1FLnI	chr9	19498655	19509015	-	noncoding	SLC24A2	protein_coding	SENSE	ENSG00000155886	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_9p22.1	L1	L1	L1FLI	chr9	19535188	19543234	-	coding	SLC24A2	protein_coding	SENSE	ENSG00000155886	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.1i	L1	L1	L1FLnI	chr9	19761615	19771261	-	noncoding	SLC24A2	protein_coding	SENSE	ENSG00000155886	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.1j	L1	L1	L1FLnI	chr9	19850847	19860454	-	noncoding	AL158077.2	lncRNA	ANTISENSE	ENSG00000286685	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p22.1k	L1	L1	L1FLnI	chr9	19856020	19867125	+	noncoding	AL158077.2	lncRNA	SENSE	ENSG00000286685	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.3a	L1	L1	L1FLnI	chr9	20099216	20109358	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL591222.3	ENSG00000277711	131222	AL512635.1	ENSG00000237434	222088	None	None
L1FLnI_9p21.3b	L1	L1	L1FLnI	chr9	20167236	20175888	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591222.3	ENSG00000277711	199242	AL512635.1	ENSG00000237434	155558	None	None
L1FLnI_9p21.3c	L1	L1	L1FLnI	chr9	20229237	20239373	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL512635.1	ENSG00000237434	92073	AL591222.3	ENSG00000277711	261243	None	chr9:20236752-20236769
L1FLnI_9p21.3d	L1	L1	L1FLnI	chr9	20795321	20804675	-	coding	FOCAD	protein_coding	ANTISENSE	ENSG00000188352	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.3e	L1	L1	L1FLnI	chr9	20795337	20804675	-	coding	FOCAD	protein_coding	ANTISENSE	ENSG00000188352	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.3f	L1	L1	L1FLnI	chr9	21533199	21542448	+	coding	MIR31HG	lncRNA	ANTISENSE	ENSG00000171889	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr9:21542059-21542075
L1FLnI_9p21.3g	L1	L1	L1FLnI	chr9	21645309	21655782	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	KHSRPP1	ENSG00000229835	39394	H3P30	ENSG00000227443	6633	chr9:21653395-21653678	None
L1FLnI_9p21.3h	L1	L1	L1FLnI	chr9	21818642	21828752	-	noncoding	AL359922.1,MTAP	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000264545,ENSG00000099810	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.3i	L1	L1	L1FLnI	chr9	21836747	21845252	+	noncoding	AL359922.1,MTAP	protein_coding,protein_coding	SENSE,SENSE	ENSG00000264545,ENSG00000099810	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr9:21836467-21836869	None
L1FLnI_9p21.3j	L1	L1	L1FLnI	chr9	22089332	22098806	-	noncoding	CDKN2B-AS1	lncRNA	ANTISENSE	ENSG00000240498	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.3k	L1	L1	L1FLnI	chr9	22173603	22183645	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CDKN2B-AS1	ENSG00000240498	45500	AL157937.1	ENSG00000236921	20345	None	None
L1FLnI_9p21.3l	L1	L1	L1FLnI	chr9	22180868	22191637	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CDKN2B-AS1	ENSG00000240498	52765	AL157937.1	ENSG00000236921	12353	None	None
L1FLnI_9p21.3m	L1	L1	L1FLnI	chr9	22219840	22229985	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DMRTA1	ENSG00000176399	216839	AL157937.1	ENSG00000236921	5168	None	None
L1FLnI_9p21.3n	L1	L1	L1FLnI	chr9	22348331	22358359	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DMRTA1	ENSG00000176399	88465	AL157937.1	ENSG00000236921	133659	None	None
L1FLnI_9p21.3o	L1	L1	L1FLnI	chr9	22364117	22373144	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL157937.1	ENSG00000236921	149445	DMRTA1	ENSG00000176399	73680	None	None
L1FLnI_9p21.3p	L1	L1	L1FLnI	chr9	22502382	22512512	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01239	ENSG00000234840	133688	DMRTA1	ENSG00000176399	46642	None	chr9:22508518-22508561
L1FLnI_9p21.3q	L1	L1	L1FLnI	chr9	22734292	22743099	-	coding	LINC01239,AL391117.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000234840,ENSG00000284418	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.3r	L1	L1	L1FLnI	chr9	23017161	23027139	-	noncoding	AL391117.1	lncRNA	SENSE	ENSG00000284418	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.3s	L1	L1	L1FLnI	chr9	23017161	23026643	-	noncoding	AL391117.1	lncRNA	SENSE	ENSG00000284418	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.3t	L1	L1	L1FLnI	chr9	23101616	23111739	+	coding	AL391117.1	lncRNA	ANTISENSE	ENSG00000284418	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.3u	L1	L1	L1FLnI	chr9	23148207	23157716	-	noncoding	AL391117.1	lncRNA	SENSE	ENSG00000284418	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.3v	L1	L1	L1FLnI	chr9	23160784	23169458	+	noncoding	AL391117.1	lncRNA	ANTISENSE	ENSG00000284418	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.3w	L1	L1	L1FLnI	chr9	23392286	23400847	+	noncoding	AL391117.1	lncRNA	ANTISENSE	ENSG00000284418	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.3x	L1	L1	L1FLnI	chr9	23860112	23870555	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL365204.2	ENSG00000237414	24435	AL365204.1	ENSG00000231460	10198	None	None
L1FLnI_9p21.3y	L1	L1	L1FLnI	chr9	23982584	23992200	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL365204.3	ENSG00000277608	26140	AL513317.1	ENSG00000287139	77531	None	None
L1FLnI_9p21.3z	L1	L1	L1FLnI	chr9	23988204	23998334	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL365204.3	ENSG00000277608	31760	AL513317.1	ENSG00000287139	71397	None	None
L1FLnI_9p21.3aa	L1	L1	L1FLnI	chr9	24224172	24234170	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	IZUMO3	ENSG00000205442	308782	AL513317.1	ENSG00000287139	136121	None	None
L1FLnI_9p21.3ba	L1	L1	L1FLnI	chr9	24224178	24234170	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	IZUMO3	ENSG00000205442	308782	AL513317.1	ENSG00000287139	136127	None	None
L1FLnI_9p21.3ca	L1	L1	L1FLnI	chr9	24363753	24374334	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IZUMO3	ENSG00000205442	168618	AL513317.1	ENSG00000287139	275702	None	None
L1FLnI_9p21.3da	L1	L1	L1FLnI	chr9	24386582	24395442	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IZUMO3	ENSG00000205442	147510	AL513317.1	ENSG00000287139	298531	None	None
L1FLnI_9p21.3ea	L1	L1	L1FLnI	chr9	24574038	24584064	-	coding	AL353811.1	lncRNA	ANTISENSE	ENSG00000269957	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.3fa	L1	L1	L1FLnI	chr9	24638240	24648399	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RMRPP5	ENSG00000223088	257070	AL353811.1	ENSG00000269957	46136	None	None
L1FLnI_9p21.3ga	L1	L1	L1FLnI	chr9	24662338	24672516	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RMRPP5	ENSG00000223088	232953	AL353811.1	ENSG00000269957	70234	None	None
L1FLnI_9p21.3ha	L1	L1	L1FLnI	chr9	25019069	25029821	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP120	ENSG00000222693	58990	RMRPP5	ENSG00000223088	113334	None	None
L1FLnI_9p21.3ia	L1	L1	L1FLnI	chr9	25039473	25049601	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP120	ENSG00000222693	39210	RMRPP5	ENSG00000223088	133738	None	None
L1FLnI_9p21.3ja	L1	L1	L1FLnI	chr9	25070458	25080468	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP120	ENSG00000222693	8343	RMRPP5	ENSG00000223088	164723	None	None
L1FLnI_9p21.3ka	L1	L1	L1FLnI	chr9	25098508	25108686	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP120	ENSG00000222693	9357	AL353730.1	ENSG00000287318	470971	None	None
L1FLnI_9p21.3la	L1	L1	L1FLnI	chr9	25098508	25108568	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP120	ENSG00000222693	9357	AL353730.1	ENSG00000287318	471089	None	None
L1FLnI_9p21.2a	L1	L1	L1FLnI	chr9	25760008	25770570	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUSC1	ENSG00000198680	81568	LINC01241	ENSG00000236306	9462	None	None
L1FLnI_9p21.2b	L1	L1	L1FLnI	chr9	25944360	25955812	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353753.1	ENSG00000276759	110863	FAM71BP1	ENSG00000270683	5926	None	None
L1FLnI_9p21.2c	L1	L1	L1FLnI	chr9	25979031	25989235	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FAM71BP1	ENSG00000270683	40597	AL353753.1	ENSG00000276759	77440	None	None
L1FLnI_9p21.2d	L1	L1	L1FLnI	chr9	26071651	26082071	-	noncoding	AL353753.1	lncRNA	ANTISENSE	ENSG00000276759	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.2e	L1	L1	L1FLnI	chr9	26246272	26256295	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL353753.1	ENSG00000276759	127864	AL442639.1	ENSG00000279256	386402	None	None
L1FLnI_9p21.2f	L1	L1	L1FLnI	chr9	26273607	26284050	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353753.1	ENSG00000276759	155199	AL442639.1	ENSG00000279256	358647	None	None
L1FLnI_9p21.2g	L1	L1	L1FLnI	chr9	26536852	26546421	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353753.1	ENSG00000276759	418444	AL442639.1	ENSG00000279256	96276	None	None
L1FLnI_9p21.2h	L1	L1	L1FLnI	chr9	26692889	26701897	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL442639.1	ENSG00000279256	48294	AL451137.2	ENSG00000254261	45056	None	None
L1FLnI_9p21.2i	L1	L1	L1FLnI	chr9	26729116	26739524	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL451137.2	ENSG00000254261	7429	AL442639.1	ENSG00000279256	84521	None	None
L1FLnI_9p21.2j	L1	L1	L1FLnI	chr9	27217008	27227233	+	noncoding	TEK	protein_coding	SENSE	ENSG00000120156	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.2k	L1	L1	L1FLnI	chr9	27235872	27246020	+	coding	LINC00032	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000283945	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.2l	L1	L1	L1FLnI	chr9	27247686	27256312	+	noncoding	LINC00032	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000283945	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.2m	L1	L1	L1FLnI	chr9	27585652	27595835	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C9orf72	ENSG00000147894	11786	CTAGE12P	ENSG00000215441	12547	chr9:27586295-27586755,chr9:27590692-27590964,chr9:27591204-27591629	chr9:27586722-27586733,chr9:27591362-27591372,chr9:27591392-27591404,chr9:27591405-27591421,chr9:27591489-27591502,chr9:27591506-27591518,chr9:27590739-27590754,chr9:27591204-27591234
L1FLnI_9p21.2n	L1	L1	L1FLnI	chr9	27687021	27697048	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CTAGE12P	ENSG00000215441	76276	AL360014.1	ENSG00000260390	132228	None	None
L1FLnI_9p21.2o	L1	L1	L1FLnI	chr9	27687021	27697078	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CTAGE12P	ENSG00000215441	76276	AL360014.1	ENSG00000260390	132198	None	None
L1FLnI_9p21.2p	L1	L1	L1FLnI	chr9	27780347	27789148	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL360014.1	ENSG00000260390	40128	CTAGE12P	ENSG00000215441	169602	None	None
L1FLI_9p21.1	L1	L1	L1FLI	chr9	28110896	28118938	-	coding	LINGO2	protein_coding	SENSE	ENSG00000174482	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.1a	L1	L1	L1FLnI	chr9	28344636	28354662	+	coding	LINGO2	protein_coding	ANTISENSE	ENSG00000174482	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.1b	L1	L1	L1FLnI	chr9	28549575	28558657	+	coding	LINGO2,AL445526.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000174482,ENSG00000287551	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.1c	L1	L1	L1FLnI	chr9	28635314	28644542	-	coding	LINGO2	protein_coding	SENSE	ENSG00000174482	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.1d	L1	L1	L1FLnI	chr9	28635326	28644542	-	coding	LINGO2	protein_coding	SENSE	ENSG00000174482	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.1e	L1	L1	L1FLnI	chr9	28699782	28708466	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR876	ENSG00000215966	155160	LINGO2	ENSG00000174482	29496	None	None
L1FLnI_9p21.1f	L1	L1	L1FLnI	chr9	28986411	28996528	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR873	ENSG00000215939	97456	AL162388.2	ENSG00000287038	217794	None	None
L1FLnI_9p21.1g	L1	L1	L1FLnI	chr9	29266723	29276849	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL162388.1	ENSG00000230276	12297	AL353684.1	ENSG00000277646	40984	None	None
L1FLnI_9p21.1h	L1	L1	L1FLnI	chr9	29448412	29457236	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL353684.1	ENSG00000277646	129460	AL354676.1	ENSG00000229834	179250	None	None
L1FLnI_9p21.1i	L1	L1	L1FLnI	chr9	29605118	29614607	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353684.1	ENSG00000277646	286166	AL354676.1	ENSG00000229834	21879	None	None
L1FLnI_9p21.1j	L1	L1	L1FLnI	chr9	29884820	29895245	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ME2P1	ENSG00000230097	58109	LINC01242	ENSG00000280683	493690	None	None
L1FLnI_9p21.1k	L1	L1	L1FLnI	chr9	30103366	30113391	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ME2P1	ENSG00000230097	276655	LINC01242	ENSG00000280683	275544	None	None
L1FLnI_9p21.1l	L1	L1	L1FLnI	chr9	30535977	30545965	+	coding	LINC01242	lncRNA	ANTISENSE	ENSG00000280683	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.1m	L1	L1	L1FLnI	chr9	30784551	30794709	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	KRT18P36	ENSG00000226246	4762	KRT18P66	ENSG00000235626	9819	None	None
L1FLnI_9p21.1n	L1	L1	L1FLnI	chr9	30957368	30966443	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSPA8P17	ENSG00000228557	21642	FTLP4	ENSG00000214020	21391	None	None
L1FLnI_9p21.1o	L1	L1	L1FLnI	chr9	31000951	31011437	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSPA8P17	ENSG00000228557	10379	AL354854.1	ENSG00000223421	154181	None	None
L1FLnI_9p21.1p	L1	L1	L1FLnI	chr9	31000951	31010434	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSPA8P17	ENSG00000228557	10379	AL354854.1	ENSG00000223421	155184	None	None
L1FLnI_9p21.1q	L1	L1	L1FLnI	chr9	31055616	31065722	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL354854.1	ENSG00000223421	99896	HSPA8P17	ENSG00000228557	65044	None	None
L1FLnI_9p21.1r	L1	L1	L1FLnI	chr9	31154459	31164585	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL354854.1	ENSG00000223421	1033	HSPA8P17	ENSG00000228557	163887	None	None
L1FLnI_9p21.1s	L1	L1	L1FLnI	chr9	31224458	31234136	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC25A6P2	ENSG00000232203	19765	AL354854.1	ENSG00000223421	57478	None	None
L1FLnI_9p21.1t	L1	L1	L1FLnI	chr9	31290567	31300596	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC25A6P2	ENSG00000232203	35790	LINC01243	ENSG00000260720	71015	None	None
L1FLnI_9p21.1u	L1	L1	L1FLnI	chr9	31513738	31523322	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P23	ENSG00000235148	121254	MTCO3P30	ENSG00000229080	7123	None	None
L1FLnI_9p21.1v	L1	L1	L1FLnI	chr9	31850014	31860495	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P23	ENSG00000235148	204854	RNA5SP281	ENSG00000252313	433063	None	None
L1FLnI_9p21.1w	L1	L1	L1FLnI	chr9	31882674	31892774	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP281	ENSG00000252313	400784	HMGB3P23	ENSG00000235148	237514	None	None
L1FLnI_9p21.1x	L1	L1	L1FLnI	chr9	31931705	31941875	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP281	ENSG00000252313	351683	HMGB3P23	ENSG00000235148	286545	None	None
L1FLnI_9p21.1y	L1	L1	L1FLnI	chr9	31955402	31966830	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P23	ENSG00000235148	310242	RNA5SP281	ENSG00000252313	326728	chr9:31966422-31966698	None
L1FLnI_9p21.1z	L1	L1	L1FLnI	chr9	31986202	31996484	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P23	ENSG00000235148	341042	RNA5SP281	ENSG00000252313	297074	None	None
L1FLnI_9p21.1aa	L1	L1	L1FLnI	chr9	32095045	32104674	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P23	ENSG00000235148	449885	RNA5SP281	ENSG00000252313	188884	None	None
L1FLnI_9p21.1ba	L1	L1	L1FLnI	chr9	32124754	32133568	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P23	ENSG00000235148	479594	RNA5SP281	ENSG00000252313	159990	None	None
L1FLnI_9p21.1ca	L1	L1	L1FLnI	chr9	32145575	32155613	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P23	ENSG00000235148	500415	RNA5SP281	ENSG00000252313	137945	None	None
L1FLnI_9p21.1da	L1	L1	L1FLnI	chr9	32211330	32221479	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP281	ENSG00000252313	72079	HMGB3P23	ENSG00000235148	566170	chr9:32219221-32219433	None
L1FLnI_9p21.1ea	L1	L1	L1FLnI	chr9	32224549	32234559	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP281	ENSG00000252313	58999	HMGB3P23	ENSG00000235148	579389	None	None
L1FLnI_9p21.1fa	L1	L1	L1FLnI	chr9	32284872	32295579	-	noncoding	RNA5SP281	rRNA_pseudogene	ANTISENSE	ENSG00000252313	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.1ga	L1	L1	L1FLnI	chr9	32285439	32295579	-	noncoding	RNA5SP281	rRNA_pseudogene	ANTISENSE	ENSG00000252313	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.1ha	L1	L1	L1FLnI	chr9	32504805	32515236	+	noncoding	DDX58	protein_coding	ANTISENSE	ENSG00000107201	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.1ia	L1	L1	L1FLnI	chr9	32680644	32690764	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SNRPCP1	ENSG00000238001	4124	AL157884.1	ENSG00000230867	36305	None	None
L1FLnI_9p21.1ja	L1	L1	L1FLnI	chr9	32706881	32716888	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SNRPCP1	ENSG00000238001	30361	AL157884.1	ENSG00000230867	10181	None	None
L1FLnI_9p21.1ka	L1	L1	L1FLnI	chr9	32725518	32735547	+	coding	AL157884.1	processed_pseudogene	ANTISENSE	ENSG00000230867	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.1la	L1	L1	L1FLnI	chr9	32954314	32964456	+	noncoding	APTX	protein_coding	ANTISENSE	ENSG00000137074	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p21.1ma	L1	L1	L1FLnI	chr9	33081951	33092067	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SMU1	ENSG00000122692	5277	B4GALT1	ENSG00000086062	12015	None	None
L1FLnI_9p13.3a	L1	L1	L1FLnI	chr9	33664872	33673989	+	coding	PTENP1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000237984	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p13.3b	L1	L1	L1FLnI	chr9	34526052	34536201	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL160270.2	ENSG00000232983	10323	AL160270.1	ENSG00000230729	1811	None	None
L1FLnI_9p13.3c	L1	L1	L1FLnI	chr9	34761200	34771354	-	noncoding	AL162231.5	lncRNA	ANTISENSE	ENSG00000288583	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p13.3d	L1	L1	L1FLnI	chr9	34874751	34884885	+	noncoding	AL589645.1	lncRNA	SENSE	ENSG00000287368	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p13.3e	L1	L1	L1FLnI	chr9	34922557	34931381	-	noncoding	YWHAZP6	processed_pseudogene	SENSE	ENSG00000215199	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p13.3f	L1	L1	L1FLnI	chr9	35244853	35253378	-	coding	UNC13B	protein_coding	ANTISENSE	ENSG00000198722	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p13.1a	L1	L1	L1FLnI	chr9	38775900	38786011	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM240B	ENSG00000283329	55472	AL845311.1	ENSG00000228467	17996	None	None
L1FLnI_9p13.1b	L1	L1	L1FLnI	chr9	38874926	38883888	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL845311.1	ENSG00000228467	23010	AL953883.1	ENSG00000287838	65846	None	None
L1FLnI_9p13.1c	L1	L1	L1FLnI	chr9	38988234	38997989	-	coding	AL953883.1	lncRNA	ANTISENSE	ENSG00000287838	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p12a	L1	L1	L1FLnI	chr9	39270897	39280454	+	coding	CNTNAP3	protein_coding	ANTISENSE	ENSG00000106714	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p12b	L1	L1	L1FLnI	chr9	39422962	39431942	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	BX005214.1	ENSG00000224038	17657	ZNF658B	ENSG00000198416	11873	None	None
L1FLnI_9p12c	L1	L1	L1FLnI	chr9	39783194	39791701	-	noncoding	GLIDR	lncRNA	SENSE	ENSG00000278175	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p11.2a	L1	L1	L1FLnI	chr9	40675210	40685325	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL353626.3	ENSG00000276963	70082	IGKV1OR9-2	ENSG00000225380	33093	None	None
L1FLnI_9p11.2b	L1	L1	L1FLnI	chr9	40675220	40685325	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL353626.3	ENSG00000276963	70082	IGKV1OR9-2	ENSG00000225380	33103	None	None
L1FLnI_9p11.2c	L1	L1	L1FLnI	chr9	40912283	40922420	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL353626.2	ENSG00000276868	28520	MIR1299	ENSG00000275377	6590	None	None
L1FLnI_9p11.2d	L1	L1	L1FLnI	chr9	41001803	41010689	-	coding	FRG1HP,PGM5P2	transcribed_unprocessed_pseudogene,transcribed_unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000276291,ENSG00000277778	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p11.2e	L1	L1	L1FLnI	chr9	41146460	41156494	+	coding	FRG1HP,CBWD6	transcribed_unprocessed_pseudogene,protein_coding	SENSE,ANTISENSE	ENSG00000276291,ENSG00000215126	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p11.2f	L1	L1	L1FLnI	chr9	41257616	41267636	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL845472.2	ENSG00000279561	2280	RNA5SP530	ENSG00000277049	20059	None	None
L1FLnI_9p11.2g	L1	L1	L1FLnI	chr9	41811751	41820622	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CNTNAP3B	ENSG00000154529	69692	AL162731.1	ENSG00000275297	47576	None	None
L1FLnI_9p11.2h	L1	L1	L1FLnI	chr9	42033784	42042741	+	coding	CNTNAP3B	protein_coding	ANTISENSE	ENSG00000154529	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p11.2i	L1	L1	L1FLnI	chr9	42112724	42121481	+	noncoding	CNTNAP3B	protein_coding	ANTISENSE	ENSG00000154529	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p11.1a	L1	L1	L1FLnI	chr9	42247823	42256798	+	coding	AL445584.2	lncRNA	SENSE	ENSG00000275649	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p11.1b	L1	L1	L1FLnI	chr9	42542552	42551065	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX088651.4	ENSG00000237357	15614	RBPJP6	ENSG00000227924	43418	None	None
L1FLnI_9p11.1c	L1	L1	L1FLnI	chr9	42743589	42752100	+	noncoding	BX664718.2	transcribed_unprocessed_pseudogene	SENSE	ENSG00000287276	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9p11.1d	L1	L1	L1FLnI	chr9	42999455	43007962	+	noncoding	AL591441.1	transcribed_processed_pseudogene	SENSE	ENSG00000276128	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q12a	L1	L1	L1FLnI	chr9	60981705	60990685	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590491.2	ENSG00000276422	17509	BX005040.4	ENSG00000283541	73067	None	None
L1FLnI_9q12b	L1	L1	L1FLnI	chr9	61338576	61348136	-	coding	CNTNAP3C	protein_coding	ANTISENSE	ENSG00000283378	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q13a	L1	L1	L1FLnI	chr9	61999884	62010004	+	noncoding	FAM27C	lncRNA	SENSE	ENSG00000231527	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q13b	L1	L1	L1FLnI	chr9	62099359	62108320	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FAM27C	ENSG00000231527	2439	AL590399.4	ENSG00000231995	157999	None	None
L1FLnI_9q13c	L1	L1	L1FLnI	chr9	62550680	62559196	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX005266.2	ENSG00000226007	15956	CNTNAP3P5	ENSG00000278213	643	None	None
L1FLnI_9q13d	L1	L1	L1FLnI	chr9	62821945	62831965	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL512625.2	ENSG00000229422	5174	LINC01410	ENSG00000238113	8459	None	None
L1FLnI_9q13e	L1	L1	L1FLnI	chr9	62915753	62924265	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512625.1	ENSG00000170161	15649	CNTNAP3P1	ENSG00000273509	646	None	None
L1FLnI_9q13f	L1	L1	L1FLnI	chr9	63474611	63484723	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL591438.1	ENSG00000233555	96531	BMS1P10	ENSG00000237238	89494	None	None
L1FLnI_9q13g	L1	L1	L1FLnI	chr9	63474621	63484723	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL591438.1	ENSG00000233555	96531	BMS1P10	ENSG00000237238	89504	None	None
L1FLnI_9q13h	L1	L1	L1FLnI	chr9	63841130	63850087	+	coding	FRG1JP	unprocessed_pseudogene	ANTISENSE	ENSG00000215548	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q13i	L1	L1	L1FLnI	chr9	63976263	63986334	+	coding	AL163540.1	unprocessed_pseudogene	ANTISENSE	ENSG00000204790	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q13j	L1	L1	L1FLnI	chr9	64798762	64808876	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	BNIP3P4	ENSG00000271225	1989	IGKV1OR-2	ENSG00000156755	33227	None	None
L1FLnI_9q13k	L1	L1	L1FLnI	chr9	64798772	64808876	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	BNIP3P4	ENSG00000271225	1989	IGKV1OR-2	ENSG00000156755	33237	None	None
L1FLnI_9q21.11a	L1	L1	L1FLnI	chr9	65058495	65068514	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC125634.1	ENSG00000223602	169432	FO082814.1	ENSG00000287988	74544	None	None
L1FLnI_9q21.11b	L1	L1	L1FLnI	chr9	65302605	65312678	+	coding	CBWD4P	unprocessed_pseudogene	ANTISENSE	ENSG00000204778	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.11c	L1	L1	L1FLnI	chr9	65994729	66003236	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136317.2	ENSG00000274893	11289	AQP7P3	ENSG00000279688	99939	None	None
L1FLnI_9q21.11d	L1	L1	L1FLnI	chr9	67066073	67074708	-	noncoding	CNTNAP3P2	unprocessed_pseudogene	ANTISENSE	ENSG00000276386	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.11e	L1	L1	L1FLnI	chr9	67144724	67153672	-	coding	CNTNAP3P2	unprocessed_pseudogene	ANTISENSE	ENSG00000276386	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.11f	L1	L1	L1FLnI	chr9	67365944	67375699	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	BX005195.1	ENSG00000276204	36540	BX664730.1	ENSG00000276898	136335	None	None
L1FLnI_9q21.11g	L1	L1	L1FLnI	chr9	67480067	67489029	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX664730.1	ENSG00000276898	23005	BX005195.1	ENSG00000276204	150663	None	None
L1FLnI_9q21.11h	L1	L1	L1FLnI	chr9	67578710	67588830	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL627230.2	ENSG00000275904	108246	BX664730.1	ENSG00000276898	63317	None	None
L1FLnI_9q21.11i	L1	L1	L1FLnI	chr9	68274828	68284863	-	coding	CBWD3	protein_coding	ANTISENSE	ENSG00000196873	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.11j	L1	L1	L1FLnI	chr9	68586682	68595836	-	noncoding	TMEM252-DT	lncRNA	ANTISENSE	ENSG00000226337	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.12a	L1	L1	L1FLnI	chr9	69413232	69423290	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	APBA1	ENSG00000107282	4242	FAM189A2	ENSG00000135063	20674	None	None
L1FLnI_9q21.12b	L1	L1	L1FLnI	chr9	69434296	69444431	-	coding	APBA1	protein_coding	SENSE	ENSG00000107282	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.12c	L1	L1	L1FLnI	chr9	69473609	69483629	+	coding	APBA1,AL353693.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000107282,ENSG00000229312	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.12d	L1	L1	L1FLnI	chr9	69502553	69512584	+	coding	APBA1	protein_coding	ANTISENSE	ENSG00000107282	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr9:69502968-69502973,chr9:69503023-69503038,chr9:69503049-69503062,chr9:69503065-69503072,chr9:69503097-69503136
L1FLnI_9q21.12e	L1	L1	L1FLnI	chr9	69502553	69512570	+	coding	APBA1	protein_coding	ANTISENSE	ENSG00000107282	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr9:69502968-69502973,chr9:69503023-69503038,chr9:69503049-69503062,chr9:69503065-69503072,chr9:69503097-69503136
L1FLnI_9q21.12f	L1	L1	L1FLnI	chr9	70179375	70189505	-	coding	MAMDC2,RNU2-5P	protein_coding,snRNA	ANTISENSE,SENSE	ENSG00000165072,ENSG00000222465	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr9:70186593-70187120	chr9:70179885-70179888,chr9:70188783-70188787
L1FLnI_9q21.12g	L1	L1	L1FLnI	chr9	70198558	70208581	-	coding	MAMDC2,SMC5-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000165072,ENSG00000268364	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:70205797-70206179	None
L1FLnI_9q21.12h	L1	L1	L1FLnI	chr9	70206131	70216255	-	noncoding	MAMDC2,SMC5-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000165072,ENSG00000268364	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr9:70205797-70206179	None
L1FLnI_9q21.12i	L1	L1	L1FLnI	chr9	70230521	70240650	+	coding	SMC5-AS1	lncRNA	ANTISENSE	ENSG00000268364	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.12j	L1	L1	L1FLnI	chr9	70236813	70246971	+	coding	SMC5-AS1	lncRNA	ANTISENSE	ENSG00000268364	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.12k	L1	L1	L1FLnI	chr9	71196373	71205918	-	coding	TRPM3	protein_coding	SENSE	ENSG00000083067	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:71202585-71202857	None
L1FLnI_9q21.13a	L1	L1	L1FLnI	chr9	71403606	71413758	+	coding	TRPM3	protein_coding	ANTISENSE	ENSG00000083067	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.13b	L1	L1	L1FLnI	chr9	71489724	71499065	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TRPM3	ENSG00000083067	42820	RPL35AP21	ENSG00000229814	90536	None	None
L1FLnI_9q21.13c	L1	L1	L1FLnI	chr9	71593781	71602476	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL35AP21	ENSG00000229814	3848	CEMIP2	ENSG00000135048	80890	None	None
L1FLnI_9q21.13d	L1	L1	L1FLnI	chr9	72068697	72077257	+	noncoding	C9orf57,AL583829.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000204669,ENSG00000286823	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.13e	L1	L1	L1FLnI	chr9	72710288	72720719	-	noncoding	TMC1	protein_coding	ANTISENSE	ENSG00000165091	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.13f	L1	L1	L1FLnI	chr9	72774698	72783612	+	noncoding	TMC1	protein_coding	SENSE	ENSG00000165091	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.13g	L1	L1	L1FLnI	chr9	73063271	73073230	+	noncoding	ALDH1A1	protein_coding	ANTISENSE	ENSG00000165092	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.13h	L1	L1	L1FLnI	chr9	73063271	73072822	+	noncoding	ALDH1A1	protein_coding	ANTISENSE	ENSG00000165092	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.13i	L1	L1	L1FLnI	chr9	73182046	73190688	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANXA1	ENSG00000135046	11653	DPP3P2	ENSG00000221844	283690	chr9:73182615-73182739,chr9:73185191-73185547	None
L1FLnI_9q21.13j	L1	L1	L1FLnI	chr9	73395228	73406917	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DPP3P2	ENSG00000221844	67461	ANXA1	ENSG00000135046	224835	None	None
L1FLnI_9q21.13k	L1	L1	L1FLnI	chr9	73465372	73475086	-	coding	DPP3P2	processed_pseudogene	SENSE	ENSG00000221844	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.13l	L1	L1	L1FLnI	chr9	73779243	73789687	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP286	ENSG00000212454	28166	AL513124.1	ENSG00000223368	81209	None	None
L1FLnI_9q21.13m	L1	L1	L1FLnI	chr9	73980031	73989334	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL513124.1	ENSG00000223368	106734	AL355674.1	ENSG00000227809	382001	None	None
L1FLnI_9q21.13n	L1	L1	L1FLnI	chr9	74010799	74022437	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL513124.1	ENSG00000223368	137502	AL355674.1	ENSG00000227809	348898	None	None
L1FLnI_9q21.13o	L1	L1	L1FLnI	chr9	74209998	74220770	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355674.1	ENSG00000227809	150565	AL513124.1	ENSG00000223368	336701	None	None
L1FLnI_9q21.13p	L1	L1	L1FLnI	chr9	74420776	74430804	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL355674.1	ENSG00000227809	36198	RORB-AS1	ENSG00000224825	54747	None	None
L1FLnI_9q21.13q	L1	L1	L1FLnI	chr9	75202130	75212155	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL158073.1	ENSG00000235707	189734	RNU6-1228P	ENSG00000212316	3953	None	None
L1FLnI_9q21.13r	L1	L1	L1FLnI	chr9	75253208	75263324	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL158073.1	ENSG00000235707	138565	RNU6-1228P	ENSG00000212316	55031	None	None
L1FLnI_9q21.13s	L1	L1	L1FLnI	chr9	75302489	75313017	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158073.1	ENSG00000235707	88872	RNU6-1228P	ENSG00000212316	104312	chr9:75312773-75312785	None
L1FLnI_9q21.13t	L1	L1	L1FLnI	chr9	75321190	75330085	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158073.1	ENSG00000235707	71804	RNU6-1228P	ENSG00000212316	123013	None	None
L1FLnI_9q21.13u	L1	L1	L1FLnI	chr9	75340071	75350225	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL158073.1	ENSG00000235707	51664	RNU6-1228P	ENSG00000212316	141894	None	None
L1FLnI_9q21.13v	L1	L1	L1FLnI	chr9	75619678	75629783	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OTX2P1	ENSG00000234644	94439	AL353780.1	ENSG00000236376	31130	None	None
L1FLnI_9q21.13w	L1	L1	L1FLnI	chr9	75700602	75710747	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OTX2P1	ENSG00000234644	13475	AL353780.1	ENSG00000236376	112054	None	None
L1FLnI_9q21.13x	L1	L1	L1FLnI	chr9	75765465	75775837	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PCSK5	ENSG00000099139	114807	OTX2P1	ENSG00000234644	40890	None	None
L1FLnI_9q21.13y	L1	L1	L1FLnI	chr9	75816272	75825719	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PCSK5	ENSG00000099139	64925	OTX2P1	ENSG00000234644	91697	None	None
L1FLnI_9q21.2a	L1	L1	L1FLnI	chr9	76666540	76676575	+	coding	PRUNE2	protein_coding	ANTISENSE	ENSG00000106772	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.2b	L1	L1	L1FLnI	chr9	77477532	77487200	-	coding	GNA14,GNA14-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000156049,ENSG00000231373	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.2c	L1	L1	L1FLnI	chr9	77537875	77547385	-	noncoding	GNA14	protein_coding	SENSE	ENSG00000156049	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:77541558-77541701	None
L1FLnI_9q21.2d	L1	L1	L1FLnI	chr9	77619973	77630386	+	coding	GNA14	protein_coding	ANTISENSE	ENSG00000156049	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr9:77623214-77623216
L1FLnI_9q21.2e	L1	L1	L1FLnI	chr9	78050737	78060871	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GNAQ	ENSG00000156052	18926	AL353705.2	ENSG00000233457	89661	None	None
L1FLnI_9q21.2f	L1	L1	L1FLnI	chr9	78072090	78081625	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GNAQ	ENSG00000156052	40279	AL353705.2	ENSG00000233457	68907	None	None
L1FLnI_9q21.2g	L1	L1	L1FLnI	chr9	78197157	78206090	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353705.1	ENSG00000228781	16464	AL353705.4	ENSG00000234819	13030	None	None
L1FLnI_9q21.31a	L1	L1	L1FLnI	chr9	78994947	79004614	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT18P24	ENSG00000226234	31799	MTND2P8	ENSG00000237257	252203	None	None
L1FLnI_9q21.31b	L1	L1	L1FLnI	chr9	79097353	79107379	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL512634.1	ENSG00000260995	27995	KRT18P24	ENSG00000226234	59785	None	None
L1FLnI_9q21.31c	L1	L1	L1FLnI	chr9	79176780	79186783	-	coding	AL512634.1	lncRNA	SENSE	ENSG00000260995	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.31d	L1	L1	L1FLnI	chr9	79435474	79445477	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CHCHD2P9	ENSG00000186940	43715	LNCARSR	ENSG00000233086	60327	None	None
L1FLnI_9q21.31e	L1	L1	L1FLnI	chr9	79494049	79504080	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LNCARSR	ENSG00000233086	1724	CHCHD2P9	ENSG00000186940	102290	None	None
L1FLnI_9q21.31f	L1	L1	L1FLnI	chr9	79541031	79550234	+	coding	LNCARSR	lncRNA	ANTISENSE	ENSG00000233086	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.31g	L1	L1	L1FLnI	chr9	79836538	79846005	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161912.3	ENSG00000270691	4866	TLE4	ENSG00000106829	109656	None	None
L1FLnI_9q21.31h	L1	L1	L1FLnI	chr9	80048183	80057096	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01507	ENSG00000230945	13628	NPAP1P4	ENSG00000236521	299933	None	None
L1FLnI_9q21.31i	L1	L1	L1FLnI	chr9	80113848	80122836	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01507	ENSG00000230945	79293	NPAP1P4	ENSG00000236521	234193	None	None
L1FLnI_9q21.31j	L1	L1	L1FLnI	chr9	80225080	80233758	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPAP1P4	ENSG00000236521	123271	LINC01507	ENSG00000230945	190525	None	chr9:80232086-80232106,chr9:80232128-80232138
L1FLnI_9q21.31k	L1	L1	L1FLnI	chr9	80254509	80264625	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01507	ENSG00000230945	219954	NPAP1P4	ENSG00000236521	92404	None	None
L1FLnI_9q21.31l	L1	L1	L1FLnI	chr9	80414958	80423615	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO1P51	ENSG00000232981	139956	NPAP1P4	ENSG00000236521	54620	None	None
L1FLnI_9q21.31m	L1	L1	L1FLnI	chr9	80512940	80522156	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO1P51	ENSG00000232981	41415	NPAP1P4	ENSG00000236521	152602	None	None
L1FLnI_9q21.31n	L1	L1	L1FLnI	chr9	80512940	80522087	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO1P51	ENSG00000232981	41484	NPAP1P4	ENSG00000236521	152602	None	None
L1FLnI_9q21.31o	L1	L1	L1FLnI	chr9	80653618	80663635	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS19P6	ENSG00000234637	118703	MTND2P9	ENSG00000225901	87656	None	None
L1FLnI_9q21.31p	L1	L1	L1FLnI	chr9	80741164	80751189	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS19P6	ENSG00000234637	31149	MTND2P9	ENSG00000225901	175202	None	None
L1FLnI_9q21.31q	L1	L1	L1FLnI	chr9	81063937	81073992	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS20P25	ENSG00000228375	336287	AL138749.1	ENSG00000226798	192642	None	None
L1FLnI_9q21.31r	L1	L1	L1FLnI	chr9	81158798	81169096	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138749.1	ENSG00000226798	287503	RPS20P25	ENSG00000228375	241183	None	None
L1FLnI_9q21.31s	L1	L1	L1FLnI	chr9	81213657	81223797	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL138749.1	ENSG00000226798	342362	RPS20P25	ENSG00000228375	186482	None	None
L1FLnI_9q21.31t	L1	L1	L1FLnI	chr9	81229630	81238839	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS20P25	ENSG00000228375	171440	AL138749.1	ENSG00000226798	358335	None	None
L1FLnI_9q21.31u	L1	L1	L1FLnI	chr9	81286285	81296818	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS20P25	ENSG00000228375	113461	AL138749.1	ENSG00000226798	414990	None	None
L1FLnI_9q21.31v	L1	L1	L1FLnI	chr9	81428798	81438937	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS20P25	ENSG00000228375	18168	AL161727.1	ENSG00000237072	49371	chr9:81431662-81432058	None
L1FLnI_9q21.32a	L1	L1	L1FLnI	chr9	82212097	82222579	+	coding	AL162726.3	transcribed_unprocessed_pseudogene	SENSE	ENSG00000228430	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.32b	L1	L1	L1FLnI	chr9	82236653	82246965	-	noncoding	AL162726.3	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000228430	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.32c	L1	L1	L1FLnI	chr9	82238037	82246965	-	coding	AL162726.3	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000228430	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.32d	L1	L1	L1FLnI	chr9	82373074	82381602	+	noncoding	AL162726.3	transcribed_unprocessed_pseudogene	SENSE	ENSG00000228430	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.32e	L1	L1	L1FLnI	chr9	82385680	82395172	-	coding	AL162726.3	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000228430	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.32f	L1	L1	L1FLnI	chr9	82751312	82761366	-	coding	AL162726.3	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000228430	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.32g	L1	L1	L1FLnI	chr9	82751344	82761366	-	coding	AL162726.3	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000228430	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.32h	L1	L1	L1FLnI	chr9	82768873	82778874	-	coding	AL162726.3	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000228430	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.32i	L1	L1	L1FLnI	chr9	83049041	83059071	-	coding	RASEF	protein_coding	SENSE	ENSG00000165105	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.32j	L1	L1	L1FLnI	chr9	83222407	83232449	-	coding	AL137847.1	lncRNA	ANTISENSE	ENSG00000229109	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.32k	L1	L1	L1FLnI	chr9	83222435	83232449	-	coding	AL137847.1	lncRNA	ANTISENSE	ENSG00000229109	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.32l	L1	L1	L1FLnI	chr9	83510170	83520654	+	coding	FRMD3	protein_coding	ANTISENSE	ENSG00000172159	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.32m	L1	L1	L1FLnI	chr9	83548457	83559650	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU4-15P	ENSG00000199483	36794	FRMD3	ENSG00000172159	9911	None	None
L1FLnI_9q21.32n	L1	L1	L1FLnI	chr9	83550226	83559650	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU4-15P	ENSG00000199483	36794	FRMD3	ENSG00000172159	11680	None	None
L1FLnI_9q21.32o	L1	L1	L1FLnI	chr9	84111596	84121544	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC28A3	ENSG00000197506	153913	AL390838.1	ENSG00000227463	12612	None	None
L1FLnI_9q21.33a	L1	L1	L1FLnI	chr9	84529624	84538313	-	noncoding	AL157886.1	lncRNA	ANTISENSE	ENSG00000285987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.33b	L1	L1	L1FLnI	chr9	85071167	85081178	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2V1P10	ENSG00000226590	78504	NTRK2	ENSG00000148053	44097	None	None
L1FLnI_9q21.33c	L1	L1	L1FLnI	chr9	85251670	85262110	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL583827.1	ENSG00000285634	107481	AL354897.2	ENSG00000287930	17704	None	None
L1FLnI_9q21.33d	L1	L1	L1FLnI	chr9	85251672	85262110	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL583827.1	ENSG00000285634	107481	AL354897.2	ENSG00000287930	17706	None	None
L1FLnI_9q21.33e	L1	L1	L1FLnI	chr9	85321066	85330671	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL354897.2	ENSG00000287930	87100	AL583827.1	ENSG00000285634	38920	None	None
L1FLnI_9q21.33f	L1	L1	L1FLnI	chr9	85429595	85440059	+	noncoding	AL583827.1	lncRNA	ANTISENSE	ENSG00000285634	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:85430690-85431307	chr9:85431090-85431096,chr9:85440019-85440041
L1FLnI_9q21.33g	L1	L1	L1FLnI	chr9	85445844	85456378	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STK33P1	ENSG00000227412	36201	AL583827.1	ENSG00000285634	1614	None	None
L1FLnI_9q21.33h	L1	L1	L1FLnI	chr9	85447649	85456378	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STK33P1	ENSG00000227412	36201	AL583827.1	ENSG00000285634	3419	None	None
L1FLnI_9q21.33i	L1	L1	L1FLnI	chr9	85717181	85727318	-	noncoding	AGTPBP1	protein_coding	SENSE	ENSG00000135049	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.33j	L1	L1	L1FLnI	chr9	86153590	86163607	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161447.1	ENSG00000233713	20739	C9orf153	ENSG00000187753	56658	None	None
L1FLnI_9q21.33k	L1	L1	L1FLnI	chr9	86153590	86163622	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161447.1	ENSG00000233713	20739	C9orf153	ENSG00000187753	56643	None	None
L1FLnI_9q21.33l	L1	L1	L1FLnI	chr9	86376960	86387126	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL158828.1	ENSG00000235819	27075	AL353678.1	ENSG00000214908	1254	None	None
L1FLnI_9q21.33m	L1	L1	L1FLnI	chr9	86386473	86396629	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353678.1	ENSG00000214908	10767	AL158828.1	ENSG00000235819	17572	None	None
L1FLnI_9q21.33n	L1	L1	L1FLnI	chr9	86605555	86615554	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL353613.1	ENSG00000232211	16593	AL158828.1	ENSG00000235819	116948	None	None
L1FLnI_9q21.33o	L1	L1	L1FLnI	chr9	87038384	87048400	+	coding	AL513318.2	lncRNA	ANTISENSE	ENSG00000269994	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q21.33p	L1	L1	L1FLnI	chr9	87355038	87365819	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136367.1	ENSG00000212421	94453	AL353752.1	ENSG00000228373	57815	None	None
L1FLnI_9q21.33q	L1	L1	L1FLnI	chr9	87688840	87698516	-	noncoding	DAPK1	protein_coding	ANTISENSE	ENSG00000196730	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr9:87692991-87692995
L1FLnI_9q22.1a	L1	L1	L1FLnI	chr9	87898640	87908749	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SPATA31E1	ENSG00000177992	9737	SPATA31C1	ENSG00000230246	5744	None	None
L1FLnI_9q22.1b	L1	L1	L1FLnI	chr9	88593823	88604141	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NXNL2	ENSG00000130045	9549	LINC02843	ENSG00000228189	22922	None	None
L1FLnI_9q22.1c	L1	L1	L1FLnI	chr9	88853100	88862549	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390791.1	ENSG00000286414	49384	PCNPP2	ENSG00000225856	108338	None	chr9:88853109-88853132
L1FLnI_9q22.1d	L1	L1	L1FLnI	chr9	89124836	89134417	+	coding	SHC3	protein_coding	ANTISENSE	ENSG00000148082	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_9q22.2	L1	L1	L1FLI	chr9	90148603	90156653	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL161629.2	ENSG00000278382	40085	AL353649.1	ENSG00000279503	1375	None	None
L1FLnI_9q22.2a	L1	L1	L1FLnI	chr9	90188691	90198587	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL353649.1	ENSG00000279503	30045	OR7E31P	ENSG00000185074	17452	None	None
L1FLnI_9q22.2b	L1	L1	L1FLnI	chr9	90329423	90338694	+	noncoding	LINC01508	lncRNA	ANTISENSE	ENSG00000231107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q22.2c	L1	L1	L1FLnI	chr9	90329663	90338694	+	noncoding	LINC01508	lncRNA	ANTISENSE	ENSG00000231107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q22.2d	L1	L1	L1FLnI	chr9	90682774	90692256	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	DIRAS2	ENSG00000165023	39912	OR7E109P	ENSG00000236316	50270	None	None
L1FLnI_9q22.31a	L1	L1	L1FLnI	chr9	91225053	91235068	-	coding	AUH	protein_coding	SENSE	ENSG00000148090	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q22.31b	L1	L1	L1FLnI	chr9	91436879	91445872	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ROR2	ENSG00000169071	117219	AL353764.1	ENSG00000233081	9735	None	None
L1FLnI_9q22.31c	L1	L1	L1FLnI	chr9	92081744	92091898	-	coding	SPTLC1	protein_coding	SENSE	ENSG00000090054	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q22.31d	L1	L1	L1FLnI	chr9	92210910	92220928	+	coding	IARS1	protein_coding	ANTISENSE	ENSG00000196305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q22.31e	L1	L1	L1FLnI	chr9	92210910	92220912	+	coding	IARS1	protein_coding	ANTISENSE	ENSG00000196305	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q22.31f	L1	L1	L1FLnI	chr9	92567571	92577714	-	coding	CENPP	protein_coding	ANTISENSE	ENSG00000188312	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q22.31g	L1	L1	L1FLnI	chr9	92899601	92909566	-	coding	AL136981.1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000226668	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q22.31h	L1	L1	L1FLnI	chr9	92992968	93003088	-	coding	FGD3	protein_coding	ANTISENSE	ENSG00000127084	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q22.31i	L1	L1	L1FLnI	chr9	93781780	93793410	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL442224.1	ENSG00000231990	14937	PHF2	ENSG00000197724	102193	None	None
L1FLnI_9q22.32a	L1	L1	L1FLnI	chr9	94019843	94029995	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PTPDC1	ENSG00000158079	799	BARX1-DT	ENSG00000235601	60703	None	None
L1FLnI_9q22.32b	L1	L1	L1FLnI	chr9	94044348	94054860	-	coding	PTPDC1	protein_coding	ANTISENSE	ENSG00000158079	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q22.32c	L1	L1	L1FLnI	chr9	94088584	94098603	-	coding	PTPDC1	protein_coding	ANTISENSE	ENSG00000158079	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q22.32d	L1	L1	L1FLnI	chr9	94113037	94123065	-	coding	AL360020.1	lncRNA	SENSE	ENSG00000286834	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q22.32e	L1	L1	L1FLnI	chr9	94213245	94223382	+	noncoding	LINC02603	lncRNA	ANTISENSE	ENSG00000230262	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q22.32f	L1	L1	L1FLnI	chr9	95250782	95261202	+	noncoding	FANCC	protein_coding	ANTISENSE	ENSG00000158169	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q22.32g	L1	L1	L1FLnI	chr9	95395825	95405683	+	noncoding	FANCC	protein_coding	ANTISENSE	ENSG00000158169	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr9:95398403-95398404
L1FLI_9q22.32	L1	L1	L1FLI	chr9	95696579	95704618	+	coding	AL354861.2	lncRNA	SENSE	ENSG00000228142	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q22.33a	L1	L1	L1FLnI	chr9	96789168	96798684	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF782	ENSG00000196597	17585	ZNF510	ENSG00000081386	11039	None	None
L1FLnI_9q22.33b	L1	L1	L1FLnI	chr9	96793507	96803685	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF510	ENSG00000081386	15378	ZNF782	ENSG00000196597	12584	None	None
L1FLnI_9q22.33c	L1	L1	L1FLnI	chr9	97201645	97211805	+	coding	ANKRD18CP,AL590705.1	unprocessed_pseudogene,lncRNA	ANTISENSE,ANTISENSE	ENSG00000159712,ENSG00000203279	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q22.33d	L1	L1	L1FLnI	chr9	97334685	97343869	-	noncoding	STRA6LP,CCDC180	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000255036,ENSG00000197816	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q22.33e	L1	L1	L1FLnI	chr9	97580495	97590531	-	coding	TMOD1	protein_coding	ANTISENSE	ENSG00000136842	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q22.33f	L1	L1	L1FLnI	chr9	97944863	97955018	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANP32B	ENSG00000136938	28323	HEMGN	ENSG00000136929	7	None	chr9:97944867-97944874
L1FLnI_9q22.33g	L1	L1	L1FLnI	chr9	97944866	97955018	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANP32B	ENSG00000136938	28323	HEMGN	ENSG00000136929	10	None	chr9:97944867-97944874
L1FLnI_9q22.33h	L1	L1	L1FLnI	chr9	98504779	98514915	+	coding	GABBR2	protein_coding	ANTISENSE	ENSG00000136928	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q22.33i	L1	L1	L1FLnI	chr9	98504779	98514899	+	coding	GABBR2	protein_coding	ANTISENSE	ENSG00000136928	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q22.33j	L1	L1	L1FLnI	chr9	99495243	99505259	+	coding	AL359710.1,STX17-AS1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000237461,ENSG00000255145	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q22.33k	L1	L1	L1FLnI	chr9	99545438	99555032	-	noncoding	AL359710.1,STX17-AS1,AL162394.1	lncRNA,lncRNA,lncRNA	SENSE,SENSE,ANTISENSE	ENSG00000237461,ENSG00000255145,ENSG00000234860	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q31.1a	L1	L1	L1FLnI	chr9	99985063	99995165	+	noncoding	ERP44	protein_coding	ANTISENSE	ENSG00000023318	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q31.1b	L1	L1	L1FLnI	chr9	100173538	100183786	+	noncoding	INVS,NANOGP5	protein_coding,transcribed_processed_pseudogene	SENSE,SENSE	ENSG00000119509,ENSG00000231697	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q31.1c	L1	L1	L1FLnI	chr9	100230861	100241310	-	noncoding	INVS	protein_coding	ANTISENSE	ENSG00000119509	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q31.1d	L1	L1	L1FLnI	chr9	100252917	100263050	-	coding	INVS	protein_coding	ANTISENSE	ENSG00000119509	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q31.1e	L1	L1	L1FLnI	chr9	100523730	100533751	+	coding	MSANTD3-TMEFF1,TMEFF1	protein_coding,protein_coding	SENSE,SENSE	ENSG00000251349,ENSG00000241697	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q31.1f	L1	L1	L1FLnI	chr9	100687215	100697240	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CAVIN4	ENSG00000170681	98826	ACTG1P19	ENSG00000237999	34000	None	None
L1FLnI_9q31.1g	L1	L1	L1FLnI	chr9	100703990	100714074	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ACTG1P19	ENSG00000237999	17166	CAVIN4	ENSG00000170681	115601	None	None
L1FLnI_9q31.1h	L1	L1	L1FLnI	chr9	100733981	100744089	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL162395.1	ENSG00000230161	168231	ACTG1P19	ENSG00000237999	1626	None	None
L1FLnI_9q31.1i	L1	L1	L1FLnI	chr9	101101646	101111674	-	coding	PLPPR1	protein_coding	ANTISENSE	ENSG00000148123	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q31.1j	L1	L1	L1FLnI	chr9	101287302	101297456	+	coding	PLPPR1	protein_coding	SENSE	ENSG00000148123	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:101288556-101288740	None
L1FLnI_9q31.1k	L1	L1	L1FLnI	chr9	101518960	101527678	-	noncoding	PGAP4	protein_coding	SENSE	ENSG00000165152	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q31.1l	L1	L1	L1FLnI	chr9	101934916	101945055	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ARL2BPP7	ENSG00000230418	110197	MTND3P4	ENSG00000230302	141160	None	None
L1FLnI_9q31.1m	L1	L1	L1FLnI	chr9	102021655	102031565	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARL2BPP7	ENSG00000230418	23687	MTND3P4	ENSG00000230302	227899	None	None
L1FLnI_9q31.1n	L1	L1	L1FLnI	chr9	102061054	102070815	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-329P	ENSG00000238882	185789	ARL2BPP7	ENSG00000230418	5313	None	None
L1FLnI_9q31.1o	L1	L1	L1FLnI	chr9	102147246	102157264	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-329P	ENSG00000238882	99340	ARL2BPP7	ENSG00000230418	91505	None	None
L1FLnI_9q31.1p	L1	L1	L1FLnI	chr9	102217411	102227424	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-329P	ENSG00000238882	29180	ARL2BPP7	ENSG00000230418	161670	None	None
L1FLnI_9q31.1q	L1	L1	L1FLnI	chr9	102305236	102313927	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL442644.2	ENSG00000286243	130659	RNU6-329P	ENSG00000238882	48526	None	None
L1FLnI_9q31.1r	L1	L1	L1FLnI	chr9	102333704	102343854	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-329P	ENSG00000238882	76994	AL442644.2	ENSG00000286243	100732	None	None
L1FLnI_9q31.1s	L1	L1	L1FLnI	chr9	102443847	102453175	+	noncoding	AL442644.2	processed_pseudogene	ANTISENSE	ENSG00000286243	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q31.1t	L1	L1	L1FLnI	chr9	102594381	102604467	-	noncoding	LINC00587	lncRNA	ANTISENSE	ENSG00000204250	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q31.1u	L1	L1	L1FLnI	chr9	102626229	102635921	-	noncoding	LINC00587	lncRNA	ANTISENSE	ENSG00000204250	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q31.1v	L1	L1	L1FLnI	chr9	102662503	102673466	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL365396.1	ENSG00000234269	249108	LINC00587	ENSG00000204250	4989	None	None
L1FLnI_9q31.1w	L1	L1	L1FLnI	chr9	102810562	102820215	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00587	ENSG00000204250	153048	AL365396.1	ENSG00000234269	102359	None	None
L1FLnI_9q31.1x	L1	L1	L1FLnI	chr9	103433097	103443174	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP291	ENSG00000253031	246299	AL390962.1	ENSG00000226566	3205	None	None
L1FLnI_9q31.1y	L1	L1	L1FLnI	chr9	103465261	103475718	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP291	ENSG00000253031	213755	AL390962.1	ENSG00000226566	35369	None	None
L1FLnI_9q31.1z	L1	L1	L1FLnI	chr9	103549953	103559420	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390962.1	ENSG00000226566	120061	RNA5SP291	ENSG00000253031	130053	None	None
L1FLnI_9q31.1aa	L1	L1	L1FLnI	chr9	103570645	103580186	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390962.1	ENSG00000226566	140753	RNA5SP291	ENSG00000253031	109287	None	None
L1FLnI_9q31.1ba	L1	L1	L1FLnI	chr9	103605784	103615935	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP291	ENSG00000253031	73538	AL390962.1	ENSG00000226566	175892	None	None
L1FLnI_9q31.1ca	L1	L1	L1FLnI	chr9	104699669	104709381	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR13D1	ENSG00000179055	4184	OR13D3P	ENSG00000188712	12954	None	None
L1FLnI_9q31.2a	L1	L1	L1FLnI	chr9	105489008	105499147	-	coding	FSD1L	protein_coding	ANTISENSE	ENSG00000106701	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q31.2b	L1	L1	L1FLnI	chr9	105559677	105569799	+	coding	FKTN	protein_coding	SENSE	ENSG00000106692	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q31.2c	L1	L1	L1FLnI	chr9	105575669	105585692	-	coding	FKTN	protein_coding	ANTISENSE	ENSG00000106692	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q31.2d	L1	L1	L1FLnI	chr9	105776562	105786578	-	coding	TMEM38B	protein_coding	ANTISENSE	ENSG00000095209	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q31.2e	L1	L1	L1FLnI	chr9	105784577	105794710	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC25A6P5	ENSG00000228948	55000	TMEM38B	ENSG00000095209	7948	None	None
L1FLnI_9q31.2f	L1	L1	L1FLnI	chr9	105894250	105903949	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01505	ENSG00000234323	89361	SLC25A6P5	ENSG00000228948	42825	None	None
L1FLnI_9q31.2g	L1	L1	L1FLnI	chr9	106181119	106191141	-	coding	LINC01505	lncRNA	ANTISENSE	ENSG00000234323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q31.2h	L1	L1	L1FLnI	chr9	106197853	106207991	-	coding	LINC01505	lncRNA	ANTISENSE	ENSG00000234323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q31.2i	L1	L1	L1FLnI	chr9	106353277	106362855	-	noncoding	LINC01505	lncRNA	ANTISENSE	ENSG00000234323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q31.2j	L1	L1	L1FLnI	chr9	106601490	106611630	+	coding	LINC01505	lncRNA	SENSE	ENSG00000234323	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q31.2k	L1	L1	L1FLnI	chr9	106805686	106815850	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01505	ENSG00000234323	64811	RNA5SP292	ENSG00000212276	27899	None	None
L1FLnI_9q31.2l	L1	L1	L1FLnI	chr9	106899373	106909915	-	noncoding	ZNF462	protein_coding	ANTISENSE	ENSG00000148143	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr9:106908979-106908982
L1FLnI_9q31.2m	L1	L1	L1FLnI	chr9	106899755	106909915	-	noncoding	ZNF462	protein_coding	ANTISENSE	ENSG00000148143	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr9:106908979-106908982
L1FLnI_9q31.2n	L1	L1	L1FLnI	chr9	108026075	108036234	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC068050.1	ENSG00000213557	3979	RPS15AP27	ENSG00000236783	62030	None	None
L1FLnI_9q31.2o	L1	L1	L1FLnI	chr9	108026094	108036234	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC068050.1	ENSG00000213557	3979	RPS15AP27	ENSG00000236783	62049	None	None
L1FLnI_9q31.2p	L1	L1	L1FLnI	chr9	108194306	108205733	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CHCHD4P2	ENSG00000237360	96455	AL353742.1	ENSG00000230030	46421	None	None
L1FLnI_9q31.2q	L1	L1	L1FLnI	chr9	108368244	108379037	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL669983.1	ENSG00000169253	247796	AL353742.1	ENSG00000230030	113424	None	None
L1FLnI_9q31.2r	L1	L1	L1FLnI	chr9	108370006	108379037	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL669983.1	ENSG00000169253	247796	AL353742.1	ENSG00000230030	115186	None	None
L1FLnI_9q31.2s	L1	L1	L1FLnI	chr9	108455672	108464245	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353742.1	ENSG00000230030	200852	AL669983.1	ENSG00000169253	162588	None	None
L1FLnI_9q31.2t	L1	L1	L1FLnI	chr9	108497593	108507615	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL353742.1	ENSG00000230030	242773	AL669983.1	ENSG00000169253	119218	None	None
L1FLnI_9q31.3a	L1	L1	L1FLnI	chr9	108709990	108720087	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358779.1	ENSG00000231678	6898	RPL36AP35	ENSG00000231810	101610	None	None
L1FLnI_9q31.3b	L1	L1	L1FLnI	chr9	109659709	109669822	-	coding	PALM2AKAP2	protein_coding	ANTISENSE	ENSG00000157654	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q31.3c	L1	L1	L1FLnI	chr9	109831895	109842027	+	noncoding	PALM2AKAP2	protein_coding	SENSE	ENSG00000157654	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q31.3d	L1	L1	L1FLnI	chr9	109999512	110009673	-	coding	PALM2AKAP2	protein_coding	ANTISENSE	ENSG00000157654	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q31.3e	L1	L1	L1FLnI	chr9	110228931	110239411	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TXN	ENSG00000136810	4399	C9orf152	ENSG00000188959	20742	None	None
L1FLnI_9q31.3f	L1	L1	L1FLnI	chr9	110389900	110399998	+	coding	SVEP1	protein_coding	ANTISENSE	ENSG00000165124	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q31.3g	L1	L1	L1FLnI	chr9	110413604	110423626	+	coding	SVEP1	protein_coding	ANTISENSE	ENSG00000165124	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q31.3h	L1	L1	L1FLnI	chr9	110787599	110797629	+	coding	MUSK	protein_coding	SENSE	ENSG00000030304	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q32a	L1	L1	L1FLnI	chr9	112797629	112807659	-	coding	SNX30	protein_coding	ANTISENSE	ENSG00000148158	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q32b	L1	L1	L1FLnI	chr9	112987652	112997969	-	coding	ZNF883,ZNF883	transcribed_unprocessed_pseudogene,protein_coding	SENSE,SENSE	ENSG00000228623,ENSG00000285447	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr9:112995006-112995529	None
L1FLnI_9q32c	L1	L1	L1FLnI	chr9	113437062	113447090	-	coding	RGS3	protein_coding	ANTISENSE	ENSG00000138835	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr9:113444727-113444732,chr9:113444737-113444746
L1FLnI_9q33.1a	L1	L1	L1FLnI	chr9	115720065	115730488	+	noncoding	AL691420.1	lncRNA	ANTISENSE	ENSG00000228714	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q33.1b	L1	L1	L1FLnI	chr9	115871939	115881864	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00474	ENSG00000204148	6305	AL691420.1	ENSG00000228714	127609	None	None
L1FLnI_9q33.1c	L1	L1	L1FLnI	chr9	116508517	116518633	-	coding	ASTN2,ASTN2-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000148219,ENSG00000229105	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:116508868-116508947	None
L1FLnI_9q33.1d	L1	L1	L1FLnI	chr9	116513184	116523170	+	coding	ASTN2,ASTN2-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000148219,ENSG00000229105	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:116522834-116523218	None
L1FLnI_9q33.1e	L1	L1	L1FLnI	chr9	116513184	116522309	+	noncoding	ASTN2,ASTN2-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000148219,ENSG00000229105	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q33.1f	L1	L1	L1FLnI	chr9	116530874	116540704	-	coding	ASTN2,ASTN2-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000148219,ENSG00000229105	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q33.1g	L1	L1	L1FLnI	chr9	117065519	117075536	-	coding	ASTN2	protein_coding	SENSE	ENSG00000148219	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr9:117073923-117074100	None
L1FLnI_9q33.1h	L1	L1	L1FLnI	chr9	117202545	117211791	+	coding	ASTN2	protein_coding	ANTISENSE	ENSG00000148219	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q33.1i	L1	L1	L1FLnI	chr9	118013176	118021883	-	coding	AL160272.2	protein_coding	ANTISENSE	ENSG00000285082	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q33.1j	L1	L1	L1FLnI	chr9	118495085	118505152	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355592.1	ENSG00000225050	182600	TPT1P9	ENSG00000234782	411703	None	None
L1FLnI_9q33.1k	L1	L1	L1FLnI	chr9	118501048	118511177	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TPT1P9	ENSG00000234782	417666	AL355592.1	ENSG00000225050	176575	None	None
L1FLnI_9q33.1l	L1	L1	L1FLnI	chr9	118722149	118731257	-	noncoding	AL355592.1	lncRNA	SENSE	ENSG00000225050	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q33.1m	L1	L1	L1FLnI	chr9	118852036	118862277	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUBB4BP6	ENSG00000231166	87691	BRINP1	ENSG00000078725	291181	None	None
L1FLnI_9q33.1n	L1	L1	L1FLnI	chr9	118915477	118925763	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BRINP1	ENSG00000078725	227695	TUBB4BP6	ENSG00000231166	151132	None	None
L1FLnI_9q33.1o	L1	L1	L1FLnI	chr9	118915795	118925763	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BRINP1	ENSG00000078725	227695	TUBB4BP6	ENSG00000231166	151450	None	None
L1FLnI_9q33.1p	L1	L1	L1FLnI	chr9	119062903	119071676	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	BRINP1	ENSG00000078725	81782	TUBB4BP6	ENSG00000231166	298558	None	None
L1FLnI_9q33.1q	L1	L1	L1FLnI	chr9	119165618	119175632	+	coding	BRINP1	protein_coding	ANTISENSE	ENSG00000078725	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q33.1r	L1	L1	L1FLnI	chr9	119620806	119630850	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01613	ENSG00000261432	304203	AC006288.1	ENSG00000260970	96681	None	None
L1FLnI_9q33.1s	L1	L1	L1FLnI	chr9	119620826	119630850	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01613	ENSG00000261432	304203	AC006288.1	ENSG00000260970	96701	None	None
L1FLnI_9q33.2a	L1	L1	L1FLnI	chr9	120051737	120061764	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL441989.1	ENSG00000225960	77415	MIR147A	ENSG00000207814	183215	None	None
L1FLnI_9q33.2b	L1	L1	L1FLnI	chr9	121095528	121105033	+	coding	CNTRL	protein_coding	SENSE	ENSG00000119397	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q33.2c	L1	L1	L1FLnI	chr9	121127158	121137288	-	noncoding	CNTRL	protein_coding	ANTISENSE	ENSG00000119397	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q33.2d	L1	L1	L1FLnI	chr9	121414591	121423591	-	noncoding	AL359644.1	lncRNA	ANTISENSE	ENSG00000227355	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q33.2e	L1	L1	L1FLnI	chr9	122408135	122418273	-	coding	AL359636.2	lncRNA	ANTISENSE	ENSG00000234156	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q33.2f	L1	L1	L1FLnI	chr9	122589646	122599670	-	coding	AL359636.2	lncRNA	ANTISENSE	ENSG00000234156	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q33.2g	L1	L1	L1FLnI	chr9	122639533	122650905	+	noncoding	AL359636.2	lncRNA	SENSE	ENSG00000234156	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q33.3a	L1	L1	L1FLnI	chr9	123899872	123909865	+	coding	DENND1A	protein_coding	ANTISENSE	ENSG00000119522	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q33.3b	L1	L1	L1FLnI	chr9	125006550	125016689	+	coding	SCAI	protein_coding	ANTISENSE	ENSG00000173611	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q33.3c	L1	L1	L1FLnI	chr9	125006550	125016712	+	coding	SCAI	protein_coding	ANTISENSE	ENSG00000173611	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q33.3d	L1	L1	L1FLnI	chr9	126175828	126185233	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL162391.2	ENSG00000288537	84888	AL589923.1	ENSG00000232413	16215	None	None
L1FLnI_9q33.3e	L1	L1	L1FLnI	chr9	126175828	126184365	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL162391.2	ENSG00000288537	85756	AL589923.1	ENSG00000232413	16215	None	None
L1FLnI_9q33.3f	L1	L1	L1FLnI	chr9	126990166	126999678	+	coding	RALGPS1	protein_coding	SENSE	ENSG00000136828	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q33.3g	L1	L1	L1FLnI	chr9	126990166	126999662	+	coding	RALGPS1	protein_coding	SENSE	ENSG00000136828	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_9q34.2	L1	L1	L1FLnI	chr9	133306523	133316545	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL772161.2	ENSG00000201843	3960	LCN1P2	ENSG00000204031	1249	None	None
L1FLnI_9q34.3	L1	L1	L1FLnI	chr9	138323716	138334137	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	FO082796.2	ENSG00000286255	2881	None	None
L1FLnI_10p15.3a	L1	L1	L1FLnI	chr10	31979	41992	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC215217.1	ENSG00000260370	15435	AL713922.1	ENSG00000237297	2720	None	None
L1FLnI_10p15.3b	L1	L1	L1FLnI	chr10	755531	764245	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL157709.1	ENSG00000231601	10573	LARP4B	ENSG00000107929	42669	None	None
L1FLnI_10p15.3c	L1	L1	L1FLnI	chr10	1220918	1231055	-	coding	LINC00200,ADARB2	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000229205,ENSG00000185736	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p15.3d	L1	L1	L1FLnI	chr10	1298518	1308592	+	coding	ADARB2	protein_coding	ANTISENSE	ENSG00000185736	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p15.2	L1	L1	L1FLnI	chr10	3603790	3613377	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357833.1	ENSG00000236892	47476	AL450322.2	ENSG00000229672	135589	None	None
L1FLnI_10p15.1a	L1	L1	L1FLnI	chr10	5124254	5132838	+	noncoding	AKR1C5P	unprocessed_pseudogene	ANTISENSE	ENSG00000225418	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p15.1b	L1	L1	L1FLnI	chr10	5174472	5184639	-	coding	AKR1C8P	protein_coding	SENSE	ENSG00000264006	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p15.1c	L1	L1	L1FLnI	chr10	5219181	5229345	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AKR1C4	ENSG00000198610	232	AL355303.1	ENSG00000231039	5013	None	None
L1FLnI_10p15.1d	L1	L1	L1FLnI	chr10	5230999	5241377	+	coding	AL355303.1	lncRNA	SENSE	ENSG00000231039	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_10p15.1	L1	L1	L1FLI	chr10	5244353	5252399	+	coding	AL355303.1	lncRNA	SENSE	ENSG00000231039	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_10p15.1	L1	L1	L1ORF2	chr10	6368623	6376669	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PRKCQ	ENSG00000065675	50474	LINC02649	ENSG00000215244	14796	None	None
L1FLnI_10p15.1e	L1	L1	L1FLnI	chr10	6445287	6454584	+	noncoding	PRKCQ	protein_coding	ANTISENSE	ENSG00000065675	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p14a	L1	L1	L1FLnI	chr10	6803645	6813801	-	coding	AL158210.1,AL392086.2,LINC00707,AL392086.1	lncRNA,lncRNA,lncRNA,lncRNA	ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000285743,ENSG00000285988,ENSG00000238266,ENSG00000285845	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p14b	L1	L1	L1FLnI	chr10	7057536	7066971	-	coding	AL392086.3	lncRNA	SENSE	ENSG00000287277	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p14c	L1	L1	L1FLnI	chr10	7057552	7066971	-	coding	AL392086.3	lncRNA	SENSE	ENSG00000287277	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p14d	L1	L1	L1FLnI	chr10	7134048	7143456	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL392086.3	ENSG00000287277	15579	AL590095.1	ENSG00000270811	10664	None	None
L1FLnI_10p14e	L1	L1	L1FLnI	chr10	9516380	9526529	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL138773.1	ENSG00000287120	206608	HSP90AB7P	ENSG00000235838	195434	None	None
L1FLnI_10p14f	L1	L1	L1FLnI	chr10	9954444	9964238	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02663	ENSG00000228636	76384	LINC02670	ENSG00000224788	94484	None	None
L1FLnI_10p14g	L1	L1	L1FLnI	chr10	10068876	10078958	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP3	ENSG00000229919	95272	LINC02670	ENSG00000224788	5374	None	None
L1FLnI_10p14h	L1	L1	L1FLnI	chr10	10501046	10509568	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136452.1	ENSG00000228997	266655	CELF2-DT	ENSG00000270111	38685	chr10:10503550-10503825	chr10:10506699-10506701
L1FLnI_10p14i	L1	L1	L1FLnI	chr10	10647359	10657384	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CELF2-DT	ENSG00000270111	184998	AL136452.1	ENSG00000228997	118839	None	None
L1FLnI_10p14j	L1	L1	L1FLnI	chr10	10690508	10700498	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL136452.1	ENSG00000228997	75725	CELF2-DT	ENSG00000270111	228147	None	None
L1ORF2_10p14	L1	L1	L1ORF2	chr10	11730423	11738470	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ECHDC3	ENSG00000134463	3896	AL512631.1	ENSG00000271046	49909	None	None
L1FLnI_10p13a	L1	L1	L1FLnI	chr10	12852956	12862257	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CAMK1D	ENSG00000183049	17411	AL353586.1	ENSG00000285520	15202	None	None
L1FLnI_10p13b	L1	L1	L1FLnI	chr10	13025758	13035003	+	coding	CCDC3	protein_coding	ANTISENSE	ENSG00000151468	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p13c	L1	L1	L1FLnI	chr10	14742566	14751344	-	noncoding	FAM107B	protein_coding	SENSE	ENSG00000065809	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p13d	L1	L1	L1FLnI	chr10	15266426	15275312	+	noncoding	FAM171A1	protein_coding	ANTISENSE	ENSG00000148468	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p13e	L1	L1	L1FLnI	chr10	15664020	15673540	-	coding	ITGA8	protein_coding	SENSE	ENSG00000077943	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p13f	L1	L1	L1FLnI	chr10	15872001	15882175	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358033.1	ENSG00000252537	123633	MINDY3	ENSG00000148481	11494	None	None
L1ORF2_10p13	L1	L1	L1ORF2	chr10	15914719	15922762	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL358033.1	ENSG00000252537	83046	MINDY3	ENSG00000148481	54212	None	None
L1FLnI_10p13g	L1	L1	L1FLnI	chr10	16171080	16181224	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1075P	ENSG00000201260	26597	FTLP19	ENSG00000237913	99271	None	None
L1FLnI_10p13h	L1	L1	L1FLnI	chr10	16553206	16563193	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RSU1	ENSG00000148484	27418	AL353576.1	ENSG00000287925	13469	None	None
L1FLnI_10p13i	L1	L1	L1FLnI	chr10	16553666	16563193	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RSU1	ENSG00000148484	27418	AL353576.1	ENSG00000287925	13929	None	None
L1FLnI_10p12.33a	L1	L1	L1FLnI	chr10	17717379	17726477	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM236	ENSG00000148483	25724	STAM	ENSG00000136738	555	None	None
L1FLnI_10p12.33b	L1	L1	L1FLnI	chr10	18030142	18040175	-	coding	SLC39A12	protein_coding	ANTISENSE	ENSG00000148482	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p12.33c	L1	L1	L1FLnI	chr10	18030153	18040175	-	coding	SLC39A12	protein_coding	ANTISENSE	ENSG00000148482	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p12.31a	L1	L1	L1FLnI	chr10	18583990	18594387	+	noncoding	NSUN6	protein_coding	ANTISENSE	ENSG00000241058	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p12.31b	L1	L1	L1FLnI	chr10	18623920	18633922	+	coding	NSUN6	protein_coding	ANTISENSE	ENSG00000241058	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p12.31c	L1	L1	L1FLnI	chr10	18933062	18941775	-	noncoding	AL357520.1	processed_pseudogene	ANTISENSE	ENSG00000234813	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p12.31d	L1	L1	L1FLnI	chr10	18989643	18999092	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL357520.1	ENSG00000234813	48690	MALRD1	ENSG00000204740	49709	None	None
L1FLI_10p12.31	L1	L1	L1FLI	chr10	19087568	19095620	-	coding	MALRD1	protein_coding	ANTISENSE	ENSG00000204740	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p12.31e	L1	L1	L1FLnI	chr10	19439848	19449843	-	coding	MALRD1	protein_coding	ANTISENSE	ENSG00000204740	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p12.31f	L1	L1	L1FLnI	chr10	19580719	19590752	-	coding	MALRD1	protein_coding	ANTISENSE	ENSG00000204740	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p12.31g	L1	L1	L1FLnI	chr10	19580733	19590752	-	coding	MALRD1	protein_coding	ANTISENSE	ENSG00000204740	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p12.31h	L1	L1	L1FLnI	chr10	19676178	19685349	-	noncoding	MALRD1	protein_coding	ANTISENSE	ENSG00000204740	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p12.31i	L1	L1	L1FLnI	chr10	20290918	20301072	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AMD1P1	ENSG00000228339	48977	PLXDC2	ENSG00000120594	1062	None	None
L1FLnI_10p12.31j	L1	L1	L1FLnI	chr10	20334745	20343497	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AMD1P1	ENSG00000228339	6552	PLXDC2	ENSG00000120594	44889	None	None
L1FLnI_10p12.31k	L1	L1	L1FLnI	chr10	20363955	20374345	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590032.1	ENSG00000270727	172826	AMD1P1	ENSG00000228339	12855	None	chr10:20370469-20370502,chr10:20370575-20370601
L1FLnI_10p12.31l	L1	L1	L1FLnI	chr10	20436240	20445857	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590032.1	ENSG00000270727	101314	AMD1P1	ENSG00000228339	85140	None	None
L1FLnI_10p12.31m	L1	L1	L1FLnI	chr10	20459183	20469329	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590032.1	ENSG00000270727	77842	AMD1P1	ENSG00000228339	108083	None	None
L1FLnI_10p12.31n	L1	L1	L1FLnI	chr10	20495132	20504443	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590032.1	ENSG00000270727	42728	AMD1P1	ENSG00000228339	144032	None	None
L1FLnI_10p12.31o	L1	L1	L1FLnI	chr10	20525196	20535346	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590032.1	ENSG00000270727	11825	AMD1P1	ENSG00000228339	174096	None	None
L1FLnI_10p12.31p	L1	L1	L1FLnI	chr10	20525216	20535346	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590032.1	ENSG00000270727	11825	AMD1P1	ENSG00000228339	174116	None	None
L1FLnI_10p12.31q	L1	L1	L1FLnI	chr10	20551906	20562097	+	coding	MIR4675	miRNA	SENSE	ENSG00000265372	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr10:20552669-20553066	None
L1FLnI_10p12.31r	L1	L1	L1FLnI	chr10	20751169	20761192	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NEBL	ENSG00000078114	18781	MIR4675	ENSG00000265372	199123	None	None
L1FLnI_10p12.31s	L1	L1	L1FLnI	chr10	20933955	20944102	+	coding	NEBL	protein_coding	ANTISENSE	ENSG00000078114	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p12.31t	L1	L1	L1FLnI	chr10	22057226	22067359	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	DNAJC1	ENSG00000136770	53457	ADIPOR1P1	ENSG00000232497	95633	None	None
L1FLnI_10p12.31u	L1	L1	L1FLnI	chr10	22073849	22084256	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ADIPOR1P1	ENSG00000232497	78736	DNAJC1	ENSG00000136770	70080	None	None
L1FLnI_10p12.31v	L1	L1	L1FLnI	chr10	22085779	22095965	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DNAJC1	ENSG00000136770	82010	ADIPOR1P1	ENSG00000232497	67027	None	None
L1FLnI_10p12.31w	L1	L1	L1FLnI	chr10	22085779	22095986	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DNAJC1	ENSG00000136770	82010	ADIPOR1P1	ENSG00000232497	67006	None	None
L1FLnI_10p12.31x	L1	L1	L1FLnI	chr10	22123411	22133439	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ADIPOR1P1	ENSG00000232497	29553	DNAJC1	ENSG00000136770	119642	None	None
L1FLnI_10p12.2a	L1	L1	L1FLnI	chr10	22402639	22412652	-	coding	SPAG6,AL513128.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000077327,ENSG00000233451	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p12.2b	L1	L1	L1FLnI	chr10	22507590	22518002	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PIP4K2A	ENSG00000150867	16852	AL513128.3	ENSG00000286810	28110	None	None
L1FLnI_10p12.2c	L1	L1	L1FLnI	chr10	22520236	22529716	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PIP4K2A	ENSG00000150867	5138	AL513128.3	ENSG00000286810	40756	chr10:22525577-22525638	None
L1FLnI_10p12.2d	L1	L1	L1FLnI	chr10	22740935	22749555	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PIP4K2A	ENSG00000150867	26357	RNU6-413P	ENSG00000206842	37838	None	None
L1FLnI_10p12.2e	L1	L1	L1FLnI	chr10	22740935	22749578	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PIP4K2A	ENSG00000150867	26357	RNU6-413P	ENSG00000206842	37815	None	None
L1FLnI_10p12.2f	L1	L1	L1FLnI	chr10	23220633	23230095	+	coding	C10orf67	protein_coding	ANTISENSE	ENSG00000179133	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p12.2g	L1	L1	L1FLnI	chr10	23506001	23515573	-	noncoding	AL512603.2	lncRNA	ANTISENSE	ENSG00000287124	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr10:23512407-23512709	chr10:23512650-23512661
L1FLnI_10p12.2h	L1	L1	L1FLnI	chr10	23589281	23599433	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	KIAA1217	ENSG00000120549	95313	AL512603.1	ENSG00000286442	3057	None	None
L1FLnI_10p12.2i	L1	L1	L1FLnI	chr10	23665918	23676062	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KIAA1217	ENSG00000120549	18684	AL512603.1	ENSG00000286442	79694	None	None
L1FLnI_10p12.2j	L1	L1	L1FLnI	chr10	23850515	23860662	-	coding	KIAA1217	protein_coding	ANTISENSE	ENSG00000120549	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p12.2k	L1	L1	L1FLnI	chr10	24061639	24071791	-	coding	KIAA1217	protein_coding	ANTISENSE	ENSG00000120549	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p12.1a	L1	L1	L1FLnI	chr10	25246816	25256840	-	coding	GPR158	protein_coding	ANTISENSE	ENSG00000151025	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p12.1b	L1	L1	L1FLnI	chr10	25510061	25518876	-	coding	GPR158	protein_coding	ANTISENSE	ENSG00000151025	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p12.1c	L1	L1	L1FLnI	chr10	25514871	25524891	-	coding	GPR158	protein_coding	ANTISENSE	ENSG00000151025	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p12.1d	L1	L1	L1FLnI	chr10	25608679	25619984	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GPN3P1	ENSG00000227465	27586	GPR158	ENSG00000151025	6450	None	None
L1FLnI_10p12.1e	L1	L1	L1FLnI	chr10	25615687	25625936	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GPR158	ENSG00000151025	13458	GPN3P1	ENSG00000227465	21634	None	None
L1FLnI_10p12.1f	L1	L1	L1FLnI	chr10	25990019	25999717	-	coding	MYO3A	protein_coding	ANTISENSE	ENSG00000095777	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p12.1g	L1	L1	L1FLnI	chr10	26075362	26085587	-	noncoding	MYO3A	protein_coding	ANTISENSE	ENSG00000095777	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p12.1h	L1	L1	L1FLnI	chr10	26096891	26107012	-	coding	MYO3A	protein_coding	ANTISENSE	ENSG00000095777	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p12.1i	L1	L1	L1FLnI	chr10	27295755	27305870	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARMC4P1	ENSG00000238021	6931	AL355493.4	ENSG00000278830	7853	None	None
L1FLnI_10p12.1j	L1	L1	L1FLnI	chr10	27295755	27305860	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARMC4P1	ENSG00000238021	6931	AL355493.4	ENSG00000278830	7863	None	None
L1FLnI_10p12.1k	L1	L1	L1FLnI	chr10	27414773	27424890	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PTCHD3	ENSG00000182077	405	RAB18	ENSG00000099246	79284	None	None
L1FLnI_10p12.1l	L1	L1	L1FLnI	chr10	27583535	27593939	+	noncoding	LINC02680	lncRNA	SENSE	ENSG00000285737	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p12.1m	L1	L1	L1FLnI	chr10	27841524	27850055	+	coding	ARMC4	protein_coding	ANTISENSE	ENSG00000169126	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p12.1n	L1	L1	L1FLnI	chr10	27869864	27879052	-	coding	ARMC4	protein_coding	SENSE	ENSG00000169126	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p12.1o	L1	L1	L1FLnI	chr10	27895519	27904237	+	coding	ARMC4,RPL36AP55	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000169126,ENSG00000226016	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.23a	L1	L1	L1FLnI	chr10	30145843	30155913	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-598P	ENSG00000200887	143656	JCAD	ENSG00000165757	30349	chr10:30152139-30152428	None
L1FLnI_10p11.23b	L1	L1	L1FLnI	chr10	30268326	30278735	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	JCAD	ENSG00000165757	152832	RNU6-598P	ENSG00000200887	20834	None	None
L1FLnI_10p11.23c	L1	L1	L1FLnI	chr10	30944538	30953659	+	coding	ZNF438	protein_coding	ANTISENSE	ENSG00000183621	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.22a	L1	L1	L1FLnI	chr10	31105887	31115507	-	coding	AL359546.1	lncRNA	ANTISENSE	ENSG00000287564	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.22b	L1	L1	L1FLnI	chr10	31229110	31237848	+	coding	LINC02664,ZEB1-AS1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000272381,ENSG00000237036	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.22c	L1	L1	L1FLnI	chr10	31442914	31452937	-	coding	ZEB1	protein_coding	ANTISENSE	ENSG00000148516	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.22d	L1	L1	L1FLnI	chr10	31465712	31475723	+	coding	ZEB1	protein_coding	SENSE	ENSG00000148516	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.22e	L1	L1	L1FLnI	chr10	31486159	31495259	-	noncoding	ZEB1	protein_coding	ANTISENSE	ENSG00000148516	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr10:31489530-31489543
L1FLnI_10p11.22f	L1	L1	L1FLnI	chr10	31502911	31513064	-	coding	ZEB1	protein_coding	ANTISENSE	ENSG00000148516	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.22g	L1	L1	L1FLnI	chr10	31562293	31571946	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161935.1	ENSG00000223834	30916	ZEB1	ENSG00000148516	32479	None	None
L1FLnI_10p11.22h	L1	L1	L1FLnI	chr10	31637148	31645686	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MACORIS	ENSG00000237797	47398	AL161935.2	ENSG00000231855	8549	None	None
L1FLnI_10p11.22i	L1	L1	L1FLnI	chr10	31713207	31723315	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL353769.1	ENSG00000222412	32727	MACORIS	ENSG00000237797	5819	None	None
L1FLnI_10p11.22j	L1	L1	L1FLnI	chr10	32482000	32492133	-	coding	CCDC7	protein_coding	ANTISENSE	ENSG00000216937	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.22k	L1	L1	L1FLnI	chr10	32493901	32502603	-	coding	CCDC7	protein_coding	ANTISENSE	ENSG00000216937	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.22l	L1	L1	L1FLnI	chr10	32548147	32558225	-	noncoding	CCDC7	protein_coding	ANTISENSE	ENSG00000216937	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.22m	L1	L1	L1FLnI	chr10	32555179	32565314	+	coding	CCDC7	protein_coding	SENSE	ENSG00000216937	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.22n	L1	L1	L1FLnI	chr10	32592057	32602118	-	coding	CCDC7	protein_coding	ANTISENSE	ENSG00000216937	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.22o	L1	L1	L1FLnI	chr10	32698556	32708657	-	coding	CCDC7	protein_coding	ANTISENSE	ENSG00000216937	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.22p	L1	L1	L1FLnI	chr10	32710608	32721086	+	noncoding	CCDC7	protein_coding	SENSE	ENSG00000216937	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.22q	L1	L1	L1FLnI	chr10	32751154	32761255	+	coding	CCDC7	protein_coding	SENSE	ENSG00000216937	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.22r	L1	L1	L1FLnI	chr10	32812365	32822473	+	noncoding	CCDC7	protein_coding	SENSE	ENSG00000216937	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.22s	L1	L1	L1FLnI	chr10	32834817	32843596	+	noncoding	CCDC7	protein_coding	SENSE	ENSG00000216937	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.22t	L1	L1	L1FLnI	chr10	32868075	32877072	-	coding	CCDC7	protein_coding	ANTISENSE	ENSG00000216937	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.22u	L1	L1	L1FLnI	chr10	32908678	32918855	+	noncoding	ITGB1	protein_coding	ANTISENSE	ENSG00000150093	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr10:32911956-32911982,chr10:32911627-32911647,chr10:32911663-32911675,chr10:32912056-32912132,chr10:32911654-32911658
L1FLI_10p11.22	L1	L1	L1FLI	chr10	33509833	33517879	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02628	ENSG00000226412	61052	AL353600.2	ENSG00000287278	118898	None	None
L1FLnI_10p11.22v	L1	L1	L1FLnI	chr10	33690410	33700239	-	noncoding	AL450313.1	lncRNA	ANTISENSE	ENSG00000203565	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.22w	L1	L1	L1FLnI	chr10	33848004	33857250	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL23P11	ENSG00000226407	7063	LINC00838	ENSG00000261683	75302	None	None
L1FLnI_10p11.22x	L1	L1	L1FLnI	chr10	34063992	34074105	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02629	ENSG00000223470	146188	PARD3	ENSG00000148498	35455	None	None
L1FLnI_10p11.21a	L1	L1	L1FLnI	chr10	35470284	35480271	+	coding	CCNY	protein_coding	SENSE	ENSG00000108100	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.21b	L1	L1	L1FLnI	chr10	35855170	35865195	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PCAT5	ENSG00000280719	54250	LINC02630	ENSG00000227313	31679	None	None
L1FLnI_10p11.21c	L1	L1	L1FLnI	chr10	36007616	36017143	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL355300.1	ENSG00000227475	71943	LINC02630	ENSG00000227313	108653	None	None
L1FLnI_10p11.21d	L1	L1	L1FLnI	chr10	36077100	36087106	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355300.1	ENSG00000227475	1980	LINC02630	ENSG00000227313	178137	None	None
L1FLnI_10p11.21e	L1	L1	L1FLnI	chr10	36892456	36902574	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL390061.1	ENSG00000238176	37535	AL354660.1	ENSG00000207271	266318	None	None
L1FLnI_10p11.21f	L1	L1	L1FLnI	chr10	37038255	37048409	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ANKRD30A	ENSG00000148513	77316	ARL6IP1P2	ENSG00000225355	42670	None	None
L1FLnI_10p11.21g	L1	L1	L1FLnI	chr10	37044410	37054152	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANKRD30A	ENSG00000148513	71573	ARL6IP1P2	ENSG00000225355	48825	None	None
L1FLnI_10p11.21h	L1	L1	L1FLnI	chr10	37534483	37544603	+	coding	TACC1P1	unprocessed_pseudogene	SENSE	ENSG00000224920	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.21i	L1	L1	L1FLnI	chr10	37689934	37699477	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTRNR2L7	ENSG00000256892	86960	AL132657.1	ENSG00000226578	75894	None	None
L1FLnI_10p11.21j	L1	L1	L1FLnI	chr10	37762140	37772287	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTRNR2L7	ENSG00000256892	159166	AL132657.1	ENSG00000226578	3084	None	None
L1FLnI_10p11.21k	L1	L1	L1FLnI	chr10	37893472	37903488	+	coding	ZNF33CP	processed_pseudogene	SENSE	ENSG00000235197	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.21l	L1	L1	L1FLnI	chr10	37991945	38001951	+	coding	ZNF25-DT,AL117337.1	lncRNA,misc_RNA	SENSE,SENSE	ENSG00000226447,ENSG00000206840	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr10:37995411-37995437	None
L1FLnI_10p11.1a	L1	L1	L1FLnI	chr10	38102656	38111994	+	noncoding	ZNF37A,AL117339.5	protein_coding,protein_coding	SENSE,SENSE	ENSG00000075407,ENSG00000283930	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr10:38104475-38104480
L1FLnI_10p11.1b	L1	L1	L1FLnI	chr10	38184024	38193488	+	noncoding	AL117339.5,AL117339.1	protein_coding,transcribed_unprocessed_pseudogene	SENSE,SENSE	ENSG00000283930,ENSG00000224761	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.1c	L1	L1	L1FLnI	chr10	38212770	38222900	+	coding	AL117339.5	protein_coding	SENSE	ENSG00000283930	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.1d	L1	L1	L1FLnI	chr10	38655691	38665830	+	noncoding	SLC9B1P3	unprocessed_pseudogene	ANTISENSE	ENSG00000233867	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10p11.1e	L1	L1	L1FLnI	chr10	38989044	38999250	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	KSR1P1	ENSG00000229485	3150060	AL590623.1	ENSG00000233832	205936	None	None
L1FLnI_10p11.1f	L1	L1	L1FLnI	chr10	39255808	39265913	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590623.1	ENSG00000233832	472700	KSR1P1	ENSG00000229485	2883397	None	None
L1FLnI_10p11.1g	L1	L1	L1FLnI	chr10	39366634	39376725	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	KSR1P1	ENSG00000229485	2772585	AL590623.1	ENSG00000233832	583526	None	None
L1FLnI_10p11.1h	L1	L1	L1FLnI	chr10	39445992	39455395	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	KSR1P1	ENSG00000229485	2693915	AL590623.1	ENSG00000233832	662884	None	None
L1ORF2_10p11.1	L1	L1	L1ORF2	chr10	39465246	39473295	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	KSR1P1	ENSG00000229485	2676015	AL590623.1	ENSG00000233832	682138	None	None
L1FLnI_10p11.1i	L1	L1	L1FLnI	chr10	39504654	39514660	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590623.1	ENSG00000233832	721546	KSR1P1	ENSG00000229485	2634650	None	None
L1FLnI_10q11.21a	L1	L1	L1FLnI	chr10	41745916	41755849	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL590623.1	ENSG00000233832	2962808	KSR1P1	ENSG00000229485	393461	None	None
L1FLnI_10q11.21b	L1	L1	L1FLnI	chr10	41797412	41807397	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	KSR1P1	ENSG00000229485	341913	AL590623.1	ENSG00000233832	3014304	None	None
L1FLnI_10q11.21c	L1	L1	L1FLnI	chr10	42139493	42149644	-	coding	KSR1P1	processed_pseudogene	SENSE	ENSG00000229485	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q11.21d	L1	L1	L1FLnI	chr10	42139505	42149644	-	coding	KSR1P1	processed_pseudogene	SENSE	ENSG00000229485	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q11.21e	L1	L1	L1FLnI	chr10	42257284	42267422	-	noncoding	AL031601.2	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000274167	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q11.21f	L1	L1	L1FLnI	chr10	42431883	42441912	+	coding	CCNYL2	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000182632	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q11.21g	L1	L1	L1FLnI	chr10	42525717	42535721	-	coding	ZNF37BP	transcribed_processed_pseudogene	SENSE	ENSG00000234420	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q11.21h	L1	L1	L1FLnI	chr10	42525730	42535721	-	coding	ZNF37BP	transcribed_processed_pseudogene	SENSE	ENSG00000234420	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q11.21i	L1	L1	L1FLnI	chr10	42533249	42543662	-	noncoding	ZNF37BP	transcribed_processed_pseudogene	SENSE	ENSG00000234420	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q11.21j	L1	L1	L1FLnI	chr10	42661630	42671799	+	coding	LINC01518,VN1R54P	lncRNA,processed_pseudogene	ANTISENSE,SENSE	ENSG00000233515,ENSG00000232109	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q11.21k	L1	L1	L1FLnI	chr10	43527753	43537114	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF239	ENSG00000196793	19230	AL450326.2	ENSG00000236114	2536	None	None
L1FLnI_10q11.21l	L1	L1	L1FLnI	chr10	43713212	43723342	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF32-AS3	ENSG00000223910	38509	AL355989.1	ENSG00000271173	4875	None	None
L1FLnI_10q11.21m	L1	L1	L1FLnI	chr10	43830711	43840512	-	coding	LINC00840	lncRNA	ANTISENSE	ENSG00000226808	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q11.21n	L1	L1	L1FLnI	chr10	43914306	43924400	-	coding	LINC00841	lncRNA	ANTISENSE	ENSG00000233395	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q11.21o	L1	L1	L1FLnI	chr10	44087422	44097556	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00841	ENSG00000233395	106320	AL137026.2	ENSG00000237590	162046	None	chr10:44088908-44088912
L1FLnI_10q11.21p	L1	L1	L1FLnI	chr10	44106236	44116397	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137026.2	ENSG00000237590	143205	LINC00841	ENSG00000233395	125134	None	None
L1FLnI_10q11.21q	L1	L1	L1FLnI	chr10	44146772	44155746	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL137026.2	ENSG00000237590	103856	LINC00841	ENSG00000233395	165670	None	None
L1FLnI_10q11.21r	L1	L1	L1FLnI	chr10	44264817	44274969	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL137026.2	ENSG00000237590	3004	AL137026.1	ENSG00000229116	7520	None	None
L1FLnI_10q11.21s	L1	L1	L1FLnI	chr10	44405663	44415353	-	noncoding	RPL9P21	processed_pseudogene	SENSE	ENSG00000214089	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q11.21t	L1	L1	L1FLnI	chr10	44447739	44458159	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL356157.2	ENSG00000270767	30176	RPL9P21	ENSG00000214089	32586	None	None
L1FLnI_10q11.21u	L1	L1	L1FLnI	chr10	44482320	44491754	-	coding	AL356157.2	processed_pseudogene	SENSE	ENSG00000270767	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q11.21v	L1	L1	L1FLnI	chr10	44590335	44600832	+	noncoding	AL356157.1	lncRNA	ANTISENSE	ENSG00000234580	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q11.21w	L1	L1	L1FLnI	chr10	45008675	45018696	-	coding	CEP164P1,AL358394.3	transcribed_processed_pseudogene,lncRNA	SENSE,SENSE	ENSG00000226937,ENSG00000277757	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q11.21x	L1	L1	L1FLnI	chr10	45262303	45272452	+	noncoding	OR6D1P	transcribed_unitary_pseudogene	SENSE	ENSG00000224402	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q11.21y	L1	L1	L1FLnI	chr10	45262303	45272441	+	noncoding	OR6D1P	transcribed_unitary_pseudogene	SENSE	ENSG00000224402	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q11.21z	L1	L1	L1FLnI	chr10	45296392	45305497	-	coding	OR13A1	protein_coding	SENSE	ENSG00000256574	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q11.21aa	L1	L1	L1FLnI	chr10	45337987	45346629	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR13A1	ENSG00000256574	22379	ALOX5	ENSG00000012779	27547	None	None
L1FLnI_10q11.21ba	L1	L1	L1FLnI	chr10	45358661	45368673	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR13A1	ENSG00000256574	43053	ALOX5	ENSG00000012779	5503	None	None
L1FLnI_10q11.22a	L1	L1	L1FLnI	chr10	46236233	46245477	+	noncoding	ANTXRLP1	unprocessed_pseudogene	ANTISENSE	ENSG00000263482	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q11.22b	L1	L1	L1FLnI	chr10	47428262	47437770	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ANXA8	ENSG00000265190	22392	ZNF488	ENSG00000265763	43969	None	None
L1FLnI_10q11.22c	L1	L1	L1FLnI	chr10	48368722	48377870	+	noncoding	MAPK8	protein_coding	SENSE	ENSG00000107643	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q11.23a	L1	L1	L1FLnI	chr10	49242729	49252137	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM273	ENSG00000204161	54144	C10orf71-AS1	ENSG00000236208	43975	None	None
L1FLnI_10q11.23b	L1	L1	L1FLnI	chr10	49419104	49429274	-	coding	AL138760.1	lncRNA	ANTISENSE	ENSG00000235939	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q11.23c	L1	L1	L1FLnI	chr10	49419123	49429274	-	coding	AL138760.1	lncRNA	ANTISENSE	ENSG00000235939	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q11.23d	L1	L1	L1FLnI	chr10	49711456	49721559	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C10orf53	ENSG00000178645	1195	OGDHL	ENSG00000197444	13082	None	None
L1FLnI_10q11.23e	L1	L1	L1FLnI	chr10	50781976	50792087	-	coding	ASAH2B	protein_coding	ANTISENSE	ENSG00000204147	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.1a	L1	L1	L1FLnI	chr10	51275466	51284893	-	coding	PRKG1	protein_coding	ANTISENSE	ENSG00000185532	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.1b	L1	L1	L1FLnI	chr10	51610570	51620893	-	noncoding	PRKG1	protein_coding	ANTISENSE	ENSG00000185532	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.1c	L1	L1	L1FLnI	chr10	51940956	51951115	-	coding	PRKG1	protein_coding	ANTISENSE	ENSG00000185532	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.1d	L1	L1	L1FLnI	chr10	52001920	52010971	+	noncoding	PRKG1	protein_coding	SENSE	ENSG00000185532	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.1e	L1	L1	L1FLnI	chr10	52174363	52183197	-	noncoding	PRKG1	protein_coding	ANTISENSE	ENSG00000185532	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.1f	L1	L1	L1FLnI	chr10	52174363	52183176	-	noncoding	PRKG1	protein_coding	ANTISENSE	ENSG00000185532	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.1g	L1	L1	L1FLnI	chr10	52229830	52239834	+	coding	PRKG1,PRKG1-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000185532,ENSG00000236671	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.1h	L1	L1	L1FLnI	chr10	52359697	52369839	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL31P44	ENSG00000213657	19273	DKK1	ENSG00000107984	41655	None	None
L1FLnI_10q21.1i	L1	L1	L1FLnI	chr10	52369910	52379182	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL31P44	ENSG00000213657	9930	DKK1	ENSG00000107984	51868	None	None
L1FLnI_10q21.1j	L1	L1	L1FLnI	chr10	52584179	52594531	-	noncoding	LNCAROD	lncRNA	SENSE	ENSG00000231131	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.1k	L1	L1	L1FLnI	chr10	52729857	52740027	-	coding	LNCAROD	lncRNA	SENSE	ENSG00000231131	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.1l	L1	L1	L1FLnI	chr10	52823772	52832272	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MBL2	ENSG00000165471	52072	AL365506.1	ENSG00000201196	20335	None	None
L1FLnI_10q21.1m	L1	L1	L1FLnI	chr10	52840411	52849902	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL365506.1	ENSG00000201196	2705	MBL2	ENSG00000165471	68711	None	None
L1FLnI_10q21.1n	L1	L1	L1FLnI	chr10	53269998	53278497	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SNRPEP8	ENSG00000231399	231454	AC036101.1	ENSG00000226296	12575	None	None
L1FLnI_10q21.1o	L1	L1	L1FLnI	chr10	53366622	53376730	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC036101.1	ENSG00000226296	55557	RNA5SP318	ENSG00000252161	81467	None	None
L1FLnI_10q21.1p	L1	L1	L1FLnI	chr10	53493508	53503523	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL365496.1	ENSG00000233805	262877	RNA5SP318	ENSG00000252161	35220	None	None
L1FLnI_10q21.1q	L1	L1	L1FLnI	chr10	53791851	53801280	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PCDH15	ENSG00000150275	1491	AL365496.1	ENSG00000233805	25237	None	None
L1FLnI_10q21.1r	L1	L1	L1FLnI	chr10	54006008	54017403	+	noncoding	PCDH15	protein_coding	ANTISENSE	ENSG00000150275	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.1s	L1	L1	L1FLnI	chr10	54006008	54016433	+	noncoding	PCDH15	protein_coding	ANTISENSE	ENSG00000150275	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.1t	L1	L1	L1FLnI	chr10	54284906	54294971	+	noncoding	PCDH15	protein_coding	ANTISENSE	ENSG00000150275	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.1u	L1	L1	L1FLnI	chr10	54511489	54521725	+	coding	PCDH15,AL353784.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000150275,ENSG00000234173	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.1v	L1	L1	L1FLnI	chr10	54590377	54600164	+	coding	PCDH15,AL353784.1,NEFMP1	protein_coding,lncRNA,processed_pseudogene	ANTISENSE,SENSE,SENSE	ENSG00000150275,ENSG00000234173,ENSG00000224697	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.1w	L1	L1	L1FLnI	chr10	54696494	54705824	+	noncoding	PCDH15	protein_coding	ANTISENSE	ENSG00000150275	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.1x	L1	L1	L1FLnI	chr10	54923844	54932916	-	noncoding	PCDH15	protein_coding	SENSE	ENSG00000150275	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.1y	L1	L1	L1FLnI	chr10	55598377	55608410	+	coding	PCDH15,MTRNR2L5	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000150275,ENSG00000249860	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	chr10:55599041-55599042
L1FLnI_10q21.1z	L1	L1	L1FLnI	chr10	55682578	55692592	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC069545.1	ENSG00000270541	53959	GAPDHP21	ENSG00000236993	14228	None	None
L1FLnI_10q21.1aa	L1	L1	L1FLnI	chr10	55798845	55807724	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC069545.1	ENSG00000270541	51937	ZWINT	ENSG00000122952	549503	None	None
L1FLnI_10q21.1ba	L1	L1	L1FLnI	chr10	55896143	55906183	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC069545.1	ENSG00000270541	149235	ZWINT	ENSG00000122952	451044	None	None
L1FLnI_10q21.1ca	L1	L1	L1FLnI	chr10	56182834	56192765	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC069545.1	ENSG00000270541	435926	ZWINT	ENSG00000122952	164462	None	None
L1FLnI_10q21.1da	L1	L1	L1FLnI	chr10	56182834	56192785	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC069545.1	ENSG00000270541	435926	ZWINT	ENSG00000122952	164442	None	None
L1FLnI_10q21.1ea	L1	L1	L1FLnI	chr10	56250691	56259482	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZWINT	ENSG00000122952	97745	AC069545.1	ENSG00000270541	503783	None	None
L1FLnI_10q21.1fa	L1	L1	L1FLnI	chr10	56380157	56388759	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025039.1	ENSG00000238707	207204	AC010996.1	ENSG00000287016	15443	None	None
L1FLnI_10q21.1ga	L1	L1	L1FLnI	chr10	56441581	56451736	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC025039.1	ENSG00000238707	144227	AC010996.1	ENSG00000287016	76867	None	None
L1FLnI_10q21.1ha	L1	L1	L1FLnI	chr10	56680323	56690458	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC025039.1	ENSG00000238707	84292	MIR3924	ENSG00000264747	614021	None	None
L1FLnI_10q21.1ia	L1	L1	L1FLnI	chr10	56821035	56829625	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025039.1	ENSG00000238707	225004	MIR3924	ENSG00000264747	474854	None	None
L1FLnI_10q21.1ja	L1	L1	L1FLnI	chr10	57344965	57354265	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL731534.1	ENSG00000235810	158892	MIR3924	ENSG00000264747	40406	None	None
L1FLnI_10q21.1ka	L1	L1	L1FLnI	chr10	57545784	57555869	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006484.1	ENSG00000223841	399426	AL731534.1	ENSG00000235810	32359	None	None
L1FLnI_10q21.1la	L1	L1	L1FLnI	chr10	57581408	57590576	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL731534.1	ENSG00000235810	67983	AC006484.1	ENSG00000223841	364719	None	None
L1FLnI_10q21.1ma	L1	L1	L1FLnI	chr10	57714079	57722670	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL731534.1	ENSG00000235810	200654	AC006484.1	ENSG00000223841	232625	None	None
L1FLnI_10q21.1na	L1	L1	L1FLnI	chr10	57775348	57785471	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL731534.1	ENSG00000235810	261923	AC006484.1	ENSG00000223841	169824	None	None
L1FLnI_10q21.1oa	L1	L1	L1FLnI	chr10	58030786	58040364	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC026884.1	ENSG00000232115	66059	MRPS35P3	ENSG00000270192	47793	None	None
L1FLnI_10q21.1pa	L1	L1	L1FLnI	chr10	58226229	58236326	+	noncoding	IPMK	protein_coding	ANTISENSE	ENSG00000151151	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.1qa	L1	L1	L1FLnI	chr10	58417281	58427344	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	BICC1	ENSG00000122870	85528	TFAM	ENSG00000108064	18061	None	None
L1FLnI_10q21.1ra	L1	L1	L1FLnI	chr10	58530883	58540043	+	noncoding	BICC1	protein_coding	SENSE	ENSG00000122870	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.1sa	L1	L1	L1FLnI	chr10	58672344	58682136	+	coding	BICC1	protein_coding	SENSE	ENSG00000122870	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.1ta	L1	L1	L1FLnI	chr10	58681366	58691484	-	noncoding	BICC1	protein_coding	ANTISENSE	ENSG00000122870	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.1ua	L1	L1	L1FLnI	chr10	58876214	58885013	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00844	ENSG00000237949	114469	RN7SKP196	ENSG00000252076	6686	None	None
L1FLnI_10q21.1va	L1	L1	L1FLnI	chr10	59037346	59047490	-	noncoding	LINC00844	lncRNA	ANTISENSE	ENSG00000237949	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.2a	L1	L1	L1FLnI	chr10	59407829	59417956	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MRPL50P4	ENSG00000235469	133448	AL355474.1	ENSG00000287969	43754	None	None
L1FLnI_10q21.2b	L1	L1	L1FLnI	chr10	59411258	59420763	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355474.1	ENSG00000287969	47183	MRPL50P4	ENSG00000235469	130641	None	None
L1FLnI_10q21.2c	L1	L1	L1FLnI	chr10	59421524	59431079	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MRPL50P4	ENSG00000235469	120325	AL355474.1	ENSG00000287969	57449	None	None
L1FLnI_10q21.2d	L1	L1	L1FLnI	chr10	59466629	59476276	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL355474.1	ENSG00000287969	102554	MRPL50P4	ENSG00000235469	75128	None	None
L1FLnI_10q21.2e	L1	L1	L1FLnI	chr10	59524703	59534863	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL355474.1	ENSG00000287969	160628	MRPL50P4	ENSG00000235469	16541	None	None
L1FLnI_10q21.2f	L1	L1	L1FLnI	chr10	60213914	60222803	-	noncoding	ANK3	protein_coding	SENSE	ENSG00000151150	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.2g	L1	L1	L1FLnI	chr10	60689462	60699410	+	coding	ANK3	protein_coding	ANTISENSE	ENSG00000151150	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.2h	L1	L1	L1FLnI	chr10	60689462	60699397	+	coding	ANK3	protein_coding	ANTISENSE	ENSG00000151150	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.2i	L1	L1	L1FLnI	chr10	61002442	61012534	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00845	ENSG00000227244	3741	RHOBTB1	ENSG00000072422	1002	None	None
L1FLnI_10q21.2j	L1	L1	L1FLnI	chr10	62602252	62612255	-	coding	ZNF365,AC024598.1,AC067752.1	protein_coding,lncRNA,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000138311,ENSG00000285837,ENSG00000285551	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr10:62611584-62611693	None
L1FLnI_10q21.2k	L1	L1	L1FLnI	chr10	62671716	62681859	-	coding	AC024598.1,AC067752.1	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000285837,ENSG00000285551	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr10:62681251-62681639	chr10:62681565-62681587
L1FLnI_10q21.3a	L1	L1	L1FLnI	chr10	62946128	62956267	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	EGR2	ENSG00000122877	26228	RNU6-543P	ENSG00000199446	153872	None	None
L1FLnI_10q21.3b	L1	L1	L1FLnI	chr10	63786783	63795438	+	noncoding	AC013287.1	lncRNA	SENSE	ENSG00000228566	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3c	L1	L1	L1FLnI	chr10	63851192	63861342	-	coding	AC013287.1	lncRNA	ANTISENSE	ENSG00000228566	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3d	L1	L1	L1FLnI	chr10	63944140	63954272	-	coding	AC013287.1	lncRNA	ANTISENSE	ENSG00000228566	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3e	L1	L1	L1FLnI	chr10	64014844	64025047	-	coding	AC013287.1	lncRNA	ANTISENSE	ENSG00000228566	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3f	L1	L1	L1FLnI	chr10	64116785	64126815	+	coding	AC013287.1	lncRNA	SENSE	ENSG00000228566	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3g	L1	L1	L1FLnI	chr10	64435855	64446023	-	coding	AC013287.1	lncRNA	ANTISENSE	ENSG00000228566	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3h	L1	L1	L1FLnI	chr10	64803840	64814396	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ANXA2P3	ENSG00000216740	11176	CYP2C61P	ENSG00000270648	40668	None	None
L1FLnI_10q21.3i	L1	L1	L1FLnI	chr10	64920787	64930761	+	coding	LINC02671	lncRNA	ANTISENSE	ENSG00000224714	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3j	L1	L1	L1FLnI	chr10	65457810	65467613	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01515	ENSG00000228065	102725	AL592466.1	ENSG00000235356	142730	None	None
L1FLnI_10q21.3k	L1	L1	L1FLnI	chr10	65512611	65524098	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01515	ENSG00000228065	46240	AL592466.1	ENSG00000235356	197531	None	None
L1FLnI_10q21.3l	L1	L1	L1FLnI	chr10	65514259	65524098	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01515	ENSG00000228065	46240	AL592466.1	ENSG00000235356	199179	None	None
L1FLnI_10q21.3m	L1	L1	L1FLnI	chr10	65586613	65596741	-	coding	LINC01515	lncRNA	ANTISENSE	ENSG00000228065	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3n	L1	L1	L1FLnI	chr10	65952889	65963020	-	noncoding	CTNNA3	protein_coding	SENSE	ENSG00000183230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3o	L1	L1	L1FLnI	chr10	66157036	66167143	-	noncoding	CTNNA3	protein_coding	SENSE	ENSG00000183230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3p	L1	L1	L1FLnI	chr10	66157043	66167143	-	noncoding	CTNNA3	protein_coding	SENSE	ENSG00000183230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3q	L1	L1	L1FLnI	chr10	66331068	66339879	-	coding	CTNNA3	protein_coding	SENSE	ENSG00000183230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3r	L1	L1	L1FLnI	chr10	66378465	66388605	+	coding	CTNNA3	protein_coding	ANTISENSE	ENSG00000183230	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3s	L1	L1	L1FLnI	chr10	66410712	66421018	+	coding	CTNNA3	protein_coding	ANTISENSE	ENSG00000183230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3t	L1	L1	L1FLnI	chr10	66432181	66442646	-	noncoding	CTNNA3	protein_coding	SENSE	ENSG00000183230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3u	L1	L1	L1FLnI	chr10	66439175	66449337	+	coding	CTNNA3	protein_coding	ANTISENSE	ENSG00000183230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3v	L1	L1	L1FLnI	chr10	66581087	66591953	-	noncoding	CTNNA3	protein_coding	SENSE	ENSG00000183230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3w	L1	L1	L1FLnI	chr10	66582833	66591953	-	coding	CTNNA3	protein_coding	SENSE	ENSG00000183230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3x	L1	L1	L1FLnI	chr10	66600793	66609560	+	noncoding	CTNNA3	protein_coding	ANTISENSE	ENSG00000183230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3y	L1	L1	L1FLnI	chr10	66895895	66906019	+	noncoding	CTNNA3	protein_coding	ANTISENSE	ENSG00000183230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3z	L1	L1	L1FLnI	chr10	67227167	67237174	+	noncoding	CTNNA3	protein_coding	ANTISENSE	ENSG00000183230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3aa	L1	L1	L1FLnI	chr10	67321721	67332334	-	coding	CTNNA3	protein_coding	SENSE	ENSG00000183230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3ba	L1	L1	L1FLnI	chr10	67383546	67393569	+	noncoding	CTNNA3	protein_coding	ANTISENSE	ENSG00000183230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3ca	L1	L1	L1FLnI	chr10	67496447	67506924	-	noncoding	CTNNA3	protein_coding	SENSE	ENSG00000183230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3da	L1	L1	L1FLnI	chr10	67555007	67565144	+	coding	CTNNA3	protein_coding	ANTISENSE	ENSG00000183230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3ea	L1	L1	L1FLnI	chr10	67578566	67588694	-	coding	CTNNA3	protein_coding	SENSE	ENSG00000183230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3fa	L1	L1	L1FLnI	chr10	67633170	67642516	+	coding	CTNNA3	protein_coding	ANTISENSE	ENSG00000183230	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q21.3ga	L1	L1	L1FLnI	chr10	67696134	67706291	+	coding	CTNNA3	protein_coding	ANTISENSE	ENSG00000183230	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr10:67696115-67696202,chr10:67696207-67696216,chr10:67696219-67696224
L1FLnI_10q22.1a	L1	L1	L1FLnI	chr10	70638982	70649118	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADAMTS14	ENSG00000138316	23388	PRF1	ENSG00000180644	36223	None	None
L1FLnI_10q22.1b	L1	L1	L1FLnI	chr10	72431922	72442064	+	noncoding	MICU1	protein_coding	ANTISENSE	ENSG00000107745	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q22.1c	L1	L1	L1FLnI	chr10	72977363	72985945	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL17P50	ENSG00000213700	19888	PLA2G12B	ENSG00000138308	22557	None	None
L1FLnI_10q22.1d	L1	L1	L1FLnI	chr10	73018090	73028107	+	noncoding	P4HA1	protein_coding	ANTISENSE	ENSG00000122884	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q22.2a	L1	L1	L1FLnI	chr10	73319836	73330000	+	coding	CFAP70	protein_coding	ANTISENSE	ENSG00000156042	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q22.2b	L1	L1	L1FLnI	chr10	74213382	74223521	+	coding	ADK	protein_coding	SENSE	ENSG00000156110	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q22.2c	L1	L1	L1FLnI	chr10	74343642	74354087	+	coding	ADK,TIMM9P1	protein_coding,processed_pseudogene	SENSE,ANTISENSE	ENSG00000156110,ENSG00000236900	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q22.2d	L1	L1	L1FLnI	chr10	74602762	74613201	-	noncoding	ADK	protein_coding	ANTISENSE	ENSG00000156110	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q22.2e	L1	L1	L1FLnI	chr10	75515202	75525337	-	coding	LRMDA	protein_coding	ANTISENSE	ENSG00000148655	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q22.2f	L1	L1	L1FLnI	chr10	75558032	75568186	-	coding	LRMDA	protein_coding	ANTISENSE	ENSG00000148655	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q22.2g	L1	L1	L1FLnI	chr10	75572081	75582086	+	noncoding	LRMDA	protein_coding	SENSE	ENSG00000148655	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q22.3a	L1	L1	L1FLnI	chr10	76142194	76152337	-	coding	LRMDA	protein_coding	ANTISENSE	ENSG00000148655	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q22.3b	L1	L1	L1FLnI	chr10	76142210	76152337	-	coding	LRMDA	protein_coding	ANTISENSE	ENSG00000148655	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q22.3c	L1	L1	L1FLnI	chr10	76500377	76509502	-	noncoding	LRMDA	protein_coding	ANTISENSE	ENSG00000148655	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_10q22.3	L1	L1	L1ORF2	chr10	76584719	76592768	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC024603.1	ENSG00000269256	23725	AC013738.1	ENSG00000252888	242609	None	None
L1FLnI_10q22.3d	L1	L1	L1FLnI	chr10	76605014	76615328	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC024603.1	ENSG00000269256	44020	AC013738.1	ENSG00000252888	220049	None	None
L1FLnI_10q22.3e	L1	L1	L1FLnI	chr10	76707487	76717330	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC024603.1	ENSG00000269256	146493	AC013738.1	ENSG00000252888	118047	None	None
L1FLnI_10q22.3f	L1	L1	L1FLnI	chr10	76746579	76755747	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC024603.1	ENSG00000269256	185585	AC013738.1	ENSG00000252888	79630	None	None
L1FLnI_10q22.3g	L1	L1	L1FLnI	chr10	76842712	76852831	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ATP5MC1P8	ENSG00000224948	5851	KCNMA1	ENSG00000156113	16770	None	None
L1FLnI_10q22.3h	L1	L1	L1FLnI	chr10	77991012	77999808	+	coding	POLR3A	protein_coding	ANTISENSE	ENSG00000148606	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q22.3i	L1	L1	L1FLnI	chr10	78084952	78094979	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GNAI2P2	ENSG00000231957	15414	AL731555.1	ENSG00000283096	81949	None	None
L1FLnI_10q22.3j	L1	L1	L1FLnI	chr10	78321705	78332777	-	noncoding	AC012560.2,LINC00595	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000282863,ENSG00000230417	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr10:78331554-78331886	None
L1FLnI_10q22.3k	L1	L1	L1FLnI	chr10	78663658	78673043	+	noncoding	AC012560.2	lncRNA	SENSE	ENSG00000282863	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q22.3l	L1	L1	L1FLnI	chr10	78675995	78686151	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC016820.1	ENSG00000228683	9911	AC012560.2	ENSG00000282863	886	None	None
L1FLnI_10q22.3m	L1	L1	L1FLnI	chr10	79566895	79576989	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SFTPA2	ENSG00000185303	6488	MBL3P	ENSG00000219430	5309	None	None
L1FLnI_10q22.3n	L1	L1	L1FLnI	chr10	79952667	79962810	+	coding	SFTPD	protein_coding	ANTISENSE	ENSG00000133661	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.1a	L1	L1	L1FLnI	chr10	80300557	80310312	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF519P1	ENSG00000232950	902	AL359195.1	ENSG00000235858	23459	None	None
L1FLnI_10q23.1b	L1	L1	L1FLnI	chr10	80635296	80645008	-	noncoding	SH2D4B	protein_coding	ANTISENSE	ENSG00000178217	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.1c	L1	L1	L1FLnI	chr10	80722011	80732044	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC027673.1	ENSG00000233703	17588	RPS7P9	ENSG00000233353	4943	chr10:80722335-80722348	None
L1FLnI_10q23.1d	L1	L1	L1FLnI	chr10	80814073	80823923	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FARSBP1	ENSG00000231060	35985	WARS2P1	ENSG00000227209	116742	None	None
L1FLnI_10q23.1e	L1	L1	L1FLnI	chr10	80835277	80845708	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	WARS2P1	ENSG00000227209	94957	FARSBP1	ENSG00000231060	57189	None	None
L1FLnI_10q23.1f	L1	L1	L1FLnI	chr10	80865679	80874676	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FARSBP1	ENSG00000231060	87591	WARS2P1	ENSG00000227209	65989	None	chr10:80872626-80872629
L1FLnI_10q23.1g	L1	L1	L1FLnI	chr10	80877970	80888104	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FARSBP1	ENSG00000231060	99882	WARS2P1	ENSG00000227209	52561	None	None
L1FLnI_10q23.1h	L1	L1	L1FLnI	chr10	81075927	81085104	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPA2P2	ENSG00000226466	51436	WARS2P1	ENSG00000227209	134726	None	None
L1FLnI_10q23.1i	L1	L1	L1FLnI	chr10	81086648	81097255	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPA2P2	ENSG00000226466	39285	WARS2P1	ENSG00000227209	145447	None	None
L1FLnI_10q23.1j	L1	L1	L1FLnI	chr10	81087120	81097255	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPA2P2	ENSG00000226466	39285	WARS2P1	ENSG00000227209	145919	None	None
L1FLnI_10q23.1k	L1	L1	L1FLnI	chr10	81282749	81293378	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPA2P2	ENSG00000226466	145414	AL096706.1	ENSG00000287358	577400	None	None
L1FLnI_10q23.1l	L1	L1	L1FLnI	chr10	81544350	81554761	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPA2P2	ENSG00000226466	407015	AL096706.1	ENSG00000287358	316017	None	None
L1FLnI_10q23.1m	L1	L1	L1FLnI	chr10	81638470	81648600	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL096706.1	ENSG00000287358	222178	RPA2P2	ENSG00000226466	501135	None	None
L1FLnI_10q23.1n	L1	L1	L1FLnI	chr10	81693137	81703544	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPA2P2	ENSG00000226466	555802	AL096706.1	ENSG00000287358	167234	None	None
L1FLnI_10q23.1o	L1	L1	L1FLnI	chr10	81706117	81716142	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPA2P2	ENSG00000226466	568782	AL096706.1	ENSG00000287358	154636	None	None
L1FLnI_10q23.1p	L1	L1	L1FLnI	chr10	81731457	81741567	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPA2P2	ENSG00000226466	594122	AL096706.1	ENSG00000287358	129211	None	None
L1FLnI_10q23.1q	L1	L1	L1FLnI	chr10	81762742	81771887	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL096706.1	ENSG00000287358	98891	RPA2P2	ENSG00000226466	625407	None	None
L1FLnI_10q23.1r	L1	L1	L1FLnI	chr10	81762742	81771837	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL096706.1	ENSG00000287358	98941	RPA2P2	ENSG00000226466	625407	None	None
L1FLnI_10q23.1s	L1	L1	L1FLnI	chr10	81767883	81776741	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL096706.1	ENSG00000287358	94037	RPA2P2	ENSG00000226466	630548	None	None
L1FLnI_10q23.1t	L1	L1	L1FLnI	chr10	82177719	82187021	-	noncoding	NRG3	protein_coding	ANTISENSE	ENSG00000185737	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.1u	L1	L1	L1FLnI	chr10	82343564	82353586	-	coding	NRG3	protein_coding	ANTISENSE	ENSG00000185737	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr10:82352856-82352901	None
L1FLnI_10q23.1v	L1	L1	L1FLnI	chr10	83085400	83095834	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-478P	ENSG00000200774	17329	MARK2P15	ENSG00000234931	215794	None	None
L1FLnI_10q23.1w	L1	L1	L1FLnI	chr10	83104992	83115417	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-478P	ENSG00000200774	36921	MARK2P15	ENSG00000234931	196211	None	None
L1FLnI_10q23.1x	L1	L1	L1FLnI	chr10	83105969	83115417	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-478P	ENSG00000200774	37898	MARK2P15	ENSG00000234931	196211	None	None
L1FLnI_10q23.1y	L1	L1	L1FLnI	chr10	83313237	83324914	+	noncoding	MARK2P15	processed_pseudogene	ANTISENSE	ENSG00000234931	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.1z	L1	L1	L1FLnI	chr10	83313237	83323467	+	noncoding	MARK2P15	processed_pseudogene	ANTISENSE	ENSG00000234931	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.1aa	L1	L1	L1FLnI	chr10	83336871	83346995	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02650	ENSG00000233945	325411	MARK2P15	ENSG00000234931	22396	None	None
L1FLnI_10q23.1ba	L1	L1	L1FLnI	chr10	83414979	83423537	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02650	ENSG00000233945	248869	MARK2P15	ENSG00000234931	100504	None	None
L1FLnI_10q23.1ca	L1	L1	L1FLnI	chr10	83465635	83474828	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MARK2P15	ENSG00000234931	151160	LINC02650	ENSG00000233945	197578	None	None
L1FLnI_10q23.1da	L1	L1	L1FLnI	chr10	83729302	83738828	-	noncoding	AC069540.1	processed_pseudogene	ANTISENSE	ENSG00000223565	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.1ea	L1	L1	L1FLnI	chr10	83741302	83750826	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-129P	ENSG00000212324	13532	AC069540.1	ENSG00000223565	4809	None	None
L1FLnI_10q23.1fa	L1	L1	L1FLnI	chr10	83780558	83790587	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL390786.1	ENSG00000233258	121067	RNU6-129P	ENSG00000212324	16094	None	None
L1FLnI_10q23.1ga	L1	L1	L1FLnI	chr10	84276469	84286506	+	coding	LINC00858	lncRNA	SENSE	ENSG00000229404	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.1ha	L1	L1	L1FLnI	chr10	84485245	84495376	-	coding	CCSER2	protein_coding	ANTISENSE	ENSG00000107771	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.1ia	L1	L1	L1FLnI	chr10	84644870	84655053	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358787.2	ENSG00000288218	501277	RPS3AP5	ENSG00000178429	83607	None	None
L1FLnI_10q23.1ja	L1	L1	L1FLnI	chr10	84644892	84655053	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358787.2	ENSG00000288218	501277	RPS3AP5	ENSG00000178429	83629	None	None
L1FLnI_10q23.1ka	L1	L1	L1FLnI	chr10	84723652	84733026	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS3AP5	ENSG00000178429	162389	AL358787.2	ENSG00000288218	423304	None	None
L1FLnI_10q23.1la	L1	L1	L1FLnI	chr10	84756366	84766382	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL358787.2	ENSG00000288218	389948	RPS3AP5	ENSG00000178429	195103	None	None
L1FLnI_10q23.1ma	L1	L1	L1FLnI	chr10	84756380	84766382	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL358787.2	ENSG00000288218	389948	RPS3AP5	ENSG00000178429	195117	None	None
L1FLnI_10q23.1na	L1	L1	L1FLnI	chr10	84772562	84782762	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL358787.2	ENSG00000288218	373568	RPS3AP5	ENSG00000178429	211299	None	None
L1FLnI_10q23.1oa	L1	L1	L1FLnI	chr10	84968459	84978609	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS3AP5	ENSG00000178429	407196	AL358787.2	ENSG00000288218	177721	None	None
L1FLnI_10q23.1pa	L1	L1	L1FLnI	chr10	85122248	85132383	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS3AP5	ENSG00000178429	560985	AL358787.2	ENSG00000288218	23947	None	None
L1FLnI_10q23.1qa	L1	L1	L1FLnI	chr10	85209439	85217950	+	noncoding	AL358787.1	lncRNA	SENSE	ENSG00000287057	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.1ra	L1	L1	L1FLnI	chr10	85273905	85284345	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02647	ENSG00000223993	93982	AL358787.1	ENSG00000287057	61105	None	None
L1FLnI_10q23.1sa	L1	L1	L1FLnI	chr10	85323842	85333290	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02647	ENSG00000223993	45037	AL358787.1	ENSG00000287057	111042	None	None
L1ORF2_10q23.1	L1	L1	L1ORF2	chr10	85354506	85362552	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL358787.1	ENSG00000287057	141706	LINC02647	ENSG00000223993	15775	None	None
L1FLnI_10q23.1ta	L1	L1	L1FLnI	chr10	85460646	85470720	+	noncoding	LINC01520	lncRNA	SENSE	ENSG00000230962	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.1ua	L1	L1	L1FLnI	chr10	85461239	85470720	+	noncoding	LINC01520	lncRNA	SENSE	ENSG00000230962	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.1va	L1	L1	L1FLnI	chr10	85498549	85508703	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL731532.1	ENSG00000279910	18177	LINC01520	ENSG00000230962	6548	None	None
L1FLnI_10q23.1wa	L1	L1	L1FLnI	chr10	85765842	85775990	+	coding	GRID1	protein_coding	ANTISENSE	ENSG00000182771	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.1xa	L1	L1	L1FLnI	chr10	85873120	85883280	+	coding	GRID1	protein_coding	ANTISENSE	ENSG00000182771	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.2	L1	L1	L1FLnI	chr10	87525041	87534812	-	coding	MINPP1	protein_coding	ANTISENSE	ENSG00000107789	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.31a	L1	L1	L1FLnI	chr10	87897306	87907481	-	coding	PTEN	protein_coding	ANTISENSE	ENSG00000171862	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr10:87904010-87904014
L1FLnI_10q23.31b	L1	L1	L1FLnI	chr10	88299367	88309797	+	coding	RNLS	protein_coding	ANTISENSE	ENSG00000184719	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.31c	L1	L1	L1FLnI	chr10	88300473	88309797	+	coding	RNLS	protein_coding	ANTISENSE	ENSG00000184719	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.31d	L1	L1	L1FLnI	chr10	88314177	88322860	+	noncoding	RNLS	protein_coding	ANTISENSE	ENSG00000184719	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.31e	L1	L1	L1FLnI	chr10	88349741	88359865	-	coding	RNLS	protein_coding	SENSE	ENSG00000184719	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.31f	L1	L1	L1FLnI	chr10	88439841	88449659	+	coding	RNLS	protein_coding	ANTISENSE	ENSG00000184719	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.31g	L1	L1	L1FLnI	chr10	88627964	88638238	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LIPF	ENSG00000182333	26203	RPL7P34	ENSG00000237205	9030	None	None
L1FLnI_10q23.31h	L1	L1	L1FLnI	chr10	88627967	88638238	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LIPF	ENSG00000182333	26203	RPL7P34	ENSG00000237205	9033	None	None
L1FLnI_10q23.31i	L1	L1	L1FLnI	chr10	89036102	89044866	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4679-2	ENSG00000265375	18469	AL157394.1	ENSG00000261438	19043	None	None
L1FLnI_10q23.31j	L1	L1	L1FLnI	chr10	89312604	89322727	+	noncoding	LIPA	protein_coding	ANTISENSE	ENSG00000107798	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.31k	L1	L1	L1FLnI	chr10	89441137	89451269	+	coding	SLC16A12	protein_coding	ANTISENSE	ENSG00000152779	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.31l	L1	L1	L1FLnI	chr10	89501960	89512243	+	noncoding	SLC16A12	protein_coding	ANTISENSE	ENSG00000152779	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.31m	L1	L1	L1FLnI	chr10	89774049	89785568	-	noncoding	KIF20B	protein_coding	ANTISENSE	ENSG00000138182	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.31n	L1	L1	L1FLnI	chr10	89891886	89901375	-	noncoding	LINC01374	lncRNA	ANTISENSE	ENSG00000280560	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.31o	L1	L1	L1FLnI	chr10	89905291	89915057	-	noncoding	LINC01374	lncRNA	ANTISENSE	ENSG00000280560	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.31p	L1	L1	L1FLnI	chr10	89905291	89914381	-	noncoding	LINC01374	lncRNA	ANTISENSE	ENSG00000280560	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.31q	L1	L1	L1FLnI	chr10	89931038	89941150	-	noncoding	LINC01374,LINC01375	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000280560,ENSG00000226159	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.31r	L1	L1	L1FLnI	chr10	90071731	90080590	-	coding	LINC01374,AL139340.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000280560,ENSG00000287150	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr10:90077936-90077956	None
L1FLnI_10q23.31s	L1	L1	L1FLnI	chr10	90112591	90122561	-	noncoding	LINC01374	lncRNA	ANTISENSE	ENSG00000280560	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.31t	L1	L1	L1FLnI	chr10	90152952	90162978	-	coding	LINC01374	lncRNA	ANTISENSE	ENSG00000280560	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.31u	L1	L1	L1FLnI	chr10	90226041	90235125	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01374	ENSG00000280560	598	LINC02653	ENSG00000236373	167396	None	None
L1FLnI_10q23.31v	L1	L1	L1FLnI	chr10	90226041	90235545	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01374	ENSG00000280560	598	LINC02653	ENSG00000236373	166976	None	None
L1FLnI_10q23.31w	L1	L1	L1FLnI	chr10	90247115	90257135	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01374	ENSG00000280560	21672	LINC02653	ENSG00000236373	145386	None	None
L1FLnI_10q23.31x	L1	L1	L1FLnI	chr10	90365326	90375454	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02653	ENSG00000236373	27067	LINC01374	ENSG00000280560	139883	None	None
