{ "cells": [ { "cell_type": "code", "execution_count": 1, "metadata": { "collapsed": false, "deletable": true, "editable": true }, "outputs": [], "source": [] }, { "cell_type": "code", "execution_count": 1, "metadata": { "collapsed": true, "deletable": true, "editable": true }, "outputs": [], "source": [ "from clustergrammer_widget import *\n", "import process_CCLE\n", "net = Network()" ] }, { "cell_type": "code", "execution_count": 2, "metadata": { "collapsed": false, "deletable": true, "editable": true }, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "found categories \n" ] } ], "source": [ "ds_df = process_CCLE.quick_downsample(num_clusts=100)" ] }, { "cell_type": "code", "execution_count": 3, "metadata": { "collapsed": false }, "outputs": [ { "data": { "text/plain": [ "(18874, 100)" ] }, "execution_count": 3, "metadata": {}, "output_type": "execute_result" } ], "source": [ "ds_df.shape" ] }, { "cell_type": "code", "execution_count": null, "metadata": { "collapsed": true }, "outputs": [], "source": [] }, { "cell_type": "code", "execution_count": 18, "metadata": { "collapsed": false, "deletable": true, "editable": true }, "outputs": [ { "data": { "text/plain": [ "(18874, 100)" ] }, "execution_count": 18, "metadata": {}, "output_type": "execute_result" } ], "source": [ "net.load_file('../proc_data/inst_ds.txt')\n", "ccle = net.export_df()\n", "net.dat['mat'].shape" ] }, { "cell_type": "code", "execution_count": 14, "metadata": { "collapsed": false, "deletable": true, "editable": true }, "outputs": [], "source": [ "net.filter_N_top('row', 2000, rank_type='var')\n", "net.normalize(axis='row', norm_type='zscore', keep_orig=True)" ] }, { "cell_type": "code", "execution_count": 15, "metadata": { "collapsed": false, "deletable": true, "editable": true }, "outputs": [ { "data": { "text/plain": [ "(2000, 100)" ] }, "execution_count": 15, "metadata": {}, "output_type": "execute_result" } ], "source": [ "net.dat['mat'].shape" ] }, { "cell_type": "code", "execution_count": 16, "metadata": { "collapsed": true, "deletable": true, "editable": true }, "outputs": [], "source": [ "net.make_clust()" ] }, { "cell_type": "code", "execution_count": 17, "metadata": { "collapsed": false, "deletable": true, "editable": true }, "outputs": [ { "data": { "application/vnd.jupyter.widget-view+json": { "model_id": "9ca3f428c7b74d1aa8e5357de590af81" } }, "metadata": {}, "output_type": "display_data" } ], "source": [ "clustergrammer_widget(network=net.widget())" ] }, { "cell_type": "code", "execution_count": 20, "metadata": { "collapsed": false, "deletable": true, "editable": true }, "outputs": [ { "data": { "text/plain": [ "(18874, 100)" ] }, "execution_count": 20, "metadata": {}, "output_type": "execute_result" } ], "source": [] }, { "cell_type": "code", "execution_count": null, "metadata": { "collapsed": true, "deletable": true, "editable": true }, "outputs": [], "source": [] } ], "metadata": { "anaconda-cloud": {}, "kernelspec": { "display_name": "Python 2", "language": "python", "name": "python2" }, "language_info": { "codemirror_mode": { "name": "ipython", "version": 2 }, "file_extension": ".py", "mimetype": "text/x-python", "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython2", "version": "2.7.12" }, "widgets": { "application/vnd.jupyter.widget-state+json": { "state": { "00a1d2c08d714ec7906b5e2cf1aab859": { "model_module": "jupyter-js-widgets", "model_module_version": "*", "model_name": "LayoutModel", "state": { "_model_module_version": "*", "_view_module_version": "*" } }, "7f95ca0450a34760b389fab4d100f312": { "model_module": "clustergrammer_widget", "model_module_version": "*", "model_name": "hello_model", "state": { "_dom_classes": [], "_model_module_version": "*", "_view_module_version": "*", "layout": "IPY_MODEL_00a1d2c08d714ec7906b5e2cf1aab859", "msg_throttle": 1, "network": "{\"row_nodes\": [{\"group\": [1778.0, 1376.0, 596.0, 164.0, 27.0, 3.0, 1.0, 1.0, 1.0, 1.0, 1.0], 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22\", \"ini\": 45, \"cat-0\": \"Majority Tissue: autonomic_ganglia\", \"rankvar\": 24}, {\"group\": [13.0, 12.0, 9.0, 7.0, 4.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-6\", \"clust\": 2, \"cat_2_index\": 22, \"cat_1_index\": 36, \"cat_0_index\": 4, \"cat-2\": \"Max Pct: 0.852941176471\", \"rank\": 14, \"cat-1\": \"number in clust: 34\", \"ini\": 44, \"cat-0\": \"Majority Tissue: breast\", \"rankvar\": 11}, {\"group\": [27.0, 26.0, 19.0, 14.0, 10.0, 5.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-7\", \"clust\": 25, \"cat_2_index\": 8, \"cat_1_index\": 48, \"cat_0_index\": 30, \"cat-2\": \"Max Pct: 0.434210526316\", \"rank\": 38, \"cat-1\": \"number in clust: 76\", \"ini\": 43, \"cat-0\": \"Majority Tissue: lung\", \"rankvar\": 1}, {\"group\": [3.0, 3.0, 3.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-8\", \"clust\": 4, \"cat_2_index\": 23, \"cat_1_index\": 29, \"cat_0_index\": 25, \"cat-2\": \"Max Pct: 0.863636363636\", \"rank\": 29, \"cat-1\": \"number in clust: 22\", \"ini\": 42, \"cat-0\": \"Majority Tissue: large_intestine\", \"rankvar\": 30}, {\"group\": [16.0, 15.0, 12.0, 10.0, 6.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-9\", \"clust\": 14, \"cat_2_index\": 2, \"cat_1_index\": 32, \"cat_0_index\": 31, \"cat-2\": \"Max Pct: 0.241379310345\", \"rank\": 6, \"cat-1\": \"number in clust: 29\", \"ini\": 41, \"cat-0\": \"Majority Tissue: lung\", \"rankvar\": 2}, {\"group\": [21.0, 20.0, 17.0, 13.0, 9.0, 5.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-10\", \"clust\": 20, \"cat_2_index\": 27, \"cat_1_index\": 34, \"cat_0_index\": 43, \"cat-2\": \"Max Pct: 0.967741935484\", \"rank\": 24, \"cat-1\": \"number in clust: 31\", \"ini\": 40, \"cat-0\": \"Majority Tissue: skin\", \"rankvar\": 18}, {\"group\": [20.0, 19.0, 16.0, 12.0, 8.0, 4.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-11\", \"clust\": 17, \"cat_2_index\": 31, \"cat_1_index\": 1, \"cat_0_index\": 23, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 48, \"cat-1\": \"number in clust: 1\", \"ini\": 39, \"cat-0\": \"Majority Tissue: kidney\", \"rankvar\": 38}, {\"group\": [23.0, 22.0, 18.0, 14.0, 10.0, 5.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-12\", \"clust\": 26, \"cat_2_index\": 10, \"cat_1_index\": 17, \"cat_0_index\": 48, \"cat-2\": \"Max Pct: 0.5\", \"rank\": 46, \"cat-1\": \"number in clust: 4\", \"ini\": 38, \"cat-0\": \"Majority Tissue: thyroid\", \"rankvar\": 16}, {\"group\": [39.0, 37.0, 27.0, 19.0, 13.0, 7.0, 4.