/**
 Radial movement analyzer. 

(c) 2022, INSERM
written by Volker Baecker at Montpellier Ressources Imagerie, Biocampus Montpellier, INSERM, CNRS, University of Montpellier (www.mri.cnrs.fr)

The tool takes a results table of tracking data (as created by Trackmate) and calculates the difference of the distances between the start point of a track and a given point c
and the end point of the track and c, i.e. how much the particle has moved away from c (negative it moved towards c).

If a particle moves away from the given point the result will be positive, if it moves towards the given point the result will be negative.
If neither of the above is the case, the result will be near zero.
*/

var DISPLAY_PLOT = true;

var helpURL = "https://github.com/MontpellierRessourcesImagerie/imagej_macros_and_scripts/wiki/Radial_Movement_Tool";

macro "Radial Movement Tool Help [f4]" {
    run('URL...', 'url='+helpURL);
}

macro "Radial Movement Tool Help (f4) Action Tool - CfffL00f0L0161CeeeD71CfffL81f1L0262C333D72CfffL82f2L0313CaaaD23C666D33CeeeD43CfffD53CdddD63CbbbD83CfffL93a3CaaaDb3C777Dc3CfffLd3f3L0424C222D34CeeeD54CbbbD64D84CfffD94C333Da4CbbbDc4CfffLd4f4L0525CaaaD35C333D45C666D55CfffD65D85C888D95C333Da5C666Db5CfffLc5f5L0646C333D56CbbbD66CcccD86C444D96CfffDa6CeeeDb6CfffLc6f6D07CdddD17C666D27C444D37CaaaL4757CfffD67CbbbD77CfffD87C888D97C666Da7C222Db7C333Dc7CaaaDd7CfffLe7f7D08C888D18C222L2838C666D48CaaaD58CfffD68CeeeD78CfffD88CbbbD98CaaaDa8C444Lb8c8CbbbDd8CfffLe8f8L0929CeeeD39CfffD49C777D59CfffD69CcccD89C666D99CfffLa9f9L0a2aCbbbD3aC444D4aC666D5aCfffD6aD8aC333D9aC777DaaCdddDbaCfffLcafaL0b1bCdddD2bC444D4bCfffD5bCdddD6bCcccL8b9bC444DbbCfffLcbfbL0c1cC444D2cC666D3cCbbbD4cCfffD5cCbbbD6cCaaaD8cCfffD9cC888DacC222DbcCeeeDccCfffLdcfcL0d1dCdddD2dCfffL3d6dC222D7dCfffL8dbdCdddDcdCfffLddfdL0e6eCcccD7eCfffL8efeL0fff"{
    run('URL...', 'url='+helpURL);
}


macro "calculate radial movement (f5) Action Tool - C000T4b12d" {
    calculateRadialMovement();
}

macro "calculate radial movement [f5]" {
    calculateRadialMovement();
}

macro "calculate radial movement (f5) Action Tool Options" {
    Dialog.create("calculate radial movement options");
    Dialog.addCheckbox("display plot", DISPLAY_PLOT);
    Dialog.show();
    DISPLAY_PLOT = Dialog.getCheckbox();
}

function calculateRadialMovement() {
    table = Table.title
    macrosDir = getDirectory("macros");
    script = File.openAsString(macrosDir + "/toolsets/radial_movement_analyzer.py");
    plotParam = "false";
    if (DISPLAY_PLOT)
        plotParam = "true";
    parameter = "table="+table+",plot="+plotParam;
    call("ij.plugin.Macro_Runner.runPython", script, parameter);      
}