L1FLnI_10q23.31y	L1	L1	L1FLnI	chr10	90514490	90523194	-	noncoding	LINC02653	lncRNA	SENSE	ENSG00000236373	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.31z	L1	L1	L1FLnI	chr10	90521827	90530869	-	noncoding	LINC02653	lncRNA	SENSE	ENSG00000236373	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.31aa	L1	L1	L1FLnI	chr10	90562736	90571299	-	noncoding	LINC02653	lncRNA	SENSE	ENSG00000236373	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.31ba	L1	L1	L1FLnI	chr10	90948816	90959263	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL365434.1	ENSG00000225519	35357	RNU6-740P	ENSG00000201604	25981	None	None
L1FLnI_10q23.32a	L1	L1	L1FLnI	chr10	91178847	91189529	-	noncoding	PCGF5	protein_coding	ANTISENSE	ENSG00000180628	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.32b	L1	L1	L1FLnI	chr10	91426352	91435431	-	coding	HECTD2	protein_coding	ANTISENSE	ENSG00000165338	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.32c	L1	L1	L1FLnI	chr10	91437593	91447174	-	noncoding	HECTD2	protein_coding	ANTISENSE	ENSG00000165338	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.32d	L1	L1	L1FLnI	chr10	91442080	91452029	+	noncoding	HECTD2	protein_coding	SENSE	ENSG00000165338	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.32e	L1	L1	L1FLnI	chr10	91499765	91509787	+	coding	HECTD2	protein_coding	SENSE	ENSG00000165338	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.32f	L1	L1	L1FLnI	chr10	91527681	91536279	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HECTD2	ENSG00000165338	12852	RPS27P1	ENSG00000223876	8573	None	None
L1FLnI_10q23.32g	L1	L1	L1FLnI	chr10	91640341	91650795	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PPP1R3C	ENSG00000119938	7270	GAPDHP28	ENSG00000213449	15985	None	None
L1FLnI_10q23.32h	L1	L1	L1FLnI	chr10	91746117	91756138	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP28	ENSG00000213449	78335	FAF2P1	ENSG00000228759	9761	None	None
L1FLnI_10q23.33a	L1	L1	L1FLnI	chr10	93517475	93527595	+	coding	CEP55	protein_coding	SENSE	ENSG00000138180	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.33b	L1	L1	L1FLnI	chr10	93731185	93740010	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FRA10AC1	ENSG00000148690	28593	LGI1	ENSG00000108231	17830	None	None
L1FLnI_10q23.33c	L1	L1	L1FLnI	chr10	93924201	93934326	+	coding	SLC35G1	protein_coding	SENSE	ENSG00000176273	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.33d	L1	L1	L1FLnI	chr10	94159124	94168978	-	coding	PLCE1	protein_coding	ANTISENSE	ENSG00000138193	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.33e	L1	L1	L1FLnI	chr10	94633841	94644286	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTBP2P2	ENSG00000235746	2078	HELLS	ENSG00000119969	19936	None	None
L1FLnI_10q23.33f	L1	L1	L1FLnI	chr10	94633848	94644286	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTBP2P2	ENSG00000235746	2078	HELLS	ENSG00000119969	19943	None	None
L1FLnI_10q23.33g	L1	L1	L1FLnI	chr10	94659430	94668432	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYP2C18	ENSG00000108242	15297	CTBP2P2	ENSG00000235746	11434	None	None
L1FLnI_10q23.33h	L1	L1	L1FLnI	chr10	94692058	94702136	+	coding	CYP2C18,AL583836.1	protein_coding,protein_coding	SENSE,SENSE	ENSG00000108242,ENSG00000276490	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.33i	L1	L1	L1FLnI	chr10	94787904	94797987	-	noncoding	AL583836.1,CYP2C19	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000276490,ENSG00000165841	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.33j	L1	L1	L1FLnI	chr10	94794515	94804650	-	noncoding	AL583836.1,CYP2C19	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000276490,ENSG00000165841	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.33k	L1	L1	L1FLnI	chr10	94824162	94834181	-	coding	AL583836.1,CYP2C19	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000276490,ENSG00000165841	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.33l	L1	L1	L1FLnI	chr10	94874795	94883370	-	noncoding	RPL7AP52	processed_pseudogene	ANTISENSE	ENSG00000225354	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.33m	L1	L1	L1FLnI	chr10	94954408	94964259	-	noncoding	CYP2C9	protein_coding	ANTISENSE	ENSG00000138109	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.33n	L1	L1	L1FLnI	chr10	94954424	94964259	-	noncoding	CYP2C9	protein_coding	ANTISENSE	ENSG00000138109	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.33o	L1	L1	L1FLnI	chr10	95017687	95027134	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359672.1	ENSG00000237885	4506	CYP2C60P	ENSG00000260863	7875	None	None
L1FLnI_10q23.33p	L1	L1	L1FLnI	chr10	95058152	95068084	-	coding	CYP2C8	protein_coding	SENSE	ENSG00000138115	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.33q	L1	L1	L1FLnI	chr10	95075717	95085609	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CYP2C8	ENSG00000138115	6220	AL157834.1	ENSG00000231829	23527	None	None
L1FLnI_10q23.33r	L1	L1	L1FLnI	chr10	95104800	95114924	-	coding	AL157834.1	lncRNA	SENSE	ENSG00000231829	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.33s	L1	L1	L1FLnI	chr10	95143887	95154032	+	coding	AL157834.4	lncRNA	ANTISENSE	ENSG00000288526	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q23.33t	L1	L1	L1FLnI	chr10	95143887	95154041	+	coding	AL157834.4	lncRNA	ANTISENSE	ENSG00000288526	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q24.1a	L1	L1	L1FLnI	chr10	95927912	95938350	-	noncoding	ENTPD1-AS1,CC2D2B	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000226688,ENSG00000188649	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr10:95928228-95928370	None
L1FLnI_10q24.1b	L1	L1	L1FLnI	chr10	96179849	96189848	-	noncoding	ZNF518A,NPM1P25	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000177853,ENSG00000229417	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q24.2a	L1	L1	L1FLnI	chr10	98176542	98186677	-	noncoding	R3HCC1L	protein_coding	ANTISENSE	ENSG00000166024	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q24.2b	L1	L1	L1FLnI	chr10	98494774	98503429	+	coding	HPSE2	protein_coding	ANTISENSE	ENSG00000172987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q24.2c	L1	L1	L1FLnI	chr10	98659911	98670397	+	noncoding	HPSE2	protein_coding	ANTISENSE	ENSG00000172987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr10:98660119-98660248	None
L1FLI_10q24.2	L1	L1	L1FLI	chr10	98781927	98789973	-	coding	HPSE2	protein_coding	SENSE	ENSG00000172987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q24.2d	L1	L1	L1FLnI	chr10	98933602	98943741	+	noncoding	HPSE2	protein_coding	ANTISENSE	ENSG00000172987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q24.2e	L1	L1	L1FLnI	chr10	98980172	98990158	+	coding	HPSE2	protein_coding	ANTISENSE	ENSG00000172987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q24.2f	L1	L1	L1FLnI	chr10	99095518	99105574	+	coding	HPSE2	protein_coding	ANTISENSE	ENSG00000172987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q24.2g	L1	L1	L1FLnI	chr10	99128947	99139383	+	noncoding	HPSE2	protein_coding	ANTISENSE	ENSG00000172987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q24.2h	L1	L1	L1FLnI	chr10	99149239	99159258	+	coding	HPSE2	protein_coding	ANTISENSE	ENSG00000172987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q24.2i	L1	L1	L1FLnI	chr10	99171324	99181102	+	noncoding	HPSE2	protein_coding	ANTISENSE	ENSG00000172987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q24.2j	L1	L1	L1FLnI	chr10	99189229	99198015	+	noncoding	HPSE2	protein_coding	ANTISENSE	ENSG00000172987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q24.2k	L1	L1	L1FLnI	chr10	99409020	99418562	+	coding	GOT1	protein_coding	ANTISENSE	ENSG00000120053	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr10:99410896-99411051	None
L1FLnI_10q24.2l	L1	L1	L1FLnI	chr10	99640069	99650187	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133353.2	ENSG00000285932	1408	AL353719.1	ENSG00000260475	18151	None	None
L1FLnI_10q24.31a	L1	L1	L1FLnI	chr10	100402832	100413000	+	coding	OLMALINC	lncRNA	SENSE	ENSG00000235823	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q24.31b	L1	L1	L1FLnI	chr10	100402832	100412984	+	coding	OLMALINC	lncRNA	SENSE	ENSG00000235823	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q24.31c	L1	L1	L1FLnI	chr10	100450992	100461065	+	coding	OLMALINC	lncRNA	SENSE	ENSG00000235823	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q25.1a	L1	L1	L1FLnI	chr10	104527836	104537877	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL161646.1	ENSG00000237761	29054	LINC02620	ENSG00000225768	47562	None	None
L1FLnI_10q25.1b	L1	L1	L1FLnI	chr10	104566603	104576102	-	noncoding	AL161646.1	lncRNA	ANTISENSE	ENSG00000237761	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q25.1c	L1	L1	L1FLnI	chr10	104719480	104729623	-	coding	SORCS3	protein_coding	ANTISENSE	ENSG00000156395	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q25.1d	L1	L1	L1FLnI	chr10	105318114	105327356	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-463P	ENSG00000207068	207303	SORCS3	ENSG00000156395	52872	None	None
L1ORF2_10q25.1	L1	L1	L1ORF2	chr10	105376334	105384379	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-463P	ENSG00000207068	150280	SORCS3	ENSG00000156395	111092	None	None
L1FLnI_10q25.1e	L1	L1	L1FLnI	chr10	105474325	105484675	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-463P	ENSG00000207068	49984	SORCS3	ENSG00000156395	209083	None	None
L1FLnI_10q25.1f	L1	L1	L1FLnI	chr10	105474335	105484675	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-463P	ENSG00000207068	49984	SORCS3	ENSG00000156395	209093	None	None
L1FLnI_10q25.1g	L1	L1	L1FLnI	chr10	105546710	105556735	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-463P	ENSG00000207068	11945	PPIAP38	ENSG00000233477	128648	None	None
L1FLnI_10q25.1h	L1	L1	L1FLnI	chr10	105732219	105742373	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	YWHAZP5	ENSG00000213260	45168	LINC02627	ENSG00000229466	65852	None	None
L1FLnI_10q25.1i	L1	L1	L1FLnI	chr10	105775022	105785051	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02627	ENSG00000229466	23174	YWHAZP5	ENSG00000213260	87971	None	None
L1FLnI_10q25.1j	L1	L1	L1FLnI	chr10	106111315	106121278	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589166.1	ENSG00000286609	123588	LINC02624	ENSG00000229775	18865	None	None
L1FLnI_10q25.1k	L1	L1	L1FLnI	chr10	106463736	106473815	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02624	ENSG00000229775	275014	RPL23AP59	ENSG00000215002	76291	None	None
L1FLnI_10q25.1l	L1	L1	L1FLnI	chr10	106463736	106473804	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02624	ENSG00000229775	275014	RPL23AP59	ENSG00000215002	76302	None	None
L1FLI_10q25.1a	L1	L1	L1FLI	chr10	106843566	106851614	-	coding	SORCS1	protein_coding	SENSE	ENSG00000108018	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q25.1m	L1	L1	L1FLnI	chr10	107766931	107777217	+	noncoding	LINC01435	lncRNA	ANTISENSE	ENSG00000229981	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q25.1n	L1	L1	L1FLnI	chr10	107875886	107885067	+	noncoding	LINC01435	lncRNA	ANTISENSE	ENSG00000229981	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q25.1o	L1	L1	L1FLnI	chr10	108110445	108120506	+	coding	LINC01435	lncRNA	ANTISENSE	ENSG00000229981	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q25.1p	L1	L1	L1FLnI	chr10	108209316	108219447	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PTGES3P5	ENSG00000234544	76652	LINC01435	ENSG00000229981	11467	None	chr10:108214699-108214705
L1FLnI_10q25.1q	L1	L1	L1FLnI	chr10	108209321	108219447	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PTGES3P5	ENSG00000234544	76652	LINC01435	ENSG00000229981	11472	None	chr10:108214699-108214705
L1FLnI_10q25.1r	L1	L1	L1FLnI	chr10	108266593	108276006	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTGES3P5	ENSG00000234544	20093	LINC01435	ENSG00000229981	68744	chr10:108270692-108271085	chr10:108272990-108272994
L1FLnI_10q25.1s	L1	L1	L1FLnI	chr10	108309632	108319639	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL353740.1	ENSG00000203434	228336	PTGES3P5	ENSG00000234544	13100	chr10:108309616-108309915	None
L1FLnI_10q25.1t	L1	L1	L1FLnI	chr10	108500912	108511026	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PTGES3P5	ENSG00000234544	204380	AL353740.1	ENSG00000203434	36949	None	None
L1FLnI_10q25.1u	L1	L1	L1FLnI	chr10	108528979	108538368	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTGES3P5	ENSG00000234544	232447	AL353740.1	ENSG00000203434	9607	chr10:108538103-108538459	None
L1FLnI_10q25.1v	L1	L1	L1FLnI	chr10	108946193	108955197	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP278	ENSG00000222436	4883	RNU5B-6P	ENSG00000252574	229737	None	None
L1FLnI_10q25.1w	L1	L1	L1FLnI	chr10	108989769	108998871	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP278	ENSG00000222436	48459	RNU5B-6P	ENSG00000252574	186063	None	None
L1FLnI_10q25.1x	L1	L1	L1FLnI	chr10	108989769	108998883	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP278	ENSG00000222436	48459	RNU5B-6P	ENSG00000252574	186051	None	None
L1FLnI_10q25.1y	L1	L1	L1FLnI	chr10	109127916	109138059	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP278	ENSG00000222436	186606	RNU5B-6P	ENSG00000252574	46875	None	None
L1FLnI_10q25.1z	L1	L1	L1FLnI	chr10	109220123	109230135	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU5B-6P	ENSG00000252574	35122	RNU6-839P	ENSG00000200217	9504	None	None
L1FLnI_10q25.1aa	L1	L1	L1FLnI	chr10	109363771	109373905	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-839P	ENSG00000200217	124025	PHB2P1	ENSG00000232728	154214	None	None
L1FLnI_10q25.1ba	L1	L1	L1FLnI	chr10	109389686	109399822	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-839P	ENSG00000200217	149940	PHB2P1	ENSG00000232728	128297	None	None
L1FLnI_10q25.1ca	L1	L1	L1FLnI	chr10	109536123	109546534	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390123.1	ENSG00000270333	115280	BTF3P15	ENSG00000237242	1133	None	None
L1FLnI_10q25.1da	L1	L1	L1FLnI	chr10	109542799	109552954	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	BTF3P15	ENSG00000237242	7809	AL390123.1	ENSG00000270333	108860	None	None
L1FLnI_10q25.1ea	L1	L1	L1FLnI	chr10	109602040	109611474	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	BTF3P15	ENSG00000237242	67050	AL390123.1	ENSG00000270333	50340	None	None
L1FLnI_10q25.1fa	L1	L1	L1FLnI	chr10	109648859	109658973	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	BTF3P15	ENSG00000237242	113869	AL390123.1	ENSG00000270333	2841	None	None
L1FLnI_10q25.1ga	L1	L1	L1FLnI	chr10	109681062	109691214	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL21P91	ENSG00000224907	116437	XIAPP1	ENSG00000270294	21	None	None
L1FLnI_10q25.1ha	L1	L1	L1FLnI	chr10	109795027	109805044	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL21P91	ENSG00000224907	2607	XIAPP1	ENSG00000270294	113986	None	None
L1FLI_10q25.1b	L1	L1	L1FLI	chr10	109811409	109819459	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	XPNPEP1	ENSG00000108039	45307	RPL21P91	ENSG00000224907	3280	None	None
L1FLnI_10q25.1ia	L1	L1	L1FLnI	chr10	109822319	109832346	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL21P91	ENSG00000224907	14190	XPNPEP1	ENSG00000108039	32420	None	None
L1FLnI_10q25.2a	L1	L1	L1FLnI	chr10	111039642	111049781	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SHOC2	ENSG00000108061	25975	ADRA2A	ENSG00000150594	27248	None	None
L1FLnI_10q25.2b	L1	L1	L1FLnI	chr10	111580429	111590448	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS6P15	ENSG00000230809	81488	AL136119.1	ENSG00000287231	196785	None	None
L1FLnI_10q25.2c	L1	L1	L1FLnI	chr10	111633610	111643742	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS6P15	ENSG00000230809	134669	AL136119.1	ENSG00000287231	143491	None	None
L1FLnI_10q25.2d	L1	L1	L1FLnI	chr10	111810309	111820330	+	coding	AL136119.1	lncRNA	ANTISENSE	ENSG00000287231	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q25.2e	L1	L1	L1FLnI	chr10	112058893	112068916	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL136119.1	ENSG00000287231	68984	GPAM	ENSG00000119927	80949	None	None
L1FLnI_10q25.2f	L1	L1	L1FLnI	chr10	112058893	112068902	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL136119.1	ENSG00000287231	68984	GPAM	ENSG00000119927	80963	None	None
L1FLnI_10q25.2g	L1	L1	L1FLnI	chr10	112100427	112110461	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL136119.1	ENSG00000287231	110518	GPAM	ENSG00000119927	39404	None	None
L1FLnI_10q25.2h	L1	L1	L1FLnI	chr10	112100427	112110489	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL136119.1	ENSG00000287231	110518	GPAM	ENSG00000119927	39376	None	None
L1FLnI_10q25.2i	L1	L1	L1FLnI	chr10	112247401	112257561	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GPAM	ENSG00000119927	32024	TECTB	ENSG00000119913	25839	None	None
L1FLnI_10q25.3a	L1	L1	L1FLnI	chr10	113197230	113206157	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TCF7L2	ENSG00000148737	29552	RNU7-165P	ENSG00000238380	147268	None	None
L1FLnI_10q25.3b	L1	L1	L1FLnI	chr10	113668510	113678064	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NRAP	ENSG00000197893	4383	CASP7	ENSG00000165806	1098	None	None
L1FLnI_10q25.3c	L1	L1	L1FLnI	chr10	113687768	113696627	-	noncoding	CASP7	protein_coding	ANTISENSE	ENSG00000165806	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q25.3d	L1	L1	L1FLnI	chr10	115253100	115263251	-	coding	ATRNL1	protein_coding	ANTISENSE	ENSG00000107518	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr10:115262182-115262190	None
L1FLnI_10q25.3e	L1	L1	L1FLnI	chr10	115315492	115324803	-	noncoding	ATRNL1	protein_coding	ANTISENSE	ENSG00000107518	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q25.3f	L1	L1	L1FLnI	chr10	115361838	115372043	-	coding	ATRNL1	protein_coding	ANTISENSE	ENSG00000107518	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q25.3g	L1	L1	L1FLnI	chr10	115485245	115495700	-	noncoding	ATRNL1	protein_coding	ANTISENSE	ENSG00000107518	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q25.3h	L1	L1	L1FLnI	chr10	115530129	115540262	-	noncoding	ATRNL1	protein_coding	ANTISENSE	ENSG00000107518	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q25.3i	L1	L1	L1FLnI	chr10	115575160	115585012	-	coding	ATRNL1	protein_coding	ANTISENSE	ENSG00000107518	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q25.3j	L1	L1	L1FLnI	chr10	115581248	115591285	-	coding	ATRNL1	protein_coding	ANTISENSE	ENSG00000107518	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q25.3k	L1	L1	L1FLnI	chr10	115752684	115762355	-	coding	ATRNL1	protein_coding	ANTISENSE	ENSG00000107518	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q25.3l	L1	L1	L1FLnI	chr10	116932672	116943111	-	coding	SHTN1	protein_coding	SENSE	ENSG00000187164	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr10:116940575-116940592
L1FLnI_10q25.3m	L1	L1	L1FLnI	chr10	117078540	117088563	-	coding	SHTN1	protein_coding	SENSE	ENSG00000187164	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q26.11a	L1	L1	L1FLnI	chr10	117832389	117842387	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RAB11FIP2	ENSG00000107560	162529	AL513324.1	ENSG00000263041	1145	None	None
L1FLnI_10q26.11b	L1	L1	L1FLnI	chr10	118645832	118656242	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CACUL1	ENSG00000151893	17925	TOMM22P5	ENSG00000225155	1634	None	None
L1FLnI_10q26.11c	L1	L1	L1FLnI	chr10	118652557	118663071	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CACUL1	ENSG00000151893	11096	TOMM22P5	ENSG00000225155	8359	None	None
L1FLnI_10q26.11d	L1	L1	L1FLnI	chr10	118654324	118663071	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CACUL1	ENSG00000151893	11096	TOMM22P5	ENSG00000225155	10126	None	None
L1FLnI_10q26.12a	L1	L1	L1FLnI	chr10	120233779	120243825	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL21P16	ENSG00000220842	110876	AL355298.1	ENSG00000223455	163620	None	None
L1FLnI_10q26.12b	L1	L1	L1FLnI	chr10	120233801	120243825	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL21P16	ENSG00000220842	110876	AL355298.1	ENSG00000223455	163642	None	None
L1FLnI_10q26.12c	L1	L1	L1FLnI	chr10	120343976	120352571	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355298.1	ENSG00000223455	273817	RPL21P16	ENSG00000220842	2130	None	None
L1FLnI_10q26.12d	L1	L1	L1FLnI	chr10	120441570	120451714	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073587.1	ENSG00000234522	1194	PLPP4	ENSG00000203805	5513	None	None
L1FLnI_10q26.12e	L1	L1	L1FLnI	chr10	120667966	120677812	+	noncoding	AC023282.1	lncRNA	SENSE	ENSG00000274461	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q26.12f	L1	L1	L1FLnI	chr10	120667966	120677799	+	noncoding	AC023282.1	lncRNA	SENSE	ENSG00000274461	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q26.12g	L1	L1	L1FLnI	chr10	120907461	120917480	+	coding	WDR11	protein_coding	SENSE	ENSG00000120008	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q26.13a	L1	L1	L1FLnI	chr10	122863742	122873446	+	noncoding	AC073585.2,FAM24B	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000286088,ENSG00000213185	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q26.13b	L1	L1	L1FLnI	chr10	122897412	122907013	+	noncoding	AC073585.1	transcribed_processed_pseudogene	SENSE	ENSG00000255624	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q26.13c	L1	L1	L1FLnI	chr10	122918392	122928260	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM24A	ENSG00000203795	5281	C10orf88	ENSG00000119965	2641	None	None
L1FLnI_10q26.13d	L1	L1	L1FLnI	chr10	122918392	122927389	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM24A	ENSG00000203795	5281	C10orf88	ENSG00000119965	3512	None	None
L1FLnI_10q26.13e	L1	L1	L1FLnI	chr10	124187437	124197463	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OAT	ENSG00000065154	199840	CHST15	ENSG00000182022	93839	None	chr10:124197381-124197388
L1FLnI_10q26.13f	L1	L1	L1FLnI	chr10	124187455	124197463	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OAT	ENSG00000065154	199840	CHST15	ENSG00000182022	93857	None	chr10:124197381-124197388
L1FLnI_10q26.13g	L1	L1	L1FLnI	chr10	125178488	125188621	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS27P18	ENSG00000233135	285065	MRPS21P6	ENSG00000214298	11551	None	None
L1FLnI_10q26.13h	L1	L1	L1FLnI	chr10	125612783	125622113	-	coding	TEX36	protein_coding	SENSE	ENSG00000175018	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q26.13i	L1	L1	L1FLnI	chr10	125612786	125622113	-	coding	TEX36	protein_coding	SENSE	ENSG00000175018	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q26.13j	L1	L1	L1FLnI	chr10	125644053	125654149	+	coding	TEX36	protein_coding	ANTISENSE	ENSG00000175018	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q26.2a	L1	L1	L1FLnI	chr10	125941739	125951750	+	coding	FANK1	protein_coding	SENSE	ENSG00000203780	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q26.2b	L1	L1	L1FLnI	chr10	126342547	126351074	-	coding	ADAM12	protein_coding	SENSE	ENSG00000148848	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q26.2c	L1	L1	L1FLnI	chr10	126435550	126446663	+	noncoding	C10orf90,AL589787.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000154493,ENSG00000287326	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q26.2d	L1	L1	L1FLnI	chr10	126584409	126594209	+	coding	C10orf90	protein_coding	ANTISENSE	ENSG00000154493	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q26.2e	L1	L1	L1FLnI	chr10	126672973	126682971	+	coding	C10orf90	protein_coding	ANTISENSE	ENSG00000154493	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q26.2f	L1	L1	L1FLnI	chr10	126672973	126682958	+	coding	C10orf90	protein_coding	ANTISENSE	ENSG00000154493	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q26.2g	L1	L1	L1FLnI	chr10	126749425	126759919	-	noncoding	C10orf90	protein_coding	SENSE	ENSG00000154493	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q26.2h	L1	L1	L1FLnI	chr10	126751130	126759919	-	noncoding	C10orf90	protein_coding	SENSE	ENSG00000154493	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q26.2i	L1	L1	L1FLnI	chr10	126760558	126770991	-	noncoding	C10orf90	protein_coding	SENSE	ENSG00000154493	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q26.2j	L1	L1	L1FLnI	chr10	126786526	126795341	+	noncoding	C10orf90	protein_coding	ANTISENSE	ENSG00000154493	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q26.2k	L1	L1	L1FLnI	chr10	126786660	126795341	+	noncoding	C10orf90	protein_coding	ANTISENSE	ENSG00000154493	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q26.2l	L1	L1	L1FLnI	chr10	126878369	126888393	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	C10orf90	ENSG00000154493	79661	DOCK1	ENSG00000150760	17016	None	None
L1FLnI_10q26.2m	L1	L1	L1FLnI	chr10	127703564	127712646	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NPS	ENSG00000214285	150925	AL391005.1	ENSG00000279725	21916	None	None
L1FLnI_10q26.2n	L1	L1	L1FLnI	chr10	127716436	127728105	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPS	ENSG00000214285	163797	AL391005.1	ENSG00000279725	6457	None	None
L1FLnI_10q26.2o	L1	L1	L1FLnI	chr10	128223077	128233210	-	coding	LINC01163	lncRNA	ANTISENSE	ENSG00000280953	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q26.3a	L1	L1	L1FLnI	chr10	129732062	129742080	-	coding	MGMT	protein_coding	ANTISENSE	ENSG00000170430	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q26.3b	L1	L1	L1FLnI	chr10	129990396	129999801	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EBF3	ENSG00000108001	26555	C10orf143	ENSG00000237489	20224	None	None
L1FLnI_10q26.3c	L1	L1	L1FLnI	chr10	131504078	131514218	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01164	ENSG00000189275	258180	TCERG1L	ENSG00000176769	192357	None	None
L1FLnI_10q26.3d	L1	L1	L1FLnI	chr10	132087212	132097374	-	coding	JAKMIP3	protein_coding	ANTISENSE	ENSG00000188385	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q26.3e	L1	L1	L1FLnI	chr10	133142627	133151249	+	noncoding	RPL5P28	processed_pseudogene	ANTISENSE	ENSG00000235264	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_10q26.3f	L1	L1	L1FLnI	chr10	133577057	133587207	+	coding	AL731769.2	lncRNA	SENSE	ENSG00000288107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.5a	L1	L1	L1FLnI	chr11	73348	83769	+	noncoding	WBP1LP10	unprocessed_pseudogene	SENSE	ENSG00000253826	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.5b	L1	L1	L1FLnI	chr11	2633676	2643855	-	coding	KCNQ1,KCNQ1OT1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000053918,ENSG00000269821	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr11:2633794-2634150	None
L1FLnI_11p15.4a	L1	L1	L1FLnI	chr11	3264657	3274407	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFA5P8	ENSG00000236987	1638	AC109309.1	ENSG00000224513	31819	None	None
L1FLnI_11p15.4b	L1	L1	L1FLnI	chr11	3310485	3320227	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDUFA5P1	ENSG00000232390	1635	AC109309.2	ENSG00000276951	20843	None	None
L1FLnI_11p15.4c	L1	L1	L1FLnI	chr11	3492458	3502551	-	coding	AC127526.3,AC127526.1,AC127526.2	transcribed_unprocessed_pseudogene,lncRNA,lncRNA	SENSE,ANTISENSE,SENSE	ENSG00000284605,ENSG00000254757,ENSG00000255367	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.4d	L1	L1	L1FLnI	chr11	3996091	4006242	+	coding	STIM1	protein_coding	SENSE	ENSG00000167323	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.4e	L1	L1	L1FLnI	chr11	4169754	4179776	-	coding	LINC02749	lncRNA	ANTISENSE	ENSG00000254480	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr11:4179644-4179654,chr11:4179669-4179679
L1FLnI_11p15.4f	L1	L1	L1FLnI	chr11	4260130	4269009	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SSU72P2	ENSG00000284306	17490	SSU72P6	ENSG00000236175	9696	None	None
L1FLnI_11p15.4g	L1	L1	L1FLnI	chr11	4297775	4306651	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SSU72P3	ENSG00000284546	23214	SSU72P4	ENSG00000283873	9692	None	None
L1FLnI_11p15.4h	L1	L1	L1FLnI	chr11	4348965	4357840	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR52B4	ENSG00000221996	9423	SSU72P7	ENSG00000284438	9721	None	None
L1FLnI_11p15.4i	L1	L1	L1FLnI	chr11	4400326	4410440	-	coding	OR52K3P	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000225101	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.4j	L1	L1	L1FLnI	chr11	4555630	4565936	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR52M1	ENSG00000197790	9486	C11orf40	ENSG00000171987	5487	chr11:4562528-4562543	None
L1FLnI_11p15.4k	L1	L1	L1FLnI	chr11	4850599	4859776	+	coding	MMP26,OR51H1	protein_coding,transcribed_unprocessed_pseudogene	SENSE,ANTISENSE	ENSG00000167346,ENSG00000176904	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.4l	L1	L1	L1FLnI	chr11	5020181	5029839	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR51P1P	ENSG00000224300	4102	OR52J2P	ENSG00000230261	7174	None	None
L1FLnI_11p15.4m	L1	L1	L1FLnI	chr11	5215509	5225633	-	coding	AC104389.7,AC104389.1,HBB	TEC,ribozyme,protein_coding	SENSE,SENSE,SENSE	ENSG00000285498,ENSG00000221031,ENSG00000244734	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr11:5225461-5225472,chr11:5225485-5225496,chr11:5225512-5225525,chr11:5225526-5225541,chr11:5225544-5225549,chr11:5225581-5225601,chr11:5225615-5225629,chr11:5225633-5225651,chr11:5225503-5225531,chr11:5225535-5225536,chr11:5225542-5225557,chr11:5225563-5225573,chr11:5225579-5225588,chr11:5225592-5225641
L1FLnI_11p15.4n	L1	L1	L1FLnI	chr11	5352406	5361651	+	coding	HBG2,AC104389.5,HBE1,OR51B5,OR51B6,AC104389.3	protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,processed_pseudogene	ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,SENSE,SENSE	ENSG00000196565,ENSG00000239920,ENSG00000213931,ENSG00000167355,ENSG00000176239,ENSG00000230087	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.4o	L1	L1	L1FLnI	chr11	5369847	5379972	+	noncoding	HBG2,AC104389.5,HBE1,OR51B5	protein_coding,protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000196565,ENSG00000239920,ENSG00000213931,ENSG00000167355	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.4p	L1	L1	L1FLnI	chr11	5369847	5380000	+	noncoding	HBG2,AC104389.5,HBE1,OR51B5	protein_coding,protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000196565,ENSG00000239920,ENSG00000213931,ENSG00000167355	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.4q	L1	L1	L1FLnI	chr11	5408804	5418916	+	coding	HBG2,AC104389.5,HBE1,OR51B5	protein_coding,protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000196565,ENSG00000239920,ENSG00000213931,ENSG00000167355	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.4r	L1	L1	L1FLnI	chr11	5474000	5484020	+	coding	HBG2,AC104389.5,HBE1,OR51B5	protein_coding,protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000196565,ENSG00000239920,ENSG00000213931,ENSG00000167355	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:5483563-5483835	None
L1FLnI_11p15.4s	L1	L1	L1FLnI	chr11	5474000	5484037	+	coding	HBG2,AC104389.5,HBE1,OR51B5	protein_coding,protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000196565,ENSG00000239920,ENSG00000213931,ENSG00000167355	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:5483563-5483835	None
L1FLnI_11p15.4t	L1	L1	L1FLnI	chr11	5976212	5986588	-	coding	OR52L1	protein_coding	SENSE	ENSG00000183313	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.4u	L1	L1	L1FLnI	chr11	6140159	6149954	+	coding	AC022762.1	lncRNA	ANTISENSE	ENSG00000254444	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.4v	L1	L1	L1FLnI	chr11	6181852	6191866	+	coding	AC022762.1	lncRNA	ANTISENSE	ENSG00000254444	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.4w	L1	L1	L1FLnI	chr11	6901090	6911221	+	coding	AC087280.2	lncRNA	ANTISENSE	ENSG00000283415	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.4x	L1	L1	L1FLnI	chr11	7334815	7344733	-	noncoding	SYT9	protein_coding	ANTISENSE	ENSG00000170743	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.4y	L1	L1	L1FLnI	chr11	7657650	7667671	-	coding	CYB5R2	protein_coding	SENSE	ENSG00000166394	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr11:7666447-7666450
L1FLnI_11p15.4z	L1	L1	L1FLnI	chr11	7731001	7740982	+	coding	AC044810.3	lncRNA	ANTISENSE	ENSG00000271758	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.4aa	L1	L1	L1FLnI	chr11	7857536	7867570	+	coding	AC044810.3,AC044810.2	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000271758,ENSG00000254951	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.4ba	L1	L1	L1FLnI	chr11	8392998	8403126	+	coding	STK33	protein_coding	ANTISENSE	ENSG00000130413	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.4ca	L1	L1	L1FLnI	chr11	8486450	8496603	+	coding	STK33	protein_coding	ANTISENSE	ENSG00000130413	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.4da	L1	L1	L1FLnI	chr11	8512881	8522968	+	coding	STK33	protein_coding	ANTISENSE	ENSG00000130413	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.4ea	L1	L1	L1FLnI	chr11	8885769	8895901	+	coding	DENND2B	protein_coding	ANTISENSE	ENSG00000166444	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.4fa	L1	L1	L1FLnI	chr11	9539835	9549863	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	WEE1	ENSG00000166483	23807	ZNF143	ENSG00000166478	11311	None	None
L1FLnI_11p15.4ga	L1	L1	L1FLnI	chr11	10169649	10179853	+	coding	SBF2	protein_coding	ANTISENSE	ENSG00000133812	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.4ha	L1	L1	L1FLnI	chr11	10225834	10235954	-	coding	SBF2	protein_coding	SENSE	ENSG00000133812	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.4ia	L1	L1	L1FLnI	chr11	10336128	10346668	+	noncoding	AMPD3	protein_coding	SENSE	ENSG00000133805	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.4ja	L1	L1	L1FLnI	chr11	10336128	10345281	+	noncoding	AMPD3	protein_coding	SENSE	ENSG00000133805	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.4ka	L1	L1	L1FLnI	chr11	10419715	10430036	-	noncoding	AMPD3	protein_coding	ANTISENSE	ENSG00000133805	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.4la	L1	L1	L1FLnI	chr11	10945858	10956222	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02752	ENSG00000254401	64661	ZBED5-AS1	ENSG00000247271	36886	None	None
L1FLnI_11p15.4ma	L1	L1	L1FLnI	chr11	11123609	11132734	-	noncoding	LINC02752	lncRNA	ANTISENSE	ENSG00000254401	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.3a	L1	L1	L1FLnI	chr11	11710797	11720931	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC131935.2	ENSG00000280288	4401	MIR4299	ENSG00000266645	54075	None	None
L1FLnI_11p15.3b	L1	L1	L1FLnI	chr11	11710808	11720931	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC131935.2	ENSG00000280288	4401	MIR4299	ENSG00000266645	54086	None	None
L1FLnI_11p15.3c	L1	L1	L1FLnI	chr11	11881734	11891649	+	noncoding	USP47	protein_coding	SENSE	ENSG00000170242	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.3d	L1	L1	L1FLnI	chr11	12030045	12039987	+	noncoding	LINC02547	lncRNA	SENSE	ENSG00000254486	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr11:12039770-12039776
L1FLnI_11p15.3e	L1	L1	L1FLnI	chr11	12333955	12343473	-	coding	MICAL2	protein_coding	ANTISENSE	ENSG00000133816	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.3f	L1	L1	L1FLnI	chr11	12362468	12372597	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MICAL2	ENSG00000133816	3324	PARVA	ENSG00000197702	4966	None	None
L1FLnI_11p15.3g	L1	L1	L1FLnI	chr11	12606238	12616808	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009806.1	ENSG00000254847	65271	AC107881.1	ENSG00000286521	2518	None	None
L1FLnI_11p15.3h	L1	L1	L1FLnI	chr11	13394047	13404193	-	coding	BTBD10	protein_coding	SENSE	ENSG00000148925	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.3i	L1	L1	L1FLnI	chr11	13528219	13538622	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN2P36	ENSG00000228901	71741	PTH	ENSG00000152266	32038	None	None
L1FLnI_11p15.3j	L1	L1	L1FLnI	chr11	13554459	13564475	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN2P36	ENSG00000228901	45888	PTH	ENSG00000152266	58278	None	None
L1FLnI_11p15.3k	L1	L1	L1FLnI	chr11	13566352	13576421	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PTH	ENSG00000152266	70171	HMGN2P36	ENSG00000228901	33942	None	None
L1FLnI_11p15.3l	L1	L1	L1FLnI	chr11	13580502	13589234	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTH	ENSG00000152266	84321	HMGN2P36	ENSG00000228901	21129	None	None
L1FLnI_11p15.3m	L1	L1	L1FLnI	chr11	13622520	13632731	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	FAR1	ENSG00000197601	35937	HMGN2P36	ENSG00000228901	11749	None	None
L1FLnI_11p15.3n	L1	L1	L1FLnI	chr11	13647755	13657906	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN2P36	ENSG00000228901	36984	FAR1	ENSG00000197601	10762	None	None
L1FLnI_11p15.3o	L1	L1	L1FLnI	chr11	13793302	13802746	-	coding	LINC02548	lncRNA	ANTISENSE	ENSG00000255411	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.3p	L1	L1	L1FLnI	chr11	13793328	13802746	-	coding	LINC02548	lncRNA	ANTISENSE	ENSG00000255411	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.2a	L1	L1	L1FLnI	chr11	13819513	13828266	-	coding	LINC02548,AC027779.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000255411,ENSG00000254927	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.2b	L1	L1	L1FLnI	chr11	13985873	13996517	-	coding	SPON1	protein_coding	ANTISENSE	ENSG00000262655	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.2c	L1	L1	L1FLnI	chr11	14083657	14093873	-	coding	SPON1	protein_coding	ANTISENSE	ENSG00000262655	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.2d	L1	L1	L1FLnI	chr11	14168001	14177464	-	coding	SPON1	protein_coding	ANTISENSE	ENSG00000262655	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.2e	L1	L1	L1FLnI	chr11	14426306	14435588	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RRAS2	ENSG00000133818	61800	AC018523.1	ENSG00000255074	5199	None	None
L1FLnI_11p15.2f	L1	L1	L1FLnI	chr11	14594262	14604376	-	coding	PSMA1	protein_coding	SENSE	ENSG00000129084	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.2g	L1	L1	L1FLnI	chr11	14627668	14637660	-	coding	PSMA1	protein_coding	SENSE	ENSG00000129084	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.2h	L1	L1	L1FLnI	chr11	14657817	14667947	+	coding	PDE3B	protein_coding	SENSE	ENSG00000152270	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.2i	L1	L1	L1FLnI	chr11	14712410	14722438	+	coding	PDE3B	protein_coding	SENSE	ENSG00000152270	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr11:14712492-14712495
L1FLnI_11p15.2j	L1	L1	L1FLnI	chr11	14737120	14747523	-	coding	PDE3B	protein_coding	ANTISENSE	ENSG00000152270	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.2k	L1	L1	L1FLnI	chr11	14774177	14784273	+	noncoding	PDE3B	protein_coding	SENSE	ENSG00000152270	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr11:14776779-14776800
L1FLnI_11p15.2l	L1	L1	L1FLnI	chr11	14820675	14829823	+	noncoding	PDE3B	protein_coding	SENSE	ENSG00000152270	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.2m	L1	L1	L1FLnI	chr11	14840853	14850998	+	coding	PDE3B	protein_coding	SENSE	ENSG00000152270	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.2n	L1	L1	L1FLnI	chr11	14990020	14998820	+	coding	CALCB	protein_coding	SENSE	ENSG00000175868	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.2o	L1	L1	L1FLnI	chr11	16137890	16148013	+	coding	SOX6	protein_coding	ANTISENSE	ENSG00000110693	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:16139642-16140003	None
L1FLnI_11p15.2p	L1	L1	L1FLnI	chr11	16249865	16259320	+	noncoding	SOX6	protein_coding	ANTISENSE	ENSG00000110693	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.2q	L1	L1	L1FLnI	chr11	16492834	16502971	+	coding	SOX6	protein_coding	ANTISENSE	ENSG00000110693	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.2r	L1	L1	L1FLnI	chr11	16516991	16527142	+	coding	SOX6	protein_coding	ANTISENSE	ENSG00000110693	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.2s	L1	L1	L1FLnI	chr11	16532835	16542973	+	coding	SOX6	protein_coding	ANTISENSE	ENSG00000110693	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.2t	L1	L1	L1FLnI	chr11	16628151	16636677	-	noncoding	SOX6,C11orf58	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000110693,ENSG00000110696	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.2u	L1	L1	L1FLnI	chr11	16637415	16647548	-	coding	SOX6,C11orf58	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000110693,ENSG00000110696	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.2v	L1	L1	L1FLnI	chr11	16645154	16654276	+	noncoding	SOX6,C11orf58	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000110693,ENSG00000110696	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.2w	L1	L1	L1FLnI	chr11	16724483	16734239	+	noncoding	SOX6,C11orf58	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000110693,ENSG00000110696	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.1a	L1	L1	L1FLnI	chr11	17027992	17038155	-	coding	OR7E14P	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000184669	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.1b	L1	L1	L1FLnI	chr11	18154293	18164440	+	coding	AC090099.1	lncRNA	ANTISENSE	ENSG00000255470	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.1c	L1	L1	L1FLnI	chr11	18655299	18665412	+	coding	AP006296.1	processed_pseudogene	SENSE	ENSG00000257043	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.1d	L1	L1	L1FLnI	chr11	18833843	18844527	+	noncoding	MRGPRX8P	processed_pseudogene	SENSE	ENSG00000276789	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.1e	L1	L1	L1FLnI	chr11	18891423	18901498	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRGPRX5P	ENSG00000255536	8938	MRGPRX6P	ENSG00000254541	3503	None	chr11:18891606-18891610,chr11:18891631-18891643
L1FLnI_11p15.1f	L1	L1	L1FLnI	chr11	18917297	18927873	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRGPRX5P	ENSG00000255536	5901	MRGPRX1	ENSG00000170255	5940	None	None
L1FLnI_11p15.1g	L1	L1	L1FLnI	chr11	18939444	18949153	+	noncoding	MRGPRX1,AC023078.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000170255,ENSG00000255244	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr11:18939493-18939526
L1FLnI_11p15.1h	L1	L1	L1FLnI	chr11	18988243	18997512	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRGPRX9P	ENSG00000255424	32185	MRGPRX10P	ENSG00000254720	15540	None	None
L1FLnI_11p15.1i	L1	L1	L1FLnI	chr11	18994601	19004257	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRGPRX9P	ENSG00000255424	25440	MRGPRX10P	ENSG00000254720	21898	None	None
L1FLnI_11p15.1j	L1	L1	L1FLnI	chr11	19007096	19015896	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRGPRX9P	ENSG00000255424	13801	MRGPRX10P	ENSG00000254720	34393	None	None
L1FLnI_11p15.1k	L1	L1	L1FLnI	chr11	19036215	19046637	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MRGPRX9P	ENSG00000255424	5777	MRGPRX2	ENSG00000183695	7818	None	None
L1FLnI_11p15.1l	L1	L1	L1FLnI	chr11	19131562	19141579	+	coding	ZDHHC13	protein_coding	SENSE	ENSG00000177054	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.1m	L1	L1	L1FLnI	chr11	19408621	19418634	+	noncoding	NAV2	protein_coding	SENSE	ENSG00000166833	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.1n	L1	L1	L1FLnI	chr11	19580873	19591019	-	noncoding	NAV2	protein_coding	ANTISENSE	ENSG00000166833	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.1o	L1	L1	L1FLnI	chr11	19618408	19628393	-	coding	NAV2	protein_coding	ANTISENSE	ENSG00000166833	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.1p	L1	L1	L1FLnI	chr11	20338880	20349268	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DBX1	ENSG00000109851	178405	HTATIP2	ENSG00000109854	14417	None	chr11:20340754-20340759
L1FLnI_11p15.1q	L1	L1	L1FLnI	chr11	20688787	20697771	-	coding	NELL1	protein_coding	ANTISENSE	ENSG00000165973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.1r	L1	L1	L1FLnI	chr11	21199149	21209216	-	coding	NELL1	protein_coding	ANTISENSE	ENSG00000165973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.1s	L1	L1	L1FLnI	chr11	21268424	21278561	+	coding	NELL1	protein_coding	SENSE	ENSG00000165973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.1t	L1	L1	L1FLnI	chr11	21358218	21367125	-	noncoding	NELL1	protein_coding	ANTISENSE	ENSG00000165973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.1u	L1	L1	L1FLnI	chr11	21358258	21367125	-	noncoding	NELL1	protein_coding	ANTISENSE	ENSG00000165973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.1v	L1	L1	L1FLnI	chr11	21481320	21491625	+	noncoding	NELL1	protein_coding	SENSE	ENSG00000165973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.1w	L1	L1	L1FLnI	chr11	21668550	21678569	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC130307.1	ENSG00000287753	104090	NELL1	ENSG00000165973	92864	None	None
L1FLnI_11p15.1x	L1	L1	L1FLnI	chr11	21948369	21960157	+	noncoding	ANO5	protein_coding	SENSE	ENSG00000171714	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p15.1y	L1	L1	L1FLnI	chr11	21995347	22004592	-	coding	ANO5	protein_coding	ANTISENSE	ENSG00000171714	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.3a	L1	L1	L1FLnI	chr11	22015504	22025521	-	coding	ANO5,AC116534.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000171714,ENSG00000287962	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.3b	L1	L1	L1FLnI	chr11	22021491	22031595	+	coding	ANO5,AC116534.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000171714,ENSG00000287962	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.3c	L1	L1	L1FLnI	chr11	22049606	22060135	-	noncoding	ANO5,AC116534.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000171714,ENSG00000287962	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.3d	L1	L1	L1FLnI	chr11	22050507	22059436	-	noncoding	ANO5,AC116534.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000171714,ENSG00000287962	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.3e	L1	L1	L1FLnI	chr11	22281309	22291288	+	coding	ANO5,AC104009.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000171714,ENSG00000254768	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.3f	L1	L1	L1FLnI	chr11	22522680	22532712	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	FANCF	ENSG00000183161	89821	AC055878.1	ENSG00000255357	12284	None	None
L1FLnI_11p14.3g	L1	L1	L1FLnI	chr11	22522692	22532712	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	FANCF	ENSG00000183161	89821	AC055878.1	ENSG00000255357	12296	None	None
L1FLnI_11p14.3h	L1	L1	L1FLnI	chr11	22612290	22621284	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FANCF	ENSG00000183161	1249	AC055878.1	ENSG00000255357	101894	None	None
L1FLnI_11p14.3i	L1	L1	L1FLnI	chr11	22646427	22656445	-	coding	GAS2	protein_coding	ANTISENSE	ENSG00000148935	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.3j	L1	L1	L1FLnI	chr11	22849381	22858130	+	noncoding	AC006299.1,CCDC179	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000246225,ENSG00000255359	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.3k	L1	L1	L1FLnI	chr11	22967708	22978193	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02718	ENSG00000255418	176490	AC006299.1	ENSG00000246225	22315	None	None
L1FLnI_11p14.3l	L1	L1	L1FLnI	chr11	22967721	22978193	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02718	ENSG00000255418	176490	AC006299.1	ENSG00000246225	22328	None	None
L1FLnI_11p14.3m	L1	L1	L1FLnI	chr11	23027619	23037638	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02718	ENSG00000255418	117045	AC006299.1	ENSG00000246225	82226	None	None
L1FLnI_11p14.3n	L1	L1	L1FLnI	chr11	23128372	23140275	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02718	ENSG00000255418	14408	AC006299.1	ENSG00000246225	182979	None	None
L1FLnI_11p14.3o	L1	L1	L1FLnI	chr11	23297658	23307691	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC100767.2	ENSG00000271491	62425	LINC02718	ENSG00000255418	94497	None	None
L1FLnI_11p14.3p	L1	L1	L1FLnI	chr11	23317489	23327630	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02718	ENSG00000255418	114328	AC100767.2	ENSG00000271491	42486	None	None
L1FLnI_11p14.3q	L1	L1	L1FLnI	chr11	23480219	23490685	+	noncoding	THAP12P4	processed_pseudogene	SENSE	ENSG00000254465	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.3r	L1	L1	L1FLnI	chr11	23728096	23738545	+	coding	LINC02726	lncRNA	SENSE	ENSG00000255193	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.3s	L1	L1	L1FLnI	chr11	23916071	23924995	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02686	ENSG00000254594	310482	AC099842.1	ENSG00000277803	22514	None	None
L1FLnI_11p14.3t	L1	L1	L1FLnI	chr11	24097039	24106268	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099842.1	ENSG00000277803	203482	LINC02686	ENSG00000254594	129209	None	None
L1FLnI_11p14.3u	L1	L1	L1FLnI	chr11	24151357	24160518	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099842.1	ENSG00000277803	257800	LINC02686	ENSG00000254594	74959	None	None
L1FLnI_11p14.3v	L1	L1	L1FLnI	chr11	24213615	24223757	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC099842.1	ENSG00000277803	320058	LINC02686	ENSG00000254594	11720	None	None
L1FLnI_11p14.3w	L1	L1	L1FLnI	chr11	24278780	24287521	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02686	ENSG00000254594	16562	AC067902.1	ENSG00000207252	168390	None	None
L1FLI_11p14.3	L1	L1	L1FLI	chr11	24326950	24334995	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02686	ENSG00000254594	64732	AC067902.1	ENSG00000207252	120916	None	None
L1FLnI_11p14.3x	L1	L1	L1FLnI	chr11	24957256	24967417	-	coding	LUZP2	protein_coding	ANTISENSE	ENSG00000187398	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.3y	L1	L1	L1FLnI	chr11	25032930	25043258	-	noncoding	LUZP2	protein_coding	ANTISENSE	ENSG00000187398	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.3z	L1	L1	L1FLnI	chr11	25140921	25150340	-	coding	AC087373.1	processed_pseudogene	SENSE	ENSG00000255368	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.3aa	L1	L1	L1FLnI	chr11	25274827	25284973	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL36AP40	ENSG00000240298	303502	AC087373.1	ENSG00000255368	133804	None	None
L1FLnI_11p14.3ba	L1	L1	L1FLnI	chr11	25421634	25431658	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC087373.1	ENSG00000255368	280611	RPL36AP40	ENSG00000240298	156817	None	None
L1FLnI_11p14.3ca	L1	L1	L1FLnI	chr11	25495628	25505639	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL36AP40	ENSG00000240298	82836	AC087373.1	ENSG00000255368	354605	None	None
L1FLnI_11p14.3da	L1	L1	L1FLnI	chr11	25604430	25612997	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC100770.1	ENSG00000255454	17723	RPL36AP40	ENSG00000240298	15635	None	None
L1FLnI_11p14.3ea	L1	L1	L1FLnI	chr11	25643294	25653286	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02699	ENSG00000254456	81471	AC100770.1	ENSG00000255454	12253	None	None
L1FLnI_11p14.3fa	L1	L1	L1FLnI	chr11	25718617	25728396	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02699	ENSG00000254456	6361	AC100770.1	ENSG00000255454	87576	None	None
L1FLnI_11p14.3ga	L1	L1	L1FLnI	chr11	25754554	25764954	+	noncoding	LINC02699	lncRNA	SENSE	ENSG00000254456	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.3ha	L1	L1	L1FLnI	chr11	25776962	25785468	+	noncoding	LINC02699	lncRNA	SENSE	ENSG00000254456	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.3ia	L1	L1	L1FLnI	chr11	25827796	25837918	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02699	ENSG00000254456	45779	AC013799.1	ENSG00000254754	86270	None	None
L1FLnI_11p14.3ja	L1	L1	L1FLnI	chr11	26110015	26120147	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC024341.1	ENSG00000255086	62417	ANO3	ENSG00000134343	68695	None	None
L1FLnI_11p14.2a	L1	L1	L1FLnI	chr11	26447597	26457733	+	coding	ANO3	protein_coding	SENSE	ENSG00000134343	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.2b	L1	L1	L1FLnI	chr11	26813026	26822167	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FIBIN	ENSG00000176971	171945	SLC5A12	ENSG00000148942	89599	None	None
L1FLnI_11p14.2c	L1	L1	L1FLnI	chr11	26961620	26971634	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC5A12	ENSG00000148942	238193	FIBIN	ENSG00000176971	22478	None	None
L1FLnI_11p14.2d	L1	L1	L1FLnI	chr11	26978454	26987261	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	FIBIN	ENSG00000176971	6851	SLC5A12	ENSG00000148942	255027	None	None
L1FLnI_11p14.2e	L1	L1	L1FLnI	chr11	27027824	27038525	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FIBIN	ENSG00000176971	30737	BBOX1	ENSG00000129151	2200	None	None
L1FLnI_11p14.1a	L1	L1	L1FLnI	chr11	27216205	27226232	+	noncoding	BBOX1-AS1	lncRNA	ANTISENSE	ENSG00000254560	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr11:27218729-27218742
L1FLnI_11p14.1b	L1	L1	L1FLnI	chr11	27267389	27277132	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC34	ENSG00000109881	53695	BBOX1-AS1	ENSG00000254560	47276	None	None
L1FLnI_11p14.1c	L1	L1	L1FLnI	chr11	27319439	27328097	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	BBOX1-AS1	ENSG00000254560	99326	CCDC34	ENSG00000109881	2730	None	None
L1FLnI_11p14.1d	L1	L1	L1FLnI	chr11	27661803	27671522	+	noncoding	BDNF-AS,BDNF	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000245573,ENSG00000176697	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.1e	L1	L1	L1FLnI	chr11	27681919	27692372	-	coding	BDNF-AS,BDNF	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000245573,ENSG00000176697	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.1f	L1	L1	L1FLnI	chr11	27935575	27945722	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HSP90AA2P	ENSG00000224411	44542	AC090159.1	ENSG00000255094	32947	None	None
L1FLnI_11p14.1g	L1	L1	L1FLnI	chr11	27935575	27945709	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HSP90AA2P	ENSG00000224411	44542	AC090159.1	ENSG00000255094	32960	None	None
L1FLnI_11p14.1h	L1	L1	L1FLnI	chr11	28216065	28226201	-	coding	METTL15	protein_coding	ANTISENSE	ENSG00000169519	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.1i	L1	L1	L1FLnI	chr11	28372122	28382182	-	coding	METTL15	protein_coding	ANTISENSE	ENSG00000169519	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.1j	L1	L1	L1FLnI	chr11	28638211	28647930	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	METTL15	ENSG00000169519	111170	LINC02758	ENSG00000248990	31253	None	None
L1FLnI_11p14.1k	L1	L1	L1FLnI	chr11	28786894	28797242	-	noncoding	LINC02742	lncRNA	ANTISENSE	ENSG00000249867	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.1l	L1	L1	L1FLnI	chr11	28786894	28795995	-	noncoding	LINC02742	lncRNA	ANTISENSE	ENSG00000249867	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.1m	L1	L1	L1FLnI	chr11	29045260	29054240	-	coding	LINC02742	lncRNA	ANTISENSE	ENSG00000249867	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.1n	L1	L1	L1FLnI	chr11	29070244	29080572	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090791.1	ENSG00000254526	79384	LINC02742	ENSG00000249867	5922	None	None
L1FLnI_11p14.1o	L1	L1	L1FLnI	chr11	29218521	29228895	-	noncoding	AC090791.1	lncRNA	ANTISENSE	ENSG00000254526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.1p	L1	L1	L1FLnI	chr11	29255587	29264489	-	noncoding	AC090791.1	lncRNA	ANTISENSE	ENSG00000254526	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.1q	L1	L1	L1FLnI	chr11	29412693	29422128	+	coding	LINC02755	lncRNA	ANTISENSE	ENSG00000254530	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.1r	L1	L1	L1FLnI	chr11	29693335	29701842	-	noncoding	LINC02755	lncRNA	SENSE	ENSG00000254530	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.1s	L1	L1	L1FLnI	chr11	29765170	29775318	-	coding	LINC02755,AC107973.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000254530,ENSG00000254734	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.1t	L1	L1	L1FLnI	chr11	29810184	29821671	-	coding	LINC02755,AC107973.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000254530,ENSG00000254734	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.1u	L1	L1	L1FLnI	chr11	29847550	29857041	+	noncoding	LINC02755,AC107973.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000254530,ENSG00000254734	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.1v	L1	L1	L1FLnI	chr11	30050709	30060734	-	coding	AL358944.1	lncRNA	SENSE	ENSG00000254532	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:30050957-30051103	None
L1FLnI_11p14.1w	L1	L1	L1FLnI	chr11	30062044	30071260	-	coding	AL358944.1	lncRNA	SENSE	ENSG00000254532	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.1x	L1	L1	L1FLnI	chr11	30174932	30185110	+	coding	AL358944.1	lncRNA	ANTISENSE	ENSG00000254532	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p14.1y	L1	L1	L1FLnI	chr11	30262645	30272787	-	coding	AL358944.1	lncRNA	SENSE	ENSG00000254532	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:30271931-30271964	None
L1FLnI_11p14.1z	L1	L1	L1FLnI	chr11	30670107	30680448	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MPPED2-AS1	ENSG00000254489	37524	AL122014.1	ENSG00000287373	93465	None	None
L1FLnI_11p13a	L1	L1	L1FLnI	chr11	31045991	31056503	+	noncoding	DCDC1	protein_coding	ANTISENSE	ENSG00000170959	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p13b	L1	L1	L1FLnI	chr11	31315156	31325180	-	coding	DCDC1	protein_coding	SENSE	ENSG00000170959	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p13c	L1	L1	L1FLnI	chr11	31328896	31339040	-	noncoding	DCDC1	protein_coding	SENSE	ENSG00000170959	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p13d	L1	L1	L1FLnI	chr11	31540512	31550644	+	coding	ELP4	protein_coding	SENSE	ENSG00000109911	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p13e	L1	L1	L1FLnI	chr11	31570695	31580444	+	coding	ELP4	protein_coding	SENSE	ENSG00000109911	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p13f	L1	L1	L1FLnI	chr11	31737255	31747393	+	coding	ELP4,AC131571.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000109911,ENSG00000228061	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p13g	L1	L1	L1FLnI	chr11	31943718	31953675	+	coding	PAUPAR,AL035078.4	lncRNA,protein_coding	SENSE,SENSE	ENSG00000281880,ENSG00000285283	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr11:31944426-31944427
L1FLnI_11p13h	L1	L1	L1FLnI	chr11	32122756	32132041	+	noncoding	THEM7P	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000227160	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p13i	L1	L1	L1FLnI	chr11	32661214	32671310	-	coding	CCDC73	protein_coding	SENSE	ENSG00000186714	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p13j	L1	L1	L1FLnI	chr11	32741171	32751580	-	noncoding	CCDC73	protein_coding	SENSE	ENSG00000186714	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p13k	L1	L1	L1FLnI	chr11	32759130	32768984	+	coding	CCDC73	protein_coding	ANTISENSE	ENSG00000186714	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p13l	L1	L1	L1FLnI	chr11	32940738	32950756	-	coding	QSER1	protein_coding	ANTISENSE	ENSG00000060749	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p13m	L1	L1	L1FLnI	chr11	32940752	32950756	-	coding	QSER1	protein_coding	ANTISENSE	ENSG00000060749	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p13n	L1	L1	L1FLnI	chr11	33624259	33634305	-	coding	KIAA1549L	protein_coding	ANTISENSE	ENSG00000110427	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p13o	L1	L1	L1FLnI	chr11	33676356	33686857	-	noncoding	AL049629.1	lncRNA	SENSE	ENSG00000255202	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p13p	L1	L1	L1FLnI	chr11	34388515	34399114	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL035079.1	ENSG00000220204	5549	ABTB2	ENSG00000166016	30505	None	None
L1FLnI_11p13q	L1	L1	L1FLnI	chr11	34702208	34711731	-	noncoding	AC087783.1	processed_pseudogene	ANTISENSE	ENSG00000271369	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p13r	L1	L1	L1FLnI	chr11	34734034	34743033	+	coding	AL359999.1	processed_pseudogene	SENSE	ENSG00000270491	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p13s	L1	L1	L1FLnI	chr11	34759712	34768440	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	APIP	ENSG00000149089	84654	AL359999.1	ENSG00000270491	16513	None	None
L1FLnI_11p13t	L1	L1	L1FLnI	chr11	34764487	34774197	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	APIP	ENSG00000149089	78897	AL359999.1	ENSG00000270491	21288	None	None
L1FLnI_11p13u	L1	L1	L1FLnI	chr11	35018480	35029032	+	coding	PDHX	protein_coding	SENSE	ENSG00000110435	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p13v	L1	L1	L1FLnI	chr11	35087577	35097286	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PDHX	ENSG00000110435	66986	AL356215.1	ENSG00000255521	35369	None	chr11:35088024-35088037,chr11:35088423-35088436,chr11:35088490-35088499
L1FLnI_11p13w	L1	L1	L1FLnI	chr11	35087577	35097271	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PDHX	ENSG00000110435	66986	AL356215.1	ENSG00000255521	35384	None	chr11:35088024-35088037,chr11:35088423-35088436,chr11:35088490-35088499
L1FLnI_11p13x	L1	L1	L1FLnI	chr11	35699280	35709423	+	coding	TRIM44	protein_coding	SENSE	ENSG00000166326	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p13y	L1	L1	L1FLnI	chr11	35772974	35783064	-	noncoding	TRIM44	protein_coding	ANTISENSE	ENSG00000166326	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p12a	L1	L1	L1FLnI	chr11	36551108	36561136	-	coding	RAG1	protein_coding	ANTISENSE	ENSG00000166349	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p12b	L1	L1	L1FLnI	chr11	37204561	37215071	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC061997.1	ENSG00000251838	487054	AC104042.1	ENSG00000254498	506694	None	None
L1FLnI_11p12c	L1	L1	L1FLnI	chr11	37211081	37219818	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC061997.1	ENSG00000251838	482307	AC104042.1	ENSG00000254498	513214	None	None
L1FLnI_11p12d	L1	L1	L1FLnI	chr11	37211257	37219818	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC061997.1	ENSG00000251838	482307	AC104042.1	ENSG00000254498	513390	None	None
L1FLnI_11p12e	L1	L1	L1FLnI	chr11	37240214	37250216	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC061997.1	ENSG00000251838	451909	AC104042.1	ENSG00000254498	542347	None	None
L1FLnI_11p12f	L1	L1	L1FLnI	chr11	37940601	37950426	-	noncoding	LINC02760	lncRNA	ANTISENSE	ENSG00000254516	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p12g	L1	L1	L1FLnI	chr11	37941009	37950426	-	noncoding	LINC02760	lncRNA	ANTISENSE	ENSG00000254516	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p12h	L1	L1	L1FLnI	chr11	38015237	38024968	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC103798.1	ENSG00000279004	1096	LRRC6P1	ENSG00000254784	186421	None	None
L1FLnI_11p12i	L1	L1	L1FLnI	chr11	38188242	38198385	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC103798.1	ENSG00000279004	174101	LRRC6P1	ENSG00000254784	13004	chr11:38188906-38189057	None
L1FLnI_11p12j	L1	L1	L1FLnI	chr11	38311466	38323002	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LRRC6P1	ENSG00000254784	98667	AC021713.1	ENSG00000255477	175993	None	None
L1FLnI_11p12k	L1	L1	L1FLnI	chr11	38519777	38528987	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021713.1	ENSG00000255477	19591	LINC02759	ENSG00000255175	89277	None	None
L1FLnI_11p12l	L1	L1	L1FLnI	chr11	38634648	38644872	-	noncoding	LINC02759	lncRNA	SENSE	ENSG00000255175	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p12m	L1	L1	L1FLnI	chr11	38725639	38736052	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021723.2	ENSG00000285751	288579	LINC01493	ENSG00000254562	39316	None	None
L1FLnI_11p12n	L1	L1	L1FLnI	chr11	38819989	38830563	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01493	ENSG00000254562	133666	AC021723.2	ENSG00000285751	194068	None	None
L1FLnI_11p12o	L1	L1	L1FLnI	chr11	38860886	38869760	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021723.2	ENSG00000285751	154871	LINC01493	ENSG00000254562	174563	None	None
L1FLnI_11p12p	L1	L1	L1FLnI	chr11	38860886	38869598	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021723.2	ENSG00000285751	155033	LINC01493	ENSG00000254562	174563	None	None
L1FLnI_11p12q	L1	L1	L1FLnI	chr11	39391433	39400483	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021749.1	ENSG00000270588	473299	RNU6-99P	ENSG00000201591	130220	None	None
L1FLnI_11p12r	L1	L1	L1FLnI	chr11	39391443	39400483	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021749.1	ENSG00000270588	473299	RNU6-99P	ENSG00000201591	130230	None	None
L1FLnI_11p12s	L1	L1	L1FLnI	chr11	39751541	39761685	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-99P	ENSG00000201591	490328	AC021749.1	ENSG00000270588	112097	None	None
L1FLnI_11p12t	L1	L1	L1FLnI	chr11	39806187	39815219	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-99P	ENSG00000201591	544974	AC021749.1	ENSG00000270588	58563	None	None
L1FLnI_11p12u	L1	L1	L1FLnI	chr11	39843158	39853154	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-99P	ENSG00000201591	581945	AC021749.1	ENSG00000270588	20628	None	None
L1FLnI_11p12v	L1	L1	L1FLnI	chr11	39877562	39887542	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC021749.1	ENSG00000270588	3174	AC021820.1	ENSG00000255347	196168	None	None
L1FLnI_11p12w	L1	L1	L1FLnI	chr11	39877562	39887529	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC021749.1	ENSG00000270588	3174	AC021820.1	ENSG00000255347	196181	None	None
L1FLnI_11p12x	L1	L1	L1FLnI	chr11	39884759	39893901	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021749.1	ENSG00000270588	10371	AC021820.1	ENSG00000255347	189809	None	None
L1FLnI_11p12y	L1	L1	L1FLnI	chr11	39980516	39990693	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC021749.1	ENSG00000270588	106128	AC021820.1	ENSG00000255347	93017	None	None
L1FLnI_11p12z	L1	L1	L1FLnI	chr11	40148445	40158914	+	noncoding	LRRC4C	protein_coding	ANTISENSE	ENSG00000148948	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:40150933-40151018	None
L1FLnI_11p12aa	L1	L1	L1FLnI	chr11	40584974	40595001	-	coding	LRRC4C	protein_coding	SENSE	ENSG00000148948	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p12ba	L1	L1	L1FLnI	chr11	40604520	40613050	+	noncoding	LRRC4C	protein_coding	ANTISENSE	ENSG00000148948	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p12ca	L1	L1	L1FLnI	chr11	40704711	40714831	-	noncoding	LRRC4C	protein_coding	SENSE	ENSG00000148948	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p12da	L1	L1	L1FLnI	chr11	40762000	40770607	+	noncoding	LRRC4C	protein_coding	ANTISENSE	ENSG00000148948	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p12ea	L1	L1	L1FLnI	chr11	40844657	40855091	-	coding	LRRC4C	protein_coding	SENSE	ENSG00000148948	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:40847653-40847802	None
L1FLnI_11p12fa	L1	L1	L1FLnI	chr11	40907066	40917210	+	coding	LRRC4C	protein_coding	ANTISENSE	ENSG00000148948	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p12ga	L1	L1	L1FLnI	chr11	40907066	40917234	+	coding	LRRC4C	protein_coding	ANTISENSE	ENSG00000148948	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p12ha	L1	L1	L1FLnI	chr11	41541231	41551420	+	noncoding	LINC02741	lncRNA	ANTISENSE	ENSG00000255388	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p12ia	L1	L1	L1FLnI	chr11	41596129	41605251	+	coding	LINC02741	lncRNA	ANTISENSE	ENSG00000255388	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p12ja	L1	L1	L1FLnI	chr11	41644596	41655025	-	noncoding	LINC02741	lncRNA	SENSE	ENSG00000255388	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p12ka	L1	L1	L1FLnI	chr11	41721247	41730581	-	coding	LINC01499	lncRNA	ANTISENSE	ENSG00000255171	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p12la	L1	L1	L1FLnI	chr11	41911579	41922029	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02745	ENSG00000255300	71352	AC023442.2	ENSG00000254822	34501	None	None
L1FLnI_11p12ma	L1	L1	L1FLnI	chr11	42201574	42211784	+	coding	LINC02740	lncRNA	ANTISENSE	ENSG00000255109	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p12na	L1	L1	L1FLnI	chr11	42373325	42383454	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02740	ENSG00000255109	119604	AC109810.1	ENSG00000254914	556321	None	None
L1FLnI_11p12oa	L1	L1	L1FLnI	chr11	42428765	42438786	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC109810.1	ENSG00000254914	500989	LINC02740	ENSG00000255109	175044	None	None
L1FLnI_11p12pa	L1	L1	L1FLnI	chr11	42428773	42438786	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC109810.1	ENSG00000254914	500989	LINC02740	ENSG00000255109	175052	None	None
L1FLnI_11p12qa	L1	L1	L1FLnI	chr11	42511149	42521297	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02740	ENSG00000255109	257428	AC109810.1	ENSG00000254914	418478	None	None
L1FLnI_11p12ra	L1	L1	L1FLnI	chr11	42684529	42694665	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02740	ENSG00000255109	430808	AC109810.1	ENSG00000254914	245110	None	None
L1FLnI_11p12sa	L1	L1	L1FLnI	chr11	42936834	42946842	+	coding	AC109810.1	processed_pseudogene	SENSE	ENSG00000254914	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p12ta	L1	L1	L1FLnI	chr11	42998868	43009018	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC009643.2	ENSG00000271028	54619	AC109810.1	ENSG00000254914	58870	None	None
L1FLnI_11p12ua	L1	L1	L1FLnI	chr11	43094513	43104651	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPKP3	ENSG00000251557	16111	AC009643.1	ENSG00000254725	28437	None	None
L1FLnI_11p12va	L1	L1	L1FLnI	chr11	43200732	43210880	-	coding	HNRNPKP3	transcribed_processed_pseudogene	SENSE	ENSG00000251557	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p12wa	L1	L1	L1FLnI	chr11	43206880	43216481	-	noncoding	HNRNPKP3	transcribed_processed_pseudogene	SENSE	ENSG00000251557	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p12xa	L1	L1	L1FLnI	chr11	43345603	43355618	-	coding	AC087276.3	lncRNA	SENSE	ENSG00000254907	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p11.2a	L1	L1	L1FLnI	chr11	43652902	43663041	-	coding	AC068205.1,AC068205.2	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000283217,ENSG00000283341	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p11.2b	L1	L1	L1FLnI	chr11	44434395	44443944	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ALX4	ENSG00000052850	124256	AC010768.4	ENSG00000255451	24520	None	None
L1FLnI_11p11.2c	L1	L1	L1FLnI	chr11	44638863	44647598	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL34P22	ENSG00000244267	9189	AC104010.1	ENSG00000275725	9173	None	None
L1FLnI_11p11.2d	L1	L1	L1FLnI	chr11	45011317	45021445	-	noncoding	AC068858.1	lncRNA	ANTISENSE	ENSG00000287984	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p11.2e	L1	L1	L1FLnI	chr11	45121815	45131997	-	coding	PRDM11	protein_coding	ANTISENSE	ENSG00000019485	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p11.2f	L1	L1	L1FLnI	chr11	45624094	45634237	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC103855.1	ENSG00000254514	40620	CHST1	ENSG00000175264	13452	None	None
L1FLnI_11p11.2g	L1	L1	L1FLnI	chr11	48185251	48195394	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4B1	ENSG00000175619	21416	PTPRJ	ENSG00000149177	14410	None	None
L1FLnI_11p11.2h	L1	L1	L1FLnI	chr11	48185263	48195394	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4B1	ENSG00000175619	21416	PTPRJ	ENSG00000149177	14422	None	None
L1FLnI_11p11.2i	L1	L1	L1FLnI	chr11	48230175	48240301	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4X2	ENSG00000172208	4755	OR4B2P	ENSG00000255514	1865	None	None
L1FLnI_11p11.2j	L1	L1	L1FLnI	chr11	48283223	48293752	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4S1	ENSG00000176555	12471	OR4X1	ENSG00000176567	18445	None	None
L1FLnI_11p11.2k	L1	L1	L1FLnI	chr11	48283245	48293752	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4S1	ENSG00000176555	12471	OR4X1	ENSG00000176567	18467	None	None
L1FLnI_11p11.2l	L1	L1	L1FLnI	chr11	48288937	48298311	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4X1	ENSG00000176567	24159	OR4S1	ENSG00000176555	7912	None	None
L1FLnI_11p11.2m	L1	L1	L1FLnI	chr11	48342480	48352633	+	coding	OR4C4P	unprocessed_pseudogene	ANTISENSE	ENSG00000197161	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p11.2n	L1	L1	L1FLnI	chr11	48399048	48408974	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4C5	ENSG00000176540	32583	OR4C2P	ENSG00000182565	11236	None	None
L1FLnI_11p11.2o	L1	L1	L1FLnI	chr11	48409565	48419727	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4C2P	ENSG00000182565	483	OR4C5	ENSG00000176540	43100	None	None
L1FLnI_11p11.2p	L1	L1	L1FLnI	chr11	48447551	48457582	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4C9P	ENSG00000254925	6471	OR4C10P	ENSG00000184789	14404	None	None
L1FLnI_11p11.2q	L1	L1	L1FLnI	chr11	48527419	48537575	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4A45P	ENSG00000213607	41861	OR4A43P	ENSG00000255534	448	None	None
L1FLnI_11p11.2r	L1	L1	L1FLnI	chr11	48541486	48551548	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4A45P	ENSG00000213607	27888	OR4A43P	ENSG00000255534	14515	None	None
L1FLnI_11p11.2s	L1	L1	L1FLnI	chr11	48548989	48559035	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4A45P	ENSG00000213607	20401	OR4A43P	ENSG00000255534	22018	None	None
L1FLnI_11p11.2t	L1	L1	L1FLnI	chr11	48561081	48570610	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4A45P	ENSG00000213607	8826	OR4A43P	ENSG00000255534	34110	None	None
L1FLnI_11p11.2u	L1	L1	L1FLnI	chr11	48611251	48621401	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4A44P	ENSG00000255053	6145	OR4A42P	ENSG00000254674	251	None	None
L1FLnI_11p11.2v	L1	L1	L1FLnI	chr11	48652280	48662018	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027369.6	ENSG00000255551	218093	OR4A44P	ENSG00000255053	23787	None	None
L1FLnI_11p11.2w	L1	L1	L1FLnI	chr11	48679546	48689646	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4A44P	ENSG00000255053	51053	AC027369.6	ENSG00000255551	190465	None	None
L1FLnI_11p11.2x	L1	L1	L1FLnI	chr11	48730490	48740521	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4A44P	ENSG00000255053	101997	AC027369.6	ENSG00000255551	139590	None	None
L1FLnI_11p11.2y	L1	L1	L1FLnI	chr11	48744876	48754215	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC027369.6	ENSG00000255551	125896	OR4A44P	ENSG00000255053	116383	None	None
L1FLnI_11p11.2z	L1	L1	L1FLnI	chr11	48799446	48808099	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC027369.6	ENSG00000255551	72012	OR4A44P	ENSG00000255053	170953	None	None
L1FLnI_11p11.12a	L1	L1	L1FLnI	chr11	48847196	48857224	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC027369.6	ENSG00000255551	22887	OR4A44P	ENSG00000255053	218703	None	None
L1FLnI_11p11.12b	L1	L1	L1FLnI	chr11	49039708	49049829	-	coding	AC084851.4	processed_pseudogene	SENSE	ENSG00000288434	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p11.12c	L1	L1	L1FLnI	chr11	49698506	49707010	-	noncoding	AC136759.1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000205035	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p11.12d	L1	L1	L1FLnI	chr11	49721785	49731817	+	coding	AC136759.1	transcribed_unprocessed_pseudogene	SENSE	ENSG00000205035	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p11.12e	L1	L1	L1FLnI	chr11	49774621	49784651	-	coding	AC136759.1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000205035	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p11.12f	L1	L1	L1FLnI	chr11	49774625	49784651	-	coding	AC136759.1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000205035	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_11p11.12	L1	L1	L1ORF2	chr11	49792142	49800191	-	coding	AC136759.1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000205035	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p11.12g	L1	L1	L1FLnI	chr11	49862779	49871555	+	coding	AP006587.6	lncRNA	SENSE	ENSG00000288177	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p11.12h	L1	L1	L1FLnI	chr11	50145353	50155497	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GTF2IP11	ENSG00000255199	42455	AC109635.4	ENSG00000255442	14659	None	None
L1FLnI_11p11.12i	L1	L1	L1FLnI	chr11	50193244	50203404	-	noncoding	AC109635.7	lncRNA	ANTISENSE	ENSG00000287538	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p11.12j	L1	L1	L1FLnI	chr11	50252669	50261393	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC109635.5	ENSG00000255500	6768	AC109635.1	ENSG00000236919	4908	None	None
L1FLnI_11p11.12k	L1	L1	L1FLnI	chr11	50323611	50333743	-	noncoding	AC024405.2	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000254840	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11p11.12l	L1	L1	L1FLnI	chr11	50690936	50701106	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC024405.1	ENSG00000214883	268620	OR4C50P	ENSG00000237610	3890374	None	None
L1FLnI_11p11.12m	L1	L1	L1FLnI	chr11	50702783	50712935	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4C50P	ENSG00000237610	3878545	AC024405.1	ENSG00000214883	280467	None	None
L1FLnI_11p11.12n	L1	L1	L1FLnI	chr11	50812851	50822864	-	NA	None	NA	NA	None	INTERGENIC	NA	NA	OR4C50P	ENSG00000237610	3768616	AC024405.1	ENSG00000214883	390535	None	None
L1FLnI_11q11a	L1	L1	L1FLnI	chr11	54570330	54580237	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC024405.1	ENSG00000214883	4148014	OR4C50P	ENSG00000237610	11243	None	None
L1FLnI_11q11b	L1	L1	L1FLnI	chr11	54580810	54590969	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4C50P	ENSG00000237610	511	AC024405.1	ENSG00000214883	4158494	None	None
L1FLnI_11q11c	L1	L1	L1FLnI	chr11	54618482	54628512	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4C7P	ENSG00000255312	6525	OR4C46	ENSG00000185926	14484	None	None
L1FLnI_11q11d	L1	L1	L1FLnI	chr11	54708068	54718207	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4A6P	ENSG00000255078	6640	OR4A5	ENSG00000221840	166	None	None
L1FLnI_11q11e	L1	L1	L1FLnI	chr11	54708076	54718207	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4A6P	ENSG00000255078	6640	OR4A5	ENSG00000221840	174	None	None
L1FLnI_11q11f	L1	L1	L1FLnI	chr11	54794117	54804132	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4A6P	ENSG00000255078	68301	TRIM48	ENSG00000150244	458023	None	None
L1FLnI_11q11g	L1	L1	L1FLnI	chr11	54834375	54844506	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4A6P	ENSG00000255078	108559	TRIM48	ENSG00000150244	417649	None	None
L1FLnI_11q11h	L1	L1	L1FLnI	chr11	54844615	54853446	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TRIM48	ENSG00000150244	408709	OR4A6P	ENSG00000255078	118799	None	None
L1FLnI_11q11i	L1	L1	L1FLnI	chr11	54943468	54953488	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4A6P	ENSG00000255078	217652	TRIM48	ENSG00000150244	308667	None	None
L1FLnI_11q11j	L1	L1	L1FLnI	chr11	55080870	55091031	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4A6P	ENSG00000255078	355054	TRIM48	ENSG00000150244	171124	None	None
L1FLnI_11q11k	L1	L1	L1FLnI	chr11	55129217	55139346	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4A6P	ENSG00000255078	403401	TRIM48	ENSG00000150244	122809	None	None
L1FLnI_11q11l	L1	L1	L1FLnI	chr11	55167041	55177164	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRIM48	ENSG00000150244	84991	OR4A6P	ENSG00000255078	441225	None	None
L1FLnI_11q11m	L1	L1	L1FLnI	chr11	55233826	55242474	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRIM48	ENSG00000150244	19681	OR4A6P	ENSG00000255078	508010	None	None
L1FLnI_11q11n	L1	L1	L1FLnI	chr11	55328793	55338930	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4A16	ENSG00000181961	4221	OR4A12P	ENSG00000254723	2120	None	None
L1FLnI_11q11o	L1	L1	L1FLnI	chr11	55352435	55361804	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4A16	ENSG00000181961	8204	OR4A15	ENSG00000181958	6080	None	None
L1FLnI_11q11p	L1	L1	L1FLnI	chr11	55371146	55379927	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4A15	ENSG00000181958	2228	OR4A9P	ENSG00000254891	8602	None	None
L1FLnI_11q11q	L1	L1	L1FLnI	chr11	55392766	55402909	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4X7P	ENSG00000255077	8617	OR4A9P	ENSG00000254891	3294	None	None
L1FLnI_11q11r	L1	L1	L1FLnI	chr11	55405688	55414744	-	noncoding	OR4X7P	unprocessed_pseudogene	ANTISENSE	ENSG00000255077	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q11s	L1	L1	L1FLnI	chr11	55456418	55466437	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4A17P	ENSG00000255196	11080	OR4A13P	ENSG00000181950	334	None	None
L1FLnI_11q11t	L1	L1	L1FLnI	chr11	55514732	55524724	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4C14P	ENSG00000233301	12278	OR4C1P	ENSG00000254576	3563	None	None
L1FLnI_11q11u	L1	L1	L1FLnI	chr11	55573666	55583842	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4C16	ENSG00000279514	606	OR4C11	ENSG00000172188	18518	None	None
L1FLnI_11q11v	L1	L1	L1FLnI	chr11	55682142	55692167	+	coding	OR4P1P,AP006437.1	unprocessed_pseudogene,lncRNA	SENSE,ANTISENSE	ENSG00000188439,ENSG00000254804	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q11w	L1	L1	L1FLnI	chr11	55743952	55754029	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR5D3P	ENSG00000186886	14331	OR5D17P	ENSG00000181837	948	None	None
L1FLnI_11q11x	L1	L1	L1FLnI	chr11	55758424	55767174	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5D13	ENSG00000279761	6264	OR5D17P	ENSG00000181837	2467	None	None
L1FLnI_11q12.1a	L1	L1	L1FLnI	chr11	55982763	55992517	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR7E5P	ENSG00000214880	2660	OR5F1	ENSG00000149133	1164	None	None
L1FLnI_11q12.1b	L1	L1	L1FLnI	chr11	56029325	56038650	+	noncoding	OR5AS1	protein_coding	SENSE	ENSG00000181785	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.1c	L1	L1	L1FLnI	chr11	56074465	56083084	-	noncoding	OR5BE1P	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000225538	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.1d	L1	L1	L1FLnI	chr11	56215967	56226126	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR8J2	ENSG00000254658	745	OR5T2	ENSG00000181718	5156	None	None
L1FLnI_11q12.1e	L1	L1	L1FLnI	chr11	56335083	56343606	+	noncoding	OR8K2P	unprocessed_pseudogene	SENSE	ENSG00000255134	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.1f	L1	L1	L1FLnI	chr11	56548547	56558551	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR5M10	ENSG00000254834	18185	OR5M11	ENSG00000255223	5266	None	None
L1FLnI_11q12.1g	L1	L1	L1FLnI	chr11	56586170	56596178	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR5M13P	ENSG00000166693	1248	OR5M10	ENSG00000254834	8383	None	None
L1FLnI_11q12.1h	L1	L1	L1FLnI	chr11	56701170	56709898	+	coding	OR9G1	protein_coding	SENSE	ENSG00000174914	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.1i	L1	L1	L1FLnI	chr11	56708910	56717421	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001803.1	ENSG00000254953	18895	OR9G1	ENSG00000174914	5026	None	None
L1FLnI_11q12.1j	L1	L1	L1FLnI	chr11	57059254	57069422	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR5BP1P	ENSG00000273255	3122	LRRC55	ENSG00000183908	112325	None	None
L1FLnI_11q12.1k	L1	L1	L1FLnI	chr11	57844359	57854495	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTNND1	ENSG00000198561	24813	OR5BA1P	ENSG00000255303	7453	None	None
L1FLnI_11q12.1l	L1	L1	L1FLnI	chr11	57947053	57957490	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYCSP26	ENSG00000254601	47896	OR5BD1P	ENSG00000254749	639	None	None
L1FLnI_11q12.1m	L1	L1	L1FLnI	chr11	57993664	58003687	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CYCSP26	ENSG00000254601	1699	OR5BD1P	ENSG00000254749	47250	chr11:58002951-58003369	None
L1FLnI_11q12.1n	L1	L1	L1FLnI	chr11	58276837	58287246	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR10Q2P	ENSG00000272900	4580	OR10W1	ENSG00000172772	8577	None	None
L1FLnI_11q12.1o	L1	L1	L1FLnI	chr11	58303644	58313165	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR5BC1P	ENSG00000255218	4472	OR10Q2P	ENSG00000272900	10879	None	None
L1FLnI_11q12.1p	L1	L1	L1FLnI	chr11	58424860	58434576	+	noncoding	OR5B2	protein_coding	ANTISENSE	ENSG00000172365	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.1q	L1	L1	L1FLnI	chr11	58746138	58756492	+	noncoding	AP000445.2	unprocessed_pseudogene	ANTISENSE	ENSG00000254926	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.1r	L1	L1	L1FLnI	chr11	58812480	58822598	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMA16P1	ENSG00000255265	15626	GLYATL2	ENSG00000156689	11467	None	None
L1FLnI_11q12.1s	L1	L1	L1FLnI	chr11	58812480	58822589	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMA16P1	ENSG00000255265	15626	GLYATL2	ENSG00000156689	11476	None	None
L1FLnI_11q12.1t	L1	L1	L1FLnI	chr11	58870785	58880922	-	coding	GLYATL2,GLYATL1P2	protein_coding,transcribed_unprocessed_pseudogene	SENSE,ANTISENSE	ENSG00000156689,ENSG00000254717	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.1u	L1	L1	L1FLnI	chr11	58870795	58880922	-	coding	GLYATL2,GLYATL1P2	protein_coding,transcribed_unprocessed_pseudogene	SENSE,ANTISENSE	ENSG00000156689,ENSG00000254717	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.1v	L1	L1	L1FLnI	chr11	58983453	58993573	-	noncoding	GLYATL1,AP001636.3,GLYATL1P1	protein_coding,lncRNA,unprocessed_pseudogene	ANTISENSE,SENSE,ANTISENSE	ENSG00000166840,ENSG00000255240,ENSG00000255189	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.1w	L1	L1	L1FLnI	chr11	59011746	59021881	+	coding	GLYATL1,AP001636.3	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000166840,ENSG00000255240	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.1x	L1	L1	L1FLnI	chr11	59229751	59240212	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL42P	ENSG00000263999	15052	WARS1P1	ENSG00000225802	15148	None	None
L1FLnI_11q12.1y	L1	L1	L1FLnI	chr11	59314971	59325091	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5BR1P	ENSG00000255386	7666	OR5AN2P	ENSG00000235678	4395	None	None
L1FLnI_11q12.1z	L1	L1	L1FLnI	chr11	59343679	59353814	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR5AN1	ENSG00000176495	5081	OR5BR1P	ENSG00000255386	9593	None	None
L1FLnI_11q12.1aa	L1	L1	L1FLnI	chr11	59381156	59391295	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR5BB1P	ENSG00000198261	59	OR5AN1	ENSG00000176495	9442	None	None
L1FLnI_11q12.1ba	L1	L1	L1FLnI	chr11	59886592	59895983	-	noncoding	OOSP3	protein_coding	ANTISENSE	ENSG00000285231	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.1ca	L1	L1	L1FLnI	chr11	59905056	59914239	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OOSP1	ENSG00000284873	24193	SRD5A3P1	ENSG00000270929	5923	None	None
L1FLnI_11q12.1da	L1	L1	L1FLnI	chr11	60005145	60014404	-	noncoding	OOSP4B	protein_coding	ANTISENSE	ENSG00000255393	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.2a	L1	L1	L1FLnI	chr11	60431919	60441941	+	coding	MS4A5	protein_coding	SENSE	ENSG00000166930	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_11q12.2	L1	L1	L1FLI	chr11	60531158	60539204	+	coding	MS4A13	protein_coding	SENSE	ENSG00000204979	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.2b	L1	L1	L1FLnI	chr11	60546895	60557014	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MS4A13	ENSG00000204979	4174	AP003399.1	ENSG00000283601	20842	None	None
L1FLnI_11q12.3a	L1	L1	L1FLnI	chr11	62154826	62163428	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	INCENP	ENSG00000149503	1657	EEF1DP8	ENSG00000236607	5865	None	None
L1FLnI_11q12.3b	L1	L1	L1FLnI	chr11	62302061	62310620	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPM1P35	ENSG00000255213	20326	SCGB1D4	ENSG00000197745	2986	None	None
L1FLnI_11q12.3c	L1	L1	L1FLnI	chr11	63035819	63045933	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP001858.1	ENSG00000253547	852	AP001858.2	ENSG00000256041	2716	None	None
L1FLnI_11q12.3d	L1	L1	L1FLnI	chr11	63072454	63082611	-	coding	SLC22A24	protein_coding	SENSE	ENSG00000197658	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.3e	L1	L1	L1FLnI	chr11	63163382	63173105	+	noncoding	SLC22A10,SLC22A25	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000184999,ENSG00000196600	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.3f	L1	L1	L1FLnI	chr11	63185032	63195194	-	coding	SLC22A10,SLC22A25	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000184999,ENSG00000196600	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.3g	L1	L1	L1FLnI	chr11	63185047	63195194	-	coding	SLC22A10,SLC22A25	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000184999,ENSG00000196600	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.3h	L1	L1	L1FLnI	chr11	63189769	63199230	+	coding	SLC22A10,SLC22A25	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000184999,ENSG00000196600	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.3i	L1	L1	L1FLnI	chr11	63198345	63208073	+	noncoding	SLC22A10,SLC22A25	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000184999,ENSG00000196600	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.3j	L1	L1	L1FLnI	chr11	63230152	63240305	-	coding	SLC22A10,AP001880.2	protein_coding,unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000184999,ENSG00000256863	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.3k	L1	L1	L1FLnI	chr11	63309502	63319625	+	noncoding	SLC22A10	protein_coding	SENSE	ENSG00000184999	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.3l	L1	L1	L1FLnI	chr11	63317434	63327104	+	noncoding	SLC22A10	protein_coding	SENSE	ENSG00000184999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.3m	L1	L1	L1FLnI	chr11	63317434	63327112	+	noncoding	SLC22A10	protein_coding	SENSE	ENSG00000184999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.3n	L1	L1	L1FLnI	chr11	63327598	63336297	-	coding	SLC22A10	protein_coding	ANTISENSE	ENSG00000184999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.3o	L1	L1	L1FLnI	chr11	63343924	63353938	-	coding	SLC22A10	protein_coding	ANTISENSE	ENSG00000184999	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.3p	L1	L1	L1FLnI	chr11	63354626	63363796	-	noncoding	SLC22A10	protein_coding	ANTISENSE	ENSG00000184999	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q12.3q	L1	L1	L1FLnI	chr11	63415233	63425419	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC22A9	ENSG00000149742	4939	PLAAT5	ENSG00000168004	35985	None	None
L1FLnI_11q12.3r	L1	L1	L1FLnI	chr11	63426948	63435803	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC22A9	ENSG00000149742	16654	PLAAT5	ENSG00000168004	25601	None	None
L1FLnI_11q12.3s	L1	L1	L1FLnI	chr11	63431805	63441826	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC22A9	ENSG00000149742	21511	PLAAT5	ENSG00000168004	19578	None	None
L1FLnI_11q12.3t	L1	L1	L1FLnI	chr11	63478570	63487316	+	noncoding	PLAAT5	protein_coding	ANTISENSE	ENSG00000168004	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q13.4a	L1	L1	L1FLnI	chr11	71287217	71296873	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002387.1	ENSG00000172900	85728	SHANK2	ENSG00000162105	34640	None	None
L1FLnI_11q13.4b	L1	L1	L1FLnI	chr11	71507549	71516948	+	coding	NADSYN1	protein_coding	SENSE	ENSG00000172890	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q13.4c	L1	L1	L1FLnI	chr11	71720229	71730343	+	coding	AP003498.1,ENPP7P8	lncRNA,transcribed_unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000248671,ENSG00000255319	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q13.4d	L1	L1	L1FLnI	chr11	73057512	73067991	+	noncoding	FCHSD2	protein_coding	ANTISENSE	ENSG00000137478	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q13.4e	L1	L1	L1FLnI	chr11	74288949	74298503	-	coding	P4HA3	protein_coding	SENSE	ENSG00000149380	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q13.4f	L1	L1	L1FLnI	chr11	74876965	74887032	-	coding	XRRA1,AP001992.1	protein_coding,transcribed_processed_pseudogene	SENSE,ANTISENSE	ENSG00000166435,ENSG00000241170	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q13.4g	L1	L1	L1FLnI	chr11	74883939	74894065	+	coding	XRRA1,AP001992.1	protein_coding,transcribed_processed_pseudogene	ANTISENSE,SENSE	ENSG00000166435,ENSG00000241170	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q13.4h	L1	L1	L1FLnI	chr11	74891480	74900463	+	coding	XRRA1,AP001992.1	protein_coding,transcribed_processed_pseudogene	ANTISENSE,SENSE	ENSG00000166435,ENSG00000241170	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:74897630-74897828,chr11:74898442-74898785,chr11:74898818-74898943	None
L1FLnI_11q13.4i	L1	L1	L1FLnI	chr11	75115799	75125966	+	coding	AP001972.4,SLCO2B1	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000255395,ENSG00000137491	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q13.5a	L1	L1	L1FLnI	chr11	75681658	75692138	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MOGAT2	ENSG00000166391	25700	MAP6	ENSG00000171533	12538	chr11:75689854-75690251	chr11:75690531-75690536
L1FLnI_11q13.5b	L1	L1	L1FLnI	chr11	75745118	75755149	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL786P	ENSG00000263993	2692	AP001922.1	ENSG00000247867	3306	None	None
L1FLnI_11q13.5c	L1	L1	L1FLnI	chr11	75974167	75983518	-	coding	UVRAG	protein_coding	ANTISENSE	ENSG00000198382	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q13.5d	L1	L1	L1FLnI	chr11	76941075	76950679	-	noncoding	ACER3	protein_coding	ANTISENSE	ENSG00000078124	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q13.5e	L1	L1	L1FLnI	chr11	76941424	76950679	-	noncoding	ACER3	protein_coding	ANTISENSE	ENSG00000078124	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q13.5f	L1	L1	L1FLnI	chr11	76960335	76970455	+	coding	ACER3,AP002498.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000078124,ENSG00000254988	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q13.5g	L1	L1	L1FLnI	chr11	77217895	77227831	-	noncoding	GDPD4	protein_coding	SENSE	ENSG00000178795	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr11:77225140-77225308	None
L1FLnI_11q13.5h	L1	L1	L1FLnI	chr11	77323206	77332296	+	coding	PAK1	protein_coding	ANTISENSE	ENSG00000149269	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.1a	L1	L1	L1FLnI	chr11	78596938	78607127	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TENM4	ENSG00000149256	45702	COPS8P3	ENSG00000254697	14782	None	None
L1FLI_11q14.1	L1	L1	L1FLI	chr11	78676760	78684806	-	coding	TENM4	protein_coding	SENSE	ENSG00000149256	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.1b	L1	L1	L1FLnI	chr11	78997717	79006478	+	noncoding	TENM4	protein_coding	ANTISENSE	ENSG00000149256	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.1c	L1	L1	L1FLnI	chr11	79549155	79559180	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TENM4	ENSG00000149256	108125	AP001978.1	ENSG00000255209	45787	None	None
L1FLnI_11q14.1d	L1	L1	L1FLnI	chr11	79582591	79591629	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TENM4	ENSG00000149256	141561	AP001978.1	ENSG00000255209	13338	None	None
L1FLnI_11q14.1e	L1	L1	L1FLnI	chr11	79860915	79871356	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001978.1	ENSG00000255209	248615	AP001541.1	ENSG00000279295	95449	None	None
L1FLnI_11q14.1f	L1	L1	L1FLnI	chr11	80105876	80116026	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001284.1	ENSG00000254471	116246	AP006295.1	ENSG00000254434	205594	chr11:80107278-80107508	None
L1FLnI_11q14.1g	L1	L1	L1FLnI	chr11	80794017	80804434	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02720	ENSG00000255178	31191	AP003398.1	ENSG00000254437	152883	None	None
L1FLnI_11q14.1h	L1	L1	L1FLnI	chr11	80899121	80907921	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02720	ENSG00000255178	136295	AP003398.1	ENSG00000254437	49396	None	None
L1FLnI_11q14.1i	L1	L1	L1FLnI	chr11	80899121	80909725	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02720	ENSG00000255178	136295	AP003398.1	ENSG00000254437	47592	None	None
L1FLnI_11q14.1j	L1	L1	L1FLnI	chr11	81533800	81543921	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTND4LP18	ENSG00000254747	8305	AP003464.1	ENSG00000287912	102280	None	None
L1FLnI_11q14.1k	L1	L1	L1FLnI	chr11	81653015	81662434	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4300HG	ENSG00000245832	158838	MTND6P25	ENSG00000255316	96590	None	None
L1FLnI_11q14.1l	L1	L1	L1FLnI	chr11	81689859	81700061	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTND6P25	ENSG00000255316	133434	MIR4300HG	ENSG00000245832	121211	None	None
L1FLnI_11q14.1m	L1	L1	L1FLnI	chr11	81978374	81987033	-	noncoding	MIR4300HG,AP002802.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000245832,ENSG00000254511	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.1n	L1	L1	L1FLnI	chr11	82063151	82072486	-	noncoding	MIR4300HG	lncRNA	SENSE	ENSG00000245832	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.1o	L1	L1	L1FLnI	chr11	82116467	82126606	+	coding	MIR4300HG	lncRNA	ANTISENSE	ENSG00000245832	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.1p	L1	L1	L1FLnI	chr11	82152367	82162391	+	coding	MIR4300HG	lncRNA	ANTISENSE	ENSG00000245832	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.1q	L1	L1	L1FLnI	chr11	82274802	82283989	+	coding	MIR4300HG	lncRNA	ANTISENSE	ENSG00000245832	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.1r	L1	L1	L1FLnI	chr11	82949871	82960349	-	noncoding	PRCP,DDIAS,AP000893.1	protein_coding,protein_coding,processed_pseudogene	SENSE,ANTISENSE,ANTISENSE	ENSG00000137509,ENSG00000165490,ENSG00000242279	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.1s	L1	L1	L1FLnI	chr11	83262636	83272755	+	noncoding	CCDC90B	protein_coding	ANTISENSE	ENSG00000137500	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.1t	L1	L1	L1FLnI	chr11	83512025	83522164	-	coding	DLG2	protein_coding	SENSE	ENSG00000150672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.1u	L1	L1	L1FLnI	chr11	83512037	83522164	-	coding	DLG2	protein_coding	SENSE	ENSG00000150672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.1v	L1	L1	L1FLnI	chr11	83584150	83594156	+	coding	DLG2	protein_coding	ANTISENSE	ENSG00000150672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.1w	L1	L1	L1FLnI	chr11	83880457	83890623	+	coding	DLG2	protein_coding	ANTISENSE	ENSG00000150672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.1x	L1	L1	L1FLnI	chr11	85139946	85150809	-	noncoding	DLG2	protein_coding	SENSE	ENSG00000150672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.1y	L1	L1	L1FLnI	chr11	85139946	85149722	-	noncoding	DLG2	protein_coding	SENSE	ENSG00000150672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.1z	L1	L1	L1FLnI	chr11	85167623	85178192	+	noncoding	DLG2	protein_coding	ANTISENSE	ENSG00000150672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_11q14.1	L1	L1	L1ORF2	chr11	85323758	85331804	+	coding	DLG2	protein_coding	ANTISENSE	ENSG00000150672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.1aa	L1	L1	L1FLnI	chr11	85384310	85394129	+	noncoding	DLG2	protein_coding	ANTISENSE	ENSG00000150672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.1ba	L1	L1	L1FLnI	chr11	85384310	85394562	+	noncoding	DLG2	protein_coding	ANTISENSE	ENSG00000150672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.1ca	L1	L1	L1FLnI	chr11	85414364	85424908	-	noncoding	DLG2	protein_coding	SENSE	ENSG00000150672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.1da	L1	L1	L1FLnI	chr11	85427687	85437829	+	noncoding	DLG2	protein_coding	ANTISENSE	ENSG00000150672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.1ea	L1	L1	L1FLnI	chr11	85453679	85464164	-	noncoding	DLG2,AP003035.1	protein_coding,processed_pseudogene	SENSE,SENSE	ENSG00000150672,ENSG00000254897	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.1fa	L1	L1	L1FLnI	chr11	85542493	85552941	-	coding	DLG2	protein_coding	SENSE	ENSG00000150672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.2a	L1	L1	L1FLnI	chr11	86308061	86316573	-	noncoding	HIKESHI	protein_coding	ANTISENSE	ENSG00000149196	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.2b	L1	L1	L1FLnI	chr11	86308073	86316573	-	noncoding	HIKESHI	protein_coding	ANTISENSE	ENSG00000149196	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.2c	L1	L1	L1FLnI	chr11	86522384	86532485	+	coding	AP001831.1,ME3	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000254733,ENSG00000151376	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.2d	L1	L1	L1FLnI	chr11	86537340	86547456	+	noncoding	AP001831.1,ME3	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000254733,ENSG00000151376	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.2e	L1	L1	L1FLnI	chr11	86594461	86604608	+	coding	AP001831.1,ME3	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000254733,ENSG00000151376	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.2f	L1	L1	L1FLnI	chr11	86647114	86657259	+	coding	ME3	protein_coding	ANTISENSE	ENSG00000151376	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.2g	L1	L1	L1FLnI	chr11	86823980	86834136	-	coding	PRSS23,OR7E13P,AP000654.1	protein_coding,unprocessed_pseudogene,lncRNA	ANTISENSE,SENSE,ANTISENSE	ENSG00000150687,ENSG00000197882,ENSG00000269895	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.2h	L1	L1	L1FLnI	chr11	86962027	86971725	-	noncoding	FZD4-DT	lncRNA	ANTISENSE	ENSG00000246523	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.2i	L1	L1	L1FLnI	chr11	87043806	87053692	+	coding	TMEM135	protein_coding	SENSE	ENSG00000166575	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.2j	L1	L1	L1FLnI	chr11	87165613	87174494	-	noncoding	TMEM135	protein_coding	ANTISENSE	ENSG00000166575	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.2k	L1	L1	L1FLnI	chr11	87241360	87251500	-	coding	TMEM135	protein_coding	ANTISENSE	ENSG00000166575	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.2l	L1	L1	L1FLnI	chr11	87339533	87349561	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP003497.1	ENSG00000255391	131175	PSMA2P1	ENSG00000254582	9481	chr11:87346274-87346661	None
L1FLnI_11q14.2m	L1	L1	L1FLnI	chr11	87501714	87511884	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP001784.1	ENSG00000278929	54110	AP003497.2	ENSG00000279701	10604	None	None
L1FLnI_11q14.2n	L1	L1	L1FLnI	chr11	87585226	87595597	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001784.1	ENSG00000278929	18805	RNU6-1135P	ENSG00000223015	11186	None	None
L1FLnI_11q14.2o	L1	L1	L1FLnI	chr11	87617653	87627699	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP000756.2	ENSG00000283412	20790	RNU6-1135P	ENSG00000223015	10768	chr11:87617944-87618107	None
L1FLnI_11q14.2p	L1	L1	L1FLnI	chr11	87652060	87662216	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02711	ENSG00000255183	56138	AP000756.2	ENSG00000283412	3511	None	None
L1FLnI_11q14.2q	L1	L1	L1FLnI	chr11	87697600	87707715	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02711	ENSG00000255183	10639	AP000756.2	ENSG00000283412	49051	None	None
L1FLnI_11q14.2r	L1	L1	L1FLnI	chr11	87757910	87768044	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCYBP41	ENSG00000254650	46991	AP000756.1	ENSG00000279341	36677	None	None
L1FLnI_11q14.2s	L1	L1	L1FLnI	chr11	87945895	87955521	-	coding	AP000676.5	lncRNA	SENSE	ENSG00000285835	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.2t	L1	L1	L1FLnI	chr11	88023745	88033890	+	coding	AP000676.5	lncRNA	ANTISENSE	ENSG00000285835	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.2u	L1	L1	L1FLnI	chr11	88192238	88201766	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTSC	ENSG00000109861	91826	MIR3166	ENSG00000266581	15645	chr11:88197031-88197255	None
L1FLnI_11q14.2v	L1	L1	L1FLnI	chr11	88217695	88227863	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CTSC	ENSG00000109861	65729	MIR3166	ENSG00000266581	41102	None	None
L1FLnI_11q14.2w	L1	L1	L1FLnI	chr11	88224146	88235220	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTSC	ENSG00000109861	58372	MIR3166	ENSG00000266581	47553	None	None
L1FLnI_11q14.2x	L1	L1	L1FLnI	chr11	88224535	88235220	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTSC	ENSG00000109861	58372	MIR3166	ENSG00000266581	47942	None	None
L1FLnI_11q14.2y	L1	L1	L1FLnI	chr11	88236996	88247120	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3166	ENSG00000266581	60403	CTSC	ENSG00000109861	46472	None	None
L1FLnI_11q14.2z	L1	L1	L1FLnI	chr11	88256703	88267365	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTSC	ENSG00000109861	26227	MIR3166	ENSG00000266581	80110	None	None
L1FLnI_11q14.2aa	L1	L1	L1FLnI	chr11	88264449	88273953	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3166	ENSG00000266581	87856	CTSC	ENSG00000109861	19639	chr11:88270629-88270708	None
L1FLnI_11q14.2ba	L1	L1	L1FLnI	chr11	88457353	88467484	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRM5-AS1	ENSG00000255082	37092	AP003120.1	ENSG00000288018	29177	None	None
L1FLnI_11q14.3a	L1	L1	L1FLnI	chr11	88721110	88731524	+	noncoding	GRM5	protein_coding	ANTISENSE	ENSG00000168959	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.3b	L1	L1	L1FLnI	chr11	88744350	88754222	+	noncoding	GRM5	protein_coding	ANTISENSE	ENSG00000168959	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:88745707-88745961	None
L1FLnI_11q14.3c	L1	L1	L1FLnI	chr11	88754691	88763686	+	noncoding	GRM5	protein_coding	ANTISENSE	ENSG00000168959	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.3d	L1	L1	L1FLnI	chr11	88771953	88782087	-	coding	GRM5	protein_coding	SENSE	ENSG00000168959	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.3e	L1	L1	L1FLnI	chr11	88983497	88993527	+	coding	GRM5	protein_coding	ANTISENSE	ENSG00000168959	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.3f	L1	L1	L1FLnI	chr11	89205471	89215219	+	noncoding	TYR	protein_coding	SENSE	ENSG00000077498	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.3g	L1	L1	L1FLnI	chr11	89312760	89322755	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NOX4	ENSG00000086991	1598	AP000720.2	ENSG00000279603	11283	None	None
L1FLnI_11q14.3h	L1	L1	L1FLnI	chr11	89312770	89322755	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NOX4	ENSG00000086991	1598	AP000720.2	ENSG00000279603	11293	None	None
L1FLnI_11q14.3i	L1	L1	L1FLnI	chr11	89422749	89432859	+	coding	NOX4	protein_coding	ANTISENSE	ENSG00000086991	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.3j	L1	L1	L1FLnI	chr11	89740689	89750714	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP003122.5	ENSG00000255540	5907	UBTFL2	ENSG00000234376	2071	None	None
L1FLnI_11q14.3k	L1	L1	L1FLnI	chr11	89786282	89796396	+	coding	AP004833.2,AP004833.3	unprocessed_pseudogene,processed_pseudogene	SENSE,ANTISENSE	ENSG00000255162,ENSG00000255285	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.3l	L1	L1	L1FLnI	chr11	90043283	90053396	-	coding	AP004607.2,AP004607.4	processed_pseudogene,unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000254803,ENSG00000254916	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.3m	L1	L1	L1FLnI	chr11	90089198	90099229	-	coding	AP000648.2	processed_pseudogene	SENSE	ENSG00000254436	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.3n	L1	L1	L1FLnI	chr11	90264771	90275190	-	coding	DISC1FP1	lncRNA	ANTISENSE	ENSG00000261645	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.3o	L1	L1	L1FLnI	chr11	90264771	90274609	-	coding	DISC1FP1	lncRNA	ANTISENSE	ENSG00000261645	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.3p	L1	L1	L1FLnI	chr11	90296186	90306587	-	noncoding	DISC1FP1	lncRNA	ANTISENSE	ENSG00000261645	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_11q14.3	L1	L1	L1FLI	chr11	90399051	90407101	-	coding	DISC1FP1	lncRNA	ANTISENSE	ENSG00000261645	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.3q	L1	L1	L1FLnI	chr11	90555720	90564765	+	noncoding	DISC1FP1,MIR4490	lncRNA,miRNA	SENSE,ANTISENSE	ENSG00000261645,ENSG00000266703	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.3r	L1	L1	L1FLnI	chr11	90576973	90587107	-	coding	DISC1FP1	lncRNA	ANTISENSE	ENSG00000261645	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.3s	L1	L1	L1FLnI	chr11	90616432	90625734	+	noncoding	DISC1FP1	lncRNA	SENSE	ENSG00000261645	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.3t	L1	L1	L1FLnI	chr11	90685204	90695334	-	coding	DISC1FP1	lncRNA	ANTISENSE	ENSG00000261645	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.3u	L1	L1	L1FLnI	chr11	90875203	90884082	+	coding	DISC1FP1	lncRNA	SENSE	ENSG00000261645	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_11q14.3	L1	L1	L1ORF2	chr11	90965259	90973304	-	coding	AP001002.3	TEC	SENSE	ENSG00000280085	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q14.3v	L1	L1	L1FLnI	chr11	91315809	91325926	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002791.1	ENSG00000280093	56983	LINC02748	ENSG00000255187	81421	None	None
L1FLnI_11q14.3w	L1	L1	L1FLnI	chr11	91333857	91343085	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02748	ENSG00000255187	99469	AP002791.1	ENSG00000280093	39824	chr11:91334989-91335004	None
L1FLnI_11q14.3x	L1	L1	L1FLnI	chr11	91427100	91437505	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02756	ENSG00000255332	356814	AP002791.1	ENSG00000280093	43811	None	None
L1FLnI_11q14.3y	L1	L1	L1FLnI	chr11	91471446	91480201	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002791.1	ENSG00000280093	88157	LINC02756	ENSG00000255332	314118	None	None
L1FLnI_11q14.3z	L1	L1	L1FLnI	chr11	91955510	91966284	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUBB4BP4	ENSG00000254961	5476	AP002799.1	ENSG00000278859	26549	None	None
L1FLnI_11q14.3aa	L1	L1	L1FLnI	chr11	92009012	92019172	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7AP57	ENSG00000242248	141934	AP002799.1	ENSG00000278859	15757	None	None
L1FLnI_11q14.3ba	L1	L1	L1FLnI	chr11	92023390	92033624	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP002799.1	ENSG00000278859	30135	RPL7AP57	ENSG00000242248	127482	None	None
L1FLnI_11q14.3ca	L1	L1	L1FLnI	chr11	92069036	92079181	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP002799.1	ENSG00000278859	75781	RPL7AP57	ENSG00000242248	81925	None	None
L1FLnI_11q14.3da	L1	L1	L1FLnI	chr11	92069036	92079171	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP002799.1	ENSG00000278859	75781	RPL7AP57	ENSG00000242248	81935	None	None
L1FLnI_11q14.3ea	L1	L1	L1FLnI	chr11	92165901	92176077	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7AP57	ENSG00000242248	4012	NDUFB11P1	ENSG00000235547	159955	None	None
L1FLnI_11q14.3fa	L1	L1	L1FLnI	chr11	92424891	92434015	-	noncoding	FAT3	protein_coding	ANTISENSE	ENSG00000165323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q21a	L1	L1	L1FLnI	chr11	93039417	93048528	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTNR1B	ENSG00000134640	54351	RPL26P31	ENSG00000242807	3867	None	None
L1FLI_11q21a	L1	L1	L1FLI	chr11	93135638	93143687	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP003072.4	ENSG00000279304	1474	SLC36A4	ENSG00000180773	487	None	None
L1FLnI_11q21b	L1	L1	L1FLnI	chr11	93171949	93182024	-	coding	SLC36A4	protein_coding	SENSE	ENSG00000180773	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q21c	L1	L1	L1FLnI	chr11	93301095	93310486	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003969.2	ENSG00000279684	12192	DEUP1	ENSG00000165325	19485	None	None
L1FLI_11q21b	L1	L1	L1FLI	chr11	93419972	93428022	+	coding	DEUP1	protein_coding	SENSE	ENSG00000165325	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q21d	L1	L1	L1FLnI	chr11	93438600	93448717	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SMCO4	ENSG00000166002	29755	DEUP1	ENSG00000165325	113	None	None
L1FLnI_11q21e	L1	L1	L1FLnI	chr11	93454597	93464700	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DEUP1	ENSG00000165325	16110	SMCO4	ENSG00000166002	13772	None	None
L1FLnI_11q21f	L1	L1	L1FLnI	chr11	94033359	94043388	+	coding	HEPHL1	protein_coding	SENSE	ENSG00000181333	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q21g	L1	L1	L1FLnI	chr11	94093512	94103660	-	coding	HEPHL1	protein_coding	ANTISENSE	ENSG00000181333	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q21h	L1	L1	L1FLnI	chr11	94093518	94103660	-	coding	HEPHL1	protein_coding	ANTISENSE	ENSG00000181333	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q21i	L1	L1	L1FLnI	chr11	94156231	94166363	-	coding	PANX1	protein_coding	ANTISENSE	ENSG00000110218	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q21j	L1	L1	L1FLnI	chr11	94232026	94242028	-	coding	AP002784.1	lncRNA	ANTISENSE	ENSG00000250519	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q21k	L1	L1	L1FLnI	chr11	94244584	94254691	+	noncoding	AP002784.1	lncRNA	SENSE	ENSG00000250519	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q21l	L1	L1	L1FLnI	chr11	94366878	94377021	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	IZUMO1R	ENSG00000183560	59157	GPR83	ENSG00000123901	295	None	None
L1FLnI_11q21m	L1	L1	L1FLnI	chr11	94380857	94390832	+	coding	GPR83	protein_coding	ANTISENSE	ENSG00000123901	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q21n	L1	L1	L1FLnI	chr11	94419546	94429081	+	noncoding	MRE11	protein_coding	ANTISENSE	ENSG00000020922	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q21o	L1	L1	L1FLnI	chr11	95342677	95353158	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000787.1	ENSG00000245552	108286	AP001790.1	ENSG00000250390	129248	None	None
L1FLI_11q21c	L1	L1	L1FLI	chr11	95435215	95443260	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP000787.1	ENSG00000245552	200824	AP001790.1	ENSG00000250390	39146	None	None
L1FLnI_11q21p	L1	L1	L1FLnI	chr11	95625828	95635851	-	coding	AP000820.2	lncRNA	ANTISENSE	ENSG00000285842	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q21q	L1	L1	L1FLnI	chr11	95802758	95811406	+	coding	CEP57	protein_coding	SENSE	ENSG00000166037	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q21r	L1	L1	L1FLnI	chr11	95870239	95879762	-	coding	MTMR2	protein_coding	SENSE	ENSG00000087053	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q21s	L1	L1	L1FLnI	chr11	96405122	96415165	-	coding	JRKL	protein_coding	ANTISENSE	ENSG00000183340	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q21t	L1	L1	L1FLnI	chr11	96483339	96493612	+	noncoding	JRKL,JRKL-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000183340,ENSG00000255679	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q21u	L1	L1	L1FLnI	chr11	96541506	96551677	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02737	ENSG00000256684	26758	AP003066.1	ENSG00000254587	38640	None	None
L1FLnI_11q21v	L1	L1	L1FLnI	chr11	96552092	96562239	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02737	ENSG00000256684	37344	AP003066.1	ENSG00000254587	28078	None	None
L1FLnI_11q21w	L1	L1	L1FLnI	chr11	96608559	96619000	-	noncoding	AP003066.1	lncRNA	ANTISENSE	ENSG00000254587	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q21x	L1	L1	L1FLnI	chr11	96732967	96742690	-	noncoding	AP003066.1	lncRNA	ANTISENSE	ENSG00000254587	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q21y	L1	L1	L1FLnI	chr11	96771329	96781320	-	coding	AP003066.1	lncRNA	ANTISENSE	ENSG00000254587	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q21z	L1	L1	L1FLnI	chr11	96787003	96797183	-	noncoding	AP003066.1	lncRNA	ANTISENSE	ENSG00000254587	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q21aa	L1	L1	L1FLnI	chr11	97015424	97026734	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MED28P5	ENSG00000255205	14713	AP001836.1	ENSG00000270753	59426	None	None
L1FLnI_11q21ba	L1	L1	L1FLnI	chr11	97015424	97024196	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MED28P5	ENSG00000255205	14713	AP001836.1	ENSG00000270753	61964	None	None
L1FLnI_11q21ca	L1	L1	L1FLnI	chr11	97039662	97049778	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP001836.1	ENSG00000270753	36382	MED28P5	ENSG00000255205	38951	None	None
L1FLnI_11q21da	L1	L1	L1FLnI	chr11	97058678	97067241	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MED28P5	ENSG00000255205	57967	AP001836.1	ENSG00000270753	18919	None	chr11:97059964-97059970
L1FLnI_11q21ea	L1	L1	L1FLnI	chr11	97068176	97077394	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001836.1	ENSG00000270753	8766	MED28P5	ENSG00000255205	67465	None	None
L1FLnI_11q21fa	L1	L1	L1FLnI	chr11	97192144	97202355	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02553	ENSG00000255039	20289	AP001836.1	ENSG00000270753	105462	None	None
L1FLnI_11q21ga	L1	L1	L1FLnI	chr11	97275496	97285642	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02553	ENSG00000255039	15509	RNA5SP347	ENSG00000199315	371822	None	None
L1FLnI_11q21ha	L1	L1	L1FLnI	chr11	97277142	97285642	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02553	ENSG00000255039	17155	RNA5SP347	ENSG00000199315	371822	None	None
L1FLnI_11q22.1a	L1	L1	L1FLnI	chr11	97405245	97413839	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02553	ENSG00000255039	145258	RNA5SP347	ENSG00000199315	243625	None	None
L1FLnI_11q22.1b	L1	L1	L1FLnI	chr11	97585032	97594962	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02553	ENSG00000255039	325045	RNA5SP347	ENSG00000199315	62502	None	None
L1FLnI_11q22.1c	L1	L1	L1FLnI	chr11	97778990	97787506	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02713	ENSG00000255502	90969	RNA5SP347	ENSG00000199315	121408	None	None
L1FLnI_11q22.1d	L1	L1	L1FLnI	chr11	98008590	98019011	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02713	ENSG00000255502	49032	AP001317.1	ENSG00000255380	111228	None	None
L1FLnI_11q22.1e	L1	L1	L1FLnI	chr11	98324383	98334421	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP003038.1	ENSG00000254939	230653	AP001317.1	ENSG00000255380	193185	None	None
L1FLnI_11q22.1f	L1	L1	L1FLnI	chr11	98324399	98334421	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP003038.1	ENSG00000254939	230653	AP001317.1	ENSG00000255380	193201	None	None
L1FLnI_11q22.1g	L1	L1	L1FLnI	chr11	98541647	98551641	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP001317.1	ENSG00000255380	410449	AP003038.1	ENSG00000254939	13433	None	None
L1FLnI_11q22.1h	L1	L1	L1FLnI	chr11	98711934	98722111	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP002428.1	ENSG00000254830	216801	AP003715.1	ENSG00000254599	28199	None	None
L1FLnI_11q22.1i	L1	L1	L1FLnI	chr11	98744418	98754502	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP003715.1	ENSG00000254599	60683	AP002428.1	ENSG00000254830	184410	None	None
L1FLnI_11q22.1j	L1	L1	L1FLnI	chr11	98840811	98849350	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002428.1	ENSG00000254830	89562	AP003715.1	ENSG00000254599	157076	None	None
L1FLnI_11q22.1k	L1	L1	L1FLnI	chr11	98910785	98920279	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002428.1	ENSG00000254830	18633	AP003715.1	ENSG00000254599	227050	None	None
L1FLnI_11q22.1l	L1	L1	L1FLnI	chr11	98987369	98997126	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CNTN5	ENSG00000149972	23823	AP002428.1	ENSG00000254830	42290	None	None
L1FLnI_11q22.1m	L1	L1	L1FLnI	chr11	98992954	99003085	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP002428.1	ENSG00000254830	47875	CNTN5	ENSG00000149972	17864	None	None
L1FLnI_11q22.1n	L1	L1	L1FLnI	chr11	99577337	99587473	-	coding	CNTN5	protein_coding	ANTISENSE	ENSG00000149972	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.1o	L1	L1	L1FLnI	chr11	99577347	99587473	-	coding	CNTN5	protein_coding	ANTISENSE	ENSG00000149972	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.1p	L1	L1	L1FLnI	chr11	99599189	99608613	+	coding	CNTN5	protein_coding	SENSE	ENSG00000149972	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.1q	L1	L1	L1FLnI	chr11	99797812	99807465	-	noncoding	CNTN5	protein_coding	ANTISENSE	ENSG00000149972	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.1r	L1	L1	L1FLnI	chr11	100034469	100044623	-	coding	CNTN5	protein_coding	ANTISENSE	ENSG00000149972	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.1s	L1	L1	L1FLnI	chr11	100253005	100263451	+	noncoding	CNTN5	protein_coding	SENSE	ENSG00000149972	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.1t	L1	L1	L1FLnI	chr11	100276170	100287163	-	noncoding	CNTN5	protein_coding	ANTISENSE	ENSG00000149972	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.1u	L1	L1	L1FLnI	chr11	100282248	100292261	+	coding	CNTN5	protein_coding	SENSE	ENSG00000149972	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.1v	L1	L1	L1FLnI	chr11	100282248	100292251	+	coding	CNTN5	protein_coding	SENSE	ENSG00000149972	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.1w	L1	L1	L1FLnI	chr11	100325491	100335669	+	noncoding	CNTN5	protein_coding	SENSE	ENSG00000149972	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.1x	L1	L1	L1FLnI	chr11	100405543	100415569	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CNTN5	ENSG00000149972	46658	RN7SL222P	ENSG00000242165	226406	None	None
L1FLnI_11q22.1y	L1	L1	L1FLnI	chr11	100448360	100458387	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CNTN5	ENSG00000149972	89475	RN7SL222P	ENSG00000242165	183588	None	None
L1FLnI_11q22.1z	L1	L1	L1FLnI	chr11	100448360	100458419	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CNTN5	ENSG00000149972	89475	RN7SL222P	ENSG00000242165	183556	None	None
L1FLnI_11q22.1aa	L1	L1	L1FLnI	chr11	100475222	100485244	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL222P	ENSG00000242165	156731	CNTN5	ENSG00000149972	116337	None	None
L1FLnI_11q22.1ba	L1	L1	L1FLnI	chr11	100485207	100495314	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CNTN5	ENSG00000149972	126322	RN7SL222P	ENSG00000242165	146661	None	None
L1FLnI_11q22.1ca	L1	L1	L1FLnI	chr11	100649612	100659027	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL222P	ENSG00000242165	7339	PPIAP43	ENSG00000255059	7432	None	None
L1FLnI_11q22.1da	L1	L1	L1FLnI	chr11	100649612	100659021	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL222P	ENSG00000242165	7339	PPIAP43	ENSG00000255059	7438	None	None
L1FLnI_11q22.1ea	L1	L1	L1FLnI	chr11	100895344	100905545	-	coding	ARHGAP42	protein_coding	ANTISENSE	ENSG00000165895	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.1fa	L1	L1	L1FLnI	chr11	101066526	101076971	+	noncoding	PGR	protein_coding	ANTISENSE	ENSG00000082175	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.1ga	L1	L1	L1FLnI	chr11	101291281	101301815	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRPC6	ENSG00000137672	149749	PGR-AS1	ENSG00000282728	81690	None	None
L1FLnI_11q22.1ha	L1	L1	L1FLnI	chr11	101291669	101301815	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRPC6	ENSG00000137672	149749	PGR-AS1	ENSG00000282728	82078	None	None
L1FLnI_11q22.1ia	L1	L1	L1FLnI	chr11	101461510	101470665	-	noncoding	TRPC6	protein_coding	SENSE	ENSG00000137672	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.1ja	L1	L1	L1FLnI	chr11	101563092	101573518	+	noncoding	TRPC6	protein_coding	ANTISENSE	ENSG00000137672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.1ka	L1	L1	L1FLnI	chr11	101635468	101645543	+	noncoding	TRPC6	protein_coding	ANTISENSE	ENSG00000137672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.1la	L1	L1	L1FLnI	chr11	101677919	101688057	-	coding	TRPC6	protein_coding	SENSE	ENSG00000137672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.1ma	L1	L1	L1FLnI	chr11	101848991	101859127	+	coding	TRPC6	protein_coding	ANTISENSE	ENSG00000137672	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.1na	L1	L1	L1FLnI	chr11	102030926	102039470	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CFAP300	ENSG00000137691	7967	CEP126	ENSG00000110318	29864	None	None
L1FLnI_11q22.2a	L1	L1	L1FLnI	chr11	102368668	102378692	-	coding	BIRC2	protein_coding	ANTISENSE	ENSG00000110330	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.2b	L1	L1	L1FLnI	chr11	102435123	102445201	+	noncoding	TMEM123	protein_coding	ANTISENSE	ENSG00000152558	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.2c	L1	L1	L1FLnI	chr11	102740939	102750964	-	coding	WTAPP1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000255282	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.2d	L1	L1	L1FLnI	chr11	102813394	102823873	-	noncoding	WTAPP1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000255282	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3a	L1	L1	L1FLnI	chr11	103135733	103145853	-	coding	DYNC2H1	protein_coding	ANTISENSE	ENSG00000187240	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3b	L1	L1	L1FLnI	chr11	103386001	103396132	-	coding	DYNC2H1	protein_coding	ANTISENSE	ENSG00000187240	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:103394706-103394990	None
L1FLnI_11q22.3c	L1	L1	L1FLnI	chr11	103497915	103507108	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DYNC2H1	ENSG00000187240	18052	AP002989.1	ENSG00000254987	168886	None	None
L1FLnI_11q22.3d	L1	L1	L1FLnI	chr11	103607733	103617951	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DYNC2H1	ENSG00000187240	127870	AP002989.1	ENSG00000254987	58043	None	None
L1FLnI_11q22.3e	L1	L1	L1FLnI	chr11	103814313	103824444	-	noncoding	AP002989.1	lncRNA	SENSE	ENSG00000254987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3f	L1	L1	L1FLnI	chr11	103827388	103836723	+	noncoding	AP002989.1	lncRNA	ANTISENSE	ENSG00000254987	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3g	L1	L1	L1FLnI	chr11	104919706	104929963	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CASP4	ENSG00000196954	12903	CASP17P	ENSG00000235505	633	None	None
L1FLnI_11q22.3h	L1	L1	L1FLnI	chr11	104919713	104929963	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CASP4	ENSG00000196954	12903	CASP17P	ENSG00000235505	640	None	None
L1FLnI_11q22.3i	L1	L1	L1FLnI	chr11	104923277	104933684	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CASP17P	ENSG00000235505	4204	CASP4	ENSG00000196954	9182	None	None
L1FLnI_11q22.3j	L1	L1	L1FLnI	chr11	105012797	105022823	+	coding	CASP5	protein_coding	ANTISENSE	ENSG00000137757	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3k	L1	L1	L1FLnI	chr11	105439282	105448487	+	noncoding	CARD18	protein_coding	ANTISENSE	ENSG00000255501	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3l	L1	L1	L1FLnI	chr11	105722102	105732537	+	noncoding	GRIA4	protein_coding	SENSE	ENSG00000152578	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3m	L1	L1	L1FLnI	chr11	105872434	105882844	-	noncoding	GRIA4	protein_coding	ANTISENSE	ENSG00000152578	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3n	L1	L1	L1FLnI	chr11	106333942	106343155	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP003173.1	ENSG00000287802	122830	AP002001.2	ENSG00000255065	22151	None	None
L1FLnI_11q22.3o	L1	L1	L1FLnI	chr11	106333954	106343155	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP003173.1	ENSG00000287802	122830	AP002001.2	ENSG00000255065	22163	None	None
L1FLnI_11q22.3p	L1	L1	L1FLnI	chr11	106751875	106762135	-	noncoding	GUCY1A2	protein_coding	SENSE	ENSG00000152402	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3q	L1	L1	L1FLnI	chr11	106849714	106859028	-	coding	GUCY1A2	protein_coding	SENSE	ENSG00000152402	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3r	L1	L1	L1FLnI	chr11	107101373	107109930	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GUCY1A2	ENSG00000152402	82849	AP003057.1	ENSG00000255353	66356	None	None
L1FLnI_11q22.3s	L1	L1	L1FLnI	chr11	107116995	107125942	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GUCY1A2	ENSG00000152402	98471	AP003057.1	ENSG00000255353	50344	chr11:107121584-107121630	None
L1FLnI_11q22.3t	L1	L1	L1FLnI	chr11	107290231	107300320	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP003057.1	ENSG00000255353	112701	AP000766.1	ENSG00000261098	11812	None	None
L1ORF2_11q22.3	L1	L1	L1ORF2	chr11	107360810	107368854	+	coding	CWF19L2	protein_coding	ANTISENSE	ENSG00000152404	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3u	L1	L1	L1FLnI	chr11	107369264	107379280	+	coding	CWF19L2	protein_coding	ANTISENSE	ENSG00000152404	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3v	L1	L1	L1FLnI	chr11	107393154	107403759	+	noncoding	CWF19L2,SMARCE1P1	protein_coding,processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000152404,ENSG00000225215	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3w	L1	L1	L1FLnI	chr11	107393154	107403373	+	noncoding	CWF19L2	protein_coding	ANTISENSE	ENSG00000152404	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3x	L1	L1	L1FLnI	chr11	107460041	107470420	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ALKBH8	ENSG00000137760	32306	CWF19L2	ENSG00000152404	2197	None	None
L1FLnI_11q22.3y	L1	L1	L1FLnI	chr11	107460045	107470420	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ALKBH8	ENSG00000137760	32306	CWF19L2	ENSG00000152404	2201	None	None
L1FLnI_11q22.3z	L1	L1	L1FLnI	chr11	108257128	108267143	+	coding	ATM	protein_coding	SENSE	ENSG00000149311	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3aa	L1	L1	L1FLnI	chr11	108353433	108363467	+	coding	ATM,C11orf65	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000149311,ENSG00000166323	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3ba	L1	L1	L1FLnI	chr11	108370038	108380136	+	coding	C11orf65	protein_coding	ANTISENSE	ENSG00000166323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3ca	L1	L1	L1FLnI	chr11	108441121	108451284	+	noncoding	C11orf65	protein_coding	ANTISENSE	ENSG00000166323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3da	L1	L1	L1FLnI	chr11	108442566	108451284	+	noncoding	C11orf65	protein_coding	ANTISENSE	ENSG00000166323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3ea	L1	L1	L1FLnI	chr11	108996111	109005506	-	noncoding	AP003123.1	lncRNA	SENSE	ENSG00000255528	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3fa	L1	L1	L1FLnI	chr11	109077581	109087721	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP349	ENSG00000200613	33157	AP003123.1	ENSG00000255528	39614	None	None