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-13\", \"clust\": 38, \"cat_2_index\": 32, \"cat_1_index\": 21, \"cat_0_index\": 2, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 12, \"cat-1\": \"number in clust: 9\", \"ini\": 37, \"cat-0\": \"Majority Tissue: bone\", \"rankvar\": 26}, {\"group\": [30.0, 29.0, 22.0, 16.0, 11.0, 5.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-14\", \"clust\": 22, \"cat_2_index\": 33, \"cat_1_index\": 9, \"cat_0_index\": 8, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 33, \"cat-1\": \"number in clust: 2\", \"ini\": 36, \"cat-0\": \"Majority Tissue: central_nervous_system\", \"rankvar\": 34}, {\"group\": [47.0, 45.0, 34.0, 24.0, 16.0, 8.0, 4.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-15\", \"clust\": 48, \"cat_2_index\": 18, \"cat_1_index\": 20, \"cat_0_index\": 32, \"cat-2\": \"Max Pct: 0.75\", \"rank\": 25, \"cat-1\": \"number in clust: 8\", \"ini\": 35, \"cat-0\": \"Majority Tissue: lung\", \"rankvar\": 23}, {\"group\": [8.0, 7.0, 5.0, 4.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-16\", \"clust\": 10, \"cat_2_index\": 15, \"cat_1_index\": 45, \"cat_0_index\": 49, \"cat-2\": \"Max Pct: 0.586956521739\", \"rank\": 47, \"cat-1\": \"number in clust: 46\", \"ini\": 34, \"cat-0\": \"Majority Tissue: upper_aerodigestive_tract\", \"rankvar\": 14}, {\"group\": [45.0, 43.0, 32.0, 23.0, 15.0, 8.0, 4.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-17\", \"clust\": 45, \"cat_2_index\": 11, \"cat_1_index\": 10, \"cat_0_index\": 13, \"cat-2\": \"Max Pct: 0.5\", \"rank\": 10, \"cat-1\": \"number in clust: 2\", \"ini\": 33, \"cat-0\": \"Majority Tissue: endometrium\", \"rankvar\": 43}, {\"group\": [1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-18\", \"clust\": 0, \"cat_2_index\": 21, \"cat_1_index\": 23, \"cat_0_index\": 28, \"cat-2\": \"Max Pct: 0.846153846154\", \"rank\": 27, \"cat-1\": \"number in clust: 13\", \"ini\": 32, \"cat-0\": \"Majority Tissue: liver\", \"rankvar\": 15}, {\"group\": [14.0, 13.0, 10.0, 8.0, 5.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-19\", \"clust\": 15, \"cat_2_index\": 12, \"cat_1_index\": 11, \"cat_0_index\": 14, \"cat-2\": \"Max Pct: 0.5\", \"rank\": 16, \"cat-1\": \"number in clust: 2\", \"ini\": 31, \"cat-0\": \"Majority Tissue: endometrium\", \"rankvar\": 13}, {\"group\": [9.0, 8.0, 5.0, 4.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-20\", 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\"cat_1_index\": 11, \"cat_0_index\": 14, \"cat-2\": \"Max Pct: 0.5\", \"rank\": 35, \"cat-1\": \"number in clust: 2\", \"ini\": 31, \"cat-0\": \"Majority Tissue: endometrium\", \"rankvar\": 11}, {\"group\": [6.0, 5.0, 4.0, 3.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-20\", \"clust\": 6, \"cat_2_index\": 19, \"cat_1_index\": 18, \"cat_0_index\": 46, \"cat-2\": \"Max Pct: 0.75\", \"rank\": 26, \"cat-1\": \"number in clust: 4\", \"ini\": 30, \"cat-0\": \"Majority Tissue: stomach\", \"rankvar\": 9}, {\"group\": [19.0, 16.0, 12.0, 9.0, 4.0, 2.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-21\", \"clust\": 22, \"cat_2_index\": 17, \"cat_1_index\": 49, \"cat_0_index\": 9, \"cat-2\": \"Max Pct: 0.666666666667\", \"rank\": 39, \"cat-1\": \"number in clust: 78\", \"ini\": 29, \"cat-0\": \"Majority Tissue: central_nervous_system\", \"rankvar\": 10}, {\"group\": [32.0, 27.0, 19.0, 14.0, 6.0, 4.0, 3.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-22\", 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\"cat_0_index\": 32, \"cat-2\": \"Max Pct: 0.75\", \"rank\": 26, \"cat-1\": \"number in clust: 8\", \"ini\": 35, \"cat-0\": \"Majority Tissue: lung\", \"rankvar\": 11}, {\"group\": [42.0, 30.0, 17.0, 11.0, 6.0, 4.0, 3.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-16\", \"clust\": 45, \"cat_2_index\": 15, \"cat_1_index\": 45, \"cat_0_index\": 49, \"cat-2\": \"Max Pct: 0.586956521739\", \"rank\": 21, \"cat-1\": \"number in clust: 46\", \"ini\": 34, \"cat-0\": \"Majority Tissue: upper_aerodigestive_tract\", \"rankvar\": 12}, {\"group\": [16.0, 9.0, 5.0, 4.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-17\", \"clust\": 17, \"cat_2_index\": 11, \"cat_1_index\": 10, \"cat_0_index\": 13, \"cat-2\": \"Max Pct: 0.5\", \"rank\": 39, \"cat-1\": \"number in clust: 2\", \"ini\": 33, \"cat-0\": \"Majority Tissue: endometrium\", \"rankvar\": 47}, {\"group\": [50.0, 34.0, 19.0, 11.0, 6.0, 4.0, 3.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-18\", \"clust\": 37, \"cat_2_index\": 21, \"cat_1_index\": 23, \"cat_0_index\": 28, \"cat-2\": \"Max Pct: 0.846153846154\", \"rank\": 20, \"cat-1\": \"number in clust: 13\", \"ini\": 32, \"cat-0\": \"Majority Tissue: liver\", \"rankvar\": 7}, {\"group\": [31.0, 21.0, 11.0, 7.0, 5.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-19\", \"clust\": 22, \"cat_2_index\": 12, \"cat_1_index\": 11, \"cat_0_index\": 14, \"cat-2\": \"Max Pct: 0.5\", \"rank\": 35, \"cat-1\": \"number in clust: 2\", \"ini\": 31, \"cat-0\": \"Majority Tissue: endometrium\", \"rankvar\": 6}, {\"group\": [45.0, 30.0, 17.0, 11.0, 6.0, 4.0, 3.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-20\", \"clust\": 43, \"cat_2_index\": 19, \"cat_1_index\": 18, \"cat_0_index\": 46, \"cat-2\": \"Max Pct: 0.75\", \"rank\": 18, \"cat-1\": \"number in clust: 4\", \"ini\": 30, \"cat-0\": \"Majority Tissue: stomach\", \"rankvar\": 22}, {\"group\": [27.0, 18.0, 10.0, 7.0, 5.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: 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cluster-7\", \"clust\": 10, \"cat_2_index\": 8, \"cat_1_index\": 48, \"cat_0_index\": 30, \"cat-2\": \"Max Pct: 0.434210526316\", \"rank\": 42, \"cat-1\": \"number in clust: 76\", \"ini\": 43, \"cat-0\": \"Majority Tissue: lung\", \"rankvar\": 0}, {\"group\": [42.0, 24.0, 12.0, 7.0, 5.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-8\", \"clust\": 45, \"cat_2_index\": 23, \"cat_1_index\": 29, \"cat_0_index\": 25, \"cat-2\": \"Max Pct: 0.863636363636\", \"rank\": 9, \"cat-1\": \"number in clust: 22\", \"ini\": 42, \"cat-0\": \"Majority Tissue: large_intestine\", \"rankvar\": 41}, {\"group\": [1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-9\", \"clust\": 0, \"cat_2_index\": 2, \"cat_1_index\": 32, \"cat_0_index\": 31, \"cat-2\": \"Max Pct: 0.241379310345\", \"rank\": 15, \"cat-1\": \"number in clust: 29\", \"ini\": 41, \"cat-0\": \"Majority Tissue: lung\", \"rankvar\": 3}, {\"group\": [3.