# Copyright (c) 2008-2025 the MRtrix3 contributors. # # This Source Code Form is subject to the terms of the Mozilla Public # License, v. 2.0. If a copy of the MPL was not distributed with this # file, You can obtain one at http://mozilla.org/MPL/2.0/. # # Covered Software is provided under this License on an "as is" # basis, without warranty of any kind, either expressed, implied, or # statutory, including, without limitation, warranties that the # Covered Software is free of defects, merchantable, fit for a # particular purpose or non-infringing. # See the Mozilla Public License v. 2.0 for more details. # # For more details, see http://www.mrtrix.org/. # Lookup table for extracting the relevant grey matter parcellations from the a2009s FreeSurfer segmentation 0 Unknown 0 0 0 0 1 ctx_lh_G_and_S_frontomargin 23 220 60 255 2 ctx_lh_G_and_S_occipital_inf 23 60 180 255 3 ctx_lh_G_and_S_paracentral 63 100 60 255 4 ctx_lh_G_and_S_subcentral 63 20 220 255 5 ctx_lh_G_and_S_transv_frontopol 13 0 250 255 6 ctx_lh_G_and_S_cingul-Ant 26 60 0 255 7 ctx_lh_G_and_S_cingul-Mid-Ant 26 60 75 255 8 ctx_lh_G_and_S_cingul-Mid-Post 26 60 150 255 9 ctx_lh_G_cingul-Post-dorsal 25 60 250 255 10 ctx_lh_G_cingul-Post-ventral 60 25 25 255 11 ctx_lh_G_cuneus 180 20 20 255 12 ctx_lh_G_front_inf-Opercular 220 20 100 255 13 ctx_lh_G_front_inf-Orbital 140 60 60 255 14 ctx_lh_G_front_inf-Triangul 180 220 140 255 15 ctx_lh_G_front_middle 140 100 180 255 16 ctx_lh_G_front_sup 180 20 140 255 17 ctx_lh_G_Ins_lg_and_S_cent_ins 23 10 10 255 18 ctx_lh_G_insular_short 225 140 140 255 19 ctx_lh_G_occipital_middle 180 60 180 255 20 ctx_lh_G_occipital_sup 20 220 60 255 21 ctx_lh_G_oc-temp_lat-fusifor 60 20 140 255 22 ctx_lh_G_oc-temp_med-Lingual 220 180 140 255 23 ctx_lh_G_oc-temp_med-Parahip 65 100 20 255 24 ctx_lh_G_orbital 220 60 20 255 25 ctx_lh_G_pariet_inf-Angular 20 60 220 255 26 ctx_lh_G_pariet_inf-Supramar 100 100 60 255 27 ctx_lh_G_parietal_sup 220 180 220 255 28 ctx_lh_G_postcentral 20 180 140 255 29 ctx_lh_G_precentral 60 140 180 255 30 ctx_lh_G_precuneus 25 20 140 255 31 ctx_lh_G_rectus 20 60 100 255 32 ctx_lh_G_subcallosal 60 220 20 255 33 ctx_lh_G_temp_sup-G_T_transv 60 60 220 255 34 ctx_lh_G_temp_sup-Lateral 220 60 220 255 35 ctx_lh_G_temp_sup-Plan_polar 65 220 60 255 36 ctx_lh_G_temp_sup-Plan_tempo 25 140 20 255 37 ctx_lh_G_temporal_inf 220 220 100 255 38 ctx_lh_G_temporal_middle 180 60 60 255 39 ctx_lh_Lat_Fis-ant-Horizont 61 20 220 255 40 ctx_lh_Lat_Fis-ant-Vertical 61 20 60 255 41 ctx_lh_Lat_Fis-post 61 60 100 255 42 ctx_lh_Pole_occipital 140 20 60 255 43 ctx_lh_Pole_temporal 220 