Validation Log 2025-12-14 21:06:24.870606 mwtab Python Library Version: 2.0.0 Source: https://www.metabolomicsworkbench.org/rest/study/analysis_id/AN000144/mwtab/txt Study ID: ST000090 Analysis ID: AN000144 File format: txt Status: Contains Validation Issues Number of Issues: 19 Number of Warnings: 6 Number of Value Errors: 10 Number of Consistency Errors: 1 Number of Format Errors: 6 Issue Log: Error: An empty value or a null value was detected for the subsection, "ADDRESS", in the "PROJECT" section. A legitimate value should be provided for this required subsection. Error: An empty value or a null value was detected for the subsection, "PHONE", in the "STUDY" section. A legitimate value should be provided for this required subsection. Error: An empty value or a null value was detected for the subsection, "COLLECTION_SUMMARY", in the "COLLECTION" section. A legitimate value should be provided for this required subsection. Error: An empty value or a null value was detected for the subsection, "TREATMENT_SUMMARY", in the "TREATMENT" section. A legitimate value should be provided for this required subsection. Error: An empty value or a null value was detected for the subsection, "SAMPLEPREP_SUMMARY", in the "SAMPLEPREP" section. A legitimate value should be provided for this required subsection. Error: An empty value or a null value was detected for the subsection, "MS_COMMENTS", in the "MS" section. Either a legitimate value should be provided for this subsection, or it should be removed altogether. Error: The required property, "FLOW_GRADIENT", in the "CHROMATOGRAPHY" section is missing. Error: The required property, "FLOW_RATE", in the "CHROMATOGRAPHY" section is missing. Error: The required property, "COLUMN_TEMPERATURE", in the "CHROMATOGRAPHY" section is missing. Error: The required property, "SOLVENT_A", in the "CHROMATOGRAPHY" section is missing. Error: The required property, "SOLVENT_B", in the "CHROMATOGRAPHY" section is missing. Warning: There are duplicate samples in the MS_METABOLITE_DATA section. Error: The following metabolites in the, MS_METABOLITE_DATA table were not found in the METABOLITES table: "Factors" Warning: The "KEGG_ID" column at position 3 in the METABOLITES table, matches a standard column name, "kegg_id", and some of the values in the column do not match the expected type or format for that column. The non-matching values are: 40 BOCASN Warning: The "Local_ID" column at position 2 in the METABOLITES table, matches a standard column name, "other_id". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name. Warning: The column "Local_ID" was found in the METABOLITES table, but this column implies that another column, "other_id_type", should also exist, and that column was not found. Warning: The standard column, "other_id", was found in the METABOLITES table as "Local_ID". If this column contains database IDs for standard databases such as KEGG, PubChem, HMDB, etc., it is recommended to make individual columns for these and not lump them together into a less descriptive "other_id" column. Warning: There is a metabolite name, "Factors", in the METABOLITE_DATA table that is probably wrong. It is close to a header name and is likely due to a badly constructed Tab file. Error: The MS_METABOLITE_DATA table does not have a column for "Samples". It is likely misspelled or using a common incorrect substitute.