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-10\", \"clust\": 3, \"cat_2_index\": 27, \"cat_1_index\": 34, \"cat_0_index\": 43, \"cat-2\": \"Max Pct: 0.967741935484\", \"rank\": 12, \"cat-1\": \"number in clust: 31\", \"ini\": 40, \"cat-0\": \"Majority Tissue: skin\", \"rankvar\": 19}, {\"group\": [37.0, 22.0, 11.0, 6.0, 5.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-11\", \"clust\": 34, \"cat_2_index\": 31, \"cat_1_index\": 1, \"cat_0_index\": 23, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 29, \"cat-1\": \"number in clust: 1\", \"ini\": 39, \"cat-0\": \"Majority Tissue: kidney\", \"rankvar\": 27}, {\"group\": [19.0, 11.0, 6.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-12\", \"clust\": 20, \"cat_2_index\": 10, \"cat_1_index\": 17, \"cat_0_index\": 48, \"cat-2\": \"Max Pct: 0.5\", \"rank\": 49, \"cat-1\": \"number in clust: 4\", \"ini\": 38, \"cat-0\": \"Majority Tissue: thyroid\", \"rankvar\": 21}, {\"group\": [22.0, 13.0, 7.0, 3.0, 2.0, 1.0, 1.0, 1.0, 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2.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-16\", \"clust\": 48, \"cat_2_index\": 15, \"cat_1_index\": 45, \"cat_0_index\": 49, \"cat-2\": \"Max Pct: 0.586956521739\", \"rank\": 21, \"cat-1\": \"number in clust: 46\", \"ini\": 34, \"cat-0\": \"Majority Tissue: upper_aerodigestive_tract\", \"rankvar\": 14}, {\"group\": [7.0, 5.0, 4.0, 2.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-17\", \"clust\": 7, \"cat_2_index\": 11, \"cat_1_index\": 10, \"cat_0_index\": 13, \"cat-2\": \"Max Pct: 0.5\", \"rank\": 30, \"cat-1\": \"number in clust: 2\", \"ini\": 33, \"cat-0\": \"Majority Tissue: endometrium\", \"rankvar\": 39}, {\"group\": [50.0, 27.0, 14.0, 7.0, 5.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-18\", \"clust\": 37, \"cat_2_index\": 21, \"cat_1_index\": 23, \"cat_0_index\": 28, \"cat-2\": \"Max Pct: 0.846153846154\", \"rank\": 22, \"cat-1\": \"number in clust: 13\", \"ini\": 32, \"cat-0\": \"Majority Tissue: liver\", \"rankvar\": 12}, {\"group\": [15.0, 10.0, 6.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-19\", \"clust\": 14, \"cat_2_index\": 12, \"cat_1_index\": 11, \"cat_0_index\": 14, \"cat-2\": \"Max Pct: 0.5\", \"rank\": 31, \"cat-1\": \"number in clust: 2\", \"ini\": 31, \"cat-0\": \"Majority Tissue: endometrium\", \"rankvar\": 9}, {\"group\": [38.0, 23.0, 12.0, 7.0, 5.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-20\", \"clust\": 40, \"cat_2_index\": 19, \"cat_1_index\": 18, \"cat_0_index\": 46, \"cat-2\": \"Max Pct: 0.75\", \"rank\": 25, \"cat-1\": \"number in clust: 4\", \"ini\": 30, \"cat-0\": \"Majority Tissue: stomach\", \"rankvar\": 33}, {\"group\": [18.0, 11.0, 6.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-21\", \"clust\": 17, \"cat_2_index\": 17, \"cat_1_index\": 49, \"cat_0_index\": 9, \"cat-2\": \"Max Pct: 0.666666666667\", \"rank\": 44, \"cat-1\": \"number in clust: 78\", \"ini\": 29, \"cat-0\": \"Majority Tissue: 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\"cat-0\": \"Majority Tissue: haematopoietic_and_lymphoid_tissue\", \"rankvar\": 39}, {\"group\": [37.0, 34.0, 25.0, 17.0, 12.0, 5.0, 3.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-25\", \"clust\": 36, \"cat_2_index\": 36, \"cat_1_index\": 33, \"cat_0_index\": 19, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 1, \"cat-1\": \"number in clust: 30\", \"ini\": 25, \"cat-0\": \"Majority Tissue: haematopoietic_and_lymphoid_tissue\", \"rankvar\": 27}, {\"group\": [26.0, 24.0, 17.0, 12.0, 9.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-26\", \"clust\": 30, \"cat_2_index\": 1, \"cat_1_index\": 42, \"cat_0_index\": 3, \"cat-2\": \"Max Pct: 0.19512195122\", \"rank\": 47, \"cat-1\": \"number in clust: 41\", \"ini\": 24, \"cat-0\": \"Majority Tissue: bone\", \"rankvar\": 28}, {\"group\": [19.0, 18.0, 13.0, 10.0, 7.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-27\", \"clust\": 20, \"cat_2_index\": 24, \"cat_1_index\": 38, \"cat_0_index\": 24, \"cat-2\": \"Max Pct: 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[36.0, 33.0, 28.0, 21.0, 12.0, 6.0, 3.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"GULP1\", \"clust\": 33, \"rank\": 6, \"ini\": 8, \"rankvar\": 7}, {\"group\": [21.0, 21.0, 18.0, 14.0, 8.0, 4.0, 3.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"ABCB1\", \"clust\": 20, \"rank\": 37, \"ini\": 7, \"rankvar\": 6}, {\"group\": [47.0, 44.0, 36.0, 26.0, 13.0, 6.0, 3.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"SELM\", \"clust\": 49, \"rank\": 13, \"ini\": 6, \"rankvar\": 5}, {\"group\": [31.0, 28.0, 24.0, 18.0, 9.0, 4.0, 3.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"HOXA10\", \"clust\": 30, \"rank\": 18, \"ini\": 5, \"rankvar\": 4}, {\"group\": [33.0, 30.0, 26.0, 20.0, 11.0, 5.0, 3.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"GSTT1\", \"clust\": 32, \"rank\": 8, \"ini\": 4, \"rankvar\": 3}, {\"group\": [5.0, 5.0, 4.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"EVI2B\", \"clust\": 7, \"rank\": 23, \"ini\": 3, \"rankvar\": 2}, {\"group\": [24.0, 24.0, 21.0, 15.0, 9.0, 4.0, 3.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"RNASE4\", \"clust\": 21, \"rank\": 16, \"ini\": 2, \"rankvar\": 1}, {\"group\": [27.0, 25.0, 22.0, 16.0, 9.0, 4.0, 3.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"MARVELD2\", \"clust\": 24, \"rank\": 44, \"ini\": 1, \"rankvar\": 0}], \"col_nodes\": [{\"group\": [27.0, 25.0, 18.0, 10.0, 7.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-0\", \"clust\": 25, \"cat_2_index\": 28, \"cat_1_index\": 0, \"cat_0_index\": 7, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 34, \"cat-1\": \"number in clust: 1\", \"ini\": 50, \"cat-0\": \"Majority Tissue: central_nervous_system\", \"rankvar\": 39}, {\"group\": [17.0, 15.0, 11.0, 7.0, 4.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-1\", \"clust\": 18, \"cat_2_index\": 3, \"cat_1_index\": 24, \"cat_0_index\": 12, \"cat-2\": \"Max Pct: 0.357142857143\", \"rank\": 43, \"cat-1\": \"number in clust: 14\", \"ini\": 49, \"cat-0\": \"Majority Tissue: endometrium\", \"rankvar\": 7}, {\"group\": [13.0, 11.0, 8.0, 6.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-2\", \"clust\": 14, \"cat_2_index\": 6, \"cat_1_index\": 31, \"cat_0_index\": 29, \"cat-2\": \"Max Pct: 0.392857142857\", \"rank\": 33, \"cat-1\": \"number in clust: 28\", \"ini\": 48, \"cat-0\": \"Majority Tissue: lung\", \"rankvar\": 4}, {\"group\": [37.0, 35.0, 24.0, 15.0, 11.0, 6.0, 3.