180 20 255 44 ctx_lh_S_calcarine 63 180 180 255 45 ctx_lh_S_central 221 20 10 255 46 ctx_lh_S_cingul-Marginalis 221 20 100 255 47 ctx_lh_S_circular_insula_ant 221 60 140 255 48 ctx_lh_S_circular_insula_inf 221 20 220 255 49 ctx_lh_S_circular_insula_sup 61 220 220 255 50 ctx_lh_S_collat_transv_ant 100 200 200 255 51 ctx_lh_S_collat_transv_post 10 200 200 255 52 ctx_lh_S_front_inf 221 220 20 255 53 ctx_lh_S_front_middle 141 20 100 255 54 ctx_lh_S_front_sup 61 220 100 255 55 ctx_lh_S_interm_prim-Jensen 141 60 20 255 56 ctx_lh_S_intrapariet_and_P_trans 143 20 220 255 57 ctx_lh_S_oc_middle_and_Lunatus 101 60 220 255 58 ctx_lh_S_oc_sup_and_transversal 21 20 140 255 59 ctx_lh_S_occipital_ant 61 20 180 255 60 ctx_lh_S_oc-temp_lat 221 140 20 255 61 ctx_lh_S_oc-temp_med_and_Lingual 141 100 220 255 62 ctx_lh_S_orbital_lateral 221 100 20 255 63 ctx_lh_S_orbital_med-olfact 181 200 20 255 64 ctx_lh_S_orbital-H_Shaped 101 20 20 255 65 ctx_lh_S_parieto_occipital 101 100 180 255 66 ctx_lh_S_pericallosal 181 220 20 255 67 ctx_lh_S_postcentral 21 140 200 255 68 ctx_lh_S_precentral-inf-part 21 20 240 255 69 ctx_lh_S_precentral-sup-part 21 20 200 255 70 ctx_lh_S_suborbital 21 20 60 255 71 ctx_lh_S_subparietal 101 60 60 255 72 ctx_lh_S_temporal_inf 21 180 180 255 73 ctx_lh_S_temporal_sup 223 220 60 255 74 ctx_lh_S_temporal_transverse 221 60 60 255 75 Left-Cerebellum-Cortex 230 148 34 255 76 Left-Thalamus 0 118 14 255 76 Left-Thalamus-Proper 0 118 14 255 77 Left-Caudate 122 186 220 255 78 Left-Putamen 236 13 176 255 79 Left-Pallidum 12 48 255 255 80 Left-Hippocampus 220 216 20 255 81 Left-Amygdala 103 255 255 255 82 Left-Accumbens-area 255 165 0 255 83 Right-Thalamus 0 118 14 255 83 Right-Thalamus-Proper 0 118 14 255 84 Right-Caudate 122 186 220 255 85 Right-Putamen 236 13 176 255 86 Right-Pallidum 13 48 255 255 87 Right-Hippocampus 220 216 20 255 88 Right-Amygdala 103 255 255 255 89 Right-Accumbens-area 255 165 0 255 90 ctx_rh_G_and_S_frontomargin 23 220 60 255 91 ctx_rh_G_and_S_occipital_inf 23 60 180 255 92 ctx_rh_G_and_S_paracentral 63 100 60 255 93 ctx_rh_G_and_S_subcentral 63 20 220 255 94 ctx_rh_G_and_S_transv_frontopol 13 0 250 255 95 ctx_rh_G_and_S_cingul-Ant 26 60 0 255 96 ctx_rh_G_and_S_cingul-Mid-Ant 26 60 75 255 97 ctx_rh_G_and_S_cingul-Mid-Post 26 60 150 255 98 ctx_rh_G_cingul-Post-dorsal 25 60 250 255 99 ctx_rh_G_cingul-Post-ventral 60 25 25 255 100 ctx_rh_G_cuneus 180 20 20 255 101 ctx_rh_G_front_inf-Opercular 220 20 100 255 102 ctx_rh_G_front_inf-Orbital 140 60 60 255 103 ctx_rh_G_front_inf-Triangul 180 220 140 255 104 ctx_rh_G_front_middle 140 100 180 255 105 