L1FLI_11q22.3	L1	L1	L1FLI	chr11	109176482	109184528	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP004146.1	ENSG00000264997	78966	RNA5SP349	ENSG00000200613	55496	None	None
L1FLnI_11q22.3ga	L1	L1	L1FLnI	chr11	109188145	109196962	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP004146.1	ENSG00000264997	66532	RNA5SP349	ENSG00000200613	67159	None	None
L1FLnI_11q22.3ha	L1	L1	L1FLnI	chr11	109215194	109224956	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP004146.1	ENSG00000264997	38538	RNA5SP349	ENSG00000200613	94208	None	None
L1FLnI_11q22.3ia	L1	L1	L1FLnI	chr11	109276041	109285848	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003049.2	ENSG00000255028	69237	AP004146.1	ENSG00000264997	12477	None	None
L1FLnI_11q22.3ja	L1	L1	L1FLnI	chr11	109561237	109569882	-	noncoding	AP003049.2	lncRNA	SENSE	ENSG00000255028	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3ka	L1	L1	L1FLnI	chr11	109568334	109577559	+	coding	AP003049.2	lncRNA	ANTISENSE	ENSG00000255028	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3la	L1	L1	L1FLnI	chr11	109630662	109640502	-	noncoding	AP003102.1	processed_pseudogene	SENSE	ENSG00000254482	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3ma	L1	L1	L1FLnI	chr11	109692145	109703138	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003102.1	ENSG00000254482	54017	LINC02715	ENSG00000254659	38487	chr11:109698884-109699218	None
L1FLnI_11q22.3na	L1	L1	L1FLnI	chr11	109692145	109701345	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003102.1	ENSG00000254482	54017	LINC02715	ENSG00000254659	40280	chr11:109698884-109699218	None
L1FLnI_11q22.3oa	L1	L1	L1FLnI	chr11	110205488	110215501	+	coding	RDX	protein_coding	ANTISENSE	ENSG00000137710	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3pa	L1	L1	L1FLnI	chr11	110382312	110392412	-	coding	LINC02732	lncRNA	ANTISENSE	ENSG00000254416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q22.3qa	L1	L1	L1FLnI	chr11	110538437	110549035	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FDX1	ENSG00000137714	73553	ARHGAP20	ENSG00000137727	28007	None	None
L1FLnI_11q23.1a	L1	L1	L1FLnI	chr11	110748399	110757269	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA1P60	ENSG00000233497	30757	ARHGAP20	ENSG00000137727	35210	None	None
L1FLnI_11q23.1b	L1	L1	L1FLnI	chr11	112002436	112012465	+	noncoding	DIXDC1	protein_coding	SENSE	ENSG00000150764	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q23.1c	L1	L1	L1FLnI	chr11	112326054	112334651	-	noncoding	LINC02762	lncRNA	ANTISENSE	ENSG00000250303	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q23.1d	L1	L1	L1FLnI	chr11	112678057	112688069	-	coding	AP003100.2	lncRNA	ANTISENSE	ENSG00000285769	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q23.1e	L1	L1	L1FLnI	chr11	112678073	112688069	-	coding	AP003100.2	lncRNA	ANTISENSE	ENSG00000285769	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q23.2a	L1	L1	L1FLnI	chr11	112983273	112992251	-	noncoding	NCAM1	protein_coding	ANTISENSE	ENSG00000149294	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q23.2b	L1	L1	L1FLnI	chr11	113220449	113230594	+	noncoding	NCAM1	protein_coding	SENSE	ENSG00000149294	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q23.2c	L1	L1	L1FLnI	chr11	113351951	113362559	-	noncoding	TTC12	protein_coding	ANTISENSE	ENSG00000149292	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q23.2d	L1	L1	L1FLnI	chr11	113351970	113362559	-	noncoding	TTC12	protein_coding	ANTISENSE	ENSG00000149292	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q23.2e	L1	L1	L1FLnI	chr11	113653108	113663257	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	DRD2	ENSG00000149295	177417	TMPRSS5	ENSG00000166682	24290	None	None
L1FLnI_11q23.2f	L1	L1	L1FLnI	chr11	114500332	114510437	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP002373.2	ENSG00000256533	46209	NXPE2P1	ENSG00000255982	2269	chr11:114507245-114507258	None
L1FLnI_11q23.2g	L1	L1	L1FLnI	chr11	114529803	114539946	+	coding	NXPE1	protein_coding	ANTISENSE	ENSG00000095110	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q23.2h	L1	L1	L1FLnI	chr11	114568448	114577485	+	noncoding	NXPE4	protein_coding	ANTISENSE	ENSG00000137634	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q23.3a	L1	L1	L1FLnI	chr11	114622165	114632183	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NXPE4	ENSG00000137634	26379	NXPE2	ENSG00000204361	46344	None	None
L1FLnI_11q23.3b	L1	L1	L1FLnI	chr11	114632967	114643120	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NXPE2	ENSG00000204361	35407	NXPE4	ENSG00000137634	37181	None	None
L1FLnI_11q23.3c	L1	L1	L1FLnI	chr11	114685617	114694990	-	noncoding	NXPE2	protein_coding	ANTISENSE	ENSG00000204361	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q23.3d	L1	L1	L1FLnI	chr11	114801726	114811848	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NXPE2	ENSG00000204361	94657	AP003179.1	ENSG00000252870	316370	None	None
L1FLnI_11q23.3e	L1	L1	L1FLnI	chr11	115963435	115973616	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP000797.1	ENSG00000239600	11944	LINC02151	ENSG00000236437	523283	None	None
L1FLnI_11q23.3f	L1	L1	L1FLnI	chr11	116001429	116011556	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP000797.1	ENSG00000239600	49938	LINC02151	ENSG00000236437	485343	None	None
L1FLnI_11q23.3g	L1	L1	L1FLnI	chr11	116019790	116030263	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP000797.1	ENSG00000239600	68299	LINC02151	ENSG00000236437	466636	None	None
L1FLnI_11q23.3h	L1	L1	L1FLnI	chr11	116567329	116576773	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02151	ENSG00000236437	66699	AP000770.1	ENSG00000278945	33222	None	None
L1FLnI_11q23.3i	L1	L1	L1FLnI	chr11	116567329	116576772	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02151	ENSG00000236437	66699	AP000770.1	ENSG00000278945	33223	None	None
L1FLnI_11q23.3j	L1	L1	L1FLnI	chr11	116663220	116673362	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02702	ENSG00000237937	4925	BUD13	ENSG00000137656	74808	None	None
L1FLnI_11q23.3k	L1	L1	L1FLnI	chr11	119462448	119472467	-	noncoding	USP2-AS1	lncRNA	ANTISENSE	ENSG00000245248	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q23.3l	L1	L1	L1FLnI	chr11	120759950	120770409	-	coding	GRIK4	protein_coding	ANTISENSE	ENSG00000149403	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q23.3m	L1	L1	L1FLnI	chr11	121171689	121181825	-	coding	TECTA	protein_coding	ANTISENSE	ENSG00000109927	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q23.3n	L1	L1	L1FLnI	chr11	121274518	121283478	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SC5D	ENSG00000109929	9203	RPS4XP12	ENSG00000244400	23540	chr11:121283093-121283199	None
L1FLnI_11q24.1a	L1	L1	L1FLnI	chr11	121829348	121839022	+	noncoding	AP001977.1	lncRNA	SENSE	ENSG00000286044	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr11:121829137-121829579	None
L1FLnI_11q24.1b	L1	L1	L1FLnI	chr11	122457726	122468626	+	noncoding	MIR100HG	lncRNA	ANTISENSE	ENSG00000255248	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q24.1c	L1	L1	L1FLnI	chr11	122541041	122550026	-	noncoding	MIR100HG	lncRNA	SENSE	ENSG00000255248	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q24.1d	L1	L1	L1FLnI	chr11	123823662	123833853	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR6M2P	ENSG00000254613	5182	OR6M1	ENSG00000196099	17275	None	None
L1FLnI_11q24.1e	L1	L1	L1FLnI	chr11	123906721	123918218	+	noncoding	OR8D4	protein_coding	SENSE	ENSG00000181518	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q24.1f	L1	L1	L1FLnI	chr11	123979723	123988848	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR10G6	ENSG00000198674	5315	OR10S1	ENSG00000196248	1942	None	None
L1FLnI_11q24.2a	L1	L1	L1FLnI	chr11	124962150	124972293	-	coding	CCDC15	protein_coding	ANTISENSE	ENSG00000149548	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q24.2b	L1	L1	L1FLnI	chr11	125533111	125543140	+	coding	FEZ1	protein_coding	ANTISENSE	ENSG00000149557	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q24.2c	L1	L1	L1FLnI	chr11	125701769	125711631	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ACRV1	ENSG00000134940	20895	PATE1	ENSG00000171053	34648	None	None
L1FLnI_11q24.2d	L1	L1	L1FLnI	chr11	125701769	125711634	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ACRV1	ENSG00000134940	20895	PATE1	ENSG00000171053	34645	None	None
L1FLnI_11q24.2e	L1	L1	L1FLnI	chr11	125711007	125721150	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PATE1	ENSG00000171053	25129	ACRV1	ENSG00000134940	30133	None	None
L1FLnI_11q24.2f	L1	L1	L1FLnI	chr11	125752123	125761659	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PATE1	ENSG00000171053	2256	PATE2	ENSG00000196844	14454	None	None
L1FLnI_11q24.2g	L1	L1	L1FLnI	chr11	125810177	125820792	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PATE4	ENSG00000237353	12524	PATE3	ENSG00000236027	18577	chr11:125813959-125814023	None
L1FLnI_11q24.2h	L1	L1	L1FLnI	chr11	125814153	125824601	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PATE3	ENSG00000236027	22553	PATE4	ENSG00000237353	8715	None	None
L1FLnI_11q24.2i	L1	L1	L1FLnI	chr11	125853853	125862716	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PATE4	ENSG00000237353	13781	AP000842.3	ENSG00000260209	10315	None	chr11:125854821-125854827
L1FLnI_11q24.2j	L1	L1	L1FLnI	chr11	127201697	127210350	+	noncoding	AP003121.1	lncRNA	SENSE	ENSG00000272642	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q24.2k	L1	L1	L1FLnI	chr11	127286272	127295397	+	noncoding	LINC02712	lncRNA	SENSE	ENSG00000273409	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q24.2l	L1	L1	L1FLnI	chr11	127359663	127369688	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02712	ENSG00000273409	22630	RN7SKP121	ENSG00000222774	36340	None	None
L1FLnI_11q24.2m	L1	L1	L1FLnI	chr11	127359663	127369719	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02712	ENSG00000273409	22630	RN7SKP121	ENSG00000222774	36309	None	None
L1FLnI_11q24.2n	L1	L1	L1FLnI	chr11	127416854	127427367	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP003532.1	ENSG00000254591	230201	RN7SKP279	ENSG00000223315	8706	None	None
L1FLnI_11q24.2o	L1	L1	L1FLnI	chr11	127701511	127710100	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001000.1	ENSG00000254612	230813	AP003532.1	ENSG00000254591	43634	None	None
L1FLnI_11q24.2p	L1	L1	L1FLnI	chr11	127776197	127786218	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP001000.1	ENSG00000254612	154695	AP003532.1	ENSG00000254591	118320	None	None
L1FLnI_11q24.2q	L1	L1	L1FLnI	chr11	127826506	127835356	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP003532.1	ENSG00000254591	168629	AP001000.1	ENSG00000254612	105557	None	None
L1FLnI_11q24.3a	L1	L1	L1FLnI	chr11	128002673	128011874	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP001000.1	ENSG00000254612	61019	LINC02725	ENSG00000273415	83884	None	chr11:128005831-128005836
L1FLnI_11q24.3b	L1	L1	L1FLnI	chr11	128081497	128090637	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02725	ENSG00000273415	5121	AP001000.1	ENSG00000254612	139843	None	None
L1FLnI_11q24.3c	L1	L1	L1FLnI	chr11	128104360	128113390	+	coding	LINC02725	lncRNA	SENSE	ENSG00000273415	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q24.3d	L1	L1	L1FLnI	chr11	128136559	128146714	+	coding	LINC02725	lncRNA	SENSE	ENSG00000273415	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q24.3e	L1	L1	L1FLnI	chr11	128633081	128643947	+	noncoding	AP001122.1	lncRNA	ANTISENSE	ENSG00000245008	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q24.3f	L1	L1	L1FLnI	chr11	129002597	129011817	-	noncoding	ARHGAP32	protein_coding	SENSE	ENSG00000134909	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q24.3g	L1	L1	L1FLnI	chr11	129075294	129084223	+	noncoding	ARHGAP32	protein_coding	ANTISENSE	ENSG00000134909	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:129077304-129077619	chr11:129077472-129077482
L1FLnI_11q24.3h	L1	L1	L1FLnI	chr11	129144587	129155384	+	noncoding	ARHGAP32	protein_coding	ANTISENSE	ENSG00000134909	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q24.3i	L1	L1	L1FLnI	chr11	129152276	129162805	+	coding	ARHGAP32	protein_coding	ANTISENSE	ENSG00000134909	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q24.3j	L1	L1	L1FLnI	chr11	129170433	129180456	+	coding	ARHGAP32	protein_coding	ANTISENSE	ENSG00000134909	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q24.3k	L1	L1	L1FLnI	chr11	129338417	129348402	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	BARX2	ENSG00000043039	27446	ZNF123P	ENSG00000255259	41936	None	None
L1FLnI_11q24.3l	L1	L1	L1FLnI	chr11	129463255	129472873	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BARX2	ENSG00000043039	10976	RPS27P20	ENSG00000240121	64996	None	None
L1FLnI_11q24.3m	L1	L1	L1FLnI	chr11	129489986	129500097	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BARX2	ENSG00000043039	37707	RPS27P20	ENSG00000240121	37772	None	None
L1FLnI_11q24.3n	L1	L1	L1FLnI	chr11	129553591	129563850	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS27P20	ENSG00000240121	15477	AP003500.1	ENSG00000281386	27643	None	None
L1FLnI_11q24.3o	L1	L1	L1FLnI	chr11	129555139	129563850	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS27P20	ENSG00000240121	17025	AP003500.1	ENSG00000281386	27643	None	None
L1FLnI_11q24.3p	L1	L1	L1FLnI	chr11	129709050	129719161	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01395	ENSG00000281097	91781	AP003327.2	ENSG00000287426	42552	None	None
L1FLnI_11q24.3q	L1	L1	L1FLnI	chr11	129799487	129809092	+	noncoding	AP003327.2	lncRNA	ANTISENSE	ENSG00000287426	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q25a	L1	L1	L1FLnI	chr11	130958092	130968741	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL167P	ENSG00000242673	35387	SNX19	ENSG00000120451	41583	None	None
L1FLnI_11q25b	L1	L1	L1FLnI	chr11	130980765	130990792	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SNX19	ENSG00000120451	64256	RN7SL167P	ENSG00000242673	13336	None	None
L1FLnI_11q25c	L1	L1	L1FLnI	chr11	131267286	131276975	-	noncoding	AP002856.2	lncRNA	ANTISENSE	ENSG00000231698	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q25d	L1	L1	L1FLnI	chr11	131309497	131319178	+	noncoding	AP002856.2	lncRNA	SENSE	ENSG00000231698	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q25e	L1	L1	L1FLnI	chr11	131433313	131443441	-	coding	NTM	protein_coding	ANTISENSE	ENSG00000182667	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr11:131439958-131439962
L1FLnI_11q25f	L1	L1	L1FLnI	chr11	132316662	132326683	+	noncoding	NTM	protein_coding	SENSE	ENSG00000182667	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q25g	L1	L1	L1FLnI	chr11	132379921	132390064	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NTM	ENSG00000182667	43099	AP000843.1	ENSG00000279090	13296	None	None
L1FLnI_11q25h	L1	L1	L1FLnI	chr11	132475523	132485581	+	coding	OPCML	protein_coding	ANTISENSE	ENSG00000183715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q25i	L1	L1	L1FLnI	chr11	132475523	132485563	+	coding	OPCML	protein_coding	ANTISENSE	ENSG00000183715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q25j	L1	L1	L1FLnI	chr11	132570940	132580289	-	noncoding	OPCML	protein_coding	SENSE	ENSG00000183715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q25k	L1	L1	L1FLnI	chr11	132756282	132766777	-	coding	OPCML	protein_coding	SENSE	ENSG00000183715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q25l	L1	L1	L1FLnI	chr11	133637305	133647328	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP004606.1	ENSG00000287068	87439	LINC02743	ENSG00000255258	136343	None	None
L1FLnI_11q25m	L1	L1	L1FLnI	chr11	133847904	133856491	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001979.1	ENSG00000213153	8386	SPATA19	ENSG00000166118	2366	chr11:133854504-133854792	chr11:133855147-133855158
L1FLnI_11q25n	L1	L1	L1FLnI	chr11	133878606	133889206	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	IGSF9B	ENSG00000080854	7232	AP001979.1	ENSG00000213153	12979	None	None
L1FLnI_11q25o	L1	L1	L1FLnI	chr11	133878622	133889206	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	IGSF9B	ENSG00000080854	7232	AP001979.1	ENSG00000213153	12995	None	None
L1FLnI_11q25p	L1	L1	L1FLnI	chr11	134098698	134107983	+	coding	JAM3	protein_coding	SENSE	ENSG00000166086	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr11:134099270-134099424	None
L1FLnI_11q25q	L1	L1	L1FLnI	chr11	134491786	134501161	-	noncoding	AP004608.1	lncRNA	ANTISENSE	ENSG00000255545	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_11q25r	L1	L1	L1FLnI	chr11	134491802	134501161	-	noncoding	AP004608.1	lncRNA	ANTISENSE	ENSG00000255545	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p13.33a	L1	L1	L1FLnI	chr12	294482	304163	+	coding	KDM5A	protein_coding	ANTISENSE	ENSG00000073614	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p13.33b	L1	L1	L1FLnI	chr12	339308	349418	+	noncoding	KDM5A	protein_coding	ANTISENSE	ENSG00000073614	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p13.33c	L1	L1	L1FLnI	chr12	370114	380218	-	coding	KDM5A	protein_coding	SENSE	ENSG00000073614	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p13.33d	L1	L1	L1FLnI	chr12	2129805	2139821	-	coding	CACNA1C	protein_coding	ANTISENSE	ENSG00000151067	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p13.33e	L1	L1	L1FLnI	chr12	2695999	2706142	+	coding	CACNA1C,ITFG2-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000151067,ENSG00000256150	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p13.32a	L1	L1	L1FLnI	chr12	3391716	3401733	-	coding	PRMT8	protein_coding	ANTISENSE	ENSG00000111218	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p13.32b	L1	L1	L1FLnI	chr12	3498697	3508728	-	coding	PRMT8	protein_coding	ANTISENSE	ENSG00000111218	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p13.32c	L1	L1	L1FLnI	chr12	3687966	3696986	-	noncoding	CRACR2A	protein_coding	SENSE	ENSG00000130038	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr12:3692205-3692533	None
L1FLnI_12p13.32d	L1	L1	L1FLnI	chr12	3847637	3857778	+	noncoding	PARP11	protein_coding	ANTISENSE	ENSG00000111224	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p13.32e	L1	L1	L1FLnI	chr12	4337876	4347260	+	coding	AC008012.1,TIGAR	protein_coding,protein_coding	SENSE,SENSE	ENSG00000285901,ENSG00000078237	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p13.32f	L1	L1	L1FLnI	chr12	4505397	4515401	+	coding	C12orf4	protein_coding	ANTISENSE	ENSG00000047621	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p13.32g	L1	L1	L1FLnI	chr12	4668448	4678793	+	coding	NDUFA9,AC005833.1	protein_coding,protein_coding	SENSE,SENSE	ENSG00000139180,ENSG00000255639	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p13.32h	L1	L1	L1FLnI	chr12	4750364	4759178	-	noncoding	AC005833.1,GALNT8	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000255639,ENSG00000130035	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p13.32i	L1	L1	L1FLnI	chr12	5115928	5125928	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02443	ENSG00000256115	100268	AC005906.3	ENSG00000285523	23186	None	None
L1FLnI_12p13.32j	L1	L1	L1FLnI	chr12	5284442	5294458	-	coding	AC006206.2	lncRNA	ANTISENSE	ENSG00000256417	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p13.31a	L1	L1	L1FLnI	chr12	7247633	7257763	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC018653.2	ENSG00000256480	6647	ACSM4	ENSG00000215009	46521	None	chr12:7249171-7249184
L1FLnI_12p13.31b	L1	L1	L1FLnI	chr12	7378810	7387909	+	noncoding	CD163L1	protein_coding	ANTISENSE	ENSG00000177675	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p13.31c	L1	L1	L1FLnI	chr12	7468108	7478267	+	noncoding	CD163L1,CD163	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000177675,ENSG00000177575	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr12:7469666-7469676
L1FLnI_12p13.31d	L1	L1	L1FLnI	chr12	7521395	7531715	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP31	ENSG00000235868	34654	CD163	ENSG00000177575	17502	None	None
L1FLnI_12p13.31e	L1	L1	L1FLnI	chr12	7525452	7534418	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CD163	ENSG00000177575	21559	GAPDHP31	ENSG00000235868	31951	None	None
L1FLnI_12p13.31f	L1	L1	L1FLnI	chr12	7547219	7555834	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CD163	ENSG00000177575	43326	GAPDHP31	ENSG00000235868	10535	chr12:7555636-7556058	None
L1FLnI_12p13.31g	L1	L1	L1FLnI	chr12	7590431	7600841	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP31	ENSG00000235868	23049	NIFKP3	ENSG00000256331	3509	None	None
L1FLnI_12p13.31h	L1	L1	L1FLnI	chr12	8148453	8157111	-	noncoding	AC092111.3,ZNF705A	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000284393,ENSG00000196946	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chr12:8155151-8155325,chr12:8156272-8156657	chr12:8156527-8156538,chr12:8156921-8156936,chr12:8156940-8156952,chr12:8156968-8156995
L1FLnI_12p13.31i	L1	L1	L1FLnI	chr12	8300570	8310682	-	coding	AC092745.5,ENPP7P5,LINC00937	lncRNA,unprocessed_pseudogene,lncRNA	ANTISENSE,SENSE,SENSE	ENSG00000286895,ENSG00000256589,ENSG00000226091	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p13.31j	L1	L1	L1FLnI	chr12	8522257	8531603	-	coding	CLEC4D	protein_coding	ANTISENSE	ENSG00000166527	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p13.31k	L1	L1	L1FLnI	chr12	9166510	9176975	+	noncoding	PZP	protein_coding	ANTISENSE	ENSG00000126838	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr12:9167567-9167569,chr12:9171229-9171234,chr12:9173640-9173643
L1FLnI_12p13.31l	L1	L1	L1FLnI	chr12	9521032	9531073	-	coding	AC092821.4,AC092821.2	lncRNA,transcribed_unprocessed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000284634,ENSG00000214776	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p13.31m	L1	L1	L1FLnI	chr12	9521054	9531073	-	coding	AC092821.4,AC092821.2	lncRNA,transcribed_unprocessed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000284634,ENSG00000214776	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p13.31n	L1	L1	L1FLnI	chr12	9606855	9615606	+	coding	AC092821.4,KLRB1	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000284634,ENSG00000111796	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:9607903-9607924
L1FLnI_12p13.31o	L1	L1	L1FLnI	chr12	9626800	9636886	-	coding	AC092821.4	lncRNA	ANTISENSE	ENSG00000284634	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr12:9636199-9636476	None
L1FLnI_12p13.31p	L1	L1	L1FLnI	chr12	9844676	9853542	-	coding	KLRF1,CLEC2B	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000150045,ENSG00000110852	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr12:9852483-9852884	None
L1FLnI_12p13.2a	L1	L1	L1FLnI	chr12	10343947	10353353	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02598	ENSG00000256155	5111	LINC02617	ENSG00000256288	5655	None	None
L1FLnI_12p13.2b	L1	L1	L1FLnI	chr12	10343960	10353353	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02598	ENSG00000256155	5111	LINC02617	ENSG00000256288	5668	None	None
L1FLnI_12p13.2c	L1	L1	L1FLnI	chr12	10477873	10488325	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KLRC1	ENSG00000134545	23188	EIF2S3B	ENSG00000180574	17277	None	None
L1FLnI_12p13.2d	L1	L1	L1FLnI	chr12	11104869	11115161	+	coding	PRH1,AC018630.2,TAS2R14	protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000231887,ENSG00000275778,ENSG00000212127	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr12:11105895-11105913	None
L1FLnI_12p13.2e	L1	L1	L1FLnI	chr12	11214724	11223827	+	noncoding	AC244131.2	lncRNA	SENSE	ENSG00000275119	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p13.2f	L1	L1	L1FLnI	chr12	11252567	11262311	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC244131.2	ENSG00000275119	1178	PRB3	ENSG00000197870	3613	None	None
L1FLnI_12p13.2g	L1	L1	L1FLnI	chr12	11286738	11296861	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PRB3	ENSG00000197870	16933	PRB4	ENSG00000230657	10220	None	None
L1FLnI_12p13.2h	L1	L1	L1FLnI	chr12	11294158	11304185	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PRB3	ENSG00000197870	24353	PRB4	ENSG00000230657	2896	None	None
L1FLnI_12p13.2i	L1	L1	L1FLnI	chr12	11311341	11320874	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PRB4	ENSG00000230657	905	PRB1	ENSG00000251655	30949	None	None
L1FLnI_12p13.2j	L1	L1	L1FLnI	chr12	11333915	11344050	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRB1	ENSG00000251655	7773	PRB4	ENSG00000230657	23479	chr12:11334032-11334397	None
L1FLnI_12p13.2k	L1	L1	L1FLnI	chr12	11373699	11383818	+	coding	PRB1	protein_coding	ANTISENSE	ENSG00000251655	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p13.2l	L1	L1	L1FLnI	chr12	11412714	11422643	+	noncoding	PRB2,AC078950.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000121335,ENSG00000255790	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p13.2m	L1	L1	L1FLnI	chr12	11905651	11915816	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ETV6	ENSG00000139083	10274	BCL2L14	ENSG00000121380	134028	None	None
L1FLnI_12p13.1a	L1	L1	L1FLnI	chr12	13391076	13401132	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GRIN2B	ENSG00000273079	36810	LINC01559	ENSG00000180861	3909	None	None
L1FLnI_12p13.1b	L1	L1	L1FLnI	chr12	13391108	13401132	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GRIN2B	ENSG00000273079	36810	LINC01559	ENSG00000180861	3941	None	None
L1FLnI_12p13.1c	L1	L1	L1FLnI	chr12	13406580	13416749	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01559	ENSG00000180861	19413	GRIN2B	ENSG00000273079	21193	None	None
L1FLnI_12p13.1d	L1	L1	L1FLnI	chr12	13510643	13520042	-	noncoding	GRIN2B	protein_coding	SENSE	ENSG00000273079	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p13.1e	L1	L1	L1FLnI	chr12	14002167	14011087	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092470.1	ENSG00000256346	158659	GRIN2B	ENSG00000273079	20210	None	None
L1FLnI_12p13.1f	L1	L1	L1FLnI	chr12	14031977	14042416	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GRIN2B	ENSG00000273079	50020	AC092470.1	ENSG00000256346	127330	None	None
L1FLnI_12p13.1g	L1	L1	L1FLnI	chr12	14076561	14086061	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GRIN2B	ENSG00000273079	94604	AC092470.1	ENSG00000256346	83685	None	None
L1FLnI_12p13.1h	L1	L1	L1FLnI	chr12	14097648	14106187	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GRIN2B	ENSG00000273079	115691	AC092470.1	ENSG00000256346	63559	None	chr12:14100101-14100105
L1FLnI_12p12.3a	L1	L1	L1FLnI	chr12	14861188	14870984	-	noncoding	C12orf60	protein_coding	ANTISENSE	ENSG00000182993	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.3b	L1	L1	L1FLnI	chr12	15023768	15033033	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RERG	ENSG00000134533	74750	LINC01489	ENSG00000255727	16769	chr12:15023805-15024092	None
L1FLnI_12p12.3c	L1	L1	L1FLnI	chr12	15060194	15069734	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RERG	ENSG00000134533	38049	LINC01489	ENSG00000255727	53195	None	None
L1FLnI_12p12.3d	L1	L1	L1FLnI	chr12	15060286	15069734	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RERG	ENSG00000134533	38049	LINC01489	ENSG00000255727	53287	None	None
L1FLnI_12p12.3e	L1	L1	L1FLnI	chr12	15943207	15953337	-	coding	DERA	protein_coding	ANTISENSE	ENSG00000023697	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.3f	L1	L1	L1FLnI	chr12	15943231	15953337	-	coding	DERA	protein_coding	ANTISENSE	ENSG00000023697	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.3g	L1	L1	L1FLnI	chr12	16376647	16386792	-	coding	MGST1	protein_coding	ANTISENSE	ENSG00000008394	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.3h	L1	L1	L1FLnI	chr12	16768534	16777062	-	noncoding	AC007529.2	lncRNA	ANTISENSE	ENSG00000283240	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.3i	L1	L1	L1FLnI	chr12	16913931	16922472	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023512.1	ENSG00000256211	66654	AC007529.2	ENSG00000283240	125556	None	None
L1FLnI_12p12.3j	L1	L1	L1FLnI	chr12	16994820	17004969	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	EEF1A1P16	ENSG00000213235	2737	AC092793.1	ENSG00000287455	61399	None	None
L1FLnI_12p12.3k	L1	L1	L1FLnI	chr12	17112821	17121503	+	noncoding	AC092110.1	lncRNA	ANTISENSE	ENSG00000285724	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.3l	L1	L1	L1FLnI	chr12	17316823	17326502	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSMC1P8	ENSG00000256896	56850	AC092110.1	ENSG00000285724	149033	None	None
L1FLnI_12p12.3m	L1	L1	L1FLnI	chr12	17317470	17326502	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PSMC1P8	ENSG00000256896	56850	AC092110.1	ENSG00000285724	149680	None	None
L1FLnI_12p12.3n	L1	L1	L1FLnI	chr12	17558610	17568409	-	noncoding	AC048352.1,LINC02378	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000256389,ENSG00000256994	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.3o	L1	L1	L1FLnI	chr12	17622074	17632196	-	coding	AC048352.1	lncRNA	ANTISENSE	ENSG00000256389	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.3p	L1	L1	L1FLnI	chr12	17698880	17709044	-	coding	AC048352.1	lncRNA	ANTISENSE	ENSG00000256389	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.3q	L1	L1	L1FLnI	chr12	17698880	17708494	-	coding	AC048352.1	lncRNA	ANTISENSE	ENSG00000256389	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.3r	L1	L1	L1FLnI	chr12	17767862	17777889	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RERGL	ENSG00000111404	302980	AC087321.1	ENSG00000206662	56816	None	None
L1FLnI_12p12.3s	L1	L1	L1FLnI	chr12	17852070	17862065	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC087321.1	ENSG00000206662	141024	RERGL	ENSG00000111404	218804	None	None
L1FLnI_12p12.3t	L1	L1	L1FLnI	chr12	17961088	17971466	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RERGL	ENSG00000111404	109403	AC087321.1	ENSG00000206662	250042	None	None
L1FLnI_12p12.3u	L1	L1	L1FLnI	chr12	18020301	18030414	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC087321.1	ENSG00000206662	309255	RERGL	ENSG00000111404	50455	None	None
L1FLnI_12p12.3v	L1	L1	L1FLnI	chr12	18580821	18589700	+	noncoding	PIK3C2G	protein_coding	SENSE	ENSG00000139144	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.3w	L1	L1	L1FLnI	chr12	18621430	18631035	-	noncoding	PIK3C2G	protein_coding	ANTISENSE	ENSG00000139144	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr12:18629755-18629756
L1FLnI_12p12.3x	L1	L1	L1FLnI	chr12	18757154	18767506	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CAPZA3	ENSG00000177938	17966	RPL7P6	ENSG00000227525	321645	None	None
L1FLnI_12p12.3y	L1	L1	L1FLnI	chr12	18781713	18791871	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CAPZA3	ENSG00000177938	42525	RPL7P6	ENSG00000227525	297280	None	None
L1FLnI_12p12.3z	L1	L1	L1FLnI	chr12	18839130	18847744	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P6	ENSG00000227525	241407	CAPZA3	ENSG00000177938	99942	None	None
L1FLnI_12p12.3aa	L1	L1	L1FLnI	chr12	18889762	18900172	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P6	ENSG00000227525	188979	CAPZA3	ENSG00000177938	150574	chr12:18896028-18896304	None
L1FLnI_12p12.3ba	L1	L1	L1FLnI	chr12	18958290	18969153	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P6	ENSG00000227525	119998	CAPZA3	ENSG00000177938	219102	chr12:18967142-18967217	None
L1FLnI_12p12.3ca	L1	L1	L1FLnI	chr12	19676367	19685701	-	noncoding	AEBP2	protein_coding	ANTISENSE	ENSG00000139154	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.3da	L1	L1	L1FLnI	chr12	19696715	19707396	+	coding	AEBP2	protein_coding	SENSE	ENSG00000139154	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.3ea	L1	L1	L1FLnI	chr12	19728191	19738344	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC024901.1	ENSG00000255910	37107	RNU1-146P	ENSG00000200885	3592	None	None
L1FLnI_12p12.3fa	L1	L1	L1FLnI	chr12	19728204	19738344	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC024901.1	ENSG00000255910	37107	RNU1-146P	ENSG00000200885	3605	None	None
L1FLnI_12p12.3ga	L1	L1	L1FLnI	chr12	19775728	19784267	-	noncoding	AC024901.1	lncRNA	ANTISENSE	ENSG00000255910	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr12:19779531-19779662	None
L1FLnI_12p12.2a	L1	L1	L1FLnI	chr12	20062983	20073365	+	coding	LINC02398	lncRNA	SENSE	ENSG00000256287	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.2b	L1	L1	L1FLnI	chr12	20064240	20073365	+	coding	LINC02398	lncRNA	SENSE	ENSG00000256287	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.2c	L1	L1	L1FLnI	chr12	20292739	20302990	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC129102.1	ENSG00000256879	58742	LINC02468	ENSG00000256499	156576	None	chr12:20300700-20300735
L1FLnI_12p12.2d	L1	L1	L1FLnI	chr12	20330558	20340592	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC129102.1	ENSG00000256879	21140	LINC02468	ENSG00000256499	194395	None	None
L1FLnI_12p12.2e	L1	L1	L1FLnI	chr12	20664337	20674359	+	coding	PDE3A	protein_coding	SENSE	ENSG00000172572	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.2f	L1	L1	L1FLnI	chr12	20765562	20775603	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLCO1C1	ENSG00000139155	12176	SLCO1B3	ENSG00000111700	35099	None	None
L1FLnI_12p12.2g	L1	L1	L1FLnI	chr12	20948387	20957742	+	noncoding	SLCO1B3-SLCO1B7	protein_coding	SENSE	ENSG00000257046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.2h	L1	L1	L1FLnI	chr12	20975105	20985364	-	noncoding	SLCO1B3-SLCO1B7,SLCO1B7	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000257046,ENSG00000205754	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.2i	L1	L1	L1FLnI	chr12	21067549	21077594	-	noncoding	SLCO1B3-SLCO1B7,SLCO1B7,AC022335.1	protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000257046,ENSG00000205754,ENSG00000257062	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.2j	L1	L1	L1FLnI	chr12	21083301	21092113	-	coding	SLCO1B3-SLCO1B7,SLCO1B7,AC022335.1	protein_coding,protein_coding,protein_coding	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000257046,ENSG00000205754,ENSG00000257062	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.1a	L1	L1	L1FLnI	chr12	21131336	21141485	-	coding	AC022335.1,SLCO1B1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000257062,ENSG00000134538	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.1b	L1	L1	L1FLnI	chr12	21208562	21218587	-	coding	SLCO1B1	protein_coding	ANTISENSE	ENSG00000134538	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.1c	L1	L1	L1FLnI	chr12	21356937	21367057	+	coding	SLCO1A2,IAPP	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000084453,ENSG00000121351	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.1d	L1	L1	L1FLnI	chr12	21391511	21401539	+	coding	SLCO1A2	protein_coding	ANTISENSE	ENSG00000084453	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.1e	L1	L1	L1FLnI	chr12	21415717	21425734	+	coding	SLCO1A2	protein_coding	ANTISENSE	ENSG00000084453	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chr12:21416572-21416962	chr12:21419198-21419208
L1FLnI_12p12.1f	L1	L1	L1FLnI	chr12	21585947	21595575	+	noncoding	GYS2,AC010197.2	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000111713,ENSG00000285854	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.1g	L1	L1	L1FLnI	chr12	21622302	21631211	-	noncoding	AC010197.2	protein_coding	SENSE	ENSG00000285854	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.1h	L1	L1	L1FLnI	chr12	21789070	21799516	-	coding	ABCC9	protein_coding	SENSE	ENSG00000069431	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.1i	L1	L1	L1FLnI	chr12	21895837	21905923	+	noncoding	ABCC9	protein_coding	ANTISENSE	ENSG00000069431	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.1j	L1	L1	L1FLnI	chr12	21958709	21968854	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ABCC9	ENSG00000069431	16180	AC092862.1	ENSG00000255627	39494	None	None
L1FLnI_12p12.1k	L1	L1	L1FLnI	chr12	22095061	22103760	-	noncoding	ST8SIA1	protein_coding	SENSE	ENSG00000111728	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.1l	L1	L1	L1FLnI	chr12	22133032	22143047	+	coding	ST8SIA1,SULT6B2P	protein_coding,unitary_pseudogene	ANTISENSE,ANTISENSE	ENSG00000111728,ENSG00000283582	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.1m	L1	L1	L1FLnI	chr12	22133032	22143072	+	coding	ST8SIA1,SULT6B2P	protein_coding,unitary_pseudogene	ANTISENSE,ANTISENSE	ENSG00000111728,ENSG00000283582	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.1n	L1	L1	L1FLnI	chr12	22142689	22153213	+	noncoding	ST8SIA1	protein_coding	ANTISENSE	ENSG00000111728	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:22150360-22150392
L1FLnI_12p12.1o	L1	L1	L1FLnI	chr12	22338309	22347399	+	coding	ST8SIA1	protein_coding	ANTISENSE	ENSG00000111728	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.1p	L1	L1	L1FLnI	chr12	22362119	22372574	+	noncoding	ST8SIA1	protein_coding	ANTISENSE	ENSG00000111728	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.1q	L1	L1	L1FLnI	chr12	22396603	22406677	+	noncoding	ST8SIA1,AC087318.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000111728,ENSG00000256714	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr12:22406289-22406562	None
L1FLnI_12p12.1r	L1	L1	L1FLnI	chr12	22433084	22443171	+	noncoding	ST8SIA1,AC053513.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000111728,ENSG00000250166	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.1s	L1	L1	L1FLnI	chr12	22433084	22443599	+	noncoding	ST8SIA1,AC053513.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000111728,ENSG00000250166	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.1t	L1	L1	L1FLnI	chr12	23070138	23080152	-	coding	AC084816.1	lncRNA	ANTISENSE	ENSG00000256995	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.1u	L1	L1	L1FLnI	chr12	23142338	23152503	+	coding	AC084816.1	lncRNA	SENSE	ENSG00000256995	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.1v	L1	L1	L1FLnI	chr12	23460444	23470856	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087235.1	ENSG00000115934	208945	SOX5	ENSG00000134532	58648	None	None
L1FLnI_12p12.1w	L1	L1	L1FLnI	chr12	23461715	23470856	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087235.1	ENSG00000115934	210216	SOX5	ENSG00000134532	58648	None	None
L1FLnI_12p12.1x	L1	L1	L1FLnI	chr12	23515155	23524682	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SOX5	ENSG00000134532	4822	AC087235.1	ENSG00000115934	263656	None	None
L1FLnI_12p12.1y	L1	L1	L1FLnI	chr12	23818930	23829030	-	noncoding	SOX5	protein_coding	SENSE	ENSG00000134532	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.1z	L1	L1	L1FLnI	chr12	25533216	25543234	+	coding	LMNTD1	protein_coding	ANTISENSE	ENSG00000152936	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.1aa	L1	L1	L1FLnI	chr12	25603852	25613976	-	noncoding	LMNTD1	protein_coding	SENSE	ENSG00000152936	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p12.1ba	L1	L1	L1FLnI	chr12	25626797	25635458	+	noncoding	LMNTD1	protein_coding	ANTISENSE	ENSG00000152936	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:25630752-25630762,chr12:25630768-25630774,chr12:25630943-25630951
L1FLnI_12p12.1ca	L1	L1	L1FLnI	chr12	25659944	25669332	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP262	ENSG00000222950	109955	LMNTD1	ENSG00000152936	11365	None	None
L1FLnI_12p11.23a	L1	L1	L1FLnI	chr12	26309854	26320262	-	coding	AC022509.2,AC022509.1,AC055720.3,AC024145.1	lncRNA,lncRNA,lncRNA,lncRNA	SENSE,SENSE,ANTISENSE,ANTISENSE	ENSG00000256234,ENSG00000255750,ENSG00000288532,ENSG00000255968	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p11.23b	L1	L1	L1FLnI	chr12	26666059	26676209	+	coding	ITPR2	protein_coding	ANTISENSE	ENSG00000123104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p11.23c	L1	L1	L1FLnI	chr12	27113734	27123939	-	coding	AC092747.1,AC092747.2	lncRNA,unprocessed_pseudogene	SENSE,ANTISENSE	ENSG00000256226,ENSG00000256625	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p11.23d	L1	L1	L1FLnI	chr12	27165329	27175839	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STK38L	ENSG00000211455	68129	AC092747.1	ENSG00000256226	3936	None	None
L1FLnI_12p11.23e	L1	L1	L1FLnI	chr12	27401119	27411253	+	coding	ARNTL2,ARNTL2-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000029153,ENSG00000245311	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p11.22a	L1	L1	L1FLnI	chr12	28002496	28011579	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC91	ENSG00000123106	121670	PTHLH	ENSG00000087494	29763	None	None
L1FLnI_12p11.22b	L1	L1	L1FLnI	chr12	28460307	28471445	+	noncoding	CCDC91	protein_coding	SENSE	ENSG00000123106	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p11.22c	L1	L1	L1FLnI	chr12	28523615	28532156	-	noncoding	CCDC91	protein_coding	ANTISENSE	ENSG00000123106	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p11.22d	L1	L1	L1FLnI	chr12	28664632	28673444	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC91	ENSG00000123106	83121	AC022081.1	ENSG00000256513	148531	chr12:28665508-28665839	chr12:28667033-28667036
L1FLnI_12p11.22e	L1	L1	L1FLnI	chr12	28672514	28681075	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC022081.1	ENSG00000256513	140900	CCDC91	ENSG00000123106	91003	None	None
L1FLnI_12p11.22f	L1	L1	L1FLnI	chr12	28757620	28766554	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC91	ENSG00000123106	176109	AC022081.1	ENSG00000256513	55421	None	None
L1FLnI_12p11.22g	L1	L1	L1FLnI	chr12	29108219	29116870	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012150.1	ENSG00000257258	26099	AC024255.1	ENSG00000278687	129534	None	None
L1FLnI_12p11.22h	L1	L1	L1FLnI	chr12	29319563	29329407	+	coding	FAR2	protein_coding	SENSE	ENSG00000064763	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr12:29320542-29320559	None
L1FLnI_12p11.22i	L1	L1	L1FLnI	chr12	29405812	29415972	-	coding	OVCH1-AS1,OVCH1	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000257599,ENSG00000187950	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p11.22j	L1	L1	L1FLnI	chr12	29806228	29816250	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMTC1	ENSG00000133687	21469	AC023511.3	ENSG00000286566	270092	None	None
L1FLnI_12p11.22k	L1	L1	L1FLnI	chr12	29844962	29855118	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMTC1	ENSG00000133687	60203	AC023511.3	ENSG00000286566	231224	None	None
L1FLnI_12p11.22l	L1	L1	L1FLnI	chr12	29906427	29916552	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMTC1	ENSG00000133687	121668	AC023511.3	ENSG00000286566	169790	None	None
L1FLnI_12p11.22m	L1	L1	L1FLnI	chr12	30306432	30315063	+	noncoding	AC078776.2,RNA5SP356	unitary_pseudogene,rRNA_pseudogene	SENSE,ANTISENSE	ENSG00000284682,ENSG00000251781	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p11.21a	L1	L1	L1FLnI	chr12	30584855	30595011	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC026371.1	ENSG00000258202	92553	IPO8	ENSG00000133704	33977	None	None
L1FLnI_12p11.21b	L1	L1	L1FLnI	chr12	30889145	30898670	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TSPAN11	ENSG00000110900	27758	AC010198.2	ENSG00000285517	9877	None	None
L1FLnI_12p11.21c	L1	L1	L1FLnI	chr12	31159576	31169594	+	coding	AC024940.2	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000177359	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p11.21d	L1	L1	L1FLnI	chr12	31549568	31559705	-	coding	DENND5B	protein_coding	SENSE	ENSG00000170456	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p11.21e	L1	L1	L1FLnI	chr12	32423571	32433245	-	coding	FGD4	protein_coding	ANTISENSE	ENSG00000139132	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr12:32423886-32423890
L1FLnI_12p11.21f	L1	L1	L1FLnI	chr12	32952654	32962830	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PKP2	ENSG00000057294	55814	AC087311.1	ENSG00000257316	23008	None	None
L1FLnI_12p11.21g	L1	L1	L1FLnI	chr12	33069243	33078663	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SYT10	ENSG00000110975	295575	AC087311.2	ENSG00000257435	75489	None	None
L1FLnI_12p11.21h	L1	L1	L1FLnI	chr12	33101783	33111956	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SYT10	ENSG00000110975	262282	AC087311.2	ENSG00000257435	108029	None	None
L1FLnI_12p11.21i	L1	L1	L1FLnI	chr12	33141269	33151412	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SYT10	ENSG00000110975	222826	AC087311.2	ENSG00000257435	147515	None	None
L1FLnI_12p11.21j	L1	L1	L1FLnI	chr12	33193666	33202584	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SYT10	ENSG00000110975	171654	AC087311.2	ENSG00000257435	199912	None	None
L1FLnI_12p11.1a	L1	L1	L1FLnI	chr12	33216621	33227080	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SYT10	ENSG00000110975	147158	AC087311.2	ENSG00000257435	222867	None	None
L1FLnI_12p11.1b	L1	L1	L1FLnI	chr12	33224066	33234214	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC087311.2	ENSG00000257435	230312	SYT10	ENSG00000110975	140024	None	None
L1FLnI_12p11.1c	L1	L1	L1FLnI	chr12	33328435	33338377	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC087311.2	ENSG00000257435	334681	SYT10	ENSG00000110975	35861	None	None
L1FLnI_12p11.1d	L1	L1	L1FLnI	chr12	33328435	33338384	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC087311.2	ENSG00000257435	334681	SYT10	ENSG00000110975	35854	None	None
L1FLnI_12p11.1e	L1	L1	L1FLnI	chr12	33458954	33469381	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC016956.1	ENSG00000256070	3502	RNU6-400P	ENSG00000212475	106714	None	None
L1FLnI_12p11.1f	L1	L1	L1FLnI	chr12	33517271	33527364	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC016956.1	ENSG00000256070	61819	RNU6-400P	ENSG00000212475	48731	None	None
L1FLnI_12p11.1g	L1	L1	L1FLnI	chr12	33734424	33743988	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC024153.1	ENSG00000270807	16207	RNU6-472P	ENSG00000207026	179386	None	None
L1FLnI_12p11.1h	L1	L1	L1FLnI	chr12	33769368	33779514	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC024153.1	ENSG00000270807	51151	RNU6-472P	ENSG00000207026	143860	None	None
L1FLnI_12p11.1i	L1	L1	L1FLnI	chr12	33796351	33806785	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-472P	ENSG00000207026	116589	AC024153.1	ENSG00000270807	78134	None	None
L1FLnI_12p11.1j	L1	L1	L1FLnI	chr12	33844634	33854651	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC024153.1	ENSG00000270807	126417	RNU6-472P	ENSG00000207026	68723	None	None
L1FLnI_12p11.1k	L1	L1	L1FLnI	chr12	33914460	33924559	-	noncoding	RNU6-472P	snRNA	SENSE	ENSG00000207026	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p11.1l	L1	L1	L1FLnI	chr12	33926956	33937066	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-472P	ENSG00000207026	3476	AC046130.1	ENSG00000201624	45399	None	None
L1FLnI_12p11.1m	L1	L1	L1FLnI	chr12	34066324	34076346	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC140847.1	ENSG00000255628	73493	AC046130.3	ENSG00000256538	7579	None	None
L1FLnI_12p11.1n	L1	L1	L1FLnI	chr12	34079742	34089838	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC046130.3	ENSG00000256538	20997	AC140847.1	ENSG00000255628	60001	None	None
L1FLnI_12p11.1o	L1	L1	L1FLnI	chr12	34181652	34190554	-	noncoding	AC140847.2	lncRNA	SENSE	ENSG00000255652	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12p11.1p	L1	L1	L1FLnI	chr12	34427492	34436872	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AK6P1	ENSG00000256614	177534	ZNF970P	ENSG00000258368	3138715	None	None
L1FLnI_12p11.1q	L1	L1	L1FLnI	chr12	34463551	34473694	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF970P	ENSG00000258368	3101893	AK6P1	ENSG00000256614	213593	None	None
L1FLnI_12p11.1r	L1	L1	L1FLnI	chr12	34472805	34482955	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AK6P1	ENSG00000256614	222847	ZNF970P	ENSG00000258368	3092632	None	None
L1FLnI_12p11.1s	L1	L1	L1FLnI	chr12	34608008	34618154	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF970P	ENSG00000258368	2957433	AK6P1	ENSG00000256614	358050	None	None
L1FLnI_12p11.1t	L1	L1	L1FLnI	chr12	34636046	34646173	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AK6P1	ENSG00000256614	386088	ZNF970P	ENSG00000258368	2929414	None	None
L1FLnI_12p11.1u	L1	L1	L1FLnI	chr12	34666585	34676603	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF970P	ENSG00000258368	2898984	AK6P1	ENSG00000256614	416627	None	None
L1FLnI_12q11a	L1	L1	L1FLnI	chr12	37317378	37327407	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF970P	ENSG00000258368	248180	AK6P1	ENSG00000256614	3067420	None	None
L1FLnI_12q11b	L1	L1	L1FLnI	chr12	37660276	37670248	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AK6P2	ENSG00000257173	408281	ZNF970P	ENSG00000258368	83892	None	None
L1FLnI_12q11c	L1	L1	L1FLnI	chr12	37678110	37688260	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF970P	ENSG00000258368	101726	AK6P2	ENSG00000257173	390269	None	None
L1FLnI_12q11d	L1	L1	L1FLnI	chr12	37758201	37768110	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF970P	ENSG00000258368	181817	AK6P2	ENSG00000257173	310419	None	None
L1FLnI_12q11e	L1	L1	L1FLnI	chr12	37783412	37793554	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF970P	ENSG00000258368	207028	AK6P2	ENSG00000257173	284975	None	None
L1FLnI_12q12a	L1	L1	L1FLnI	chr12	37888906	37899042	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF970P	ENSG00000258368	312522	AK6P2	ENSG00000257173	179487	None	None
L1FLnI_12q12b	L1	L1	L1FLnI	chr12	38027935	38038068	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF970P	ENSG00000258368	451551	AK6P2	ENSG00000257173	40461	None	None
L1FLnI_12q12c	L1	L1	L1FLnI	chr12	38087837	38097973	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CLUHP8	ENSG00000258278	445	AC079460.1	ENSG00000274293	52077	None	None
L1FLnI_12q12d	L1	L1	L1FLnI	chr12	38203829	38213835	+	coding	AC117372.2,NF1P12	unprocessed_pseudogene,unprocessed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000257292,ENSG00000258360	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12e	L1	L1	L1FLnI	chr12	38375616	38385115	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087897.1	ENSG00000257645	147780	ALG10B	ENSG00000175548	45895	None	None
L1FLnI_12q12f	L1	L1	L1FLnI	chr12	38796148	38806173	+	coding	CPNE8	protein_coding	ANTISENSE	ENSG00000139117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12g	L1	L1	L1FLnI	chr12	38937326	38948668	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CPNE8-AS1	ENSG00000257718	27734	AC018448.2	ENSG00000257586	46135	None	None
L1FLnI_12q12h	L1	L1	L1FLnI	chr12	38962968	38973103	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC018448.2	ENSG00000257586	21700	CPNE8-AS1	ENSG00000257718	53376	None	None
L1FLnI_12q12i	L1	L1	L1FLnI	chr12	38984178	38993077	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CPNE8-AS1	ENSG00000257718	74586	AC018448.2	ENSG00000257586	1726	None	None
L1FLnI_12q12j	L1	L1	L1FLnI	chr12	39191776	39201058	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	KIF21A	ENSG00000139116	92170	AC084373.1	ENSG00000270718	20896	None	None
L1FLnI_12q12k	L1	L1	L1FLnI	chr12	39204252	39214392	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084373.1	ENSG00000270718	33372	KIF21A	ENSG00000139116	78836	None	None
L1FLnI_12q12l	L1	L1	L1FLnI	chr12	39469156	39479305	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC121334.2	ENSG00000270273	60276	AC121334.1	ENSG00000255991	1811	None	None
L1FLnI_12q12m	L1	L1	L1FLnI	chr12	39563127	39573276	-	noncoding	ABCD2	protein_coding	SENSE	ENSG00000173208	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12n	L1	L1	L1FLnI	chr12	39663580	39673684	-	noncoding	C12orf40	protein_coding	ANTISENSE	ENSG00000180116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12o	L1	L1	L1FLnI	chr12	39670875	39681489	+	noncoding	C12orf40	protein_coding	SENSE	ENSG00000180116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12p	L1	L1	L1FLnI	chr12	39695636	39705585	+	noncoding	C12orf40	protein_coding	SENSE	ENSG00000180116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12q	L1	L1	L1FLnI	chr12	39725668	39735284	-	noncoding	C12orf40	protein_coding	ANTISENSE	ENSG00000180116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12r	L1	L1	L1FLnI	chr12	39742460	39752560	+	coding	C12orf40	protein_coding	SENSE	ENSG00000180116	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12s	L1	L1	L1FLnI	chr12	39940588	39950585	-	coding	SLC2A13	protein_coding	SENSE	ENSG00000151229	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12t	L1	L1	L1FLnI	chr12	39940646	39950585	-	coding	SLC2A13	protein_coding	SENSE	ENSG00000151229	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12u	L1	L1	L1FLnI	chr12	39974818	39984839	+	coding	SLC2A13	protein_coding	ANTISENSE	ENSG00000151229	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12v	L1	L1	L1FLnI	chr12	40814544	40823562	-	noncoding	CNTN1	protein_coding	ANTISENSE	ENSG00000018236	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12w	L1	L1	L1FLnI	chr12	40833658	40842412	+	coding	CNTN1	protein_coding	SENSE	ENSG00000018236	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr12:40839423-40839445,chr12:40839723-40839734,chr12:40840526-40840536
L1FLnI_12q12x	L1	L1	L1FLnI	chr12	41080960	41090971	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PDZRN4	ENSG00000165966	97349	CNTN1	ENSG00000018236	8545	None	None
L1FLnI_12q12y	L1	L1	L1FLnI	chr12	41080970	41090971	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PDZRN4	ENSG00000165966	97349	CNTN1	ENSG00000018236	8555	None	None
L1FLnI_12q12z	L1	L1	L1FLnI	chr12	41636917	41646940	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP360	ENSG00000252364	11736	PDZRN4	ENSG00000165966	62172	None	None
L1FLnI_12q12aa	L1	L1	L1FLnI	chr12	41665806	41675830	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTND2P17	ENSG00000258239	22665	RNA5SP360	ENSG00000252364	7013	None	None
L1FLnI_12q12ba	L1	L1	L1FLnI	chr12	41668954	41678969	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP360	ENSG00000252364	10161	MTND2P17	ENSG00000258239	19526	None	None
L1FLnI_12q12ca	L1	L1	L1FLnI	chr12	41668954	41678967	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP360	ENSG00000252364	10161	MTND2P17	ENSG00000258239	19528	None	None
L1FLnI_12q12da	L1	L1	L1FLnI	chr12	41866731	41876796	+	coding	AC090630.1	lncRNA	ANTISENSE	ENSG00000257239	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12ea	L1	L1	L1FLnI	chr12	41972669	41982837	-	coding	AC006197.2	lncRNA	SENSE	ENSG00000286591	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12fa	L1	L1	L1FLnI	chr12	42042975	42053136	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC023513.1	ENSG00000271379	16799	AC006197.2	ENSG00000286591	18646	None	None
L1FLnI_12q12ga	L1	L1	L1FLnI	chr12	42042987	42053136	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC023513.1	ENSG00000271379	16799	AC006197.2	ENSG00000286591	18658	None	None
L1FLnI_12q12ha	L1	L1	L1FLnI	chr12	42059482	42069620	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC006197.2	ENSG00000286591	35153	AC023513.1	ENSG00000271379	315	None	None
L1FLnI_12q12ia	L1	L1	L1FLnI	chr12	42107647	42117788	+	coding	GXYLT1	protein_coding	ANTISENSE	ENSG00000151233	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12ja	L1	L1	L1FLnI	chr12	42248412	42258074	-	coding	PPHLN1	protein_coding	ANTISENSE	ENSG00000134283	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12ka	L1	L1	L1FLnI	chr12	42653114	42663018	-	coding	LINC02451	lncRNA	ANTISENSE	ENSG00000257164	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12la	L1	L1	L1FLnI	chr12	42704404	42714907	+	noncoding	LINC02450	lncRNA	SENSE	ENSG00000257114	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12ma	L1	L1	L1FLnI	chr12	42719324	42729250	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC068802.1	ENSG00000271272	200598	LINC02450	ENSG00000257114	2204	None	None
L1FLnI_12q12na	L1	L1	L1FLnI	chr12	42720035	42729250	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC068802.1	ENSG00000271272	200598	LINC02450	ENSG00000257114	2915	None	None
L1FLnI_12q12oa	L1	L1	L1FLnI	chr12	42938058	42947642	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012038.2	ENSG00000257849	18480	AC068802.1	ENSG00000271272	7479	None	None
L1FLnI_12q12pa	L1	L1	L1FLnI	chr12	43224228	43234250	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02461	ENSG00000258331	61118	ADAMTS20	ENSG00000173157	119616	None	None
L1FLnI_12q12qa	L1	L1	L1FLnI	chr12	43467475	43477508	+	coding	ADAMTS20	protein_coding	ANTISENSE	ENSG00000173157	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12ra	L1	L1	L1FLnI	chr12	43902983	43913005	+	coding	TMEM117	protein_coding	SENSE	ENSG00000139173	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12sa	L1	L1	L1FLnI	chr12	43947346	43957815	+	noncoding	TMEM117	protein_coding	SENSE	ENSG00000139173	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12ta	L1	L1	L1FLnI	chr12	43948607	43957815	+	noncoding	TMEM117	protein_coding	SENSE	ENSG00000139173	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12ua	L1	L1	L1FLnI	chr12	44107692	44117734	-	coding	TMEM117	protein_coding	ANTISENSE	ENSG00000139173	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12va	L1	L1	L1FLnI	chr12	44107709	44117734	-	coding	TMEM117	protein_coding	ANTISENSE	ENSG00000139173	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12wa	L1	L1	L1FLnI	chr12	44680919	44690932	-	coding	NELL2	protein_coding	SENSE	ENSG00000184613	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12xa	L1	L1	L1FLnI	chr12	44737819	44747954	+	coding	NELL2	protein_coding	ANTISENSE	ENSG00000184613	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12ya	L1	L1	L1FLnI	chr12	44737819	44747944	+	coding	NELL2	protein_coding	ANTISENSE	ENSG00000184613	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12za	L1	L1	L1FLnI	chr12	44928207	44938351	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NELL2	ENSG00000184613	6359	DBX2	ENSG00000185610	76321	None	None
L1FLnI_12q12ab	L1	L1	L1FLnI	chr12	44947460	44957488	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NELL2	ENSG00000184613	25612	DBX2	ENSG00000185610	57184	None	None
L1FLnI_12q12bb	L1	L1	L1FLnI	chr12	45128760	45137851	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP361	ENSG00000199556	10872	AC009248.3	ENSG00000287386	26335	None	None
L1FLnI_12q12cb	L1	L1	L1FLnI	chr12	45367348	45377365	+	coding	ANO6	protein_coding	SENSE	ENSG00000177119	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q12db	L1	L1	L1FLnI	chr12	45388385	45398488	+	coding	ANO6	protein_coding	SENSE	ENSG00000177119	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q13.11a	L1	L1	L1FLnI	chr12	46189450	46199586	-	noncoding	SLC38A1	protein_coding	SENSE	ENSG00000111371	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q13.11b	L1	L1	L1FLnI	chr12	46280018	46290153	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC38A1	ENSG00000111371	10001	SLC38A2	ENSG00000134294	68035	None	None
L1FLnI_12q13.11c	L1	L1	L1FLnI	chr12	46306546	46316662	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC38A2	ENSG00000134294	41526	SLC38A1	ENSG00000111371	36529	None	None
L1FLnI_12q13.11d	L1	L1	L1FLnI	chr12	46420446	46430578	-	coding	AC008014.1	lncRNA	ANTISENSE	ENSG00000257261	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr12:46430380-46430705	None
L1FLnI_12q13.11e	L1	L1	L1FLnI	chr12	46509654	46520861	-	noncoding	AC008014.1	lncRNA	ANTISENSE	ENSG00000257261	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr12:46511518-46511778,chr12:46518185-46518363	chr12:46516620-46516623
L1FLnI_12q13.11f	L1	L1	L1FLnI	chr12	46539432	46549554	-	coding	AC008014.1,AC008035.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000257261,ENSG00000272369	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr12:46548920-46549235	None
L1FLnI_12q13.11g	L1	L1	L1FLnI	chr12	46585968	46595600	-	coding	AC008014.1,AC008035.1,OR7A19P	lncRNA,lncRNA,unprocessed_pseudogene	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000257261,ENSG00000272369,ENSG00000272963	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q13.11h	L1	L1	L1FLnI	chr12	46585968	46595210	-	coding	AC008014.1,AC008035.1,OR7A19P	lncRNA,lncRNA,unprocessed_pseudogene	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000257261,ENSG00000272369,ENSG00000272963	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q13.11i	L1	L1	L1FLnI	chr12	46613999	46624143	+	coding	AC008014.1,AC008035.1	lncRNA,lncRNA	SENSE,SENSE	ENSG00000257261,ENSG00000272369	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q13.11j	L1	L1	L1FLnI	chr12	46633409	46643875	+	coding	AC008014.1,AC008035.1	lncRNA,lncRNA	SENSE,SENSE	ENSG00000257261,ENSG00000272369	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr12:46639510-46639877,chr12:46641537-46641649	chr12:46636270-46636272
L1FLnI_12q13.11k	L1	L1	L1FLnI	chr12	46733490	46743643	+	coding	AC008014.1	lncRNA	SENSE	ENSG00000257261	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q13.11l	L1	L1	L1FLnI	chr12	46845416	46855201	+	coding	AC008014.1	lncRNA	SENSE	ENSG00000257261	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q13.11m	L1	L1	L1FLnI	chr12	46904027	46915617	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008014.1	ENSG00000257261	27243	AC079906.1	ENSG00000274723	54887	None	None
L1FLnI_12q13.11n	L1	L1	L1FLnI	chr12	46988309	46998456	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC079906.1	ENSG00000274723	16154	AMIGO2	ENSG00000139211	77251	None	None
L1FLnI_12q13.11o	L1	L1	L1FLnI	chr12	47053220	47063360	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC079906.1	ENSG00000274723	81065	AMIGO2	ENSG00000139211	12347	None	None
L1FLnI_12q13.11p	L1	L1	L1FLnI	chr12	47423406	47433428	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02156	ENSG00000257906	3214	ADI1P3	ENSG00000258369	29659	None	None
L1FLnI_12q13.11q	L1	L1	L1FLnI	chr12	47470782	47479730	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADI1P3	ENSG00000258369	7161	AC003686.1	ENSG00000257807	4959	None	None
L1FLnI_12q13.11r	L1	L1	L1FLnI	chr12	47493931	47504206	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC003686.1	ENSG00000257807	8209	AC004486.1	ENSG00000257905	89002	None	None
L1FLnI_12q13.11s	L1	L1	L1FLnI	chr12	47520073	47530531	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004486.1	ENSG00000257905	62677	AC003686.1	ENSG00000257807	34351	None	None
L1FLnI_12q13.11t	L1	L1	L1FLnI	chr12	47527617	47537120	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC004486.1	ENSG00000257905	56088	AC003686.1	ENSG00000257807	41895	None	None
L1FLnI_12q13.11u	L1	L1	L1FLnI	chr12	47527998	47537120	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC004486.1	ENSG00000257905	56088	AC003686.1	ENSG00000257807	42276	None	None
L1FLnI_12q13.11v	L1	L1	L1FLnI	chr12	47620360	47630802	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004486.1	ENSG00000257905	26920	RPAP3	ENSG00000005175	30447	None	None
L1FLnI_12q13.11w	L1	L1	L1FLnI	chr12	47632825	47643350	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004486.1	ENSG00000257905	39385	RPAP3	ENSG00000005175	17899	None	None
L1FLnI_12q13.11x	L1	L1	L1FLnI	chr12	47634609	47643350	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC004486.1	ENSG00000257905	41169	RPAP3	ENSG00000005175	17899	None	None
L1FLnI_12q13.11y	L1	L1	L1FLnI	chr12	47670735	47679908	+	coding	RPAP3	protein_coding	ANTISENSE	ENSG00000005175	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q13.11z	L1	L1	L1FLnI	chr12	48319695	48329675	-	coding	AC024257.5,H1-7	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000275228,ENSG00000187166	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:48329288-48329331
L1FLnI_12q13.11aa	L1	L1	L1FLnI	chr12	48397761	48406664	-	noncoding	AC090115.1	lncRNA	ANTISENSE	ENSG00000257735	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q13.11ba	L1	L1	L1FLnI	chr12	48397761	48406661	-	noncoding	AC090115.1	lncRNA	ANTISENSE	ENSG00000257735	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q13.11ca	L1	L1	L1FLnI	chr12	48402678	48412817	-	noncoding	AC090115.1	lncRNA	ANTISENSE	ENSG00000257735	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q13.11da	L1	L1	L1FLnI	chr12	48402688	48412817	-	noncoding	AC090115.1	lncRNA	ANTISENSE	ENSG00000257735	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q13.11ea	L1	L1	L1FLnI	chr12	48430281	48440407	+	coding	AC090115.1	lncRNA	SENSE	ENSG00000257735	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q13.12	L1	L1	L1FLnI	chr12	50969008	50979154	+	coding	HIGD1C	protein_coding	SENSE	ENSG00000214511	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q13.13	L1	L1	L1FLnI	chr12	51562133	51572157	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SCN8A	ENSG00000196876	18109	SLC4A8	ENSG00000050438	46370	None	None
L1FLnI_12q13.2a	L1	L1	L1FLnI	chr12	54737418	54747993	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VDAC1P5	ENSG00000270858	54753	AC079310.1	ENSG00000257634	49984	None	chr12:54743903-54743910,chr12:54743941-54743946
L1FLnI_12q13.2b	L1	L1	L1FLnI	chr12	54737860	54747993	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VDAC1P5	ENSG00000270858	54753	AC079310.1	ENSG00000257634	50426	None	chr12:54743903-54743910,chr12:54743941-54743946
L1FLnI_12q13.2c	L1	L1	L1FLnI	chr12	54773271	54783382	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079310.1	ENSG00000257634	85837	VDAC1P5	ENSG00000270858	19364	None	None
L1FLI_12q13.2	L1	L1	L1FLI	chr12	54787570	54795619	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC079310.1	ENSG00000257634	100136	VDAC1P5	ENSG00000270858	7127	None	None
L1FLnI_12q13.2d	L1	L1	L1FLnI	chr12	54812074	54822220	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MUCL1	ENSG00000172551	8298	VDAC1P5	ENSG00000270858	8485	None	None
L1FLnI_12q13.2e	L1	L1	L1FLnI	chr12	54882387	54892534	-	coding	MUCL1	protein_coding	ANTISENSE	ENSG00000172551	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q13.2f	L1	L1	L1FLnI	chr12	54896920	54907028	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MUCL1	ENSG00000172551	912	TESPA1	ENSG00000135426	40987	None	None
L1FLnI_12q13.2g	L1	L1	L1FLnI	chr12	55080867	55090907	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR9K1P	ENSG00000196534	22170	NEUROD4	ENSG00000123307	50850	None	None
L1FLnI_12q13.2h	L1	L1	L1FLnI	chr12	55095758	55105783	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR9K1P	ENSG00000196534	7294	NEUROD4	ENSG00000123307	65741	None	None
L1FLnI_12q13.2i	L1	L1	L1FLnI	chr12	55150957	55161096	-	coding	OR9R1P	unprocessed_pseudogene	ANTISENSE	ENSG00000224622	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q13.2j	L1	L1	L1FLnI	chr12	55161087	55171116	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR10U1P	ENSG00000227423	22766	OR9R1P	ENSG00000224622	1364	None	None
L1FLnI_12q13.2k	L1	L1	L1FLnI	chr12	55161103	55171116	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR10U1P	ENSG00000227423	22766	OR9R1P	ENSG00000224622	1380	None	None
L1FLnI_12q13.2l	L1	L1	L1FLnI	chr12	55300469	55309671	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR6C6	ENSG00000188324	3900	OR6C5P	ENSG00000230307	2164	None	None
L1FLnI_12q13.2m	L1	L1	L1FLnI	chr12	55340751	55350774	+	coding	OR6C7P	unprocessed_pseudogene	SENSE	ENSG00000257757	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q13.2n	L1	L1	L1FLnI	chr12	55351444	55361885	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR6C7P	ENSG00000257757	7670	OR6C75	ENSG00000187857	1090	None	None
L1FLnI_12q13.2o	L1	L1	L1FLnI	chr12	55414655	55423170	-	noncoding	PHC1P1	processed_pseudogene	SENSE	ENSG00000179899	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr12:55414130-55414655,chr12:55414676-55415096	chr12:55414839-55414866
L1FLnI_12q13.2p	L1	L1	L1FLnI	chr12	55455813	55465956	+	coding	AC122685.1	lncRNA	ANTISENSE	ENSG00000258763	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr12:55459034-55459035
L1FLnI_12q13.2q	L1	L1	L1FLnI	chr12	55480510	55490532	+	coding	AC122685.1	lncRNA	ANTISENSE	ENSG00000258763	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q13.2r	L1	L1	L1FLnI	chr12	55480510	55490565	+	coding	AC122685.1	lncRNA	ANTISENSE	ENSG00000258763	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q13.2s	L1	L1	L1FLnI	chr12	55504199	55514339	-	coding	AC122685.1	lncRNA	SENSE	ENSG00000258763	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q13.2t	L1	L1	L1FLnI	chr12	55556929	55567002	+	coding	AC122685.1	lncRNA	ANTISENSE	ENSG00000258763	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q13.2u	L1	L1	L1FLnI	chr12	55586439	55596463	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC122685.1	ENSG00000258763	968	OR6U2P	ENSG00000272937	11580	None	None
L1FLnI_12q13.2v	L1	L1	L1FLnI	chr12	55594594	55604709	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC122685.1	ENSG00000258763	9123	OR6U2P	ENSG00000272937	3334	None	None
L1FLnI_12q13.3a	L1	L1	L1FLnI	chr12	56884863	56894557	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC121758.2	ENSG00000258679	10595	SDR9C7	ENSG00000170426	28576	None	None
L1FLnI_12q13.3b	L1	L1	L1FLnI	chr12	56943249	56953372	-	noncoding	RDH16	protein_coding	SENSE	ENSG00000139547	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q13.3c	L1	L1	L1FLnI	chr12	56954754	56963311	+	noncoding	RDH16	protein_coding	ANTISENSE	ENSG00000139547	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:56957199-56957242,chr12:56957318-56957329,chr12:56957505-56957516,chr12:56957587-56957613,chr12:56957625-56957634,chr12:56957641-56957643
L1FLnI_12q13.3d	L1	L1	L1FLnI	chr12	56965722	56974272	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RDH16	ENSG00000139547	6348	AC026120.1	ENSG00000278399	6939	None	None
L1FLI_12q13.3	L1	L1	L1FLI	chr12	57645478	57653513	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	B4GALNT1	ENSG00000135454	12239	RPL13AP23	ENSG00000242990	21152	None	None
L1FLnI_12q14.1a	L1	L1	L1FLnI	chr12	57953948	57964426	+	noncoding	ATP23	protein_coding	SENSE	ENSG00000166896	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q14.1b	L1	L1	L1FLnI	chr12	58016646	58026785	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02403	ENSG00000257541	61107	AC084033.2	ENSG00000257668	31885	None	None
L1FLnI_12q14.1c	L1	L1	L1FLnI	chr12	58053155	58063197	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02403	ENSG00000257541	24695	AC084033.2	ENSG00000257668	68394	None	None
L1FLnI_12q14.1d	L1	L1	L1FLnI	chr12	58053171	58063197	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02403	ENSG00000257541	24695	AC084033.2	ENSG00000257668	68410	None	None
L1FLnI_12q14.1e	L1	L1	L1FLnI	chr12	58108759	58118806	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL21P103	ENSG00000241423	125572	AC090643.2	ENSG00000279411	2824	None	None
L1FLnI_12q14.1f	L1	L1	L1FLnI	chr12	58226440	58236587	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL21P103	ENSG00000241423	7791	AC090643.2	ENSG00000279411	120505	None	None
L1FLnI_12q14.1g	L1	L1	L1FLnI	chr12	58422730	58431650	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025578.1	ENSG00000258133	27592	AC020637.1	ENSG00000258231	112474	chr12:58425574-58425826	None
L1FLnI_12q14.1h	L1	L1	L1FLnI	chr12	58470908	58481054	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC020637.1	ENSG00000258231	63070	AC025578.1	ENSG00000258133	75770	None	None
L1FLnI_12q14.1i	L1	L1	L1FLnI	chr12	58628832	58637337	+	noncoding	AC020637.1,LINC02388	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000258231,ENSG00000257259	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q14.1j	L1	L1	L1FLnI	chr12	58703836	58714006	-	coding	AC020637.1,LINC02388	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000258231,ENSG00000257259	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q14.1k	L1	L1	L1FLnI	chr12	58835940	58845325	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LRIG3	ENSG00000139263	26824	AC020637.1	ENSG00000258231	22880	None	None
L1FLnI_12q14.1l	L1	L1	L1FLnI	chr12	59200070	59208836	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC046129.1	ENSG00000286351	69195	AC108721.2	ENSG00000286279	113929	None	None
L1FLnI_12q14.1m	L1	L1	L1FLnI	chr12	59264126	59274575	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC046129.1	ENSG00000286351	133251	AC108721.2	ENSG00000286279	48190	None	None
L1FLnI_12q14.1n	L1	L1	L1FLnI	chr12	59386210	59396658	+	noncoding	AC108721.2,AC108721.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000286279,ENSG00000258214	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q14.1o	L1	L1	L1FLnI	chr12	59386210	59396668	+	noncoding	AC108721.2,AC108721.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000286279,ENSG00000258214	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q14.1p	L1	L1	L1FLnI	chr12	59441229	59450503	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-871P	ENSG00000251931	170	AC108721.2	ENSG00000286279	4355	None	None
L1FLnI_12q14.1q	L1	L1	L1FLnI	chr12	59747614	59757766	+	coding	SLC16A7	protein_coding	SENSE	ENSG00000118596	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q14.1r	L1	L1	L1FLnI	chr12	59792053	59802606	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC16A7	ENSG00000118596	2198	AC079905.1	ENSG00000237176	9496	None	None
L1FLnI_12q14.1s	L1	L1	L1FLnI	chr12	59792053	59801130	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC16A7	ENSG00000118596	2198	AC079905.1	ENSG00000237176	10972	None	None
L1FLnI_12q14.1t	L1	L1	L1FLnI	chr12	59924145	59934100	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079905.1	ENSG00000237176	111569	AC080011.1	ENSG00000257294	158764	None	None
L1FLnI_12q14.1u	L1	L1	L1FLnI	chr12	59924145	59934071	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079905.1	ENSG00000237176	111569	AC080011.1	ENSG00000257294	158793	None	None
L1FLnI_12q14.1v	L1	L1	L1FLnI	chr12	60230876	60241261	+	coding	AC087883.2	lncRNA	ANTISENSE	ENSG00000287014	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q14.1w	L1	L1	L1FLnI	chr12	60503158	60514317	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090022.2	ENSG00000257865	83865	AC090017.1	ENSG00000257308	716842	None	None
L1FLnI_12q14.1x	L1	L1	L1FLnI	chr12	60741964	60752135	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090022.2	ENSG00000257865	322671	AC090017.1	ENSG00000257308	479024	None	None
L1FLnI_12q14.1y	L1	L1	L1FLnI	chr12	60760974	60770395	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090017.1	ENSG00000257308	460764	AC090022.2	ENSG00000257865	341681	None	None
L1FLnI_12q14.1z	L1	L1	L1FLnI	chr12	60808082	60816610	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090017.1	ENSG00000257308	414549	AC090022.2	ENSG00000257865	388789	chr12:60813297-60813678	None
L1FLnI_12q14.1aa	L1	L1	L1FLnI	chr12	60808095	60816610	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090017.1	ENSG00000257308	414549	AC090022.2	ENSG00000257865	388802	chr12:60813297-60813678	None
L1FLnI_12q14.1ba	L1	L1	L1FLnI	chr12	61203386	61212704	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090017.1	ENSG00000257308	18455	AC090022.2	ENSG00000257865	784093	None	None
L1FLnI_12q14.1ca	L1	L1	L1FLnI	chr12	61290285	61300416	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090017.1	ENSG00000257308	57348	DUX4L52	ENSG00000258336	299651	None	None
L1FLnI_12q14.1da	L1	L1	L1FLnI	chr12	61313248	61323371	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090017.1	ENSG00000257308	80311	DUX4L52	ENSG00000258336	276696	None	None
L1FLnI_12q14.1ea	L1	L1	L1FLnI	chr12	61414480	61424615	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DUX4L52	ENSG00000258336	175452	AC090017.1	ENSG00000257308	181543	None	None
L1FLnI_12q14.1fa	L1	L1	L1FLnI	chr12	61617324	61626125	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	DUX4L52	ENSG00000258336	16481	AC090629.1	ENSG00000286402	42177	None	None
L1FLnI_12q14.1ga	L1	L1	L1FLnI	chr12	61725714	61734940	-	coding	TAFA2	protein_coding	SENSE	ENSG00000198673	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q14.1ha	L1	L1	L1FLnI	chr12	61764824	61775317	+	noncoding	TAFA2	protein_coding	ANTISENSE	ENSG00000198673	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q14.1ia	L1	L1	L1FLnI	chr12	61937942	61947969	+	coding	TAFA2	protein_coding	ANTISENSE	ENSG00000198673	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q14.1ja	L1	L1	L1FLnI	chr12	61937942	61947957	+	coding	TAFA2	protein_coding	ANTISENSE	ENSG00000198673	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q14.1ka	L1	L1	L1FLnI	chr12	62107494	62117947	-	noncoding	TAFA2	protein_coding	SENSE	ENSG00000198673	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr12:62114970-62115086	None
L1FLnI_12q14.1la	L1	L1	L1FLnI	chr12	62286873	62296865	-	noncoding	USP15	protein_coding	ANTISENSE	ENSG00000135655	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chr12:62286987-62287039	chr12:62288585-62288625,chr12:62294170-62294187
L1FLnI_12q14.1ma	L1	L1	L1FLnI	chr12	62336963	62347346	-	noncoding	USP15	protein_coding	ANTISENSE	ENSG00000135655	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q14.2a	L1	L1	L1FLnI	chr12	62816304	62826395	+	noncoding	PPM1H	protein_coding	ANTISENSE	ENSG00000111110	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr12:62817581-62818206	chr12:62817112-62817117
L1FLnI_12q14.2b	L1	L1	L1FLnI	chr12	63192732	63202853	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC135584.1	ENSG00000279444	38726	HNRNPA1P69	ENSG00000257332	68551	None	None
L1FLnI_12q14.2c	L1	L1	L1FLnI	chr12	63192732	63202849	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC135584.1	ENSG00000279444	38726	HNRNPA1P69	ENSG00000257332	68555	None	None
L1FLnI_12q14.2d	L1	L1	L1FLnI	chr12	63236923	63247038	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC135584.1	ENSG00000279444	82917	HNRNPA1P69	ENSG00000257332	24366	None	None
L1FLnI_12q14.2e	L1	L1	L1FLnI	chr12	63326822	63337219	+	noncoding	AC026116.1	lncRNA	ANTISENSE	ENSG00000258117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q14.2f	L1	L1	L1FLnI	chr12	63333392	63343511	+	noncoding	AC026116.1	lncRNA	ANTISENSE	ENSG00000258117	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q14.2g	L1	L1	L1FLnI	chr12	63365903	63374763	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DPY19L2	ENSG00000177990	184150	AC026116.1	ENSG00000258117	5866	None	None
L1FLnI_12q14.2h	L1	L1	L1FLnI	chr12	63487603	63497320	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DPY19L2	ENSG00000177990	61593	AC026116.1	ENSG00000258117	127566	None	None
L1FLnI_12q14.2i	L1	L1	L1FLnI	chr12	63568568	63579111	+	noncoding	DPY19L2	protein_coding	ANTISENSE	ENSG00000177990	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q14.2j	L1	L1	L1FLnI	chr12	63624583	63634719	+	noncoding	DPY19L2,AC084357.2	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000177990,ENSG00000249753	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q14.2k	L1	L1	L1FLnI	chr12	63630830	63640863	+	coding	DPY19L2,AC084357.2	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000177990,ENSG00000249753	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_12q14.2	L1	L1	L1FLI	chr12	64194586	64202633	+	coding	C12orf66	protein_coding	ANTISENSE	ENSG00000174206	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q14.2l	L1	L1	L1FLnI	chr12	64286851	64296877	-	coding	AC012158.1,C12orf56	transcribed_processed_pseudogene,protein_coding	ANTISENSE,SENSE	ENSG00000243024,ENSG00000185306	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q14.3a	L1	L1	L1FLnI	chr12	65029974	65040081	-	noncoding	AC135895.1	lncRNA	ANTISENSE	ENSG00000198671	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q14.3b	L1	L1	L1FLnI	chr12	65397112	65407559	-	noncoding	MSRB3	protein_coding	ANTISENSE	ENSG00000174099	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q14.3c	L1	L1	L1FLnI	chr12	65548922	65558607	-	coding	AC025419.1,AC090023.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000250748,ENSG00000255866	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:65557744-65557747
L1FLnI_12q14.3d	L1	L1	L1FLnI	chr12	66407462	66416595	+	noncoding	GRIP1	protein_coding	ANTISENSE	ENSG00000155974	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr12:66407549-66407561
L1FLnI_12q14.3e	L1	L1	L1FLnI	chr12	66469034	66479534	+	noncoding	GRIP1	protein_coding	ANTISENSE	ENSG00000155974	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q14.3f	L1	L1	L1FLnI	chr12	66518021	66528184	+	coding	GRIP1	protein_coding	ANTISENSE	ENSG00000155974	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q14.3g	L1	L1	L1FLnI	chr12	66549992	66558660	+	noncoding	GRIP1	protein_coding	ANTISENSE	ENSG00000155974	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q14.3h	L1	L1	L1FLnI	chr12	66574769	66584909	+	coding	GRIP1	protein_coding	ANTISENSE	ENSG00000155974	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q14.3i	L1	L1	L1FLnI	chr12	67225595	67235127	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GGTA2P	ENSG00000237766	30715	RAB11AP2	ENSG00000255976	93390	None	None
L1FLnI_12q15a	L1	L1	L1FLnI	chr12	67486405	67496356	+	noncoding	LINC02408	lncRNA	SENSE	ENSG00000203585	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q15b	L1	L1	L1FLnI	chr12	67549217	67559685	-	coding	LINC02408	lncRNA	ANTISENSE	ENSG00000203585	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q15c	L1	L1	L1FLnI	chr12	67843307	67853321	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01479	ENSG00000255772	75914	AC022513.1	ENSG00000279505	89490	None	None
L1FLnI_12q15d	L1	L1	L1FLnI	chr12	67863419	67873839	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01479	ENSG00000255772	55396	AC022513.1	ENSG00000279505	109602	None	None
L1FLnI_12q15e	L1	L1	L1FLnI	chr12	67896710	67906724	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC022513.1	ENSG00000279505	142893	LINC01479	ENSG00000255772	22511	None	None
L1FLnI_12q15f	L1	L1	L1FLnI	chr12	67970528	67980877	-	noncoding	AC005294.1	processed_pseudogene	SENSE	ENSG00000256835	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q15g	L1	L1	L1FLnI	chr12	68058015	68068326	-	noncoding	IFNG-AS1	lncRNA	ANTISENSE	ENSG00000255733	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q15h	L1	L1	L1FLnI	chr12	68987551	68997694	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CPM	ENSG00000135678	15981	AC127894.1	ENSG00000258140	214414	None	None
L1FLnI_12q15i	L1	L1	L1FLnI	chr12	69772912	69782941	-	coding	RAB3IP	protein_coding	ANTISENSE	ENSG00000127328	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q15j	L1	L1	L1FLnI	chr12	69935202	69945197	+	coding	MYRFL,CNOT2-DT	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000166268,ENSG00000257815	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:69936108-69936109
L1ORF2_12q15	L1	L1	L1ORF2	chr12	70012051	70020097	+	coding	CNOT2-DT	lncRNA	ANTISENSE	ENSG00000257815	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q15k	L1	L1	L1FLnI	chr12	70298727	70308816	-	coding	CNOT2	protein_coding	ANTISENSE	ENSG00000111596	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	chr12:70305893-70305897
L1FLnI_12q15l	L1	L1	L1FLnI	chr12	70491624	70501155	-	noncoding	AC025569.1	lncRNA	ANTISENSE	ENSG00000258168	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q15m	L1	L1	L1FLnI	chr12	70761522	70771663	+	coding	PTPRR	protein_coding	ANTISENSE	ENSG00000153233	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q15n	L1	L1	L1FLnI	chr12	71086509	71097462	-	noncoding	AC025575.1,AC025575.2	lncRNA,lncRNA	SENSE,SENSE	ENSG00000257454,ENSG00000258053	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q15o	L1	L1	L1FLnI	chr12	71094875	71104141	+	coding	AC025575.1,AC025575.2	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000257454,ENSG00000258053	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.1a	L1	L1	L1FLnI	chr12	71114574	71124603	+	coding	AC025575.2	lncRNA	ANTISENSE	ENSG00000258053	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.1b	L1	L1	L1FLnI	chr12	71316665	71327342	+	noncoding	TSPAN8	protein_coding	ANTISENSE	ENSG00000127324	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr12:71320491-71320578	None
L1FLnI_12q21.1c	L1	L1	L1FLnI	chr12	72149899	72160042	-	coding	TPH2,TRHDE	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000139287,ENSG00000072657	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.1d	L1	L1	L1FLnI	chr12	72481282	72489845	+	coding	TRHDE	protein_coding	SENSE	ENSG00000072657	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr12:72481318-72481578,chr12:72482560-72482649	chr12:72481575-72481578
L1FLnI_12q21.1e	L1	L1	L1FLnI	chr12	72514142	72524156	-	coding	TRHDE	protein_coding	ANTISENSE	ENSG00000072657	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.1f	L1	L1	L1FLnI	chr12	72634006	72644019	-	coding	TRHDE	protein_coding	ANTISENSE	ENSG00000072657	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.1g	L1	L1	L1FLnI	chr12	72640524	72649146	+	noncoding	TRHDE	protein_coding	SENSE	ENSG00000072657	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.1h	L1	L1	L1FLnI	chr12	72736976	72747184	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC133480.1	ENSG00000258235	8132	AC090503.2	ENSG00000258294	368773	None	None
L1FLnI_12q21.1i	L1	L1	L1FLnI	chr12	72807081	72817198	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090503.2	ENSG00000258294	298759	AC133480.1	ENSG00000258235	78237	None	None
L1FLnI_12q21.1j	L1	L1	L1FLnI	chr12	72834704	72846033	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC133480.1	ENSG00000258235	105860	AC090503.2	ENSG00000258294	269924	None	None
L1FLnI_12q21.1k	L1	L1	L1FLnI	chr12	72850862	72861071	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090503.2	ENSG00000258294	254886	AC133480.1	ENSG00000258235	122018	None	None
L1FLnI_12q21.1l	L1	L1	L1FLnI	chr12	72932135	72940908	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090503.2	ENSG00000258294	175049	AC133480.1	ENSG00000258235	203291	None	None
L1FLnI_12q21.1m	L1	L1	L1FLnI	chr12	73147119	73157145	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02444	ENSG00000258123	2045	AC090503.2	ENSG00000258294	3261	None	None
L1FLnI_12q21.1n	L1	L1	L1FLnI	chr12	73193125	73203287	-	coding	LINC02444	lncRNA	ANTISENSE	ENSG00000258123	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.1o	L1	L1	L1FLnI	chr12	73211487	73220192	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087879.1	ENSG00000243164	428474	LINC02444	ENSG00000258123	3170	None	None
L1FLnI_12q21.1p	L1	L1	L1FLnI	chr12	73283156	73293168	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC087879.1	ENSG00000243164	355498	LINC02444	ENSG00000258123	74839	None	None
L1FLnI_12q21.1q	L1	L1	L1FLnI	chr12	73310751	73320259	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087879.1	ENSG00000243164	328407	LINC02444	ENSG00000258123	102434	None	None
L1FLnI_12q21.1r	L1	L1	L1FLnI	chr12	73311043	73320259	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087879.1	ENSG00000243164	328407	LINC02444	ENSG00000258123	102726	None	None
L1FLnI_12q21.1s	L1	L1	L1FLnI	chr12	73391311	73401330	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02444	ENSG00000258123	182994	AC087879.1	ENSG00000243164	247336	None	None
L1FLnI_12q21.1t	L1	L1	L1FLnI	chr12	73497542	73507708	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087879.1	ENSG00000243164	140958	LINC02444	ENSG00000258123	289225	None	None
L1FLnI_12q21.1u	L1	L1	L1FLnI	chr12	73533693	73543833	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02444	ENSG00000258123	325376	AC087879.1	ENSG00000243164	104833	None	None
L1FLnI_12q21.1v	L1	L1	L1FLnI	chr12	73602205	73612339	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02444	ENSG00000258123	393888	AC087879.1	ENSG00000243164	36327	None	None
L1FLnI_12q21.1w	L1	L1	L1FLnI	chr12	73602205	73612329	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02444	ENSG00000258123	393888	AC087879.1	ENSG00000243164	36337	None	None
L1FLnI_12q21.1x	L1	L1	L1FLnI	chr12	73667604	73677170	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087879.1	ENSG00000243164	18565	RNU6-1012P	ENSG00000252415	2018	None	None
L1FLnI_12q21.1y	L1	L1	L1FLnI	chr12	73680661	73689218	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1012P	ENSG00000252415	1365	LINC02445	ENSG00000257750	69439	None	None
L1FLnI_12q21.1z	L1	L1	L1FLnI	chr12	73974429	73984398	+	coding	AC090015.1	lncRNA	ANTISENSE	ENSG00000251138	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.1aa	L1	L1	L1FLnI	chr12	74063102	74072674	+	noncoding	AC090015.1	lncRNA	ANTISENSE	ENSG00000251138	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.1ba	L1	L1	L1FLnI	chr12	74503023	74513041	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ATXN7L3B	ENSG00000253719	24794	AC090015.1	ENSG00000251138	100423	None	None
L1FLnI_12q21.1ca	L1	L1	L1FLnI	chr12	74672584	74683032	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC123904.1	ENSG00000188646	8443	AC123904.3	ENSG00000257998	45006	None	None
L1FLnI_12q21.1da	L1	L1	L1FLnI	chr12	74871370	74881401	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC123904.3	ENSG00000257998	142519	AC073525.1	ENSG00000257434	139568	None	None
L1FLnI_12q21.1ea	L1	L1	L1FLnI	chr12	74963967	74972503	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC123904.3	ENSG00000257998	235116	AC073525.1	ENSG00000257434	48466	chr12:74971990-74972045	None
L1FLnI_12q21.2a	L1	L1	L1FLnI	chr12	75460627	75471072	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GLIPR1	ENSG00000139278	9681	GLIPR1L2	ENSG00000180481	27939	None	None
L1FLnI_12q21.2b	L1	L1	L1FLnI	chr12	75516932	75527082	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC078923.1	ENSG00000258077	36120	KRR1	ENSG00000111615	5296	None	None
L1FLnI_12q21.2c	L1	L1	L1FLnI	chr12	75607637	75617100	+	noncoding	AC078923.1	lncRNA	ANTISENSE	ENSG00000258077	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.2d	L1	L1	L1FLnI	chr12	75607637	75616850	+	noncoding	AC078923.1	lncRNA	ANTISENSE	ENSG00000258077	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.2e	L1	L1	L1FLnI	chr12	76164892	76173812	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LNCOG	ENSG00000257219	86024	RNU6-1271P	ENSG00000252858	25221	None	None
L1FLnI_12q21.2f	L1	L1	L1FLnI	chr12	76316126	76326197	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP172	ENSG00000223273	78	BBS10	ENSG00000179941	18277	None	None
L1FLnI_12q21.2g	L1	L1	L1FLnI	chr12	76316126	76326226	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP172	ENSG00000223273	78	BBS10	ENSG00000179941	18248	None	None
L1FLnI_12q21.2h	L1	L1	L1FLnI	chr12	76968087	76977443	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025161.1	ENSG00000257199	6636	AC124784.1	ENSG00000257910	87735	None	None
L1FLnI_12q21.2i	L1	L1	L1FLnI	chr12	77089921	77100093	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079030.1	ENSG00000286476	29085	E2F7	ENSG00000165891	24352	None	None
L1FLnI_12q21.2j	L1	L1	L1FLnI	chr12	77089931	77100093	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079030.1	ENSG00000286476	29085	E2F7	ENSG00000165891	24362	None	None
L1ORF2_12q21.2	L1	L1	L1ORF2	chr12	77172369	77180426	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02464	ENSG00000257677	39177	AC079030.1	ENSG00000286476	8731	None	None
L1FLnI_12q21.2k	L1	L1	L1FLnI	chr12	77443848	77455288	+	noncoding	NAV3	protein_coding	SENSE	ENSG00000067798	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.2l	L1	L1	L1FLnI	chr12	77443848	77452920	+	noncoding	NAV3	protein_coding	SENSE	ENSG00000067798	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.2m	L1	L1	L1FLnI	chr12	77455788	77465931	+	coding	NAV3	protein_coding	SENSE	ENSG00000067798	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.2n	L1	L1	L1FLnI	chr12	77455788	77464942	+	coding	NAV3	protein_coding	SENSE	ENSG00000067798	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.2o	L1	L1	L1FLnI	chr12	77519992	77530389	+	noncoding	NAV3	protein_coding	SENSE	ENSG00000067798	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.2p	L1	L1	L1FLnI	chr12	77650466	77660622	+	coding	NAV3	protein_coding	SENSE	ENSG00000067798	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.2q	L1	L1	L1FLnI	chr12	77802597	77813133	-	noncoding	NAV3	protein_coding	ANTISENSE	ENSG00000067798	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.2r	L1	L1	L1FLnI	chr12	78339590	78349789	+	noncoding	LINC02424	lncRNA	ANTISENSE	ENSG00000258220	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.2s	L1	L1	L1FLnI	chr12	78339590	78349266	+	noncoding	LINC02424	lncRNA	ANTISENSE	ENSG00000258220	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.2t	L1	L1	L1FLnI	chr12	78502932	78513087	+	coding	AC079362.1	lncRNA	ANTISENSE	ENSG00000257165	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.2u	L1	L1	L1FLnI	chr12	78515125	78525585	+	coding	AC079362.1	lncRNA	ANTISENSE	ENSG00000257165	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.2v	L1	L1	L1FLnI	chr12	79039123	79049145	-	coding	SYT1,AC090709.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000067715,ENSG00000257191	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:79045246-79045271,chr12:79045625-79045641,chr12:79045664-79045675,chr12:79045681-79045710
L1FLnI_12q21.2w	L1	L1	L1FLnI	chr12	79273195	79282174	+	coding	SYT1	protein_coding	SENSE	ENSG00000067715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr12:79277049-79277484	None
L1FLnI_12q21.2x	L1	L1	L1FLnI	chr12	79857843	79867983	+	noncoding	PPP1R12A	protein_coding	ANTISENSE	ENSG00000058272	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.31a	L1	L1	L1FLnI	chr12	80074171	80084328	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OTOGL	ENSG00000165899	15209	RNU7-106P	ENSG00000238842	5414	None	None
L1FLnI_12q21.31b	L1	L1	L1FLnI	chr12	80109868	80120015	-	noncoding	OTOGL	protein_coding	ANTISENSE	ENSG00000165899	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.31c	L1	L1	L1FLnI	chr12	80122537	80132686	-	noncoding	OTOGL	protein_coding	ANTISENSE	ENSG00000165899	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.31d	L1	L1	L1FLnI	chr12	80143557	80153576	-	coding	OTOGL	protein_coding	ANTISENSE	ENSG00000165899	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.31e	L1	L1	L1FLnI	chr12	80243671	80253684	-	coding	OTOGL	protein_coding	ANTISENSE	ENSG00000165899	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.31f	L1	L1	L1FLnI	chr12	80283365	80293848	-	noncoding	OTOGL	protein_coding	ANTISENSE	ENSG00000165899	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.31g	L1	L1	L1FLnI	chr12	80382967	80392446	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OTOGL	ENSG00000165899	2088	PTPRQ	ENSG00000139304	9732	None	None
L1FLnI_12q21.31h	L1	L1	L1FLnI	chr12	80447877	80457945	-	coding	PTPRQ	protein_coding	ANTISENSE	ENSG00000139304	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.31i	L1	L1	L1FLnI	chr12	80458378	80468517	+	coding	PTPRQ	protein_coding	SENSE	ENSG00000139304	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.31j	L1	L1	L1FLnI	chr12	80474027	80484039	+	coding	PTPRQ	protein_coding	SENSE	ENSG00000139304	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.31k	L1	L1	L1FLnI	chr12	81055844	81065894	-	noncoding	ACSS3	protein_coding	ANTISENSE	ENSG00000111058	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.31l	L1	L1	L1FLnI	chr12	81605348	81615673	-	coding	PPFIA2	protein_coding	SENSE	ENSG00000139220	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.31m	L1	L1	L1FLnI	chr12	81655580	81665695	+	coding	PPFIA2	protein_coding	ANTISENSE	ENSG00000139220	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.31n	L1	L1	L1FLnI	chr12	82092015	82101101	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCDC59	ENSG00000133773	122580	AC011602.1	ENSG00000258193	93053	None	None
L1FLnI_12q21.31o	L1	L1	L1FLnI	chr12	82116984	82127703	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011602.1	ENSG00000258193	118022	CCDC59	ENSG00000133773	95978	None	None
L1FLnI_12q21.31p	L1	L1	L1FLnI	chr12	82544687	82554636	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091214.1	ENSG00000286043	118434	AC089998.1	ENSG00000257431	28870	None	None
L1FLnI_12q21.31q	L1	L1	L1FLnI	chr12	82583287	82591825	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC089998.1	ENSG00000257431	67470	AC091214.1	ENSG00000286043	81245	None	None
L1FLnI_12q21.31r	L1	L1	L1FLnI	chr12	82628630	82639126	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC091214.1	ENSG00000286043	33944	AC089998.1	ENSG00000257431	112813	None	None
L1FLnI_12q21.31s	L1	L1	L1FLnI	chr12	83115548	83126348	-	noncoding	TMTC2	protein_coding	ANTISENSE	ENSG00000179104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.31t	L1	L1	L1FLnI	chr12	83117433	83126348	-	noncoding	TMTC2	protein_coding	ANTISENSE	ENSG00000179104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.31u	L1	L1	L1FLnI	chr12	83226341	83236776	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093025.1	ENSG00000257124	424233	AC090680.1	ENSG00000258338	53601	None	None
L1FLnI_12q21.31v	L1	L1	L1FLnI	chr12	83295957	83306371	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090680.1	ENSG00000258338	123217	AC093025.1	ENSG00000257124	354638	None	None
L1FLnI_12q21.31w	L1	L1	L1FLnI	chr12	83295957	83306361	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090680.1	ENSG00000258338	123217	AC093025.1	ENSG00000257124	354648	None	None
L1FLnI_12q21.31x	L1	L1	L1FLnI	chr12	83548616	83558762	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093025.1	ENSG00000257124	102247	AC090680.1	ENSG00000258338	375876	None	None
L1FLnI_12q21.31y	L1	L1	L1FLnI	chr12	83580768	83590745	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090680.1	ENSG00000258338	408028	AC093025.1	ENSG00000257124	70264	None	None
L1FLnI_12q21.31z	L1	L1	L1FLnI	chr12	83635972	83646473	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC093025.1	ENSG00000257124	14536	AC090680.1	ENSG00000258338	463232	None	None
L1FLnI_12q21.31aa	L1	L1	L1FLnI	chr12	83677746	83688194	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC093025.1	ENSG00000257124	16027	AC090679.3	ENSG00000285191	459110	None	None
L1FLnI_12q21.31ba	L1	L1	L1FLnI	chr12	84005406	84015430	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090679.3	ENSG00000285191	131874	AC093025.1	ENSG00000257124	343687	None	None
L1FLnI_12q21.31ca	L1	L1	L1FLnI	chr12	84038143	84047571	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090679.3	ENSG00000285191	99733	AC093025.1	ENSG00000257124	376424	None	None
L1FLnI_12q21.31da	L1	L1	L1FLnI	chr12	84038143	84047307	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090679.3	ENSG00000285191	99997	AC093025.1	ENSG00000257124	376424	None	None
L1FLnI_12q21.31ea	L1	L1	L1FLnI	chr12	84852190	84861818	-	noncoding	SLC6A15	protein_coding	SENSE	ENSG00000072041	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr12:84854594-84854891	None
L1FLnI_12q21.31fa	L1	L1	L1FLnI	chr12	85189660	85198337	+	coding	LRRIQ1	protein_coding	SENSE	ENSG00000133640	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.31ga	L1	L1	L1FLnI	chr12	85311921	85321959	-	coding	LINC02820	lncRNA	ANTISENSE	ENSG00000258815	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.31ha	L1	L1	L1FLnI	chr12	85647885	85658363	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC137768.1	ENSG00000258206	123529	AC126471.1	ENSG00000257855	79646	None	None
L1FLnI_12q21.31ia	L1	L1	L1FLnI	chr12	85781941	85792041	+	noncoding	AC137768.1	processed_pseudogene	ANTISENSE	ENSG00000258206	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.31ja	L1	L1	L1FLnI	chr12	85860289	85870128	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NTS	ENSG00000133636	4167	RASSF9	ENSG00000198774	23880	None	chr12:85861147-85861187
L1FLnI_12q21.32a	L1	L1	L1FLnI	chr12	86352857	86362994	+	coding	MGAT4C	protein_coding	ANTISENSE	ENSG00000182050	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.32b	L1	L1	L1FLnI	chr12	86519558	86528575	-	noncoding	MGAT4C	protein_coding	SENSE	ENSG00000182050	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.32c	L1	L1	L1FLnI	chr12	86623247	86633413	+	coding	MGAT4C,AC010196.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000182050,ENSG00000258185	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.32d	L1	L1	L1FLnI	chr12	86685679	86694257	-	noncoding	MGAT4C,AC010196.1	protein_coding,lncRNA	SENSE,SENSE	ENSG00000182050,ENSG00000258185	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.32e	L1	L1	L1FLnI	chr12	86760377	86770522	+	coding	MGAT4C,AC010196.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000182050,ENSG00000258185	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.32f	L1	L1	L1FLnI	chr12	86953577	86965411	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079597.1	ENSG00000280049	76505	AC010196.1	ENSG00000258185	114579	None	None
L1FLnI_12q21.32g	L1	L1	L1FLnI	chr12	86966897	86977016	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010196.1	ENSG00000258185	127899	AC079597.1	ENSG00000280049	64900	None	None
L1FLnI_12q21.32h	L1	L1	L1FLnI	chr12	87016549	87027278	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010196.1	ENSG00000258185	177551	AC079597.1	ENSG00000280049	14638	None	None
L1FLnI_12q21.32i	L1	L1	L1FLnI	chr12	87094908	87104939	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC079597.1	ENSG00000280049	52485	RPL23AP68	ENSG00000242850	65046	None	None
L1FLnI_12q21.32j	L1	L1	L1FLnI	chr12	87094908	87104965	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC079597.1	ENSG00000280049	52485	RPL23AP68	ENSG00000242850	65020	None	None
L1FLnI_12q21.32k	L1	L1	L1FLnI	chr12	87145104	87155700	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL23AP68	ENSG00000242850	14285	AC079597.1	ENSG00000280049	102681	None	None
L1FLnI_12q21.32l	L1	L1	L1FLnI	chr12	87146895	87155700	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL23AP68	ENSG00000242850	14285	AC079597.1	ENSG00000280049	104472	None	None
L1FLnI_12q21.32m	L1	L1	L1FLnI	chr12	87167909	87178072	+	coding	RPL23AP68	processed_pseudogene	ANTISENSE	ENSG00000242850	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.32n	L1	L1	L1FLnI	chr12	87198553	87209888	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL23AP68	ENSG00000242850	28124	AC079598.4	ENSG00000258205	536679	None	None
L1FLnI_12q21.32o	L1	L1	L1FLnI	chr12	87198553	87207549	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL23AP68	ENSG00000242850	28124	AC079598.4	ENSG00000258205	539018	None	None
L1FLnI_12q21.32p	L1	L1	L1FLnI	chr12	87357284	87367617	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079598.4	ENSG00000258205	378950	RPL23AP68	ENSG00000242850	186855	None	None
L1FLnI_12q21.32q	L1	L1	L1FLnI	chr12	87357284	87366351	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079598.4	ENSG00000258205	380216	RPL23AP68	ENSG00000242850	186855	None	None
L1FLnI_12q21.32r	L1	L1	L1FLnI	chr12	87390453	87400555	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL23AP68	ENSG00000242850	220024	AC079598.4	ENSG00000258205	346012	None	None
L1FLnI_12q21.32s	L1	L1	L1FLnI	chr12	87414683	87424155	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC079598.4	ENSG00000258205	322412	RPL23AP68	ENSG00000242850	244254	None	None
L1FLnI_12q21.32t	L1	L1	L1FLnI	chr12	87527488	87537586	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL23AP68	ENSG00000242850	357059	AC079598.4	ENSG00000258205	208981	None	None
L1FLnI_12q21.32u	L1	L1	L1FLnI	chr12	87553539	87562879	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL23AP68	ENSG00000242850	383110	AC079598.4	ENSG00000258205	183688	None	None
L1FLnI_12q21.32v	L1	L1	L1FLnI	chr12	87969262	87978678	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	C12orf50	ENSG00000165805	1357	RPS4XP15	ENSG00000240721	18443	None	None
L1FLnI_12q21.32w	L1	L1	L1FLnI	chr12	87969265	87978678	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	C12orf50	ENSG00000165805	1357	RPS4XP15	ENSG00000240721	18446	None	None
L1FLnI_12q21.32x	L1	L1	L1FLnI	chr12	88389461	88399316	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMTC3	ENSG00000139324	189574	AC129416.1	ENSG00000199245	31126	chr12:88391691-88391876	None
L1FLnI_12q21.32y	L1	L1	L1FLnI	chr12	88390525	88399276	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMTC3	ENSG00000139324	190638	AC129416.1	ENSG00000199245	31166	chr12:88391691-88391876	None
L1FLnI_12q21.32z	L1	L1	L1FLnI	chr12	88433178	88443632	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC129416.1	ENSG00000199245	2628	KITLG	ENSG00000049130	49161	chr12:88434468-88434647	None
L1FLnI_12q21.32aa	L1	L1	L1FLnI	chr12	88460592	88470875	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KITLG	ENSG00000049130	21918	AC129416.1	ENSG00000199245	30042	None	None
L1FLnI_12q21.32ba	L1	L1	L1FLnI	chr12	88476616	88487142	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC129416.1	ENSG00000199245	46066	KITLG	ENSG00000049130	5651	None	None
L1FLnI_12q21.33a	L1	L1	L1FLnI	chr12	88663654	88674104	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC024941.1	ENSG00000278011	61459	LINC02458	ENSG00000246363	336577	None	None
L1FLnI_12q21.33b	L1	L1	L1FLnI	chr12	88708359	88718385	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02458	ENSG00000246363	292296	AC024941.1	ENSG00000278011	106164	None	None
L1FLnI_12q21.33c	L1	L1	L1FLnI	chr12	88843493	88853508	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC024941.1	ENSG00000278011	241298	LINC02458	ENSG00000246363	157173	None	chr12:88847374-88847391
L1FLnI_12q21.33d	L1	L1	L1FLnI	chr12	89437155	89447209	+	coding	POC1B	protein_coding	ANTISENSE	ENSG00000139323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.33e	L1	L1	L1FLnI	chr12	89734969	89743837	+	noncoding	AC009522.1	lncRNA	SENSE	ENSG00000258216	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.33f	L1	L1	L1FLnI	chr12	89806081	89816101	-	coding	AC009522.1	lncRNA	ANTISENSE	ENSG00000258216	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_12q21.33	L1	L1	L1ORF2	chr12	90535603	90543649	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02392	ENSG00000258183	234629	LINC02822	ENSG00000286021	32753	None	None
L1FLnI_12q21.33g	L1	L1	L1FLnI	chr12	90569967	90580235	-	noncoding	LINC02822	lncRNA	ANTISENSE	ENSG00000286021	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.33h	L1	L1	L1FLnI	chr12	90569967	90580124	-	noncoding	LINC02822	lncRNA	ANTISENSE	ENSG00000286021	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.33i	L1	L1	L1FLnI	chr12	90748971	90759260	-	noncoding	LINC02822,AC112481.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000286021,ENSG00000288102	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.33j	L1	L1	L1FLnI	chr12	90930865	90940963	-	noncoding	CCER1,LINC00615	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000197651,ENSG00000196243	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q21.33k	L1	L1	L1FLnI	chr12	91087666	91096197	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LUM	ENSG00000139329	6432	KERA	ENSG00000139330	29683	None	None
L1FLnI_12q21.33l	L1	L1	L1FLnI	chr12	91539733	91551734	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090016.1	ENSG00000286049	112797	AC126175.1	ENSG00000274647	81178	None	None
L1FLnI_12q21.33m	L1	L1	L1FLnI	chr12	91800334	91811133	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025254.1	ENSG00000258125	119461	AC090049.2	ENSG00000258224	59989	None	None
L1FLI_12q22	L1	L1	L1FLI	chr12	92312991	92321037	+	coding	LINC02391	lncRNA	ANTISENSE	ENSG00000277851	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q22a	L1	L1	L1FLnI	chr12	92677708	92687847	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PLEKHG7	ENSG00000187510	14996	AC063949.1	ENSG00000258262	146384	None	None
L1FLnI_12q22b	L1	L1	L1FLnI	chr12	92913103	92922262	+	coding	EEA1	protein_coding	ANTISENSE	ENSG00000102189	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q22c	L1	L1	L1FLnI	chr12	93209942	93219218	-	noncoding	AC138123.1	lncRNA	SENSE	ENSG00000257322	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q22d	L1	L1	L1FLnI	chr12	93870866	93882492	-	noncoding	CRADD	protein_coding	ANTISENSE	ENSG00000169372	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q22e	L1	L1	L1FLnI	chr12	93873425	93882492	-	noncoding	CRADD	protein_coding	ANTISENSE	ENSG00000169372	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q22f	L1	L1	L1FLnI	chr12	94001844	94011964	-	noncoding	RN7SKP263	misc_RNA	SENSE	ENSG00000223126	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q22g	L1	L1	L1FLnI	chr12	94060785	94070900	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP263	ENSG00000223126	51738	AC123567.1	ENSG00000257360	69177	None	None
L1FLnI_12q22h	L1	L1	L1FLnI	chr12	94315950	94327170	-	noncoding	CEP83	protein_coding	SENSE	ENSG00000173588	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q22i	L1	L1	L1FLnI	chr12	94386001	94395661	+	noncoding	CEP83	protein_coding	ANTISENSE	ENSG00000173588	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q22j	L1	L1	L1FLnI	chr12	94819321	94829512	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMCC3	ENSG00000057704	168764	KRT19P2	ENSG00000216306	4635	None	None
L1FLnI_12q22k	L1	L1	L1FLnI	chr12	95771707	95781818	+	coding	NTN4	protein_coding	ANTISENSE	ENSG00000074527	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1a	L1	L1	L1FLnI	chr12	95923047	95933065	-	coding	CCDC38	protein_coding	SENSE	ENSG00000165972	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1b	L1	L1	L1FLnI	chr12	96312444	96322471	+	coding	CDK17	protein_coding	ANTISENSE	ENSG00000059758	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1c	L1	L1	L1FLnI	chr12	96598517	96608611	-	coding	CFAP54	protein_coding	ANTISENSE	ENSG00000188596	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1d	L1	L1	L1FLnI	chr12	96606913	96617019	+	noncoding	CFAP54	protein_coding	SENSE	ENSG00000188596	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1e	L1	L1	L1FLnI	chr12	96723184	96733337	-	coding	CFAP54	protein_coding	ANTISENSE	ENSG00000188596	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1f	L1	L1	L1FLnI	chr12	97101777	97111247	-	coding	AC007656.2,AC007656.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000258131,ENSG00000257470	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1g	L1	L1	L1FLnI	chr12	97199848	97210060	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007656.2	ENSG00000258131	14239	LINC02409	ENSG00000257920	62632	None	chr12:97203289-97203294
L1FLnI_12q23.1h	L1	L1	L1FLnI	chr12	97199848	97209661	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007656.2	ENSG00000258131	14239	LINC02409	ENSG00000257920	63031	None	chr12:97203289-97203294
L1FLnI_12q23.1i	L1	L1	L1FLnI	chr12	97348910	97359058	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RMST	ENSG00000255794	71826	LINC02409	ENSG00000257920	72701	None	None
L1FLnI_12q23.1j	L1	L1	L1FLnI	chr12	97602719	97612864	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC018659.2	ENSG00000257157	67015	RMST	ENSG00000255794	4304	None	None
L1FLnI_12q23.1k	L1	L1	L1FLnI	chr12	97650635	97660667	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC018659.2	ENSG00000257157	19212	RMST	ENSG00000255794	52220	None	None
L1FLnI_12q23.1l	L1	L1	L1FLnI	chr12	97690826	97700938	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007424.1	ENSG00000257501	12474	AC018659.2	ENSG00000257157	10779	None	None
L1FLnI_12q23.1m	L1	L1	L1FLnI	chr12	97720341	97730372	+	coding	AC007424.1,RNU6-36P	transcribed_processed_pseudogene,snRNA	ANTISENSE,SENSE	ENSG00000257501,ENSG00000206899	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1n	L1	L1	L1FLnI	chr12	97891821	97902262	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4495	ENSG00000265861	36794	AC007424.1	ENSG00000257501	129962	None	None
L1FLnI_12q23.1o	L1	L1	L1FLnI	chr12	98198184	98208657	+	noncoding	AC016152.1	lncRNA	ANTISENSE	ENSG00000258312	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1p	L1	L1	L1FLnI	chr12	98198184	98207771	+	noncoding	AC016152.1	lncRNA	ANTISENSE	ENSG00000258312	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1q	L1	L1	L1FLnI	chr12	98307270	98317412	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC016152.1	ENSG00000258312	14825	AC008055.1	ENSG00000257580	329	None	None
L1FLnI_12q23.1r	L1	L1	L1FLnI	chr12	99181945	99192344	+	coding	ANKS1B	protein_coding	ANTISENSE	ENSG00000185046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1s	L1	L1	L1FLnI	chr12	99234441	99244529	+	coding	ANKS1B	protein_coding	ANTISENSE	ENSG00000185046	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1t	L1	L1	L1FLnI	chr12	99282000	99292710	+	noncoding	ANKS1B	protein_coding	ANTISENSE	ENSG00000185046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1u	L1	L1	L1FLnI	chr12	99315179	99325308	-	coding	ANKS1B	protein_coding	SENSE	ENSG00000185046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1v	L1	L1	L1FLnI	chr12	99400854	99410158	+	noncoding	ANKS1B	protein_coding	ANTISENSE	ENSG00000185046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1w	L1	L1	L1FLnI	chr12	99459809	99469950	+	coding	ANKS1B	protein_coding	ANTISENSE	ENSG00000185046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1x	L1	L1	L1FLnI	chr12	99480543	99490747	-	noncoding	ANKS1B	protein_coding	SENSE	ENSG00000185046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1y	L1	L1	L1FLnI	chr12	99480543	99489955	-	noncoding	ANKS1B	protein_coding	SENSE	ENSG00000185046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1z	L1	L1	L1FLnI	chr12	99614866	99625907	+	noncoding	ANKS1B	protein_coding	ANTISENSE	ENSG00000185046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1aa	L1	L1	L1FLnI	chr12	99719220	99729440	+	noncoding	ANKS1B	protein_coding	ANTISENSE	ENSG00000185046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1ba	L1	L1	L1FLnI	chr12	99784046	99795479	+	noncoding	ANKS1B	protein_coding	ANTISENSE	ENSG00000185046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr12:99795355-99795654	None
L1FLnI_12q23.1ca	L1	L1	L1FLnI	chr12	99784046	99794960	+	noncoding	ANKS1B	protein_coding	ANTISENSE	ENSG00000185046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1da	L1	L1	L1FLnI	chr12	99850813	99859487	+	noncoding	ANKS1B	protein_coding	ANTISENSE	ENSG00000185046	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1ea	L1	L1	L1FLnI	chr12	100007261	100017315	+	coding	RPS4XP1	processed_pseudogene	ANTISENSE	ENSG00000214203	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1fa	L1	L1	L1FLnI	chr12	100007261	100017302	+	coding	RPS4XP1	processed_pseudogene	ANTISENSE	ENSG00000214203	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1ga	L1	L1	L1FLnI	chr12	100602008	100612029	-	noncoding	GAS2L3	protein_coding	ANTISENSE	ENSG00000139354	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.1ha	L1	L1	L1FLnI	chr12	100636325	100646467	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ANO4	ENSG00000151572	71059	GAS2L3	ENSG00000139354	8037	None	None
L1FLnI_12q23.1ia	L1	L1	L1FLnI	chr12	101056356	101066828	-	coding	ANO4,AC063947.2	protein_coding,unprocessed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000151572,ENSG00000258033	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:101063779-101063781
L1FLnI_12q23.1ja	L1	L1	L1FLnI	chr12	101142545	101152564	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ANO4	ENSG00000151572	13904	SLC5A8	ENSG00000256870	2929	None	None
L1FLnI_12q23.1ka	L1	L1	L1FLnI	chr12	101171242	101180387	+	noncoding	SLC5A8	protein_coding	ANTISENSE	ENSG00000256870	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.2a	L1	L1	L1FLnI	chr12	102137026	102147113	-	coding	PARPBP	protein_coding	ANTISENSE	ENSG00000185480	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.2b	L1	L1	L1FLnI	chr12	102307283	102317268	-	coding	HELLPAR,LINC02456	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000281344,ENSG00000283052	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:102313282-102313294
L1FLnI_12q23.2c	L1	L1	L1FLnI	chr12	102487995	102497586	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC010202.1	ENSG00000257254	15665	IGF1	ENSG00000017427	6251	None	None
L1FLnI_12q23.2d	L1	L1	L1FLnI	chr12	102826679	102836708	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PAH	ENSG00000171759	181	LINC00485	ENSG00000258169	2280	None	None
L1FLnI_12q23.2e	L1	L1	L1FLnI	chr12	102852832	102862482	+	noncoding	PAH	protein_coding	ANTISENSE	ENSG00000171759	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:102855273-102855284
L1FLnI_12q23.2f	L1	L1	L1FLnI	chr12	103357520	103367952	+	noncoding	C12orf42	protein_coding	ANTISENSE	ENSG00000179088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.2g	L1	L1	L1FLnI	chr12	103422415	103431606	+	noncoding	C12orf42	protein_coding	ANTISENSE	ENSG00000179088	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.2h	L1	L1	L1FLnI	chr12	103484670	103493587	-	noncoding	C12orf42	protein_coding	SENSE	ENSG00000179088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr12:103493525-103493556
L1FLnI_12q23.3a	L1	L1	L1FLnI	chr12	103561592	103571366	+	noncoding	AC084364.4,LINC02401	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000286197,ENSG00000257762	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:103569731-103569739
L1FLnI_12q23.3b	L1	L1	L1FLnI	chr12	103562431	103571366	+	noncoding	AC084364.4,LINC02401	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000286197,ENSG00000257762	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:103569731-103569739
L1FLnI_12q23.3c	L1	L1	L1FLnI	chr12	103607943	103617335	-	coding	STAB2	protein_coding	ANTISENSE	ENSG00000136011	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.3d	L1	L1	L1FLnI	chr12	104030668	104040805	+	coding	GLT8D2,AC078819.1	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000120820,ENSG00000216285	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.3e	L1	L1	L1FLnI	chr12	104388066	104398205	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CHST11	ENSG00000171310	57090	TXNRD1	ENSG00000198431	37759	None	None
L1FLnI_12q23.3f	L1	L1	L1FLnI	chr12	104877834	104887974	-	coding	SLC41A2	protein_coding	SENSE	ENSG00000136052	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.3g	L1	L1	L1FLnI	chr12	105007058	105017482	-	noncoding	C12orf45	protein_coding	ANTISENSE	ENSG00000151131	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.3h	L1	L1	L1FLnI	chr12	105242355	105252470	+	coding	C12orf75,AC078874.1	protein_coding,lncRNA	SENSE,SENSE	ENSG00000235162,ENSG00000286903	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.3i	L1	L1	L1FLnI	chr12	105513366	105523509	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC079851.1	ENSG00000286520	175659	C12orf75	ENSG00000235162	117269	None	None
L1FLnI_12q23.3j	L1	L1	L1FLnI	chr12	105624763	105634950	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	C12orf75	ENSG00000235162	228666	AC079851.1	ENSG00000286520	64218	None	None
L1FLnI_12q23.3k	L1	L1	L1FLnI	chr12	105772566	105782598	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CASC18	ENSG00000257859	28504	ST13P3	ENSG00000257773	233299	None	None
L1FLnI_12q23.3l	L1	L1	L1FLnI	chr12	105772566	105782585	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CASC18	ENSG00000257859	28504	ST13P3	ENSG00000257773	233312	None	None
L1FLnI_12q23.3m	L1	L1	L1FLnI	chr12	106161194	106170118	+	coding	AC010182.1	processed_pseudogene	SENSE	ENSG00000257611	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr12:106169751-106170066	None
L1FLnI_12q23.3n	L1	L1	L1FLnI	chr12	106206310	106216356	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CKAP4	ENSG00000136026	21525	AC010182.1	ENSG00000257611	33873	None	None
L1FLnI_12q23.3o	L1	L1	L1FLnI	chr12	106394366	106404471	+	coding	POLR3B	protein_coding	SENSE	ENSG00000013503	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.3p	L1	L1	L1FLnI	chr12	106464971	106475098	-	coding	POLR3B	protein_coding	ANTISENSE	ENSG00000013503	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.3q	L1	L1	L1FLnI	chr12	106471367	106481391	-	coding	POLR3B	protein_coding	ANTISENSE	ENSG00000013503	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.3r	L1	L1	L1FLnI	chr12	106530032	106539781	-	noncoding	AC079385.1	lncRNA	SENSE	ENSG00000257545	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.3s	L1	L1	L1FLnI	chr12	106545419	106555549	-	coding	AC079385.1	lncRNA	SENSE	ENSG00000257545	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.3t	L1	L1	L1FLnI	chr12	106660889	106671348	-	noncoding	AC079385.1,RFX4	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000257545,ENSG00000111783	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr12:106666976-106667142	None
L1FLnI_12q23.3u	L1	L1	L1FLnI	chr12	107182693	107191700	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC078929.1	ENSG00000257548	59379	AC007649.1	ENSG00000286678	28064	None	None
L1FLnI_12q23.3v	L1	L1	L1FLnI	chr12	107719242	107728764	+	coding	AC007622.1	processed_pseudogene	SENSE	ENSG00000240441	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q23.3w	L1	L1	L1FLnI	chr12	107937597	107948003	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC126177.1	ENSG00000257129	24977	WSCD2	ENSG00000075035	181285	None	None
L1FLnI_12q24.11	L1	L1	L1FLnI	chr12	108993449	109003473	+	coding	SVOP	protein_coding	ANTISENSE	ENSG00000166111	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q24.12a	L1	L1	L1FLnI	chr12	111828664	111838815	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MAPKAPK5-AS1	ENSG00000234608	949	ALDH2	ENSG00000111275	11132	None	None
L1FLnI_12q24.12b	L1	L1	L1FLnI	chr12	111828680	111838815	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MAPKAPK5-AS1	ENSG00000234608	949	ALDH2	ENSG00000111275	11148	None	None
L1FLnI_12q24.13a	L1	L1	L1FLnI	chr12	112617699	112627728	+	coding	RPH3A	protein_coding	SENSE	ENSG00000089169	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q24.13b	L1	L1	L1FLnI	chr12	112954097	112962981	-	coding	AC004551.1,OAS3	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000257452,ENSG00000111331	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q24.21	L1	L1	L1FLnI	chr12	115281624	115291650	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC078880.1	ENSG00000257519	11028	AC078880.3	ENSG00000271579	7938	None	None
L1FLnI_12q24.22a	L1	L1	L1FLnI	chr12	116753628	116764363	-	coding	RNFT2,AC090013.1	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000135119,ENSG00000239374	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr12:116759906-116759945
L1FLnI_12q24.22b	L1	L1	L1FLnI	chr12	116753859	116764363	-	coding	RNFT2,AC090013.1	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000135119,ENSG00000239374	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr12:116759906-116759945
L1FLnI_12q24.22c	L1	L1	L1FLnI	chr12	117622734	117632834	-	noncoding	KSR2	protein_coding	SENSE	ENSG00000171435	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q24.23a	L1	L1	L1FLnI	chr12	118657391	118667530	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL17P37	ENSG00000241590	70434	LINC02460	ENSG00000255714	8667	None	None
L1FLnI_12q24.23b	L1	L1	L1FLnI	chr12	118668084	118678233	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL17P37	ENSG00000241590	59731	LINC02460	ENSG00000255714	19360	None	None
L1FLnI_12q24.23c	L1	L1	L1FLnI	chr12	118792606	118803110	-	coding	LINC02439	lncRNA	SENSE	ENSG00000255814	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q24.23d	L1	L1	L1FLnI	chr12	118792606	118802693	-	noncoding	LINC02439	lncRNA	SENSE	ENSG00000255814	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q24.23e	L1	L1	L1FLnI	chr12	119104319	119114453	-	noncoding	SRRM4,AC084361.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000139767,ENSG00000257095	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr12:119114181-119114198
L1FLnI_12q24.23f	L1	L1	L1FLnI	chr12	119531924	119542054	-	noncoding	CCDC60,AC002070.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000183273,ENSG00000248636	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q24.23g	L1	L1	L1FLnI	chr12	119531940	119542054	-	noncoding	CCDC60,AC002070.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000183273,ENSG00000248636	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q24.32a	L1	L1	L1FLnI	chr12	125474204	125483752	+	coding	TMEM132B	protein_coding	SENSE	ENSG00000139364	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_12q24.32	L1	L1	L1FLI	chr12	126297997	126306043	-	coding	AC007368.1	lncRNA	ANTISENSE	ENSG00000255595	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q24.32b	L1	L1	L1FLnI	chr12	126320157	126330287	-	coding	AC007368.1	lncRNA	ANTISENSE	ENSG00000255595	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q24.32c	L1	L1	L1FLnI	chr12	127094107	127104131	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC079949.3	ENSG00000286016	25874	LINC02405	ENSG00000249345	33542	None	None
L1FLnI_12q24.32d	L1	L1	L1FLnI	chr12	127136792	127147267	-	noncoding	AC079949.3,AC079949.1,AC079949.5,AC079949.2	lncRNA,lncRNA,lncRNA,lncRNA	ANTISENSE,SENSE,ANTISENSE,ANTISENSE	ENSG00000286016,ENSG00000256001,ENSG00000286791,ENSG00000278266	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr12:127136762-127136874	chr12:127146171-127146235,chr12:127146077-127146081
L1FLnI_12q24.32e	L1	L1	L1FLnI	chr12	127136792	127146019	-	noncoding	AC079949.3,AC079949.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000286016,ENSG00000256001	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr12:127136762-127136874	None
L1FLnI_12q24.32f	L1	L1	L1FLnI	chr12	127862357	127872382	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC087894.2	ENSG00000279475	36071	AC087894.1	ENSG00000255757	4617	None	None
L1FLnI_12q24.32g	L1	L1	L1FLnI	chr12	128491352	128501475	-	coding	TMEM132C	protein_coding	ANTISENSE	ENSG00000181234	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q24.33a	L1	L1	L1FLnI	chr12	129037060	129047195	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM132D	ENSG00000151952	24530	NLRP9P1	ENSG00000256581	20397	None	None
L1FLnI_12q24.33b	L1	L1	L1FLnI	chr12	129055383	129065551	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM132D	ENSG00000151952	6174	NLRP9P1	ENSG00000256581	38720	None	None
L1FLnI_12q24.33c	L1	L1	L1FLnI	chr12	129312675	129322999	-	coding	TMEM132D	protein_coding	SENSE	ENSG00000151952	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q24.33d	L1	L1	L1FLnI	chr12	129797203	129807206	+	coding	TMEM132D	protein_coding	ANTISENSE	ENSG00000151952	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_12q24.33e	L1	L1	L1FLnI	chr12	133241443	133251591	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP006310.1	ENSG00000238443	2894	NA	NA	NA	None	None
L1FLnI_13q11a	L1	L1	L1FLnI	chr13	18178683	18188833	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356585.4	ENSG00000279924	218	FAM230C	ENSG00000279516	6464	chr13:18179655-18179797	None
L1FLnI_13q11b	L1	L1	L1FLnI	chr13	18178683	18188817	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356585.4	ENSG00000279924	218	FAM230C	ENSG00000279516	6480	chr13:18179655-18179797	None
L1FLnI_13q11c	L1	L1	L1FLnI	chr13	18499979	18510121	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	BNIP3P7	ENSG00000270496	7560	LINC00349	ENSG00000231238	28759	None	None
L1FLnI_13q12.11a	L1	L1	L1FLnI	chr13	18980272	18990360	+	coding	PHF2P2	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000226057	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q12.11b	L1	L1	L1FLnI	chr13	18980272	18990375	+	coding	PHF2P2	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000226057	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q12.11c	L1	L1	L1FLnI	chr13	19001928	19011038	-	noncoding	PHF2P2,LINC00442	transcribed_unprocessed_pseudogene,lncRNA	SENSE,ANTISENSE	ENSG00000226057,ENSG00000232685	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr13:19008256-19008260
L1FLnI_13q12.11d	L1	L1	L1FLnI	chr13	19103214	19113224	-	coding	AL137001.2	lncRNA	SENSE	ENSG00000287861	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q12.11e	L1	L1	L1FLnI	chr13	19269497	19279512	+	coding	ANKRD26P3	unprocessed_pseudogene	ANTISENSE	ENSG00000237636	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q12.11f	L1	L1	L1FLnI	chr13	19493288	19503313	+	coding	TPTE2	protein_coding	ANTISENSE	ENSG00000132958	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q12.11g	L1	L1	L1FLnI	chr13	19611048	19621390	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MPHOSPH8	ENSG00000196199	12269	LINC00350	ENSG00000225316	22445	None	None
L1FLnI_13q12.11h	L1	L1	L1FLnI	chr13	20749585	20758127	-	noncoding	EEF1AKMT1	protein_coding	SENSE	ENSG00000150456	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q12.11i	L1	L1	L1FLnI	chr13	21855230	21865409	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00424	ENSG00000226722	7354	RN7SL766P	ENSG00000244197	64385	None	None
L1FLnI_13q12.11j	L1	L1	L1FLnI	chr13	21861411	21870625	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00424	ENSG00000226722	2138	RN7SL766P	ENSG00000244197	70566	None	None
L1FLnI_13q12.11k	L1	L1	L1FLnI	chr13	22342588	22352708	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136962.1	ENSG00000276476	66062	AL512484.1	ENSG00000287357	236991	None	None
L1FLnI_13q12.11l	L1	L1	L1FLnI	chr13	22522836	22531381	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL136962.1	ENSG00000276476	246310	AL512484.1	ENSG00000287357	58318	None	None
L1FLnI_13q12.11m	L1	L1	L1FLnI	chr13	22571238	22581323	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL136962.1	ENSG00000276476	294712	AL512484.1	ENSG00000287357	8376	None	None
L1FLnI_13q12.11n	L1	L1	L1FLnI	chr13	22580413	22590236	-	noncoding	AL512484.1	lncRNA	SENSE	ENSG00000287357	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q12.12a	L1	L1	L1FLnI	chr13	22630552	22639900	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FTH1P7	ENSG00000232187	56123	AL512484.1	ENSG00000287357	36681	None	None