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-3\", \"clust\": 36, \"cat_2_index\": 29, \"cat_1_index\": 40, \"cat_0_index\": 15, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 2, \"cat-1\": \"number in clust: 36\", \"ini\": 47, \"cat-0\": \"Majority Tissue: haematopoietic_and_lymphoid_tissue\", \"rankvar\": 23}, {\"group\": [39.0, 37.0, 25.0, 15.0, 11.0, 6.0, 3.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-4\", \"clust\": 39, \"cat_2_index\": 30, \"cat_1_index\": 27, \"cat_0_index\": 16, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 12, \"cat-1\": \"number in clust: 20\", \"ini\": 46, \"cat-0\": \"Majority Tissue: haematopoietic_and_lymphoid_tissue\", \"rankvar\": 42}, {\"group\": [42.0, 40.0, 26.0, 16.0, 12.0, 7.0, 3.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-5\", \"clust\": 43, \"cat_2_index\": 9, \"cat_1_index\": 28, \"cat_0_index\": 0, \"cat-2\": \"Max Pct: 0.5\", \"rank\": 10, \"cat-1\": \"number in clust: 22\", \"ini\": 45, \"cat-0\": \"Majority Tissue: autonomic_ganglia\", \"rankvar\": 21}, {\"group\": [1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-6\", \"clust\": 0, \"cat_2_index\": 22, \"cat_1_index\": 36, \"cat_0_index\": 4, \"cat-2\": \"Max Pct: 0.852941176471\", \"rank\": 13, \"cat-1\": \"number in clust: 34\", \"ini\": 44, \"cat-0\": \"Majority Tissue: breast\", \"rankvar\": 14}, {\"group\": [20.0, 18.0, 13.0, 8.0, 5.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-7\", \"clust\": 20, \"cat_2_index\": 8, \"cat_1_index\": 48, \"cat_0_index\": 30, \"cat-2\": \"Max Pct: 0.434210526316\", \"rank\": 40, \"cat-1\": \"number in clust: 76\", \"ini\": 43, \"cat-0\": \"Majority Tissue: lung\", \"rankvar\": 1}, {\"group\": [7.0, 7.0, 6.0, 5.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-8\", \"clust\": 7, \"cat_2_index\": 23, \"cat_1_index\": 29, \"cat_0_index\": 25, \"cat-2\": \"Max Pct: 0.863636363636\", \"rank\": 35, \"cat-1\": \"number in clust: 22\", \"ini\": 42, \"cat-0\": \"Majority Tissue: large_intestine\", \"rankvar\": 31}, {\"group\": [49.0, 47.0, 32.0, 19.0, 14.0, 8.0, 3.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-9\", \"clust\": 48, \"cat_2_index\": 2, \"cat_1_index\": 32, \"cat_0_index\": 31, \"cat-2\": \"Max Pct: 0.241379310345\", \"rank\": 17, \"cat-1\": \"number in clust: 29\", \"ini\": 41, \"cat-0\": \"Majority Tissue: lung\", \"rankvar\": 5}, {\"group\": [28.0, 26.0, 19.0, 11.0, 7.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-10\", \"clust\": 31, \"cat_2_index\": 27, \"cat_1_index\": 34, \"cat_0_index\": 43, \"cat-2\": \"Max Pct: 0.967741935484\", \"rank\": 8, \"cat-1\": \"number in clust: 31\", \"ini\": 40, \"cat-0\": \"Majority Tissue: skin\", \"rankvar\": 6}, {\"group\": [19.0, 17.0, 12.0, 7.0, 4.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-11\", \"clust\": 17, \"cat_2_index\": 31, \"cat_1_index\": 1, \"cat_0_index\": 23, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 49, \"cat-1\": \"number in clust: 1\", \"ini\": 39, \"cat-0\": \"Majority Tissue: kidney\", \"rankvar\": 38}, {\"group\": [23.0, 21.0, 16.0, 10.0, 7.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-12\", \"clust\": 26, \"cat_2_index\": 10, \"cat_1_index\": 17, \"cat_0_index\": 48, \"cat-2\": \"Max Pct: 0.5\", \"rank\": 36, \"cat-1\": \"number in clust: 4\", \"ini\": 38, \"cat-0\": \"Majority Tissue: thyroid\", \"rankvar\": 9}, {\"group\": [50.0, 48.0, 33.0, 20.0, 15.0, 8.0, 3.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-13\", \"clust\": 49, \"cat_2_index\": 32, \"cat_1_index\": 21, \"cat_0_index\": 2, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 7, \"cat-1\": \"number in clust: 9\", \"ini\": 37, \"cat-0\": \"Majority Tissue: bone\", \"rankvar\": 33}, {\"group\": [30.0, 28.0, 20.0, 11.0, 7.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-14\", \"clust\": 30, \"cat_2_index\": 33, \"cat_1_index\": 9, \"cat_0_index\": 8, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 31, \"cat-1\": \"number in clust: 2\", \"ini\": 36, \"cat-0\": \"Majority Tissue: central_nervous_system\", \"rankvar\": 47}, {\"group\": [3.0, 3.0, 3.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-15\", \"clust\": 4, \"cat_2_index\": 18, \"cat_1_index\": 20, \"cat_0_index\": 32, \"cat-2\": \"Max Pct: 0.75\", \"rank\": 38, \"cat-1\": \"number in clust: 8\", \"ini\": 35, \"cat-0\": \"Majority Tissue: lung\", \"rankvar\": 29}, {\"group\": [11.0, 10.0, 8.0, 6.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-16\", \"clust\": 15, \"cat_2_index\": 15, \"cat_1_index\": 45, \"cat_0_index\": 49, \"cat-2\": \"Max Pct: 0.586956521739\", \"rank\": 48, \"cat-1\": \"number in clust: 46\", \"ini\": 34, \"cat-0\": \"Majority Tissue: upper_aerodigestive_tract\", \"rankvar\": 19}, {\"group\": [44.0, 42.0, 27.0, 16.0, 12.0, 7.0, 3.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-17\", \"clust\": 42, \"cat_2_index\": 11, \"cat_1_index\": 10, \"cat_0_index\": 13, \"cat-2\": \"Max Pct: 0.5\", \"rank\": 15, \"cat-1\": \"number in clust: 2\", \"ini\": 33, \"cat-0\": \"Majority Tissue: endometrium\", \"rankvar\": 44}, {\"group\": [5.0, 5.0, 4.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-18\", \"clust\": 3, \"cat_2_index\": 21, \"cat_1_index\": 23, \"cat_0_index\": 28, \"cat-2\": \"Max Pct: 0.846153846154\", \"rank\": 32, \"cat-1\": \"number in clust: 13\", \"ini\": 32, \"cat-0\": \"Majority Tissue: liver\", \"rankvar\": 12}, {\"group\": [22.0, 20.0, 15.0, 9.0, 6.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-19\", \"clust\": 6, \"cat_2_index\": 12, \"cat_1_index\": 11, \"cat_0_index\": 14, \"cat-2\": \"Max Pct: 0.5\", \"rank\": 21, \"cat-1\": \"number in clust: 2\", \"ini\": 31, \"cat-0\": \"Majority Tissue: endometrium\", \"rankvar\": 20}, {\"group\": [14.0, 12.0, 8.0, 6.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-20\", \"clust\": 13, \"cat_2_index\": 19, \"cat_1_index\": 18, \"cat_0_index\": 46, \"cat-2\": \"Max Pct: 0.75\", \"rank\": 41, \"cat-1\": \"number in clust: 4\", \"ini\": 30, \"cat-0\": \"Majority Tissue: stomach\", \"rankvar\": 13}, {\"group\": [25.0, 23.0, 17.0, 10.0, 7.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-21\", \"clust\": 28, \"cat_2_index\": 17, \"cat_1_index\": 49, \"cat_0_index\": 9, \"cat-2\": \"Max Pct: 0.666666666667\", \"rank\": 30, \"cat-1\": \"number in clust: 78\", \"ini\": 29, \"cat-0\": \"Majority Tissue: central_nervous_system\", \"rankvar\": 10}, {\"group\": [38.0, 36.0, 24.0, 15.0, 11.0, 6.0, 3.