ctx_rh_G_front_sup 180 20 140 255 106 ctx_rh_G_Ins_lg_and_S_cent_ins 23 10 10 255 107 ctx_rh_G_insular_short 225 140 140 255 108 ctx_rh_G_occipital_middle 180 60 180 255 109 ctx_rh_G_occipital_sup 20 220 60 255 110 ctx_rh_G_oc-temp_lat-fusifor 60 20 140 255 111 ctx_rh_G_oc-temp_med-Lingual 220 180 140 255 112 ctx_rh_G_oc-temp_med-Parahip 65 100 20 255 113 ctx_rh_G_orbital 220 60 20 255 114 ctx_rh_G_pariet_inf-Angular 20 60 220 255 115 ctx_rh_G_pariet_inf-Supramar 100 100 60 255 116 ctx_rh_G_parietal_sup 220 180 220 255 117 ctx_rh_G_postcentral 20 180 140 255 118 ctx_rh_G_precentral 60 140 180 255 119 ctx_rh_G_precuneus 25 20 140 255 120 ctx_rh_G_rectus 20 60 100 255 121 ctx_rh_G_subcallosal 60 220 20 255 122 ctx_rh_G_temp_sup-G_T_transv 60 60 220 255 123 ctx_rh_G_temp_sup-Lateral 220 60 220 255 124 ctx_rh_G_temp_sup-Plan_polar 65 220 60 255 125 ctx_rh_G_temp_sup-Plan_tempo 25 140 20 255 126 ctx_rh_G_temporal_inf 220 220 100 255 127 ctx_rh_G_temporal_middle 180 60 60 255 128 ctx_rh_Lat_Fis-ant-Horizont 61 20 220 255 129 ctx_rh_Lat_Fis-ant-Vertical 61 20 60 255 130 ctx_rh_Lat_Fis-post 61 60 100 255 131 ctx_rh_Pole_occipital 140 20 60 255 132 ctx_rh_Pole_temporal 220 180 20 255 133 ctx_rh_S_calcarine 63 180 180 255 134 ctx_rh_S_central 221 20 10 255 135 ctx_rh_S_cingul-Marginalis 221 20 100 255 136 ctx_rh_S_circular_insula_ant 221 60 140 255 137 ctx_rh_S_circular_insula_inf 221 20 220 255 138 ctx_rh_S_circular_insula_sup 61 220 220 255 139 ctx_rh_S_collat_transv_ant 100 200 200 255 140 ctx_rh_S_collat_transv_post 10 200 200 255 141 ctx_rh_S_front_inf 221 220 20 255 142 ctx_rh_S_front_middle 141 20 100 255 143 ctx_rh_S_front_sup 61 220 100 255 144 ctx_rh_S_interm_prim-Jensen 141 60 20 255 145 ctx_rh_S_intrapariet_and_P_trans 143 20 220 255 146 ctx_rh_S_oc_middle_and_Lunatus 101 60 220 255 147 ctx_rh_S_oc_sup_and_transversal 21 20 140 255 148 ctx_rh_S_occipital_ant 61 20 180 255 149 ctx_rh_S_oc-temp_lat 221 140 20 255 150 ctx_rh_S_oc-temp_med_and_Lingual 141 100 220 255 151 ctx_rh_S_orbital_lateral 221 100 20 255 152 ctx_rh_S_orbital_med-olfact 181 200 20 255 153 ctx_rh_S_orbital-H_Shaped 101 20 20 255 154 ctx_rh_S_parieto_occipital 101 100 180 255 155 ctx_rh_S_pericallosal 181 220 20 255 156 ctx_rh_S_postcentral 21 140 200 255 157 ctx_rh_S_precentral-inf-part 21 20 240 255 158 ctx_rh_S_precentral-sup-part 21 20 200 255 159 ctx_rh_S_suborbital 21 20 60 255 160 ctx_rh_S_subparietal 101 60 60 255 161 ctx_rh_S_temporal_inf 21 180 180 255 162 ctx_rh_S_temporal_sup 223 220 60 255 163 ctx_rh_S_temporal_transverse 221 60 60 255 164 Right-Cerebellum-Cortex 230 148 34 255