L1FLnI_13q12.12b	L1	L1	L1FLnI	chr13	23597559	23606621	+	coding	TNFRSF19	protein_coding	SENSE	ENSG00000127863	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q12.12c	L1	L1	L1FLnI	chr13	23775971	23786137	+	coding	MIPEP	protein_coding	ANTISENSE	ENSG00000027001	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q12.12d	L1	L1	L1FLnI	chr13	23912625	23921609	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C1QTNF9B	ENSG00000205863	15123	ANKRD20A19P	ENSG00000196593	17948	None	None
L1FLnI_13q12.12e	L1	L1	L1FLnI	chr13	24338992	24348480	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00566	ENSG00000261498	1871	CYCSP33	ENSG00000233545	52223	chr13:24339214-24339418	chr13:24340476-24340484
L1FLnI_13q12.12f	L1	L1	L1FLnI	chr13	24547925	24558057	-	coding	TPTE2P6	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000205822	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q12.12g	L1	L1	L1FLnI	chr13	24547925	24557518	-	coding	TPTE2P6	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000205822	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q12.12h	L1	L1	L1FLnI	chr13	24806149	24816168	-	coding	RNF17	protein_coding	ANTISENSE	ENSG00000132972	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q12.12i	L1	L1	L1FLnI	chr13	24830951	24841392	+	noncoding	RNF17	protein_coding	SENSE	ENSG00000132972	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q12.13a	L1	L1	L1FLnI	chr13	25633653	25643726	+	coding	ATP8A2	protein_coding	SENSE	ENSG00000132932	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q12.13b	L1	L1	L1FLnI	chr13	25892550	25902677	-	coding	ATP8A2	protein_coding	ANTISENSE	ENSG00000132932	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr13:25901702-25902006	chr13:25901926-25901933
L1FLnI_13q12.13c	L1	L1	L1FLnI	chr13	26444150	26456149	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDK8	ENSG00000132964	38912	AL353789.1	ENSG00000285929	32803	None	None
L1FLnI_13q12.3a	L1	L1	L1FLnI	chr13	28687579	28697843	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC46A3	ENSG00000139508	2221	POMP	ENSG00000132963	8620	None	None
L1FLnI_13q12.3b	L1	L1	L1FLnI	chr13	28914621	28925460	-	noncoding	MTUS2	protein_coding	ANTISENSE	ENSG00000132938	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q12.3c	L1	L1	L1FLnI	chr13	28993403	29002932	-	coding	MTUS2	protein_coding	ANTISENSE	ENSG00000132938	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q12.3d	L1	L1	L1FLnI	chr13	29204913	29214398	-	noncoding	MTUS2	protein_coding	ANTISENSE	ENSG00000132938	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q12.3e	L1	L1	L1FLnI	chr13	29298576	29307205	+	coding	MTUS2,GAPDHP69	protein_coding,processed_pseudogene	SENSE,SENSE	ENSG00000132938,ENSG00000223460	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr13:29306706-29306710
L1FLnI_13q12.3f	L1	L1	L1FLnI	chr13	29340160	29350690	-	noncoding	MTUS2	protein_coding	ANTISENSE	ENSG00000132938	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_13q12.3	L1	L1	L1FLI	chr13	29640694	29648739	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	UBL3	ENSG00000122042	115632	SLC7A1	ENSG00000139514	45006	None	None
L1FLnI_13q12.3g	L1	L1	L1FLnI	chr13	29661791	29672238	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC7A1	ENSG00000139514	66103	UBL3	ENSG00000122042	92133	None	None
L1FLnI_13q12.3h	L1	L1	L1FLnI	chr13	29823217	29833337	-	noncoding	UBL3	protein_coding	SENSE	ENSG00000122042	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q12.3i	L1	L1	L1FLnI	chr13	30255860	30265882	+	coding	KATNAL1	protein_coding	ANTISENSE	ENSG00000102781	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q12.3j	L1	L1	L1FLnI	chr13	30940998	30950258	-	noncoding	TEX26	protein_coding	ANTISENSE	ENSG00000175664	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q12.3k	L1	L1	L1FLnI	chr13	31289368	31299775	-	coding	B3GLCT	protein_coding	ANTISENSE	ENSG00000187676	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q12.3l	L1	L1	L1FLnI	chr13	31298816	31308845	+	coding	B3GLCT	protein_coding	SENSE	ENSG00000187676	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q12.3m	L1	L1	L1FLnI	chr13	31337093	31347020	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	B3GLCT	ENSG00000187676	4817	AL161616.2	ENSG00000278305	72969	None	None
L1FLnI_13q12.3n	L1	L1	L1FLnI	chr13	31578165	31588127	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RXFP2	ENSG00000133105	151399	AL161616.1	ENSG00000277319	94466	None	None
L1FLnI_13q13.1a	L1	L1	L1FLnI	chr13	31631941	31642041	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RXFP2	ENSG00000133105	97485	AL161616.1	ENSG00000277319	148242	chr13:31638653-31638913	None
L1FLnI_13q13.1b	L1	L1	L1FLnI	chr13	32601596	32611674	-	coding	PDS5B	protein_coding	ANTISENSE	ENSG00000083642	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q13.2a	L1	L1	L1FLnI	chr13	33414471	33424606	+	noncoding	AL139383.1	lncRNA	ANTISENSE	ENSG00000230490	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q13.2b	L1	L1	L1FLnI	chr13	33893243	33902331	+	noncoding	RFC3	protein_coding	SENSE	ENSG00000133119	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q13.2c	L1	L1	L1FLnI	chr13	33981176	33991192	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RFC3	ENSG00000133119	14618	AL160394.2	ENSG00000280431	88219	None	None
L1FLnI_13q13.2d	L1	L1	L1FLnI	chr13	34049131	34057738	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL160394.2	ENSG00000280431	21673	RFC3	ENSG00000133119	82573	None	None
L1FLnI_13q13.2e	L1	L1	L1FLnI	chr13	34479764	34489794	-	coding	LINC02343,LINC00457	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000271850,ENSG00000225179	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q13.2f	L1	L1	L1FLnI	chr13	34490872	34499606	+	noncoding	LINC02343,LINC00457	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000271850,ENSG00000225179	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q13.2g	L1	L1	L1FLnI	chr13	34741548	34751599	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL138690.2	ENSG00000273886	158946	AL161716.1	ENSG00000271901	44936	chr13:34748186-34748360	None
L1FLnI_13q13.2h	L1	L1	L1FLnI	chr13	34741552	34751599	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL138690.2	ENSG00000273886	158946	AL161716.1	ENSG00000271901	44940	chr13:34748186-34748360	None
L1FLnI_13q13.3a	L1	L1	L1FLnI	chr13	34982537	34992138	-	noncoding	NBEA	protein_coding	ANTISENSE	ENSG00000172915	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q13.3b	L1	L1	L1FLnI	chr13	35032123	35042958	-	noncoding	NBEA	protein_coding	ANTISENSE	ENSG00000172915	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q13.3c	L1	L1	L1FLnI	chr13	35266861	35276364	+	coding	NBEA	protein_coding	SENSE	ENSG00000172915	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q13.3d	L1	L1	L1FLnI	chr13	35315615	35326082	-	noncoding	NBEA	protein_coding	ANTISENSE	ENSG00000172915	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q13.3e	L1	L1	L1FLnI	chr13	35421652	35431782	-	coding	NBEA	protein_coding	ANTISENSE	ENSG00000172915	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q13.3f	L1	L1	L1FLnI	chr13	36007726	36017737	-	coding	DCLK1	protein_coding	SENSE	ENSG00000133083	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr13:36015174-36015533,chr13:36017471-36017790	None
L1FLnI_13q13.3g	L1	L1	L1FLnI	chr13	36007731	36017737	-	coding	DCLK1	protein_coding	SENSE	ENSG00000133083	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr13:36015174-36015533,chr13:36017471-36017790	None
L1FLnI_13q13.3h	L1	L1	L1FLnI	chr13	36398468	36406968	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCNA1	ENSG00000133101	24552	SPART	ENSG00000133104	28288	None	None
L1FLnI_13q13.3i	L1	L1	L1FLnI	chr13	36467811	36477934	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	H2ACP1	ENSG00000223383	12144	CCNA1	ENSG00000133101	24941	None	None
L1FLnI_13q13.3j	L1	L1	L1FLnI	chr13	37149454	37159482	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP1	ENSG00000202395	6870	AL356274.2	ENSG00000279511	2736	chr13:37149365-37149709	None
L1FLnI_13q13.3k	L1	L1	L1FLnI	chr13	37246842	37256881	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS12P24	ENSG00000230283	25596	LINC01048	ENSG00000230390	224586	None	None
L1FLnI_13q13.3l	L1	L1	L1FLnI	chr13	37390474	37401669	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS12P24	ENSG00000230283	169228	LINC01048	ENSG00000230390	79798	None	None
L1FLnI_13q13.3m	L1	L1	L1FLnI	chr13	37821776	37831799	-	coding	TRPC4	protein_coding	SENSE	ENSG00000133107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q13.3n	L1	L1	L1FLnI	chr13	38061874	38072018	+	coding	LINC02334,LINC00571	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000274317,ENSG00000223685	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q13.3o	L1	L1	L1FLnI	chr13	38073478	38083318	+	noncoding	LINC00571	lncRNA	ANTISENSE	ENSG00000223685	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q13.3p	L1	L1	L1FLnI	chr13	38100298	38109002	+	noncoding	LINC00571	lncRNA	ANTISENSE	ENSG00000223685	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q13.3q	L1	L1	L1FLnI	chr13	38108638	38118685	+	coding	LINC00571	lncRNA	ANTISENSE	ENSG00000223685	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q13.3r	L1	L1	L1FLnI	chr13	38227129	38237370	+	noncoding	LINC00571	lncRNA	ANTISENSE	ENSG00000223685	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q13.3s	L1	L1	L1FLnI	chr13	38833524	38843913	-	noncoding	FREM2	protein_coding	ANTISENSE	ENSG00000150893	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q13.3t	L1	L1	L1FLnI	chr13	39000319	39010375	-	coding	PROSER1	protein_coding	SENSE	ENSG00000120685	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q13.3u	L1	L1	L1FLnI	chr13	39070008	39080047	+	noncoding	AL354809.1	lncRNA	SENSE	ENSG00000273507	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr13:39074342-39074365,chr13:39076419-39076455
L1FLnI_13q13.3v	L1	L1	L1FLnI	chr13	39113501	39123970	-	noncoding	AL354809.1	lncRNA	ANTISENSE	ENSG00000273507	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q13.3w	L1	L1	L1FLnI	chr13	39113663	39122674	-	noncoding	AL354809.1	lncRNA	ANTISENSE	ENSG00000273507	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.11a	L1	L1	L1FLnI	chr13	39737697	39746745	+	coding	COG6	protein_coding	SENSE	ENSG00000133103	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.11b	L1	L1	L1FLnI	chr13	39847777	39857904	-	coding	AZU1P1,AL138702.1	processed_pseudogene,snoRNA	SENSE,SENSE	ENSG00000270444,ENSG00000212553	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.11c	L1	L1	L1FLnI	chr13	39941822	39951563	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138702.1	ENSG00000212553	84595	LINC00598	ENSG00000215483	127543	None	None
L1FLI_13q14.11a	L1	L1	L1FLI	chr13	40355288	40363335	+	coding	LINC00598	lncRNA	ANTISENSE	ENSG00000215483	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.11d	L1	L1	L1FLnI	chr13	40731421	40741445	+	coding	MRPS31	protein_coding	ANTISENSE	ENSG00000102738	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.11e	L1	L1	L1FLnI	chr13	40825321	40835334	+	coding	TPTE2P5	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000168852	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.11f	L1	L1	L1FLnI	chr13	40825321	40835326	+	coding	TPTE2P5	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000168852	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.11g	L1	L1	L1FLnI	chr13	40864073	40874098	-	coding	TPTE2P5	transcribed_unprocessed_pseudogene	SENSE	ENSG00000168852	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.11h	L1	L1	L1FLnI	chr13	40884081	40893600	+	coding	TPTE2P5,SUGT1P3	transcribed_unprocessed_pseudogene,transcribed_unprocessed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000168852,ENSG00000239827	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.11i	L1	L1	L1FLnI	chr13	41041810	41051914	-	coding	ELF1	protein_coding	SENSE	ENSG00000120690	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr13:41050054-41050392,chr13:41051727-41051956	None
L1FLnI_13q14.11j	L1	L1	L1FLnI	chr13	41473858	41484233	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	VWA8	ENSG00000102763	82602	RGCC	ENSG00000102760	2987	None	None
L1FLnI_13q14.11k	L1	L1	L1FLnI	chr13	41534253	41544368	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	VWA8	ENSG00000102763	22467	RGCC	ENSG00000102760	63382	None	None
L1FLI_13q14.11b	L1	L1	L1FLI	chr13	42423880	42431926	+	coding	LINC02341	lncRNA	SENSE	ENSG00000283554	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.11l	L1	L1	L1FLnI	chr13	42512477	42522935	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02341	ENSG00000283554	26521	TNFSF11	ENSG00000120659	39801	None	None
L1FLnI_13q14.11m	L1	L1	L1FLnI	chr13	42770417	42780905	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM216B	ENSG00000179813	645	TNFSF11	ENSG00000120659	162404	None	None
L1FLnI_13q14.11n	L1	L1	L1FLnI	chr13	43495982	43505468	+	noncoding	ENOX1	protein_coding	ANTISENSE	ENSG00000120658	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.11o	L1	L1	L1FLnI	chr13	43617045	43627249	-	coding	ENOX1,AL161714.1	protein_coding,lncRNA	SENSE,SENSE	ENSG00000120658,ENSG00000287842	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.11p	L1	L1	L1FLnI	chr13	43617419	43627249	-	coding	ENOX1,AL161714.1	protein_coding,lncRNA	SENSE,SENSE	ENSG00000120658,ENSG00000287842	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.11q	L1	L1	L1FLnI	chr13	43623265	43633099	-	noncoding	ENOX1,AL161714.1	protein_coding,lncRNA	SENSE,SENSE	ENSG00000120658,ENSG00000287842	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr13:43631271-43631584	None
L1FLnI_13q14.11r	L1	L1	L1FLnI	chr13	43710425	43719879	-	coding	ENOX1	protein_coding	SENSE	ENSG00000120658	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.11s	L1	L1	L1FLnI	chr13	43971207	43979714	-	coding	AL512506.3,NRAD1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000281883,ENSG00000233725	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.13a	L1	L1	L1FLnI	chr13	45615894	45626331	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	COX4I1P2	ENSG00000228869	45514	ERICH6B	ENSG00000165837	155	None	None
L1FLnI_13q14.13b	L1	L1	L1FLnI	chr13	45634673	45645129	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	COX4I1P2	ENSG00000228869	26716	ERICH6B	ENSG00000165837	18934	None	None
L1FLnI_13q14.13c	L1	L1	L1FLnI	chr13	45641532	45651567	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ERICH6B	ENSG00000165837	25793	COX4I1P2	ENSG00000228869	20278	None	None
L1FLnI_13q14.13d	L1	L1	L1FLnI	chr13	45663566	45673713	-	coding	COX4I1P2	processed_pseudogene	ANTISENSE	ENSG00000228869	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr13:45670219-45670581	None
L1FLnI_13q14.13e	L1	L1	L1FLnI	chr13	46214130	46224429	-	noncoding	LRRC63	protein_coding	ANTISENSE	ENSG00000173988	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.2a	L1	L1	L1FLnI	chr13	47057723	47066668	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GNG5P5	ENSG00000234590	240414	HTR2A	ENSG00000102468	160647	None	None
L1FLnI_13q14.2b	L1	L1	L1FLnI	chr13	47069906	47079294	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HTR2A	ENSG00000102468	172830	GNG5P5	ENSG00000234590	227788	None	None
L1FLnI_13q14.2c	L1	L1	L1FLnI	chr13	47099567	47108312	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HTR2A	ENSG00000102468	202491	GNG5P5	ENSG00000234590	198770	None	None
L1FLnI_13q14.2d	L1	L1	L1FLnI	chr13	47375241	47384776	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GNG5P5	ENSG00000234590	67940	RN7SL700P	ENSG00000244521	74165	None	None
L1FLnI_13q14.2e	L1	L1	L1FLnI	chr13	47459808	47470158	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL700P	ENSG00000244521	574	SUCLA2	ENSG00000136143	275578	None	None
L1FLnI_13q14.2f	L1	L1	L1FLnI	chr13	47560115	47570521	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL700P	ENSG00000244521	100881	SUCLA2	ENSG00000136143	175215	None	None
L1FLnI_13q14.2g	L1	L1	L1FLnI	chr13	47601030	47610654	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL700P	ENSG00000244521	141796	SUCLA2	ENSG00000136143	135082	None	None
L1FLnI_13q14.2h	L1	L1	L1FLnI	chr13	47628544	47638422	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL700P	ENSG00000244521	169310	SUCLA2	ENSG00000136143	107314	None	None
L1FLnI_13q14.2i	L1	L1	L1FLnI	chr13	47708640	47718808	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL700P	ENSG00000244521	249406	SUCLA2	ENSG00000136143	26928	None	None
L1FLnI_13q14.2j	L1	L1	L1FLnI	chr13	47731293	47741390	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL700P	ENSG00000244521	272059	SUCLA2	ENSG00000136143	4346	None	None
L1FLnI_13q14.2k	L1	L1	L1FLnI	chr13	47767025	47776770	-	noncoding	SUCLA2,RPL27AP8	protein_coding,processed_pseudogene	SENSE,SENSE	ENSG00000136143,ENSG00000229423	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.2l	L1	L1	L1FLnI	chr13	47778390	47788412	+	coding	SUCLA2	protein_coding	ANTISENSE	ENSG00000136143	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.2m	L1	L1	L1FLnI	chr13	47904468	47914610	+	noncoding	SUCLA2	protein_coding	ANTISENSE	ENSG00000136143	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr13:47904258-47904598	chr13:47904563-47904574
L1FLnI_13q14.2n	L1	L1	L1FLnI	chr13	48197317	48207453	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POLR2KP2	ENSG00000224510	62783	ITM2B	ENSG00000136156	25159	None	None
L1FLnI_13q14.2o	L1	L1	L1FLnI	chr13	48412631	48423015	+	coding	RB1,LPAR6	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000139687,ENSG00000139679	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chr13:48413268-48413551	chr13:48413060-48413071,chr13:48413092-48413103,chr13:48413105-48413124
L1FLnI_13q14.2p	L1	L1	L1FLnI	chr13	48462057	48472066	+	coding	RB1	protein_coding	SENSE	ENSG00000139687	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.2q	L1	L1	L1FLnI	chr13	48606439	48615879	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYSLTR2	ENSG00000152207	37832	RB1	ENSG00000139687	7003	None	None
L1FLnI_13q14.2r	L1	L1	L1FLnI	chr13	48661228	48671204	-	noncoding	CYSLTR2	protein_coding	ANTISENSE	ENSG00000152207	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.2s	L1	L1	L1FLnI	chr13	48693037	48702020	+	coding	CYSLTR2	protein_coding	SENSE	ENSG00000152207	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.2t	L1	L1	L1FLnI	chr13	49013128	49023128	-	coding	FNDC3A	protein_coding	ANTISENSE	ENSG00000102531	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.2u	L1	L1	L1FLnI	chr13	49114683	49124997	+	noncoding	FNDC3A	protein_coding	SENSE	ENSG00000102531	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.2v	L1	L1	L1FLnI	chr13	49152015	49162035	-	coding	FNDC3A	protein_coding	ANTISENSE	ENSG00000102531	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.2w	L1	L1	L1FLnI	chr13	49158038	49167269	-	noncoding	FNDC3A	protein_coding	ANTISENSE	ENSG00000102531	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.2x	L1	L1	L1FLnI	chr13	49877490	49886379	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136301.1	ENSG00000276436	84183	RNY4P30	ENSG00000222148	3255	None	None
L1FLnI_13q14.2y	L1	L1	L1FLnI	chr13	50179797	50189830	-	coding	DLEU1	lncRNA	ANTISENSE	ENSG00000176124	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.2z	L1	L1	L1FLnI	chr13	50293802	50302836	-	coding	DLEU1	lncRNA	ANTISENSE	ENSG00000176124	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.3a	L1	L1	L1FLnI	chr13	50502546	50512669	-	coding	DLEU1	lncRNA	ANTISENSE	ENSG00000176124	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.3b	L1	L1	L1FLnI	chr13	50767790	50777905	-	coding	DLEU1,DLEU7	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000176124,ENSG00000186047	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.3c	L1	L1	L1FLnI	chr13	50852372	50862566	+	noncoding	DLEU1,RNASEH2B-AS1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000176124,ENSG00000233672	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.3d	L1	L1	L1FLnI	chr13	50978556	50988570	+	coding	RNASEH2B	protein_coding	SENSE	ENSG00000136104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.3e	L1	L1	L1FLnI	chr13	51509219	51519338	-	coding	INTS6-AS1	lncRNA	ANTISENSE	ENSG00000236778	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.3f	L1	L1	L1FLnI	chr13	51523317	51533017	+	coding	INTS6-AS1	lncRNA	SENSE	ENSG00000236778	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.3g	L1	L1	L1FLnI	chr13	51563537	51572148	+	coding	RNU6-65P	snRNA	SENSE	ENSG00000252141	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.3h	L1	L1	L1FLnI	chr13	51649254	51658049	-	coding	WDFY2	protein_coding	ANTISENSE	ENSG00000139668	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.3i	L1	L1	L1FLnI	chr13	51689698	51699829	-	coding	WDFY2	protein_coding	ANTISENSE	ENSG00000139668	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.3j	L1	L1	L1FLnI	chr13	51979129	51989567	+	noncoding	ATP7B	protein_coding	ANTISENSE	ENSG00000123191	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr13:51981469-51981488,chr13:51981496-51981520
L1FLnI_13q14.3k	L1	L1	L1FLnI	chr13	52051010	52060467	+	coding	NEK5	protein_coding	ANTISENSE	ENSG00000197168	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.3l	L1	L1	L1FLnI	chr13	52051010	52060449	+	coding	NEK5	protein_coding	ANTISENSE	ENSG00000197168	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.3m	L1	L1	L1FLnI	chr13	52232702	52242135	+	noncoding	AL158066.1,TPTE2P2	lncRNA,transcribed_unprocessed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000217576,ENSG00000272281	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.3n	L1	L1	L1FLnI	chr13	52269142	52279159	-	coding	AL158066.1,TPTE2P2	lncRNA,transcribed_unprocessed_pseudogene	SENSE,SENSE	ENSG00000217576,ENSG00000272281	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.3o	L1	L1	L1FLnI	chr13	52564353	52573806	-	noncoding	AL137058.1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000244471	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.3p	L1	L1	L1FLnI	chr13	52564353	52573415	-	noncoding	AL137058.1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000244471	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.3q	L1	L1	L1FLnI	chr13	52714857	52725244	-	noncoding	CNMD	protein_coding	SENSE	ENSG00000136110	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.3r	L1	L1	L1FLnI	chr13	53093189	53101824	-	coding	LINC01065	lncRNA	SENSE	ENSG00000237092	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q14.3s	L1	L1	L1FLnI	chr13	54040346	54050466	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00558	ENSG00000261517	100386	LINC00458	ENSG00000234787	65317	None	None
L1FLnI_13q14.3t	L1	L1	L1FLnI	chr13	54215493	54225525	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00458	ENSG00000234787	73174	MIR1297	ENSG00000283126	86447	chr13:54225256-54225323	None
L1FLnI_13q14.3u	L1	L1	L1FLnI	chr13	54280877	54291256	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1297	ENSG00000283126	20716	LINC00458	ENSG00000234787	138558	None	None
L1FLnI_13q14.3v	L1	L1	L1FLnI	chr13	54280882	54291256	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1297	ENSG00000283126	20716	LINC00458	ENSG00000234787	138563	None	None
L1FLnI_13q14.3w	L1	L1	L1FLnI	chr13	54403912	54414476	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1297	ENSG00000283126	91864	RPL13AP25	ENSG00000136149	26228	None	None
L1FLnI_13q14.3x	L1	L1	L1FLnI	chr13	54405409	54414084	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1297	ENSG00000283126	93361	RPL13AP25	ENSG00000136149	26620	None	None
L1FLnI_13q14.3y	L1	L1	L1FLnI	chr13	54483236	54493289	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL13AP25	ENSG00000136149	41921	AL442636.1	ENSG00000287460	79065	None	None
L1FLnI_13q21.1a	L1	L1	L1FLnI	chr13	55162898	55171729	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02335	ENSG00000278630	1408	MIR5007	ENSG00000264387	2725	None	None
L1FLnI_13q21.1b	L1	L1	L1FLnI	chr13	55240813	55251335	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR5007	ENSG00000264387	66265	AL354821.1	ENSG00000274090	284362	None	chr13:55246788-55246798,chr13:55245281-55245283
L1FLnI_13q21.1c	L1	L1	L1FLnI	chr13	55272045	55282210	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL354821.1	ENSG00000274090	253487	MIR5007	ENSG00000264387	97497	None	None
L1FLnI_13q21.1d	L1	L1	L1FLnI	chr13	55335710	55345785	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL354821.1	ENSG00000274090	189912	MIR5007	ENSG00000264387	161162	None	None
L1FLnI_13q21.1e	L1	L1	L1FLnI	chr13	55879902	55889647	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNF4GP1	ENSG00000228611	109553	AL354821.1	ENSG00000274090	296378	None	None
L1FLnI_13q21.1f	L1	L1	L1FLnI	chr13	55943853	55954297	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL354821.1	ENSG00000274090	360329	HNF4GP1	ENSG00000228611	44903	None	None
L1FLnI_13q21.1g	L1	L1	L1FLnI	chr13	56241239	56251632	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP6	ENSG00000201665	633652	SPATA2P1	ENSG00000228319	24297	None	None
L1FLnI_13q21.1h	L1	L1	L1FLnI	chr13	56284352	56293291	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP6	ENSG00000201665	591993	SPATA2P1	ENSG00000228319	67410	None	None
L1FLnI_13q21.1i	L1	L1	L1FLnI	chr13	56400879	56410246	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPATA2P1	ENSG00000228319	183937	RN7SKP6	ENSG00000201665	475038	None	None
L1FLnI_13q21.1j	L1	L1	L1FLnI	chr13	56625203	56635433	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SPATA2P1	ENSG00000228319	408261	RN7SKP6	ENSG00000201665	249851	None	None
L1FLnI_13q21.1k	L1	L1	L1FLnI	chr13	56759346	56769861	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPATA2P1	ENSG00000228319	542404	RN7SKP6	ENSG00000201665	115423	None	None
L1FLnI_13q21.1l	L1	L1	L1FLnI	chr13	56759346	56769851	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPATA2P1	ENSG00000228319	542404	RN7SKP6	ENSG00000201665	115433	None	None
L1FLnI_13q21.1m	L1	L1	L1FLnI	chr13	57193716	57202666	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO2P3	ENSG00000230009	1713	PRR20FP	ENSG00000271140	20084	None	None
L1FLnI_13q21.1n	L1	L1	L1FLnI	chr13	57226146	57236564	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO2P3	ENSG00000230009	21347	SLC25A5P4	ENSG00000234421	78175	None	None
L1FLnI_13q21.1o	L1	L1	L1FLnI	chr13	57516838	57525463	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL31P53	ENSG00000225352	125320	PCDH17	ENSG00000118946	106281	None	None
L1FLnI_13q21.1p	L1	L1	L1FLnI	chr13	57575642	57585525	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PCDH17	ENSG00000118946	46219	RPL31P53	ENSG00000225352	184124	None	None
L1FLnI_13q21.1q	L1	L1	L1FLnI	chr13	57802930	57812167	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PCDH17	ENSG00000118946	73619	RNA5SP30	ENSG00000202422	179183	None	None
L1FLnI_13q21.1r	L1	L1	L1FLnI	chr13	58101050	58109638	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02338	ENSG00000277448	56189	RNA5SP30	ENSG00000202422	109586	None	None
L1FLnI_13q21.1s	L1	L1	L1FLnI	chr13	58127590	58136814	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02338	ENSG00000277448	29013	RNA5SP30	ENSG00000202422	136126	None	None
L1FLnI_13q21.1t	L1	L1	L1FLnI	chr13	58174380	58185432	-	coding	LINC02338	lncRNA	ANTISENSE	ENSG00000277448	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q21.1u	L1	L1	L1FLnI	chr13	58176468	58185432	-	coding	LINC02338	lncRNA	ANTISENSE	ENSG00000277448	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q21.1v	L1	L1	L1FLnI	chr13	58210641	58219799	+	noncoding	LINC00374	lncRNA	ANTISENSE	ENSG00000232954	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q21.1w	L1	L1	L1FLnI	chr13	58335439	58344451	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161423.1	ENSG00000276208	33062	LINC00374	ENSG00000232954	102322	None	None
L1FLnI_13q21.1x	L1	L1	L1FLnI	chr13	58673409	58682143	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DNAJA1P1	ENSG00000223717	68904	CTAGE16P	ENSG00000214335	142383	None	None
L1FLnI_13q21.1y	L1	L1	L1FLnI	chr13	58784368	58794812	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN2P39	ENSG00000214281	215520	DNAJA1P1	ENSG00000223717	32135	None	None
L1FLnI_13q21.1z	L1	L1	L1FLnI	chr13	58784914	58794812	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN2P39	ENSG00000214281	215520	DNAJA1P1	ENSG00000223717	32681	None	None
L1FLnI_13q21.2a	L1	L1	L1FLnI	chr13	59026074	59034672	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	POLR3KP1	ENSG00000232647	36790	HMGN2P39	ENSG00000214281	15470	None	None
L1FLnI_13q21.2b	L1	L1	L1FLnI	chr13	59287894	59298348	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPP40P2	ENSG00000271190	24503	RNU7-88P	ENSG00000239003	181722	None	None
L1FLnI_13q21.2c	L1	L1	L1FLnI	chr13	59465552	59474398	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPP40P2	ENSG00000271190	202161	RNU7-88P	ENSG00000239003	5672	None	None
L1FLnI_13q21.2d	L1	L1	L1FLnI	chr13	59557052	59567400	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DIAPH3	ENSG00000139734	98183	RNU7-88P	ENSG00000239003	76920	None	None
L1FLnI_13q21.2e	L1	L1	L1FLnI	chr13	59558852	59567400	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DIAPH3	ENSG00000139734	98183	RNU7-88P	ENSG00000239003	78720	None	None
L1FLnI_13q21.2f	L1	L1	L1FLnI	chr13	59587184	59597261	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-88P	ENSG00000239003	107052	DIAPH3	ENSG00000139734	68322	None	chr13:59588085-59588107,chr13:59588132-59588137
L1FLnI_13q21.2g	L1	L1	L1FLnI	chr13	60245397	60255551	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TARDBPP2	ENSG00000238213	19225	LINC00434	ENSG00000227336	30451	None	None
L1FLnI_13q21.2h	L1	L1	L1FLnI	chr13	60657071	60665670	-	noncoding	LINC00378	lncRNA	ANTISENSE	ENSG00000225249	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr13:60662792-60662809
L1FLnI_13q21.2i	L1	L1	L1FLnI	chr13	60706254	60716284	+	coding	LINC00378	lncRNA	SENSE	ENSG00000225249	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q21.2j	L1	L1	L1FLnI	chr13	60799376	60809493	-	coding	LINC00378	lncRNA	ANTISENSE	ENSG00000225249	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q21.2k	L1	L1	L1FLnI	chr13	60826703	60836846	-	coding	LINC00378	lncRNA	ANTISENSE	ENSG00000225249	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q21.2l	L1	L1	L1FLnI	chr13	60863568	60874252	-	noncoding	LINC00378	lncRNA	ANTISENSE	ENSG00000225249	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q21.2m	L1	L1	L1FLnI	chr13	60864559	60874252	-	noncoding	LINC00378	lncRNA	ANTISENSE	ENSG00000225249	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q21.2n	L1	L1	L1FLnI	chr13	61263890	61273079	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3169	ENSG00000266663	64010	PCDH20	ENSG00000280165	136606	None	None
L1FLnI_13q21.2o	L1	L1	L1FLnI	chr13	61320073	61330237	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3169	ENSG00000266663	120193	PCDH20	ENSG00000280165	79448	None	None
L1FLnI_13q21.2p	L1	L1	L1FLnI	chr13	61682053	61690972	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02339	ENSG00000279797	254107	RAC1P8	ENSG00000234033	114178	None	None
L1FLnI_13q21.31a	L1	L1	L1FLnI	chr13	62255558	62264342	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01075	ENSG00000230142	5611	LINC01074	ENSG00000227611	56963	None	None
L1FLnI_13q21.31b	L1	L1	L1FLnI	chr13	62506835	62516510	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445668.1	ENSG00000286469	22841	SQSTM1P1	ENSG00000271465	99919	None	None
L1FLnI_13q21.31c	L1	L1	L1FLnI	chr13	62992059	63001602	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL354810.1	ENSG00000273550	33066	LINC00448	ENSG00000228669	195345	None	None
L1FLnI_13q21.31d	L1	L1	L1FLnI	chr13	63270418	63278991	+	noncoding	LINC00376	lncRNA	ANTISENSE	ENSG00000227564	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q21.31e	L1	L1	L1FLnI	chr13	63775938	63786396	-	noncoding	RNU6-81P	snRNA	ANTISENSE	ENSG00000202478	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q21.31f	L1	L1	L1FLnI	chr13	64210564	64220678	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LGMNP1	ENSG00000214269	737419	LINC00355	ENSG00000227674	134520	None	None
L1FLnI_13q21.31g	L1	L1	L1FLnI	chr13	64564072	64574778	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LGMNP1	ENSG00000214269	383319	LINC00355	ENSG00000227674	488028	None	None
L1FLnI_13q21.31h	L1	L1	L1FLnI	chr13	64824249	64834670	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00355	ENSG00000227674	748205	LGMNP1	ENSG00000214269	123427	None	None
L1FLnI_13q21.31i	L1	L1	L1FLnI	chr13	64976680	64986985	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	STARP1	ENSG00000214266	322870	LGMNP1	ENSG00000214269	17284	None	None
L1FLnI_13q21.31j	L1	L1	L1FLnI	chr13	65026243	65035181	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	STARP1	ENSG00000214266	274674	LGMNP1	ENSG00000214269	66847	None	None
L1FLnI_13q21.31k	L1	L1	L1FLnI	chr13	65103415	65113118	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STARP1	ENSG00000214266	196737	LGMNP1	ENSG00000214269	144019	None	None
L1FLnI_13q21.32a	L1	L1	L1FLnI	chr13	65431915	65442015	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STARP1	ENSG00000214266	120962	HNRNPA3P5	ENSG00000236565	345917	None	None
L1FLnI_13q21.32b	L1	L1	L1FLnI	chr13	65547098	65556809	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA3P5	ENSG00000236565	231123	STARP1	ENSG00000214266	236145	None	None
L1FLnI_13q21.32c	L1	L1	L1FLnI	chr13	65581677	65591824	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	STARP1	ENSG00000214266	270724	HNRNPA3P5	ENSG00000236565	196108	None	None
L1FLnI_13q21.32d	L1	L1	L1FLnI	chr13	65670407	65679455	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPA3P5	ENSG00000236565	108477	STARP1	ENSG00000214266	359454	None	None
L1FLnI_13q21.32e	L1	L1	L1FLnI	chr13	65730623	65739828	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STARP1	ENSG00000214266	419670	HNRNPA3P5	ENSG00000236565	48104	None	None
L1FLnI_13q21.32f	L1	L1	L1FLnI	chr13	66253264	66263288	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TRIM60P19	ENSG00000235737	5709	MIR4704	ENSG00000263561	34940	None	None
L1FLnI_13q21.32g	L1	L1	L1FLnI	chr13	66415863	66424813	+	noncoding	PCDH9	protein_coding	ANTISENSE	ENSG00000184226	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q21.32h	L1	L1	L1FLnI	chr13	66643128	66654186	+	noncoding	PCDH9	protein_coding	ANTISENSE	ENSG00000184226	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q21.32i	L1	L1	L1FLnI	chr13	66733984	66744007	+	coding	PCDH9	protein_coding	ANTISENSE	ENSG00000184226	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q21.32j	L1	L1	L1FLnI	chr13	67448776	67458494	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00364	ENSG00000230040	68782	AL512452.1	ENSG00000287876	119130	None	None
L1FLnI_13q21.32k	L1	L1	L1FLnI	chr13	67584845	67594970	+	noncoding	AL512452.1	lncRNA	ANTISENSE	ENSG00000287876	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q21.32l	L1	L1	L1FLnI	chr13	67679749	67689788	-	coding	AL512452.1	lncRNA	SENSE	ENSG00000287876	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q21.32m	L1	L1	L1FLnI	chr13	67694516	67703338	+	noncoding	AL512452.1	lncRNA	ANTISENSE	ENSG00000287876	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q21.33a	L1	L1	L1FLnI	chr13	68789470	68799841	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00550	ENSG00000281778	61443	RN7SL761P	ENSG00000243671	95389	None	None
L1FLnI_13q21.33b	L1	L1	L1FLnI	chr13	69209235	69218109	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00383	ENSG00000235221	3757	SNRPFP3	ENSG00000225501	107179	None	None
L1FLnI_13q21.33c	L1	L1	L1FLnI	chr13	69477368	69487490	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	KLHL1	ENSG00000150361	213104	SRSF1P1	ENSG00000224640	68633	None	None
L1FLnI_13q21.33d	L1	L1	L1FLnI	chr13	69663333	69673468	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SRSF1P1	ENSG00000224640	254598	KLHL1	ENSG00000150361	27126	None	None
L1FLnI_13q21.33e	L1	L1	L1FLnI	chr13	69804818	69813952	+	noncoding	KLHL1	protein_coding	ANTISENSE	ENSG00000150361	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q21.33f	L1	L1	L1FLnI	chr13	70205480	70215392	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ATXN8OS	ENSG00000230223	56388	RNU6-54P	ENSG00000202433	244072	None	None
L1FLnI_13q21.33g	L1	L1	L1FLnI	chr13	71384062	71394204	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DACH1	ENSG00000276644	43762	RABEPKP1	ENSG00000225801	86827	None	None
L1FLnI_13q21.33h	L1	L1	L1FLnI	chr13	72058627	72068893	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS10P21	ENSG00000232881	144449	AL139003.1	ENSG00000212377	385009	None	None
L1FLnI_13q21.33i	L1	L1	L1FLnI	chr13	72264984	72275124	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL139003.1	ENSG00000212377	178778	RPS10P21	ENSG00000232881	350806	None	None
L1FLnI_13q21.33j	L1	L1	L1FLnI	chr13	72606748	72616787	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL356754.1	ENSG00000199282	19938	RPL21P110	ENSG00000226617	86906	None	None
L1FLnI_13q22.1a	L1	L1	L1FLnI	chr13	72827777	72837384	-	coding	PIBF1	protein_coding	ANTISENSE	ENSG00000083535	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q22.1b	L1	L1	L1FLnI	chr13	73637029	73647051	+	coding	LINC00393	lncRNA	ANTISENSE	ENSG00000224853	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q22.1c	L1	L1	L1FLnI	chr13	74235446	74245470	-	coding	LINC00402	lncRNA	ANTISENSE	ENSG00000235532	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr13:74243976-74244119	None
L1FLnI_13q22.1d	L1	L1	L1FLnI	chr13	74342805	74353230	+	noncoding	AL353660.1	lncRNA	SENSE	ENSG00000286330	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q22.1e	L1	L1	L1FLnI	chr13	74422828	74432854	+	coding	LINC00381	lncRNA	SENSE	ENSG00000226240	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q22.1f	L1	L1	L1FLnI	chr13	74532950	74542869	+	coding	AL355390.2	lncRNA	SENSE	ENSG00000281167	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q22.1g	L1	L1	L1FLnI	chr13	74532950	74542856	+	coding	AL355390.2	lncRNA	SENSE	ENSG00000281167	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q22.2a	L1	L1	L1FLnI	chr13	74955652	74966096	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RIOK3P1	ENSG00000225944	125572	RNU6-38P	ENSG00000206812	143491	None	None
L1FLnI_13q22.2b	L1	L1	L1FLnI	chr13	75240655	75250814	-	coding	LINC01078	lncRNA	ANTISENSE	ENSG00000223880	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q22.2c	L1	L1	L1FLnI	chr13	75240671	75250814	-	coding	LINC01078	lncRNA	ANTISENSE	ENSG00000223880	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q22.2d	L1	L1	L1FLnI	chr13	75727126	75737277	-	coding	AL137782.1,LMO7	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000261553,ENSG00000136153	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q22.2e	L1	L1	L1FLnI	chr13	76049769	76058323	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01034	ENSG00000224933	35268	RN7SL571P	ENSG00000243274	76608	chr13:76054216-76054677	None
L1FLnI_13q22.2f	L1	L1	L1FLnI	chr13	76108471	76117835	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01034	ENSG00000224933	93970	RN7SL571P	ENSG00000243274	17096	chr13:76116654-76116924	chr13:76114784-76114788
L1FLnI_13q22.2g	L1	L1	L1FLnI	chr13	76612325	76622351	-	coding	AL136441.1	lncRNA	SENSE	ENSG00000285572	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q22.3a	L1	L1	L1FLnI	chr13	77195529	77205561	+	coding	MYCBP2	protein_coding	ANTISENSE	ENSG00000005810	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q22.3b	L1	L1	L1FLnI	chr13	77437335	77446895	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SCEL	ENSG00000136155	88779	AL159158.1	ENSG00000285714	14488	None	None
L1FLnI_13q22.3c	L1	L1	L1FLnI	chr13	77665047	77674637	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL450447.1	ENSG00000285746	2421	SLAIN1	ENSG00000139737	23050	None	None
L1FLnI_13q22.3d	L1	L1	L1FLnI	chr13	77789074	77798091	+	noncoding	EDNRB-AS1	lncRNA	SENSE	ENSG00000225579	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q22.3e	L1	L1	L1FLnI	chr13	77955646	77965289	+	coding	EDNRB,OBI1-AS1,AL139002.1	protein_coding,lncRNA,lncRNA	ANTISENSE,SENSE,ANTISENSE	ENSG00000136160,ENSG00000234377,ENSG00000233379	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q22.3f	L1	L1	L1FLnI	chr13	78108775	78117421	-	noncoding	OBI1-AS1	lncRNA	ANTISENSE	ENSG00000234377	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q31.1a	L1	L1	L1FLnI	chr13	78512708	78522893	-	coding	OBI1-AS1	lncRNA	ANTISENSE	ENSG00000234377	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q31.1b	L1	L1	L1FLnI	chr13	78522573	78532699	+	noncoding	OBI1-AS1	lncRNA	SENSE	ENSG00000234377	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q31.1c	L1	L1	L1FLnI	chr13	78854416	78864552	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CCT5P2	ENSG00000230584	44367	HSPD1P8	ENSG00000215357	3208	None	None
L1FLnI_13q31.1d	L1	L1	L1FLnI	chr13	79296568	79306564	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	BCAS2P3	ENSG00000226670	129683	RBM26	ENSG00000139746	5260	None	None
L1FLnI_13q31.1e	L1	L1	L1FLnI	chr13	79296568	79306563	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	BCAS2P3	ENSG00000226670	129683	RBM26	ENSG00000139746	5261	None	None
L1FLnI_13q31.1f	L1	L1	L1FLnI	chr13	79556897	79567166	+	noncoding	LINC01068	lncRNA	SENSE	ENSG00000227676	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q31.1g	L1	L1	L1FLnI	chr13	79816557	79826718	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00382	ENSG00000229175	45868	LINC01038	ENSG00000229011	10872	None	None
L1FLnI_13q31.1h	L1	L1	L1FLnI	chr13	79836170	79846317	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01038	ENSG00000229011	30485	LINC00382	ENSG00000229175	26269	chr13:79838166-79838318	None
L1FLnI_13q31.1i	L1	L1	L1FLnI	chr13	79883536	79893736	+	noncoding	LINC00382	lncRNA	SENSE	ENSG00000229175	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q31.1j	L1	L1	L1FLnI	chr13	79919731	79930012	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158064.1	ENSG00000284196	11519	LINC00382	ENSG00000229175	1689	None	None
L1FLnI_13q31.1k	L1	L1	L1FLnI	chr13	79947556	79956964	+	coding	AL158064.1	lncRNA	ANTISENSE	ENSG00000284196	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q31.1l	L1	L1	L1FLnI	chr13	79956369	79965114	+	noncoding	AL158064.1	lncRNA	ANTISENSE	ENSG00000284196	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q31.1m	L1	L1	L1FLnI	chr13	80087992	80097805	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137781.1	ENSG00000285684	17928	AL158064.1	ENSG00000284196	13352	None	None
L1FLnI_13q31.1n	L1	L1	L1FLnI	chr13	80513363	80523482	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-61P	ENSG00000202398	143829	HNRNPA1P31	ENSG00000227862	95616	None	None
L1FLnI_13q31.1o	L1	L1	L1FLnI	chr13	80513363	80523480	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-61P	ENSG00000202398	143829	HNRNPA1P31	ENSG00000227862	95618	None	None
L1FLnI_13q31.1p	L1	L1	L1FLnI	chr13	80573849	80582907	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-61P	ENSG00000202398	204315	HNRNPA1P31	ENSG00000227862	36191	None	None
L1FLnI_13q31.1q	L1	L1	L1FLnI	chr13	80658841	80667789	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590807.1	ENSG00000286746	29388	PWWP2AP1	ENSG00000226683	1814	None	None
L1FLnI_13q31.1r	L1	L1	L1FLnI	chr13	80659119	80667789	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590807.1	ENSG00000286746	29388	PWWP2AP1	ENSG00000226683	2092	None	None
L1FLnI_13q31.1s	L1	L1	L1FLnI	chr13	80686098	80696250	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PWWP2AP1	ENSG00000226683	29071	AL590807.1	ENSG00000286746	927	None	None
L1FLnI_13q31.1t	L1	L1	L1FLnI	chr13	80698716	80707828	-	noncoding	AL590807.1	lncRNA	SENSE	ENSG00000286746	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q31.1u	L1	L1	L1FLnI	chr13	81063595	81073738	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DPPA3P3	ENSG00000270415	41128	LINC00377	ENSG00000229246	18904	None	None
L1FLnI_13q31.1v	L1	L1	L1FLnI	chr13	81459112	81468635	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTMAP5	ENSG00000214182	221276	AL353633.1	ENSG00000229309	156705	None	None
L1FLnI_13q31.1w	L1	L1	L1FLnI	chr13	81708780	81717631	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445255.1	ENSG00000286385	1060577	PTMAP5	ENSG00000214182	17708	None	None
L1FLnI_13q31.1x	L1	L1	L1FLnI	chr13	81744716	81753699	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PTMAP5	ENSG00000214182	53644	AL445255.1	ENSG00000286385	1024509	None	None
L1FLnI_13q31.1y	L1	L1	L1FLnI	chr13	81744716	81753691	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PTMAP5	ENSG00000214182	53644	AL445255.1	ENSG00000286385	1024517	None	None
L1FLnI_13q31.1z	L1	L1	L1FLnI	chr13	81804153	81815743	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTMAP5	ENSG00000214182	113081	AL445255.1	ENSG00000286385	962465	None	None
L1FLnI_13q31.1aa	L1	L1	L1FLnI	chr13	81954437	81963729	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTMAP5	ENSG00000214182	263365	AL445255.1	ENSG00000286385	814479	None	None
L1FLnI_13q31.1ba	L1	L1	L1FLnI	chr13	82041851	82051880	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PTMAP5	ENSG00000214182	350779	AL445255.1	ENSG00000286385	726328	None	None
L1FLnI_13q31.1ca	L1	L1	L1FLnI	chr13	82041851	82051908	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PTMAP5	ENSG00000214182	350779	AL445255.1	ENSG00000286385	726300	None	None
L1FLnI_13q31.1da	L1	L1	L1FLnI	chr13	82225520	82235652	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PTMAP5	ENSG00000214182	534448	AL445255.1	ENSG00000286385	542556	None	None
L1FLnI_13q31.1ea	L1	L1	L1FLnI	chr13	82466995	82475823	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445255.1	ENSG00000286385	302385	PTMAP5	ENSG00000214182	775923	None	None
L1FLnI_13q31.1fa	L1	L1	L1FLnI	chr13	82801512	82811715	+	noncoding	AL445255.1	lncRNA	ANTISENSE	ENSG00000286385	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q31.1ga	L1	L1	L1FLnI	chr13	82948823	82957673	+	noncoding	AL445255.1	lncRNA	ANTISENSE	ENSG00000286385	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q31.1ha	L1	L1	L1FLnI	chr13	83458026	83468411	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-67P	ENSG00000222791	159859	AL353688.1	ENSG00000286446	181838	None	None
L1FLnI_13q31.1ia	L1	L1	L1FLnI	chr13	84213698	84223132	+	noncoding	AL162493.1	lncRNA	SENSE	ENSG00000288016	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q31.1ja	L1	L1	L1FLnI	chr13	84213698	84222740	+	noncoding	AL162493.1	lncRNA	SENSE	ENSG00000288016	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q31.1ka	L1	L1	L1FLnI	chr13	84449664	84459887	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTND4P1	ENSG00000228597	60216	AL162493.1	ENSG00000288016	1061	None	None
L1FLnI_13q31.1la	L1	L1	L1FLnI	chr13	84449691	84459887	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTND4P1	ENSG00000228597	60216	AL162493.1	ENSG00000288016	1088	None	None
L1FLnI_13q31.1ma	L1	L1	L1FLnI	chr13	85119706	85129721	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00375	ENSG00000226370	40786	AL160154.1	ENSG00000286906	14902	None	None
L1FLnI_13q31.1na	L1	L1	L1FLnI	chr13	85911294	85921419	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MOB1AP1	ENSG00000228241	47580	AL162373.1	ENSG00000278580	73762	None	None
L1FLnI_13q31.1oa	L1	L1	L1FLnI	chr13	85990448	85999727	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL354994.1	ENSG00000232252	61086	MOB1AP1	ENSG00000228241	20915	None	None
L1FLnI_13q31.1pa	L1	L1	L1FLnI	chr13	86645108	86654894	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TXNL1P1	ENSG00000231879	70606	AL445207.1	ENSG00000287880	182374	None	None
L1FLnI_13q31.1qa	L1	L1	L1FLnI	chr13	86843959	86853601	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TXNL1P1	ENSG00000231879	117906	LINC00430	ENSG00000233528	55985	None	None
L1FLnI_13q31.1ra	L1	L1	L1FLnI	chr13	86990133	86999544	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00430	ENSG00000233528	53025	UBBP5	ENSG00000228074	219460	None	None
L1FLnI_13q31.2a	L1	L1	L1FLnI	chr13	87227133	87239144	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LIN28AP2	ENSG00000228473	140328	UBBP5	ENSG00000228074	7864	None	None
L1FLnI_13q31.2b	L1	L1	L1FLnI	chr13	87230013	87239144	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LIN28AP2	ENSG00000228473	140328	UBBP5	ENSG00000228074	10744	None	None
L1FLnI_13q31.2c	L1	L1	L1FLnI	chr13	87362236	87372357	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LIN28AP2	ENSG00000228473	7115	UBBP5	ENSG00000228074	142967	None	None
L1FLnI_13q31.2d	L1	L1	L1FLnI	chr13	89084387	89094418	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GRPEL2P1	ENSG00000233211	105602	AL162573.1	ENSG00000288552	47382	None	None
L1FLnI_13q31.2e	L1	L1	L1FLnI	chr13	89287554	89296980	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SP3P	ENSG00000225530	64180	LINC00440	ENSG00000234660	7314	None	None
L1FLnI_13q31.3a	L1	L1	L1FLnI	chr13	89470217	89480524	-	noncoding	LINC02336,LINC01040	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000271395,ENSG00000226037	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q31.3b	L1	L1	L1FLnI	chr13	90515769	90525713	+	noncoding	LINC01049	lncRNA	SENSE	ENSG00000234384	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q31.3c	L1	L1	L1FLnI	chr13	90534565	90543327	+	noncoding	LINC01049	lncRNA	SENSE	ENSG00000234384	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q31.3d	L1	L1	L1FLnI	chr13	90660484	90670505	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01049	ENSG00000234384	125404	RNU6-75P	ENSG00000251753	111261	None	None
L1FLnI_13q31.3e	L1	L1	L1FLnI	chr13	90660484	90670495	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01049	ENSG00000234384	125404	RNU6-75P	ENSG00000251753	111271	None	None
L1FLnI_13q31.3f	L1	L1	L1FLnI	chr13	90809408	90819837	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-75P	ENSG00000251753	27539	LINC00410	ENSG00000231674	71117	None	None
L1FLnI_13q31.3g	L1	L1	L1FLnI	chr13	91432703	91442509	-	coding	GPC5	protein_coding	ANTISENSE	ENSG00000179399	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q31.3h	L1	L1	L1FLnI	chr13	91951861	91961697	+	noncoding	GPC5	protein_coding	SENSE	ENSG00000179399	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q31.3i	L1	L1	L1FLnI	chr13	92277263	92287384	+	noncoding	GPC5	protein_coding	SENSE	ENSG00000179399	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q31.3j	L1	L1	L1FLnI	chr13	92513234	92523273	+	coding	GPC5	protein_coding	SENSE	ENSG00000179399	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_13q31.3	L1	L1	L1ORF2	chr13	92684549	92692594	-	coding	GPC5	protein_coding	ANTISENSE	ENSG00000179399	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q31.3k	L1	L1	L1FLnI	chr13	92748977	92758988	+	coding	GPC5	protein_coding	SENSE	ENSG00000179399	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q31.3l	L1	L1	L1FLnI	chr13	93169473	93178806	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL354811.2	ENSG00000288001	12021	AL354811.1	ENSG00000278177	47806	None	None
L1FLnI_13q31.3m	L1	L1	L1FLnI	chr13	93236256	93246924	-	coding	GPC6	protein_coding	ANTISENSE	ENSG00000183098	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q31.3n	L1	L1	L1FLnI	chr13	93490020	93500037	-	coding	GPC6	protein_coding	ANTISENSE	ENSG00000183098	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q31.3o	L1	L1	L1FLnI	chr13	94368701	94378701	+	coding	GPC6	protein_coding	SENSE	ENSG00000183098	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q31.3p	L1	L1	L1FLnI	chr13	94368701	94378691	+	coding	GPC6	protein_coding	SENSE	ENSG00000183098	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q32.1a	L1	L1	L1FLnI	chr13	94523153	94533298	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DCT	ENSG00000080166	43471	TGDS	ENSG00000088451	40756	None	None
L1FLnI_13q32.1b	L1	L1	L1FLnI	chr13	95086606	95096190	+	coding	ABCC4	protein_coding	ANTISENSE	ENSG00000125257	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q32.1c	L1	L1	L1FLnI	chr13	95086606	95095786	+	coding	ABCC4	protein_coding	ANTISENSE	ENSG00000125257	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q32.1d	L1	L1	L1FLnI	chr13	95664019	95673137	-	coding	DNAJC3-DT	lncRNA	SENSE	ENSG00000247400	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q32.1e	L1	L1	L1FLnI	chr13	95733201	95744337	-	coding	DNAJC3	protein_coding	ANTISENSE	ENSG00000102580	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr13:95733726-95733730
L1FLnI_13q32.1f	L1	L1	L1FLnI	chr13	95912080	95921861	+	coding	UGGT2	protein_coding	ANTISENSE	ENSG00000102595	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q32.1g	L1	L1	L1FLnI	chr13	96037510	96046988	+	coding	UGGT2	protein_coding	ANTISENSE	ENSG00000102595	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q32.1h	L1	L1	L1FLnI	chr13	96325682	96335708	-	coding	HS6ST3	protein_coding	ANTISENSE	ENSG00000185352	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q32.1i	L1	L1	L1FLnI	chr13	96519550	96528490	-	noncoding	HS6ST3	protein_coding	ANTISENSE	ENSG00000185352	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q32.1j	L1	L1	L1FLnI	chr13	96596865	96605664	-	noncoding	HS6ST3	protein_coding	ANTISENSE	ENSG00000185352	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q32.1k	L1	L1	L1FLnI	chr13	96769372	96779824	+	coding	HS6ST3	protein_coding	SENSE	ENSG00000185352	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr13:96772428-96772738	None
L1FLnI_13q32.1l	L1	L1	L1FLnI	chr13	96769372	96779815	+	coding	HS6ST3	protein_coding	SENSE	ENSG00000185352	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr13:96772428-96772738	None
L1FLnI_13q32.1m	L1	L1	L1FLnI	chr13	96914903	96925365	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HSP90AB6P	ENSG00000235137	29082	TULP3P1	ENSG00000234267	15916	None	None
L1FLnI_13q32.1n	L1	L1	L1FLnI	chr13	97048684	97058510	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00456	ENSG00000233124	110241	OXGR1	ENSG00000165621	53954	None	None
L1FLnI_13q32.1o	L1	L1	L1FLnI	chr13	97154897	97163608	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00456	ENSG00000233124	5143	OXGR1	ENSG00000165621	160167	None	None
L1FLnI_13q32.2a	L1	L1	L1FLnI	chr13	97604161	97614267	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PSMA6P4	ENSG00000271625	127702	AL359502.1	ENSG00000226134	60744	None	None
L1FLnI_13q32.2b	L1	L1	L1FLnI	chr13	97666910	97676940	-	coding	AL359502.1	lncRNA	SENSE	ENSG00000226134	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q32.2c	L1	L1	L1FLnI	chr13	97726914	97736943	+	coding	AL359502.2	lncRNA	ANTISENSE	ENSG00000286544	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q32.2d	L1	L1	L1FLnI	chr13	97726914	97736951	+	coding	AL359502.2	lncRNA	ANTISENSE	ENSG00000286544	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_13q32.3	L1	L1	L1ORF2	chr13	100697082	100705139	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMTC4	ENSG00000125247	21989	NALCN-AS1	ENSG00000233009	3186	None	None
L1FLnI_13q32.3a	L1	L1	L1FLnI	chr13	100963708	100973837	-	NA	NALCN-AS1	lncRNA	ANTISENSE	ENSG00000233009	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q32.3b	L1	L1	L1FLnI	chr13	101040441	101050888	-	noncoding	NALCN-AS1	lncRNA	ANTISENSE	ENSG00000233009	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q33.1a	L1	L1	L1FLnI	chr13	101469572	101481169	+	noncoding	ITGBL1	protein_coding	SENSE	ENSG00000198542	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q33.1b	L1	L1	L1FLnI	chr13	101538553	101548699	-	coding	ITGBL1	protein_coding	ANTISENSE	ENSG00000198542	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q33.1c	L1	L1	L1FLnI	chr13	102150613	102159181	+	coding	FGF14	protein_coding	ANTISENSE	ENSG00000102466	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr13:102159136-102159140
L1FLnI_13q33.1d	L1	L1	L1FLnI	chr13	102518522	102528676	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FGF14	ENSG00000102466	116065	LINC00555	ENSG00000261057	60696	None	None
L1FLnI_13q33.1e	L1	L1	L1FLnI	chr13	102538544	102547717	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FGF14	ENSG00000102466	136087	LINC00555	ENSG00000261057	41655	None	None
L1FLnI_13q33.1f	L1	L1	L1FLnI	chr13	102538549	102547717	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FGF14	ENSG00000102466	136092	LINC00555	ENSG00000261057	41655	None	None
L1FLnI_13q33.1g	L1	L1	L1FLnI	chr13	103257827	103267047	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL162717.1	ENSG00000285789	76613	SLC10A2	ENSG00000125255	191410	None	None
L1FLnI_13q33.1h	L1	L1	L1FLnI	chr13	103258408	103267047	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL162717.1	ENSG00000285789	76613	SLC10A2	ENSG00000125255	191991	None	None
L1FLnI_13q33.1i	L1	L1	L1FLnI	chr13	103824432	103833976	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL136524.1	ENSG00000287734	291954	ATP6V1G1P7	ENSG00000230474	379464	None	None
L1FLnI_13q33.2a	L1	L1	L1FLnI	chr13	104339851	104350008	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P45	ENSG00000225823	464319	AL136524.1	ENSG00000287734	205594	None	None
L1FLnI_13q33.2b	L1	L1	L1FLnI	chr13	104358323	104367660	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P45	ENSG00000225823	446667	AL136524.1	ENSG00000287734	224066	None	None
L1FLnI_13q33.2c	L1	L1	L1FLnI	chr13	105379753	105388845	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P45	ENSG00000225823	564684	AL138954.1	ENSG00000286929	21971	None	None
L1FLnI_13q33.2d	L1	L1	L1FLnI	chr13	105883957	105894015	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL138701.1	ENSG00000252550	3508	LINC00343	ENSG00000226620	86418	None	None
L1FLnI_13q33.2e	L1	L1	L1FLnI	chr13	106210042	106220055	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP38	ENSG00000222682	54552	AL139379.1	ENSG00000286780	12076	None	None
L1FLnI_13q33.3a	L1	L1	L1FLnI	chr13	106777747	106787904	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP24	ENSG00000174408	75912	AL162574.2	ENSG00000278698	3468	None	None
L1FLnI_13q33.3b	L1	L1	L1FLnI	chr13	106928833	106938863	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL162574.3	ENSG00000279157	3087	AL162574.1	ENSG00000277863	24734	None	None
L1FLnI_13q33.3c	L1	L1	L1FLnI	chr13	107920158	107930206	-	coding	AL359436.1	lncRNA	ANTISENSE	ENSG00000286343	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q33.3d	L1	L1	L1FLnI	chr13	107920174	107930206	-	coding	AL359436.1	lncRNA	ANTISENSE	ENSG00000286343	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q33.3e	L1	L1	L1FLnI	chr13	107937183	107946616	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359436.1	ENSG00000286343	3680	LIG4	ENSG00000174405	260823	None	None
L1FLnI_13q33.3f	L1	L1	L1FLnI	chr13	107937183	107946587	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359436.1	ENSG00000286343	3680	LIG4	ENSG00000174405	260852	None	None
L1FLnI_13q33.3g	L1	L1	L1FLnI	chr13	108164227	108173769	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359436.1	ENSG00000286343	230724	LIG4	ENSG00000174405	33670	None	None
L1FLnI_13q33.3h	L1	L1	L1FLnI	chr13	108326267	108335467	+	noncoding	AL138694.1	lncRNA	SENSE	ENSG00000283384	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr13:108326398-108326537	chr13:108335391-108335405
L1FLnI_13q33.3i	L1	L1	L1FLnI	chr13	108509974	108519995	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MYO16	ENSG00000041515	76157	HCFC2P1	ENSG00000232087	28157	chr13:108518411-108518807	None
L1FLnI_13q33.3j	L1	L1	L1FLnI	chr13	108734617	108744782	-	noncoding	MYO16	protein_coding	ANTISENSE	ENSG00000041515	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q33.3k	L1	L1	L1FLnI	chr13	109012464	109022452	-	coding	MYO16	protein_coding	ANTISENSE	ENSG00000041515	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q33.3l	L1	L1	L1FLnI	chr13	109501813	109511946	-	noncoding	AL163541.1	lncRNA	SENSE	ENSG00000285534	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q33.3m	L1	L1	L1FLnI	chr13	109550603	109560059	+	noncoding	AL163541.1	lncRNA	ANTISENSE	ENSG00000285534	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q34a	L1	L1	L1FLnI	chr13	110666097	110676217	+	noncoding	CARS2	protein_coding	ANTISENSE	ENSG00000134905	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q34b	L1	L1	L1FLnI	chr13	110990491	111000207	+	coding	LINC00431	transcribed_unprocessed_pseudogene	SENSE	ENSG00000225760	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q34c	L1	L1	L1FLnI	chr13	111254003	111262837	+	coding	ARHGEF7	protein_coding	SENSE	ENSG00000102606	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_13q34d	L1	L1	L1FLnI	chr13	111495610	111505772	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL359649.1	ENSG00000204398	82429	TEX29	ENSG00000153495	151361	None	None
L1FLnI_13q34e	L1	L1	L1FLnI	chr13	111886333	111895385	-	coding	LINC00354	lncRNA	ANTISENSE	ENSG00000226903	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr13:111893371-111893381,chr13:111893388-111893399
L1FLnI_13q34f	L1	L1	L1FLnI	chr13	111931201	111940898	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL138691.1	ENSG00000200072	111180	LINC00354	ENSG00000226903	29937	None	None
L1FLnI_14q11.2a	L1	L1	L1FLnI	chr14	18283320	18293364	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CR383658.1	ENSG00000215398	40362	ABBA01010928.1	ENSG00000283274	2225698	None	None
L1FLnI_14q11.2b	L1	L1	L1FLnI	chr14	18563790	18573144	+	noncoding	CR383656.10,CR383656.13	lncRNA,transcribed_unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000257959,ENSG00000258367	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q11.2c	L1	L1	L1FLnI	chr14	19122650	19131607	-	coding	DUXAP9,AL589743.5,NBEAP5	transcribed_processed_pseudogene,lncRNA,transcribed_unprocessed_pseudogene	ANTISENSE,SENSE,ANTISENSE	ENSG00000225210,ENSG00000277128,ENSG00000277710	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q11.2d	L1	L1	L1FLnI	chr14	19268388	19277346	+	noncoding	AL589743.8,AL589743.1	transcribed_unprocessed_pseudogene,transcribed_processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000285990,ENSG00000244306	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q11.2e	L1	L1	L1FLnI	chr14	19765625	19774295	-	noncoding	OR4N2,OR4M1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000176294,ENSG00000176299	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q11.2f	L1	L1	L1FLnI	chr14	19814202	19823732	-	noncoding	OR4N2	protein_coding	ANTISENSE	ENSG00000176294	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q11.2g	L1	L1	L1FLnI	chr14	20036643	20045446	-	coding	OR4U1P	unprocessed_pseudogene	ANTISENSE	ENSG00000258899	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q11.2h	L1	L1	L1FLnI	chr14	20100159	20110308	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR4T1P	ENSG00000258641	5896	OR4K17	ENSG00000176230	431	None	None
L1FLnI_14q11.2i	L1	L1	L1FLnI	chr14	20230076	20239801	-	coding	OR11H7,OR11H4	polymorphic_pseudogene,protein_coding	ANTISENSE,ANTISENSE	ENSG00000258806,ENSG00000176198	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q11.2j	L1	L1	L1FLnI	chr14	20276549	20286694	+	coding	TTC5	protein_coding	ANTISENSE	ENSG00000136319	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q11.2k	L1	L1	L1FLnI	chr14	20856625	20866768	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNASE1	ENSG00000129538	53770	AL133371.3	ENSG00000259130	3510	None	None
L1FLnI_14q11.2l	L1	L1	L1FLnI	chr14	20907100	20917245	+	coding	AL355922.4,AL355922.3	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000258918,ENSG00000258772	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q11.2m	L1	L1	L1FLnI	chr14	21756575	21766785	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL4P1	ENSG00000240954	5029	TRAV6	ENSG00000211780	1704	None	None
L1FLnI_14q11.2n	L1	L1	L1FLnI	chr14	22345423	22355565	+	coding	AC244502.1	lncRNA	ANTISENSE	ENSG00000251002	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q11.2o	L1	L1	L1FLnI	chr14	22345423	22355535	+	coding	AC244502.1	lncRNA	ANTISENSE	ENSG00000251002	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q11.2p	L1	L1	L1FLnI	chr14	22615143	22625263	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR6J1	ENSG00000255804	5666	ABHD4	ENSG00000100439	1928	None	None
L1FLnI_14q11.2q	L1	L1	L1FLnI	chr14	22671553	22681655	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL160314.1	ENSG00000242061	12443	OR6J1	ENSG00000255804	27201	None	None
L1FLnI_14q11.2r	L1	L1	L1FLnI	chr14	23756227	23765856	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL160237.3	ENSG00000270618	1806	BRD7P1	ENSG00000259043	5077	None	None
L1FLnI_14q12a	L1	L1	L1FLnI	chr14	24487937	24498069	+	coding	AL132800.1	lncRNA	SENSE	ENSG00000258744	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12b	L1	L1	L1FLnI	chr14	24522456	24532568	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL132800.1	ENSG00000258744	13768	CTSG	ENSG00000100448	40950	None	None
L1FLnI_14q12c	L1	L1	L1FLnI	chr14	24722749	24733138	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136018.1	ENSG00000258657	64975	STXBP6	ENSG00000168952	76518	None	None
L1FLnI_14q12d	L1	L1	L1FLnI	chr14	24764664	24774508	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136018.1	ENSG00000258657	106890	STXBP6	ENSG00000168952	35148	None	None
L1FLnI_14q12e	L1	L1	L1FLnI	chr14	25163588	25173704	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02286	ENSG00000258098	7274	HMGN2P6	ENSG00000257179	93360	None	None
L1FLnI_14q12f	L1	L1	L1FLnI	chr14	25179929	25190039	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02286	ENSG00000258098	23615	HMGN2P6	ENSG00000257179	77025	None	None
L1FLnI_14q12g	L1	L1	L1FLnI	chr14	25315691	25326779	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR7K1P	ENSG00000258275	30985	HMGN2P6	ENSG00000257179	48355	None	None
L1FLnI_14q12h	L1	L1	L1FLnI	chr14	25315691	25326669	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR7K1P	ENSG00000258275	31095	HMGN2P6	ENSG00000257179	48355	None	None
L1FLnI_14q12i	L1	L1	L1FLnI	chr14	25336851	25345550	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR7K1P	ENSG00000258275	12214	HMGN2P6	ENSG00000257179	69515	None	None
L1FLnI_14q12j	L1	L1	L1FLnI	chr14	25364270	25374180	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL079352.1	ENSG00000257976	57013	OR7K1P	ENSG00000258275	5581	None	None
L1FLnI_14q12k	L1	L1	L1FLnI	chr14	25564246	25574732	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02306	ENSG00000257986	72572	AL079352.1	ENSG00000257976	132012	None	None
L1FLnI_14q12l	L1	L1	L1FLnI	chr14	25580249	25589834	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02306	ENSG00000257986	57470	AL079352.1	ENSG00000257976	148015	None	None
L1FLnI_14q12m	L1	L1	L1FLnI	chr14	25770821	25780967	-	coding	LINC02306	lncRNA	SENSE	ENSG00000257986	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12n	L1	L1	L1FLnI	chr14	25778365	25788372	-	coding	LINC02306	lncRNA	SENSE	ENSG00000257986	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12o	L1	L1	L1FLnI	chr14	25851436	25861500	-	coding	LINC02306	lncRNA	SENSE	ENSG00000257986	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12p	L1	L1	L1FLnI	chr14	25975358	25985832	+	noncoding	LINC02306,AL132633.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000257986,ENSG00000285633	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12q	L1	L1	L1FLnI	chr14	26005910	26017074	+	noncoding	LINC02306	lncRNA	ANTISENSE	ENSG00000257986	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12r	L1	L1	L1FLnI	chr14	26102925	26112924	+	coding	LINC02306	lncRNA	ANTISENSE	ENSG00000257986	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12s	L1	L1	L1FLnI	chr14	26305119	26315562	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CYB5AP5	ENSG00000257503	96695	NOVA1	ENSG00000139910	127528	None	None
L1FLI_14q12	L1	L1	L1FLI	chr14	26628255	26636301	-	coding	LINC02588,AL110292.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000257842,ENSG00000258081	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12t	L1	L1	L1FLnI	chr14	26639324	26649756	-	coding	LINC02588,AL110292.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000257842,ENSG00000258081	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12u	L1	L1	L1FLnI	chr14	26672817	26682874	-	coding	LINC02588,AL110292.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000257842,ENSG00000258081	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12v	L1	L1	L1FLnI	chr14	27357046	27367155	-	coding	AL390334.1	transcribed_processed_pseudogene	SENSE	ENSG00000258932	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12w	L1	L1	L1FLnI	chr14	27500434	27511092	-	noncoding	AL390334.1	transcribed_processed_pseudogene	SENSE	ENSG00000258932	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12x	L1	L1	L1FLnI	chr14	27669561	27679595	+	coding	AL390334.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000258932	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12y	L1	L1	L1FLnI	chr14	27669561	27679615	+	coding	AL390334.1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000258932	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12z	L1	L1	L1FLnI	chr14	27845294	27855523	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL390334.1	ENSG00000258932	8	BNIP3P1	ENSG00000197358	408867	None	chr14:27845387-27845433,chr14:27845307-27845320,chr14:27845333-27845348
L1FLnI_14q12aa	L1	L1	L1FLnI	chr14	28164499	28174641	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390334.1	ENSG00000258932	319213	BNIP3P1	ENSG00000197358	89749	None	None
L1FLnI_14q12ba	L1	L1	L1FLnI	chr14	28184944	28194970	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL390334.1	ENSG00000258932	339658	BNIP3P1	ENSG00000197358	69420	None	None
L1FLnI_14q12ca	L1	L1	L1FLnI	chr14	28210681	28222002	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BNIP3P1	ENSG00000197358	42388	AL390334.1	ENSG00000258932	365395	None	None
L1FLnI_14q12da	L1	L1	L1FLnI	chr14	28312004	28322023	-	coding	AL139023.1	lncRNA	ANTISENSE	ENSG00000257869	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12ea	L1	L1	L1FLnI	chr14	28531156	28541313	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02300	ENSG00000258175	50910	RPL26P3	ENSG00000240179	40794	None	None
L1FLnI_14q12fa	L1	L1	L1FLnI	chr14	28635172	28645295	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	BTF3P2	ENSG00000258282	27946	LINC02300	ENSG00000258175	21549	None	None
L1FLnI_14q12ga	L1	L1	L1FLnI	chr14	28842553	28851875	+	coding	LINC02327	lncRNA	SENSE	ENSG00000258038	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12ha	L1	L1	L1FLnI	chr14	29023591	29033002	-	noncoding	LINC02326,AL135878.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000257523,ENSG00000258028	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12ia	L1	L1	L1FLnI	chr14	29771666	29781801	+	coding	PRKD1	protein_coding	ANTISENSE	ENSG00000184304	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12ja	L1	L1	L1FLnI	chr14	29954880	29964997	-	noncoding	PRKD1,AL133372.3,AL133372.2	protein_coding,lncRNA,lncRNA	SENSE,ANTISENSE,SENSE	ENSG00000184304,ENSG00000257904,ENSG00000248975	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12ka	L1	L1	L1FLnI	chr14	29968563	29978985	+	coding	PRKD1,AL133372.3,AL133372.2	protein_coding,lncRNA,lncRNA	ANTISENSE,SENSE,ANTISENSE	ENSG00000184304,ENSG00000257904,ENSG00000248975	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12la	L1	L1	L1FLnI	chr14	30094746	30104132	+	coding	PRKD1,AL133372.2	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000184304,ENSG00000248975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12ma	L1	L1	L1FLnI	chr14	30141920	30151461	+	noncoding	PRKD1,AL133372.2	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000184304,ENSG00000248975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12na	L1	L1	L1FLnI	chr14	30360039	30370068	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL133372.2	ENSG00000248975	62996	AL079305.1	ENSG00000279032	40	None	chr14:30363493-30363502
L1FLnI_14q12oa	L1	L1	L1FLnI	chr14	30404010	30414367	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	G2E3-AS1	ENSG00000257636	23625	AL079305.1	ENSG00000279032	30895	None	chr14:30411829-30411835
L1FLnI_14q12pa	L1	L1	L1FLnI	chr14	30470546	30480562	+	coding	G2E3-AS1	lncRNA	ANTISENSE	ENSG00000257636	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12qa	L1	L1	L1FLnI	chr14	30470546	30480585	+	coding	G2E3-AS1	lncRNA	ANTISENSE	ENSG00000257636	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12ra	L1	L1	L1FLnI	chr14	30660456	30669557	+	coding	SCFD1	protein_coding	SENSE	ENSG00000092108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12sa	L1	L1	L1FLnI	chr14	30684311	30694337	-	coding	SCFD1	protein_coding	ANTISENSE	ENSG00000092108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12ta	L1	L1	L1FLnI	chr14	31490623	31501146	+	noncoding	NUBPL	protein_coding	SENSE	ENSG00000151413	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12ua	L1	L1	L1FLnI	chr14	31614805	31625245	-	noncoding	NUBPL	protein_coding	ANTISENSE	ENSG00000151413	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12va	L1	L1	L1FLnI	chr14	31633591	31643736	-	coding	NUBPL	protein_coding	ANTISENSE	ENSG00000151413	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12wa	L1	L1	L1FLnI	chr14	31806126	31816269	-	coding	NUBPL	protein_coding	ANTISENSE	ENSG00000151413	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12xa	L1	L1	L1FLnI	chr14	32234099	32244254	-	coding	AL136298.2	processed_pseudogene	SENSE	ENSG00000258619	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12ya	L1	L1	L1FLnI	chr14	32268942	32278168	+	coding	AL136298.3	processed_pseudogene	ANTISENSE	ENSG00000259086	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12za	L1	L1	L1FLnI	chr14	32385576	32394235	-	noncoding	AKAP6,AL136298.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000151320,ENSG00000258580	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12ab	L1	L1	L1FLnI	chr14	32456844	32467254	+	coding	AKAP6	protein_coding	SENSE	ENSG00000151320	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr14:32459234-32459247	None
L1FLnI_14q12bb	L1	L1	L1FLnI	chr14	32513815	32523827	+	coding	AKAP6	protein_coding	SENSE	ENSG00000151320	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12cb	L1	L1	L1FLnI	chr14	32738741	32747809	-	noncoding	AKAP6	protein_coding	ANTISENSE	ENSG00000151320	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12db	L1	L1	L1FLnI	chr14	32738741	32747792	-	noncoding	AKAP6	protein_coding	ANTISENSE	ENSG00000151320	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12eb	L1	L1	L1FLnI	chr14	32850662	32860808	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL049781.1	ENSG00000280281	18438	AKAP6	ENSG00000151320	12978	None	None
L1FLnI_14q12fb	L1	L1	L1FLnI	chr14	32871105	32881194	-	noncoding	AL049781.1	TEC	ANTISENSE	ENSG00000280281	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q12gb	L1	L1	L1FLnI	chr14	32871476	32881194	-	noncoding	AL049781.1	TEC	ANTISENSE	ENSG00000280281	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q13.1a	L1	L1	L1FLnI	chr14	33084563	33094626	+	coding	NPAS3	protein_coding	SENSE	ENSG00000151322	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q13.1b	L1	L1	L1FLnI	chr14	34146574	34156725	+	coding	EGLN3	protein_coding	ANTISENSE	ENSG00000129521	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q13.1c	L1	L1	L1FLnI	chr14	34387715	34398159	+	noncoding	EGLN3	protein_coding	ANTISENSE	ENSG00000129521	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q13.2	L1	L1	L1FLnI	chr14	35174253	35183742	-	coding	PRORP,AL121594.1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000100890,ENSG00000258790	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q13.3a	L1	L1	L1FLnI	chr14	36142158	36152190	-	coding	LINC00609,PTCSC3	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000257585,ENSG00000259104	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q13.3b	L1	L1	L1FLnI	chr14	36155946	36166191	-	coding	LINC00609,PTCSC3	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000257585,ENSG00000259104	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr14:36163593-36163634	chr14:36162256-36162258
L1FLnI_14q13.3c	L1	L1	L1FLnI	chr14	36181056	36191194	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PTCSC3	ENSG00000259104	4588	AL162511.1	ENSG00000258844	22006	None	None
L1FLnI_14q13.3d	L1	L1	L1FLnI	chr14	36181056	36191179	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PTCSC3	ENSG00000259104	4588	AL162511.1	ENSG00000258844	22021	None	None
L1FLnI_14q13.3e	L1	L1	L1FLnI	chr14	36408230	36418342	+	coding	AL132857.2	lncRNA	SENSE	ENSG00000283098	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q13.3f	L1	L1	L1FLnI	chr14	36693425	36703582	-	coding	SLC25A21	protein_coding	SENSE	ENSG00000183032	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q13.3g	L1	L1	L1FLnI	chr14	36892052	36902183	-	coding	SLC25A21	protein_coding	SENSE	ENSG00000183032	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q13.3h	L1	L1	L1FLnI	chr14	37184267	37194461	+	noncoding	RNU6-273P	snRNA	SENSE	ENSG00000252746	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q13.3i	L1	L1	L1FLnI	chr14	37289830	37299951	+	coding	MIPOL1	protein_coding	SENSE	ENSG00000151338	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr14:37292489-37292493
L1FLnI_14q13.3j	L1	L1	L1FLnI	chr14	37350420	37360433	-	coding	MIPOL1	protein_coding	ANTISENSE	ENSG00000151338	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1a	L1	L1	L1FLnI	chr14	37498130	37508258	+	noncoding	MIPOL1	protein_coding	SENSE	ENSG00000151338	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1b	L1	L1	L1FLnI	chr14	37766298	37776331	-	coding	TTC6	protein_coding	ANTISENSE	ENSG00000139865	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1c	L1	L1	L1FLnI	chr14	37780144	37790267	-	noncoding	TTC6	protein_coding	ANTISENSE	ENSG00000139865	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1d	L1	L1	L1FLnI	chr14	37949796	37959959	-	coding	TTC6	protein_coding	ANTISENSE	ENSG00000139865	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1e	L1	L1	L1FLnI	chr14	37949812	37959959	-	coding	TTC6	protein_coding	ANTISENSE	ENSG00000139865	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1f	L1	L1	L1FLnI	chr14	38020785	38029817	+	noncoding	TTC6	protein_coding	SENSE	ENSG00000139865	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1g	L1	L1	L1FLnI	chr14	38262874	38272914	-	noncoding	AL355835.1	lncRNA	ANTISENSE	ENSG00000259072	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1h	L1	L1	L1FLnI	chr14	38299238	38307805	+	noncoding	AL355835.1	lncRNA	SENSE	ENSG00000259072	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1i	L1	L1	L1FLnI	chr14	38409384	38418615	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355835.1	ENSG00000259072	38046	AL357094.1	ENSG00000271468	186640	None	None
L1FLnI_14q21.1j	L1	L1	L1FLnI	chr14	38442327	38450957	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357094.1	ENSG00000271468	154298	AL355835.1	ENSG00000259072	70989	None	None
L1FLnI_14q21.1k	L1	L1	L1FLnI	chr14	38445209	38453995	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355835.1	ENSG00000259072	73871	AL357094.1	ENSG00000271468	151260	None	None
L1FLnI_14q21.1l	L1	L1	L1FLnI	chr14	38461610	38471914	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357094.1	ENSG00000271468	133341	AL355835.1	ENSG00000259072	90272	None	None
L1FLnI_14q21.1m	L1	L1	L1FLnI	chr14	38596508	38605792	-	noncoding	AL357094.1	processed_pseudogene	ANTISENSE	ENSG00000271468	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1n	L1	L1	L1FLnI	chr14	38631449	38641484	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL357094.1	ENSG00000271468	25351	KRT8P1	ENSG00000258948	85791	None	None
L1FLnI_14q21.1o	L1	L1	L1FLnI	chr14	38918186	38928331	+	coding	LINC00639	lncRNA	ANTISENSE	ENSG00000259070	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1p	L1	L1	L1FLnI	chr14	38974694	38985148	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL132994.1	ENSG00000199285	2133	AL132994.3	ENSG00000270713	609	None	None
L1FLnI_14q21.1q	L1	L1	L1FLnI	chr14	39013673	39023827	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL132994.1	ENSG00000199285	26290	SEC23A	ENSG00000100934	8092	None	None
L1FLnI_14q21.1r	L1	L1	L1FLnI	chr14	39327064	39336134	-	noncoding	MIA2	protein_coding	ANTISENSE	ENSG00000150527	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1s	L1	L1	L1FLnI	chr14	39353078	39363200	-	noncoding	MIA2	protein_coding	ANTISENSE	ENSG00000150527	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1t	L1	L1	L1FLnI	chr14	39461850	39473421	-	coding	AL049828.1	lncRNA	ANTISENSE	ENSG00000258526	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1u	L1	L1	L1FLnI	chr14	39521041	39530958	-	coding	AL049828.1	lncRNA	ANTISENSE	ENSG00000258526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1v	L1	L1	L1FLnI	chr14	39521061	39530958	-	coding	AL049828.1	lncRNA	ANTISENSE	ENSG00000258526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1w	L1	L1	L1FLnI	chr14	39532745	39542488	+	noncoding	AL049828.1	lncRNA	SENSE	ENSG00000258526	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1x	L1	L1	L1FLnI	chr14	39570176	39580655	-	noncoding	AL049828.1	lncRNA	ANTISENSE	ENSG00000258526	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1y	L1	L1	L1FLnI	chr14	39583751	39593791	-	coding	AL049828.1	lncRNA	ANTISENSE	ENSG00000258526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1z	L1	L1	L1FLnI	chr14	39583766	39593791	-	coding	AL049828.1	lncRNA	ANTISENSE	ENSG00000258526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1aa	L1	L1	L1FLnI	chr14	39633043	39643176	-	coding	AL049828.1	lncRNA	ANTISENSE	ENSG00000258526	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1ba	L1	L1	L1FLnI	chr14	39652418	39662530	+	coding	AL049828.1	lncRNA	SENSE	ENSG00000258526	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1ca	L1	L1	L1FLnI	chr14	39697094	39707240	-	coding	AL049828.1	lncRNA	ANTISENSE	ENSG00000258526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1da	L1	L1	L1FLnI	chr14	39776279	39785414	-	coding	AL049828.1	lncRNA	ANTISENSE	ENSG00000258526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1ea	L1	L1	L1FLnI	chr14	39819535	39829663	-	coding	AL049828.1	lncRNA	ANTISENSE	ENSG00000258526	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1fa	L1	L1	L1FLnI	chr14	40274117	40282655	-	noncoding	AL049828.1,AL049828.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000258526,ENSG00000286123	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1ga	L1	L1	L1FLnI	chr14	40322709	40332719	+	coding	AL049828.1,AL049828.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000258526,ENSG00000286123	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1ha	L1	L1	L1FLnI	chr14	40322709	40332735	+	coding	AL049828.1,AL049828.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000258526,ENSG00000286123	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1ia	L1	L1	L1FLnI	chr14	40344560	40354580	+	coding	AL049828.1,AL049828.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000258526,ENSG00000286123	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1ja	L1	L1	L1FLnI	chr14	40344560	40354609	+	coding	AL049828.1,AL049828.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000258526,ENSG00000286123	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1ka	L1	L1	L1FLnI	chr14	40948418	40958434	-	coding	LINC02315	lncRNA	ANTISENSE	ENSG00000251363	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1la	L1	L1	L1FLnI	chr14	41208840	41218858	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL391516.1	ENSG00000258385	77428	LINC02315	ENSG00000251363	59531	None	None
L1FLnI_14q21.1ma	L1	L1	L1FLnI	chr14	41323876	41333997	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356596.1	ENSG00000279972	180975	AL391516.1	ENSG00000258385	25142	None	None
L1FLnI_14q21.1na	L1	L1	L1FLnI	chr14	41751268	41761399	-	coding	LRFN5	protein_coding	ANTISENSE	ENSG00000165379	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1oa	L1	L1	L1FLnI	chr14	41819376	41828908	-	noncoding	LRFN5	protein_coding	ANTISENSE	ENSG00000165379	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr14:41828386-41828739	None
L1FLnI_14q21.1pa	L1	L1	L1FLnI	chr14	41962965	41972441	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445074.1	ENSG00000259149	287290	LRFN5	ENSG00000165379	58416	None	None
L1FLnI_14q21.1qa	L1	L1	L1FLnI	chr14	42105609	42114744	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445074.1	ENSG00000259149	144987	LRFN5	ENSG00000165379	201060	None	None
L1FLnI_14q21.1ra	L1	L1	L1FLnI	chr14	42165529	42174480	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445074.1	ENSG00000259149	85251	LRFN5	ENSG00000165379	260980	None	None
L1FLnI_14q21.1sa	L1	L1	L1FLnI	chr14	42279234	42289277	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL442163.1	ENSG00000258394	73706	AL445074.1	ENSG00000259149	10648	None	None
L1FLnI_14q21.1ta	L1	L1	L1FLnI	chr14	42514257	42523294	+	noncoding	AL442163.1,AL450442.1	lncRNA,lncRNA	SENSE,SENSE	ENSG00000258394,ENSG00000258850	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1ua	L1	L1	L1FLnI	chr14	42568452	42577333	+	noncoding	AL442163.1	lncRNA	SENSE	ENSG00000258394	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.1va	L1	L1	L1FLnI	chr14	42839776	42848548	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL163153.1	ENSG00000259047	140653	AL356800.1	ENSG00000258934	31664	None	None
L1FLnI_14q21.1wa	L1	L1	L1FLnI	chr14	42967013	42977055	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL163153.1	ENSG00000259047	12146	AL356800.1	ENSG00000258934	158901	None	None
L1FLnI_14q21.2a	L1	L1	L1FLnI	chr14	43058836	43068863	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL163153.1	ENSG00000259047	69353	AL445383.1	ENSG00000258406	205961	None	None
L1FLnI_14q21.2b	L1	L1	L1FLnI	chr14	43258564	43268579	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL163153.1	ENSG00000259047	269081	AL445383.1	ENSG00000258406	6245	None	None
L1FLnI_14q21.2c	L1	L1	L1FLnI	chr14	43366771	43376795	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL583809.1	ENSG00000286464	51968	KRT8P2	ENSG00000258828	164088	None	None
L1FLnI_14q21.2d	L1	L1	L1FLnI	chr14	43450262	43460395	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL583809.1	ENSG00000286464	135459	KRT8P2	ENSG00000258828	80488	None	None
L1FLnI_14q21.2e	L1	L1	L1FLnI	chr14	43488687	43498701	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL583809.1	ENSG00000286464	173884	KRT8P2	ENSG00000258828	42182	None	None
L1FLnI_14q21.2f	L1	L1	L1FLnI	chr14	43511060	43520720	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL583809.1	ENSG00000286464	196257	KRT8P2	ENSG00000258828	20163	chr14:43520333-43520343	None
L1FLnI_14q21.2g	L1	L1	L1FLnI	chr14	43635284	43646646	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARHGAP16P	ENSG00000258894	38601	LINC02307	ENSG00000258969	343893	None	None
L1FLnI_14q21.2h	L1	L1	L1FLnI	chr14	43648715	43657438	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARHGAP16P	ENSG00000258894	52032	LINC02307	ENSG00000258969	333101	chr14:43650852-43650871	None
L1FLnI_14q21.2i	L1	L1	L1FLnI	chr14	43695155	43705168	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ARHGAP16P	ENSG00000258894	98472	LINC02307	ENSG00000258969	285371	None	None
L1FLnI_14q21.2j	L1	L1	L1FLnI	chr14	43801557	43810430	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARHGAP16P	ENSG00000258894	204874	LINC02307	ENSG00000258969	180109	None	None
L1FLnI_14q21.2k	L1	L1	L1FLnI	chr14	43910243	43919530	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARHGAP16P	ENSG00000258894	313560	LINC02307	ENSG00000258969	71009	None	None
L1FLnI_14q21.2l	L1	L1	L1FLnI	chr14	44470699	44480190	-	coding	LINC02277	lncRNA	SENSE	ENSG00000258487	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.2m	L1	L1	L1FLnI	chr14	44510974	44519797	-	noncoding	AL356022.1	lncRNA	ANTISENSE	ENSG00000258747	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.2n	L1	L1	L1FLnI	chr14	44515971	44525298	-	noncoding	AL356022.1	lncRNA	ANTISENSE	ENSG00000258747	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.2o	L1	L1	L1FLnI	chr14	44551052	44561302	-	coding	AL356022.1	lncRNA	ANTISENSE	ENSG00000258747	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.2p	L1	L1	L1FLnI	chr14	44563639	44573212	+	noncoding	AL356022.1	lncRNA	SENSE	ENSG00000258747	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.2q	L1	L1	L1FLnI	chr14	44704582	44714604	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02302	ENSG00000258998	48549	AL356022.1	ENSG00000258747	137115	None	None
L1FLnI_14q21.2r	L1	L1	L1FLnI	chr14	44850904	44860072	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02302	ENSG00000258998	68075	DOCK11P1	ENSG00000259000	244	None	None
L1FLnI_14q21.2s	L1	L1	L1FLnI	chr14	45319744	45329875	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL162632.3	ENSG00000260046	39340	DNAJC19P9	ENSG00000258608	29358	None	None
L1FLnI_14q21.2t	L1	L1	L1FLnI	chr14	45407910	45417403	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL162632.1	ENSG00000257900	18624	AL162632.2	ENSG00000258746	85339	None	None
L1FLnI_14q21.2u	L1	L1	L1FLnI	chr14	45447877	45457179	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL162632.2	ENSG00000258746	45563	AL162632.1	ENSG00000257900	58591	None	None
L1FLnI_14q21.2v	L1	L1	L1FLnI	chr14	45476639	45486669	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL162632.2	ENSG00000258746	16073	AL162632.1	ENSG00000257900	87353	None	None
L1FLnI_14q21.2w	L1	L1	L1FLnI	chr14	45545218	45555385	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL139354.1	ENSG00000258845	12610	AL162632.2	ENSG00000258746	42078	None	None
L1FLnI_14q21.2x	L1	L1	L1FLnI	chr14	45882729	45892758	-	coding	LINC00871	lncRNA	ANTISENSE	ENSG00000258700	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr14:45891128-45891135
L1FLnI_14q21.2y	L1	L1	L1FLnI	chr14	46094922	46105048	-	coding	LINC00871	lncRNA	ANTISENSE	ENSG00000258700	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.2z	L1	L1	L1FLnI	chr14	46160642	46170782	-	coding	LINC00871	lncRNA	ANTISENSE	ENSG00000258700	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.2aa	L1	L1	L1FLnI	chr14	46371101	46381034	-	noncoding	LINC00871	lncRNA	ANTISENSE	ENSG00000258700	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.2ba	L1	L1	L1FLnI	chr14	46372062	46381034	-	noncoding	LINC00871	lncRNA	ANTISENSE	ENSG00000258700	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.2ca	L1	L1	L1FLnI	chr14	46505065	46515241	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00871	ENSG00000258700	3162	RPL10L	ENSG00000165496	135769	None	None
L1FLnI_14q21.3a	L1	L1	L1FLnI	chr14	47168156	47178309	+	coding	MDGA2	protein_coding	ANTISENSE	ENSG00000139915	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr14:47168282-47168595	None
L1FLnI_14q21.3b	L1	L1	L1FLnI	chr14	47373749	47383856	+	noncoding	MDGA2	protein_coding	ANTISENSE	ENSG00000139915	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.3c	L1	L1	L1FLnI	chr14	47791467	47801147	+	coding	LINC00648	lncRNA	ANTISENSE	ENSG00000259129	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.3d	L1	L1	L1FLnI	chr14	47811131	47821888	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359212.1	ENSG00000258639	223593	AL121576.1	ENSG00000259117	8930	None	None
L1FLnI_14q21.3e	L1	L1	L1FLnI	chr14	47811525	47821888	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359212.1	ENSG00000258639	223593	AL121576.1	ENSG00000259117	9324	None	None
L1FLnI_14q21.3f	L1	L1	L1FLnI	chr14	47897682	47907704	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL121576.1	ENSG00000259117	95481	AL359212.1	ENSG00000258639	137777	None	None
L1FLnI_14q21.3g	L1	L1	L1FLnI	chr14	47967641	47976663	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359212.1	ENSG00000258639	68818	AL121576.1	ENSG00000259117	165440	None	None
L1FLnI_14q21.3h	L1	L1	L1FLnI	chr14	48030163	48039956	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359212.1	ENSG00000258639	5525	AL121576.1	ENSG00000259117	227962	None	None
L1FLnI_14q21.3i	L1	L1	L1FLnI	chr14	48183584	48193613	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL359212.1	ENSG00000258639	137368	AL512358.1	ENSG00000286595	561	None	None
L1FLnI_14q21.3j	L1	L1	L1FLnI	chr14	48279401	48289353	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL358335.3	ENSG00000270359	29715	AL512358.2	ENSG00000287492	13792	None	None
L1FLnI_14q21.3k	L1	L1	L1FLnI	chr14	48365765	48375904	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL358335.2	ENSG00000258751	18911	RNU6-297P	ENSG00000207366	24433	None	None
L1FLnI_14q21.3l	L1	L1	L1FLnI	chr14	48478004	48487004	+	coding	AL358335.2	lncRNA	ANTISENSE	ENSG00000258751	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.3m	L1	L1	L1FLnI	chr14	48569732	48579885	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL512360.1	ENSG00000258381	239475	AL358335.2	ENSG00000258751	77965	None	None
L1FLnI_14q21.3n	L1	L1	L1FLnI	chr14	48603244	48613348	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358335.2	ENSG00000258751	111477	AL512360.1	ENSG00000258381	206012	None	None
L1FLnI_14q21.3o	L1	L1	L1FLnI	chr14	48633444	48642336	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358335.2	ENSG00000258751	141677	AL512360.1	ENSG00000258381	177024	None	None
L1FLnI_14q21.3p	L1	L1	L1FLnI	chr14	48633444	48641946	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358335.2	ENSG00000258751	141677	AL512360.1	ENSG00000258381	177414	None	None
L1FLnI_14q21.3q	L1	L1	L1FLnI	chr14	48667144	48677420	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358335.2	ENSG00000258751	175377	AL512360.1	ENSG00000258381	141940	None	None
L1FLnI_14q21.3r	L1	L1	L1FLnI	chr14	48693693	48703049	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL358335.2	ENSG00000258751	201926	AL512360.1	ENSG00000258381	116311	None	None
L1FLnI_14q21.3s	L1	L1	L1FLnI	chr14	48788666	48797529	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL358335.2	ENSG00000258751	296899	AL512360.1	ENSG00000258381	21831	None	chr14:48788922-48788944
L1FLnI_14q21.3t	L1	L1	L1FLnI	chr14	49059009	49068430	+	noncoding	AL110505.1	lncRNA	ANTISENSE	ENSG00000258868	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.3u	L1	L1	L1FLnI	chr14	49066158	49075188	+	noncoding	AL110505.1	lncRNA	ANTISENSE	ENSG00000258868	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q21.3v	L1	L1	L1FLnI	chr14	49093216	49103232	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL110505.1	ENSG00000258868	15711	AL512361.1	ENSG00000258401	270734	None	None
L1FLnI_14q21.3w	L1	L1	L1FLnI	chr14	49125372	49135753	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL512361.1	ENSG00000258401	238213	AL110505.1	ENSG00000258868	47867	None	None
L1FLnI_14q21.3x	L1	L1	L1FLnI	chr14	49143459	49153641	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL512361.1	ENSG00000258401	220325	AL110505.1	ENSG00000258868	65954	None	None
L1FLnI_14q21.3y	L1	L1	L1FLnI	chr14	49348087	49357771	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512361.1	ENSG00000258401	16195	AL110505.1	ENSG00000258868	270582	None	None
L1FLnI_14q21.3z	L1	L1	L1FLnI	chr14	49353096	49363241	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL110505.1	ENSG00000258868	275591	AL512361.1	ENSG00000258401	10725	None	None
L1FLnI_14q21.3aa	L1	L1	L1FLnI	chr14	50071442	50080505	+	coding	LINC01588	lncRNA	ANTISENSE	ENSG00000214900	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q22.1a	L1	L1	L1FLnI	chr14	51412675	51422810	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SETP2	ENSG00000258893	13228	LINC02310	ENSG00000258808	15540	None	None
L1FLnI_14q22.1b	L1	L1	L1FLnI	chr14	51794103	51804132	-	coding	AL079307.1	lncRNA	ANTISENSE	ENSG00000258535	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q22.1c	L1	L1	L1FLnI	chr14	52154275	52164337	+	coding	AL118557.1	processed_pseudogene	SENSE	ENSG00000258440	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q22.1d	L1	L1	L1FLnI	chr14	52154275	52164365	+	coding	AL118557.1	processed_pseudogene	SENSE	ENSG00000258440	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q22.1e	L1	L1	L1FLnI	chr14	52204676	52214792	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL118557.1	ENSG00000258440	48497	PTGDR	ENSG00000168229	52906	None	None
L1FLnI_14q22.1f	L1	L1	L1FLnI	chr14	52372715	52382146	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TXNDC16	ENSG00000087301	48450	PTGER2	ENSG00000125384	44117	None	None
L1FLnI_14q22.1g	L1	L1	L1FLnI	chr14	52380996	52390809	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PTGER2	ENSG00000125384	52398	TXNDC16	ENSG00000087301	39787	None	None
L1FLnI_14q22.1h	L1	L1	L1FLnI	chr14	52442488	52451032	+	noncoding	TXNDC16	protein_coding	ANTISENSE	ENSG00000087301	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr14:52450447-52450457	None
L1FLnI_14q22.1i	L1	L1	L1FLnI	chr14	52590336	52600457	-	noncoding	GPR137C	protein_coding	ANTISENSE	ENSG00000180998	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q22.1j	L1	L1	L1FLnI	chr14	53081153	53091383	+	coding	DDHD1	protein_coding	ANTISENSE	ENSG00000100523	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr14:53086969-53086972
L1FLnI_14q22.1k	L1	L1	L1FLnI	chr14	53265908	53275079	-	coding	AL365295.1	lncRNA	ANTISENSE	ENSG00000237356	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q22.1l	L1	L1	L1FLnI	chr14	53297887	53306991	-	coding	AL365295.1	lncRNA	ANTISENSE	ENSG00000237356	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr14:53304227-53304416	None
L1FLnI_14q22.1m	L1	L1	L1FLnI	chr14	53297901	53306991	-	coding	AL365295.1	lncRNA	ANTISENSE	ENSG00000237356	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr14:53304227-53304416	None
L1FLnI_14q22.1n	L1	L1	L1FLnI	chr14	53314542	53324715	+	coding	AL365295.1	lncRNA	SENSE	ENSG00000237356	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q22.1o	L1	L1	L1FLnI	chr14	53420305	53430413	+	coding	AL365295.1	lncRNA	SENSE	ENSG00000237356	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q22.1p	L1	L1	L1FLnI	chr14	53465988	53474612	-	noncoding	AL365295.1	lncRNA	ANTISENSE	ENSG00000237356	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q22.2a	L1	L1	L1FLnI	chr14	53794408	53804827	+	noncoding	AL365295.1,LINC02331	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000237356,ENSG00000235269	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q22.2b	L1	L1	L1FLnI	chr14	54027192	54037329	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CDKN3	ENSG00000100526	359520	ATP5F1CP1	ENSG00000224004	35197	None	None
L1FLnI_14q22.2c	L1	L1	L1FLnI	chr14	54027200	54037329	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CDKN3	ENSG00000100526	359520	ATP5F1CP1	ENSG00000224004	35205	None	None
L1FLnI_14q22.2d	L1	L1	L1FLnI	chr14	54143781	54152390	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATP5F1CP1	ENSG00000224004	151786	CDKN3	ENSG00000100526	244459	None	None
L1FLnI_14q22.2e	L1	L1	L1FLnI	chr14	54230379	54240526	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ATP5F1CP1	ENSG00000224004	238384	CDKN3	ENSG00000100526	156323	None	None
L1FLnI_14q22.2f	L1	L1	L1FLnI	chr14	54866866	54877005	+	coding	GCH1	protein_coding	ANTISENSE	ENSG00000131979	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr14:54867586-54867589,chr14:54870332-54870336
L1FLnI_14q22.2g	L1	L1	L1FLnI	chr14	54944577	54954622	+	coding	WDHD1	protein_coding	ANTISENSE	ENSG00000198554	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q22.3a	L1	L1	L1FLnI	chr14	55987684	55996744	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL138995.1	ENSG00000277763	120572	AL163952.1	ENSG00000259868	24714	None	None
L1FLnI_14q22.3b	L1	L1	L1FLnI	chr14	55993555	56003314	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL138995.1	ENSG00000277763	114002	AL163952.1	ENSG00000259868	30585	None	None
L1FLnI_14q22.3c	L1	L1	L1FLnI	chr14	56013512	56023542	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL138995.1	ENSG00000277763	93774	AL163952.1	ENSG00000259868	50542	None	None
L1FLnI_14q22.3d	L1	L1	L1FLnI	chr14	56161489	56170275	-	coding	PELI2	protein_coding	ANTISENSE	ENSG00000139946	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q22.3e	L1	L1	L1FLnI	chr14	56225135	56235247	+	coding	PELI2	protein_coding	SENSE	ENSG00000139946	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr14:56225250-56225300
L1FLnI_14q22.3f	L1	L1	L1FLnI	chr14	56359101	56368331	-	noncoding	LINC02284	lncRNA	ANTISENSE	ENSG00000259719	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q22.3g	L1	L1	L1FLnI	chr14	56436598	56445327	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM260	ENSG00000070269	43027	LINC02284	ENSG00000259719	9566	None	None
L1FLnI_14q22.3h	L1	L1	L1FLnI	chr14	56441320	56451331	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM260	ENSG00000070269	37023	LINC02284	ENSG00000259719	14288	None	None
L1FLnI_14q22.3i	L1	L1	L1FLnI	chr14	56451002	56461044	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02284	ENSG00000259719	23970	TMEM260	ENSG00000070269	27310	None	None
L1FLnI_14q22.3j	L1	L1	L1FLnI	chr14	56636013	56646157	+	coding	TMEM260,AL161757.2	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000070269,ENSG00000258428	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q22.3k	L1	L1	L1FLnI	chr14	56664029	56674061	+	coding	AL161757.5	lncRNA	ANTISENSE	ENSG00000259133	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q22.3l	L1	L1	L1FLnI	chr14	57099981	57110131	-	coding	OTX2-AS1,AL391152.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000248550,ENSG00000258592	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q22.3m	L1	L1	L1FLnI	chr14	57108712	57118714	+	coding	OTX2-AS1,AL391152.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000248550,ENSG00000258592	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q22.3n	L1	L1	L1FLnI	chr14	57337584	57347617	-	coding	AL355834.2	lncRNA	SENSE	ENSG00000286355	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q22.3o	L1	L1	L1FLnI	chr14	57512992	57523196	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC35F4	ENSG00000151812	40724	CCDC198	ENSG00000100557	19125	None	None
L1FLnI_14q22.3p	L1	L1	L1FLnI	chr14	57521389	57531743	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC35F4	ENSG00000151812	32177	CCDC198	ENSG00000100557	27522	None	None
L1FLnI_14q23.1a	L1	L1	L1FLnI	chr14	57674497	57683149	+	coding	SLC35F4	protein_coding	ANTISENSE	ENSG00000151812	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.1b	L1	L1	L1FLnI	chr14	57737303	57746744	+	coding	SLC35F4	protein_coding	ANTISENSE	ENSG00000151812	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.1c	L1	L1	L1FLnI	chr14	57781925	57792623	+	noncoding	SLC35F4	protein_coding	ANTISENSE	ENSG00000151812	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.1d	L1	L1	L1FLnI	chr14	57795519	57804076	+	noncoding	SLC35F4	protein_coding	ANTISENSE	ENSG00000151812	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr14:57798119-57798122
L1FLnI_14q23.1e	L1	L1	L1FLnI	chr14	57908618	57917573	-	noncoding	SLC35F4	protein_coding	SENSE	ENSG00000151812	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.1f	L1	L1	L1FLnI	chr14	57947503	57957944	+	coding	SLC35F4	protein_coding	ANTISENSE	ENSG00000151812	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr14:57949132-57949135
L1FLnI_14q23.1g	L1	L1	L1FLnI	chr14	58029041	58039039	+	coding	ARMH4	protein_coding	ANTISENSE	ENSG00000139971	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.1h	L1	L1	L1FLnI	chr14	58521767	58531528	+	coding	KIAA0586,HNRNPCP1	protein_coding,processed_pseudogene	SENSE,SENSE	ENSG00000100578,ENSG00000258900	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.1i	L1	L1	L1FLnI	chr14	58854283	58864795	-	coding	LINC01500	lncRNA	ANTISENSE	ENSG00000258583	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.1j	L1	L1	L1FLnI	chr14	58920099	58929538	+	noncoding	LINC01500	lncRNA	SENSE	ENSG00000258583	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.1k	L1	L1	L1FLnI	chr14	59400339	59409229	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	GPR135	ENSG00000181619	19793	DAAM1	ENSG00000100592	28934	chr14:59407326-59407566	None
L1FLnI_14q23.1l	L1	L1	L1FLnI	chr14	59405952	59416109	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	DAAM1	ENSG00000100592	34547	GPR135	ENSG00000181619	12913	chr14:59407326-59407566	None
L1FLnI_14q23.1m	L1	L1	L1FLnI	chr14	59509682	59519828	+	coding	AL121694.1,CCDC175	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000258782,ENSG00000151838	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.1n	L1	L1	L1FLnI	chr14	59547992	59558128	+	noncoding	CCDC175	protein_coding	ANTISENSE	ENSG00000151838	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.1o	L1	L1	L1FLnI	chr14	59653946	59662660	+	coding	RTN1	protein_coding	ANTISENSE	ENSG00000139970	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.1p	L1	L1	L1FLnI	chr14	59729894	59739670	+	noncoding	RTN1	protein_coding	ANTISENSE	ENSG00000139970	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.1q	L1	L1	L1FLnI	chr14	59875780	59885295	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133299.1	ENSG00000261120	34128	RTN1	ENSG00000139970	5004	None	None
L1FLnI_14q23.1r	L1	L1	L1FLnI	chr14	59946006	59956023	-	coding	LRRC9	protein_coding	ANTISENSE	ENSG00000131951	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.1s	L1	L1	L1FLnI	chr14	59952152	59962573	-	noncoding	LRRC9	protein_coding	ANTISENSE	ENSG00000131951	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.1t	L1	L1	L1FLnI	chr14	60036272	60046377	-	noncoding	LRRC9,AL157911.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000131951,ENSG00000258553	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.1u	L1	L1	L1FLnI	chr14	60378131	60388284	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02322	ENSG00000258556	54224	C14orf39	ENSG00000179008	8185	None	None
L1FLnI_14q23.1v	L1	L1	L1FLnI	chr14	60378131	60388304	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02322	ENSG00000258556	54224	C14orf39	ENSG00000179008	8165	None	None
L1FLnI_14q23.1w	L1	L1	L1FLnI	chr14	60439554	60449696	+	coding	C14orf39	protein_coding	ANTISENSE	ENSG00000179008	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.1x	L1	L1	L1FLnI	chr14	60522761	60532924	-	coding	AL049874.3	lncRNA	ANTISENSE	ENSG00000258670	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.1y	L1	L1	L1FLnI	chr14	60830710	60841176	-	noncoding	MNAT1	protein_coding	ANTISENSE	ENSG00000020426	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.1z	L1	L1	L1FLnI	chr14	60907826	60917969	-	coding	MNAT1,AL160236.2	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000020426,ENSG00000258892	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.1aa	L1	L1	L1FLnI	chr14	61008890	61018970	-	coding	SLC38A6	protein_coding	ANTISENSE	ENSG00000139974	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.1ba	L1	L1	L1FLnI	chr14	61054620	61064648	-	coding	SLC38A6	protein_coding	ANTISENSE	ENSG00000139974	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.1ca	L1	L1	L1FLnI	chr14	61091773	61101894	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRKCH	ENSG00000027075	85665	SLC38A6	ENSG00000139974	8040	None	None
L1FLnI_14q23.2a	L1	L1	L1FLnI	chr14	61844848	61853404	-	noncoding	SYT16	protein_coding	ANTISENSE	ENSG00000139973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.2b	L1	L1	L1FLnI	chr14	61954607	61963338	-	noncoding	SYT16	protein_coding	ANTISENSE	ENSG00000139973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.2c	L1	L1	L1FLnI	chr14	62044956	62055119	-	coding	SYT16	protein_coding	ANTISENSE	ENSG00000139973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.2d	L1	L1	L1FLnI	chr14	62198603	62208752	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL389895.1	ENSG00000258638	306120	AL390816.3	ENSG00000270852	46345	chr14:62205781-62205962	None
L1FLnI_14q23.2e	L1	L1	L1FLnI	chr14	62217783	62227968	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL389895.1	ENSG00000258638	286904	AL390816.3	ENSG00000270852	65525	None	None
L1FLnI_14q23.2f	L1	L1	L1FLnI	chr14	62532353	62542354	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL389895.1	ENSG00000258638	17230	ATP5F1AP4	ENSG00000258877	61759	None	None
L1FLnI_14q23.2g	L1	L1	L1FLnI	chr14	62532353	62542382	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL389895.1	ENSG00000258638	17230	ATP5F1AP4	ENSG00000258877	61731	None	None
L1FLnI_14q23.2h	L1	L1	L1FLnI	chr14	62570424	62579856	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL389895.1	ENSG00000258638	55301	ATP5F1AP4	ENSG00000258877	24257	None	None
L1FLnI_14q23.2i	L1	L1	L1FLnI	chr14	62633060	62643211	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ATP5F1AP4	ENSG00000258877	27343	KCNH5	ENSG00000140015	56253	None	None
L1FLI_14q23.2	L1	L1	L1FLI	chr14	63115694	63123738	-	coding	AL137191.1,PARP1P2	lncRNA,processed_pseudogene	SENSE,ANTISENSE	ENSG00000259093,ENSG00000258995	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.2j	L1	L1	L1FLnI	chr14	63138514	63148617	-	noncoding	AL137191.1	lncRNA	SENSE	ENSG00000259093	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.2k	L1	L1	L1FLnI	chr14	63163344	63171843	+	coding	AL137191.1	lncRNA	ANTISENSE	ENSG00000259093	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.2l	L1	L1	L1FLnI	chr14	63299861	63308530	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049871.1	ENSG00000258943	314	GPHB5	ENSG00000179600	4305	None	None
L1FLnI_14q23.3a	L1	L1	L1FLnI	chr14	65522087	65532187	-	coding	FUT8,EIF1AXP2	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000033170,ENSG00000258980	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.3b	L1	L1	L1FLnI	chr14	65854369	65863786	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL391261.1	ENSG00000258629	15806	FUT8	ENSG00000033170	110248	None	None
L1FLnI_14q23.3c	L1	L1	L1FLnI	chr14	66025947	66036115	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02290	ENSG00000258502	75442	YBX1P1	ENSG00000224861	12158	None	None
L1FLnI_14q23.3d	L1	L1	L1FLnI	chr14	66183238	66193367	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359232.1	ENSG00000258561	19443	AL157997.1	ENSG00000200860	5603	None	None
L1FLnI_14q23.3e	L1	L1	L1FLnI	chr14	66197574	66207112	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL157997.1	ENSG00000200860	19939	AL359232.1	ENSG00000258561	5698	None	None
L1FLnI_14q23.3f	L1	L1	L1FLnI	chr14	66329842	66339440	+	noncoding	AL359232.1	lncRNA	ANTISENSE	ENSG00000258561	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.3g	L1	L1	L1FLnI	chr14	66524007	66534421	-	noncoding	GPHN	protein_coding	ANTISENSE	ENSG00000171723	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.3h	L1	L1	L1FLnI	chr14	66584263	66593813	+	noncoding	GPHN	protein_coding	SENSE	ENSG00000171723	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.3i	L1	L1	L1FLnI	chr14	66657140	66665791	+	coding	GPHN	protein_coding	SENSE	ENSG00000171723	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.3j	L1	L1	L1FLnI	chr14	66697867	66708289	+	coding	GPHN	protein_coding	SENSE	ENSG00000171723	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.3k	L1	L1	L1FLnI	chr14	66699125	66708289	+	noncoding	GPHN	protein_coding	SENSE	ENSG00000171723	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.3l	L1	L1	L1FLnI	chr14	66795196	66807022	-	noncoding	GPHN	protein_coding	ANTISENSE	ENSG00000171723	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.3m	L1	L1	L1FLnI	chr14	66854083	66864990	+	noncoding	GPHN	protein_coding	SENSE	ENSG00000171723	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.3n	L1	L1	L1FLnI	chr14	66869486	66879866	+	noncoding	GPHN	protein_coding	SENSE	ENSG00000171723	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.3o	L1	L1	L1FLnI	chr14	67062175	67071592	-	coding	GPHN	protein_coding	ANTISENSE	ENSG00000171723	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.3p	L1	L1	L1FLnI	chr14	67102690	67111475	-	noncoding	GPHN	protein_coding	ANTISENSE	ENSG00000171723	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q23.3q	L1	L1	L1FLnI	chr14	67173580	67182099	-	coding	GPHN	protein_coding	ANTISENSE	ENSG00000171723	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q24.1a	L1	L1	L1FLnI	chr14	67864573	67874597	+	coding	RAD51B	protein_coding	SENSE	ENSG00000182185	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr14:67864999-67865003
L1FLnI_14q24.1b	L1	L1	L1FLnI	chr14	68023128	68032797	-	noncoding	RAD51B	protein_coding	ANTISENSE	ENSG00000182185	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr14:68025498-68025501
L1FLnI_14q24.1c	L1	L1	L1FLnI	chr14	68428267	68438391	-	coding	RAD51B	protein_coding	ANTISENSE	ENSG00000182185	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q24.1d	L1	L1	L1FLnI	chr14	68428268	68438391	-	coding	RAD51B	protein_coding	ANTISENSE	ENSG00000182185	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q24.1e	L1	L1	L1FLnI	chr14	69415432	69425643	-	noncoding	SLC39A9	protein_coding	ANTISENSE	ENSG00000029364	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q24.2a	L1	L1	L1FLnI	chr14	70497816	70507941	+	noncoding	AL357153.2	lncRNA	ANTISENSE	ENSG00000257759	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_14q24.2	L1	L1	L1FLI	chr14	70546289	70554336	+	coding	AL357153.2	lncRNA	ANTISENSE	ENSG00000257759	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q24.2b	L1	L1	L1FLnI	chr14	70935632	70945758	-	noncoding	PCNX1,AC004825.3	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000100731,ENSG00000287643	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q24.2c	L1	L1	L1FLnI	chr14	71078352	71088806	-	noncoding	PCNX1,PTTG4P	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000100731,ENSG00000258571	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q24.2d	L1	L1	L1FLnI	chr14	71842442	71852496	-	coding	AC005993.1	lncRNA	ANTISENSE	ENSG00000266869	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q24.2e	L1	L1	L1FLnI	chr14	71842466	71852496	-	coding	AC005993.1	lncRNA	ANTISENSE	ENSG00000266869	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q24.2f	L1	L1	L1FLnI	chr14	71852728	71862639	+	coding	AC005993.1	lncRNA	SENSE	ENSG00000266869	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q24.2g	L1	L1	L1FLnI	chr14	71852728	71862229	+	coding	AC005993.1	lncRNA	SENSE	ENSG00000266869	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q24.2h	L1	L1	L1FLnI	chr14	71872147	71882324	-	coding	AC005993.1	lncRNA	ANTISENSE	ENSG00000266869	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q24.2i	L1	L1	L1FLnI	chr14	71975764	71985813	-	coding	RGS6	protein_coding	ANTISENSE	ENSG00000182732	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q24.2j	L1	L1	L1FLnI	chr14	72409068	72419187	-	noncoding	RGS6	protein_coding	ANTISENSE	ENSG00000182732	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q24.3a	L1	L1	L1FLnI	chr14	75794929	75804864	-	noncoding	TTLL5	protein_coding	ANTISENSE	ENSG00000119685	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q24.3b	L1	L1	L1FLnI	chr14	76740789	76750066	+	noncoding	AC007376.2	lncRNA	ANTISENSE	ENSG00000258569	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr14:76743051-76743422	None
L1FLnI_14q24.3c	L1	L1	L1FLnI	chr14	76740789	76750083	+	noncoding	AC007376.2	lncRNA	ANTISENSE	ENSG00000258569	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr14:76743051-76743422	None
L1FLnI_14q24.3d	L1	L1	L1FLnI	chr14	78536110	78546324	-	noncoding	NRXN3	protein_coding	ANTISENSE	ENSG00000021645	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q31.1a	L1	L1	L1FLnI	chr14	79125680	79135702	-	coding	NRXN3	protein_coding	ANTISENSE	ENSG00000021645	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q31.1b	L1	L1	L1FLnI	chr14	79308435	79317561	-	coding	NRXN3	protein_coding	ANTISENSE	ENSG00000021645	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr14:79314051-79314057
L1FLnI_14q31.1c	L1	L1	L1FLnI	chr14	79764260	79774291	+	coding	NRXN3,AC008056.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000021645,ENSG00000258637	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q31.1d	L1	L1	L1FLnI	chr14	79950464	79960189	+	noncoding	AF123462.1	lncRNA	ANTISENSE	ENSG00000258416	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q31.1e	L1	L1	L1FLnI	chr14	80024918	80034209	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AF123462.1	ENSG00000258416	50749	DIO2	ENSG00000211448	163318	None	None
L1FLnI_14q31.1f	L1	L1	L1FLnI	chr14	80035304	80045488	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF123462.1	ENSG00000258416	61135	DIO2	ENSG00000211448	152039	None	None
L1FLnI_14q31.1g	L1	L1	L1FLnI	chr14	80085029	80095182	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AF123462.1	ENSG00000258416	110860	DIO2	ENSG00000211448	102345	None	None
L1FLnI_14q31.1h	L1	L1	L1FLnI	chr14	80245187	80254547	-	coding	DIO2,DIO2-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000211448,ENSG00000258766	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q31.1i	L1	L1	L1FLnI	chr14	80880863	80891311	+	noncoding	CEP128	protein_coding	ANTISENSE	ENSG00000100629	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q31.1j	L1	L1	L1FLnI	chr14	81110667	81120690	+	coding	TSHR,AC007262.2	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000165409,ENSG00000284959	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr14:81114123-81114126
L1FLnI_14q31.1k	L1	L1	L1FLnI	chr14	81537277	81547285	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SEL1L	ENSG00000071537	3424	LINC01467	ENSG00000258977	58053	None	None
L1FLnI_14q31.1l	L1	L1	L1FLnI	chr14	81856657	81865417	+	coding	AL355838.1	lncRNA	SENSE	ENSG00000259035	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q31.1m	L1	L1	L1FLnI	chr14	82317420	82325955	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL357095.1	ENSG00000276782	103917	AL355838.1	ENSG00000259035	287071	None	None
L1FLnI_14q31.1n	L1	L1	L1FLnI	chr14	82344051	82354068	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL355838.1	ENSG00000259035	313702	AL357095.1	ENSG00000276782	75804	None	None
L1FLnI_14q31.1o	L1	L1	L1FLnI	chr14	82367581	82376694	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355838.1	ENSG00000259035	337232	AL357095.1	ENSG00000276782	53178	None	None
L1FLnI_14q31.2a	L1	L1	L1FLnI	chr14	83212134	83221737	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6ATAC28P	ENSG00000238561	528647	RNU7-51P	ENSG00000252369	163494	chr14:83220291-83220478	None
L1FLnI_14q31.2b	L1	L1	L1FLnI	chr14	83601727	83611827	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6ATAC28P	ENSG00000238561	138557	RNU7-51P	ENSG00000252369	553087	None	None
L1FLnI_14q31.2c	L1	L1	L1FLnI	chr14	83601743	83611827	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6ATAC28P	ENSG00000238561	138557	RNU7-51P	ENSG00000252369	553103	None	None
L1FLnI_14q31.2d	L1	L1	L1FLnI	chr14	83635800	83645830	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU7-51P	ENSG00000252369	587160	RNU6ATAC28P	ENSG00000238561	104554	None	None
L1FLnI_14q31.2e	L1	L1	L1FLnI	chr14	83946191	83956109	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL356807.1	ENSG00000285826	30667	LINC02305	ENSG00000258532	30814	None	None
L1FLnI_14q31.3a	L1	L1	L1FLnI	chr14	84412941	84422002	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-976P	ENSG00000251895	317940	MTCYBP27	ENSG00000259012	235853	None	None
L1FLnI_14q31.3b	L1	L1	L1FLnI	chr14	84513504	84524978	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-976P	ENSG00000251895	214964	MTCYBP27	ENSG00000259012	336416	None	None
L1FLnI_14q31.3c	L1	L1	L1FLnI	chr14	84649139	84659539	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-976P	ENSG00000251895	80403	MTCYBP27	ENSG00000259012	472051	None	chr14:84653352-84653355
L1FLnI_14q31.3d	L1	L1	L1FLnI	chr14	84659683	84669887	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-976P	ENSG00000251895	70055	MTCYBP27	ENSG00000259012	482595	None	None
L1FLnI_14q31.3e	L1	L1	L1FLnI	chr14	84660072	84669887	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-976P	ENSG00000251895	70055	MTCYBP27	ENSG00000259012	482984	None	None
L1FLnI_14q31.3f	L1	L1	L1FLnI	chr14	85017909	85027979	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL357172.1	ENSG00000259044	174870	AL163642.2	ENSG00000271712	18613	None	None
L1FLnI_14q31.3g	L1	L1	L1FLnI	chr14	85366454	85375604	-	coding	AL049775.2	lncRNA	SENSE	ENSG00000258902	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q31.3h	L1	L1	L1FLnI	chr14	85803162	85812561	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02328	ENSG00000258733	98877	FLRT2	ENSG00000185070	148734	None	None
L1FLnI_14q31.3i	L1	L1	L1FLnI	chr14	85882097	85892116	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FLRT2	ENSG00000185070	227669	LINC02328	ENSG00000258733	19322	None	None
L1FLnI_14q31.3j	L1	L1	L1FLnI	chr14	85882097	85892145	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FLRT2	ENSG00000185070	227669	LINC02328	ENSG00000258733	19293	None	None
L1FLnI_14q31.3k	L1	L1	L1FLnI	chr14	85901424	85911934	-	coding	LINC02328	lncRNA	ANTISENSE	ENSG00000258733	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q31.3l	L1	L1	L1FLnI	chr14	85968537	85978696	-	coding	LINC02328	lncRNA	ANTISENSE	ENSG00000258733	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q31.3m	L1	L1	L1FLnI	chr14	86041854	86052266	-	noncoding	LINC02328,LINC02316	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000258733,ENSG00000258912	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q31.3n	L1	L1	L1FLnI	chr14	86073991	86084017	-	coding	LINC02328	lncRNA	ANTISENSE	ENSG00000258733	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q31.3o	L1	L1	L1FLnI	chr14	86095436	86105541	-	coding	LINC02328	lncRNA	ANTISENSE	ENSG00000258733	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q31.3p	L1	L1	L1FLnI	chr14	86104961	86114994	-	coding	LINC02328	lncRNA	ANTISENSE	ENSG00000258733	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q31.3q	L1	L1	L1FLnI	chr14	86308734	86318877	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL161753.1	ENSG00000286582	3871	LINC02309	ENSG00000258994	13499	None	None
L1FLnI_14q31.3r	L1	L1	L1FLnI	chr14	86587797	86596404	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02309	ENSG00000258994	186512	LINC01148	ENSG00000258804	309374	None	None
L1FLnI_14q31.3s	L1	L1	L1FLnI	chr14	86744544	86754640	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01148	ENSG00000258804	151138	LINC02309	ENSG00000258994	343259	None	None
L1FLnI_14q31.3t	L1	L1	L1FLnI	chr14	86970435	86980602	+	noncoding	AL358292.1	lncRNA	SENSE	ENSG00000259061	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q31.3u	L1	L1	L1FLnI	chr14	86970435	86980612	+	noncoding	AL358292.1	lncRNA	SENSE	ENSG00000259061	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q31.3v	L1	L1	L1FLnI	chr14	87354242	87364355	-	coding	LINC02296	lncRNA	SENSE	ENSG00000258859	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q31.3w	L1	L1	L1FLnI	chr14	87413055	87423201	-	coding	LINC02296	lncRNA	SENSE	ENSG00000258859	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q31.3x	L1	L1	L1FLnI	chr14	87419814	87429803	+	coding	LINC02296	lncRNA	ANTISENSE	ENSG00000258859	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q31.3y	L1	L1	L1FLnI	chr14	87655286	87664606	+	noncoding	LINC02330	lncRNA	ANTISENSE	ENSG00000258770	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q31.3z	L1	L1	L1FLnI	chr14	87774968	87785076	-	coding	AL359237.1	lncRNA	SENSE	ENSG00000258807	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q31.3aa	L1	L1	L1FLnI	chr14	87910112	87920879	-	coding	GALC	protein_coding	SENSE	ENSG00000054983	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr14:87919688-87919689
L1FLnI_14q31.3ba	L1	L1	L1FLnI	chr14	88121715	88131846	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL133279.2	ENSG00000258975	4887	LINC01146	ENSG00000258867	23690	None	None
L1FLnI_14q31.3ca	L1	L1	L1FLnI	chr14	88166173	88174916	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL133279.3	ENSG00000259998	5582	AL133279.1	ENSG00000258538	475	chr14:88168049-88168065	None
L1FLnI_14q31.3da	L1	L1	L1FLnI	chr14	88366048	88376539	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KCNK10	ENSG00000100433	39141	AL049834.1	ENSG00000042317	8385	None	None
L1FLnI_14q31.3ea	L1	L1	L1FLnI	chr14	88442963	88452408	-	coding	AL049834.1	protein_coding	ANTISENSE	ENSG00000042317	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q31.3fa	L1	L1	L1FLnI	chr14	88442983	88452408	-	coding	AL049834.1	protein_coding	ANTISENSE	ENSG00000042317	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q31.3ga	L1	L1	L1FLnI	chr14	88455235	88465346	-	coding	AL049834.1	protein_coding	ANTISENSE	ENSG00000042317	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q31.3ha	L1	L1	L1FLnI	chr14	89098309	89108781	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MPPE1P1	ENSG00000258990	1367	AL137785.1	ENSG00000283627	72502	None	None
L1FLnI_14q32.11	L1	L1	L1FLnI	chr14	90206275	90216304	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PSMC1	ENSG00000100764	40223	KCNK13	ENSG00000152315	20422	None	None
L1FLnI_14q32.12a	L1	L1	L1FLnI	chr14	91430366	91440393	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PPP4R3A	ENSG00000100796	17218	AL133153.2	ENSG00000258798	9190	None	None
L1FLnI_14q32.12b	L1	L1	L1FLnI	chr14	91639746	91649733	-	coding	CATSPERB	protein_coding	SENSE	ENSG00000133962	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q32.12c	L1	L1	L1FLnI	chr14	92226934	92237068	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL133240.1	ENSG00000258481	16425	CPSF2	ENSG00000165934	54789	None	None
L1FLnI_14q32.12d	L1	L1	L1FLnI	chr14	92849329	92859475	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GOLGA5	ENSG00000066455	9382	LINC02833	ENSG00000258742	26877	None	None
L1FLnI_14q32.12e	L1	L1	L1FLnI	chr14	93412534	93422670	-	coding	UNC79	protein_coding	ANTISENSE	ENSG00000133958	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q32.12f	L1	L1	L1FLnI	chr14	94061992	94071867	+	noncoding	DDX24	protein_coding	ANTISENSE	ENSG00000089737	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q32.12g	L1	L1	L1FLnI	chr14	94146198	94154976	-	coding	PPP4R4	protein_coding	ANTISENSE	ENSG00000119698	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q32.13a	L1	L1	L1FLnI	chr14	94452563	94463065	-	noncoding	AL132708.1,SERPINA11,SERPINA9	lncRNA,protein_coding,protein_coding	ANTISENSE,SENSE,SENSE	ENSG00000256357,ENSG00000186910,ENSG00000170054	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	chr14:94452766-94452811,chr14:94452859-94452870
L1FLnI_14q32.13b	L1	L1	L1FLnI	chr14	94550189	94560760	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERPINA5	ENSG00000188488	682	AL132990.1	ENSG00000287668	2427	None	None
L1FLnI_14q32.13c	L1	L1	L1FLnI	chr14	94978761	94987527	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02279	ENSG00000258933	15785	AL390254.1	ENSG00000258866	59826	None	None
L1FLnI_14q32.2a	L1	L1	L1FLnI	chr14	95998060	96007472	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TUNAR	ENSG00000250366	72489	AL137190.1	ENSG00000271358	12012	None	None
L1FLnI_14q32.2b	L1	L1	L1FLnI	chr14	96644309	96653843	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL137786.2	ENSG00000287350	9948	RN7SKP108	ENSG00000223299	5795	None	None
L1FLnI_14q32.2c	L1	L1	L1FLnI	chr14	97190822	97200215	-	coding	AL158800.1	lncRNA	ANTISENSE	ENSG00000285584	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q32.2d	L1	L1	L1FLnI	chr14	97190844	97200215	-	coding	AL158800.1	lncRNA	ANTISENSE	ENSG00000285584	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q32.2e	L1	L1	L1FLnI	chr14	97670826	97681361	+	noncoding	LINC02291,AL163872.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000197176,ENSG00000287501	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q32.2f	L1	L1	L1FLnI	chr14	99704546	99713648	+	noncoding	CYP46A1	protein_coding	SENSE	ENSG00000036530	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_14q32.31	L1	L1	L1ORF2	chr14	101265197	101273242	+	coding	AL359682.1	lncRNA	SENSE	ENSG00000258497	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q32.31a	L1	L1	L1FLnI	chr14	101692072	101701081	+	noncoding	LINC02320	lncRNA	ANTISENSE	ENSG00000258404	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q32.31b	L1	L1	L1FLnI	chr14	101743748	101753888	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPP2R5C	ENSG00000078304	7910	LINC00239	ENSG00000258512	11226	None	None
L1FLnI_14q32.33a	L1	L1	L1FLnI	chr14	105869568	105878120	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IGHD1-26	ENSG00000211907	2914	IGHJ1P	ENSG00000227335	3890	None	None
L1FLnI_14q32.33b	L1	L1	L1FLnI	chr14	105955625	105965767	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ADAM6	ENSG00000271968	3962	IGHVII-1-1	ENSG00000254279	10236	None	None
L1FLnI_14q32.33c	L1	L1	L1FLnI	chr14	106098883	106108196	-	noncoding	IGHV5-10-1	IG_V_gene	SENSE	ENSG00000282651	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_14q32.33d	L1	L1	L1FLnI	chr14	106242413	106251570	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	IGHV3-22	ENSG00000253957	6192	IGHV3-21	ENSG00000211947	6819	None	None