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-22\", \"clust\": 37, \"cat_2_index\": 34, \"cat_1_index\": 22, \"cat_0_index\": 17, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 6, \"cat-1\": \"number in clust: 10\", \"ini\": 28, \"cat-0\": \"Majority Tissue: haematopoietic_and_lymphoid_tissue\", \"rankvar\": 32}, {\"group\": [9.0, 8.0, 7.0, 5.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-23\", \"clust\": 9, \"cat_2_index\": 20, \"cat_1_index\": 19, \"cat_0_index\": 40, \"cat-2\": \"Max Pct: 0.75\", \"rank\": 45, \"cat-1\": \"number in clust: 4\", \"ini\": 27, \"cat-0\": \"Majority Tissue: pancreas\", \"rankvar\": 34}, {\"group\": [40.0, 38.0, 25.0, 15.0, 11.0, 6.0, 3.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-24\", \"clust\": 40, \"cat_2_index\": 35, \"cat_1_index\": 30, \"cat_0_index\": 18, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 9, \"cat-1\": \"number in clust: 26\", \"ini\": 26, \"cat-0\": \"Majority Tissue: haematopoietic_and_lymphoid_tissue\", \"rankvar\": 40}, {\"group\": [34.0, 32.0, 24.0, 15.0, 11.0, 6.0, 3.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-25\", \"clust\": 34, \"cat_2_index\": 36, \"cat_1_index\": 33, \"cat_0_index\": 19, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 4, \"cat-1\": \"number in clust: 30\", \"ini\": 25, \"cat-0\": \"Majority Tissue: haematopoietic_and_lymphoid_tissue\", \"rankvar\": 18}, {\"group\": [26.0, 24.0, 17.0, 10.0, 7.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-26\", \"clust\": 29, \"cat_2_index\": 1, \"cat_1_index\": 42, \"cat_0_index\": 3, \"cat-2\": \"Max Pct: 0.19512195122\", \"rank\": 47, \"cat-1\": \"number in clust: 41\", \"ini\": 24, \"cat-0\": \"Majority Tissue: bone\", \"rankvar\": 28}, {\"group\": [18.0, 16.0, 11.0, 7.0, 4.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-27\", \"clust\": 19, \"cat_2_index\": 24, \"cat_1_index\": 38, \"cat_0_index\": 24, \"cat-2\": \"Max Pct: 0.885714285714\", \"rank\": 44, \"cat-1\": \"number in clust: 35\", \"ini\": 23, \"cat-0\": \"Majority Tissue: kidney\", \"rankvar\": 17}, {\"group\": [33.0, 31.0, 23.0, 14.0, 10.0, 5.0, 2.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-28\", \"clust\": 22, \"cat_2_index\": 37, \"cat_1_index\": 2, \"cat_0_index\": 41, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 16, \"cat-1\": \"number in clust: 1\", \"ini\": 22, \"cat-0\": \"Majority Tissue: pancreas\", \"rankvar\": 37}, {\"group\": [21.0, 19.0, 14.0, 8.0, 5.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-29\", \"clust\": 21, \"cat_2_index\": 5, \"cat_1_index\": 43, \"cat_0_index\": 33, \"cat-2\": \"Max Pct: 0.390243902439\", \"rank\": 23, \"cat-1\": \"number in clust: 41\", \"ini\": 21, \"cat-0\": \"Majority Tissue: lung\", \"rankvar\": 0}, {\"group\": [15.0, 13.0, 9.0, 6.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-30\", \"clust\": 12, \"cat_2_index\": 13, \"cat_1_index\": 12, \"cat_0_index\": 5, \"cat-2\": \"Max Pct: 0.5\", \"rank\": 26, \"cat-1\": \"number in clust: 2\", \"ini\": 20, \"cat-0\": \"Majority Tissue: breast\", \"rankvar\": 16}, {\"group\": [46.0, 44.0, 29.0, 17.0, 13.0, 7.0, 3.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-31\", \"clust\": 46, \"cat_2_index\": 26, \"cat_1_index\": 41, \"cat_0_index\": 34, \"cat-2\": \"Max Pct: 0.916666666667\", \"rank\": 24, \"cat-1\": \"number in clust: 36\", \"ini\": 19, \"cat-0\": \"Majority Tissue: lung\", \"rankvar\": 27}, {\"group\": [24.0, 22.0, 16.0, 10.0, 7.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-32\", \"clust\": 27, \"cat_2_index\": 0, \"cat_1_index\": 35, \"cat_0_index\": 10, \"cat-2\": \"Max Pct: 0.151515151515\", \"rank\": 22, \"cat-1\": \"number in clust: 33\", \"ini\": 18, \"cat-0\": \"Majority Tissue: central_nervous_system\", \"rankvar\": 2}, {\"group\": [43.0, 41.0, 26.0, 16.0, 12.0, 7.0, 3.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-33\", \"clust\": 44, \"cat_2_index\": 38, \"cat_1_index\": 13, \"cat_0_index\": 1, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 19, \"cat-1\": \"number in clust: 2\", \"ini\": 17, \"cat-0\": \"Majority Tissue: autonomic_ganglia\", \"rankvar\": 45}, {\"group\": [6.0, 6.0, 5.0, 4.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-34\", \"clust\": 2, \"cat_2_index\": 39, \"cat_1_index\": 3, \"cat_0_index\": 26, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 42, \"cat-1\": \"number in clust: 1\", \"ini\": 16, \"cat-0\": \"Majority Tissue: large_intestine\", \"rankvar\": 30}, {\"group\": [36.0, 34.0, 24.0, 15.0, 11.0, 6.0, 3.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-35\", \"clust\": 33, \"cat_2_index\": 40, \"cat_1_index\": 25, \"cat_0_index\": 20, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 0, \"cat-1\": \"number in clust: 17\", \"ini\": 15, \"cat-0\": \"Majority Tissue: haematopoietic_and_lymphoid_tissue\", \"rankvar\": 26}, {\"group\": [12.0, 10.0, 8.0, 6.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-36\", \"clust\": 16, \"cat_2_index\": 4, \"cat_1_index\": 46, \"cat_0_index\": 35, \"cat-2\": \"Max Pct: 0.362068965517\", \"rank\": 37, \"cat-1\": \"number in 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\"cat-1\": \"number in clust: 34\", \"ini\": 44, \"cat-0\": \"Majority Tissue: breast\", \"rankvar\": 6}, {\"group\": [24.0, 17.0, 11.0, 7.0, 4.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-7\", \"clust\": 22, \"cat_2_index\": 8, \"cat_1_index\": 48, \"cat_0_index\": 30, \"cat-2\": \"Max Pct: 0.434210526316\", \"rank\": 35, \"cat-1\": \"number in clust: 76\", \"ini\": 43, \"cat-0\": \"Majority Tissue: lung\", \"rankvar\": 1}, {\"group\": [17.0, 12.0, 8.0, 6.0, 4.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-8\", \"clust\": 17, \"cat_2_index\": 23, \"cat_1_index\": 29, \"cat_0_index\": 25, \"cat-2\": \"Max Pct: 0.863636363636\", \"rank\": 43, \"cat-1\": \"number in clust: 22\", \"ini\": 42, \"cat-0\": \"Majority Tissue: large_intestine\", \"rankvar\": 23}, {\"group\": [46.0, 35.0, 23.0, 14.0, 8.0, 5.0, 2.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-9\", \"clust\": 39, \"cat_2_index\": 2, \"cat_1_index\": 32, \"cat_0_index\": 31, \"cat-2\": \"Max 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\"cat-2\": \"Max Pct: 0.5\", \"rank\": 27, \"cat-1\": \"number in clust: 4\", \"ini\": 38, \"cat-0\": \"Majority Tissue: thyroid\", \"rankvar\": 4}, {\"group\": [34.0, 25.0, 16.0, 10.0, 5.