{ "cells": [ { "cell_type": "code", "execution_count": 1, "metadata": { "collapsed": false, "deletable": true, "editable": true }, "outputs": [ { "data": { "application/vnd.jupyter.widget-view+json": { "model_id": "75edaf242bc740dcafbcf5d61010dab7" } }, "metadata": {}, "output_type": "display_data" } ], "source": [ "from clustergrammer_widget import *\n", "net = Network()\n", "net.load_file('rc_two_cats.txt')\n", "net.make_clust()\n", "clustergrammer_widget(network=net.export_net_json())" ] }, { "cell_type": "code", "execution_count": 2, "metadata": { "collapsed": false, "deletable": true, "editable": true }, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "(6, 0, 0, 'beta6')\n" ] } ], "source": [ "# checking ipywidgets version\n", "import ipywidgets as widgets\n", "print(widgets.version_info)" ] }, { "cell_type": "code", "execution_count": null, "metadata": { "collapsed": true, "deletable": true, "editable": true }, "outputs": [], "source": [] } ], "metadata": { "anaconda-cloud": {}, "kernelspec": { "display_name": "Python [py35]", "language": "python", "name": "Python [py35]" }, "language_info": { "codemirror_mode": { "name": "ipython", "version": 3 }, "file_extension": ".py", "mimetype": "text/x-python", "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", "version": "3.5.2" }, "widgets": { "application/vnd.jupyter.widget-state+json": { "state": { "152091e6df4b4e9594473a28587ddfa3": { "model_module": "jupyter-js-widgets", "model_module_version": "*", "model_name": "LayoutModel", "state": { "_model_module_version": "*", "_view_module_version": "*" } }, "75edaf242bc740dcafbcf5d61010dab7": { "model_module": "clustergrammer_widget", "model_module_version": "*", "model_name": "hello_model", "state": { "_dom_classes": [], "_model_module_version": "*", "_view_module_version": "*", "layout": "IPY_MODEL_152091e6df4b4e9594473a28587ddfa3", "msg_throttle": 1, "network": "{\"links\": [{\"source\": 0, \"value\": -0.792803571, 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5.0, 2.0, 1.0, 1.0, 1.0]}, {\"cat_1_index\": 5, \"rank\": 14, \"ini\": 3, \"cat-1\": \"Gender: Female\", \"cat_0_index\": 7, \"clust\": 3, \"name\": \"Cell Line: HCC44\", \"rankvar\": 2, \"cat-0\": \"Category: four\", \"group\": [2.0, 2.0, 2.0, 2.0, 2.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0]}, {\"cat_1_index\": 22, \"rank\": 21, \"ini\": 2, \"cat-1\": \"Gender: Male\", \"cat_0_index\": 8, \"clust\": 9, \"name\": \"Cell Line: A549\", \"rankvar\": 3, \"cat-0\": \"Category: four\", \"group\": [8.0, 8.0, 8.0, 8.0, 6.0, 5.0, 3.0, 1.0, 1.0, 1.0, 1.0]}, {\"cat_1_index\": 8, \"rank\": 13, \"ini\": 1, \"cat-1\": \"Gender: Female\", \"cat_0_index\": 18, \"clust\": 28, \"name\": \"Cell Line: H1781\", \"rankvar\": 13, \"cat-0\": \"Category: one\", \"group\": [25.0, 25.0, 25.0, 24.0, 19.0, 15.0, 8.0, 4.0, 1.0, 1.0, 1.0]}]}", "viz_title": "updating python by restarting kernel" } } }, "version_major": 1, "version_minor": 0 } } }, "nbformat": 4, "nbformat_minor": 1 }