L1FLnI_14q32.33e	L1	L1	L1FLnI	chr14	106569568	106580068	-	coding	IGHV5-51	IG_V_gene	SENSE	ENSG00000211966	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr14:106578986-106578995,chr14:106579223-106579241,chr14:106579299-106579329
L1FLnI_14q32.33f	L1	L1	L1FLnI	chr14	106571486	106580068	-	coding	IGHV5-51	IG_V_gene	SENSE	ENSG00000211966	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr14:106578986-106578995,chr14:106579223-106579241,chr14:106579299-106579329
L1FLnI_15p11.2	L1	L1	L1FLnI	chr15	17010110	17020237	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	AC138701.1	ENSG00000215567	2858318	None	None
L1FLnI_15q11.1a	L1	L1	L1FLnI	chr15	19944720	19954869	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138701.2	ENSG00000258463	45161	AC127381.2	ENSG00000274347	431	None	None
L1FLnI_15q11.1b	L1	L1	L1FLnI	chr15	20031433	20041580	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC127381.1	ENSG00000259769	4716	FAM30B	ENSG00000277988	17225	None	None
L1FLnI_15q11.1c	L1	L1	L1FLnI	chr15	20194433	20203891	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC126603.1	ENSG00000258628	24729	BMS1P15	ENSG00000258780	33607	None	None
L1FLnI_15q11.1d	L1	L1	L1FLnI	chr15	20307532	20317551	+	coding	AC026495.2	lncRNA	SENSE	ENSG00000287122	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q11.1e	L1	L1	L1FLnI	chr15	20410998	20420498	-	coding	HERC2P3	transcribed_unprocessed_pseudogene	SENSE	ENSG00000180229	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q11.1f	L1	L1	L1FLnI	chr15	20422369	20431667	-	noncoding	HERC2P3	transcribed_unprocessed_pseudogene	SENSE	ENSG00000180229	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q11.2a	L1	L1	L1FLnI	chr15	20625352	20635738	+	noncoding	AC023310.2	processed_pseudogene	ANTISENSE	ENSG00000258707	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q11.2b	L1	L1	L1FLnI	chr15	21038087	21048231	-	noncoding	LINC01193	lncRNA	ANTISENSE	ENSG00000258710	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q11.2c	L1	L1	L1FLnI	chr15	21619841	21628515	-	noncoding	LINC02203	protein_coding	ANTISENSE	ENSG00000280709	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q11.2d	L1	L1	L1FLnI	chr15	21670014	21680460	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC135068.4	ENSG00000279445	2578	LINC02203	ENSG00000280709	16738	None	None
L1FLnI_15q11.2e	L1	L1	L1FLnI	chr15	21670994	21680460	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC135068.4	ENSG00000279445	2578	LINC02203	ENSG00000280709	17718	None	None
L1FLnI_15q11.2f	L1	L1	L1FLnI	chr15	22062435	22071102	-	noncoding	AC134980.3,OR4M2	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000285472,ENSG00000274102	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q11.2g	L1	L1	L1FLnI	chr15	22112488	22122928	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OR4N3P	ENSG00000259435	2583	AC134980.3	ENSG00000285472	16631	None	None
L1FLnI_15q11.2h	L1	L1	L1FLnI	chr15	22299193	22308500	+	NA	None	NA	NA	None	INTERGENIC	NA	NA	AC025884.1	ENSG00000258732	16321	AC100757.2	ENSG00000274835	52139	None	None
L1FLnI_15q11.2i	L1	L1	L1FLnI	chr15	22364650	22375038	-	noncoding	AC100757.1	processed_pseudogene	ANTISENSE	ENSG00000273679	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr15:22371538-22371546
L1FLnI_15q11.2j	L1	L1	L1FLnI	chr15	23710571	23720596	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NDN	ENSG00000182636	23266	AC087490.1	ENSG00000286973	36519	None	None
L1FLnI_15q11.2k	L1	L1	L1FLnI	chr15	24039696	24049848	+	coding	PWRN4	lncRNA	SENSE	ENSG00000260232	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q11.2l	L1	L1	L1FLnI	chr15	24633428	24643529	-	noncoding	PWRN1,AC090983.2	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000259905,ENSG00000286110	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q11.2m	L1	L1	L1FLnI	chr15	24713866	24722839	-	noncoding	PWRN1,AC090983.2	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000259905,ENSG00000286110	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q11.2n	L1	L1	L1FLnI	chr15	25146905	25156493	+	noncoding	SNHG14	lncRNA	SENSE	ENSG00000224078	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr15:25149191-25149219,chr15:25149571-25149582,chr15:25151692-25151737,chr15:25153504-25153513
L1FLnI_15q11.2o	L1	L1	L1FLnI	chr15	25252115	25262249	+	noncoding	SNHG14,AC124303.2	lncRNA,TEC	SENSE,SENSE	ENSG00000224078,ENSG00000280234	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q12a	L1	L1	L1FLnI	chr15	26150398	26159395	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC012060.1	ENSG00000286884	102274	LINC00929	ENSG00000259150	16397	None	None
L1FLnI_15q12b	L1	L1	L1FLnI	chr15	26283952	26293399	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02248	ENSG00000235160	101638	AC012060.1	ENSG00000286884	18034	None	None
L1FLnI_15q12c	L1	L1	L1FLnI	chr15	26494732	26505894	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GABRB3	ENSG00000166206	37652	AC009878.2	ENSG00000287280	16892	None	chr15:26503326-26503327
L1FLnI_15q12d	L1	L1	L1FLnI	chr15	26527557	26538115	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC009878.2	ENSG00000287280	49717	GABRB3	ENSG00000166206	5431	None	None
L1FLnI_15q12e	L1	L1	L1FLnI	chr15	27187228	27197372	-	coding	GABRG3	protein_coding	ANTISENSE	ENSG00000182256	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q12f	L1	L1	L1FLnI	chr15	27635224	27644954	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC021979.1	ENSG00000258594	5935	AC021979.3	ENSG00000287922	17761	None	None
L1FLnI_15q13.1a	L1	L1	L1FLnI	chr15	28154273	28164381	-	noncoding	HERC2	protein_coding	SENSE	ENSG00000128731	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q13.1b	L1	L1	L1FLnI	chr15	29158301	29168834	+	noncoding	FAM189A1	protein_coding	ANTISENSE	ENSG00000104059	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr15:29159450-29159454
L1FLnI_15q13.1c	L1	L1	L1FLnI	chr15	29501650	29511042	+	noncoding	FAM189A1	protein_coding	ANTISENSE	ENSG00000104059	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q13.2a	L1	L1	L1FLnI	chr15	30239862	30249898	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-17P	ENSG00000206972	4504	AC135731.1	ENSG00000259993	14298	None	None
L1FLnI_15q13.2b	L1	L1	L1FLnI	chr15	30340698	30350857	-	coding	AC019322.6	TEC	SENSE	ENSG00000279417	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q13.2c	L1	L1	L1FLnI	chr15	30732136	30742517	+	noncoding	AC091057.1	lncRNA	SENSE	ENSG00000187951	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q13.2d	L1	L1	L1FLnI	chr15	30771679	30781906	+	coding	AC091057.1	lncRNA	SENSE	ENSG00000187951	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q13.2e	L1	L1	L1FLnI	chr15	30771679	30781890	+	coding	AC091057.1	lncRNA	SENSE	ENSG00000187951	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q13.2f	L1	L1	L1FLnI	chr15	30848123	30858253	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC087481.1	ENSG00000260382	24014	HERC2P10	ENSG00000259845	3970	None	None
L1FLnI_15q13.3a	L1	L1	L1FLnI	chr15	31594709	31605115	+	noncoding	OTUD7A	protein_coding	ANTISENSE	ENSG00000169918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q13.3b	L1	L1	L1FLnI	chr15	31617278	31627403	-	coding	OTUD7A	protein_coding	SENSE	ENSG00000169918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q13.3c	L1	L1	L1FLnI	chr15	31626592	31636772	-	coding	OTUD7A	protein_coding	SENSE	ENSG00000169918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q13.3d	L1	L1	L1FLnI	chr15	31663178	31673631	-	noncoding	OTUD7A	protein_coding	SENSE	ENSG00000169918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q13.3e	L1	L1	L1FLnI	chr15	32045177	32055286	-	coding	CHRNA7	protein_coding	ANTISENSE	ENSG00000175344	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q13.3f	L1	L1	L1FLnI	chr15	32139427	32149549	-	noncoding	CHRNA7	protein_coding	ANTISENSE	ENSG00000175344	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q13.3g	L1	L1	L1FLnI	chr15	32179931	32190074	+	coding	AC068448.2	TEC	SENSE	ENSG00000279912	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q13.3h	L1	L1	L1FLnI	chr15	32288771	32298810	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-18P	ENSG00000207257	4513	AC139426.1	ENSG00000260211	14316	None	None
L1FLnI_15q14a	L1	L1	L1FLnI	chr15	33754353	33764110	+	coding	RYR3	protein_coding	SENSE	ENSG00000198838	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q14b	L1	L1	L1FLnI	chr15	34162460	34172591	+	coding	KATNBL1	protein_coding	ANTISENSE	ENSG00000134152	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q14c	L1	L1	L1FLnI	chr15	34286498	34296648	-	noncoding	SLC12A6	protein_coding	SENSE	ENSG00000140199	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q14d	L1	L1	L1FLnI	chr15	35385348	35395484	-	coding	DPH6	protein_coding	SENSE	ENSG00000134146	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q14e	L1	L1	L1FLnI	chr15	36191874	36201902	+	coding	AC021351.1	lncRNA	ANTISENSE	ENSG00000259639	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q14f	L1	L1	L1FLnI	chr15	36191874	36201889	+	coding	AC021351.1	lncRNA	ANTISENSE	ENSG00000259639	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q14g	L1	L1	L1FLnI	chr15	37278281	37287307	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068875.1	ENSG00000259434	76713	AC087283.1	ENSG00000270304	23329	None	None
L1FLnI_15q14h	L1	L1	L1FLnI	chr15	37302784	37312930	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC068875.1	ENSG00000259434	51090	AC087283.1	ENSG00000270304	47832	None	None
L1FLnI_15q14i	L1	L1	L1FLnI	chr15	37316467	37326241	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC087283.1	ENSG00000270304	61515	AC068875.1	ENSG00000259434	37779	None	None
L1FLnI_15q14j	L1	L1	L1FLnI	chr15	37398973	37408976	-	coding	AC068875.1	lncRNA	SENSE	ENSG00000259434	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q14k	L1	L1	L1FLnI	chr15	37404353	37413526	+	noncoding	AC068875.1	lncRNA	ANTISENSE	ENSG00000259434	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q14l	L1	L1	L1FLnI	chr15	37423658	37433681	+	coding	AC068875.1	lncRNA	ANTISENSE	ENSG00000259434	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q14m	L1	L1	L1FLnI	chr15	37469055	37477684	+	coding	AC068875.1	lncRNA	ANTISENSE	ENSG00000259434	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q14n	L1	L1	L1FLnI	chr15	37528163	37536675	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC016304.1	ENSG00000243122	37060	TMCO5A	ENSG00000166069	385264	None	None
L1FLnI_15q14o	L1	L1	L1FLnI	chr15	37998707	38008453	-	noncoding	LINC02345	lncRNA	ANTISENSE	ENSG00000259225	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr15:38004717-38004743
L1FLnI_15q14p	L1	L1	L1FLnI	chr15	38115922	38125990	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01852	ENSG00000236914	42932	AC087473.1	ENSG00000259380	13605	None	None
L1FLnI_15q14q	L1	L1	L1FLnI	chr15	38136167	38146340	-	coding	AC087473.1	lncRNA	SENSE	ENSG00000259380	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q14r	L1	L1	L1FLnI	chr15	38567128	38577532	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02694	ENSG00000175779	50473	RASGRP1	ENSG00000172575	1553	None	None
L1FLnI_15q14s	L1	L1	L1FLnI	chr15	38577237	38587368	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RASGRP1	ENSG00000172575	11662	LINC02694	ENSG00000175779	40637	None	None
L1FLnI_15q14t	L1	L1	L1FLnI	chr15	38773121	38783212	-	noncoding	LINC02694	lncRNA	ANTISENSE	ENSG00000175779	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q14u	L1	L1	L1FLnI	chr15	38779251	38789263	+	coding	LINC02694	lncRNA	SENSE	ENSG00000175779	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q14v	L1	L1	L1FLnI	chr15	38796997	38807427	-	coding	LINC02694	lncRNA	ANTISENSE	ENSG00000175779	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q14w	L1	L1	L1FLnI	chr15	38834451	38844592	-	coding	LINC02694	lncRNA	ANTISENSE	ENSG00000175779	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr15:38843012-38843100,chr15:38844215-38844548	None
L1FLnI_15q14x	L1	L1	L1FLnI	chr15	38977065	38986380	-	noncoding	LINC02694,AC013652.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000175779,ENSG00000259345	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr15:38984366-38984573	None
L1FLnI_15q14y	L1	L1	L1FLnI	chr15	39111713	39121797	+	noncoding	LINC02694,AC013652.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000175779,ENSG00000259345	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr15:39118685-39118693,chr15:39118717-39118741,chr15:39118742-39118753
L1FLnI_15q14z	L1	L1	L1FLnI	chr15	39417072	39427088	+	coding	AC013652.1	lncRNA	ANTISENSE	ENSG00000259345	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr15:39426915-39426918
L1FLnI_15q15.1	L1	L1	L1FLnI	chr15	42245797	42255880	-	coding	TMEM87A	protein_coding	SENSE	ENSG00000103978	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q15.2	L1	L1	L1FLnI	chr15	42760634	42770756	+	noncoding	TTBK2	protein_coding	ANTISENSE	ENSG00000128881	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q15.3a	L1	L1	L1FLnI	chr15	43646477	43656502	+	coding	CATSPER2,PDIA3P2	protein_coding,unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000166762,ENSG00000224677	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr15:43648831-43648854
L1FLnI_15q15.3b	L1	L1	L1FLnI	chr15	44035059	44045419	+	noncoding	FRMD5	protein_coding	ANTISENSE	ENSG00000171877	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q15.3c	L1	L1	L1FLnI	chr15	44248536	44258549	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FRMD5	ENSG00000171877	53265	CASC4	ENSG00000166734	30170	None	None
L1FLnI_15q15.3d	L1	L1	L1FLnI	chr15	44356119	44364707	+	coding	CASC4	protein_coding	SENSE	ENSG00000166734	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q15.3e	L1	L1	L1FLnI	chr15	44356122	44364707	+	coding	CASC4	protein_coding	SENSE	ENSG00000166734	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.1a	L1	L1	L1FLnI	chr15	44890048	44900172	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090888.3	ENSG00000259742	14630	RNU1-119P	ENSG00000212424	5268	None	None
L1FLnI_15q21.1b	L1	L1	L1FLnI	chr15	44987645	44996475	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TERB2	ENSG00000167014	8416	RNU1-78P	ENSG00000212550	6389	None	None
L1FLnI_15q21.1c	L1	L1	L1FLnI	chr15	45015780	45024723	-	coding	SORD	protein_coding	ANTISENSE	ENSG00000140263	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr15:45021633-45021639,chr15:45023129-45023132,chr15:45023140-45023242,chr15:45023104-45023111
L1FLnI_15q21.1d	L1	L1	L1FLnI	chr15	45871450	45879971	+	noncoding	AC068722.1	lncRNA	SENSE	ENSG00000259200	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.1e	L1	L1	L1FLnI	chr15	46101055	46111166	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC068714.1	ENSG00000259743	663	AC091074.3	ENSG00000287020	206227	None	None
L1FLnI_15q21.1f	L1	L1	L1FLnI	chr15	46153572	46164551	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068714.1	ENSG00000259743	53180	AC091074.3	ENSG00000287020	152842	None	None
L1FLnI_15q21.1g	L1	L1	L1FLnI	chr15	46285246	46294083	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC091074.3	ENSG00000287020	23310	AC068714.1	ENSG00000259743	184854	None	None
L1FLnI_15q21.1h	L1	L1	L1FLnI	chr15	46350309	46359361	+	coding	AC091074.3,AC091074.1	lncRNA,snoRNA	SENSE,ANTISENSE	ENSG00000287020,ENSG00000238819	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.1i	L1	L1	L1FLnI	chr15	46421431	46431560	+	noncoding	AC012405.1	lncRNA	SENSE	ENSG00000287704	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.1j	L1	L1	L1FLnI	chr15	46535742	46545882	-	coding	AC012405.1	lncRNA	ANTISENSE	ENSG00000287704	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.1k	L1	L1	L1FLnI	chr15	46561263	46570247	-	noncoding	AC012405.1	lncRNA	ANTISENSE	ENSG00000287704	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.1l	L1	L1	L1FLnI	chr15	46741499	46750115	+	coding	AC073941.1	lncRNA	SENSE	ENSG00000259255	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.1m	L1	L1	L1FLnI	chr15	46788906	46798959	+	noncoding	AC073941.1	lncRNA	SENSE	ENSG00000259255	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.1n	L1	L1	L1FLnI	chr15	46905836	46914463	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073941.2	ENSG00000259509	77878	AC066615.1	ENSG00000284540	219032	None	None
L1FLnI_15q21.1o	L1	L1	L1FLnI	chr15	46905836	46914423	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC073941.2	ENSG00000259509	77878	AC066615.1	ENSG00000284540	219072	None	None
L1FLnI_15q21.1p	L1	L1	L1FLnI	chr15	46990283	46999458	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC066615.1	ENSG00000284540	134037	AC073941.2	ENSG00000259509	162325	None	None
L1FLnI_15q21.1q	L1	L1	L1FLnI	chr15	47162034	47172060	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC066615.1	ENSG00000284540	27912	SEMA6D	ENSG00000137872	12041	None	None
L1FLnI_15q21.1r	L1	L1	L1FLnI	chr15	48907366	48917523	-	noncoding	SHC4	protein_coding	SENSE	ENSG00000185634	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.1s	L1	L1	L1FLnI	chr15	49065058	49074187	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SECISBP2L	ENSG00000138593	18611	AC013452.3	ENSG00000259656	27604	None	None
L1FLnI_15q21.2a	L1	L1	L1FLnI	chr15	49259080	49269224	-	coding	GALK2	protein_coding	ANTISENSE	ENSG00000156958	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.2b	L1	L1	L1FLnI	chr15	49350735	49360752	+	coding	GALK2,FAM227B,AC022306.3	protein_coding,protein_coding,lncRNA	SENSE,ANTISENSE,SENSE	ENSG00000156958,ENSG00000166262,ENSG00000276593	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.2c	L1	L1	L1FLnI	chr15	49392485	49402514	+	coding	FAM227B	protein_coding	ANTISENSE	ENSG00000166262	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.2d	L1	L1	L1FLnI	chr15	49401768	49411036	-	noncoding	FAM227B	protein_coding	SENSE	ENSG00000166262	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.2e	L1	L1	L1FLnI	chr15	49556456	49565479	+	noncoding	FAM227B	protein_coding	ANTISENSE	ENSG00000166262	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.2f	L1	L1	L1FLnI	chr15	49731439	49741256	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DTWD1	ENSG00000104047	75207	AC025040.2	ENSG00000259388	52990	None	None
L1FLnI_15q21.2g	L1	L1	L1FLnI	chr15	49778011	49788018	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC025040.2	ENSG00000259388	6228	DTWD1	ENSG00000104047	121779	None	None
L1FLnI_15q21.2h	L1	L1	L1FLnI	chr15	49832721	49842867	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ATP8B4	ENSG00000104043	15371	AC025040.2	ENSG00000259388	36624	None	None
L1FLnI_15q21.2i	L1	L1	L1FLnI	chr15	49904753	49913328	+	noncoding	ATP8B4	protein_coding	ANTISENSE	ENSG00000104043	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr15:49909719-49909742	None
L1FLnI_15q21.2j	L1	L1	L1FLnI	chr15	49948057	49957632	-	noncoding	ATP8B4	protein_coding	SENSE	ENSG00000104043	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr15:49950585-49950591
L1FLnI_15q21.2k	L1	L1	L1FLnI	chr15	49962328	49972783	+	noncoding	ATP8B4	protein_coding	ANTISENSE	ENSG00000104043	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.2l	L1	L1	L1FLnI	chr15	50208606	50217105	+	noncoding	SLC27A2	protein_coding	SENSE	ENSG00000140284	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.2m	L1	L1	L1FLnI	chr15	50955727	50964331	+	noncoding	AP4E1	protein_coding	SENSE	ENSG00000081014	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.2n	L1	L1	L1FLnI	chr15	51031131	51041149	-	coding	MIR4713HG	lncRNA	ANTISENSE	ENSG00000259240	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr15:51037816-51038202	None
L1ORF2_15q21.2	L1	L1	L1ORF2	chr15	51172500	51180025	+	coding	MIR4713HG	lncRNA	SENSE	ENSG00000259240	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.2o	L1	L1	L1FLnI	chr15	51416718	51426746	-	coding	AC066613.2	lncRNA	ANTISENSE	ENSG00000259678	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.2p	L1	L1	L1FLnI	chr15	51587448	51597584	+	noncoding	DMXL2	protein_coding	ANTISENSE	ENSG00000104093	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr15:51589004-51589281	None
L1FLnI_15q21.2q	L1	L1	L1FLnI	chr15	51783360	51793525	+	coding	TMOD2	protein_coding	SENSE	ENSG00000128872	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.2r	L1	L1	L1FLnI	chr15	52471900	52482053	-	coding	MYO5A	protein_coding	SENSE	ENSG00000197535	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr15:52478975-52479258,chr15:52481950-52482274	chr15:52481087-52481113
L1FLnI_15q21.3a	L1	L1	L1FLnI	chr15	52820692	52830641	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016044.1	ENSG00000259203	14720	RPSAP55	ENSG00000214896	54954	None	None
L1FLnI_15q21.3b	L1	L1	L1FLnI	chr15	53047512	53056287	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	EEF1A1P22	ENSG00000259612	108994	LINC02490	ENSG00000259237	60078	None	None
L1FLnI_15q21.3c	L1	L1	L1FLnI	chr15	53047512	53056298	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	EEF1A1P22	ENSG00000259612	108994	LINC02490	ENSG00000259237	60067	None	None
L1FLnI_15q21.3d	L1	L1	L1FLnI	chr15	53134944	53144975	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC066614.1	ENSG00000287596	274890	LINC02490	ENSG00000259237	5246	None	None
L1FLnI_15q21.3e	L1	L1	L1FLnI	chr15	53179750	53189702	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02490	ENSG00000259237	50052	AC066614.1	ENSG00000287596	230163	None	None
L1FLnI_15q21.3f	L1	L1	L1FLnI	chr15	53179750	53189698	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02490	ENSG00000259237	50052	AC066614.1	ENSG00000287596	230167	None	None
L1FLnI_15q21.3g	L1	L1	L1FLnI	chr15	53537135	53547177	+	coding	WDR72	protein_coding	ANTISENSE	ENSG00000166415	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.3h	L1	L1	L1FLnI	chr15	53680701	53690729	+	coding	WDR72	protein_coding	ANTISENSE	ENSG00000166415	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.3i	L1	L1	L1FLnI	chr15	54052568	54061630	+	coding	UNC13C	protein_coding	SENSE	ENSG00000137766	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.3j	L1	L1	L1FLnI	chr15	54077331	54085998	-	noncoding	UNC13C	protein_coding	ANTISENSE	ENSG00000137766	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr15:54080019-54080025
L1FLnI_15q21.3k	L1	L1	L1FLnI	chr15	54194907	54203972	+	noncoding	UNC13C	protein_coding	SENSE	ENSG00000137766	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.3l	L1	L1	L1FLnI	chr15	54444324	54454417	-	noncoding	UNC13C	protein_coding	ANTISENSE	ENSG00000137766	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.3m	L1	L1	L1FLnI	chr15	54454337	54464173	-	noncoding	UNC13C	protein_coding	ANTISENSE	ENSG00000137766	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.3n	L1	L1	L1FLnI	chr15	54589098	54598259	-	noncoding	UNC13C	protein_coding	ANTISENSE	ENSG00000137766	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.3o	L1	L1	L1FLnI	chr15	54640558	54649066	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UNC13C	ENSG00000137766	7144	AC025272.1	ENSG00000260937	407657	None	None
L1FLnI_15q21.3p	L1	L1	L1FLnI	chr15	54666305	54674999	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UNC13C	ENSG00000137766	32891	AC025272.1	ENSG00000260937	381724	None	None
L1FLnI_15q21.3q	L1	L1	L1FLnI	chr15	54695321	54705473	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	UNC13C	ENSG00000137766	61907	AC025272.1	ENSG00000260937	351250	None	None
L1FLnI_15q21.3r	L1	L1	L1FLnI	chr15	54745776	54755915	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UNC13C	ENSG00000137766	112362	AC025272.1	ENSG00000260937	300808	None	None
L1FLnI_15q21.3s	L1	L1	L1FLnI	chr15	54760007	54769125	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UNC13C	ENSG00000137766	126593	AC025272.1	ENSG00000260937	287598	None	None
L1FLnI_15q21.3t	L1	L1	L1FLnI	chr15	54847233	54856379	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	UNC13C	ENSG00000137766	213819	AC025272.1	ENSG00000260937	200344	None	None
L1FLnI_15q21.3u	L1	L1	L1FLnI	chr15	54868207	54878344	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UNC13C	ENSG00000137766	234793	AC025272.1	ENSG00000260937	178379	None	None
L1FLnI_15q21.3v	L1	L1	L1FLnI	chr15	54904989	54915431	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UNC13C	ENSG00000137766	271575	AC025272.1	ENSG00000260937	141292	None	None
L1FLI_15q21.3	L1	L1	L1FLI	chr15	54925055	54933102	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC025272.1	ENSG00000260937	123621	UNC13C	ENSG00000137766	291641	None	None
L1FLnI_15q21.3w	L1	L1	L1FLnI	chr15	54941262	54950716	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	UNC13C	ENSG00000137766	307848	AC025272.1	ENSG00000260937	106007	None	None
L1FLnI_15q21.3x	L1	L1	L1FLnI	chr15	55060495	55070491	+	coding	AC025272.1	lncRNA	SENSE	ENSG00000260937	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.3y	L1	L1	L1FLnI	chr15	55139688	55149815	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC025272.1	ENSG00000260937	47511	AC011912.1	ENSG00000279145	21563	None	None
L1FLnI_15q21.3z	L1	L1	L1FLnI	chr15	55940523	55950462	+	noncoding	NEDD4	protein_coding	ANTISENSE	ENSG00000069869	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.3aa	L1	L1	L1FLnI	chr15	56134120	56144128	-	coding	RFX7	protein_coding	SENSE	ENSG00000181827	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chr15:56142176-56142438	None
L1FLnI_15q21.3ba	L1	L1	L1FLnI	chr15	56145926	56156273	+	coding	RFX7	protein_coding	ANTISENSE	ENSG00000181827	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.3ca	L1	L1	L1FLnI	chr15	56310645	56320677	-	coding	TEX9	protein_coding	ANTISENSE	ENSG00000151575	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.3da	L1	L1	L1FLnI	chr15	56323928	56333130	+	noncoding	TEX9	protein_coding	SENSE	ENSG00000151575	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.3ea	L1	L1	L1FLnI	chr15	56395491	56405642	+	coding	TEX9,AC084782.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000151575,ENSG00000259941	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.3fa	L1	L1	L1FLnI	chr15	56515186	56524278	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MNS1	ENSG00000138587	50049	AC090518.1	ENSG00000260392	18674	chr15:56521252-56521355	chr15:56518882-56518887
L1FLnI_15q21.3ga	L1	L1	L1FLnI	chr15	56557917	56568075	+	coding	AC090518.1	lncRNA	ANTISENSE	ENSG00000260392	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.3ha	L1	L1	L1FLnI	chr15	56564590	56574908	+	coding	AC090518.1	lncRNA	ANTISENSE	ENSG00000260392	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.3ia	L1	L1	L1FLnI	chr15	57808656	57819056	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ALDH1A2	ENSG00000128918	134368	POLR2M	ENSG00000255529	25894	None	None
L1FLnI_15q21.3ja	L1	L1	L1FLnI	chr15	58022900	58033014	+	noncoding	ALDH1A2	protein_coding	ANTISENSE	ENSG00000128918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.3ka	L1	L1	L1FLnI	chr15	58122233	58132261	+	coding	ALDH1A2	protein_coding	ANTISENSE	ENSG00000128918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.3la	L1	L1	L1FLnI	chr15	58189870	58200052	+	coding	ALDH1A2	protein_coding	ANTISENSE	ENSG00000128918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q21.3ma	L1	L1	L1FLnI	chr15	58322257	58331019	-	noncoding	ALDH1A2	protein_coding	SENSE	ENSG00000128918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr15:58329855-58330462	None
L1FLnI_15q21.3na	L1	L1	L1FLnI	chr15	58359107	58369563	+	noncoding	ALDH1A2	protein_coding	ANTISENSE	ENSG00000128918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q22.2a	L1	L1	L1FLnI	chr15	59125053	59134897	-	coding	AC092757.2,MYO1E	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000259732,ENSG00000157483	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q22.2b	L1	L1	L1FLnI	chr15	59465196	59474241	-	noncoding	FAM81A	protein_coding	ANTISENSE	ENSG00000157470	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q22.2c	L1	L1	L1FLnI	chr15	59799904	59809994	+	coding	AC092079.2	lncRNA	ANTISENSE	ENSG00000286495	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q22.2d	L1	L1	L1FLnI	chr15	60233678	60243813	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC037433.1	ENSG00000287915	10406	ANXA2	ENSG00000182718	103321	None	None
L1FLnI_15q22.2e	L1	L1	L1FLnI	chr15	60946447	60954954	+	coding	RORA	protein_coding	ANTISENSE	ENSG00000069667	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q22.2f	L1	L1	L1FLnI	chr15	61358674	61369071	-	noncoding	AC104574.2	lncRNA	SENSE	ENSG00000259616	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q22.2g	L1	L1	L1FLnI	chr15	61358674	61367799	-	noncoding	AC104574.2	lncRNA	SENSE	ENSG00000259616	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q22.2h	L1	L1	L1FLnI	chr15	61892739	61902774	+	coding	AC009554.1,VPS13C,AC009554.2	lncRNA,protein_coding,lncRNA	SENSE,ANTISENSE,SENSE	ENSG00000259564,ENSG00000129003,ENSG00000285863	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q22.31a	L1	L1	L1FLnI	chr15	63616511	63625542	-	coding	HERC1	protein_coding	SENSE	ENSG00000103657	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q22.31b	L1	L1	L1FLnI	chr15	63956858	63966966	-	noncoding	DAPK2	protein_coding	SENSE	ENSG00000035664	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q22.31c	L1	L1	L1FLnI	chr15	64323162	64333185	+	coding	CSNK1G1,AC087632.2	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000169118,ENSG00000259316	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q22.31d	L1	L1	L1FLnI	chr15	64323162	64333200	+	coding	CSNK1G1,AC087632.2	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000169118,ENSG00000259316	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q23a	L1	L1	L1FLnI	chr15	67447731	67457859	-	coding	IQCH,IQCH-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000103599,ENSG00000259673	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q23b	L1	L1	L1FLnI	chr15	69616532	69626660	-	coding	DRAIC	lncRNA	ANTISENSE	ENSG00000245750	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr15:69624025-69624684	None
L1FLnI_15q23c	L1	L1	L1FLnI	chr15	69765935	69775695	+	coding	DRAIC	lncRNA	SENSE	ENSG00000245750	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr15:69767200-69767488	None
L1FLnI_15q23d	L1	L1	L1FLnI	chr15	70364349	70374407	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC048383.1	ENSG00000259503	37607	LINC02205	ENSG00000259473	129500	None	None
L1FLI_15q23a	L1	L1	L1FLI	chr15	70728653	70736174	+	coding	UACA	protein_coding	ANTISENSE	ENSG00000137831	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q23e	L1	L1	L1FLnI	chr15	70967489	70977241	-	coding	LRRC49	protein_coding	ANTISENSE	ENSG00000137821	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q23f	L1	L1	L1FLnI	chr15	70967503	70977241	-	coding	LRRC49	protein_coding	ANTISENSE	ENSG00000137821	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q23g	L1	L1	L1FLnI	chr15	70984136	70994281	-	coding	LRRC49	protein_coding	ANTISENSE	ENSG00000137821	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q23h	L1	L1	L1FLnI	chr15	70984148	70994281	-	coding	LRRC49	protein_coding	ANTISENSE	ENSG00000137821	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q23i	L1	L1	L1FLnI	chr15	71026087	71035940	-	noncoding	LRRC49	protein_coding	ANTISENSE	ENSG00000137821	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q23j	L1	L1	L1FLnI	chr15	71157954	71166767	-	coding	THSD4,THSD4-AS1,HMGB1P6	protein_coding,lncRNA,processed_pseudogene	ANTISENSE,SENSE,SENSE	ENSG00000187720,ENSG00000259964,ENSG00000259781	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_15q23b	L1	L1	L1FLI	chr15	71173134	71181170	+	coding	THSD4,THSD4-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000187720,ENSG00000259964	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q23k	L1	L1	L1FLnI	chr15	71261654	71270972	+	coding	THSD4	protein_coding	SENSE	ENSG00000187720	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr15:71270845-71270850
L1FLnI_15q23l	L1	L1	L1FLnI	chr15	71366794	71376497	-	coding	THSD4	protein_coding	ANTISENSE	ENSG00000187720	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q23m	L1	L1	L1FLnI	chr15	71792524	71802056	-	coding	NR2E3	protein_coding	ANTISENSE	ENSG00000278570	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr15:71799473-71799474
L1FLnI_15q23n	L1	L1	L1FLnI	chr15	72080105	72088612	-	noncoding	MYO9A	protein_coding	SENSE	ENSG00000066933	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q24.1a	L1	L1	L1FLnI	chr15	73215436	73225582	-	noncoding	NEO1	protein_coding	ANTISENSE	ENSG00000067141	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q24.1b	L1	L1	L1FLnI	chr15	73444202	73454625	+	coding	REC114	protein_coding	SENSE	ENSG00000183324	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q24.1c	L1	L1	L1FLnI	chr15	73507947	73517970	-	coding	REC114	protein_coding	ANTISENSE	ENSG00000183324	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q24.2a	L1	L1	L1FLnI	chr15	75971304	75981271	-	coding	NRG4	protein_coding	SENSE	ENSG00000169752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr15:75978936-75978942
L1FLnI_15q24.2b	L1	L1	L1FLnI	chr15	76012855	76023307	-	noncoding	NRG4	protein_coding	SENSE	ENSG00000169752	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q24.2c	L1	L1	L1FLnI	chr15	76092617	76103035	-	noncoding	TMEM266	protein_coding	ANTISENSE	ENSG00000169758	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q24.2d	L1	L1	L1FLnI	chr15	76092638	76103035	-	noncoding	TMEM266	protein_coding	ANTISENSE	ENSG00000169758	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q24.3a	L1	L1	L1FLnI	chr15	76420126	76429957	-	coding	SCAPER	protein_coding	SENSE	ENSG00000140386	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q24.3b	L1	L1	L1FLnI	chr15	76589023	76599450	+	noncoding	SCAPER	protein_coding	ANTISENSE	ENSG00000140386	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q24.3c	L1	L1	L1FLnI	chr15	76602539	76612670	-	coding	SCAPER	protein_coding	SENSE	ENSG00000140386	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q24.3d	L1	L1	L1FLnI	chr15	76626862	76635689	-	noncoding	SCAPER	protein_coding	SENSE	ENSG00000140386	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q24.3e	L1	L1	L1FLnI	chr15	76719428	76728498	-	coding	SCAPER	protein_coding	SENSE	ENSG00000140386	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q24.3f	L1	L1	L1FLnI	chr15	76776416	76786540	+	coding	SCAPER	protein_coding	ANTISENSE	ENSG00000140386	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q24.3g	L1	L1	L1FLnI	chr15	76883682	76893836	+	coding	SCAPER	protein_coding	ANTISENSE	ENSG00000140386	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q24.3h	L1	L1	L1FLnI	chr15	77150013	77160144	-	coding	PEAK1	protein_coding	SENSE	ENSG00000173517	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q24.3i	L1	L1	L1FLnI	chr15	77257259	77266764	+	coding	PEAK1	protein_coding	ANTISENSE	ENSG00000173517	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.1a	L1	L1	L1FLnI	chr15	78375465	78385601	-	coding	AC011270.1	processed_pseudogene	ANTISENSE	ENSG00000259413	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.1b	L1	L1	L1FLnI	chr15	78604086	78614230	+	noncoding	CHRNA3	protein_coding	ANTISENSE	ENSG00000080644	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.1c	L1	L1	L1FLnI	chr15	78716336	78726353	+	coding	CHRNB4,AC022748.2	protein_coding,transcribed_unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000117971,ENSG00000261303	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.1d	L1	L1	L1FLnI	chr15	79485285	79495318	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC023968.2	ENSG00000259493	63938	MINAR1	ENSG00000169330	12981	None	None
L1FLnI_15q25.1e	L1	L1	L1FLnI	chr15	79744589	79754613	-	coding	AC026826.1	processed_pseudogene	SENSE	ENSG00000213527	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.1f	L1	L1	L1FLnI	chr15	79776247	79784748	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC026826.2	ENSG00000259229	17485	RNU6-667P	ENSG00000252995	32601	None	None
L1FLnI_15q25.2a	L1	L1	L1FLnI	chr15	81578176	81587495	+	coding	AC060809.1,AC023034.1	lncRNA,lncRNA	SENSE,SENSE	ENSG00000259543,ENSG00000259594	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.2b	L1	L1	L1FLnI	chr15	81668015	81678004	-	coding	AC060809.1,AC023034.1,AC104041.1	lncRNA,lncRNA,lncRNA	ANTISENSE,ANTISENSE,SENSE	ENSG00000259543,ENSG00000259594,ENSG00000259692	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.2c	L1	L1	L1FLnI	chr15	81674664	81683817	+	noncoding	AC060809.1,AC023034.1,AC104041.1	lncRNA,lncRNA,lncRNA	SENSE,SENSE,ANTISENSE	ENSG00000259543,ENSG00000259594,ENSG00000259692	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.2d	L1	L1	L1FLnI	chr15	81693667	81703674	+	coding	AC060809.1,AC023034.1,AC104041.1	lncRNA,lncRNA,lncRNA	SENSE,SENSE,ANTISENSE	ENSG00000259543,ENSG00000259594,ENSG00000259692	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.2e	L1	L1	L1FLnI	chr15	81726782	81736808	+	coding	AC060809.1,AC104041.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000259543,ENSG00000259692	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.2f	L1	L1	L1FLnI	chr15	81794432	81804463	+	coding	AC104041.1	lncRNA	ANTISENSE	ENSG00000259692	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.2g	L1	L1	L1FLnI	chr15	81867169	81877199	+	coding	AC104041.1	lncRNA	ANTISENSE	ENSG00000259692	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.2h	L1	L1	L1FLnI	chr15	81991668	82001696	+	coding	AC104041.1	lncRNA	ANTISENSE	ENSG00000259692	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.2i	L1	L1	L1FLnI	chr15	82882395	82892419	-	coding	HOMER2	protein_coding	SENSE	ENSG00000103942	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.2j	L1	L1	L1FLnI	chr15	83380153	83390116	+	coding	AC103876.1	lncRNA	SENSE	ENSG00000259986	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.2k	L1	L1	L1FLnI	chr15	83450306	83460334	-	coding	SH3GL3	protein_coding	ANTISENSE	ENSG00000140600	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.2l	L1	L1	L1FLnI	chr15	83724890	83733538	-	noncoding	ADAMTSL3	protein_coding	ANTISENSE	ENSG00000156218	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.2m	L1	L1	L1FLnI	chr15	83857182	83867271	+	coding	ADAMTSL3	protein_coding	SENSE	ENSG00000156218	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.2n	L1	L1	L1FLnI	chr15	83959220	83969655	+	noncoding	ADAMTSL3,AC027807.2	protein_coding,lncRNA	SENSE,SENSE	ENSG00000156218,ENSG00000274128	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.2o	L1	L1	L1FLnI	chr15	84263603	84273045	-	NA	None	NA	NA	None	INTERGENIC	NA	NA	AC243562.2	ENSG00000259683	116684	UBE2Q2P8	ENSG00000259633	7589	None	None
L1FLnI_15q25.2p	L1	L1	L1FLnI	chr15	84377657	84387103	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC243562.2	ENSG00000259683	2626	UBE2Q2P8	ENSG00000259633	121643	None	None
L1FLnI_15q25.3a	L1	L1	L1FLnI	chr15	85051331	85060987	-	noncoding	PDE8A	protein_coding	ANTISENSE	ENSG00000073417	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.3b	L1	L1	L1FLnI	chr15	85430465	85440476	+	coding	AKAP13	protein_coding	SENSE	ENSG00000170776	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr15:85433140-85433144
L1FLnI_15q25.3c	L1	L1	L1FLnI	chr15	85430465	85440465	+	coding	AKAP13	protein_coding	SENSE	ENSG00000170776	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr15:85433140-85433144
L1FLnI_15q25.3d	L1	L1	L1FLnI	chr15	85446879	85458130	-	noncoding	AKAP13	protein_coding	ANTISENSE	ENSG00000170776	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.3e	L1	L1	L1FLnI	chr15	86205333	86215477	-	noncoding	AGBL1	protein_coding	ANTISENSE	ENSG00000273540	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.3f	L1	L1	L1FLnI	chr15	86357382	86365960	-	noncoding	AGBL1	protein_coding	ANTISENSE	ENSG00000273540	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.3g	L1	L1	L1FLnI	chr15	86415660	86426046	+	noncoding	AGBL1	protein_coding	SENSE	ENSG00000273540	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.3h	L1	L1	L1FLnI	chr15	86470593	86480846	+	coding	AGBL1	protein_coding	SENSE	ENSG00000273540	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.3i	L1	L1	L1FLnI	chr15	86500012	86510008	-	noncoding	AGBL1	protein_coding	ANTISENSE	ENSG00000273540	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.3j	L1	L1	L1FLnI	chr15	86524596	86534625	+	coding	AGBL1	protein_coding	SENSE	ENSG00000273540	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.3k	L1	L1	L1FLnI	chr15	86559646	86569767	-	coding	AGBL1	protein_coding	ANTISENSE	ENSG00000273540	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.3l	L1	L1	L1FLnI	chr15	86692113	86701422	-	coding	AGBL1	protein_coding	ANTISENSE	ENSG00000273540	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.3m	L1	L1	L1FLnI	chr15	87000809	87010316	-	coding	AGBL1	protein_coding	ANTISENSE	ENSG00000273540	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.3n	L1	L1	L1FLnI	chr15	87013045	87022217	+	noncoding	AGBL1	protein_coding	SENSE	ENSG00000273540	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.3o	L1	L1	L1FLnI	chr15	87018426	87027644	+	noncoding	AGBL1	protein_coding	SENSE	ENSG00000273540	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.3p	L1	L1	L1FLnI	chr15	87100408	87109563	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC078905.1	ENSG00000259761	53105	AC020687.1	ENSG00000259560	216266	None	None
L1FLnI_15q25.3q	L1	L1	L1FLnI	chr15	87229295	87239395	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC020687.1	ENSG00000259560	86434	AC078905.1	ENSG00000259761	181992	None	None
L1FLnI_15q25.3r	L1	L1	L1FLnI	chr15	87249265	87259374	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC020687.1	ENSG00000259560	66455	AC078905.1	ENSG00000259761	201962	None	None
L1FLnI_15q25.3s	L1	L1	L1FLnI	chr15	87256279	87266206	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC020687.1	ENSG00000259560	59623	AC078905.1	ENSG00000259761	208976	None	None
L1FLnI_15q25.3t	L1	L1	L1FLnI	chr15	87256286	87266206	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC020687.1	ENSG00000259560	59623	AC078905.1	ENSG00000259761	208983	None	None
L1FLnI_15q25.3u	L1	L1	L1FLnI	chr15	87274826	87284969	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC020687.1	ENSG00000259560	40860	AC078905.1	ENSG00000259761	227523	None	None
L1FLnI_15q25.3v	L1	L1	L1FLnI	chr15	87326891	87336916	-	coding	AC020687.1	lncRNA	SENSE	ENSG00000259560	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.3w	L1	L1	L1FLnI	chr15	87373730	87383895	+	coding	AC020687.1	lncRNA	ANTISENSE	ENSG00000259560	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.3x	L1	L1	L1FLnI	chr15	87460240	87470249	+	coding	AC020687.1	lncRNA	ANTISENSE	ENSG00000259560	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_15q25.3	L1	L1	L1FLI	chr15	87508888	87516934	+	coding	AC020687.1	lncRNA	ANTISENSE	ENSG00000259560	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q25.3y	L1	L1	L1FLnI	chr15	88353568	88363701	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NTRK3-AS1	ENSG00000260305	82502	MRPL46	ENSG00000259494	95776	None	None
L1FLnI_15q26.1a	L1	L1	L1FLnI	chr15	88554100	88563763	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC013489.2	ENSG00000259569	4524	DET1	ENSG00000140543	7425	None	None
L1FLnI_15q26.1b	L1	L1	L1FLnI	chr15	89043405	89053407	-	coding	AC013565.1	lncRNA	ANTISENSE	ENSG00000260123	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr15:89051949-89052198	None
L1FLnI_15q26.1c	L1	L1	L1FLnI	chr15	89630820	89640801	+	noncoding	TICRR,KIF7	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000140534,ENSG00000166813	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr15:89632599-89632601
L1FLnI_15q26.1d	L1	L1	L1FLnI	chr15	91175390	91184984	-	coding	SV2B	protein_coding	ANTISENSE	ENSG00000185518	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q26.1e	L1	L1	L1FLnI	chr15	91450037	91460556	-	noncoding	AC104035.1	lncRNA	ANTISENSE	ENSG00000258551	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q26.1f	L1	L1	L1FLnI	chr15	91497167	91507149	+	coding	AC104035.1	lncRNA	SENSE	ENSG00000258551	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q26.1g	L1	L1	L1FLnI	chr15	92751741	92761279	+	noncoding	FAM174B	protein_coding	ANTISENSE	ENSG00000185442	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q26.1h	L1	L1	L1FLnI	chr15	93389479	93399593	-	coding	AC091078.1	lncRNA	ANTISENSE	ENSG00000257060	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_15q26.1	L1	L1	L1FLI	chr15	93674399	93682446	+	coding	AC110023.1	lncRNA	SENSE	ENSG00000258631	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q26.1i	L1	L1	L1FLnI	chr15	93743019	93753328	+	noncoding	AC110023.1,LINC01579	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000258631,ENSG00000258754	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q26.1j	L1	L1	L1FLnI	chr15	93788721	93798882	+	coding	LINC01579	lncRNA	ANTISENSE	ENSG00000258754	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q26.2a	L1	L1	L1FLnI	chr15	93809228	93819822	+	noncoding	LINC01579	lncRNA	ANTISENSE	ENSG00000258754	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q26.2b	L1	L1	L1FLnI	chr15	94147468	94156099	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	H3P40	ENSG00000258570	12250	LINC01581	ENSG00000259724	39530	None	None
L1FLnI_15q26.2c	L1	L1	L1FLnI	chr15	94278386	94287293	-	coding	MCTP2	protein_coding	ANTISENSE	ENSG00000140563	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q26.2d	L1	L1	L1FLnI	chr15	94503461	94512000	+	noncoding	AC009432.2	lncRNA	ANTISENSE	ENSG00000287950	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr15:94506933-94507239	None
L1FLnI_15q26.2e	L1	L1	L1FLnI	chr15	94848420	94858438	-	coding	AC087633.2,AC107976.1	transcribed_processed_pseudogene,lncRNA	ANTISENSE,SENSE	ENSG00000277654,ENSG00000270017	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr15:94855549-94855563,chr15:94855841-94855865,chr15:94855876-94855900
L1FLnI_15q26.2f	L1	L1	L1FLnI	chr15	97104204	97112944	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP181	ENSG00000223120	261820	LINC02253	ENSG00000259485	102868	None	None
L1FLnI_15q26.2g	L1	L1	L1FLnI	chr15	97265082	97275104	-	coding	LINC02253,AC020704.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000259485,ENSG00000259403	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q26.2h	L1	L1	L1FLnI	chr15	97289672	97299813	-	coding	LINC02253,AC020704.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000259485,ENSG00000259403	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr15:97296256-97296264,chr15:97296289-97296312
L1FLnI_15q26.2i	L1	L1	L1FLnI	chr15	97295819	97305791	-	noncoding	LINC02253,AC020704.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000259485,ENSG00000259403	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr15:97296256-97296264,chr15:97296289-97296312
L1FLnI_15q26.2j	L1	L1	L1FLnI	chr15	97371989	97381157	-	coding	LINC02253,LINC02254	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000259485,ENSG00000259664	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q26.2k	L1	L1	L1FLnI	chr15	97412825	97422973	-	coding	LINC02253,LINC02254	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000259485,ENSG00000259664	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q26.2l	L1	L1	L1FLnI	chr15	97429195	97439349	+	coding	LINC02253,LINC02254	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000259485,ENSG00000259664	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr15:97429203-97429206
L1FLnI_15q26.2m	L1	L1	L1FLnI	chr15	97604633	97613474	+	noncoding	LINC00923	lncRNA	ANTISENSE	ENSG00000251209	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q26.3a	L1	L1	L1FLnI	chr15	98088041	98098064	+	coding	AC022523.1,LINC01582	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000259199,ENSG00000259611	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q26.3b	L1	L1	L1FLnI	chr15	98244046	98252630	-	noncoding	AC022523.1	lncRNA	SENSE	ENSG00000259199	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q26.3c	L1	L1	L1FLnI	chr15	98454756	98464144	+	noncoding	FAM169B	protein_coding	ANTISENSE	ENSG00000283597	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q26.3d	L1	L1	L1FLnI	chr15	99376050	99385879	-	coding	LRRC28	protein_coding	ANTISENSE	ENSG00000168904	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr15:99376679-99376688
L1FLnI_15q26.3e	L1	L1	L1FLnI	chr15	99827463	99836981	-	coding	AC090825.1	lncRNA	ANTISENSE	ENSG00000259363	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q26.3f	L1	L1	L1FLnI	chr15	100011190	100021301	-	noncoding	ADAMTS17	protein_coding	SENSE	ENSG00000140470	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q26.3g	L1	L1	L1FLnI	chr15	100064273	100074422	+	coding	ADAMTS17,RNA5SP402	protein_coding,rRNA_pseudogene	ANTISENSE,ANTISENSE	ENSG00000140470,ENSG00000252957	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q26.3h	L1	L1	L1FLnI	chr15	100080365	100090498	+	coding	ADAMTS17	protein_coding	ANTISENSE	ENSG00000140470	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q26.3i	L1	L1	L1FLnI	chr15	100283706	100292450	+	noncoding	ADAMTS17	protein_coding	ANTISENSE	ENSG00000140470	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q26.3j	L1	L1	L1FLnI	chr15	100361768	100371801	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SPATA41	ENSG00000189419	11043	CERS3-AS1	ENSG00000259430	1135	None	None
L1FLnI_15q26.3k	L1	L1	L1FLnI	chr15	100413573	100423596	+	coding	CERS3-AS1,CERS3	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000259430,ENSG00000154227	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_15q26.3l	L1	L1	L1FLnI	chr15	100673084	100683196	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC087762.1	ENSG00000259579	33053	ASB7	ENSG00000183475	21379	None	None
L1FLnI_15q26.3m	L1	L1	L1FLnI	chr15	101622952	101632975	+	coding	TM2D3	protein_coding	ANTISENSE	ENSG00000184277	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr15:101625181-101625213
L1FLnI_15q26.3n	L1	L1	L1FLnI	chr15	101879779	101890193	-	noncoding	WBP1LP5	processed_pseudogene	SENSE	ENSG00000259454	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16p13.3	L1	L1	L1FLnI	chr16	5744454	5754498	-	coding	RBFOX1	protein_coding	ANTISENSE	ENSG00000078328	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_16p13.2	L1	L1	L1FLI	chr16	9583478	9591524	-	coding	AC007221.1	lncRNA	ANTISENSE	ENSG00000283003	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16p13.2	L1	L1	L1FLnI	chr16	10286222	10296352	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ATF7IP2	ENSG00000166669	30082	AC022168.1	ENSG00000285543	58641	None	None
L1FLnI_16p13.13	L1	L1	L1FLnI	chr16	12069685	12079803	-	coding	SNX29	protein_coding	ANTISENSE	ENSG00000048471	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16p13.12a	L1	L1	L1FLnI	chr16	12588274	12598008	+	noncoding	AC010333.2	lncRNA	ANTISENSE	ENSG00000259899	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr16:12591013-12591019
L1FLnI_16p13.12b	L1	L1	L1FLnI	chr16	12600314	12610264	+	noncoding	AC010333.2	lncRNA	ANTISENSE	ENSG00000259899	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr16:12606857-12606932	chr16:12606857-12606866
L1FLnI_16p13.12c	L1	L1	L1FLnI	chr16	13086352	13096455	-	noncoding	SHISA9	protein_coding	ANTISENSE	ENSG00000237515	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16p13.12d	L1	L1	L1FLnI	chr16	13964755	13974368	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02185	ENSG00000262097	26952	AC010401.2	ENSG00000263234	9930	None	None
L1FLnI_16p12.3a	L1	L1	L1FLnI	chr16	16744542	16754682	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092326.1	ENSG00000279729	6223	AC136431.1	ENSG00000260126	80407	None	None
L1FLnI_16p12.3b	L1	L1	L1FLnI	chr16	16768515	16778344	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC098965.1	ENSG00000261748	174158	AC092326.1	ENSG00000279729	6050	None	None
L1FLI_16p12.3a	L1	L1	L1FLI	chr16	16839524	16847570	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC098965.1	ENSG00000261748	104932	AC092326.1	ENSG00000279729	77059	None	None
L1FLnI_16p12.3c	L1	L1	L1FLnI	chr16	17003749	17013291	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC109446.4	ENSG00000279490	69004	AC098965.1	ENSG00000261748	50281	None	None
L1FLnI_16p12.3d	L1	L1	L1FLnI	chr16	17729667	17739800	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC109495.1	ENSG00000260945	188682	AC025277.1	ENSG00000261555	85452	None	chr16:17730880-17730886
L1FLnI_16p12.3e	L1	L1	L1FLnI	chr16	17902927	17913064	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC025277.1	ENSG00000261555	76021	RPL7P47	ENSG00000228071	19656	None	None
L1FLnI_16p12.3f	L1	L1	L1FLnI	chr16	17902927	17913093	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC025277.1	ENSG00000261555	76021	RPL7P47	ENSG00000228071	19627	None	None
L1FLnI_16p12.3g	L1	L1	L1FLnI	chr16	18604552	18614693	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ABCC6P1	ENSG00000256340	6224	RPS15A	ENSG00000134419	166602	None	None
L1FLI_16p12.3b	L1	L1	L1FLI	chr16	18820241	18828286	-	coding	SMG1	protein_coding	SENSE	ENSG00000157106	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16p12.3h	L1	L1	L1FLnI	chr16	20567720	20576836	-	noncoding	ACSM2B	protein_coding	SENSE	ENSG00000066813	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr16:20576343-20576368
L1FLI_16p12.3c	L1	L1	L1FLI	chr16	21041662	21049705	-	coding	DNAH3	protein_coding	SENSE	ENSG00000158486	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16p12.2a	L1	L1	L1FLnI	chr16	21328538	21338676	-	coding	CRYM-AS1	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000189149	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16p12.2b	L1	L1	L1FLnI	chr16	23090375	23100022	+	noncoding	USP31	protein_coding	ANTISENSE	ENSG00000103404	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16p12.1a	L1	L1	L1FLnI	chr16	25482666	25493217	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HS3ST4	ENSG00000182601	198742	CYCSP39	ENSG00000260690	28019	None	None
L1FLnI_16p12.1b	L1	L1	L1FLnI	chr16	25552341	25562792	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYCSP39	ENSG00000260690	97694	HS3ST4	ENSG00000182601	129167	chr16:25553018-25553034,chr16:25553709-25554005	None
L1FLnI_16p12.1c	L1	L1	L1FLnI	chr16	26089119	26099245	+	coding	HS3ST4	protein_coding	SENSE	ENSG00000182601	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16p12.1d	L1	L1	L1FLnI	chr16	26415750	26425893	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC130464.1	ENSG00000228480	57395	AC002331.1	ENSG00000286712	120909	None	None
L1FLnI_16p11.2a	L1	L1	L1FLnI	chr16	31278239	31288353	-	coding	ITGAM	protein_coding	ANTISENSE	ENSG00000169896	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16p11.2b	L1	L1	L1FLnI	chr16	31334371	31344538	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ITGAM	ENSG00000169896	1479	ITGAX	ENSG00000140678	10596	None	None
L1FLnI_16p11.2c	L1	L1	L1FLnI	chr16	31567118	31575696	+	coding	FRG2KP,YBX3P1	transcribed_unprocessed_pseudogene,processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000261741,ENSG00000261614	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr16:31569241-31569254,chr16:31569708-31569716,chr16:31569144-31569160
L1FLnI_16p11.2d	L1	L1	L1FLnI	chr16	31582531	31592904	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF720P1	ENSG00000260010	8689	YBX3P1	ENSG00000261614	13056	None	None
L1FLnI_16p11.2e	L1	L1	L1FLnI	chr16	31629379	31639518	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	VN1R66P	ENSG00000237185	8789	ZNF720P1	ENSG00000260010	25848	None	None
L1FLnI_16p11.2f	L1	L1	L1FLnI	chr16	31683723	31693824	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RBM22P12	ENSG00000260631	1622	AC074050.1	ENSG00000260472	3573	None	None
L1FLnI_16p11.2g	L1	L1	L1FLnI	chr16	31741675	31750483	-	noncoding	ZNF720	protein_coding	ANTISENSE	ENSG00000197302	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16p11.2h	L1	L1	L1FLnI	chr16	31767931	31776832	+	noncoding	ZNF720	protein_coding	SENSE	ENSG00000197302	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16p11.2i	L1	L1	L1FLnI	chr16	31783982	31792564	-	noncoding	ZNF720,AC002519.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000197302,ENSG00000259810	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16p11.2j	L1	L1	L1FLnI	chr16	31821942	31831094	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	VN1R3	ENSG00000180663	13098	RBM22P13	ENSG00000261284	32539	None	None
L1FLnI_16p11.2k	L1	L1	L1FLnI	chr16	31900303	31910425	-	coding	ZNF267	protein_coding	ANTISENSE	ENSG00000185947	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr16:31909145-31909148
L1FLnI_16p11.2l	L1	L1	L1FLnI	chr16	31908934	31917639	-	noncoding	ZNF267	protein_coding	ANTISENSE	ENSG00000185947	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr16:31909145-31909148,chr16:31914840-31914854,chr16:31915312-31915333,chr16:31917407-31917412
L1FLnI_16p11.2m	L1	L1	L1FLnI	chr16	31934059	31944205	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF267	ENSG00000185947	16702	AC034105.5	ENSG00000261289	7955	chr16:31943986-31944281	None
L1FLnI_16p11.2n	L1	L1	L1FLnI	chr16	31934059	31944226	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF267	ENSG00000185947	16702	AC034105.5	ENSG00000261289	7934	chr16:31943986-31944281	None
L1FLnI_16p11.2o	L1	L1	L1FLnI	chr16	32411296	32421437	-	noncoding	AC138915.2	unprocessed_pseudogene	ANTISENSE	ENSG00000260866	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16p11.2p	L1	L1	L1FLnI	chr16	32837091	32846330	-	coding	AC142086.2	processed_pseudogene	SENSE	ENSG00000259934	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16p11.2q	L1	L1	L1FLnI	chr16	33645864	33655340	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC142384.1	ENSG00000259882	23317	BMS1P8	ENSG00000260518	31685	None	None
L1FLI_16p11.2	L1	L1	L1FLI	chr16	33951565	33959614	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC140658.1	ENSG00000205452	4933	IGHV3OR16-16	ENSG00000259842	1145	None	None
L1FLnI_16p11.2r	L1	L1	L1FLnI	chr16	34015175	34025092	+	coding	AC133561.4	processed_pseudogene	SENSE	ENSG00000283065	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16p11.2s	L1	L1	L1FLnI	chr16	34213826	34222373	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	BCLAF1P2	ENSG00000279800	43668	RNA5-8SP2	ENSG00000200434	50716	None	chr16:34220236-34220250
L1FLnI_16p11.2t	L1	L1	L1FLnI	chr16	35071417	35081418	+	noncoding	CCNYL3,CLUHP11	unprocessed_pseudogene,unprocessed_pseudogene	SENSE,SENSE	ENSG00000216671,ENSG00000278138	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16p11.2u	L1	L1	L1FLnI	chr16	35156657	35166672	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023824.6	ENSG00000280180	2291	UBE2MP1	ENSG00000261461	3020	None	None
L1FLnI_16p11.2v	L1	L1	L1FLnI	chr16	35156657	35166679	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC023824.6	ENSG00000280180	2291	UBE2MP1	ENSG00000261461	3013	None	None
L1FLnI_16p11.2w	L1	L1	L1FLnI	chr16	35224928	35235269	-	coding	AC023824.3,FGFR3P5	lncRNA,unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000260958,ENSG00000260984	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16p11.2x	L1	L1	L1FLnI	chr16	35283688	35293830	+	noncoding	AC023824.3	lncRNA	SENSE	ENSG00000260958	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16p11.1a	L1	L1	L1FLnI	chr16	35465198	35475193	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC018558.6	ENSG00000287163	12211	FRG2DP	ENSG00000261711	2221	None	None
L1FLnI_16p11.1b	L1	L1	L1FLnI	chr16	35607977	35618001	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	KIF18BP1	ENSG00000260746	18686	C1QL1P1	ENSG00000260134	32483	None	None
L1FLnI_16p11.1c	L1	L1	L1FLnI	chr16	35660257	35669471	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KIF18BP1	ENSG00000260746	15077	AC106785.1	ENSG00000260522	52797	None	None
L1FLnI_16p11.1d	L1	L1	L1FLnI	chr16	35660257	35669437	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KIF18BP1	ENSG00000260746	15077	AC106785.1	ENSG00000260522	52831	None	None
L1FLnI_16p11.1e	L1	L1	L1FLnI	chr16	35715298	35725463	-	noncoding	AC106785.1	processed_pseudogene	SENSE	ENSG00000260522	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr16:35722356-35722562	None
L1FLnI_16p11.1f	L1	L1	L1FLnI	chr16	35827238	35836320	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	VN1R70P	ENSG00000261515	566	HMGN2P41	ENSG00000261620	23958	None	None
L1FLnI_16p11.1g	L1	L1	L1FLnI	chr16	35940206	35950347	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PPP1R1AP2	ENSG00000261084	27690	ANKRD26P1	ENSG00000261239	10518994	None	None
L1FLnI_16p11.1h	L1	L1	L1FLnI	chr16	36068424	36078450	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PPP1R1AP2	ENSG00000261084	155908	ANKRD26P1	ENSG00000261239	10390891	None	None
L1FLnI_16p11.1i	L1	L1	L1FLnI	chr16	36091411	36101558	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ANKRD26P1	ENSG00000261239	10367783	PPP1R1AP2	ENSG00000261084	178895	None	None
L1FLnI_16p11.1j	L1	L1	L1FLnI	chr16	36091424	36101558	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ANKRD26P1	ENSG00000261239	10367783	PPP1R1AP2	ENSG00000261084	178908	None	None
L1FLnI_16q11.2a	L1	L1	L1FLnI	chr16	46448913	46458927	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ANKRD26P1	ENSG00000261239	10414	PPP1R1AP2	ENSG00000261084	10536397	None	None
L1FLnI_16q11.2b	L1	L1	L1FLnI	chr16	46486362	46496502	+	noncoding	ANKRD26P1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000261239	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q11.2c	L1	L1	L1FLnI	chr16	46531849	46542008	+	coding	ANKRD26P1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000261239	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q11.2d	L1	L1	L1FLnI	chr16	46531849	46542037	+	coding	ANKRD26P1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000261239	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q12.1a	L1	L1	L1FLnI	chr16	47179259	47189283	+	coding	ITFG1	protein_coding	ANTISENSE	ENSG00000129636	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q12.1b	L1	L1	L1FLnI	chr16	47343561	47353718	+	coding	ITFG1	protein_coding	ANTISENSE	ENSG00000129636	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q12.1c	L1	L1	L1FLnI	chr16	47434212	47444407	+	coding	ITFG1	protein_coding	ANTISENSE	ENSG00000129636	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q12.1d	L1	L1	L1FLnI	chr16	47540509	47550743	-	coding	PHKB	protein_coding	ANTISENSE	ENSG00000102893	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q12.1e	L1	L1	L1FLnI	chr16	47677272	47687412	-	coding	PHKB	protein_coding	ANTISENSE	ENSG00000102893	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q12.1f	L1	L1	L1FLnI	chr16	47807477	47817606	-	coding	LINC02133	lncRNA	ANTISENSE	ENSG00000261231	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q12.1g	L1	L1	L1FLnI	chr16	47906399	47916504	+	noncoding	LINC02133	lncRNA	SENSE	ENSG00000261231	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q12.1h	L1	L1	L1FLnI	chr16	48014967	48024989	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC096996.3	ENSG00000288026	25599	LINC02134	ENSG00000260450	43274	None	None
L1FLnI_16q12.1i	L1	L1	L1FLnI	chr16	48755192	48765371	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007611.1	ENSG00000260086	8874	AC023827.1	ENSG00000260184	84548	None	None
L1FLnI_16q12.1j	L1	L1	L1FLnI	chr16	48768073	48778103	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC023827.1	ENSG00000260184	71816	AC007611.1	ENSG00000260086	21755	None	None
L1FLnI_16q12.1k	L1	L1	L1FLnI	chr16	49025186	49035345	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC023827.1	ENSG00000260184	175171	MTND4LP25	ENSG00000260067	31222	None	None
L1FLnI_16q12.1l	L1	L1	L1FLnI	chr16	49224605	49234738	+	coding	AC044798.3	lncRNA	ANTISENSE	ENSG00000287469	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q12.1m	L1	L1	L1FLnI	chr16	49604969	49613910	+	noncoding	ZNF423	protein_coding	ANTISENSE	ENSG00000102935	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q12.1n	L1	L1	L1FLnI	chr16	50339841	50349910	+	coding	BRD7	protein_coding	ANTISENSE	ENSG00000166164	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr16:50342171-50342478	None
L1FLnI_16q12.1o	L1	L1	L1FLnI	chr16	51248407	51258551	-	coding	AC087564.1,AC137494.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000285367,ENSG00000287256	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q12.1p	L1	L1	L1FLnI	chr16	51326311	51336454	+	coding	AC087564.1	lncRNA	SENSE	ENSG00000285367	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q12.1q	L1	L1	L1FLnI	chr16	51513139	51523427	+	coding	AC007344.1	lncRNA	ANTISENSE	ENSG00000260850	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q12.1r	L1	L1	L1FLnI	chr16	51513139	51523409	+	coding	AC007344.1	lncRNA	ANTISENSE	ENSG00000260850	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q12.1s	L1	L1	L1FLnI	chr16	52007094	52017261	-	noncoding	C16orf97	lncRNA	SENSE	ENSG00000261190	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q12.1t	L1	L1	L1FLnI	chr16	52156099	52165409	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007333.2	ENSG00000260975	32603	LINC02180	ENSG00000261749	56979	None	None
L1FLnI_16q12.1u	L1	L1	L1FLnI	chr16	52329911	52340034	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CASC22	ENSG00000260887	49273	TOX3	ENSG00000103460	96383	None	None
L1FLnI_16q12.2a	L1	L1	L1FLnI	chr16	53343922	53354017	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007342.2	ENSG00000259962	8002	RNA5SP427	ENSG00000202193	6351	None	None
L1FLnI_16q12.2b	L1	L1	L1FLnI	chr16	53343933	53354017	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007342.2	ENSG00000259962	8002	RNA5SP427	ENSG00000202193	6362	None	None
L1FLnI_16q12.2c	L1	L1	L1FLnI	chr16	53393418	53403416	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC007342.9	ENSG00000280027	945	RBL2	ENSG00000103479	30561	None	None
L1FLnI_16q12.2d	L1	L1	L1FLnI	chr16	54038598	54048624	+	coding	FTO,AC007347.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000140718,ENSG00000261049	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q12.2e	L1	L1	L1FLnI	chr16	55595299	55605312	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LPCAT2	ENSG00000087253	8633	SLC6A2	ENSG00000103546	50292	None	None
L1FLnI_16q12.2f	L1	L1	L1FLnI	chr16	55611953	55620729	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LPCAT2	ENSG00000087253	25287	SLC6A2	ENSG00000103546	34875	None	None
L1FLnI_16q12.2g	L1	L1	L1FLnI	chr16	55916472	55926281	+	noncoding	CES5A	protein_coding	ANTISENSE	ENSG00000159398	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q13	L1	L1	L1FLnI	chr16	56151016	56161162	+	coding	AC040168.1	lncRNA	ANTISENSE	ENSG00000246379	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr16:56160730-56160786	None
L1FLnI_16q21a	L1	L1	L1FLnI	chr16	58779389	58789496	-	coding	AC106793.1	lncRNA	ANTISENSE	ENSG00000245768	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q21b	L1	L1	L1FLnI	chr16	58872644	58882766	-	coding	AC106793.1,AC092378.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000245768,ENSG00000261638	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q21c	L1	L1	L1FLnI	chr16	58977012	58987031	-	coding	AC106793.1	lncRNA	ANTISENSE	ENSG00000245768	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q21d	L1	L1	L1FLnI	chr16	59068760	59078903	+	coding	AC106793.1	lncRNA	SENSE	ENSG00000245768	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q21e	L1	L1	L1FLnI	chr16	59092921	59103046	+	coding	AC106793.1	lncRNA	SENSE	ENSG00000245768	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q21f	L1	L1	L1FLnI	chr16	59226177	59234724	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC106793.1	ENSG00000245768	26782	RNU4-58P	ENSG00000200062	305402	None	None
L1FLnI_16q21g	L1	L1	L1FLnI	chr16	59277919	59286677	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC106793.1	ENSG00000245768	78524	RNU4-58P	ENSG00000200062	253449	None	None
L1FLnI_16q21h	L1	L1	L1FLnI	chr16	59558765	59567300	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DUXAP11	ENSG00000270222	88302	RNU4-58P	ENSG00000200062	18499	None	None
L1FLnI_16q21i	L1	L1	L1FLnI	chr16	59558796	59567300	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DUXAP11	ENSG00000270222	88302	RNU4-58P	ENSG00000200062	18530	None	None
L1FLnI_16q21j	L1	L1	L1FLnI	chr16	59805819	59816004	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	APOOP5	ENSG00000260240	50793	LINC02141	ENSG00000261807	39349	chr16:59807466-59807470	None
L1FLnI_16q21k	L1	L1	L1FLnI	chr16	59830207	59840349	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02141	ENSG00000261807	15004	APOOP5	ENSG00000260240	75181	None	None
L1FLnI_16q21l	L1	L1	L1FLnI	chr16	59973103	59983119	+	coding	LINC02141	lncRNA	SENSE	ENSG00000261807	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q21m	L1	L1	L1FLnI	chr16	60133109	60143901	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009081.2	ENSG00000261436	202577	LINC02141	ENSG00000261807	79136	None	None
L1FLnI_16q21n	L1	L1	L1FLnI	chr16	60519247	60529271	+	coding	AC009081.1	lncRNA	ANTISENSE	ENSG00000261310	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q21o	L1	L1	L1FLnI	chr16	60519247	60529290	+	coding	AC009081.1	lncRNA	ANTISENSE	ENSG00000261310	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q21p	L1	L1	L1FLnI	chr16	60532816	60543228	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GNPATP	ENSG00000259844	111007	AC009081.1	ENSG00000261310	9566	None	None
L1FLnI_16q21q	L1	L1	L1FLnI	chr16	60932473	60941664	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC009169.1	ENSG00000261178	3932	RPS27AP16	ENSG00000224631	113735	None	None
L1FLnI_16q21r	L1	L1	L1FLnI	chr16	61086968	61097345	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS27AP16	ENSG00000224631	31004	AC092125.2	ENSG00000286653	540888	None	None
L1FLnI_16q21s	L1	L1	L1FLnI	chr16	61571792	61580541	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092125.2	ENSG00000286653	57692	RPS27AP16	ENSG00000224631	515828	None	None
L1FLnI_16q21t	L1	L1	L1FLnI	chr16	61778580	61788601	+	coding	CDH8	protein_coding	ANTISENSE	ENSG00000150394	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q21u	L1	L1	L1FLnI	chr16	61797957	61807989	+	coding	CDH8	protein_coding	ANTISENSE	ENSG00000150394	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q21v	L1	L1	L1FLnI	chr16	62163245	62172114	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-21P	ENSG00000207441	15426	CDH8	ENSG00000150394	126210	None	None
L1FLnI_16q21w	L1	L1	L1FLnI	chr16	62207954	62218458	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009161.2	ENSG00000280261	123962	RNU6-21P	ENSG00000207441	20308	None	None
L1FLnI_16q21x	L1	L1	L1FLnI	chr16	62466626	62476182	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009110.1	ENSG00000231589	120190	AC009161.1	ENSG00000237901	108880	None	None
L1FLnI_16q21y	L1	L1	L1FLnI	chr16	62991870	63001992	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC040174.1	ENSG00000261502	54794	AC010546.1	ENSG00000260332	183164	None	None
L1FLnI_16q21z	L1	L1	L1FLnI	chr16	63116453	63126475	+	coding	AC040174.1	lncRNA	ANTISENSE	ENSG00000261502	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q21aa	L1	L1	L1FLnI	chr16	63144237	63153786	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC040174.1	ENSG00000261502	14583	UBE2FP2	ENSG00000261199	26824	None	None
L1FLI_16q21	L1	L1	L1FLI	chr16	63387073	63395120	+	coding	AC138305.1	lncRNA	ANTISENSE	ENSG00000260658	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q21ba	L1	L1	L1FLnI	chr16	63735013	63743995	+	noncoding	LINC02165	lncRNA	SENSE	ENSG00000261014	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q21ca	L1	L1	L1FLnI	chr16	64501228	64511830	-	noncoding	AC092131.1	lncRNA	ANTISENSE	ENSG00000259846	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q21da	L1	L1	L1FLnI	chr16	64501228	64511071	-	noncoding	AC092131.1	lncRNA	ANTISENSE	ENSG00000259846	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q21ea	L1	L1	L1FLnI	chr16	64618851	64629569	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP48	ENSG00000260187	106356	AC092131.1	ENSG00000259846	18604	None	None
L1FLnI_16q21fa	L1	L1	L1FLnI	chr16	65353245	65363238	+	coding	AC009055.1,LINC00922	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000260364,ENSG00000261742	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q21ga	L1	L1	L1FLnI	chr16	65547629	65557778	+	coding	LINC00922	lncRNA	ANTISENSE	ENSG00000261742	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr16:65547781-65547930	None
L1FLnI_16q21ha	L1	L1	L1FLnI	chr16	65686513	65696520	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092138.2	ENSG00000261818	39566	AC022164.1	ENSG00000260695	164592	None	None
L1FLnI_16q21ia	L1	L1	L1FLnI	chr16	66492484	66502614	+	coding	BEAN1,AC010542.3	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000166546,ENSG00000260851	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr16:66502155-66502495	chr16:66494205-66494212
L1FLnI_16q22.1	L1	L1	L1FLnI	chr16	68582978	68593005	-	coding	AC126773.3,AC126773.6	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000260084,ENSG00000275383	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q22.2a	L1	L1	L1FLnI	chr16	70909591	70920173	-	noncoding	HYDIN	protein_coding	SENSE	ENSG00000157423	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q22.2b	L1	L1	L1FLnI	chr16	70910288	70920173	-	noncoding	HYDIN	protein_coding	SENSE	ENSG00000157423	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q22.2c	L1	L1	L1FLnI	chr16	71201625	71210539	+	noncoding	HYDIN	protein_coding	ANTISENSE	ENSG00000157423	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q22.2d	L1	L1	L1FLnI	chr16	72320894	72330327	+	coding	LINC01572	lncRNA	ANTISENSE	ENSG00000261008	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q22.2e	L1	L1	L1FLnI	chr16	72447945	72457202	-	noncoding	LINC01572,AC004158.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000261008,ENSG00000260664	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q22.2f	L1	L1	L1FLnI	chr16	72539706	72550189	+	noncoding	LINC01572	lncRNA	ANTISENSE	ENSG00000261008	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q22.2g	L1	L1	L1FLnI	chr16	72577300	72587432	+	coding	LINC01572	lncRNA	ANTISENSE	ENSG00000261008	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q22.2h	L1	L1	L1FLnI	chr16	72623776	72633798	+	coding	LINC01572	lncRNA	ANTISENSE	ENSG00000261008	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q22.2i	L1	L1	L1FLnI	chr16	72730174	72740369	-	noncoding	AC004943.2	lncRNA	ANTISENSE	ENSG00000259768	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q22.3	L1	L1	L1FLnI	chr16	73823902	73833931	-	coding	ZFHX3	protein_coding	SENSE	ENSG00000140836	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q23.1a	L1	L1	L1FLnI	chr16	75715626	75725786	+	coding	TERF2IP,CPHXL	protein_coding,protein_coding	SENSE,ANTISENSE	ENSG00000166848,ENSG00000283755	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q23.1b	L1	L1	L1FLnI	chr16	75734333	75744450	-	coding	TERF2IP	protein_coding	ANTISENSE	ENSG00000166848	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q23.1c	L1	L1	L1FLnI	chr16	75821461	75831481	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC105430.1	ENSG00000261313	7095	TERF2IP	ENSG00000166848	59589	None	None
L1FLnI_16q23.1d	L1	L1	L1FLnI	chr16	75827640	75836706	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC105430.1	ENSG00000261313	1870	TERF2IP	ENSG00000166848	65768	None	None
L1FLnI_16q23.1e	L1	L1	L1FLnI	chr16	76050513	76059108	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC099511.1	ENSG00000260223	48175	RNA5SP430	ENSG00000199299	189356	None	None
L1FLnI_16q23.1f	L1	L1	L1FLnI	chr16	76248795	76258969	-	coding	AC010528.1	lncRNA	SENSE	ENSG00000260983	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q23.1g	L1	L1	L1FLnI	chr16	76626547	76636611	-	noncoding	AC106741.2,LINC02125	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000287694,ENSG00000250514	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr16:76635018-76635047
L1FLnI_16q23.1h	L1	L1	L1FLnI	chr16	76839691	76848248	-	noncoding	AC106729.1	lncRNA	ANTISENSE	ENSG00000259995	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q23.1i	L1	L1	L1FLnI	chr16	77263268	77273691	-	noncoding	AC009139.1,ADAMTS18	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000260922,ENSG00000140873	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q23.1j	L1	L1	L1FLnI	chr16	77521477	77531397	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC025284.1	ENSG00000260701	74679	LINC02131	ENSG00000261154	59409	None	None
L1FLnI_16q23.2a	L1	L1	L1FLnI	chr16	79237031	79246715	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092376.1	ENSG00000261722	7578	RNA5SP431	ENSG00000222244	17739	None	None
L1FLnI_16q23.2b	L1	L1	L1FLnI	chr16	79851093	79859875	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092130.1	ENSG00000260237	180787	LINC01228	ENSG00000261082	23943	None	None
L1FLnI_16q23.2c	L1	L1	L1FLnI	chr16	80085564	80095157	-	coding	AC022166.1	lncRNA	ANTISENSE	ENSG00000260706	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q23.2d	L1	L1	L1FLnI	chr16	80135819	80145958	-	noncoding	AC022166.1	lncRNA	ANTISENSE	ENSG00000260706	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q23.2e	L1	L1	L1FLnI	chr16	80216208	80226343	+	coding	AC105411.1	lncRNA	ANTISENSE	ENSG00000259867	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q23.2f	L1	L1	L1FLnI	chr16	80950620	80960015	+	noncoding	AC009070.1	protein_coding	ANTISENSE	ENSG00000286221	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q23.2g	L1	L1	L1FLnI	chr16	81336882	81346249	+	noncoding	GAN	protein_coding	SENSE	ENSG00000261609	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q23.3a	L1	L1	L1FLnI	chr16	82135757	82145758	+	coding	AC092142.1	lncRNA	ANTISENSE	ENSG00000261235	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr16:82139077-82139246	chr16:82139231-82139247
L1FLnI_16q23.3b	L1	L1	L1FLnI	chr16	82203272	82213385	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC009117.1	ENSG00000259873	221443	RN7SKP190	ENSG00000251888	10482	None	None
L1FLnI_16q23.3c	L1	L1	L1FLnI	chr16	82302926	82313364	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC009117.1	ENSG00000259873	121464	RN7SKP190	ENSG00000251888	110136	None	None
L1FLI_16q23.3	L1	L1	L1FLI	chr16	83636250	83644311	+	coding	CDH13	protein_coding	SENSE	ENSG00000140945	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q24.1a	L1	L1	L1FLnI	chr16	86229797	86239810	+	coding	LINC01081	lncRNA	ANTISENSE	ENSG00000268754	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_16q24.1b	L1	L1	L1FLnI	chr16	86258675	86268697	+	coding	LINC01081	lncRNA	ANTISENSE	ENSG00000268754	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr16:86259957-86260089	None
L1FLnI_17p13.3a	L1	L1	L1FLnI	chr17	633898	644038	-	coding	VPS53	protein_coding	SENSE	ENSG00000141252	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17p13.3b	L1	L1	L1FLnI	chr17	3083030	3091931	-	noncoding	OR1D2	protein_coding	SENSE	ENSG00000184166	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17p13.3c	L1	L1	L1FLnI	chr17	3083399	3091931	-	noncoding	OR1D2	protein_coding	SENSE	ENSG00000184166	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17p13.3d	L1	L1	L1FLnI	chr17	3136837	3145662	-	noncoding	AC090282.1	lncRNA	SENSE	ENSG00000261848	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17p13.3e	L1	L1	L1FLnI	chr17	3146868	3156909	-	coding	AC090282.1,OR1P1	lncRNA,polymorphic_pseudogene	SENSE,SENSE	ENSG00000261848,ENSG00000262085	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17p13.3f	L1	L1	L1FLnI	chr17	3173032	3183057	+	coding	AC090282.1	lncRNA	ANTISENSE	ENSG00000261848	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17p13.3g	L1	L1	L1FLnI	chr17	3318874	3328352	-	coding	OR3A2	protein_coding	SENSE	ENSG00000221882	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17p13.3h	L1	L1	L1FLnI	chr17	3326056	3336226	-	coding	OR3A2	protein_coding	SENSE	ENSG00000221882	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17p13.3i	L1	L1	L1FLnI	chr17	3336784	3346891	-	coding	OR3A2	protein_coding	SENSE	ENSG00000221882	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17p13.1a	L1	L1	L1FLnI	chr17	6778313	6787150	+	coding	FBXO39	protein_coding	SENSE	ENSG00000177294	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr17:6786885-6786905
L1FLnI_17p13.1b	L1	L1	L1FLnI	chr17	6801983	6812114	-	coding	TEKT1	protein_coding	SENSE	ENSG00000167858	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17p13.1c	L1	L1	L1FLnI	chr17	6856384	6864960	-	noncoding	ALOX12P2	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000262943	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_17p13.1	L1	L1	L1FLI	chr17	9614985	9623031	+	coding	CFAP52	protein_coding	SENSE	ENSG00000166596	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17p12a	L1	L1	L1FLnI	chr17	11860527	11870672	-	coding	DNAH9	protein_coding	ANTISENSE	ENSG00000007174	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17p12b	L1	L1	L1FLnI	chr17	12146623	12156036	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAP2K4	ENSG00000065559	2793	AC005244.2	ENSG00000265400	45564	None	None
L1FLnI_17p12c	L1	L1	L1FLnI	chr17	12308449	12318318	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084167.1	ENSG00000286617	72420	AC005244.2	ENSG00000265400	93182	None	None
L1FLnI_17p12d	L1	L1	L1FLnI	chr17	12330338	12340909	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC084167.1	ENSG00000286617	49829	AC005244.2	ENSG00000265400	115071	None	None
L1FLnI_17p12e	L1	L1	L1FLnI	chr17	12449405	12459432	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00670	ENSG00000179136	90332	AC084167.1	ENSG00000286617	54228	None	None
L1FLnI_17p12f	L1	L1	L1FLnI	chr17	13851997	13862099	+	coding	COX10-AS1	lncRNA	ANTISENSE	ENSG00000236088	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17p12g	L1	L1	L1FLnI	chr17	14593990	14604454	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022816.1	ENSG00000230647	172518	RPS18P12	ENSG00000230897	100622	None	None
L1FLnI_17p12h	L1	L1	L1FLnI	chr17	14688126	14697255	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS18P12	ENSG00000230897	7821	AC022816.1	ENSG00000230647	266654	None	None
L1FLnI_17p12i	L1	L1	L1FLnI	chr17	15351802	15361306	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TEKT3	ENSG00000125409	10170	AC005703.5	ENSG00000279567	4017	None	None
L1FLnI_17p12j	L1	L1	L1FLnI	chr17	15351802	15361303	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TEKT3	ENSG00000125409	10170	AC005703.5	ENSG00000279567	4020	None	None
L1FLnI_17p11.2	L1	L1	L1FLnI	chr17	22496456	22506562	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC132825.5	ENSG00000283879	12633	AC132825.4	ENSG00000266885	57423	None	None
L1FLnI_17q11.1a	L1	L1	L1FLnI	chr17	26732276	26742356	+	NA	None	NA	NA	None	INTERGENIC	NA	NA	AC131274.3	ENSG00000264970	4025573	AC069061.1	ENSG00000263433	239338	None	None
L1FLnI_17q11.1b	L1	L1	L1FLnI	chr17	26732276	26742369	+	NA	None	NA	NA	None	INTERGENIC	NA	NA	AC131274.3	ENSG00000264970	4025573	AC069061.1	ENSG00000263433	239325	None	None
L1FLnI_17q11.1c	L1	L1	L1FLnI	chr17	27039171	27049123	-	coding	GTF2IP6	unprocessed_pseudogene	SENSE	ENSG00000266736	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q11.1d	L1	L1	L1FLnI	chr17	27098666	27108676	-	coding	AC129926.2	lncRNA	ANTISENSE	ENSG00000285822	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q11.1e	L1	L1	L1FLnI	chr17	27182520	27192580	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC129926.1	ENSG00000265246	45279	AC129926.2	ENSG00000285822	12210	None	None
L1FLnI_17q11.1f	L1	L1	L1FLnI	chr17	27182530	27192580	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC129926.1	ENSG00000265246	45279	AC129926.2	ENSG00000285822	12220	None	None
L1FLnI_17q11.1g	L1	L1	L1FLnI	chr17	27245714	27255852	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC129926.1	ENSG00000265246	4053	RPL34P31	ENSG00000239223	18255	chr17:27246097-27246264	None
L1FLnI_17q11.2a	L1	L1	L1FLnI	chr17	30406316	30416523	-	noncoding	CPD	protein_coding	ANTISENSE	ENSG00000108582	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q11.2b	L1	L1	L1FLnI	chr17	31664415	31674535	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC007923.3	ENSG00000266448	35033	AC007923.4	ENSG00000266877	26872	None	None
L1FLnI_17q11.2c	L1	L1	L1FLnI	chr17	31777488	31787041	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC007923.1	ENSG00000263567	8440	AC004253.2	ENSG00000265046	43690	None	None
L1FLnI_17q11.2d	L1	L1	L1FLnI	chr17	32640442	32649631	-	coding	MYO1D,AC025211.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000176658,ENSG00000264458	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q11.2e	L1	L1	L1FLnI	chr17	32677759	32687772	-	coding	MYO1D,AC025211.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000176658,ENSG00000264458	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q11.2f	L1	L1	L1FLnI	chr17	32883639	32893664	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC084809.1	ENSG00000226377	2569	AC084809.2	ENSG00000236377	11998	None	None
L1FLnI_17q11.2g	L1	L1	L1FLnI	chr17	33058669	33068220	-	coding	ASIC2	protein_coding	SENSE	ENSG00000108684	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q12a	L1	L1	L1FLnI	chr17	33873637	33883749	+	coding	ASIC2,AC024610.2	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000108684,ENSG00000279668	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr17:33874826-33875036	None
L1FLnI_17q12b	L1	L1	L1FLnI	chr17	34026872	34037035	+	coding	ASIC2,AC024610.2,AC004147.4,TLK2P1	protein_coding,lncRNA,lncRNA,processed_pseudogene	ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000108684,ENSG00000279668,ENSG00000265356,ENSG00000226049	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q12c	L1	L1	L1FLnI	chr17	34055490	34066021	+	coding	ASIC2,AC024610.2,AC004147.4	protein_coding,lncRNA,lncRNA	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000108684,ENSG00000279668,ENSG00000265356	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q12d	L1	L1	L1FLnI	chr17	34082523	34092685	-	coding	ASIC2,AC004147.4	protein_coding,lncRNA	SENSE,SENSE	ENSG00000108684,ENSG00000265356	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr17:34082868-34082873
L1FLnI_17q12e	L1	L1	L1FLnI	chr17	34209252	34219465	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CCL2	ENSG00000108691	35753	LINC01989	ENSG00000261156	13315	chr17:34218839-34219194,chr17:34219327-34219686	chr17:34219102-34219105
L1FLnI_17q12f	L1	L1	L1FLnI	chr17	34273909	34283685	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCL7	ENSG00000108688	1667	CCL11	ENSG00000172156	2057	None	None
L1FLnI_17q12g	L1	L1	L1FLnI	chr17	34291952	34301952	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CCL8	ENSG00000108700	17483	CCL11	ENSG00000172156	3618	chr17:34300704-34300969	None
L1FLnI_17q12h	L1	L1	L1FLnI	chr17	35199794	35208457	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC022916.2	ENSG00000266947	22993	SLC35G3	ENSG00000164729	5271	None	None
L1FLnI_17q12i	L1	L1	L1FLnI	chr17	35327410	35337888	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC060766.2	ENSG00000267271	6343	AC022706.1	ENSG00000267364	1961	None	None
L1FLnI_17q12j	L1	L1	L1FLnI	chr17	35390451	35400445	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC060766.3	ENSG00000267315	12773	AC060766.6	ENSG00000267711	433	None	None
L1FLnI_17q12k	L1	L1	L1FLnI	chr17	35520750	35530353	+	coding	SLFN12L,AC015911.11,AC015911.10	protein_coding,lncRNA,transcribed_unprocessed_pseudogene	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000205045,ENSG00000286065,ENSG00000286030	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q21.2a	L1	L1	L1FLnI	chr17	41200369	41210400	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	KRTAP9-12P	ENSG00000248807	2306	KRTAP9-1	ENSG00000240542	9730	None	None
L1FLnI_17q21.2b	L1	L1	L1FLnI	chr17	41236432	41246518	+	noncoding	KRTAP9-8	protein_coding	SENSE	ENSG00000187272	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	chr17:41237998-41238001
L1FLnI_17q21.31	L1	L1	L1FLnI	chr17	43792016	43802108	-	coding	MPP3	protein_coding	SENSE	ENSG00000161647	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q21.33a	L1	L1	L1FLnI	chr17	51301450	51311573	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	UTP18	ENSG00000011260	3514	LINC02071	ENSG00000249383	1036	None	None
L1FLnI_17q21.33b	L1	L1	L1FLnI	chr17	51443179	51453661	+	noncoding	LINC02073	lncRNA	SENSE	ENSG00000267452	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q21.33c	L1	L1	L1FLnI	chr17	51570913	51581313	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02073	ENSG00000267452	49512	CA10	ENSG00000154975	49000	None	None
L1FLnI_17q21.33d	L1	L1	L1FLnI	chr17	51570913	51581297	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02073	ENSG00000267452	49512	CA10	ENSG00000154975	49016	None	None
L1FLnI_17q21.33e	L1	L1	L1FLnI	chr17	51895583	51905115	-	noncoding	CA10	protein_coding	SENSE	ENSG00000154975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr17:51898031-51898312,chr17:51904195-51904204	chr17:51899769-51899798
L1FLnI_17q21.33f	L1	L1	L1FLnI	chr17	51958267	51968353	+	noncoding	CA10	protein_coding	ANTISENSE	ENSG00000154975	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr17:51959461-51959850	None
L1FLnI_17q22a	L1	L1	L1FLnI	chr17	52350778	52360391	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01982	ENSG00000263317	30124	CA10	ENSG00000154975	190761	None	None
L1FLnI_17q22b	L1	L1	L1FLnI	chr17	52403349	52413365	-	coding	LINC01982	lncRNA	ANTISENSE	ENSG00000263317	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q22c	L1	L1	L1FLnI	chr17	53178899	53187869	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC034268.2	ENSG00000285939	88891	MTCO1P40	ENSG00000262902	72541	None	None
L1FLnI_17q22d	L1	L1	L1FLnI	chr17	53178899	53187854	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC034268.2	ENSG00000285939	88906	MTCO1P40	ENSG00000262902	72541	None	None
L1FLnI_17q22e	L1	L1	L1FLnI	chr17	53250320	53259404	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO1P40	ENSG00000262902	143962	AC034268.2	ENSG00000285939	17356	None	None
L1FLnI_17q22f	L1	L1	L1FLnI	chr17	53642503	53652357	-	noncoding	AC034268.2	lncRNA	SENSE	ENSG00000285939	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q22g	L1	L1	L1FLnI	chr17	53849521	53858880	+	coding	AC034268.2	lncRNA	ANTISENSE	ENSG00000285939	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q22h	L1	L1	L1FLnI	chr17	54066950	54077059	-	coding	AC034268.2	lncRNA	SENSE	ENSG00000285939	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q22i	L1	L1	L1FLnI	chr17	54066975	54077059	-	coding	AC034268.2	lncRNA	SENSE	ENSG00000285939	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q22j	L1	L1	L1FLnI	chr17	54082151	54092252	+	noncoding	AC034268.2	lncRNA	ANTISENSE	ENSG00000285939	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q22k	L1	L1	L1FLnI	chr17	54098484	54108460	+	noncoding	AC034268.2	lncRNA	ANTISENSE	ENSG00000285939	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q22l	L1	L1	L1FLnI	chr17	54157625	54166537	+	coding	AC034268.2	lncRNA	ANTISENSE	ENSG00000285939	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q22m	L1	L1	L1FLnI	chr17	54414312	54424865	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC034268.2	ENSG00000285939	48678	ISCA1P3	ENSG00000261965	52931	None	None
L1FLnI_17q22n	L1	L1	L1FLnI	chr17	54414312	54424440	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC034268.2	ENSG00000285939	48678	ISCA1P3	ENSG00000261965	53356	None	None
L1FLnI_17q22o	L1	L1	L1FLnI	chr17	54513358	54522829	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC015943.1	ENSG00000288036	86420	ISCA1P3	ENSG00000261965	35190	None	None
L1FLnI_17q22p	L1	L1	L1FLnI	chr17	54587554	54596732	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC015943.1	ENSG00000288036	12517	ISCA1P3	ENSG00000261965	109386	None	None
L1FLnI_17q22q	L1	L1	L1FLnI	chr17	54635702	54645854	+	coding	AC015943.1	lncRNA	ANTISENSE	ENSG00000288036	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q22r	L1	L1	L1FLnI	chr17	54657068	54667437	-	noncoding	AC015943.1	lncRNA	SENSE	ENSG00000288036	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q22s	L1	L1	L1FLnI	chr17	54724732	54733590	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005951.1	ENSG00000263199	21302	ARL2BPP8	ENSG00000263125	20575	None	None
L1FLnI_17q22t	L1	L1	L1FLnI	chr17	54817158	54827312	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP14	ENSG00000251809	45881	TOM1L1	ENSG00000141198	72075	None	None
L1FLnI_17q22u	L1	L1	L1FLnI	chr17	54817158	54827296	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP14	ENSG00000251809	45881	TOM1L1	ENSG00000141198	72091	None	None
L1FLnI_17q22v	L1	L1	L1FLnI	chr17	55596867	55605386	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM100	ENSG00000166292	114241	AC105021.1	ENSG00000236319	35290	None	None
L1FLnI_17q22w	L1	L1	L1FLnI	chr17	55935201	55945604	+	noncoding	ANKFN1	protein_coding	SENSE	ENSG00000153930	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q22x	L1	L1	L1FLnI	chr17	55935201	55945599	+	noncoding	ANKFN1	protein_coding	SENSE	ENSG00000153930	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q22y	L1	L1	L1FLnI	chr17	55998903	56009119	+	coding	ANKFN1	protein_coding	SENSE	ENSG00000153930	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q22z	L1	L1	L1FLnI	chr17	55998903	56009116	+	coding	ANKFN1	protein_coding	SENSE	ENSG00000153930	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q22aa	L1	L1	L1FLnI	chr17	56376803	56386981	+	coding	ANKFN1	protein_coding	SENSE	ENSG00000153930	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q22ba	L1	L1	L1FLnI	chr17	56398986	56408638	-	noncoding	ANKFN1	protein_coding	ANTISENSE	ENSG00000153930	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q22ca	L1	L1	L1FLnI	chr17	58845772	58855895	-	coding	PPM1E	protein_coding	ANTISENSE	ENSG00000175175	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q23.2a	L1	L1	L1FLnI	chr17	60483194	60491826	-	noncoding	APPBP2	protein_coding	SENSE	ENSG00000062725	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q23.2b	L1	L1	L1FLnI	chr17	60760717	60770830	-	noncoding	BCAS3	protein_coding	ANTISENSE	ENSG00000141376	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q23.2c	L1	L1	L1FLnI	chr17	60880942	60890974	-	coding	BCAS3	protein_coding	ANTISENSE	ENSG00000141376	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q23.2d	L1	L1	L1FLnI	chr17	61106731	61116752	+	coding	BCAS3	protein_coding	SENSE	ENSG00000141376	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q23.2e	L1	L1	L1FLnI	chr17	61106731	61116738	+	coding	BCAS3	protein_coding	SENSE	ENSG00000141376	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q23.2f	L1	L1	L1FLnI	chr17	62353455	62363649	+	noncoding	EFCAB3	protein_coding	SENSE	ENSG00000172421	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q24.1	L1	L1	L1FLnI	chr17	66008734	66018413	-	coding	CEP112	protein_coding	SENSE	ENSG00000154240	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_17q24.2	L1	L1	L1ORF2	chr17	66595567	66603597	-	coding	PRKCA	protein_coding	ANTISENSE	ENSG00000154229	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q24.2a	L1	L1	L1FLnI	chr17	68407625	68417642	-	coding	ARSG,AC007780.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000141337,ENSG00000267009	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q24.2b	L1	L1	L1FLnI	chr17	68998632	69008648	-	coding	ABCA9-AS1,ABCA9	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000231749,ENSG00000154258	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q24.2c	L1	L1	L1FLnI	chr17	68998645	69008648	-	coding	ABCA9-AS1,ABCA9	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000231749,ENSG00000154258	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q24.3a	L1	L1	L1FLnI	chr17	69611445	69621599	-	coding	LINC01483	lncRNA	ANTISENSE	ENSG00000227517	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q24.3b	L1	L1	L1FLnI	chr17	69735055	69743899	-	coding	LINC01483	lncRNA	ANTISENSE	ENSG00000227517	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q24.3c	L1	L1	L1FLnI	chr17	69735055	69743883	-	coding	LINC01483	lncRNA	ANTISENSE	ENSG00000227517	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_17q24.3d	L1	L1	L1FLnI	chr17	70455458	70465487	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC011990.1	ENSG00000267109	86542	AC005771.1	ENSG00000267471	163430	None	None
L1FLnI_17q24.3e	L1	L1	L1FLnI	chr17	70544313	70554295	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC005771.1	ENSG00000267471	74622	AC011990.1	ENSG00000267109	175397	None	None
L1FLnI_17q24.3f	L1	L1	L1FLnI	chr17	70945357	70954203	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007423.1	ENSG00000271239	166127	AC005181.1	ENSG00000271101	57794	chr17:70947788-70947961	chr17:70947804-70947814,chr17:70947816-70947832
L1FLnI_17q24.3g	L1	L1	L1FLnI	chr17	71351461	71361400	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC118653.1	ENSG00000225818	234938	RNU7-155P	ENSG00000238759	53243	None	None
L1FLnI_17q24.3h	L1	L1	L1FLnI	chr17	71640112	71649440	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MYL6P5	ENSG00000228118	18676	AC007432.1	ENSG00000286387	29459	None	chr17:71640873-71640875
L1FLnI_17q24.3i	L1	L1	L1FLnI	chr17	71640534	71649440	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MYL6P5	ENSG00000228118	19098	AC007432.1	ENSG00000286387	29459	None	chr17:71640873-71640875
L1FLnI_18p11.32a	L1	L1	L1FLnI	chr18	32309	42323	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP005530.1	ENSG00000263305	15411	AP001005.1	ENSG00000262181	2711	None	None
L1FLnI_18p11.32b	L1	L1	L1FLnI	chr18	532203	542226	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01925	ENSG00000264265	16909	CETN1	ENSG00000177143	38154	None	None
L1FLnI_18p11.32c	L1	L1	L1FLnI	chr18	970360	980378	-	coding	AP005328.1,AP000829.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000272461,ENSG00000263551	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.32d	L1	L1	L1FLnI	chr18	1028851	1038939	-	coding	AP000829.1	lncRNA	ANTISENSE	ENSG00000263551	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.32e	L1	L1	L1FLnI	chr18	1035489	1045630	+	coding	AP000829.1	lncRNA	SENSE	ENSG00000263551	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.32f	L1	L1	L1FLnI	chr18	1035489	1044269	+	coding	AP000829.1	lncRNA	SENSE	ENSG00000263551	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.32g	L1	L1	L1FLnI	chr18	1083412	1093563	-	noncoding	AP000829.1	lncRNA	ANTISENSE	ENSG00000263551	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.32h	L1	L1	L1FLnI	chr18	1150994	1160293	-	noncoding	AP000829.1,AP005265.1	lncRNA,processed_pseudogene	ANTISENSE,SENSE	ENSG00000263551,ENSG00000263505	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.32i	L1	L1	L1FLnI	chr18	1204234	1214083	-	noncoding	AP000829.1	lncRNA	ANTISENSE	ENSG00000263551	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.32j	L1	L1	L1FLnI	chr18	1204662	1214083	-	noncoding	AP000829.1	lncRNA	ANTISENSE	ENSG00000263551	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.32k	L1	L1	L1FLnI	chr18	1274638	1284925	+	noncoding	AP000829.1,LINC00470	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000263551,ENSG00000132204	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.32l	L1	L1	L1FLnI	chr18	1331719	1341861	+	coding	LINC00470	lncRNA	ANTISENSE	ENSG00000132204	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.32m	L1	L1	L1FLnI	chr18	1447175	1458786	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00470	ENSG00000132204	38831	AP005262.2	ENSG00000266602	50236	None	None
L1FLnI_18p11.32n	L1	L1	L1FLnI	chr18	1515691	1525740	-	coding	AP005262.2	lncRNA	ANTISENSE	ENSG00000266602	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.32o	L1	L1	L1FLnI	chr18	1696476	1706307	+	coding	AP005262.2,AC019183.1	lncRNA,lncRNA	SENSE,SENSE	ENSG00000266602,ENSG00000266450	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.32p	L1	L1	L1FLnI	chr18	2243669	2253696	+	noncoding	AP005230.1	lncRNA	ANTISENSE	ENSG00000263745	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.32q	L1	L1	L1FLnI	chr18	2859739	2869843	-	noncoding	EMILIN2	protein_coding	ANTISENSE	ENSG00000132205	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr18:2868969-2868972
L1FLnI_18p11.31a	L1	L1	L1FLnI	chr18	3694745	3704086	-	noncoding	DLGAP1	protein_coding	SENSE	ENSG00000170579	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.31b	L1	L1	L1FLnI	chr18	4220508	4231422	+	noncoding	DLGAP1	protein_coding	ANTISENSE	ENSG00000170579	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr18:4225564-4225568
L1FLnI_18p11.31c	L1	L1	L1FLnI	chr18	4471647	4480824	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP005203.1	ENSG00000266268	294230	AP005403.1	ENSG00000265545	12189	None	None
L1FLnI_18p11.31d	L1	L1	L1FLnI	chr18	4691239	4701308	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005403.1	ENSG00000265545	231781	AP005203.1	ENSG00000266268	73746	None	None
L1FLnI_18p11.31e	L1	L1	L1FLnI	chr18	4786916	4796267	+	noncoding	AP005203.1	lncRNA	ANTISENSE	ENSG00000266268	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.31f	L1	L1	L1FLnI	chr18	4786918	4796267	+	noncoding	AP005203.1	lncRNA	ANTISENSE	ENSG00000266268	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.31g	L1	L1	L1FLnI	chr18	4889297	4899217	+	noncoding	AP005203.1	lncRNA	ANTISENSE	ENSG00000266268	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.31h	L1	L1	L1FLnI	chr18	5000638	5010655	+	coding	AP005203.1,PPIAP14	lncRNA,processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000266268,ENSG00000264775	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.31i	L1	L1	L1FLnI	chr18	5118505	5128635	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01892	ENSG00000265514	19725	BOD1P2	ENSG00000215368	4114	None	None
L1FLnI_18p11.31j	L1	L1	L1FLnI	chr18	5226632	5236274	-	noncoding	AP001496.2	lncRNA	SENSE	ENSG00000265091	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr18:5233214-5233223
L1FLnI_18p11.31k	L1	L1	L1FLnI	chr18	5258957	5268317	+	noncoding	LINC00667	lncRNA	SENSE	ENSG00000263753	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.31l	L1	L1	L1FLnI	chr18	5477701	5487994	+	noncoding	EPB41L3,AP005059.2	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000082397,ENSG00000265316	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	chr18:5478351-5478364,chr18:5478400-5478404,chr18:5484083-5484087
L1FLnI_18p11.31m	L1	L1	L1FLnI	chr18	6062338	6073273	-	noncoding	AP001021.3,L3MBTL4	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000266846,ENSG00000154655	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.31n	L1	L1	L1FLnI	chr18	6062840	6073273	-	noncoding	AP001021.3,L3MBTL4	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000266846,ENSG00000154655	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.31o	L1	L1	L1FLnI	chr18	6160199	6170333	+	noncoding	L3MBTL4	protein_coding	ANTISENSE	ENSG00000154655	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.31p	L1	L1	L1FLnI	chr18	6160199	6170323	+	noncoding	L3MBTL4	protein_coding	ANTISENSE	ENSG00000154655	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.31q	L1	L1	L1FLnI	chr18	6376836	6387270	-	coding	L3MBTL4	protein_coding	SENSE	ENSG00000154655	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.31r	L1	L1	L1FLnI	chr18	6578430	6587658	+	noncoding	LINC01387	lncRNA	SENSE	ENSG00000265944	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.31s	L1	L1	L1FLnI	chr18	6696320	6706444	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP005205.1	ENSG00000261627	53842	AP005205.3	ENSG00000279479	20609	None	None
L1FLnI_18p11.23a	L1	L1	L1FLnI	chr18	7394619	7403952	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP005270.1	ENSG00000212626	93466	AP001095.1	ENSG00000286126	51892	None	None
L1FLnI_18p11.23b	L1	L1	L1FLnI	chr18	7707541	7717591	+	coding	PTPRM	protein_coding	SENSE	ENSG00000173482	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.23c	L1	L1	L1FLnI	chr18	7862710	7873159	-	coding	PTPRM	protein_coding	ANTISENSE	ENSG00000173482	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_18p11.23	L1	L1	L1ORF2	chr18	7965442	7973488	+	coding	PTPRM	protein_coding	SENSE	ENSG00000173482	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.23d	L1	L1	L1FLnI	chr18	8056954	8066963	-	coding	PTPRM	protein_coding	ANTISENSE	ENSG00000173482	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.23e	L1	L1	L1FLnI	chr18	8145822	8155615	-	noncoding	PTPRM,AC006566.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000173482,ENSG00000273368	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.22a	L1	L1	L1FLnI	chr18	8524416	8535419	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	THEMIS3P	ENSG00000229442	10567	AKR1B1P6	ENSG00000225212	10216	None	None
L1FLnI_18p11.22b	L1	L1	L1FLnI	chr18	8572716	8582866	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RAB12	ENSG00000206418	26571	AKR1B1P6	ENSG00000225212	25899	None	None
L1FLnI_18p11.22c	L1	L1	L1FLnI	chr18	8883555	8893120	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP001531.1	ENSG00000287719	20879	MTCL1	ENSG00000168502	50777	None	None
L1FLnI_18p11.22d	L1	L1	L1FLnI	chr18	8883562	8893120	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP001531.1	ENSG00000287719	20879	MTCL1	ENSG00000168502	50784	None	None
L1FLnI_18p11.22e	L1	L1	L1FLnI	chr18	8896681	8906175	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCL1	ENSG00000168502	63903	AP001531.1	ENSG00000287719	7824	None	None
L1FLnI_18p11.22f	L1	L1	L1FLnI	chr18	9165217	9174731	-	coding	AP005263.1,ANKRD12	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000265257,ENSG00000101745	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.22g	L1	L1	L1FLnI	chr18	9261457	9271279	+	coding	ANKRD12	protein_coding	SENSE	ENSG00000101745	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.22h	L1	L1	L1FLnI	chr18	9976087	9985515	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005271.1	ENSG00000265554	139073	VAPA	ENSG00000101558	16066	None	None
L1FLnI_18p11.22i	L1	L1	L1FLnI	chr18	10572170	10582178	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP001099.1	ENSG00000265728	12412	NAPG	ENSG00000134265	19406	None	None
L1FLnI_18p11.22j	L1	L1	L1FLnI	chr18	10646520	10656613	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PMM2P1	ENSG00000265038	9121	AP001180.1	ENSG00000260779	5320	None	None
L1FLnI_18p11.22k	L1	L1	L1FLnI	chr18	10646520	10656603	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PMM2P1	ENSG00000265038	9121	AP001180.1	ENSG00000260779	5330	None	None
L1FLnI_18p11.21a	L1	L1	L1FLnI	chr18	11054623	11063943	+	noncoding	PIEZO2	protein_coding	ANTISENSE	ENSG00000154864	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.21b	L1	L1	L1FLnI	chr18	11345676	11355756	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005139.1	ENSG00000263682	16844	AP005229.1	ENSG00000267051	11157	None	None
L1FLnI_18p11.21c	L1	L1	L1FLnI	chr18	11345676	11355361	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005139.1	ENSG00000263682	16844	AP005229.1	ENSG00000267051	11552	None	None
L1FLnI_18p11.21d	L1	L1	L1FLnI	chr18	11474786	11483371	-	coding	AP001109.1	lncRNA	SENSE	ENSG00000267564	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.21e	L1	L1	L1FLnI	chr18	11474843	11483371	-	coding	AP001109.1	lncRNA	SENSE	ENSG00000267564	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.21f	L1	L1	L1FLnI	chr18	12160901	12170226	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005264.2	ENSG00000267116	21977	ANKRD62	ENSG00000181626	31137	None	None
L1FLnI_18p11.21g	L1	L1	L1FLnI	chr18	12166637	12176735	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP005264.2	ENSG00000267116	15468	ANKRD62	ENSG00000181626	36873	None	None
L1FLnI_18p11.21h	L1	L1	L1FLnI	chr18	12178139	12188280	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ANKRD62	ENSG00000181626	48375	AP005264.2	ENSG00000267116	3923	None	None
L1FLnI_18p11.21i	L1	L1	L1FLnI	chr18	12201946	12211958	-	coding	AP005264.4,AP005264.5,CCDC58P3	lncRNA,transcribed_processed_pseudogene,processed_pseudogene	ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000267643,ENSG00000267733,ENSG00000267076	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr18:12211367-12211397
L1FLnI_18p11.21j	L1	L1	L1FLnI	chr18	13078138	13088261	-	coding	CEP192	protein_coding	ANTISENSE	ENSG00000101639	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.21k	L1	L1	L1FLnI	chr18	13078152	13088261	-	coding	CEP192	protein_coding	ANTISENSE	ENSG00000101639	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.21l	L1	L1	L1FLnI	chr18	13342591	13352718	-	noncoding	LDLRAD4	protein_coding	ANTISENSE	ENSG00000168675	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.21m	L1	L1	L1FLnI	chr18	13686305	13696373	+	noncoding	FAM210A	protein_coding	ANTISENSE	ENSG00000177150	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18p11.21n	L1	L1	L1FLnI	chr18	13856787	13867172	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MC2R	ENSG00000185231	14872	MC5R	ENSG00000176136	29464	None	None
L1FLnI_18p11.21o	L1	L1	L1FLnI	chr18	13893444	13902787	+	noncoding	MC2R	protein_coding	ANTISENSE	ENSG00000185231	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr18:13893493-13893727	None
L1ORF2_18p11.21	L1	L1	L1ORF2	chr18	13974846	13982893	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC006557.6	ENSG00000279352	27161	AP001086.1	ENSG00000243779	54923	None	None
L1FLnI_18p11.21p	L1	L1	L1FLnI	chr18	14037099	14047215	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC006557.5	ENSG00000270469	6736	AC006557.6	ENSG00000279352	26182	None	None
L1FLnI_18p11.21q	L1	L1	L1FLnI	chr18	14061488	14071600	+	coding	ZNF519	protein_coding	ANTISENSE	ENSG00000175322	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr18:14062427-14062748	None
L1FLnI_18p11.21r	L1	L1	L1FLnI	chr18	14159174	14168581	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NF1P5	ENSG00000175319	1832	ANKRD20A5P	ENSG00000186481	10516	None	None
L1FLnI_18p11.21s	L1	L1	L1FLnI	chr18	15228596	15238749	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	BNIP3P3	ENSG00000265631	8680	AP005901.3	ENSG00000265015	30821	None	None
L1FLnI_18p11.21t	L1	L1	L1FLnI	chr18	15228611	15238749	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	BNIP3P3	ENSG00000265631	8680	AP005901.3	ENSG00000265015	30836	None	None
L1FLnI_18q11.2a	L1	L1	L1FLnI	chr18	21882440	21892579	-	coding	AC103987.3	lncRNA	SENSE	ENSG00000264149	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_18q11.2a	L1	L1	L1ORF2	chr18	22528636	22536684	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC099849.1	ENSG00000270855	109342	RPS4XP18	ENSG00000239490	49781	None	None
L1FLnI_18q11.2b	L1	L1	L1FLnI	chr18	22613525	22622859	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS4XP18	ENSG00000239490	26298	RNU6-1032P	ENSG00000206827	24723	None	None
L1FLnI_18q11.2c	L1	L1	L1FLnI	chr18	22881897	22892020	+	coding	AC090912.1,AC090912.2,RBBP8,AC090912.3	lncRNA,lncRNA,protein_coding,lncRNA	ANTISENSE,ANTISENSE,SENSE,ANTISENSE	ENSG00000265943,ENSG00000266850,ENSG00000101773,ENSG00000273232	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_18q11.2	L1	L1	L1FLI	chr18	24618030	24626075	-	coding	LINC01915	lncRNA	ANTISENSE	ENSG00000265485	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q11.2d	L1	L1	L1FLnI	chr18	24710316	24720341	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC018697.1	ENSG00000266573	5421	LINC01915	ENSG00000265485	1774	None	None
L1FLnI_18q11.2e	L1	L1	L1FLnI	chr18	24717396	24725926	-	noncoding	AC018697.1	lncRNA	ANTISENSE	ENSG00000266573	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q11.2f	L1	L1	L1FLnI	chr18	24897659	24907726	+	coding	AC018697.1	lncRNA	SENSE	ENSG00000266573	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q11.2g	L1	L1	L1FLnI	chr18	25262954	25273422	+	noncoding	ZNF521	protein_coding	ANTISENSE	ENSG00000198795	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr18:25273217-25273221
L1FLnI_18q11.2h	L1	L1	L1FLnI	chr18	26238092	26248203	-	coding	TAF4B	protein_coding	ANTISENSE	ENSG00000141384	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr18:26245049-26245050
L1FLnI_18q11.2i	L1	L1	L1FLnI	chr18	26794024	26802804	+	noncoding	AQP4-AS1	lncRNA	SENSE	ENSG00000260372	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q11.2j	L1	L1	L1FLnI	chr18	27157605	27166167	-	coding	AQP4-AS1,CHST9	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000260372,ENSG00000154080	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_18q11.2b	L1	L1	L1ORF2	chr18	27278548	27286592	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01908	ENSG00000265374	31360	AC090403.1	ENSG00000264151	49376	None	None
L1FLnI_18q12.1a	L1	L1	L1FLnI	chr18	27500567	27509925	+	noncoding	AC090403.1	lncRNA	ANTISENSE	ENSG00000264151	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.1b	L1	L1	L1FLnI	chr18	27506510	27516539	+	coding	AC090403.1	lncRNA	ANTISENSE	ENSG00000264151	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.1c	L1	L1	L1FLnI	chr18	27506510	27516526	+	coding	AC090403.1	lncRNA	ANTISENSE	ENSG00000264151	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.1d	L1	L1	L1FLnI	chr18	27737217	27747250	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090936.1	ENSG00000286426	38571	AC090403.1	ENSG00000264151	142053	None	None
L1FLnI_18q12.1e	L1	L1	L1FLnI	chr18	27737228	27747250	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090936.1	ENSG00000286426	38571	AC090403.1	ENSG00000264151	142064	None	None
L1FLnI_18q12.1f	L1	L1	L1FLnI	chr18	28236945	28246953	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CDH2	ENSG00000170558	59815	AC090365.1	ENSG00000265994	391761	None	None
L1FLnI_18q12.1g	L1	L1	L1FLnI	chr18	28236945	28246940	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CDH2	ENSG00000170558	59815	AC090365.1	ENSG00000265994	391774	None	None
L1FLnI_18q12.1h	L1	L1	L1FLnI	chr18	28416046	28426061	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090365.1	ENSG00000265994	212653	CDH2	ENSG00000170558	238916	None	None
L1FLnI_18q12.1i	L1	L1	L1FLnI	chr18	28435736	28445461	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090365.1	ENSG00000265994	193253	CDH2	ENSG00000170558	258606	None	None
L1FLnI_18q12.1j	L1	L1	L1FLnI	chr18	29731898	29740779	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC115100.1	ENSG00000286605	549382	AC117569.2	ENSG00000287803	81458	None	None
L1FLnI_18q12.1k	L1	L1	L1FLnI	chr18	29809306	29818076	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC117569.2	ENSG00000287803	158866	AC115100.1	ENSG00000286605	472085	None	None
L1FLnI_18q12.1l	L1	L1	L1FLnI	chr18	30021351	30030957	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC115100.1	ENSG00000286605	259204	AC117569.2	ENSG00000287803	370911	None	None
L1FLnI_18q12.1m	L1	L1	L1FLnI	chr18	30021364	30030957	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC115100.1	ENSG00000286605	259204	AC117569.2	ENSG00000287803	370924	None	None
L1FLnI_18q12.1n	L1	L1	L1FLnI	chr18	30727164	30737584	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090506.1	ENSG00000266196	12878	AC090506.2	ENSG00000279734	42422	None	None
L1FLnI_18q12.1o	L1	L1	L1FLnI	chr18	30748513	30758728	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090506.1	ENSG00000266196	34227	AC090506.2	ENSG00000279734	21278	None	None
L1FLnI_18q12.1p	L1	L1	L1FLnI	chr18	30843796	30854237	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016382.1	ENSG00000265670	100583	AC090506.2	ENSG00000279734	63372	None	None
L1FLnI_18q12.1q	L1	L1	L1FLnI	chr18	31347470	31357496	-	coding	DSG1,DSG1-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000134760,ENSG00000266729	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.1r	L1	L1	L1FLnI	chr18	32227577	32237434	-	coding	GAREM1	protein_coding	SENSE	ENSG00000141441	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.1s	L1	L1	L1FLnI	chr18	32392217	32401834	+	coding	GAREM1	protein_coding	ANTISENSE	ENSG00000141441	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.1t	L1	L1	L1FLnI	chr18	32856154	32866184	-	coding	AC090371.2	lncRNA	ANTISENSE	ENSG00000263765	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.1u	L1	L1	L1FLnI	chr18	33233113	33244042	+	coding	CCDC178	protein_coding	ANTISENSE	ENSG00000166960	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.1v	L1	L1	L1FLnI	chr18	33233113	33241929	+	coding	CCDC178	protein_coding	ANTISENSE	ENSG00000166960	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.1w	L1	L1	L1FLnI	chr18	33265239	33275122	+	noncoding	CCDC178	protein_coding	ANTISENSE	ENSG00000166960	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.1x	L1	L1	L1FLnI	chr18	33378892	33389019	+	noncoding	CCDC178	protein_coding	ANTISENSE	ENSG00000166960	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.1y	L1	L1	L1FLnI	chr18	33783380	33793528	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ASXL3	ENSG00000141431	32185	NOL4	ENSG00000101746	57572	None	None
L1FLnI_18q12.1z	L1	L1	L1FLnI	chr18	34296262	34308232	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104985.2	ENSG00000278052	69833	DTNA	ENSG00000134769	185058	None	None
L1FLnI_18q12.1aa	L1	L1	L1FLnI	chr18	34327617	34337636	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC104985.2	ENSG00000278052	101188	DTNA	ENSG00000134769	155654	None	None
L1FLnI_18q12.1ba	L1	L1	L1FLnI	chr18	34423474	34433171	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DTNA	ENSG00000134769	60119	AC104985.2	ENSG00000278052	197045	None	None
L1FLnI_18q12.1ca	L1	L1	L1FLnI	chr18	34551880	34561895	-	coding	DTNA	protein_coding	ANTISENSE	ENSG00000134769	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.1da	L1	L1	L1FLnI	chr18	34664931	34675027	-	coding	DTNA	protein_coding	ANTISENSE	ENSG00000134769	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.1ea	L1	L1	L1FLnI	chr18	34683651	34694091	-	noncoding	DTNA	protein_coding	ANTISENSE	ENSG00000134769	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.1fa	L1	L1	L1FLnI	chr18	34891276	34901428	+	noncoding	DTNA,AC068506.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000134769,ENSG00000278464	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.2a	L1	L1	L1FLnI	chr18	35146496	35156129	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF397	ENSG00000186812	84901	AC015967.1	ENSG00000274400	1079	None	None
L1FLnI_18q12.2b	L1	L1	L1FLnI	chr18	35146532	35156129	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF397	ENSG00000186812	84901	AC015967.1	ENSG00000274400	1115	None	None
L1FLnI_18q12.2c	L1	L1	L1FLnI	chr18	35202281	35212309	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC015967.1	ENSG00000274400	56864	ZNF397	ENSG00000186812	28721	None	None
L1FLnI_18q12.2d	L1	L1	L1FLnI	chr18	35624090	35634205	+	coding	GALNT1	protein_coding	SENSE	ENSG00000141429	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.2e	L1	L1	L1FLnI	chr18	35720596	35729433	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090229.1	ENSG00000267397	2618	NRBF2P1	ENSG00000267797	112326	None	None
L1FLnI_18q12.2f	L1	L1	L1FLnI	chr18	35756810	35766912	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090229.1	ENSG00000267397	38832	NRBF2P1	ENSG00000267797	74847	None	None
L1FLnI_18q12.2g	L1	L1	L1FLnI	chr18	35787122	35797248	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090229.1	ENSG00000267397	69144	NRBF2P1	ENSG00000267797	44511	None	None
L1FLnI_18q12.2h	L1	L1	L1FLnI	chr18	35893982	35904137	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NRBF2P1	ENSG00000267797	51365	MIR187	ENSG00000207797	681	None	None
L1FLnI_18q12.2i	L1	L1	L1FLnI	chr18	36234636	36244652	-	coding	MOCOS	protein_coding	ANTISENSE	ENSG00000075643	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.2j	L1	L1	L1FLnI	chr18	36242411	36251428	-	noncoding	MOCOS	protein_coding	ANTISENSE	ENSG00000075643	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.2k	L1	L1	L1FLnI	chr18	36993877	37002718	+	coding	KIAA1328	protein_coding	SENSE	ENSG00000150477	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.2l	L1	L1	L1FLnI	chr18	37014664	37023607	-	noncoding	KIAA1328	protein_coding	ANTISENSE	ENSG00000150477	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.2m	L1	L1	L1FLnI	chr18	37071387	37079990	+	coding	KIAA1328	protein_coding	SENSE	ENSG00000150477	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.2n	L1	L1	L1FLnI	chr18	37071387	37080013	+	coding	KIAA1328	protein_coding	SENSE	ENSG00000150477	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.2o	L1	L1	L1FLnI	chr18	37108058	37118153	+	noncoding	KIAA1328	protein_coding	SENSE	ENSG00000150477	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.2p	L1	L1	L1FLnI	chr18	37212657	37221408	-	noncoding	KIAA1328	protein_coding	ANTISENSE	ENSG00000150477	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_18q12.2	L1	L1	L1FLI	chr18	37818737	37826785	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC009899.1	ENSG00000285940	56606	AC108452.1	ENSG00000286716	133435	None	None
L1FLnI_18q12.2q	L1	L1	L1FLnI	chr18	37827790	37836431	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108452.1	ENSG00000286716	123789	AC009899.1	ENSG00000285940	65659	None	None
L1FLnI_18q12.2r	L1	L1	L1FLnI	chr18	37854362	37863243	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108452.1	ENSG00000286716	96977	AC009899.1	ENSG00000285940	92231	None	None
L1FLnI_18q12.2s	L1	L1	L1FLnI	chr18	38738485	38748534	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC100781.1	ENSG00000268566	50452	RN7SKP182	ENSG00000222704	267513	None	None
L1FLnI_18q12.2t	L1	L1	L1FLnI	chr18	38915613	38924206	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP182	ENSG00000222704	91841	AC100781.1	ENSG00000268566	227580	None	None
L1FLnI_18q12.2u	L1	L1	L1FLnI	chr18	39388143	39396745	+	noncoding	MIR924HG	lncRNA	ANTISENSE	ENSG00000267374	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.2v	L1	L1	L1FLnI	chr18	39421225	39431560	+	noncoding	MIR924HG	lncRNA	ANTISENSE	ENSG00000267374	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.3a	L1	L1	L1FLnI	chr18	39562094	39572114	+	coding	MIR924HG	lncRNA	ANTISENSE	ENSG00000267374	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.3b	L1	L1	L1FLnI	chr18	39562094	39572134	+	coding	MIR924HG	lncRNA	ANTISENSE	ENSG00000267374	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.3c	L1	L1	L1FLnI	chr18	39920871	39930934	+	coding	LINC01901	lncRNA	ANTISENSE	ENSG00000267413	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.3d	L1	L1	L1FLnI	chr18	40113591	40123705	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL17P45	ENSG00000267664	20221	LINC01477	ENSG00000261715	14358	None	None
L1FLnI_18q12.3e	L1	L1	L1FLnI	chr18	40113601	40123705	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL17P45	ENSG00000267664	20221	LINC01477	ENSG00000261715	14368	None	None
L1ORF2_18q12.3a	L1	L1	L1ORF2	chr18	40186627	40194661	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC068688.1	ENSG00000286844	51218	RPL17P45	ENSG00000267664	42123	None	None
L1ORF2_18q12.3b	L1	L1	L1ORF2	chr18	41630739	41638787	+	coding	AC021504.1	lncRNA	ANTISENSE	ENSG00000267313	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.3f	L1	L1	L1FLnI	chr18	41771516	41781545	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC021504.1	ENSG00000267313	139331	NPM1P1	ENSG00000267652	7617	None	None
L1FLnI_18q12.3g	L1	L1	L1FLnI	chr18	42376772	42385385	-	noncoding	LINC00907	lncRNA	ANTISENSE	ENSG00000267586	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.3h	L1	L1	L1FLnI	chr18	42590534	42600013	-	noncoding	LINC00907	lncRNA	ANTISENSE	ENSG00000267586	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.3i	L1	L1	L1FLnI	chr18	42656821	42667056	+	coding	LINC00907,AC084335.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000267586,ENSG00000286976	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.3j	L1	L1	L1FLnI	chr18	43282427	43292578	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SYT4	ENSG00000132872	4892	AC022743.1	ENSG00000278933	206595	None	None
L1FLnI_18q12.3k	L1	L1	L1FLnI	chr18	43553116	43563964	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC083760.1	ENSG00000267716	475507	AC022743.1	ENSG00000278933	53280	None	None
L1FLnI_18q12.3l	L1	L1	L1FLnI	chr18	43715854	43725679	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022743.1	ENSG00000278933	216018	AC083760.1	ENSG00000267716	313792	None	None
L1FLnI_18q12.3m	L1	L1	L1FLnI	chr18	43831999	43842122	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022743.1	ENSG00000278933	332163	AC083760.1	ENSG00000267716	197349	None	None
L1FLnI_18q12.3n	L1	L1	L1FLnI	chr18	43980487	43990886	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022743.1	ENSG00000278933	480651	AC083760.1	ENSG00000267716	48585	None	None
L1FLnI_18q12.3o	L1	L1	L1FLnI	chr18	43980487	43990694	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022743.1	ENSG00000278933	480651	AC083760.1	ENSG00000267716	48777	None	None
L1FLnI_18q12.3p	L1	L1	L1FLnI	chr18	44249780	44259931	-	coding	AC110014.1	lncRNA	ANTISENSE	ENSG00000285550	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.3q	L1	L1	L1FLnI	chr18	44296400	44306488	+	noncoding	AC110014.1,LINC01478	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000285550,ENSG00000267337	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.3r	L1	L1	L1FLnI	chr18	44352138	44361166	-	noncoding	LINC01478	lncRNA	SENSE	ENSG00000267337	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.3s	L1	L1	L1FLnI	chr18	44352138	44360729	-	noncoding	LINC01478	lncRNA	SENSE	ENSG00000267337	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.3t	L1	L1	L1FLnI	chr18	44361864	44370914	-	noncoding	LINC01478	lncRNA	SENSE	ENSG00000267337	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.3u	L1	L1	L1FLnI	chr18	44412421	44422883	+	noncoding	LINC01478	lncRNA	ANTISENSE	ENSG00000267337	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.3v	L1	L1	L1FLnI	chr18	44927445	44937565	-	noncoding	SETBP1	protein_coding	ANTISENSE	ENSG00000152217	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.3w	L1	L1	L1FLnI	chr18	45471384	45481946	-	coding	SLC14A2,SLC14A2-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000132874,ENSG00000267097	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr18:45478996-45479003,chr18:45479024-45479035
L1FLnI_18q12.3x	L1	L1	L1FLnI	chr18	45690974	45701093	+	coding	AC023421.2,SLC14A1	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000288545,ENSG00000141469	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q12.3y	L1	L1	L1FLnI	chr18	45793572	45803709	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SIGLEC15	ENSG00000197046	21966	AC087685.1	ENSG00000267558	4902	chr18:45793425-45793830,chr18:45802865-45803004	None
L1FLnI_18q21.1a	L1	L1	L1FLnI	chr18	46739121	46748736	+	coding	ST8SIA5	protein_coding	ANTISENSE	ENSG00000101638	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q21.1b	L1	L1	L1FLnI	chr18	46922568	46932142	-	coding	KATNAL2	protein_coding	ANTISENSE	ENSG00000167216	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q21.1c	L1	L1	L1FLnI	chr18	47347727	47357743	-	coding	MIR4527HG	lncRNA	ANTISENSE	ENSG00000267761	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q21.1d	L1	L1	L1FLnI	chr18	47633821	47643979	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TPMTP1	ENSG00000267156	2973	AC026898.1	ENSG00000267187	59196	None	None
L1FLnI_18q21.1e	L1	L1	L1FLnI	chr18	47633821	47643985	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TPMTP1	ENSG00000267156	2973	AC026898.1	ENSG00000267187	59190	None	None
L1FLnI_18q21.1f	L1	L1	L1FLnI	chr18	47656875	47666902	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TPMTP1	ENSG00000267156	26027	AC026898.1	ENSG00000267187	36273	None	None
L1FLnI_18q21.1g	L1	L1	L1FLnI	chr18	48234764	48243481	+	noncoding	ZBTB7C	protein_coding	ANTISENSE	ENSG00000184828	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q21.1h	L1	L1	L1FLnI	chr18	48502045	48510757	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POLR3GP2	ENSG00000266984	22817	CTIF	ENSG00000134030	28274	None	None
L1FLnI_18q21.1i	L1	L1	L1FLnI	chr18	48645487	48655635	+	noncoding	CTIF	protein_coding	SENSE	ENSG00000134030	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q21.1j	L1	L1	L1FLnI	chr18	49101920	49112050	-	coding	DYM	protein_coding	SENSE	ENSG00000141627	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q21.1k	L1	L1	L1FLnI	chr18	49212270	49223692	+	coding	DYM	protein_coding	ANTISENSE	ENSG00000141627	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr18:49212928-49213151,chr18:49214558-49214994	chr18:49212928-49212944,chr18:49212955-49212980
L1FLnI_18q21.1l	L1	L1	L1FLnI	chr18	49417042	49427051	+	coding	DYM	protein_coding	ANTISENSE	ENSG00000141627	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q21.1m	L1	L1	L1FLnI	chr18	49710000	49720412	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090227.3	ENSG00000267674	19411	SMUG1P1	ENSG00000267444	58840	None	None
L1FLnI_18q21.1n	L1	L1	L1FLnI	chr18	49770581	49780063	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ACAA2	ENSG00000167315	2101	AC090227.3	ENSG00000267674	28518	None	None
L1FLI_18q21.1	L1	L1	L1FLI	chr18	50342943	50350991	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SKA1	ENSG00000154839	24049	RNA5SP458	ENSG00000251997	23823	None	None