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-13\", \"clust\": 25, \"cat_2_index\": 32, \"cat_1_index\": 21, \"cat_0_index\": 2, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 15, \"cat-1\": \"number in clust: 9\", \"ini\": 37, \"cat-0\": \"Majority Tissue: bone\", \"rankvar\": 37}, {\"group\": [42.0, 31.0, 20.0, 13.0, 8.0, 5.0, 2.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-14\", \"clust\": 42, \"cat_2_index\": 33, \"cat_1_index\": 9, \"cat_0_index\": 8, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 40, \"cat-1\": \"number in clust: 2\", \"ini\": 36, \"cat-0\": \"Majority Tissue: central_nervous_system\", \"rankvar\": 47}, {\"group\": [1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-15\", \"clust\": 4, \"cat_2_index\": 18, \"cat_1_index\": 20, \"cat_0_index\": 32, \"cat-2\": \"Max Pct: 0.75\", \"rank\": 42, \"cat-1\": \"number in clust: 8\", \"ini\": 35, \"cat-0\": \"Majority Tissue: lung\", \"rankvar\": 33}, {\"group\": [12.0, 8.0, 7.0, 6.0, 4.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-16\", \"clust\": 15, \"cat_2_index\": 15, \"cat_1_index\": 45, \"cat_0_index\": 49, \"cat-2\": \"Max Pct: 0.586956521739\", \"rank\": 45, \"cat-1\": \"number in clust: 46\", \"ini\": 34, \"cat-0\": \"Majority Tissue: upper_aerodigestive_tract\", \"rankvar\": 17}, {\"group\": [37.0, 27.0, 17.0, 11.0, 6.0, 4.0, 2.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-17\", \"clust\": 36, \"cat_2_index\": 11, \"cat_1_index\": 10, \"cat_0_index\": 13, \"cat-2\": \"Max Pct: 0.5\", \"rank\": 17, \"cat-1\": \"number in clust: 2\", \"ini\": 33, \"cat-0\": \"Majority Tissue: endometrium\", \"rankvar\": 49}, {\"group\": [20.0, 13.0, 9.0, 6.0, 4.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-18\", \"clust\": 19, \"cat_2_index\": 21, \"cat_1_index\": 23, \"cat_0_index\": 28, \"cat-2\": \"Max Pct: 0.846153846154\", \"rank\": 22, \"cat-1\": \"number in clust: 13\", \"ini\": 32, \"cat-0\": \"Majority Tissue: liver\", \"rankvar\": 10}, {\"group\": [25.0, 18.0, 12.0, 8.0, 4.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-19\", \"clust\": 21, \"cat_2_index\": 12, \"cat_1_index\": 11, \"cat_0_index\": 14, \"cat-2\": \"Max Pct: 0.5\", \"rank\": 21, \"cat-1\": \"number in clust: 2\", \"ini\": 31, \"cat-0\": \"Majority Tissue: endometrium\", \"rankvar\": 11}, {\"group\": [14.0, 9.0, 7.0, 6.0, 4.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-20\", \"clust\": 10, \"cat_2_index\": 19, \"cat_1_index\": 18, \"cat_0_index\": 46, \"cat-2\": \"Max Pct: 0.75\", \"rank\": 46, \"cat-1\": \"number in clust: 4\", \"ini\": 30, \"cat-0\": \"Majority Tissue: stomach\", \"rankvar\": 22}, {\"group\": [43.0, 32.0, 20.0, 13.0, 8.0, 5.0, 2.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-21\", \"clust\": 43, \"cat_2_index\": 17, \"cat_1_index\": 49, \"cat_0_index\": 9, \"cat-2\": \"Max Pct: 0.666666666667\", \"rank\": 24, \"cat-1\": \"number in clust: 78\", \"ini\": 29, \"cat-0\": \"Majority Tissue: central_nervous_system\", \"rankvar\": 18}, {\"group\": [32.0, 23.0, 14.0, 9.0, 5.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-22\", \"clust\": 31, \"cat_2_index\": 34, \"cat_1_index\": 22, \"cat_0_index\": 17, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 10, \"cat-1\": \"number in clust: 10\", \"ini\": 28, \"cat-0\": \"Majority Tissue: haematopoietic_and_lymphoid_tissue\", \"rankvar\": 36}, {\"group\": [19.0, 12.0, 8.0, 6.0, 4.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-23\", \"clust\": 16, \"cat_2_index\": 20, \"cat_1_index\": 19, \"cat_0_index\": 40, \"cat-2\": \"Max Pct: 0.75\", \"rank\": 41, \"cat-1\": \"number in clust: 4\", \"ini\": 27, \"cat-0\": \"Majority Tissue: pancreas\", \"rankvar\": 32}, {\"group\": [31.0, 22.0, 14.0, 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\"Majority Tissue: bone\", \"rankvar\": 35}, {\"group\": [8.0, 7.0, 6.0, 5.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-27\", \"clust\": 7, \"cat_2_index\": 24, \"cat_1_index\": 38, \"cat_0_index\": 24, \"cat-2\": \"Max Pct: 0.885714285714\", \"rank\": 23, \"cat-1\": \"number in clust: 35\", \"ini\": 23, \"cat-0\": \"Majority Tissue: kidney\", \"rankvar\": 14}, {\"group\": [50.0, 39.0, 26.0, 16.0, 9.0, 5.0, 2.0, 2.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-28\", \"clust\": 46, \"cat_2_index\": 37, \"cat_1_index\": 2, \"cat_0_index\": 41, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 19, \"cat-1\": \"number in clust: 1\", \"ini\": 22, \"cat-0\": \"Majority Tissue: pancreas\", \"rankvar\": 38}, {\"group\": [23.0, 16.0, 10.0, 7.0, 4.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-29\", \"clust\": 24, \"cat_2_index\": 5, \"cat_1_index\": 43, \"cat_0_index\": 33, \"cat-2\": \"Max Pct: 0.390243902439\", \"rank\": 18, \"cat-1\": \"number in clust: 41\", 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\"cat_0_index\": 12, \"cat-2\": \"Max Pct: 0.357142857143\", \"rank\": 37, \"cat-1\": \"number in clust: 14\", \"ini\": 49, \"cat-0\": \"Majority Tissue: endometrium\", \"rankvar\": 11}, {\"group\": [10.0, 5.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-2\", \"clust\": 12, \"cat_2_index\": 6, \"cat_1_index\": 31, \"cat_0_index\": 29, \"cat-2\": \"Max Pct: 0.392857142857\", \"rank\": 36, \"cat-1\": \"number in clust: 28\", \"ini\": 48, \"cat-0\": \"Majority Tissue: lung\", \"rankvar\": 13}, {\"group\": [45.0, 26.0, 14.0, 7.0, 4.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-3\", \"clust\": 43, \"cat_2_index\": 29, \"cat_1_index\": 40, \"cat_0_index\": 15, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 5, \"cat-1\": \"number in clust: 36\", \"ini\": 47, \"cat-0\": \"Majority Tissue: haematopoietic_and_lymphoid_tissue\", \"rankvar\": 5}, {\"group\": [40.0, 21.0, 12.0, 7.0, 4.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-4\", 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1.0], \"name\": \"Cluster: cluster-7\", \"clust\": 18, \"cat_2_index\": 8, \"cat_1_index\": 48, \"cat_0_index\": 30, \"cat-2\": \"Max Pct: 0.434210526316\", \"rank\": 35, \"cat-1\": \"number in clust: 76\", \"ini\": 43, \"cat-0\": \"Majority Tissue: lung\", \"rankvar\": 3}, {\"group\": [4.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-8\", \"clust\": 3, \"cat_2_index\": 23, \"cat_1_index\": 29, \"cat_0_index\": 25, \"cat-2\": \"Max Pct: 0.863636363636\", \"rank\": 46, \"cat-1\": \"number in clust: 22\", \"ini\": 42, \"cat-0\": \"Majority Tissue: large_intestine\", \"rankvar\": 33}, {\"group\": [35.0, 19.0, 10.0, 6.