L1FLnI_18q21.2a	L1	L1	L1FLnI	chr18	51700481	51710230	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS8P3	ENSG00000215457	134777	AC027216.1	ENSG00000265712	12272	None	None
L1FLnI_18q21.2b	L1	L1	L1FLnI	chr18	51737133	51747165	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC027216.1	ENSG00000265712	48924	RPS8P3	ENSG00000215457	97842	None	None
L1FLnI_18q21.2c	L1	L1	L1FLnI	chr18	51966406	51974986	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC016383.3	ENSG00000286283	248092	RPS8P3	ENSG00000215457	120778	None	None
L1FLnI_18q21.2d	L1	L1	L1FLnI	chr18	52071047	52079775	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016383.3	ENSG00000286283	143303	RPS8P3	ENSG00000215457	225419	None	None
L1FLnI_18q21.2e	L1	L1	L1FLnI	chr18	52632340	52642514	+	noncoding	DCC	protein_coding	SENSE	ENSG00000187323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q21.2f	L1	L1	L1FLnI	chr18	52632340	52642978	+	coding	DCC	protein_coding	SENSE	ENSG00000187323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q21.2g	L1	L1	L1FLnI	chr18	52881828	52890382	-	noncoding	DCC	protein_coding	ANTISENSE	ENSG00000187323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q21.2h	L1	L1	L1FLnI	chr18	53254716	53264851	-	coding	DCC	protein_coding	ANTISENSE	ENSG00000187323	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q21.2i	L1	L1	L1FLnI	chr18	53507952	53517956	+	coding	DCC,LINC01917	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000187323,ENSG00000260433	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q21.2j	L1	L1	L1FLnI	chr18	53507952	53517943	+	coding	DCC,LINC01917	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000187323,ENSG00000260433	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q21.2k	L1	L1	L1FLnI	chr18	53800684	53810832	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01919	ENSG00000263438	170694	AC090666.1	ENSG00000264296	331301	None	None
L1FLnI_18q21.2l	L1	L1	L1FLnI	chr18	53800684	53810824	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01919	ENSG00000263438	170694	AC090666.1	ENSG00000264296	331309	None	None
L1FLnI_18q21.2m	L1	L1	L1FLnI	chr18	53827884	53837990	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090666.1	ENSG00000264296	304143	LINC01919	ENSG00000263438	197894	None	None
L1FLnI_18q21.2n	L1	L1	L1FLnI	chr18	53973269	53983340	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090666.1	ENSG00000264296	158793	LINC01919	ENSG00000263438	343279	None	None
L1FLnI_18q21.2o	L1	L1	L1FLnI	chr18	54569023	54577964	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC091135.2	ENSG00000288484	577	AC091135.1	ENSG00000267428	1720	None	None
L1FLnI_18q21.2p	L1	L1	L1FLnI	chr18	54663708	54673837	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RAB27B	ENSG00000041353	44023	DYNAP	ENSG00000178690	64215	None	None
L1FLnI_18q21.2q	L1	L1	L1FLnI	chr18	55714986	55725029	-	coding	AC022031.2	lncRNA	ANTISENSE	ENSG00000267284	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q21.2r	L1	L1	L1FLnI	chr18	55886914	55896939	-	coding	LINC01416,AC009271.1	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000260930,ENSG00000267327	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q21.2s	L1	L1	L1FLnI	chr18	56010062	56019610	-	coding	AC009271.1,AC006305.2	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000267327,ENSG00000206129	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q21.31a	L1	L1	L1FLnI	chr18	56422425	56431697	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006305.2	ENSG00000206129	231163	TXNL1	ENSG00000091164	165512	None	None
L1FLnI_18q21.31b	L1	L1	L1FLnI	chr18	56522071	56532197	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC006305.2	ENSG00000206129	330809	TXNL1	ENSG00000091164	65012	None	None
L1FLnI_18q21.31c	L1	L1	L1FLnI	chr18	56522071	56532195	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC006305.2	ENSG00000206129	330809	TXNL1	ENSG00000091164	65014	None	None
L1FLnI_18q21.31d	L1	L1	L1FLnI	chr18	57098779	57108461	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC100775.1	ENSG00000267789	27861	LINC-ROR	ENSG00000258609	26660	None	None
L1FLnI_18q21.31e	L1	L1	L1FLnI	chr18	57256198	57266228	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02565	ENSG00000267726	85004	RNU6-737P	ENSG00000202240	18374	None	None
L1FLnI_18q21.31f	L1	L1	L1FLnI	chr18	57715750	57725764	+	coding	AC027097.2,ATP8B1	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000267787,ENSG00000081923	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr18:57715578-57715802	None
L1FLnI_18q21.32a	L1	L1	L1FLnI	chr18	59253150	59263281	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GRP	ENSG00000134443	22376	RAX	ENSG00000134438	3754	None	None
L1FLnI_18q21.32b	L1	L1	L1FLnI	chr18	59336720	59345310	+	noncoding	LMAN1	protein_coding	ANTISENSE	ENSG00000074695	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q21.32c	L1	L1	L1FLnI	chr18	59366284	59375650	-	noncoding	AC016229.2	lncRNA	ANTISENSE	ENSG00000267677	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_18q21.32	L1	L1	L1FLI	chr18	59402927	59410973	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CCBE1	ENSG00000183287	19966	AC016229.2	ENSG00000267677	16178	None	None
L1FLnI_18q21.32d	L1	L1	L1FLnI	chr18	59767861	59777943	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS26P54	ENSG00000224161	5956	GLUD1P4	ENSG00000267486	629	None	None
L1FLnI_18q21.32e	L1	L1	L1FLnI	chr18	60029180	60039207	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090771.2	ENSG00000267686	85826	RNU6-567P	ENSG00000252555	10449	None	None
L1FLnI_18q21.32f	L1	L1	L1FLnI	chr18	60071285	60082032	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-567P	ENSG00000252555	52554	AC090771.2	ENSG00000267686	43001	None	None
L1FLnI_18q21.32g	L1	L1	L1FLnI	chr18	60327806	60337610	+	noncoding	AC091576.1	lncRNA	SENSE	ENSG00000285681	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q21.32h	L1	L1	L1FLnI	chr18	60327806	60338055	+	noncoding	AC091576.1	lncRNA	SENSE	ENSG00000285681	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q21.32i	L1	L1	L1FLnI	chr18	61262206	61270998	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC113137.1	ENSG00000267098	359480	CDH20	ENSG00000101542	62432	None	None
L1FLnI_18q21.33a	L1	L1	L1FLnI	chr18	61310105	61320239	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CDH20	ENSG00000101542	13191	AC113137.1	ENSG00000267098	407379	None	None
L1FLnI_18q21.33b	L1	L1	L1FLnI	chr18	62902794	62912814	+	coding	PHLPP1	protein_coding	SENSE	ENSG00000081913	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr18:62905215-62905260
L1FLnI_18q21.33c	L1	L1	L1FLnI	chr18	63684240	63694731	+	noncoding	SERPINB11	protein_coding	SENSE	ENSG00000206072	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q21.33d	L1	L1	L1FLnI	chr18	63855325	63865073	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SERPINB2	ENSG00000197632	6619	SERPINB7	ENSG00000166396	49949	chr18:63859717-63859989	None
L1FLnI_18q22.1a	L1	L1	L1FLnI	chr18	63936874	63947271	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SERPINB10	ENSG00000242550	763	HMSD	ENSG00000221887	2030	chr18:63936670-63937014	None
L1FLnI_18q22.1b	L1	L1	L1FLnI	chr18	64225886	64235970	-	coding	LINC01924,LINC01538	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000267134,ENSG00000266952	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q22.1c	L1	L1	L1FLnI	chr18	64420779	64430904	+	coding	LINC01924	lncRNA	SENSE	ENSG00000267134	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q22.1d	L1	L1	L1FLnI	chr18	64569067	64579176	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01924	ENSG00000267134	145466	AC027506.1	ENSG00000275448	98620	None	None
L1FLnI_18q22.1e	L1	L1	L1FLnI	chr18	65162916	65172946	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007948.1	ENSG00000263863	37206	AC007631.1	ENSG00000264131	13213	None	None
L1FLnI_18q22.1f	L1	L1	L1FLnI	chr18	66711576	66721605	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CDH19	ENSG00000071991	107438	RNU6-1037P	ENSG00000238680	224511	None	None
L1FLnI_18q22.1g	L1	L1	L1FLnI	chr18	66836791	66845709	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDH19	ENSG00000071991	232653	RNU6-1037P	ENSG00000238680	100407	None	None
L1FLnI_18q22.1h	L1	L1	L1FLnI	chr18	67111466	67120277	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL31P9	ENSG00000264054	17334	MIR5011	ENSG00000263354	29780	None	None
L1FLnI_18q22.1i	L1	L1	L1FLnI	chr18	67377177	67385947	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC110597.1	ENSG00000260578	95844	AC091042.1	ENSG00000265936	1872	None	None
L1FLnI_18q22.1j	L1	L1	L1FLnI	chr18	67446084	67454964	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC110597.1	ENSG00000260578	26827	AC091042.1	ENSG00000265936	70779	None	None
L1FLnI_18q22.1k	L1	L1	L1FLnI	chr18	67457526	67466307	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC110597.1	ENSG00000260578	15484	AC091042.1	ENSG00000265936	82221	None	None
L1FLnI_18q22.1l	L1	L1	L1FLnI	chr18	67842451	67852219	+	noncoding	AC114689.3	lncRNA	SENSE	ENSG00000265533	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q22.1m	L1	L1	L1FLnI	chr18	67971142	67981585	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC068112.1	ENSG00000264869	120502	AC100844.1	ENSG00000264634	14716	None	None
L1FLnI_18q22.1n	L1	L1	L1FLnI	chr18	68632397	68642944	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMX3	ENSG00000166479	30744	AC067819.1	ENSG00000264697	104274	None	None
L1FLnI_18q22.1o	L1	L1	L1FLnI	chr18	68784336	68794353	-	coding	CCDC102B	protein_coding	ANTISENSE	ENSG00000150636	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q22.2a	L1	L1	L1FLnI	chr18	69446061	69455572	+	coding	DOK6	protein_coding	SENSE	ENSG00000206052	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q22.2b	L1	L1	L1FLnI	chr18	69446061	69455589	+	coding	DOK6	protein_coding	SENSE	ENSG00000206052	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q22.2c	L1	L1	L1FLnI	chr18	70153294	70162879	+	noncoding	RTTN	protein_coding	ANTISENSE	ENSG00000176225	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q22.2d	L1	L1	L1FLnI	chr18	70232927	70242396	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC021701.1	ENSG00000287646	24146	SOCS6	ENSG00000170677	46649	chr18:70234759-70235043	None
L1FLnI_18q22.2e	L1	L1	L1FLnI	chr18	70342443	70352581	-	noncoding	LINC01909	lncRNA	ANTISENSE	ENSG00000266258	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q22.2f	L1	L1	L1FLnI	chr18	70710816	70720947	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GTSCR1	ENSG00000263417	60072	AC090415.2	ENSG00000265781	279530	None	None
L1FLnI_18q22.2g	L1	L1	L1FLnI	chr18	70732371	70742476	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GTSCR1	ENSG00000263417	81627	AC090415.2	ENSG00000265781	258001	None	None
L1FLI_18q22.2	L1	L1	L1FLI	chr18	70745537	70753583	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC090415.2	ENSG00000265781	246894	GTSCR1	ENSG00000263417	94793	None	None
L1FLnI_18q22.2h	L1	L1	L1FLnI	chr18	70938708	70948019	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GTSCR1	ENSG00000263417	287964	AC090415.2	ENSG00000265781	52458	None	None
L1FLnI_18q22.3a	L1	L1	L1FLnI	chr18	72025433	72034756	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CBLN2	ENSG00000141668	501924	AC069114.1	ENSG00000265995	80856	None	None
L1FLnI_18q22.3b	L1	L1	L1FLnI	chr18	72593794	72602645	-	noncoding	CBLN2	protein_coding	SENSE	ENSG00000141668	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_18q22.3	L1	L1	L1ORF2	chr18	72965513	72973558	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02864	ENSG00000263711	177683	AC091138.1	ENSG00000263958	84114	None	None
L1FLnI_18q22.3c	L1	L1	L1FLnI	chr18	73012982	73022598	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC091138.1	ENSG00000263958	131583	LINC02864	ENSG00000263711	128643	None	None
L1FLnI_18q22.3d	L1	L1	L1FLnI	chr18	74049460	74059879	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC090125.1	ENSG00000263655	15299	FBXO15	ENSG00000141665	13474	None	None
L1ORF2_18q23	L1	L1	L1ORF2	chr18	75845851	75853897	+	coding	AC021506.1	lncRNA	ANTISENSE	ENSG00000266460	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q23a	L1	L1	L1FLnI	chr18	76189605	76198565	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01893	ENSG00000264260	10857	AC103808.6	ENSG00000266743	11867	None	None
L1FLnI_18q23b	L1	L1	L1FLnI	chr18	76290405	76300349	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF516	ENSG00000101493	57333	AC103808.5	ENSG00000266614	30291	None	None
L1FLnI_18q23c	L1	L1	L1FLnI	chr18	76323973	76335333	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC103808.5	ENSG00000266614	63859	ZNF516	ENSG00000101493	22349	None	None
L1FLnI_18q23d	L1	L1	L1FLnI	chr18	77284843	77294793	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC124254.2	ENSG00000264015	126826	GALR1	ENSG00000166573	6943	None	None
L1FLnI_18q23e	L1	L1	L1FLnI	chr18	77415478	77425502	-	coding	AC124254.2	lncRNA	ANTISENSE	ENSG00000264015	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q23f	L1	L1	L1FLnI	chr18	77531643	77541800	-	coding	AC124254.2	lncRNA	ANTISENSE	ENSG00000264015	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_18q23g	L1	L1	L1FLnI	chr18	77574257	77584381	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC124254.2	ENSG00000264015	13213	AC123786.1	ENSG00000264693	38171	None	None
L1FLnI_18q23h	L1	L1	L1FLnI	chr18	77574257	77584365	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC124254.2	ENSG00000264015	13213	AC123786.1	ENSG00000264693	38187	None	None
L1FLnI_18q23i	L1	L1	L1FLnI	chr18	77633618	77643757	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC123786.2	ENSG00000271702	258	AC123786.3	ENSG00000286727	3257	None	None
L1FLnI_18q23j	L1	L1	L1FLnI	chr18	78879857	78889393	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC044873.1	ENSG00000266273	83185	AC091027.2	ENSG00000266586	19236	None	None
L1FLnI_18q23k	L1	L1	L1FLnI	chr18	79284123	79294266	-	coding	ATP9B	protein_coding	ANTISENSE	ENSG00000166377	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr18:79284132-79284175
L1FLnI_18q23l	L1	L1	L1FLnI	chr18	79494432	79503735	+	coding	NFATC1,AC018445.4	protein_coding,TEC	SENSE,SENSE	ENSG00000131196,ENSG00000279981	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr18:79495698-79496078	None
L1FLnI_19p13.3	L1	L1	L1FLnI	chr19	142978	153399	+	noncoding	WBP1LP11	processed_pseudogene	SENSE	ENSG00000267792	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19p13.2a	L1	L1	L1FLnI	chr19	8795346	8805496	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF558	ENSG00000167785	674	AC012616.1	ENSG00000268922	16485	None	None
L1FLnI_19p13.2b	L1	L1	L1FLnI	chr19	9394206	9404256	+	noncoding	AC011451.3	lncRNA	ANTISENSE	ENSG00000283108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19p13.2c	L1	L1	L1FLnI	chr19	11902756	11912330	+	noncoding	ZNF69	protein_coding	SENSE	ENSG00000198429	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19p13.2d	L1	L1	L1FLnI	chr19	12004313	12014315	-	coding	ZNF433-AS1,AC008770.4	lncRNA,protein_coding	ANTISENSE,ANTISENSE	ENSG00000219665,ENSG00000286098	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19p13.11	L1	L1	L1FLnI	chr19	19721773	19730701	-	noncoding	ZNF14	protein_coding	SENSE	ENSG00000105708	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19p12a	L1	L1	L1FLnI	chr19	19917452	19927555	-	coding	ZNF93	protein_coding	ANTISENSE	ENSG00000184635	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19p12b	L1	L1	L1FLnI	chr19	20478944	20489075	+	noncoding	AC008554.1	lncRNA	SENSE	ENSG00000269043	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19p12c	L1	L1	L1FLnI	chr19	20486827	20497107	+	noncoding	AC008554.1	lncRNA	SENSE	ENSG00000269043	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19p12d	L1	L1	L1FLnI	chr19	20627283	20637439	-	coding	AC010636.2,ZNF626	lncRNA,protein_coding	SENSE,SENSE	ENSG00000269110,ENSG00000188171	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr19:20637016-20637017
L1FLnI_19p12e	L1	L1	L1FLnI	chr19	20804226	20814327	+	coding	ZNF66	protein_coding	SENSE	ENSG00000160229	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19p12f	L1	L1	L1FLnI	chr19	20837523	20847652	+	coding	AC008739.2	unprocessed_pseudogene	ANTISENSE	ENSG00000269373	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19p12g	L1	L1	L1FLnI	chr19	20984403	20993039	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC008739.1	ENSG00000268326	1193	ZNF430	ENSG00000118620	27595	None	None
L1FLnI_19p12h	L1	L1	L1FLnI	chr19	21894158	21903594	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF208	ENSG00000160321	29364	ZNF43	ENSG00000198521	42033	None	None
L1FLnI_19p12i	L1	L1	L1FLnI	chr19	21973785	21982575	+	noncoding	ZNF208	protein_coding	ANTISENSE	ENSG00000160321	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19p12j	L1	L1	L1FLnI	chr19	22144871	22155009	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTDHP5	ENSG00000269575	3754	VN1R85P	ENSG00000269345	19757	None	None
L1FLnI_19p12k	L1	L1	L1FLnI	chr19	22155002	22165153	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	VN1R85P	ENSG00000269345	9613	MTDHP5	ENSG00000269575	13885	None	None
L1FLnI_19p12l	L1	L1	L1FLnI	chr19	22180558	22190817	+	noncoding	ZNF676	protein_coding	ANTISENSE	ENSG00000196109	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr19:22182582-22182586
L1FLnI_19p12m	L1	L1	L1FLnI	chr19	22559854	22570107	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011467.6	ENSG00000271149	25372	RNU6-1179P	ENSG00000207397	4487	None	None
L1FLnI_19p12n	L1	L1	L1FLnI	chr19	22946018	22956172	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC022145.2	ENSG00000269458	20471	ZNF728	ENSG00000269067	18711	None	None
L1FLnI_19p12o	L1	L1	L1FLnI	chr19	22974986	22984512	+	noncoding	ZNF728	protein_coding	ANTISENSE	ENSG00000269067	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19p12p	L1	L1	L1FLnI	chr19	23429634	23439785	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	VN1R92P	ENSG00000268908	4477	LINC01224	ENSG00000269416	13559	None	None
L1FLnI_19p12q	L1	L1	L1FLnI	chr19	23451261	23461388	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC074140.1	ENSG00000275201	18374	VN1R92P	ENSG00000268908	6072	None	None
L1FLnI_19p12r	L1	L1	L1FLnI	chr19	23609937	23620160	+	coding	ZNF675	protein_coding	ANTISENSE	ENSG00000197372	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19p12s	L1	L1	L1FLnI	chr19	23889947	23899955	-	coding	AC011503.4	lncRNA	ANTISENSE	ENSG00000287399	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19p12t	L1	L1	L1FLnI	chr19	24012880	24022977	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC092279.2	ENSG00000268362	10424	RNA5-8SP4	ENSG00000201966	8373	None	None
L1FLnI_19p12u	L1	L1	L1FLnI	chr19	24147021	24157203	-	coding	AC073534.2	lncRNA	ANTISENSE	ENSG00000276030	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19p12v	L1	L1	L1FLnI	chr19	24147030	24157203	-	coding	AC073534.2	lncRNA	ANTISENSE	ENSG00000276030	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19p11a	L1	L1	L1FLnI	chr19	24228231	24237885	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073534.1	ENSG00000268442	64806	ERVK-28	ENSG00000267696	3400598	None	None
L1FLnI_19p11b	L1	L1	L1FLnI	chr19	24390541	24400443	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073534.1	ENSG00000268442	227116	ERVK-28	ENSG00000267696	3238040	None	None
L1FLnI_19p11c	L1	L1	L1FLnI	chr19	24405425	24414492	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ERVK-28	ENSG00000267696	3223991	AC073534.1	ENSG00000268442	242000	None	None
L1FLnI_19q11a	L1	L1	L1FLnI	chr19	27280055	27289914	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ERVK-28	ENSG00000267696	348569	AC073534.1	ENSG00000268442	3116630	None	None
L1FLnI_19q11b	L1	L1	L1FLnI	chr19	27320868	27330838	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073534.1	ENSG00000268442	3157443	ERVK-28	ENSG00000267696	307645	None	None
L1FLnI_19q11c	L1	L1	L1FLnI	chr19	27694940	27705087	-	coding	LINC00662	lncRNA	SENSE	ENSG00000261824	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr19:27694134-27694988	chr19:27702350-27702354
L1FLnI_19q11d	L1	L1	L1FLnI	chr19	27849202	27859330	+	coding	AC006504.5,AC006504.2	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000267575,ENSG00000266977	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr19:27858983-27859119	None
L1FLnI_19q11e	L1	L1	L1FLnI	chr19	28084151	28093497	+	coding	AC010511.1	lncRNA	SENSE	ENSG00000267509	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q12a	L1	L1	L1FLnI	chr19	28102400	28112455	+	noncoding	AC010511.1	lncRNA	SENSE	ENSG00000267509	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q12b	L1	L1	L1FLnI	chr19	28174084	28184123	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC010511.1	ENSG00000267509	48654	AC020905.1	ENSG00000266928	109970	None	None
L1FLnI_19q12c	L1	L1	L1FLnI	chr19	28174084	28184146	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC010511.1	ENSG00000267509	48654	AC020905.1	ENSG00000266928	109947	None	None
L1FLnI_19q12d	L1	L1	L1FLnI	chr19	28266208	28276228	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC010511.1	ENSG00000267509	140778	AC020905.1	ENSG00000266928	17865	None	None
L1FLnI_19q12e	L1	L1	L1FLnI	chr19	28753383	28763469	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC005524.1	ENSG00000283269	25606	MAN1A2P1	ENSG00000267799	27343	None	None
L1FLnI_19q12f	L1	L1	L1FLnI	chr19	28769023	28777539	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MAN1A2P1	ENSG00000267799	13273	AC005524.1	ENSG00000283269	41246	None	None
L1FLnI_19q12g	L1	L1	L1FLnI	chr19	28795208	28804540	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAN1A2P1	ENSG00000267799	2337	AC007795.1	ENSG00000267617	64967	None	None
L1FLnI_19q12h	L1	L1	L1FLnI	chr19	29129111	29139243	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC011505.1	ENSG00000288017	36080	UQCRFS1	ENSG00000169021	66077	None	None
L1ORF2_19q12	L1	L1	L1ORF2	chr19	29224779	29232820	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC007786.3	ENSG00000276631	1642	RN7SL340P	ENSG00000241604	270	None	None
L1FLnI_19q12i	L1	L1	L1FLnI	chr19	29249145	29259125	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC007786.4	ENSG00000287272	9851	RN7SL340P	ENSG00000241604	15760	None	None
L1FLnI_19q12j	L1	L1	L1FLnI	chr19	29249161	29259125	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC007786.4	ENSG00000287272	9851	RN7SL340P	ENSG00000241604	15776	None	None
L1FLnI_19q12k	L1	L1	L1FLnI	chr19	29340073	29348587	+	noncoding	AC011474.1	lncRNA	ANTISENSE	ENSG00000264515	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q12l	L1	L1	L1FLnI	chr19	29344851	29354973	+	coding	AC011474.1	lncRNA	ANTISENSE	ENSG00000264515	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q12m	L1	L1	L1FLnI	chr19	29352752	29361398	+	noncoding	AC011474.1	lncRNA	ANTISENSE	ENSG00000264515	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q12n	L1	L1	L1FLnI	chr19	29455792	29465688	+	coding	AC011474.1	lncRNA	ANTISENSE	ENSG00000264515	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q12o	L1	L1	L1FLnI	chr19	29548851	29557917	+	noncoding	VSTM2B	protein_coding	SENSE	ENSG00000187135	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q12p	L1	L1	L1FLnI	chr19	30030140	30038777	-	noncoding	TAF9P3,AC008507.1	processed_pseudogene,processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000267692,ENSG00000266910	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q12q	L1	L1	L1FLnI	chr19	30184162	30194258	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC005597.1	ENSG00000267223	25408	AC008507.5	ENSG00000288072	98269	None	None
L1FLnI_19q13.11a	L1	L1	L1FLnI	chr19	32587014	32597095	-	coding	PDCD5,ANKRD27	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000105185,ENSG00000105186	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q13.11b	L1	L1	L1FLnI	chr19	32842539	32852682	+	coding	SLC7A9	protein_coding	ANTISENSE	ENSG00000021488	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q13.11c	L1	L1	L1FLnI	chr19	34561692	34572179	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SCGB1B2P	ENSG00000268751	4554	ZNF807P	ENSG00000248830	16297	None	None
L1FLnI_19q13.11d	L1	L1	L1FLnI	chr19	34621636	34631771	+	noncoding	SCGB2B2	protein_coding	ANTISENSE	ENSG00000205209	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q13.11e	L1	L1	L1FLnI	chr19	34699883	34709994	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC020910.5	ENSG00000274104	23304	ZNF302	ENSG00000089335	13486	None	None
L1FLnI_19q13.11f	L1	L1	L1FLnI	chr19	34856679	34866713	+	coding	AC008555.2,AC008555.4,AC008555.3	lncRNA,lncRNA,processed_pseudogene	SENSE,ANTISENSE,SENSE	ENSG00000269086,ENSG00000271109,ENSG00000270624	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q13.12a	L1	L1	L1FLnI	chr19	36697425	36707566	-	coding	ZNF567	protein_coding	ANTISENSE	ENSG00000189042	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q13.12b	L1	L1	L1FLnI	chr19	37048223	37058003	-	noncoding	ZNF420	protein_coding	ANTISENSE	ENSG00000197050	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr19:37056960-37057102	None
L1FLnI_19q13.12c	L1	L1	L1FLnI	chr19	37112971	37123125	+	coding	ZNF420,AC012309.1,ZNF585A	protein_coding,protein_coding,protein_coding	SENSE,ANTISENSE,ANTISENSE	ENSG00000197050,ENSG00000267360,ENSG00000196967	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_19q13.13	L1	L1	L1ORF2	chr19	37836501	37844547	+	coding	AC016582.1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000225868	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q13.2a	L1	L1	L1FLnI	chr19	39617995	39628131	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005176.2	ENSG00000269519	3169	LGALS13	ENSG00000105198	10521	None	None
L1FLnI_19q13.2b	L1	L1	L1FLnI	chr19	39645714	39655743	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS29P30	ENSG00000268243	1102	LGALS16	ENSG00000249861	170	None	None
L1FLnI_19q13.2c	L1	L1	L1FLnI	chr19	39713450	39723592	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC006133.1	ENSG00000278813	2438	LGALS14	ENSG00000006659	4006	None	None
L1FLnI_19q13.2d	L1	L1	L1FLnI	chr19	40037417	40047554	-	coding	ZNF780B	protein_coding	SENSE	ENSG00000128000	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chr19:40037564-40037880	None
L1FLnI_19q13.2e	L1	L1	L1FLnI	chr19	40909209	40918497	+	coding	CYP2G1P,CYP2A7P2	transcribed_unprocessed_pseudogene,unprocessed_pseudogene	SENSE,ANTISENSE	ENSG00000130612,ENSG00000198251	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q13.2f	L1	L1	L1FLnI	chr19	41482864	41493019	+	coding	PCAT19	lncRNA	ANTISENSE	ENSG00000267107	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q13.2g	L1	L1	L1FLnI	chr19	41653298	41663667	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC243960.4	ENSG00000268582	335	CEACAM7	ENSG00000007306	9636	None	None
L1FLnI_19q13.2h	L1	L1	L1FLnI	chr19	42710870	42720806	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS10P28	ENSG00000243167	40054	PSG3	ENSG00000221826	832	None	None
L1FLnI_19q13.2i	L1	L1	L1FLnI	chr19	42743462	42753352	-	coding	PSG8	protein_coding	SENSE	ENSG00000124467	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q13.2j	L1	L1	L1FLnI	chr19	42768604	42778611	-	coding	PSG8	protein_coding	SENSE	ENSG00000124467	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q13.31a	L1	L1	L1FLnI	chr19	43241554	43251605	-	coding	PSG9,CEACAMP10	protein_coding,transcribed_processed_pseudogene	SENSE,SENSE	ENSG00000183668,ENSG00000241104	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q13.31b	L1	L1	L1FLnI	chr19	43966150	43975258	+	noncoding	ZNF221,ZNF155	protein_coding,protein_coding	SENSE,SENSE	ENSG00000159905,ENSG00000204920	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q13.31c	L1	L1	L1FLnI	chr19	44120678	44131067	-	coding	AC021092.2	protein_coding	ANTISENSE	ENSG00000256294	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q13.31d	L1	L1	L1FLnI	chr19	44220715	44230425	-	coding	ZNF227,ZNF235	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000131115,ENSG00000159917	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q13.31e	L1	L1	L1FLnI	chr19	44318042	44326862	-	noncoding	ZNF112	protein_coding	SENSE	ENSG00000062370	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	chr19:44320484-44320874,chr19:44321393-44321795,chr19:44323769-44323888	None
L1FLnI_19q13.42a	L1	L1	L1FLnI	chr19	53205438	53214263	-	noncoding	AC092070.2	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000269001	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q13.42b	L1	L1	L1FLnI	chr19	54579702	54589400	-	coding	LILRA2	protein_coding	ANTISENSE	ENSG00000239998	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q13.43a	L1	L1	L1FLnI	chr19	55818903	55828929	+	coding	NLRP11	protein_coding	ANTISENSE	ENSG00000179873	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q13.43b	L1	L1	L1FLnI	chr19	55912238	55921740	+	noncoding	NLRP13	protein_coding	ANTISENSE	ENSG00000173572	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_19q13.43c	L1	L1	L1FLnI	chr19	55912238	55921388	+	noncoding	NLRP13	protein_coding	ANTISENSE	ENSG00000173572	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p13a	L1	L1	L1FLnI	chr20	99652	110133	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DEFB125	ENSG00000178591	2558	DEFB126	ENSG00000125788	32457	None	None
L1FLnI_20p13b	L1	L1	L1FLnI	chr20	126466	136490	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	DEFB125	ENSG00000178591	29372	DEFB126	ENSG00000125788	6100	None	None
L1FLnI_20p13c	L1	L1	L1FLnI	chr20	126466	136510	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	DEFB125	ENSG00000178591	29372	DEFB126	ENSG00000125788	6080	None	None
L1FLnI_20p13d	L1	L1	L1FLnI	chr20	1213283	1221972	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	C20orf202	ENSG00000215595	5004	RAD21L1	ENSG00000244588	4084	None	None
L1FLnI_20p13e	L1	L1	L1FLnI	chr20	1213283	1221843	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	C20orf202	ENSG00000215595	5004	RAD21L1	ENSG00000244588	4213	None	None
L1FLnI_20p13f	L1	L1	L1FLnI	chr20	1540146	1549831	-	coding	AL049634.1,SIRPD,AL049634.2	unprocessed_pseudogene,protein_coding,protein_coding	SENSE,SENSE,SENSE	ENSG00000242324,ENSG00000125900,ENSG00000260861	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p13g	L1	L1	L1FLnI	chr20	1638104	1648501	-	noncoding	SIRPG,SIRPG-AS1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000089012,ENSG00000237914	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p13h	L1	L1	L1FLnI	chr20	2260949	2271106	+	noncoding	AL121899.2	protein_coding	SENSE	ENSG00000286022	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p13i	L1	L1	L1FLnI	chr20	2497327	2507458	+	coding	AL049650.2,ZNF343	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000256566,ENSG00000088876	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p13j	L1	L1	L1FLnI	chr20	3518846	3528581	+	noncoding	ATRN	protein_coding	SENSE	ENSG00000088812	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p13k	L1	L1	L1FLnI	chr20	4283222	4293381	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL139350.1	ENSG00000236387	128805	ADRA1D	ENSG00000171873	33935	None	None
L1FLnI_20p13l	L1	L1	L1FLnI	chr20	4283236	4293381	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL139350.1	ENSG00000236387	128805	ADRA1D	ENSG00000171873	33949	None	None
L1FLnI_20p13m	L1	L1	L1FLnI	chr20	4495309	4505464	-	noncoding	AL121781.1	lncRNA	ANTISENSE	ENSG00000238282	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p12.3a	L1	L1	L1FLnI	chr20	5235264	5245679	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2D3P1	ENSG00000225022	46709	CDS2	ENSG00000101290	37377	None	None
L1FLnI_20p12.3b	L1	L1	L1FLnI	chr20	5235275	5245679	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2D3P1	ENSG00000225022	46709	CDS2	ENSG00000101290	37388	None	None
L1FLnI_20p12.3c	L1	L1	L1FLnI	chr20	5244977	5254593	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2D3P1	ENSG00000225022	37795	CDS2	ENSG00000101290	47090	None	None
L1FLnI_20p12.3d	L1	L1	L1FLnI	chr20	5458033	5467327	-	noncoding	AL121757.2,LINC00658,AL121757.1	lncRNA,lncRNA,lncRNA	ANTISENSE,SENSE,ANTISENSE	ENSG00000266908,ENSG00000226995,ENSG00000230563	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p12.3e	L1	L1	L1FLnI	chr20	6315323	6325344	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CASC20	ENSG00000229876	121379	AL109618.3	ENSG00000276915	94564	None	None
L1FLnI_20p12.3f	L1	L1	L1FLnI	chr20	6327221	6337560	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CASC20	ENSG00000229876	109163	AL109618.3	ENSG00000276915	106462	None	None
L1FLnI_20p12.3g	L1	L1	L1FLnI	chr20	7092666	7102832	+	noncoding	AL096799.1	lncRNA	SENSE	ENSG00000232271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_20p12.3	L1	L1	L1FLI	chr20	7115169	7123202	-	coding	AL096799.1	lncRNA	ANTISENSE	ENSG00000232271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p12.3h	L1	L1	L1FLnI	chr20	7464991	7473582	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL547P	ENSG00000240584	159980	MIR8062	ENSG00000278159	93299	None	None
L1FLnI_20p12.3i	L1	L1	L1FLnI	chr20	7598081	7607883	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR8062	ENSG00000278159	226389	RN7SL547P	ENSG00000240584	25679	None	None
L1FLnI_20p12.3j	L1	L1	L1FLnI	chr20	7944454	7953695	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMX4	ENSG00000125827	23651	HAO1	ENSG00000101323	3996	None	None
L1FLnI_20p12.3k	L1	L1	L1FLnI	chr20	7951071	7959699	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMX4	ENSG00000125827	17647	HAO1	ENSG00000101323	10613	None	None
L1FLnI_20p12.3l	L1	L1	L1FLnI	chr20	8083708	8093757	-	coding	PLCB1	protein_coding	ANTISENSE	ENSG00000182621	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p12.3m	L1	L1	L1FLnI	chr20	8108368	8118417	-	coding	PLCB1	protein_coding	ANTISENSE	ENSG00000182621	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p12.3n	L1	L1	L1FLnI	chr20	8594603	8604627	-	coding	PLCB1	protein_coding	ANTISENSE	ENSG00000182621	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p12.2a	L1	L1	L1FLnI	chr20	9457789	9467937	+	coding	PLCB4	protein_coding	SENSE	ENSG00000101333	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr20:9458570-9458851	None
L1FLnI_20p12.2b	L1	L1	L1FLnI	chr20	9457789	9467955	+	coding	PLCB4	protein_coding	SENSE	ENSG00000101333	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr20:9458570-9458851	None
L1FLnI_20p12.2c	L1	L1	L1FLnI	chr20	11146212	11156716	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL049649.1	ENSG00000230990	77454	C20orf187	ENSG00000125899	116757	None	None
L1FLnI_20p12.2d	L1	L1	L1FLnI	chr20	11463065	11473780	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL109837.2	ENSG00000282478	62626	RPS11P1	ENSG00000235544	117210	None	None
L1ORF2_20p12.2	L1	L1	L1ORF2	chr20	11631775	11639820	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PGAM3P	ENSG00000237256	10298	AL161938.1	ENSG00000261411	45324	None	None
L1FLnI_20p12.2e	L1	L1	L1FLnI	chr20	11724708	11734697	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161938.1	ENSG00000261411	37385	LINC00687	ENSG00000228422	65766	None	None
L1FLnI_20p12.1a	L1	L1	L1FLnI	chr20	12123213	12133200	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL109838.1	ENSG00000235292	110108	BTBD3	ENSG00000132640	196604	chr20:12130119-12130314	None
L1FLnI_20p12.1b	L1	L1	L1FLnI	chr20	12272069	12283008	+	noncoding	AL109838.1	lncRNA	ANTISENSE	ENSG00000235292	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p12.1c	L1	L1	L1FLnI	chr20	12422179	12430744	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01722	ENSG00000233048	434458	PA2G4P2	ENSG00000235698	40924	None	None
L1FLnI_20p12.1d	L1	L1	L1FLnI	chr20	12441973	12452640	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01722	ENSG00000233048	412562	PA2G4P2	ENSG00000235698	60718	None	None
L1FLnI_20p12.1e	L1	L1	L1FLnI	chr20	12488126	12498242	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PA2G4P2	ENSG00000235698	106871	LINC01722	ENSG00000233048	366960	None	None
L1FLnI_20p12.1f	L1	L1	L1FLnI	chr20	12579009	12589031	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PA2G4P2	ENSG00000235698	197754	LINC01722	ENSG00000233048	276171	None	None
L1FLnI_20p12.1g	L1	L1	L1FLnI	chr20	12659264	12668755	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PA2G4P2	ENSG00000235698	278009	LINC01722	ENSG00000233048	196447	None	chr20:12662990-12662992
L1FLI_20p12.1	L1	L1	L1FLI	chr20	12800003	12808049	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01722	ENSG00000233048	57153	PA2G4P2	ENSG00000235698	418748	None	None
L1FLnI_20p12.1h	L1	L1	L1FLnI	chr20	13310156	13319699	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ISM1	ENSG00000101230	9505	AL121782.1	ENSG00000278153	48592	None	None
L1FLnI_20p12.1i	L1	L1	L1FLnI	chr20	13374575	13385027	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TASP1	ENSG00000089123	4365	AL121782.1	ENSG00000278153	5872	None	None
L1FLnI_20p12.1j	L1	L1	L1FLnI	chr20	13374587	13385027	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TASP1	ENSG00000089123	4365	AL121782.1	ENSG00000278153	5884	None	None
L1FLnI_20p12.1k	L1	L1	L1FLnI	chr20	13499210	13507750	+	noncoding	TASP1	protein_coding	ANTISENSE	ENSG00000089123	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p12.1l	L1	L1	L1FLnI	chr20	14021950	14032358	-	coding	MACROD2	protein_coding	ANTISENSE	ENSG00000172264	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p12.1m	L1	L1	L1FLnI	chr20	14101594	14113015	+	noncoding	MACROD2	protein_coding	SENSE	ENSG00000172264	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p12.1n	L1	L1	L1FLnI	chr20	14267213	14277137	+	coding	MACROD2	protein_coding	SENSE	ENSG00000172264	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr20:14268095-14268394	chr20:14268095-14268099
L1FLnI_20p12.1o	L1	L1	L1FLnI	chr20	14461004	14471175	-	coding	MACROD2	protein_coding	ANTISENSE	ENSG00000172264	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chr20:14467715-14467751
L1FLnI_20p12.1p	L1	L1	L1FLnI	chr20	14802656	14813079	+	noncoding	MACROD2	protein_coding	SENSE	ENSG00000172264	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p12.1q	L1	L1	L1FLnI	chr20	16077861	16087678	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MACROD2	ENSG00000172264	24664	AL161941.1	ENSG00000287410	90255	None	None
L1FLnI_20p12.1r	L1	L1	L1FLnI	chr20	16787341	16797485	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121892.1	ENSG00000236985	60477	OTOR	ENSG00000125879	17279	None	chr20:16793179-16793183
L1FLnI_20p12.1s	L1	L1	L1FLnI	chr20	16817949	16826625	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	OTOR	ENSG00000125879	47887	AL121892.1	ENSG00000236985	31337	None	None
L1FLnI_20p12.1t	L1	L1	L1FLnI	chr20	16906939	16917077	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL031684.1	ENSG00000212165	65754	AL121892.1	ENSG00000236985	42791	None	None
L1FLnI_20p12.1u	L1	L1	L1FLnI	chr20	16926859	16937120	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121892.1	ENSG00000236985	62711	AL031684.1	ENSG00000212165	45711	None	None
L1FLnI_20p12.1v	L1	L1	L1FLnI	chr20	17114292	17124418	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-27P	ENSG00000251955	63092	AL031684.1	ENSG00000212165	131259	None	None
L1FLnI_20p12.1w	L1	L1	L1FLnI	chr20	17407617	17417683	+	coding	PCSK2	protein_coding	SENSE	ENSG00000125851	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p11.23a	L1	L1	L1FLnI	chr20	18329414	18339588	+	coding	AL049646.1	lncRNA	ANTISENSE	ENSG00000230010	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p11.23b	L1	L1	L1FLnI	chr20	18329414	18339578	+	coding	AL049646.1	lncRNA	ANTISENSE	ENSG00000230010	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p11.23c	L1	L1	L1FLnI	chr20	18598025	18607439	+	coding	AL121900.1,DTD1	protein_coding,protein_coding	SENSE,SENSE	ENSG00000284776,ENSG00000125821	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p11.23d	L1	L1	L1FLnI	chr20	18754772	18764870	-	coding	DTD1	protein_coding	ANTISENSE	ENSG00000125821	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p11.23e	L1	L1	L1FLnI	chr20	18860718	18870849	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL135936.1	ENSG00000274863	129860	C20orf78	ENSG00000149443	30565	None	None
L1FLnI_20p11.23f	L1	L1	L1FLnI	chr20	18866928	18877354	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL135936.1	ENSG00000274863	123355	C20orf78	ENSG00000149443	36775	None	None
L1FLnI_20p11.23g	L1	L1	L1FLnI	chr20	18873365	18883662	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL135936.1	ENSG00000274863	117047	C20orf78	ENSG00000149443	43212	None	None
L1FLnI_20p11.23h	L1	L1	L1FLnI	chr20	18935346	18945812	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL135936.1	ENSG00000274863	54897	C20orf78	ENSG00000149443	105193	None	None
L1FLnI_20p11.23i	L1	L1	L1FLnI	chr20	19053115	19063115	+	noncoding	AL135936.1	lncRNA	ANTISENSE	ENSG00000274863	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr20:19055742-19055788	None
L1FLnI_20p11.23j	L1	L1	L1FLnI	chr20	19161147	19171312	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136090.2	ENSG00000287430	37340	AL135936.1	ENSG00000274863	104351	None	None
L1FLnI_20p11.23k	L1	L1	L1FLnI	chr20	20121955	20132217	-	noncoding	CFAP61	protein_coding	ANTISENSE	ENSG00000089101	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p11.22a	L1	L1	L1FLnI	chr20	21410029	21419177	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL158013.1	ENSG00000225280	9638	RN7SKP140	ENSG00000223128	5581	None	None
L1FLnI_20p11.22b	L1	L1	L1FLnI	chr20	21733461	21743391	-	noncoding	SLC25A6P1	processed_pseudogene	SENSE	ENSG00000233015	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p11.22c	L1	L1	L1FLnI	chr20	21745193	21754591	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL41P1	ENSG00000227063	679	SLC25A6P1	ENSG00000233015	2116	None	None
L1FLnI_20p11.22d	L1	L1	L1FLnI	chr20	21840505	21849238	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL41P1	ENSG00000227063	85155	AL109807.1	ENSG00000238034	98409	None	None
L1FLnI_20p11.22e	L1	L1	L1FLnI	chr20	21877377	21887450	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL109807.1	ENSG00000238034	60197	RPL41P1	ENSG00000227063	122027	None	None
L1FLnI_20p11.22f	L1	L1	L1FLnI	chr20	21884157	21894185	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL41P1	ENSG00000227063	128807	AL109807.1	ENSG00000238034	53462	None	None
L1FLnI_20p11.22g	L1	L1	L1FLnI	chr20	21910355	21920381	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL109807.1	ENSG00000238034	27266	RPL41P1	ENSG00000227063	155005	None	None
L1FLnI_20p11.22h	L1	L1	L1FLnI	chr20	21950458	21961372	-	noncoding	AL109807.1	lncRNA	ANTISENSE	ENSG00000238034	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p11.22i	L1	L1	L1FLnI	chr20	22005934	22016096	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL109807.1	ENSG00000238034	35151	LINC01432	ENSG00000234435	37978	None	None
L1FLnI_20p11.22j	L1	L1	L1FLnI	chr20	22039966	22050114	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01432	ENSG00000234435	3960	AL109807.1	ENSG00000238034	69183	None	None
L1FLnI_20p11.22k	L1	L1	L1FLnI	chr20	22111138	22119781	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01432	ENSG00000234435	36484	AL035258.1	ENSG00000234862	100773	None	None
L1FLnI_20p11.22l	L1	L1	L1FLnI	chr20	22171976	22180607	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL035258.1	ENSG00000234862	39947	LINC01432	ENSG00000234435	97322	None	None
L1FLnI_20p11.22m	L1	L1	L1FLnI	chr20	22190633	22200773	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01432	ENSG00000234435	115979	AL035258.1	ENSG00000234862	19781	None	None
L1FLnI_20p11.21a	L1	L1	L1FLnI	chr20	22731171	22741285	+	coding	AL158175.1,KRT18P3	lncRNA,processed_pseudogene	SENSE,ANTISENSE	ENSG00000283072,ENSG00000215553	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p11.21b	L1	L1	L1FLnI	chr20	22848314	22858281	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158175.1	ENSG00000283072	101323	CYB5AP4	ENSG00000213882	27389	None	None
L1FLnI_20p11.21c	L1	L1	L1FLnI	chr20	22963184	22973702	+	noncoding	AL353132.1	processed_pseudogene	ANTISENSE	ENSG00000228935	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p11.21d	L1	L1	L1FLnI	chr20	22987094	22997220	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL049651.1	ENSG00000230492	12989	AL353132.1	ENSG00000228935	21031	None	None
L1FLnI_20p11.21e	L1	L1	L1FLnI	chr20	23217014	23226422	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390037.1	ENSG00000277901	94536	AL118508.1	ENSG00000230387	26595	chr20:23225398-23225668	None
L1FLnI_20p11.21f	L1	L1	L1FLnI	chr20	23422610	23432640	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NAPB	ENSG00000125814	1091	CSTL1	ENSG00000125823	7045	None	None
L1FLnI_20p11.21g	L1	L1	L1FLnI	chr20	23575003	23583874	-	noncoding	CST9LP2	unprocessed_pseudogene	ANTISENSE	ENSG00000204658	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p11.21h	L1	L1	L1FLnI	chr20	23585810	23595811	+	coding	CST9LP2	unprocessed_pseudogene	SENSE	ENSG00000204658	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr20:23586960-23587338	None
L1FLnI_20p11.21i	L1	L1	L1FLnI	chr20	23614839	23624966	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CST3	ENSG00000101439	1740	CST9	ENSG00000173335	8963	None	None
L1FLnI_20p11.21j	L1	L1	L1FLnI	chr20	23831962	23842128	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CST2	ENSG00000170369	5233	CST5	ENSG00000170367	33806	None	None
L1FLnI_20p11.21k	L1	L1	L1FLnI	chr20	23896352	23906506	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CSTP1	ENSG00000228476	12032	CST5	ENSG00000170367	16604	None	None
L1FLnI_20p11.21l	L1	L1	L1FLnI	chr20	23896353	23906506	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CSTP1	ENSG00000228476	12032	CST5	ENSG00000170367	16605	None	None
L1FLnI_20p11.21m	L1	L1	L1FLnI	chr20	23903855	23914551	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CSTP1	ENSG00000228476	3987	CST5	ENSG00000170367	24107	None	None
L1FLnI_20p11.21n	L1	L1	L1FLnI	chr20	23905068	23914551	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CSTP1	ENSG00000228476	3987	CST5	ENSG00000170367	25320	None	None
L1FLnI_20p11.21o	L1	L1	L1FLnI	chr20	24551815	24561370	-	coding	SYNDIG1	protein_coding	ANTISENSE	ENSG00000101463	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_20p11.21	L1	L1	L1ORF2	chr20	24899602	24907638	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL049594.1	ENSG00000231015	218611	AL035661.1	ENSG00000274173	24202	None	None
L1FLnI_20p11.21p	L1	L1	L1FLnI	chr20	24918225	24928409	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL049594.1	ENSG00000231015	237234	AL035661.1	ENSG00000274173	3431	None	None
L1FLnI_20p11.21q	L1	L1	L1FLnI	chr20	24940590	24949408	+	noncoding	CST7	protein_coding	SENSE	ENSG00000077984	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr20:24949256-24949282,chr20:24949299-24949328
L1FLnI_20p11.21r	L1	L1	L1FLnI	chr20	25101754	25111537	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL080312.1	ENSG00000225069	1826	AL035252.3	ENSG00000230725	28115	None	None
L1FLnI_20p11.21s	L1	L1	L1FLnI	chr20	25162138	25170695	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL035252.2	ENSG00000225344	77	AL035252.6	ENSG00000286472	13963	None	None
L1FLnI_20p11.21t	L1	L1	L1FLnI	chr20	25180349	25190490	-	coding	AL035252.6	lncRNA	SENSE	ENSG00000286472	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p11.21u	L1	L1	L1FLnI	chr20	25257007	25265739	+	coding	PYGB	protein_coding	SENSE	ENSG00000100994	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p11.21v	L1	L1	L1FLnI	chr20	25326451	25336470	+	noncoding	ABHD12	protein_coding	ANTISENSE	ENSG00000100997	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p11.1a	L1	L1	L1FLnI	chr20	25700217	25710661	-	coding	AL390198.1	lncRNA	ANTISENSE	ENSG00000226465	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p11.1b	L1	L1	L1FLnI	chr20	25707998	25717150	-	coding	AL390198.1	lncRNA	ANTISENSE	ENSG00000226465	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p11.1c	L1	L1	L1FLnI	chr20	25713158	25723313	-	coding	AL390198.1	lncRNA	ANTISENSE	ENSG00000226465	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20p11.1d	L1	L1	L1FLnI	chr20	26230179	26240209	+	coding	MIR663AHG	lncRNA	ANTISENSE	ENSG00000227195	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20q11.1a	L1	L1	L1FLnI	chr20	28733157	28742990	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FRG1CP	ENSG00000282826	130314	FRG1DP	ENSG00000282870	337400	None	None
L1FLnI_20q11.1b	L1	L1	L1FLnI	chr20	28733157	28743004	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FRG1CP	ENSG00000282826	130314	FRG1DP	ENSG00000282870	337386	None	None
L1FLnI_20q11.1c	L1	L1	L1FLnI	chr20	28787816	28797915	-	NA	None	NA	NA	None	INTERGENIC	NA	NA	FRG1DP	ENSG00000282870	282475	FRG1CP	ENSG00000282826	184973	None	None
L1FLnI_20q11.1d	L1	L1	L1FLnI	chr20	29230395	29238991	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FRG1DP	ENSG00000282870	127634	ABBA01031658.1	ENSG00000283568	58104	None	None
L1FLnI_20q11.1e	L1	L1	L1FLnI	chr20	29326992	29337115	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DUX4L33	ENSG00000282894	1943	DUX4L34	ENSG00000282935	73233	None	None
L1FLnI_20q11.1f	L1	L1	L1FLnI	chr20	29365561	29375720	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DUX4L34	ENSG00000282935	34628	DUX4L33	ENSG00000282894	40512	None	None
L1FLnI_20q11.1g	L1	L1	L1FLnI	chr20	29465657	29475788	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	FRG1EP	ENSG00000282995	4359	DUX4L35	ENSG00000282911	16351	None	None
L1FLnI_20q11.1h	L1	L1	L1FLnI	chr20	29522408	29532426	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FRG1EP	ENSG00000282995	25229	FAM242B	ENSG00000287889	16235	None	None
L1FLnI_20q11.1i	L1	L1	L1FLnI	chr20	29764207	29774360	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CDC27P3	ENSG00000283005	16117	RNA5SP532	ENSG00000283433	99699	None	None
L1FLnI_20q11.1j	L1	L1	L1FLnI	chr20	29813237	29821869	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CDC27P3	ENSG00000283005	65147	RNA5SP532	ENSG00000283433	52190	None	None
L1FLnI_20q11.21a	L1	L1	L1FLnI	chr20	30831336	30839969	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DEFB115	ENSG00000215547	417695	RNA5SP528	ENSG00000275305	15062	None	None
L1FLnI_20q11.21b	L1	L1	L1FLnI	chr20	30882378	30892527	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DEFB115	ENSG00000215547	365137	RNA5SP528	ENSG00000275305	66104	None	None
L1FLnI_20q11.21c	L1	L1	L1FLnI	chr20	30943612	30953640	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DEFB115	ENSG00000215547	304024	RNA5SP528	ENSG00000275305	127338	None	None
L1FLnI_20q11.21d	L1	L1	L1FLnI	chr20	30943614	30953640	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DEFB115	ENSG00000215547	304024	RNA5SP528	ENSG00000275305	127340	None	None
L1FLnI_20q11.21e	L1	L1	L1FLnI	chr20	30969957	30979971	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DEFB115	ENSG00000215547	277693	RNA5SP528	ENSG00000275305	153683	None	None
L1FLnI_20q11.21f	L1	L1	L1FLnI	chr20	30981957	30991964	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP528	ENSG00000275305	165683	DEFB115	ENSG00000215547	265700	None	None
L1FLnI_20q11.21g	L1	L1	L1FLnI	chr20	31262547	31272087	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DKKL1P1	ENSG00000215546	2083	DEFB115	ENSG00000215547	2915	None	None
L1FLnI_20q11.21h	L1	L1	L1FLnI	chr20	31329217	31339362	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL31P3	ENSG00000237929	17255	HAUS6P2	ENSG00000236121	2009	None	None
L1FLnI_20q11.22	L1	L1	L1FLnI	chr20	35070785	35080892	-	coding	TRPC4AP	protein_coding	SENSE	ENSG00000100991	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20q12a	L1	L1	L1FLnI	chr20	39364730	39373984	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL680P	ENSG00000275337	15338	AL132981.1	ENSG00000286083	281341	None	None
L1FLnI_20q12b	L1	L1	L1FLnI	chr20	39968660	39979070	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01370	ENSG00000237767	25146	HSPE1P1	ENSG00000234878	35421	None	None
L1FLnI_20q12c	L1	L1	L1FLnI	chr20	40344364	40353094	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL009050.1	ENSG00000223410	218007	MAFB	ENSG00000204103	332754	None	None
L1FLnI_20q12d	L1	L1	L1FLnI	chr20	40615824	40625856	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL009050.1	ENSG00000223410	489467	MAFB	ENSG00000204103	59992	None	None
L1FLnI_20q12e	L1	L1	L1FLnI	chr20	40975675	40984516	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU2-52P	ENSG00000222612	39689	RNA5SP484	ENSG00000238908	121446	None	chr20:40980706-40980722,chr20:40980724-40980737,chr20:40980747-40980773
L1FLnI_20q12f	L1	L1	L1FLnI	chr20	41800799	41810897	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL049812.2	ENSG00000225458	180243	AL133229.1	ENSG00000212224	88199	None	None
L1FLnI_20q12g	L1	L1	L1FLnI	chr20	42202771	42212817	+	coding	PTPRT	protein_coding	ANTISENSE	ENSG00000196090	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20q12h	L1	L1	L1FLnI	chr20	42614439	42624467	-	coding	PTPRT	protein_coding	SENSE	ENSG00000196090	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20q12i	L1	L1	L1FLnI	chr20	42814182	42824006	+	noncoding	PTPRT	protein_coding	ANTISENSE	ENSG00000196090	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20q12j	L1	L1	L1FLnI	chr20	42814857	42824006	+	noncoding	PTPRT	protein_coding	ANTISENSE	ENSG00000196090	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20q13.12a	L1	L1	L1FLnI	chr20	43810963	43820991	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-639P	ENSG00000206801	14420	LINC01728	ENSG00000233277	73729	None	None
L1FLnI_20q13.12b	L1	L1	L1FLnI	chr20	43870651	43880771	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01728	ENSG00000233277	13949	RNU6-639P	ENSG00000206801	74108	None	None
L1FLnI_20q13.12c	L1	L1	L1FLnI	chr20	43870667	43880771	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01728	ENSG00000233277	13949	RNU6-639P	ENSG00000206801	74124	None	None
L1FLnI_20q13.12d	L1	L1	L1FLnI	chr20	44054688	44064618	+	noncoding	TOX2	protein_coding	SENSE	ENSG00000124191	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20q13.12e	L1	L1	L1FLnI	chr20	45471621	45482114	-	noncoding	WFDC2	protein_coding	ANTISENSE	ENSG00000101443	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	chr20:45479944-45479956,chr20:45479963-45479977,chr20:45481467-45481491,chr20:45481493-45481502
L1FLnI_20q13.12f	L1	L1	L1FLnI	chr20	45647983	45658093	+	coding	WFDC11	protein_coding	ANTISENSE	ENSG00000180083	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20q13.12g	L1	L1	L1FLnI	chr20	45659916	45670059	-	coding	WFDC11	protein_coding	SENSE	ENSG00000180083	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20q13.12h	L1	L1	L1FLnI	chr20	45687377	45697481	-	coding	WFDC10B	protein_coding	SENSE	ENSG00000182931	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20q13.12i	L1	L1	L1FLnI	chr20	45687393	45697481	-	coding	WFDC10B	protein_coding	SENSE	ENSG00000182931	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20q13.13	L1	L1	L1FLnI	chr20	48976479	48986633	-	coding	ARFGEF2	protein_coding	ANTISENSE	ENSG00000124198	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20q13.2a	L1	L1	L1FLnI	chr20	52500827	52510351	+	noncoding	LINC01524	lncRNA	SENSE	ENSG00000234948	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20q13.2b	L1	L1	L1FLnI	chr20	52554325	52564955	-	coding	LINC01524	lncRNA	ANTISENSE	ENSG00000234948	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20q13.2c	L1	L1	L1FLnI	chr20	53455064	53465066	-	coding	TSHZ2,AL109930.1,AL354993.2	protein_coding,lncRNA,lncRNA	ANTISENSE,SENSE,SENSE	ENSG00000182463,ENSG00000271774,ENSG00000259723	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20q13.2d	L1	L1	L1FLnI	chr20	53469146	53479179	+	coding	TSHZ2,AL109930.1,AL354993.2	protein_coding,lncRNA,lncRNA	SENSE,ANTISENSE,ANTISENSE	ENSG00000182463,ENSG00000271774,ENSG00000259723	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20q13.2e	L1	L1	L1FLnI	chr20	53469146	53479153	+	coding	TSHZ2,AL109930.1,AL354993.2	protein_coding,lncRNA,lncRNA	SENSE,ANTISENSE,ANTISENSE	ENSG00000182463,ENSG00000271774,ENSG00000259723	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20q13.2f	L1	L1	L1FLnI	chr20	53500353	53510374	+	coding	AL354993.2	lncRNA	ANTISENSE	ENSG00000259723	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20q13.2g	L1	L1	L1FLnI	chr20	54779012	54788849	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	DOK5	ENSG00000101134	127843	RNU4ATAC7P	ENSG00000252089	70839	None	None
L1FLnI_20q13.2h	L1	L1	L1FLnI	chr20	54789449	54798905	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU4ATAC7P	ENSG00000252089	60783	DOK5	ENSG00000101134	138280	None	None
L1FLnI_20q13.2i	L1	L1	L1FLnI	chr20	55062154	55071239	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL12P4	ENSG00000185834	3405	RNU4ATAC7P	ENSG00000252089	202342	None	None
L1FLnI_20q13.2j	L1	L1	L1FLnI	chr20	55219806	55229969	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01440	ENSG00000235166	178929	RPL12P4	ENSG00000185834	144666	None	None
L1FLnI_20q13.2k	L1	L1	L1FLnI	chr20	55302087	55311843	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL12P4	ENSG00000185834	226947	LINC01440	ENSG00000235166	97055	None	None
L1FLnI_20q13.2l	L1	L1	L1FLnI	chr20	55856068	55866021	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL109828.1	ENSG00000286006	74837	CBLN4	ENSG00000054803	131336	None	None
L1FLnI_20q13.2m	L1	L1	L1FLnI	chr20	55899731	55909899	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CBLN4	ENSG00000054803	87458	AL109828.1	ENSG00000286006	118500	None	None
L1FLnI_20q13.2n	L1	L1	L1FLnI	chr20	56046069	56056526	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CBLN4	ENSG00000054803	40550	RNA5SP487	ENSG00000222118	148526	None	None
L1FLnI_20q13.32	L1	L1	L1FLnI	chr20	59531279	59541303	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PHACTR3	ENSG00000087495	36206	AL389889.1	ENSG00000227282	15240	None	None
L1FLnI_20q13.33a	L1	L1	L1FLnI	chr20	60014787	60024685	-	noncoding	CDH26	protein_coding	ANTISENSE	ENSG00000124215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_20q13.33b	L1	L1	L1FLnI	chr20	60545574	60555001	-	noncoding	MIR646HG	lncRNA	ANTISENSE	ENSG00000228340	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21p12a	L1	L1	L1FLnI	chr21	5345119	5355271	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC079801.1	ENSG00000279669	101286	LINC01670	ENSG00000279094	143880	None	None
L1FLnI_21p12b	L1	L1	L1FLnI	chr21	5740095	5749182	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CU639417.1	ENSG00000274559	223742	FP236315.1	ENSG00000279064	30639	None	None
L1FLnI_21p12c	L1	L1	L1FLnI	chr21	5860679	5869766	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CU639417.1	ENSG00000274559	103158	FP236315.1	ENSG00000279064	151223	None	None
L1FLnI_21p11.2a	L1	L1	L1FLnI	chr21	7276739	7286891	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CU634019.4	ENSG00000279303	138950	CU633904.3	ENSG00000279647	98167	None	None
L1FLnI_21p11.2b	L1	L1	L1FLnI	chr21	7575296	7584383	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CU633904.1	ENSG00000274484	100802	CTBP2P9	ENSG00000279177	41961	None	None
L1FLnI_21p11.2c	L1	L1	L1FLnI	chr21	8138165	8147252	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FP671120.5	ENSG00000278996	50368	FP671120.6	ENSG00000279967	34459	None	None
L1FLnI_21p11.2d	L1	L1	L1FLnI	chr21	8321210	8330297	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FP236383.3	ENSG00000280441	50346	FP671120.4	ENSG00000277739	64277	None	None
L1FLnI_21p11.2e	L1	L1	L1FLnI	chr21	8766952	8777097	-	noncoding	CR381670.2	lncRNA	SENSE	ENSG00000286033	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21p11.2f	L1	L1	L1FLnI	chr21	8766965	8777097	-	noncoding	CR381670.2	lncRNA	SENSE	ENSG00000286033	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21p11.2g	L1	L1	L1FLnI	chr21	9137576	9146775	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CR381653.1	ENSG00000278932	178238	TEKT4P2	ENSG00000188681	7824	None	None
L1FLnI_21p11.2h	L1	L1	L1FLnI	chr21	9182590	9192719	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CR381653.1	ENSG00000278932	132294	TEKT4P2	ENSG00000188681	52838	None	None
L1FLnI_21p11.2i	L1	L1	L1FLnI	chr21	9262439	9272566	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TEKT4P2	ENSG00000188681	132687	CR381653.1	ENSG00000278932	52447	None	None
L1FLnI_21p11.2j	L1	L1	L1FLnI	chr21	9308105	9317259	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TEKT4P2	ENSG00000188681	178353	CR381653.1	ENSG00000278932	7754	None	None
L1FLnI_21p11.2k	L1	L1	L1FLnI	chr21	9333223	9343373	-	coding	CR381653.1	lncRNA	ANTISENSE	ENSG00000278932	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21p11.2l	L1	L1	L1FLnI	chr21	9952247	9960924	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CR382285.1	ENSG00000270533	14093	AC018692.2	ENSG00000279321	37401	None	None
L1FLnI_21p11.2m	L1	L1	L1FLnI	chr21	10349176	10359328	-	coding	VN1R7P	processed_pseudogene	ANTISENSE	ENSG00000275592	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21p11.2n	L1	L1	L1FLnI	chr21	10627591	10637720	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SLC25A15P4	ENSG00000273872	14212	AF254982.1	ENSG00000276556	2308	None	None
L1FLnI_21p11.2o	L1	L1	L1FLnI	chr21	10736149	10746170	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	IGHV1OR21-1	ENSG00000277282	86314	AP001464.1	ENSG00000229306	2253506	None	None
L1FLnI_21p11.2p	L1	L1	L1FLnI	chr21	10766254	10776288	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	IGHV1OR21-1	ENSG00000277282	116419	AP001464.1	ENSG00000229306	2223388	None	None
L1FLnI_21p11.2q	L1	L1	L1FLnI	chr21	10766254	10776306	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	IGHV1OR21-1	ENSG00000277282	116419	AP001464.1	ENSG00000229306	2223370	None	None
L1FLnI_21q11.2a	L1	L1	L1FLnI	chr21	13128280	13138420	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AJ239321.1	ENSG00000237202	7473	AJ239318.1	ENSG00000280108	166732	None	None
L1FLnI_21q11.2b	L1	L1	L1FLnI	chr21	13128280	13138430	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AJ239321.1	ENSG00000237202	7473	AJ239318.1	ENSG00000280108	166722	None	None
L1FLnI_21q11.2c	L1	L1	L1FLnI	chr21	13989687	13999098	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NF1P3	ENSG00000183249	1829	ANKRD20A11P	ENSG00000215559	9250	None	None
L1FLnI_21q11.2d	L1	L1	L1FLnI	chr21	14163221	14173376	+	coding	LIPI	protein_coding	ANTISENSE	ENSG00000188992	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21q11.2e	L1	L1	L1FLnI	chr21	14323363	14332807	+	noncoding	ABCC13	transcribed_unprocessed_pseudogene	SENSE	ENSG00000243064	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21q11.2f	L1	L1	L1FLnI	chr21	14415893	14425634	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HSPA13	ENSG00000155304	32409	SAMSN1	ENSG00000155307	59594	None	None
L1FLnI_21q11.2g	L1	L1	L1FLnI	chr21	14500382	14509347	+	noncoding	SAMSN1	protein_coding	ANTISENSE	ENSG00000155307	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21q11.2h	L1	L1	L1FLnI	chr21	14617676	14627786	+	coding	SAMSN1	protein_coding	ANTISENSE	ENSG00000155307	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21q11.2i	L1	L1	L1FLnI	chr21	14775403	14785573	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP16	ENSG00000225502	141	AF127577.4	ENSG00000235609	33270	None	None
L1FLnI_21q11.2j	L1	L1	L1FLnI	chr21	14776843	14785595	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP16	ENSG00000225502	1581	AF127577.4	ENSG00000235609	33248	None	None
L1FLnI_21q11.2k	L1	L1	L1FLnI	chr21	14797153	14806757	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP16	ENSG00000225502	21891	AF127577.4	ENSG00000235609	12086	chr21:14798395-14798585	None
L1FLnI_21q11.2l	L1	L1	L1FLnI	chr21	14923584	14933613	+	coding	AF127577.4,AF127577.3	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000235609,ENSG00000235277	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21q11.2m	L1	L1	L1FLnI	chr21	14933379	14943451	-	coding	AF127577.4,AF127577.3	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000235609,ENSG00000235277	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21q21.1a	L1	L1	L1FLnI	chr21	15449332	15458225	-	noncoding	AJ009632.2	lncRNA	SENSE	ENSG00000229425	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21q21.1b	L1	L1	L1FLnI	chr21	15892186	15901780	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	USP25	ENSG00000155313	12117	MIR99AHG	ENSG00000215386	26516	None	None
L1FLnI_21q21.1c	L1	L1	L1FLnI	chr21	15914058	15924235	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR99AHG	ENSG00000215386	4061	USP25	ENSG00000155313	33989	None	None
L1FLnI_21q21.1d	L1	L1	L1FLnI	chr21	15914083	15924235	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR99AHG	ENSG00000215386	4061	USP25	ENSG00000155313	34014	None	None
L1FLnI_21q21.1e	L1	L1	L1FLnI	chr21	16126989	16137146	-	noncoding	MIR99AHG	lncRNA	ANTISENSE	ENSG00000215386	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21q21.1f	L1	L1	L1FLnI	chr21	16220831	16231205	+	coding	MIR99AHG	lncRNA	SENSE	ENSG00000215386	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21q21.1g	L1	L1	L1FLnI	chr21	16875890	16885446	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF212831.1	ENSG00000232886	2199	NEK4P1	ENSG00000225735	325023	None	None
L1FLnI_21q21.1h	L1	L1	L1FLnI	chr21	16875890	16885448	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF212831.1	ENSG00000232886	2199	NEK4P1	ENSG00000225735	325021	None	None
L1FLnI_21q21.1i	L1	L1	L1FLnI	chr21	16937525	16947046	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NEK4P1	ENSG00000225735	263423	AF212831.1	ENSG00000232886	63834	None	None
L1FLnI_21q21.1j	L1	L1	L1FLnI	chr21	16937525	16946192	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NEK4P1	ENSG00000225735	264277	AF212831.1	ENSG00000232886	63834	None	None
L1FLnI_21q21.1k	L1	L1	L1FLnI	chr21	16941723	16950655	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF212831.1	ENSG00000232886	68032	NEK4P1	ENSG00000225735	259814	None	None
L1FLnI_21q21.1l	L1	L1	L1FLnI	chr21	17030654	17040755	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AF212831.1	ENSG00000232886	156963	NEK4P1	ENSG00000225735	169714	None	None
L1FLnI_21q21.1m	L1	L1	L1FLnI	chr21	17087015	17097030	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF212831.1	ENSG00000232886	213324	NEK4P1	ENSG00000225735	113439	None	None
L1FLnI_21q21.1n	L1	L1	L1FLnI	chr21	17149418	17158407	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF212831.1	ENSG00000232886	275727	NEK4P1	ENSG00000225735	52062	None	None
L1FLnI_21q21.1o	L1	L1	L1FLnI	chr21	17160141	17169532	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AF212831.1	ENSG00000232886	286450	NEK4P1	ENSG00000225735	40937	None	None
L1FLnI_21q21.1p	L1	L1	L1FLnI	chr21	17236672	17247138	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NEK4P1	ENSG00000225735	25325	AP000457.1	ENSG00000278181	49081	None	chr21:17236890-17236900
L1FLnI_21q21.1q	L1	L1	L1FLnI	chr21	17267808	17278051	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NEK4P1	ENSG00000225735	56461	AP000457.1	ENSG00000278181	18168	None	None
L1FLnI_21q21.1r	L1	L1	L1FLnI	chr21	17323984	17334014	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP000457.1	ENSG00000278181	27388	RNU6-113P	ENSG00000252462	97533	chr21:17333681-17334045	None
L1FLnI_21q21.1s	L1	L1	L1FLnI	chr21	17323984	17334033	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP000457.1	ENSG00000278181	27388	RNU6-113P	ENSG00000252462	97514	chr21:17333681-17334045	None
L1FLnI_21q21.1t	L1	L1	L1FLnI	chr21	17372540	17382430	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP000457.1	ENSG00000278181	75944	RNU6-113P	ENSG00000252462	49117	None	None
L1FLnI_21q21.1u	L1	L1	L1FLnI	chr21	17682950	17693460	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP000432.2	ENSG00000279648	11948	AP000432.1	ENSG00000226956	22566	None	None
L1FLnI_21q21.1v	L1	L1	L1FLnI	chr21	17684808	17693460	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AP000432.2	ENSG00000279648	11948	AP000432.1	ENSG00000226956	24424	None	None
L1FLnI_21q21.1w	L1	L1	L1FLnI	chr21	17769255	17779704	-	noncoding	C21orf91-OT1	lncRNA	SENSE	ENSG00000240770	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chr21:17775932-17776085,chr21:17779585-17779753	chr21:17775932-17775946
L1FLnI_21q21.1x	L1	L1	L1FLnI	chr21	18834681	18844119	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPIAP22	ENSG00000198618	13660	MIR548XHG	ENSG00000224141	74361	None	None
L1FLnI_21q21.1y	L1	L1	L1FLnI	chr21	18869579	18880408	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL157359.3	ENSG00000279156	36805	PPIAP22	ENSG00000198618	11303	None	None
L1FLnI_21q21.1z	L1	L1	L1FLnI	chr21	19420363	19430809	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-139P	ENSG00000212609	75051	RPL37P4	ENSG00000230198	163032	None	None
L1FLnI_21q21.1aa	L1	L1	L1FLnI	chr21	19501749	19512831	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL37P4	ENSG00000230198	81010	RNU1-139P	ENSG00000212609	156437	None	None
L1FLnI_21q21.1ba	L1	L1	L1FLnI	chr21	20111302	20121570	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02573	ENSG00000233236	135182	LINC01683	ENSG00000233480	211259	None	None
L1FLnI_21q21.1ca	L1	L1	L1FLnI	chr21	20601713	20610847	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001506.1	ENSG00000276738	3550	LINC00320	ENSG00000224924	40603	None	None
L1FLnI_21q21.1da	L1	L1	L1FLnI	chr21	21677176	21686703	-	noncoding	AF241725.1	lncRNA	SENSE	ENSG00000237527	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr21:21686328-21686334
L1FLnI_21q21.1ea	L1	L1	L1FLnI	chr21	22086999	22095963	-	noncoding	LINC01687	lncRNA	SENSE	ENSG00000233215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21q21.1fa	L1	L1	L1FLnI	chr21	22489677	22500132	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAPK6P2	ENSG00000223488	51328	AP000959.1	ENSG00000234034	472	chr21:22499729-22499747	None
L1FLnI_21q21.1ga	L1	L1	L1FLnI	chr21	22531488	22540692	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000959.1	ENSG00000234034	11430	AP000949.1	ENSG00000225906	341890	None	None
L1FLnI_21q21.2a	L1	L1	L1FLnI	chr21	23180929	23189578	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001116.1	ENSG00000230972	49723	RNU2-55P	ENSG00000223078	92158	None	None
L1FLnI_21q21.2b	L1	L1	L1FLnI	chr21	24081566	24092120	+	coding	AP000477.3	lncRNA	ANTISENSE	ENSG00000287801	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21q21.2c	L1	L1	L1FLnI	chr21	24081566	24090350	+	coding	AP000477.3	lncRNA	ANTISENSE	ENSG00000287801	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21q21.2d	L1	L1	L1FLnI	chr21	24551095	24561456	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01684	ENSG00000237484	3153	LINC01692	ENSG00000226983	279094	None	None
L1FLnI_21q21.2e	L1	L1	L1FLnI	chr21	25232350	25241784	+	noncoding	AP001341.1	lncRNA	ANTISENSE	ENSG00000222042	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21q21.2f	L1	L1	L1FLnI	chr21	25430397	25440126	+	noncoding	LINC00158	lncRNA	ANTISENSE	ENSG00000185433	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21q21.2g	L1	L1	L1FLnI	chr21	25437116	25446694	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00158	ENSG00000185433	5415	AP000221.1	ENSG00000229962	68655	None	None
L1FLnI_21q21.3a	L1	L1	L1FLnI	chr21	25514803	25523754	+	noncoding	AP000221.1	lncRNA	ANTISENSE	ENSG00000229962	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr21:25518473-25518478,chr21:25518513-25518557
L1FLnI_21q21.3b	L1	L1	L1FLnI	chr21	25914869	25924892	+	coding	APP	protein_coding	ANTISENSE	ENSG00000142192	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21q21.3c	L1	L1	L1FLnI	chr21	26302991	26311818	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000229.1	ENSG00000273492	85610	AP001595.2	ENSG00000286902	5572	None	None
L1FLnI_21q21.3d	L1	L1	L1FLnI	chr21	26664367	26673498	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADAMTS1	ENSG00000154734	162257	CYYR1	ENSG00000166265	91081	None	None
L1FLnI_21q21.3e	L1	L1	L1FLnI	chr21	27059381	27068655	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ADAMTS5	ENSG00000154736	92293	GPX1P2	ENSG00000215326	74689	None	None
L1FLnI_21q21.3f	L1	L1	L1FLnI	chr21	27310727	27320173	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP001605.1	ENSG00000231236	38712	GPX1P2	ENSG00000215326	166778	None	None
L1FLnI_21q21.3g	L1	L1	L1FLnI	chr21	27431415	27440702	-	coding	AP001605.1	lncRNA	SENSE	ENSG00000231236	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21q21.3h	L1	L1	L1FLnI	chr21	27599924	27610342	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01673	ENSG00000234052	28271	NCSTNP1	ENSG00000219592	107663	None	None
L1FLnI_21q21.3i	L1	L1	L1FLnI	chr21	28673419	28683562	+	coding	AF165147.1	lncRNA	ANTISENSE	ENSG00000232855	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chr21:28674846-28674855
L1FLnI_21q22.11a	L1	L1	L1FLnI	chr21	31813722	31823862	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TPT1P1	ENSG00000234107	16479	AP000255.1	ENSG00000273091	77315	None	None
L1FLnI_21q22.11b	L1	L1	L1FLnI	chr21	31813734	31823862	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TPT1P1	ENSG00000234107	16479	AP000255.1	ENSG00000273091	77327	None	None
L1FLnI_21q22.11c	L1	L1	L1FLnI	chr21	33925108	33935106	-	coding	AP000311.1,LINC00649	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000249209,ENSG00000237945	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chr21:33933573-33933596	chr21:33931601-33931640,chr21:33931789-33931813
L1FLnI_21q22.11d	L1	L1	L1FLnI	chr21	33925124	33935106	-	coding	AP000311.1,LINC00649	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000249209,ENSG00000237945	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chr21:33933573-33933596	chr21:33931601-33931640,chr21:33931789-33931813
L1FLnI_21q22.12	L1	L1	L1FLnI	chr21	35493268	35503291	-	coding	RUNX1	protein_coding	SENSE	ENSG00000159216	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21q22.13a	L1	L1	L1FLnI	chr21	36613046	36623173	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AP000696.3	ENSG00000286852	31817	AP000696.1	ENSG00000231324	9508	None	None
L1FLnI_21q22.13b	L1	L1	L1FLnI	chr21	37105578	37115684	+	coding	TTC3	protein_coding	SENSE	ENSG00000182670	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr21:37107090-37107095
L1FLnI_21q22.13c	L1	L1	L1FLnI	chr21	37105578	37115674	+	coding	TTC3	protein_coding	SENSE	ENSG00000182670	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chr21:37107090-37107095
L1FLnI_21q22.2a	L1	L1	L1FLnI	chr21	40022376	40032342	-	coding	DSCAM	protein_coding	SENSE	ENSG00000171587	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21q22.2b	L1	L1	L1FLnI	chr21	40029663	40039680	+	coding	DSCAM	protein_coding	ANTISENSE	ENSG00000171587	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21q22.2c	L1	L1	L1FLnI	chr21	40105939	40116073	+	coding	DSCAM	protein_coding	ANTISENSE	ENSG00000171587	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21q22.3a	L1	L1	L1FLnI	chr21	41406954	41417233	+	noncoding	MX2	protein_coding	SENSE	ENSG00000183486	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_21q22.3b	L1	L1	L1FLnI	chr21	45266902	45276391	+	noncoding	POFUT2	protein_coding	ANTISENSE	ENSG00000186866	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chr21:45270347-45270379
L1FLnI_22p11.2a	L1	L1	L1FLnI	chr22	11284809	11294917	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC137488.1	ENSG00000276871	34850	CT867976.1	ENSG00000288262	179827	None	None
L1FLnI_22p11.2b	L1	L1	L1FLnI	chr22	11331668	11340466	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CT867976.1	ENSG00000288262	134278	AC137488.1	ENSG00000276871	81709	None	None
L1FLnI_22p11.2c	L1	L1	L1FLnI	chr22	11337934	11346564	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC137488.1	ENSG00000276871	87975	CT867976.1	ENSG00000288262	128180	None	None
L1FLnI_22p11.2d	L1	L1	L1FLnI	chr22	11427558	11436704	-	NA	None	NA	NA	None	INTERGENIC	NA	NA	CT867976.1	ENSG00000288262	38040	AC137488.1	ENSG00000276871	177599	None	None
L1FLnI_22p11.2e	L1	L1	L1FLnI	chr22	11588520	11598668	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC138776.1	ENSG00000286406	228855	CT867976.1	ENSG00000288262	108877	None	None
L1FLnI_22p11.2f	L1	L1	L1FLnI	chr22	11797457	11806616	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CT867976.1	ENSG00000288262	317814	AC138776.1	ENSG00000286406	20907	None	None
L1FLnI_22p11.2g	L1	L1	L1FLnI	chr22	11955883	11966028	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC138776.1	ENSG00000286406	45525	FRG1GP	ENSG00000283023	636438	None	None
L1FLnI_22p11.2h	L1	L1	L1FLnI	chr22	12030868	12040991	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	FRG1GP	ENSG00000283023	561475	AC138776.1	ENSG00000286406	120510	None	None
L1FLnI_22p11.2i	L1	L1	L1FLnI	chr22	12080855	12090050	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC138776.1	ENSG00000286406	170497	FRG1GP	ENSG00000283023	512416	None	None
L1FLnI_22p11.2j	L1	L1	L1FLnI	chr22	12105328	12115471	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FRG1GP	ENSG00000283023	486995	AC138776.1	ENSG00000286406	194970	None	None
L1FLnI_22p11.2k	L1	L1	L1FLnI	chr22	12105344	12115471	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FRG1GP	ENSG00000283023	486995	AC138776.1	ENSG00000286406	194986	None	None
L1FLnI_22p11.2l	L1	L1	L1FLnI	chr22	12185482	12194636	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FRG1GP	ENSG00000283023	407830	AC138776.1	ENSG00000286406	275124	None	None
L1FLnI_22p11.2m	L1	L1	L1FLnI	chr22	12385351	12395488	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC138776.1	ENSG00000286406	474993	FRG1GP	ENSG00000283023	206978	None	None
L1FLnI_22p11.2n	L1	L1	L1FLnI	chr22	12695518	12704231	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FRG1GP	ENSG00000283023	68876	FP885535.1	ENSG00000276138	2569624	None	None
L1FLnI_22p11.2o	L1	L1	L1FLnI	chr22	12797832	12807971	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FRG1GP	ENSG00000283023	171190	FP885535.1	ENSG00000276138	2465884	None	None
L1FLnI_22p11.2p	L1	L1	L1FLnI	chr22	12797832	12807955	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FRG1GP	ENSG00000283023	171190	FP885535.1	ENSG00000276138	2465900	None	None
L1FLnI_22p11.2q	L1	L1	L1FLnI	chr22	12869936	12880063	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FRG1GP	ENSG00000283023	243294	FP885535.1	ENSG00000276138	2393792	None	None
L1FLnI_22q11.1a	L1	L1	L1FLnI	chr22	15214123	15224167	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	FP885535.1	ENSG00000276138	49688	FRG1GP	ENSG00000283023	2587481	None	None
L1FLnI_22q11.1b	L1	L1	L1FLnI	chr22	15490840	15500194	+	coding	YME1L1P1	unprocessed_pseudogene	SENSE	ENSG00000236831	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q11.1c	L1	L1	L1FLnI	chr22	15845024	15853982	-	noncoding	NBEAP3	unprocessed_pseudogene	ANTISENSE	ENSG00000223875	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q11.1d	L1	L1	L1FLnI	chr22	15979591	15989614	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092854.1	ENSG00000278188	152153	AC145543.1	ENSG00000233866	63791	None	None
L1FLnI_22q11.1e	L1	L1	L1FLnI	chr22	16017519	16027544	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC145543.1	ENSG00000233866	101719	AC092854.1	ENSG00000278188	114223	None	None
L1FLnI_22q11.1f	L1	L1	L1FLnI	chr22	16180220	16190238	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092854.1	ENSG00000278188	38348	ABCD1P4	ENSG00000225293	197456	None	None
L1FLnI_22q11.1g	L1	L1	L1FLnI	chr22	16231555	16241700	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092854.1	ENSG00000278188	89683	ABCD1P4	ENSG00000225293	145994	None	None
L1FLnI_22q11.1h	L1	L1	L1FLnI	chr22	16231555	16241690	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC092854.1	ENSG00000278188	89683	ABCD1P4	ENSG00000225293	146004	None	None
L1FLnI_22q11.1i	L1	L1	L1FLnI	chr22	16443726	16453860	+	noncoding	SLC9B1P4	unprocessed_pseudogene	ANTISENSE	ENSG00000227367	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q11.1j	L1	L1	L1FLnI	chr22	16656888	16666998	+	coding	TPTEP1,PARP4P3,ANKRD62P1-PARP4P3	transcribed_unprocessed_pseudogene,transcribed_unprocessed_pseudogene,lncRNA	SENSE,ANTISENSE,ANTISENSE	ENSG00000100181,ENSG00000249263,ENSG00000189295	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q11.1k	L1	L1	L1FLnI	chr22	16763807	16772631	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01665	ENSG00000235343	15162	XKR3	ENSG00000172967	10781	None	None
L1FLnI_22q11.1l	L1	L1	L1FLnI	chr22	16971212	16981669	+	coding	GAB4	protein_coding	ANTISENSE	ENSG00000215568	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q11.1m	L1	L1	L1FLnI	chr22	16996164	17005247	-	coding	GAB4	protein_coding	SENSE	ENSG00000215568	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q11.1n	L1	L1	L1FLnI	chr22	17020634	17030785	+	coding	VN1R9P	processed_pseudogene	ANTISENSE	ENSG00000276400	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q11.1o	L1	L1	L1FLnI	chr22	17020634	17030769	+	coding	VN1R9P	processed_pseudogene	ANTISENSE	ENSG00000276400	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q11.22a	L1	L1	L1FLnI	chr22	22184356	22194471	+	coding	IGLV10-54,BMP6P1	IG_V_gene,processed_pseudogene	SENSE,SENSE	ENSG00000211642,ENSG00000236323	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q11.22b	L1	L1	L1FLnI	chr22	22276302	22286312	-	coding	AC245060.5	lncRNA	SENSE	ENSG00000274422	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q11.22c	L1	L1	L1FLnI	chr22	22328191	22337435	+	noncoding	AC245060.7	lncRNA	SENSE	ENSG00000286129	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q11.22d	L1	L1	L1FLnI	chr22	22328191	22337459	+	noncoding	AC245060.7	lncRNA	SENSE	ENSG00000286129	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q11.22e	L1	L1	L1FLnI	chr22	22962654	22971293	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC245054.2	ENSG00000237472	16970	IGLC7	ENSG00000211685	39620	None	None
L1FLnI_22q11.22f	L1	L1	L1FLnI	chr22	23043477	23053252	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC245054.1	ENSG00000223679	35121	RSPH14	ENSG00000100218	6163	None	None
L1FLnI_22q11.23a	L1	L1	L1FLnI	chr22	23659485	23669638	+	coding	GUSBP11,AP000347.1	lncRNA,transcribed_unprocessed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000228315,ENSG00000272578	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q11.23b	L1	L1	L1FLnI	chr22	25339604	25348489	-	noncoding	AL022324.1	unprocessed_pseudogene	ANTISENSE	ENSG00000230637	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q12.1a	L1	L1	L1FLnI	chr22	27361073	27369725	-	noncoding	AL020994.2	lncRNA	ANTISENSE	ENSG00000230051	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q12.1b	L1	L1	L1FLnI	chr22	28080033	28090177	+	coding	TTC28	protein_coding	ANTISENSE	ENSG00000100154	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q12.1c	L1	L1	L1FLnI	chr22	28160185	28170330	+	coding	TTC28	protein_coding	ANTISENSE	ENSG00000100154	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q12.1d	L1	L1	L1FLnI	chr22	28187825	28197939	+	coding	TTC28	protein_coding	ANTISENSE	ENSG00000100154	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q12.1e	L1	L1	L1FLnI	chr22	28205688	28215791	+	coding	TTC28	protein_coding	ANTISENSE	ENSG00000100154	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q12.1f	L1	L1	L1FLnI	chr22	28333352	28343533	-	coding	TTC28	protein_coding	SENSE	ENSG00000100154	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q12.1g	L1	L1	L1FLnI	chr22	28386349	28396369	-	coding	TTC28	protein_coding	SENSE	ENSG00000100154	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chr22:28396134-28396442	None
L1FLnI_22q12.1h	L1	L1	L1FLnI	chr22	28525449	28535575	+	coding	TTC28	protein_coding	ANTISENSE	ENSG00000100154	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_22q12.1	L1	L1	L1FLI	chr22	28662283	28670329	+	coding	TTC28	protein_coding	ANTISENSE	ENSG00000100154	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q12.3a	L1	L1	L1FLnI	chr22	32294167	32304184	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL021937.3	ENSG00000234626	22880	AL008723.2	ENSG00000273325	9036	None	None
L1FLnI_22q12.3b	L1	L1	L1FLnI	chr22	33169194	33177813	+	noncoding	LARGE1	protein_coding	ANTISENSE	ENSG00000133424	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q12.3c	L1	L1	L1FLnI	chr22	33637006	33647109	+	noncoding	LARGE1	protein_coding	ANTISENSE	ENSG00000133424	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q12.3d	L1	L1	L1FLnI	chr22	34250737	34259389	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL021877.1	ENSG00000235485	329696	LINC01643	ENSG00000236052	31941	None	chr22:34256574-34256577,chr22:34257646-34257651
L1FLnI_22q12.3e	L1	L1	L1FLnI	chr22	34549185	34559208	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL021877.1	ENSG00000235485	29877	LINC01643	ENSG00000236052	330389	None	None
L1FLnI_22q12.3f	L1	L1	L1FLnI	chr22	34676870	34686900	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	Z82196.1	ENSG00000234891	16226	AL021877.2	ENSG00000280356	25008	None	None
L1FLnI_22q12.3g	L1	L1	L1FLnI	chr22	34745142	34753709	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL024495.1	ENSG00000286592	2967	Z82196.2	ENSG00000237316	20223	None	None
L1FLnI_22q12.3h	L1	L1	L1FLnI	chr22	34785211	34795338	+	noncoding	AL024495.1	lncRNA	ANTISENSE	ENSG00000286592	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q12.3i	L1	L1	L1FLnI	chr22	34813301	34823423	+	coding	AL024495.1	lncRNA	ANTISENSE	ENSG00000286592	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q12.3j	L1	L1	L1FLnI	chr22	35024484	35034913	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ISX	ENSG00000175329	31223	AL024495.1	ENSG00000286592	21622	None	None
L1FLnI_22q13.31a	L1	L1	L1FLnI	chr22	46816765	46826315	-	coding	TBC1D22A	protein_coding	ANTISENSE	ENSG00000054611	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_22q13.31b	L1	L1	L1FLnI	chr22	47345287	47355153	-	coding	Z82186.1	lncRNA	ANTISENSE	ENSG00000224715	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_22q13.32	L1	L1	L1FLI	chr22	48984749	48992794	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL078622.1	ENSG00000286381	54690	LINC01310	ENSG00000205632	86363	None	None
L1FLnI_22q13.33	L1	L1	L1FLnI	chr22	49315838	49324351	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC207130.1	ENSG00000285722	48573	Z82202.1	ENSG00000280199	49758	None	None
L1FLnI_Xp22.33a	L1	L1	L1FLnI	chrX	1703273	1713286	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL683807.1	ENSG00000223511	19298	ASMT	ENSG00000196433	60192	None	None
L1FLnI_Xp22.33b	L1	L1	L1FLnI	chrX	3055822	3065946	+	coding	ARSF,RN7SL578P	protein_coding,misc_RNA	SENSE,ANTISENSE	ENSG00000062096,ENSG00000239228	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.33c	L1	L1	L1FLnI	chrX	3055822	3065966	+	coding	ARSF,RN7SL578P	protein_coding,misc_RNA	SENSE,ANTISENSE	ENSG00000062096,ENSG00000239228	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.32	L1	L1	L1FLnI	chrX	5476958	5486966	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC095353.1	ENSG00000201660	66707	AC110995.1	ENSG00000236120	166452	None	None
L1FLnI_Xp22.31a	L1	L1	L1FLnI	chrX	6583516	6592385	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PUDP	ENSG00000130021	75480	VCX3A	ENSG00000169059	48398	None	None
L1FLnI_Xp22.31b	L1	L1	L1FLnI	chrX	6928983	6939141	+	coding	PUDP	protein_coding	ANTISENSE	ENSG00000130021	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chrX:6938675-6938806	chrX:6932494-6932523
L1FLnI_Xp22.31c	L1	L1	L1FLnI	chrX	6971225	6980164	-	coding	PUDP	protein_coding	SENSE	ENSG00000130021	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.31d	L1	L1	L1FLnI	chrX	7520834	7529419	+	coding	STS	protein_coding	SENSE	ENSG00000101846	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.31e	L1	L1	L1FLnI	chrX	7587094	7597252	-	coding	STS	protein_coding	ANTISENSE	ENSG00000101846	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.31f	L1	L1	L1FLnI	chrX	8769336	8779526	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ANOS1	ENSG00000011201	37199	DRAXINP1	ENSG00000225574	3988	None	None
L1FLnI_Xp22.2a	L1	L1	L1FLnI	chrX	10634586	10644667	+	noncoding	MID1	protein_coding	ANTISENSE	ENSG00000101871	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.2b	L1	L1	L1FLnI	chrX	10711561	10721711	+	coding	MID1	protein_coding	ANTISENSE	ENSG00000101871	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.2c	L1	L1	L1FLnI	chrX	10949077	10959599	+	noncoding	AC073529.1	lncRNA	ANTISENSE	ENSG00000234129	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_Xp22.2a	L1	L1	L1FLI	chrX	11706248	11714295	+	coding	AC004554.2	lncRNA	ANTISENSE	ENSG00000282840	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chrX:11713305-11713706	None
L1FLI_Xp22.2b	L1	L1	L1FLI	chrX	11934271	11942317	-	coding	FRMPD4	protein_coding	ANTISENSE	ENSG00000169933	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.2d	L1	L1	L1FLnI	chrX	12102928	12113071	+	noncoding	FRMPD4	protein_coding	SENSE	ENSG00000169933	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.2e	L1	L1	L1FLnI	chrX	12469036	12477969	+	coding	FRMPD4	protein_coding	SENSE	ENSG00000169933	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.2f	L1	L1	L1FLnI	chrX	12511747	12521859	-	noncoding	FRMPD4	protein_coding	ANTISENSE	ENSG00000169933	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.2g	L1	L1	L1FLnI	chrX	12848301	12858703	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TLR7	ENSG00000196664	8369	MRPL35P4	ENSG00000230691	2871	None	None
L1FLnI_Xp22.2h	L1	L1	L1FLnI	chrX	12857808	12867941	-	coding	TLR7	protein_coding	ANTISENSE	ENSG00000196664	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chrX:12866866-12866890,chrX:12866993-12867000,chrX:12867004-12867013,chrX:12867032-12867051,chrX:12867064-12867081
L1FLnI_Xp22.2i	L1	L1	L1FLnI	chrX	13131819	13141966	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC02154	ENSG00000235385	124082	AC079171.1	ENSG00000261030	37246	None	None
L1FLnI_Xp22.2j	L1	L1	L1FLnI	chrX	13721128	13730126	+	noncoding	TRAPPC2	protein_coding	ANTISENSE	ENSG00000196459	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrX:13722206-13722211
L1FLnI_Xp22.2k	L1	L1	L1FLnI	chrX	14103447	14113475	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC002524.1	ENSG00000233247	130907	GEMIN8	ENSG00000046647	73554	None	None
L1FLnI_Xp22.2l	L1	L1	L1FLnI	chrX	14200203	14209053	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC002524.1	ENSG00000233247	35329	GEMIN8	ENSG00000046647	170310	None	None
L1FLnI_Xp22.2m	L1	L1	L1FLnI	chrX	14366197	14375731	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC002524.1	ENSG00000233247	121269	GLRA2	ENSG00000101958	153567	None	None
L1FLnI_Xp22.2n	L1	L1	L1FLnI	chrX	14388406	14397341	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC002524.1	ENSG00000233247	143478	GLRA2	ENSG00000101958	131957	None	None
L1FLnI_Xp22.2o	L1	L1	L1FLnI	chrX	14457380	14467503	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GLRA2	ENSG00000101958	61795	AC002524.1	ENSG00000233247	212452	None	None
L1FLnI_Xp22.2p	L1	L1	L1FLnI	chrX	14683412	14692439	-	coding	GLRA2	protein_coding	ANTISENSE	ENSG00000101958	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.2q	L1	L1	L1FLnI	chrX	14766170	14776649	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NPM1P9	ENSG00000231066	57827	GLRA2	ENSG00000101958	34358	None	None
L1FLnI_Xp22.2r	L1	L1	L1FLnI	chrX	14805689	14815829	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GLRA2	ENSG00000101958	73877	NPM1P9	ENSG00000231066	18647	None	None
L1FLnI_Xp22.2s	L1	L1	L1FLnI	chrX	14968503	14978622	-	coding	TPT1P14	processed_pseudogene	SENSE	ENSG00000235929	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.2t	L1	L1	L1FLnI	chrX	15084923	15095058	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TPT1P14	ENSG00000235929	106460	AC112498.1	ENSG00000236929	22379	None	None
L1FLnI_Xp22.2u	L1	L1	L1FLnI	chrX	16230151	16240356	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073909.1	ENSG00000235071	233986	RPL6P30	ENSG00000215313	30862	None	None
L1FLnI_Xp22.2v	L1	L1	L1FLnI	chrX	16230180	16240356	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073909.1	ENSG00000235071	233986	RPL6P30	ENSG00000215313	30891	None	None
L1FLnI_Xp22.2w	L1	L1	L1FLnI	chrX	16318147	16328301	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL6P30	ENSG00000215313	118858	AC073909.1	ENSG00000235071	146041	None	None
L1FLnI_Xp22.2x	L1	L1	L1FLnI	chrX	16356578	16366718	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL6P30	ENSG00000215313	157289	AC073909.1	ENSG00000235071	107624	None	None
L1FLnI_Xp22.2y	L1	L1	L1FLnI	chrX	16493858	16504011	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073909.1	ENSG00000235071	18518	RN7SL658P	ENSG00000239333	35126	None	None
L1FLnI_Xp22.2z	L1	L1	L1FLnI	chrX	17229524	17238149	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CBX1P4	ENSG00000214321	44488	REPS2	ENSG00000169891	76252	None	None
L1FLnI_Xp22.2aa	L1	L1	L1FLnI	chrX	17341985	17352012	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL845433.1	ENSG00000238764	5918	CBX1P4	ENSG00000214321	58892	None	None
L1FLnI_Xp22.13a	L1	L1	L1FLnI	chrX	17568170	17578334	-	coding	NHS,Z93022.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000188158,ENSG00000235834	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.13b	L1	L1	L1FLnI	chrX	17568187	17578334	-	coding	NHS,Z93022.1	protein_coding,lncRNA	ANTISENSE,ANTISENSE	ENSG00000188158,ENSG00000235834	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.13c	L1	L1	L1FLnI	chrX	17780878	17790889	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RAI2	ENSG00000131831	9160	Z93242.2	ENSG00000227873	11480	None	None
L1ORF2_Xp22.13	L1	L1	L1ORF2	chrX	18103893	18111931	+	coding	LINC01456	lncRNA	ANTISENSE	ENSG00000225882	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.13d	L1	L1	L1FLnI	chrX	18733633	18743762	-	coding	PPEF1	protein_coding	ANTISENSE	ENSG00000086717	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.13e	L1	L1	L1FLnI	chrX	19139170	19149200	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ADGRG2	ENSG00000173698	16533	PDHA1	ENSG00000131828	194693	None	None
L1FLnI_Xp22.12a	L1	L1	L1FLnI	chrX	19272871	19283007	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PDHA1	ENSG00000131828	60886	ADGRG2	ENSG00000173698	150234	None	None
L1FLnI_Xp22.12b	L1	L1	L1FLnI	chrX	19413567	19423689	+	coding	MAP3K15	protein_coding	ANTISENSE	ENSG00000180815	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.12c	L1	L1	L1FLnI	chrX	19939755	19949796	-	coding	BCLAF3	protein_coding	SENSE	ENSG00000173681	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.12d	L1	L1	L1FLnI	chrX	19939778	19949796	-	coding	BCLAF3	protein_coding	SENSE	ENSG00000173681	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.12e	L1	L1	L1FLnI	chrX	20689740	20699871	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL807740.1	ENSG00000283400	197391	AL807742.1	ENSG00000283380	69847	None	None
L1FLnI_Xp22.12f	L1	L1	L1FLnI	chrX	20749242	20757955	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL807742.1	ENSG00000283380	11763	AL807740.1	ENSG00000283400	256893	None	None
L1FLnI_Xp22.12g	L1	L1	L1FLnI	chrX	20767876	20777825	+	coding	AL807742.1	lncRNA	ANTISENSE	ENSG00000283380	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.12h	L1	L1	L1FLnI	chrX	20841945	20852124	+	coding	AL807742.1	lncRNA	ANTISENSE	ENSG00000283380	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.12i	L1	L1	L1FLnI	chrX	20870773	20881229	+	noncoding	AL807742.1	lncRNA	ANTISENSE	ENSG00000283380	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.12j	L1	L1	L1FLnI	chrX	20899270	20909871	-	coding	AL807742.1	lncRNA	SENSE	ENSG00000283380	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.12k	L1	L1	L1FLnI	chrX	20977642	20987588	+	noncoding	AL807742.1	lncRNA	ANTISENSE	ENSG00000283380	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chrX:20980149-20980268	None
L1FLnI_Xp22.12l	L1	L1	L1FLnI	chrX	21022991	21031617	-	noncoding	AL807742.1	lncRNA	SENSE	ENSG00000283380	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.12m	L1	L1	L1FLnI	chrX	21286609	21296338	-	noncoding	AL807742.1	lncRNA	SENSE	ENSG00000283380	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chrX:21290005-21290054	None
L1FLnI_Xp22.12n	L1	L1	L1FLnI	chrX	21335965	21346218	+	coding	AL807742.1	lncRNA	ANTISENSE	ENSG00000283380	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.12o	L1	L1	L1FLnI	chrX	21345498	21354837	+	noncoding	AL807742.1	lncRNA	ANTISENSE	ENSG00000283380	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.12p	L1	L1	L1FLnI	chrX	21415288	21424987	-	coding	CNKSR2,RARRES2P3	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000149970,ENSG00000231913	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.12q	L1	L1	L1FLnI	chrX	21533301	21542023	-	noncoding	CNKSR2	protein_coding	ANTISENSE	ENSG00000149970	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.12r	L1	L1	L1FLnI	chrX	21541089	21551254	+	noncoding	CNKSR2	protein_coding	SENSE	ENSG00000149970	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.11a	L1	L1	L1FLnI	chrX	21998945	22009091	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PHEX	ENSG00000102174	23234	SMS	ENSG00000102172	4108	None	None
L1FLnI_Xp22.11b	L1	L1	L1FLnI	chrX	22228242	22238800	-	noncoding	PHEX,PTCHD1-AS	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000102174,ENSG00000233067	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.11c	L1	L1	L1FLnI	chrX	22234644	22244939	+	noncoding	PHEX,PTCHD1-AS	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000102174,ENSG00000233067	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.11d	L1	L1	L1FLnI	chrX	22605690	22615819	+	coding	AC004470.2	lncRNA	ANTISENSE	ENSG00000288546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.11e	L1	L1	L1FLnI	chrX	22673360	22683104	+	coding	AC004470.2	lncRNA	ANTISENSE	ENSG00000288546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.11f	L1	L1	L1FLnI	chrX	22862883	22873350	+	coding	AC004470.2	lncRNA	ANTISENSE	ENSG00000288546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_Xp22.11	L1	L1	L1FLI	chrX	23237516	23245560	+	coding	AC004470.2	lncRNA	ANTISENSE	ENSG00000288546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.11g	L1	L1	L1FLnI	chrX	23357163	23367291	-	noncoding	PTCHD1	protein_coding	ANTISENSE	ENSG00000165186	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp22.11h	L1	L1	L1FLnI	chrX	23422813	23432945	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PRDX4	ENSG00000123131	231317	PTCHD1	ENSG00000165186	18439	None	None
L1FLnI_Xp22.11i	L1	L1	L1FLnI	chrX	23471723	23480868	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRDX4	ENSG00000123131	183394	PTCHD1	ENSG00000165186	67349	None	None
L1FLnI_Xp22.11j	L1	L1	L1FLnI	chrX	23520630	23532223	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PTCHD1	ENSG00000165186	116256	PRDX4	ENSG00000123131	132039	None	None
L1FLnI_Xp22.11k	L1	L1	L1FLnI	chrX	23560163	23570293	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PRDX4	ENSG00000123131	93969	PTCHD1	ENSG00000165186	155789	None	None
L1FLnI_Xp22.11l	L1	L1	L1FLnI	chrX	23645410	23655333	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PRDX4	ENSG00000123131	8929	PTCHD1	ENSG00000165186	241036	None	None
L1FLnI_Xp21.3a	L1	L1	L1FLnI	chrX	25116642	25126661	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC112778.1	ENSG00000176812	67720	RN7SL91P	ENSG00000240439	55703	None	None
L1FLnI_Xp21.3b	L1	L1	L1FLnI	chrX	25325170	25334688	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC112778.1	ENSG00000176812	129963	RPP40P1	ENSG00000229310	256665	None	None
L1FLnI_Xp21.3c	L1	L1	L1FLnI	chrX	25361309	25371024	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPP40P1	ENSG00000229310	220329	AC112778.1	ENSG00000176812	166102	None	None
L1FLnI_Xp21.3d	L1	L1	L1FLnI	chrX	25408267	25417689	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPP40P1	ENSG00000229310	173664	AC112778.1	ENSG00000176812	213060	None	None
L1FLnI_Xp21.3e	L1	L1	L1FLnI	chrX	25419863	25430449	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPP40P1	ENSG00000229310	160904	AC112778.1	ENSG00000176812	224656	None	None
L1FLnI_Xp21.3f	L1	L1	L1FLnI	chrX	25585702	25594749	-	noncoding	RPP40P1	processed_pseudogene	SENSE	ENSG00000229310	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chrX:25589868-25590107	None
L1FLnI_Xp21.3g	L1	L1	L1FLnI	chrX	25629324	25637866	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPP40P1	ENSG00000229310	37516	AC097263.1	ENSG00000228519	7856	None	None
L1FLnI_Xp21.3h	L1	L1	L1FLnI	chrX	25931648	25940318	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC121342.1	ENSG00000233403	38104	MAGEB18	ENSG00000176774	198025	None	None
L1FLnI_Xp21.3i	L1	L1	L1FLnI	chrX	25972974	25983378	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC121342.1	ENSG00000233403	79430	MAGEB18	ENSG00000176774	154965	None	None
L1FLnI_Xp21.3j	L1	L1	L1FLnI	chrX	26176041	26185726	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MAGEB6	ENSG00000176746	6714	AC005297.1	ENSG00000227511	5128	None	None
L1FLnI_Xp21.3k	L1	L1	L1FLnI	chrX	26280810	26290917	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073614.1	ENSG00000228464	54319	AC005297.3	ENSG00000237171	56152	None	None
L1FLnI_Xp21.3l	L1	L1	L1FLnI	chrX	26313919	26323946	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC073614.1	ENSG00000228464	21290	AC005297.3	ENSG00000237171	89261	None	None
L1FLnI_Xp21.3m	L1	L1	L1FLnI	chrX	26330510	26340604	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005297.3	ENSG00000237171	105852	AC073614.1	ENSG00000228464	4632	None	None
L1FLnI_Xp21.3n	L1	L1	L1FLnI	chrX	26809233	26818188	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC112493.1	ENSG00000242021	224719	RNU1-142P	ENSG00000252491	18947	None	None
L1FLnI_Xp21.3o	L1	L1	L1FLnI	chrX	27295724	27306183	+	coding	AC107419.1	lncRNA	ANTISENSE	ENSG00000228933	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp21.3p	L1	L1	L1FLnI	chrX	27755087	27765246	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	DCAF8L2	ENSG00000189186	6266	MAGEB10	ENSG00000177689	42744	None	None
L1FLnI_Xp21.3q	L1	L1	L1FLnI	chrX	27755087	27765233	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	DCAF8L2	ENSG00000189186	6266	MAGEB10	ENSG00000177689	42757	None	None
L1ORF2_Xp21.3	L1	L1	L1ORF2	chrX	28205766	28213805	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	DCAF8L1	ENSG00000226372	224317	MIR6134	ENSG00000277569	281750	None	None
L1FLnI_Xp21.3r	L1	L1	L1FLnI	chrX	28361592	28371721	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR6134	ENSG00000277569	123834	DCAF8L1	ENSG00000226372	380143	None	None
L1FLnI_Xp21.2a	L1	L1	L1FLnI	chrX	29643868	29652411	+	noncoding	IL1RAPL1	protein_coding	SENSE	ENSG00000169306	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp21.2b	L1	L1	L1FLnI	chrX	29981232	29991385	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PIGFP3	ENSG00000227592	25775	IL1RAPL1	ENSG00000169306	24514	None	None
L1FLnI_Xp21.2c	L1	L1	L1FLnI	chrX	30053400	30062060	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005185.1	ENSG00000270794	147363	PIGFP3	ENSG00000227592	35519	None	None
L1FLnI_Xp21.2d	L1	L1	L1FLnI	chrX	30767271	30776132	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC108359.1	ENSG00000277876	45683	GK	ENSG00000198814	35815	None	None
L1FLnI_Xp21.2e	L1	L1	L1FLnI	chrX	31076818	31086963	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DMD	ENSG00000198947	10714	FTHL17	ENSG00000132446	4777	None	None
L1FLnI_Xp21.2f	L1	L1	L1FLnI	chrX	31464707	31475110	-	noncoding	DMD	protein_coding	SENSE	ENSG00000198947	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp21.1a	L1	L1	L1FLnI	chrX	32727400	32737429	+	coding	DMD	protein_coding	ANTISENSE	ENSG00000198947	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp21.1b	L1	L1	L1FLnI	chrX	33412323	33422513	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL050305.1	ENSG00000215310	150	AL591378.1	ENSG00000287700	296445	None	None
L1FLnI_Xp21.1c	L1	L1	L1FLnI	chrX	33472560	33483115	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL050305.1	ENSG00000215310	60387	AL591378.1	ENSG00000287700	235843	None	None
L1FLnI_Xp21.1d	L1	L1	L1FLnI	chrX	33545791	33556210	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL591378.1	ENSG00000287700	162748	AL050305.1	ENSG00000215310	133618	None	None
L1FLnI_Xp21.1e	L1	L1	L1FLnI	chrX	33823248	33833794	-	coding	AL591501.1	lncRNA	ANTISENSE	ENSG00000233928	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_Xp21.1a	L1	L1	L1FLI	chrX	34247264	34254915	-	coding	AL591501.1,AL592043.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000233928,ENSG00000233571	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp21.1f	L1	L1	L1FLnI	chrX	34411692	34421672	+	coding	AL592043.1	lncRNA	ANTISENSE	ENSG00000233571	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp21.1g	L1	L1	L1FLnI	chrX	34411692	34421662	+	coding	AL592043.1	lncRNA	ANTISENSE	ENSG00000233571	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp21.1h	L1	L1	L1FLnI	chrX	34475072	34485580	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL592504.1	ENSG00000271136	31340	AL592043.1	ENSG00000233571	59535	None	None
L1FLnI_Xp21.1i	L1	L1	L1FLnI	chrX	34973926	34984063	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FAM47B	ENSG00000189132	29011	AL596268.1	ENSG00000229347	74864	None	None
L1FLnI_Xp21.1j	L1	L1	L1FLnI	chrX	35032868	35042599	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAM47B	ENSG00000189132	87953	AL596268.1	ENSG00000229347	16328	None	None
L1FLnI_Xp21.1k	L1	L1	L1FLnI	chrX	35132021	35141059	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1087P	ENSG00000252411	453114	AL596268.1	ENSG00000229347	72047	None	None
L1FLnI_Xp21.1l	L1	L1	L1FLnI	chrX	35629907	35640325	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL161722.1	ENSG00000233663	70586	SIAH1P1	ENSG00000230227	2843	None	None
L1FLnI_Xp21.1m	L1	L1	L1FLnI	chrX	36093210	36101897	-	noncoding	CFAP47	protein_coding	ANTISENSE	ENSG00000165164	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp21.1n	L1	L1	L1FLnI	chrX	36119809	36128354	-	noncoding	CFAP47	protein_coding	ANTISENSE	ENSG00000165164	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp21.1o	L1	L1	L1FLnI	chrX	36169799	36179824	-	coding	CFAP47	protein_coding	ANTISENSE	ENSG00000165164	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp21.1p	L1	L1	L1FLnI	chrX	36229114	36239265	-	coding	CFAP47	protein_coding	ANTISENSE	ENSG00000165164	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp21.1q	L1	L1	L1FLnI	chrX	36237392	36246868	+	noncoding	CFAP47	protein_coding	SENSE	ENSG00000165164	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_Xp21.1b	L1	L1	L1FLI	chrX	36464178	36472219	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL592156.1	ENSG00000286475	206459	AL606516.1	ENSG00000226484	23886	None	None
L1FLnI_Xp21.1r	L1	L1	L1FLnI	chrX	36699700	36709834	-	coding	AL592156.1	lncRNA	SENSE	ENSG00000286475	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp21.1s	L1	L1	L1FLnI	chrX	36883620	36894838	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL592156.1	ENSG00000286475	16931	BX842568.4	ENSG00000235510	63075	None	None
L1FLnI_Xp21.1t	L1	L1	L1FLnI	chrX	36918531	36927436	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX842568.4	ENSG00000235510	30477	AL592156.1	ENSG00000286475	51842	None	None
L1FLnI_Xp21.1u	L1	L1	L1FLnI	chrX	37315925	37327519	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MOB1AP2	ENSG00000233810	23698	PRRG1	ENSG00000130962	21756	None	None
L1FLnI_Xp21.1v	L1	L1	L1FLnI	chrX	37394542	37404139	+	coding	PRRG1,AF241726.2	protein_coding,protein_coding	SENSE,SENSE	ENSG00000130962,ENSG00000250349	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp21.1w	L1	L1	L1FLnI	chrX	37524907	37534415	-	noncoding	AF241726.2	protein_coding	ANTISENSE	ENSG00000250349	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp21.1x	L1	L1	L1FLnI	chrX	37581289	37591434	-	coding	AF241726.2,LANCL3	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000250349,ENSG00000147036	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp21.1y	L1	L1	L1FLnI	chrX	37627948	37638092	-	coding	AF241726.2,LANCL3	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000250349,ENSG00000147036	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp21.1z	L1	L1	L1FLnI	chrX	37765113	37775261	+	coding	AF241726.2	protein_coding	SENSE	ENSG00000250349	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.4a	L1	L1	L1FLnI	chrX	39179871	39189999	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC108879.1	ENSG00000224610	36104	RNU6-591P	ENSG00000207122	98586	None	None
L1FLnI_Xp11.4b	L1	L1	L1FLnI	chrX	39340717	39351301	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01281	ENSG00000235304	13355	LINC01282	ENSG00000236747	15984	None	None
L1FLnI_Xp11.4c	L1	L1	L1FLnI	chrX	41805087	41815252	+	coding	CASK	protein_coding	ANTISENSE	ENSG00000147044	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.4d	L1	L1	L1FLnI	chrX	42000801	42010829	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CASK	ENSG00000147044	77156	AL133329.1	ENSG00000233103	37054	None	None
L1FLnI_Xp11.4e	L1	L1	L1FLnI	chrX	42000801	42010844	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CASK	ENSG00000147044	77156	AL133329.1	ENSG00000233103	37039	None	None
L1FLnI_Xp11.4f	L1	L1	L1FLnI	chrX	42156257	42164842	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1124P	ENSG00000206896	9437	Z92545.1	ENSG00000228780	5513	None	None
L1FLnI_Xp11.4g	L1	L1	L1FLnI	chrX	42201665	42211683	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	Z93403.1	ENSG00000231772	40776	RNU6-1124P	ENSG00000206896	27280	None	None
L1FLnI_Xp11.4h	L1	L1	L1FLnI	chrX	42335959	42347334	-	noncoding	Z93403.1	lncRNA	ANTISENSE	ENSG00000231772	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.4i	L1	L1	L1FLnI	chrX	42344181	42352916	-	noncoding	Z93403.1	lncRNA	ANTISENSE	ENSG00000231772	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.4j	L1	L1	L1FLnI	chrX	42407191	42415913	-	noncoding	Z93403.1	lncRNA	ANTISENSE	ENSG00000231772	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.4k	L1	L1	L1FLnI	chrX	42424362	42434390	-	coding	Z93403.1	lncRNA	ANTISENSE	ENSG00000231772	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.4l	L1	L1	L1FLnI	chrX	42432148	42441374	+	noncoding	Z93403.1	lncRNA	SENSE	ENSG00000231772	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.3a	L1	L1	L1FLnI	chrX	42503226	42513668	+	noncoding	Z93403.1	lncRNA	SENSE	ENSG00000231772	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.3b	L1	L1	L1FLnI	chrX	42586185	42596309	+	coding	Z93403.1	lncRNA	SENSE	ENSG00000231772	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.3c	L1	L1	L1FLnI	chrX	42647243	42657356	+	coding	Z93403.1	lncRNA	SENSE	ENSG00000231772	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.3d	L1	L1	L1FLnI	chrX	42810245	42820449	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL451086.1	ENSG00000270280	179725	PPP1R2C	ENSG00000102055	32082	None	None
L1FLnI_Xp11.3e	L1	L1	L1FLnI	chrX	42884872	42894871	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PPP1R2C	ENSG00000102055	106709	AL451086.1	ENSG00000270280	105303	None	None
L1FLnI_Xp11.3f	L1	L1	L1FLnI	chrX	42916972	42928681	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPP1R2C	ENSG00000102055	138809	AL451086.1	ENSG00000270280	71493	None	None
L1FLnI_Xp11.3g	L1	L1	L1FLnI	chrX	42919866	42928681	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPP1R2C	ENSG00000102055	141703	AL451086.1	ENSG00000270280	71493	None	None
L1FLnI_Xp11.3h	L1	L1	L1FLnI	chrX	43044578	43055261	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PINCR	ENSG00000224294	121733	AL451086.1	ENSG00000270280	44182	None	None
L1FLnI_Xp11.3i	L1	L1	L1FLnI	chrX	43197904	43207818	-	coding	PINCR	lncRNA	ANTISENSE	ENSG00000224294	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.3j	L1	L1	L1FLnI	chrX	43197904	43206512	-	coding	PINCR	lncRNA	ANTISENSE	ENSG00000224294	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.3k	L1	L1	L1FLnI	chrX	43207242	43217752	+	noncoding	PINCR	lncRNA	SENSE	ENSG00000224294	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.3l	L1	L1	L1FLnI	chrX	43208190	43217752	+	noncoding	PINCR	lncRNA	SENSE	ENSG00000224294	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.3m	L1	L1	L1FLnI	chrX	43305699	43315290	-	coding	AL023574.1	lncRNA	ANTISENSE	ENSG00000285899	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.3n	L1	L1	L1FLnI	chrX	43319962	43330123	-	noncoding	AL023574.1	lncRNA	ANTISENSE	ENSG00000285899	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.3o	L1	L1	L1FLnI	chrX	43344704	43353713	-	noncoding	AL023574.1	lncRNA	ANTISENSE	ENSG00000285899	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.3p	L1	L1	L1FLnI	chrX	43669951	43680096	-	coding	MAOA	protein_coding	ANTISENSE	ENSG00000189221	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.3q	L1	L1	L1FLnI	chrX	43721191	43731448	-	coding	MAOA	protein_coding	ANTISENSE	ENSG00000189221	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrX:43728151-43728156,chrX:43728163-43728166
L1FLnI_Xp11.3r	L1	L1	L1FLnI	chrX	43921432	43931018	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NDP	ENSG00000124479	17758	MAOB	ENSG00000069535	38982	None	None
L1FLnI_Xp11.3s	L1	L1	L1FLnI	chrX	44249332	44259109	+	noncoding	EFHC2	protein_coding	ANTISENSE	ENSG00000183690	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.3t	L1	L1	L1FLnI	chrX	44982909	44993048	-	coding	KDM6A	protein_coding	ANTISENSE	ENSG00000147050	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.3u	L1	L1	L1FLnI	chrX	44982916	44993048	-	coding	KDM6A	protein_coding	ANTISENSE	ENSG00000147050	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.3v	L1	L1	L1FLnI	chrX	45242977	45252360	-	noncoding	AC136489.1	lncRNA	ANTISENSE	ENSG00000229491	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.3w	L1	L1	L1FLnI	chrX	45353628	45365074	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL020989.1	ENSG00000237782	16453	AC136489.1	ENSG00000229491	19711	None	None
L1FLnI_Xp11.3x	L1	L1	L1FLnI	chrX	45367152	45378838	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC136489.1	ENSG00000229491	33235	AL020989.1	ENSG00000237782	2689	None	None
L1FLnI_Xp11.3y	L1	L1	L1FLnI	chrX	45411095	45419697	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01204	ENSG00000229563	85691	AL020989.1	ENSG00000237782	29100	None	None
L1FLnI_Xp11.3z	L1	L1	L1FLnI	chrX	45456819	45465439	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01204	ENSG00000229563	39949	AL020989.1	ENSG00000237782	74824	None	None
L1FLnI_Xp11.3aa	L1	L1	L1FLnI	chrX	45466213	45475720	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01204	ENSG00000229563	29668	AL020989.1	ENSG00000237782	84218	None	None
L1FLnI_Xp11.3ba	L1	L1	L1FLnI	chrX	45492182	45501054	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01204	ENSG00000229563	4334	AL020989.1	ENSG00000237782	110187	None	None
L1FLnI_Xp11.3ca	L1	L1	L1FLnI	chrX	45669163	45678833	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P14	ENSG00000214282	35430	AC234772.1	ENSG00000204915	51919	None	None
L1FLnI_Xp11.3da	L1	L1	L1FLnI	chrX	45997820	46007981	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PCNAP3	ENSG00000214009	50770	KRT18P68	ENSG00000213100	13456	None	None
L1FLnI_Xp11.3ea	L1	L1	L1FLnI	chrX	46074056	46084236	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01186	ENSG00000236751	172523	AL034410.1	ENSG00000278838	121	chrX:46083661-46083751	None
L1FLnI_Xp11.3fa	L1	L1	L1FLnI	chrX	46083321	46093773	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL034410.1	ENSG00000278838	9386	LINC01186	ENSG00000236751	162986	chrX:46083661-46083751	None
L1FLnI_Xp11.3ga	L1	L1	L1FLnI	chrX	46100362	46110508	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL034410.1	ENSG00000278838	26427	LINC01186	ENSG00000236751	146251	None	None
L1FLnI_Xp11.3ha	L1	L1	L1FLnI	chrX	46173053	46181830	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01186	ENSG00000236751	74929	AL034410.1	ENSG00000278838	99118	None	None
L1FLnI_Xp11.3ia	L1	L1	L1FLnI	chrX	46409396	46419538	-	coding	AL139811.2	processed_pseudogene	SENSE	ENSG00000231235	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.3ja	L1	L1	L1FLnI	chrX	46651859	46661885	+	coding	SLC9A7	protein_coding	ANTISENSE	ENSG00000065923	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrX:46653985-46653990,chrX:46653961-46653968
L1FLI_Xp11.23	L1	L1	L1FLI	chrX	47782658	47790701	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	WASF4P	ENSG00000188459	12595	AL022578.1	ENSG00000229968	3961	None	None
L1FLnI_Xp11.23a	L1	L1	L1FLnI	chrX	48429982	48439197	+	coding	AL606490.8	unprocessed_pseudogene	SENSE	ENSG00000235350	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.23b	L1	L1	L1FLnI	chrX	49619564	49629705	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	VDAC1P2	ENSG00000213856	2795	GAGE1	ENSG00000205777	11028	None	None
L1FLnI_Xp11.23c	L1	L1	L1FLnI	chrX	50018978	50029005	-	coding	CLCN5	protein_coding	ANTISENSE	ENSG00000171365	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.23d	L1	L1	L1FLnI	chrX	50056645	50066675	+	coding	CLCN5	protein_coding	SENSE	ENSG00000171365	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.22a	L1	L1	L1FLnI	chrX	50217790	50227486	-	noncoding	CCNB3	protein_coding	ANTISENSE	ENSG00000147082	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.22b	L1	L1	L1FLnI	chrX	50295640	50305779	-	noncoding	CCNB3	protein_coding	ANTISENSE	ENSG00000147082	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.22c	L1	L1	L1FLnI	chrX	50537050	50545882	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DGKK	ENSG00000274588	66225	SHROOM4	ENSG00000158352	45765	None	None
L1FLnI_Xp11.22d	L1	L1	L1FLnI	chrX	51012150	51022302	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC239367.1	ENSG00000227493	8120	HMGB1P15	ENSG00000238190	80602	None	None
L1FLnI_Xp11.22e	L1	L1	L1FLnI	chrX	51012159	51022302	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC239367.1	ENSG00000227493	8120	HMGB1P15	ENSG00000238190	80611	None	None
L1FLnI_Xp11.22f	L1	L1	L1FLnI	chrX	51109630	51118375	+	coding	LINC01284	lncRNA	ANTISENSE	ENSG00000230317	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.22g	L1	L1	L1FLnI	chrX	51258593	51268661	+	coding	AC233976.1	lncRNA	ANTISENSE	ENSG00000229151	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.22h	L1	L1	L1FLnI	chrX	51359371	51368280	+	noncoding	AC233976.1	lncRNA	ANTISENSE	ENSG00000229151	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.22i	L1	L1	L1FLnI	chrX	51364291	51375787	+	noncoding	AC233976.1	lncRNA	ANTISENSE	ENSG00000229151	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.22j	L1	L1	L1FLnI	chrX	51426950	51437099	-	coding	AL158055.1	lncRNA	ANTISENSE	ENSG00000226530	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.22k	L1	L1	L1FLnI	chrX	51511817	51521844	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CENPVL3	ENSG00000224109	95180	LINC01496	ENSG00000234766	812	None	None
L1FLnI_Xp11.22l	L1	L1	L1FLnI	chrX	51531074	51541094	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CENPVL3	ENSG00000224109	75930	LINC01496	ENSG00000234766	20069	None	None
L1FLnI_Xp11.22m	L1	L1	L1FLnI	chrX	51531087	51541094	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CENPVL3	ENSG00000224109	75930	LINC01496	ENSG00000234766	20082	None	None
L1FLnI_Xp11.22n	L1	L1	L1FLnI	chrX	51549874	51559986	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CENPVL3	ENSG00000224109	57038	LINC01496	ENSG00000234766	38869	None	None
L1FLnI_Xp11.22o	L1	L1	L1FLnI	chrX	51573477	51582280	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01496	ENSG00000234766	62472	CENPVL3	ENSG00000224109	34744	None	None
L1FLnI_Xp11.22p	L1	L1	L1FLnI	chrX	51619643	51629761	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CENPVL3	ENSG00000224109	675	CENPVL2	ENSG00000283093	51451	None	None
L1FLnI_Xp11.22q	L1	L1	L1FLnI	chrX	51641260	51651270	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CENPVL3	ENSG00000224109	22292	CENPVL2	ENSG00000283093	29942	None	None
L1FLnI_Xp11.22r	L1	L1	L1FLnI	chrX	51958867	51969027	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TPMTP3	ENSG00000232562	10196	AL929410.2	ENSG00000237528	35127	None	None
L1FLnI_Xp11.22s	L1	L1	L1FLnI	chrX	51990824	52000923	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC239585.1	ENSG00000182776	49937	TPMTP3	ENSG00000232562	10812	None	None
L1FLnI_Xp11.22t	L1	L1	L1FLnI	chrX	52019933	52030084	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC239585.1	ENSG00000182776	20776	TPMTP3	ENSG00000232562	39921	None	None
L1FLnI_Xp11.22u	L1	L1	L1FLnI	chrX	52019949	52030084	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC239585.1	ENSG00000182776	20776	TPMTP3	ENSG00000232562	39937	None	None
L1FLnI_Xp11.22v	L1	L1	L1FLnI	chrX	52082848	52093103	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MAGED4	ENSG00000154545	91720	MAGED4B	ENSG00000187243	13600	None	None
L1FLnI_Xp11.22w	L1	L1	L1FLnI	chrX	52099896	52110249	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MAGED4	ENSG00000154545	74574	MAGED4B	ENSG00000187243	30648	None	None
L1FLnI_Xp11.22x	L1	L1	L1FLnI	chrX	52107624	52117765	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MAGED4B	ENSG00000187243	38376	MAGED4	ENSG00000154545	67058	None	None
L1FLnI_Xp11.22y	L1	L1	L1FLnI	chrX	52115657	52125812	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MAGED4B	ENSG00000187243	46409	MAGED4	ENSG00000154545	59011	None	None
L1FLnI_Xp11.22z	L1	L1	L1FLnI	chrX	52144828	52154780	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAGED4	ENSG00000154545	30043	MAGED4B	ENSG00000187243	75580	None	None
L1FLnI_Xp11.22aa	L1	L1	L1FLnI	chrX	52156423	52166560	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAGED4B	ENSG00000187243	87175	MAGED4	ENSG00000154545	18263	None	None
L1FLnI_Xp11.22ba	L1	L1	L1FLnI	chrX	52156423	52166556	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAGED4B	ENSG00000187243	87175	MAGED4	ENSG00000154545	18267	None	None
L1FLnI_Xp11.22ca	L1	L1	L1FLnI	chrX	52167279	52177421	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MAGED4B	ENSG00000187243	98031	MAGED4	ENSG00000154545	7402	None	None
L1FLnI_Xp11.22da	L1	L1	L1FLnI	chrX	52218607	52228625	+	coding	AC231759.2	lncRNA	ANTISENSE	ENSG00000287215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.22ea	L1	L1	L1FLnI	chrX	52288287	52298432	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC231759.2	ENSG00000287215	22368	AC231759.1	ENSG00000276474	27734	None	None
L1FLnI_Xp11.22fa	L1	L1	L1FLnI	chrX	52393356	52402064	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC231532.2	ENSG00000276897	7708	AC231532.1	ENSG00000225957	7742	None	None
L1FLnI_Xp11.22ga	L1	L1	L1FLnI	chrX	52842974	52853171	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	XAGE3	ENSG00000171402	9354	EIF4A2P4	ENSG00000224781	9075	None	None
L1FLnI_Xp11.22ha	L1	L1	L1FLnI	chrX	53779864	53790023	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	BX323845.2	ENSG00000226110	10645	BX323845.3	ENSG00000229037	17753	None	None
L1FLnI_Xp11.22ia	L1	L1	L1FLnI	chrX	53847655	53858069	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP505	ENSG00000201618	50985	AC233279.1	ENSG00000235916	21346	None	None
L1FLnI_Xp11.22ja	L1	L1	L1FLnI	chrX	53885428	53895039	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC233279.1	ENSG00000235916	59119	RNA5SP505	ENSG00000201618	14015	None	None
L1FLI_Xp11.22	L1	L1	L1FLI	chrX	54117701	54125747	-	coding	FAM120C	protein_coding	SENSE	ENSG00000184083	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.22ka	L1	L1	L1FLnI	chrX	54592335	54601654	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGAM4P1	ENSG00000215197	70331	GNL3L	ENSG00000130119	25046	None	None
L1FLnI_Xp11.22la	L1	L1	L1FLnI	chrX	54607858	54618444	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PGAM4P1	ENSG00000215197	53541	GNL3L	ENSG00000130119	40569	None	None
L1FLnI_Xp11.22ma	L1	L1	L1FLnI	chrX	54694001	54702545	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PGAM4P1	ENSG00000215197	21363	ITIH6	ENSG00000102313	46373	None	chrX:54695714-54695715
L1FLnI_Xp11.22na	L1	L1	L1FLnI	chrX	54765207	54773904	-	coding	ITIH6	protein_coding	SENSE	ENSG00000102313	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21a	L1	L1	L1FLnI	chrX	54835122	54843884	-	noncoding	AL049732.1	unprocessed_pseudogene	ANTISENSE	ENSG00000275387	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21b	L1	L1	L1FLnI	chrX	54853433	54863601	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TRO	ENSG00000067445	56861	AL049732.1	ENSG00000275387	11299	None	None
L1FLnI_Xp11.21c	L1	L1	L1FLnI	chrX	54853447	54863601	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TRO	ENSG00000067445	56861	AL049732.1	ENSG00000275387	11313	None	None
L1FLnI_Xp11.21d	L1	L1	L1FLnI	chrX	54878089	54886719	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TRO	ENSG00000067445	33743	AL049732.1	ENSG00000275387	35955	None	None
L1FLnI_Xp11.21e	L1	L1	L1FLnI	chrX	54884796	54894020	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049732.1	ENSG00000275387	42662	TRO	ENSG00000067445	26442	None	None
L1FLnI_Xp11.21f	L1	L1	L1FLnI	chrX	55046436	55056440	-	coding	AL590240.2	processed_pseudogene	SENSE	ENSG00000234466	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21g	L1	L1	L1FLnI	chrX	55060952	55069577	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PAGE2B	ENSG00000238269	5453	AL590240.2	ENSG00000234466	5114	None	None
L1FLnI_Xp11.21h	L1	L1	L1FLnI	chrX	55066562	55077014	-	coding	PAGE2B	protein_coding	ANTISENSE	ENSG00000238269	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	chrX:55075017-55075049,chrX:55075062-55075086
L1FLnI_Xp11.21i	L1	L1	L1FLnI	chrX	55297156	55307290	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4536-2	ENSG00000266328	144205	AL158819.1	ENSG00000232765	8371	None	None
L1FLnI_Xp11.21j	L1	L1	L1FLnI	chrX	55352657	55363233	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158819.1	ENSG00000232765	63872	MIR4536-2	ENSG00000266328	88262	None	None
L1FLnI_Xp11.21k	L1	L1	L1FLnI	chrX	55393016	55403159	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158819.1	ENSG00000232765	104231	MIR4536-2	ENSG00000266328	48336	None	None
L1FLnI_Xp11.21l	L1	L1	L1FLnI	chrX	55412618	55421375	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158819.1	ENSG00000232765	123833	MIR4536-2	ENSG00000266328	30120	None	None
L1FLnI_Xp11.21m	L1	L1	L1FLnI	chrX	55423018	55433178	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL158819.1	ENSG00000232765	134233	MIR4536-2	ENSG00000266328	18317	None	None
L1FLnI_Xp11.21n	L1	L1	L1FLnI	chrX	55431191	55440063	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158819.1	ENSG00000232765	142406	MIR4536-2	ENSG00000266328	11432	None	None
L1FLnI_Xp11.21o	L1	L1	L1FLnI	chrX	55439739	55449915	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158819.1	ENSG00000232765	150954	MIR4536-2	ENSG00000266328	1580	None	None
L1FLnI_Xp11.21p	L1	L1	L1FLnI	chrX	55600023	55610435	-	noncoding	AL627224.2	processed_pseudogene	SENSE	ENSG00000235136	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21q	L1	L1	L1FLnI	chrX	55623741	55632268	+	coding	FOXR2	protein_coding	SENSE	ENSG00000189299	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21r	L1	L1	L1FLnI	chrX	55667834	55678013	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RRAGB	ENSG00000083750	39726	AL159987.1	ENSG00000169164	10820	None	None
L1FLnI_Xp11.21s	L1	L1	L1FLnI	chrX	55680655	55690683	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RRAGB	ENSG00000083750	27056	AL159987.1	ENSG00000169164	23641	None	None
L1FLnI_Xp11.21t	L1	L1	L1FLnI	chrX	55698627	55709088	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL159987.1	ENSG00000169164	41613	RRAGB	ENSG00000083750	8651	None	None
L1FLnI_Xp11.21u	L1	L1	L1FLnI	chrX	55768423	55778544	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL050309.1	ENSG00000227486	129579	RRAGB	ENSG00000083750	9649	None	None
L1FLnI_Xp11.21v	L1	L1	L1FLnI	chrX	55805576	55815682	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL050309.1	ENSG00000227486	92441	RRAGB	ENSG00000083750	46802	None	None
L1FLnI_Xp11.21w	L1	L1	L1FLnI	chrX	55823593	55833738	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RRAGB	ENSG00000083750	64819	AL050309.1	ENSG00000227486	74385	None	None
L1FLnI_Xp11.21x	L1	L1	L1FLnI	chrX	55845262	55855417	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL050309.1	ENSG00000227486	52706	RRAGB	ENSG00000083750	86488	None	None
L1FLnI_Xp11.21y	L1	L1	L1FLnI	chrX	55874981	55884951	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RRAGB	ENSG00000083750	116207	AL050309.1	ENSG00000227486	23172	None	None