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-9\", \"clust\": 30, \"cat_2_index\": 2, \"cat_1_index\": 32, \"cat_0_index\": 31, \"cat-2\": \"Max Pct: 0.241379310345\", \"rank\": 26, \"cat-1\": \"number in clust: 29\", \"ini\": 41, \"cat-0\": \"Majority Tissue: lung\", \"rankvar\": 25}, {\"group\": [32.0, 18.0, 10.0, 6.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-10\", \"clust\": 34, \"cat_2_index\": 27, \"cat_1_index\": 34, \"cat_0_index\": 43, \"cat-2\": \"Max Pct: 0.967741935484\", \"rank\": 7, \"cat-1\": \"number in clust: 31\", \"ini\": 40, \"cat-0\": \"Majority Tissue: skin\", \"rankvar\": 10}, {\"group\": [20.0, 10.0, 5.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-11\", \"clust\": 19, \"cat_2_index\": 31, \"cat_1_index\": 1, \"cat_0_index\": 23, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 27, \"cat-1\": \"number in clust: 1\", \"ini\": 39, \"cat-0\": \"Majority Tissue: kidney\", \"rankvar\": 19}, {\"group\": [36.0, 20.0, 11.0, 6.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-12\", \"clust\": 29, \"cat_2_index\": 10, \"cat_1_index\": 17, \"cat_0_index\": 48, \"cat-2\": \"Max Pct: 0.5\", \"rank\": 21, \"cat-1\": \"number in clust: 4\", \"ini\": 38, \"cat-0\": \"Majority Tissue: thyroid\", \"rankvar\": 6}, {\"group\": [41.0, 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[11.0, 5.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-16\", \"clust\": 13, \"cat_2_index\": 15, \"cat_1_index\": 45, \"cat_0_index\": 49, \"cat-2\": \"Max Pct: 0.586956521739\", \"rank\": 40, \"cat-1\": \"number in clust: 46\", \"ini\": 34, \"cat-0\": \"Majority Tissue: upper_aerodigestive_tract\", \"rankvar\": 15}, {\"group\": [26.0, 15.0, 8.0, 5.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-17\", \"clust\": 23, \"cat_2_index\": 11, \"cat_1_index\": 10, \"cat_0_index\": 13, \"cat-2\": \"Max Pct: 0.5\", \"rank\": 12, \"cat-1\": \"number in clust: 2\", \"ini\": 33, \"cat-0\": \"Majority Tissue: endometrium\", \"rankvar\": 44}, {\"group\": [2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-18\", \"clust\": 2, \"cat_2_index\": 21, \"cat_1_index\": 23, \"cat_0_index\": 28, \"cat-2\": \"Max Pct: 0.846153846154\", \"rank\": 34, \"cat-1\": \"number in clust: 13\", \"ini\": 32, \"cat-0\": \"Majority Tissue: liver\", \"rankvar\": 7}, {\"group\": [8.0, 3.0, 2.0, 2.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-19\", \"clust\": 7, \"cat_2_index\": 12, \"cat_1_index\": 11, \"cat_0_index\": 14, \"cat-2\": \"Max Pct: 0.5\", \"rank\": 25, \"cat-1\": \"number in clust: 2\", \"ini\": 31, \"cat-0\": \"Majority Tissue: endometrium\", \"rankvar\": 23}, {\"group\": [14.0, 5.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-20\", \"clust\": 14, \"cat_2_index\": 19, \"cat_1_index\": 18, \"cat_0_index\": 46, \"cat-2\": \"Max Pct: 0.75\", \"rank\": 47, \"cat-1\": \"number in clust: 4\", \"ini\": 30, \"cat-0\": \"Majority Tissue: stomach\", \"rankvar\": 14}, {\"group\": [31.0, 17.0, 10.0, 6.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-21\", \"clust\": 32, \"cat_2_index\": 17, \"cat_1_index\": 49, \"cat_0_index\": 9, \"cat-2\": \"Max Pct: 0.666666666667\", \"rank\": 19, \"cat-1\": \"number in clust: 78\", \"ini\": 29, \"cat-0\": \"Majority Tissue: central_nervous_system\", \"rankvar\": 31}, {\"group\": [42.0, 23.0, 12.0, 7.0, 4.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-22\", \"clust\": 37, \"cat_2_index\": 34, \"cat_1_index\": 22, \"cat_0_index\": 17, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 22, \"cat-1\": \"number in clust: 10\", \"ini\": 28, \"cat-0\": \"Majority Tissue: haematopoietic_and_lymphoid_tissue\", \"rankvar\": 42}, {\"group\": [6.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-23\", \"clust\": 5, \"cat_2_index\": 20, \"cat_1_index\": 19, \"cat_0_index\": 40, \"cat-2\": \"Max Pct: 0.75\", \"rank\": 49, \"cat-1\": \"number in clust: 4\", \"ini\": 27, \"cat-0\": \"Majority Tissue: pancreas\", \"rankvar\": 28}, {\"group\": [37.0, 21.0, 12.0, 7.0, 4.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-24\", \"clust\": 41, \"cat_2_index\": 35, \"cat_1_index\": 30, \"cat_0_index\": 18, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 10, \"cat-1\": \"number in clust: 26\", \"ini\": 26, \"cat-0\": \"Majority Tissue: haematopoietic_and_lymphoid_tissue\", \"rankvar\": 41}, {\"group\": [39.0, 21.0, 12.0, 7.0, 4.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-25\", \"clust\": 40, \"cat_2_index\": 36, \"cat_1_index\": 33, \"cat_0_index\": 19, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 18, \"cat-1\": \"number in clust: 30\", \"ini\": 25, \"cat-0\": \"Majority Tissue: haematopoietic_and_lymphoid_tissue\", \"rankvar\": 40}, {\"group\": [34.0, 18.0, 10.0, 6.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-26\", \"clust\": 33, \"cat_2_index\": 1, \"cat_1_index\": 42, \"cat_0_index\": 3, \"cat-2\": \"Max Pct: 0.19512195122\", \"rank\": 14, \"cat-1\": \"number in clust: 41\", \"ini\": 24, \"cat-0\": \"Majority Tissue: bone\", \"rankvar\": 39}, {\"group\": [47.0, 28.0, 16.0, 9.0, 5.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-27\", \"clust\": 46, \"cat_2_index\": 24, \"cat_1_index\": 38, \"cat_0_index\": 24, \"cat-2\": \"Max Pct: 0.885714285714\", \"rank\": 20, \"cat-1\": \"number in clust: 35\", \"ini\": 23, \"cat-0\": \"Majority Tissue: kidney\", \"rankvar\": 12}, {\"group\": [48.0, 29.0, 16.0, 9.0, 5.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-28\", \"clust\": 47, \"cat_2_index\": 37, \"cat_1_index\": 2, \"cat_0_index\": 41, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 6, \"cat-1\": \"number in clust: 1\", \"ini\": 22, \"cat-0\": \"Majority Tissue: pancreas\", \"rankvar\": 26}, {\"group\": [9.0, 4.0, 2.0, 2.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-29\", \"clust\": 8, \"cat_2_index\": 5, \"cat_1_index\": 43, \"cat_0_index\": 33, \"cat-2\": \"Max Pct: 0.390243902439\", \"rank\": 28, \"cat-1\": \"number in clust: 41\", \"ini\": 21, \"cat-0\": \"Majority Tissue: lung\", \"rankvar\": 0}, {\"group\": [17.0, 7.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-30\", \"clust\": 9, \"cat_2_index\": 13, \"cat_1_index\": 12, \"cat_0_index\": 5, \"cat-2\": \"Max Pct: 0.5\", \"rank\": 43, \"cat-1\": \"number in clust: 2\", \"ini\": 20, \"cat-0\": \"Majority Tissue: breast\", \"rankvar\": 16}, {\"group\": [22.0, 12.0, 6.0, 4.