L1FLnI_Xp11.21z	L1	L1	L1FLnI	chrX	55927865	55936394	-	noncoding	AL050309.1	lncRNA	ANTISENSE	ENSG00000227486	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21aa	L1	L1	L1FLnI	chrX	55932893	55943028	+	coding	AL050309.1	lncRNA	SENSE	ENSG00000227486	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21ba	L1	L1	L1FLnI	chrX	56046767	56056780	-	coding	AL050309.1	lncRNA	ANTISENSE	ENSG00000227486	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21ca	L1	L1	L1FLnI	chrX	56057842	56067413	-	noncoding	AL050309.1	lncRNA	ANTISENSE	ENSG00000227486	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21da	L1	L1	L1FLnI	chrX	56075645	56084846	-	coding	AL050309.1	lncRNA	ANTISENSE	ENSG00000227486	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21ea	L1	L1	L1FLnI	chrX	56102532	56111360	-	noncoding	AL050309.1	lncRNA	ANTISENSE	ENSG00000227486	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chrX:56107415-56107422
L1FLnI_Xp11.21fa	L1	L1	L1FLnI	chrX	56125651	56136210	+	noncoding	AL050309.1	lncRNA	SENSE	ENSG00000227486	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21ga	L1	L1	L1FLnI	chrX	56125651	56136223	+	noncoding	AL050309.1	lncRNA	SENSE	ENSG00000227486	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21ha	L1	L1	L1FLnI	chrX	56156910	56166417	-	coding	AL050309.1	lncRNA	ANTISENSE	ENSG00000227486	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21ia	L1	L1	L1FLnI	chrX	56171616	56181709	-	coding	AL050309.1	lncRNA	ANTISENSE	ENSG00000227486	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21ja	L1	L1	L1FLnI	chrX	56177712	56187097	-	coding	AL050309.1	lncRNA	ANTISENSE	ENSG00000227486	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21ka	L1	L1	L1FLnI	chrX	56180382	56190530	+	coding	AL050309.1	lncRNA	SENSE	ENSG00000227486	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21la	L1	L1	L1FLnI	chrX	56190595	56200736	+	noncoding	AL050309.1	lncRNA	SENSE	ENSG00000227486	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21ma	L1	L1	L1FLnI	chrX	56289015	56297593	+	coding	KLF8	protein_coding	SENSE	ENSG00000102349	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21na	L1	L1	L1FLnI	chrX	56324467	56334639	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	UBQLN2	ENSG00000188021	229000	KLF8	ENSG00000102349	32936	None	None
L1FLnI_Xp11.21oa	L1	L1	L1FLnI	chrX	56335149	56345289	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	UBQLN2	ENSG00000188021	218350	KLF8	ENSG00000102349	43618	None	None
L1FLnI_Xp11.21pa	L1	L1	L1FLnI	chrX	56352121	56362272	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	UBQLN2	ENSG00000188021	201367	KLF8	ENSG00000102349	60590	None	None
L1FLnI_Xp11.21qa	L1	L1	L1FLnI	chrX	56367384	56376780	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	KLF8	ENSG00000102349	75853	UBQLN2	ENSG00000188021	186859	None	None
L1FLnI_Xp11.21ra	L1	L1	L1FLnI	chrX	56423561	56433708	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBQLN2	ENSG00000188021	129931	KLF8	ENSG00000102349	132030	None	None
L1FLnI_Xp11.21sa	L1	L1	L1FLnI	chrX	56430700	56440188	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	UBQLN2	ENSG00000188021	123451	KLF8	ENSG00000102349	139169	None	None
L1FLnI_Xp11.21ta	L1	L1	L1FLnI	chrX	56433160	56442649	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	KLF8	ENSG00000102349	141629	UBQLN2	ENSG00000188021	120990	None	None
L1FLnI_Xp11.21ua	L1	L1	L1FLnI	chrX	56454701	56464748	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	UBQLN2	ENSG00000188021	98891	KLF8	ENSG00000102349	163170	None	None
L1FLnI_Xp11.21va	L1	L1	L1FLnI	chrX	56463583	56473236	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBQLN2	ENSG00000188021	90403	KLF8	ENSG00000102349	172052	None	None
L1FLnI_Xp11.21wa	L1	L1	L1FLnI	chrX	56489031	56499084	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBQLN2	ENSG00000188021	64555	KLF8	ENSG00000102349	197500	None	None
L1FLnI_Xp11.21xa	L1	L1	L1FLnI	chrX	56489035	56499084	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBQLN2	ENSG00000188021	64555	KLF8	ENSG00000102349	197504	None	None
L1FLnI_Xp11.21ya	L1	L1	L1FLnI	chrX	56581021	56591172	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL354793.1	ENSG00000230105	27219	UBQLN2	ENSG00000188021	13153	None	None
L1FLnI_Xp11.21za	L1	L1	L1FLnI	chrX	56591202	56601636	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL354793.1	ENSG00000230105	16755	UBQLN2	ENSG00000188021	23334	None	None
L1FLnI_Xp11.21ab	L1	L1	L1FLnI	chrX	56629080	56639220	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NBDY	ENSG00000204272	90021	AL354793.1	ENSG00000230105	4622	None	None
L1FLnI_Xp11.21bb	L1	L1	L1FLnI	chrX	56632510	56642663	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL354793.1	ENSG00000230105	8052	NBDY	ENSG00000204272	86578	None	None
L1FLnI_Xp11.21cb	L1	L1	L1FLnI	chrX	56670202	56680346	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL354793.1	ENSG00000230105	45744	NBDY	ENSG00000204272	48895	None	None
L1FLnI_Xp11.21db	L1	L1	L1FLnI	chrX	56692386	56702416	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL354793.1	ENSG00000230105	67928	NBDY	ENSG00000204272	26825	None	None
L1FLnI_Xp11.21eb	L1	L1	L1FLnI	chrX	56739018	56747914	-	noncoding	NBDY	protein_coding	ANTISENSE	ENSG00000204272	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21fb	L1	L1	L1FLnI	chrX	56805326	56815710	-	noncoding	NBDY	protein_coding	ANTISENSE	ENSG00000204272	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21gb	L1	L1	L1FLnI	chrX	56842945	56852259	+	noncoding	SPIN3	protein_coding	ANTISENSE	ENSG00000204271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21hb	L1	L1	L1FLnI	chrX	56865504	56875625	+	coding	SPIN3	protein_coding	ANTISENSE	ENSG00000204271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21ib	L1	L1	L1FLnI	chrX	56890433	56900571	+	coding	SPIN3	protein_coding	ANTISENSE	ENSG00000204271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21jb	L1	L1	L1FLnI	chrX	56906455	56916597	-	noncoding	SPIN3	protein_coding	SENSE	ENSG00000204271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21kb	L1	L1	L1FLnI	chrX	56914792	56924794	-	noncoding	SPIN3	protein_coding	SENSE	ENSG00000204271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21lb	L1	L1	L1FLnI	chrX	56937405	56945916	-	coding	SPIN3	protein_coding	SENSE	ENSG00000204271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21mb	L1	L1	L1FLnI	chrX	57031664	57041970	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL139397.2	ENSG00000237708	26944	SPIN3	ENSG00000204271	35837	None	None
L1FLnI_Xp11.21nb	L1	L1	L1FLnI	chrX	57078759	57087973	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL139397.2	ENSG00000237708	9074	SPIN2B	ENSG00000186787	30578	None	None
L1FLnI_Xp11.21ob	L1	L1	L1FLnI	chrX	57090843	57101258	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL139397.2	ENSG00000237708	21158	SPIN2B	ENSG00000186787	17293	None	None
L1FLnI_Xp11.21pb	L1	L1	L1FLnI	chrX	57147551	57156418	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z83745.1	ENSG00000286977	66288	SPIN2A	ENSG00000147059	9926	None	None
L1FLnI_Xp11.21qb	L1	L1	L1FLnI	chrX	57157351	57167386	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	Z83745.1	ENSG00000286977	55320	SPIN2A	ENSG00000147059	19726	None	None
L1FLnI_Xp11.21rb	L1	L1	L1FLnI	chrX	57248228	57258204	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPP1R11P2	ENSG00000231765	18813	FAAH2	ENSG00000165591	28502	None	None
L1FLnI_Xp11.21sb	L1	L1	L1FLnI	chrX	57261328	57271016	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPP1R11P2	ENSG00000231765	31913	FAAH2	ENSG00000165591	15690	None	None
L1FLnI_Xp11.21tb	L1	L1	L1FLnI	chrX	57267042	57275768	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PPP1R11P2	ENSG00000231765	37627	FAAH2	ENSG00000165591	10938	None	chrX:57275267-57275268
L1FLnI_Xp11.21ub	L1	L1	L1FLnI	chrX	57291988	57302117	+	coding	FAAH2	protein_coding	SENSE	ENSG00000165591	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21vb	L1	L1	L1FLnI	chrX	57291988	57302107	+	coding	FAAH2	protein_coding	SENSE	ENSG00000165591	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21wb	L1	L1	L1FLnI	chrX	57322312	57331850	-	noncoding	FAAH2	protein_coding	ANTISENSE	ENSG00000165591	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21xb	L1	L1	L1FLnI	chrX	57322338	57331850	-	noncoding	FAAH2	protein_coding	ANTISENSE	ENSG00000165591	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21yb	L1	L1	L1FLnI	chrX	57342115	57351590	-	noncoding	FAAH2	protein_coding	ANTISENSE	ENSG00000165591	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21zb	L1	L1	L1FLnI	chrX	57346072	57355088	+	noncoding	FAAH2	protein_coding	SENSE	ENSG00000165591	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21ac	L1	L1	L1FLnI	chrX	57411713	57422189	-	coding	FAAH2	protein_coding	ANTISENSE	ENSG00000165591	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21bc	L1	L1	L1FLnI	chrX	57420710	57429553	+	noncoding	FAAH2	protein_coding	SENSE	ENSG00000165591	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21cc	L1	L1	L1FLnI	chrX	57438104	57448222	-	noncoding	FAAH2	protein_coding	ANTISENSE	ENSG00000165591	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21dc	L1	L1	L1FLnI	chrX	57449861	57458842	+	noncoding	FAAH2	protein_coding	SENSE	ENSG00000165591	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21ec	L1	L1	L1FLnI	chrX	57455031	57464104	+	noncoding	FAAH2	protein_coding	SENSE	ENSG00000165591	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21fc	L1	L1	L1FLnI	chrX	57463626	57472922	+	noncoding	FAAH2	protein_coding	SENSE	ENSG00000165591	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xp11.21gc	L1	L1	L1FLnI	chrX	57498258	57508392	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FAAH2	ENSG00000165591	9062	ZXDB	ENSG00000198455	83260	None	None
L1FLnI_Xp11.21hc	L1	L1	L1FLnI	chrX	57510415	57521151	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZXDB	ENSG00000198455	70501	FAAH2	ENSG00000165591	21219	None	None
L1FLnI_Xp11.21ic	L1	L1	L1FLnI	chrX	57536367	57545571	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FAAH2	ENSG00000165591	47171	ZXDB	ENSG00000198455	46081	None	None
L1FLnI_Xp11.21jc	L1	L1	L1FLnI	chrX	57609339	57618392	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NLRP2B	ENSG00000215174	58675	ZXDB	ENSG00000198455	11794	None	None
L1FLnI_Xp11.21kc	L1	L1	L1FLnI	chrX	57620071	57629880	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZXDB	ENSG00000198455	22526	NLRP2B	ENSG00000215174	47187	None	None
L1FLnI_Xp11.21lc	L1	L1	L1FLnI	chrX	57625890	57635909	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZXDB	ENSG00000198455	28345	NLRP2B	ENSG00000215174	41158	None	None
L1FLnI_Xp11.21mc	L1	L1	L1FLnI	chrX	57680860	57690916	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NLRP2B	ENSG00000215174	600	Z93019.1	ENSG00000227427	75404	None	None
L1FLnI_Xp11.21nc	L1	L1	L1FLnI	chrX	57705031	57715153	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NLRP2B	ENSG00000215174	24771	Z93019.1	ENSG00000227427	51167	None	None
L1FLnI_Xp11.21oc	L1	L1	L1FLnI	chrX	57724973	57734981	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	Z93019.1	ENSG00000227427	31339	NLRP2B	ENSG00000215174	44713	None	None
L1FLnI_Xp11.21pc	L1	L1	L1FLnI	chrX	57740506	57750763	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NLRP2B	ENSG00000215174	60246	Z93019.1	ENSG00000227427	15557	None	None
L1FLnI_Xp11.21qc	L1	L1	L1FLnI	chrX	57747873	57756477	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NLRP2B	ENSG00000215174	67613	Z93019.1	ENSG00000227427	9843	None	None
L1FLnI_Xp11.21rc	L1	L1	L1FLnI	chrX	57804539	57814048	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZXDA	ENSG00000198205	92660	Z93019.1	ENSG00000227427	37247	None	None
L1FLnI_Xp11.21sc	L1	L1	L1FLnI	chrX	57838288	57848401	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z93019.1	ENSG00000227427	70996	ZXDA	ENSG00000198205	58307	None	None
L1FLnI_Xp11.21tc	L1	L1	L1FLnI	chrX	57851883	57861643	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z93019.1	ENSG00000227427	84591	ZXDA	ENSG00000198205	45065	None	None
L1FLnI_Xp11.21uc	L1	L1	L1FLnI	chrX	57859696	57869805	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z93019.1	ENSG00000227427	92404	ZXDA	ENSG00000198205	36903	None	None
L1FLnI_Xp11.21vc	L1	L1	L1FLnI	chrX	57888070	57898863	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z93019.1	ENSG00000227427	120778	ZXDA	ENSG00000198205	7845	None	None
L1FLnI_Xp11.21wc	L1	L1	L1FLnI	chrX	58008073	58018022	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX322784.1	ENSG00000236852	4761228	KRT8P17	ENSG00000235124	21940	None	None
L1FLnI_Xp11.21xc	L1	L1	L1FLnI	chrX	58008745	58018022	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX322784.1	ENSG00000236852	4761228	KRT8P17	ENSG00000235124	22612	None	None
L1FLnI_Xp11.21yc	L1	L1	L1FLnI	chrX	58015093	58024091	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P17	ENSG00000235124	28960	BX322784.1	ENSG00000236852	4755159	None	None
L1FLnI_Xp11.1a	L1	L1	L1FLnI	chrX	58104599	58114748	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P17	ENSG00000235124	118466	BX322784.1	ENSG00000236852	4664502	None	None
L1FLnI_Xp11.1b	L1	L1	L1FLnI	chrX	58393730	58402285	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P17	ENSG00000235124	407597	BX322784.1	ENSG00000236852	4376965	None	None
L1FLnI_Xp11.1c	L1	L1	L1FLnI	chrX	58506864	58517287	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P17	ENSG00000235124	520731	BX322784.1	ENSG00000236852	4261963	None	None
L1FLnI_Xq11.1a	L1	L1	L1FLnI	chrX	62513605	62523625	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P17	ENSG00000235124	4527472	BX322784.1	ENSG00000236852	255625	None	None
L1FLnI_Xq11.1b	L1	L1	L1FLnI	chrX	62551938	62562101	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P17	ENSG00000235124	4565805	BX322784.1	ENSG00000236852	217149	None	None
L1FLnI_Xq11.1c	L1	L1	L1FLnI	chrX	62739087	62748852	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P17	ENSG00000235124	4752954	BX322784.1	ENSG00000236852	30398	None	None
L1FLnI_Xq11.1d	L1	L1	L1FLnI	chrX	62884317	62894754	+	coding	ZFRP1	processed_pseudogene	ANTISENSE	ENSG00000234570	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrX:62884882-62884906
L1FLnI_Xq11.1e	L1	L1	L1FLnI	chrX	62900783	62910615	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359854.1	ENSG00000277499	176456	ZFRP1	ENSG00000234570	15941	None	None
L1FLnI_Xq11.1f	L1	L1	L1FLnI	chrX	62943446	62952214	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZFRP1	ENSG00000234570	58604	AL359854.1	ENSG00000277499	134857	None	None
L1FLnI_Xq11.1g	L1	L1	L1FLnI	chrX	63091752	63101039	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC01278	ENSG00000235437	121954	AL359854.1	ENSG00000277499	3088	None	None
L1FLnI_Xq11.1h	L1	L1	L1FLnI	chrX	63099420	63109562	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359854.1	ENSG00000277499	10756	LINC01278	ENSG00000235437	113431	None	None
L1FLnI_Xq11.1i	L1	L1	L1FLnI	chrX	63105570	63114778	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359854.1	ENSG00000277499	16906	LINC01278	ENSG00000235437	108215	None	None
L1FLnI_Xq11.1j	L1	L1	L1FLnI	chrX	63260578	63270429	-	coding	LINC01278	lncRNA	SENSE	ENSG00000235437	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq11.1k	L1	L1	L1FLnI	chrX	63285506	63295573	-	coding	LINC01278	lncRNA	SENSE	ENSG00000235437	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq11.1l	L1	L1	L1FLnI	chrX	63327227	63337881	+	coding	LINC01278	lncRNA	ANTISENSE	ENSG00000235437	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq11.1m	L1	L1	L1FLnI	chrX	63327227	63336517	+	coding	LINC01278	lncRNA	ANTISENSE	ENSG00000235437	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq11.1n	L1	L1	L1FLnI	chrX	63363940	63373701	+	noncoding	LINC01278	lncRNA	ANTISENSE	ENSG00000235437	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq11.1o	L1	L1	L1FLnI	chrX	63363940	63373725	+	noncoding	LINC01278	lncRNA	ANTISENSE	ENSG00000235437	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq11.1p	L1	L1	L1FLnI	chrX	63445965	63455982	-	noncoding	LINC01278	lncRNA	SENSE	ENSG00000235437	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq11.1q	L1	L1	L1FLnI	chrX	63476032	63484967	+	noncoding	LINC01278	lncRNA	ANTISENSE	ENSG00000235437	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq11.1r	L1	L1	L1FLnI	chrX	63488593	63498752	+	noncoding	LINC01278	lncRNA	ANTISENSE	ENSG00000235437	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq11.1s	L1	L1	L1FLnI	chrX	63515658	63525777	+	coding	LINC01278	lncRNA	ANTISENSE	ENSG00000235437	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq11.1t	L1	L1	L1FLnI	chrX	63525046	63533557	+	noncoding	LINC01278	lncRNA	ANTISENSE	ENSG00000235437	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq11.1u	L1	L1	L1FLnI	chrX	63533208	63542077	+	noncoding	LINC01278	lncRNA	ANTISENSE	ENSG00000235437	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq11.1v	L1	L1	L1FLnI	chrX	63596697	63606723	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ARHGEF9	ENSG00000131089	28244	LINC01278	ENSG00000235437	35602	None	None
L1FLnI_Xq11.1w	L1	L1	L1FLnI	chrX	63685292	63693852	+	noncoding	ARHGEF9	protein_coding	ANTISENSE	ENSG00000131089	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq11.1x	L1	L1	L1FLnI	chrX	63793979	63804407	+	coding	ARHGEF9	protein_coding	ANTISENSE	ENSG00000131089	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq11.2a	L1	L1	L1FLnI	chrX	63835144	63845290	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ARHGEF9	ENSG00000131089	25870	HNRNPDP1	ENSG00000232794	199015	None	None
L1FLnI_Xq11.2b	L1	L1	L1FLnI	chrX	63859879	63869963	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPDP1	ENSG00000232794	174342	ARHGEF9	ENSG00000131089	50605	None	None
L1FLnI_Xq11.2c	L1	L1	L1FLnI	chrX	63933080	63941937	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ARHGEF9	ENSG00000131089	123806	HNRNPDP1	ENSG00000232794	102368	None	None
L1FLI_Xq11.2	L1	L1	L1FLI	chrX	64012237	64020288	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPDP1	ENSG00000232794	24017	ARHGEF9	ENSG00000131089	202963	None	None
L1FLnI_Xq11.2d	L1	L1	L1FLnI	chrX	64033984	64042887	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARHGEF9	ENSG00000131089	224710	HNRNPDP1	ENSG00000232794	1418	None	None
L1FLnI_Xq11.2e	L1	L1	L1FLnI	chrX	64057005	64066837	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL355852.1	ENSG00000226010	78035	HNRNPDP1	ENSG00000232794	11947	None	None
L1FLnI_Xq11.2f	L1	L1	L1FLnI	chrX	64078365	64088494	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL355852.1	ENSG00000226010	56378	HNRNPDP1	ENSG00000232794	33307	None	None
L1FLnI_Xq11.2g	L1	L1	L1FLnI	chrX	64081898	64092253	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPDP1	ENSG00000232794	36840	AL355852.1	ENSG00000226010	52619	None	None
L1FLnI_Xq11.2h	L1	L1	L1FLnI	chrX	64108230	64117690	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL355852.1	ENSG00000226010	27182	HNRNPDP1	ENSG00000232794	63172	None	None
L1FLnI_Xq11.2i	L1	L1	L1FLnI	chrX	64131380	64141407	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL355852.1	ENSG00000226010	3465	HNRNPDP1	ENSG00000232794	86322	None	None
L1FLnI_Xq11.2j	L1	L1	L1FLnI	chrX	64242970	64252966	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTMR8	ENSG00000102043	15115	AL356317.2	ENSG00000287370	9115	None	None
L1FLnI_Xq11.2k	L1	L1	L1FLnI	chrX	64251845	64261875	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTMR8	ENSG00000102043	6206	AL356317.2	ENSG00000287370	17990	None	None
L1FLnI_Xq11.2l	L1	L1	L1FLnI	chrX	64279342	64289523	+	noncoding	MTMR8	protein_coding	ANTISENSE	ENSG00000102043	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq11.2m	L1	L1	L1FLnI	chrX	64296084	64306091	-	coding	MTMR8,AL356317.1	protein_coding,processed_pseudogene	SENSE,SENSE	ENSG00000102043,ENSG00000213754	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq11.2n	L1	L1	L1FLnI	chrX	64360118	64370272	+	coding	MTMR8	protein_coding	ANTISENSE	ENSG00000102043	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq11.2o	L1	L1	L1FLnI	chrX	64457093	64469178	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	YWHAZP7	ENSG00000227261	143454	SHC1P1	ENSG00000230889	22948	None	None
L1FLnI_Xq11.2p	L1	L1	L1FLnI	chrX	64459736	64469178	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	YWHAZP7	ENSG00000227261	143454	SHC1P1	ENSG00000230889	25591	None	None
L1FLnI_Xq11.2q	L1	L1	L1FLnI	chrX	64477856	64488017	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	YWHAZP7	ENSG00000227261	124615	SHC1P1	ENSG00000230889	43711	None	None
L1FLnI_Xq11.2r	L1	L1	L1FLnI	chrX	64477874	64488017	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	YWHAZP7	ENSG00000227261	124615	SHC1P1	ENSG00000230889	43729	None	None
L1FLnI_Xq11.2s	L1	L1	L1FLnI	chrX	64496711	64506733	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	YWHAZP7	ENSG00000227261	105899	SHC1P1	ENSG00000230889	62566	chrX:64503219-64503426	None
L1FLnI_Xq11.2t	L1	L1	L1FLnI	chrX	64543318	64553433	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	YWHAZP7	ENSG00000227261	59199	SHC1P1	ENSG00000230889	109173	None	None
L1FLnI_Xq11.2u	L1	L1	L1FLnI	chrX	64602482	64611112	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	YWHAZP7	ENSG00000227261	1520	SHC1P1	ENSG00000230889	168337	None	None
L1FLnI_Xq11.2v	L1	L1	L1FLnI	chrX	64689479	64699487	-	noncoding	GRPEL2P2	processed_pseudogene	SENSE	ENSG00000225814	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq11.2w	L1	L1	L1FLnI	chrX	64698759	64708263	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BLOC1S2P1	ENSG00000236982	18485	GRPEL2P2	ENSG00000225814	212	None	None
L1FLnI_Xq11.2x	L1	L1	L1FLnI	chrX	64698759	64707945	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BLOC1S2P1	ENSG00000236982	18803	GRPEL2P2	ENSG00000225814	212	None	None
L1FLnI_Xq11.2y	L1	L1	L1FLnI	chrX	64726773	64737321	-	noncoding	BLOC1S2P1	processed_pseudogene	SENSE	ENSG00000236982	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq11.2z	L1	L1	L1FLnI	chrX	64758571	64767340	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZC4H2	ENSG00000126970	148462	BLOC1S2P1	ENSG00000236982	31523	None	None
L1FLnI_Xq11.2aa	L1	L1	L1FLnI	chrX	64769534	64778069	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZC4H2	ENSG00000126970	137733	BLOC1S2P1	ENSG00000236982	42486	None	None
L1FLnI_Xq11.2ba	L1	L1	L1FLnI	chrX	64788771	64798981	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BLOC1S2P1	ENSG00000236982	61723	ZC4H2	ENSG00000126970	116821	None	None
L1FLnI_Xq11.2ca	L1	L1	L1FLnI	chrX	64804906	64815030	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BLOC1S2P1	ENSG00000236982	77858	ZC4H2	ENSG00000126970	100772	None	None
L1FLnI_Xq11.2da	L1	L1	L1FLnI	chrX	64811521	64820444	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BLOC1S2P1	ENSG00000236982	84473	ZC4H2	ENSG00000126970	95358	None	None
L1FLnI_Xq11.2ea	L1	L1	L1FLnI	chrX	64875192	64885185	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	BLOC1S2P1	ENSG00000236982	148144	ZC4H2	ENSG00000126970	30617	None	None
L1FLnI_Xq11.2fa	L1	L1	L1FLnI	chrX	64904497	64914268	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BLOC1S2P1	ENSG00000236982	177449	ZC4H2	ENSG00000126970	1534	None	None
L1FLnI_Xq11.2ga	L1	L1	L1FLnI	chrX	64928694	64937607	-	coding	ZC4H2	protein_coding	SENSE	ENSG00000126970	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq11.2ha	L1	L1	L1FLnI	chrX	64931046	64940525	+	coding	ZC4H2	protein_coding	ANTISENSE	ENSG00000126970	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq11.2ia	L1	L1	L1FLnI	chrX	65014730	65023427	+	noncoding	ZC4H2	protein_coding	ANTISENSE	ENSG00000126970	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq11.2ja	L1	L1	L1FLnI	chrX	65052612	65062724	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL445523.1	ENSG00000237971	122294	ZC4H2	ENSG00000126970	17899	None	None
L1FLnI_Xq11.2ka	L1	L1	L1FLnI	chrX	65060650	65071100	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445523.1	ENSG00000237971	113918	ZC4H2	ENSG00000126970	25937	None	None
L1FLnI_Xq11.2la	L1	L1	L1FLnI	chrX	65075670	65085915	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZC4H2	ENSG00000126970	40957	AL445523.1	ENSG00000237971	99103	None	None
L1FLnI_Xq11.2ma	L1	L1	L1FLnI	chrX	65157276	65167422	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445523.1	ENSG00000237971	17596	ZC4H2	ENSG00000126970	122563	None	None
L1FLnI_Xq11.2na	L1	L1	L1FLnI	chrX	65165547	65175657	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445523.1	ENSG00000237971	9361	ZC4H2	ENSG00000126970	130834	None	None
L1FLnI_Xq11.2oa	L1	L1	L1FLnI	chrX	65214681	65223762	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445523.1	ENSG00000237971	27416	CCT4P2	ENSG00000225569	47151	None	None
L1FLnI_Xq11.2pa	L1	L1	L1FLnI	chrX	65220884	65231047	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445523.1	ENSG00000237971	33619	CCT4P2	ENSG00000225569	39866	None	None
L1FLnI_Xq11.2qa	L1	L1	L1FLnI	chrX	65235797	65245812	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCT4P2	ENSG00000225569	25101	AL445523.1	ENSG00000237971	48532	chrX:65244725-65245060	None
L1FLnI_Xq11.2ra	L1	L1	L1FLnI	chrX	65236768	65245812	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCT4P2	ENSG00000225569	25101	AL445523.1	ENSG00000237971	49503	chrX:65244725-65245060	None
L1FLnI_Xq11.2sa	L1	L1	L1FLnI	chrX	65335630	65346208	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MORF4L1P5	ENSG00000231857	4397	AL441964.1	ENSG00000237963	10682	None	None
L1FLnI_Xq11.2ta	L1	L1	L1FLnI	chrX	65343213	65352980	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MORF4L1P5	ENSG00000231857	11980	AL441964.1	ENSG00000237963	3910	None	None
L1FLnI_Xq11.2ua	L1	L1	L1FLnI	chrX	65375098	65385025	+	coding	ZC3H12B	protein_coding	SENSE	ENSG00000102053	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq11.2va	L1	L1	L1FLnI	chrX	65384362	65393281	-	coding	ZC3H12B	protein_coding	ANTISENSE	ENSG00000102053	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq12a	L1	L1	L1FLnI	chrX	65614205	65624235	-	coding	MSN	protein_coding	ANTISENSE	ENSG00000147065	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq12b	L1	L1	L1FLnI	chrX	65758916	65769252	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NANOGP9	ENSG00000231809	3489	MSN	ENSG00000147065	16985	None	None
L1FLnI_Xq12c	L1	L1	L1FLnI	chrX	65850198	65860296	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL034397.2	ENSG00000237311	65540	AL450487.1	ENSG00000230039	27949	None	None
L1FLnI_Xq12d	L1	L1	L1FLnI	chrX	65914279	65922987	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL034397.2	ENSG00000237311	2849	AL450487.1	ENSG00000230039	92030	None	None
L1FLnI_Xq12e	L1	L1	L1FLnI	chrX	66101795	66111942	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HEPH	ENSG00000089472	50607	EIF4BP9	ENSG00000237294	25448	None	None
L1FLnI_Xq12f	L1	L1	L1FLnI	chrX	66122150	66131177	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HEPH	ENSG00000089472	31372	EIF4BP9	ENSG00000237294	45803	None	None
L1FLnI_Xq12g	L1	L1	L1FLnI	chrX	66180198	66190228	-	coding	HEPH	protein_coding	ANTISENSE	ENSG00000089472	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq12h	L1	L1	L1FLnI	chrX	66268161	66276737	+	noncoding	HEPH	protein_coding	SENSE	ENSG00000089472	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq12i	L1	L1	L1FLnI	chrX	66339915	66348604	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL157698.1	ENSG00000231356	12162	HEPH	ENSG00000089472	71048	None	None
L1FLnI_Xq12j	L1	L1	L1FLnI	chrX	66343787	66352604	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HEPH	ENSG00000089472	74920	AL157698.1	ENSG00000231356	8162	None	None
L1FLnI_Xq12k	L1	L1	L1FLnI	chrX	66343787	66352629	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HEPH	ENSG00000089472	74920	AL157698.1	ENSG00000231356	8137	None	None
L1FLnI_Xq12l	L1	L1	L1FLnI	chrX	66370777	66380218	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL592049.1	ENSG00000226820	57127	AL157698.1	ENSG00000231356	9001	None	None
L1FLnI_Xq12m	L1	L1	L1FLnI	chrX	66400319	66409145	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL592049.1	ENSG00000226820	28200	AL157698.1	ENSG00000231356	38543	None	None
L1FLnI_Xq12n	L1	L1	L1FLnI	chrX	66417293	66427646	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL592049.1	ENSG00000226820	9699	AL157698.1	ENSG00000231356	55517	None	None
L1FLnI_Xq12o	L1	L1	L1FLnI	chrX	66450343	66460491	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL592049.1	ENSG00000226820	9675	PKMP2	ENSG00000235892	37257	None	None
L1FLnI_Xq12p	L1	L1	L1FLnI	chrX	66487504	66496200	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL592049.1	ENSG00000226820	46836	PKMP2	ENSG00000235892	1548	None	None
L1FLnI_Xq12q	L1	L1	L1FLnI	chrX	66509412	66518623	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	EDA2R	ENSG00000131080	77014	PKMP2	ENSG00000235892	9988	None	None
L1FLnI_Xq12r	L1	L1	L1FLnI	chrX	66549991	66560286	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PKMP2	ENSG00000235892	50567	EDA2R	ENSG00000131080	35351	None	None
L1FLnI_Xq12s	L1	L1	L1FLnI	chrX	66549991	66560284	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PKMP2	ENSG00000235892	50567	EDA2R	ENSG00000131080	35353	None	None
L1FLnI_Xq12t	L1	L1	L1FLnI	chrX	66621134	66631859	+	noncoding	EDA2R	protein_coding	ANTISENSE	ENSG00000131080	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq12u	L1	L1	L1FLnI	chrX	66644334	66653853	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-394P	ENSG00000222667	22405	EDA2R	ENSG00000131080	5036	None	None
L1FLnI_Xq12v	L1	L1	L1FLnI	chrX	66686495	66696629	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL049641.1	ENSG00000226280	676944	RNU6-394P	ENSG00000222667	10131	None	None
L1FLnI_Xq12w	L1	L1	L1FLnI	chrX	66714802	66725258	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-394P	ENSG00000222667	38438	AL049641.1	ENSG00000226280	648315	None	None
L1FLnI_Xq12x	L1	L1	L1FLnI	chrX	66760555	66770456	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049641.1	ENSG00000226280	603117	RNU6-394P	ENSG00000222667	84191	None	None
L1FLnI_Xq12y	L1	L1	L1FLnI	chrX	66771333	66780505	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049641.1	ENSG00000226280	593068	RNU6-394P	ENSG00000222667	94969	None	None
L1FLnI_Xq12z	L1	L1	L1FLnI	chrX	66788548	66798668	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL049641.1	ENSG00000226280	574905	RNU6-394P	ENSG00000222667	112184	None	None
L1FLnI_Xq12aa	L1	L1	L1FLnI	chrX	66795462	66805534	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-394P	ENSG00000222667	119098	AL049641.1	ENSG00000226280	568039	None	None
L1FLnI_Xq12ba	L1	L1	L1FLnI	chrX	66924356	66934374	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL049641.1	ENSG00000226280	439199	RNU6-394P	ENSG00000222667	247992	None	None
L1FLnI_Xq12ca	L1	L1	L1FLnI	chrX	66924358	66934374	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL049641.1	ENSG00000226280	439199	RNU6-394P	ENSG00000222667	247994	None	None
L1FLnI_Xq12da	L1	L1	L1FLnI	chrX	66932024	66941100	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL049641.1	ENSG00000226280	432473	RNU6-394P	ENSG00000222667	255660	None	None
L1FLnI_Xq12ea	L1	L1	L1FLnI	chrX	66939294	66949317	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-394P	ENSG00000222667	262930	AL049641.1	ENSG00000226280	424256	None	None
L1FLnI_Xq12fa	L1	L1	L1FLnI	chrX	67022679	67032817	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-394P	ENSG00000222667	346315	AL049641.1	ENSG00000226280	340756	None	None
L1FLnI_Xq12ga	L1	L1	L1FLnI	chrX	67059508	67069634	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049641.1	ENSG00000226280	303939	RNU6-394P	ENSG00000222667	383144	None	None
L1FLnI_Xq12ha	L1	L1	L1FLnI	chrX	67059519	67069634	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049641.1	ENSG00000226280	303939	RNU6-394P	ENSG00000222667	383155	None	None
L1FLnI_Xq12ia	L1	L1	L1FLnI	chrX	67064168	67074513	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-394P	ENSG00000222667	387804	AL049641.1	ENSG00000226280	299060	None	None
L1FLnI_Xq12ja	L1	L1	L1FLnI	chrX	67082511	67093230	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049641.1	ENSG00000226280	280343	RNU6-394P	ENSG00000222667	406147	None	None
L1FLnI_Xq12ka	L1	L1	L1FLnI	chrX	67154507	67166189	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-394P	ENSG00000222667	478143	AL049641.1	ENSG00000226280	207384	None	None
L1FLnI_Xq12la	L1	L1	L1FLnI	chrX	67185957	67196074	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL049641.1	ENSG00000226280	177499	RNU6-394P	ENSG00000222667	509593	None	None
L1FLnI_Xq12ma	L1	L1	L1FLnI	chrX	67230599	67239507	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-394P	ENSG00000222667	554235	AL049641.1	ENSG00000226280	134066	None	None
L1FLnI_Xq12na	L1	L1	L1FLnI	chrX	67246431	67256851	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-394P	ENSG00000222667	570067	AL049641.1	ENSG00000226280	116722	None	None
L1FLnI_Xq12oa	L1	L1	L1FLnI	chrX	67275605	67284509	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-394P	ENSG00000222667	599241	AL049641.1	ENSG00000226280	89064	None	None
L1FLnI_Xq12pa	L1	L1	L1FLnI	chrX	67320819	67330263	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL049641.1	ENSG00000226280	43310	RNU6-394P	ENSG00000222667	644455	None	None
L1FLnI_Xq12qa	L1	L1	L1FLnI	chrX	67383057	67392885	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049641.1	ENSG00000226280	7537	AL049564.1	ENSG00000233710	140278	None	None
L1FLnI_Xq12ra	L1	L1	L1FLnI	chrX	67398467	67408198	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049564.1	ENSG00000233710	124965	AL049641.1	ENSG00000226280	22947	None	None
L1FLnI_Xq12sa	L1	L1	L1FLnI	chrX	67420882	67431325	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049564.1	ENSG00000233710	101838	AL049641.1	ENSG00000226280	45362	None	None
L1FLnI_Xq12ta	L1	L1	L1FLnI	chrX	67452657	67463074	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049641.1	ENSG00000226280	77137	AL049564.1	ENSG00000233710	70089	None	None
L1FLnI_Xq12ua	L1	L1	L1FLnI	chrX	67453912	67463074	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL049641.1	ENSG00000226280	78392	AL049564.1	ENSG00000233710	70089	None	None
L1FLnI_Xq12va	L1	L1	L1FLnI	chrX	67484835	67495006	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL049641.1	ENSG00000226280	109315	AL049564.1	ENSG00000233710	38157	None	None
L1FLnI_Xq12wa	L1	L1	L1FLnI	chrX	67626136	67636161	-	coding	AR	protein_coding	ANTISENSE	ENSG00000169083	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq12xa	L1	L1	L1FLnI	chrX	67626141	67636161	-	coding	AR	protein_coding	ANTISENSE	ENSG00000169083	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq12ya	L1	L1	L1FLnI	chrX	67658724	67668752	-	coding	AR	protein_coding	ANTISENSE	ENSG00000169083	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq12za	L1	L1	L1FLnI	chrX	67703142	67713276	-	noncoding	AR	protein_coding	ANTISENSE	ENSG00000169083	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq12ab	L1	L1	L1FLnI	chrX	67827078	67836249	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BMI1P1	ENSG00000234201	34183	AL157700.1	ENSG00000260118	177221	None	None
L1FLnI_Xq12bb	L1	L1	L1FLnI	chrX	67883456	67893592	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL157700.1	ENSG00000260118	119878	BMI1P1	ENSG00000234201	90561	None	None
L1FLnI_Xq12cb	L1	L1	L1FLnI	chrX	67883466	67893592	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL157700.1	ENSG00000260118	119878	BMI1P1	ENSG00000234201	90571	None	None
L1FLnI_Xq12db	L1	L1	L1FLnI	chrX	67939030	67949187	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	BMI1P1	ENSG00000234201	146135	AL157700.1	ENSG00000260118	64283	None	None
L1FLnI_Xq12eb	L1	L1	L1FLnI	chrX	68213417	68223439	+	noncoding	OPHN1	protein_coding	ANTISENSE	ENSG00000079482	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq12fb	L1	L1	L1FLnI	chrX	68221258	68231424	+	coding	OPHN1	protein_coding	ANTISENSE	ENSG00000079482	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq12gb	L1	L1	L1FLnI	chrX	68261045	68271253	+	coding	OPHN1	protein_coding	ANTISENSE	ENSG00000079482	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.1a	L1	L1	L1FLnI	chrX	68524023	68534429	-	noncoding	YIPF6	protein_coding	ANTISENSE	ENSG00000181704	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.1b	L1	L1	L1FLnI	chrX	68559283	68568253	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL31P63	ENSG00000236735	31846	RNU6-245P	ENSG00000206747	19734	None	None
L1FLnI_Xq13.1c	L1	L1	L1FLnI	chrX	68598776	68608904	+	coding	RPL31P63	processed_pseudogene	SENSE	ENSG00000236735	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1ORF2_Xq13.1	L1	L1	L1ORF2	chrX	68735242	68743413	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	STARD8	ENSG00000130052	9400	ACTR3P2	ENSG00000232267	27909	None	None
L1FLnI_Xq13.1d	L1	L1	L1FLnI	chrX	68772786	68782336	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ACTR3P2	ENSG00000232267	208	SERBP1P1	ENSG00000213740	1136	None	None
L1FLnI_Xq13.1e	L1	L1	L1FLnI	chrX	69003454	69012252	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PJA1	ENSG00000181191	148599	EFNB1	ENSG00000090776	161294	None	None
L1FLnI_Xq13.1f	L1	L1	L1FLnI	chrX	69347259	69357397	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00269	ENSG00000215162	137335	CYCSP43	ENSG00000231706	127946	None	None
L1FLnI_Xq13.1g	L1	L1	L1FLnI	chrX	69444873	69454892	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00269	ENSG00000215162	234949	CYCSP43	ENSG00000231706	30451	None	None
L1FLnI_Xq13.1h	L1	L1	L1FLnI	chrX	69444873	69454920	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	LINC00269	ENSG00000215162	234949	CYCSP43	ENSG00000231706	30423	None	None
L1FLnI_Xq13.1i	L1	L1	L1FLnI	chrX	69458029	69467455	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CYCSP43	ENSG00000231706	17888	LINC00269	ENSG00000215162	248105	None	None
L1FLnI_Xq13.1j	L1	L1	L1FLnI	chrX	69458034	69467455	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CYCSP43	ENSG00000231706	17888	LINC00269	ENSG00000215162	248110	None	None
L1FLnI_Xq13.1k	L1	L1	L1FLnI	chrX	69642952	69652711	-	noncoding	EDA	protein_coding	ANTISENSE	ENSG00000158813	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.1l	L1	L1	L1FLnI	chrX	69676331	69686348	-	coding	EDA	protein_coding	ANTISENSE	ENSG00000158813	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.1m	L1	L1	L1FLnI	chrX	69749521	69759680	-	coding	EDA	protein_coding	ANTISENSE	ENSG00000158813	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.1n	L1	L1	L1FLnI	chrX	69749680	69759680	-	coding	EDA	protein_coding	ANTISENSE	ENSG00000158813	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.1o	L1	L1	L1FLnI	chrX	69782788	69792818	-	coding	EDA	protein_coding	ANTISENSE	ENSG00000158813	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.1p	L1	L1	L1FLnI	chrX	69811055	69821921	+	noncoding	EDA	protein_coding	SENSE	ENSG00000158813	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.1q	L1	L1	L1FLnI	chrX	69822198	69832228	-	coding	EDA	protein_coding	ANTISENSE	ENSG00000158813	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.1r	L1	L1	L1FLnI	chrX	69922666	69931254	-	noncoding	EDA	protein_coding	ANTISENSE	ENSG00000158813	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.1s	L1	L1	L1FLnI	chrX	69937786	69948765	-	noncoding	EDA,CNOT7P1	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000158813,ENSG00000233229	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.1t	L1	L1	L1FLnI	chrX	70209904	70220035	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL581P	ENSG00000242657	1971	DGAT2L6	ENSG00000184210	4200	None	None
L1FLnI_Xq13.1u	L1	L1	L1FLnI	chrX	70362747	70372897	-	coding	KIF4A	protein_coding	ANTISENSE	ENSG00000090889	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.1v	L1	L1	L1FLnI	chrX	70514622	70524773	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TEX11	ENSG00000120498	4167	DLG3	ENSG00000082458	9132	None	None
L1FLnI_Xq13.1w	L1	L1	L1FLnI	chrX	70635404	70645439	+	coding	TEX11	protein_coding	ANTISENSE	ENSG00000120498	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.1x	L1	L1	L1FLnI	chrX	70710297	70720428	-	coding	TEX11	protein_coding	SENSE	ENSG00000120498	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.1y	L1	L1	L1FLnI	chrX	70724680	70734814	+	coding	TEX11	protein_coding	ANTISENSE	ENSG00000120498	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.1z	L1	L1	L1FLnI	chrX	70752126	70762235	+	noncoding	TEX11	protein_coding	ANTISENSE	ENSG00000120498	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.1aa	L1	L1	L1FLnI	chrX	70776835	70786981	+	noncoding	TEX11	protein_coding	ANTISENSE	ENSG00000120498	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.1ba	L1	L1	L1FLnI	chrX	70835000	70845121	+	coding	TEX11	protein_coding	ANTISENSE	ENSG00000120498	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.1ca	L1	L1	L1FLnI	chrX	70937460	70947611	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPS23P8	ENSG00000230629	15353	SLC7A3	ENSG00000165349	6335	None	None
L1FLnI_Xq13.1da	L1	L1	L1FLnI	chrX	71813213	71823335	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	BX276092.1	ENSG00000224617	23577	BX276092.3	ENSG00000229030	25440	None	None
L1FLnI_Xq13.1ea	L1	L1	L1FLnI	chrX	71826173	71836606	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX276092.1	ENSG00000224617	36537	BX276092.3	ENSG00000229030	12169	None	None
L1FLnI_Xq13.1fa	L1	L1	L1FLnI	chrX	71826174	71835217	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX276092.1	ENSG00000224617	36538	BX276092.3	ENSG00000229030	13558	None	None
L1FLnI_Xq13.1ga	L1	L1	L1FLnI	chrX	71837434	71847564	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX276092.3	ENSG00000229030	1211	BX276092.1	ENSG00000224617	47798	None	None
L1FLnI_Xq13.1ha	L1	L1	L1FLnI	chrX	71896573	71906711	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NHSL2	ENSG00000204131	4107	BX119927.1	ENSG00000283178	23278	None	None
L1FLnI_Xq13.1ia	L1	L1	L1FLnI	chrX	72437095	72447187	+	noncoding	AL133500.1,HDAC8	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000285547,ENSG00000147099	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.1ja	L1	L1	L1FLnI	chrX	72581949	72592073	+	coding	PHKA1	protein_coding	ANTISENSE	ENSG00000067177	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.1ka	L1	L1	L1FLnI	chrX	72824716	72834905	-	coding	DMRTC1B	protein_coding	ANTISENSE	ENSG00000184911	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.1la	L1	L1	L1FLnI	chrX	72885932	72896121	+	coding	DMRTC1	protein_coding	ANTISENSE	ENSG00000269502	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.1ma	L1	L1	L1FLnI	chrX	72977213	72987389	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DMRTC1	ENSG00000269502	33399	PABPC1L2B-AS1	ENSG00000226725	10999	None	None
L1FLnI_Xq13.1na	L1	L1	L1FLnI	chrX	72977213	72987373	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DMRTC1	ENSG00000269502	33399	PABPC1L2B-AS1	ENSG00000226725	11015	None	None
L1FLnI_Xq13.2a	L1	L1	L1FLnI	chrX	73031184	73041336	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PABPC1L2A	ENSG00000186288	35940	PABPC1L2B	ENSG00000184388	25471	None	None
L1FLnI_Xq13.2b	L1	L1	L1FLnI	chrX	73048562	73058999	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PABPC1L2B	ENSG00000184388	42849	PABPC1L2A	ENSG00000186288	18277	None	None
L1FLnI_Xq13.2c	L1	L1	L1FLnI	chrX	73056165	73066314	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PABPC1L2B	ENSG00000184388	50452	PABPC1L2A	ENSG00000186288	10962	None	None
L1FLnI_Xq13.2d	L1	L1	L1FLnI	chrX	73093438	73103583	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NAP1L6P	ENSG00000204118	22454	AL662864.1	ENSG00000231963	8803	None	None
L1FLnI_Xq13.2e	L1	L1	L1FLnI	chrX	73102644	73112670	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL662864.1	ENSG00000231963	18009	NAP1L6P	ENSG00000204118	13367	None	None
L1FLnI_Xq13.2f	L1	L1	L1FLnI	chrX	73113411	73123438	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL662864.1	ENSG00000231963	28776	NAP1L6P	ENSG00000204118	2599	None	None
L1FLnI_Xq13.2g	L1	L1	L1FLnI	chrX	73143671	73152989	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NAP1L2	ENSG00000186462	59310	NAP1L6P	ENSG00000204118	15591	None	None
L1FLnI_Xq13.2h	L1	L1	L1FLnI	chrX	73181402	73191225	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NAP1L6P	ENSG00000204118	53322	NAP1L2	ENSG00000186462	21074	None	None
L1FLnI_Xq13.2i	L1	L1	L1FLnI	chrX	73237475	73247497	+	noncoding	AC004074.1	processed_pseudogene	ANTISENSE	ENSG00000237014	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.2j	L1	L1	L1FLnI	chrX	73264945	73275128	+	noncoding	YWHAZP8	processed_pseudogene	SENSE	ENSG00000225664	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.2k	L1	L1	L1FLnI	chrX	73277879	73288002	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	YWHAZP8	ENSG00000225664	2364	RNU6-1044P	ENSG00000207486	109529	None	None
L1FLnI_Xq13.2l	L1	L1	L1FLnI	chrX	73299137	73309168	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1044P	ENSG00000207486	88363	YWHAZP8	ENSG00000225664	23622	None	None
L1FLnI_Xq13.2m	L1	L1	L1FLnI	chrX	73361499	73371216	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1044P	ENSG00000207486	26315	YWHAZP8	ENSG00000225664	85984	None	None
L1FLnI_Xq13.2n	L1	L1	L1FLnI	chrX	73371313	73381348	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	YWHAZP8	ENSG00000225664	95798	RNU6-1044P	ENSG00000207486	16183	None	None
L1FLnI_Xq13.2o	L1	L1	L1FLnI	chrX	73377494	73387514	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	YWHAZP8	ENSG00000225664	101979	RNU6-1044P	ENSG00000207486	10017	None	None
L1FLnI_Xq13.2p	L1	L1	L1FLnI	chrX	73397578	73407975	+	noncoding	RNU6-1044P	snRNA	ANTISENSE	ENSG00000207486	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.2q	L1	L1	L1FLnI	chrX	73419250	73427792	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1044P	ENSG00000207486	21613	CDX4	ENSG00000131264	19462	None	None
L1FLnI_Xq13.2r	L1	L1	L1FLnI	chrX	73428129	73438251	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CDX4	ENSG00000131264	9003	RNU6-1044P	ENSG00000207486	30492	None	None
L1FLnI_Xq13.2s	L1	L1	L1FLnI	chrX	73475693	73486137	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAP2K4P1	ENSG00000269904	38138	MORF4L1P6	ENSG00000233162	863	None	None
L1FLnI_Xq13.2t	L1	L1	L1FLnI	chrX	73491541	73501582	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAP2K4P1	ENSG00000269904	22693	MORF4L1P6	ENSG00000233162	16711	None	None
L1FLnI_Xq13.2u	L1	L1	L1FLnI	chrX	73491541	73501584	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAP2K4P1	ENSG00000269904	22691	MORF4L1P6	ENSG00000233162	16711	None	None
L1FLnI_Xq13.2v	L1	L1	L1FLnI	chrX	73507516	73517574	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MORF4L1P6	ENSG00000233162	32686	MAP2K4P1	ENSG00000269904	6701	None	None
L1FLnI_Xq13.2w	L1	L1	L1FLnI	chrX	73601747	73611450	-	noncoding	CHIC1	protein_coding	ANTISENSE	ENSG00000204116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.2x	L1	L1	L1FLnI	chrX	73643609	73653861	+	noncoding	CHIC1	protein_coding	SENSE	ENSG00000204116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.2y	L1	L1	L1FLnI	chrX	73644777	73653861	+	noncoding	CHIC1	protein_coding	SENSE	ENSG00000204116	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.2z	L1	L1	L1FLnI	chrX	73671274	73681387	-	coding	CHIC1	protein_coding	ANTISENSE	ENSG00000204116	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.2aa	L1	L1	L1FLnI	chrX	73693215	73701749	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CHIC1	ENSG00000204116	6113	SEPHS1P4	ENSG00000230146	67499	None	None
L1FLnI_Xq13.2ba	L1	L1	L1FLnI	chrX	73698457	73708045	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CHIC1	ENSG00000204116	11355	SEPHS1P4	ENSG00000230146	61203	None	None
L1FLnI_Xq13.2ca	L1	L1	L1FLnI	chrX	73744941	73753764	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SEPHS1P4	ENSG00000230146	15484	CHIC1	ENSG00000204116	57839	None	None
L1FLnI_Xq13.2da	L1	L1	L1FLnI	chrX	73768004	73777090	+	coding	SEPHS1P4	processed_pseudogene	SENSE	ENSG00000230146	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.2ea	L1	L1	L1FLnI	chrX	74015199	74023737	+	noncoding	FTX,JPX	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000230590,ENSG00000225470	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chrX:74015419-74015550,chrX:74016240-74016547	None
L1FLnI_Xq13.2fa	L1	L1	L1FLnI	chrX	74033445	74043575	-	coding	FTX,JPX	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000230590,ENSG00000225470	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.2ga	L1	L1	L1FLnI	chrX	74040112	74050479	-	noncoding	FTX,JPX	lncRNA,lncRNA	SENSE,ANTISENSE	ENSG00000230590,ENSG00000225470	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.2ha	L1	L1	L1FLnI	chrX	74071491	74082010	-	noncoding	FTX	lncRNA	SENSE	ENSG00000230590	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.2ia	L1	L1	L1FLnI	chrX	74071491	74081602	-	noncoding	FTX	lncRNA	SENSE	ENSG00000230590	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.2ja	L1	L1	L1FLnI	chrX	74142364	74152110	+	noncoding	FTX	lncRNA	ANTISENSE	ENSG00000230590	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.2ka	L1	L1	L1FLnI	chrX	74473980	74484131	-	coding	SLC16A2	protein_coding	ANTISENSE	ENSG00000147100	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.2la	L1	L1	L1FLnI	chrX	74632786	74643098	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RLIM	ENSG00000131263	18162	RNU6-330P	ENSG00000199885	36955	None	None
L1FLnI_Xq13.2ma	L1	L1	L1FLnI	chrX	74686839	74696991	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NEXMIF	ENSG00000050030	35865	RNU6-330P	ENSG00000199885	6680	None	None
L1FLnI_Xq13.2na	L1	L1	L1FLnI	chrX	74692220	74702370	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-330P	ENSG00000199885	12061	NEXMIF	ENSG00000050030	30486	None	None
L1FLnI_Xq13.3a	L1	L1	L1FLnI	chrX	74709208	74718583	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-330P	ENSG00000199885	29049	NEXMIF	ENSG00000050030	14273	None	None
L1FLnI_Xq13.3b	L1	L1	L1FLnI	chrX	74788478	74798500	-	coding	NEXMIF	protein_coding	SENSE	ENSG00000050030	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.3c	L1	L1	L1FLnI	chrX	74788484	74798500	-	coding	NEXMIF	protein_coding	SENSE	ENSG00000050030	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.3d	L1	L1	L1FLnI	chrX	74872495	74882515	-	coding	NEXMIF	protein_coding	SENSE	ENSG00000050030	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.3e	L1	L1	L1FLnI	chrX	74878663	74888801	+	coding	NEXMIF	protein_coding	ANTISENSE	ENSG00000050030	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.3f	L1	L1	L1FLnI	chrX	74949905	74958504	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NEXMIF	ENSG00000050030	24420	ABCB7	ENSG00000131269	92544	None	None
L1FLnI_Xq13.3g	L1	L1	L1FLnI	chrX	74993535	75003668	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ABCB7	ENSG00000131269	47380	NEXMIF	ENSG00000050030	68050	None	None
L1FLnI_Xq13.3h	L1	L1	L1FLnI	chrX	75030750	75040587	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ABCB7	ENSG00000131269	10461	NEXMIF	ENSG00000050030	105265	None	None
L1FLnI_Xq13.3i	L1	L1	L1FLnI	chrX	75084643	75094266	+	noncoding	ABCB7	protein_coding	ANTISENSE	ENSG00000131269	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.3j	L1	L1	L1FLnI	chrX	75084643	75094256	+	noncoding	ABCB7	protein_coding	ANTISENSE	ENSG00000131269	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.3k	L1	L1	L1FLnI	chrX	75128115	75138540	+	noncoding	ABCB7	protein_coding	ANTISENSE	ENSG00000131269	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.3l	L1	L1	L1FLnI	chrX	75182504	75192543	-	noncoding	UPRT	protein_coding	ANTISENSE	ENSG00000094841	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.3m	L1	L1	L1FLnI	chrX	75182524	75192543	-	noncoding	UPRT	protein_coding	ANTISENSE	ENSG00000094841	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.3n	L1	L1	L1FLnI	chrX	75228439	75238461	+	noncoding	UPRT	protein_coding	SENSE	ENSG00000094841	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.3o	L1	L1	L1FLnI	chrX	75243639	75253701	+	coding	UPRT	protein_coding	SENSE	ENSG00000094841	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.3p	L1	L1	L1FLnI	chrX	75279544	75289201	-	noncoding	UPRT	protein_coding	ANTISENSE	ENSG00000094841	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.3q	L1	L1	L1FLnI	chrX	75313023	75323157	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL137013.1	ENSG00000232186	3615	UPRT	ENSG00000094841	8138	None	None
L1FLnI_Xq13.3r	L1	L1	L1FLnI	chrX	75394102	75405893	+	noncoding	ZDHHC15	protein_coding	ANTISENSE	ENSG00000102383	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.3s	L1	L1	L1FLnI	chrX	75554661	75564678	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	BRAFP1	ENSG00000224775	17998	PCNPP4	ENSG00000237089	15959	None	None
L1FLnI_Xq13.3t	L1	L1	L1FLnI	chrX	75560772	75570803	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	BRAFP1	ENSG00000224775	11873	PCNPP4	ENSG00000237089	22070	None	None
L1FLnI_Xq13.3u	L1	L1	L1FLnI	chrX	75583030	75593012	+	coding	BRAFP1	unprocessed_pseudogene	SENSE	ENSG00000224775	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.3v	L1	L1	L1FLnI	chrX	75596010	75606123	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TTC3P1	ENSG00000215105	134708	BRAFP1	ENSG00000224775	10504	None	None
L1FLnI_Xq13.3w	L1	L1	L1FLnI	chrX	75612901	75623029	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	BRAFP1	ENSG00000224775	27395	TTC3P1	ENSG00000215105	117802	None	None
L1FLnI_Xq13.3x	L1	L1	L1FLnI	chrX	75680028	75690033	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TTC3P1	ENSG00000215105	50798	BRAFP1	ENSG00000224775	94522	None	None
L1FLnI_Xq13.3y	L1	L1	L1FLnI	chrX	75719534	75728501	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTC3P1	ENSG00000215105	12330	BRAFP1	ENSG00000224775	134028	None	None
L1FLnI_Xq13.3z	L1	L1	L1FLnI	chrX	75729872	75739222	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTC3P1	ENSG00000215105	1609	BRAFP1	ENSG00000224775	144366	chrX:75731961-75732316	None
L1FLnI_Xq13.3aa	L1	L1	L1FLnI	chrX	75792955	75803407	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SAR1AP4	ENSG00000233063	81139	MAGEE2	ENSG00000186675	7701	None	None
L1FLnI_Xq13.3ba	L1	L1	L1FLnI	chrX	75804288	75814437	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SAR1AP4	ENSG00000233063	70109	MAGEE2	ENSG00000186675	19034	None	None
L1FLnI_Xq13.3ca	L1	L1	L1FLnI	chrX	75804300	75814437	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SAR1AP4	ENSG00000233063	70109	MAGEE2	ENSG00000186675	19046	None	None
L1FLnI_Xq13.3da	L1	L1	L1FLnI	chrX	75810477	75820824	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAGEE2	ENSG00000186675	25223	SAR1AP4	ENSG00000233063	63722	None	None
L1FLnI_Xq13.3ea	L1	L1	L1FLnI	chrX	75832779	75843203	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SAR1AP4	ENSG00000233063	41343	MAGEE2	ENSG00000186675	47525	None	None
L1FLnI_Xq13.3fa	L1	L1	L1FLnI	chrX	75875174	75885454	-	noncoding	SAR1AP4	processed_pseudogene	ANTISENSE	ENSG00000233063	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.3ga	L1	L1	L1FLnI	chrX	75950939	75961689	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC233982.1	ENSG00000232332	68206	AL451105.2	ENSG00000226854	46081	None	None
L1FLnI_Xq13.3ha	L1	L1	L1FLnI	chrX	75952223	75961689	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC233982.1	ENSG00000232332	68206	AL451105.2	ENSG00000226854	47365	None	None
L1FLnI_Xq13.3ia	L1	L1	L1FLnI	chrX	75976512	75985877	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC233982.1	ENSG00000232332	44018	AL451105.2	ENSG00000226854	71654	None	None
L1FLnI_Xq13.3ja	L1	L1	L1FLnI	chrX	75992477	76001762	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC233982.1	ENSG00000232332	28133	AL451105.2	ENSG00000226854	87619	None	None
L1FLnI_Xq13.3ka	L1	L1	L1FLnI	chrX	76010475	76020297	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL451105.2	ENSG00000226854	105617	AC233982.1	ENSG00000232332	9598	None	None
L1FLnI_Xq13.3la	L1	L1	L1FLnI	chrX	76033833	76043568	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PBDC1	ENSG00000102390	129472	AC233982.1	ENSG00000232332	3503	None	None
L1FLnI_Xq13.3ma	L1	L1	L1FLnI	chrX	76046293	76056439	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PBDC1	ENSG00000102390	116601	AC233982.1	ENSG00000232332	15963	None	None
L1FLnI_Xq13.3na	L1	L1	L1FLnI	chrX	76065305	76075337	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC233982.1	ENSG00000232332	34975	PBDC1	ENSG00000102390	97703	None	None
L1FLnI_Xq13.3oa	L1	L1	L1FLnI	chrX	76155526	76165991	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC233982.1	ENSG00000232332	125196	PBDC1	ENSG00000102390	7049	None	None
L1FLnI_Xq13.3pa	L1	L1	L1FLnI	chrX	76178331	76187225	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC233981.1	ENSG00000237252	35412	PBDC1	ENSG00000102390	17	None	None
L1FLnI_Xq13.3qa	L1	L1	L1FLnI	chrX	76197116	76206714	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC233981.1	ENSG00000237252	15923	PBDC1	ENSG00000102390	18802	None	None
L1FLnI_Xq13.3ra	L1	L1	L1FLnI	chrX	76197502	76206714	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC233981.1	ENSG00000237252	15923	PBDC1	ENSG00000102390	19188	None	None
L1FLnI_Xq13.3sa	L1	L1	L1FLnI	chrX	76229856	76239654	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC233981.1	ENSG00000237252	6759	RNU6-867P	ENSG00000201826	5314	None	None
L1FLnI_Xq13.3ta	L1	L1	L1FLnI	chrX	76254872	76265136	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LDHBP2	ENSG00000213684	69705	AC233981.2	ENSG00000274398	3076	None	None
L1FLnI_Xq13.3ua	L1	L1	L1FLnI	chrX	76261287	76270898	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LDHBP2	ENSG00000213684	63943	AC233981.2	ENSG00000274398	9491	None	None
L1FLnI_Xq13.3va	L1	L1	L1FLnI	chrX	76263907	76273929	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC233981.2	ENSG00000274398	12111	LDHBP2	ENSG00000213684	60912	None	None
L1FLnI_Xq13.3wa	L1	L1	L1FLnI	chrX	76284499	76294515	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC233981.2	ENSG00000274398	32703	LDHBP2	ENSG00000213684	40326	None	None
L1ORF2_Xq13.3	L1	L1	L1ORF2	chrX	76321773	76329821	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LDHBP2	ENSG00000213684	5020	AC233981.2	ENSG00000274398	69977	None	None
L1FLnI_Xq13.3xa	L1	L1	L1FLnI	chrX	76373046	76382080	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MAGEE1	ENSG00000198934	45630	LDHBP2	ENSG00000213684	37201	None	None
L1FLnI_Xq13.3ya	L1	L1	L1FLnI	chrX	76375918	76386328	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LDHBP2	ENSG00000213684	40073	MAGEE1	ENSG00000198934	41382	None	None
L1FLnI_Xq13.3za	L1	L1	L1FLnI	chrX	76411332	76420681	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LDHBP2	ENSG00000213684	75487	MAGEE1	ENSG00000198934	7029	None	None
L1FLnI_Xq13.3ab	L1	L1	L1FLnI	chrX	76461352	76471308	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP508	ENSG00000223259	183701	MAGEE1	ENSG00000198934	30010	None	None
L1FLnI_Xq13.3bb	L1	L1	L1FLnI	chrX	76461707	76471308	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP508	ENSG00000223259	183701	MAGEE1	ENSG00000198934	30365	None	None
L1FLnI_Xq13.3cb	L1	L1	L1FLnI	chrX	76467430	76477869	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAGEE1	ENSG00000198934	36088	RNA5SP508	ENSG00000223259	177140	None	None
L1FLnI_Xq13.3db	L1	L1	L1FLnI	chrX	76488863	76499285	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAGEE1	ENSG00000198934	57521	RNA5SP508	ENSG00000223259	155724	None	None
L1FLnI_Xq13.3eb	L1	L1	L1FLnI	chrX	76521324	76531500	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP508	ENSG00000223259	123509	MAGEE1	ENSG00000198934	89982	None	None
L1FLnI_Xq13.3fb	L1	L1	L1FLnI	chrX	76542086	76551268	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP508	ENSG00000223259	103741	MAGEE1	ENSG00000198934	110744	None	None
L1FLnI_Xq13.3gb	L1	L1	L1FLnI	chrX	76556053	76566202	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MAGEE1	ENSG00000198934	124711	RNA5SP508	ENSG00000223259	88807	None	None
L1FLnI_Xq13.3hb	L1	L1	L1FLnI	chrX	76564548	76574710	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAGEE1	ENSG00000198934	133206	RNA5SP508	ENSG00000223259	80299	None	None
L1FLnI_Xq13.3ib	L1	L1	L1FLnI	chrX	76577330	76587482	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP508	ENSG00000223259	67527	MAGEE1	ENSG00000198934	145988	None	None
L1FLnI_Xq13.3jb	L1	L1	L1FLnI	chrX	76585056	76595393	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP508	ENSG00000223259	59616	MAGEE1	ENSG00000198934	153714	None	None
L1FLnI_Xq13.3kb	L1	L1	L1FLnI	chrX	76596585	76606433	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP508	ENSG00000223259	48576	MAGEE1	ENSG00000198934	165243	None	None
L1FLnI_Xq13.3lb	L1	L1	L1FLnI	chrX	76613104	76623733	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MAGEE1	ENSG00000198934	181762	RNA5SP508	ENSG00000223259	31276	None	None
L1FLnI_Xq13.3mb	L1	L1	L1FLnI	chrX	76632772	76642120	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP508	ENSG00000223259	12889	MAGEE1	ENSG00000198934	201430	None	None
L1FLnI_Xq13.3nb	L1	L1	L1FLnI	chrX	76659779	76669902	-	coding	AC233296.1	lncRNA	SENSE	ENSG00000280870	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.3ob	L1	L1	L1FLnI	chrX	76719533	76729545	-	coding	AC233296.1	lncRNA	SENSE	ENSG00000280870	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq13.3pb	L1	L1	L1FLnI	chrX	76738315	76747370	+	noncoding	AC233296.1	lncRNA	ANTISENSE	ENSG00000280870	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1a	L1	L1	L1FLnI	chrX	76878710	76888856	+	noncoding	AC233296.1	lncRNA	ANTISENSE	ENSG00000280870	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1b	L1	L1	L1FLnI	chrX	76920868	76931011	+	coding	AC233296.1	lncRNA	ANTISENSE	ENSG00000280870	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1c	L1	L1	L1FLnI	chrX	76946915	76956802	+	coding	AC233296.1	lncRNA	ANTISENSE	ENSG00000280870	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1d	L1	L1	L1FLnI	chrX	76975113	76985265	+	coding	AC233296.1	lncRNA	ANTISENSE	ENSG00000280870	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1e	L1	L1	L1FLnI	chrX	76975113	76985281	+	coding	AC233296.1	lncRNA	ANTISENSE	ENSG00000280870	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1f	L1	L1	L1FLnI	chrX	77042728	77052752	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC233296.1	ENSG00000280870	28196	RNA5SP509	ENSG00000201447	13957	None	chrX:77046613-77046616
L1FLnI_Xq21.1g	L1	L1	L1FLnI	chrX	77070753	77081106	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPRYD7P1	ENSG00000234404	293106	RNA5SP509	ENSG00000201447	3926	None	None
L1FLnI_Xq21.1h	L1	L1	L1FLnI	chrX	77070753	77079812	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPRYD7P1	ENSG00000234404	294400	RNA5SP509	ENSG00000201447	3926	None	None
L1FLnI_Xq21.1i	L1	L1	L1FLnI	chrX	77085776	77095914	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP509	ENSG00000201447	18949	SPRYD7P1	ENSG00000234404	278298	None	None
L1FLnI_Xq21.1j	L1	L1	L1FLnI	chrX	77131482	77141633	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SPRYD7P1	ENSG00000234404	232579	RNA5SP509	ENSG00000201447	64655	None	None
L1FLnI_Xq21.1k	L1	L1	L1FLnI	chrX	77180969	77191107	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP509	ENSG00000201447	114142	SPRYD7P1	ENSG00000234404	183105	None	None
L1FLnI_Xq21.1l	L1	L1	L1FLnI	chrX	77190989	77200923	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPRYD7P1	ENSG00000234404	173289	RNA5SP509	ENSG00000201447	124162	None	None
L1FLnI_Xq21.1m	L1	L1	L1FLnI	chrX	77240769	77250795	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP509	ENSG00000201447	173942	SPRYD7P1	ENSG00000234404	123417	None	None
L1FLnI_Xq21.1n	L1	L1	L1FLnI	chrX	77264656	77274622	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP509	ENSG00000201447	197829	SPRYD7P1	ENSG00000234404	99590	None	None
L1FLnI_Xq21.1o	L1	L1	L1FLnI	chrX	77279037	77289427	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP509	ENSG00000201447	212210	SPRYD7P1	ENSG00000234404	84785	None	None
L1FLnI_Xq21.1p	L1	L1	L1FLnI	chrX	77301544	77311082	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP509	ENSG00000201447	234717	SPRYD7P1	ENSG00000234404	63130	None	None
L1FLnI_Xq21.1q	L1	L1	L1FLnI	chrX	77315404	77325535	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP509	ENSG00000201447	248577	SPRYD7P1	ENSG00000234404	48677	None	None
L1FLnI_Xq21.1r	L1	L1	L1FLnI	chrX	77328012	77337012	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPRYD7P1	ENSG00000234404	37200	RNA5SP509	ENSG00000201447	261185	None	None
L1FLnI_Xq21.1s	L1	L1	L1FLnI	chrX	77330460	77340598	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP509	ENSG00000201447	263633	SPRYD7P1	ENSG00000234404	33614	None	None
L1FLnI_Xq21.1t	L1	L1	L1FLnI	chrX	77343675	77354158	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP509	ENSG00000201447	276848	SPRYD7P1	ENSG00000234404	20054	None	None
L1FLnI_Xq21.1u	L1	L1	L1FLnI	chrX	77371022	77381469	+	noncoding	SPRYD7P1	processed_pseudogene	SENSE	ENSG00000234404	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1v	L1	L1	L1FLnI	chrX	77380474	77389388	+	noncoding	SPRYD7P1	processed_pseudogene	SENSE	ENSG00000234404	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1w	L1	L1	L1FLnI	chrX	77380538	77389388	+	noncoding	SPRYD7P1	processed_pseudogene	SENSE	ENSG00000234404	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1x	L1	L1	L1FLnI	chrX	77386415	77396830	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPRYD7P1	ENSG00000234404	5096	FGF16	ENSG00000196468	50559	None	None
L1FLnI_Xq21.1y	L1	L1	L1FLnI	chrX	77386415	77396845	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPRYD7P1	ENSG00000234404	5096	FGF16	ENSG00000196468	50544	None	None
L1FLnI_Xq21.1z	L1	L1	L1FLnI	chrX	77467143	77477270	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FGF16	ENSG00000196468	9865	ATRX	ENSG00000085224	27608	None	None
L1FLnI_Xq21.1aa	L1	L1	L1FLnI	chrX	77750020	77760289	-	coding	ATRX	protein_coding	SENSE	ENSG00000085224	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1ba	L1	L1	L1FLnI	chrX	78075880	78085030	-	coding	PGK1	protein_coding	ANTISENSE	ENSG00000102144	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1ca	L1	L1	L1FLnI	chrX	78151947	78161529	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	FNDC3CP	ENSG00000223592	4167	TAF9B	ENSG00000187325	12297	None	None
L1FLnI_Xq21.1da	L1	L1	L1FLnI	chrX	78185351	78195500	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FNDC3CP	ENSG00000223592	12929	CYSLTR1	ENSG00000173198	75968	None	None
L1FLnI_Xq21.1ea	L1	L1	L1FLnI	chrX	78236546	78246557	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FNDC3CP	ENSG00000223592	64124	CYSLTR1	ENSG00000173198	24911	None	None
L1FLnI_Xq21.1fa	L1	L1	L1FLnI	chrX	78236546	78245957	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FNDC3CP	ENSG00000223592	64124	CYSLTR1	ENSG00000173198	25511	None	None
L1FLnI_Xq21.1ga	L1	L1	L1FLnI	chrX	78288472	78298619	-	noncoding	CYSLTR1	protein_coding	SENSE	ENSG00000173198	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1ha	L1	L1	L1FLnI	chrX	78294623	78304133	-	noncoding	CYSLTR1	protein_coding	SENSE	ENSG00000173198	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1ia	L1	L1	L1FLnI	chrX	78335260	78344456	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN1P34	ENSG00000224755	175137	CYSLTR1	ENSG00000173198	7569	None	None
L1FLnI_Xq21.1ja	L1	L1	L1FLnI	chrX	78367895	78376685	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN1P34	ENSG00000224755	142908	CYSLTR1	ENSG00000173198	40204	None	None
L1FLnI_Xq21.1ka	L1	L1	L1FLnI	chrX	78406364	78415279	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CYSLTR1	ENSG00000173198	78673	HMGN1P34	ENSG00000224755	104314	None	None
L1FLnI_Xq21.1la	L1	L1	L1FLnI	chrX	78465727	78475891	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HMGN1P34	ENSG00000224755	43702	CYSLTR1	ENSG00000173198	138036	None	None
L1FLnI_Xq21.1ma	L1	L1	L1FLnI	chrX	78498765	78507419	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYSLTR1	ENSG00000173198	171074	HMGN1P34	ENSG00000224755	12174	None	None
L1FLnI_Xq21.1na	L1	L1	L1FLnI	chrX	78503465	78513973	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYSLTR1	ENSG00000173198	175774	HMGN1P34	ENSG00000224755	5620	None	None
L1FLnI_Xq21.1oa	L1	L1	L1FLnI	chrX	78503465	78512379	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYSLTR1	ENSG00000173198	175774	HMGN1P34	ENSG00000224755	7214	None	None
L1FLnI_Xq21.1pa	L1	L1	L1FLnI	chrX	78539850	78549468	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2V1P7	ENSG00000235061	4944	HMGN1P34	ENSG00000224755	19664	None	None
L1FLnI_Xq21.1qa	L1	L1	L1FLnI	chrX	78557151	78567710	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RTL3	ENSG00000179300	88358	UBE2V1P7	ENSG00000235061	2400	None	None
L1FLnI_Xq21.1ra	L1	L1	L1FLnI	chrX	78585938	78595737	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RTL3	ENSG00000179300	60331	UBE2V1P7	ENSG00000235061	31187	None	None
L1FLnI_Xq21.1sa	L1	L1	L1FLnI	chrX	78612706	78624164	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RTL3	ENSG00000179300	31904	UBE2V1P7	ENSG00000235061	57955	None	None
L1FLnI_Xq21.1ta	L1	L1	L1FLnI	chrX	78615244	78624164	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RTL3	ENSG00000179300	31904	UBE2V1P7	ENSG00000235061	60493	None	None
L1FLnI_Xq21.1ua	L1	L1	L1FLnI	chrX	78639612	78649427	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2V1P7	ENSG00000235061	84861	RTL3	ENSG00000179300	6641	None	None
L1FLnI_Xq21.1va	L1	L1	L1FLnI	chrX	78729859	78740761	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LPAR4	ENSG00000147145	6948	PPATP2	ENSG00000271433	29968	None	None
L1FLnI_Xq21.1wa	L1	L1	L1FLnI	chrX	78871502	78881549	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P54	ENSG00000227645	107603	MIR4328	ENSG00000283622	19645	None	None
L1FLnI_Xq21.1xa	L1	L1	L1FLnI	chrX	78871502	78880550	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P54	ENSG00000227645	107603	MIR4328	ENSG00000283622	20644	None	None
L1FLnI_Xq21.1ya	L1	L1	L1FLnI	chrX	78892331	78901882	-	noncoding	MIR4328	miRNA	SENSE	ENSG00000283622	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1za	L1	L1	L1FLnI	chrX	78973460	78982135	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	P2RY10BP	ENSG00000232168	102801	P2RY10	ENSG00000078589	9733	None	None
L1FLnI_Xq21.1ab	L1	L1	L1FLnI	chrX	79006925	79017378	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	P2RY10BP	ENSG00000232168	67558	P2RY10	ENSG00000078589	43198	None	None
L1FLnI_Xq21.1bb	L1	L1	L1FLnI	chrX	79007788	79017378	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	P2RY10BP	ENSG00000232168	67558	P2RY10	ENSG00000078589	44061	None	None
L1FLnI_Xq21.1cb	L1	L1	L1FLnI	chrX	79026096	79036226	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	P2RY10BP	ENSG00000232168	48710	P2RY10	ENSG00000078589	62369	None	None
L1FLnI_Xq21.1db	L1	L1	L1FLnI	chrX	79193067	79201931	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CTHRC1P1	ENSG00000271005	15399	KIF4CP	ENSG00000225025	121515	None	None
L1FLnI_Xq21.1eb	L1	L1	L1FLnI	chrX	79205190	79215333	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KIF4CP	ENSG00000225025	108113	CTHRC1P1	ENSG00000271005	27522	None	None
L1FLnI_Xq21.1fb	L1	L1	L1FLnI	chrX	79205210	79215333	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KIF4CP	ENSG00000225025	108113	CTHRC1P1	ENSG00000271005	27542	None	None
L1FLnI_Xq21.1gb	L1	L1	L1FLnI	chrX	79225340	79236579	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KIF4CP	ENSG00000225025	86867	CTHRC1P1	ENSG00000271005	47672	None	None
L1FLnI_Xq21.1hb	L1	L1	L1FLnI	chrX	79376207	79386745	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL009028.1	ENSG00000270268	6042	TBX22	ENSG00000122145	628008	None	None
L1FLnI_Xq21.1ib	L1	L1	L1FLnI	chrX	79459169	79468161	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL009028.1	ENSG00000270268	89004	TBX22	ENSG00000122145	546592	None	None
L1FLnI_Xq21.1jb	L1	L1	L1FLnI	chrX	79459178	79468161	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL009028.1	ENSG00000270268	89013	TBX22	ENSG00000122145	546592	None	None
L1FLnI_Xq21.1kb	L1	L1	L1FLnI	chrX	79478206	79487891	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL009028.1	ENSG00000270268	108041	TBX22	ENSG00000122145	526862	None	None
L1FLnI_Xq21.1lb	L1	L1	L1FLnI	chrX	79490353	79499168	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL009028.1	ENSG00000270268	120188	TBX22	ENSG00000122145	515585	None	None
L1FLnI_Xq21.1mb	L1	L1	L1FLnI	chrX	79490353	79498883	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL009028.1	ENSG00000270268	120188	TBX22	ENSG00000122145	515870	None	None
L1FLnI_Xq21.1nb	L1	L1	L1FLnI	chrX	79634155	79643631	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TBX22	ENSG00000122145	371122	AL009028.1	ENSG00000270268	263990	None	None
L1FLnI_Xq21.1ob	L1	L1	L1FLnI	chrX	79650875	79660088	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TBX22	ENSG00000122145	354665	AL009028.1	ENSG00000270268	280710	None	None
L1FLnI_Xq21.1pb	L1	L1	L1FLnI	chrX	79765100	79775125	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TBX22	ENSG00000122145	239628	AL009028.1	ENSG00000270268	394935	None	None
L1FLnI_Xq21.1qb	L1	L1	L1FLnI	chrX	79765107	79775125	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TBX22	ENSG00000122145	239628	AL009028.1	ENSG00000270268	394942	None	None
L1FLnI_Xq21.1rb	L1	L1	L1FLnI	chrX	79923301	79933329	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL009028.1	ENSG00000270268	553136	TBX22	ENSG00000122145	81424	None	None
L1FLnI_Xq21.1sb	L1	L1	L1FLnI	chrX	80049030	80059453	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CHMP1B2P	ENSG00000278530	169036	TBX22	ENSG00000122145	17256	None	None
L1FLnI_Xq21.1tb	L1	L1	L1FLnI	chrX	80060060	80070195	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CHMP1B2P	ENSG00000278530	158294	TBX22	ENSG00000122145	28286	None	None
L1FLnI_Xq21.1ub	L1	L1	L1FLnI	chrX	80150804	80160958	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CHMP1B2P	ENSG00000278530	67531	TBX22	ENSG00000122145	119030	None	None
L1FLnI_Xq21.1vb	L1	L1	L1FLnI	chrX	80269928	80280379	+	noncoding	CHMP1B2P	transcribed_unitary_pseudogene	ANTISENSE	ENSG00000278530	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1wb	L1	L1	L1FLnI	chrX	80299724	80310742	-	noncoding	CHMP1B2P	transcribed_unitary_pseudogene	SENSE	ENSG00000278530	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1xb	L1	L1	L1FLnI	chrX	80346162	80356638	-	noncoding	TENT5D	protein_coding	ANTISENSE	ENSG00000174016	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1yb	L1	L1	L1FLnI	chrX	80376750	80386631	-	noncoding	TENT5D	protein_coding	ANTISENSE	ENSG00000174016	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1zb	L1	L1	L1FLnI	chrX	80401743	80411757	+	coding	TENT5D	protein_coding	SENSE	ENSG00000174016	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1ac	L1	L1	L1FLnI	chrX	80458686	80469212	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TENT5D	ENSG00000174016	13375	HNRNPH3P1	ENSG00000230247	59825	None	None
L1FLnI_Xq21.1bc	L1	L1	L1FLnI	chrX	80539091	80548621	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPH3P1	ENSG00000230247	9064	AL512504.2	ENSG00000228051	11525	None	None
L1FLnI_Xq21.1cc	L1	L1	L1FLnI	chrX	80580413	80590835	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	BRWD3	ENSG00000165288	78668	HK2P1	ENSG00000228612	5806	None	None
L1FLnI_Xq21.1dc	L1	L1	L1FLnI	chrX	80630190	80639786	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	BRWD3	ENSG00000165288	29717	HK2P1	ENSG00000228612	55583	None	None
L1FLnI_Xq21.1ec	L1	L1	L1FLnI	chrX	80647097	80657222	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HK2P1	ENSG00000228612	72490	BRWD3	ENSG00000165288	12281	None	None
L1FLnI_Xq21.1fc	L1	L1	L1FLnI	chrX	80763139	80772065	+	coding	BRWD3	protein_coding	ANTISENSE	ENSG00000165288	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1gc	L1	L1	L1FLnI	chrX	80821708	80832130	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590031.1	ENSG00000239008	24946	BRWD3	ENSG00000165288	11831	None	None
L1FLnI_Xq21.1hc	L1	L1	L1FLnI	chrX	80887113	80897248	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-493P	ENSG00000212623	3509	AL590031.1	ENSG00000239008	29911	None	None
L1FLnI_Xq21.1ic	L1	L1	L1FLnI	chrX	80904836	80913370	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-493P	ENSG00000212623	3972	VDAC1P1	ENSG00000073905	16130	None	None
L1FLnI_Xq21.1jc	L1	L1	L1FLnI	chrX	80933071	80943193	+	coding	RNU6-995P	snRNA	SENSE	ENSG00000212546	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1kc	L1	L1	L1FLnI	chrX	80976371	80986306	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL391294.1	ENSG00000284618	13844	RNU6-995P	ENSG00000212546	39831	None	None
L1FLnI_Xq21.1lc	L1	L1	L1FLnI	chrX	81023336	81033486	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL391294.1	ENSG00000284618	19119	HMGN5	ENSG00000198157	80213	None	None
L1FLnI_Xq21.1mc	L1	L1	L1FLnI	chrX	81080145	81090558	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL391294.1	ENSG00000284618	75928	HMGN5	ENSG00000198157	23141	None	None
L1FLnI_Xq21.1nc	L1	L1	L1FLnI	chrX	81139880	81150129	+	noncoding	HMGN5	protein_coding	ANTISENSE	ENSG00000198157	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1oc	L1	L1	L1FLnI	chrX	81264710	81274882	-	coding	SH3BGRL	protein_coding	ANTISENSE	ENSG00000131171	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1pc	L1	L1	L1FLnI	chrX	81275835	81284831	+	noncoding	SH3BGRL	protein_coding	SENSE	ENSG00000131171	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrX:81278325-81278338
L1FLnI_Xq21.1qc	L1	L1	L1FLnI	chrX	81302271	81312484	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359885.1	ENSG00000231875	50784	SH3BGRL	ENSG00000131171	3724	None	None
L1FLnI_Xq21.1rc	L1	L1	L1FLnI	chrX	81310270	81320439	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359885.1	ENSG00000231875	42829	SH3BGRL	ENSG00000131171	11723	None	None
L1FLnI_Xq21.1sc	L1	L1	L1FLnI	chrX	81332487	81342202	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359885.1	ENSG00000231875	21066	SH3BGRL	ENSG00000131171	33940	None	None
L1FLnI_Xq21.1tc	L1	L1	L1FLnI	chrX	81333213	81342202	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359885.1	ENSG00000231875	21066	SH3BGRL	ENSG00000131171	34666	None	None
L1FLnI_Xq21.1uc	L1	L1	L1FLnI	chrX	81339394	81349406	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359885.1	ENSG00000231875	13862	SH3BGRL	ENSG00000131171	40847	None	None
L1FLnI_Xq21.1vc	L1	L1	L1FLnI	chrX	81446437	81455280	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL445213.1	ENSG00000224523	19161	AL445213.2	ENSG00000288059	20252	None	None
L1FLnI_Xq21.1wc	L1	L1	L1FLnI	chrX	81468992	81479088	-	noncoding	AL445213.2	lncRNA	ANTISENSE	ENSG00000288059	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1xc	L1	L1	L1FLnI	chrX	81574980	81584223	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL445213.2	ENSG00000288059	76897	AL691517.1	ENSG00000233446	15849	None	None
L1FLnI_Xq21.1yc	L1	L1	L1FLnI	chrX	81680442	81689335	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL691517.1	ENSG00000233446	79136	RNU6-974P	ENSG00000206826	311885	None	chrX:81682030-81682052,chrX:81682152-81682159,chrX:81682456-81682472,chrX:81682475-81682495,chrX:81682437-81682452,chrX:81682520-81682528
L1FLnI_Xq21.1zc	L1	L1	L1FLnI	chrX	81739678	81749809	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL691517.1	ENSG00000233446	138372	RNU6-974P	ENSG00000206826	251411	None	None
L1FLnI_Xq21.1ad	L1	L1	L1FLnI	chrX	81751136	81760518	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL691517.1	ENSG00000233446	149830	RNU6-974P	ENSG00000206826	240702	None	None
L1FLnI_Xq21.1bd	L1	L1	L1FLnI	chrX	81788624	81797719	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL691517.1	ENSG00000233446	187318	RNU6-974P	ENSG00000206826	203501	None	None
L1FLnI_Xq21.1cd	L1	L1	L1FLnI	chrX	81814159	81822695	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-974P	ENSG00000206826	178525	AL691517.1	ENSG00000233446	212853	None	None
L1ORF2_Xq21.1	L1	L1	L1ORF2	chrX	81840153	81848198	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL691517.1	ENSG00000233446	238847	RNU6-974P	ENSG00000206826	153022	None	None
L1FLnI_Xq21.1dd	L1	L1	L1FLnI	chrX	81881354	81891235	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-974P	ENSG00000206826	109985	AL691517.1	ENSG00000233446	280048	None	None
L1FLnI_Xq21.1ed	L1	L1	L1FLnI	chrX	81936839	81946929	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL691517.1	ENSG00000233446	335533	RNU6-974P	ENSG00000206826	54291	None	None
L1FLnI_Xq21.1fd	L1	L1	L1FLnI	chrX	81977955	81988240	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL691517.1	ENSG00000233446	376649	RNU6-974P	ENSG00000206826	12980	None	None
L1FLnI_Xq21.1gd	L1	L1	L1FLnI	chrX	82055899	82066738	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-974P	ENSG00000206826	54572	AL031313.1	ENSG00000228041	430931	None	None
L1FLnI_Xq21.1hd	L1	L1	L1FLnI	chrX	82057255	82066738	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-974P	ENSG00000206826	55928	AL031313.1	ENSG00000228041	430931	None	None
L1FLnI_Xq21.1id	L1	L1	L1FLnI	chrX	82095762	82107335	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031313.1	ENSG00000228041	390334	RNU6-974P	ENSG00000206826	94435	None	None
L1FLnI_Xq21.1jd	L1	L1	L1FLnI	chrX	82192230	82200844	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL031313.1	ENSG00000228041	296825	RNU6-974P	ENSG00000206826	190903	None	None
L1FLnI_Xq21.1kd	L1	L1	L1FLnI	chrX	82212640	82224337	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL031313.1	ENSG00000228041	273332	RNU6-974P	ENSG00000206826	211313	None	None
L1FLnI_Xq21.1ld	L1	L1	L1FLnI	chrX	82384796	82393980	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-974P	ENSG00000206826	383469	AL031313.1	ENSG00000228041	103689	None	None
L1FLnI_Xq21.1md	L1	L1	L1FLnI	chrX	82404380	82413784	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031313.1	ENSG00000228041	83885	RNU6-974P	ENSG00000206826	403053	None	None
L1FLnI_Xq21.1nd	L1	L1	L1FLnI	chrX	82441798	82452078	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-974P	ENSG00000206826	440471	AL031313.1	ENSG00000228041	45591	None	None
L1FLnI_Xq21.1od	L1	L1	L1FLnI	chrX	82471598	82480178	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031313.1	ENSG00000228041	17491	RNU6-974P	ENSG00000206826	470271	None	None
L1FLnI_Xq21.1pd	L1	L1	L1FLnI	chrX	82497443	82505985	-	noncoding	AL031313.1	processed_pseudogene	SENSE	ENSG00000228041	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1qd	L1	L1	L1FLnI	chrX	82546014	82556072	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL109931.1	ENSG00000202183	5129	RPL22P22	ENSG00000213653	39202	None	None
L1FLnI_Xq21.1rd	L1	L1	L1FLnI	chrX	82546034	82556072	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL109931.1	ENSG00000202183	5129	RPL22P22	ENSG00000213653	39222	None	None
L1FLnI_Xq21.1sd	L1	L1	L1FLnI	chrX	82567918	82577374	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL008987.1	ENSG00000236365	298275	AL109931.1	ENSG00000202183	6571	None	None
L1FLnI_Xq21.1td	L1	L1	L1FLnI	chrX	82567918	82577266	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL008987.1	ENSG00000236365	298383	AL109931.1	ENSG00000202183	6571	None	None
L1FLnI_Xq21.1ud	L1	L1	L1FLnI	chrX	82576306	82585298	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL008987.1	ENSG00000236365	290351	AL109931.1	ENSG00000202183	14959	None	None
L1FLnI_Xq21.1vd	L1	L1	L1FLnI	chrX	82768870	82778515	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL008987.1	ENSG00000236365	97134	AL109931.1	ENSG00000202183	207523	None	None
L1FLnI_Xq21.1wd	L1	L1	L1FLnI	chrX	82769262	82778515	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL008987.1	ENSG00000236365	97134	AL109931.1	ENSG00000202183	207915	None	None
L1FLnI_Xq21.1xd	L1	L1	L1FLnI	chrX	82784776	82794955	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL109931.1	ENSG00000202183	223429	AL008987.1	ENSG00000236365	80694	None	None
L1FLnI_Xq21.1yd	L1	L1	L1FLnI	chrX	82802303	82812440	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL008987.1	ENSG00000236365	63209	AL109931.1	ENSG00000202183	240956	None	None
L1FLI_Xq21.1	L1	L1	L1FLI	chrX	83058592	83066639	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	Z82170.1	ENSG00000279437	439384	ATG4AP1	ENSG00000232735	59356	None	None
L1FLnI_Xq21.1zd	L1	L1	L1FLnI	chrX	83123711	83133637	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATG4AP1	ENSG00000232735	124475	Z82170.1	ENSG00000279437	372386	None	None
L1FLnI_Xq21.1ae	L1	L1	L1FLnI	chrX	83226456	83235646	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z82170.1	ENSG00000279437	270377	ATG4AP1	ENSG00000232735	227220	None	None
L1FLnI_Xq21.1be	L1	L1	L1FLnI	chrX	83229086	83239054	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ATG4AP1	ENSG00000232735	229850	Z82170.1	ENSG00000279437	266969	None	None
L1FLnI_Xq21.1ce	L1	L1	L1FLnI	chrX	83282799	83292922	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATG4AP1	ENSG00000232735	283563	Z82170.1	ENSG00000279437	213101	None	None
L1FLnI_Xq21.1de	L1	L1	L1FLnI	chrX	83403640	83413700	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ATG4AP1	ENSG00000232735	404404	Z82170.1	ENSG00000279437	92323	None	None
L1FLnI_Xq21.1ee	L1	L1	L1FLnI	chrX	83446874	83455931	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z82170.1	ENSG00000279437	50092	ATG4AP1	ENSG00000232735	447638	None	None
L1FLnI_Xq21.1fe	L1	L1	L1FLnI	chrX	83469656	83478975	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ATG4AP1	ENSG00000232735	470420	Z82170.1	ENSG00000279437	27048	None	None
L1FLnI_Xq21.1ge	L1	L1	L1FLnI	chrX	83538898	83548920	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	POU3F4	ENSG00000196767	26771	AL121882.1	ENSG00000236870	10976	None	None
L1FLnI_Xq21.1he	L1	L1	L1FLnI	chrX	83561250	83571142	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TERF1P4	ENSG00000215102	177683	AL121882.1	ENSG00000236870	938	None	None
L1FLnI_Xq21.1ie	L1	L1	L1FLnI	chrX	83579825	83588607	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121882.1	ENSG00000236870	19513	TERF1P4	ENSG00000215102	160218	None	None
L1FLnI_Xq21.1je	L1	L1	L1FLnI	chrX	83649064	83659248	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TERF1P4	ENSG00000215102	89577	AL121882.1	ENSG00000236870	88752	None	None
L1FLnI_Xq21.1ke	L1	L1	L1FLnI	chrX	83682437	83692851	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TERF1P4	ENSG00000215102	55974	AL121882.1	ENSG00000236870	122125	None	None
L1FLnI_Xq21.1le	L1	L1	L1FLnI	chrX	83734491	83744509	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121882.1	ENSG00000236870	174179	TERF1P4	ENSG00000215102	4316	None	None
L1FLnI_Xq21.1me	L1	L1	L1FLnI	chrX	83735453	83744509	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121882.1	ENSG00000236870	175141	TERF1P4	ENSG00000215102	4316	None	None
L1FLnI_Xq21.1ne	L1	L1	L1FLnI	chrX	83747002	83757148	+	coding	TERF1P4	processed_pseudogene	ANTISENSE	ENSG00000215102	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrX:83749208-83749212
L1FLnI_Xq21.1oe	L1	L1	L1FLnI	chrX	83895133	83905655	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYLC1	ENSG00000183035	8434	RPS6KA6	ENSG00000072133	152691	None	None
L1FLnI_Xq21.1pe	L1	L1	L1FLnI	chrX	83919785	83928444	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS6KA6	ENSG00000072133	129902	CYLC1	ENSG00000183035	33086	None	None
L1FLnI_Xq21.1qe	L1	L1	L1FLnI	chrX	83937417	83948180	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPS6KA6	ENSG00000072133	110166	CYLC1	ENSG00000183035	50718	None	None
L1FLnI_Xq21.1re	L1	L1	L1FLnI	chrX	83965980	83974482	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYLC1	ENSG00000183035	79281	RPS6KA6	ENSG00000072133	83864	None	None
L1FLnI_Xq21.1se	L1	L1	L1FLnI	chrX	83980564	83991187	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CYLC1	ENSG00000183035	93865	RPS6KA6	ENSG00000072133	67159	None	None
L1FLnI_Xq21.1te	L1	L1	L1FLnI	chrX	84082762	84093408	-	noncoding	RPS6KA6	protein_coding	SENSE	ENSG00000072133	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1ue	L1	L1	L1FLnI	chrX	84262196	84271520	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	HDX	ENSG00000165259	46354	MIR548I4	ENSG00000221494	36368	None	None
L1FLnI_Xq21.1ve	L1	L1	L1FLnI	chrX	84306035	84317157	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548I4	ENSG00000221494	80207	HDX	ENSG00000165259	717	None	None
L1FLnI_Xq21.1we	L1	L1	L1FLnI	chrX	84372583	84383501	+	noncoding	HDX	protein_coding	ANTISENSE	ENSG00000165259	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1xe	L1	L1	L1FLnI	chrX	84385014	84393684	-	noncoding	HDX	protein_coding	SENSE	ENSG00000165259	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1ye	L1	L1	L1FLnI	chrX	84390328	84401274	-	noncoding	HDX	protein_coding	SENSE	ENSG00000165259	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1ze	L1	L1	L1FLnI	chrX	84552044	84562188	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HDX	ENSG00000165259	49565	SETP4	ENSG00000237211	192948	None	None
L1FLnI_Xq21.1af	L1	L1	L1FLnI	chrX	84567680	84578190	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HDX	ENSG00000165259	65201	SETP4	ENSG00000237211	176946	None	None
L1FLnI_Xq21.1bf	L1	L1	L1FLnI	chrX	84587799	84598193	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HDX	ENSG00000165259	85320	SETP4	ENSG00000237211	156943	None	None
L1FLnI_Xq21.1cf	L1	L1	L1FLnI	chrX	84665714	84676020	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HDX	ENSG00000165259	163235	SETP4	ENSG00000237211	79116	None	None
L1FLnI_Xq21.1df	L1	L1	L1FLnI	chrX	84675230	84685237	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SETP4	ENSG00000237211	69899	HDX	ENSG00000165259	172751	None	None
L1FLnI_Xq21.1ef	L1	L1	L1FLnI	chrX	84675651	84685237	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SETP4	ENSG00000237211	69899	HDX	ENSG00000165259	173172	None	None
L1FLnI_Xq21.1ff	L1	L1	L1FLnI	chrX	84923649	84932408	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2DNL	ENSG00000229547	1743	SETP4	ENSG00000237211	167646	None	None
L1FLnI_Xq21.1gf	L1	L1	L1FLnI	chrX	85009866	85019056	-	noncoding	APOOL	protein_coding	ANTISENSE	ENSG00000155008	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1hf	L1	L1	L1FLnI	chrX	85009866	85019042	-	noncoding	APOOL	protein_coding	ANTISENSE	ENSG00000155008	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1if	L1	L1	L1FLnI	chrX	85076613	85086020	-	coding	APOOL	protein_coding	ANTISENSE	ENSG00000155008	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1jf	L1	L1	L1FLnI	chrX	85076614	85086020	-	coding	APOOL	protein_coding	ANTISENSE	ENSG00000155008	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1kf	L1	L1	L1FLnI	chrX	85127155	85137287	-	coding	SATL1	protein_coding	SENSE	ENSG00000184788	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1lf	L1	L1	L1FLnI	chrX	85143339	85153479	+	coding	SATL1,Z99571.1	protein_coding,unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000184788,ENSG00000283446	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1mf	L1	L1	L1FLnI	chrX	85227862	85239368	+	noncoding	SATL1	protein_coding	ANTISENSE	ENSG00000184788	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1nf	L1	L1	L1FLnI	chrX	85293546	85302203	-	noncoding	POF1B	protein_coding	SENSE	ENSG00000124429	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.1of	L1	L1	L1FLnI	chrX	85359659	85369463	-	noncoding	POF1B	protein_coding	SENSE	ENSG00000124429	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.2a	L1	L1	L1FLnI	chrX	85421336	85431362	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1321	ENSG00000283435	404418	POF1B	ENSG00000124429	41619	None	None
L1FLnI_Xq21.2b	L1	L1	L1FLnI	chrX	85460464	85469932	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POF1B	ENSG00000124429	80747	MIR1321	ENSG00000283435	365848	None	None
L1FLnI_Xq21.2c	L1	L1	L1FLnI	chrX	85482741	85493274	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1321	ENSG00000283435	342506	POF1B	ENSG00000124429	103024	None	None
L1FLnI_Xq21.2d	L1	L1	L1FLnI	chrX	85521707	85532084	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1321	ENSG00000283435	303696	POF1B	ENSG00000124429	141990	None	None
L1FLnI_Xq21.2e	L1	L1	L1FLnI	chrX	85525715	85535730	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	POF1B	ENSG00000124429	145998	MIR1321	ENSG00000283435	300050	None	None
L1FLnI_Xq21.2f	L1	L1	L1FLnI	chrX	85554932	85565369	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1321	ENSG00000283435	270411	POF1B	ENSG00000124429	175215	None	None
L1FLnI_Xq21.2g	L1	L1	L1FLnI	chrX	85579663	85589799	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POF1B	ENSG00000124429	199946	MIR1321	ENSG00000283435	245981	None	None
L1FLnI_Xq21.2h	L1	L1	L1FLnI	chrX	85614117	85622782	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1321	ENSG00000283435	212998	POF1B	ENSG00000124429	234400	None	None
L1FLnI_Xq21.2i	L1	L1	L1FLnI	chrX	85635633	85645104	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1321	ENSG00000283435	190676	POF1B	ENSG00000124429	255916	None	None
L1FLnI_Xq21.2j	L1	L1	L1FLnI	chrX	85692694	85703138	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1321	ENSG00000283435	132642	POF1B	ENSG00000124429	312977	None	None
L1FLnI_Xq21.2k	L1	L1	L1FLnI	chrX	85728023	85737186	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1321	ENSG00000283435	98594	POF1B	ENSG00000124429	348306	None	None
L1FLnI_Xq21.2l	L1	L1	L1FLnI	chrX	85751224	85761367	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1321	ENSG00000283435	74413	POF1B	ENSG00000124429	371507	None	None
L1FLnI_Xq21.2m	L1	L1	L1FLnI	chrX	85766397	85776534	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1321	ENSG00000283435	59246	POF1B	ENSG00000124429	386680	None	None
L1FLnI_Xq21.2n	L1	L1	L1FLnI	chrX	85802443	85812569	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1321	ENSG00000283435	23211	POF1B	ENSG00000124429	422726	None	None
L1FLnI_Xq21.2o	L1	L1	L1FLnI	chrX	85803756	85812569	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR1321	ENSG00000283435	23211	POF1B	ENSG00000124429	424039	None	None
L1FLnI_Xq21.2p	L1	L1	L1FLnI	chrX	85817503	85828087	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POF1B	ENSG00000124429	437786	MIR1321	ENSG00000283435	7693	None	None
L1FLnI_Xq21.2q	L1	L1	L1FLnI	chrX	85817503	85826314	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	POF1B	ENSG00000124429	437786	MIR1321	ENSG00000283435	9466	None	None
L1FLnI_Xq21.2r	L1	L1	L1FLnI	chrX	85998936	86008915	+	coding	CHM	protein_coding	ANTISENSE	ENSG00000188419	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chrX:86000817-86000819
L1FLnI_Xq21.2s	L1	L1	L1FLnI	chrX	86112818	86122848	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TPMTP4	ENSG00000223574	6045	STIP1P3	ENSG00000225536	26479	None	None
L1FLnI_Xq21.2t	L1	L1	L1FLnI	chrX	86112832	86122848	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TPMTP4	ENSG00000223574	6045	STIP1P3	ENSG00000225536	26493	None	None
L1FLnI_Xq21.2u	L1	L1	L1FLnI	chrX	86164699	86174205	-	noncoding	DACH2	protein_coding	ANTISENSE	ENSG00000126733	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.2v	L1	L1	L1FLnI	chrX	86193224	86201952	+	noncoding	DACH2	protein_coding	SENSE	ENSG00000126733	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.2w	L1	L1	L1FLnI	chrX	86288910	86298925	-	coding	DACH2	protein_coding	ANTISENSE	ENSG00000126733	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.2x	L1	L1	L1FLnI	chrX	86288922	86298925	-	coding	DACH2	protein_coding	ANTISENSE	ENSG00000126733	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.2y	L1	L1	L1FLnI	chrX	86394891	86405024	-	coding	DACH2	protein_coding	ANTISENSE	ENSG00000126733	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.2z	L1	L1	L1FLnI	chrX	86449561	86459785	-	noncoding	DACH2	protein_coding	ANTISENSE	ENSG00000126733	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.2aa	L1	L1	L1FLnI	chrX	86635558	86646566	+	noncoding	DACH2	protein_coding	SENSE	ENSG00000126733	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.2ba	L1	L1	L1FLnI	chrX	86877088	86887296	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z82210.1	ENSG00000236190	1290	DACH2	ENSG00000126733	44484	None	None
L1FLnI_Xq21.2ca	L1	L1	L1FLnI	chrX	86930708	86940553	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590229.2	ENSG00000271457	203301	Z82210.1	ENSG00000236190	41892	None	None
L1FLnI_Xq21.2da	L1	L1	L1FLnI	chrX	86966133	86976151	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	Z82210.1	ENSG00000236190	77317	AL590229.2	ENSG00000271457	167703	None	None
L1FLnI_Xq21.31a	L1	L1	L1FLnI	chrX	87013334	87021995	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z82210.1	ENSG00000236190	124518	AL590229.2	ENSG00000271457	121859	None	None
L1FLnI_Xq21.31b	L1	L1	L1FLnI	chrX	87092562	87102435	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590229.2	ENSG00000271457	41419	Z82210.1	ENSG00000236190	203746	None	None
L1FLnI_Xq21.31c	L1	L1	L1FLnI	chrX	87112808	87122837	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	Z82210.1	ENSG00000236190	223992	AL590229.2	ENSG00000271457	21017	None	None
L1FLnI_Xq21.31d	L1	L1	L1FLnI	chrX	87124824	87134348	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z82210.1	ENSG00000236190	236008	AL590229.2	ENSG00000271457	9506	None	None
L1FLnI_Xq21.31e	L1	L1	L1FLnI	chrX	87250862	87260273	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590229.1	ENSG00000200422	104058	Z96811.1	ENSG00000230478	165310	None	None
L1FLnI_Xq21.31f	L1	L1	L1FLnI	chrX	87352836	87362603	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL590229.1	ENSG00000200422	206032	Z96811.1	ENSG00000230478	62980	None	None
L1FLnI_Xq21.31g	L1	L1	L1FLnI	chrX	87442628	87452769	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	KLHL4	ENSG00000102271	64640	Z96811.1	ENSG00000230478	16938	None	None
L1FLnI_Xq21.31h	L1	L1	L1FLnI	chrX	87544348	87553203	+	noncoding	KLHL4	protein_coding	SENSE	ENSG00000102271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.31i	L1	L1	L1FLnI	chrX	87579804	87590248	+	noncoding	KLHL4	protein_coding	SENSE	ENSG00000102271	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.31j	L1	L1	L1FLnI	chrX	87774613	87784551	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z83818.2	ENSG00000282914	23730	AL136363.1	ENSG00000270446	21882	None	None
L1FLnI_Xq21.31k	L1	L1	L1FLnI	chrX	87817909	87827919	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL136363.2	ENSG00000271056	8026	AL035246.1	ENSG00000230706	233671	None	None
L1FLnI_Xq21.31l	L1	L1	L1FLnI	chrX	87829767	87839369	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL035246.1	ENSG00000230706	222221	AL136363.2	ENSG00000271056	19884	None	None
L1FLnI_Xq21.31m	L1	L1	L1FLnI	chrX	87839626	87848674	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL035246.1	ENSG00000230706	212916	AL136363.2	ENSG00000271056	29743	None	None
L1FLnI_Xq21.31n	L1	L1	L1FLnI	chrX	87881408	87890362	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL035246.1	ENSG00000230706	171228	AL136363.2	ENSG00000271056	71525	None	None
L1FLnI_Xq21.31o	L1	L1	L1FLnI	chrX	87958270	87967235	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL136363.2	ENSG00000271056	148387	AL035246.1	ENSG00000230706	94355	None	None
L1FLnI_Xq21.31p	L1	L1	L1FLnI	chrX	88183445	88192516	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL024493.1	ENSG00000252016	34527	AL929325.1	ENSG00000271693	176827	None	None
L1FLnI_Xq21.31q	L1	L1	L1FLnI	chrX	88190921	88199842	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL024493.1	ENSG00000252016	42003	AL929325.1	ENSG00000271693	169501	None	None
L1FLnI_Xq21.31r	L1	L1	L1FLnI	chrX	88204387	88214419	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL024493.1	ENSG00000252016	55469	AL929325.1	ENSG00000271693	154924	None	None
L1FLnI_Xq21.31s	L1	L1	L1FLnI	chrX	88306341	88315007	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL024493.1	ENSG00000252016	157423	AL929325.1	ENSG00000271693	54336	None	None
L1FLnI_Xq21.31t	L1	L1	L1FLnI	chrX	88343443	88352571	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL024493.1	ENSG00000252016	194525	AL929325.1	ENSG00000271693	16772	None	None
L1FLnI_Xq21.31u	L1	L1	L1FLnI	chrX	88381577	88390442	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL929325.1	ENSG00000271693	12118	CPXCR1	ENSG00000147183	356783	None	None
L1FLnI_Xq21.31v	L1	L1	L1FLnI	chrX	88622435	88631337	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL929325.1	ENSG00000271693	252976	CPXCR1	ENSG00000147183	115888	None	None
L1FLnI_Xq21.31w	L1	L1	L1FLnI	chrX	88627338	88636413	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL929325.1	ENSG00000271693	257879	CPXCR1	ENSG00000147183	110812	None	None
L1FLnI_Xq21.31x	L1	L1	L1FLnI	chrX	88780911	88791062	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL022154.1	ENSG00000271157	36492	CPXCR1	ENSG00000147183	26126	None	None
L1FLnI_Xq21.31y	L1	L1	L1FLnI	chrX	88796901	88806317	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CPXCR1	ENSG00000147183	42116	AL022154.1	ENSG00000271157	21237	None	None
L1FLnI_Xq21.31z	L1	L1	L1FLnI	chrX	89120763	89132523	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SRIP2	ENSG00000224065	234912	AL731768.1	ENSG00000270745	138410	None	None
L1FLnI_Xq21.31aa	L1	L1	L1FLnI	chrX	89162121	89172064	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL731768.1	ENSG00000270745	179768	SRIP2	ENSG00000224065	195371	None	None
L1FLnI_Xq21.31ba	L1	L1	L1FLnI	chrX	89273080	89283966	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL731768.1	ENSG00000270745	290727	SRIP2	ENSG00000224065	83469	None	None
L1FLnI_Xq21.31ca	L1	L1	L1FLnI	chrX	89273080	89283708	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL731768.1	ENSG00000270745	290727	SRIP2	ENSG00000224065	83727	None	None
L1FLnI_Xq21.31da	L1	L1	L1FLnI	chrX	89289131	89299157	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL731768.1	ENSG00000270745	306778	SRIP2	ENSG00000224065	68278	None	None
L1FLnI_Xq21.31ea	L1	L1	L1FLnI	chrX	89393636	89404467	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121872.1	ENSG00000225012	19271	SRIP2	ENSG00000224065	26036	None	None
L1FLnI_Xq21.31fa	L1	L1	L1FLnI	chrX	89491800	89503383	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TGIF2LX	ENSG00000153779	418525	AL121872.1	ENSG00000225012	44817	None	None
L1FLnI_Xq21.31ga	L1	L1	L1FLnI	chrX	89519376	89528541	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TGIF2LX	ENSG00000153779	393367	AL121872.1	ENSG00000225012	72393	None	None
L1FLnI_Xq21.31ha	L1	L1	L1FLnI	chrX	89670318	89680824	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121872.1	ENSG00000225012	223335	TGIF2LX	ENSG00000153779	241084	None	None
L1FLnI_Xq21.31ia	L1	L1	L1FLnI	chrX	89734479	89742993	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TGIF2LX	ENSG00000153779	178915	AL121872.1	ENSG00000225012	287496	None	None
L1FLnI_Xq21.31ja	L1	L1	L1FLnI	chrX	90001691	90010999	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121877.1	ENSG00000227581	28214	TGIF2LX	ENSG00000153779	78808	None	None
L1FLnI_Xq21.31ka	L1	L1	L1FLnI	chrX	90244137	90253396	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNF19BPX	ENSG00000227434	33717	UBE2V1P9	ENSG00000229667	36140	None	None
L1FLnI_Xq21.31la	L1	L1	L1FLnI	chrX	90409288	90420144	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-555P	ENSG00000207515	177091	UBE2V1P9	ENSG00000229667	119385	None	None
L1FLnI_Xq21.31ma	L1	L1	L1FLnI	chrX	90411177	90420144	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-555P	ENSG00000207515	177091	UBE2V1P9	ENSG00000229667	121274	None	None
L1FLnI_Xq21.31na	L1	L1	L1FLnI	chrX	90418619	90428404	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2V1P9	ENSG00000229667	128716	RNU6-555P	ENSG00000207515	168831	None	None
L1FLnI_Xq21.31oa	L1	L1	L1FLnI	chrX	90511273	90520169	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UBE2V1P9	ENSG00000229667	221370	RNU6-555P	ENSG00000207515	77066	None	None
L1FLnI_Xq21.31pa	L1	L1	L1FLnI	chrX	90630496	90639375	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-555P	ENSG00000207515	33156	AL121823.1	ENSG00000206062	668406	None	None
L1FLnI_Xq21.31qa	L1	L1	L1FLnI	chrX	90655605	90666052	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121823.1	ENSG00000206062	641729	RNU6-555P	ENSG00000207515	58265	None	None
L1FLnI_Xq21.31ra	L1	L1	L1FLnI	chrX	90733538	90743923	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-555P	ENSG00000207515	136198	AL121823.1	ENSG00000206062	563858	None	None
L1FLnI_Xq21.31sa	L1	L1	L1FLnI	chrX	90832732	90842867	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-555P	ENSG00000207515	235392	AL121823.1	ENSG00000206062	464914	None	None
L1FLnI_Xq21.31ta	L1	L1	L1FLnI	chrX	90842320	90852503	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121823.1	ENSG00000206062	455278	RNU6-555P	ENSG00000207515	244980	None	chrX:90847883-90847886
L1FLnI_Xq21.31ua	L1	L1	L1FLnI	chrX	90896373	90907013	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121823.1	ENSG00000206062	400768	RNU6-555P	ENSG00000207515	299033	None	None
L1FLnI_Xq21.31va	L1	L1	L1FLnI	chrX	90979526	90989457	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-555P	ENSG00000207515	382186	AL121823.1	ENSG00000206062	318324	None	None
L1FLnI_Xq21.31wa	L1	L1	L1FLnI	chrX	91034765	91044137	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121823.1	ENSG00000206062	263644	RNU6-555P	ENSG00000207515	437425	None	None
L1FLnI_Xq21.31xa	L1	L1	L1FLnI	chrX	91239431	91249075	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121823.1	ENSG00000206062	58706	RNU6-555P	ENSG00000207515	642091	None	None
L1FLnI_Xq21.31ya	L1	L1	L1FLnI	chrX	91240099	91249075	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121823.1	ENSG00000206062	58706	RNU6-555P	ENSG00000207515	642759	None	None
L1FLnI_Xq21.31za	L1	L1	L1FLnI	chrX	91293996	91303767	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121823.1	ENSG00000206062	4014	RNU6-555P	ENSG00000207515	696656	None	None
L1FLnI_Xq21.31ab	L1	L1	L1FLnI	chrX	91380877	91390210	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121823.1	ENSG00000206062	71999	PABPC5-AS1	ENSG00000234161	24668	None	None
L1FLnI_Xq21.31bb	L1	L1	L1FLnI	chrX	91496107	91505686	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PABPC5	ENSG00000174740	57523	SERBP1P4	ENSG00000230275	54750	None	None
L1FLnI_Xq21.31cb	L1	L1	L1FLnI	chrX	91623598	91633753	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SERBP1P4	ENSG00000230275	62001	PCDH11X	ENSG00000102290	145508	None	None
L1FLnI_Xq21.31db	L1	L1	L1FLnI	chrX	91712326	91722729	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERBP1P4	ENSG00000230275	150729	PCDH11X	ENSG00000102290	56532	None	None
L1FLnI_Xq21.31eb	L1	L1	L1FLnI	chrX	91727971	91737805	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PCDH11X	ENSG00000102290	41456	SERBP1P4	ENSG00000230275	166374	None	None
L1FLnI_Xq21.31fb	L1	L1	L1FLnI	chrX	91749302	91759328	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SERBP1P4	ENSG00000230275	187705	PCDH11X	ENSG00000102290	19933	None	None
L1FLnI_Xq21.31gb	L1	L1	L1FLnI	chrX	91819172	91829202	-	coding	PCDH11X	protein_coding	ANTISENSE	ENSG00000102290	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.31hb	L1	L1	L1FLnI	chrX	91861557	91870328	-	noncoding	PCDH11X	protein_coding	ANTISENSE	ENSG00000102290	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.31ib	L1	L1	L1FLnI	chrX	91909174	91918502	+	coding	PCDH11X	protein_coding	SENSE	ENSG00000102290	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.31jb	L1	L1	L1FLnI	chrX	92016270	92026692	+	noncoding	PCDH11X	protein_coding	SENSE	ENSG00000102290	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.31kb	L1	L1	L1FLnI	chrX	92211563	92221712	+	coding	PCDH11X	protein_coding	SENSE	ENSG00000102290	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.32a	L1	L1	L1FLnI	chrX	92712438	92722171	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL121871.1	ENSG00000225912	35484	TUSC2P2	ENSG00000285445	48684	None	None
L1FLnI_Xq21.32b	L1	L1	L1FLnI	chrX	92746213	92755438	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TUSC2P2	ENSG00000285445	15417	AL121871.1	ENSG00000225912	69259	None	None
L1FLnI_Xq21.32c	L1	L1	L1FLnI	chrX	92769379	92780000	+	noncoding	TUSC2P2	processed_pseudogene	SENSE	ENSG00000285445	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.32d	L1	L1	L1FLnI	chrX	92890675	92900222	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158053.1	ENSG00000237873	142268	TUSC2P2	ENSG00000285445	118584	None	None
L1FLnI_Xq21.32e	L1	L1	L1FLnI	chrX	93056740	93066831	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL158053.1	ENSG00000237873	13798	AL359263.1	ENSG00000234130	155389	None	None
L1FLnI_Xq21.32f	L1	L1	L1FLnI	chrX	93149895	93159113	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158053.1	ENSG00000237873	106953	AL359263.1	ENSG00000234130	63107	None	None
L1FLnI_Xq21.32g	L1	L1	L1FLnI	chrX	93189341	93198836	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL158053.1	ENSG00000237873	146399	AL359263.1	ENSG00000234130	23384	None	None
L1FLnI_Xq21.32h	L1	L1	L1FLnI	chrX	93463954	93475183	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL023280.1	ENSG00000237381	74457	RPL7P55	ENSG00000228301	98651	None	None
L1FLnI_Xq21.32i	L1	L1	L1FLnI	chrX	93623832	93633981	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7P55	ENSG00000228301	49253	NAP1L3	ENSG00000186310	36949	None	None
L1FLnI_Xq21.32j	L1	L1	L1FLnI	chrX	93734009	93743132	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z94722.1	ENSG00000270826	33779	FAM133A	ENSG00000179083	21735	None	None
L1FLnI_Xq21.32k	L1	L1	L1FLnI	chrX	93890117	93898884	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-332P	ENSG00000212495	104931	Z94722.1	ENSG00000270826	112733	None	None
L1FLnI_Xq21.32l	L1	L1	L1FLnI	chrX	93936243	93946400	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	Z94722.1	ENSG00000270826	158859	RNU6-332P	ENSG00000212495	57415	None	None
L1FLnI_Xq21.32m	L1	L1	L1FLnI	chrX	93996077	94005842	-	noncoding	RNU6-332P	snRNA	SENSE	ENSG00000212495	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.32n	L1	L1	L1FLnI	chrX	94253623	94264496	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL022149.1	ENSG00000202410	75517	AL390840.1	ENSG00000227521	54542	None	None
L1FLnI_Xq21.32o	L1	L1	L1FLnI	chrX	94253623	94263640	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL022149.1	ENSG00000202410	75517	AL390840.1	ENSG00000227521	55398	None	None
L1FLnI_Xq21.32p	L1	L1	L1FLnI	chrX	94279579	94289079	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390840.1	ENSG00000227521	29959	AL022149.1	ENSG00000202410	101473	None	None
L1FLnI_Xq21.32q	L1	L1	L1FLnI	chrX	94296175	94306731	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL390840.1	ENSG00000227521	12307	AL022149.1	ENSG00000202410	118069	None	None
L1FLnI_Xq21.33a	L1	L1	L1FLnI	chrX	94397217	94405724	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PAICSP7	ENSG00000232293	230939	AL390840.1	ENSG00000227521	77192	None	None
L1FLnI_Xq21.33b	L1	L1	L1FLnI	chrX	94606684	94617839	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PAICSP7	ENSG00000232293	18824	AL390840.1	ENSG00000227521	286659	None	None
L1FLnI_Xq21.33c	L1	L1	L1FLnI	chrX	94739199	94747823	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCNB1IP1P3	ENSG00000231001	28916	PAICSP7	ENSG00000232293	99629	None	None
L1FLnI_Xq21.33d	L1	L1	L1FLnI	chrX	94763086	94772599	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CCNB1IP1P3	ENSG00000231001	4140	PAICSP7	ENSG00000232293	123516	None	None
L1FLnI_Xq21.33e	L1	L1	L1FLnI	chrX	94779142	94787690	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCNB1IP1P3	ENSG00000231001	1575	MIR548M	ENSG00000221187	275451	None	None
L1FLnI_Xq21.33f	L1	L1	L1FLnI	chrX	94838707	94849152	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548M	ENSG00000221187	213989	CCNB1IP1P3	ENSG00000231001	61140	None	None
L1FLnI_Xq21.33g	L1	L1	L1FLnI	chrX	94852107	94860751	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCNB1IP1P3	ENSG00000231001	74540	MIR548M	ENSG00000221187	202390	None	None
L1FLnI_Xq21.33h	L1	L1	L1FLnI	chrX	94858877	94868900	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CCNB1IP1P3	ENSG00000231001	81310	MIR548M	ENSG00000221187	194241	None	None
L1FLnI_Xq21.33i	L1	L1	L1FLnI	chrX	94895492	94906169	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548M	ENSG00000221187	156972	CCNB1IP1P3	ENSG00000231001	117925	None	None
L1FLnI_Xq21.33j	L1	L1	L1FLnI	chrX	94938810	94949280	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CCNB1IP1P3	ENSG00000231001	161243	MIR548M	ENSG00000221187	113861	None	None
L1FLnI_Xq21.33k	L1	L1	L1FLnI	chrX	94972775	94982310	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548M	ENSG00000221187	80831	CCNB1IP1P3	ENSG00000231001	195208	None	None
L1FLnI_Xq21.33l	L1	L1	L1FLnI	chrX	95191070	95200278	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL022161.1	ENSG00000271094	253091	MIR548M	ENSG00000221187	127844	None	None
L1FLnI_Xq21.33m	L1	L1	L1FLnI	chrX	95197272	95207127	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL022161.1	ENSG00000271094	246242	MIR548M	ENSG00000221187	134046	None	None
L1FLnI_Xq21.33n	L1	L1	L1FLnI	chrX	95221498	95231348	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548M	ENSG00000221187	158272	AL022161.1	ENSG00000271094	222021	None	None
L1FLnI_Xq21.33o	L1	L1	L1FLnI	chrX	95221498	95231347	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548M	ENSG00000221187	158272	AL022161.1	ENSG00000271094	222022	None	None
L1FLnI_Xq21.33p	L1	L1	L1FLnI	chrX	95235369	95246945	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548M	ENSG00000221187	172143	AL022161.1	ENSG00000271094	206424	None	None
L1FLnI_Xq21.33q	L1	L1	L1FLnI	chrX	95270217	95280714	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR548M	ENSG00000221187	206991	AL022161.1	ENSG00000271094	172655	None	None
L1FLnI_Xq21.33r	L1	L1	L1FLnI	chrX	95543393	95553404	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP510	ENSG00000201567	28660	CALM1P1	ENSG00000223467	43357	None	None
L1FLnI_Xq21.33s	L1	L1	L1FLnI	chrX	95612472	95622912	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPDLP1	ENSG00000226307	15463	HNRNPDLP3	ENSG00000236185	1515	None	None
L1FLnI_Xq21.33t	L1	L1	L1FLnI	chrX	95662379	95671004	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPDLP1	ENSG00000226307	23455	RPS7P13	ENSG00000235425	8126	None	None
L1FLnI_Xq21.33u	L1	L1	L1FLnI	chrX	95864321	95874238	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL365400.2	ENSG00000270583	143177	AL137845.2	ENSG00000232842	99090	None	None
L1FLnI_Xq21.33v	L1	L1	L1FLnI	chrX	95865102	95874238	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL365400.2	ENSG00000270583	143958	AL137845.2	ENSG00000232842	99090	None	None
L1FLI_Xq21.33	L1	L1	L1FLI	chrX	96056799	96064845	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL137845.1	ENSG00000203262	5824	RN7SL379P	ENSG00000242998	33147	None	None
L1FLnI_Xq21.33w	L1	L1	L1FLnI	chrX	96084210	96094316	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137845.1	ENSG00000203262	12432	AL022151.1	ENSG00000286523	33431	None	None
L1FLnI_Xq21.33x	L1	L1	L1FLnI	chrX	96197726	96207385	+	noncoding	AL022151.1	lncRNA	ANTISENSE	ENSG00000286523	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.33y	L1	L1	L1FLnI	chrX	96210716	96221167	+	noncoding	AL022151.1	lncRNA	ANTISENSE	ENSG00000286523	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.33z	L1	L1	L1FLnI	chrX	96211143	96221167	+	noncoding	AL022151.1	lncRNA	ANTISENSE	ENSG00000286523	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.33aa	L1	L1	L1FLnI	chrX	96265893	96276020	+	coding	AL022151.1	lncRNA	ANTISENSE	ENSG00000286523	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.33ba	L1	L1	L1FLnI	chrX	96272276	96280783	+	coding	AL022151.1	lncRNA	ANTISENSE	ENSG00000286523	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.33ca	L1	L1	L1FLnI	chrX	96292791	96302346	+	noncoding	AL022151.1	lncRNA	ANTISENSE	ENSG00000286523	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.33da	L1	L1	L1FLnI	chrX	96337404	96347280	-	coding	AL022151.1,BRDTP1	lncRNA,processed_pseudogene	SENSE,SENSE	ENSG00000286523,ENSG00000271209	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.33ea	L1	L1	L1FLnI	chrX	96338753	96347280	-	coding	AL022151.1	lncRNA	SENSE	ENSG00000286523	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.33fa	L1	L1	L1FLnI	chrX	96344879	96354391	-	coding	AL022151.1	lncRNA	SENSE	ENSG00000286523	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.33ga	L1	L1	L1FLnI	chrX	96483245	96493071	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP194	ENSG00000223260	72463	AL606530.1	ENSG00000229693	127583	None	None
L1FLnI_Xq21.33ha	L1	L1	L1FLnI	chrX	96581129	96590594	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP194	ENSG00000223260	170347	AL606530.1	ENSG00000229693	30060	chrX:96581542-96581726	None
L1FLnI_Xq21.33ia	L1	L1	L1FLnI	chrX	96581129	96590584	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP194	ENSG00000223260	170347	AL606530.1	ENSG00000229693	30070	chrX:96581542-96581726	None
L1FLnI_Xq21.33ja	L1	L1	L1FLnI	chrX	96594142	96604283	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP194	ENSG00000223260	183360	AL606530.1	ENSG00000229693	16371	None	None
L1FLnI_Xq21.33ka	L1	L1	L1FLnI	chrX	96809020	96819159	-	noncoding	DIAPH2	protein_coding	ANTISENSE	ENSG00000147202	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.33la	L1	L1	L1FLnI	chrX	97196437	97206835	+	noncoding	DIAPH2	protein_coding	SENSE	ENSG00000147202	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chrX:97199743-97200057	None
L1FLnI_Xq21.33ma	L1	L1	L1FLnI	chrX	97405900	97414870	+	coding	DIAPH2	protein_coding	SENSE	ENSG00000147202	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.33na	L1	L1	L1FLnI	chrX	97509012	97519025	-	coding	DIAPH2,DIAPH2-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000147202,ENSG00000236256	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chrX:97509497-97509500
L1FLnI_Xq21.33oa	L1	L1	L1FLnI	chrX	97577672	97587688	-	coding	DIAPH2,DIAPH2-AS1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000147202,ENSG00000236256	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.33pa	L1	L1	L1FLnI	chrX	97797419	97807530	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL354685.1	ENSG00000233887	39733	DIAPH2-AS1	ENSG00000236256	154830	None	None
L1FLnI_Xq21.33qa	L1	L1	L1FLnI	chrX	97917552	97927701	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL354685.2	ENSG00000237752	9462	AL391666.1	ENSG00000234889	48177	None	None
L1FLnI_Xq21.33ra	L1	L1	L1FLnI	chrX	97917552	97927700	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL354685.2	ENSG00000237752	9462	AL391666.1	ENSG00000234889	48178	None	None
L1FLnI_Xq21.33sa	L1	L1	L1FLnI	chrX	98042895	98053312	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL6P29	ENSG00000236243	198367	AL391666.1	ENSG00000234889	64254	None	None
L1FLnI_Xq21.33ta	L1	L1	L1FLnI	chrX	98050630	98062405	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL6P29	ENSG00000236243	189274	AL391666.1	ENSG00000234889	71989	None	None
L1FLnI_Xq21.33ua	L1	L1	L1FLnI	chrX	98099399	98110765	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL6P29	ENSG00000236243	140914	AL391666.1	ENSG00000234889	120758	None	None
L1FLnI_Xq21.33va	L1	L1	L1FLnI	chrX	98234374	98244806	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL6P29	ENSG00000236243	6873	AL391666.1	ENSG00000234889	255733	None	None
L1FLnI_Xq21.33wa	L1	L1	L1FLnI	chrX	98296854	98306864	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL6P29	ENSG00000236243	44311	AL357312.1	ENSG00000271322	41587	None	None
L1FLnI_Xq21.33xa	L1	L1	L1FLnI	chrX	98338553	98348998	-	noncoding	AL357312.1	processed_pseudogene	SENSE	ENSG00000271322	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.33ya	L1	L1	L1FLnI	chrX	98423827	98433857	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL157778.1	ENSG00000281566	16831	HMGB1P32	ENSG00000226837	1018	None	None
L1FLnI_Xq21.33za	L1	L1	L1FLnI	chrX	98436254	98446267	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB1P32	ENSG00000226837	13445	AL157778.1	ENSG00000281566	4421	None	None
L1FLnI_Xq21.33ab	L1	L1	L1FLnI	chrX	98559603	98569117	-	coding	AL157778.1	lncRNA	ANTISENSE	ENSG00000281566	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.33bb	L1	L1	L1FLnI	chrX	98612780	98622477	-	noncoding	AL157778.1	lncRNA	ANTISENSE	ENSG00000281566	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.33cb	L1	L1	L1FLnI	chrX	98686996	98697014	-	coding	AL157778.1	lncRNA	ANTISENSE	ENSG00000281566	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.33db	L1	L1	L1FLnI	chrX	98693017	98703077	-	noncoding	AL157778.1	lncRNA	ANTISENSE	ENSG00000281566	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.33eb	L1	L1	L1FLnI	chrX	98832821	98843068	-	noncoding	AL157778.1	lncRNA	ANTISENSE	ENSG00000281566	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.33fb	L1	L1	L1FLnI	chrX	98841832	98850912	-	noncoding	AL157778.1	lncRNA	ANTISENSE	ENSG00000281566	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.33gb	L1	L1	L1FLnI	chrX	98841854	98850912	-	noncoding	AL157778.1	lncRNA	ANTISENSE	ENSG00000281566	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.33hb	L1	L1	L1FLnI	chrX	98877037	98887409	+	noncoding	AL157778.1	lncRNA	SENSE	ENSG00000281566	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq21.33ib	L1	L1	L1FLnI	chrX	98909532	98919776	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137843.1	ENSG00000270308	737221	AL157778.1	ENSG00000281566	17471	chrX:98915218-98915608	None
L1FLnI_Xq21.33jb	L1	L1	L1FLnI	chrX	98951260	98960990	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137843.1	ENSG00000270308	696007	AL157778.1	ENSG00000281566	59199	None	None
L1FLnI_Xq21.33kb	L1	L1	L1FLnI	chrX	99041999	99051017	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137843.1	ENSG00000270308	605980	AL157778.1	ENSG00000281566	149938	None	None
L1FLnI_Xq21.33lb	L1	L1	L1FLnI	chrX	99081731	99092474	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL157778.1	ENSG00000281566	189670	AL137843.1	ENSG00000270308	564523	None	None
L1FLnI_Xq22.1a	L1	L1	L1FLnI	chrX	99142714	99152362	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL157778.1	ENSG00000281566	250653	AL137843.1	ENSG00000270308	504635	None	None
L1FLnI_Xq22.1b	L1	L1	L1FLnI	chrX	99149086	99159215	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL157778.1	ENSG00000281566	257025	AL137843.1	ENSG00000270308	497782	None	None
L1FLnI_Xq22.1c	L1	L1	L1FLnI	chrX	99201845	99212774	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137843.1	ENSG00000270308	444223	AL157778.1	ENSG00000281566	309784	None	None
L1FLnI_Xq22.1d	L1	L1	L1FLnI	chrX	99231135	99241260	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL157778.1	ENSG00000281566	339074	AL137843.1	ENSG00000270308	415737	None	None
L1FLnI_Xq22.1e	L1	L1	L1FLnI	chrX	99255600	99264803	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137843.1	ENSG00000270308	392194	AL157778.1	ENSG00000281566	363539	None	None
L1FLnI_Xq22.1f	L1	L1	L1FLnI	chrX	99265854	99275548	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137843.1	ENSG00000270308	381449	AL157778.1	ENSG00000281566	373793	None	None
L1FLnI_Xq22.1g	L1	L1	L1FLnI	chrX	99266220	99275548	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137843.1	ENSG00000270308	381449	AL157778.1	ENSG00000281566	374159	None	None
L1FLnI_Xq22.1h	L1	L1	L1FLnI	chrX	99269693	99281234	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL157778.1	ENSG00000281566	377632	AL137843.1	ENSG00000270308	375763	None	None
L1FLnI_Xq22.1i	L1	L1	L1FLnI	chrX	99388702	99398438	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137843.1	ENSG00000270308	258559	AL157778.1	ENSG00000281566	496641	None	None
L1FLnI_Xq22.1j	L1	L1	L1FLnI	chrX	99394436	99403293	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137843.1	ENSG00000270308	253704	AL157778.1	ENSG00000281566	502375	None	None
L1FLnI_Xq22.1k	L1	L1	L1FLnI	chrX	99480031	99488908	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL137843.1	ENSG00000270308	168089	AL157778.1	ENSG00000281566	587970	None	None
L1FLnI_Xq22.1l	L1	L1	L1FLnI	chrX	99515971	99525910	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL157778.1	ENSG00000281566	623910	AL137843.1	ENSG00000270308	131087	None	None
L1FLnI_Xq22.1m	L1	L1	L1FLnI	chrX	99593501	99602244	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL137843.1	ENSG00000270308	54753	AL157778.1	ENSG00000281566	701440	None	None
L1FLnI_Xq22.1n	L1	L1	L1FLnI	chrX	99718194	99727090	+	noncoding	XRCC6P5	processed_pseudogene	ANTISENSE	ENSG00000215070	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.1o	L1	L1	L1FLnI	chrX	99758020	99768396	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	XRCC6P5	ENSG00000215070	36862	B3GNT2P1	ENSG00000229946	118344	None	None
L1FLnI_Xq22.1p	L1	L1	L1FLnI	chrX	99771323	99782940	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	B3GNT2P1	ENSG00000229946	103800	XRCC6P5	ENSG00000215070	50165	None	None
L1FLnI_Xq22.1q	L1	L1	L1FLnI	chrX	99771323	99781166	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	B3GNT2P1	ENSG00000229946	105574	XRCC6P5	ENSG00000215070	50165	None	None
L1FLnI_Xq22.1r	L1	L1	L1FLnI	chrX	99802058	99811844	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	XRCC6P5	ENSG00000215070	80900	B3GNT2P1	ENSG00000229946	74896	None	None
L1FLnI_Xq22.1s	L1	L1	L1FLnI	chrX	99865555	99874279	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	XRCC6P5	ENSG00000215070	144397	B3GNT2P1	ENSG00000229946	12461	None	None
L1FLnI_Xq22.1t	L1	L1	L1FLnI	chrX	99876801	99887151	+	noncoding	B3GNT2P1	processed_pseudogene	ANTISENSE	ENSG00000229946	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.1u	L1	L1	L1FLnI	chrX	99965754	99974884	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL359641.2	ENSG00000252296	125200	B3GNT2P1	ENSG00000229946	78063	None	None
L1FLnI_Xq22.1v	L1	L1	L1FLnI	chrX	100047286	100057427	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	B3GNT2P1	ENSG00000229946	159595	AL359641.2	ENSG00000252296	42657	None	None
L1FLnI_Xq22.1w	L1	L1	L1FLnI	chrX	100087006	100096045	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	B3GNT2P1	ENSG00000229946	199315	AL359641.2	ENSG00000252296	4039	None	None
L1FLnI_Xq22.1x	L1	L1	L1FLnI	chrX	100131439	100141464	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL359641.2	ENSG00000252296	31267	AL359641.1	ENSG00000236988	8319	None	None
L1FLnI_Xq22.1y	L1	L1	L1FLnI	chrX	100156352	100166519	-	noncoding	RPSAP8	processed_pseudogene	SENSE	ENSG00000230592	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.1z	L1	L1	L1FLnI	chrX	100208316	100218748	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PCDH19	ENSG00000165194	72896	RPSAP8	ENSG00000230592	51543	None	None
L1FLnI_Xq22.1aa	L1	L1	L1FLnI	chrX	100251988	100262133	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP8	ENSG00000230592	95215	PCDH19	ENSG00000165194	29511	None	None
L1FLnI_Xq22.1ba	L1	L1	L1FLnI	chrX	100251988	100262115	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPSAP8	ENSG00000230592	95215	PCDH19	ENSG00000165194	29529	None	None
L1FLnI_Xq22.1ca	L1	L1	L1FLnI	chrX	100300549	100310039	+	noncoding	PCDH19	protein_coding	ANTISENSE	ENSG00000165194	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.1da	L1	L1	L1FLnI	chrX	100300549	100309654	+	noncoding	PCDH19	protein_coding	ANTISENSE	ENSG00000165194	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.1ea	L1	L1	L1FLnI	chrX	100546764	100555948	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PCDH19	ENSG00000165194	136491	TNMD	ENSG00000000005	28988	None	None
L1FLnI_Xq22.1fa	L1	L1	L1FLnI	chrX	101520844	101530996	+	coding	ARMCX4	protein_coding	SENSE	ENSG00000196440	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.1ga	L1	L1	L1FLnI	chrX	101537453	101546866	+	coding	AC234775.2	processed_pseudogene	ANTISENSE	ENSG00000237682	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chrX:101538233-101538567	None
L1FLnI_Xq22.1ha	L1	L1	L1FLnI	chrX	101579537	101589692	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARMCX7P	ENSG00000204072	7818	ARMCX1	ENSG00000126947	24837	None	None
L1FLnI_Xq22.1ia	L1	L1	L1FLnI	chrX	101587166	101595686	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ARMCX7P	ENSG00000204072	1824	ARMCX1	ENSG00000126947	32466	None	None
L1FLnI_Xq22.1ja	L1	L1	L1FLnI	chrX	101710563	101720606	-	coding	FO082842.1	processed_pseudogene	SENSE	ENSG00000229090	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.1ka	L1	L1	L1FLnI	chrX	101710575	101720606	-	coding	FO082842.1	processed_pseudogene	SENSE	ENSG00000229090	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.1la	L1	L1	L1FLnI	chrX	101769728	101779650	-	coding	AL672207.1	processed_pseudogene	SENSE	ENSG00000178146	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.1ma	L1	L1	L1FLnI	chrX	101816074	101826476	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NXF5	ENSG00000126952	5636	AL672207.1	ENSG00000178146	35536	None	None
L1FLnI_Xq22.1na	L1	L1	L1FLnI	chrX	101946373	101956840	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZMAT1	ENSG00000166432	14294	H2BP8	ENSG00000235976	32641	None	None
L1FLnI_Xq22.1oa	L1	L1	L1FLnI	chrX	102027948	102038082	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTND6P13	ENSG00000234901	18902	TCEAL2	ENSG00000184905	87597	None	None
L1FLnI_Xq22.1pa	L1	L1	L1FLnI	chrX	102067978	102077122	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTND6P13	ENSG00000234901	58932	TCEAL2	ENSG00000184905	48557	None	None
L1FLnI_Xq22.1qa	L1	L1	L1FLnI	chrX	102190560	102200700	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TCP11X1	ENSG00000268235	14601	TCP11X3P	ENSG00000251525	5539	None	None
L1FLnI_Xq22.1ra	L1	L1	L1FLnI	chrX	102229980	102240113	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NXF2	ENSG00000269405	7048	TCP11X1	ENSG00000268235	448	None	None
L1FLnI_Xq22.1sa	L1	L1	L1FLnI	chrX	102229996	102240113	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NXF2	ENSG00000269405	7048	TCP11X1	ENSG00000268235	464	None	None
L1FLnI_Xq22.1ta	L1	L1	L1FLnI	chrX	102261397	102269952	+	coding	NXF2,AC234791.1	protein_coding,unprocessed_pseudogene	SENSE,SENSE	ENSG00000269405,ENSG00000273746	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.1ua	L1	L1	L1FLnI	chrX	102274145	102285303	-	coding	NXF2	protein_coding	ANTISENSE	ENSG00000269405	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.1va	L1	L1	L1FLnI	chrX	102274148	102285303	-	coding	NXF2	protein_coding	ANTISENSE	ENSG00000269405	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.1wa	L1	L1	L1FLnI	chrX	102401814	102412971	+	coding	AC235565.2,NXF2B	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000284800,ENSG00000269437	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.1xa	L1	L1	L1FLnI	chrX	102401814	102412968	+	coding	AC235565.2,NXF2B	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000284800,ENSG00000269437	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.1ya	L1	L1	L1FLnI	chrX	102417170	102425725	-	coding	AC235565.2,NXF2B,AC235565.1	protein_coding,protein_coding,unitary_pseudogene	SENSE,SENSE,SENSE	ENSG00000284800,ENSG00000269437,ENSG00000231590	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.1za	L1	L1	L1FLnI	chrX	102446997	102457131	+	coding	AC235565.2,TCP11X2	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000284800,ENSG00000215029	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.1ab	L1	L1	L1FLnI	chrX	102570802	102580948	+	coding	NXF4	transcribed_unprocessed_pseudogene	SENSE	ENSG00000196970	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.1bb	L1	L1	L1FLnI	chrX	102618425	102629533	-	coding	ARMCX5-GPRASP2,AL035427.1	lncRNA,lncRNA	ANTISENSE,SENSE	ENSG00000271147,ENSG00000270050	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.1cb	L1	L1	L1FLnI	chrX	102685398	102695523	-	noncoding	ARMCX5-GPRASP2	lncRNA	ANTISENSE	ENSG00000271147	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.1db	L1	L1	L1FLnI	chrX	102776989	102785666	-	coding	LINC00630	lncRNA	ANTISENSE	ENSG00000223546	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.1eb	L1	L1	L1FLnI	chrX	102790927	102799729	-	noncoding	LINC00630,MTCO1P19,MTCO2P19,MTATP6P19,MTCO3P19	lncRNA,processed_pseudogene,processed_pseudogene,processed_pseudogene,processed_pseudogene	ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE,ANTISENSE	ENSG00000223546,ENSG00000237300,ENSG00000237628,ENSG00000228316,ENSG00000224471	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrX:102798233-102798239
L1FLnI_Xq22.1fb	L1	L1	L1FLnI	chrX	102870678	102880821	-	coding	LINC00630	lncRNA	ANTISENSE	ENSG00000223546	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.1gb	L1	L1	L1FLnI	chrX	103019961	103030116	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	BEX1	ENSG00000133169	32535	Z73361.1	ENSG00000224632	11889	None	None
L1FLnI_Xq22.1hb	L1	L1	L1FLnI	chrX	103127909	103138043	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	NXF3	ENSG00000147206	34766	RPSAP59	ENSG00000233071	67967	None	None
L1FLnI_Xq22.1ib	L1	L1	L1FLnI	chrX	103279000	103289147	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TCEAL5	ENSG00000204065	2250	BEX2	ENSG00000133134	20199	None	None
L1FLnI_Xq22.2a	L1	L1	L1FLnI	chrX	103454046	103464171	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	Z69733.1	ENSG00000234405	22290	AL117327.1	ENSG00000281091	1292	None	None
L1FLnI_Xq22.2b	L1	L1	L1FLnI	chrX	103864208	103873898	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP511	ENSG00000222419	13297	TMSB15B-AS1	ENSG00000231728	6770	chrX:103865104-103865284	None
L1ORF2_Xq22.2	L1	L1	L1ORF2	chrX	103890494	103898539	-	coding	TMSB15B-AS1	lncRNA	SENSE	ENSG00000231728	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.2c	L1	L1	L1FLnI	chrX	103935646	103944667	-	noncoding	TMSB15B	protein_coding	ANTISENSE	ENSG00000158427	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.2d	L1	L1	L1FLnI	chrX	103935646	103944210	-	noncoding	TMSB15B	protein_coding	ANTISENSE	ENSG00000158427	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.2e	L1	L1	L1FLnI	chrX	103949428	103960738	+	noncoding	TMSB15B	protein_coding	SENSE	ENSG00000158427	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.2f	L1	L1	L1FLnI	chrX	103949428	103958338	+	noncoding	TMSB15B	protein_coding	SENSE	ENSG00000158427	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.2g	L1	L1	L1FLnI	chrX	104026373	104036402	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	H2BW2	ENSG00000101812	3547	H2BW1	ENSG00000123569	12686	None	None
L1FLnI_Xq22.2h	L1	L1	L1FLnI	chrX	104078126	104090120	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC25A53	ENSG00000269743	9094	TMSB15B	ENSG00000269226	1914	None	None
L1FLnI_Xq22.2i	L1	L1	L1FLnI	chrX	104080526	104090120	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLC25A53	ENSG00000269743	9094	TMSB15B	ENSG00000269226	4314	None	None
L1FLnI_Xq22.2j	L1	L1	L1FLnI	chrX	104360141	104370287	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	IL1RAPL2	ENSG00000189108	195912	ESX1	ENSG00000123576	105208	None	None
L1FLnI_Xq22.2k	L1	L1	L1FLnI	chrX	104403931	104412866	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	IL1RAPL2	ENSG00000189108	153333	ESX1	ENSG00000123576	148998	None	None
L1FLnI_Xq22.3a	L1	L1	L1FLnI	chrX	104598539	104608848	+	noncoding	IL1RAPL2	protein_coding	SENSE	ENSG00000189108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3b	L1	L1	L1FLnI	chrX	104630342	104640489	-	coding	IL1RAPL2	protein_coding	ANTISENSE	ENSG00000189108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3c	L1	L1	L1FLnI	chrX	104671601	104681622	-	coding	IL1RAPL2	protein_coding	ANTISENSE	ENSG00000189108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3d	L1	L1	L1FLnI	chrX	104889306	104899434	-	noncoding	IL1RAPL2	protein_coding	ANTISENSE	ENSG00000189108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3e	L1	L1	L1FLnI	chrX	104903803	104913878	-	coding	IL1RAPL2	protein_coding	ANTISENSE	ENSG00000189108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3f	L1	L1	L1FLnI	chrX	104903803	104913335	-	coding	IL1RAPL2	protein_coding	ANTISENSE	ENSG00000189108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3g	L1	L1	L1FLnI	chrX	105028755	105038891	-	coding	IL1RAPL2	protein_coding	ANTISENSE	ENSG00000189108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3h	L1	L1	L1FLnI	chrX	105072547	105082649	-	coding	IL1RAPL2	protein_coding	ANTISENSE	ENSG00000189108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3i	L1	L1	L1FLnI	chrX	105208178	105218611	+	noncoding	IL1RAPL2	protein_coding	SENSE	ENSG00000189108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3j	L1	L1	L1FLnI	chrX	105256130	105264932	-	noncoding	IL1RAPL2	protein_coding	ANTISENSE	ENSG00000189108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3k	L1	L1	L1FLnI	chrX	105587889	105597403	-	noncoding	IL1RAPL2	protein_coding	ANTISENSE	ENSG00000189108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3l	L1	L1	L1FLnI	chrX	105598841	105607678	+	noncoding	IL1RAPL2	protein_coding	SENSE	ENSG00000189108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chrX:105602209-105602303	chrX:105607631-105607636
L1FLnI_Xq22.3m	L1	L1	L1FLnI	chrX	105680564	105690725	+	coding	IL1RAPL2	protein_coding	SENSE	ENSG00000189108	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3n	L1	L1	L1FLnI	chrX	105793408	105803423	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	IL1RAPL2	ENSG00000189108	25579	NRK	ENSG00000123572	19116	None	None
L1FLnI_Xq22.3o	L1	L1	L1FLnI	chrX	105924818	105935301	-	noncoding	NRK	protein_coding	ANTISENSE	ENSG00000123572	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3p	L1	L1	L1FLnI	chrX	105956188	105966237	+	coding	NRK	protein_coding	SENSE	ENSG00000123572	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3q	L1	L1	L1FLnI	chrX	106134804	106144726	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512661.1	ENSG00000230788	61602	PWWP3B	ENSG00000157502	23579	None	None
L1FLnI_Xq22.3r	L1	L1	L1FLnI	chrX	106135383	106144726	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512661.1	ENSG00000230788	62181	PWWP3B	ENSG00000157502	23579	None	None
L1FLnI_Xq22.3s	L1	L1	L1FLnI	chrX	106189417	106198582	-	coding	PWWP3B	protein_coding	ANTISENSE	ENSG00000157502	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3t	L1	L1	L1FLnI	chrX	106358207	106367705	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL139812.1	ENSG00000202407	58863	AL133271.1	ENSG00000256709	30383	None	None
L1FLnI_Xq22.3u	L1	L1	L1FLnI	chrX	106403546	106413662	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL133271.1	ENSG00000256709	75722	AL139812.1	ENSG00000202407	12906	None	None
L1FLnI_Xq22.3v	L1	L1	L1FLnI	chrX	106465787	106475819	+	coding	NAP1L4P2	processed_pseudogene	ANTISENSE	ENSG00000224816	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3w	L1	L1	L1FLnI	chrX	106572641	106582790	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RADX	ENSG00000147231	29140	AL590808.1	ENSG00000277673	6480	None	None
L1FLnI_Xq22.3x	L1	L1	L1FLnI	chrX	106678952	106690542	+	noncoding	RADX	protein_coding	SENSE	ENSG00000147231	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3y	L1	L1	L1FLnI	chrX	106765221	106775370	-	coding	RNF128	protein_coding	ANTISENSE	ENSG00000133135	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3z	L1	L1	L1FLnI	chrX	106858073	106868000	-	noncoding	TBC1D8B,MORC4	protein_coding,protein_coding	ANTISENSE,SENSE	ENSG00000133138,ENSG00000133131	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3aa	L1	L1	L1FLnI	chrX	106962826	106972971	+	coding	MORC4	protein_coding	ANTISENSE	ENSG00000133131	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3ba	L1	L1	L1FLnI	chrX	107152269	107162285	+	coding	NUP62CL	protein_coding	ANTISENSE	ENSG00000198088	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3ca	L1	L1	L1FLnI	chrX	107152269	107162283	+	coding	NUP62CL	protein_coding	ANTISENSE	ENSG00000198088	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3da	L1	L1	L1FLnI	chrX	107360838	107370865	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	DNAJA1P3	ENSG00000215007	7995	KRT18P49	ENSG00000214720	57765	None	None
L1FLnI_Xq22.3ea	L1	L1	L1FLnI	chrX	107360838	107370849	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	DNAJA1P3	ENSG00000215007	7995	KRT18P49	ENSG00000214720	57781	None	None
L1FLnI_Xq22.3fa	L1	L1	L1FLnI	chrX	107419341	107428356	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	DNAJA1P3	ENSG00000215007	66498	KRT18P49	ENSG00000214720	274	None	None
L1FLnI_Xq22.3ga	L1	L1	L1FLnI	chrX	107884604	107894764	-	coding	MID2,AL109946.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000080561,ENSG00000236064	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3ha	L1	L1	L1FLnI	chrX	107884623	107894764	-	coding	MID2,AL109946.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000080561,ENSG00000236064	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3ia	L1	L1	L1FLnI	chrX	107943066	107953181	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	NLRP3P1	ENSG00000277883	20897	AL034399.2	ENSG00000225728	3424	None	None
L1FLnI_Xq22.3ja	L1	L1	L1FLnI	chrX	107985579	107995097	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	VSIG1	ENSG00000101842	49873	NLRP3P1	ENSG00000277883	571	None	None
L1FLnI_Xq22.3ka	L1	L1	L1FLnI	chrX	108273517	108283657	+	coding	COL4A6	protein_coding	ANTISENSE	ENSG00000197565	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3la	L1	L1	L1FLnI	chrX	108385220	108395464	-	coding	COL4A6	protein_coding	SENSE	ENSG00000197565	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3ma	L1	L1	L1FLnI	chrX	108541611	108551755	-	coding	COL4A5	protein_coding	ANTISENSE	ENSG00000188153	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3na	L1	L1	L1FLnI	chrX	108655521	108664314	-	noncoding	COL4A5	protein_coding	ANTISENSE	ENSG00000188153	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3oa	L1	L1	L1FLnI	chrX	108818741	108829169	-	noncoding	RNU6-309P	snRNA	ANTISENSE	ENSG00000201443	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq22.3pa	L1	L1	L1FLnI	chrX	108900395	108909930	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-309P	ENSG00000201443	73526	AL928646.1	ENSG00000275110	144612	None	None
L1FLnI_Xq22.3qa	L1	L1	L1FLnI	chrX	108938675	108948319	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL928646.1	ENSG00000275110	106223	RNU6-309P	ENSG00000201443	111806	None	None
L1FLnI_Xq22.3ra	L1	L1	L1FLnI	chrX	109006905	109016066	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-309P	ENSG00000201443	180036	AL928646.1	ENSG00000275110	38476	None	None
L1FLnI_Xq22.3sa	L1	L1	L1FLnI	chrX	109018831	109028969	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL928646.1	ENSG00000275110	25573	RNU6-309P	ENSG00000201443	191962	None	None
L1FLnI_Xq22.3ta	L1	L1	L1FLnI	chrX	109066149	109076237	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL034403.1	ENSG00000215000	265576	AL928646.1	ENSG00000275110	11559	None	None
L1FLnI_Xq22.3ua	L1	L1	L1FLnI	chrX	109082838	109093221	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL034403.1	ENSG00000215000	248592	AL928646.1	ENSG00000275110	28248	None	None
L1FLnI_Xq22.3va	L1	L1	L1FLnI	chrX	109095891	109107525	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL034403.1	ENSG00000215000	234288	AL928646.1	ENSG00000275110	41301	None	None
L1FLnI_Xq22.3wa	L1	L1	L1FLnI	chrX	109109809	109119833	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL928646.1	ENSG00000275110	55219	AL034403.1	ENSG00000215000	221980	None	None
L1FLnI_Xq22.3xa	L1	L1	L1FLnI	chrX	109163159	109171897	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL034403.1	ENSG00000215000	169916	AL928646.1	ENSG00000275110	108569	None	None
L1FLnI_Xq22.3ya	L1	L1	L1FLnI	chrX	109188217	109198626	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL928646.1	ENSG00000275110	133627	AL034403.1	ENSG00000215000	143187	None	None
L1FLnI_Xq22.3za	L1	L1	L1FLnI	chrX	109203689	109212855	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL034403.1	ENSG00000215000	128958	AL928646.1	ENSG00000275110	149099	None	None
L1FLnI_Xq22.3ab	L1	L1	L1FLnI	chrX	109242496	109252665	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL034403.1	ENSG00000215000	89148	AL928646.1	ENSG00000275110	187906	None	None
L1FLnI_Xq22.3bb	L1	L1	L1FLnI	chrX	109257336	109268906	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL034403.1	ENSG00000215000	72907	AL928646.1	ENSG00000275110	202746	None	None
L1FLnI_Xq22.3cb	L1	L1	L1FLnI	chrX	109287495	109296814	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL034403.1	ENSG00000215000	44999	AL928646.1	ENSG00000275110	232905	None	None
L1FLnI_Xq22.3db	L1	L1	L1FLnI	chrX	109287565	109296814	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL034403.1	ENSG00000215000	44999	AL928646.1	ENSG00000275110	232975	None	None
L1FLnI_Xq22.3eb	L1	L1	L1FLnI	chrX	109314381	109323240	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL034403.1	ENSG00000215000	18573	AL928646.1	ENSG00000275110	259791	None	None
L1FLnI_Xq22.3fb	L1	L1	L1FLnI	chrX	109329317	109339469	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL034403.1	ENSG00000215000	2344	AL928646.1	ENSG00000275110	274727	None	None
L1FLnI_Xq23a	L1	L1	L1FLnI	chrX	109504914	109513414	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GUCY2F	ENSG00000101890	22828	NXT2	ENSG00000101888	22367	None	None
L1FLnI_Xq23b	L1	L1	L1FLnI	chrX	109516977	109526256	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GUCY2F	ENSG00000101890	34891	NXT2	ENSG00000101888	9525	None	None
L1FLnI_Xq23c	L1	L1	L1FLnI	chrX	109600303	109610051	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL118496.1	ENSG00000233874	30014	KCNE5	ENSG00000176076	13649	None	None
L1FLnI_Xq23d	L1	L1	L1FLnI	chrX	109641168	109651192	+	coding	ACSL4	protein_coding	ANTISENSE	ENSG00000068366	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	chrX:109642134-109642173,chrX:109643564-109643576
L1FLnI_Xq23e	L1	L1	L1FLnI	chrX	109894955	109905128	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM164	ENSG00000157600	97503	RPS5P7	ENSG00000225381	41036	None	None
L1FLnI_Xq23f	L1	L1	L1FLnI	chrX	109894964	109905128	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM164	ENSG00000157600	97503	RPS5P7	ENSG00000225381	41045	None	None
L1FLnI_Xq23g	L1	L1	L1FLnI	chrX	110090211	110100313	-	coding	TMEM164	protein_coding	ANTISENSE	ENSG00000157600	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq23h	L1	L1	L1FLnI	chrX	110543323	110552306	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC000113.1	ENSG00000287685	19003	AL512882.1	ENSG00000228042	84535	None	None
L1FLnI_Xq23i	L1	L1	L1FLnI	chrX	110602330	110612351	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC000113.1	ENSG00000287685	78010	AL512882.1	ENSG00000228042	24490	None	None
L1FLnI_Xq23j	L1	L1	L1FLnI	chrX	110602330	110612368	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC000113.1	ENSG00000287685	78010	AL512882.1	ENSG00000228042	24473	None	None
L1FLnI_Xq23k	L1	L1	L1FLnI	chrX	110615911	110625180	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512882.1	ENSG00000228042	11661	AC000113.1	ENSG00000287685	91591	None	None
L1FLnI_Xq23l	L1	L1	L1FLnI	chrX	110622510	110632967	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC000113.1	ENSG00000287685	98190	AL512882.1	ENSG00000228042	3874	None	None
L1FLnI_Xq23m	L1	L1	L1FLnI	chrX	110639510	110649663	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	CHRDL1	ENSG00000101938	24193	AL512882.1	ENSG00000228042	1838	None	None
L1FLnI_Xq23n	L1	L1	L1FLnI	chrX	110653405	110663549	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL512882.1	ENSG00000228042	15733	CHRDL1	ENSG00000101938	10307	None	None
L1FLnI_Xq23o	L1	L1	L1FLnI	chrX	110816255	110826273	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PAK3	ENSG00000077264	118012	CHRDL1	ENSG00000101938	20436	None	None
L1FLnI_Xq23p	L1	L1	L1FLnI	chrX	110816266	110826273	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PAK3	ENSG00000077264	118012	CHRDL1	ENSG00000101938	20447	None	None
L1FLnI_Xq23q	L1	L1	L1FLnI	chrX	110897896	110907967	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PAK3	ENSG00000077264	36318	CHRDL1	ENSG00000101938	102077	None	None
L1FLnI_Xq23r	L1	L1	L1FLnI	chrX	111588206	111598227	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL589880.1	ENSG00000229939	20581	SERTM2	ENSG00000260802	65807	None	None
L1FLnI_Xq23s	L1	L1	L1FLnI	chrX	111588212	111598227	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL589880.1	ENSG00000229939	20581	SERTM2	ENSG00000260802	65813	None	None
L1FLnI_Xq23t	L1	L1	L1FLnI	chrX	111780954	111791069	+	coding	TRPC5	protein_coding	ANTISENSE	ENSG00000072315	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq23u	L1	L1	L1FLnI	chrX	111959340	111969489	+	coding	TRPC5	protein_coding	ANTISENSE	ENSG00000072315	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq23v	L1	L1	L1FLnI	chrX	111992413	112001662	-	coding	TRPC5	protein_coding	SENSE	ENSG00000072315	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq23w	L1	L1	L1FLnI	chrX	112240178	112250353	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	DPRXP7	ENSG00000271464	69599	TRPC5	ENSG00000072315	157402	None	None
L1FLnI_Xq23x	L1	L1	L1FLnI	chrX	112322647	112332660	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	DPRXP7	ENSG00000271464	2230	AL392112.1	ENSG00000271400	48732	None	None
L1FLnI_Xq23y	L1	L1	L1FLnI	chrX	112458312	112468473	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RTL4	ENSG00000187823	1200	LHFPL1	ENSG00000182508	162175	None	None
L1FLnI_Xq23z	L1	L1	L1FLnI	chrX	112498541	112508565	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RTL4	ENSG00000187823	41429	LHFPL1	ENSG00000182508	122083	None	None
L1FLnI_Xq23aa	L1	L1	L1FLnI	chrX	112545305	112555394	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	LHFPL1	ENSG00000182508	75254	RTL4	ENSG00000187823	88193	None	None
L1FLnI_Xq23ba	L1	L1	L1FLnI	chrX	112552122	112562108	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RTL4	ENSG00000187823	95010	LHFPL1	ENSG00000182508	68540	None	None
L1FLnI_Xq23ca	L1	L1	L1FLnI	chrX	112586625	112596780	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RTL4	ENSG00000187823	129513	LHFPL1	ENSG00000182508	33868	None	None
L1FLnI_Xq23da	L1	L1	L1FLnI	chrX	112586625	112596771	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RTL4	ENSG00000187823	129513	LHFPL1	ENSG00000182508	33877	None	None
L1FLnI_Xq23ea	L1	L1	L1FLnI	chrX	112715111	112725137	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P30	ENSG00000213652	24591	AMOT	ENSG00000126016	49366	None	None
L1FLnI_Xq23fa	L1	L1	L1FLnI	chrX	112715111	112725127	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HMGB3P30	ENSG00000213652	24591	AMOT	ENSG00000126016	49376	None	None
L1FLnI_Xq23ga	L1	L1	L1FLnI	chrX	113084050	113094187	+	noncoding	AC002072.1	lncRNA	SENSE	ENSG00000286072	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq23ha	L1	L1	L1FLnI	chrX	113084050	113094177	+	noncoding	AC002072.1	lncRNA	SENSE	ENSG00000286072	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq23ia	L1	L1	L1FLnI	chrX	113153241	113162213	-	noncoding	AC002072.1,AL023877.1	lncRNA,lncRNA	ANTISENSE,ANTISENSE	ENSG00000286072,ENSG00000286767	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq23ja	L1	L1	L1FLnI	chrX	113196651	113206887	-	noncoding	AC002072.1	lncRNA	ANTISENSE	ENSG00000286072	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq23ka	L1	L1	L1FLnI	chrX	113206133	113216167	-	coding	AC002072.1	lncRNA	ANTISENSE	ENSG00000286072	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq23la	L1	L1	L1FLnI	chrX	113337324	113347353	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL031183.1	ENSG00000235329	60	AC002072.1	ENSG00000286072	125138	None	None
L1FLnI_Xq23ma	L1	L1	L1FLnI	chrX	113384903	113396471	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC233289.1	ENSG00000220541	126011	AL031183.1	ENSG00000235329	37284	None	None
L1FLnI_Xq23na	L1	L1	L1FLnI	chrX	113411280	113419962	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL031183.1	ENSG00000235329	63661	AC233289.1	ENSG00000220541	102520	None	None
L1FLnI_Xq23oa	L1	L1	L1FLnI	chrX	113442556	113451961	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL031183.1	ENSG00000235329	94937	AC233289.1	ENSG00000220541	70521	None	None
L1FLnI_Xq23pa	L1	L1	L1FLnI	chrX	113475773	113485906	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL031183.1	ENSG00000235329	128154	AC233289.1	ENSG00000220541	36576	None	None
L1FLnI_Xq23qa	L1	L1	L1FLnI	chrX	113691448	113701865	-	noncoding	XACT	lncRNA	SENSE	ENSG00000241743	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq23ra	L1	L1	L1FLnI	chrX	113731400	113739984	-	coding	XACT	lncRNA	SENSE	ENSG00000241743	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq23sa	L1	L1	L1FLnI	chrX	114121442	114131758	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL953862.1	ENSG00000230502	257230	XACT	ENSG00000241743	62153	None	None
L1FLnI_Xq23ta	L1	L1	L1FLnI	chrX	114179686	114189500	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	XACT	ENSG00000241743	120397	AL953862.1	ENSG00000230502	199488	None	None
L1FLnI_Xq23ua	L1	L1	L1FLnI	chrX	114697078	114707220	+	coding	HTR2C	protein_coding	SENSE	ENSG00000147246	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq23va	L1	L1	L1FLnI	chrX	114720018	114730031	-	coding	HTR2C	protein_coding	ANTISENSE	ENSG00000147246	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq23wa	L1	L1	L1FLnI	chrX	114830199	114840232	-	coding	HTR2C	protein_coding	ANTISENSE	ENSG00000147246	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq23xa	L1	L1	L1FLnI	chrX	114938287	114947133	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	IL13RA2	ENSG00000123496	56842	HTR2C	ENSG00000147246	28226	None	None
L1FLnI_Xq23ya	L1	L1	L1FLnI	chrX	115079938	115090111	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LRCH2	ENSG00000130224	20505	YAP1P2	ENSG00000236080	10092	None	None
L1FLnI_Xq23za	L1	L1	L1FLnI	chrX	115096145	115104878	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	YAP1P2	ENSG00000236080	26299	LRCH2	ENSG00000130224	5738	None	None
L1FLnI_Xq23ab	L1	L1	L1FLnI	chrX	115930595	115939982	-	noncoding	DANT2	lncRNA	SENSE	ENSG00000235244	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq23bb	L1	L1	L1FLnI	chrX	115956549	115967266	+	noncoding	DANT2	lncRNA	ANTISENSE	ENSG00000235244	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq23cb	L1	L1	L1FLnI	chrX	116046402	116056419	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	API5P1	ENSG00000234558	50502	AKR1B1P8	ENSG00000231371	1984	None	None
L1FLnI_Xq23db	L1	L1	L1FLnI	chrX	116063405	116071983	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	API5P1	ENSG00000234558	34938	AKR1B1P8	ENSG00000231371	18987	None	None
L1FLnI_Xq23eb	L1	L1	L1FLnI	chrX	116117703	116127838	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	API5P1	ENSG00000234558	9273	AGTR2	ENSG00000180772	42906	None	None
L1FLnI_Xq23fb	L1	L1	L1FLnI	chrX	116155703	116165853	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	API5P1	ENSG00000234558	47273	AGTR2	ENSG00000180772	4891	None	None
L1FLnI_Xq23gb	L1	L1	L1FLnI	chrX	116155703	116165840	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	API5P1	ENSG00000234558	47273	AGTR2	ENSG00000180772	4904	None	None
L1FLnI_Xq23hb	L1	L1	L1FLnI	chrX	116302031	116311336	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-154P	ENSG00000207033	89512	AGTR2	ENSG00000180772	127057	None	None
L1FLnI_Xq23ib	L1	L1	L1FLnI	chrX	116514116	116524129	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	BX119904.3	ENSG00000236077	145681	CT83	ENSG00000204019	51140	None	None
L1FLnI_Xq23jb	L1	L1	L1FLnI	chrX	116540005	116550497	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX119904.3	ENSG00000236077	119313	CT83	ENSG00000204019	77029	None	None
L1FLnI_Xq23kb	L1	L1	L1FLnI	chrX	116701479	116710154	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	BX119904.1	ENSG00000224217	38376	BX119904.2	ENSG00000230159	7291	None	None
L1FLnI_Xq23lb	L1	L1	L1FLnI	chrX	116799262	116810595	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1323P	ENSG00000206752	40244	BX119904.1	ENSG00000224217	50385	None	None
L1FLnI_Xq23mb	L1	L1	L1FLnI	chrX	116858266	116867282	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SETP8	ENSG00000213526	95767	RNU6-1323P	ENSG00000206752	7321	None	None
L1FLnI_Xq23nb	L1	L1	L1FLnI	chrX	116876431	116887169	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SETP8	ENSG00000213526	75880	RNU6-1323P	ENSG00000206752	25486	None	None
L1FLnI_Xq23ob	L1	L1	L1FLnI	chrX	116940814	116950786	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SETP8	ENSG00000213526	12263	RNU6-1323P	ENSG00000206752	89869	None	None
L1FLnI_Xq23pb	L1	L1	L1FLnI	chrX	116964333	116974335	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC005002.2	ENSG00000238066	423603	SETP8	ENSG00000213526	657	None	None
L1FLnI_Xq23qb	L1	L1	L1FLnI	chrX	117043676	117052198	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SETP8	ENSG00000213526	80000	AC005002.2	ENSG00000238066	345740	None	None
L1FLnI_Xq23rb	L1	L1	L1FLnI	chrX	117257193	117267321	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SETP8	ENSG00000213526	293517	AC005002.2	ENSG00000238066	130617	None	None
L1FLnI_Xq23sb	L1	L1	L1FLnI	chrX	117264568	117274993	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SETP8	ENSG00000213526	300892	AC005002.2	ENSG00000238066	122945	None	None
L1FLnI_Xq23tb	L1	L1	L1FLnI	chrX	117351959	117361345	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005002.2	ENSG00000238066	36593	SETP8	ENSG00000213526	388283	None	None
L1FLnI_Xq24a	L1	L1	L1FLnI	chrX	117405027	117415674	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005002.1	ENSG00000224314	4946	AC006963.2	ENSG00000279587	478958	None	None
L1FLnI_Xq24b	L1	L1	L1FLnI	chrX	117439656	117450074	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005002.1	ENSG00000224314	39575	AC006963.2	ENSG00000279587	444558	None	None
L1FLnI_Xq24c	L1	L1	L1FLnI	chrX	117461714	117471017	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006963.2	ENSG00000279587	423615	AC005002.1	ENSG00000224314	61633	None	None
L1FLnI_Xq24d	L1	L1	L1FLnI	chrX	117552193	117562295	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC005002.1	ENSG00000224314	152112	AC006963.2	ENSG00000279587	332337	None	None
L1FLnI_Xq24e	L1	L1	L1FLnI	chrX	117577768	117586337	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006963.2	ENSG00000279587	308295	AC005002.1	ENSG00000224314	177687	None	None
L1FLnI_Xq24f	L1	L1	L1FLnI	chrX	117585781	117595275	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC005002.1	ENSG00000224314	185700	AC006963.2	ENSG00000279587	299357	None	None
L1FLnI_Xq24g	L1	L1	L1FLnI	chrX	117691288	117702845	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC005002.1	ENSG00000224314	291207	AC006963.2	ENSG00000279587	191787	None	None
L1FLnI_Xq24h	L1	L1	L1FLnI	chrX	117727435	117737246	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC006963.2	ENSG00000279587	157386	AC005002.1	ENSG00000224314	327354	None	None
L1FLnI_Xq24i	L1	L1	L1FLnI	chrX	117756681	117766831	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC006963.2	ENSG00000279587	127801	AC005002.1	ENSG00000224314	356600	None	None
L1FLnI_Xq24j	L1	L1	L1FLnI	chrX	117826948	117837092	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC006963.2	ENSG00000279587	57540	AC005002.1	ENSG00000224314	426867	None	None
L1FLnI_Xq24k	L1	L1	L1FLnI	chrX	117873498	117883523	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC006963.2	ENSG00000279587	11109	AC005002.1	ENSG00000224314	473417	None	None
L1FLnI_Xq24l	L1	L1	L1FLnI	chrX	117938444	117947658	-	coding	KLHL13	protein_coding	SENSE	ENSG00000003096	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq24m	L1	L1	L1FLnI	chrX	118028231	118038257	+	coding	KLHL13	protein_coding	ANTISENSE	ENSG00000003096	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq24n	L1	L1	L1FLnI	chrX	118090389	118099619	+	coding	KLHL13	protein_coding	ANTISENSE	ENSG00000003096	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq24o	L1	L1	L1FLnI	chrX	118238208	118248365	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL12P43	ENSG00000234524	91647	AL391358.1	ENSG00000270619	29794	chrX:118240719-118241107	None
L1FLnI_Xq24p	L1	L1	L1FLnI	chrX	119434970	119444993	-	coding	SLC25A43	protein_coding	ANTISENSE	ENSG00000077713	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq24q	L1	L1	L1FLnI	chrX	120045905	120056018	-	coding	RHOXF1-AS1	lncRNA	ANTISENSE	ENSG00000258545	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq24r	L1	L1	L1FLnI	chrX	120180335	120190462	+	coding	NKAPP1	transcribed_processed_pseudogene	ANTISENSE	ENSG00000233382	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq24s	L1	L1	L1FLnI	chrX	120340737	120350908	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM255A	ENSG00000125355	29181	ATP1B4	ENSG00000101892	11177	None	None
L1FLnI_Xq24t	L1	L1	L1FLnI	chrX	120384755	120394708	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	LAMP2	ENSG00000005893	31440	ATP1B4	ENSG00000101892	1506	None	None
L1FLnI_Xq24u	L1	L1	L1FLnI	chrX	120590654	120599361	+	noncoding	MCTS1	protein_coding	SENSE	ENSG00000232119	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq24v	L1	L1	L1FLnI	chrX	120694584	120703388	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C1GALT1C1	ENSG00000171155	64530	H3P46	ENSG00000278317	5673	None	None
L1FLnI_Xq24w	L1	L1	L1FLnI	chrX	120826646	120837023	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PA2G4P1	ENSG00000237828	31588	AC011890.1	ENSG00000181511	93250	None	None
L1FLnI_Xq24x	L1	L1	L1FLnI	chrX	121530700	121540861	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	TPT1P13	ENSG00000213498	322837	MIR3672	ENSG00000265456	159647	None	None
L1FLnI_Xq24y	L1	L1	L1FLnI	chrX	121547823	121557715	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR3672	ENSG00000265456	176770	TPT1P13	ENSG00000213498	305983	None	None
L1FLnI_Xq24z	L1	L1	L1FLnI	chrX	121796673	121807118	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TPT1P13	ENSG00000213498	56580	MIR3672	ENSG00000265456	425620	None	None
L1FLnI_Xq24aa	L1	L1	L1FLnI	chrX	121796673	121805342	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TPT1P13	ENSG00000213498	58356	MIR3672	ENSG00000265456	425620	None	None
L1FLnI_Xq25a	L1	L1	L1FLnI	chrX	121803122	121812960	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TPT1P13	ENSG00000213498	50738	MIR3672	ENSG00000265456	432069	None	None
L1FLnI_Xq25b	L1	L1	L1FLnI	chrX	121873858	121884020	+	coding	AL359851.1	lncRNA	SENSE	ENSG00000260585	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25c	L1	L1	L1FLnI	chrX	122036165	122046610	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL357562.1	ENSG00000280142	195398	AL441985.1	ENSG00000237891	24553	None	None
L1FLnI_Xq25d	L1	L1	L1FLnI	chrX	122136502	122146689	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL441985.1	ENSG00000237891	124890	AL357562.1	ENSG00000280142	95319	None	None
L1FLnI_Xq25e	L1	L1	L1FLnI	chrX	122259751	122271462	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL513487.1	ENSG00000287776	150544	AL357562.1	ENSG00000280142	17135	None	None
L1FLnI_Xq25f	L1	L1	L1FLnI	chrX	122357377	122369178	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL513487.1	ENSG00000287776	52828	AL357562.1	ENSG00000280142	114761	None	None
L1FLnI_Xq25g	L1	L1	L1FLnI	chrX	122521758	122530736	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL513487.1	ENSG00000287776	43715	RPL3P12	ENSG00000232496	7517	None	None
L1FLnI_Xq25h	L1	L1	L1FLnI	chrX	122600117	122609560	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL3P12	ENSG00000232496	60657	AL670318.1	ENSG00000212321	230866	None	None
L1FLnI_Xq25i	L1	L1	L1FLnI	chrX	122615377	122624937	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL670318.1	ENSG00000212321	215489	RPL3P12	ENSG00000232496	75917	None	None
L1FLnI_Xq25j	L1	L1	L1FLnI	chrX	122615377	122624960	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL670318.1	ENSG00000212321	215466	RPL3P12	ENSG00000232496	75917	None	None
L1FLnI_Xq25k	L1	L1	L1FLnI	chrX	122630167	122641194	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL670318.1	ENSG00000212321	199232	RPL3P12	ENSG00000232496	90707	None	None
L1FLnI_Xq25l	L1	L1	L1FLnI	chrX	122669787	122679167	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL3P12	ENSG00000232496	130327	AL670318.1	ENSG00000212321	161259	None	None
L1FLnI_Xq25m	L1	L1	L1FLnI	chrX	122760304	122769758	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RPL3P12	ENSG00000232496	220844	AL670318.1	ENSG00000212321	70668	None	None
L1FLnI_Xq25n	L1	L1	L1FLnI	chrX	122877422	122886787	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL670318.1	ENSG00000212321	36777	MRRFP1	ENSG00000224236	229320	None	None
L1FLnI_Xq25o	L1	L1	L1FLnI	chrX	123117669	123128410	+	noncoding	MRRFP1	processed_pseudogene	ANTISENSE	ENSG00000224236	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrX:123117802-123117814
L1FLnI_Xq25p	L1	L1	L1FLnI	chrX	123279445	123289928	+	noncoding	GRIA3	protein_coding	SENSE	ENSG00000125675	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25q	L1	L1	L1FLnI	chrX	123644507	123654916	+	noncoding	THOC2	protein_coding	ANTISENSE	ENSG00000125676	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25r	L1	L1	L1FLnI	chrX	124103927	124114035	-	coding	STAG2	protein_coding	ANTISENSE	ENSG00000101972	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25s	L1	L1	L1FLnI	chrX	124579072	124589202	+	coding	TENM1	protein_coding	ANTISENSE	ENSG00000009694	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25t	L1	L1	L1FLnI	chrX	124750995	124761142	-	coding	TENM1	protein_coding	SENSE	ENSG00000009694	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25u	L1	L1	L1FLnI	chrX	124858697	124869442	+	noncoding	TENM1	protein_coding	ANTISENSE	ENSG00000009694	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25v	L1	L1	L1FLnI	chrX	125002085	125011032	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TENM1	ENSG00000009694	38268	AL008707.1	ENSG00000232599	192773	None	None
L1FLnI_Xq25w	L1	L1	L1FLnI	chrX	125440793	125451234	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL627231.1	ENSG00000213489	112772	AL645820.1	ENSG00000280223	553212	None	None
L1ORF2_Xq25a	L1	L1	L1ORF2	chrX	125509349	125517395	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL645820.1	ENSG00000280223	487051	AL627231.1	ENSG00000213489	181328	None	None
L1FLnI_Xq25x	L1	L1	L1FLnI	chrX	125532134	125542295	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL627231.1	ENSG00000213489	204113	AL645820.1	ENSG00000280223	462151	None	None
L1FLnI_Xq25y	L1	L1	L1FLnI	chrX	125532134	125542284	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL627231.1	ENSG00000213489	204113	AL645820.1	ENSG00000280223	462162	None	None
L1FLnI_Xq25z	L1	L1	L1FLnI	chrX	125608457	125618469	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL645820.1	ENSG00000280223	385977	AL627231.1	ENSG00000213489	280436	None	None
L1FLnI_Xq25aa	L1	L1	L1FLnI	chrX	125616725	125626000	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645820.1	ENSG00000280223	378446	AL627231.1	ENSG00000213489	288704	None	None
L1FLnI_Xq25ba	L1	L1	L1FLnI	chrX	125623217	125634962	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL627231.1	ENSG00000213489	295196	AL645820.1	ENSG00000280223	369484	None	None
L1FLnI_Xq25ca	L1	L1	L1FLnI	chrX	125625550	125634962	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL627231.1	ENSG00000213489	297529	AL645820.1	ENSG00000280223	369484	None	None
L1FLnI_Xq25da	L1	L1	L1FLnI	chrX	125659683	125670195	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL627231.1	ENSG00000213489	331662	AL645820.1	ENSG00000280223	334251	None	None
L1FLnI_Xq25ea	L1	L1	L1FLnI	chrX	125699527	125709476	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645820.1	ENSG00000280223	294970	AL627231.1	ENSG00000213489	371506	None	None
L1FLnI_Xq25fa	L1	L1	L1FLnI	chrX	125732604	125741333	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645820.1	ENSG00000280223	263113	AL627231.1	ENSG00000213489	404583	None	None
L1FLnI_Xq25ga	L1	L1	L1FLnI	chrX	125835362	125845512	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL627231.1	ENSG00000213489	507341	AL645820.1	ENSG00000280223	158934	None	None
L1FLnI_Xq25ha	L1	L1	L1FLnI	chrX	125889115	125897732	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645820.1	ENSG00000280223	106714	AL627231.1	ENSG00000213489	561094	None	None
L1FLnI_Xq25ia	L1	L1	L1FLnI	chrX	125916852	125927294	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL645820.1	ENSG00000280223	77152	AL627231.1	ENSG00000213489	588831	None	None
L1FLnI_Xq25ja	L1	L1	L1FLnI	chrX	126001420	126013583	+	noncoding	AL645820.1	TEC	ANTISENSE	ENSG00000280223	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25ka	L1	L1	L1FLnI	chrX	126103626	126113637	-	coding	AL445072.1	lncRNA	ANTISENSE	ENSG00000237208	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25la	L1	L1	L1FLnI	chrX	126144475	126154947	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DCAF12L2	ENSG00000198354	8552	AL445072.1	ENSG00000237208	28913	None	None
L1FLnI_Xq25ma	L1	L1	L1FLnI	chrX	126184720	126194752	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO1P53	ENSG00000230916	276953	DCAF12L2	ENSG00000198354	18431	None	None
L1FLnI_Xq25na	L1	L1	L1FLnI	chrX	126228958	126238927	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO1P53	ENSG00000230916	232778	DCAF12L2	ENSG00000198354	62669	None	None
L1FLnI_Xq25oa	L1	L1	L1FLnI	chrX	126268250	126277170	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO1P53	ENSG00000230916	194535	DCAF12L2	ENSG00000198354	101961	chrX:126272416-126272576	None
L1FLnI_Xq25pa	L1	L1	L1FLnI	chrX	126319447	126329594	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DCAF12L2	ENSG00000198354	153158	MTCO1P53	ENSG00000230916	142111	None	None
L1FLnI_Xq25qa	L1	L1	L1FLnI	chrX	126337962	126347579	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DCAF12L2	ENSG00000198354	171673	MTCO1P53	ENSG00000230916	124126	None	None
L1FLnI_Xq25ra	L1	L1	L1FLnI	chrX	126379652	126389776	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	DCAF12L2	ENSG00000198354	213363	MTCO1P53	ENSG00000230916	81929	chrX:126382852-126383146	None
L1FLnI_Xq25sa	L1	L1	L1FLnI	chrX	126420606	126429760	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCO1P53	ENSG00000230916	41945	DCAF12L2	ENSG00000198354	254317	None	chrX:126425613-126425615
L1FLnI_Xq25ta	L1	L1	L1FLnI	chrX	126457162	126465790	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	DCAF12L2	ENSG00000198354	290873	MTCO1P53	ENSG00000230916	5915	None	None
L1FLnI_Xq25ua	L1	L1	L1FLnI	chrX	126767291	126777207	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MTCYBP38	ENSG00000226414	37065	PRR32	ENSG00000183631	42522	None	None
L1FLnI_Xq25va	L1	L1	L1FLnI	chrX	126897418	126906467	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRR32	ENSG00000183631	75632	Z82209.1	ENSG00000230538	483875	None	None
L1FLnI_Xq25wa	L1	L1	L1FLnI	chrX	126923863	126933976	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z82209.1	ENSG00000230538	456366	PRR32	ENSG00000183631	102077	None	None
L1FLnI_Xq25xa	L1	L1	L1FLnI	chrX	126943292	126953387	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PRR32	ENSG00000183631	121506	Z82209.1	ENSG00000230538	436955	None	None
L1FLnI_Xq25ya	L1	L1	L1FLnI	chrX	127050335	127060450	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	Z82209.1	ENSG00000230538	329892	PRR32	ENSG00000183631	228549	None	None
L1FLnI_Xq25za	L1	L1	L1FLnI	chrX	127099788	127108542	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRR32	ENSG00000183631	278002	Z82209.1	ENSG00000230538	281800	None	None
L1ORF2_Xq25b	L1	L1	L1ORF2	chrX	127115685	127123731	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	Z82209.1	ENSG00000230538	266611	PRR32	ENSG00000183631	293899	None	None
L1FLnI_Xq25ab	L1	L1	L1FLnI	chrX	127249965	127259992	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	Z82209.1	ENSG00000230538	130350	PRR32	ENSG00000183631	428179	None	None
L1FLnI_Xq25bb	L1	L1	L1FLnI	chrX	127302032	127312388	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PRR32	ENSG00000183631	480246	Z82209.1	ENSG00000230538	77954	None	None
L1FLnI_Xq25cb	L1	L1	L1FLnI	chrX	127335841	127344551	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z82209.1	ENSG00000230538	45791	PRR32	ENSG00000183631	514055	None	None
L1FLnI_Xq25db	L1	L1	L1FLnI	chrX	127358725	127368748	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	PRR32	ENSG00000183631	536939	Z82209.1	ENSG00000230538	21594	None	None
L1FLnI_Xq25eb	L1	L1	L1FLnI	chrX	127369220	127379506	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRR32	ENSG00000183631	547434	Z82209.1	ENSG00000230538	10836	None	None
L1FLnI_Xq25fb	L1	L1	L1FLnI	chrX	127468802	127479383	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	Z82209.2	ENSG00000280275	74031	AL662814.1	ENSG00000274631	144027	None	None
L1FLnI_Xq25gb	L1	L1	L1FLnI	chrX	127516684	127526171	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z82209.2	ENSG00000280275	121913	AL662814.1	ENSG00000274631	97239	None	None
L1FLnI_Xq25hb	L1	L1	L1FLnI	chrX	127683985	127693868	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z75741.2	ENSG00000235274	34866	AL591643.1	ENSG00000260683	21455	None	None
L1FLnI_Xq25ib	L1	L1	L1FLnI	chrX	127761394	127770347	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z75741.2	ENSG00000235274	30536	Z75741.1	ENSG00000224548	25777	None	None
L1FLnI_Xq25jb	L1	L1	L1FLnI	chrX	127782256	127791357	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z75741.1	ENSG00000224548	4767	Z75741.2	ENSG00000235274	51398	None	None
L1FLnI_Xq25kb	L1	L1	L1FLnI	chrX	127785301	127795400	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	Z75741.2	ENSG00000235274	54443	Z75741.1	ENSG00000224548	724	None	None
L1FLnI_Xq25lb	L1	L1	L1FLnI	chrX	128041194	128051563	-	coding	AL008633.1,ACTRT1	lncRNA,protein_coding	SENSE,SENSE	ENSG00000225689,ENSG00000123165	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25mb	L1	L1	L1FLnI	chrX	128056295	128065075	+	noncoding	AL008633.1	lncRNA	ANTISENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25nb	L1	L1	L1FLnI	chrX	128144982	128154307	+	noncoding	AL008633.1	lncRNA	ANTISENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25ob	L1	L1	L1FLnI	chrX	128174070	128184392	+	noncoding	AL008633.1	lncRNA	ANTISENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25pb	L1	L1	L1FLnI	chrX	128195438	128205598	+	coding	AL008633.1	lncRNA	ANTISENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25qb	L1	L1	L1FLnI	chrX	128195438	128205507	+	coding	AL008633.1	lncRNA	ANTISENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25rb	L1	L1	L1FLnI	chrX	128284147	128292696	+	noncoding	AL008633.1	lncRNA	ANTISENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25sb	L1	L1	L1FLnI	chrX	128295889	128304541	+	noncoding	AL008633.1	lncRNA	ANTISENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25tb	L1	L1	L1FLnI	chrX	128379906	128390078	+	noncoding	AL008633.1	lncRNA	ANTISENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25ub	L1	L1	L1FLnI	chrX	128379906	128390091	+	noncoding	AL008633.1	lncRNA	ANTISENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25vb	L1	L1	L1FLnI	chrX	128515791	128524781	+	noncoding	AL008633.1	lncRNA	ANTISENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25wb	L1	L1	L1FLnI	chrX	128515926	128524781	+	noncoding	AL008633.1	lncRNA	ANTISENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25xb	L1	L1	L1FLnI	chrX	128536853	128545798	-	noncoding	AL008633.1	lncRNA	SENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25yb	L1	L1	L1FLnI	chrX	128543572	128552664	-	noncoding	AL008633.1	lncRNA	SENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25zb	L1	L1	L1FLnI	chrX	128668538	128679012	-	coding	AL008633.1	lncRNA	SENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25ac	L1	L1	L1FLnI	chrX	128729239	128739390	+	coding	AL008633.1	lncRNA	ANTISENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25bc	L1	L1	L1FLnI	chrX	128771935	128783593	-	noncoding	AL008633.1	lncRNA	SENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chrX:128779875-128779876
L1FLnI_Xq25cc	L1	L1	L1FLnI	chrX	128779156	128789170	+	coding	AL008633.1	lncRNA	ANTISENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	chrX:128779875-128779876
L1FLnI_Xq25dc	L1	L1	L1FLnI	chrX	128986745	128997109	-	noncoding	AL008633.1	lncRNA	SENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25ec	L1	L1	L1FLnI	chrX	129040839	129050901	+	coding	AL008633.1,AL359845.1	lncRNA,processed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000225689,ENSG00000234592	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25fc	L1	L1	L1FLnI	chrX	129171874	129183557	-	noncoding	AL008633.1	lncRNA	SENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25gc	L1	L1	L1FLnI	chrX	129205462	129214772	-	noncoding	AL008633.1	lncRNA	SENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25hc	L1	L1	L1FLnI	chrX	129205979	129214772	-	noncoding	AL008633.1	lncRNA	SENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25ic	L1	L1	L1FLnI	chrX	129237363	129247497	+	coding	AL008633.1	lncRNA	ANTISENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25jc	L1	L1	L1FLnI	chrX	129249733	129259410	-	noncoding	AL008633.1	lncRNA	SENSE	ENSG00000225689	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq25kc	L1	L1	L1FLnI	chrX	129333557	129343563	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL008633.1	ENSG00000225689	6850	RPS26P56	ENSG00000226339	64819	None	None
L1FLnI_Xq25lc	L1	L1	L1FLnI	chrX	129348709	129358464	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL008633.1	ENSG00000225689	22002	RPS26P56	ENSG00000226339	49918	None	None
L1FLnI_Xq25mc	L1	L1	L1FLnI	chrX	129384699	129393422	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL008633.1	ENSG00000225689	57992	RPS26P56	ENSG00000226339	14960	None	None
L1FLnI_Xq26.1a	L1	L1	L1FLnI	chrX	129853141	129862860	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL034405.1	ENSG00000235189	6204	ZDHHC9	ENSG00000188706	9232	None	None
L1FLnI_Xq26.1b	L1	L1	L1FLnI	chrX	129853152	129862860	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL034405.1	ENSG00000235189	6204	ZDHHC9	ENSG00000188706	9243	None	None
L1FLnI_Xq26.1c	L1	L1	L1FLnI	chrX	130447018	130457153	-	coding	Z82195.2	transcribed_unprocessed_pseudogene	SENSE	ENSG00000274775	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.1d	L1	L1	L1FLnI	chrX	130447028	130457153	-	coding	Z82195.2	transcribed_unprocessed_pseudogene	SENSE	ENSG00000274775	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.1e	L1	L1	L1FLnI	chrX	130513879	130523907	+	coding	Z82195.2,Z82195.3	transcribed_unprocessed_pseudogene,lncRNA	ANTISENSE,SENSE	ENSG00000274775,ENSG00000287160	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.1f	L1	L1	L1FLnI	chrX	130567169	130577161	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ENOX2	ENSG00000165675	46208	Z82195.1	ENSG00000271677	20695	None	None
L1FLnI_Xq26.1g	L1	L1	L1FLnI	chrX	130809951	130820374	+	coding	ENOX2	protein_coding	ANTISENSE	ENSG00000165675	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.1h	L1	L1	L1FLnI	chrX	130955433	130965457	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ENOX2	ENSG00000165675	52116	LINC01201	ENSG00000228659	16133	None	None
L1FLnI_Xq26.1i	L1	L1	L1FLnI	chrX	131107597	131119274	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL191P	ENSG00000241198	14812	ARHGAP36	ENSG00000147256	17712	None	None
L1FLnI_Xq26.1j	L1	L1	L1FLnI	chrX	131122720	131132743	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SL191P	ENSG00000241198	1343	ARHGAP36	ENSG00000147256	32835	None	None
L1FLnI_Xq26.1k	L1	L1	L1FLnI	chrX	131151774	131161795	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR11Q1P	ENSG00000237650	42273	RN7SL191P	ENSG00000241198	17384	None	None
L1FLnI_Xq26.1l	L1	L1	L1FLnI	chrX	131159058	131168388	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	OR11Q1P	ENSG00000237650	35680	RN7SL191P	ENSG00000241198	24668	None	None
L1FLnI_Xq26.1m	L1	L1	L1FLnI	chrX	131245046	131255074	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	IGSF1	ENSG00000147255	18432	AL603758.1	ENSG00000276205	23610	None	None
L1FLnI_Xq26.2a	L1	L1	L1FLnI	chrX	131377836	131387869	-	coding	IGSF1,AL135784.1	protein_coding,lncRNA	SENSE,ANTISENSE	ENSG00000147255,ENSG00000287806	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.2b	L1	L1	L1FLnI	chrX	131424472	131434914	+	noncoding	IGSF1,OR1AA1P	protein_coding,unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000147255,ENSG00000234288	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.2c	L1	L1	L1FLnI	chrX	131458100	131466615	+	coding	IGSF1	protein_coding	ANTISENSE	ENSG00000147255	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.2d	L1	L1	L1FLnI	chrX	131520992	131531119	+	coding	IGSF1	protein_coding	ANTISENSE	ENSG00000147255	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.2e	L1	L1	L1FLnI	chrX	131575182	131585235	+	coding	IGSF1,AL365256.1	protein_coding,lncRNA	ANTISENSE,SENSE	ENSG00000147255,ENSG00000286060	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	chrX:131576018-131576174	None
L1FLnI_Xq26.2f	L1	L1	L1FLnI	chrX	131660454	131670484	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	HDGFP1	ENSG00000227183	13564	FIRRE	ENSG00000213468	18295	None	None
L1FLnI_Xq26.2g	L1	L1	L1FLnI	chrX	131919553	131928850	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FIRRE	ENSG00000213468	88691	AL008629.1	ENSG00000235190	8820	None	None
L1FLnI_Xq26.2h	L1	L1	L1FLnI	chrX	131985989	131996150	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP514	ENSG00000200587	47033	STK26	ENSG00000134602	27152	None	chrX:131987487-131987528
L1FLnI_Xq26.2i	L1	L1	L1FLnI	chrX	132129312	132139260	+	coding	AL049792.1	processed_pseudogene	ANTISENSE	ENSG00000228819	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrX:132131375-132131385
L1FLnI_Xq26.2j	L1	L1	L1FLnI	chrX	132129312	132139280	+	coding	AL049792.1	processed_pseudogene	ANTISENSE	ENSG00000228819	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrX:132131375-132131385
L1FLnI_Xq26.2k	L1	L1	L1FLnI	chrX	132155647	132165658	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RAP2C	ENSG00000123728	37366	AL049792.1	ENSG00000228819	24295	None	None
L1FLnI_Xq26.2l	L1	L1	L1FLnI	chrX	132243540	132253671	-	coding	RAP2C-AS1	lncRNA	ANTISENSE	ENSG00000232160	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.2m	L1	L1	L1FLnI	chrX	132283970	132294117	-	noncoding	RAP2C-AS1	lncRNA	ANTISENSE	ENSG00000232160	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.2n	L1	L1	L1FLnI	chrX	132445303	132455624	-	noncoding	MBNL3	protein_coding	SENSE	ENSG00000076770	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.2o	L1	L1	L1FLnI	chrX	133006175	133016329	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HS6ST2	ENSG00000171004	44780	USP26	ENSG00000134588	8302	None	None
L1FLnI_Xq26.2p	L1	L1	L1FLnI	chrX	133035659	133046160	-	noncoding	USP26	protein_coding	SENSE	ENSG00000134588	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrX:133045430-133045437
L1FLnI_Xq26.2q	L1	L1	L1FLnI	chrX	133058005	133068387	+	noncoding	USP26	protein_coding	ANTISENSE	ENSG00000134588	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.2r	L1	L1	L1FLnI	chrX	133107882	133117032	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	USP26	ENSG00000134588	10773	Z77249.2	ENSG00000225949	24268	None	None
L1FLnI_Xq26.2s	L1	L1	L1FLnI	chrX	133107882	133117055	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	USP26	ENSG00000134588	10773	Z77249.2	ENSG00000225949	24245	None	None
L1FLnI_Xq26.2t	L1	L1	L1FLnI	chrX	133156373	133165060	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	Z77249.1	ENSG00000207100	3481	TFDP3	ENSG00000183434	51602	None	None
L1FLnI_Xq26.2u	L1	L1	L1FLnI	chrX	133275192	133285621	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU1-115P	ENSG00000202199	36376	GPC4	ENSG00000076716	14482	None	None
L1FLnI_Xq26.2v	L1	L1	L1FLnI	chrX	133617688	133627820	+	coding	GPC3	protein_coding	ANTISENSE	ENSG00000147257	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.2w	L1	L1	L1FLnI	chrX	134043665	134053809	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC002407.1	ENSG00000200572	88419	AF003529.1	ENSG00000232068	53579	None	None
L1FLnI_Xq26.2x	L1	L1	L1FLnI	chrX	134056138	134066280	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC002407.1	ENSG00000200572	75948	AF003529.1	ENSG00000232068	66052	None	None
L1FLnI_Xq26.2y	L1	L1	L1FLnI	chrX	134075996	134086104	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AF003529.1	ENSG00000232068	85910	AC002407.1	ENSG00000200572	56124	None	None
L1FLnI_Xq26.2z	L1	L1	L1FLnI	chrX	134113681	134123826	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AF003529.1	ENSG00000232068	123595	AC002407.1	ENSG00000200572	18402	None	None
L1FLnI_Xq26.2aa	L1	L1	L1FLnI	chrX	134295094	134304764	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FO393409.1	ENSG00000214961	21436	PHF6	ENSG00000156531	68489	None	None
L1FLnI_Xq26.3a	L1	L1	L1FLnI	chrX	135105754	135114271	-	noncoding	SMIM10L2B-AS1	lncRNA	ANTISENSE	ENSG00000228372	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.3b	L1	L1	L1FLnI	chrX	135159539	135169009	+	noncoding	CT55	protein_coding	ANTISENSE	ENSG00000169551	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrX:135160088-135160094
L1FLnI_Xq26.3c	L1	L1	L1FLnI	chrX	135182736	135192272	+	noncoding	AC234771.4	unprocessed_pseudogene	ANTISENSE	ENSG00000236491	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.3d	L1	L1	L1FLnI	chrX	135257331	135267451	-	coding	ZNF75D	protein_coding	SENSE	ENSG00000186376	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.3e	L1	L1	L1FLnI	chrX	135257341	135267451	-	coding	ZNF75D	protein_coding	SENSE	ENSG00000186376	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.3f	L1	L1	L1FLnI	chrX	135261736	135270881	+	noncoding	ZNF75D	protein_coding	ANTISENSE	ENSG00000186376	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.3g	L1	L1	L1FLnI	chrX	135261736	135270852	+	noncoding	ZNF75D	protein_coding	ANTISENSE	ENSG00000186376	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.3h	L1	L1	L1FLnI	chrX	135275992	135286451	-	noncoding	ZNF75D	protein_coding	SENSE	ENSG00000186376	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.3i	L1	L1	L1FLnI	chrX	135311363	135321527	-	noncoding	ZNF75D	protein_coding	SENSE	ENSG00000186376	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.3j	L1	L1	L1FLnI	chrX	135659018	135669167	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SAGE2P	ENSG00000198022	4424	SAGE3P	ENSG00000277486	16262	None	None
L1FLnI_Xq26.3k	L1	L1	L1FLnI	chrX	135935362	135945366	-	noncoding	CT45A11P	unprocessed_pseudogene	SENSE	ENSG00000230162	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.3l	L1	L1	L1FLnI	chrX	136439770	136449801	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	BRS3	ENSG00000102239	38146	ADGRG4	ENSG00000156920	22880	None	None
L1FLnI_Xq26.3m	L1	L1	L1FLnI	chrX	136976632	136986772	-	noncoding	AL390879.1,SRRM1P3	transcribed_unprocessed_pseudogene,processed_pseudogene	ANTISENSE,SENSE	ENSG00000234062,ENSG00000237307	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.3n	L1	L1	L1FLnI	chrX	137074224	137084369	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL355309.1	ENSG00000214748	240603	GPR101	ENSG00000165370	40377	None	None
L1FLnI_Xq26.3o	L1	L1	L1FLnI	chrX	137118920	137129050	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GPR101	ENSG00000165370	85073	AL355309.1	ENSG00000214748	195922	None	None
L1FLnI_Xq26.3p	L1	L1	L1FLnI	chrX	137126453	137136120	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GPR101	ENSG00000165370	92606	AL355309.1	ENSG00000214748	188852	None	None
L1FLnI_Xq26.3q	L1	L1	L1FLnI	chrX	137394293	137403577	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RAC1P4	ENSG00000237584	37681	AL355309.1	ENSG00000214748	69244	None	None
L1ORF2_Xq26.3	L1	L1	L1ORF2	chrX	137671100	137679276	+	coding	Z96074.1	lncRNA	SENSE	ENSG00000283692	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.3r	L1	L1	L1FLnI	chrX	137956186	137966321	+	noncoding	Z96074.1	lncRNA	SENSE	ENSG00000283692	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.3s	L1	L1	L1FLnI	chrX	137956186	137966315	+	noncoding	Z96074.1	lncRNA	SENSE	ENSG00000283692	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.3t	L1	L1	L1FLnI	chrX	137967483	137977612	+	noncoding	Z96074.1	lncRNA	SENSE	ENSG00000283692	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.3u	L1	L1	L1FLnI	chrX	138024296	138033168	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z96074.1	ENSG00000283692	42516	RN7SKP31	ENSG00000252163	364183	None	None
L1FLnI_Xq26.3v	L1	L1	L1FLnI	chrX	138069944	138080052	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z96074.1	ENSG00000283692	88164	RN7SKP31	ENSG00000252163	317299	None	None
L1FLnI_Xq26.3w	L1	L1	L1FLnI	chrX	138083531	138092855	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z96074.1	ENSG00000283692	101751	RN7SKP31	ENSG00000252163	304496	None	None
L1FLnI_Xq26.3x	L1	L1	L1FLnI	chrX	138101804	138111940	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z96074.1	ENSG00000283692	120024	RN7SKP31	ENSG00000252163	285411	None	None
L1FLnI_Xq26.3y	L1	L1	L1FLnI	chrX	138194813	138204933	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	Z96074.1	ENSG00000283692	213033	RN7SKP31	ENSG00000252163	192418	None	None
L1FLnI_Xq26.3z	L1	L1	L1FLnI	chrX	138227241	138237390	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	Z96074.1	ENSG00000283692	245461	RN7SKP31	ENSG00000252163	159961	None	None
L1FLnI_Xq26.3aa	L1	L1	L1FLnI	chrX	138379136	138389516	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	Z96074.1	ENSG00000283692	397356	RN7SKP31	ENSG00000252163	7835	None	None
L1FLnI_Xq26.3ba	L1	L1	L1FLnI	chrX	138407203	138416284	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP31	ENSG00000252163	9575	MAGEA13P	ENSG00000183981	66461	None	None
L1FLnI_Xq26.3ca	L1	L1	L1FLnI	chrX	138452346	138462940	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP31	ENSG00000252163	54718	MAGEA13P	ENSG00000183981	19805	None	None
L1FLnI_Xq26.3da	L1	L1	L1FLnI	chrX	138774809	138784828	+	coding	FGF13	protein_coding	ANTISENSE	ENSG00000129682	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.3ea	L1	L1	L1FLnI	chrX	138795557	138806051	-	coding	FGF13	protein_coding	SENSE	ENSG00000129682	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq26.3fa	L1	L1	L1FLnI	chrX	138831173	138842159	-	coding	FGF13	protein_coding	SENSE	ENSG00000129682	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq27.1a	L1	L1	L1FLnI	chrX	138992565	139002848	+	coding	FGF13	protein_coding	ANTISENSE	ENSG00000129682	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chrX:138994982-138995243	None
L1FLnI_Xq27.1b	L1	L1	L1FLnI	chrX	139004363	139014387	+	noncoding	FGF13	protein_coding	ANTISENSE	ENSG00000129682	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq27.1c	L1	L1	L1FLnI	chrX	139004363	139013979	+	noncoding	FGF13	protein_coding	ANTISENSE	ENSG00000129682	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq27.1d	L1	L1	L1FLnI	chrX	139155083	139164056	+	noncoding	FGF13	protein_coding	ANTISENSE	ENSG00000129682	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq27.1e	L1	L1	L1FLnI	chrX	139233977	139244678	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FGF13	ENSG00000129682	11200	SNURFL	ENSG00000173954	117362	None	None
L1FLnI_Xq27.1f	L1	L1	L1FLnI	chrX	139256051	139266169	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	FGF13	ENSG00000129682	33274	SNURFL	ENSG00000173954	95871	None	None
L1FLnI_Xq27.1g	L1	L1	L1FLnI	chrX	139320526	139331345	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FGF13	ENSG00000129682	97749	SNURFL	ENSG00000173954	30695	None	None
L1FLnI_Xq27.1h	L1	L1	L1FLnI	chrX	139347948	139359547	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SNURFL	ENSG00000173954	2493	FGF13	ENSG00000129682	125171	None	None
L1FLnI_Xq27.1i	L1	L1	L1FLnI	chrX	139407994	139418347	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SRD5A1P1	ENSG00000232549	28544	SNURFL	ENSG00000173954	45612	None	None
L1FLnI_Xq27.1j	L1	L1	L1FLnI	chrX	139407994	139416610	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SRD5A1P1	ENSG00000232549	30281	SNURFL	ENSG00000173954	45612	None	None
L1FLnI_Xq27.1k	L1	L1	L1FLnI	chrX	139432198	139442340	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SNURFL	ENSG00000173954	69816	SRD5A1P1	ENSG00000232549	4551	None	None
L1FLnI_Xq27.1l	L1	L1	L1FLnI	chrX	139432198	139442322	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SNURFL	ENSG00000173954	69816	SRD5A1P1	ENSG00000232549	4569	None	None
L1FLnI_Xq27.1m	L1	L1	L1FLnI	chrX	139520056	139530199	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SRD5A1P1	ENSG00000232549	72380	F9	ENSG00000101981	540	None	None
L1FLnI_Xq27.1n	L1	L1	L1FLnI	chrX	139669817	139679961	-	coding	MCF2	protein_coding	SENSE	ENSG00000101977	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq27.1o	L1	L1	L1FLnI	chrX	139955115	139965593	+	noncoding	CXorf66	protein_coding	ANTISENSE	ENSG00000203933	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	chrX:139965510-139965525
L1FLnI_Xq27.1p	L1	L1	L1FLnI	chrX	139988506	139998663	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL589987.2	ENSG00000233145	18605	CXorf66	ENSG00000203933	22985	None	None
L1FLnI_Xq27.1q	L1	L1	L1FLnI	chrX	140266320	140276850	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL137014.1	ENSG00000224942	120212	FO393408.1	ENSG00000231110	49516	None	None
L1FLnI_Xq27.1r	L1	L1	L1FLnI	chrX	140267886	140276850	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL137014.1	ENSG00000224942	120212	FO393408.1	ENSG00000231110	51082	None	None
L1FLnI_Xq27.1s	L1	L1	L1FLnI	chrX	140276833	140287945	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL137014.1	ENSG00000224942	109117	FO393408.1	ENSG00000231110	60029	None	None
L1FLnI_Xq27.1t	L1	L1	L1FLnI	chrX	140609254	140618898	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL844175.1	ENSG00000230668	62208	SOX3	ENSG00000134595	104138	None	None
L1FLnI_Xq27.1u	L1	L1	L1FLnI	chrX	140629426	140639582	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SOX3	ENSG00000134595	124310	AL844175.1	ENSG00000230668	41524	None	None
L1FLnI_Xq27.1v	L1	L1	L1FLnI	chrX	140809373	140820252	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR320D2	ENSG00000221081	105920	LINC00632	ENSG00000203930	16158	None	None
L1FLnI_Xq27.1w	L1	L1	L1FLnI	chrX	141040812	141050737	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SPANXB1	ENSG00000227234	37106	LDOC1	ENSG00000182195	60868	None	None
L1FLI_Xq27.2a	L1	L1	L1FLI	chrX	141420203	141428248	-	coding	SPANXA2-OT1	lncRNA	ANTISENSE	ENSG00000277215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq27.2a	L1	L1	L1FLnI	chrX	141444996	141454570	+	noncoding	SPANXA2-OT1	lncRNA	SENSE	ENSG00000277215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq27.2b	L1	L1	L1FLnI	chrX	141536675	141546599	-	coding	SPANXA2-OT1	lncRNA	ANTISENSE	ENSG00000277215	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq27.2c	L1	L1	L1FLnI	chrX	141798736	141807471	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MAGEC3	ENSG00000165509	30845	SPANXD	ENSG00000196406	99997	None	chrX:141802498-141802502
L1FLnI_Xq27.2d	L1	L1	L1FLnI	chrX	141924418	141935995	-	noncoding	AL031073.2	lncRNA	ANTISENSE	ENSG00000288098	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq27.2e	L1	L1	L1FLnI	chrX	141947043	141957007	-	coding	AL031073.2	lncRNA	ANTISENSE	ENSG00000288098	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq27.2f	L1	L1	L1FLnI	chrX	141947075	141957007	-	coding	AL031073.2	lncRNA	ANTISENSE	ENSG00000288098	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq27.2g	L1	L1	L1FLnI	chrX	142322717	142331681	-	noncoding	AL031073.2	lncRNA	ANTISENSE	ENSG00000288098	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq27.2h	L1	L1	L1FLnI	chrX	142328999	142337839	+	noncoding	AL031073.2	lncRNA	SENSE	ENSG00000288098	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq27.2i	L1	L1	L1FLnI	chrX	142334625	142344650	+	coding	AL031073.2	lncRNA	SENSE	ENSG00000288098	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq27.2j	L1	L1	L1FLnI	chrX	142385092	142395122	-	coding	AL031073.2	lncRNA	ANTISENSE	ENSG00000288098	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_Xq27.2b	L1	L1	L1FLI	chrX	142476844	142484883	+	coding	AL031073.2	lncRNA	SENSE	ENSG00000288098	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq27.3a	L1	L1	L1FLnI	chrX	143059362	143068592	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPANXN4	ENSG00000189326	24660	RN7SKP81	ENSG00000202473	21755	None	None
L1FLnI_Xq27.3b	L1	L1	L1FLnI	chrX	143059362	143068590	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPANXN4	ENSG00000189326	24660	RN7SKP81	ENSG00000202473	21757	None	None
L1FLnI_Xq27.3c	L1	L1	L1FLnI	chrX	143197093	143205734	-	noncoding	RN7SKP149	misc_RNA	SENSE	ENSG00000199878	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq27.3d	L1	L1	L1FLnI	chrX	143412099	143420685	-	noncoding	AC239727.1	lncRNA	ANTISENSE	ENSG00000227303	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq27.3e	L1	L1	L1FLnI	chrX	143522761	143534201	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLITRK4	ENSG00000179542	88589	SPANXN3	ENSG00000189252	5286	None	None
L1FLnI_Xq27.3f	L1	L1	L1FLnI	chrX	143522761	143532611	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SLITRK4	ENSG00000179542	90179	SPANXN3	ENSG00000189252	5286	None	None
L1FLnI_Xq27.3g	L1	L1	L1FLnI	chrX	143557945	143566741	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPANXN3	ENSG00000189252	40470	SLITRK4	ENSG00000179542	56049	None	None
L1FLnI_Xq27.3h	L1	L1	L1FLnI	chrX	143761807	143771895	-	coding	AL500522.1	lncRNA	ANTISENSE	ENSG00000225970	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq27.3i	L1	L1	L1FLnI	chrX	144579690	144588812	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPCP10	ENSG00000215054	251965	RRM2P4	ENSG00000235598	269997	None	None
L1FLnI_Xq27.3j	L1	L1	L1FLnI	chrX	144867377	144877210	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP189	ENSG00000201912	179898	HNRNPCP10	ENSG00000215054	25717	None	None
L1FLnI_Xq27.3k	L1	L1	L1FLnI	chrX	144874479	144884150	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	HNRNPCP10	ENSG00000215054	32819	RN7SKP189	ENSG00000201912	172958	None	None
L1FLnI_Xq27.3l	L1	L1	L1FLnI	chrX	145145396	145154025	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RN7SKP189	ENSG00000201912	87959	CYCSP44	ENSG00000233548	22557	None	None
L1FLnI_Xq27.3m	L1	L1	L1FLnI	chrX	145262539	145272290	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPANXN1	ENSG00000203923	6331	AL391256.1	ENSG00000231093	357928	None	None
L1FLnI_Xq27.3n	L1	L1	L1FLnI	chrX	145278315	145286926	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL391256.1	ENSG00000231093	343292	SPANXN1	ENSG00000203923	22107	None	None
L1FLnI_Xq27.3o	L1	L1	L1FLnI	chrX	145387553	145398739	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL391256.1	ENSG00000231093	231479	SPANXN1	ENSG00000203923	131345	None	None
L1FLnI_Xq27.3p	L1	L1	L1FLnI	chrX	145594955	145604646	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPANXN1	ENSG00000203923	338747	AL391256.1	ENSG00000231093	25572	None	None
L1FLnI_Xq27.3q	L1	L1	L1FLnI	chrX	145621058	145630620	+	coding	AL391256.1	processed_pseudogene	SENSE	ENSG00000231093	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrX:145630170-145630179
L1FLnI_Xq27.3r	L1	L1	L1FLnI	chrX	145621058	145630286	+	noncoding	AL391256.1	processed_pseudogene	SENSE	ENSG00000231093	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrX:145630170-145630179
L1FLnI_Xq27.3s	L1	L1	L1FLnI	chrX	145866522	145877261	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	MIR892C	ENSG00000252219	115489	SLITRK2	ENSG00000185985	36666	None	None
L1FLnI_Xq27.3t	L1	L1	L1FLnI	chrX	146115364	146124234	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR891A	ENSG00000216056	87492	RNA5SP517	ENSG00000201594	303222	None	None
L1FLnI_Xq27.3u	L1	L1	L1FLnI	chrX	146227427	146237595	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP517	ENSG00000201594	189861	MIR891A	ENSG00000216056	199555	None	None
L1FLnI_Xq27.3v	L1	L1	L1FLnI	chrX	146272879	146284475	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP517	ENSG00000201594	142981	MIR891A	ENSG00000216056	245007	None	None
L1FLnI_Xq27.3w	L1	L1	L1FLnI	chrX	146388616	146398021	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP517	ENSG00000201594	29435	MIR891A	ENSG00000216056	360744	None	None
L1FLnI_Xq27.3x	L1	L1	L1FLnI	chrX	146451368	146462101	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP517	ENSG00000201594	23796	AL109913.1	ENSG00000234748	75434	chrX:146457548-146457718	None
L1FLnI_Xq27.3y	L1	L1	L1FLnI	chrX	146452952	146462101	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5SP517	ENSG00000201594	25380	AL109913.1	ENSG00000234748	75434	chrX:146457548-146457718	None
L1FLnI_Xq27.3z	L1	L1	L1FLnI	chrX	146681855	146691599	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CXorf51B	ENSG00000235699	118172	Z97180.1	ENSG00000231686	61271	None	None
L1FLnI_Xq27.3aa	L1	L1	L1FLnI	chrX	147141537	147151661	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL589669.1	ENSG00000284377	29403	Z99497.2	ENSG00000271660	177052	None	None
L1FLnI_Xq27.3ba	L1	L1	L1FLnI	chrX	147141558	147151661	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL589669.1	ENSG00000284377	29403	Z99497.2	ENSG00000271660	177073	None	None
L1FLnI_Xq27.3ca	L1	L1	L1FLnI	chrX	147158869	147168666	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AL589669.1	ENSG00000284377	12398	Z99497.2	ENSG00000271660	194384	None	None
L1FLnI_Xq27.3da	L1	L1	L1FLnI	chrX	147196811	147206974	+	coding	AL589669.1,MIR513B	lncRNA,miRNA	SENSE,ANTISENSE	ENSG00000284377,ENSG00000207871	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq27.3ea	L1	L1	L1FLnI	chrX	147479517	147489719	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL009048.1	ENSG00000228855	101893	AL096861.1	ENSG00000274579	3071	None	None
L1ORF2_Xq27.3	L1	L1	L1ORF2	chrX	147652734	147660781	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AL009048.1	ENSG00000228855	60825	AC016925.1	ENSG00000227505	140224	None	None
L1FLnI_Xq27.3fa	L1	L1	L1FLnI	chrX	147815573	147826063	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016925.2	ENSG00000271175	2599	RNU6-382P	ENSG00000202051	1216	None	None
L1FLnI_Xq27.3ga	L1	L1	L1FLnI	chrX	147865710	147874323	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-382P	ENSG00000202051	38326	AC016925.3	ENSG00000287796	5038	None	None
L1FLnI_Xq27.3ha	L1	L1	L1FLnI	chrX	147964349	147974080	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FMR1	ENSG00000102081	13224	FMR1NB	ENSG00000176988	7257	None	None
L1FLnI_Xq28a	L1	L1	L1FLnI	chrX	148122967	148132975	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	U40455.1	ENSG00000233467	65039	FTH1P8	ENSG00000219507	70221	None	None
L1FLnI_Xq28b	L1	L1	L1FLnI	chrX	148175651	148186010	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	U40455.1	ENSG00000233467	12004	FTH1P8	ENSG00000219507	122905	None	None
L1FLnI_Xq28c	L1	L1	L1FLnI	chrX	148175651	148185592	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	U40455.1	ENSG00000233467	12422	FTH1P8	ENSG00000219507	122905	None	None
L1FLnI_Xq28d	L1	L1	L1FLnI	chrX	148269342	148280358	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	U40455.1	ENSG00000233467	70464	RPL7L1P11	ENSG00000176970	184350	None	None
L1FLnI_Xq28e	L1	L1	L1FLnI	chrX	148299262	148309364	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7L1P11	ENSG00000176970	155344	U40455.1	ENSG00000233467	100384	None	None
L1FLnI_Xq28f	L1	L1	L1FLnI	chrX	148325027	148335103	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7L1P11	ENSG00000176970	129605	U40455.1	ENSG00000233467	126149	None	None
L1FLnI_Xq28g	L1	L1	L1FLnI	chrX	148346443	148356536	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RPL7L1P11	ENSG00000176970	108172	U40455.1	ENSG00000233467	147565	None	None
L1FLnI_Xq28h	L1	L1	L1FLnI	chrX	148735123	148745672	-	coding	AFF2	protein_coding	ANTISENSE	ENSG00000155966	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28i	L1	L1	L1FLnI	chrX	148775366	148785641	-	noncoding	AFF2	protein_coding	ANTISENSE	ENSG00000155966	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28j	L1	L1	L1FLnI	chrX	149045353	149053935	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC231760.1	ENSG00000242186	2777	AFF2	ENSG00000155966	44690	None	None
L1FLnI_Xq28k	L1	L1	L1FLnI	chrX	149158695	149167862	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC231760.1	ENSG00000242186	101226	AC231656.1	ENSG00000287585	247024	None	None
L1FLnI_Xq28l	L1	L1	L1FLnI	chrX	149177668	149187685	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC231656.1	ENSG00000287585	227201	AC231760.1	ENSG00000242186	120199	None	None
L1FLnI_Xq28m	L1	L1	L1FLnI	chrX	149225474	149234157	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC231656.1	ENSG00000287585	180729	AC231760.1	ENSG00000242186	168005	None	None
L1FLnI_Xq28n	L1	L1	L1FLnI	chrX	149330511	149340527	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC231760.1	ENSG00000242186	273042	AC231656.1	ENSG00000287585	74359	None	None
L1FLnI_Xq28o	L1	L1	L1FLnI	chrX	149419266	149430083	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC231656.1	ENSG00000287585	3771	IDS	ENSG00000010404	46905	None	None
L1FLnI_Xq28p	L1	L1	L1FLnI	chrX	149432339	149442330	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC231656.1	ENSG00000287585	16844	IDS	ENSG00000010404	34658	None	None
L1FLnI_Xq28q	L1	L1	L1FLnI	chrX	149854413	149864318	+	noncoding	LINC00850	lncRNA	SENSE	ENSG00000280752	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28r	L1	L1	L1FLnI	chrX	150065626	150075124	-	coding	LINC00894	lncRNA	ANTISENSE	ENSG00000235703	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28s	L1	L1	L1FLnI	chrX	150116934	150127492	+	noncoding	LINC00894	lncRNA	SENSE	ENSG00000235703	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28t	L1	L1	L1FLnI	chrX	150116934	150125721	+	noncoding	LINC00894	lncRNA	SENSE	ENSG00000235703	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28u	L1	L1	L1FLnI	chrX	151105735	151114312	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MIR4330	ENSG00000265789	53910	RNA5SP525	ENSG00000212595	79329	None	None
L1FLnI_Xq28v	L1	L1	L1FLnI	chrX	151196328	151206495	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	KC877982.1	ENSG00000269993	13473	AF013593.1	ENSG00000228717	19734	None	None
L1FLnI_Xq28w	L1	L1	L1FLnI	chrX	151248930	151259518	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AF013593.1	ENSG00000228717	21215	AF013593.2	ENSG00000278724	15991	None	None
L1ORF2_Xq28	L1	L1	L1ORF2	chrX	151329320	151337365	+	coding	AF274853.1	lncRNA	ANTISENSE	ENSG00000287918	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28x	L1	L1	L1FLnI	chrX	152003273	152013566	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	GABRE	ENSG00000102287	28593	RPSAP60	ENSG00000228965	31748	None	None
L1FLnI_Xq28y	L1	L1	L1FLnI	chrX	152235499	152245528	-	coding	GABRA3	protein_coding	SENSE	ENSG00000011677	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28z	L1	L1	L1FLnI	chrX	152289018	152299334	-	coding	GABRA3	protein_coding	SENSE	ENSG00000011677	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28aa	L1	L1	L1FLnI	chrX	152304047	152313525	+	noncoding	GABRA3	protein_coding	ANTISENSE	ENSG00000011677	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28ba	L1	L1	L1FLnI	chrX	152312693	152321229	+	noncoding	GABRA3	protein_coding	ANTISENSE	ENSG00000011677	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28ca	L1	L1	L1FLnI	chrX	152321824	152331361	+	coding	GABRA3	protein_coding	ANTISENSE	ENSG00000011677	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28da	L1	L1	L1FLnI	chrX	152467641	152476587	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GABRA3	ENSG00000011677	16326	KRT8P8	ENSG00000223940	2990	None	None
L1FLnI_Xq28ea	L1	L1	L1FLnI	chrX	152541027	152551050	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	KRT8P8	ENSG00000223940	60003	AC244102.4	ENSG00000287394	23627	None	None
L1FLnI_Xq28fa	L1	L1	L1FLnI	chrX	152578416	152588556	+	coding	AC244102.4	lncRNA	ANTISENSE	ENSG00000287394	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28ga	L1	L1	L1FLnI	chrX	152834799	152844940	-	noncoding	NSDHL	protein_coding	ANTISENSE	ENSG00000147383	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28ha	L1	L1	L1FLnI	chrX	154842298	154852433	-	coding	F8	protein_coding	SENSE	ENSG00000185010	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28ia	L1	L1	L1FLnI	chrX	154935537	154945681	+	coding	F8	protein_coding	ANTISENSE	ENSG00000185010	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28ja	L1	L1	L1FLnI	chrX	155149342	155158778	-	noncoding	BX293995.1	unprocessed_pseudogene	ANTISENSE	ENSG00000235991	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28ka	L1	L1	L1FLnI	chrX	155156917	155166270	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	VBP1	ENSG00000155959	30737	BX293995.1	ENSG00000235991	414	None	None
L1FLnI_Xq28la	L1	L1	L1FLnI	chrX	155194128	155204269	+	coding	VBP1	protein_coding	SENSE	ENSG00000155959	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28ma	L1	L1	L1FLnI	chrX	155299077	155309101	-	coding	CLIC2	protein_coding	SENSE	ENSG00000155962	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28na	L1	L1	L1FLnI	chrX	155315767	155326257	+	noncoding	CLIC2	protein_coding	ANTISENSE	ENSG00000155962	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28oa	L1	L1	L1FLnI	chrX	155315767	155326249	+	noncoding	CLIC2	protein_coding	ANTISENSE	ENSG00000155962	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28pa	L1	L1	L1FLnI	chrX	155351172	155360391	+	coding	AC234781.1	lncRNA	ANTISENSE	ENSG00000224216	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28qa	L1	L1	L1FLnI	chrX	155418476	155428618	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	F8A2	ENSG00000274791	35246	F8A3	ENSG00000277150	28296	None	None
L1FLnI_Xq28ra	L1	L1	L1FLnI	chrX	155418476	155428612	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	F8A2	ENSG00000274791	35246	F8A3	ENSG00000277150	28302	None	None
L1FLnI_Xq28sa	L1	L1	L1FLnI	chrX	155480859	155490078	-	coding	TMLHE-AS1,BX571846.1,TMLHE	lncRNA,lncRNA,protein_coding	ANTISENSE,ANTISENSE,SENSE	ENSG00000224533,ENSG00000225393,ENSG00000185973	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLI_Xq28	L1	L1	L1FLI	chrX	155515004	155523050	-	coding	TMLHE-AS1,TMLHE	lncRNA,protein_coding	ANTISENSE,SENSE	ENSG00000224533,ENSG00000185973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28ta	L1	L1	L1FLnI	chrX	155564355	155574493	+	coding	TMLHE-AS1,TMLHE	lncRNA,protein_coding	SENSE,ANTISENSE	ENSG00000224533,ENSG00000185973	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28ua	L1	L1	L1FLnI	chrX	155722307	155732323	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SPRY3	ENSG00000168939	35489	TMLHE	ENSG00000185973	52363	None	None
L1FLnI_Xq28va	L1	L1	L1FLnI	chrX	155805296	155815468	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SPRY3	ENSG00000168939	22837	AMD1P2	ENSG00000237801	13117	None	None
L1FLnI_Xq28wa	L1	L1	L1FLnI	chrX	155911865	155922271	-	coding	VAMP7	protein_coding	ANTISENSE	ENSG00000124333	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Xq28xa	L1	L1	L1FLnI	chrX	155930219	155940323	-	coding	VAMP7	protein_coding	ANTISENSE	ENSG00000124333	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yp11.32a	L1	L1	L1FLnI	chrY	23589	33766	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1334P	ENSG00000251841	2750983	NA	NA	NA	None	None
L1FLnI_Yp11.32b	L1	L1	L1FLnI	chrY	244875	255015	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1334P	ENSG00000251841	2529734	NA	NA	NA	None	None
L1FLnI_Yp11.32c	L1	L1	L1FLnI	chrY	267940	278508	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1334P	ENSG00000251841	2506241	NA	NA	NA	None	None
L1FLnI_Yp11.31a	L1	L1	L1FLnI	chrY	366184	377788	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1334P	ENSG00000251841	2406961	NA	NA	NA	None	None
L1FLnI_Yp11.31b	L1	L1	L1FLnI	chrY	393776	402945	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1334P	ENSG00000251841	2381804	NA	NA	NA	None	None
L1FLnI_Yp11.31c	L1	L1	L1FLnI	chrY	550214	560724	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	RNU6-1334P	ENSG00000251841	2224025	None	None
L1FLnI_Yp11.2a	L1	L1	L1FLnI	chrY	658573	668586	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	RNU6-1334P	ENSG00000251841	2116163	None	None
L1FLnI_Yp11.2b	L1	L1	L1FLnI	chrY	751667	760299	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	RNU6-1334P	ENSG00000251841	2024450	None	None
L1FLnI_Yp11.2c	L1	L1	L1FLnI	chrY	935988	944649	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	RNU6-1334P	ENSG00000251841	1840100	None	None
L1FLnI_Yp11.2d	L1	L1	L1FLnI	chrY	1031963	1041210	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	RNU6-1334P	ENSG00000251841	1743539	None	None
L1FLnI_Yp11.2e	L1	L1	L1FLnI	chrY	1204790	1215634	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1334P	ENSG00000251841	1569115	NA	NA	NA	None	None
L1FLnI_Yp11.2f	L1	L1	L1FLnI	chrY	1214108	1223886	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	RNU6-1334P	ENSG00000251841	1560863	None	None
L1FLnI_Yp11.2g	L1	L1	L1FLnI	chrY	1307569	1316455	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	RNU6-1334P	ENSG00000251841	1468294	None	None
L1FLnI_Yp11.2h	L1	L1	L1FLnI	chrY	1429981	1438866	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	RNU6-1334P	ENSG00000251841	1345883	None	None
L1FLnI_Yp11.2i	L1	L1	L1FLnI	chrY	1455038	1465424	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1334P	ENSG00000251841	1319325	NA	NA	NA	None	None
L1FLnI_Yp11.2j	L1	L1	L1FLnI	chrY	1534013	1544379	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	RNU6-1334P	ENSG00000251841	1240370	None	None
L1FLnI_Yp11.2k	L1	L1	L1FLnI	chrY	1633670	1643806	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	RNU6-1334P	ENSG00000251841	1140943	None	None
L1FLnI_Yp11.2l	L1	L1	L1FLnI	chrY	1643277	1653459	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1334P	ENSG00000251841	1131290	NA	NA	NA	None	None
L1FLnI_Yp11.2m	L1	L1	L1FLnI	chrY	1689087	1700462	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1334P	ENSG00000251841	1084287	NA	NA	NA	None	None
L1FLnI_Yp11.2n	L1	L1	L1FLnI	chrY	1773481	1783424	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	RNU6-1334P	ENSG00000251841	1001325	None	None
L1FLnI_Yp11.2o	L1	L1	L1FLnI	chrY	1921265	1930906	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1334P	ENSG00000251841	853843	NA	NA	NA	None	None
L1FLnI_Yp11.2p	L1	L1	L1FLnI	chrY	1921931	1930906	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1334P	ENSG00000251841	853843	NA	NA	NA	None	None
L1FLnI_Yp11.2q	L1	L1	L1FLnI	chrY	1955938	1965511	+	NA	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	RNU6-1334P	ENSG00000251841	819238	None	None
L1FLnI_Yp11.2r	L1	L1	L1FLnI	chrY	2081380	2091545	+	NA	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	RNU6-1334P	ENSG00000251841	693204	None	None
L1FLnI_Yp11.2s	L1	L1	L1FLnI	chrY	2105503	2114745	-	NA	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1334P	ENSG00000251841	670004	NA	NA	NA	None	None
L1FLnI_Yp11.2t	L1	L1	L1FLnI	chrY	2166936	2176959	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1334P	ENSG00000251841	607790	NA	NA	NA	None	None
L1FLnI_Yp11.2u	L1	L1	L1FLnI	chrY	2188261	2198418	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	RNU6-1334P	ENSG00000251841	586331	None	None
L1FLnI_Yp11.2v	L1	L1	L1FLnI	chrY	2259130	2269160	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1334P	ENSG00000251841	515589	NA	NA	NA	None	None
L1FLnI_Yp11.2w	L1	L1	L1FLnI	chrY	2301484	2310252	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-1334P	ENSG00000251841	474497	NA	NA	NA	None	None
L1FLnI_Yp11.2x	L1	L1	L1FLnI	chrY	2349770	2359096	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	RNU6-1334P	ENSG00000251841	425653	None	None
L1FLnI_Yp11.2y	L1	L1	L1FLnI	chrY	2459351	2469779	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NA	NA	NA	RNU6-1334P	ENSG00000251841	314970	None	None
L1FLnI_Yp11.2z	L1	L1	L1FLnI	chrY	2824191	2834220	-	noncoding	TOMM22P2,AC006040.1	processed_pseudogene,lncRNA	ANTISENSE,SENSE	ENSG00000232195,ENSG00000286130	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yp11.2aa	L1	L1	L1FLnI	chrY	3047652	3057381	+	noncoding	LINC00278	lncRNA	SENSE	ENSG00000231535	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yp11.2ba	L1	L1	L1FLnI	chrY	3081374	3090601	-	noncoding	LINC00278	lncRNA	ANTISENSE	ENSG00000231535	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yp11.2ca	L1	L1	L1FLnI	chrY	3104544	3115158	+	noncoding	LINC00278	lncRNA	SENSE	ENSG00000231535	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yp11.2da	L1	L1	L1FLnI	chrY	3226189	3235737	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AGPAT5P1	ENSG00000234652	58071	LINC00278	ENSG00000231535	25680	None	None
L1FLnI_Yp11.2ea	L1	L1	L1FLnI	chrY	3507991	3516907	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	PRRC2CP1	ENSG00000216777	32745	AGPAT5P1	ENSG00000234652	213165	None	None
L1FLnI_Yp11.2fa	L1	L1	L1FLnI	chrY	3825815	3836415	+	noncoding	AC012078.2	lncRNA	SENSE	ENSG00000286050	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yp11.2ga	L1	L1	L1FLnI	chrY	3825822	3836415	+	noncoding	AC012078.2	lncRNA	SENSE	ENSG00000286050	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yp11.2ha	L1	L1	L1FLnI	chrY	3841807	3851819	+	noncoding	AC012078.2,AC012078.1	lncRNA,processed_pseudogene	SENSE,ANTISENSE	ENSG00000286050,ENSG00000218410	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yp11.2ia	L1	L1	L1FLnI	chrY	3971616	3981100	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010737.1	ENSG00000229308	55397	UBE2V1P3	ENSG00000229518	104894	None	None
L1FLnI_Yp11.2ja	L1	L1	L1FLnI	chrY	3986996	3996901	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010737.1	ENSG00000229308	39596	UBE2V1P3	ENSG00000229518	120274	None	None
L1FLnI_Yp11.2ka	L1	L1	L1FLnI	chrY	3987009	3996901	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010737.1	ENSG00000229308	39596	UBE2V1P3	ENSG00000229518	120287	None	None
L1FLnI_Yp11.2la	L1	L1	L1FLnI	chrY	4028879	4039004	+	coding	AC010737.1	lncRNA	SENSE	ENSG00000229308	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yp11.2ma	L1	L1	L1FLnI	chrY	4058871	4069275	-	noncoding	AC010737.1	lncRNA	ANTISENSE	ENSG00000229308	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yp11.2na	L1	L1	L1FLnI	chrY	4067456	4077469	+	noncoding	AC010737.1	lncRNA	SENSE	ENSG00000229308	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yp11.2oa	L1	L1	L1FLnI	chrY	4347839	4356619	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERBP1P2	ENSG00000225878	445066	RNU6-303P	ENSG00000252900	172749	None	None
L1FLnI_Yp11.2pa	L1	L1	L1FLnI	chrY	4372126	4382154	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERBP1P2	ENSG00000225878	419531	RNU6-303P	ENSG00000252900	197036	None	None
L1FLnI_Yp11.2qa	L1	L1	L1FLnI	chrY	4372138	4382154	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERBP1P2	ENSG00000225878	419531	RNU6-303P	ENSG00000252900	197048	None	None
L1FLnI_Yp11.2ra	L1	L1	L1FLnI	chrY	4408041	4418139	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERBP1P2	ENSG00000225878	383546	RNU6-303P	ENSG00000252900	232951	None	None
L1FLnI_Yp11.2sa	L1	L1	L1FLnI	chrY	4467582	4477534	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERBP1P2	ENSG00000225878	324151	RNU6-303P	ENSG00000252900	292492	None	None
L1FLnI_Yp11.2ta	L1	L1	L1FLnI	chrY	4643031	4652831	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-303P	ENSG00000252900	467941	SERBP1P2	ENSG00000225878	148854	None	None
L1FLnI_Yp11.2ua	L1	L1	L1FLnI	chrY	4788079	4798094	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SERBP1P2	ENSG00000225878	3591	RNU6-303P	ENSG00000252900	612989	None	None
L1FLnI_Yp11.2va	L1	L1	L1FLnI	chrY	4923174	4933288	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010722.1	ENSG00000277930	60570	SERBP1P2	ENSG00000225878	120326	None	None
L1FLnI_Yp11.2wa	L1	L1	L1FLnI	chrY	5314482	5324593	-	noncoding	PCDH11Y	protein_coding	ANTISENSE	ENSG00000099715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yp11.2xa	L1	L1	L1FLnI	chrY	5352341	5362356	-	noncoding	PCDH11Y	protein_coding	ANTISENSE	ENSG00000099715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yp11.2ya	L1	L1	L1FLnI	chrY	5408489	5418609	+	noncoding	PCDH11Y	protein_coding	SENSE	ENSG00000099715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLI_Yp11.2	L1	L1	L1FLI	chrY	5605153	5613201	-	coding	PCDH11Y	protein_coding	ANTISENSE	ENSG00000099715	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yp11.2za	L1	L1	L1FLnI	chrY	6161071	6171203	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTTY23B	ENSG00000250204	71243	DLGAP5P1	ENSG00000237195	1806	None	None
L1FLnI_Yp11.2ab	L1	L1	L1FLnI	chrY	6807086	6815969	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC013412.1	ENSG00000274365	17742	GOT2P5	ENSG00000233634	21738	None	None
L1FLnI_Yp11.2bb	L1	L1	L1FLnI	chrY	7094878	7103795	+	noncoding	TBL1Y,GPR143P	protein_coding,unprocessed_pseudogene	SENSE,ANTISENSE	ENSG00000092377,ENSG00000232583	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yp11.2cb	L1	L1	L1FLnI	chrY	7156153	7166172	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GPR143P	ENSG00000232583	49651	PRKY	ENSG00000099725	107800	None	None
L1FLnI_Yp11.2db	L1	L1	L1FLnI	chrY	7179611	7189771	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRKY	ENSG00000099725	84201	GPR143P	ENSG00000232583	73109	None	None
L1FLnI_Yp11.2eb	L1	L1	L1FLnI	chrY	7179634	7189771	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRKY	ENSG00000099725	84201	GPR143P	ENSG00000232583	73132	None	None
L1FLnI_Yp11.2fb	L1	L1	L1FLnI	chrY	7326483	7335108	-	noncoding	PRKY	protein_coding	ANTISENSE	ENSG00000099725	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrY:7329546-7329551,chrY:7331324-7331328,chrY:7333601-7333617
L1FLnI_Yp11.2gb	L1	L1	L1FLnI	chrY	7378095	7388238	-	noncoding	PRKY,RNU6-941P	protein_coding,snRNA	ANTISENSE,ANTISENSE	ENSG00000099725,ENSG00000252155	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yp11.2hb	L1	L1	L1FLnI	chrY	8441360	8450548	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016991.1	ENSG00000275866	66816	ZNF736P10Y	ENSG00000216824	21460	None	None
L1FLnI_Yp11.2ib	L1	L1	L1FLnI	chrY	8486025	8496154	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016991.1	ENSG00000275866	21210	ZNF736P10Y	ENSG00000216824	66125	None	None
L1FLnI_Yp11.2jb	L1	L1	L1FLnI	chrY	8573833	8583970	+	noncoding	AC064829.1	lncRNA	SENSE	ENSG00000286217	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yp11.2kb	L1	L1	L1FLnI	chrY	9206635	9216487	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP4	ENSG00000232924	14428	USP9YP4	ENSG00000238154	2024	None	None
L1FLnI_Yp11.2lb	L1	L1	L1FLnI	chrY	9215605	9225613	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP4	ENSG00000232924	5302	USP9YP4	ENSG00000238154	10994	None	None
L1FLnI_Yp11.2mb	L1	L1	L1FLnI	chrY	9254415	9264539	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP4	ENSG00000232924	23168	RBMY1A3P	ENSG00000197038	46591	None	None
L1FLnI_Yp11.2nb	L1	L1	L1FLnI	chrY	9272079	9281938	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP4	ENSG00000232924	40832	RBMY1A3P	ENSG00000197038	29192	None	None
L1FLnI_Yp11.2ob	L1	L1	L1FLnI	chrY	9350004	9360023	+	coding	FAM197Y8,TSPY8	transcribed_processed_pseudogene,protein_coding	ANTISENSE,SENSE	ENSG00000225560,ENSG00000229549	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	chrY:9357841-9357862
L1FLnI_Yp11.2pb	L1	L1	L1FLnI	chrY	9395847	9405994	+	NA	FAM197Y6,AC006158.3,TSPY3	lncRNA,transcribed_unprocessed_pseudogene,protein_coding	ANTISENSE,ANTISENSE,SENSE	ENSG00000237802,ENSG00000286173,ENSG00000228927	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yp11.2qb	L1	L1	L1FLnI	chrY	9736420	9746020	-	noncoding	TTTY2	lncRNA	ANTISENSE	ENSG00000212855	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yp11.2rb	L1	L1	L1FLnI	chrY	9784594	9794717	+	noncoding	TTTY22	lncRNA	SENSE	ENSG00000224075	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yp11.2sb	L1	L1	L1FLnI	chrY	9842050	9852257	-	noncoding	RBMY2NP	unprocessed_pseudogene	SENSE	ENSG00000229208	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yp11.2tb	L1	L1	L1FLnI	chrY	10065503	10075684	-	coding	TSPY5P,AC006987.1	transcribed_unprocessed_pseudogene,processed_pseudogene	SENSE,ANTISENSE	ENSG00000225685,ENSG00000278478	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yp11.2ub	L1	L1	L1FLnI	chrY	10203934	10214042	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC140113.4	ENSG00000273858	828680	RNA5-8SP6	ENSG00000251705	3628	None	None
L1FLnI_Yp11.2vb	L1	L1	L1FLnI	chrY	10219265	10229422	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5-8SP6	ENSG00000251705	18959	AC140113.4	ENSG00000273858	813300	None	None
L1FLnI_Yp11.2wb	L1	L1	L1FLnI	chrY	10249340	10258207	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5-8SP6	ENSG00000251705	49034	AC140113.4	ENSG00000273858	784515	None	None
L1FLnI_Yp11.2xb	L1	L1	L1FLnI	chrY	10286650	10296930	+	NA	None	NA	NA	None	INTERGENIC	NA	NA	RNA5-8SP6	ENSG00000251705	86344	AC140113.4	ENSG00000273858	745792	None	None
L1FLnI_Yp11.1a	L1	L1	L1FLnI	chrY	10348521	10358542	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC140113.4	ENSG00000273858	684180	RNA5-8SP6	ENSG00000251705	148215	None	None
L1FLnI_Yp11.1b	L1	L1	L1FLnI	chrY	10397108	10407136	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC140113.4	ENSG00000273858	635586	RNA5-8SP6	ENSG00000251705	196802	None	None
L1FLnI_Yq11.1a	L1	L1	L1FLnI	chrY	10481852	10492028	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC140113.4	ENSG00000273858	550694	RNA5-8SP6	ENSG00000251705	281546	None	None
L1FLnI_Yq11.1b	L1	L1	L1FLnI	chrY	10481852	10491573	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC140113.4	ENSG00000273858	551149	RNA5-8SP6	ENSG00000251705	281546	None	None
L1FLnI_Yq11.21a	L1	L1	L1FLnI	chrY	10702033	10711099	-	NA	None	NA	NA	None	INTERGENIC	NA	NA	AC140113.4	ENSG00000273858	331623	RNA5-8SP6	ENSG00000251705	501727	None	None
L1FLnI_Yq11.21b	L1	L1	L1FLnI	chrY	10739041	10749075	+	NA	None	NA	NA	None	INTERGENIC	NA	NA	RNA5-8SP6	ENSG00000251705	538735	AC140113.4	ENSG00000273858	293647	None	None
L1FLnI_Yq11.21c	L1	L1	L1FLnI	chrY	10748893	10759296	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC140113.4	ENSG00000273858	283426	RNA5-8SP6	ENSG00000251705	548587	None	None
L1FLnI_Yq11.21d	L1	L1	L1FLnI	chrY	10777295	10787313	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC140113.4	ENSG00000273858	255409	RNA5-8SP6	ENSG00000251705	576989	None	None
L1FLnI_Yq11.21e	L1	L1	L1FLnI	chrY	10906361	10916335	+	NA	None	NA	NA	None	INTERGENIC	NA	NA	RNA5-8SP6	ENSG00000251705	706055	AC140113.4	ENSG00000273858	126387	None	None
L1FLnI_Yq11.21f	L1	L1	L1FLnI	chrY	10936968	10947115	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNA5-8SP6	ENSG00000251705	736662	AC140113.4	ENSG00000273858	95607	None	None
L1FLnI_Yq11.21g	L1	L1	L1FLnI	chrY	10958743	10968763	-	NA	None	NA	NA	None	INTERGENIC	NA	NA	AC140113.4	ENSG00000273858	73959	RNA5-8SP6	ENSG00000251705	758437	None	None
L1FLnI_Yq11.21h	L1	L1	L1FLnI	chrY	10988726	10998754	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC140113.4	ENSG00000273858	43968	RNA5-8SP6	ENSG00000251705	788420	None	None
L1FLnI_Yq11.21i	L1	L1	L1FLnI	chrY	10994855	11004993	-	NA	None	NA	NA	None	INTERGENIC	NA	NA	AC140113.4	ENSG00000273858	37729	RNA5-8SP6	ENSG00000251705	794549	None	None
L1FLnI_Yq11.21j	L1	L1	L1FLnI	chrY	11024763	11034564	-	NA	None	NA	NA	None	INTERGENIC	NA	NA	AC140113.4	ENSG00000273858	8158	RNA5-8SP6	ENSG00000251705	824457	None	None
L1FLnI_Yq11.21k	L1	L1	L1FLnI	chrY	11063947	11074102	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	C2orf27AP1	ENSG00000273693	11374	AC140113.4	ENSG00000273858	21004	None	None
L1FLnI_Yq11.21l	L1	L1	L1FLnI	chrY	11124297	11134440	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC140113.1	ENSG00000270570	16410	AC134878.1	ENSG00000274231	9810	None	None
L1FLnI_Yq11.21m	L1	L1	L1FLnI	chrY	11166850	11176996	+	noncoding	AC134878.2,ANKRD20A6P	transcribed_unprocessed_pseudogene,processed_pseudogene	ANTISENSE,SENSE	ENSG00000278212,ENSG00000274502	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.21n	L1	L1	L1FLnI	chrY	11166850	11177026	+	noncoding	AC134878.2,ANKRD20A6P	transcribed_unprocessed_pseudogene,processed_pseudogene	ANTISENSE,SENSE	ENSG00000278212,ENSG00000274502	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.21o	L1	L1	L1FLnI	chrY	11185398	11194000	-	coding	AC134878.2	transcribed_unprocessed_pseudogene	SENSE	ENSG00000278212	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.21p	L1	L1	L1FLnI	chrY	11227554	11237556	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC134878.2	ENSG00000278212	12528	DUX4L16	ENSG00000258567	69362	None	None
L1FLnI_Yq11.21q	L1	L1	L1FLnI	chrY	11242216	11252219	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	DUX4L16	ENSG00000258567	54699	AC134878.2	ENSG00000278212	27190	None	None
L1FLnI_Yq11.21r	L1	L1	L1FLnI	chrY	11312302	11321498	-	coding	DUX4L17	unprocessed_pseudogene	ANTISENSE	ENSG00000259154	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	chrY:11311955-11312412,chrY:11314325-11314506	chrY:11314806-11314810
L1FLnI_Yq11.21s	L1	L1	L1FLnI	chrY	11421224	11431396	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CHEK2P1	ENSG00000275828	2508	MTND1P12	ENSG00000225433	14022	None	None
L1FLnI_Yq11.21t	L1	L1	L1FLnI	chrY	11454041	11464454	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC134879.1	ENSG00000224567	7940	AC134879.2	ENSG00000271375	9273	None	None
L1FLnI_Yq11.21u	L1	L1	L1FLnI	chrY	11497291	11507314	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC134879.2	ENSG00000271375	23054	RCC2P1	ENSG00000234385	273738	None	None
L1FLnI_Yq11.21v	L1	L1	L1FLnI	chrY	11604206	11614067	-	NA	None	NA	NA	None	INTERGENIC	NA	NA	RCC2P1	ENSG00000234385	166985	AC134879.2	ENSG00000271375	129969	None	None
L1FLnI_Yq11.21w	L1	L1	L1FLnI	chrY	11788597	11798745	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ASS1P6	ENSG00000215583	123791	RCC2P1	ENSG00000234385	6070	None	None
L1FLnI_Yq11.21x	L1	L1	L1FLnI	chrY	11788617	11798745	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ASS1P6	ENSG00000215583	123791	RCC2P1	ENSG00000234385	6090	None	None
L1FLnI_Yq11.21y	L1	L1	L1FLnI	chrY	11825226	11835449	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ASS1P6	ENSG00000215583	87087	RCC2P1	ENSG00000234385	42699	None	None
L1FLnI_Yq11.21z	L1	L1	L1FLnI	chrY	12076151	12086080	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	MXRA5Y	ENSG00000235649	88765	GYG2P1	ENSG00000206159	1930	None	None
L1FLnI_Yq11.21aa	L1	L1	L1FLnI	chrY	12129405	12138006	-	noncoding	GYG2P1	transcribed_unprocessed_pseudogene	SENSE	ENSG00000206159	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.21ba	L1	L1	L1FLnI	chrY	12167778	12178021	+	noncoding	GYG2P1	transcribed_unprocessed_pseudogene	ANTISENSE	ENSG00000206159	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.21ca	L1	L1	L1FLnI	chrY	12265743	12275765	-	noncoding	GYG2P1,RN7SL702P	transcribed_unprocessed_pseudogene,misc_RNA	SENSE,ANTISENSE	ENSG00000206159,ENSG00000243980	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.21da	L1	L1	L1FLnI	chrY	12371019	12381075	-	noncoding	GYG2P1,ARSDP1	transcribed_unprocessed_pseudogene,unprocessed_pseudogene	SENSE,ANTISENSE	ENSG00000206159,ENSG00000225117	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.21ea	L1	L1	L1FLnI	chrY	12371032	12381075	-	noncoding	GYG2P1,ARSDP1	transcribed_unprocessed_pseudogene,unprocessed_pseudogene	SENSE,ANTISENSE	ENSG00000206159,ENSG00000225117	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221a	L1	L1	L1FLnI	chrY	12534289	12544485	-	noncoding	USP9Y,SHROOM2P1	protein_coding,transcribed_unprocessed_pseudogene	ANTISENSE,ANTISENSE	ENSG00000114374,ENSG00000226863	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrY:12537641-12537669,chrY:12537793-12537799
L1FLnI_Yq11.221b	L1	L1	L1FLnI	chrY	12555234	12563991	-	noncoding	USP9Y	protein_coding	ANTISENSE	ENSG00000114374	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221c	L1	L1	L1FLnI	chrY	12584194	12593584	+	noncoding	USP9Y	protein_coding	SENSE	ENSG00000114374	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221d	L1	L1	L1FLnI	chrY	12621556	12631294	+	noncoding	USP9Y,MED14P1	protein_coding,unprocessed_pseudogene	SENSE,ANTISENSE	ENSG00000114374,ENSG00000233774	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221e	L1	L1	L1FLnI	chrY	12641084	12651093	+	noncoding	USP9Y	protein_coding	SENSE	ENSG00000114374	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221f	L1	L1	L1FLnI	chrY	12744276	12754412	-	noncoding	USP9Y	protein_coding	ANTISENSE	ENSG00000114374	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221g	L1	L1	L1FLnI	chrY	12803032	12812993	-	coding	USP9Y,CDY4P	protein_coding,processed_pseudogene	ANTISENSE,SENSE	ENSG00000114374,ENSG00000228411	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221h	L1	L1	L1FLnI	chrY	12825926	12836054	+	noncoding	USP9Y	protein_coding	SENSE	ENSG00000114374	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221i	L1	L1	L1FLnI	chrY	12928015	12938173	+	noncoding	CASKP1	unprocessed_pseudogene	ANTISENSE	ENSG00000234059	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221j	L1	L1	L1FLnI	chrY	12940344	12950365	-	noncoding	CASKP1	unprocessed_pseudogene	SENSE	ENSG00000234059	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221k	L1	L1	L1FLnI	chrY	12960372	12970498	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SFPQP1	ENSG00000224035	113292	CASKP1	ENSG00000234059	12190	None	chrY:12967249-12967255,chrY:12967279-12967283
L1FLnI_Yq11.221l	L1	L1	L1FLnI	chrY	13004214	13013898	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SFPQP1	ENSG00000224035	69892	CASKP1	ENSG00000234059	56032	None	None
L1FLnI_Yq11.221m	L1	L1	L1FLnI	chrY	13004227	13013898	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SFPQP1	ENSG00000224035	69892	CASKP1	ENSG00000234059	56045	None	None
L1FLnI_Yq11.221n	L1	L1	L1FLnI	chrY	13030861	13041356	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CASKP1	ENSG00000234059	82679	SFPQP1	ENSG00000224035	42434	None	None
L1FLnI_Yq11.221o	L1	L1	L1FLnI	chrY	13100469	13110483	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	SFPQP1	ENSG00000224035	4664	TAB3P1	ENSG00000235462	43448	None	None
L1FLnI_Yq11.221p	L1	L1	L1FLnI	chrY	13236454	13246602	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UTY	ENSG00000183878	1777	DPPA2P1	ENSG00000223915	5015	None	None
L1FLnI_Yq11.221q	L1	L1	L1FLnI	chrY	13241072	13251083	+	noncoding	UTY	protein_coding	ANTISENSE	ENSG00000183878	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221r	L1	L1	L1FLnI	chrY	13332721	13342763	-	coding	UTY	protein_coding	SENSE	ENSG00000183878	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221s	L1	L1	L1FLnI	chrY	13435889	13446024	-	noncoding	UTY	protein_coding	SENSE	ENSG00000183878	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	chrY:13435784-13436243	None
L1FLnI_Yq11.221t	L1	L1	L1FLnI	chrY	13576363	13586498	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UTY	ENSG00000183878	95690	TMSB4Y	ENSG00000154620	117401	None	None
L1FLnI_Yq11.221u	L1	L1	L1FLnI	chrY	13642040	13652110	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	UTY	ENSG00000183878	161367	TMSB4Y	ENSG00000154620	51789	None	None
L1FLnI_Yq11.221v	L1	L1	L1FLnI	chrY	13898225	13908401	+	noncoding	ANOS2P	transcribed_unprocessed_pseudogene	SENSE	ENSG00000241859	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221w	L1	L1	L1FLnI	chrY	13965157	13975507	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	VCY	ENSG00000129864	10265	ANOS2P	ENSG00000241859	49333	None	None
L1FLnI_Yq11.221x	L1	L1	L1FLnI	chrY	13977079	13987245	+	noncoding	VCY	protein_coding	ANTISENSE	ENSG00000129864	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221y	L1	L1	L1FLnI	chrY	14116827	14126791	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PNPLA4P1	ENSG00000235451	30227	AC010723.1	ENSG00000223517	149421	None	None
L1FLnI_Yq11.221z	L1	L1	L1FLnI	chrY	14127887	14137226	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PNPLA4P1	ENSG00000235451	41287	AC010723.1	ENSG00000223517	138986	None	None
L1FLnI_Yq11.221aa	L1	L1	L1FLnI	chrY	14187684	14196360	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010723.1	ENSG00000223517	79852	PNPLA4P1	ENSG00000235451	101084	None	None
L1FLnI_Yq11.221ba	L1	L1	L1FLnI	chrY	14187697	14196360	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010723.1	ENSG00000223517	79852	PNPLA4P1	ENSG00000235451	101097	None	None
L1FLnI_Yq11.221ca	L1	L1	L1FLnI	chrY	14200065	14210094	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PNPLA4P1	ENSG00000235451	113465	AC010723.1	ENSG00000223517	66118	None	None
L1FLnI_Yq11.221da	L1	L1	L1FLnI	chrY	14278943	14288984	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NLGN4Y	ENSG00000165246	233589	AC010723.1	ENSG00000223517	1454	None	None
L1FLnI_Yq11.221ea	L1	L1	L1FLnI	chrY	14427786	14437878	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC010723.1	ENSG00000223517	150297	NLGN4Y	ENSG00000165246	84695	None	None
L1FLnI_Yq11.221fa	L1	L1	L1FLnI	chrY	14457428	14466808	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NLGN4Y	ENSG00000165246	55765	AC010723.1	ENSG00000223517	179939	None	None
L1FLnI_Yq11.221ga	L1	L1	L1FLnI	chrY	14526655	14536745	+	noncoding	NLGN4Y	protein_coding	SENSE	ENSG00000165246	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221ha	L1	L1	L1FLnI	chrY	14657733	14667888	-	noncoding	NLGN4Y	protein_coding	ANTISENSE	ENSG00000165246	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221ia	L1	L1	L1FLnI	chrY	14750815	14759810	-	noncoding	NLGN4Y	protein_coding	ANTISENSE	ENSG00000165246	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221ja	L1	L1	L1FLnI	chrY	14923378	14933525	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	MED13P1	ENSG00000236131	15310	CYCSP46	ENSG00000227949	8022	None	None
L1FLnI_Yq11.221ka	L1	L1	L1FLnI	chrY	14960769	14970935	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006989.1	ENSG00000224518	18054	PUDPP1	ENSG00000234620	377727	None	None
L1FLnI_Yq11.221la	L1	L1	L1FLnI	chrY	15104624	15113577	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006989.1	ENSG00000224518	161909	PUDPP1	ENSG00000234620	235085	None	None
L1FLnI_Yq11.221ma	L1	L1	L1FLnI	chrY	15109578	15119809	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006989.1	ENSG00000224518	166863	PUDPP1	ENSG00000234620	228853	None	None
L1FLnI_Yq11.221na	L1	L1	L1FLnI	chrY	15159208	15169234	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC006989.1	ENSG00000224518	216493	PUDPP1	ENSG00000234620	179428	None	None
L1FLnI_Yq11.221oa	L1	L1	L1FLnI	chrY	15173787	15183813	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PUDPP1	ENSG00000234620	164849	AC006989.1	ENSG00000224518	231072	None	None
L1FLnI_Yq11.221pa	L1	L1	L1FLnI	chrY	15223241	15233472	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PUDPP1	ENSG00000234620	115190	AC006989.1	ENSG00000224518	280526	None	None
L1FLnI_Yq11.221qa	L1	L1	L1FLnI	chrY	15229473	15238425	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PUDPP1	ENSG00000234620	110237	AC006989.1	ENSG00000224518	286758	None	None
L1FLnI_Yq11.221ra	L1	L1	L1FLnI	chrY	15372117	15382283	-	coding	PUDPP1	unprocessed_pseudogene	SENSE	ENSG00000234620	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221sa	L1	L1	L1FLnI	chrY	15409532	15419679	-	noncoding	PUDPP1	unprocessed_pseudogene	SENSE	ENSG00000234620	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221ta	L1	L1	L1FLnI	chrY	15583243	15592240	+	noncoding	STSP1	unprocessed_pseudogene	SENSE	ENSG00000227166	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221ua	L1	L1	L1FLnI	chrY	16108921	16118954	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	STSP1	ENSG00000227166	515590	AC011749.1	ENSG00000252689	19294	None	None
L1FLnI_Yq11.221va	L1	L1	L1FLnI	chrY	16326946	16337082	-	coding	RNU6-184P	snRNA	SENSE	ENSG00000252323	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221wa	L1	L1	L1FLnI	chrY	16326953	16337082	-	coding	RNU6-184P	snRNA	SENSE	ENSG00000252323	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221xa	L1	L1	L1FLnI	chrY	16373081	16383166	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-184P	ENSG00000252323	36692	AC011751.1	ENSG00000286201	216564	None	None
L1FLnI_Yq11.221ya	L1	L1	L1FLnI	chrY	16373081	16383179	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-184P	ENSG00000252323	36692	AC011751.1	ENSG00000286201	216551	None	None
L1FLnI_Yq11.221za	L1	L1	L1FLnI	chrY	16387517	16397671	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-184P	ENSG00000252323	51128	AC011751.1	ENSG00000286201	202059	None	None
L1FLnI_Yq11.221ab	L1	L1	L1FLnI	chrY	16403166	16413275	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011751.1	ENSG00000286201	186455	RNU6-184P	ENSG00000252323	66777	None	chrY:16408748-16408756,chrY:16408972-16408977,chrY:16408986-16408999,chrY:16409003-16409014
L1FLnI_Yq11.221bb	L1	L1	L1FLnI	chrY	16403171	16413275	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011751.1	ENSG00000286201	186455	RNU6-184P	ENSG00000252323	66782	None	chrY:16408748-16408756,chrY:16408972-16408977,chrY:16408986-16408999,chrY:16409003-16409014
L1FLnI_Yq11.221cb	L1	L1	L1FLnI	chrY	16431983	16441238	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011751.1	ENSG00000286201	158492	RNU6-184P	ENSG00000252323	95594	None	None
L1FLnI_Yq11.221db	L1	L1	L1FLnI	chrY	16469475	16479555	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	RNU6-184P	ENSG00000252323	133086	AC011751.1	ENSG00000286201	120175	None	None
L1FLnI_Yq11.221eb	L1	L1	L1FLnI	chrY	16591306	16601333	-	noncoding	AC011751.1	lncRNA	SENSE	ENSG00000286201	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221fb	L1	L1	L1FLnI	chrY	16598844	16608999	-	noncoding	AC011751.1	lncRNA	SENSE	ENSG00000286201	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221gb	L1	L1	L1FLnI	chrY	16598844	16607994	-	noncoding	AC011751.1	lncRNA	SENSE	ENSG00000286201	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221hb	L1	L1	L1FLnI	chrY	16631679	16641039	-	coding	AC011751.1	lncRNA	SENSE	ENSG00000286201	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.221ib	L1	L1	L1FLnI	chrY	16685536	16695689	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SURF6P1	ENSG00000228518	497137	AC011751.1	ENSG00000286201	40997	None	None
L1FLnI_Yq11.221jb	L1	L1	L1FLnI	chrY	16798531	16808632	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SURF6P1	ENSG00000228518	384194	AC011751.1	ENSG00000286201	153992	None	None
L1FLnI_Yq11.221kb	L1	L1	L1FLnI	chrY	16842488	16852289	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SURF6P1	ENSG00000228518	340537	AC011751.1	ENSG00000286201	197949	None	None
L1FLnI_Yq11.221lb	L1	L1	L1FLnI	chrY	16902974	16912876	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SURF6P1	ENSG00000228518	279950	AC011751.1	ENSG00000286201	258435	None	None
L1FLnI_Yq11.221mb	L1	L1	L1FLnI	chrY	17010419	17019659	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SURF6P1	ENSG00000228518	173167	AC011751.1	ENSG00000286201	365880	None	None
L1FLnI_Yq11.221nb	L1	L1	L1FLnI	chrY	17016650	17026618	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	AC011751.1	ENSG00000286201	372111	SURF6P1	ENSG00000228518	166208	None	None
L1FLnI_Yq11.221ob	L1	L1	L1FLnI	chrY	17052121	17062258	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	SURF6P1	ENSG00000228518	130568	AC011751.1	ENSG00000286201	407582	None	None
L1FLnI_Yq11.221pb	L1	L1	L1FLnI	chrY	17065122	17075142	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011751.1	ENSG00000286201	420583	SURF6P1	ENSG00000228518	117684	None	None
L1FLnI_Yq11.222a	L1	L1	L1FLnI	chrY	17108707	17117786	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC011751.1	ENSG00000286201	464168	SURF6P1	ENSG00000228518	75040	None	None
L1FLnI_Yq11.222b	L1	L1	L1FLnI	chrY	17159962	17170561	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SURF6P1	ENSG00000228518	22265	AC011751.1	ENSG00000286201	515423	None	None
L1FLnI_Yq11.222c	L1	L1	L1FLnI	chrY	17205908	17216029	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP35	ENSG00000271595	248850	SURF6P1	ENSG00000228518	12256	None	None
L1FLnI_Yq11.222d	L1	L1	L1FLnI	chrY	17245965	17256097	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	SURF6P1	ENSG00000228518	52313	ELOCP35	ENSG00000271595	208782	None	None
L1FLnI_Yq11.222e	L1	L1	L1FLnI	chrY	17583015	17593039	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	FAM224B	ENSG00000230663	3261	CLUHP1	ENSG00000238191	28220	None	None
L1FLnI_Yq11.222f	L1	L1	L1FLnI	chrY	17598448	17608718	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CLUHP1	ENSG00000238191	12541	FAM224B	ENSG00000230663	18694	None	None
L1FLnI_Yq11.222g	L1	L1	L1FLnI	chrY	17675311	17685421	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007742.2	ENSG00000275578	20547	TAF9P1	ENSG00000226353	45909	None	None
L1FLnI_Yq11.222h	L1	L1	L1FLnI	chrY	17692182	17702223	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TAF9P1	ENSG00000226353	62780	AC007742.2	ENSG00000275578	3745	None	None
L1FLnI_Yq11.222i	L1	L1	L1FLnI	chrY	17714438	17725136	-	noncoding	CDY5P	unprocessed_pseudogene	ANTISENSE	ENSG00000226449	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.222j	L1	L1	L1FLnI	chrY	17743224	17753364	+	noncoding	PRYP1	unprocessed_pseudogene	ANTISENSE	ENSG00000224166	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.222k	L1	L1	L1FLnI	chrY	17832884	17842955	-	noncoding	ELOCP6	processed_pseudogene	SENSE	ENSG00000225740	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.222l	L1	L1	L1FLnI	chrY	17889544	17899593	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	CDY6P	ENSG00000229138	5836	USP9YP7	ENSG00000224485	9162	None	None
L1FLnI_Yq11.222m	L1	L1	L1FLnI	chrY	17908881	17918064	-	noncoding	USP9YP7,USP9YP6	unprocessed_pseudogene,unprocessed_pseudogene	ANTISENSE,SENSE	ENSG00000224485,ENSG00000226116	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.222n	L1	L1	L1FLnI	chrY	17918582	17927860	+	noncoding	USP9YP6	unprocessed_pseudogene	ANTISENSE	ENSG00000226116	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.222o	L1	L1	L1FLnI	chrY	18040305	18049038	-	coding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP12	ENSG00000230412	19445	CDY2A	ENSG00000182415	11708	None	None
L1FLnI_Yq11.222p	L1	L1	L1FLnI	chrY	18061734	18070848	-	noncoding	ELOCP12	processed_pseudogene	ANTISENSE	ENSG00000230412	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.222q	L1	L1	L1FLnI	chrY	18137935	18148029	-	coding	ACTG1P11	processed_pseudogene	ANTISENSE	ENSG00000229465	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrY:18147806-18147812
L1FLnI_Yq11.222r	L1	L1	L1FLnI	chrY	18144504	18154537	+	coding	ACTG1P11	processed_pseudogene	SENSE	ENSG00000229465	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrY:18147806-18147812
L1FLnI_Yq11.222s	L1	L1	L1FLnI	chrY	18155823	18165953	-	noncoding	PRYP2	unprocessed_pseudogene	ANTISENSE	ENSG00000231311	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.222t	L1	L1	L1FLnI	chrY	18162156	18172184	-	noncoding	PRYP2	unprocessed_pseudogene	ANTISENSE	ENSG00000231311	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.222u	L1	L1	L1FLnI	chrY	18197897	18208087	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TAF9P2	ENSG00000229302	68520	CDY9P	ENSG00000232899	13483	None	None
L1FLnI_Yq11.222v	L1	L1	L1FLnI	chrY	18223939	18233958	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TAF9P2	ENSG00000229302	42649	CDY9P	ENSG00000232899	39525	None	None
L1FLnI_Yq11.222w	L1	L1	L1FLnI	chrY	18265778	18275812	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TAF9P2	ENSG00000229302	795	CDY9P	ENSG00000232899	81364	None	None
L1FLnI_Yq11.222x	L1	L1	L1FLnI	chrY	18278764	18288779	+	noncoding	CLUHP2	unprocessed_pseudogene	SENSE	ENSG00000228945	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.222y	L1	L1	L1FLnI	chrY	18341558	18351663	-	noncoding	FAM224A,RNA5SP522,RNA5SP523	lncRNA,rRNA_pseudogene,rRNA_pseudogene	ANTISENSE,SENSE,SENSE	ENSG00000233522,ENSG00000251953,ENSG00000252667	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.222z	L1	L1	L1FLnI	chrY	18341562	18351663	-	noncoding	FAM224A,RNA5SP522,RNA5SP523	lncRNA,rRNA_pseudogene,rRNA_pseudogene	ANTISENSE,SENSE,SENSE	ENSG00000233522,ENSG00000251953,ENSG00000252667	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.222aa	L1	L1	L1FLnI	chrY	18569440	18579557	+	noncoding	HSFY1,GPM6BP1	protein_coding,unprocessed_pseudogene	SENSE,SENSE	ENSG00000172468,ENSG00000230458	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.222ba	L1	L1	L1FLnI	chrY	19255955	19266094	+	noncoding	AC010133.1	processed_pseudogene	ANTISENSE	ENSG00000274282	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.222ca	L1	L1	L1FLnI	chrY	19301023	19310909	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC010133.1	ENSG00000274282	40148	GAPDHP19	ENSG00000234529	16660	None	None
L1FLnI_Yq11.222da	L1	L1	L1FLnI	chrY	19557635	19567666	-	coding	BCORP1,TXLNGY	transcribed_unprocessed_pseudogene,transcribed_unprocessed_pseudogene	SENSE,ANTISENSE	ENSG00000215580,ENSG00000131002	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	chrY:19567323-19567391,chrY:19567485-19567519,chrY:19567001-19567014
L1FLnI_Yq11.223a	L1	L1	L1FLnI	chrY	19712539	19722424	-	coding	KDM5D	protein_coding	SENSE	ENSG00000012817	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.223b	L1	L1	L1FLnI	chrY	19757343	19767483	-	coding	AC010889.2	lncRNA	ANTISENSE	ENSG00000288049	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.223c	L1	L1	L1FLnI	chrY	19991278	20000011	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF886P	ENSG00000232522	1174	RCC2P2	ENSG00000237997	3426	None	None
L1FLnI_Yq11.223d	L1	L1	L1FLnI	chrY	20069968	20079981	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF886P	ENSG00000232522	57764	ZNF885P	ENSG00000228764	310070	None	None
L1FLnI_Yq11.223e	L1	L1	L1FLnI	chrY	20086682	20095438	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF886P	ENSG00000232522	74478	ZNF885P	ENSG00000228764	294613	None	None
L1FLnI_Yq11.223f	L1	L1	L1FLnI	chrY	20115046	20124125	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF885P	ENSG00000228764	265926	ZNF886P	ENSG00000232522	102842	None	None
L1FLnI_Yq11.223g	L1	L1	L1FLnI	chrY	20134826	20144949	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF886P	ENSG00000232522	122622	ZNF885P	ENSG00000228764	245102	None	None
L1FLnI_Yq11.223h	L1	L1	L1FLnI	chrY	20359690	20369726	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	ZNF886P	ENSG00000232522	347486	ZNF885P	ENSG00000228764	20325	None	None
L1FLnI_Yq11.223i	L1	L1	L1FLnI	chrY	20476106	20486142	-	noncoding	TTTY10	lncRNA	SENSE	ENSG00000229236	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.223j	L1	L1	L1FLnI	chrY	20597668	20606617	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009494.2	ENSG00000286247	118714	EIF1AY	ENSG00000198692	4514	None	None
L1FLnI_Yq11.223k	L1	L1	L1FLnI	chrY	20865245	20875384	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	GAPDHP17	ENSG00000229551	2908	TMEM167AP1	ENSG00000226504	31960	None	None
L1FLnI_Yq11.223l	L1	L1	L1FLnI	chrY	20910709	20920590	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM167AP1	ENSG00000226504	3147	AC007876.1	ENSG00000254488	117699	None	None
L1FLnI_Yq11.223m	L1	L1	L1FLnI	chrY	20919634	20929618	+	coding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM167AP1	ENSG00000226504	12072	AC007876.1	ENSG00000254488	108671	None	None
L1FLnI_Yq11.223n	L1	L1	L1FLnI	chrY	20971304	20981493	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TMEM167AP1	ENSG00000226504	63742	AC007876.1	ENSG00000254488	56796	None	None
L1FLnI_Yq11.223o	L1	L1	L1FLnI	chrY	20991032	21000551	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007876.1	ENSG00000254488	37738	TMEM167AP1	ENSG00000226504	83470	None	None
L1FLnI_Yq11.223p	L1	L1	L1FLnI	chrY	21104504	21114611	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007876.1	ENSG00000254488	59780	TOMM22P1	ENSG00000237427	16259	None	chrY:21109545-21109551
L1FLnI_Yq11.223q	L1	L1	L1FLnI	chrY	21104504	21114624	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC007876.1	ENSG00000254488	59780	TOMM22P1	ENSG00000237427	16246	None	chrY:21109545-21109551
L1FLnI_Yq11.223r	L1	L1	L1FLnI	chrY	21273705	21282669	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NEFLP1	ENSG00000232634	51616	AC010086.1	ENSG00000226918	28599	None	None
L1FLnI_Yq11.223s	L1	L1	L1FLnI	chrY	21278670	21288874	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	NEFLP1	ENSG00000232634	56581	AC010086.1	ENSG00000226918	22394	None	None
L1FLnI_Yq11.223t	L1	L1	L1FLnI	chrY	21328519	21337756	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	PRORY	ENSG00000183146	45198	AC010086.1	ENSG00000226918	9624	None	None
L1FLnI_Yq11.223u	L1	L1	L1FLnI	chrY	21437615	21447054	+	noncoding	AC010086.3	lncRNA	ANTISENSE	ENSG00000288057	INTRONIC	NA	NA	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.223v	L1	L1	L1FLnI	chrY	21512437	21522460	-	noncoding	RBMY1B,RBMY1A1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000242875,ENSG00000234414	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.223w	L1	L1	L1FLnI	chrY	21512444	21522460	-	noncoding	RBMY1B,RBMY1A1	protein_coding,protein_coding	ANTISENSE,ANTISENSE	ENSG00000242875,ENSG00000234414	EXONIC	TRUE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.223x	L1	L1	L1FLnI	chrY	21625021	21633755	-	noncoding	ELOCP5	processed_pseudogene	SENSE	ENSG00000271123	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.223y	L1	L1	L1FLnI	chrY	21703716	21713729	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY11P	ENSG00000230029	5496	OFD1P16Y	ENSG00000277519	103850	None	None
L1FLnI_Yq11.223z	L1	L1	L1FLnI	chrY	21720431	21729187	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY11P	ENSG00000230029	22211	OFD1P16Y	ENSG00000277519	88392	None	None
L1FLnI_Yq11.223aa	L1	L1	L1FLnI	chrY	21748795	21757874	-	NA	None	NA	NA	None	INTERGENIC	NA	NA	OFD1P16Y	ENSG00000277519	59705	CDY11P	ENSG00000230029	50575	None	None
L1FLnI_Yq11.223ba	L1	L1	L1FLnI	chrY	21768579	21778702	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	CDY11P	ENSG00000230029	70359	OFD1P16Y	ENSG00000277519	38877	None	None
L1FLnI_Yq11.223ca	L1	L1	L1FLnI	chrY	21991029	22001067	+	coding	OFD1P8Y	unprocessed_pseudogene	SENSE	ENSG00000231159	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.223da	L1	L1	L1FLnI	chrY	22094160	22104199	-	noncoding	PRY2,AC007359.1	protein_coding,lncRNA	SENSE,SENSE	ENSG00000169807,ENSG00000236951	EXONIC	TRUE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.223ea	L1	L1	L1FLnI	chrY	22328441	22338564	-	noncoding	TTTY25P	unprocessed_pseudogene	ANTISENSE	ENSG00000259247	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.223fa	L1	L1	L1FLnI	chrY	22349272	22358351	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTTY25P	ENSG00000259247	16772	TSPY21P	ENSG00000237902	42052	None	None
L1FLnI_Yq11.223ga	L1	L1	L1FLnI	chrY	22377960	22386716	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TSPY21P	ENSG00000237902	13687	TTTY25P	ENSG00000259247	45460	None	None
L1FLnI_Yq11.223ha	L1	L1	L1FLnI	chrY	22393419	22403432	-	coding	TSPY21P	unprocessed_pseudogene	SENSE	ENSG00000237902	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.223ia	L1	L1	L1FLnI	chrY	22473402	22482136	+	noncoding	AC008175.1	lncRNA	SENSE	ENSG00000235059	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.223ja	L1	L1	L1FLnI	chrY	22584725	22594749	+	noncoding	OFD1P9Y	unprocessed_pseudogene	ANTISENSE	ENSG00000230476	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.223ka	L1	L1	L1FLnI	chrY	22584725	22594742	+	noncoding	OFD1P9Y	unprocessed_pseudogene	ANTISENSE	ENSG00000230476	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.223la	L1	L1	L1FLnI	chrY	22660131	22669570	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC016694.1	ENSG00000224917	1046	RBMY2BP	ENSG00000224657	1253	None	None
L1FLnI_Yq11.223ma	L1	L1	L1FLnI	chrY	22769428	22778664	+	noncoding	RBMY2WP	unprocessed_pseudogene	ANTISENSE	ENSG00000230727	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.223na	L1	L1	L1FLnI	chrY	22818304	22828509	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTTY17A	ENSG00000228240	23075	RBMY2WP	ENSG00000230727	48517	None	None
L1FLnI_Yq11.223oa	L1	L1	L1FLnI	chrY	22824510	22833470	-	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TTTY17A	ENSG00000228240	18114	RBMY2WP	ENSG00000230727	54723	None	None
L1FLnI_Yq11.223pa	L1	L1	L1FLnI	chrY	22992526	23002646	-	noncoding	BPY2	protein_coding	ANTISENSE	ENSG00000183753	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.223qa	L1	L1	L1FLnI	chrY	22992539	23002646	-	noncoding	BPY2	protein_coding	ANTISENSE	ENSG00000183753	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.223ra	L1	L1	L1FLnI	chrY	23106577	23116096	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	TRIM60P9Y	ENSG00000227251	47391	DAZ1	ENSG00000188120	13259	None	None
L1FLnI_Yq11.223sa	L1	L1	L1FLnI	chrY	23125632	23135821	-	noncoding	DAZ1	protein_coding	SENSE	ENSG00000188120	EXONIC	FALSE	TRUE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.223ta	L1	L1	L1FLnI	chrY	23177499	23187483	-	noncoding	DAZ1	protein_coding	SENSE	ENSG00000188120	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.223ua	L1	L1	L1FLnI	chrY	23186527	23196409	-	coding	DAZ1	protein_coding	SENSE	ENSG00000188120	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.223va	L1	L1	L1FLnI	chrY	23231737	23241876	-	coding	DAZ2	protein_coding	ANTISENSE	ENSG00000205944	EXONIC	FALSE	FALSE	NA	NA	NA	NA	NA	NA	None	None
L1FLnI_Yq11.223wa	L1	L1	L1FLnI	chrY	23501047	23509996	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	REREP1Y	ENSG00000225189	28767	AC009947.1	ENSG00000230073	13325	None	None
L1FLnI_Yq11.223xa	L1	L1	L1FLnI	chrY	23554756	23563889	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	AC009947.2	ENSG00000236647	3371	OFD1P10Y	ENSG00000225466	17706	None	None
L1FLnI_Yq11.23	L1	L1	L1FLnI	chrY	23816810	23826932	+	noncoding	None	NA	NA	None	INTERGENIC	NA	NA	ELOCP9	ENSG00000231540	7751	CDY15P	ENSG00000223362	28590	None	None