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-31\", \"clust\": 21, \"cat_2_index\": 26, \"cat_1_index\": 41, \"cat_0_index\": 34, \"cat-2\": \"Max Pct: 0.916666666667\", \"rank\": 31, \"cat-1\": \"number in clust: 36\", \"ini\": 19, \"cat-0\": \"Majority Tissue: lung\", \"rankvar\": 18}, {\"group\": [29.0, 16.0, 9.0, 6.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-32\", \"clust\": 26, \"cat_2_index\": 0, \"cat_1_index\": 35, \"cat_0_index\": 10, \"cat-2\": \"Max Pct: 0.151515151515\", \"rank\": 15, \"cat-1\": \"number in clust: 33\", \"ini\": 18, \"cat-0\": \"Majority Tissue: central_nervous_system\", \"rankvar\": 8}, {\"group\": [25.0, 14.0, 8.0, 5.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-33\", \"clust\": 25, \"cat_2_index\": 38, \"cat_1_index\": 13, \"cat_0_index\": 1, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 16, \"cat-1\": \"number in clust: 2\", \"ini\": 17, \"cat-0\": \"Majority Tissue: autonomic_ganglia\", \"rankvar\": 27}, {\"group\": [7.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-34\", \"clust\": 6, \"cat_2_index\": 39, \"cat_1_index\": 3, \"cat_0_index\": 26, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 41, \"cat-1\": \"number in clust: 1\", \"ini\": 16, \"cat-0\": \"Majority Tissue: large_intestine\", \"rankvar\": 38}, {\"group\": [43.0, 24.0, 13.0, 7.0, 4.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-35\", \"clust\": 44, \"cat_2_index\": 40, \"cat_1_index\": 25, \"cat_0_index\": 20, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 1, \"cat-1\": \"number in clust: 17\", \"ini\": 15, \"cat-0\": \"Majority Tissue: haematopoietic_and_lymphoid_tissue\", \"rankvar\": 35}, {\"group\": [12.0, 5.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-36\", \"clust\": 15, \"cat_2_index\": 4, \"cat_1_index\": 46, \"cat_0_index\": 35, \"cat-2\": \"Max Pct: 0.362068965517\", \"rank\": 39, \"cat-1\": \"number in clust: 58\", \"ini\": 14, \"cat-0\": \"Majority Tissue: lung\", \"rankvar\": 20}, {\"group\": [49.0, 30.0, 17.0, 10.0, 6.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-37\", \"clust\": 48, \"cat_2_index\": 41, \"cat_1_index\": 4, \"cat_0_index\": 42, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 11, \"cat-1\": \"number in clust: 1\", \"ini\": 13, \"cat-0\": \"Majority Tissue: pleura\", \"rankvar\": 32}, {\"group\": [28.0, 16.0, 9.0, 6.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-38\", \"clust\": 28, \"cat_2_index\": 42, \"cat_1_index\": 15, \"cat_0_index\": 45, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 13, \"cat-1\": \"number in clust: 3\", \"ini\": 12, \"cat-0\": \"Majority Tissue: soft_tissue\", \"rankvar\": 36}, {\"group\": [16.0, 6.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-39\", \"clust\": 10, \"cat_2_index\": 16, \"cat_1_index\": 39, \"cat_0_index\": 39, \"cat-2\": \"Max Pct: 0.6\", \"rank\": 38, \"cat-1\": \"number in clust: 35\", \"ini\": 11, \"cat-0\": \"Majority Tissue: ovary\", \"rankvar\": 1}, {\"group\": [3.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-40\", \"clust\": 0, \"cat_2_index\": 43, \"cat_1_index\": 16, \"cat_0_index\": 36, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 45, \"cat-1\": \"number in clust: 3\", \"ini\": 10, \"cat-0\": \"Majority Tissue: lung\", \"rankvar\": 34}, {\"group\": [46.0, 27.0, 15.0, 8.0, 4.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-41\", \"clust\": 36, \"cat_2_index\": 44, \"cat_1_index\": 5, \"cat_0_index\": 21, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 2, \"cat-1\": \"number in clust: 1\", \"ini\": 9, \"cat-0\": \"Majority Tissue: haematopoietic_and_lymphoid_tissue\", \"rankvar\": 45}, {\"group\": [44.0, 25.0, 13.0, 7.0, 4.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-42\", \"clust\": 45, \"cat_2_index\": 45, \"cat_1_index\": 6, \"cat_0_index\": 11, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 0, \"cat-1\": \"number in clust: 1\", \"ini\": 8, \"cat-0\": \"Majority Tissue: central_nervous_system\", \"rankvar\": 9}, {\"group\": [5.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-43\", \"clust\": 4, \"cat_2_index\": 14, \"cat_1_index\": 44, \"cat_0_index\": 27, \"cat-2\": \"Max Pct: 0.5\", \"rank\": 42, \"cat-1\": \"number in clust: 42\", \"ini\": 7, \"cat-0\": \"Majority Tissue: large_intestine\", \"rankvar\": 37}, {\"group\": [23.0, 13.0, 7.0, 4.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-44\", \"clust\": 22, \"cat_2_index\": 46, \"cat_1_index\": 7, \"cat_0_index\": 6, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 48, \"cat-1\": \"number in clust: 1\", \"ini\": 6, \"cat-0\": \"Majority Tissue: breast\", \"rankvar\": 30}, {\"group\": [21.0, 11.0, 5.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-45\", \"clust\": 20, \"cat_2_index\": 47, \"cat_1_index\": 8, \"cat_0_index\": 47, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 23, \"cat-1\": \"number in clust: 1\", \"ini\": 5, \"cat-0\": \"Majority Tissue: stomach\", \"rankvar\": 29}, {\"group\": [33.0, 18.0, 10.0, 6.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-46\", \"clust\": 35, \"cat_2_index\": 25, \"cat_1_index\": 26, \"cat_0_index\": 44, \"cat-2\": \"Max Pct: 0.894736842105\", \"rank\": 9, \"cat-1\": \"number in clust: 19\", \"ini\": 4, \"cat-0\": \"Majority Tissue: skin\", \"rankvar\": 24}, {\"group\": [38.0, 21.0, 12.0, 7.0, 4.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-47\", \"clust\": 42, \"cat_2_index\": 48, \"cat_1_index\": 37, \"cat_0_index\": 22, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 3, \"cat-1\": \"number in clust: 34\", \"ini\": 3, \"cat-0\": \"Majority Tissue: haematopoietic_and_lymphoid_tissue\", \"rankvar\": 43}, {\"group\": [50.0, 31.0, 18.0, 11.0, 6.0, 3.0, 2.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-48\", \"clust\": 49, \"cat_2_index\": 49, \"cat_1_index\": 14, \"cat_0_index\": 37, \"cat-2\": \"Max Pct: 1.0\", \"rank\": 17, \"cat-1\": \"number in clust: 2\", \"ini\": 2, \"cat-0\": \"Majority Tissue: lung\", \"rankvar\": 46}, {\"group\": [13.0, 5.0, 3.0, 2.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0], \"name\": \"Cluster: cluster-49\", \"clust\": 16, \"cat_2_index\": 7, \"cat_1_index\": 47, \"cat_0_index\": 38, \"cat-2\": \"Max Pct: 0.413333333333\", \"rank\": 44, \"cat-1\": \"number in clust: 75\", \"ini\": 1, \"cat-0\": \"Majority Tissue: lung\", \"rankvar\": 17}]}, \"dist\": \"cos\"}]}", "viz_title": "updating python by restarting kernel" } } }, "version_major": 1, "version_minor": 0 } } }, "nbformat": 4, "nbformat_minor": 1 }